BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009689
(528 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255545394|ref|XP_002513757.1| chlorophyll synthase, putative [Ricinus communis]
gi|223546843|gb|EEF48340.1| chlorophyll synthase, putative [Ricinus communis]
Length = 535
Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/534 (84%), Positives = 490/534 (91%), Gaps = 7/534 (1%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
M +ATAAALSLPISL R +K N+KK VRGGF VFA+FGEEGG++DKKS WSTLFDVEDP
Sbjct: 1 MNTVATAAALSLPISLCRSSKHNSKKGVRGGFGVFAVFGEEGGVLDKKSVWSTLFDVEDP 60
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK+PQ KGKFLDVNQALEVAR+DIQYCDWRARQDVLTIMLLHEKVV+VLNPLARDYKSI
Sbjct: 61 RSKMPQLKGKFLDVNQALEVARFDIQYCDWRARQDVLTIMLLHEKVVDVLNPLARDYKSI 120
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GT+KKELA LQE LAQAH+QVH+SEARV+TALDKLAYMEALVNDRLL DR T+ T T
Sbjct: 121 GTVKKELAGLQEALAQAHQQVHLSEARVSTALDKLAYMEALVNDRLLPDRSTTETSHTSP 180
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-------E 233
S ST+ QSLD V+ + PRKSLNVSGPVQPY++ LKNFW+PVAFSTDLKDDTM E
Sbjct: 181 STSTAPQSLDTVQRRSPRKSLNVSGPVQPYHSHLKNFWYPVAFSTDLKDDTMIPIDCFEE 240
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
PWVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEY+TDGKCEKMPST+L
Sbjct: 241 PWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRLL 300
Query: 294 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 353
NVKIKSLPCFEQEGMIW+WPG +PP AT+P L PP+GF +HAEIVMELP+EHGLLLDNLL
Sbjct: 301 NVKIKSLPCFEQEGMIWVWPGSDPPAATLPSLQPPAGFHVHAEIVMELPVEHGLLLDNLL 360
Query: 354 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
DLAHAPFTHTSTFAKGW+VPSLV FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP
Sbjct: 361 DLAHAPFTHTSTFAKGWTVPSLVTFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
GKLEG++TRQCATHLHQLHVCLPSSR+KTRLLYRMSLDFA +LKH+PFM+YLWRHFAEQV
Sbjct: 421 GKLEGKSTRQCATHLHQLHVCLPSSRQKTRLLYRMSLDFAPLLKHIPFMEYLWRHFAEQV 480
Query: 474 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKP 527
LNEDLRLV+GQQERM NGANVWNLPV YDKLGVRYRLWRDA+E+GAKQ PF KP
Sbjct: 481 LNEDLRLVVGQQERMINGANVWNLPVTYDKLGVRYRLWRDAVERGAKQNPFSKP 534
>gi|224082298|ref|XP_002306638.1| predicted protein [Populus trichocarpa]
gi|222856087|gb|EEE93634.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/531 (84%), Positives = 483/531 (90%), Gaps = 7/531 (1%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
MTA ATAAALS+PISL R +K+N KK VRGGFRVFA+ GEEGGL+DKKS W LFDVEDP
Sbjct: 1 MTAFATAAALSVPISLCRSSKLNCKKGVRGGFRVFAVLGEEGGLLDKKSTWGPLFDVEDP 60
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK+PQ KGKFLD QALEVARYDIQYCDWRARQD+LTIM+LHEKVVEVLNPLARDYKSI
Sbjct: 61 RSKMPQFKGKFLDAYQALEVARYDIQYCDWRARQDLLTIMILHEKVVEVLNPLARDYKSI 120
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GTMKKELAELQ++L+QAHRQVHISEARV+TALDKLAYME LVNDRLLQDR+ + +DQ
Sbjct: 121 GTMKKELAELQDELSQAHRQVHISEARVSTALDKLAYMEELVNDRLLQDRNPAESDQASP 180
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-------E 233
SPSTS QSLD VK K PRK+L VSGPVQPY+ LKNFW+PVAFSTDLKD TM E
Sbjct: 181 SPSTSTQSLDTVKNKSPRKNLKVSGPVQPYHPHLKNFWYPVAFSTDLKDGTMIPIDCFEE 240
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
PWV+FRG DG PGCV+NTCAHRACPLHLGSVNEGR++CPYHGWEYSTDGKCEKMPST+L
Sbjct: 241 PWVLFRGMDGKPGCVRNTCAHRACPLHLGSVNEGRVRCPYHGWEYSTDGKCEKMPSTRLL 300
Query: 294 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 353
NVKIKSLPCFEQEGMI +WPG +PP AT+P L PP GF++HAEIVMELP+EHGLLLDNLL
Sbjct: 301 NVKIKSLPCFEQEGMILVWPGSDPPAATLPSLQPPPGFQVHAEIVMELPVEHGLLLDNLL 360
Query: 354 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP
Sbjct: 361 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
GKLEGQ+TR+CATHLHQLHVCLPSSR KTRLLYRMSLDFA VLKHVPFM YLWRHFAEQV
Sbjct: 421 GKLEGQSTRECATHLHQLHVCLPSSRHKTRLLYRMSLDFAPVLKHVPFMHYLWRHFAEQV 480
Query: 474 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
LNEDLRLVLGQQERM NGANVWN PV YDKLGVRYRLWRDA+EKGAKQLPF
Sbjct: 481 LNEDLRLVLGQQERMINGANVWNWPVSYDKLGVRYRLWRDAVEKGAKQLPF 531
>gi|449465447|ref|XP_004150439.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Cucumis
sativus]
gi|449513335|ref|XP_004164299.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Cucumis
sativus]
Length = 534
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/531 (81%), Positives = 482/531 (90%), Gaps = 8/531 (1%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
MT +ATAAALSLPIS + ++N KKSV+GGFRVFA+FGEEG +++KS W TLFDVEDP
Sbjct: 1 MTVVATAAALSLPISFSKSPRLNFKKSVKGGFRVFAVFGEEGA-IERKSGWETLFDVEDP 59
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
R+KVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVL IMLLHEKVVEVLNPLARDYKSI
Sbjct: 60 RTKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLAIMLLHEKVVEVLNPLARDYKSI 119
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GTMKKELA LQ++LA+AHRQVHISEARVATALDKLAYME LV+DRLLQDR+T+ D
Sbjct: 120 GTMKKELAGLQDELAEAHRQVHISEARVATALDKLAYMEELVHDRLLQDRNTAELDSPST 179
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-------E 233
P TS Q LD + P+KSLNVSGPV+PY+ RLKNFW+PVAFS+DLK+D M E
Sbjct: 180 LPGTSTQPLDSINRSSPKKSLNVSGPVEPYHPRLKNFWYPVAFSSDLKNDIMIPFDCFEE 239
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
PWV+FRGKDG PGC++NTCAHRACPLHLGSVN+GR+QCPYHGWEYSTDGKCEKMPST+L
Sbjct: 240 PWVLFRGKDGNPGCIRNTCAHRACPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLL 299
Query: 294 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 353
NVKIKSLPCFE+EGMIW+WPG++PP A +P L PP GF+IHAE+V+E+P+EHGLLLDNLL
Sbjct: 300 NVKIKSLPCFEKEGMIWVWPGNDPPAANLPSLKPPPGFQIHAELVIEIPVEHGLLLDNLL 359
Query: 354 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP
Sbjct: 360 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 419
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
GKLEGQ+TR+C+THLHQLHVCLPS+R+KTRLLYRMSLDFA VLK +PFM YLWRHFAEQV
Sbjct: 420 GKLEGQSTRECSTHLHQLHVCLPSTRQKTRLLYRMSLDFAPVLKQIPFMHYLWRHFAEQV 479
Query: 474 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
LNEDLRLV+GQQERM NGAN+WN+PV YDKLGVRYRLWR+A+E+GAKQLPF
Sbjct: 480 LNEDLRLVIGQQERMVNGANIWNMPVSYDKLGVRYRLWRNAVEEGAKQLPF 530
>gi|359492578|ref|XP_002284499.2| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Vitis
vinifera]
gi|302141810|emb|CBI19013.3| unnamed protein product [Vitis vinifera]
Length = 537
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/535 (83%), Positives = 486/535 (90%), Gaps = 9/535 (1%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
MT +ATAAALSLP+SL +KINTKK R G RVFA+FG+E G V++KS W T+FDVEDP
Sbjct: 1 MTIVATAAALSLPLSLCPTSKINTKKGERRGLRVFAVFGDESGSVERKSTWGTIFDVEDP 60
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK PQ KGKFLDVNQALEVAR+DIQYCDWRARQD+LTIMLLHEKVVEVLNPLAR+YKSI
Sbjct: 61 RSKFPQSKGKFLDVNQALEVARFDIQYCDWRARQDLLTIMLLHEKVVEVLNPLAREYKSI 120
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GT+KK+LA LQE+LAQAHRQVHISEARV TALDKLAYME LVNDRLLQDR+T+ ++QT
Sbjct: 121 GTLKKDLAGLQEELAQAHRQVHISEARVGTALDKLAYMEELVNDRLLQDRNTADSNQTST 180
Query: 181 SPSTSKQ--SLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------ 232
S S S SLD+VK KLP+KSLNVSGPVQPY+ RLKNFW+PVAFSTDLKDDTM
Sbjct: 181 STSPSTSTASLDMVKRKLPQKSLNVSGPVQPYHPRLKNFWYPVAFSTDLKDDTMIPIDCF 240
Query: 233 -EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ 291
EPWV+FRG+DG PGCV+NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST+
Sbjct: 241 EEPWVVFRGQDGKPGCVRNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTR 300
Query: 292 LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 351
L NVKIKSLPC EQEGMIWIWPG +PPTAT+P L PP GF+IHAEIVMELP+EHGLLLDN
Sbjct: 301 LLNVKIKSLPCLEQEGMIWIWPGSDPPTATLPSLQPPPGFKIHAEIVMELPVEHGLLLDN 360
Query: 352 LLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 411
LLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS
Sbjct: 361 LLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 420
Query: 412 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 471
KPGKLEGQ+T+QCATHLHQLHVCLPSSR KTRLLYRMSLDFA VL+H+PFMQYLWR+FAE
Sbjct: 421 KPGKLEGQSTKQCATHLHQLHVCLPSSRDKTRLLYRMSLDFAPVLQHIPFMQYLWRYFAE 480
Query: 472 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 526
+VLNEDLRLVLGQQ+RM GANVWN PV YDKLGVRYRLWRDA+E+GAK+LPF +
Sbjct: 481 KVLNEDLRLVLGQQDRMLMGANVWNCPVSYDKLGVRYRLWRDAVERGAKRLPFTE 535
>gi|356509409|ref|XP_003523442.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 530
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/533 (83%), Positives = 487/533 (91%), Gaps = 10/533 (1%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
M AIATAA LSLP S + +K++TKK ++G FRVFA++GEE +DKK+AWS LFDVEDP
Sbjct: 1 MNAIATAAVLSLPFSFSKSSKLDTKKGLKGRFRVFAVYGEE---IDKKNAWSALFDVEDP 57
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSKVPQ KGKFLDV QALEVARYDIQYCDWRARQD+LTIMLLHEKVVEVLNPLARDYKSI
Sbjct: 58 RSKVPQYKGKFLDVYQALEVARYDIQYCDWRARQDLLTIMLLHEKVVEVLNPLARDYKSI 117
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GTMKKELAELQE+LAQAH+QVHISEARV++ALDKLAYME LVND+LLQ+R T+ QT +
Sbjct: 118 GTMKKELAELQEELAQAHQQVHISEARVSSALDKLAYMEELVNDKLLQERSTTEVSQTSS 177
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-------E 233
SPSTS + +DI K + PRKSL++SGPVQ Y+ LKNFW+PVAFSTDLKDDTM E
Sbjct: 178 SPSTSFKPVDIEKRRSPRKSLDISGPVQSYHPHLKNFWYPVAFSTDLKDDTMIPIECFEE 237
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
PWVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEY+TDGKCEKMPST+L
Sbjct: 238 PWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRLL 297
Query: 294 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 353
NVKIKSLPCFE EGMIW+WPG++PPTAT+P LLPPSGFE+HAEIVMELPIEHGLLLDNLL
Sbjct: 298 NVKIKSLPCFETEGMIWVWPGNDPPTATLPSLLPPSGFEVHAEIVMELPIEHGLLLDNLL 357
Query: 354 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP
Sbjct: 358 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 417
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
GKLEGQ+T QCATHLHQLHVCLPSS++KTRLLYRMSLDFA VLKH+PFMQ+LWR+FAEQV
Sbjct: 418 GKLEGQSTSQCATHLHQLHVCLPSSKQKTRLLYRMSLDFAPVLKHIPFMQHLWRYFAEQV 477
Query: 474 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 526
LNEDLRLVLGQQERMNNGANVWN PV YDKLG+RYRLWR+ALE+G KQ PF K
Sbjct: 478 LNEDLRLVLGQQERMNNGANVWNFPVSYDKLGIRYRLWRNALERGNKQPPFSK 530
>gi|356515896|ref|XP_003526633.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 530
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/533 (82%), Positives = 483/533 (90%), Gaps = 10/533 (1%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
M AIATAA LSLP S + +K++TKK ++G FRVFA++GEE +DKKS WS LFDVEDP
Sbjct: 1 MNAIATAALLSLPFSFSKSSKLDTKKGLKGRFRVFAVYGEE---IDKKSTWSALFDVEDP 57
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSKVPQ KGKFLDV QALE ARYDIQYCDWRARQD+L IMLLHEKVVEVLNPLARDYKSI
Sbjct: 58 RSKVPQYKGKFLDVYQALEFARYDIQYCDWRARQDLLAIMLLHEKVVEVLNPLARDYKSI 117
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GTMKKELA LQE+LA AH+QVHISEARV+TALDKLAYME LVND+LLQ+R T+ QT +
Sbjct: 118 GTMKKELAGLQEELALAHQQVHISEARVSTALDKLAYMEELVNDKLLQERTTTEVSQTSS 177
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-------E 233
SPSTS + +D+ K + PRKSL++SGPVQ Y+T LKNFW+PVAFSTDLKDDTM E
Sbjct: 178 SPSTSFKPVDVEKRRPPRKSLDISGPVQSYHTHLKNFWYPVAFSTDLKDDTMIPIECFEE 237
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
PWVIFRGKDG PGCVQNTCAHRACPLHLGSV EGRIQCPYHGWEY+TDGKCEKMPST+L
Sbjct: 238 PWVIFRGKDGKPGCVQNTCAHRACPLHLGSVKEGRIQCPYHGWEYTTDGKCEKMPSTRLL 297
Query: 294 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 353
NVKIKSLPCFE+EGMIW+WPG++PPTAT+P LLPPSGFE+HAEIVMELPIEHGLLLDNLL
Sbjct: 298 NVKIKSLPCFEKEGMIWVWPGNDPPTATLPSLLPPSGFEVHAEIVMELPIEHGLLLDNLL 357
Query: 354 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP
Sbjct: 358 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 417
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
GKLEGQ+T QCATHLHQLHVCLPSS++KTRLLYRMSLDFA VLKH+PFMQ+LWR+FAEQV
Sbjct: 418 GKLEGQSTSQCATHLHQLHVCLPSSKQKTRLLYRMSLDFAPVLKHIPFMQHLWRYFAEQV 477
Query: 474 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 526
LNEDLRLVLGQQERMNNGANVWN PV YDKLGVRYRLWR+ALE+G KQ PF K
Sbjct: 478 LNEDLRLVLGQQERMNNGANVWNFPVSYDKLGVRYRLWRNALEQGTKQPPFSK 530
>gi|356552681|ref|XP_003544691.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 534
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/531 (82%), Positives = 478/531 (90%), Gaps = 12/531 (2%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
M AIATA+AL+LPI L R K++TK+ ++G FRVFA+FGEE +KK+AW+ LFDVEDP
Sbjct: 1 MNAIATASALTLPIFL-RAGKLDTKRDLKGRFRVFAVFGEE----EKKNAWAALFDVEDP 55
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK PQ KGK LD+ QALEVAR+DIQY DWRARQDVLTIM LHEKVVEVLNPLAR+YKSI
Sbjct: 56 RSKFPQNKGKVLDIYQALEVARHDIQYLDWRARQDVLTIMHLHEKVVEVLNPLAREYKSI 115
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GT+KKELA LQ++LAQAHRQVHISEARV TALDKLAYME LVNDRLLQDR T+ QT +
Sbjct: 116 GTLKKELAGLQDELAQAHRQVHISEARVTTALDKLAYMEELVNDRLLQDRSTAEVAQTSS 175
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-------E 233
SPSTS SL I K + PRKSLNVSGPVQ Y+ LKNFW+PVAFS DLKDDTM E
Sbjct: 176 SPSTSANSLVIEKRRQPRKSLNVSGPVQSYHPHLKNFWYPVAFSNDLKDDTMIPIECFEE 235
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
PWVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEY+TDGKCEKMPSTQ
Sbjct: 236 PWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTQQL 295
Query: 294 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 353
NVKIKS+PCFE+EGMIWIWPG++PPTAT+P LLPPSGFEIHAEIVMELPIEHGLLLDNLL
Sbjct: 296 NVKIKSVPCFEREGMIWIWPGNDPPTATLPSLLPPSGFEIHAEIVMELPIEHGLLLDNLL 355
Query: 354 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
DLAHAPFTHTSTFAKGWSVPSLV FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP
Sbjct: 356 DLAHAPFTHTSTFAKGWSVPSLVNFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 415
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
G+LEGQ+TR+C+THLHQLHVCLPSS++KTRLLYRMSLDFA +LKH+P M+YLWRHFAEQV
Sbjct: 416 GRLEGQSTRECSTHLHQLHVCLPSSKQKTRLLYRMSLDFAPLLKHIPLMKYLWRHFAEQV 475
Query: 474 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
LNEDLRLV+GQQERMNNGANVWN PV YDKLGVRYR+WRDALE+G KQLPF
Sbjct: 476 LNEDLRLVVGQQERMNNGANVWNFPVAYDKLGVRYRMWRDALERGVKQLPF 526
>gi|356549331|ref|XP_003543047.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 532
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/531 (82%), Positives = 477/531 (89%), Gaps = 12/531 (2%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
M AIATA+ALSLPI L R K++TK+ ++G FRVFA+FGEE +KK+AW LFDVEDP
Sbjct: 1 MNAIATASALSLPIFL-RAGKLDTKRDLKGRFRVFAVFGEE----EKKNAWGALFDVEDP 55
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK PQ KGK LD++QALEVAR+DIQY DWRARQDVLTIM LHEKVVEVLNPLAR+YKSI
Sbjct: 56 RSKFPQNKGKVLDISQALEVARHDIQYLDWRARQDVLTIMHLHEKVVEVLNPLAREYKSI 115
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GT+KKELAELQ++LAQAH QVHISEARV TALDKLAYME LVNDRLLQDR T+ QT +
Sbjct: 116 GTLKKELAELQDELAQAHTQVHISEARVTTALDKLAYMEELVNDRLLQDRSTTDVAQTSS 175
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-------E 233
SPSTS SL K + PRKSLNVSGPVQ Y+ LKNFW+PVAFS DLKDDTM E
Sbjct: 176 SPSTSANSLVTEKRRQPRKSLNVSGPVQSYHPHLKNFWYPVAFSNDLKDDTMIPIECFEE 235
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
PWVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEY+TDGKCEKMPST+
Sbjct: 236 PWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRQL 295
Query: 294 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 353
NVKIKS+PCFE+EGMIWIWPG++PP AT+P +LPPSGFEIHAEIVMELPIEHGLLLDNLL
Sbjct: 296 NVKIKSVPCFEKEGMIWIWPGNDPPAATLPSILPPSGFEIHAEIVMELPIEHGLLLDNLL 355
Query: 354 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
DLAHAPFTHTSTFAKGWSVPSLV FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP
Sbjct: 356 DLAHAPFTHTSTFAKGWSVPSLVNFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 415
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
GKLEGQ+TR+C+THLHQLHVCLPSS++KTRLLYRMSLDFA +LKH+P M+YLWRHFAEQV
Sbjct: 416 GKLEGQSTRECSTHLHQLHVCLPSSKQKTRLLYRMSLDFAPLLKHIPLMKYLWRHFAEQV 475
Query: 474 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
LNEDLRLV+GQQERMNNGANVWN PV YDKLGVRYR+WRDALE+GAKQLPF
Sbjct: 476 LNEDLRLVVGQQERMNNGANVWNFPVAYDKLGVRYRMWRDALERGAKQLPF 526
>gi|312282087|dbj|BAJ33909.1| unnamed protein product [Thellungiella halophila]
Length = 534
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/531 (77%), Positives = 470/531 (88%), Gaps = 11/531 (2%)
Query: 3 AIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
A+ T++ALSLPIS R +K++ KK V+G FRVFA+FGEEGGLV+KKS W LFDVEDP
Sbjct: 4 AVFTSSALSLPISFCKTRSSKLSRKKGVKGEFRVFAVFGEEGGLVEKKSQWGPLFDVEDP 63
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK P KGKFLDVNQALEVAR+DIQY DWRARQD+LTIMLLHEKVV+VLNPLAR+YKSI
Sbjct: 64 RSKTPPFKGKFLDVNQALEVARFDIQYLDWRARQDLLTIMLLHEKVVDVLNPLAREYKSI 123
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GT+KKELAELQE+L +AH+QVHISEARV+TALDKLA+ME LVNDRLL R + TD+
Sbjct: 124 GTVKKELAELQEELGKAHQQVHISEARVSTALDKLAHMEKLVNDRLLPVRVATETDK--P 181
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-------E 233
S STS Q LD K + K+LNVSGPVQPY+ +LKNFW+PVAF+ DLK DTM +
Sbjct: 182 STSTSVQDLDKEKTNVGAKTLNVSGPVQPYSQQLKNFWYPVAFTADLKHDTMVPIDCFEQ 241
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
PWVIFRG+DG PGCV+NTCAHRACPL LG+V EGRIQCPYHGWEYSTDGKC KMPST+L
Sbjct: 242 PWVIFRGEDGKPGCVRNTCAHRACPLDLGTVKEGRIQCPYHGWEYSTDGKCTKMPSTKLL 301
Query: 294 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 353
NVKIKS+PC EQ+GMIW+WPGD+PP+ T+P L PPSGF IHAE+VM+LP+EHGLLLDNLL
Sbjct: 302 NVKIKSIPCLEQDGMIWVWPGDDPPSPTLPSLQPPSGFVIHAELVMDLPVEHGLLLDNLL 361
Query: 354 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
DLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEF+PPC+VLSTIGISKP
Sbjct: 362 DLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFKPPCIVLSTIGISKP 421
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
GKLEG++T+QCATHLHQLHVCLPSSR KTRLLYRMSLDFA +LK+VPFM++LWRHFAEQV
Sbjct: 422 GKLEGKSTKQCATHLHQLHVCLPSSRNKTRLLYRMSLDFAPILKNVPFMEHLWRHFAEQV 481
Query: 474 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
LNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRLWR+A+++G +LPF
Sbjct: 482 LNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 532
>gi|297852214|ref|XP_002893988.1| hypothetical protein ARALYDRAFT_473812 [Arabidopsis lyrata subsp.
