Your job contains 1 sequence.
>009689
MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP
RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI
GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA
SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVIFRG
KDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSL
PCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPF
THTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN
TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL
VLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009689
(528 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2823671 - symbol:CH1 "CHLORINA 1" species:3702... 2109 2.4e-218 1
TAIR|locus:2047329 - symbol:TIC55-II "translocon at the i... 231 3.4e-16 1
UNIPROTKB|Q4KB09 - symbol:vanA "Vanillate O-demethylase, ... 179 2.9e-11 2
UNIPROTKB|Q48IV9 - symbol:vanA "Vanillate monooxygenase, ... 168 1.4e-10 2
TAIR|locus:2131406 - symbol:ACD1-LIKE "AT4G25650" species... 137 4.2e-08 2
UNIPROTKB|Q4KAM4 - symbol:prnD "Aminopyrrolnitrin oxidase... 153 9.1e-08 2
TIGR_CMR|GSU_0845 - symbol:GSU_0845 "Rieske 2Fe-2S family... 120 1.5e-06 1
UNIPROTKB|D5IGG0 - symbol:carAa "Carbazole 1,9a-dioxygena... 140 2.0e-06 1
ZFIN|ZDB-GENE-040718-356 - symbol:zgc:92275 "zgc:92275" s... 139 3.7e-06 1
TAIR|locus:2082122 - symbol:ACD1 "ACCELERATED CELL DEATH ... 136 1.0e-05 1
UNIPROTKB|F1NKZ9 - symbol:LOC427775 "Uncharacterized prot... 134 1.1e-05 1
TIGR_CMR|SPO_3678 - symbol:SPO_3678 "Rieske 2Fe-2S domain... 133 1.1e-05 1
WB|WBGene00007536 - symbol:daf-36 species:6239 "Caenorhab... 132 1.9e-05 1
FB|FBgn0259697 - symbol:nvd "neverland" species:7227 "Dro... 131 2.5e-05 1
UNIPROTKB|Q8G8B6 - symbol:carAa "Carbazole 1,9a-dioxygena... 129 3.4e-05 1
TIGR_CMR|SPO_3681 - symbol:SPO_3681 "Rieske 2Fe-2S domain... 121 0.00025 1
>TAIR|locus:2823671 [details] [associations]
symbol:CH1 "CHLORINA 1" species:3702 "Arabidopsis
thaliana" [GO:0005506 "iron ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;ISS;IDA] [GO:0010277 "chlorophyllide a
oxygenase [overall] activity" evidence=IEA;IDA;IMP] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016705 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0015995 "chlorophyll biosynthetic
process" evidence=RCA;IMP] [GO:0009706 "chloroplast inner membrane"
evidence=IDA] [GO:0042651 "thylakoid membrane" evidence=IDA]
[GO:0009073 "aromatic amino acid family biosynthetic process"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR013626 InterPro:IPR015881 InterPro:IPR017941
Pfam:PF00355 Pfam:PF08417 PROSITE:PS51296 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005506 GO:GO:0009706 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0009535 GO:GO:0042651
GO:GO:0016705 EMBL:AB021316 EMBL:AF177200 EMBL:AB030565
EMBL:AC084807 EMBL:AY128357 EMBL:BT002075 IPI:IPI00519476
IPI:IPI00521014 IPI:IPI00532566 PIR:T52458 RefSeq:NP_175088.1
RefSeq:NP_973969.1 RefSeq:NP_973970.1 UniGene:At.19047
ProteinModelPortal:Q9MBA1 SMR:Q9MBA1 STRING:Q9MBA1 PaxDb:Q9MBA1
PRIDE:Q9MBA1 EnsemblPlants:AT1G44446.1 GeneID:841029
KEGG:ath:AT1G44446 TAIR:At1g44446 eggNOG:COG4638
HOGENOM:HOG000012389 InParanoid:Q9MBA1 KO:K13600 OMA:QCATHLH
PhylomeDB:Q9MBA1 ProtClustDB:PLN02281 BioCyc:ARA:AT1G44446-MONOMER
BioCyc:MetaCyc:AT1G44446-MONOMER BRENDA:1.13.12.14
Genevestigator:Q9MBA1 GermOnline:AT1G44446 GO:GO:0010277
GO:GO:0015995 Uniprot:Q9MBA1
Length = 536
Score = 2109 (747.5 bits), Expect = 2.4e-218, P = 2.4e-218
Identities = 392/531 (73%), Positives = 451/531 (84%)
Query: 3 AIATAAALSLPISLY--RPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
A+ + +ALSLPIS R + ++ KK V+G FRVFA+FG+E GLV+KKS W LFDVEDP
Sbjct: 4 AVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVEDP 63
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK P KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLNPLAR+YKSI
