Query 009685
Match_columns 528
No_of_seqs 476 out of 1886
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 10:45:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009685.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009685hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 3.5E-23 1.2E-27 193.1 16.2 138 10-148 6-150 (169)
2 4b93_B Ankyrin repeat domain-c 99.9 8.4E-24 2.9E-28 211.0 12.5 143 1-144 79-228 (269)
3 2rfm_A Putative ankyrin repeat 99.9 8.5E-23 2.9E-27 191.1 14.0 148 1-149 28-182 (192)
4 4gpm_A Engineered protein OR26 99.9 2.8E-22 9.5E-27 187.0 14.4 128 1-129 30-164 (169)
5 1yyh_A HN1;, notch 1, ankyrin 99.9 7.3E-22 2.5E-26 193.1 17.0 146 4-150 53-239 (253)
6 3hra_A Ankyrin repeat family p 99.9 1E-21 3.4E-26 183.9 16.0 148 1-149 32-193 (201)
7 4hbd_A KN motif and ankyrin re 99.9 6E-22 2E-26 197.6 14.4 149 1-150 104-266 (276)
8 1awc_B Protein (GA binding pro 99.9 1.1E-21 3.9E-26 177.0 14.6 141 8-149 2-148 (153)
9 1oy3_D Transcription factor in 99.9 8.4E-22 2.9E-26 193.2 14.8 85 60-145 151-236 (282)
10 3v31_A Ankyrin repeat family A 99.9 2E-21 6.8E-26 177.4 15.2 143 7-150 2-151 (167)
11 1d9s_A Cyclin-dependent kinase 99.9 8.8E-22 3E-26 174.7 10.8 120 1-148 5-125 (136)
12 2f8y_A Notch homolog 1, transl 99.9 7E-21 2.4E-25 181.1 17.2 145 4-149 21-173 (223)
13 3aji_A 26S proteasome non-ATPa 99.9 3.8E-21 1.3E-25 183.9 15.3 147 2-149 34-187 (231)
14 2rfa_A Transient receptor pote 99.9 4.8E-21 1.6E-25 183.6 15.8 147 2-148 31-211 (232)
15 2dzn_A Probable 26S proteasome 99.9 1.7E-21 5.7E-26 185.7 12.5 148 2-150 30-190 (228)
16 1ikn_D Protein (I-kappa-B-alph 99.9 1.1E-21 3.8E-26 189.1 11.3 148 1-149 38-199 (236)
17 3c5r_A BARD-1, BRCA1-associate 99.9 1.6E-21 5.6E-26 172.7 11.1 120 3-149 5-124 (137)
18 2etb_A Transient receptor pote 99.9 1.2E-21 4.1E-26 191.2 11.1 145 4-149 39-236 (256)
19 3aji_A 26S proteasome non-ATPa 99.9 7.3E-21 2.5E-25 181.9 16.2 136 8-144 6-149 (231)
20 2y1l_E Darpin-8.4; hydrolase-i 99.9 5.9E-21 2E-25 175.4 14.9 144 5-149 11-161 (169)
21 2xai_A ASB-9, ankyrin repeat a 99.9 2.5E-21 8.6E-26 190.4 13.1 146 1-149 29-181 (261)
22 1yyh_A HN1;, notch 1, ankyrin 99.9 6.3E-21 2.1E-25 186.5 15.8 137 12-149 27-172 (253)
23 2dzn_A Probable 26S proteasome 99.9 9.5E-21 3.3E-25 180.5 16.2 140 8-148 2-154 (228)
24 1sw6_A Regulatory protein SWI6 99.8 1.8E-21 6.1E-26 198.8 11.8 142 1-143 123-325 (327)
25 1oy3_D Transcription factor in 99.8 5.6E-21 1.9E-25 187.3 14.4 147 1-148 2-206 (282)
26 1s70_B 130 kDa myosin-binding 99.8 5.2E-21 1.8E-25 190.1 14.3 141 2-142 67-273 (299)
27 3v30_A DNA-binding protein rfx 99.8 4E-21 1.4E-25 176.3 12.2 142 8-150 2-151 (172)
28 1k1a_A B-cell lymphoma 3-encod 99.8 1.6E-20 5.6E-25 180.1 17.1 144 2-146 40-195 (241)
29 1bi7_B P16INK4A, MTS1, multipl 99.8 1.5E-21 5.1E-26 177.3 9.2 137 2-140 6-150 (156)
30 2f8y_A Notch homolog 1, transl 99.8 1.9E-20 6.5E-25 178.1 17.0 148 1-149 51-206 (223)
31 3aaa_C Myotrophin, protein V-1 99.8 3.7E-21 1.3E-25 167.5 10.9 116 4-146 3-118 (123)
32 3b7b_A Euchromatic histone-lys 99.8 6.5E-21 2.2E-25 183.0 13.4 149 1-150 37-193 (237)
33 3v30_A DNA-binding protein rfx 99.8 1.1E-20 3.8E-25 173.3 14.1 136 1-137 29-171 (172)
34 2rfa_A Transient receptor pote 99.8 1.4E-20 4.8E-25 180.4 15.4 143 7-150 2-170 (232)
35 1ihb_A P18-INK4C(INK6), cyclin 99.8 6.9E-21 2.3E-25 172.4 12.5 142 6-149 3-152 (162)
36 1k1a_A B-cell lymphoma 3-encod 99.8 7.2E-21 2.5E-25 182.5 13.2 150 1-150 72-232 (241)
37 2xai_A ASB-9, ankyrin repeat a 99.8 2.5E-20 8.4E-25 183.4 16.8 141 7-149 2-149 (261)
38 3f6q_A Integrin-linked protein 99.8 1.2E-20 4E-25 174.8 13.1 141 6-147 3-151 (179)
39 3b7b_A Euchromatic histone-lys 99.8 3.2E-20 1.1E-24 178.1 16.2 148 1-149 4-159 (237)
40 2jab_A H10-2-G3; HER2, darpin, 99.8 1.2E-20 4.1E-25 167.4 12.0 118 5-149 11-128 (136)
41 3d9h_A CDNA FLJ77766, highly s 99.8 1.4E-20 4.9E-25 188.0 13.9 146 1-149 85-237 (285)
42 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.7E-20 5.9E-25 169.0 12.2 139 8-149 2-148 (156)
43 1ycs_B 53BP2, P53BP2; ankyrin 99.8 3.8E-21 1.3E-25 187.2 8.4 136 5-141 2-144 (239)
44 3ljn_A Hypothetical protein; a 99.8 1.7E-20 5.7E-25 192.7 13.7 147 1-149 46-226 (364)
45 3twr_A Tankyrase-2; ankyrin re 99.8 2.2E-20 7.5E-25 170.1 12.7 139 4-143 4-150 (165)
46 1n11_A Ankyrin; clathrin, BAND 99.8 4.1E-20 1.4E-24 194.1 16.3 144 2-146 239-389 (437)
47 3utm_A Tankyrase-1; tankyrase, 99.8 9.5E-20 3.2E-24 183.6 17.4 96 1-97 51-153 (351)
48 3d9h_A CDNA FLJ77766, highly s 99.8 7.6E-20 2.6E-24 182.8 16.4 146 2-149 53-205 (285)
49 3kea_A K1L; tropism, ANK repea 99.8 1.5E-20 5.1E-25 188.2 10.8 146 1-149 24-176 (285)
50 1n0q_A 3ANK, 3 ankyrin repeats 99.8 5.3E-20 1.8E-24 152.8 12.3 93 7-126 1-93 (93)
51 3jxi_A Vanilloid receptor-rela 99.8 9E-21 3.1E-25 185.1 8.7 144 5-149 43-240 (260)
52 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.1E-19 3.6E-24 156.6 14.2 115 7-148 1-115 (126)
53 2etb_A Transient receptor pote 99.8 5.9E-20 2E-24 179.1 13.2 136 7-143 1-181 (256)
54 3utm_A Tankyrase-1; tankyrase, 99.8 8.3E-20 2.8E-24 184.0 14.7 84 57-141 237-320 (351)
55 1wdy_A 2-5A-dependent ribonucl 99.8 3E-19 1E-23 174.3 17.4 144 2-146 66-231 (285)
56 2pnn_A Transient receptor pote 99.8 5.3E-20 1.8E-24 181.4 11.6 146 4-149 50-248 (273)
57 1n11_A Ankyrin; clathrin, BAND 99.8 1.6E-19 5.5E-24 189.6 15.4 147 1-148 7-160 (437)
58 3ljn_A Hypothetical protein; a 99.8 6.2E-20 2.1E-24 188.4 11.9 145 2-149 14-188 (364)
59 3v31_A Ankyrin repeat family A 99.8 1.9E-19 6.4E-24 164.3 13.7 126 1-127 29-161 (167)
60 3ehr_A Osteoclast-stimulating 99.8 1.7E-20 5.9E-25 179.6 7.0 119 4-149 69-188 (222)
61 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.5E-19 5E-24 163.6 12.7 124 1-126 31-162 (162)
62 2y1l_E Darpin-8.4; hydrolase-i 99.8 2.7E-19 9.3E-24 164.2 14.4 123 1-124 40-169 (169)
63 1ikn_D Protein (I-kappa-B-alph 99.8 3.2E-20 1.1E-24 178.8 8.5 146 2-148 2-165 (236)
64 2l6b_A NR1C; ankyrin, consensu 99.8 5.2E-20 1.8E-24 158.1 8.9 109 3-138 4-112 (115)
65 2fo1_E LIN-12 protein; beta-ba 99.8 2E-19 6.9E-24 186.7 14.8 148 1-149 159-328 (373)
66 1s70_B 130 kDa myosin-binding 99.8 1.9E-19 6.5E-24 178.8 13.8 143 5-148 37-246 (299)
67 2rfm_A Putative ankyrin repeat 99.8 4E-19 1.4E-23 166.0 14.7 123 1-124 61-190 (192)
68 3deo_A Signal recognition part 99.8 7.6E-20 2.6E-24 170.5 9.4 112 5-144 41-153 (183)
69 4b93_B Ankyrin repeat domain-c 99.8 1.6E-19 5.4E-24 180.0 12.2 146 2-148 46-199 (269)
70 1wdy_A 2-5A-dependent ribonucl 99.8 1E-18 3.5E-23 170.5 16.7 144 2-146 32-194 (285)
71 3t8k_A Uncharacterized protein 99.8 2.8E-20 9.4E-25 176.0 5.0 91 57-148 65-168 (186)
72 2pnn_A Transient receptor pote 99.8 2.1E-19 7.1E-24 177.2 11.2 143 2-145 7-195 (273)
73 2fo1_E LIN-12 protein; beta-ba 99.8 3.3E-19 1.1E-23 185.0 12.9 148 1-149 192-361 (373)
74 2vge_A RELA-associated inhibit 99.8 7.5E-19 2.6E-23 170.9 14.4 113 2-141 15-128 (229)
75 4g8k_A 2-5A-dependent ribonucl 99.8 8.2E-19 2.8E-23 178.1 15.1 140 3-148 163-315 (337)
76 3kea_A K1L; tropism, ANK repea 99.8 2.4E-19 8.2E-24 179.3 10.1 140 7-148 61-209 (285)
77 3eu9_A Huntingtin-interacting 99.8 1.7E-18 5.9E-23 164.9 15.4 145 1-145 2-153 (240)
78 3hra_A Ankyrin repeat family p 99.8 2.1E-18 7.2E-23 161.2 15.7 140 5-145 2-151 (201)
79 3ui2_A Signal recognition part 99.8 1.8E-19 6.1E-24 176.5 8.6 111 5-143 42-153 (244)
80 1awc_B Protein (GA binding pro 99.8 1.5E-18 5.2E-23 156.4 14.0 116 4-120 30-152 (153)
81 3eu9_A Huntingtin-interacting 99.8 1.6E-18 5.6E-23 165.1 14.2 148 1-149 35-192 (240)
82 3twr_A Tankyrase-2; ankyrin re 99.8 8.5E-19 2.9E-23 159.6 11.3 106 42-148 10-122 (165)
83 3f6q_A Integrin-linked protein 99.8 1.9E-18 6.5E-23 159.8 13.3 107 41-148 6-119 (179)
84 3jxi_A Vanilloid receptor-rela 99.8 4.9E-19 1.7E-23 172.7 9.5 139 5-144 2-186 (260)
85 4g8k_A 2-5A-dependent ribonucl 99.8 4.8E-18 1.6E-22 172.5 16.9 144 1-145 51-213 (337)
86 2jab_A H10-2-G3; HER2, darpin, 99.8 2.5E-18 8.7E-23 152.3 12.7 97 1-124 40-136 (136)
87 1bd8_A P19INK4D CDK4/6 inhibit 99.8 2.3E-18 7.8E-23 155.0 12.2 120 1-123 29-155 (156)
88 1d9s_A Cyclin-dependent kinase 99.8 1E-18 3.5E-23 154.9 8.6 98 1-126 38-136 (136)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.7 1.3E-17 4.4E-22 143.5 13.2 99 1-126 28-126 (126)
90 2b0o_E UPLC1; arfgap, structur 99.7 6.9E-18 2.4E-22 171.2 11.1 131 8-145 151-297 (301)
91 1ycs_B 53BP2, P53BP2; ankyrin 99.7 1.7E-18 5.8E-23 168.4 6.3 127 5-132 34-170 (239)
92 1dcq_A PYK2-associated protein 99.7 1.8E-17 6E-22 166.2 13.0 98 2-126 163-263 (278)
93 2zgd_A 3 repeat synthetic anky 99.7 1.5E-17 5E-22 142.8 10.4 92 2-120 18-109 (110)
94 2vge_A RELA-associated inhibit 99.7 2.4E-18 8.3E-23 167.3 5.8 113 1-140 47-162 (229)
95 1dcq_A PYK2-associated protein 99.7 8.3E-17 2.9E-21 161.3 14.5 120 9-149 131-253 (278)
96 4hbd_A KN motif and ankyrin re 99.7 3.1E-17 1.1E-21 163.4 11.2 123 1-124 138-273 (276)
97 3lvq_E ARF-GAP with SH3 domain 99.7 4E-17 1.4E-21 176.3 12.3 105 5-142 168-275 (497)
98 3jue_A Arfgap with coiled-coil 99.7 4.7E-17 1.6E-21 170.2 12.0 116 7-149 198-316 (368)
99 3ehr_A Osteoclast-stimulating 99.7 2.8E-17 9.4E-22 157.2 6.7 108 1-134 99-206 (222)
100 3lvq_E ARF-GAP with SH3 domain 99.7 1.4E-16 4.9E-21 172.0 12.5 120 9-149 133-255 (497)
101 3aaa_C Myotrophin, protein V-1 99.7 3.4E-16 1.2E-20 135.9 11.0 83 1-110 33-115 (123)
102 1sw6_A Regulatory protein SWI6 99.6 7.1E-17 2.4E-21 164.7 6.1 137 1-143 45-210 (327)
103 3jue_A Arfgap with coiled-coil 99.6 5.3E-16 1.8E-20 162.2 12.7 99 1-126 226-326 (368)
104 3c5r_A BARD-1, BRCA1-associate 99.6 5.2E-17 1.8E-21 143.6 4.1 97 1-124 36-132 (137)
105 3deo_A Signal recognition part 99.6 6.4E-16 2.2E-20 143.9 11.5 106 1-150 69-175 (183)
106 3ui2_A Signal recognition part 99.6 6.2E-16 2.1E-20 151.2 11.2 106 1-149 70-175 (244)
107 3t8k_A Uncharacterized protein 99.6 7.7E-17 2.6E-21 152.2 4.6 126 2-128 31-181 (186)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.6 7.4E-16 2.5E-20 127.6 10.0 83 67-149 1-83 (93)
109 1bi7_B P16INK4A, MTS1, multipl 99.6 1.7E-15 5.9E-20 137.1 7.9 107 40-148 12-125 (156)
110 2aja_A Ankyrin repeat family p 99.5 1.6E-15 5.6E-20 158.9 3.4 119 5-148 89-213 (376)
111 2zgd_A 3 repeat synthetic anky 99.5 1.4E-14 4.9E-19 124.0 8.7 89 60-149 17-105 (110)
112 2l6b_A NR1C; ankyrin, consensu 99.5 3.2E-14 1.1E-18 121.7 6.7 85 63-148 5-89 (115)
113 2b0o_E UPLC1; arfgap, structur 99.5 8.4E-14 2.9E-18 141.0 10.0 92 57-149 174-274 (301)
114 2aja_A Ankyrin repeat family p 99.5 1.9E-15 6.5E-20 158.4 -2.9 114 3-148 123-239 (376)
115 3zrh_A Ubiquitin thioesterase 26.0 1.7E+02 0.0057 30.6 7.8 62 15-89 29-90 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.90 E-value=3.5e-23 Score=193.15 Aligned_cols=138 Identities=16% Similarity=0.182 Sum_probs=124.7
Q ss_pred hHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHHcCCHH
Q 009685 10 SPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLRDPI 82 (528)
Q Consensus 10 TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~~G~~e 82 (528)
++|+.||..|+.++|+.||++|++++..+. +.++++.++..+....+ |++++.+|. .|+||||+|+..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~-~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhcc-CCCCHHHHHHHcCCHH
Confidence 479999999999999999999999998554 56777666666655444 899999997 9999999999999999
Q ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhh
Q 009685 83 SAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 83 ~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|+||+++|+..+..+
T Consensus 85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~ 150 (169)
T 4gpm_A 85 VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEE 150 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999876544
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.90 E-value=8.4e-24 Score=211.01 Aligned_cols=143 Identities=17% Similarity=0.147 Sum_probs=129.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|.+|+||||+||..|+.+++++||+.|++++.... ..++++.++..+...++ |+++|.+|. .|+||||
T Consensus 79 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~-~g~TpL~ 157 (269)
T 4b93_B 79 VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDL-SGNTPLI 157 (269)
T ss_dssp TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TCCCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCC-CCCCHHH
Confidence 578899999999999999999999999999999988554 46666666555555443 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHh
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAA 144 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~ 144 (528)
+||..|+.+++++||++|++++.++..|+||||+|+..|+.+++++|+++|++++..|..|+||+++|+..
T Consensus 158 ~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 228 (269)
T 4b93_B 158 YACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQN 228 (269)
T ss_dssp HHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTT
T ss_pred HHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999743
No 3
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.89 E-value=8.5e-23 Score=191.08 Aligned_cols=148 Identities=13% Similarity=0.084 Sum_probs=133.4
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|.+|..|.||||+||..|+.+++++|++.|++++..+. ..++++.++..++.+++ |++++.+|. .|.||||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 106 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF-SGKTPLM 106 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TSCCHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHH
Confidence 367899999999999999999999999999999987544 56777776666665544 899999997 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+.