lyrata]
gi|297339830|gb|EFH70247.1| hypothetical protein ARALYDRAFT_473812 [Arabidopsis lyrata subsp.
lyrata]
Length = 536
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/532 (75%), Positives = 463/532 (87%), Gaps = 9/532 (1%)
Query: 2 TAIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
A+ +A+ALSLPIS R + ++ KK V+G FR+FA+FG+E GL++KKS W LFDVED
Sbjct: 3 AAVFSASALSLPISFSKTRSSYLSRKKGVKGEFRIFAVFGDESGLLEKKSQWRPLFDVED 62
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
PRSK P KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLNPLAR+YKS
Sbjct: 63 PRSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKS 122
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL R + D+
Sbjct: 123 IGTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVAELDKPS 182
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------- 232
S + S LD K KSLNVSGPV PY+ LKNFW+PVAF+ DLK DTM
Sbjct: 183 TSATASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFE 242
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 243 QPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKL 302
Query: 293 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 352
VKIKSLPC EQEGMIWIWPGDEPP T+PCL PPSGF IHAE+VM+LP+EHGLLLDNL
Sbjct: 303 LKVKIKSLPCLEQEGMIWIWPGDEPPAPTLPCLQPPSGFLIHAELVMDLPVEHGLLLDNL 362
Query: 353 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
LDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEF+PPC+VLSTIGISK
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFKPPCIVLSTIGISK 422
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
PGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSLDFA +LK++PFM++LWRHFAEQ
Sbjct: 423 PGKLEGKSTKQCATHLHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQ 482
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
VLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRLWR+A+++G +LPF
Sbjct: 483 VLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534
>gi|15219408|ref|NP_175088.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
gi|75264959|sp|Q9MBA1.1|CAO_ARATH RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Short=AtCAO; Flags: Precursor
gi|13876511|gb|AAK43487.1|AC084807_12 chlorophyll a oxygenase [Arabidopsis thaliana]
gi|6855279|dbj|BAA90462.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|22135956|gb|AAM91560.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|25083487|gb|AAN72086.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|110737210|dbj|BAF00553.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|332193913|gb|AEE32034.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
Length = 536
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/532 (75%), Positives = 460/532 (86%), Gaps = 9/532 (1%)
Query: 2 TAIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
A+ + +ALSLPIS R + ++ KK V+G FRVFA+FG+E GLV+KKS W LFDVED
Sbjct: 3 AAVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVED 62
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
PRSK P KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLNPLAR+YKS
Sbjct: 63 PRSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKS 122
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL R + D+
Sbjct: 123 IGTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDKPS 182
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------- 232
+S + S LD K KSLNVSGPV PY+ LKNFW+PVAF+ DLK DTM
Sbjct: 183 SSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFE 242
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 243 QPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKL 302
Query: 293 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 352
VKIKSLPC EQEGMIWIWPGDEPP +P L PPSGF IHAE+VM+LP+EHGLLLDNL
Sbjct: 303 LKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNL 362
Query: 353 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
LDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISK
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISK 422
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
PGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSLDFA +LK++PFM++LWRHFAEQ
Sbjct: 423 PGKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQ 482
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
VLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRLWR+A+++G +LPF
Sbjct: 483 VLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534
>gi|115483526|ref|NP_001065433.1| Os10g0567400 [Oryza sativa Japonica Group]
gi|75247969|sp|Q8S7E1.1|CAO_ORYSJ RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|18855011|gb|AAL79703.1|AC087599_22 putative chlorophyll synthase [Oryza sativa Japonica Group]
gi|110289596|gb|ABB48002.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113639965|dbj|BAF27270.1| Os10g0567400 [Oryza sativa Japonica Group]
gi|215694378|dbj|BAG89371.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185043|gb|EEC67470.1| hypothetical protein OsI_34701 [Oryza sativa Indica Group]
gi|222613297|gb|EEE51429.1| hypothetical protein OsJ_32509 [Oryza sativa Japonica Group]
Length = 541
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/534 (75%), Positives = 458/534 (85%), Gaps = 14/534 (2%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A+LSL P L +P+ + ++K V GG +V+A+ G++G K +AW LF V+D
Sbjct: 1 MTTVASLSLLPHLLIKPSFRCCSRKGVGRYGGIKVYAVLGDDGADYAKNNAWEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVNQALEV R+DIQYCDWRARQD+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIAKGKFLDVNQALEVVRFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT++KELAELQE+LA+AH QVH+SE RV++ALDKLA ME LVNDRLLQD +S + C
Sbjct: 121 IGTLRKELAELQEELAKAHNQVHLSETRVSSALDKLAQMETLVNDRLLQDGGSSASTAEC 180
Query: 180 AS--PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP--- 234
S PSTS S +V K PR+SLNVSGPVQPYN LKNFW+PVAFS+DLKDDTM P
Sbjct: 181 TSLAPSTSSAS-RVVNKKPPRRSLNVSGPVQPYNPSLKNFWYPVAFSSDLKDDTMVPIDC 239
Query: 235 ----WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 290
WVIFRGKDG PGCV NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST
Sbjct: 240 FEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 299
Query: 291 QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLD 350
++ NV+I+SLPCFEQEGM+WIWPG++PP +TIP LLPPSGF IHAEIVMELP+EHGLLLD
Sbjct: 300 KMLNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSLLPPSGFTIHAEIVMELPVEHGLLLD 359
Query: 351 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 410
NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEFRPPCMVLSTIGI
Sbjct: 360 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGI 419
Query: 411 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 470
SKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRMSLDFA +KHVPFM LW HFA
Sbjct: 420 SKPGKLEGKSTKQCSTHLHQLHICLPSSRNKTRLLYRMSLDFAPWIKHVPFMHILWSHFA 479
Query: 471 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
E+VLNEDLRLVLGQQERM NGANVWN PV YDKLG+RYRLWRDA+E+G +LPF
Sbjct: 480 EKVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGIRYRLWRDAIERGVDRLPF 533
>gi|5853117|gb|AAD54323.1| chlorophyll a oxygenase [Arabidopsis thaliana]
Length = 536
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/532 (75%), Positives = 459/532 (86%), Gaps = 9/532 (1%)
Query: 2 TAIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
A+ + +ALSLPIS R + ++ KK V+G FRVFA+FG+E GLV+KKS W LFDVED
Sbjct: 3 AAVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVED 62
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
PRSK P KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLN LAR+YKS
Sbjct: 63 PRSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNRLAREYKS 122
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL R + D+
Sbjct: 123 IGTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDKPS 182
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------- 232
+S + S LD K KSLNVSGPV PY+ LKNFW+PVAF+ DLK DTM
Sbjct: 183 SSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFE 242
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 243 QPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKL 302
Query: 293 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 352
VKIKSLPC EQEGMIWIWPGDEPP +P L PPSGF IHAE+VM+LP+EHGLLLDNL
Sbjct: 303 LKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNL 362
Query: 353 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
LDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISK
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISK 422
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
PGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSLDFA +LK++PFM++LWRHFAEQ
Sbjct: 423 PGKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQ 482
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
VLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRLWR+A+++G +LPF
Sbjct: 483 VLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534
>gi|110289597|gb|ABB48003.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
Length = 526
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/504 (78%), Positives = 441/504 (87%), Gaps = 10/504 (1%)
Query: 30 GGFRVFALFGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCD 89
GG +V+A+ G++G K +AW LF V+DP +VP KGKFLDVNQALEV R+DIQYCD
Sbjct: 16 GGIKVYAVLGDDGADYAKNNAWEALFHVDDPGPRVPIAKGKFLDVNQALEVVRFDIQYCD 75
Query: 90 WRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHISEARVA 149
WRARQD+LTIM+LH KVVEVLNPLAR++KSIGT++KELAELQE+LA+AH QVH+SE RV+
Sbjct: 76 WRARQDLLTIMVLHNKVVEVLNPLAREFKSIGTLRKELAELQEELAKAHNQVHLSETRVS 135
Query: 150 TALDKLAYMEALVNDRLLQDRHTSGTDQTCAS--PSTSKQSLDIVKGKLPRKSLNVSGPV 207
+ALDKLA ME LVNDRLLQD +S + C S PSTS S +V K PR+SLNVSGPV
Sbjct: 136 SALDKLAQMETLVNDRLLQDGGSSASTAECTSLAPSTSSAS-RVVNKKPPRRSLNVSGPV 194
Query: 208 QPYNTRLKNFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLH 260
QPYN LKNFW+PVAFS+DLKDDTM P WVIFRGKDG PGCV NTCAHRACPLH
Sbjct: 195 QPYNPSLKNFWYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLH 254
Query: 261 LGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 320
LGSVNEGRIQCPYHGWEYSTDGKCEKMPST++ NV+I+SLPCFEQEGM+WIWPG++PP +
Sbjct: 255 LGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLNVRIRSLPCFEQEGMVWIWPGNDPPKS 314
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 380
TIP LLPPSGF IHAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT
Sbjct: 315 TIPSLLPPSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 374
Query: 381 PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRK 440
P+SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+QC+THLHQLH+CLPSSR
Sbjct: 375 PSSGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQCSTHLHQLHICLPSSRN 434
Query: 441 KTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVG 500
KTRLLYRMSLDFA +KHVPFM LW HFAE+VLNEDLRLVLGQQERM NGANVWN PV
Sbjct: 435 KTRLLYRMSLDFAPWIKHVPFMHILWSHFAEKVLNEDLRLVLGQQERMINGANVWNWPVS 494
Query: 501 YDKLGVRYRLWRDALEKGAKQLPF 524
YDKLG+RYRLWRDA+E+G +LPF
Sbjct: 495 YDKLGIRYRLWRDAIERGVDRLPF 518
>gi|5478807|dbj|BAA82484.1| chlorophyll b synthase [Arabidopsis thaliana]
Length = 536
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/532 (75%), Positives = 458/532 (86%), Gaps = 9/532 (1%)
Query: 2 TAIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
A+ + +ALSLPIS R + ++ KK V+G FRVFA+FG+E GLV+KKS W LFDVED
Sbjct: 3 AAVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVED 62
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
PRSK P KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLNPLAR+YKS
Sbjct: 63 PRSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKS 122
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL R + D+
Sbjct: 123 IGTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDKPS 182
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------- 232
+S + S LD K KSLNVSGPV PY+ LKNFW+PVAF+ DLK DTM
Sbjct: 183 SSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFE 242
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 243 QPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKL 302
Query: 293 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 352
VKIKSLPC EQEGMIWIWPGDEPP +P L PPSGF IHAE+VM+LP+EHGLLLDNL
Sbjct: 303 LKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNL 362
Query: 353 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
LDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISK
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISK 422
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
PGKLEG++T+QCATH HQLHVCLPSS+ KTRLL RMSLDFA +LK++PFM++LWRHFAEQ
Sbjct: 423 PGKLEGKSTQQCATHFHQLHVCLPSSKNKTRLLCRMSLDFAPILKNLPFMEHLWRHFAEQ 482
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
VLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRLWR+A+++G +LPF
Sbjct: 483 VLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534
>gi|224066823|ref|XP_002302233.1| predicted protein [Populus trichocarpa]
gi|222843959|gb|EEE81506.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/470 (86%), Positives = 433/470 (92%), Gaps = 7/470 (1%)
Query: 64 VPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTM 123
+PQ KGKFLD QALEVARYDIQYCDWRARQD+LTIM+LHEKVVEVLNPLARDYK IGTM
Sbjct: 1 MPQFKGKFLDFYQALEVARYDIQYCDWRARQDLLTIMILHEKVVEVLNPLARDYKCIGTM 60
Query: 124 KKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCASPS 183
KKELAELQ++LAQAHRQVHISEARVATALDKLAYME LVNDRLLQDR+ + DQ SPS
Sbjct: 61 KKELAELQDELAQAHRQVHISEARVATALDKLAYMEELVNDRLLQDRNQAEPDQESPSPS 120
Query: 184 TSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-------EPWV 236
TS QSLD VK K PRK+LNVSGPVQPY+ RLKNFW+PVAFSTDLKDDTM EPWV
Sbjct: 121 TSTQSLDTVKRKSPRKNLNVSGPVQPYHPRLKNFWYPVAFSTDLKDDTMIPIDCFEEPWV 180
Query: 237 IFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK 296
+FRGKDG PGCV+NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST+L +VK
Sbjct: 181 LFRGKDGKPGCVRNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTRLLDVK 240
Query: 297 IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLA 356
+KSLPCFEQEGMIWIWPG +PP A++P L PP GF++HAEIVMELP+EHGLLLDNLLDLA
Sbjct: 241 VKSLPCFEQEGMIWIWPGSDPPAASLPSLQPPPGFQVHAEIVMELPVEHGLLLDNLLDLA 300
Query: 357 HAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 416
HAPFTHTSTFAKGW+VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL
Sbjct: 301 HAPFTHTSTFAKGWTVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 360
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 476
EGQ+TR+CATHLHQLHVCLPSSR+KTRLLYRMSLDFA VLKH PFM YLW+HFAEQVLNE
Sbjct: 361 EGQSTRECATHLHQLHVCLPSSRQKTRLLYRMSLDFAGVLKHFPFMHYLWKHFAEQVLNE 420
Query: 477 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 526
DLRLVLGQQERM NGANVWN PV YDKLGVRYRLWRDA+E+GAKQLPF K
Sbjct: 421 DLRLVLGQQERMINGANVWNWPVSYDKLGVRYRLWRDAVERGAKQLPFRK 470
>gi|338173749|gb|AEI83421.1| chlorophyllide a oxygenase [Camellia sinensis]
Length = 536
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/535 (76%), Positives = 453/535 (84%), Gaps = 10/535 (1%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
M+AIAT A +SLPISL R +K + K+ VR GF VFA+FGEEGGL DKKSAWSTLFDVEDP
Sbjct: 1 MSAIATVATISLPISLSRSSKFSNKRGVRAGFGVFAVFGEEGGLEDKKSAWSTLFDVEDP 60
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSKVPQCKGKFLDVNQALE+ R+DIQYCDWRARQD+LTIMLLHEKVVEVLNPLARDYKSI
Sbjct: 61 RSKVPQCKGKFLDVNQALELVRFDIQYCDWRARQDLLTIMLLHEKVVEVLNPLARDYKSI 120
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC- 179
GT+KK+LAELQ++LAQAH+QVHISEARV+TALDKLAYME LV+DRLLQD+ T+ T+ C
Sbjct: 121 GTLKKDLAELQDELAQAHKQVHISEARVSTALDKLAYMEELVHDRLLQDKPTT-TESECM 179
Query: 180 -ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------ 232
S STS +SLD V+ KL RK LNVSGPVQPY+ RLKNFW+PVAFSTDLKDDTM
Sbjct: 180 SPSSSTSTESLDTVRNKLSRKILNVSGPVQPYHPRLKNFWYPVAFSTDLKDDTMVPIDCF 239
Query: 233 -EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ 291
EPWVIFRGKDG PGCVQNTCAHRACPLHLG +NEGRIQCPYHGWEYSTDGKC+KMPST+
Sbjct: 240 EEPWVIFRGKDGKPGCVQNTCAHRACPLHLGPINEGRIQCPYHGWEYSTDGKCKKMPSTR 299
Query: 292 LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 351
L N KIK+LPCFEQEGMIWIWPG++ PTATIP L PP GF+IHAEIVMELP+EHGLLLDN
Sbjct: 300 LVNAKIKALPCFEQEGMIWIWPGNDAPTATIPSLQPPPGFKIHAEIVMELPVEHGLLLDN 359
Query: 352 LLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 411
LLDLAHAPFTHTSTFAKGWSVPSL KFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS
Sbjct: 360 LLDLAHAPFTHTSTFAKGWSVPSLAKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 419
Query: 412 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 471
PG + + ++ +LKHVPFMQYLW++FAE
Sbjct: 420 SPGNWKDRALSSALRIFTNFMYAYHHLDRRQGYCTECRWILLPMLKHVPFMQYLWKYFAE 479
Query: 472 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 526
+VLNEDLR+V+GQQ+RM NGANVWNLPV YDKLGVRYRLWRDA+++GAKQLPF K
Sbjct: 480 KVLNEDLRIVIGQQDRMLNGANVWNLPVSYDKLGVRYRLWRDAVDQGAKQLPFSK 534
>gi|242059995|ref|XP_002459143.1| hypothetical protein SORBIDRAFT_03g046660 [Sorghum bicolor]
gi|241931118|gb|EES04263.1| hypothetical protein SORBIDRAFT_03g046660 [Sorghum bicolor]
Length = 542
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/535 (74%), Positives = 452/535 (84%), Gaps = 15/535 (2%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T ++LSL P L +P+ ++K V GG +V+A+ E+G K + LF V+D
Sbjct: 1 MNTVSSLSLVPHLLIKPSIACFSRKGVGRYGGIKVYAVLREDGAEFAKNNNLEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P + P KGKFLDVN+ALEV R+DIQYCDWRARQD+LTIMLLH KVVEVLNPLAR++KS
Sbjct: 61 PGPRCPIKKGKFLDVNEALEVVRFDIQYCDWRARQDLLTIMLLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGT---D 176
IGT++KELAELQ++L +AH QVH+SEARV++ALDKLA+ME LVNDRLL SGT +
Sbjct: 121 IGTLRKELAELQQELEKAHNQVHLSEARVSSALDKLAHMETLVNDRLLPPDGASGTSTAE 180
Query: 177 QTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP-- 234
T PSTS + + K PR+SLNVSGPV+PYN LKNFW+PVAFS+DLKDDTM P
Sbjct: 181 STSLVPSTSSTA-HVRAKKQPRRSLNVSGPVKPYNPSLKNFWYPVAFSSDLKDDTMVPID 239
Query: 235 -----WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 289
WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS
Sbjct: 240 CFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 299
Query: 290 TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLL 349