Sbjct: 64 RSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKSI 123
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL R + D+ +
Sbjct: 124 GTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDKPSS 183
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-------E 233
S + S LD K KSLNVSGPV PY+ LKNFW+PVAF+ DLK DTM +
Sbjct: 184 STTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFEQ 243
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 244 PWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKLL 303
Query: 294 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGXXXXXXX 353
VKIKSLPC EQEGMIWIWPGDEPP +P L PPSGF IHAE+VM+LP+EHG
Sbjct: 304 KVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNLL 363
Query: 354 XXAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
AHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISKP
Sbjct: 364 DLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISKP 423
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
GKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSLDFA +LK++PFM++LWRHFAEQV
Sbjct: 424 GKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQV 483
Query: 474 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
LNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRLWR+A+++G +LPF
Sbjct: 484 LNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534
>TAIR|locus:2047329 [details] [associations]
symbol:TIC55-II "translocon at the inner envelope
membrane of chloroplasts 55-II" species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0010277
"chlorophyllide a oxygenase [overall] activity" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0045036 "protein targeting
to chloroplast" evidence=IMP] InterPro:IPR013626 InterPro:IPR017941
Pfam:PF00355 Pfam:PF08417 PROSITE:PS51296 GO:GO:0016021
EMBL:CP002685 GO:GO:0046872 GO:GO:0009941 GO:GO:0009706
GO:GO:0051537 EMBL:AC006585 Gene3D:2.102.10.10 SUPFAM:SSF50022
UniGene:At.22189 UniGene:At.69630 eggNOG:COG4638 GO:GO:0010277
GO:GO:0045036 EMBL:AK221423 IPI:IPI00540398 PIR:H84640
RefSeq:NP_180055.1 ProteinModelPortal:Q9SK50 SMR:Q9SK50
STRING:Q9SK50 PRIDE:Q9SK50 EnsemblPlants:AT2G24820.1 GeneID:817019
KEGG:ath:AT2G24820 TAIR:At2g24820 HOGENOM:HOG000239564
InParanoid:Q9SK50 OMA:KCVKIPQ PhylomeDB:Q9SK50
ProtClustDB:CLSN2683134 Genevestigator:Q9SK50 Uniprot:Q9SK50
Length = 539
Score = 231 (86.4 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 81/327 (24%), Positives = 136/327 (41%)
Query: 218 WFPVAFSTDLKDD-----TM--EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P+ + ++ +D T+ V+++ +G C ++ C HR L G + +GR++
Sbjct: 88 WYPLYLTKNVPEDAPLGLTVYDRQIVLYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLE 147
Query: 271 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF------EQEGMIWIWPGDE-PPTAT-I 322
C YHGW++ +GKC K+P + KI C + +G++W+W + PP +
Sbjct: 148 CLYHGWQFEGEGKCVKIPQLPA-SAKIPKAACVKTYEVKDSQGVVWVWMSTKTPPNPEKL 206
Query: 323 PCL---LPPSGFEIHAEIVMELPIEHGXXXXXXXXXAHAPFTHTST-F-AKGWSVPSLVK 377
P P F+I ELP +H AH P +H T F AK LV
Sbjct: 207 PWFENFARPGFFDIST--THELPYDHSILLENLMDPAHVPISHDRTDFTAKREDAQPLVF 264
Query: 378 FLTPAS--GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCL 435
+T S G G W + + + + EG++ + + L +C
Sbjct: 265 EVTERSNRGFAGTWGREKEGGKGSNLLRFDAPCVLQNNREFEGKDGVK--NYFSGLFLCR 322
Query: 436 PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE-RMNNGANV 494
P+ + K+ L+ R + S L V Q+ W A +V +D+ + Q E M
Sbjct: 323 PTGQGKSMLIVRFGVTKRSPLVSV-LPQWFWHQNACKVFEQDMGFLSSQNEVLMKEKVPT 381
Query: 495 WNLPVGY---DKLGVRYRLWRDALEKG 518
+L + D YR W D + G
Sbjct: 382 KDLYLNLKSSDTWVAEYRKWMDKVGHG 408
>UNIPROTKB|Q4KB09 [details] [associations]
symbol:vanA "Vanillate O-demethylase, oxygenase subunit"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006725 "cellular
aromatic compound metabolic process" evidence=ISS] [GO:0018489