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 182 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEV 182 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998765543
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.88 E-value=2.8e-22 Score=187.01 Aligned_cols=128 Identities=18% Similarity=0.224 Sum_probs=112.5
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|.+|.+|.||||+|+..++.+++++|++.|++++..+. +.++++.++..++.+++ |+++|.+|. .|+||||
T Consensus 30 vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~-~G~TpLh 108 (169)
T 4gpm_A 30 VNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLH 108 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCC-CCCCHHH
Confidence 578999999999999999999999999999999998554 57777777776666554 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhH
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAW 129 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~ 129 (528)
+||..|+.+++++|+++||+++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 109 ~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 109 HAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred HHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999998764
No 5
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.88 E-value=7.3e-22 Score=193.14 Aligned_cols=146 Identities=18% Similarity=0.188 Sum_probs=79.2
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhcccc---------------------------
Q 009685 4 FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADA--------------------------- 55 (528)
Q Consensus 4 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~--------------------------- 55 (528)
.|..|.||||+||..|+.+++++|+++|++++..+. ..++++.++..++.++
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 132 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA 132 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHH
Confidence 355566666666666666666666666655554322 2344433333333222
Q ss_pred -------c------cccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Q 009685 56 -------V------SAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIAR 122 (528)
Q Consensus 56 -------v------ga~In~kD~p~G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~ 122 (528)
+ |++++.+|. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 133 ~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 211 (253)
T 1yyh_A 133 RLAVEGMLEDLINSHADVNAVDD-LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLD 211 (253)
T ss_dssp HHTCSSHHHHHHHTTCCTTCBCT-TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HcChHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 2 455555554 55555555555555555555555555555555555555555555555555555555
Q ss_pred hcCChhHHhhcCCchHHHHHHhhhhhHH
Q 009685 123 HYQPLAWAKWCRRLPRIVASAARIRDFY 150 (528)
Q Consensus 123 ~ga~i~~~~~~g~tPl~lA~l~~~~Df~ 150 (528)
+|++++..+..|.||+++|+..+..+..
T Consensus 212 ~ga~~~~~d~~g~tpl~~A~~~g~~~i~ 239 (253)
T 1yyh_A 212 HFANRDITDHMDRLPRDIAQERMHHDIV 239 (253)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred cCCCccccccCCCCHHHHHHHcCCHHHH
Confidence 5555555555555555555555544443
No 6
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.87 E-value=1e-21 Score=183.94 Aligned_cols=148 Identities=16% Similarity=0.208 Sum_probs=131.0
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc-------cccccccCCCCCCcHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV-------SAVIDRRDVPGRETPL 72 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v-------ga~In~kD~p~G~TPL 72 (528)
+|..|.+|.||||+||..|+.+++++|+++|++++..+. ..++++.++..++.+++ +++++..|. .|.|||
T Consensus 32 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L 110 (201)
T 3hra_A 32 VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNR-YGGNAL 110 (201)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCT-TSCCSH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccC-CCCcHH
Confidence 467889999999999999999999999999999987554 46777666666655544 678899997 899999
Q ss_pred HHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCC-----HHHHHHHHHhcCChhHHhhcCCchHHHHHHhhh
Q 009685 73 HLAVRLRDPISAEILMAAG-ADWSLQNENGWSALQEAVCTRE-----ESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 73 HlAa~~G~~e~VklLL~~G-Advn~~n~~G~TpLh~A~~~g~-----~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~ 146 (528)
|+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++ .+++++|+++|++++..+..|.||+++|+..+.
T Consensus 111 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 190 (201)
T 3hra_A 111 IPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGY 190 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC
Confidence 9999999999999999999 9999999999999999999998 999999999999999999999999999998765
Q ss_pred hhH
Q 009685 147 RDF 149 (528)
Q Consensus 147 ~Df 149 (528)
.+.
T Consensus 191 ~~~ 193 (201)
T 3hra_A 191 TEI 193 (201)
T ss_dssp HHH
T ss_pred HhH
Confidence 554
No 7
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.87 E-value=6e-22 Score=197.60 Aligned_cols=149 Identities=16% Similarity=0.163 Sum_probs=129.4
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCC-CCCcCCC-CCchhhHHH-----HHhccccc------cccccccCCCC
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLP-RLSKAGE-VNTEDESLA-----AELQADAV------SAVIDRRDVPG 67 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga-~v~~~~~-~~t~l~~~A-----~~~~~~~v------ga~In~kD~p~ 67 (528)
+|..|.+|.||||+||..|+.+++++||+.|+ +++..+. +.++++.++ ..+....+ |+.++..|. .
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~-~ 182 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQ-A 182 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTT-T
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCC-C
Confidence 47789999999999999999999999999998 8887554 456665554 22222222 777888887 8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH-hcCChhHHhhcCCchHHHHHHhhh
Q 009685 68 RETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIAR-HYQPLAWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 68 G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~-~ga~i~~~~~~g~tPl~lA~l~~~ 146 (528)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++ .|++++..+..|.||+++|+..+.
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~ 262 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQ 262 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999999 899999999999999999998776
Q ss_pred hhHH
Q 009685 147 RDFY 150 (528)
Q Consensus 147 ~Df~ 150 (528)
.+..
T Consensus 263 ~~iv 266 (276)
T 4hbd_A 263 SEIA 266 (276)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 8
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.87 E-value=1.1e-21 Score=177.01 Aligned_cols=141 Identities=14% Similarity=0.048 Sum_probs=128.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHHcCCH
Q 009685 8 AHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLRDP 81 (528)
Q Consensus 8 G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~~G~~ 81 (528)
..||||.|+..|+.+++++|++.|++++......++++.++..++.+.+ |++++.+|. .|+||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK-VDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT-TCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcChH
Confidence 4589999999999999999999999888766677888877777766554 889999997 899999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 82 ISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 82 e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+.
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i 148 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDL 148 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998765543
No 9
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.87 E-value=8.4e-22 Score=193.20 Aligned_cols=85 Identities=24% Similarity=0.258 Sum_probs=51.2
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchH
Q 009685 60 IDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNEN-GWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPR 138 (528)
Q Consensus 60 In~kD~p~G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~-G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl 138 (528)
++.+|. .|.||||+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.+++++|+++|++++.++..|.||+
T Consensus 151 ~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL 229 (282)
T 1oy3_D 151 LEAENY-DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPL 229 (282)
T ss_dssp TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCcCC-CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHH
Confidence 444554 5666666666666666666666666666665533 66666666666666666666666666666666666666
Q ss_pred HHHHHhh
Q 009685 139 IVASAAR 145 (528)
Q Consensus 139 ~lA~l~~ 145 (528)
++|+..+
T Consensus 230 ~~A~~~~ 236 (282)
T 1oy3_D 230 GSALLRP 236 (282)
T ss_dssp HHHHTSS
T ss_pred HHHHHcC
Confidence 6665444
No 10
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.86 E-value=2e-21 Score=177.44 Aligned_cols=143 Identities=20% Similarity=0.046 Sum_probs=128.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHHcC
Q 009685 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLR 79 (528)
Q Consensus 7 ~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~~G 79 (528)
.|.||||+||..|+.++++.|++.+++++..+. ..++++.++..++.+.+ |++++..|. .|.||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK-GRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcC
Confidence 578999999999999999999999999887554 46677666666665544 889999997 8999999999999
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhHH
Q 009685 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFY 150 (528)
Q Consensus 80 ~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df~ 150 (528)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+..
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 151 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQ 151 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999987765543
No 11
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.86 E-value=8.8e-22 Score=174.74 Aligned_cols=120 Identities=16% Similarity=0.140 Sum_probs=108.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~ 80 (528)
+|..|..|.||||+|+..|+.+++++|+++|+ +++.+|. .|+||||+|+. |+
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--------------------------~~~~~~~-~g~t~L~~A~~-~~ 56 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGA--------------------------DPNALNR-FGRRPIQVMMM-GS 56 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTC--------------------------CTTCCCT-TCCTTTTTSTT-SC
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCC--------------------------CcCCcCC-CCCCHHHHHHc-CC
Confidence 57889999999999999999999999999864 4666776 89999999999 99
Q ss_pred HHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhh
Q 009685 81 PISAEILMAAGADWSLQNEN-GWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 81 ~e~VklLL~~GAdvn~~n~~-G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+
T Consensus 57 ~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 125 (136)
T 1d9s_A 57 AQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRD 125 (136)
T ss_dssp HHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999 999999999999999999999999999999999999999998766444
No 12
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.86 E-value=7e-21 Score=181.08 Aligned_cols=145 Identities=19% Similarity=0.142 Sum_probs=112.5
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cc-cccccCCCCCCcHHHHH
Q 009685 4 FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SA-VIDRRDVPGRETPLHLA 75 (528)
Q Consensus 4 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga-~In~kD~p~G~TPLHlA 75 (528)
.|..|.||||+||..|+.+++++|+++|++++..+. ..++++.++..++.+++ +. +++..+. .|.||||+|
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A 99 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH-DGTTPLILA 99 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCT-TCCCHHHHH
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCCcHHHHH
Confidence 477888999999999999999998888888877544 45666665555554443 33 6777776 788888888
Q ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 76 VRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 76 a~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+.
T Consensus 100 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 173 (223)
T 2f8y_A 100 ARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYET 173 (223)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHH
Confidence 88888888888888888888888888888888888888888888888888888888888888888876654443
No 13
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.86 E-value=3.8e-21 Score=183.87 Aligned_cols=147 Identities=13% Similarity=0.066 Sum_probs=121.1
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHHH
Q 009685 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHL 74 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHl 74 (528)
+..|..|.||||+||..|+.+++++|+++|++++..+. ..++++.++..++.+.+ |++++.+|. .|.||||+
T Consensus 34 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~ 112 (231)
T 3aji_A 34 TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQ-NGCTPLHY 112 (231)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHH
T ss_pred hcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCC-CCCCHHHH
Confidence 45688899999999999999999999999888887544 46666666666555544 788888887 88899999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 75 AVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 75 Aa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..+.
T Consensus 113 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 187 (231)
T 3aji_A 113 AASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEE 187 (231)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHH
Confidence 999999999999999999988888889999999999999999999999888888888888899998887655443
No 14
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.86 E-value=4.8e-21 Score=183.59 Aligned_cols=147 Identities=16% Similarity=0.107 Sum_probs=82.8
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCC-----c-CCCCCchhhHHHHHhccccc------cccccccCC----
Q 009685 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLS-----K-AGEVNTEDESLAAELQADAV------SAVIDRRDV---- 65 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~-----~-~~~~~t~l~~~A~~~~~~~v------ga~In~kD~---- 65 (528)
|..|..|.||||+||..|+.+++++|+++|+++. . .....++++.++..++.+.+ |++++..+.
T Consensus 31 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~ 110 (232)
T 2rfa_A 31 HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVF 110 (232)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGG
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcce
Confidence 4455666666666666666666666666665541 1 11234455444444443333 455554431
Q ss_pred --------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHH----HHHHHhcCCh------
Q 009685 66 --------PGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIA----MIIARHYQPL------ 127 (528)
Q Consensus 66 --------p~G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv----klLL~~ga~i------ 127 (528)
..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++ ++|+++|++.
T Consensus 111 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~ 190 (232)
T 2rfa_A 111 HYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLE 190 (232)
T ss_dssp SCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGG
T ss_pred eecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhh
Confidence 0366666666666666666666666666666666666666666666666555 5666666554
Q ss_pred hHHhhcCCchHHHHHHhhhhh
Q 009685 128 AWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 128 ~~~~~~g~tPl~lA~l~~~~D 148 (528)
+..+..|.||+++|+..+..+
T Consensus 191 ~~~~~~g~tpl~~A~~~g~~~ 211 (232)
T 2rfa_A 191 LVPNNQGLTPFKLAGVEGNIV 211 (232)
T ss_dssp GCCCTTSCCHHHHHHHHTCHH
T ss_pred ccCCCCCCCHHHHHHHcCCHH
Confidence 345556666666666554433
No 15
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.86 E-value=1.7e-21 Score=185.74 Aligned_cols=148 Identities=14% Similarity=0.090 Sum_probs=128.1
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCC--c--CCCCCchhhHHHHHhccccc------c--ccccccCCCCCC
Q 009685 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLS--K--AGEVNTEDESLAAELQADAV------S--AVIDRRDVPGRE 69 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~--~--~~~~~t~l~~~A~~~~~~~v------g--a~In~kD~p~G~ 69 (528)
+..|..|.||||+|+..|+.+++++|+++|++++ . .....++++.++..++.+.+ | ++++..|. .|.
T Consensus 30 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~-~g~ 108 (228)
T 2dzn_A 30 LQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITN-QGV 108 (228)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCT-TCC
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCc-CCC
Confidence 3578999999999999999999999999995444 3 23456777777766665544 5 88888897 899
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhc-CChhHHhhcCCchHHHHHHhhhhh
Q 009685 70 TPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHY-QPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 70 TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~g-a~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++| ++++..+..|.||+|+|+..+..+
T Consensus 109 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~ 188 (228)
T 2dzn_A 109 TCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGD 188 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999876555
Q ss_pred HH
Q 009685 149 FY 150 (528)
Q Consensus 149 f~ 150 (528)
..
T Consensus 189 ~v 190 (228)
T 2dzn_A 189 AA 190 (228)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 16
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.86 E-value=1.1e-21 Score=189.11 Aligned_cols=148 Identities=18% Similarity=0.124 Sum_probs=118.9
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cc------cccccCCCC
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SA------VIDRRDVPG 67 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga------~In~kD~p~ 67 (528)
+|..|..|.||||+||..|+.+++++||++|++++..+. ..++++.++..++.+.+ ++ .++..|. .
T Consensus 38 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~-~ 116 (236)
T 1ikn_D 38 LNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY-N 116 (236)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCT-T
T ss_pred hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCC-C
Confidence 466788889999999999999999999998888887544 46666666666655443 32 2566776 7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhh
Q 009685 68 RETPLHLAVRLRDPISAEILMAAGADWSLQNE-NGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 68 G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~-~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~ 146 (528)
|.||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+.
T Consensus 117 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 196 (236)
T 1ikn_D 117 GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPS 196 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCc
Confidence 88999999999999999999999999988887 89999999999999999999999999888888889999998886655
Q ss_pred hhH
Q 009685 147 RDF 149 (528)
Q Consensus 147 ~Df 149 (528)
.+.
T Consensus 197 ~~~ 199 (236)
T 1ikn_D 197 TRI 199 (236)
T ss_dssp HHH
T ss_pred hHH
Confidence 443
No 17
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.85 E-value=1.6e-21 Score=172.75 Aligned_cols=120 Identities=14% Similarity=0.075 Sum_probs=111.0
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHH
Q 009685 3 DFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPI 82 (528)
Q Consensus 3 ~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~e 82 (528)
..|.+|.||||+||..|+.+++++|++.| ++++.+|. .|+||||+|+..|+.+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~~~~~~~ 57 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNG--------------------------SDPNVKDH-AGWTPLHEACNHGHLK 57 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTT--------------------------CCSCCCCT-TSCCHHHHHHHTTCHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCcCCC-CCCCHHHHHHHcCCHH
Confidence 46889999999999999999999999985 45667776 8999999999999999
Q ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 83 SAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 83 ~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....++
T Consensus 58 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~ 124 (137)
T 3c5r_A 58 VVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSL 124 (137)
T ss_dssp HHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHH
T ss_pred HHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999987665544
No 18
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.85 E-value=1.2e-21 Score=191.16 Aligned_cols=145 Identities=14% Similarity=0.042 Sum_probs=128.4
Q ss_pred CCCCCChHHHHHHHc---CCHHHHHHHHHhCCCCCcC------------CCCCchhhHHHHHhccccc------cccccc
Q 009685 4 FAKYAHSPVHLAVAR---RDYAALRRIIATLPRLSKA------------GEVNTEDESLAAELQADAV------SAVIDR 62 (528)
Q Consensus 4 ~D~~G~TPLH~Aa~~---G~~e~vk~LL~~ga~v~~~------------~~~~t~l~~~A~~~~~~~v------ga~In~ 62 (528)
.|..|.||||+||.. |+.+++++||++|++++.. ....++++.++..++.+++ |++++.
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 118 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 689999999999999 9999999999998877632 3467788777777766554 899999
Q ss_pred cCCCC-------------CCcHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCCcHHHHHHH--cCCHH-------HH
Q 009685 63 RDVPG-------------RETPLHLAVRLRDPISAEILMA---AGADWSLQNENGWSALQEAVC--TREES-------IA 117 (528)
Q Consensus 63 kD~p~-------------G~TPLHlAa~~G~~e~VklLL~---~GAdvn~~n~~G~TpLh~A~~--~g~~e-------iv 117 (528)
+|. . |.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+. .++.+ ++
T Consensus 119 ~~~-~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv 197 (256)
T 2etb_A 119 RAC-GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMY 197 (256)
T ss_dssp CCC-SGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred ccc-cccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHH
Confidence 886 5 9999999999999999999999 999999999999999999998 78888 99
Q ss_pred HHHHHhcCCh-------hHHhhcCCchHHHHHHhhhhhH
Q 009685 118 MIIARHYQPL-------AWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 118 klLL~~ga~i-------~~~~~~g~tPl~lA~l~~~~Df 149 (528)
++|+++|+++ +..+..|.||+++|+..+..+.
T Consensus 198 ~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 198 DGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp HHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 9999999999 8889999999999998765544
No 19
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.85 E-value=7.3e-21 Score=181.92 Aligned_cols=136 Identities=16% Similarity=0.139 Sum_probs=62.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCCC-Cc-CCCCCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHHcC
Q 009685 8 AHSPVHLAVARRDYAALRRIIATLPRL-SK-AGEVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLR 79 (528)
Q Consensus 8 G~TPLH~Aa~~G~~e~vk~LL~~ga~v-~~-~~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~~G 79 (528)
+.+|||.||..|+.++++.|+..++.. +. .....++++.++..++.+.+ |++++.+|. .|+||||+|+..|
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 84 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD-AGWSPLHIAASAG 84 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHHT
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCC-CCCCHHHHHHHcC
Confidence 344555555555555555544443321 11 12223333333333333222 444444443 4555555555555
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHh
Q 009685 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAA 144 (528)
Q Consensus 80 ~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~ 144 (528)
+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|.+++..+..|.||+|+|+..