T++ NV+I+SLPCFEQEGM+WIWPGD+PP ATIP LLPPSGF IHAEIVMELP+EHGLLL
Sbjct: 300 TKMLNVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLPPSGFTIHAEIVMELPVEHGLLL 359
Query: 350 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 409
DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG
Sbjct: 360 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 419
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 469
ISKPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKHVP M LW HF
Sbjct: 420 ISKPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLLWSHF 479
Query: 470 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
AE+VLNEDLRLVLGQQERM NGAN+WN PV YDKLG+RYRLWRDA+E+G+ +LPF
Sbjct: 480 AEKVLNEDLRLVLGQQERMINGANIWNWPVSYDKLGIRYRLWRDAVERGSDRLPF 534
>gi|226490898|ref|NP_001151343.1| LOC100284976 [Zea mays]
gi|195645962|gb|ACG42449.1| chlorophyllide a oxygenase [Zea mays]
gi|223948119|gb|ACN28143.1| unknown [Zea mays]
gi|413951238|gb|AFW83887.1| chlorophyllide a oxygenase [Zea mays]
Length = 542
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/535 (74%), Positives = 448/535 (83%), Gaps = 15/535 (2%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A LSL P L +P+ ++K V GG +V+A+ ++G K + LF V+D
Sbjct: 1 MNTVALLSLAPQLLIKPSLTCFSRKGVGRYGGIKVYAVLRDDGAEFAKNNNLEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVN+ALEV R+DIQYCDWRAR D+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIKKGKFLDVNEALEVVRFDIQYCDWRARHDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQ-- 177
IGT++KELAELQ++LA+AH QVH+SE RV++ALDKLA+ME LVNDRLL S T
Sbjct: 121 IGTLRKELAELQQELAKAHNQVHLSETRVSSALDKLAHMETLVNDRLLPPDGASSTSTAQ 180
Query: 178 -TCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP-- 234
T PSTS + + K PR+ LNVSGPV+PYN LKNFW+PVAFS+DLKDDTM P
Sbjct: 181 PTSLVPSTSSTA-RVRAKKPPRRGLNVSGPVKPYNPSLKNFWYPVAFSSDLKDDTMVPIA 239
Query: 235 -----WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 289
WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS
Sbjct: 240 CFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 299
Query: 290 TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLL 349
T++ NV+I+SLPCFEQEGM+WIWPGD+PP ATIP LLPPSGF +HAEIVMELP+EHGLLL
Sbjct: 300 TKMLNVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLPPSGFTVHAEIVMELPVEHGLLL 359
Query: 350 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 409
DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG
Sbjct: 360 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 419
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 469
ISKPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKHVP M LW HF
Sbjct: 420 ISKPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLLWSHF 479
Query: 470 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
AE+VLNEDLRLVLGQQERM NGANVWN PV YDKLGVRYRLWRD +E+G+++LPF
Sbjct: 480 AEKVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGVRYRLWRDTVERGSERLPF 534
>gi|9944967|gb|AAG03051.1|AF284781_1 LLS1 protein [Oryza sativa Japonica Group]
Length = 540
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/534 (73%), Positives = 446/534 (83%), Gaps = 15/534 (2%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A+LSL P L +P+ + ++K V GG +V+A+ G++G K +AW LF V+D
Sbjct: 1 MTTVASLSLLPHLLIKPSFRCCSRKGVGRYGGIKVYAVLGDDGADYAKNNAWEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVNQALEV R+DIQYCDWRARQD+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIAKGKFLDVNQALEVVRFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT++KELAELQE+LA+AH QVH+SE RV++ALDKLA ME LVNDRLLQD +S + C
Sbjct: 121 IGTLRKELAELQEELAKAHNQVHLSETRVSSALDKLAQMETLVNDRLLQDGGSSASTAEC 180
Query: 180 AS--PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP--- 234
S PSTS S +V K PR+SLNVSGPVQPYN LKNFW+PVAFS+DLKDDTM P
Sbjct: 181 TSLAPSTSSAS-RVVNKKPPRRSLNVSGPVQPYNPSLKNFWYPVAFSSDLKDDTMVPIDC 239
Query: 235 ----WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 290
WVIFRGKDG PGCV NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST
Sbjct: 240 FEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 299
Query: 291 QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLD 350
++ NV+I+SLPCFEQEGM+WIWPG++PP +TIP LLPPSGF IHAEIVMELP+EHGLLLD
Sbjct: 300 KMLNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSLLPPSGFTIHAEIVMELPVEHGLLLD 359
Query: 351 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 410
NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEFRPPCMVLSTIGI
Sbjct: 360 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGI 419
Query: 411 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 470
SKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRMSLDFA +KHVPFM LW HFA
Sbjct: 420 SKPGKLEGKSTKQCSTHLHQLHICLPSSRNKTRLLYRMSLDFAPWIKHVPFMHILWSHFA 479
Query: 471 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
E+VLNEDLR+VLGQQ+ L KLG+RYRLWRDA+E+G +LPF
Sbjct: 480 EKVLNEDLRVVLGQQDGC-QWRKCLELASIICKLGIRYRLWRDAIERGVDRLPF 532
>gi|83317156|gb|ABC02752.1| chlorophyll synthase [Phyllostachys edulis]
Length = 541
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/533 (70%), Positives = 437/533 (81%), Gaps = 12/533 (2%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A+LSL P L +P+ ++K V GG +V+A+ ++ K + W LF V+D
Sbjct: 1 MTTVASLSLVPHLLIKPSFGCFSRKGVGRDGGIKVYAVLRDDKAEYSKNNNWEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVNQALEV R+DIQYCDWRARQD+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIAKGKFLDVNQALEVVRFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
+ T++KELAELQ++L +AH QVH+SEARV++ALDKLA ME LVNDRLLQD +S + C
Sbjct: 121 VETLRKELAELQQELTKAHNQVHLSEARVSSALDKLAQMETLVNDRLLQDGSSSASTAEC 180
Query: 180 ASPSTSKQSLDIVKGK-LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---- 234
S + S S K PR+++NVSGPV+PYN +L+NFW+PVAFS+DLKDDTM P
Sbjct: 181 TSLTPSTSSTTHAGAKKQPRRNINVSGPVKPYNPKLQNFWYPVAFSSDLKDDTMVPIDCF 240
Query: 235 ---WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ 291
WVIFRGKDG PGCVQNTCAHRACPLHLGSVN GRIQCPYHGWEYSTDGKCEKMPST+
Sbjct: 241 EEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNGGRIQCPYHGWEYSTDGKCEKMPSTK 300
Query: 292 LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 351
+ NV+I+SLPCFEQEGM+WIWPGD+PP +TIP LLP SGF IHAEIVMELP+ HGLLLDN
Sbjct: 301 MLNVRIQSLPCFEQEGMVWIWPGDDPPKSTIPSLLPRSGFTIHAEIVMELPVRHGLLLDN 360
Query: 352 LLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 411
LLD AHAPFT T TFAKGWSVPSLV+FL P+ L GYWD + +EFRPPCMVLSTIGIS
Sbjct: 361 LLDTAHAPFTLTFTFAKGWSVPSLVEFLAPSPLLPGYWDLSQMIVEFRPPCMVLSTIGIS 420
Query: 412 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 471
KPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKH+PFM LW +FAE
Sbjct: 421 KPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHIPFMHLLWSYFAE 480
Query: 472 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
+VLNEDLRLVLGQQERM NGANVWN PV YDKLG+RYR WRDA+E+GA +LPF
Sbjct: 481 KVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGIRYRQWRDAVERGADRLPF 533
>gi|357126896|ref|XP_003565123.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like
[Brachypodium distachyon]
Length = 550
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/542 (69%), Positives = 445/542 (82%), Gaps = 21/542 (3%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGG-LVDKKSAWSTLFDVE 58
+ T A+LSL P L +P+ + ++K V GG +V+A+ ++ + + W LF V+
Sbjct: 1 MNTVASLSLVPRLLIKPSFRCLSRKGVGRDGGIKVYAVLRDDSADYLKDNNQWEALFHVD 60
Query: 59 DPRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYK 118
DP +VP KG+FLD QAL+VAR+DIQYCDWRARQD+LTIM+LH KVVEVLNPLARD+K
Sbjct: 61 DPGPRVPIEKGQFLDAKQALDVARFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLARDFK 120
Query: 119 SIGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQT 178
S+G ++K+LA LQE+LA+AH Q+++SE+RV++ALDKLA ME +VN+RLL D +
Sbjct: 121 SVGNLRKDLAGLQEELAKAHNQLYLSESRVSSALDKLAQMETVVNERLLSDGSAFASTAD 180
Query: 179 CAS--PSTS-------KQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD 229
CA+ PSTS + + K R+SLN+SGPV+PYN LKNFW+PVAFS+DLKD
Sbjct: 181 CATLDPSTSLDLDPSTSSTTHVGAKKAKRRSLNISGPVKPYNPNLKNFWYPVAFSSDLKD 240
Query: 230 DTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDG 282
DTM P WVIFRGKD PGCVQNTCAHRACPL LGSVNEGRI CPYHGWEYSTDG
Sbjct: 241 DTMVPIDCFEEQWVIFRGKDRRPGCVQNTCAHRACPLDLGSVNEGRITCPYHGWEYSTDG 300
Query: 283 KCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELP 342
KCEKMPST++ NV+I++LPCFEQEGM+WIWPGD+ PT TIP LLPPSGF IHAEIVMELP
Sbjct: 301 KCEKMPSTKMLNVRIRALPCFEQEGMVWIWPGDDTPTPTIPSLLPPSGFTIHAEIVMELP 360
Query: 343 IEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPC 402
+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS VKFLTP SGLQGYWDPYPIDMEFRPPC
Sbjct: 361 VEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVKFLTPTSGLQGYWDPYPIDMEFRPPC 420
Query: 403 MVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM 462
MVLSTIGISKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRMSLDFA +KH+PFM
Sbjct: 421 MVLSTIGISKPGKLEGKSTQQCSTHLHQLHICLPSSRNKTRLLYRMSLDFAPWIKHIPFM 480
Query: 463 QYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQL 522
LW HFAE+VLNEDLRLVLGQQERMN+GANVWN PV YDKLG+RYRLWRDA+E+G +L
Sbjct: 481 HLLWSHFAEKVLNEDLRLVLGQQERMNSGANVWNWPVSYDKLGIRYRLWRDAVERGVDRL 540
Query: 523 PF 524
PF
Sbjct: 541 PF 542
>gi|18854993|gb|AAL79685.1|AC087599_4 putative chlorophyll synthase [Oryza sativa Japonica Group]
Length = 519
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/503 (71%), Positives = 415/503 (82%), Gaps = 8/503 (1%)
Query: 30 GGFRVFALFGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCD 89
G +V+A+ G++ K + LF V++P P KG FLDVNQALEV R+ IQYCD
Sbjct: 9 GRIKVYAVLGDDEAQHAKNNMRGALFHVDNPGPMAPIAKGNFLDVNQALEVVRFGIQYCD 68
Query: 90 WRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHISEARVA 149
WRARQD+LTIM+LH KVVEVL LA ++KS GT++KELAELQE+LA+AH QVH+SE R +
Sbjct: 69 WRARQDLLTIMVLHNKVVEVLKSLAIEFKSNGTLRKELAELQEELAKAHNQVHLSETRAS 128
Query: 150 TALDKLAYMEALVNDRLLQDRHTSGT-DQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQ 208
+ALDKLA + LVNDRLLQD +S + D + S + + V K R SL+VSGPVQ
Sbjct: 129 SALDKLAQADNLVNDRLLQDGGSSASIDNYVSLASRTSSASRFVNKKTLRPSLDVSGPVQ 188
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHL 261
PYN LKNFW+PV FS DLKDDTM P WVIFRGKDG PGCVQNTCAHRACPLHL
Sbjct: 189 PYNPNLKNFWYPVVFSGDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHL 248
Query: 262 GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
GSV+EGRIQCP+HGWEYSTDGKCEKMP+T+L NV+I+SLPCFEQEGM+WIWPGD P +T
Sbjct: 249 GSVSEGRIQCPFHGWEYSTDGKCEKMPATKLLNVRIRSLPCFEQEGMVWIWPGDGTPEST 308
Query: 322 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 381
IP L PPSGF IHAE+VMELP+EHGLLLDNLLD+AHAPF HTSTFAKGWSVPSLVKFLTP
Sbjct: 309 IPSLQPPSGFTIHAEMVMELPVEHGLLLDNLLDIAHAPFAHTSTFAKGWSVPSLVKFLTP 368
Query: 382 ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKK 441
ASGLQGYWDPYPIDMEFRPPCMVLST GISKPGKLEG++ +QC+THLHQLH+CLPSSR K
Sbjct: 369 ASGLQGYWDPYPIDMEFRPPCMVLSTTGISKPGKLEGKSIKQCSTHLHQLHICLPSSRNK 428
Query: 442 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGY 501
TR+LY+MSL+FA LKH+PFM LW HF E+VLNEDLRLVLGQQERM NGANVWN PV Y
Sbjct: 429 TRMLYQMSLNFAPWLKHIPFMHILWSHFGEKVLNEDLRLVLGQQERMINGANVWNWPVSY 488
Query: 502 DKLGVRYRLWRDALEKGAKQLPF 524
DKLG+RYRLWRDA+E+GA +LPF
Sbjct: 489 DKLGIRYRLWRDAIERGANRLPF 511
>gi|115483520|ref|NP_001065430.1| Os10g0567100 [Oryza sativa Japonica Group]
gi|78709025|gb|ABB48000.1| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113639962|dbj|BAF27267.1| Os10g0567100 [Oryza sativa Japonica Group]
gi|215693283|dbj|BAG88665.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185041|gb|EEC67468.1| hypothetical protein OsI_34699 [Oryza sativa Indica Group]
gi|222613295|gb|EEE51427.1| hypothetical protein OsJ_32507 [Oryza sativa Japonica Group]
Length = 542
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/503 (71%), Positives = 415/503 (82%), Gaps = 8/503 (1%)
Query: 30 GGFRVFALFGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCD 89
G +V+A+ G++ K + LF V++P P KG FLDVNQALEV R+ IQYCD
Sbjct: 32 GRIKVYAVLGDDEAQHAKNNMRGALFHVDNPGPMAPIAKGNFLDVNQALEVVRFGIQYCD 91
Query: 90 WRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHISEARVA 149
WRARQD+LTIM+LH KVVEVL LA ++KS GT++KELAELQE+LA+AH QVH+SE R +
Sbjct: 92 WRARQDLLTIMVLHNKVVEVLKSLAIEFKSNGTLRKELAELQEELAKAHNQVHLSETRAS 151
Query: 150 TALDKLAYMEALVNDRLLQDRHTSGT-DQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQ 208
+ALDKLA + LVNDRLLQD +S + D + S + + V K R SL+VSGPVQ
Sbjct: 152 SALDKLAQADNLVNDRLLQDGGSSASIDNYVSLASRTSSASRFVNKKTLRPSLDVSGPVQ 211
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHL 261
PYN LKNFW+PV FS DLKDDTM P WVIFRGKDG PGCVQNTCAHRACPLHL
Sbjct: 212 PYNPNLKNFWYPVVFSGDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHL 271
Query: 262 GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
GSV+EGRIQCP+HGWEYSTDGKCEKMP+T+L NV+I+SLPCFEQEGM+WIWPGD P +T
Sbjct: 272 GSVSEGRIQCPFHGWEYSTDGKCEKMPATKLLNVRIRSLPCFEQEGMVWIWPGDGTPEST 331
Query: 322 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 381
IP L PPSGF IHAE+VMELP+EHGLLLDNLLD+AHAPF HTSTFAKGWSVPSLVKFLTP
Sbjct: 332 IPSLQPPSGFTIHAEMVMELPVEHGLLLDNLLDIAHAPFAHTSTFAKGWSVPSLVKFLTP 391
Query: 382 ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKK 441
ASGLQGYWDPYPIDMEFRPPCMVLST GISKPGKLEG++ +QC+THLHQLH+CLPSSR K
Sbjct: 392 ASGLQGYWDPYPIDMEFRPPCMVLSTTGISKPGKLEGKSIKQCSTHLHQLHICLPSSRNK 451
Query: 442 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGY 501
TR+LY+MSL+FA LKH+PFM LW HF E+VLNEDLRLVLGQQERM NGANVWN PV Y
Sbjct: 452 TRMLYQMSLNFAPWLKHIPFMHILWSHFGEKVLNEDLRLVLGQQERMINGANVWNWPVSY 511
Query: 502 DKLGVRYRLWRDALEKGAKQLPF 524
DKLG+RYRLWRDA+E+GA +LPF
Sbjct: 512 DKLGIRYRLWRDAIERGANRLPF 534
>gi|385722324|gb|AFI73228.1| chlorophyllide a oxygenase [Hordeum vulgare]
gi|385722326|gb|AFI73229.1| chlorophyllide a oxygenase [Hordeum vulgare subsp. vulgare]
gi|385722328|gb|AFI73230.1| chlorophyllide a oxygenase [Hordeum vulgare]
Length = 550
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/542 (68%), Positives = 440/542 (81%), Gaps = 21/542 (3%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGG-LVDKKSAWSTLFDVE 58
+ T A+LSL P L +P+ + ++K V GG +V+A+ ++ + W LF V+
Sbjct: 1 MTTVASLSLVPHLLIKPSFRCLSRKGVGRYGGIKVYAVLRDDSADYLKDNHHWEALFHVD 60
Query: 59 DPRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYK 118
DP +VP KG++L+ QAL+V R+DIQYCDWRARQD+LTIM+LH KVVEVLNPLARD+K
Sbjct: 61 DPGPRVPIEKGQYLEAKQALDVVRFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLARDFK 120
Query: 119 SIGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQT 178
S+GT++K+L LQE+LA+AH Q+++SE+RV++ALDKLA ME +VN+RLL D
Sbjct: 121 SVGTLRKDLDGLQEELAKAHNQLYLSESRVSSALDKLAQMETVVNERLLSDGSAFANTAD 180
Query: 179 CAS---------PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD 229
CAS +++ ++ + K R+SLN+SGPV+PY+ LKNFW+PVAFS DLKD
Sbjct: 181 CASLDPSTSLDTTTSTSSTVRVGAKKPKRRSLNISGPVKPYSANLKNFWYPVAFSGDLKD 240
Query: 230 DTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDG 282
DTM P WVIFRGKD PGCVQNTCAHRACPL LGSVNEGRI CPYHGWEYSTDG
Sbjct: 241 DTMVPIDCFEEQWVIFRGKDKRPGCVQNTCAHRACPLDLGSVNEGRITCPYHGWEYSTDG 300
Query: 283 KCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELP 342
KCEKMPST++ NV+I++LPCFEQEGM+WIWPGD+ PT TIP LLPPSGF IHAEIVMELP
Sbjct: 301 KCEKMPSTKMLNVRIRALPCFEQEGMVWIWPGDDTPTPTIPSLLPPSGFTIHAEIVMELP 360
Query: 343 IEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPC 402
+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS VKFLTP SGLQGYWDPYPIDMEFRPPC
Sbjct: 361 VEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVKFLTPTSGLQGYWDPYPIDMEFRPPC 420
Query: 403 MVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM 462
MVLSTIGISKPGKLEG++T+QCATHLHQLHVCLPSS KTRLLYRMSLDFA +KH+PFM
Sbjct: 421 MVLSTIGISKPGKLEGKSTQQCATHLHQLHVCLPSSTNKTRLLYRMSLDFAPWMKHMPFM 480
Query: 463 QYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQL 522
LW HFAE+VLNEDLRLVLGQQ+RMNNGANVWN PV YDKLG+RYRLWRDA+E+G +L
Sbjct: 481 HLLWSHFAEKVLNEDLRLVLGQQDRMNNGANVWNWPVSYDKLGIRYRLWRDAVERGVDRL 540
Query: 523 PF 524
PF
Sbjct: 541 PF 542
>gi|326500120|dbj|BAJ90895.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 550
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/542 (68%), Positives = 439/542 (80%), Gaps = 21/542 (3%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGG-LVDKKSAWSTLFDVE 58
+ T A+LSL P L +P+ + ++K V GG +V+A+ ++ + W LF V+
Sbjct: 1 MTTVASLSLVPHLLIKPSFRCLSRKGVGRYGGIKVYAVLRDDSADYLKDNHHWEALFHVD 60
Query: 59 DPRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYK 118
DP +VP KG++L+ QAL+V R+DIQYCDWRARQD+LTIM+LH KVVEVLNPLARD+K
Sbjct: 61 DPGPRVPIEKGQYLEAKQALDVVRFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLARDFK 120
Query: 119 SIGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQT 178
S+GT++K+L LQE+LA+AH Q+++SE+RV++ALDKLA ME +VN+RLL D
Sbjct: 121 SVGTLRKDLDGLQEELAKAHNQLYLSESRVSSALDKLAQMETVVNERLLSDGSAFANTAD 180
Query: 179 CAS---------PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD 229
CAS +++ ++ + K R+SLN+SGPV+PY+ LKNFW+PVAFS DLKD
Sbjct: 181 CASLDPSTSLDTTTSTSSTVRVGAKKPKRRSLNISGPVKPYSANLKNFWYPVAFSGDLKD 240
Query: 230 DTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDG 282
DTM P WVIFRGKD PGCVQNTCAHRACPL LGSVNEGRI CPYHGWEYSTDG
Sbjct: 241 DTMVPIDCFEEQWVIFRGKDKRPGCVQNTCAHRACPLDLGSVNEGRITCPYHGWEYSTDG 300
Query: 283 KCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELP 342
KCEKMPST++ NV+I++LPCFEQEGM+WIWPGD+ PT TIP LLP SGF IHAEIVMELP
Sbjct: 301 KCEKMPSTKMLNVRIRALPCFEQEGMVWIWPGDDTPTPTIPSLLPLSGFTIHAEIVMELP 360
Query: 343 IEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPC 402
+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS VKFLTP SGLQGYWDPYPIDMEFRPPC
Sbjct: 361 VEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVKFLTPTSGLQGYWDPYPIDMEFRPPC 420
Query: 403 MVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM 462
MVLSTIGISKPGKLEG++T+QCATHLHQLHVCLPSS KTRLLYRMSLDFA +KH+PFM
Sbjct: 421 MVLSTIGISKPGKLEGKSTQQCATHLHQLHVCLPSSTNKTRLLYRMSLDFAPWMKHMPFM 480
Query: 463 QYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQL 522
LW HFAE+VLNEDLRLVLGQQ+RMNNGANVWN PV YDKLG+RYRLWRDA+E+G +L
Sbjct: 481 HLLWSHFAEKVLNEDLRLVLGQQDRMNNGANVWNWPVSYDKLGIRYRLWRDAVERGVDRL 540