"vanillate monooxygenase activity" evidence=ISS] InterPro:IPR015881
InterPro:IPR017941 Pfam:PF00355 PROSITE:PS00570 PROSITE:PS51296
GO:GO:0005506 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0008168 GO:GO:0006725
eggNOG:COG4638 HOGENOM:HOG000218715 KO:K03862 OMA:YGFIWVW
ProtClustDB:CLSK868980 GO:GO:0018489 RefSeq:YP_260574.1
ProteinModelPortal:Q4KB09 STRING:Q4KB09 GeneID:3475505
KEGG:pfl:PFL_3471 PATRIC:19876285
BioCyc:PFLU220664:GIX8-3486-MONOMER Uniprot:Q4KB09
Length = 352
Score = 179 (68.1 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 37/109 (33%), Positives = 53/109 (48%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L+ + E V +R +G V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDELQGKPLGRQICGEHMVFYRAHEGRVTAVEDFCPHRGAPLSLGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE 316
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+
Sbjct: 64 LVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ 112
Score = 44 (20.5 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 22/103 (21%), Positives = 38/103 (36%)
Query: 390 DPYPIDM----EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLL 445
D P+D F PP VL +G++ G Q + P S
Sbjct: 210 DDVPVDRWQICRFSPPSHVLIEVGVAHAGHGGYDAPAQYKASSIVVDFITPESDTSIWYF 269
Query: 446 YRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM 488
+ M+ +F P + R ++ +EDL ++ QQ+ +
Sbjct: 270 WGMARNFNP---QDPALTESIREGQGKIFSEDLEMLERQQQNL 309
>UNIPROTKB|Q48IV9 [details] [associations]
symbol:vanA "Vanillate monooxygenase, oxygenase subunit"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0018489 "vanillate monooxygenase activity" evidence=ISS]
[GO:0042190 "vanillin catabolic process" evidence=ISS]
InterPro:IPR015881 InterPro:IPR017941 Pfam:PF00355 PROSITE:PS00570
PROSITE:PS51296 GO:GO:0005506 GO:GO:0051537 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:2.102.10.10 SUPFAM:SSF50022
eggNOG:COG4638 RefSeq:YP_274672.1 ProteinModelPortal:Q48IV9
STRING:Q48IV9 GeneID:3557872 KEGG:psp:PSPPH_2475 PATRIC:19974231
HOGENOM:HOG000218715 KO:K03862 OMA:YGFIWVW ProtClustDB:CLSK868980
GO:GO:0018489 GO:GO:0042190 Uniprot:Q48IV9
Length = 354
Score = 168 (64.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 35/108 (32%), Positives = 53/108 (49%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ +++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNERMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGD 315
+ C YHG DGK MP ++R K+ E+ G IW+WPGD
Sbjct: 64 LVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGD 111
Score = 50 (22.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 33/145 (22%), Positives = 57/145 (39%)
Query: 390 DPYPIDM----EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLL 445
D P+D F PP VL +G++ GK + + P +
Sbjct: 210 DDVPVDRWQICRFTPPSHVLIEVGVAHAGKGGYHALHEFKASSIVVDFITPETDTSIWYF 269
Query: 446 YRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLG 505
+ M+ +F + + R ++ +EDL ++ QQ+ + L + D G
Sbjct: 270 WGMARNFNPADEQ---LTATIREGQRKIFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGG 326
Query: 506 VRYR--LWR-DALEKG--AKQLPFM 525
V+ R L R A E+ A+Q+P M
Sbjct: 327 VQSRKILERLIAAERASTAEQIPVM 351
>TAIR|locus:2131406 [details] [associations]
symbol:ACD1-LIKE "AT4G25650" species:3702 "Arabidopsis
thaliana" [GO:0009055 "electron carrier activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0010277
"chlorophyllide a oxygenase [overall] activity" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR013626 InterPro:IPR017941 Pfam:PF00355
Pfam:PF08417 PROSITE:PS51296 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0015031 GO:GO:0009941
EMBL:AL161563 GO:GO:0009706 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 EMBL:AL050400 eggNOG:COG4638 GO:GO:0010277
HOGENOM:HOG000239731 EMBL:AY344062 EMBL:AF424575 EMBL:AY056168
EMBL:AY062731 EMBL:BT002586 IPI:IPI00516579 PIR:T09557