T Consensus 85 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 149 (231)
T 3aji_A 85 XDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAK 149 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence 55555555555555555555555555555555555555555555554444444455555554443
No 20
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.85 E-value=5.9e-21 Score=175.37 Aligned_cols=144 Identities=16% Similarity=0.085 Sum_probs=127.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHH
Q 009685 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVR 77 (528)
Q Consensus 5 D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~ 77 (528)
...+.+|||+||..|+.+++++|+++|++++..+. ..++++.++..++.+.+ |++++..|. .|.||||+|+.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 89 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDH-AGMTPLRLAAL 89 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHH
Confidence 34567999999999999999999999999987544 46667666666655544 889999997 89999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 78 LRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 78 ~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+.
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~ 161 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDL 161 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998765543
No 21
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.85 E-value=2.5e-21 Score=190.43 Aligned_cols=146 Identities=12% Similarity=0.068 Sum_probs=125.6
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|.+|.||||+||..|+.+++++|+++|++++..+. ..++++.++..++.+++ |++++..+ .|.||||
T Consensus 29 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~g~t~L~ 106 (261)
T 2xai_A 29 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLASPIH 106 (261)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--TTCCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC--CCCCHHH
Confidence 467889999999999999999999999999999987544 56777777776666554 77777654 5899999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +..|.||+|+|+..+..+.
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~ 181 (261)
T 2xai_A 107 EAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEEL 181 (261)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHH
T ss_pred HHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999885 7889999999997665543
No 22
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.85 E-value=6.3e-21 Score=186.52 Aligned_cols=137 Identities=20% Similarity=0.047 Sum_probs=98.7
Q ss_pred HHHHHHcCCHHHHHHHHHhCCCCCc--CCCCCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHHcCCHHH
Q 009685 12 VHLAVARRDYAALRRIIATLPRLSK--AGEVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLRDPIS 83 (528)
Q Consensus 12 LH~Aa~~G~~e~vk~LL~~ga~v~~--~~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~~G~~e~ 83 (528)
...++..++.++++.|+..|++++. ...+.++++.++..++.+.+ |++++.+|. .|+||||+|+..|+.++
T Consensus 27 ~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~ 105 (253)
T 1yyh_A 27 GNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDN-MGRTPLHAAVSADAQGV 105 (253)
T ss_dssp -------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHH
T ss_pred cchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHH
Confidence 3457888999999999999999865 34567788777777766554 899999997 89999999999999999
Q ss_pred HHHHHHcCC-CCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 84 AEILMAAGA-DWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 84 VklLL~~GA-dvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+++|+++|+ +++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..+.
T Consensus 106 v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~ 172 (253)
T 1yyh_A 106 FQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDA 172 (253)
T ss_dssp HHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHH
T ss_pred HHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 999999997 899999999999999999999999999999999999999999999999998665543
No 23
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.85 E-value=9.5e-21 Score=180.46 Aligned_cols=140 Identities=14% Similarity=0.140 Sum_probs=91.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCCCCc--CCCCCchhhHHHHHhccccc------c--ccccc-cCCCCCCcHHHHHH
Q 009685 8 AHSPVHLAVARRDYAALRRIIATLPRLSK--AGEVNTEDESLAAELQADAV------S--AVIDR-RDVPGRETPLHLAV 76 (528)
Q Consensus 8 G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~--~~~~~t~l~~~A~~~~~~~v------g--a~In~-kD~p~G~TPLHlAa 76 (528)
|.||||+||..|+.++++.|++.++++.. ...+.++++.++..++.+.+ | .+++. .|. .|.||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~-~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDD-SGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCT-TSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCC-CCCCHHHHHH
Confidence 56777777777777777777777665543 23345555555555444433 4 44444 554 6777777777
Q ss_pred HcCCHHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhh
Q 009685 77 RLRDPISAEILMAAG--ADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 77 ~~G~~e~VklLL~~G--Advn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
..|+.+++++|+++| ++++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..+
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLK 154 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 777777777777776 666777777777777777777777777777777777777777777777777654433
No 24
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.85 E-value=1.8e-21 Score=198.80 Aligned_cols=142 Identities=11% Similarity=0.012 Sum_probs=124.4
Q ss_pred CCC-CCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhc---cccc-------cccccccCCCCC
Q 009685 1 MED-FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQ---ADAV-------SAVIDRRDVPGR 68 (528)
Q Consensus 1 IN~-~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~---~~~v-------ga~In~kD~p~G 68 (528)
+|. .|.+|.||||+||..|+.+++++||++|++++..+. +.++++.++..++ ...+ .++++.+|. .|
T Consensus 123 vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~-~g 201 (327)
T 1sw6_A 123 LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDS-MN 201 (327)
T ss_dssp SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECT-TC
T ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCC-CC
Confidence 466 799999999999999999999999999999998554 5777777766554 2222 478999998 99
Q ss_pred CcHHHHHHH----cCCHHHHHHHHHcCC---------------------------------------------CCCCcCC
Q 009685 69 ETPLHLAVR----LRDPISAEILMAAGA---------------------------------------------DWSLQNE 99 (528)
Q Consensus 69 ~TPLHlAa~----~G~~e~VklLL~~GA---------------------------------------------dvn~~n~ 99 (528)
+||||+|+. .|+.+++++|++.++ +++.+|.
T Consensus 202 ~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~ 281 (327)
T 1sw6_A 202 RTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDS 281 (327)
T ss_dssp CCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCT
T ss_pred CCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCC
Confidence 999999999 899999999998743 5788899
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHH
Q 009685 100 NGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASA 143 (528)
Q Consensus 100 ~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l 143 (528)
.|+||||+|+..|+.+++++|+++|++++..+..|+||+++|+.
T Consensus 282 ~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 282 NGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHh
Confidence 99999999999999999999999999999999999999999864
No 25
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.85 E-value=5.6e-21 Score=187.29 Aligned_cols=147 Identities=22% Similarity=0.220 Sum_probs=129.1
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCC---CCcC-CCCCchhhHHHHHhccccc------cccccccCCCCCCc
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPR---LSKA-GEVNTEDESLAAELQADAV------SAVIDRRDVPGRET 70 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~---v~~~-~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~T 70 (528)
++..|.+|.||||+||..|+.+++++||+.|++ ++.. ..+.++++.++..++.+++ |++++.+|. .|+|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAER-GGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCC
Confidence 578999999999999999999999999999988 5553 3457778777777766555 899999997 8999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCC-----------------------------------------------CCCcCCCCCc
Q 009685 71 PLHLAVRLRDPISAEILMAAGAD-----------------------------------------------WSLQNENGWS 103 (528)
Q Consensus 71 PLHlAa~~G~~e~VklLL~~GAd-----------------------------------------------vn~~n~~G~T 103 (528)
|||+|+..|+.+++++|+++|++ ++.++..|+|
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 99999999999999999998865 6778899999
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCChhHHhh-cCCchHHHHHHhhhhh
Q 009685 104 ALQEAVCTREESIAMIIARHYQPLAWAKW-CRRLPRIVASAARIRD 148 (528)
Q Consensus 104 pLh~A~~~g~~eivklLL~~ga~i~~~~~-~g~tPl~lA~l~~~~D 148 (528)
|||+|+..|+.+++++|+++|++++..+. .|.||+|+|+..+..+
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~ 206 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAAS 206 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHH
Confidence 99999999999999999999999998875 4999999999766544
No 26
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.85 E-value=5.2e-21 Score=190.06 Aligned_cols=141 Identities=14% Similarity=0.115 Sum_probs=93.9
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCC---------
Q 009685 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDV--------- 65 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~--------- 65 (528)
|..|..|.||||+||..|+.+++++||++|++++..+. +.++++.++..++.+++ |++++..|.
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 146 (299)
T 1s70_B 67 NYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIA 146 (299)
T ss_dssp TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHH
Confidence 45566666666666666666666666666666665333 35555555544444333 333333221
Q ss_pred --------------------------------------------------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 009685 66 --------------------------------------------------PGRETPLHLAVRLRDPISAEILMAAGADWS 95 (528)
Q Consensus 66 --------------------------------------------------p~G~TPLHlAa~~G~~e~VklLL~~GAdvn 95 (528)
..|.||||+|+..|+.+++++|+++|++++
T Consensus 147 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~ 226 (299)
T 1s70_B 147 EEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN 226 (299)
T ss_dssp CSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT
T ss_pred HhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence 146677777777777777777777777777
Q ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHH
Q 009685 96 LQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVAS 142 (528)
Q Consensus 96 ~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~ 142 (528)
.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|.
T Consensus 227 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 273 (299)
T 1s70_B 227 IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273 (299)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCC
T ss_pred CcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 77777777777777777777777777777777777777777777774
No 27
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.85 E-value=4e-21 Score=176.29 Aligned_cols=142 Identities=18% Similarity=0.037 Sum_probs=119.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCC-CCcCC-CCCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHHcC
Q 009685 8 AHSPVHLAVARRDYAALRRIIATLPR-LSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLR 79 (528)
Q Consensus 8 G~TPLH~Aa~~G~~e~vk~LL~~ga~-v~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~~G 79 (528)
+.||||+||..|+.++++.|+..++. ++..+ ...++++.++..++.+.+ |++++.+|. .|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAK-ERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcc-cCCCHHHHHHHCC
Confidence 45788888888888888888888766 44433 346666666666555544 788999997 8999999999999
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhHH
Q 009685 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFY 150 (528)
Q Consensus 80 ~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df~ 150 (528)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+..
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~ 151 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQ 151 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999987665544
No 28
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.85 E-value=1.6e-20 Score=180.05 Aligned_cols=144 Identities=19% Similarity=0.217 Sum_probs=90.0
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cc----cccccCCCCCCc
Q 009685 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SA----VIDRRDVPGRET 70 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga----~In~kD~p~G~T 70 (528)
|..|..|.||||+|+..|+.+++++|+++|++++..+. ..++++.++..++.+.+ ++ +++..|. .|.|
T Consensus 40 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-~g~t 118 (241)
T 1k1a_A 40 DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY-DGLT 118 (241)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCT-TSCC
T ss_pred CcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCc-CCCc
Confidence 45566666666666666666666666666666655333 34444444444433332 22 5566665 6667
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhh
Q 009685 71 PLHLAVRLRDPISAEILMAAGADWSLQN-ENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 71 PLHlAa~~G~~e~VklLL~~GAdvn~~n-~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~ 146 (528)
|||+|+..|+.+++++|+++|++++..+ ..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+.
T Consensus 119 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 195 (241)
T 1k1a_A 119 ALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGL 195 (241)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 7777776677777777777776666666 566677777777677777777776666666666666677776665543
No 29
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.85 E-value=1.5e-21 Score=177.31 Aligned_cols=137 Identities=15% Similarity=0.002 Sum_probs=101.5
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCc-HHH
Q 009685 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRET-PLH 73 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~T-PLH 73 (528)
+..+..|.||||+||..|+.+++++|+++|++++..+. ..++++. |..++.+.+ |++++.+|. .|+| |||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~-A~~~~~~~v~~Ll~~g~~~~~~d~-~g~ttpL~ 83 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQV-MMMGSARVAELLLLHGAEPNCADP-ATLTRPVH 83 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTS-SCTTCHHHHHHHHTTTCCCCCCCT-TTCCCHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH-HHcCCHHHHHHHHHcCCCCCCcCC-CCCcHHHH
Confidence 45678899999999999999999999999999887544 4566654 444444433 888999997 8998 999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHH
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIV 140 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~l 140 (528)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.+|..-
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEG 150 (156)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred HHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCccccc
Confidence 9999999999999999999999999999999999999999999999999999999988888888763
No 30
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.85 E-value=1.9e-20 Score=178.06 Aligned_cols=148 Identities=20% Similarity=0.177 Sum_probs=131.6
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCC-CCCcCC-CCCchhhHHHHHhccccc------cccccccCCCCCCcHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLP-RLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPL 72 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga-~v~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPL 72 (528)
++..|..|.||||+|+..|+.+++++|++.++ +++... ...++++.++..++.+.+ |++++.+|. .|.|||
T Consensus 51 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L 129 (223)
T 2f8y_A 51 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD-LGKSAL 129 (223)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TSCBHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCC-CCCcHH
Confidence 46788999999999999999999999999987 666643 346677676666665544 889999997 899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 73 HLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 73 HlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+.
T Consensus 130 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i 206 (223)
T 2f8y_A 130 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDI 206 (223)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998765543
No 31
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=3.7e-21 Score=167.52 Aligned_cols=116 Identities=16% Similarity=0.117 Sum_probs=104.4
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHH
Q 009685 4 FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPIS 83 (528)
Q Consensus 4 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~e~ 83 (528)
.+..|.||||+|+..|+.++++.|++.| ++++.+|. .|+||||+|+..|+.++
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~--------------------------~~~~~~~~-~g~t~L~~A~~~~~~~~ 55 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKG--------------------------EDVNRTLE-GGRKPLHYAADCGQLEI 55 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTSCCT-TSSCHHHHHHHTTCHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcC--------------------------CCcCccCC-CCCcHHHHHHHcCCHHH
Confidence 3567899999999999999999999985 34667776 89999999999999999
Q ss_pred HHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhh
Q 009685 84 AEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 84 VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~ 146 (528)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|.....
T Consensus 56 v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 118 (123)
T 3aaa_C 56 LEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAI 118 (123)
T ss_dssp HHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHH
T ss_pred HHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999854443
No 32
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.84 E-value=6.5e-21 Score=183.00 Aligned_cols=149 Identities=16% Similarity=0.133 Sum_probs=123.5
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------c-ccccccCCCCCCcHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------S-AVIDRRDVPGRETPL 72 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------g-a~In~kD~p~G~TPL 72 (528)
+|..|..|.||||+|+..|+.+++++|+++|++++..+. ..++++.++..++.+.+ + ++++..|. .|.|||
T Consensus 37 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L 115 (237)
T 3b7b_A 37 IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD-GGWTPM 115 (237)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCT-TSCCHH
T ss_pred cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-CCCCHH
Confidence 466788899999999999999999999999988887544 46666666665555444 4 77888886 899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhHH
Q 009685 73 HLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFY 150 (528)
Q Consensus 73 HlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df~ 150 (528)
|+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..+..
T Consensus 116 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 193 (237)
T 3b7b_A 116 IWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCV 193 (237)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHH
Confidence 999999999999999999999999999999999999999999999999999999888888899999999877655543
No 33
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.84 E-value=1.1e-20 Score=173.30 Aligned_cols=136 Identities=20% Similarity=0.191 Sum_probs=116.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|..|.||||+||..|+.+++++|+++|++++..+. ..++++.++..++.+++ |++++.+|. .|+||||
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 107 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDW-NGGTPLL 107 (172)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT-TSCCHHH
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC-CCCCHHH
Confidence 356789999999999999999999999999999988544 46777666666655544 899999997 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCch
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLP 137 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tP 137 (528)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++++++...+..+.+|
T Consensus 108 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 108 YAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred HHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999888777777776
No 34
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.84 E-value=1.4e-20 Score=180.37 Aligned_cols=143 Identities=20% Similarity=0.155 Sum_probs=125.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHh-CCCCCcCCC-CCchhhHHHHHhccccc------cccc-----cccCCCCCCcHHH
Q 009685 7 YAHSPVHLAVARRDYAALRRIIAT-LPRLSKAGE-VNTEDESLAAELQADAV------SAVI-----DRRDVPGRETPLH 73 (528)
Q Consensus 7 ~G~TPLH~Aa~~G~~e~vk~LL~~-ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~I-----n~kD~p~G~TPLH 73 (528)
.|.||||+||..|+.++++.||+. |++++..+. ..++++.++..++.+++ |+++ +..|. .|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELY-EGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTT-TTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCC-CCcCHHH
Confidence 589999999999999999999998 999988544 56777777766665554 5555 66776 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCC-------------CCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHH
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNE-------------NGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIV 140 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~-------------~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~l 140 (528)
+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++..+..|.||+|+
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 160 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHI 160 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 99999999999999999999998876 79999999999999999999999999999999999999999
Q ss_pred HHHhhhhhHH
Q 009685 141 ASAARIRDFY 150 (528)
Q Consensus 141 A~l~~~~Df~ 150 (528)
|+..+..+..
T Consensus 161 A~~~~~~~~~ 170 (232)
T 2rfa_A 161 LILQPNKTFA 170 (232)
T ss_dssp HHTCSCHHHH
T ss_pred HHHcCChHHH
Confidence 9987665543
No 35
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.84 E-value=6.9e-21 Score=172.44 Aligned_cols=142 Identities=14% Similarity=0.061 Sum_probs=123.0
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCC-CchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHHc
Q 009685 6 KYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEV-NTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRL 78 (528)
Q Consensus 6 ~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~-~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~~ 78 (528)
....||||+|+..|+.+++++|+++|++++..+.. .++++. |..++.+.+ |++++.+|. .|.||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~-A~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 80 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQV-MKLGNPEIARRLLLRGANPDLKDR-TGFAVIHDAARA 80 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHH-CCSSCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHH-HHcCcHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHc
Confidence 34679999999999999999999999999886554 555544 444544443 889999997 899999999999
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCC-hhHHhhcCCchHHHHHHhhhhhH
Q 009685 79 RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP-LAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 79 G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~-i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++..+..|.||+++|+..+..+.
T Consensus 81 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~ 152 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEV 152 (162)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHH
Confidence 999999999999999999999999999999999999999999999998 58888999999999998765543
No 36
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.84 E-value=7.2e-21 Score=182.52 Aligned_cols=150 Identities=21% Similarity=0.216 Sum_probs=131.0
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCC----CCCcCC-CCCchhhHHHHHhccccc------cccccccCCCCCC
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLP----RLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRE 69 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga----~v~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~ 69 (528)
++..|..|.||||+|+..|+.+++++|++.++ +++..+ ...++++.++..++.+.+ |++++..+...|.
T Consensus 72 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 151 (241)
T 1k1a_A 72 PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGR 151 (241)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCC
Confidence 35678999999999999999999999999987 666543 356677666666655544 8889988822799
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 70 TPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 70 TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+.
T Consensus 152 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i 231 (241)
T 1k1a_A 152 SPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 231 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987766554
Q ss_pred H
Q 009685 150 Y 150 (528)
Q Consensus 150 ~ 150 (528)
.