Query: 523 PF 524
PF
Sbjct: 541 PF 542
>gi|414878608|tpg|DAA55739.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 538
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/535 (71%), Positives = 442/535 (82%), Gaps = 20/535 (3%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A+L L P L +P+ ++K V GG +V+A+ E+G + + LF V+D
Sbjct: 1 MNTVASLPLAPRLLIKPSLACFSRKDVGRYGGIKVYAVLREDGAEFARNNNLEALFQVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P + P KFLDVN+ALEV R+DIQYCDWRARQD+LTIMLLH KVVEVLNPLAR++KS
Sbjct: 61 PGPRAPV--KKFLDVNEALEVVRFDIQYCDWRARQDLLTIMLLHSKVVEVLNPLAREFKS 118
Query: 120 IGTMKKELAELQEDLAQAH-RQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQT 178
IGT++KELAELQ++L +AH +QVH+SEARV++ALDKLA+ME LV+ + TS +
Sbjct: 119 IGTLRKELAELQQELEKAHNQQVHLSEARVSSALDKLAHMETLVSAPSTAEPPTSSSLSA 178
Query: 179 CASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD-DTMEP--- 234
AS + ++ K K PR+ L+VSGPV+PYN LKNFW+PVAFS+DLK DTM P
Sbjct: 179 TASSTARVRA----KNKQPRRRLDVSGPVKPYNPSLKNFWYPVAFSSDLKAPDTMVPIDC 234
Query: 235 ----WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 290
WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST
Sbjct: 235 FEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 294
Query: 291 QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLD 350
++ +V+I+SLPCFEQEGM+WIWPGD+PP ATIP LLPPSGF +HAEIVMELP+EHGLLLD
Sbjct: 295 KMLDVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLPPSGFTVHAEIVMELPVEHGLLLD 354
Query: 351 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 410
NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI
Sbjct: 355 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 414
Query: 411 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 470
SKPGKL+G++TRQC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKHVP M LW HFA
Sbjct: 415 SKPGKLQGKSTRQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLLWSHFA 474
Query: 471 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGA-KQLPF 524
E+VLNEDLRLVLGQQE M +GANVWN PV YDKLG+RYRLWRDA+E+GA +LPF
Sbjct: 475 EKVLNEDLRLVLGQQEGMIDGANVWNWPVSYDKLGIRYRLWRDAVERGADDRLPF 529
>gi|42571757|ref|NP_973969.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
gi|332193914|gb|AEE32035.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
Length = 511
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/481 (74%), Positives = 413/481 (85%), Gaps = 9/481 (1%)
Query: 2 TAIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
A+ + +ALSLPIS R + ++ KK V+G FRVFA+FG+E GLV+KKS W LFDVED
Sbjct: 3 AAVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVED 62
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
PRSK P KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLNPLAR+YKS
Sbjct: 63 PRSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKS 122
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL R + D+
Sbjct: 123 IGTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDKPS 182
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------- 232
+S + S LD K KSLNVSGPV PY+ LKNFW+PVAF+ DLK DTM
Sbjct: 183 SSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFE 242
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 243 QPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKL 302
Query: 293 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 352
VKIKSLPC EQEGMIWIWPGDEPP +P L PPSGF IHAE+VM+LP+EHGLLLDNL
Sbjct: 303 LKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNL 362
Query: 353 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
LDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISK
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISK 422
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
PGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSLDFA +LK++PFM++LWRHFAEQ
Sbjct: 423 PGKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQ 482
Query: 473 V 473
V
Sbjct: 483 V 483
>gi|110289598|gb|AAP55073.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
Length = 527
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/483 (74%), Positives = 412/483 (85%), Gaps = 14/483 (2%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A+LSL P L +P+ + ++K V GG +V+A+ G++G K +AW LF V+D
Sbjct: 1 MTTVASLSLLPHLLIKPSFRCCSRKGVGRYGGIKVYAVLGDDGADYAKNNAWEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVNQALEV R+DIQYCDWRARQD+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIAKGKFLDVNQALEVVRFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT++KELAELQE+LA+AH QVH+SE RV++ALDKLA ME LVNDRLLQD +S + C
Sbjct: 121 IGTLRKELAELQEELAKAHNQVHLSETRVSSALDKLAQMETLVNDRLLQDGGSSASTAEC 180
Query: 180 AS--PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP--- 234
S PSTS S +V K PR+SLNVSGPVQPYN LKNFW+PVAFS+DLKDDTM P
Sbjct: 181 TSLAPSTSSAS-RVVNKKPPRRSLNVSGPVQPYNPSLKNFWYPVAFSSDLKDDTMVPIDC 239
Query: 235 ----WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 290
WVIFRGKDG PGCV NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST
Sbjct: 240 FEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 299
Query: 291 QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLD 350
++ NV+I+SLPCFEQEGM+WIWPG++PP +TIP LLPPSGF IHAEIVMELP+EHGLLLD
Sbjct: 300 KMLNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSLLPPSGFTIHAEIVMELPVEHGLLLD 359
Query: 351 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 410
NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEFRPPCMVLSTIGI
Sbjct: 360 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGI 419
Query: 411 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 470
SKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRMSLDFA +KHVPFM LW HFA
Sbjct: 420 SKPGKLEGKSTKQCSTHLHQLHICLPSSRNKTRLLYRMSLDFAPWIKHVPFMHILWSHFA 479
Query: 471 EQV 473
E+V
Sbjct: 480 EKV 482
>gi|413951240|gb|AFW83889.1| hypothetical protein ZEAMMB73_249573 [Zea mays]
Length = 487
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/484 (72%), Positives = 400/484 (82%), Gaps = 15/484 (3%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A LSL P L +P+ ++K V GG +V+A+ ++G K + LF V+D
Sbjct: 1 MNTVALLSLAPQLLIKPSLTCFSRKGVGRYGGIKVYAVLRDDGAEFAKNNNLEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVN+ALEV R+DIQYCDWRAR D+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIKKGKFLDVNEALEVVRFDIQYCDWRARHDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQ-- 177
IGT++KELAELQ++LA+AH QVH+SE RV++ALDKLA+ME LVNDRLL S T
Sbjct: 121 IGTLRKELAELQQELAKAHNQVHLSETRVSSALDKLAHMETLVNDRLLPPDGASSTSTAQ 180
Query: 178 -TCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP-- 234
T PSTS + + K PR+ LNVSGPV+PYN LKNFW+PVAFS+DLKDDTM P
Sbjct: 181 PTSLVPSTSSTA-RVRAKKPPRRGLNVSGPVKPYNPSLKNFWYPVAFSSDLKDDTMVPIA 239
Query: 235 -----WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 289
WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS
Sbjct: 240 CFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 299
Query: 290 TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLL 349
T++ NV+I+SLPCFEQEGM+WIWPGD+PP ATIP LLPPSGF +HAEIVMELP+EHGLLL
Sbjct: 300 TKMLNVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLPPSGFTVHAEIVMELPVEHGLLL 359
Query: 350 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 409
DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG
Sbjct: 360 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 419
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 469
ISKPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKHVP M LW HF
Sbjct: 420 ISKPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLLWSHF 479
Query: 470 AEQV 473
AE+
Sbjct: 480 AEKA 483
>gi|413951239|gb|AFW83888.1| hypothetical protein ZEAMMB73_249573 [Zea mays]
Length = 512
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/487 (72%), Positives = 401/487 (82%), Gaps = 15/487 (3%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A LSL P L +P+ ++K V GG +V+A+ ++G K + LF V+D
Sbjct: 1 MNTVALLSLAPQLLIKPSLTCFSRKGVGRYGGIKVYAVLRDDGAEFAKNNNLEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVN+ALEV R+DIQYCDWRAR D+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIKKGKFLDVNEALEVVRFDIQYCDWRARHDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQ-- 177
IGT++KELAELQ++LA+AH QVH+SE RV++ALDKLA+ME LVNDRLL S T
Sbjct: 121 IGTLRKELAELQQELAKAHNQVHLSETRVSSALDKLAHMETLVNDRLLPPDGASSTSTAQ 180
Query: 178 -TCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP-- 234
T PSTS + + K PR+ LNVSGPV+PYN LKNFW+PVAFS+DLKDDTM P
Sbjct: 181 PTSLVPSTSSTA-RVRAKKPPRRGLNVSGPVKPYNPSLKNFWYPVAFSSDLKDDTMVPIA 239
Query: 235 -----WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 289
WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS
Sbjct: 240 CFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 299
Query: 290 TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLL 349
T++ NV+I+SLPCFEQEGM+WIWPGD+PP ATIP LLPPSGF +HAEIVMELP+EHGLLL
Sbjct: 300 TKMLNVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLPPSGFTVHAEIVMELPVEHGLLL 359
Query: 350 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 409
DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG
Sbjct: 360 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 419
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 469
ISKPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKHVP M LW HF
Sbjct: 420 ISKPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLLWSHF 479
Query: 470 AEQVLNE 476
AE+ E
Sbjct: 480 AEKACLE 486
>gi|226502977|ref|NP_001142071.1| uncharacterized protein LOC100274228 [Zea mays]
gi|194706992|gb|ACF87580.1| unknown [Zea mays]
Length = 440
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/435 (77%), Positives = 378/435 (86%), Gaps = 14/435 (3%)
Query: 100 MLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAH-RQVHISEARVATALDKLAYM 158
MLLH KVVEVLNPLAR++KSIGT++KELAELQ++L +AH +QVH+SEARV++ALDKLA+M
Sbjct: 1 MLLHSKVVEVLNPLAREFKSIGTLRKELAELQQELEKAHNQQVHLSEARVSSALDKLAHM 60
Query: 159 EALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFW 218
E LV+ + TS + AS + ++ K K PR+ L+VSGPV+PYN LKNFW
Sbjct: 61 ETLVSAPSTAEPPTSSSLSATASSTARVRA----KNKQPRRRLDVSGPVKPYNPSLKNFW 116
Query: 219 FPVAFSTDLK-DDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
+PVAFS+DLK DTM P WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQ
Sbjct: 117 YPVAFSSDLKAPDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQ 176
Query: 271 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 330
CPYHGWEYSTDGKCEKMPST++ +V+I+SLPCFEQEGM+WIWPGD+PP ATIP LLPPSG
Sbjct: 177 CPYHGWEYSTDGKCEKMPSTKMLDVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLPPSG 236
Query: 331 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 390
F +HAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD
Sbjct: 237 FTVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 296
Query: 391 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 450
PYPIDMEFRPPCMVLSTIGISKPGKL+G++TRQC+THLHQLHVCLPSSR KTRLLYRMSL
Sbjct: 297 PYPIDMEFRPPCMVLSTIGISKPGKLQGKSTRQCSTHLHQLHVCLPSSRNKTRLLYRMSL 356
Query: 451 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 510
DFA LKHVP M LW HFAE+VLNEDLRLVLGQQE M +GANVWN PV YDKLG+RYRL
Sbjct: 357 DFAPWLKHVPLMHLLWSHFAEKVLNEDLRLVLGQQEGMIDGANVWNWPVSYDKLGIRYRL 416
Query: 511 WRDALEKGA-KQLPF 524
WRDA+E+GA +LPF
Sbjct: 417 WRDAVERGADDRLPF 431
>gi|168057848|ref|XP_001780924.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667637|gb|EDQ54262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 507
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/507 (60%), Positives = 374/507 (73%), Gaps = 23/507 (4%)
Query: 38 FGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVL 97
E D+++ +FDVEDPR K +DVN A E+ R D+ Y DW+ARQDVL
Sbjct: 1 MSESSSRKDQQAGIVRIFDVEDPRGASSSLKKGTIDVNTAWELLRQDVLYLDWKARQDVL 60
Query: 98 TIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAY 157
TI+ H+KVVEVLNPL RD KS+ T++ ELA LQE+L++AH QVH+SEARV L KL
Sbjct: 61 TIVHAHDKVVEVLNPLVRDVKSVETLRSELAGLQEELSKAHAQVHLSEARVEHTLRKLGE 120
Query: 158 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKL-------PR------KSLNVS 204
ME+L N +LLQ++ G ++ P + + G+ PR KSL VS
Sbjct: 121 MESLFNTKLLQNQ---GRERGSTVPKATSALQLALTGEAEADLSARPRTNTSRAKSLEVS 177
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRAC 257
GP+ PY +LKN+W+PVAFS D+ D TM P WVIFRGKDG PGCV+++CAHRAC
Sbjct: 178 GPIGPYPAQLKNYWYPVAFSADIDDKTMVPFNSFEEAWVIFRGKDGRPGCVRDSCAHRAC 237
Query: 258 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEP 317
PL LG V EGRIQCPYHGWEY+T GKCEKMPST+ N K+ SLPC EQ+GM+WIWPG+E
Sbjct: 238 PLSLGKVEEGRIQCPYHGWEYNTSGKCEKMPSTRFVNAKLDSLPCIEQDGMVWIWPGNET 297
Query: 318 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 377
P+ +PCL PPS + IHA+I MELP+EHGLL++NLLDLAHAPFTHT+TFAKGW VP+ VK
Sbjct: 298 PSTNLPCLNPPSHYTIHAQITMELPVEHGLLVENLLDLAHAPFTHTTTFAKGWDVPNFVK 357
Query: 378 FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPS 437
F TP + LQG WDPYPI MEF+PPCMVLSTIG+ KPGKL G + C THLHQLHVC+PS
Sbjct: 358 FRTPIAALQGTWDPYPIAMEFKPPCMVLSTIGLEKPGKLNGSDVEACPTHLHQLHVCMPS 417
Query: 438 SRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNL 497
S+ KTRLLYRM+LDFA LKHVPF++YLW+H A +VL EDLRLV GQQ+RM GANVWN+
Sbjct: 418 SKGKTRLLYRMALDFAPYLKHVPFIKYLWQHLANKVLGEDLRLVEGQQDRMERGANVWNV 477
Query: 498 PVGYDKLGVRYRLWRDALEKGAKQLPF 524
PV YDKLGVRYR WR A+E G +++PF
Sbjct: 478 PVAYDKLGVRYRRWRIAIESGDERIPF 504
>gi|168050551|ref|XP_001777722.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670942|gb|EDQ57502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 562
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 304/489 (62%), Positives = 364/489 (74%), Gaps = 17/489 (3%)
Query: 54 LFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPL 113
F+VEDPR K DVN A E+ R D+ Y DW+AR+DVL I+ H+KVVEVLNPL
Sbjct: 72 FFNVEDPRGAGVSLKKGAFDVNTAWELLRQDVLYLDWKARRDVLAIVNAHDKVVEVLNPL 131
Query: 114 ARDYKSIGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTS 173
RD KS+ +++ ELA LQE+L++AH QVH+SEARV L KL ME+LVND+LLQ+ +
Sbjct: 132 VRDVKSVESLRSELAGLQEELSKAHAQVHLSEARVEHTLRKLGEMESLVNDKLLQNINPK 191
Query: 174 GTDQTCASPST------SKQSLDIV---KGKLPR-KSLNVSGPVQPYNTRLKNFWFPVAF 223
+ ST + DI +G R K L+VSGP+ PY +LKN W+P AF
Sbjct: 192 RGKTVPKAASTMEPVVMGEAEADISVRSRGSTSRGKPLDVSGPMGPYPAQLKNHWYPAAF 251
Query: 224 STDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGW 276
S D+ D TM P WVIFRGKDG PGCV+++CAHRACPL LG V +GRIQCPYHGW
Sbjct: 252 SADIDDKTMVPFDSFEEAWVIFRGKDGRPGCVRDSCAHRACPLSLGKVEDGRIQCPYHGW 311
Query: 277 EYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE 336
EY+T GKCEKMPST+L N ++ SLPC EQ+GM+WIWPG+E P+ +PCL PPS + IHA+
Sbjct: 312 EYNTSGKCEKMPSTRLVNAELDSLPCIEQDGMVWIWPGNETPSTNLPCLNPPSHYTIHAQ 371
Query: 337 IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM 396
I MELP+EHGLL++NLLDLAHAPFTHT+TFAKGW VPS VKF TP + L G WDPYPI M
Sbjct: 372 ITMELPVEHGLLVENLLDLAHAPFTHTTTFAKGWEVPSFVKFRTPIAALSGTWDPYPIAM 431
Query: 397 EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVL 456
EF+PPCMVLSTIG+ KPGKL G + C THLHQLHVC+PSS+ KTRLLYRM+LDFA L
Sbjct: 432 EFKPPCMVLSTIGLEKPGKLNGTDVDACPTHLHQLHVCMPSSKGKTRLLYRMALDFAPYL 491
Query: 457 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 516
KHVPF++YLW+H A +VL EDLRLV GQQ+RM GANVWNLPV YDKLGVRYR WR LE
Sbjct: 492 KHVPFIKYLWQHLANKVLGEDLRLVEGQQDRMERGANVWNLPVAYDKLGVRYRRWRVDLE 551
Query: 517 KGAKQLPFM 525
G ++ PFM
Sbjct: 552 SGDEKTPFM 560
>gi|302817640|ref|XP_002990495.1| hypothetical protein SELMODRAFT_131716 [Selaginella moellendorffii]
gi|300141663|gb|EFJ08372.1| hypothetical protein SELMODRAFT_131716 [Selaginella moellendorffii]
Length = 491
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/457 (62%), Positives = 345/457 (75%), Gaps = 24/457 (5%)
Query: 69 GKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELA 128
+ +DVNQA E+ R+D+++ D RARQDVL I H+KVVEVLNPLAR+ KSI T+K+ELA
Sbjct: 17 SRVIDVNQAWELLRHDVEFLDLRARQDVLAIKDAHDKVVEVLNPLARETKSINTLKRELA 76
Query: 129 ELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCASPSTSKQS 188
LQEDL +AH QVHISEARV L KLA ME +VND LLQ + T + A+ S SK
Sbjct: 77 NLQEDLQRAHAQVHISEARVNHTLSKLAEMETMVNDELLQKDEAAVTVRKNATSSKSK-- 134
Query: 189 LDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFR 239
LN++GPV+ Y +KN+W+PVAFS L D+ +P WV+FR
Sbjct: 135 -----------GLNIAGPVKRYPAEMKNYWYPVAFSACL--DSEKPLAIEIFEKNWVLFR 181
Query: 240 GKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKS 299
GKDG GC+ + CAHRACPL LG VN+G +QCPYHGWEY+T G CEKMPST+ K+KS
Sbjct: 182 GKDGRAGCIHDACAHRACPLSLGKVNDGCLQCPYHGWEYATSGSCEKMPSTRFVPTKVKS 241
Query: 300 LPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 359
+PC E++G++WIWPG P + IP LLPP F +HAEI+++L +EHGLL++NLLDLAHAP
Sbjct: 242 MPCIEKDGLVWIWPGSATPESDIPSLLPPENFTLHAEIILDLEVEHGLLMENLLDLAHAP 301
Query: 360 FTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 419
FTHT+TFAKGWSVPS VKF TP L+GYWDPYPIDMEFR PCMVLSTIG++KPGKLEG
Sbjct: 302 FTHTTTFAKGWSVPSSVKFKTPVETLRGYWDPYPIDMEFRRPCMVLSTIGLAKPGKLEGS 361
Query: 420 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 479
+T+ C HLHQLHVC+PS+R KTRLLYRMSLDFA LK+VPF+Q LW H A +VL+EDLR
Sbjct: 362 DTQSCKNHLHQLHVCIPSTRGKTRLLYRMSLDFAPWLKYVPFIQTLWVHLARKVLDEDLR 421
Query: 480 LVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 516
LV GQQERM GANVWNLPV YDKLGVRYR WR + E
Sbjct: 422 LVEGQQERMVRGANVWNLPVPYDKLGVRYRKWRVSCE 458
>gi|5478797|dbj|BAA82479.1| chlorophyll b synthase [Oryza sativa]
Length = 356
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 286/341 (83%), Positives = 311/341 (91%), Gaps = 7/341 (2%)
Query: 191 IVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP-------WVIFRGKDG 243
+V K PR+SLNVSGPVQPYN LKNFW+PVAFS+DLKDDTM P WVIFRGKDG
Sbjct: 8 VVNKKPPRRSLNVSGPVQPYNPSLKNFWYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDG 67
Query: 244 IPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF 303
PGCV NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST++ NV+I+SLPCF
Sbjct: 68 RPGCVMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLNVRIRSLPCF 127
Query: 304 EQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 363
EQEGM+WIWPG++PP +TIP LLPPSGF IHAEIVMELP+EHGLLLDNLLDLAHAPFTHT