RefSeq:NP_567725.1 RefSeq:NP_849444.1 UniGene:At.3350
ProteinModelPortal:Q8W496 STRING:Q8W496 PaxDb:Q8W496 PRIDE:Q8W496
EnsemblPlants:AT4G25650.2 GeneID:828670 KEGG:ath:AT4G25650
GeneFarm:3092 TAIR:At4g25650 InParanoid:Q8W496 OMA:VYPSTVQ
PhylomeDB:Q8W496 ProtClustDB:CLSN2689607 Genevestigator:Q8W496
Uniprot:Q8W496
Length = 559
Score = 137 (53.3 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 33/131 (25%), Positives = 55/131 (41%)
Query: 248 VQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIK 298
+ +TC HR PL G +++ GR+QC YHGW ++ G C+ +P + +
Sbjct: 123 MDDTCPHRLAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVA 182
Query: 299 SLPCFEQEGMIWIWPGDEPPTATI-----PCLLPPSGFEIHAEIV--MELPIEHGXXXXX 351
P Q +IW WP +P I P +P +++ ++P +
Sbjct: 183 VYPSTVQHEIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVEN 242
Query: 352 XXXXAHAPFTH 362
AH P+ H
Sbjct: 243 LMDPAHVPYAH 253
Score = 67 (28.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 428 LHQLHVCLPSSRKKTRLLYRMSLDFASVL-KHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 486
L + +C+P S ++RL++ +F + K VP ++++ +L+ DL L+ ++
Sbjct: 356 LSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVP--RWVFHIGQNTILDSDLHLLHVEER 413
Query: 487 R-MNNGANVWN----LPVGYDKLGVRYRLW 511
+ + G W +P D V +R W
Sbjct: 414 KILERGPENWQKACFIPTKSDANVVTFRRW 443
>UNIPROTKB|Q4KAM4 [details] [associations]
symbol:prnD "Aminopyrrolnitrin oxidase PrnD" species:220664
"Pseudomonas protegens Pf-5" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019748 "secondary metabolic process" evidence=ISS]
InterPro:IPR017941 Pfam:PF00355 PROSITE:PS51296 GO:GO:0003824
GO:GO:0046872 GO:GO:0016491 EMBL:CP000076 GenomeReviews:CP000076_GR
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0019748
eggNOG:COG4638 RefSeq:YP_260709.1 ProteinModelPortal:Q4KAM4
STRING:Q4KAM4 GeneID:3475640 KEGG:pfl:PFL_3607 PATRIC:19876573
HOGENOM:HOG000250326 OMA:AFETTTA ProtClustDB:CLSK715065
BioCyc:MetaCyc:MONOMER-16709 BioCyc:PFLU220664:GIX8-3622-MONOMER
Uniprot:Q4KAM4
Length = 363
Score = 153 (58.9 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 38/127 (29%), Positives = 55/127 (43%)
Query: 212 TRLKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
TR+ W+ S L+D E P+V +R G + C+H L G +
Sbjct: 23 TRVAASWYVAMRSNGLRDKPKELTLFGRPYVAWRAATGQAVVMDRHCSHLGANLADGRIK 82
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPS-----TQL----RNVKIKSLPCFEQEGMIWIWPGDE 316
+G IQCP+H W Y GKC +P QL R + +L E+ G +W+W G
Sbjct: 83 DGCIQCPFHHWRYDEQGKCVHIPGHSEVVRQLEPVPRAARQPTLVTTERYGYVWVWYGSP 142
Query: 317 PPTATIP 323
P +P
Sbjct: 143 QPLHPLP 149
Score = 40 (19.1 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 480 LVLGQQERMNNGANV--WN--LPVG------YDKLGVRYR-LWRDALEKGAKQ 521
++ G Q R G +V WN P G YDKL ++YR +R +++ A +
Sbjct: 310 VLFGLQTRQAAGYDVKIWNGMKPDGGGAYSKYDKLVLKYRAFYRGWVDRVASE 362
>TIGR_CMR|GSU_0845 [details] [associations]
symbol:GSU_0845 "Rieske 2Fe-2S family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR017941 Pfam:PF00355
PROSITE:PS51296 GO:GO:0046872 GO:GO:0016491 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 HOGENOM:HOG000128541 ProtClustDB:CLSK828052
RefSeq:NP_951902.1 ProteinModelPortal:Q74EW4 GeneID:2687147
KEGG:gsu:GSU0845 PATRIC:22024449 OMA:ACENYCP
BioCyc:GSUL243231:GH27-846-MONOMER Uniprot:Q74EW4
Length = 103
Score = 120 (47.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 23/67 (34%), Positives = 33/67 (49%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYS-TDGKCEKMPSTQ 291
E V+ K I C +N C H+ P+ G V +G I CP HGW Y +G C P
Sbjct: 23 EEVVLINDKGTITAC-ENYCPHQGSPMLAGVVKDGAISCPRHGWHYDLANGACTDHPGYT 81
Query: 292 LRNVKIK 298
L+ +++
Sbjct: 82 LKTYRVE 88
>UNIPROTKB|D5IGG0 [details] [associations]
symbol:carAa "Carbazole 1,9a-dioxygenase, terminal
oxygenase component CarAa" species:28214 "Sphingomonas sp."