T Consensus 232 ~ 232 (241)
T 1k1a_A 232 L 232 (241)
T ss_dssp H
T ss_pred H
Confidence 3
No 37
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.84 E-value=2.5e-20 Score=183.36 Aligned_cols=141 Identities=16% Similarity=0.054 Sum_probs=123.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCCcCC-CCCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHHcC
Q 009685 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLR 79 (528)
Q Consensus 7 ~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~~G 79 (528)
.|+||||+||..|+.+++++|++.|++++..+ .+.++++.++..++.+++ |++++.+|. .|+||||+|+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA-DWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcC
Confidence 68999999999999999999999999998855 457777777777666554 899999997 8999999999999
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 80 ~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+.+++++|+++|++++.. ..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..+.
T Consensus 81 ~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 149 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRAC 149 (261)
T ss_dssp CHHHHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHH
Confidence 999999999999999864 569999999999999999999999999999999999999999998665443
No 38
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.84 E-value=1.2e-20 Score=174.80 Aligned_cols=141 Identities=18% Similarity=0.116 Sum_probs=118.4
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHh-CCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHH
Q 009685 6 KYAHSPVHLAVARRDYAALRRIIAT-LPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVR 77 (528)
Q Consensus 6 ~~G~TPLH~Aa~~G~~e~vk~LL~~-ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~ 77 (528)
.++.+|||.||..|+.++++.||+. +.+++..+. ..++++.++..++.+.+ |++++.+|. .|.||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNR-GDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHH
Confidence 4577889999999999999999887 445665443 45666666666555544 788999997 89999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhh
Q 009685 78 LRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIR 147 (528)
Q Consensus 78 ~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~ 147 (528)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~ 151 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRE 151 (179)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999765443
No 39
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.84 E-value=3.2e-20 Score=178.10 Aligned_cols=148 Identities=18% Similarity=0.190 Sum_probs=132.2
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
++..|..|.||||+||..|+.+++++|+++|++++..+. ..++++.++..++.+.+ |++++.+|. .|.||||
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 82 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDA-EGSTCLH 82 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCT-TSCCHHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCC-CCCcHHH
Confidence 467899999999999999999999999999999988544 46666666666655544 888999997 8999999
Q ss_pred HHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 74 LAVRLRDPISAEILMAAG-ADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~G-Advn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+|+..|+.+++++|+++| ++++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..+.
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 159 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDI 159 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHH
Confidence 999999999999999999 8999999999999999999999999999999999999999999999999998765443
No 40
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.84 E-value=1.2e-20 Score=167.41 Aligned_cols=118 Identities=19% Similarity=0.139 Sum_probs=107.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHHH
Q 009685 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISA 84 (528)
Q Consensus 5 D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~e~V 84 (528)
...|.||||+||..|+.+++++|+++| ++++.+|. .|+||||+||..|+.+++
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~~~~~~~~v 63 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANG--------------------------ADVNAKDE-YGLTPLYLATAHGHLEIV 63 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcC--------------------------CCCCCcCC-CCCCHHHHHHHcCCHHHH
Confidence 456789999999999999999999986 45667776 899999999999999999
Q ss_pred HHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 85 EILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 85 klLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+.
T Consensus 64 ~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~ 128 (136)
T 2jab_A 64 EVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDL 128 (136)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999998765543
No 41
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.84 E-value=1.4e-20 Score=188.05 Aligned_cols=146 Identities=12% Similarity=0.063 Sum_probs=122.4
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|.+|.||||+||..|+.+++++|+++|++++..+. ..++++.++..++.+++ |++++..+ .|.||||
T Consensus 85 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~g~t~L~ 162 (285)
T 3d9h_A 85 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLASPIH 162 (285)
T ss_dssp SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--TTSCHHH
T ss_pred CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC--CCCCHHH
Confidence 466788999999999999999999999999999887544 46677666666665544 67777655 4899999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +..|.||+|+|+..+..+.
T Consensus 163 ~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~ 237 (285)
T 3d9h_A 163 EAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEEL 237 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999999999999999999998884 7788999999987665544
No 42
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.83 E-value=1.7e-20 Score=168.99 Aligned_cols=139 Identities=19% Similarity=0.147 Sum_probs=120.8
Q ss_pred CChHHHHHHHcCCHHHHHHHHHh-CCCCCcCC-CCCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHHcC
Q 009685 8 AHSPVHLAVARRDYAALRRIIAT-LPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLR 79 (528)
Q Consensus 8 G~TPLH~Aa~~G~~e~vk~LL~~-ga~v~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~~G 79 (528)
|.||||+||..|+.++++.|++. +.+++..+ ...++++. +..++.+.+ |++++.+|. .|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDT-SGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcC
Confidence 56899999999999999999988 23666544 34666666 666655544 889999997 8999999999999
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 80 ~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++..+..|.||+++|+..+..+.
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~ 148 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDL 148 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHH
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 99999999999999999999999999999999999999999999 9999999999999999998765554
No 43
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.83 E-value=3.8e-21 Score=187.16 Aligned_cols=136 Identities=13% Similarity=-0.003 Sum_probs=92.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHHc
Q 009685 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRL 78 (528)
Q Consensus 5 D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~~ 78 (528)
+..|.||||.|+..|+.++++.||++|++++......++++.++..++.+.+ |++++.+|. .|+||||+||..
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~ 80 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPND-EGITALHNAVCA 80 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCT-TSCCHHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHc
Confidence 5679999999999999999999999999998765556677777777766554 789999997 999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCC-chHHHH
Q 009685 79 RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRR-LPRIVA 141 (528)
Q Consensus 79 G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~-tPl~lA 141 (528)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..+. ||+++|
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHC
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHH
Confidence 999999999999999999999999999999999999999999999999999888877 999988
No 44
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.83 E-value=1.7e-20 Score=192.66 Aligned_cols=147 Identities=15% Similarity=0.056 Sum_probs=109.0
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccc----------cccccc--------
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV----------SAVIDR-------- 62 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~v----------ga~In~-------- 62 (528)
+|..|.+|.||||+||..|+.+++++||++|++++.. ...++++.++..++.+++ +++++.
T Consensus 46 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 124 (364)
T 3ljn_A 46 PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLW-HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDER 124 (364)
T ss_dssp TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCB-TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcccc-CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchH
Confidence 4667788888888888888888888888888766542 335555555555544433 333333
Q ss_pred ---------cCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCC-----
Q 009685 63 ---------RDVPGRETPLHLAVRLR--DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP----- 126 (528)
Q Consensus 63 ---------kD~p~G~TPLHlAa~~G--~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~----- 126 (528)
.|. .|.||||+|+..| +.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 125 ~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 203 (364)
T 3ljn_A 125 EVNEIGSHVKHC-KGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLR 203 (364)
T ss_dssp CEEEETTEEEEE-SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCC
T ss_pred hhhhhccccCCC-CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccc
Confidence 665 7888888888888 88888888888888888888888888888888888888888888877
Q ss_pred hhHHhhcCCchHHHHHHhhhhhH
Q 009685 127 LAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 127 i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
++..+..|.||+|+|+..+..+.
T Consensus 204 ~~~~~~~g~t~L~~A~~~g~~~~ 226 (364)
T 3ljn_A 204 LDYANKQGNSHLHWAILINWEDV 226 (364)
T ss_dssp TTCCCTTCCCTTHHHHTTTCHHH
T ss_pred ccccCCCCCcHHHHHHHcCCHHH
Confidence 77777888888888887655443
No 45
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.83 E-value=2.2e-20 Score=170.14 Aligned_cols=139 Identities=18% Similarity=0.135 Sum_probs=117.8
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhC-CCCCcC-CCCCchhhHHHHHhccccc------cccccccCCCCCCcHHHHH
Q 009685 4 FAKYAHSPVHLAVARRDYAALRRIIATL-PRLSKA-GEVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLA 75 (528)
Q Consensus 4 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~g-a~v~~~-~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlA 75 (528)
.|.+|.||||.|+..|+.++++.|++.+ .+++.. ....++++.++..++.+.+ |++++.+|. .|+||||+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A 82 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDK-GGLVPLHNA 82 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCC-CCCCHHHHH
Confidence 4677889999999999999999999854 333332 2345677666666655544 788999997 899999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHH
Q 009685 76 VRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASA 143 (528)
Q Consensus 76 a~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l 143 (528)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|..
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT
T ss_pred HHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999764
No 46
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.83 E-value=4.1e-20 Score=194.12 Aligned_cols=144 Identities=16% Similarity=0.134 Sum_probs=106.7
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHHH
Q 009685 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHL 74 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHl 74 (528)
|..+..|.||||+|+..|+.+++++|+++|++++..+. ..++++.++..++.+++ |++++.+|. .|+||||+
T Consensus 239 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~ 317 (437)
T 1n11_A 239 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR-MGYTPLHV 317 (437)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCS-SCCCHHHH
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCC-CCCCHHHH
Confidence 45666777777777777777777777777777766433 35555555555554433 677777776 78888888
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhh
Q 009685 75 AVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 75 Aa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~ 146 (528)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+.
T Consensus 318 A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~ 389 (437)
T 1n11_A 318 ASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGY 389 (437)
T ss_dssp HHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTC
T ss_pred HHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCc
Confidence 888888888888888888888888888888888888888888888888888888777788888888776553
No 47
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.83 E-value=9.5e-20 Score=183.56 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=73.4
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|..|.||||+||..|+.+++++|+++|++++..+. ..++++.++..++.+++ |++++..|. .|.||||
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~-~g~t~L~ 129 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDL-WQFTPLH 129 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHH
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCC-CCCCHHH
Confidence 356778888888888888888888888888888877543 46666666666655544 778888886 7888888
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCc
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQ 97 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~ 97 (528)
+|+..|+.+++++|+++|++++..
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~~ 153 (351)
T 3utm_A 130 EAASKNRVEVCSLLLSHGADPTLV 153 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCccc
Confidence 888888888888888777776543
No 48
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.82 E-value=7.6e-20 Score=182.80 Aligned_cols=146 Identities=16% Similarity=0.041 Sum_probs=129.7
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCC-CCCchhhHHHHHhccccc------cccccccCCCCCCcHHHH
Q 009685 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHL 74 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHl 74 (528)
+..|..|+||||+||..|+.+++++||+.|++++..+ .+.++++.++..++.+++ |++++.+|. .|.||||+
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~ 131 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA-DWHTPLFN 131 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCT-TCCCHHHH
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCC-CCCCHHHH
Confidence 5678899999999999999999999999999998754 456777777766665554 899999997 89999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 75 AVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 75 Aa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
|+..|+.+++++|+++|++++..+ .|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+.
T Consensus 132 A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~ 205 (285)
T 3d9h_A 132 ACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRAC 205 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHH
T ss_pred HHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 999999999999999999998655 49999999999999999999999999999999999999999998765543
No 49
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.82 E-value=1.5e-20 Score=188.16 Aligned_cols=146 Identities=12% Similarity=-0.043 Sum_probs=127.8
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccc------cccccccCCCCCCcHHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHL 74 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHl 74 (528)
+|..|.+|.||||+||..|+.+++++|+++|++++... +.++++.++..++.+++ |++++.+|. .|+||||+
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~t~L~~ 101 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE-NEFPLHQAATLEDTKIVKILLFSGLDDSQFDD-KGNTALYY 101 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT-TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCT-TSCCHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCcHHHH
Confidence 47889999999999999999999999999999998763 57777777766666554 899999997 89999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCC-CcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 75 AVRLRDPISAEILMAAGADWSLQNENG-WSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 75 Aa~~G~~e~VklLL~~GAdvn~~n~~G-~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
|+..|+.+++++|+++|++++.++..| .||||+|+..|+.+++++|+++|++.... ..|.||+|+|+..+..+.
T Consensus 102 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~ 176 (285)
T 3kea_A 102 AVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDM 176 (285)
T ss_dssp HHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHH
Confidence 999999999999999999999999999 69999999999999999999999876322 278899999998765443
No 50
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=5.3e-20 Score=152.77 Aligned_cols=93 Identities=24% Similarity=0.345 Sum_probs=86.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHHHHH
Q 009685 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISAEI 86 (528)
Q Consensus 7 ~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~e~Vkl 86 (528)
+|+||||+||..|+.+++++|++.| ++++.+|. .|+||||+|+..|+.+++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g--------------------------~~~n~~d~-~g~t~L~~A~~~~~~~~v~~ 53 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG--------------------------ADVNAKDK-NGRTPLHLAARNGHLEVVKL 53 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCT-TSCCHHHHHHHTTCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC--------------------------CCCcccCC-CCCCHHHHHHHcCCHHHHHH
Confidence 5899999999999999999999985 45677786 89999999999999999999
Q ss_pred HHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCC
Q 009685 87 LMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (528)
Q Consensus 87 LL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~ 126 (528)
|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 54 Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 54 LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999874
No 51
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.82 E-value=9e-21 Score=185.11 Aligned_cols=144 Identities=15% Similarity=0.081 Sum_probs=121.9
Q ss_pred CCCCChHHHHHH---HcCCHHHHHHHHHhCCCCCc-----------C-CCCCchhhHHHHHhccccc------ccccccc
Q 009685 5 AKYAHSPVHLAV---ARRDYAALRRIIATLPRLSK-----------A-GEVNTEDESLAAELQADAV------SAVIDRR 63 (528)
Q Consensus 5 D~~G~TPLH~Aa---~~G~~e~vk~LL~~ga~v~~-----------~-~~~~t~l~~~A~~~~~~~v------ga~In~k 63 (528)
|.+|.||||+|+ ..|+.+++++||+.|++.+. . ....++++.++..++.+++ |++++.+
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 477999999999 66999999999998755321 1 1456777777777766554 8889888
Q ss_pred C--------------CCCCCcHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCCcHHHHHHHcCC---------HHHH
Q 009685 64 D--------------VPGRETPLHLAVRLRDPISAEILMA---AGADWSLQNENGWSALQEAVCTRE---------ESIA 117 (528)
Q Consensus 64 D--------------~p~G~TPLHlAa~~G~~e~VklLL~---~GAdvn~~n~~G~TpLh~A~~~g~---------~eiv 117 (528)
| . .|.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..++ .+++
T Consensus 123 ~~~~~~~~~~~~~~~~-~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v 201 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFY-FGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMY 201 (260)
T ss_dssp CEECCCSSSCCCCSCC-SCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHH
T ss_pred ccccccCccccccccc-CCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHH
Confidence 8 4 79999999999999999999999 999999999999999999998887 6899
Q ss_pred HHHHHhcCCh-------hHHhhcCCchHHHHHHhhhhhH
Q 009685 118 MIIARHYQPL-------AWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 118 klLL~~ga~i-------~~~~~~g~tPl~lA~l~~~~Df 149 (528)
++|+++|+++ +..+..|.||+|+|+..+..+.
T Consensus 202 ~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 240 (260)
T 3jxi_A 202 DLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240 (260)
T ss_dssp HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence 9999999988 6788999999999998765544
No 52
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.82 E-value=1.1e-19 Score=156.62 Aligned_cols=115 Identities=21% Similarity=0.280 Sum_probs=103.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHHHHH
Q 009685 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISAEI 86 (528)
Q Consensus 7 ~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~e~Vkl 86 (528)
+|.||||+|+..|+.+++++|+++|+ +++..|. .|.||||+|+..|+.+++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~--------------------------~~~~~~~-~g~t~L~~A~~~~~~~~~~~ 53 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA--------------------------DVNAKDK-NGRTPLHLAARNGHLEVVKL 53 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC--------------------------CTTCCCT-TSCCHHHHHHHHTCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC--------------------------CCCCcCC-CCCcHHHHHHHcCcHHHHHH
Confidence 58999999999999999999999864 4556665 79999999999999999999
Q ss_pred HHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhh
Q 009685 87 LMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 87 LL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+
T Consensus 54 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 115 (126)
T 1n0r_A 54 LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE 115 (126)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHH
Confidence 99999999999999999999999999999999999999999988899999999998766443
No 53
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.82 E-value=5.9e-20 Score=179.14 Aligned_cols=136 Identities=15% Similarity=0.083 Sum_probs=118.2
Q ss_pred CCChHHHHHHHcCCHH----HHHHHHHhCCCCCc-----CCCCCchhhHHHHH---hccccc------cccccc------
Q 009685 7 YAHSPVHLAVARRDYA----ALRRIIATLPRLSK-----AGEVNTEDESLAAE---LQADAV------SAVIDR------ 62 (528)
Q Consensus 7 ~G~TPLH~Aa~~G~~e----~vk~LL~~ga~v~~-----~~~~~t~l~~~A~~---~~~~~v------ga~In~------ 62 (528)
+|+||||+||..|+.+ ++++|++.|++++. ...+.++++.++.. ++.+++ |++++.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 5899999999999997 66778889999986 44557777777766 655554 555442
Q ss_pred -----cCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-------------CCcHHHHHHHcCCHHHHHHHHH--
Q 009685 63 -----RDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNEN-------------GWSALQEAVCTREESIAMIIAR-- 122 (528)
Q Consensus 63 -----kD~p~G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~-------------G~TpLh~A~~~g~~eivklLL~-- 122 (528)
+|. .|.||||+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 159 (256)
T 2etb_A 81 AQCTDEFY-QGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP 159 (256)
T ss_dssp CCCCSTTT-TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccc-cCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 345 7999999999999999999999999999999886 9999999999999999999999
Q ss_pred -hcCChhHHhhcCCchHHHHHH
Q 009685 123 -HYQPLAWAKWCRRLPRIVASA 143 (528)
Q Consensus 123 -~ga~i~~~~~~g~tPl~lA~l 143 (528)
+|++++..+..|+||+|+|+.