Sbjct: 128 EQEGMVWIWPGNDPPKSTIPSLLPPSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHT 187
Query: 364 STFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 423
STFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+Q
Sbjct: 188 STFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQ 247
Query: 424 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 483
C+THLHQLH+CLPSSR KTRLLYRMSLDFA +KHVPFM LW HFAE+VLNEDLRLVLG
Sbjct: 248 CSTHLHQLHICLPSSRNKTRLLYRMSLDFAPWIKHVPFMHILWSHFAEKVLNEDLRLVLG 307
Query: 484 QQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
QQERM NGANVWN PV YDKLG+RYRLWRDA+E+G +LPF
Sbjct: 308 QQERMINGANVWNWPVSYDKLGIRYRLWRDAIERGVDRLPF 348
>gi|302804017|ref|XP_002983761.1| hypothetical protein SELMODRAFT_118803 [Selaginella moellendorffii]
gi|300148598|gb|EFJ15257.1| hypothetical protein SELMODRAFT_118803 [Selaginella moellendorffii]
Length = 481
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 286/457 (62%), Positives = 345/457 (75%), Gaps = 24/457 (5%)
Query: 69 GKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELA 128
+ +DVNQA E+ R+D+++ D RARQDVL I H+KVVEVLNPLAR+ KSI T+K+ELA
Sbjct: 17 SRVIDVNQAWELLRHDVEFLDLRARQDVLAIKDAHDKVVEVLNPLARETKSINTLKRELA 76
Query: 129 ELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCASPSTSKQS 188
LQEDL +AH QVHISEARV + KLA ME +VND LLQ + T + A+ S SK
Sbjct: 77 NLQEDLQRAHAQVHISEARVNHTISKLAEMETMVNDELLQKDEEAVTVRKNATSSKSK-- 134
Query: 189 LDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFR 239
LN++GPV+ Y +KN+W+PVAFS L D+ +P WV+FR
Sbjct: 135 -----------GLNIAGPVKRYPAEMKNYWYPVAFSACL--DSEKPLAIEIFEKNWVLFR 181
Query: 240 GKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKS 299
GKDG GC+ + CAHRACPL LG VN+G +QCPYHGWEY+T G CEKMPST+ K+KS
Sbjct: 182 GKDGRAGCIHDACAHRACPLSLGKVNDGCLQCPYHGWEYATSGSCEKMPSTRFVPTKVKS 241
Query: 300 LPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 359
+PC E++G++WIWPG P + IP LLPP F +HAEI+++L +EHGLL++NLLDLAHAP
Sbjct: 242 MPCIEKDGLVWIWPGSATPESDIPSLLPPDNFTLHAEIILDLEVEHGLLMENLLDLAHAP 301
Query: 360 FTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 419
FTHT+TFAKGWSVPS VKF TP L+GYWDPYPIDMEFR PCMVLSTIG++KPGKLEG
Sbjct: 302 FTHTTTFAKGWSVPSSVKFQTPVETLRGYWDPYPIDMEFRRPCMVLSTIGLAKPGKLEGS 361
Query: 420 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 479
+T+ C HLHQLHVC+PS+R KTRLLYRMSLDFA LK+VPF+Q LW H A +VL+EDLR
Sbjct: 362 DTQSCKNHLHQLHVCIPSTRGKTRLLYRMSLDFAPWLKYVPFIQTLWVHLARKVLDEDLR 421
Query: 480 LVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 516
LV GQQERM GANVWNLPV YDKLGVRYR WR + E
Sbjct: 422 LVEGQQERMVRGANVWNLPVPYDKLGVRYRKWRVSCE 458
>gi|42571759|ref|NP_973970.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
gi|332193915|gb|AEE32036.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
Length = 433
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 274/384 (71%), Positives = 317/384 (82%), Gaps = 9/384 (2%)
Query: 2 TAIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
A+ + +ALSLPIS R + ++ KK V+G FRVFA+FG+E GLV+KKS W LFDVED
Sbjct: 3 AAVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVED 62
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
PRSK P KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLNPLAR+YKS
Sbjct: 63 PRSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKS 122
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL R + D+
Sbjct: 123 IGTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDKPS 182
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------- 232
+S + S LD K KSLNVSGPV PY+ LKNFW+PVAF+ DLK DTM
Sbjct: 183 SSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFE 242
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 243 QPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKL 302
Query: 293 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 352
VKIKSLPC EQEGMIWIWPGDEPP +P L PPSGF IHAE+VM+LP+EHGLLLDNL
Sbjct: 303 LKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNL 362
Query: 353 LDLAHAPFTHTSTFAKGWSVPSLV 376
LDLAHAPFTHTSTFAKGWSVP +
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPRFL 386
>gi|148906570|gb|ABR16437.1| unknown [Picea sitchensis]
Length = 303
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/292 (80%), Positives = 265/292 (90%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
EPWVIFRGKD GCVQNTCAHRACPLHLGSV +GRIQCPYHGWEY+TDG CEKMPST L
Sbjct: 9 EPWVIFRGKDSRAGCVQNTCAHRACPLHLGSVTDGRIQCPYHGWEYATDGVCEKMPSTHL 68
Query: 293 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 352
NV IK+LPC EQ+G+IW+WPG+E P A +P L PPSGF IHA+IVMELP+EHGLLLDNL
Sbjct: 69 LNVHIKALPCVEQDGLIWVWPGNEIPDAPLPSLAPPSGFNIHAQIVMELPVEHGLLLDNL 128
Query: 353 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
LDLAHAPFTHTSTFAKGW +PS VKF+TPA+GLQGYWDPYPIDMEF PPCMVLSTIGISK
Sbjct: 129 LDLAHAPFTHTSTFAKGWEIPSFVKFMTPAAGLQGYWDPYPIDMEFCPPCMVLSTIGISK 188
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
PGK+EG++T+ C+THLHQLHVC+PSSR+KTRLLYRMSLDFA +LKH+PFM LWRHFA++
Sbjct: 189 PGKIEGRSTQNCSTHLHQLHVCIPSSRQKTRLLYRMSLDFAPLLKHIPFMHILWRHFADK 248
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
VLNEDLRLV+GQQ+RM GANVWNLPV YDKLG+RYR+WR+A+E G KQLPF
Sbjct: 249 VLNEDLRLVIGQQDRMVRGANVWNLPVSYDKLGIRYRIWRNAVEDGQKQLPF 300
>gi|357438661|ref|XP_003589607.1| Chlorophyllide a oxygenase, partial [Medicago truncatula]
gi|355478655|gb|AES59858.1| Chlorophyllide a oxygenase, partial [Medicago truncatula]
Length = 575
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/295 (81%), Positives = 262/295 (88%), Gaps = 11/295 (3%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG--------RIQCP---YHGWEYSTD 281
EPWVIFRGKDG PGCVQNTCAHRACPL G +++ P GWEY+TD
Sbjct: 281 EPWVIFRGKDGKPGCVQNTCAHRACPLPPWFCKRGSYRIAPTTKLKLPNGWISGWEYTTD 340
Query: 282 GKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMEL 341
GKCEKMPST++ NVKIKS+PCFE+EGMIWIWPG +PP AT+P LLPPSGF +HAEIVMEL
Sbjct: 341 GKCEKMPSTRMLNVKIKSIPCFEKEGMIWIWPGSDPPAATLPSLLPPSGFIVHAEIVMEL 400
Query: 342 PIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPP 401
P+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS V FLTPASGLQGYWDPYPIDMEFRPP
Sbjct: 401 PVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVNFLTPASGLQGYWDPYPIDMEFRPP 460
Query: 402 CMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF 461
CMVLSTIGISKPGKLEGQ+T++C+THLHQLHVCLPSS+ KTRLLYRMSLDFA +LKH+PF
Sbjct: 461 CMVLSTIGISKPGKLEGQSTKECSTHLHQLHVCLPSSKDKTRLLYRMSLDFAPLLKHMPF 520
Query: 462 MQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 516
M++LWRHFAEQVLNEDLRLV+GQQERMN GANVWN+PV YDKLGVRYRLWRDALE
Sbjct: 521 MEHLWRHFAEQVLNEDLRLVVGQQERMNKGANVWNVPVTYDKLGVRYRLWRDALE 575
>gi|238767622|dbj|BAH66650.1| chlorophyllide a oxygenase [Klebsormidium flaccidum]
Length = 322
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 199/311 (63%), Positives = 240/311 (77%), Gaps = 8/311 (2%)
Query: 219 FPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
+PVAFS ++ TM EPWVIFR +DG GC+++ CAHRACPL LG++ +G++QC
Sbjct: 1 YPVAFSENVDSKTMVPIDCFNEPWVIFRDQDGKAGCIRDECAHRACPLSLGALVDGKVQC 60
Query: 272 PYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGF 331
PYHGWEY+T G+C MPST +++LPC EQ+GMIWIWPGD+ P AT+P L PPSG+
Sbjct: 61 PYHGWEYTTSGECTHMPSTVQAPTSVRALPCVEQDGMIWIWPGDKVPEATLPDLSPPSGY 120
Query: 332 EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT-PASGLQGYWD 390
IHA+I +E+P+EHGLL++NLLDLAHAPFTHT+TFAKGW VP+ VKF T A+ L G+WD
Sbjct: 121 TIHAQITLEVPVEHGLLVENLLDLAHAPFTHTTTFAKGWPVPNSVKFKTAAAAALSGFWD 180
Query: 391 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 450
PYPIDMEFRPPCMV STIG+S+PGKL G NT+ C HLHQLHVC+PS TRLLYRMSL
Sbjct: 181 PYPIDMEFRPPCMVFSTIGLSQPGKLSGTNTKDCPNHLHQLHVCVPSKTGTTRLLYRMSL 240
Query: 451 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 510
DFA K+VPF+ LW + A QVL+EDLRLV GQQ+RM GANVWN PV YDKLGVRYR
Sbjct: 241 DFAWWAKYVPFIHKLWEYMANQVLSEDLRLVEGQQDRMIRGANVWNHPVAYDKLGVRYRR 300
Query: 511 WRDALEKGAKQ 521
WR E +
Sbjct: 301 WRQQQEDSTSR 311
>gi|253787589|dbj|BAH84854.1| putative chlorophyllide a oxygenase, partial [Cucumis sativus]
Length = 235
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/235 (87%), Positives = 225/235 (95%)
Query: 252 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWI 311
CAHRACPLHLGSVN+GR+QCPYHGWEYSTDGKCEKMPST+L NVKIKSLPCFE+EGMIW+
Sbjct: 1 CAHRACPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWV 60
Query: 312 WPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 371
WPG++PP A +P L PP GF+IHAE+V+E+P+EHGLLLDNLLDLAHAPFTHTSTFAKGWS
Sbjct: 61 WPGNDPPAANLPSLKPPPGFQIHAELVIEIPVEHGLLLDNLLDLAHAPFTHTSTFAKGWS 120
Query: 372 VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 431
VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ+TR+C+THLHQL
Sbjct: 121 VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECSTHLHQL 180
Query: 432 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 486
HVCLPS+R+KTRLLYRMSLDFA VLK +PFM YLWRHFAEQVLNEDLR VLGQQE
Sbjct: 181 HVCLPSTRQKTRLLYRMSLDFAPVLKQIPFMHYLWRHFAEQVLNEDLRFVLGQQE 235
>gi|159463890|ref|XP_001690175.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
gi|115311321|sp|Q9ZWM5.2|CAO_CHLRE RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|61742126|gb|AAX54904.1| chloroplast chlorophyllide a oxygenase precursor [Chlamydomonas
reinhardtii]
gi|158284163|gb|EDP09913.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
Length = 645
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/488 (43%), Positives = 288/488 (59%), Gaps = 62/488 (12%)
Query: 89 DWRARQDVLTIMLLHE----KVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHIS 144
++ RQD + + E KV E L+ AR+ ++G ++ +L L+ +AQA ++ ++
Sbjct: 125 EYVTRQDAAATLAMIEEANRKVEESLSEEAREKTAVGDLRDQLESLRAQVAQAQERLAMT 184
Query: 145 EARVATALDKLAYM--EALVNDRLLQDRHTSGTDQTCASPST------------------ 184
++RV L ++ + EA +R+ + ++ + ST
Sbjct: 185 QSRVEQNLQRVNELKAEATTLERMRKASDLDIKERERIAISTVAAKGPASSSSSAAAVSA 244
Query: 185 ---------SKQSLDIVKGKLPRKSLNVSGPVQPYNTR------------------LKNF 217
+ + V ++P S P ++ L+NF
Sbjct: 245 PATSATLTVERPAATTVTQEVPSTSYGTPVDRAPRRSKAAIRRSRGLESSMEIEEGLRNF 304
Query: 218 WFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P FS L DT+ EPWV+FR + G P C+++ CAHR CPL LG V EG++
Sbjct: 305 WYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQPSCIRDECAHRGCPLSLGKVVEGQVM 364
Query: 271 CPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL-PP 328
CPYHGWE++ DG C KMPST RNV + +LPC E++G IW+WPGD P T+P PP
Sbjct: 365 CPYHGWEFNGDGACTKMPSTPFCRNVGVAALPCAEKDGFIWVWPGDGLPAETLPDFAQPP 424
Query: 329 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY 388
GF IHAEI++++P+EHGLL++NLLDLAHAPFTHTSTFA+GW VP VKF L G+
Sbjct: 425 EGFLIHAEIMVDVPVEHGLLIENLLDLAHAPFTHTSTFARGWPVPDFVKFHA-NKALSGF 483
Query: 389 WDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYR 447
WDPYPIDM F+PPCM LSTIG+++PGK + G QC HLHQLHVC+PS + TRLLYR
Sbjct: 484 WDPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKKGHTRLLYR 543
Query: 448 MSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVR 507
MSLDF ++HVPF+ +W+ A QVL EDL LVLGQQ+RM G + W+ P YDKL VR
Sbjct: 544 MSLDFLPWMRHVPFIDRIWKQVAAQVLGEDLVLVLGQQDRMLRGGSNWSNPAPYDKLAVR 603
Query: 508 YRLWRDAL 515
YR WR+ +
Sbjct: 604 YRRWRNGV 611
>gi|5478799|dbj|BAA82480.1| chlorophyll b synthase [Marchantia polymorpha]
Length = 282
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 185/268 (69%), Positives = 218/268 (81%), Gaps = 1/268 (0%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
EPWV+FRGKDG GCV++ CAHRACPL LG+V +GRIQCPYHGWEY+T GKCEKMPST+
Sbjct: 16 EPWVLFRGKDGRAGCVRDECAHRACPLSLGTVVDGRIQCPYHGWEYNTGGKCEKMPSTRP 75
Query: 293 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 352
I++LPC EQ+GM+WIWPGDE P AT+P LLPP + IHAEIV+ELP+EHGLL++NL
Sbjct: 76 LKTGIRALPCIEQDGMVWIWPGDETPAATLPSLLPPENYTIHAEIVLELPVEHGLLMENL 135
Query: 353 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
LDLAHAPFTHTSTFAKGWSVP++VKF TP L G WDPYPIDM F+PPCMVLSTIG+ K
Sbjct: 136 LDLAHAPFTHTSTFAKGWSVPNMVKFKTPMQALSGNWDPYPIDMAFQPPCMVLSTIGLVK 195
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
PGKL+G +T C+ HLHQLHVC+PSSR KTRL+YR + + +P++ +W H A Q
Sbjct: 196 PGKLDGSSTASCSKHLHQLHVCMPSSRGKTRLMYRWLWTLPNG-RSMPYIDRVWTHLANQ 254
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVG 500
VLNEDLRLV GQQ+RM GANVW PVG
Sbjct: 255 VLNEDLRLVEGQQDRMKRGANVWQTPVG 282
>gi|302844701|ref|XP_002953890.1| chlorophyll a oxygenase [Volvox carteri f. nagariensis]
gi|300260702|gb|EFJ44919.1| chlorophyll a oxygenase [Volvox carteri f. nagariensis]
Length = 657
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/496 (42%), Positives = 296/496 (59%), Gaps = 77/496 (15%)
Query: 89 DWRARQDVLTIMLLHE----KVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHIS 144
++ +QD + + E KV E L+ AR+ ++G ++++L LQ + +A ++ ++
Sbjct: 134 EYVTKQDAAATLAMIEEANRKVEEALSEEARERTAVGDLREQLQVLQRQVQEAQERLQLT 193
Query: 145 EARVATALDKLAYMEA-------LVNDRLLQDR--------------------------- 170
+ARV L+++ ++A + N R+ DR
Sbjct: 194 QARVEQNLNRVNELKAEAVGLERMRNGRMGGDRKKELQVAAPVAVTAAASAARPAVSATA 253
Query: 171 ---------------------HTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQP 209
+ S + +P + + I +G+ SL+
Sbjct: 254 VAESVPAAIVTVEPPTRSYTPNGSSDGTSVVAPPGRRSKVAIRRGRGLESSLD------- 306
Query: 210 YNTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG 262
+ L+NFW+P FS L DT+ EPWV+FR + G P C+++ CAHRACPL LG
Sbjct: 307 FEPGLRNFWYPAEFSAKLGQDTLVPFELFGEPWVLFRDEKGQPACIKDECAHRACPLSLG 366
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPST-QLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
V EG++ C YHGWE++ DG C KMPST RNV + +LPC E++G IW+WPGD P T
Sbjct: 367 KVVEGQVVCAYHGWEFNGDGHCTKMPSTPHCRNVGVSALPCAEKDGFIWVWPGDGLPAQT 426
Query: 322 IPCLL-PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 380
+P PP GF++HAEI++++P+EHGLL++NLLDLAHAPFTHT+TFA+GW VP VKF T
Sbjct: 427 LPDFARPPEGFQVHAEIMVDVPVEHGLLMENLLDLAHAPFTHTTTFARGWPVPDFVKFHT 486
Query: 381 PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQNTRQCATHLHQLHVCLPSSR 439
L GYWDPYPIDM F+PPCMVLSTIG+++PGK + G QC HLHQLHVC+PS +
Sbjct: 487 -NKLLSGYWDPYPIDMAFQPPCMVLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKK 545
Query: 440 KKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPV 499
TRLLYRMSLDF +++VPF+ +W++ A QVL EDL LVLGQQ+R+ G N W+ P
Sbjct: 546 GHTRLLYRMSLDFLPWMRYVPFIDKVWKNVAGQVLGEDLVLVLGQQDRLLRGGNTWSNPA 605
Query: 500 GYDKLGVRYRLWRDAL 515
YDKL VRYR WR+++
Sbjct: 606 PYDKLAVRYRRWRNSV 621
>gi|3786324|dbj|BAA33964.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
Length = 463
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/312 (58%), Positives = 225/312 (72%), Gaps = 11/312 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+NFW+P FS L DT+ EPWV+FR + G P +++ CAHR CPL LG V E
Sbjct: 119 LRNFWYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQPSYIRDECAHRGCPLSLGKVVE 178
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
G++ CPYHGWE++ DG C KMPST RNV + +LPC E++G IW+WPGD P T+P
Sbjct: 179 GQVMCPYHGWEFNGDGACTKMPSTPFCRNVGVAALPCAEKDGFIWVWPGDGLPAETLPDF 238
Query: 326 L-PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
PP GF IHAEI++++P+EHGLL++NLLDLAHAPFTHTSTFA+GW VP VKF
Sbjct: 239 AQPPEGFLIHAEIMVDVPVEHGLLIENLLDLAHAPFTHTSTFARGWPVPDFVKFHA-NKA 297
Query: 385 LQGYWDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQNTRQCATHLHQLHVCLPSSRKKTR 443
L G+WDPYPIDM F+PPCM LSTIG+++PGK + G QC HLHQLHVC+PS + TR
Sbjct: 298 LSGFWDPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKKGHTR 357
Query: 444 LLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDK 503
LLYRMSLDF ++HVPF+ +W+ A QVL EDL LVLGQQ+RM G + W+ P YDK
Sbjct: 358 LLYRMSLDFLPWMRHVPFIDRIWKQVAAQVLGEDLVLVLGQQDRMLRGGSNWSNPAPYDK 417
Query: 504 LGVRYRLWRDAL 515
L VRYR WR+ +
Sbjct: 418 LAVRYRRWRNGV 429
>gi|384246692|gb|EIE20181.1| PaO-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 370
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/319 (57%), Positives = 229/319 (71%), Gaps = 12/319 (3%)
Query: 213 RLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
+L++FW+PVAFS+ LKD M +PWV+FR G+P CV++ CAHRACPL LGSV
Sbjct: 14 QLQDFWYPVAFSSQLKDGAMVTMELFGKPWVLFRDAQGLPSCVKDACAHRACPLSLGSVV 73
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP- 323
+G IQCPYHGW+Y G C KMPST + + + +LP E EG +W+WPG P +P
Sbjct: 74 DGCIQCPYHGWQYDGSGNCTKMPSTAFCKGITVSTLPVSESEGFVWVWPGRSVPEHNVPQ 133
Query: 324 -CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
PP GF +HAE+++E+P+EHGLLL+NLLDLAHAPFTHTSTFAKGW VP +VKF A
Sbjct: 134 HVTRPPDGFTVHAELILEVPVEHGLLLENLLDLAHAPFTHTSTFAKGWPVPDVVKF-NAA 192
Query: 383 SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKK 441
L G W+PYPIDM F PPCMVLSTIG+++PGK+E G C HLHQLHVCLP+ +
Sbjct: 193 RMLGGNWEPYPIDMAFEPPCMVLSTIGLAQPGKIERGARAASCKNHLHQLHVCLPAGPGR 252
Query: 442 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGY 501
TRLLYRMS+DF K VP +Q W H A+QV+ EDL LV GQQ+RM GA+VW PV Y
Sbjct: 253 TRLLYRMSMDFLQWTKAVPGIQAFWAHIAKQVMGEDLVLVAGQQDRMLRGADVWANPVAY 312
Query: 502 DKLGVRYRLWRDALEKGAK 520
DKLGVRYR WR+++ G+
Sbjct: 313 DKLGVRYRRWRNSVAAGSS 331
>gi|238767620|dbj|BAH66649.1| chlorophyllide a oxygenase [Mesostigma viride]
Length = 299
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 165/282 (58%), Positives = 211/282 (74%), Gaps = 2/282 (0%)
Query: 241 KDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR-NVKIKS 299
+DG C+++ CAHRACPL LG+V G CPYHGW+Y TDGKC KMP T+LR V++ +
Sbjct: 2 EDGRVACLRDECAHRACPLSLGTVENGHATCPYHGWQYDTDGKCTKMPQTRLRAQVRVST 61
Query: 300 LPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 359
LP E +GMIW++PG P +P LPPS F +HAE+V+E+PIEHGL+++NLLDLAHAP
Sbjct: 62 LPVREHDGMIWVYPGSNEPPEHLPSFLPPSNFTVHAELVLEVPIEHGLMIENLLDLAHAP 121
Query: 360 FTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE-G 418
FTHT TFAKGWSVP V F A L G+W+PYPI M+F PPCM +S IG++KPG+LE G
Sbjct: 122 FTHTETFAKGWSVPDSVNFKVAAQSLAGHWEPYPISMKFEPPCMTISEIGLAKPGQLEAG 181
Query: 419 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 478
+ + +C HLHQLHVC+P+ +TR+LYRM LDFA +K++P +Q +W A QVL EDL
Sbjct: 182 KFSGECKQHLHQLHVCMPAGEGRTRILYRMCLDFAHWVKYIPGIQNVWSGMATQVLGEDL 241
Query: 479 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAK 520