[GO:0018564 "carbazole 1,9a-dioxygenase activity" evidence=ISS]
[GO:0046232 "carbazole catabolic process" evidence=IDA] [GO:0051537
"2 iron, 2 sulfur cluster binding" evidence=ISS] InterPro:IPR017941
Pfam:PF00355 PROSITE:PS51296 GO:GO:0046872 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0018564 GO:GO:0046232
InterPro:IPR021028 Pfam:PF11723 EMBL:GU123624
BioCyc:MetaCyc:MONOMER-15737 Uniprot:D5IGG0
Length = 378
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 42/140 (30%), Positives = 70/140 (50%)
Query: 208 QPY-NTRL--KNFWFPVAFSTDLKDDTMEPWVIFRGK---DGIPG---CVQNTCAHRACP 258
+PY +L +N W+PV ++++ + T P + K + + G +Q+ C HR
Sbjct: 16 EPYIRAKLGFRNHWYPVRLASEIAEGTPVPVKLLGEKILLNRVGGKVYAIQDRCLHRGVT 75
Query: 259 L--HLGSVNEGRIQCPYHGWEYS-TDGKCEKM---P-STQLRNVKIKSLPCFEQEGMIWI 311
L + ++ I C YHGW Y DG+ + P S Q+ +K+ P E +G+I++
Sbjct: 76 LSDRVECYSKNTISCWYHGWTYRWDDGRLVDILTNPGSVQIGRRALKTFPVEEAKGLIFV 135
Query: 312 WPGDEPPTATIPCLLPPSGF 331
+ GD PT I + PP GF
Sbjct: 136 YVGDGEPTPLIEDV-PP-GF 153
>ZFIN|ZDB-GENE-040718-356 [details] [associations]
symbol:zgc:92275 "zgc:92275" species:7955 "Danio
rerio" [GO:0055114 "oxidation-reduction process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] InterPro:IPR017941 Pfam:PF00355 PROSITE:PS51296
ZFIN:ZDB-GENE-040718-356 GO:GO:0046872 GO:GO:0016491 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 eggNOG:COG4638
GeneTree:ENSGT00390000016856 HOGENOM:HOG000018897 OMA:VWFHCDG
EMBL:BX005379 EMBL:BC075979 EMBL:AB607951 IPI:IPI00482212
RefSeq:NP_001002612.1 UniGene:Dr.31637 Ensembl:ENSDART00000049036
GeneID:436885 KEGG:dre:436885 HOVERGEN:HBG061330 InParanoid:Q6DHJ3
OrthoDB:EOG4V437V NextBio:20831313 Uniprot:Q6DHJ3
Length = 460
Score = 139 (54.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 31/93 (33%), Positives = 48/93 (51%)
Query: 226 DLKDDTM--EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEGRIQCPYHGWEY-STD 281
D+K T+ + +FRG+DG V C H L +G V G I+CP+HGW++ D
Sbjct: 136 DVKSVTVLGQQVAVFRGQDGKAYVVDAYCPHLGANLAVGGRVVGGCIECPFHGWQFRGVD 195
Query: 282 GKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIW 312
G+C K+P K++ P E G++ +W
Sbjct: 196 GRCVKIPYADKVPEFAKVRCWPSCEINGLVLVW 228
>TAIR|locus:2082122 [details] [associations]
symbol:ACD1 "ACCELERATED CELL DEATH 1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0010277 "chlorophyllide a oxygenase [overall] activity"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009706
"chloroplast inner membrane" evidence=TAS] [GO:0032441
"pheophorbide a oxygenase activity" evidence=IDA] [GO:0051536
"iron-sulfur cluster binding" evidence=ISS] [GO:0009908 "flower
development" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0015996 "chlorophyll catabolic process"
evidence=IMP] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
[GO:0008219 "cell death" evidence=IMP] [GO:0009816 "defense
response to bacterium, incompatible interaction" evidence=IMP]
InterPro:IPR013626 InterPro:IPR017941 Pfam:PF00355 Pfam:PF08417