T Consensus 160 ~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 160 HQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHH
T ss_pred ccCCCcCccCCCCCCHHHHHHH
Confidence 999999999999999999997
No 54
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.82 E-value=8.3e-20 Score=183.97 Aligned_cols=84 Identities=17% Similarity=0.120 Sum_probs=42.3
Q ss_pred cccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCc
Q 009685 57 SAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRL 136 (528)
Q Consensus 57 ga~In~kD~p~G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~t 136 (528)
|++++.+|. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.|
T Consensus 237 g~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t 315 (351)
T 3utm_A 237 GANVNEKNK-DFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFT 315 (351)
T ss_dssp TCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCcCCcCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCC
Confidence 344444443 4555555555555555555555555555555555555555555555555555555555555544455555
Q ss_pred hHHHH
Q 009685 137 PRIVA 141 (528)
Q Consensus 137 Pl~lA 141 (528)
|+++|
T Consensus 316 al~~a 320 (351)
T 3utm_A 316 AAQMG 320 (351)
T ss_dssp HHHHS
T ss_pred hhhhh
Confidence 55544
No 55
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.81 E-value=3e-19 Score=174.29 Aligned_cols=144 Identities=20% Similarity=0.140 Sum_probs=79.1
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------ccccccc----------C
Q 009685 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRR----------D 64 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~k----------D 64 (528)
+..|..|.||||+|+..|+.+++++|+++|++++..+. ..++++.++..++.+.+ |++++.. +
T Consensus 66 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~ 145 (285)
T 1wdy_A 66 VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLR 145 (285)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTT
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhc
Confidence 34555666666666666666666666666666655332 34444444443333322 4444443 3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCC----HHHHHHHHHhcCChhHHhhcCCchHH
Q 009685 65 VPGRETPLHLAVRLRDPISAEILMAA-GADWSLQNENGWSALQEAVCTRE----ESIAMIIARHYQPLAWAKWCRRLPRI 139 (528)
Q Consensus 65 ~p~G~TPLHlAa~~G~~e~VklLL~~-GAdvn~~n~~G~TpLh~A~~~g~----~eivklLL~~ga~i~~~~~~g~tPl~ 139 (528)
. .|.||||+|+..|+.+++++|+++ |++++..+..|+||||+|+..++ .+++++|+++|++++..+..|.||+|
T Consensus 146 ~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~ 224 (285)
T 1wdy_A 146 K-GGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI 224 (285)
T ss_dssp C-CCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHH
T ss_pred c-CCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 3 455666666666666666655554 55555555555556555555555 55555555555555555555555555
Q ss_pred HHHHhhh
Q 009685 140 VASAARI 146 (528)
Q Consensus 140 lA~l~~~ 146 (528)
+|+..+.
T Consensus 225 ~A~~~~~ 231 (285)
T 1wdy_A 225 LAVEKKH 231 (285)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 5555443
No 56
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.81 E-value=5.3e-20 Score=181.41 Aligned_cols=146 Identities=14% Similarity=0.023 Sum_probs=122.4
Q ss_pred CCCCCChHHHHHHHc---CCHHHHHHHHHhCCCCC-------c-----CCCCCchhhHHHHHhccccc------cccccc
Q 009685 4 FAKYAHSPVHLAVAR---RDYAALRRIIATLPRLS-------K-----AGEVNTEDESLAAELQADAV------SAVIDR 62 (528)
Q Consensus 4 ~D~~G~TPLH~Aa~~---G~~e~vk~LL~~ga~v~-------~-----~~~~~t~l~~~A~~~~~~~v------ga~In~ 62 (528)
.|..|.||||+||.. |+.+++++||++|++.+ . .....++++.++..++.+++ |++++.
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 478999999999987 99999999999986532 1 23467777777777766554 888888
Q ss_pred cCC-------------CCCCcHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCCcHHHHHHHcCC---------HHHH
Q 009685 63 RDV-------------PGRETPLHLAVRLRDPISAEILMA---AGADWSLQNENGWSALQEAVCTRE---------ESIA 117 (528)
Q Consensus 63 kD~-------------p~G~TPLHlAa~~G~~e~VklLL~---~GAdvn~~n~~G~TpLh~A~~~g~---------~eiv 117 (528)
++. ..|.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+ .+++
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v 209 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMY 209 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHH
Confidence 873 149999999999999999999999 999999999999999999999888 7899
Q ss_pred HHHHHhcCChh-------HHhhcCCchHHHHHHhhhhhH
Q 009685 118 MIIARHYQPLA-------WAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 118 klLL~~ga~i~-------~~~~~g~tPl~lA~l~~~~Df 149 (528)
++|+++|++++ ..+..|.||+++|+..+..+.
T Consensus 210 ~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~i 248 (273)
T 2pnn_A 210 NEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGV 248 (273)
T ss_dssp HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHH
Confidence 99999998886 478899999999998765543
No 57
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.81 E-value=1.6e-19 Score=189.63 Aligned_cols=147 Identities=16% Similarity=0.133 Sum_probs=123.7
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCC-CCCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..+..|.||||+||..|+.+++++|+++|++++..+ ...++++.++..++.+++ |++++.+|. .|+||||
T Consensus 7 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 85 (437)
T 1n11_A 7 GGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAK-DDQTPLH 85 (437)
T ss_dssp --------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCT-TSCCHHH
T ss_pred ccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCCHHH
Confidence 46778899999999999999999999999999988754 456777777777766655 889999997 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhh
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|++++.+.+..+..|.||+++|+..+..+
T Consensus 86 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~ 160 (437)
T 1n11_A 86 CAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVR 160 (437)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999988888888999999999766544
No 58
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.81 E-value=6.2e-20 Score=188.42 Aligned_cols=145 Identities=17% Similarity=0.059 Sum_probs=125.5
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHHH
Q 009685 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHL 74 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHl 74 (528)
+..|.+|.||||+||..|+.+++++||++|++++..+. ..++++.++..++.+++ |++++. . .|.||||+
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~-~g~t~L~~ 90 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--W-HGQKPIHL 90 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--B-TTBCHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--c-CCCCHHHH
Confidence 56788999999999999999999999999999998554 57777777777666655 554443 3 68999999
Q ss_pred HHHcCCHHHHHHHHHc----CCCCCC-----------------cCCCCCcHHHHHHHcC--CHHHHHHHHHhcCChhHHh
Q 009685 75 AVRLRDPISAEILMAA----GADWSL-----------------QNENGWSALQEAVCTR--EESIAMIIARHYQPLAWAK 131 (528)
Q Consensus 75 Aa~~G~~e~VklLL~~----GAdvn~-----------------~n~~G~TpLh~A~~~g--~~eivklLL~~ga~i~~~~ 131 (528)
|+..|+.+++++|+++ |++++. .+..|+||||+|+..| +.+++++|+++|++++..+
T Consensus 91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d 170 (364)
T 3ljn_A 91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKD 170 (364)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCC
T ss_pred HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccC
Confidence 9999999999999999 888887 8899999999999999 9999999999999999999
Q ss_pred hcCCchHHHHHHhhhhhH
Q 009685 132 WCRRLPRIVASAARIRDF 149 (528)
Q Consensus 132 ~~g~tPl~lA~l~~~~Df 149 (528)
..|.||+|+|+..+..+.
T Consensus 171 ~~g~t~L~~A~~~g~~~~ 188 (364)
T 3ljn_A 171 KADETPLMRAMEFRNREA 188 (364)
T ss_dssp TTSCCHHHHHHHTTCHHH
T ss_pred CCCCCHHHHHHHcCCHHH
Confidence 999999999998765544
No 59
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.81 E-value=1.9e-19 Score=164.29 Aligned_cols=126 Identities=19% Similarity=0.253 Sum_probs=112.8
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|..|.||||+|+..|+.+++++|+++|++++..+. ..++++.++..++.+.+ |++++.+|. .|.||||
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 107 (167)
T 3v31_A 29 INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDW-NGGTPLL 107 (167)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TSCCHHH
T ss_pred cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCC-CCCCHHH
Confidence 467899999999999999999999999999999987544 46777666666665544 899999997 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCCh
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPL 127 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i 127 (528)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++.++
T Consensus 108 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 108 YAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999987543
No 60
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.81 E-value=1.7e-20 Score=179.55 Aligned_cols=119 Identities=19% Similarity=0.160 Sum_probs=109.5
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHH
Q 009685 4 FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPIS 83 (528)
Q Consensus 4 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~e~ 83 (528)
.+..|.||||+||..|+.++++.||+.| ++++.+|. .|+||||+||..|+.++
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~~~~~~~~ 121 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNR--------------------------VGVNGLDK-AGSTALYWACHGGHKDI 121 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCT-TSCCHHHHHHHTTCHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCC--------------------------CCccccCC-CCCCHHHHHHHcCCHHH
Confidence 4567899999999999999999999985 45677776 89999999999999999
Q ss_pred HHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 84 AEILMAA-GADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 84 VklLL~~-GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+++|+++ |++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..++
T Consensus 122 v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 188 (222)
T 3ehr_A 122 VEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASL 188 (222)
T ss_dssp HHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHH
T ss_pred HHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHH
Confidence 9999999 99999999999999999999999999999999999999999999999999987665443
No 61
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.81 E-value=1.5e-19 Score=163.64 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=110.0
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|..|.||||+|+. |+.+++++|+++|++++..+. ..++++.++..++.+.+ |++++.+|. .|+||||
T Consensus 31 ~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 108 (162)
T 1ihb_A 31 VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDN-EGNLPLH 108 (162)
T ss_dssp TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHH
T ss_pred ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHH
Confidence 46788999999999999 999999999999999988554 56777777766665544 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCC
Q 009685 74 LAVRLRDPISAEILMAAGAD-WSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAd-vn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~ 126 (528)
+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 109 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 109 LAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999999999999999998 699999999999999999999999999999874
No 62
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.81 E-value=2.7e-19 Score=164.22 Aligned_cols=123 Identities=21% Similarity=0.234 Sum_probs=110.2
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|..|.||||+||..|+.+++++|+++|++++..+. ..++++.++..++.+++ |++++.+|. .|.||||
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~ 118 (169)
T 2y1l_E 40 VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDM-EGHTPLH 118 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHH
Confidence 467889999999999999999999999999999987554 56777776666665544 899999997 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHY 124 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~g 124 (528)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 119 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 119 LAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999998765
No 63
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.81 E-value=3.2e-20 Score=178.82 Aligned_cols=146 Identities=19% Similarity=0.127 Sum_probs=121.4
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhCC----CCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCc
Q 009685 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLP----RLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRET 70 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga----~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~T 70 (528)
+.+|.+|.||||+||..|+.++++.|++.+. +++..+. ..++++.++..++.+++ |++++.+|. .|.|
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t 80 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDF-RGNT 80 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCT-TCCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCC
Confidence 4678999999999999999999999998765 5666444 56777777766665544 889999997 9999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhh-cCCchHHHHHH
Q 009685 71 PLHLAVRLRDPISAEILMAAGAD------WSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKW-CRRLPRIVASA 143 (528)
Q Consensus 71 PLHlAa~~G~~e~VklLL~~GAd------vn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~-~g~tPl~lA~l 143 (528)
|||+|+..|+.+++++|+++|++ ++..+..|+||||+|+..|+.+++++|+++|++++..+. .|.||+|+|+.
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~ 160 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVD 160 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999987 567788999999999999999999999999999999887 99999999998
Q ss_pred hhhhh
Q 009685 144 ARIRD 148 (528)
Q Consensus 144 ~~~~D 148 (528)
.+..+
T Consensus 161 ~~~~~ 165 (236)
T 1ikn_D 161 LQNPD 165 (236)
T ss_dssp TTCHH
T ss_pred cCCHH
Confidence 76544
No 64
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=5.2e-20 Score=158.12 Aligned_cols=109 Identities=19% Similarity=0.256 Sum_probs=99.9
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHH
Q 009685 3 DFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPI 82 (528)
Q Consensus 3 ~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~e 82 (528)
..|.+|.||||+||..|+.+++++|+++| ++++.+|. .|.||||+|+..|+.+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g--------------------------~~~~~~d~-~g~t~L~~A~~~~~~~ 56 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKG--------------------------ADVNARSK-DGNTPLHLAAKNGHAE 56 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTT--------------------------CCSSCCCS-SSCCTTHHHHTTTCHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCCcCC-CCCCHHHHHHHcCcHH
Confidence 47899999999999999999999999985 45667776 8999999999999999
Q ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchH
Q 009685 83 SAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPR 138 (528)
Q Consensus 83 ~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl 138 (528)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..+.+|-
T Consensus 57 ~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 57 IVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999999999999999999999999998888774
No 65
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.80 E-value=2e-19 Score=186.68 Aligned_cols=148 Identities=16% Similarity=0.121 Sum_probs=127.1
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------c---ccccccCCCCCCc
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------S---AVIDRRDVPGRET 70 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------g---a~In~kD~p~G~T 70 (528)
+|..|.+|.||||+||..|+.+++++||++|++++..+. ..++++.++..++.+++ + ++++..|. .|.|
T Consensus 159 vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~-~g~t 237 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR-NGMT 237 (373)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCT-TSCC
T ss_pred CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCC-CCCC
Confidence 477899999999999999999999999999999988544 46677666666655544 3 68888897 8999
Q ss_pred HHHHHHHcC---CHHHHHHHHHcCCCCCC--------cCCCCCcHHHHHHHcCCHHHHHHHHHhc-CChhHHhhcCCchH
Q 009685 71 PLHLAVRLR---DPISAEILMAAGADWSL--------QNENGWSALQEAVCTREESIAMIIARHY-QPLAWAKWCRRLPR 138 (528)
Q Consensus 71 PLHlAa~~G---~~e~VklLL~~GAdvn~--------~n~~G~TpLh~A~~~g~~eivklLL~~g-a~i~~~~~~g~tPl 138 (528)
|||+|+..+ +.+++++|+++|++++. .|..|+||||+|+..|+.+++++|++++ ++++..+..|.||+
T Consensus 238 ~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL 317 (373)
T 2fo1_E 238 ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPI 317 (373)
T ss_dssp HHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHH
T ss_pred HHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHH
Confidence 999999998 89999999999999886 5678999999999999999999999876 99999999999999
Q ss_pred HHHHHhhhhhH
Q 009685 139 IVASAARIRDF 149 (528)
Q Consensus 139 ~lA~l~~~~Df 149 (528)
|+|+..+..+.
T Consensus 318 ~~A~~~g~~~i 328 (373)
T 2fo1_E 318 MLAAQEGRIEV 328 (373)
T ss_dssp HHHHHHTCHHH
T ss_pred HHHHHcCCHHH
Confidence 99998765443
No 66
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.80 E-value=1.9e-19 Score=178.76 Aligned_cols=143 Identities=18% Similarity=0.096 Sum_probs=119.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHH
Q 009685 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVR 77 (528)
Q Consensus 5 D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~ 77 (528)
+..|.||||+||..|+.+++++||++|++++..+. +.++++.++..++.+++ |++++.+|. .|+||||+|+.
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~tpL~~A~~ 115 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDN-EGWIPLHAAAS 115 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHH
Confidence 45678999999999999999999999999988544 46777777766666554 899999997 89999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCcCC----------------------------------------------------------
Q 009685 78 LRDPISAEILMAAGADWSLQNE---------------------------------------------------------- 99 (528)
Q Consensus 78 ~G~~e~VklLL~~GAdvn~~n~---------------------------------------------------------- 99 (528)
.|+.+++++|+++|++++..+.
T Consensus 116 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRH 195 (299)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred cCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhh
Confidence 9999999999999999987664
Q ss_pred --CCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhh
Q 009685 100 --NGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 100 --~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
.|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..+
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~ 246 (299)
T 1s70_B 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEE 246 (299)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred cCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHH
Confidence 4667777788888888888888888888888888888888888765443
No 67
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.80 E-value=4e-19 Score=166.03 Aligned_cols=123 Identities=17% Similarity=0.131 Sum_probs=111.1
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
++..|..|.||||+|+..|+.+++++|+++|++++..+. ..++++.++..++.+++ |++++.+|. .|.||||
T Consensus 61 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 139 (192)
T 2rfm_A 61 LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNL-EGETPLI 139 (192)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TCCCHHH
T ss_pred cccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHH
Confidence 467789999999999999999999999999999988554 57777777766665544 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHY 124 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~g 124 (528)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 140 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 140 VASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999875
No 68
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.80 E-value=7.6e-20 Score=170.55 Aligned_cols=112 Identities=18% Similarity=0.139 Sum_probs=104.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHHH
Q 009685 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISA 84 (528)
Q Consensus 5 D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~e~V 84 (528)
+..|.||||+||..|+.++++.||+ |+ +++.+|. .|+||||+|+..|+.+++
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--------------------------~~~~~d~-~g~t~L~~A~~~~~~~~v 92 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DR--------------------------DVDAVDE-NGRTALLFVAGLGSDKCV 92 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TS--------------------------CTTCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cC--------------------------CCCCcCC-CCCCHHHHHHHcCCHHHH
Confidence 4578999999999999999999998 53 4667776 899999999999999999
Q ss_pred HHHHHcCCCCCCcC-CCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHh
Q 009685 85 EILMAAGADWSLQN-ENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAA 144 (528)
Q Consensus 85 klLL~~GAdvn~~n-~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~ 144 (528)
++|+++|++++.++ ..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..
T Consensus 93 ~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 93 RLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 99999999999998 8999999999999999999999999999999999999999999864
No 69
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.80 E-value=1.6e-19 Score=180.04 Aligned_cols=146 Identities=14% Similarity=0.056 Sum_probs=107.0
Q ss_pred CCCCCCCChHHHHHHHcCCHH-HHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 2 EDFAKYAHSPVHLAVARRDYA-ALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e-~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+..|..|.||||+|+..++.. ++++|+..|++++..+. +.++++.++..++.+++ +++++.++. .|.||||
T Consensus 46 ~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~-~g~t~l~ 124 (269)
T 4b93_B 46 SAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNA-DQAVPLH 124 (269)
T ss_dssp -----------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCT-TCCCHHH
T ss_pred cccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCC-CCCCccc
Confidence 456778999999999888764 78999999999998544 57777777777766655 889999997 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhh
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..+
T Consensus 125 ~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~ 199 (269)
T 4b93_B 125 LACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVF 199 (269)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred cccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999876544
No 70
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.79 E-value=1e-18 Score=170.47 Aligned_cols=144 Identities=15% Similarity=0.015 Sum_probs=127.6
Q ss_pred CCC-CCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 2 EDF-AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 2 N~~-D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
|.. +..|.||||+||..|+.+++++|+++|++++..+. ..++++.++..++.+.+ |++++..|. .|.||||
T Consensus 32 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 110 (285)
T 1wdy_A 32 NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDF-YGFTAFM 110 (285)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TCCBHHH
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCc-ccCCHHH
Confidence 444 77899999999999999999999999999987544 56777676666665544 889999997 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCc----------CCCCCcHHHHHHHcCCHHHHHHHHHh-cCChhHHhhcCCchHHHHH
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQ----------NENGWSALQEAVCTREESIAMIIARH-YQPLAWAKWCRRLPRIVAS 142 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~----------n~~G~TpLh~A~~~g~~eivklLL~~-ga~i~~~~~~g~tPl~lA~ 142 (528)
+|+..|+.+++++|+++|++++.. +..|+||||+|+..|+.+++++|++. +.+++..+..|.||+++|+
T Consensus 111 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~ 190 (285)
T 1wdy_A 111 EAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 190 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHH
T ss_pred HHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 999999999999999999999987 78899999999999999999999997 9999999999999999999
Q ss_pred Hhhh
Q 009685 143 AARI 146 (528)
Q Consensus 143 l~~~ 146 (528)
....