RLV GQQ+RM GA++W PV YDKLGVRYR WR A+E+ +
Sbjct: 242 RLVEGQQDRMLRGADIWYNPVAYDKLGVRYRSWRRAVERNTR 283
>gi|307103693|gb|EFN51951.1| hypothetical protein CHLNCDRAFT_54799 [Chlorella variabilis]
Length = 683
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 174/320 (54%), Positives = 217/320 (67%), Gaps = 11/320 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LKN WF VAF + L + P WV+FR +G P CV + CAHR CPL LG V +
Sbjct: 327 LKNHWFAVAFVSKLGPEDKVPFELFGQAWVLFRDSEGRPACVLDECAHRGCPLSLGQVVD 386
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
G + CPYHGW ++ G+C KMPST L R V + +LPC EQ+G +W+WPG E PT +P +
Sbjct: 387 GNLVCPYHGWRFNGKGECTKMPSTNLCRGVAVSALPCAEQDGFVWVWPGWEEPTLPLPAV 446
Query: 326 L-PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
PP+G+ IHAEI +E+P+EHGLL++NLLDLAHAPFTHTSTFA+GW VP VKF +
Sbjct: 447 TRPPAGYRIHAEIEVEVPVEHGLLVENLLDLAHAPFTHTSTFARGWPVPDAVKFHA-SRL 505
Query: 385 LQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTR 443
L G WDPYPI+M F PPCM LS +G+++PGK G + C HLHQLHVCLPS TR
Sbjct: 506 LGGNWDPYPIEMSFNPPCMTLSHVGLARPGKAGVGATPQDCQNHLHQLHVCLPSRAGHTR 565
Query: 444 LLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDK 503
LLYRM+ DF + +P +Q+ WR+ A QVL EDL LVLGQQ+R+ G + W PV YDK
Sbjct: 566 LLYRMATDFLWWTELLPGIQHFWRYIAGQVLGEDLVLVLGQQDRLLRGGDTWRHPVSYDK 625
Query: 504 LGVRYRLWRDALEKGAKQLP 523
L VRYR WR++L P
Sbjct: 626 LAVRYRRWRNSLSLNGGAAP 645
>gi|75215802|sp|Q9XJ38.1|CAO_DUNSA RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|5478801|dbj|BAA82481.1| chlorophyll b synthase [Dunaliella salina]
Length = 463
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 196/445 (44%), Positives = 264/445 (59%), Gaps = 51/445 (11%)
Query: 123 MKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEA----LVNDRL------------ 166
M+ +L LQ+++++A ++ SEARVA L ++ ++A L RL
Sbjct: 1 MQSKLLGLQDEISEARDKLRTSEARVAQNLKRVDELKAEAASLERMRLASSSSTDSTVSI 60
Query: 167 ----------------------LQDR-HTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNV 203
+Q R SG T + S + +G P+ S +
Sbjct: 61 ASRGGAAVAATTSVPDHVEREGIQSRVRGSGMASTSYPSHVPQPSQAVRRGPKPKDSRRL 120
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRA 256
++ L+NFW+P F+ L+ M P WV+FR + P C++++CAHRA
Sbjct: 121 RSSLE-LEDGLRNFWYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEHSAPTCIKDSCAHRA 179
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGD 315
CPL LG V G +QCPYHGWE+ G C KMPST++ V + +LPC E++G +W+WPGD
Sbjct: 180 CPLSLGKVINGHVQCPYHGWEFDGSGACTKMPSTRMCHGVGVAALPCVEKDGFVWVWPGD 239
Query: 316 EPPTATIPCLL-PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 374
PP P PP+G+++HAEI++++P+EHGLL++NLLDLAHAPFTHT+TFA+GW +P
Sbjct: 240 GPPPDLPPDFTAPPAGYDVHAEIMVDVPVEHGLLMENLLDLAHAPFTHTTTFARGWPIPE 299
Query: 375 LVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQNTRQCATHLHQLHV 433
V+F L G WDPYPI M F PPC+ LSTIG+S+PGK + G +C HLHQLHV
Sbjct: 300 AVRFHA-TKMLAGDWDPYPISMSFNPPCIALSTIGLSQPGKIMRGYKAEECKRHLHQLHV 358
Query: 434 CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGAN 493
C+PS TRLLYRMSLDF KHVPF+ LW+ A QVL EDL LVLGQQ RM G +
Sbjct: 359 CMPSKEGHTRLLYRMSLDFWGWAKHVPFVDVLWKKIAGQVLGEDLVLVLGQQARMIGGDD 418
Query: 494 VWNLPVGYDKLGVRYRLWRDALEKG 518
W P+ YDKL VRYR WR+ + G
Sbjct: 419 TWCTPMPYDKLAVRYRRWRNMVADG 443
>gi|238767606|dbj|BAH66642.1| chlorophyllide a oxygenase [Pyramimonas parkeae]
Length = 338
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 170/312 (54%), Positives = 217/312 (69%), Gaps = 11/312 (3%)
Query: 220 PVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCP 272
P+ FS L ++T+ EPWV+FR +G C+Q+ CAHRACPL LGSV G + C
Sbjct: 1 PIEFSAQLVENTLIPLELFGEPWVLFRDAEGKAACLQDQCAHRACPLSLGSVQNGNVTCA 60
Query: 273 YHGWEYSTDGKCEKMPST-QLRNVKIKSLPCFEQEGMIWIWPG-DEPPTATIPCLLPPSG 330
YHGW+++ G CE+MPST +NV +K+L E++GMI+ W G D+ P IP L PP+G
Sbjct: 61 YHGWQFNGQGDCEEMPSTPHCKNVGVKALQVTEKDGMIFAWTGEDDEPDIPIPELAPPAG 120
Query: 331 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 390
F IH+EI ME+P+EHGLL++NLLDLAHAPFTHT+TFA+GW +P V+F L G WD
Sbjct: 121 FVIHSEITMEVPVEHGLLVENLLDLAHAPFTHTATFARGWPIPEAVRFHL-LDKLSGNWD 179
Query: 391 PYPIDMEFRPPCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMS 449
PYPIDM F PP M S IG+++PGK+E G +C HLHQLHVCLP+ TRLLYRMS
Sbjct: 180 PYPIDMAFLPPVMTESKIGLNQPGKIERGVRCDECDKHLHQLHVCLPAKEGHTRLLYRMS 239
Query: 450 LDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
LDF ++ +P +Q +W+ A QVL EDLRLVLGQQ+RM G + W+ PV YDKL VRYR
Sbjct: 240 LDFMGWVRFIPGIQRVWKEVANQVLGEDLRLVLGQQDRMKRGGHTWSFPVPYDKLAVRYR 299
Query: 510 LWRDALEKGAKQ 521
WR+ L + Q
Sbjct: 300 RWRNGLAESKGQ 311
>gi|38488613|dbj|BAD02269.1| chlorophyllide a oxygenase [Prochlorothrix hollandica]
Length = 366
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 179/336 (53%), Positives = 220/336 (65%), Gaps = 21/336 (6%)
Query: 198 RKSLNVSGPVQPYNTRLKNFWFPVAFSTDLK-DDTM------EPWVIFRGKDGIPGCVQN 250
SLNVS + N L+NFW+PV FS +L D + + WV+FR G C+ +
Sbjct: 2 NNSLNVSATLDLANG-LRNFWYPVEFSKNLGMADPLGFELFDQCWVLFRDDQGTAACILD 60
Query: 251 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIW 310
CAHRACPL LG V +GRIQCPYHGWEY G+C MPS Q + I +LP EQ GMIW
Sbjct: 61 ECAHRACPLSLGKVIQGRIQCPYHGWEYDRQGECVHMPSCQAISNPILTLPVMEQGGMIW 120
Query: 311 IWPGDEPPTATIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
+WPG + P A +P L P P F + AE+VM+L +EHGL+L+NLLDLAHAPFTHT TFAK
Sbjct: 121 VWPGTDEPGA-LPSLAPTLPDNFTLQAELVMDLEVEHGLMLENLLDLAHAPFTHTGTFAK 179
Query: 369 GWSVPSLVKFLTPASG-LQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 427
GW VP V+F A+ G+WDPYPI M F PPC V+STIG+ + C H
Sbjct: 180 GWPVPPFVRFANAATTPWTGHWDPYPIHMTFEPPCFVISTIGLRG---------KDCGRH 230
Query: 428 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQER 487
LHQ+H CLP + +TRLLYR++LDF L+ VP LW+H A +V+ EDLRLV GQQER
Sbjct: 231 LHQVHACLPRGQGRTRLLYRLALDFGHWLRWVPGTHCLWQHLANRVIQEDLRLVQGQQER 290
Query: 488 MNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLP 523
+ GANVWN PVGYDKLGV YR WR+ +E+ P
Sbjct: 291 LKGGANVWNQPVGYDKLGVAYRHWRNQVERHGSDWP 326
>gi|238767608|dbj|BAH66643.1| chlorophyllide a oxygenase [Prasinoderma coloniale]
Length = 304
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 169/297 (56%), Positives = 210/297 (70%), Gaps = 13/297 (4%)
Query: 239 RGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-QLRNVKI 297
R +G+ GCV+++CAHRACPL LG G++QCPYHGWE+ TDG+C K PST +L+N+++
Sbjct: 1 RDANGVAGCVRDSCAHRACPLSLGKNVGGKVQCPYHGWEFETDGRCTKTPSTNELKNIRV 60
Query: 298 KSLPCFEQEGMIWIWPGDEPPTA---TIPCLLPPSG-FEIHAEIVMELPIEHGLLLDNLL 353
++LP E++GMIW++PG+E P L PP F IHAEIV+ +P+EHGLL++NLL
Sbjct: 61 EALPVVERDGMIWVYPGEEDPPEDHQNFTALAPPGDEFTIHAEIVLTVPVEHGLLMENLL 120
Query: 354 DLAHAPFTHTSTFAKGWSVPSLVKFLTPAS-------GLQGYWDPYPIDMEFRPPCMVLS 406
DLAHAPFTHTSTFAKGWSVP V F T + GL G W PYPIDM F+PPCMVLS
Sbjct: 121 DLAHAPFTHTSTFAKGWSVPDRVDFKTVKNAVAQQIGGLGGEWQPYPIDMTFQPPCMVLS 180
Query: 407 TIGISKPGKLEGQN-TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL 465
IG+ KPG++E + C HLHQLHVCLP+ +TRLLYRMSLDFA K++PF+
Sbjct: 181 QIGLVKPGQVEAETRASDCDRHLHQLHVCLPAKDGETRLLYRMSLDFAKFAKNLPFVSEF 240
Query: 466 WRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQL 522
W A QVL EDL LV GQQ M G +VW+ PV YDKLGVRYR WR ++ G L
Sbjct: 241 WEELANQVLGEDLVLVEGQQRNMKAGMDVWSNPVAYDKLGVRYRRWRTGVQYGNPSL 297
>gi|413951241|gb|AFW83890.1| hypothetical protein ZEAMMB73_249573 [Zea mays]
Length = 290
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/284 (63%), Positives = 213/284 (75%), Gaps = 15/284 (5%)
Query: 6 TAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVEDPR 61
T A LSL P L +P+ ++K V GG +V+A+ ++G K + LF V+DP
Sbjct: 3 TVALLSLAPQLLIKPSLTCFSRKGVGRYGGIKVYAVLRDDGAEFAKNNNLEALFHVDDPG 62
Query: 62 SKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSIG 121
+VP KGKFLDVN+ALEV R+DIQYCDWRAR D+LTIM+LH KVVEVLNPLAR++KSIG
Sbjct: 63 PRVPIKKGKFLDVNEALEVVRFDIQYCDWRARHDLLTIMVLHNKVVEVLNPLAREFKSIG 122
Query: 122 TMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQ---T 178
T++KELAELQ++LA+AH QVH+SE RV++ALDKLA+ME LVNDRLL S T T
Sbjct: 123 TLRKELAELQQELAKAHNQVHLSETRVSSALDKLAHMETLVNDRLLPPDGASSTSTAQPT 182
Query: 179 CASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---- 234
PSTS + + K PR+ LNVSGPV+PYN LKNFW+PVAFS+DLKDDTM P
Sbjct: 183 SLVPSTSSTA-RVRAKKPPRRGLNVSGPVKPYNPSLKNFWYPVAFSSDLKDDTMVPIACF 241
Query: 235 ---WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHG 275
WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHG
Sbjct: 242 EEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHG 285
>gi|238767610|dbj|BAH66644.1| chlorophyllide a oxygenase [Picocystis salinarum]
Length = 318
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 209/291 (71%), Gaps = 13/291 (4%)
Query: 238 FRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP--STQLRNV 295
FR ++G CV + C HRACPL +G V +G I CPYHGWE + +G C MP + Q+
Sbjct: 1 FRDQEGKAVCVHDECPHRACPLSIGKVIDGNIACPYHGWEVNGEGVCVNMPQVTPQVEAG 60
Query: 296 K--IKSLPCFEQEGMIWIWPGDE----PPTATIPCLLPPS--GFEIHAEIVMELPIEHGL 347
+ ++ LPC E GMIWIW G++ PP + LLPP+ GF +HAEI M++P+EHGL
Sbjct: 61 RPCVQKLPCEEVGGMIWIWTGEDGIPIPPVESDR-LLPPTNKGFSLHAEIAMDVPVEHGL 119
Query: 348 LLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLS 406
L++NLLDLAHAPFTHTSTFAKGWSVP LV F T A+ L G W+PYPIDM F PPCM LS
Sbjct: 120 LIENLLDLAHAPFTHTSTFAKGWSVPDLVNFQTAAARALAGNWEPYPIDMSFEPPCMTLS 179
Query: 407 TIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL 465
TIG+++PGKLE G QC HLHQ+HVCLP+ K TRLLYRM LDF K+VP +Q L
Sbjct: 180 TIGLAQPGKLESGVRQSQCKNHLHQMHVCLPAGPKSTRLLYRMHLDFLGWAKNVPGIQKL 239
Query: 466 WRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 516
W + A QVL EDLRLVLGQQ+R+ G +VW PV YDKLGVRYR WR++L+
Sbjct: 240 WEYMAGQVLGEDLRLVLGQQDRLERGGDVWGHPVPYDKLGVRYRRWRNSLD 290
>gi|238767600|dbj|BAH66639.1| chlorophyllide a oxygenase [Nephroselmis pyriformis]
Length = 297
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 172/296 (58%), Positives = 214/296 (72%), Gaps = 14/296 (4%)
Query: 221 VAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPY 273
V F++ L D M P WV+FR +DG GC+++ CAHRACPL LG+V G+ C Y
Sbjct: 2 VEFTSRLGKDIMVPFECFEESWVLFRDEDGKAGCIKDECAHRACPLSLGTVENGQATCAY 61
Query: 274 HGWEYSTDGKCEKMPSTQLRN---VKIKSLPCFEQEGMIWIWPGDEPPTATIPC--LLPP 328
HGW++ST G+C K+PS R V ++++P EQ+GMIWIWPGDE P IP +LPP
Sbjct: 62 HGWQFSTGGECTKIPSVGARGCSGVGVRAMPTVEQDGMIWIWPGDEKPAEHIPSKEVLPP 121
Query: 329 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT-PASGLQG 387
+G +HAEIV+++P+EHGLLL+NLLDLAHAPFTHTSTFAKGW+VP LVKF T L G
Sbjct: 122 AGHTLHAEIVLDVPVEHGLLLENLLDLAHAPFTHTSTFAKGWAVPELVKFSTDKVRALGG 181
Query: 388 YWDPYPIDMEFRPPCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTRLLY 446
W+PYPIDM F PPCMVLSTIG+++PGK++ G +C HLHQLHVC+PS KTRLLY
Sbjct: 182 AWEPYPIDMSFEPPCMVLSTIGLAQPGKVDAGVRASECEKHLHQLHVCMPSGAGKTRLLY 241
Query: 447 RMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYD 502
RM LDF LK+VP M +W A QVL EDLRLVLGQQ+R+ G +VW+ P+ YD
Sbjct: 242 RMHLDFMPFLKYVPGMHLVWEAMANQVLGEDLRLVLGQQDRLQRGGDVWSNPMEYD 297
>gi|238767602|dbj|BAH66640.1| chlorophyllide a oxygenase [Nephroselmis pyriformis]
Length = 305
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/287 (58%), Positives = 208/287 (72%), Gaps = 8/287 (2%)
Query: 241 KDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN---VKI 297
+DG CV++ CAHRACPL LG+V G+ C YHGW++ DG C ++PS R + I
Sbjct: 2 EDGTAACVKDECAHRACPLSLGTVEGGKATCAYHGWKFGGDGACTEIPSVGSRGAAGISI 61
Query: 298 KSLPCFEQEGMIWIWPGDEPPTATIP-CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLA 356
+SLP E +G++W+WPG P A IP L P GF +HAEIV+++P+EHGLLL+NLLDLA
Sbjct: 62 RSLPVQEVDGLVWVWPGSAEPAAEIPRDLRVPEGFTLHAEIVLDVPVEHGLLLENLLDLA 121
Query: 357 HAPFTHTSTFAKGWSVPSLVKFLT-PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 415
HAPFTHTSTFAKGW+VP LVKF T L G WDPYPIDM F PPC VLS IG+ KPG+
Sbjct: 122 HAPFTHTSTFAKGWAVPDLVKFSTDKMRTLGGAWDPYPIDMSFEPPCHVLSLIGLEKPGE 181
Query: 416 L-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
+ G +C HLHQLHVCLPS +TRLLYRMSLDF +KHVP ++ +W A QVL
Sbjct: 182 VASGTRAGECERHLHQLHVCLPSREGQTRLLYRMSLDFLPWVKHVPGIKMVWEAMAAQVL 241
Query: 475 NEDLRLVLGQQERM-NNGANVWNLPVGYDKLGVRYRLWRDALEKGAK 520
EDLRLV GQQ+RM N GA +W P+GYD+LGV+YR+WR++L GAK
Sbjct: 242 GEDLRLVAGQQDRMVNEGAQIWGNPMGYDELGVKYRMWRNSL-AGAK 287
>gi|238767604|dbj|BAH66641.1| chlorophyllide a oxygenase [Pyramimonas parkeae]
Length = 264
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 151/263 (57%), Positives = 194/263 (73%), Gaps = 3/263 (1%)
Query: 242 DGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSL 300
DGI CV++ CAHRACPL LG V +G+++CPYHGW Y+ G+C KMPST+ + V +KSL
Sbjct: 3 DGIAACVKDECAHRACPLSLGQVVDGQVECPYHGWAYNRGGECTKMPSTRYCKGVGVKSL 62
Query: 301 PCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPF 360
EQ+G+IW+WPG PT +P P GF HAE+++++P+EHGLL++NLLDLAHAPF
Sbjct: 63 TVQEQDGLIWVWPGGAEPTTEVPRFHAPEGFTTHAELMLDVPVEHGLLIENLLDLAHAPF 122
Query: 361 THTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE-GQ 419
THTSTFAKGWS+P LV + L G WDPYPIDM F PC+ LSTIG+++PG++E G
Sbjct: 123 THTSTFAKGWSIPELVNIKMNGA-LVGNWDPYPIDMSFEAPCITLSTIGLARPGQVEKGL 181
Query: 420 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 479
C HL+Q+HVCLPS + TRLLYRM+LDF +++VPF+ +W+ A QVL EDLR
Sbjct: 182 RAEDCPKHLYQMHVCLPSKKGHTRLLYRMALDFMPWVQYVPFINSVWQQMANQVLGEDLR 241
Query: 480 LVLGQQERMNNGANVWNLPVGYD 502
LVLGQQERM G++ W PV YD
Sbjct: 242 LVLGQQERMAVGSDTWANPVSYD 264
>gi|357438645|ref|XP_003589598.1| Chlorophyllide a oxygenase, partial [Medicago truncatula]
gi|355478646|gb|AES59849.1| Chlorophyllide a oxygenase, partial [Medicago truncatula]
Length = 231
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/232 (69%), Positives = 193/232 (83%), Gaps = 5/232 (2%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
M AIATA+ALSLPI R +K++TK+ ++G F VFA+FGE DKKSAW +FDV+DP
Sbjct: 1 MNAIATASALSLPI-FCRTSKLDTKRGLKGKFGVFAVFGE----ADKKSAWGAIFDVQDP 55
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK P KGK LDV QA+EVAR+DI+Y DWRARQDVLTIMLLHEKVVEVLNPLAR++KSI
Sbjct: 56 RSKAPLSKGKVLDVFQAIEVARHDIEYLDWRARQDVLTIMLLHEKVVEVLNPLAREFKSI 115
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GTMKK+LA LQ++LA+AHRQVHISEARV+TALDKLAYME LVNDRLLQDR T+ +T +
Sbjct: 116 GTMKKDLAGLQDELAEAHRQVHISEARVSTALDKLAYMEELVNDRLLQDRSTAEVAETSS 175
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM 232
PSTS +S+ + + P+KSLNVSGPVQ Y+ LKNFW+PVAFS DLKDD+M
Sbjct: 176 PPSTSNKSVHTERRRKPKKSLNVSGPVQSYHPNLKNFWYPVAFSADLKDDSM 227
>gi|238006758|gb|ACR34414.1| unknown [Zea mays]
Length = 196
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 163/187 (87%), Positives = 174/187 (93%), Gaps = 1/187 (0%)
Query: 339 MELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEF 398
MELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEF
Sbjct: 1 MELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEF 60
Query: 399 RPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH 458
RPPCMVLSTIGISKPGKL+G++TRQC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKH
Sbjct: 61 RPPCMVLSTIGISKPGKLQGKSTRQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKH 120
Query: 459 VPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
VP M LW HFAE+VLNEDLRLVLGQQE M +GANVWN PV YDKLG+RYRLWRDA+E+G
Sbjct: 121 VPLMHLLWSHFAEKVLNEDLRLVLGQQEGMIDGANVWNWPVSYDKLGIRYRLWRDAVERG 180
Query: 519 A-KQLPF 524
A +LPF
Sbjct: 181 ADDRLPF 187
>gi|5478805|dbj|BAA82483.1| chlorophyll b synthase [Prochloron didemni]
Length = 276
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 182/269 (67%), Gaps = 13/269 (4%)
Query: 235 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN 294
W++FR ++ GC+ + CAHRAC L LG V GR+QC YHGWEY+T+G CE MPS +
Sbjct: 18 WILFRDRNSNIGCIHDRCAHRACTLSLGKVVNGRVQCAYHGWEYNTEGTCEVMPSCKQTK 77
Query: 295 VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNL 352
+K+LP EQ GMIW+WPG P +P L P P F + AEI MEL +EHGL ++NL
Sbjct: 78 AAVKALPAIEQSGMIWVWPGSGVP-GELPKLAPAIPENFTLQAEITMELDVEHGLFMENL 136
Query: 353 LDLAHAPFTHTSTFAKGWSVPSLVKFLT-PASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 411
LDLAHAPFTHT TFAKGW VP V+F P + L G+WDPYPIDM F PPC V+STIG+
Sbjct: 137 LDLAHAPFTHTGTFAKGWPVPDFVRFANLPKTPLTGHWDPYPIDMSFEPPCYVISTIGLR 196
Query: 412 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 471
R C HLHQ+HVCLP + KTRLLYR++LDF L+ VP M W H A+
Sbjct: 197 G---------RDCGRHLHQVHVCLPKGKGKTRLLYRLALDFYKWLRFVPGMNLFWEHMAQ 247
Query: 472 QVLNEDLRLVLGQQERMNNGANVWNLPVG 500
+V+ ED+RLV GQQ+ + G NVWN PVG
Sbjct: 248 RVIGEDIRLVRGQQKSLQEGGNVWNQPVG 276
>gi|5478803|dbj|BAA82482.1| chlorophyll b synthase [Prochlorothrix hollandica]
Length = 276
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/269 (56%), Positives = 183/269 (68%), Gaps = 13/269 (4%)
Query: 235 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN 294
WV+FR G C+ + CAHRACPL LG V +GRIQCPYHGWEY G+C MPS Q +
Sbjct: 18 WVLFRDDQGTAACILDECAHRACPLSLGKVIQGRIQCPYHGWEYDRQGECVHMPSCQAIS 77
Query: 295 VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNL 352
I +LP EQ GMIW+WPG + P A +P L P P F + AE+VM+L +EHGL+L+NL
Sbjct: 78 NPILTLPVMEQGGMIWVWPGTDEPGA-LPSLAPTLPDNFTLQAELVMDLEVEHGLMLENL 136
Query: 353 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG-LQGYWDPYPIDMEFRPPCMVLSTIGIS 411
LDLAHAPFTHT TFAKGW VP V+F A+ G+WDPYPI M F PPC V+STIG+
Sbjct: 137 LDLAHAPFTHTGTFAKGWPVPPFVRFANAATTPWTGHWDPYPIHMTFEPPCFVISTIGLR 196
Query: 412 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 471
+ C HLHQ+H CLP + +TRLLYR++LDF L+ VP LW+H A
Sbjct: 197 G---------KDCGRHLHQVHACLPRGQGRTRLLYRLALDFGHWLRWVPGTHCLWQHLAN 247
Query: 472 QVLNEDLRLVLGQQERMNNGANVWNLPVG 500
+V+ EDLRLV GQQER+ GANVWN PVG
Sbjct: 248 RVIQEDLRLVQGQQERLKGGANVWNQPVG 276
>gi|414878610|tpg|DAA55741.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 279
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/267 (59%), Positives = 190/267 (71%), Gaps = 40/267 (14%)
Query: 30 GGFRVFALFGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCD 89
GG +V+A+ E+G + + LF V+DP + P KFLDVN+ALEV R+DIQYCD
Sbjct: 31 GGIKVYAVLREDGAEFARNNNLEALFQVDDPGPRAPV--KKFLDVNEALEVVRFDIQYCD 88
Query: 90 WRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHISEARVA 149