PROSITE:PS51296 UniPathway:UPA00674 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008219 GO:GO:0022900
GO:GO:0051536 GO:GO:0009706 GO:GO:0051537 GO:GO:0009908
GO:GO:0010154 GO:GO:0009816 Gene3D:2.102.10.10 SUPFAM:SSF50022
GO:GO:0009534 eggNOG:COG4638 GO:GO:0010277 EMBL:AL391254
GO:GO:0015996 EMBL:U77347 EMBL:AY344061 EMBL:AY093092
IPI:IPI00530021 PIR:T51785 RefSeq:NP_190074.1 UniGene:At.21728
UniGene:At.36095 ProteinModelPortal:Q9FYC2 SMR:Q9FYC2 STRING:Q9FYC2
PaxDb:Q9FYC2 PRIDE:Q9FYC2 EnsemblPlants:AT3G44880.1 GeneID:823622
KEGG:ath:AT3G44880 TAIR:At3g44880 HOGENOM:HOG000239731
InParanoid:Q9FYC2 KO:K13071 OMA:VVYATPI PhylomeDB:Q9FYC2
ProtClustDB:PLN02518 BioCyc:ARA:AT3G44880-MONOMER
BioCyc:MetaCyc:AT3G44880-MONOMER BRENDA:1.14.12.20
Genevestigator:Q9FYC2 GermOnline:AT3G44880 GO:GO:0032441
GO:GO:0016630 Uniprot:Q9FYC2
Length = 537
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 37/123 (30%), Positives = 59/123 (47%)
Query: 215 KNFWFPVAFSTDLKDDTMEPWVIFRGKDGIPGCVQNT---------CAHRACPLHLGSVN 265
++ W+PV+ DL + P+ + G+D + +N C HR PL G ++
Sbjct: 85 RDHWYPVSLVEDLDPNVPTPFQLL-GRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRLD 143
Query: 266 E-GRIQCPYHGWEYSTDGKCEKMPST-----QLRNVK------IKSLPCFEQEGMIWIWP 313
E G +QC YHGW + G C ++P + R VK IK P +G++++WP
Sbjct: 144 ENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPRACAIK-FPTMVSQGLLFVWP 202
Query: 314 GDE 316
DE
Sbjct: 203 -DE 204
>UNIPROTKB|F1NKZ9 [details] [associations]
symbol:LOC427775 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051537 "2 iron,
2 sulfur cluster binding" evidence=IEA] InterPro:IPR017941
Pfam:PF00355 PROSITE:PS51296 GO:GO:0046872 GO:GO:0016491
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022
GeneTree:ENSGT00390000016856 OMA:VWFHCDG EMBL:AADN02026957
IPI:IPI00604040 Ensembl:ENSGALT00000014454 Uniprot:F1NKZ9
Length = 409
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/131 (30%), Positives = 57/131 (43%)
Query: 193 KGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIP 245
+G R+S PY N W+ V S L + E FR +DG
Sbjct: 51 RGLSARRSRRPGALPPPY----PNGWYRVLDSAQLPRGAVRSLALLGERLAAFRTQDGQA 106
Query: 246 GCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEY-STDGKCEKMP-STQLRN-VKIKSLP 301
V C H L G G I+CP+HGW + DGKC +P + ++ + K++S P
Sbjct: 107 HVVDAYCPHLGADLAAGGRVVGSCIECPFHGWRFRGEDGKCTHIPYAGKVPDFAKVRSWP 166
Query: 302 CFEQEGMIWIW 312
C E GM+ +W
Sbjct: 167 CCEVNGMLLLW 177
>TIGR_CMR|SPO_3678 [details] [associations]
symbol:SPO_3678 "Rieske 2Fe-2S domain protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR015881 InterPro:IPR017941
Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090 PROSITE:PS00570
PROSITE:PS51296 GO:GO:0005506 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0019439 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0016708 RefSeq:YP_168873.1
ProteinModelPortal:Q5LM85 GeneID:3196039 KEGG:sil:SPO3678
PATRIC:23380843 OMA:PRMENAG Uniprot:Q5LM85
Length = 369