T Consensus 191 ~~~~ 194 (285)
T 1wdy_A 191 LSSD 194 (285)
T ss_dssp HCSC
T ss_pred Hccc
Confidence 7654
No 71
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.79 E-value=2.8e-20 Score=175.97 Aligned_cols=91 Identities=11% Similarity=-0.073 Sum_probs=81.1
Q ss_pred cccccccCCCCCCcHHHHHHHcCC------HHHHHHHHHcCCCCCCcCCCCC-cHHHHHHHcCC-----HHHHHHHHH-h
Q 009685 57 SAVIDRRDVPGRETPLHLAVRLRD------PISAEILMAAGADWSLQNENGW-SALQEAVCTRE-----ESIAMIIAR-H 123 (528)
Q Consensus 57 ga~In~kD~p~G~TPLHlAa~~G~------~e~VklLL~~GAdvn~~n~~G~-TpLh~A~~~g~-----~eivklLL~-~ 123 (528)
|+++|.+|. .|+||||+|+..|+ .+++++|+++||+++.+|..|+ ||||+|+..+. .+++++|+. +
T Consensus 65 Gadvn~~d~-~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~ 143 (186)
T 3t8k_A 65 GADIKSRTK-EGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQS 143 (186)
T ss_dssp TCCSSCCCT-TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTST
T ss_pred CCCCCCCCC-CCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhc
Confidence 577888887 89999999999987 5789999999999999999999 99999998543 568999999 9
Q ss_pred cCChhHHhhcCCchHHHHHHhhhhh
Q 009685 124 YQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 124 ga~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
|++++.++..|+||+++|+..+.+.
T Consensus 144 gad~~~~d~~G~TpL~~A~~~~~~~ 168 (186)
T 3t8k_A 144 GLQLLIKDKWGLTALEFVKRCQKPI 168 (186)
T ss_dssp TCCTTCCCTTSCCHHHHHHTTTCHH
T ss_pred CCCCcccCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999766544
No 72
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.79 E-value=2.1e-19 Score=177.17 Aligned_cols=143 Identities=17% Similarity=0.166 Sum_probs=117.4
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHH----hCCCCCc-----CCCCCchhhHHHHH---hccccc------ccc----
Q 009685 2 EDFAKYAHSPVHLAVARRDYAALRRIIA----TLPRLSK-----AGEVNTEDESLAAE---LQADAV------SAV---- 59 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e~vk~LL~----~ga~v~~-----~~~~~t~l~~~A~~---~~~~~v------ga~---- 59 (528)
+..|.+|.||||+||..|+.++|+.||+ .+++++. .....++++.++.. ++.+++ |++
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 4678999999999999999999888886 4555542 34557777777654 444444 333
Q ss_pred ---ccc----cCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC--------------CCCcHHHHHHHcCCHHHHH
Q 009685 60 ---IDR----RDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNE--------------NGWSALQEAVCTREESIAM 118 (528)
Q Consensus 60 ---In~----kD~p~G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~--------------~G~TpLh~A~~~g~~eivk 118 (528)
++. .|. .|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.++++
T Consensus 87 ~~~i~~~~~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~ 165 (273)
T 2pnn_A 87 KQFVNASYTDSYY-KGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVK 165 (273)
T ss_dssp HHHHTCCCCSTTT-TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHH
T ss_pred hHHhhcccccccC-CCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence 333 565 799999999999999999999999999999987 7999999999999999999
Q ss_pred HHHH---hcCChhHHhhcCCchHHHHHHhh
Q 009685 119 IIAR---HYQPLAWAKWCRRLPRIVASAAR 145 (528)
Q Consensus 119 lLL~---~ga~i~~~~~~g~tPl~lA~l~~ 145 (528)
+|++ +|++++..+..|+||+|+|+...
T Consensus 166 ~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~ 195 (273)
T 2pnn_A 166 FLLQNSWQPADISARDSVGNTVLHALVEVA 195 (273)
T ss_dssp HHHHCSSCCCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHhcccCCCCceeeCCCCCcHHHHHHHcc
Confidence 9999 99999999999999999999743
No 73
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.79 E-value=3.3e-19 Score=185.04 Aligned_cols=148 Identities=17% Similarity=0.174 Sum_probs=127.5
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhC---CCCCcCC-CCCchhhHHHHHh---ccccc------cccccc-----
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATL---PRLSKAG-EVNTEDESLAAEL---QADAV------SAVIDR----- 62 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~g---a~v~~~~-~~~t~l~~~A~~~---~~~~v------ga~In~----- 62 (528)
+|..|..|.||||+|+..|+.+++++|++++ ++++..+ .+.++++.++..+ ..+++ |++++.
T Consensus 192 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~ 271 (373)
T 2fo1_E 192 PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAAR 271 (373)
T ss_dssp SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGG
T ss_pred CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccc
Confidence 4678899999999999999999999999987 6777644 4567776666655 23322 677765
Q ss_pred ---cCCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchH
Q 009685 63 ---RDVPGRETPLHLAVRLRDPISAEILMAAG-ADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPR 138 (528)
Q Consensus 63 ---kD~p~G~TPLHlAa~~G~~e~VklLL~~G-Advn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl 138 (528)
.|. .|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+
T Consensus 272 ~~~~d~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l 350 (373)
T 2fo1_E 272 KDSEKY-KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTAR 350 (373)
T ss_dssp TSSSSC-CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHH
T ss_pred cCcccc-cCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHH
Confidence 565 8999999999999999999999886 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhH
Q 009685 139 IVASAARIRDF 149 (528)
Q Consensus 139 ~lA~l~~~~Df 149 (528)
++|+..+..+.
T Consensus 351 ~~A~~~g~~~i 361 (373)
T 2fo1_E 351 QLAQANNHHNI 361 (373)
T ss_dssp HHHHHTTCHHH
T ss_pred HHHHHcCCHHH
Confidence 99998776554
No 74
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.79 E-value=7.5e-19 Score=170.90 Aligned_cols=113 Identities=14% Similarity=0.120 Sum_probs=102.5
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCH
Q 009685 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDP 81 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~ 81 (528)
+..+..|.||||+||..|+.+++++||+.|+ +++.+|. .|+||||+||..|+.
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~--------------------------~~~~~d~-~g~tpLh~A~~~g~~ 67 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELEVVQQAVKEMN--------------------------DPSQPNE-EGITALHNAICGANY 67 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHHHHHHHHHHSS--------------------------CTTCCCT-TSCCHHHHHHHTTCH
T ss_pred cccccchhHHHHHHHHcCCHHHHHHHHhcCC--------------------------CCCCCCC-CCCCHHHHHHHcCCH
Confidence 3456678899999999999999999999864 5667776 899999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHh-hcCCchHHHH
Q 009685 82 ISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAK-WCRRLPRIVA 141 (528)
Q Consensus 82 e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~-~~g~tPl~lA 141 (528)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+ ..|.||+++|
T Consensus 68 ~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 68 SIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999876 5899999998
No 75
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.79 E-value=8.2e-19 Score=178.13 Aligned_cols=140 Identities=14% Similarity=0.065 Sum_probs=118.9
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHH-hCCCCCcCCC-CCchhhHHHHHhccc----c------ccccccccCCCCCCc
Q 009685 3 DFAKYAHSPVHLAVARRDYAALRRIIA-TLPRLSKAGE-VNTEDESLAAELQAD----A------VSAVIDRRDVPGRET 70 (528)
Q Consensus 3 ~~D~~G~TPLH~Aa~~G~~e~vk~LL~-~ga~v~~~~~-~~t~l~~~A~~~~~~----~------vga~In~kD~p~G~T 70 (528)
..+..|.||||+||..|+.+++++||+ .|++++..+. ..+++++++...... + .|+++|.+|. .|+|
T Consensus 163 ~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~-~g~t 241 (337)
T 4g8k_A 163 RLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE-RGKT 241 (337)
T ss_dssp -CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCG-GGCC
T ss_pred cccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCC-CCCC
Confidence 356789999999999999999999996 5899987544 466676666554321 1 1899999997 9999
Q ss_pred HHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhh
Q 009685 71 PLHLAVRLRDPISAEILMAA-GADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 71 PLHlAa~~G~~e~VklLL~~-GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
|||+|+..|+.+++++|+.. |++++.+|..|+||||+|+..|+.+++++|+++|++++. .+|+++|+..+..+
T Consensus 242 ~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-----~~~L~~A~~~~~~~ 315 (337)
T 4g8k_A 242 PLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC-----GDLVMTARRNYDHS 315 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-----CCHHHHHHHTTCHH
T ss_pred HHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----CCHHHHHHHcCCHH
Confidence 99999999999999999985 899999999999999999999999999999999998764 56999998766443
No 76
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.78 E-value=2.4e-19 Score=179.35 Aligned_cols=140 Identities=11% Similarity=-0.033 Sum_probs=123.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCC-CcHHHHHHHc
Q 009685 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGR-ETPLHLAVRL 78 (528)
Q Consensus 7 ~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G-~TPLHlAa~~ 78 (528)
+|.||||+||..|+.+++++|+++|++++..+. +.++++.++..++.+++ |++++.+|. .| .||||+|+..
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~~t~L~~A~~~ 139 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGK-TGWKTSFYHAVML 139 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSS-SGGGSHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCC-CCCCCHHHHHHHc
Confidence 599999999999999999999999999988544 56777777776666554 899999997 88 7999999999
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCch-HHHHHHhhhhh
Q 009685 79 RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLP-RIVASAARIRD 148 (528)
Q Consensus 79 G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tP-l~lA~l~~~~D 148 (528)
|+.+++++|+++|+++... ..|+||||+|+..|+.+++++|+++|++++..+..|.|| +|+|+..+..+
T Consensus 140 ~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~ 209 (285)
T 3kea_A 140 NDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIE 209 (285)
T ss_dssp TCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHH
T ss_pred CCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHH
Confidence 9999999999999987333 289999999999999999999999999999999999998 99999776544
No 77
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.78 E-value=1.7e-18 Score=164.89 Aligned_cols=145 Identities=22% Similarity=0.149 Sum_probs=117.4
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
++..|.+|.||||+|+..|+.+++++|++.|++++..+. ..++++.++..++.+.+ +++++..+...|.||||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 466788889999999999999999999999888877544 45566555555555544 56666554325889999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhh
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAAR 145 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~ 145 (528)
+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+...
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~ 153 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRT 153 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999888888888999999888544
No 78
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.78 E-value=2.1e-18 Score=161.25 Aligned_cols=140 Identities=16% Similarity=0.115 Sum_probs=123.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCC-CCCcCC-CCCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHH
Q 009685 5 AKYAHSPVHLAVARRDYAALRRIIATLP-RLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAV 76 (528)
Q Consensus 5 D~~G~TPLH~Aa~~G~~e~vk~LL~~ga-~v~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa 76 (528)
+.++.||||.||..|+.++++.||..+. +++..+ ...++++.++..++.+.+ |++++.+|. .|.||||+|+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~ 80 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNS-ISDSPYLYAG 80 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH
Confidence 4678999999999999999999998876 777744 456777777776666554 899999997 8999999999
Q ss_pred HcCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhc-CChhHHhhcCCchHHHHHHhh
Q 009685 77 RLRDPISAEILM-AAGADWSLQNENGWSALQEAVCTREESIAMIIARHY-QPLAWAKWCRRLPRIVASAAR 145 (528)
Q Consensus 77 ~~G~~e~VklLL-~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~g-a~i~~~~~~g~tPl~lA~l~~ 145 (528)
..|+.+++++|+ ..+++++..+..|+||||+|+..|+.+++++|+++| .+++..+..|.||+|+|+...
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSS
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhc
Confidence 999999999999 667899999999999999999999999999999998 899999999999999999654
No 79
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.78 E-value=1.8e-19 Score=176.45 Aligned_cols=111 Identities=18% Similarity=0.143 Sum_probs=103.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHHH
Q 009685 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISA 84 (528)
Q Consensus 5 D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~e~V 84 (528)
+..|.||||+||..|+.++++.||+ |+ ++|.+|. .|+||||+||..|+.+++
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--------------------------~~~~~d~-~g~t~L~~A~~~g~~~~v 93 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DR--------------------------DVDAVDE-NGRTALLFVAGLGSDKCV 93 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TC--------------------------CTTCBCT-TSCBHHHHHHHHTCHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CC--------------------------CCCCcCC-CCCCHHHHHHHCCCHHHH
Confidence 3578999999999999999999998 53 4667786 899999999999999999
Q ss_pred HHHHHcCCCCCCcC-CCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHH
Q 009685 85 EILMAAGADWSLQN-ENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASA 143 (528)
Q Consensus 85 klLL~~GAdvn~~n-~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l 143 (528)
++|+++|++++.++ ..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+.
T Consensus 94 ~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 94 RLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 99999999999998 889999999999999999999999999999999999999999984
No 80
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.78 E-value=1.5e-18 Score=156.42 Aligned_cols=116 Identities=22% Similarity=0.220 Sum_probs=104.9
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHH
Q 009685 4 FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAV 76 (528)
Q Consensus 4 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa 76 (528)
.|..|.||||+|+..|+.+++++|++.|++++..+. ..++++.++..++.+.+ |++++.+|. .|.||||+|+
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 108 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDM-LKMTALHWAT 108 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH
Confidence 578899999999999999999999999999987554 56777777766665544 899999997 9999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Q 009685 77 RLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMII 120 (528)
Q Consensus 77 ~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklL 120 (528)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 109 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 109 EHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999999999999987
No 81
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.78 E-value=1.6e-18 Score=165.08 Aligned_cols=148 Identities=15% Similarity=0.070 Sum_probs=129.6
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC--CCchhhHHHHHhccccc------cccccccCCCCCCcHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE--VNTEDESLAAELQADAV------SAVIDRRDVPGRETPL 72 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~--~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPL 72 (528)
++..|..|.||||+|+..|+.+++++|++.|++++.... ..++++.++..++.+.+ |++++..|. .|.|||
T Consensus 35 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l 113 (240)
T 3eu9_A 35 VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDG-EGCSCI 113 (240)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHH
T ss_pred cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHH
Confidence 467789999999999999999999999999998876332 46777777766665544 889999997 899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC-HHHHHHHHHhcCChhHHhh-cCCchHHHHHHhhhhhH
Q 009685 73 HLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTRE-ESIAMIIARHYQPLAWAKW-CRRLPRIVASAARIRDF 149 (528)
Q Consensus 73 HlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~-~eivklLL~~ga~i~~~~~-~g~tPl~lA~l~~~~Df 149 (528)
|+|+..|+.+++++|+++|++++..+..|+||||+|+..++ .+++++|++.+.+++..+. .|.||+|+|+..+..+.
T Consensus 114 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 192 (240)
T 3eu9_A 114 HLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTV 192 (240)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999997776 8999999999999998886 89999999998765543
No 82
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.77 E-value=8.5e-19 Score=159.57 Aligned_cols=106 Identities=21% Similarity=0.195 Sum_probs=92.2
Q ss_pred chhhHHHHHhccccc-------cccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Q 009685 42 TEDESLAAELQADAV-------SAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREE 114 (528)
Q Consensus 42 t~l~~~A~~~~~~~v-------ga~In~kD~p~G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~ 114 (528)
++++.++..++.+.+ +.+++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 10 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 88 (165)
T 3twr_A 10 RQLLEAAKAGDVETVKKLCTVQSVNCRDIEG-RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHY 88 (165)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTTTTTCCCTTT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHhCCHHHHHHHHHcCCCCcccccc-CCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcH
Confidence 445555555554443 456677776 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhh
Q 009685 115 SIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 115 eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+++++|+++|++++..+..|.||+|+|+..+..+
T Consensus 89 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 122 (165)
T 3twr_A 89 EVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYE 122 (165)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999999999876544
No 83
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.77 E-value=1.9e-18 Score=159.82 Aligned_cols=107 Identities=19% Similarity=0.104 Sum_probs=94.2
Q ss_pred CchhhHHHHHhccccc-------cccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Q 009685 41 NTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTRE 113 (528)
Q Consensus 41 ~t~l~~~A~~~~~~~v-------ga~In~kD~p~G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~ 113 (528)
.++++.++..++.+.+ +.+++..|. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 84 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDD-HGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGH 84 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCcccccccCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 4455566666655444 667899997 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhh
Q 009685 114 ESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 114 ~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
.+++++|+++|++++..+..|.||+|+|+..+..+
T Consensus 85 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 119 (179)
T 3f6q_A 85 RDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQ 119 (179)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999999999999776443
No 84
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.77 E-value=4.9e-19 Score=172.73 Aligned_cols=139 Identities=19% Similarity=0.135 Sum_probs=116.8
Q ss_pred CCCCChHHHHHHHcCCHHHH----HHHHHhCCCCCcC-----CCCCchhhHHH---HHhccccc------c---------
Q 009685 5 AKYAHSPVHLAVARRDYAAL----RRIIATLPRLSKA-----GEVNTEDESLA---AELQADAV------S--------- 57 (528)
Q Consensus 5 D~~G~TPLH~Aa~~G~~e~v----k~LL~~ga~v~~~-----~~~~t~l~~~A---~~~~~~~v------g--------- 57 (528)
+.+|+||||.||..|+.+++ ++|++.|++++.. ..+.++++.++ ..++.+++ |
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 67899999999999999954 4445599998864 33677777666 23444443 3
Q ss_pred --ccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC--------------CCCCcHHHHHHHcCCHHHHHHHH
Q 009685 58 --AVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQN--------------ENGWSALQEAVCTREESIAMIIA 121 (528)
Q Consensus 58 --a~In~kD~p~G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n--------------~~G~TpLh~A~~~g~~eivklLL 121 (528)
..++..|. .|+||||+||..|+.++|++|+++|++++..+ ..|+||||+|+..|+.+++++|+
T Consensus 82 ~~~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 160 (260)
T 3jxi_A 82 INSPFRDVYY-RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT 160 (260)
T ss_dssp HTCCBCCSSE-ESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hccccccccc-CCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 33455565 79999999999999999999999999999998 68999999999999999999999
Q ss_pred H---hcCChhHHhhcCCchHHHHHHh
Q 009685 122 R---HYQPLAWAKWCRRLPRIVASAA 144 (528)
Q Consensus 122 ~---~ga~i~~~~~~g~tPl~lA~l~ 144 (528)
+ +|++++..+..|+||+|+|+..