WRARQD+LTIMLLH KVVEVLNPLAR++KSIGT++KELAELQ++L +AH QVH+SEARV+
Sbjct: 89 WRARQDLLTIMLLHSKVVEVLNPLAREFKSIGTLRKELAELQQELEKAHNQVHLSEARVS 148
Query: 150 TALDKLAYMEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDI-------------VKGKL 196
+ALDKLA+ME LV ++PST++ K K
Sbjct: 149 SALDKLAHMETLV-----------------SAPSTAEPPTSSSLSATASSTARVRAKNKQ 191
Query: 197 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD-DTMEP-------WVIFRGKDGIPGCV 248
PR+ L+VSGPV+PYN LKNFW+PVAFS+DLK DTM P WVIFRGKDG PGCV
Sbjct: 192 PRRRLDVSGPVKPYNPSLKNFWYPVAFSSDLKAPDTMVPIDCFEEQWVIFRGKDGRPGCV 251
Query: 249 QNTCAHRACPLHLGSVNEGRIQCPYHG 275
QNTCAHRACPLHLGSVNEGRIQCPYHG
Sbjct: 252 QNTCAHRACPLHLGSVNEGRIQCPYHG 278
>gi|71534968|gb|AAZ32888.1| putative chlorophyll synthase [Medicago sativa]
Length = 219
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/198 (81%), Positives = 176/198 (88%), Gaps = 7/198 (3%)
Query: 197 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQ 249
P+KSLNVSGPVQ Y+ LKNFW+PVAFS DLKDD+M EPWVIFRGKDG PGCVQ
Sbjct: 9 PKKSLNVSGPVQSYHPNLKNFWYPVAFSADLKDDSMIPMECFEEPWVIFRGKDGKPGCVQ 68
Query: 250 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMI 309
NTCAHRACPLHLGSVNEGRI CPYHGWEY+TDGKCEKMPST++ NVKIKS+PCFE+EGMI
Sbjct: 69 NTCAHRACPLHLGSVNEGRIACPYHGWEYTTDGKCEKMPSTRMLNVKIKSIPCFEKEGMI 128
Query: 310 WIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
WIWPG +PP ++P LLPPSGF +HAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKG
Sbjct: 129 WIWPGSDPPAPSLPSLLPPSGFIVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKG 188
Query: 370 WSVPSLVKFLTPASGLQG 387
WS PS V FLTPASGLQG
Sbjct: 189 WSGPSFVNFLTPASGLQG 206
>gi|414878609|tpg|DAA55740.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 280
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/268 (59%), Positives = 191/268 (71%), Gaps = 41/268 (15%)
Query: 30 GGFRVFALFGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCD 89
GG +V+A+ E+G + + LF V+DP + P KFLDVN+ALEV R+DIQYCD
Sbjct: 31 GGIKVYAVLREDGAEFARNNNLEALFQVDDPGPRAPV--KKFLDVNEALEVVRFDIQYCD 88
Query: 90 WRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAH-RQVHISEARV 148
WRARQD+LTIMLLH KVVEVLNPLAR++KSIGT++KELAELQ++L +AH +QVH+SEARV
Sbjct: 89 WRARQDLLTIMLLHSKVVEVLNPLAREFKSIGTLRKELAELQQELEKAHNQQVHLSEARV 148
Query: 149 ATALDKLAYMEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDI-------------VKGK 195
++ALDKLA+ME LV ++PST++ K K
Sbjct: 149 SSALDKLAHMETLV-----------------SAPSTAEPPTSSSLSATASSTARVRAKNK 191
Query: 196 LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD-DTMEP-------WVIFRGKDGIPGC 247
PR+ L+VSGPV+PYN LKNFW+PVAFS+DLK DTM P WVIFRGKDG PGC
Sbjct: 192 QPRRRLDVSGPVKPYNPSLKNFWYPVAFSSDLKAPDTMVPIDCFEEQWVIFRGKDGRPGC 251
Query: 248 VQNTCAHRACPLHLGSVNEGRIQCPYHG 275
VQNTCAHRACPLHLGSVNEGRIQCPYHG
Sbjct: 252 VQNTCAHRACPLHLGSVNEGRIQCPYHG 279
>gi|383162350|gb|AFG63810.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162356|gb|AFG63813.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162362|gb|AFG63816.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162366|gb|AFG63818.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162368|gb|AFG63819.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162372|gb|AFG63821.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162374|gb|AFG63822.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162376|gb|AFG63823.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162378|gb|AFG63824.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
Length = 152
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 117/149 (78%), Positives = 140/149 (93%)
Query: 376 VKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCL 435
VKF+TPA+GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK+EG++T+ C+THLHQLHVC+
Sbjct: 1 VKFMTPATGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKIEGRSTQNCSTHLHQLHVCI 60
Query: 436 PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVW 495
PSSR+KTRLLYRMSLDFA +L+H+PFM LWRHFA++VLNEDLRLV+GQQ+RM G+NVW
Sbjct: 61 PSSRQKTRLLYRMSLDFAPLLQHIPFMHILWRHFADKVLNEDLRLVIGQQDRMVRGSNVW 120
Query: 496 NLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
NLPV YDKLG+RYR+WR+A+E G ++LPF
Sbjct: 121 NLPVSYDKLGIRYRIWRNAVEDGQQRLPF 149
>gi|383162346|gb|AFG63808.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162348|gb|AFG63809.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162352|gb|AFG63811.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162354|gb|AFG63812.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162358|gb|AFG63814.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162360|gb|AFG63815.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162364|gb|AFG63817.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162370|gb|AFG63820.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
Length = 152
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 116/149 (77%), Positives = 140/149 (93%)
Query: 376 VKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCL 435
VKF+TPA+GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK+EG++T+ C+THLHQLHVC+
Sbjct: 1 VKFMTPATGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKIEGRSTQNCSTHLHQLHVCI 60
Query: 436 PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVW 495
PSSR+KTRLLYRMSLDFA +L+H+PF+ LWRHFA++VLNEDLRLV+GQQ+RM G+NVW
Sbjct: 61 PSSRQKTRLLYRMSLDFAPLLQHIPFIHILWRHFADKVLNEDLRLVIGQQDRMVRGSNVW 120
Query: 496 NLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
NLPV YDKLG+RYR+WR+A+E G ++LPF
Sbjct: 121 NLPVSYDKLGIRYRIWRNAVEDGQQRLPF 149
>gi|413944185|gb|AFW76834.1| hypothetical protein ZEAMMB73_287624 [Zea mays]
Length = 445
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/137 (89%), Positives = 130/137 (94%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
E WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST++
Sbjct: 293 EQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKM 352
Query: 293 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 352
NV+I+SLPCFEQEGMIWIWPGD+PP ATIP LLPPSGF +HAEIVMELP+EH LLLDNL
Sbjct: 353 LNVRIQSLPCFEQEGMIWIWPGDDPPKATIPSLLPPSGFIVHAEIVMELPVEHVLLLDNL 412
Query: 353 LDLAHAPFTHTSTFAKG 369
LDLAHAPFTHTSTFAKG
Sbjct: 413 LDLAHAPFTHTSTFAKG 429
>gi|308809960|ref|XP_003082289.1| chlorophyll a oxygenase (ISS) [Ostreococcus tauri]
gi|116060757|emb|CAL57235.1| chlorophyll a oxygenase (ISS) [Ostreococcus tauri]
Length = 381
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 192/333 (57%), Gaps = 63/333 (18%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
+++++ FWFPV F + K++ E ++E +
Sbjct: 73 DSKVREFWFPVMFESKFKENDDE-------------------------FEFNLLDEMWVL 107
Query: 271 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGD-EPPTATIPC-LLPP 328
G EY CE S + + +K +G++ +WPG E PT +P PP
Sbjct: 108 RKLTGSEYV----CESKKSRRTLSTGVK-------DGLVMVWPGTCEAPTEQLPSHFAPP 156
Query: 329 SGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP------ 381
SG+ IHAE++++ +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP++VKF +
Sbjct: 157 SGYTIHAELIIDDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPNMVKFASSKLRKSG 216
Query: 382 ----------ASG-LQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL-------EGQNTRQ 423
A+G +G W PYPIDM+F PCMV S IG+++ G + EG +
Sbjct: 217 DGWHDMGNFLANGKSEGSWKPYPIDMKFLAPCMVDSHIGLAQAGAVGSGAQFKEGVTADE 276
Query: 424 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 483
C HLHQLHVCLPS+ +TRLLYRMSLDFA+ +++P ++ +W A QVL EDLRLV+G
Sbjct: 277 CPKHLHQLHVCLPSAPGRTRLLYRMSLDFANWAQYIPGIEMIWTEMANQVLGEDLRLVVG 336
Query: 484 QQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 516
QQ+RM G VW PV YDKLG+ YR WR+ +E
Sbjct: 337 QQDRMQRGGRVWAHPVAYDKLGLHYRRWRNVME 369
>gi|238767618|dbj|BAH66648.1| chlorophyllide a oxygenase [Mantoniella squamata]
Length = 329
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/265 (50%), Positives = 167/265 (63%), Gaps = 27/265 (10%)
Query: 281 DGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL-PPSGFEIHAEIVM 339
DG + ST + LP Q+G++ +WPG P A +P PP G+ +HAE+++
Sbjct: 57 DGWVCRSKSTTETGTPVSHLPIGLQDGLVMVWPGTCKPEAKLPTTFKPPEGYTVHAELII 116
Query: 340 E-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP------------ASGL- 385
E +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP+ V+F+T A+GL
Sbjct: 117 EDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPNFVEFVTSKMRKPGDGWHDMATGLK 176
Query: 386 -----QGYWDPYPIDMEFRPPCMVLSTIGISKPGKL-------EGQNTRQCATHLHQLHV 433
QG W+PYPIDM+F PCMV S IG+S+ G EG +CA HLHQLHV
Sbjct: 177 GLGSQQGSWNPYPIDMKFVTPCMVDSHIGMSQAGAAGGGAQFEEGVQCVECANHLHQLHV 236
Query: 434 CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGAN 493
C PS +TRLLYRMSLDFA K+VP ++ +W A QVL EDLRLV GQQ+RM G
Sbjct: 237 CCPSKPGRTRLLYRMSLDFAGWAKYVPGIELVWTEMANQVLGEDLRLVTGQQDRMARGGR 296
Query: 494 VWNLPVGYDKLGVRYRLWRDALEKG 518
VW PV YDKLG+ YR WR+ + G
Sbjct: 297 VWAHPVAYDKLGLVYRRWRNMVVDG 321
>gi|238767616|dbj|BAH66647.1| chlorophyllide a oxygenase [Dolichomastix tenuilepis]
Length = 315
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 156/241 (64%), Gaps = 22/241 (9%)
Query: 298 KSLPCFEQEGMIWIWPGDEPPTATIP-CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDL 355
+ LP Q+G++ +WPG P +P PP G+ +HAE+V+E +P EHGLL++NLLDL
Sbjct: 47 QELPVGVQDGLVMVWPGMAAPAEELPKQFAPPEGYIVHAELVVETVPTEHGLLIENLLDL 106
Query: 356 AHAPFTHTSTFAKGWSVPSLVKFL-------------TPASGLQGYWDPYPIDMEFRPPC 402
AHAPFTHT TFAKGW VP LVKF+ T G QG W+PYPIDM F PC
Sbjct: 107 AHAPFTHTGTFAKGWGVPDLVKFVARKNQPEGWHDIATFLKGAQGSWNPYPIDMSFEAPC 166
Query: 403 MVLSTIGISKPGKL-------EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASV 455
MVLS IG+++ G + G C HLHQLH+C+P KTRLLYRM+LDFA
Sbjct: 167 MVLSYIGLAQAGAVGGGAQFERGSRASDCENHLHQLHICVPRKGGKTRLLYRMALDFAGW 226
Query: 456 LKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 515
+HVP M +WR A QVL+EDLRLV+GQQ+RM G VW PV YD+ + YR WR+++
Sbjct: 227 ARHVPGMHNVWREMANQVLDEDLRLVVGQQDRMERGGRVWGHPVAYDRCALSYRRWRNSV 286
Query: 516 E 516
E
Sbjct: 287 E 287
>gi|424513736|emb|CCO66358.1| chlorophyllide a oxygenase [Bathycoccus prasinos]
Length = 421
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 188/359 (52%), Gaps = 86/359 (23%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTME---------------PWVIFRGKDGIPGCVQNTCAHR 255
++ L+NFW+PV F + L+ E WVI R +D G ++ C
Sbjct: 98 SSALRNFWYPVTFVSKLEKAIEEVGDAKTVVECTFFGEKWVIKRRQDFETGEMKWVC--- 154
Query: 256 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGD 315
+ ++EG + LP Q+G+ +WPG
Sbjct: 155 -----MNKMDEGNV------------------------------LPSQVQDGLFMVWPGK 179
Query: 316 EPPTATIP-CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 373
P+ IP PPSG+ +HAE+V+E +P++ LL++NLLDLAHAPFTHT TFAKGW VP
Sbjct: 180 AKPSEEIPEWFKPPSGYTVHAELVIENVPVDAALLMENLLDLAHAPFTHTGTFAKGWGVP 239
Query: 374 SLVKFLT-----PASG-------------------LQGYWDPYPIDMEFRPPCMVLSTIG 409
++V+F T P G +G W PYPIDM+F PCMV S IG
Sbjct: 240 NMVEFATKQLRKPGDGWHDMATFLSGRSGGGAGYSAEGSWKPYPIDMKFITPCMVDSHIG 299
Query: 410 ISKPGKL-------EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM 462
+++PG EG C HLHQLHVC+P KTRLLYRMSLDFA K VP +
Sbjct: 300 MAQPGAAGAGAQFKEGDTCTSCEKHLHQLHVCVPQEEGKTRLLYRMSLDFAQWAKWVPGI 359
Query: 463 QYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQ 521
Q +W A QVL EDLRLV GQQ+RMN G VW PV YDK+G+ YR WR+ + K +Q
Sbjct: 360 QLVWMEMANQVLGEDLRLVEGQQDRMNRGGRVWANPVQYDKIGLVYRNWRNHVVKQEQQ 418
>gi|413944184|gb|AFW76833.1| hypothetical protein ZEAMMB73_287624 [Zea mays]
Length = 467
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 127/176 (72%), Positives = 138/176 (78%), Gaps = 14/176 (7%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
E WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST++
Sbjct: 293 EQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKM 352
Query: 293 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE---------IVMELPI 343
NV+I+SLPCFEQEGMIWIWPGD+PP ATIP LLPPSGF +HAE IVMELP+
Sbjct: 353 LNVRIQSLPCFEQEGMIWIWPGDDPPKATIPSLLPPSGFIVHAERCVLLIIQQIVMELPV 412
Query: 344 EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFR 399
EH LLLDNLLDLAHAPFTHTSTFAKG + L W P ++ + R
Sbjct: 413 EHVLLLDNLLDLAHAPFTHTSTFAKGLECSKFGEVLNTC-----IWAPRVLNEDLR 463
>gi|255078366|ref|XP_002502763.1| chlorophyll a oxygenase [Micromonas sp. RCC299]
gi|226518029|gb|ACO64021.1| chlorophyll a oxygenase [Micromonas sp. RCC299]
Length = 345
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 187/337 (55%), Gaps = 57/337 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMEP--------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
++NFW+PV F + L P W + R + + A C + S+
Sbjct: 20 IRNFWYPVHFWSKLTKGDASPDFPLFGEEWTLVRTDAAGVAAARASIAFPGCD-EMASIG 78
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+G GW C + + LP ++G++ +WPG P A +P
Sbjct: 79 DG-------GW------VCRSVADPAMH------LPIGVKDGLVMVWPGSCKPDAALPGT 119
Query: 326 L-PPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP-- 381
PP G+ HAE+++E +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP+ V+F+T
Sbjct: 120 FKPPEGYTTHAELIIEDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPNFVEFVTARL 179
Query: 382 ----------ASGLQ--------GYWDPYPIDMEFRPPCMVLSTIGISKPGKL------- 416
A+GL G W+PYPIDM+F PCMV S IG+S+ G
Sbjct: 180 RKPGDGWHDMANGLNLSALGGQSGSWNPYPIDMKFVVPCMVDSHIGMSQAGAAGGGAQFE 239
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 476
EG +CA HLHQLHVC+PS+ +TRLLYRMSLDFA K VP ++ +W A QVL E
Sbjct: 240 EGVQCAECANHLHQLHVCVPSTPGRTRLLYRMSLDFAGWAKWVPGIELVWTEMANQVLGE 299
Query: 477 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD 513
DLRLV GQQ+RM G VW PV YDKLG+ YR WR+
Sbjct: 300 DLRLVTGQQDRMQRGGRVWAHPVAYDKLGLVYRRWRN 336
>gi|238767624|dbj|BAH66651.1| chlorophyllide a oxygenase [Micromonas pusilla]
Length = 324
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/335 (42%), Positives = 185/335 (55%), Gaps = 57/335 (17%)
Query: 216 NFWFPVAFSTDLKDDTMEP--------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
NFW+PV F + L P W + R + + A C + S+ +G
Sbjct: 1 NFWYPVHFWSKLTKGDASPDFPLFGEEWTLVRTDAAGVAAARASIAFPGCD-EMASIGDG 59
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL- 326
C + P+T L P ++G++ +WPG P A +P
Sbjct: 60 GWVC-----------RSVADPATHL--------PIGVKDGLVMVWPGSCKPDAALPGTFK 100
Query: 327 PPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP---- 381
PP G+ HAE+++E +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP+ V+F+T
Sbjct: 101 PPEGYTTHAELIIEDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPNFVEFVTARLRK 160
Query: 382 --------ASGLQ--------GYWDPYPIDMEFRPPCMVLSTIGISKPGKL-------EG 418
A+GL G W+PYPIDM+F PCMV S IG+S+ G EG
Sbjct: 161 PGDGWHDMANGLNLAALGGQSGSWNPYPIDMKFVVPCMVDSHIGMSQAGAAGGGAQFEEG 220
Query: 419 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 478
+CA HLHQLHVC+PS+ +TRLLYRMSLDFA K VP ++ +W A QVL EDL
Sbjct: 221 VQCAECANHLHQLHVCVPSTPGRTRLLYRMSLDFAGWAKWVPGIELVWTEMANQVLGEDL 280
Query: 479 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD 513
RLV GQQ+RM G VW PV YDKLG+ YR WR+
Sbjct: 281 RLVTGQQDRMQRGGRVWAHPVAYDKLGLVYRRWRN 315
>gi|145352978|ref|XP_001420810.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581045|gb|ABO99103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 223
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 157/223 (70%), Gaps = 11/223 (4%)
Query: 305 QEGMIWIWPG-DEPPTATIPC-LLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFT 361
++G++ +WP + PT +P P G+ IHAE+++E +P+EHGLL++NLLDLAHAPFT
Sbjct: 1 RDGLVMVWPSMNCGPTEELPSHFAAPEGYTIHAELIIEDVPVEHGLLMENLLDLAHAPFT 60
Query: 362 HTSTFAKGWSVPSLVKFLTPASGLQG-YWDPYPIDMEFRPPCMVLSTIGISKPGKL---- 416
HT TFAKGW VP++VKF + G W PYPIDM+F PCMV S IG+++ G +
Sbjct: 61 HTGTFAKGWGVPNMVKFASRKLRKDGDGWKPYPIDMKFLAPCMVDSHIGLAQAGAVGKGA 120
Query: 417 ---EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
EG + +C HLHQLHVCLPS+ TRLLYRMSLDFAS ++VP ++Y+W A QV
Sbjct: 121 QFKEGVSALECEKHLHQLHVCLPSTPGHTRLLYRMSLDFASWAQYVPGIEYIWTEMANQV 180
Query: 474 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 516
L EDLRLV GQQ+RM GA VW PV YDKLG+ YR WR+ ++
Sbjct: 181 LGEDLRLVTGQQDRMQRGARVWAHPVAYDKLGLHYRRWRNVID 223
>gi|303283166|ref|XP_003060874.1| chlorophyll a oxygenase [Micromonas pusilla CCMP1545]
gi|226457225|gb|EEH54524.1| chlorophyll a oxygenase [Micromonas pusilla CCMP1545]
Length = 390
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 186/331 (56%), Gaps = 44/331 (13%)
Query: 214 LKNFWFPVAFSTDL-KDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCP 272
++N+W+P+ F + L K D +V+F + + A + + Q
Sbjct: 47 IRNYWYPIHFISKLNKGDAATSFVLFGERWELVADDDAAVAAAKTAVGVFGPEYAETQA- 105
Query: 273 YHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFE 332
+ DG ++ + + R+ + LP Q+G++ P A PP+G+
Sbjct: 106 -----HLVDGAAQRW-TCRSRDDATRFLPIGLQDGLV------MPDVALPTTFTPPAGYT 153
Query: 333 IHAEIVME-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP---------- 381
HAE+++E +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP+ V+F+T
Sbjct: 154 THAELIIEDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPTFVEFVTSKLRREGDGWQ 213
Query: 382 --ASGL----------QGYWDPYPIDMEFRPPCMVLSTIGISKPGKL-------EGQNTR 422
A GL QG W+PYPIDM+F PCMV S IG+S+ G EG
Sbjct: 214 DMARGLTREGIGLGSQQGSWNPYPIDMKFVTPCMVDSHIGMSQAGAAGKGAQFEEGVQCA 273
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 482
+C+ HLHQLHVC+PS +TRLLYRM+LDFA K+VP ++ +W A QVL EDLRLV
Sbjct: 274 ECSNHLHQLHVCVPSEPGRTRLLYRMALDFAGWAKYVPGIELVWTEMANQVLGEDLRLVT 333
Query: 483 GQQERMNNGANVWNLPVGYDKLGVRYRLWRD 513
GQQ+RM G VW PV YDKLG+ YR WR+
Sbjct: 334 GQQDRMRRGGRVWAHPVAYDKLGLVYRRWRN 364
>gi|414878607|tpg|DAA55738.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 238
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 143/204 (70%), Gaps = 21/204 (10%)
Query: 30 GGFRVFALFGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCD 89
GG +V+A+ E+G + + LF V+DP + P KFLDVN+ALEV R+DIQYCD
Sbjct: 31 GGIKVYAVLREDGAEFARNNNLEALFQVDDPGPRAPV--KKFLDVNEALEVVRFDIQYCD 88
Query: 90 WRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAH-RQVHISEARV 148
WRARQD+LTIMLLH KVVEVLNPLAR++KSIGT++KELAELQ++L +AH +QVH+SEARV
Sbjct: 89 WRARQDLLTIMLLHSKVVEVLNPLAREFKSIGTLRKELAELQQELEKAHNQQVHLSEARV 148