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/113 (33%), Positives = 48/113 (42%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
EP ++ RG D + N C HR PL G N R C YH W Y DG + P ++
Sbjct: 68 EPLLVVRGDDQSVRVMANVCRHRGMPLAEGRGNTKRFVCSYHAWAYGRDGALLRAP--RM 125
Query: 293 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-VMELPIE 344
N + C E + +W G T P LP FE H E+ M P E
Sbjct: 126 ENAGFDAKSCKLPEHAVQLWNGFIYVNLT-PDALP---FE-HPELDAMLAPYE 173
>WB|WBGene00007536 [details] [associations]
symbol:daf-36 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017941 Pfam:PF00355 PROSITE:PS51296 GO:GO:0005737
GO:GO:0046872 GO:GO:0016491 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 EMBL:Z73969 eggNOG:COG4638 PIR:T19219
RefSeq:NP_505629.2 ProteinModelPortal:Q17938 SMR:Q17938
STRING:Q17938 PaxDb:Q17938 EnsemblMetazoa:C12D8.5 GeneID:179422
KEGG:cel:CELE_C12D8.5 UCSC:C12D8.5 CTD:179422 WormBase:C12D8.5
GeneTree:ENSGT00390000016856 HOGENOM:HOG000018897 InParanoid:Q17938
OMA:VWFHCDG UniPathway:UPA01020 NextBio:905318 Uniprot:Q17938
Length = 428
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 51/195 (26%), Positives = 77/195 (39%)
Query: 216 NFWFPVAFSTDLKDDT-MEPWVI------FRGKDGIPGCVQNTCAHRACPLHLGS--VNE 266
N W+ V S L ++ ME V+ R + G + C H ++G V +
Sbjct: 79 NGWYCVCESEKLANNQIMEITVLGQFLSLIRSESGAVYITDSYCPHIGANFNIGGRVVRD 138
Query: 267 GRIQCPYHGWEYSTD-GKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIW---PGDEPPT 319
IQCP+HGW +S + GKC ++P + R K+ + PC E+ I++W G EP
Sbjct: 139 NCIQCPFHGWIFSAETGKCVEVPYDEGRIPEQAKVTTWPCIERNNNIYLWYHCDGAEPEW 198
Query: 320 ATIPCLLP-PSGF-EIHAEIVMELPIEHGXXXXXXXXXAHAPFTHTST--FAKGWSVPSL 375
IP + GF + E+ AH + H S KG +
Sbjct: 199 E-IPEITEITDGFWHLGGRTEHEVMCHIQEIPENGADIAHLNYLHKSAPPVTKGSDIIK- 256
Query: 376 VKFLTPASGLQGYWD 390
P +Q WD
Sbjct: 257 TDLSDPQPAVQHVWD 271
>FB|FBgn0259697 [details] [associations]
symbol:nvd "neverland" species:7227 "Drosophila melanogaster"
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0007552 "metamorphosis"
evidence=IMP] [GO:0035264 "multicellular organism growth"
evidence=IMP] [GO:0002168 "instar larval development" evidence=IMP]
[GO:0045456 "ecdysteroid biosynthetic process" evidence=IMP]
InterPro:IPR017941 Pfam:PF00355 PROSITE:PS51296 EMBL:AE014296
GO:GO:0046872 GO:GO:0016491 GO:GO:0007552 GO:GO:0035264
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0002168
eggNOG:COG4638 GO:GO:0045456 GeneTree:ENSGT00390000016856
EMBL:AB232987 RefSeq:NP_001097670.1 UniGene:Dm.27610 SMR:Q1JUZ1
EnsemblMetazoa:FBtr0113473 GeneID:5740633 KEGG:dme:Dmel_CG40050
UCSC:CG40050-RA CTD:5740633 FlyBase:FBgn0259697 KO:K14938
OMA:CESERLA OrthoDB:EOG4J9KFJ GenomeRNAi:5740633 NextBio:20891671
Uniprot:Q1JUZ1
Length = 429
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 60/224 (26%), Positives = 93/224 (41%)
Query: 216 NFWFPVAFSTDLK--DDTM-----EPWVIFRGKDGIPGCVQNTCAHRACPLHLG-SVNEG 267
N W+ + S+ LK + T E VIFR K I + C H L +G SV +
Sbjct: 95 NGWYGILKSSQLKAGEATCVSCLGEDLVIFRSKKDIVFILDAYCPHLGANLGIGGSVADD 154