T Consensus 161 ~~~~~ga~~~~~d~~g~TpLh~A~~~ 186 (260)
T 3jxi_A 161 ENGHKQADLRRQDSRGNTVLHALVAI 186 (260)
T ss_dssp HCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred hccccCCCCcccCCCCCcHHHHHHHh
Confidence 9 9999999999999999999964
No 85
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.77 E-value=4.8e-18 Score=172.47 Aligned_cols=144 Identities=15% Similarity=0.027 Sum_probs=112.0
Q ss_pred CCCCCC-CCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCC-CchhhHHHHHhccccc------cccccccCCCCCCcHH
Q 009685 1 MEDFAK-YAHSPVHLAVARRDYAALRRIIATLPRLSKAGEV-NTEDESLAAELQADAV------SAVIDRRDVPGRETPL 72 (528)
Q Consensus 1 IN~~D~-~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~-~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPL 72 (528)
+|.++. .|+||||+||..|+.+++++||++|++++..... .++.+.++.......+ +++++..|. .|.|||
T Consensus 51 vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~g~t~l 129 (337)
T 4g8k_A 51 VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDF-YGFTAF 129 (337)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCT-TCCBHH
T ss_pred CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhcc-CCCCHH
Confidence 345554 4788888888888888888888888888775544 3333333333322211 678888997 899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCc----------CCCCCcHHHHHHHcCCHHHHHHHHH-hcCChhHHhhcCCchHHHH
Q 009685 73 HLAVRLRDPISAEILMAAGADWSLQ----------NENGWSALQEAVCTREESIAMIIAR-HYQPLAWAKWCRRLPRIVA 141 (528)
Q Consensus 73 HlAa~~G~~e~VklLL~~GAdvn~~----------n~~G~TpLh~A~~~g~~eivklLL~-~ga~i~~~~~~g~tPl~lA 141 (528)
|+|+..|+.+++++|+++|++++.. +..|+||||+|+..|+.+++++|+. .|++++..+..|.+|++.+
T Consensus 130 ~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~ 209 (337)
T 4g8k_A 130 MEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHA 209 (337)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHH
Confidence 9999999999999999999998754 3468999999999999999999996 5899999999999999887
Q ss_pred HHhh
Q 009685 142 SAAR 145 (528)
Q Consensus 142 ~l~~ 145 (528)
+...
T Consensus 210 ~~~~ 213 (337)
T 4g8k_A 210 LLSS 213 (337)
T ss_dssp HHHS
T ss_pred HHHc
Confidence 7643
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.77 E-value=2.5e-18 Score=152.32 Aligned_cols=97 Identities=26% Similarity=0.319 Sum_probs=90.1
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~ 80 (528)
+|..|..|.||||+||..|+.+++++|+++| ++++.+|. .|.||||+|+..|+
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--------------------------~~~~~~d~-~g~t~L~~A~~~~~ 92 (136)
T 2jab_A 40 VNAKDEYGLTPLYLATAHGHLEIVEVLLKNG--------------------------ADVNAVDA-IGFTPLHLAAFIGH 92 (136)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCT-TCCCHHHHHHHHTC
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCcCCC-CCCCHHHHHHHcCC
Confidence 4678899999999999999999999999985 45667776 89999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 009685 81 PISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHY 124 (528)
Q Consensus 81 ~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~g 124 (528)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 93 ~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 93 LEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999875
No 87
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.76 E-value=2.3e-18 Score=155.03 Aligned_cols=120 Identities=15% Similarity=0.185 Sum_probs=107.5
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHH
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|..|.||||+ |..|+.+++++|+++|++++..+. +.++++.++..++.+.+ |++++.+|. .|+||||
T Consensus 29 ~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 106 (156)
T 1bd8_A 29 PDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDG-TGALPIH 106 (156)
T ss_dssp TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCHHH
T ss_pred ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCcHHH
Confidence 46778999999999 999999999999999999988554 56777776666665544 899999997 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHh
Q 009685 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARH 123 (528)
Q Consensus 74 lAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ 123 (528)
+|+..|+.+++++|+++ ++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 107 ~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 107 LAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999999 99999999999999999999999999999864
No 88
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.76 E-value=1e-18 Score=154.87 Aligned_cols=98 Identities=15% Similarity=0.115 Sum_probs=91.4
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCC-CCcHHHHHHHcC
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPG-RETPLHLAVRLR 79 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~-G~TPLHlAa~~G 79 (528)
+|..|..|.||||+|+. |+.+++++|+++| ++++.+|. . |+||||+|+..|
T Consensus 38 ~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g--------------------------~~~~~~~~-~~g~t~L~~A~~~~ 89 (136)
T 1d9s_A 38 PNALNRFGRRPIQVMMM-GSAQVAELLLLHG--------------------------AEPNCADP-ATLTRPVHDAAREG 89 (136)
T ss_dssp TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHT--------------------------CCSSCCBT-TTTBCHHHHHHHHT
T ss_pred cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCC--------------------------CCCCCcCC-CCCCCHHHHHHHcC
Confidence 46788999999999999 9999999999996 45667776 7 999999999999
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCC
Q 009685 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (528)
Q Consensus 80 ~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~ 126 (528)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 90 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 90 FLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999875
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.74 E-value=1.3e-17 Score=143.46 Aligned_cols=99 Identities=23% Similarity=0.330 Sum_probs=92.1
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~ 80 (528)
++..|..|.||||+|+..|+.+++++|+++| ++++.+|. .|.||||+|+..|+
T Consensus 28 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--------------------------~~~~~~~~-~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 28 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAG--------------------------ADVNAKDK-NGRTPLHLAARNGH 80 (126)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCT-TSCCHHHHHHHTTC
T ss_pred CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC--------------------------CCCcccCC-CCCcHHHHHHHcCh
Confidence 4667899999999999999999999999985 44667776 89999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCC
Q 009685 81 PISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (528)
Q Consensus 81 ~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~ 126 (528)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999875
No 90
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.73 E-value=6.9e-18 Score=171.18 Aligned_cols=131 Identities=16% Similarity=0.111 Sum_probs=91.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCCCCc-------CCCCCchhhHHHHH---hccccc------cccccccCCCCCCcH
Q 009685 8 AHSPVHLAVARRDYAALRRIIATLPRLSK-------AGEVNTEDESLAAE---LQADAV------SAVIDRRDVPGRETP 71 (528)
Q Consensus 8 G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~-------~~~~~t~l~~~A~~---~~~~~v------ga~In~kD~p~G~TP 71 (528)
+.++||.|+..|+.+.++.||..|++++. .....++++.++.. +..+++ |+++|.+|. .|+||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~-~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCT-TCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCC-CCCCH
Confidence 34679999999999999999999988875 22335555555443 222222 677777776 77777
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhh
Q 009685 72 LHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAAR 145 (528)
Q Consensus 72 LHlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~ 145 (528)
||+|+..|+.+++++||++||+++.+|..|+||||+|+..|+.+++++|+++|++ .|.||+|+|+..+
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWV 297 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcC
Confidence 7777777777777777777777777777777777777777777777777776653 4677777776543
No 91
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.73 E-value=1.7e-18 Score=168.39 Aligned_cols=127 Identities=13% Similarity=0.081 Sum_probs=110.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHH
Q 009685 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVR 77 (528)
Q Consensus 5 D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~ 77 (528)
+..|.||||+||..|+.+++++||+.|++++..+. ..+++|.++..++.+++ |+++|.+|. .|+||||+|+.
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~tpL~~A~~ 112 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADS-DGWTPLHCAAS 112 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHH
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHH
Confidence 35678999999999999999999999999988544 57777777777766555 899999998 99999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCcCCCCC-cHHHHH--HHcCCHHHHHHHHHhcCChhHHhh
Q 009685 78 LRDPISAEILMAAGADWSLQNENGW-SALQEA--VCTREESIAMIIARHYQPLAWAKW 132 (528)
Q Consensus 78 ~G~~e~VklLL~~GAdvn~~n~~G~-TpLh~A--~~~g~~eivklLL~~ga~i~~~~~ 132 (528)
.|+.+++++|+++|++++.++..|. ||||+| +..|+.+++++|+.++++++..+.
T Consensus 113 ~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~ 170 (239)
T 1ycs_B 113 CNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNK 170 (239)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGG
T ss_pred cCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccccccc
Confidence 9999999999999999999998877 999999 788999999999999988776544
No 92
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.72 E-value=1.8e-17 Score=166.22 Aligned_cols=98 Identities=16% Similarity=0.210 Sum_probs=91.5
Q ss_pred CCCCCCCChHHHHHHHc---CCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHc
Q 009685 2 EDFAKYAHSPVHLAVAR---RDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRL 78 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~---G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~ 78 (528)
+..|..|.||||+||.. |+.+++++||++| +++|.+|. .|+||||+|+..
T Consensus 163 ~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g--------------------------a~in~~d~-~g~TpLh~A~~~ 215 (278)
T 1dcq_A 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS--------------------------GNLDKQTG-KGSTALHYCCLT 215 (278)
T ss_dssp SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC--------------------------SCTTCCCT-TCCCHHHHHHHT
T ss_pred cccccCCCCcchHHHHhcccchHHHHHHHHHCC--------------------------CCccccCC-CCCCHHHHHHHc
Confidence 45588999999999999 8999999999995 45777887 899999999999
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCC
Q 009685 79 RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (528)
Q Consensus 79 G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~ 126 (528)
|+.+++++||++||+++.+|..|+||||+|+..|+.+++++|+++|+.
T Consensus 216 g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 216 DNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999998874
No 93
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.72 E-value=1.5e-17 Score=142.77 Aligned_cols=92 Identities=25% Similarity=0.285 Sum_probs=82.9
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCH
Q 009685 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDP 81 (528)
Q Consensus 2 N~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~ 81 (528)
+..|.+|.||||+||..|+.+++++|+++| ++++.+|. .|+||||+||..|+.
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--------------------------~~i~~~d~-~g~tpLh~A~~~~~~ 70 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANG--------------------------ADVAAKDK-NGSTPLHLAARNGHL 70 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCT-TCCCHHHHHHHTTCH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCccCC-CCCCHHHHHHHcCCH
Confidence 456889999999999999999999999985 45667776 899999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Q 009685 82 ISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMII 120 (528)
Q Consensus 82 e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklL 120 (528)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 71 ~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 71 EVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999999999999999999887
No 94
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.72 E-value=2.4e-18 Score=167.27 Aligned_cols=113 Identities=18% Similarity=0.141 Sum_probs=103.2
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~ 80 (528)
+|..|..|.||||+||..|+.+++++||+.| ++++.+|. .|+||||+|+..|+
T Consensus 47 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g--------------------------a~~n~~d~-~g~tpLh~A~~~g~ 99 (229)
T 2vge_A 47 PSQPNEEGITALHNAICGANYSIVDFLITAG--------------------------ANVNSPDS-HGWTPLHCAASCND 99 (229)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTCCCT-TCCCHHHHHHHTTC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC--------------------------CCCCCCCC-CCCCHHHHHHHcCC
Confidence 4678999999999999999999999999985 45677786 89999999999999
Q ss_pred HHHHHHHHHcCCCCCCcC-CCCCcHHHHH--HHcCCHHHHHHHHHhcCChhHHhhcCCchHHH
Q 009685 81 PISAEILMAAGADWSLQN-ENGWSALQEA--VCTREESIAMIIARHYQPLAWAKWCRRLPRIV 140 (528)
Q Consensus 81 ~e~VklLL~~GAdvn~~n-~~G~TpLh~A--~~~g~~eivklLL~~ga~i~~~~~~g~tPl~l 140 (528)
.+++++|+++|++++.++ ..|+||||+| +..|+.+++++|+++|++++..+..+.+|++.
T Consensus 100 ~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~ 162 (229)
T 2vge_A 100 TVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWD 162 (229)
T ss_dssp HHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSC
T ss_pred HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHH
Confidence 999999999999999996 6999999999 99999999999999999998888777777664
No 95
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.70 E-value=8.3e-17 Score=161.28 Aligned_cols=120 Identities=21% Similarity=0.173 Sum_probs=107.8
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHc---CCHHHHH
Q 009685 9 HSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRL---RDPISAE 85 (528)
Q Consensus 9 ~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~---G~~e~Vk 85 (528)
.++||.|+..|+.+.+..++..|++++.. ..++..|. .|+||||+|+.. |+.++++
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~--------------------~~l~~~~~-~g~t~Lh~A~~~~~~~~~~~v~ 189 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEK--------------------IPLANGHE-PDETALHLAVRSVDRTSLHIVD 189 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSB--------------------CCCSSCSS-TTCBHHHHHHHHCCTTTHHHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhh--------------------cccccccc-CCCCcchHHHHhcccchHHHHH
Confidence 36899999999999999999998776421 12566676 899999999999 8999999
Q ss_pred HHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 86 ILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 86 lLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+.
T Consensus 190 ~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~ 253 (278)
T 1dcq_A 190 FLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHC 253 (278)
T ss_dssp HHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999998765543
No 96
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.70 E-value=3.1e-17 Score=163.38 Aligned_cols=123 Identities=21% Similarity=0.205 Sum_probs=110.0
Q ss_pred CCCCCCCCChHHHHHH-----HcCCHHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccccc------cccccccCCCCC
Q 009685 1 MEDFAKYAHSPVHLAV-----ARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGR 68 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa-----~~G~~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G 68 (528)
+|..|..|.||||+|+ ..++.++++.|+..|...+..+. +.++++.++..++.+++ |+++|.+|. .|
T Consensus 138 ~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~-~G 216 (276)
T 4hbd_A 138 VDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDD-DG 216 (276)
T ss_dssp TTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TS
T ss_pred CCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CC
Confidence 4678899999999999 66899999999999988777544 57777777777766554 899999997 99
Q ss_pred CcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 009685 69 ETPLHLAVRLRDPISAEILMA-AGADWSLQNENGWSALQEAVCTREESIAMIIARHY 124 (528)
Q Consensus 69 ~TPLHlAa~~G~~e~VklLL~-~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~g 124 (528)
+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 217 ~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 217 STALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999999999999999 89999999999999999999999999999999875
No 97
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.70 E-value=4e-17 Score=176.32 Aligned_cols=105 Identities=21% Similarity=0.178 Sum_probs=89.6
Q ss_pred CCCCChHHHHHHH---cCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCH
Q 009685 5 AKYAHSPVHLAVA---RRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDP 81 (528)
Q Consensus 5 D~~G~TPLH~Aa~---~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~ 81 (528)
|..|.||||+||. .|+.+++++||++| +++|.+|. .|+||||+||..|+.
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g--------------------------a~vn~~d~-~g~TpLh~A~~~g~~ 220 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNG--------------------------GHLDAKAA-DGNTALHYAALYNQP 220 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHS--------------------------CCTTCCCS-SSCCHHHHHTTTTCH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcC--------------------------CCCCccCC-CCCcHHHHHHHcCCH
Confidence 7899999999977 89999999999995 56777887 899999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHH
Q 009685 82 ISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVAS 142 (528)
Q Consensus 82 e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~ 142 (528)
+++++||++||+++.+|..|+||||+|+..|+.+++++|+++|++++. +|+|++.
T Consensus 221 ~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 221 DCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDY 275 (497)
T ss_dssp HHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeec
Confidence 999999999999999999999999999999999999999999999775 5776654
No 98
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.70 E-value=4.7e-17 Score=170.21 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=100.0
Q ss_pred CCChHHHHHHHc-CCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccC--CCCCCcHHHHHHHcCCHHH
Q 009685 7 YAHSPVHLAVAR-RDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRD--VPGRETPLHLAVRLRDPIS 83 (528)
Q Consensus 7 ~G~TPLH~Aa~~-G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD--~p~G~TPLHlAa~~G~~e~ 83 (528)
.+.|+||+|+.. |+.++++.||.+|+++ |..| . .|.||||+||..|+.++
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv--------------------------n~~~~~~-~g~TpLh~Aa~~g~~~i 250 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADV--------------------------NWVNGGQ-DNATPLIQATAANSLLA 250 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCT--------------------------TCCCTTT-TCCCHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCC--------------------------Ccccccc-CCCCHHHHHHHCCCHHH
Confidence 456899999999 9999999999997654 4444 4 68899999999999999
Q ss_pred HHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 84 AEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 84 VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+++||++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+.
T Consensus 251 v~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~i 316 (368)
T 3jue_A 251 CEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADI 316 (368)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHH
Confidence 999999999999999999999999999999999999999999998888899999999887665544
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.68 E-value=2.8e-17 Score=157.20 Aligned_cols=108 Identities=14% Similarity=0.053 Sum_probs=85.8
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~ 80 (528)
+|..|..|.||||+||..|+.+++++||+.+ |++++.+|. .|+||||+|+..|+
T Consensus 99 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-------------------------g~~~~~~d~-~g~tpL~~A~~~~~ 152 (222)
T 3ehr_A 99 VNGLDKAGSTALYWACHGGHKDIVEMLFTQP-------------------------NIELNQQNK-LGDTALHAAAWKGY 152 (222)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHTTST-------------------------TCCCCCCCT-TSCCHHHHHHHHTC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHcCC-------------------------CCCccccCC-CCCCHHHHHHHcCC
Confidence 4678999999999999999999999999872 356778887 89999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcC
Q 009685 81 PISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCR 134 (528)
Q Consensus 81 ~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g 134 (528)
.+++++|+++|++++.+|..|+||||+|+..|+.++++.|+..++.....+..+
T Consensus 153 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 153 ADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp HHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred HHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence 999999999999999999999999999999999999999999988877655443
No 100
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.67 E-value=1.4e-16 Score=172.05 Aligned_cols=120 Identities=13% Similarity=0.116 Sum_probs=105.7
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHH---cCCHHHHH
Q 009685 9 HSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVR---LRDPISAE 85 (528)
Q Consensus 9 ~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~---~G~~e~Vk 85 (528)
.+.||.|+..|+.++++.||..|++++.... ....|. .|+||||+||. .|+.++++
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~--------------------~~~~~~-~g~t~Lh~A~~~a~~g~~~~v~ 191 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLP--------------------GPDAQA-PEELVLHLAVKVANQASLPLVD 191 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBC--------------------CSSSCC-SCBCHHHHHHHTCCTTTHHHHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCC--------------------Cccccc-ccchHHHHHHHhcccccHHHHH
Confidence 3679999999999999999999877653211 112254 79999999977 89999999
Q ss_pred HHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 86 ILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 86 lLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+||++||+++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..+.
T Consensus 192 ~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~ 255 (497)
T 3lvq_E 192 FIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKEC 255 (497)
T ss_dssp HHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999998765554
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.66 E-value=3.4e-16 Score=135.90 Aligned_cols=83 Identities=22% Similarity=0.251 Sum_probs=76.6
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~ 80 (528)
+|..|..|.||||+||..|+.+++++|+++| ++++.+|. .|+||||+|+..|+
T Consensus 33 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--------------------------~~~~~~d~-~g~tpL~~A~~~~~ 85 (123)
T 3aaa_C 33 VNRTLEGGRKPLHYAADCGQLEILEFLLLKG--------------------------ADINAPDK-HHITPLLSAVYEGH 85 (123)
T ss_dssp TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT--------------------------CCTTCCCT-TSCCHHHHHHHHTC
T ss_pred cCccCCCCCcHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCcCCC-CCCCHHHHHHHcCC
Confidence 4678899999999999999999999999985 45677786 89999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Q 009685 81 PISAEILMAAGADWSLQNENGWSALQEAVC 110 (528)
Q Consensus 81 ~e~VklLL~~GAdvn~~n~~G~TpLh~A~~ 110 (528)
.+++++|+++|++++.+|..|+||||+|+.
T Consensus 86 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 86 VSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 999999999999999999999999999943
No 102
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.65 E-value=7.1e-17 Score=164.67 Aligned_cols=137 Identities=12% Similarity=0.025 Sum_probs=107.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-----------------CCchhhHHHHHhccc-c------c
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-----------------VNTEDESLAAELQAD-A------V 56 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~-----------------~~t~l~~~A~~~~~~-~------v 56 (528)
|+..|..|.|++| |+.++++.||++|++.+.... .....++++...... . .
T Consensus 45 i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~ 119 (327)
T 1sw6_A 45 IMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNT 119 (327)
T ss_dssp CEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTS
T ss_pred cccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhc
Confidence 4567889999988 999999999999977654110 000011222222221 1 1
Q ss_pred cccccc-cCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC---HHHHHHHHHhc-CChhHHh
Q 009685 57 SAVIDR-RDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTRE---ESIAMIIARHY-QPLAWAK 131 (528)
Q Consensus 57 ga~In~-kD~p~G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~---~eivklLL~~g-a~i~~~~ 131 (528)
|+++|. +|. .|+||||+||..|+.++|++||++||+++.+|..|+||||+|+..|+ .+++..|++++ ++++..+
T Consensus 120 g~dvn~~~d~-~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d 198 (327)
T 1sw6_A 120 QLNLNIPVDE-HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED 198 (327)
T ss_dssp CCCSCSCCST-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEEC
T ss_pred CCCcccccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCC
Confidence 799999 897 99999999999999999999999999999999999999999999998 68888888876 7788999
Q ss_pred hcCCchHHHHHH
Q 009685 132 WCRRLPRIVASA 143 (528)
Q Consensus 132 ~~g~tPl~lA~l 143 (528)
..|.||+|+|+.
T Consensus 199 ~~g~tpLh~A~~ 210 (327)
T 1sw6_A 199 SMNRTILHHIII 210 (327)
T ss_dssp TTCCCHHHHHHH
T ss_pred CCCCCHHHHHHH
Confidence 999999999987
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.65 E-value=5.3e-16 Score=162.21 Aligned_cols=99 Identities=20% Similarity=0.213 Sum_probs=90.5
Q ss_pred CCCCC--CCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHc
Q 009685 1 MEDFA--KYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRL 78 (528)
Q Consensus 1 IN~~D--~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~ 78 (528)
+|..+ .+|.||||+||..|+.+++++||++| +++|.+|. .|+||||+|+..
T Consensus 226 vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G--------------------------advn~~d~-~G~TpLh~A~~~ 278 (368)
T 3jue_A 226 VNWVNGGQDNATPLIQATAANSLLACEFLLQNG--------------------------ANVNQADS-AGRGPLHHATIL 278 (368)
T ss_dssp TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTCCCT-TSCCHHHHHHHH
T ss_pred CCccccccCCCCHHHHHHHCCCHHHHHHHHHcC--------------------------CCCCCCCC-CCCCHHHHHHHc
Confidence 35556 88999999999999999999999985 45777786 899999999999
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCC
Q 009685 79 RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (528)
Q Consensus 79 G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~ 126 (528)
|+.+++++||++||+++.+|..|+||||+|+..|+.+++++|+.++..
T Consensus 279 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999987644
No 104
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.64 E-value=5.2e-17 Score=143.59 Aligned_cols=97 Identities=14% Similarity=0.173 Sum_probs=85.6
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~ 80 (528)
+|..|..|.||||+||..|+.+++++|+++| ++++.+|. .|.||||+|+..|+
T Consensus 36 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~~~~~ 88 (137)
T 3c5r_A 36 PNVKDHAGWTPLHEACNHGHLKVVELLLQHK--------------------------ALVNTTGY-QNDSPLHDAAKNGH 88 (137)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTCCCG-GGCCHHHHHHHTTC
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC--------------------------CcccCcCC-CCCCHHHHHHHcCC
Confidence 4678899999999999999999999999985 45667776 89999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 009685 81 PISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHY 124 (528)
Q Consensus 81 ~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~g 124 (528)
.+++++|+++|++++.+|..|+||||+|+..+..+++.+|.+..
T Consensus 89 ~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 89 VDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 99999999999999999999999999999888888887776544
No 105
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.64 E-value=6.4e-16 Score=143.86 Aligned_cols=106 Identities=20% Similarity=0.238 Sum_probs=90.8
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccC-CCCCCcHHHHHHHcC
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRD-VPGRETPLHLAVRLR 79 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD-~p~G~TPLHlAa~~G 79 (528)
+|..|..|.||||+||..|+.+++++|+++|+ +++.+| . .|+||||+|+..|
T Consensus 69 ~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga--------------------------~~~~~~~~-~g~tpL~~A~~~~ 121 (183)
T 3deo_A 69 VDAVDENGRTALLFVAGLGSDKCVRLLAEAGA--------------------------DLDHRDMR-GGLTALHMAAGYV 121 (183)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC--------------------------CTTCCCSS-SSCCHHHHHHHTT
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC--------------------------CCCcCCCC-CCCCHHHHHHhcC
Confidence 47789999999999999999999999999964 455666 4 7999999999999
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhHH
Q 009685 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFY 150 (528)
Q Consensus 80 ~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df~ 150 (528)
+.+++++|+++|++++.+|..|+||||+|+..++. ..+.+|+++++..+..+..
T Consensus 122 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~ 175 (183)
T 3deo_A 122 RPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVI 175 (183)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHH
Confidence 99999999999999999999999999999874322 3567888888877655543
No 106
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.64 E-value=6.2e-16 Score=151.22 Aligned_cols=106 Identities=20% Similarity=0.250 Sum_probs=91.2
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009685 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 IN~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~ 80 (528)
+|..|..|.||||+||..|+.+++++||++|+ +++.+|...|+||||+|+..|+
T Consensus 70 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga--------------------------~~~~~~~~~g~t~L~~A~~~g~ 123 (244)
T 3ui2_A 70 VDAVDENGRTALLFVAGLGSDKCVRLLAEAGA--------------------------DLDHRDMRGGLTALHMAAGYVR 123 (244)
T ss_dssp TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC--------------------------CTTCCCSSSCCCHHHHHHHTTC
T ss_pred CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC--------------------------CCCcCCCCCCCCHHHHHHHcCC
Confidence 57889999999999999999999999999964 4556662279999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhhH
Q 009685 81 PISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 81 ~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
.+++++|+++|++++.+|..|+||||+|+..++ ...+.+|+++++..+..+.
T Consensus 124 ~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~i 175 (244)
T 3ui2_A 124 PEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKV 175 (244)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHH
Confidence 999999999999999999999999999985322 2467899999998766553
No 107
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.64 E-value=7.7e-17 Score=152.22 Aligned_cols=126 Identities=10% Similarity=-0.015 Sum_probs=106.2
Q ss_pred CCCC-CCCChHHHHHHHcCC----HHHHHHHHHhCCCCCcCCC-CCchhhHHHHHhccc------cc------ccccccc
Q 009685 2 EDFA-KYAHSPVHLAVARRD----YAALRRIIATLPRLSKAGE-VNTEDESLAAELQAD------AV------SAVIDRR 63 (528)
Q Consensus 2 N~~D-~~G~TPLH~Aa~~G~----~e~vk~LL~~ga~v~~~~~-~~t~l~~~A~~~~~~------~v------ga~In~k 63 (528)
|..+ ..|+||||+|+.+|+ .+++++||++|++++..+. +.+++|.++..++.+ ++ |+++|.+
T Consensus 31 ~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~ 110 (186)
T 3t8k_A 31 EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITAL 110 (186)
T ss_dssp SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSC
T ss_pred ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCcc
Confidence 3444 679999999999985 9999999999999998554 577777766665422 12 9999999
Q ss_pred CCCCCC-cHHHHHHHcCC-----HHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChh
Q 009685 64 DVPGRE-TPLHLAVRLRD-----PISAEILMA-AGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLA 128 (528)
Q Consensus 64 D~p~G~-TPLHlAa~~G~-----~e~VklLL~-~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~ 128 (528)
|. .|+ ||||+|+..+. .+++++|++ +||+++.+|..|+||||+|+..|+.+++++|..+....+
T Consensus 111 d~-~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 111 YK-PYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp BG-GGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred CC-CcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 98 899 99999999554 569999999 999999999999999999999999999999998754433
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.64 E-value=7.4e-16 Score=127.55 Aligned_cols=83 Identities=23% Similarity=0.251 Sum_probs=77.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhh
Q 009685 67 GRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 67 ~G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~ 146 (528)
+|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred hhH
Q 009685 147 RDF 149 (528)
Q Consensus 147 ~Df 149 (528)
.+.
T Consensus 81 ~~~ 83 (93)
T 1n0q_A 81 LEV 83 (93)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 109
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.58 E-value=1.7e-15 Score=137.12 Aligned_cols=107 Identities=18% Similarity=0.147 Sum_probs=96.1
Q ss_pred CCchhhHHHHHhccccc------cccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCc-HHHHHHHcC
Q 009685 40 VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWS-ALQEAVCTR 112 (528)
Q Consensus 40 ~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~G~T-pLh~A~~~g 112 (528)
..++++.++..++.+.+ |++++.+|. .|+||||+|+ .|+.+++++|+++|++++.+|..|+| |||+|+..|
T Consensus 12 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~ 89 (156)
T 1bi7_B 12 SADWLATAAARGRVEEVRALLEAGANPNAPNS-YGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREG 89 (156)
T ss_dssp STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCS-SSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHT
T ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCC
Confidence 46677777777666554 889999997 8999999995 99999999999999999999999999 999999999
Q ss_pred CHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhh
Q 009685 113 EESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 113 ~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+.+++++|+++|++++..+..|.||+++|+..+..+
T Consensus 90 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 125 (156)
T 1bi7_B 90 FLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRD 125 (156)
T ss_dssp CHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHH
T ss_pred CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHH
Confidence 999999999999999999999999999999876544
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.53 E-value=1.6e-15 Score=158.90 Aligned_cols=119 Identities=12% Similarity=-0.027 Sum_probs=90.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHHH
Q 009685 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISA 84 (528)
Q Consensus 5 D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~e~V 84 (528)
+..+.||||+||..|+.+++++|++.|+... ..+..+. .|.||||+||..|+.++|
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~-----------------------~~~~~~~-~~~tpL~~Aa~~G~~eiv 144 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDE-----------------------IVKVIQA-ENYQAFRLAAENGHLHVL 144 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCS-----------------------SCC--CH-HHHHHHHHHHHTTCHHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHH-----------------------HHHHhcc-CCCCHHHHHHHcCCHHHH
Confidence 3456799999999999999999999875211 1112232 467899999999999999
Q ss_pred HHHHHcCCCC---CCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhH--HhhcCCchHHHHH-Hhhhhh
Q 009685 85 EILMAAGADW---SLQNENGWSALQEAVCTREESIAMIIARHYQPLAW--AKWCRRLPRIVAS-AARIRD 148 (528)
Q Consensus 85 klLL~~GAdv---n~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~--~~~~g~tPl~lA~-l~~~~D 148 (528)
++|+++|+++ +..+.+ +||||+|+..|+.+++++|+++|++++. .+..|.||+|+|+ ..+..+
T Consensus 145 ~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~e 213 (376)
T 2aja_A 145 NRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHN 213 (376)
T ss_dssp HHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHH
T ss_pred HHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHH
Confidence 9999999762 333333 8999999999999999999999988877 7888889999998 766544
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.53 E-value=1.4e-14 Score=123.98 Aligned_cols=89 Identities=17% Similarity=0.094 Sum_probs=79.8
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHH
Q 009685 60 IDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRI 139 (528)
Q Consensus 60 In~kD~p~G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~ 139 (528)
....|. .|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||++
T Consensus 17 ~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 17 GSHMGS-DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp -----C-CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccccCC-ccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 555665 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhH
Q 009685 140 VASAARIRDF 149 (528)
Q Consensus 140 lA~l~~~~Df 149 (528)
+|+..+..+.
T Consensus 96 ~A~~~~~~~~ 105 (110)
T 2zgd_A 96 ISIDNGNEDL 105 (110)
T ss_dssp HHHHHTCHHH
T ss_pred HHHHcCCHHH
Confidence 9998775554
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.48 E-value=3.2e-14 Score=121.74 Aligned_cols=85 Identities=18% Similarity=0.179 Sum_probs=79.8
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCChhHHhhcCCchHHHHH
Q 009685 63 RDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVAS 142 (528)
Q Consensus 63 kD~p~G~TPLHlAa~~G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~ 142 (528)
+|. .|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+
T Consensus 5 ~d~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSK-DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSC-SSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 465 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhh
Q 009685 143 AARIRD 148 (528)
Q Consensus 143 l~~~~D 148 (528)
..+..+
T Consensus 84 ~~~~~~ 89 (115)
T 2l6b_A 84 KNGHHE 89 (115)
T ss_dssp TTTCHH
T ss_pred HCCCHH
Confidence 766443
No 113
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.47 E-value=8.4e-14 Score=141.05 Aligned_cols=92 Identities=13% Similarity=0.143 Sum_probs=85.4
Q ss_pred cccccc------cCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhcCCh
Q 009685 57 SAVIDR------RDVPGRETPLHLAVRL---RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPL 127 (528)
Q Consensus 57 ga~In~------kD~p~G~TPLHlAa~~---G~~e~VklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eivklLL~~ga~i 127 (528)
|++++. .|. .|+||||+||.. |+.+++++||++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 174 g~d~~~~~~~~~~~~-~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~ 252 (301)
T 2b0o_E 174 GQDFGQPLPGPDAQA-PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALV 252 (301)
T ss_dssp TCCTTSCEECSSSCS-CEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCC
T ss_pred CCcccccCCCcccCC-CCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 778887 576 899999999997 8999999999999999999999999999999999999999999999999
Q ss_pred hHHhhcCCchHHHHHHhhhhhH
Q 009685 128 AWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 128 ~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+..+..|.||+++|+..+..+.
T Consensus 253 ~~~d~~G~TpL~~A~~~~~~~i 274 (301)
T 2b0o_E 253 GTVNEAGETALDIARKKHHKEC 274 (301)
T ss_dssp SCCCTTSCCHHHHHHHHTCHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999998765543
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.46 E-value=1.9e-15 Score=158.42 Aligned_cols=114 Identities=11% Similarity=0.004 Sum_probs=93.2
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHH
Q 009685 3 DFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPI 82 (528)
Q Consensus 3 ~~D~~G~TPLH~Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~e 82 (528)
..+..|.||||+||.+|+.+++++|+++|+++. .++++ +. . .||||+||..|+.+
T Consensus 123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~---------------------~~~i~--~~-~-~TpLh~Aa~~G~~e 177 (376)
T 2aja_A 123 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEI---------------------MAMIQ--AE-N-YHAFRLAAENGHLH 177 (376)
T ss_dssp --CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTH---------------------HHHHS--HH-H-HHHHHHHHHTTCHH
T ss_pred HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCcc---------------------ccccC--CC-C-CCHHHHHHHCCCHH
Confidence 445678899999999999999999999986432 01122 22 2 79999999999999
Q ss_pred HHHHHHHcCCCCCC--cCCCCCcHHHHHH-HcCCHHHHHHHHHhcCChhHHhhcCCchHHHHHHhhhhh
Q 009685 83 SAEILMAAGADWSL--QNENGWSALQEAV-CTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 83 ~VklLL~~GAdvn~--~n~~G~TpLh~A~-~~g~~eivklLL~~ga~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+|++|+++|++++. .|..|+||||+|+ ..|+.+++++|+++|+ .+.||+++|+..+..+
T Consensus 178 iv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~e 239 (376)
T 2aja_A 178 VLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKY 239 (376)
T ss_dssp HHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTT
T ss_pred HHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHH
Confidence 99999999999887 8889999999999 9999999999998763 2678999888665443
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=26.00 E-value=1.7e+02 Score=30.57 Aligned_cols=62 Identities=21% Similarity=0.187 Sum_probs=38.4
Q ss_pred HHHcCCHHHHHHHHHhCCCCCcCCCCCchhhHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 009685 15 AVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISAEILMA 89 (528)
Q Consensus 15 Aa~~G~~e~vk~LL~~ga~v~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAa~~G~~e~VklLL~ 89 (528)
.+..|+...|+.-|..|.+++..- .....+.-+ ..+..|. |.|-+|+|++..+.+++..|+.
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~l----t~~e~~lln-------~~~af~~--g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQL----TADEVRLLN-------RPSAFDV--GYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCC----CHHHHHHHC-------CTTTCCT--TCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhccc----CHHHHHHhC-------CCccccc--CchhhhhhhhhhhhhHHHHhhh
Confidence 456799999999998887665311 111111111 1223453 7788888888888888777775
Done!