Query: 268 RIQCPYHGWEY-STDGKCEKMP-STQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
+ CP+H W++ TDG C +P ST + + K+K E +G I+IW E +P
Sbjct: 155 CVICPFHQWKFRGTDGLCINIPYSTSVPKGSKLKKWISQEVDGFIFIWYHAEQ--TELPW 212
Query: 325 LLP-PSG-------FEIHAEIVMELPIEHGXXXXXXXXXAHAPFTHTSTFAKG-WSVPSL 375
LP P G + H E + I+ AH H F G W+
Sbjct: 213 DLPVPMGEIDDTFVYHGHNEFYINCHIQE--IPENGADIAHFNAIHKKNFINGSWAQKKR 270
Query: 376 VKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 419
+ F + + W P+ +++ L+ + +S KL G+
Sbjct: 271 L-FGLGSHHWKARWSPFTGKLKY------LAEVNLSHTFKLFGK 307
>UNIPROTKB|Q8G8B6 [details] [associations]
symbol:carAa "Carbazole 1,9a-dioxygenase, terminal
oxygenase component CarAa" species:53412 "Pseudomonas resinovorans"
[GO:0018564 "carbazole 1,9a-dioxygenase activity" evidence=IDA]
[GO:0046232 "carbazole catabolic process" evidence=IDA] [GO:0051537
"2 iron, 2 sulfur cluster binding" evidence=IDA] InterPro:IPR017941
Pfam:PF00355 PROSITE:PS51296 GO:GO:0046872 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 EMBL:AB047548 EMBL:AB088420
RefSeq:NP_758566.1 RefSeq:NP_758567.1 ProteinModelPortal:Q8G8B6
SMR:Q8G8B6 GeneID:1047040 ProtClustDB:CLSK641757 GO:GO:0018564
GO:GO:0046232 InterPro:IPR021028 Pfam:PF11723 Uniprot:Q8G8B6
Length = 384
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 46/149 (30%), Positives = 72/149 (48%)
Query: 209 PY-NTRL--KNFWFPVAFSTDLKDDTMEPWVI-FRGK-------DGIPGCVQNTCAHRAC 257
PY + +L +N W+PV FS ++ D EP + G+ DG C+++ C HR
Sbjct: 17 PYVDAKLGFRNHWYPVMFSKEI--DEGEPKTLKLLGENLLVNRIDGKLYCLKDRCLHRGV 74
Query: 258 PLHLG--SVNEGRIQCPYHGWEYS-TDGK-CEKM--P-STQLRNVKIKSLPCFEQEGMIW 310
L + + I C YH W Y DG C+ + P S Q+ K+K+ P E +G ++
Sbjct: 75 QLSVKVECKTKSTITCWYHAWTYRWEDGVLCDILTNPTSAQIGRQKLKTYPVQEAKGCVF 134
Query: 311 IWPGD-EPPTATIPCLLPPSGFEIHAEIV 338
I+ GD +PP PP+ + EI+
Sbjct: 135 IYLGDGDPPPLARDT--PPNFLDDDMEIL 161
>TIGR_CMR|SPO_3681 [details] [associations]
symbol:SPO_3681 "Rieske 2Fe-2S domain protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR017941 Pfam:PF00355 Pfam:PF00848
PRINTS:PR00090 PROSITE:PS51296 GO:GO:0005506 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0019439 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0016708 OMA:NVCLHRM
RefSeq:YP_168876.1 ProteinModelPortal:Q5LM82 GeneID:3194623
KEGG:sil:SPO3681 PATRIC:23380849 HOGENOM:HOG000145130
ProtClustDB:CLSK767406 Uniprot:Q5LM82
Length = 380
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 289
+P V+ R +DG + N C HR L G N I CPYH W Y+ DGK P+
Sbjct: 72 QPIVVLRDRDGDLRAMSNVCLHRMSTLLHGRGNAKTIVCPYHAWTYNLDGKLRGAPA 128
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.429 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 528 519 0.00089 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 627 (67 KB)
Total size of DFA: 339 KB (2170 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.62u 0.08s 43.70t Elapsed: 00:00:37
Total cpu time: 43.62u 0.08s 43.70t Elapsed: 00:00:38
Start: Fri May 10 21:01:23 2013 End: Fri May 10 21:02:01 2013