Query: 149 ATALDKLAYMEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDI-------VKGKLPRKSL 201
++ALDKLA+ME LV+ T P++S S K K PR+ L
Sbjct: 149 SSALDKLAHMETLVS-----------APSTAEPPTSSSLSATASSTARVRAKNKQPRRRL 197
Query: 202 NVSGPVQPYNTRLKNFWFPVAFST 225
+VSGPV+PYN LKNFW+PVAFS
Sbjct: 198 DVSGPVKPYNPSLKNFWYPVAFSA 221
>gi|414878606|tpg|DAA55737.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 238
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 143/204 (70%), Gaps = 21/204 (10%)
Query: 30 GGFRVFALFGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCD 89
GG +V+A+ E+G + + LF V+DP + P KFLDVN+ALEV R+DIQYCD
Sbjct: 31 GGIKVYAVLREDGAEFARNNNLEALFQVDDPGPRAPV--KKFLDVNEALEVVRFDIQYCD 88
Query: 90 WRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAH-RQVHISEARV 148
WRARQD+LTIMLLH KVVEVLNPLAR++KSIGT++KELAELQ++L +AH +QVH+SEARV
Sbjct: 89 WRARQDLLTIMLLHSKVVEVLNPLAREFKSIGTLRKELAELQQELEKAHNQQVHLSEARV 148
Query: 149 ATALDKLAYMEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDI-------VKGKLPRKSL 201
++ALDKLA+ME LV+ T P++S S K K PR+ L
Sbjct: 149 SSALDKLAHMETLVS-----------APSTAEPPTSSSLSATASSTARVRAKNKQPRRRL 197
Query: 202 NVSGPVQPYNTRLKNFWFPVAFST 225
+VSGPV+PYN LKNFW+PVAFS
Sbjct: 198 DVSGPVKPYNPSLKNFWYPVAFSA 221
>gi|303277817|ref|XP_003058202.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226460859|gb|EEH58153.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 289
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 165/289 (57%), Gaps = 37/289 (12%)
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ-- 291
PWV FR +DG+ GC+++ CAHRACP+ LG V EGR+QCPYHGWEY++ G+C+KMPS +
Sbjct: 10 PWVAFRDQDGMAGCIKDECAHRACPISLGKVVEGRVQCPYHGWEYTSGGECKKMPSIKNL 69
Query: 292 LRNVKIKSLPCFEQEGMIWIWPG------------DEPPTATIPCLLPPSGFEIHAEIVM 339
L NV + + P E++G++++W G + PP+A PPSGF AE+ +
Sbjct: 70 LPNVYVDAAPIVERDGLLYVWAGVWEPERAEEILSELPPSAAT---APPSGFAAMAEVTV 126
Query: 340 ELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV-PSLVKFLTPASGLQGYWDPYPIDMEF 398
++P++ +L L+D PFT T V P ++ A L+G+ P P +EF
Sbjct: 127 DVPLDAPAILSRLMDENKVPFTRVDTTTLSDDVFPKVI-----AKVLRGFGKPAPKRVEF 181
Query: 399 RPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF---ASV 455
P C++ STIG+ G GQ+ ++HQ HV LPS K R+LYR+S+DF A +
Sbjct: 182 TPACILDSTIGLDGVG---GQD-----WNVHQTHVVLPSRPGKARVLYRLSVDFVVGAEI 233
Query: 456 LKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ-ERMNNGANVWNLPVGYDK 503
+ V +W++ AE +L E L + G + E + G ++ YD+
Sbjct: 234 ARTV--GGQVWQNLAEMILQEQLEGIRGGRFEDDSVGEQAADVSQSYDE 280
>gi|145348528|ref|XP_001418699.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578929|gb|ABO96992.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 386
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 160/315 (50%), Gaps = 39/315 (12%)
Query: 198 RKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM--------EPWVIFRGKDGIPGCVQ 249
R + V G + + R ++WFPV FS +L+D PWV+FRG+DG GCV+
Sbjct: 55 RGARGVDGARRTRDAR--DYWFPVCFSGNLRDKDALVAFDLFNVPWVLFRGRDGEVGCVK 112
Query: 250 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ-LRNVKIKSLPCFEQEGM 308
+ C HRACPL LG V +GR+QCPYHGWEY T+G+C KMPS L+NV L E++GM
Sbjct: 113 DECCHRACPLSLGKVVDGRVQCPYHGWEYETNGECAKMPSCSFLKNVFADELRVIERDGM 172
Query: 309 IWIWPGDEPPT------------------ATIPCLLPPS-GFEIHAEIVMELPIEHGLLL 349
I++W G+ P A P + GF AE++ ++ ++ +++
Sbjct: 173 IFVWAGESDPADFVGPEAACESWDEDVYEANEPGMFTTGEGFVTMAEVIADVKLDSDVVV 232
Query: 350 DNLLDL---AHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLS 406
+ LLD+ A +G P L GY D P + F+P C++ S
Sbjct: 233 ERLLDITERARREPVSVKNRGRGALFPVDGTRLISKVLRIGY-DAVPQSVVFKPSCVIAS 291
Query: 407 TIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLW 466
TI + +P G T + + QLHVCLP+ TR+L+RM+ DF +W
Sbjct: 292 TIAL-RPRVGGGDGT---SMQVEQLHVCLPAKPGLTRVLFRMAFDFVPEGAQNAAGD-VW 346
Query: 467 RHFAEQVLNEDLRLV 481
++ A QVL E+L V
Sbjct: 347 KNLAMQVLQEELEDV 361
>gi|90658395|gb|ABD93562.2| chloroplast chlorophyll a oxygenase [Capsicum annuum]
gi|90658396|gb|ABD93563.2| chloroplast chlorophyll a oxygenase [Solanum tuberosum]
Length = 99
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/99 (89%), Positives = 96/99 (96%)
Query: 275 GWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIH 334
GWEYSTDGKCEKMPST+L NVKIK+LPCFEQEGMIWIWPG++PP AT+P LLPPSGF+IH
Sbjct: 1 GWEYSTDGKCEKMPSTRLLNVKIKALPCFEQEGMIWIWPGNDPPAATLPSLLPPSGFQIH 60
Query: 335 AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 373
AEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVP
Sbjct: 61 AEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 99
>gi|255071899|ref|XP_002499624.1| chlorophyllide a oxygenase [Micromonas sp. RCC299]
gi|226514886|gb|ACO60882.1| chlorophyllide a oxygenase [Micromonas sp. RCC299]
Length = 436
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 154/291 (52%), Gaps = 36/291 (12%)
Query: 215 KNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+ WFPVAF+ L + TM PWV+FR DG GC+++ CAHRACPL LG + G
Sbjct: 135 RAHWFPVAFAAGLDETTMIPFDLFNVPWVMFRDADGNAGCIKDECAHRACPLSLGKLVNG 194
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGDEPPT------ 319
+ QCPYHGWEY+T G+C KMPS + L V + + P E++G +++W G P
Sbjct: 195 KAQCPYHGWEYTTGGECVKMPSIKKMLPGVYVDAAPVVERDGFLYLWAGKWEPGIEDEVL 254
Query: 320 ATIP--CLLPPSGFEIHAEIVMELPIEHGLLLDNLLD-LAHAPFTHTSTF----AKGWSV 372
A P L PP GF AE+ +++P+E +L L+ T T +F AK S
Sbjct: 255 AKTPRRSLAPPQGFTPMAEVTVDIPMEAEEVLSRLMAPGGRTSRTATVSFDVVDAKRISD 314
Query: 373 PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK-PGKLEGQNTRQCATHLHQL 431
K + A+ L+G P P F P C++ ST+G+ PG ++HQ+
Sbjct: 315 SVFPKIV--ANVLRGLRKPVPRTATFLPACVLDSTVGLEDGPGDW----------NVHQM 362
Query: 432 HVCLPSSRKKTRLLYRMSLDFASVLKHV-PFMQYLWRHFAEQVLNEDLRLV 481
HV LP+ + RLL+R+S+DF +V + +W + A+ VL E L V
Sbjct: 363 HVVLPARPGRCRLLFRLSVDFVAVPEIARAIGGEVWANLAQMVLKEQLEGV 413
>gi|412986659|emb|CCO15085.1| iron-sulfur cluster-binding protein, Rieske family [Bathycoccus
prasinos]
Length = 448
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 155/300 (51%), Gaps = 44/300 (14%)
Query: 218 WFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG-SVNEGRI 269
WFPVAFS ++K + M PWV+FR K+G GCV++ CAHRACPL LG V EG I
Sbjct: 100 WFPVAFSKNVKFNQMIPFDLFNVPWVLFRTKEGEIGCVKDECAHRACPLSLGVQVEEGHI 159
Query: 270 QCPYHGWEYSTDGKCEKMPS--TQLRNVKIKSLPCFEQEGMIWIWPGDEP---PTATIP- 323
QC YHGWE++T G+C KMPS T L+ V + +L E +GM+++W GDE P P
Sbjct: 160 QCAYHGWEFTTRGECVKMPSCKTVLKGVYVDALKTVEHDGMVFVWAGDEGEEVPDEKDPR 219
Query: 324 ----------CLLPPSGFEIH-------AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
L P G ++ AEI +E E +L + L L
Sbjct: 220 HPTNLYVGEKSLRAPGGGSVNGTPFLTCAEIELEFENECDVLTERLFTLTQRAVNKAKLV 279
Query: 367 -AKGWSVPSLVKFL----TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
K S+ + + A L+ W P P +++F P ++S+I I ++ G +
Sbjct: 280 EEKTGSLEKIFDLVDVSAQVAKALRWGWRPVPNEIKFVPSSALVSSIDIQ---RMYGDSI 336
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
+ +HQ+HVCLPS KTR+L+RM+LDF + + +W + A Q+L E+L V
Sbjct: 337 PR---RVHQVHVCLPSRPGKTRVLFRMALDF--LPESAMVADKVWENLARQILKEELNDV 391
>gi|238767612|dbj|BAH66645.1| chlorophyllide a oxygenase [Pseudoscourfieldia marina]
Length = 151
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 109/152 (71%), Gaps = 10/152 (6%)
Query: 251 TCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEG 307
+CA RACPL LG V+E G +QCPYHGWEY G +KMPST RNVK+++L E +G
Sbjct: 1 SCAPRACPLSLGRVSEETGCVQCPYHGWEYDKSGTVKKMPSTPFARNVKVENLVVREADG 60
Query: 308 MIWIWPGDEPPTAT---IPCLLPP-SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 363
+IW WPG EP A IP LLP S FE HA+I +++P+EHGLL++NLLDL+HAPFTHT
Sbjct: 61 LIWAWPG-EPSRAESTPIPSLLPEGSNFEKHAQIQLDVPVEHGLLMENLLDLSHAPFTHT 119
Query: 364 STFAKGWSVPSLVKF-LTPASGL-QGYWDPYP 393
STFAKGW +P VKF L G+ G WDPYP
Sbjct: 120 STFAKGWPIPDSVKFHLDSGMGIVSGAWDPYP 151
>gi|308806049|ref|XP_003080336.1| chloroplast chlorophyllide a oxygenase precursor (ISS)
[Ostreococcus tauri]
gi|116058796|emb|CAL54503.1| chloroplast chlorophyllide a oxygenase precursor (ISS), partial
[Ostreococcus tauri]
Length = 327
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 144/276 (52%), Gaps = 35/276 (12%)
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ-L 292
PWV+FRGK G GCV++ C HRACPL LG V +GRIQCPYHGWEY T G+C KMPS + L
Sbjct: 40 PWVLFRGKSGDVGCVKDECCHRACPLSLGKVVDGRIQCPYHGWEYETSGECVKMPSCRFL 99
Query: 293 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC----------------------LLPPSG 330
+NV SL E++GMI++W G+ P I P G
Sbjct: 100 KNVYSDSLRVIERDGMIFVWAGESDPEDFIGAGSANAGESWDEDVYEAGEEAGMFTPRDG 159
Query: 331 FEIHAEIVMELPIEHGLLLDNLLDLAH----APFTHTSTFAKGWSVPSLVKFLTPASGLQ 386
F AE+ ++ ++ ++L+ LLD+ P + + + K ++ L+
Sbjct: 160 FVTMAEVTADVKVDSNIVLERLLDITERARRVPVSVKNRQRTPYEKADATKLISKV--LR 217
Query: 387 GYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 446
++P P + F+P C++ STI + +P KL G + + QLHVCLP+ TR+L+
Sbjct: 218 IGYEPMPQSVVFKPSCVIASTIEL-RP-KLGGAGGGK-PMLVEQLHVCLPAKPGVTRVLF 274
Query: 447 RMSLDFA-SVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
RM+ DF +H W + A QVL E+L V
Sbjct: 275 RMAFDFVPEGAQHA--AGDTWNNLAMQVLQEELEDV 308
>gi|440790930|gb|ELR12190.1| rieske [2fe2s] domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 499
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 168/371 (45%), Gaps = 79/371 (21%)
Query: 214 LKNFWFPVAFSTDLKDDTM----------------EPWVIFRGKDGIPGCVQNTCAHRAC 257
++N W+PVAF+++L +P V+FR + G CVQ+ C+HR+
Sbjct: 10 MRNHWYPVAFASELPRGAAATGSRPTDPYGFQLLGDPIVLFRDQHGAAQCVQDKCSHRSA 69
Query: 258 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL----RNVKIKSLPCFEQEGMIWIWP 313
PL +G+V +GR++C ++ + GKCE +PS + + + P E ++W+WP
Sbjct: 70 PLSVGTVRDGRLEC-----KFGSGGKCESIPSEPTTRPGKPFCVYAYPTTEVYDLVWVWP 124
Query: 314 GDEPPTATIPCLLPPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
GD P +P F+ + + + + IEHGL ++N+LD +H PFTH T
Sbjct: 125 GD--PEKASEQHIPHHLFKEYRDKSWGKDTVTRDFDIEHGLFIENILDPSHLPFTHDGTL 182
Query: 367 AKGWSVPSL-VKFL-------TPAS-----------------GL-QGYWD-----PYPID 395
+K + V+ L PA GL +G++ +P D
Sbjct: 183 SKRAKADEMKVEMLFDNVFGQAPAPRSSADDHQTDAHSHFTLGLPEGFYGMQAQAVWPAD 242
Query: 396 -------MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRM 448
F+ PC+V + S K + + QLH C+P S + R+
Sbjct: 243 ASRPAQRFTFQTPCVVRLDLQTSTTKKRPDGSY----PTMIQLHFCVPVSPTRFRVNTIF 298
Query: 449 SLDFASVLKH---VPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLG 505
+FA+ P +L R +A++++++D+ L+ GQ + N A WN V DK+
Sbjct: 299 FRNFATKFTASGGFPLGSHLNRWYADKIMDQDVELLTGQMVNLLNAAKPWNTVVRADKIA 358
Query: 506 VRYRLWRDALE 516
RYR WRD E
Sbjct: 359 ARYRRWRDQAE 369
>gi|238767614|dbj|BAH66646.1| chlorophyllide a oxygenase [Pseudoscourfieldia marina]
Length = 135
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
Query: 401 PCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV 459
PC V+STIG++ PG++ G C HL Q+H C+P+S KTRLLY M LDF +K++
Sbjct: 3 PCFVISTIGLAAPGEIRRGVKAEDCDKHLRQVHACVPASEGKTRLLYLMHLDFWPWMKNL 62
Query: 460 PFMQYLWRHFAEQVLNEDLRLVLGQQERM-NNGANVWNLPVGYDKLGVRYRLWRDAL 515
P M+ LW A QVL EDLRLVLGQQERM + +VW PV YDK+GVRYR WR+ L
Sbjct: 63 PLMEELWLSQANQVLGEDLRLVLGQQERMLKSQGDVWGAPVAYDKVGVRYRRWRNQL 119
>gi|17232499|ref|NP_489047.1| hypothetical protein alr5007 [Nostoc sp. PCC 7120]
gi|17134145|dbj|BAB76706.1| alr5007 [Nostoc sp. PCC 7120]
Length = 450
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 173/366 (47%), Gaps = 51/366 (13%)
Query: 193 KGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIP 245
+G++ + N S ++ W+P+ F D + EP+V+FR +DG
Sbjct: 7 QGEIKQAIFNSSMSENNQEFNWRHCWYPITFLQDFPKELPYSFSLYDEPFVLFRNQDGKL 66
Query: 246 GCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSL 300
GC+ + C HRA L G + +G+I+C YHGW++ TDG+C +P +T +N ++S
Sbjct: 67 GCLPDICPHRAAKLSDGQIIDGKIECLYHGWQFGTDGQCLHIPQLPKEATIPKNACVQSF 126
Query: 301 PCFEQEGMIWIWPG-----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDL 355
E++G++W+W G DE IP L P + + + +P + L++N +D
Sbjct: 127 AIVERQGIVWMWAGEADAADETLIPAIPELDKPEF--VTTDFMCNIPYDQNTLIENAIDP 184
Query: 356 AHAPFTHTSTFA-KGWSVPSLVKFLTPASGLQGYWDPYP---------IDMEFRPPCMVL 405
AH P +H T + ++P ++ + A +QG Y I++ F P +V+
Sbjct: 185 AHVPISHNGTLGNRAEALPLEMEII--AKSVQGICGRYRNVSSSLSPWININFVAPNLVM 242
Query: 406 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-VLKHVPFMQY 464
I I++ E R A + +P + + R+L+R +F+ LK P ++
Sbjct: 243 LYIPINE----ERGWYRGAAAY------SIPLGKNQCRVLFRAFQNFSQWRLKLTP--RW 290
Query: 465 LWRHFAEQVLNEDLRLVLGQQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRDALEKGAK 520
L + ++VL +D++ GQQ ER+ LP+ D V YR W L+K
Sbjct: 291 LEHWYRQKVLQQDMQQAAGQQKHIERLIKSPRELYLPLKTSDLFPVEYRKW---LDKYGS 347
Query: 521 QLPFMK 526
LPF +
Sbjct: 348 SLPFYQ 353
>gi|290978282|ref|XP_002671865.1| predicted protein [Naegleria gruberi]
gi|284085437|gb|EFC39121.1| predicted protein [Naegleria gruberi]
Length = 563
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 161/387 (41%), Gaps = 75/387 (19%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM---------EPWVIFRGKDGIPGCVQNTCAHRACPLHL 261
N + FW+PVA STD+K + EP V++R DG C + C HR+ L
Sbjct: 170 NMDMSLFWYPVALSTDIKINDKKPFVVKLLGEPLVLYRTSDGQVTCTLDLCPHRSAKLST 229
Query: 262 GSVNEGR----IQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQE-----GMIW 310
G + E ++C YHGW + DG+C ++PS +K K++ C ++ GMIW
Sbjct: 230 GEITEFEGKRSLECAYHGWRFEKDGQCVRIPSVSSERMKGLCKTIKCQSKQVHECCGMIW 289
Query: 311 IWPGDEPPTAT--IPCLLPPSGF--------EIHAEIVMELPIEHGLLLDNLLDLAHAPF 360
+WP D+ + IP L + I E ++P + L+L+NLLD AH F
Sbjct: 290 VWPNDKVKSDINQIPIELFREEYLTEDSTKPYIMLEKSRDIPCNYSLVLENLLDFAHLDF 349
Query: 361 THTSTFAKGWSVPSLVKFL-----TPASG------------------------------- 384
TH T K + L TPA
Sbjct: 350 THDGTLGKRSRATQVKTQLILSKDTPAQDDSVRSKLPTEMHFDKTIHSDSFTYRVTKPEY 409
Query: 385 --LQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKT 442
++G + F PPC V + +EG + + + Q+ +P+ + +
Sbjct: 410 QKVKGVKREFGNITSFIPPCFV----RLDNTDYIEGGDLKNAGPRISQIFCMIPTGQNEH 465
Query: 443 RLLYRM--SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN-NGANVWNLPV 499
R+++R ++ + L +P++ A+ +L++DL L+ G E + NGA V++ V
Sbjct: 466 RIIFRFYSTIPVLNYLNKIPYIYSKLLQSADTILDQDLELLFGISENVTKNGAKVFSKIV 525
Query: 500 GYDKLGVRYRLWRDALEKGAKQLPFMK 526
D YR W + K K + K
Sbjct: 526 NADAPIKAYRDWEAKMLKQNKNGIYFK 552
>gi|427730555|ref|YP_007076792.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427366474|gb|AFY49195.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 453
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 160/342 (46%), Gaps = 46/342 (13%)
Query: 215 KNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
KN W+P+ F DL + + V+FR DG GC+ + C HRA L G + +G
Sbjct: 29 KNCWYPITFLQDLPKNRPYSFSLYNQSLVLFRTPDGKLGCLTDICPHRAAKLSDGQIIDG 88
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 320
RI+C YHGW++ TDGKC +P +N +KS E +G++WIW G+
Sbjct: 89 RIECLYHGWQFGTDGKCLHIPQLAHDAKIPQNTCVKSYVVVEHQGIVWIWAGEAAAVDEK 148
Query: 321 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT-HTSTFAKGWSVPSLV 376
IP LL P F + + V E+P + ++N LD AH P H S + + P +
Sbjct: 149 RIPNLLEFDDPKFFSL--DYVFEVPYDETYFIENALDPAHVPINHHGSEMNRQDAQPLEI 206
Query: 377 KFL-TPASGLQGYW------DPYPIDMEFRPP-CMVLSTIGISKPGKLEGQNTRQCATHL 428
+ L T +G++G + D + ++F P +V + KPG G A +L
Sbjct: 207 EVLATSITGIKGRYRDTRTPDAKWVKLDFLAPNSVVYGFYDLPKPGFHSG-----LALYL 261
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM 488
LP + + R+L R +F++ K+ ++L F +V+ ED ++ G QE++
Sbjct: 262 ------LPKNPTQCRVLARFFQNFSTRRKNQLEPRWLSHLFRNRVVEEDRYMIKGVQEQV 315
Query: 489 NNGANVWN---LPVGY-DKLGVRYRLWRDALEKGAKQLPFMK 526
LP+ D L + YR W L+K LP+ +
Sbjct: 316 ERSGQSLKELYLPLKTSDMLVIEYRKW---LDKYGASLPYYQ 354
>gi|425455977|ref|ZP_18835688.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9807]
gi|389803035|emb|CCI17994.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9807]
Length = 446
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 157/333 (47%), Gaps = 52/333 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+PV F D + + +P +IFR ++G GC+ + C HR L G + GR
Sbjct: 19 QNCWYPVLFVQDWQKNPYSFSLYGQPLLIFRDQEGKWGCLLDRCPHRLAKLSTGQMIAGR 78
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--AT 321
++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 79 LECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVVERQGVLWVWLGEEETAKESD 138
Query: 322 IPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPSL 375
IP L P+ +H + V++LP E G LL+NLLD AH +H S F + + P
Sbjct: 139 IPIIKDLEDPNC--VHTDYVIDLPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLA 196
Query: 376 VKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
+ L A G++ W P + ++F P +V + P G L
Sbjct: 197 FQILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSMPNPHWYAG---------L 247
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQ 484
+ L R +RLL R +FA V QY WR H + ++L +DL L+ Q
Sbjct: 248 ALYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQ 300
Query: 485 Q---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 513
Q E+ + LP+ D L + R W D
Sbjct: 301 QQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|290975135|ref|XP_002670299.1| predicted protein [Naegleria gruberi]
gi|284083856|gb|EFC37555.1| predicted protein [Naegleria gruberi]
Length = 443
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 162/401 (40%), Gaps = 78/401 (19%)
Query: 195 KLPRKSLNVSGPVQPYNTRLKNFWFPVAFS-----TDLKDDTM----EPWVIFRGKDGIP 245
K P + V N + FW+PVA S TD K T+ EP ++R DG
Sbjct: 41 KFPNDTFKTKSDVT--NLEMTLFWYPVALSKDVSITDSKPKTIKLFGEPLALYRTSDGNI 98
Query: 246 GCVQNTCAHRACPLHLGSVNEGR----IQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKS 299
CV++ C HR+ L G V E ++C YHGW + +G+C ++PS +K +
Sbjct: 99 TCVKDLCPHRSAKLSTGQVTEFEGKRSLECAYHGWRFEKEGQCVRIPSVSSERMKGLCST 158
Query: 300 LPCFEQE-----GMIWIWPGDE--PPTATIPCLL--------PPSGFEIHAEIVMELPIE 344
+ C ++ G+IW++P D+ IP L S E+ E +LP
Sbjct: 159 IKCQAKQVHECCGLIWVFPNDKVKADINQIPLELFREEFLTDDSSKLEVLIENTRDLPCH 218
Query: 345 HGLLLDNLLDLAHAPFTHTSTFAK-------------GWSVPS----------------- 374
+ +L+NLLD AH FTH T K +PS
Sbjct: 219 YSFVLENLLDPAHLDFTHDGTIGKRSQATQIQSQLVISKDIPSDNPSRRLIPKEMQYDQS 278
Query: 375 ------LVKFLTPA-SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 427
+F P + G + + + F PPC V + + +
Sbjct: 279 IHQDSFTYRFTKPEFKKIPGLKSEFMVQLSFIPPCFV-------RMDTTDYIANERSGPR 331
Query: 428 LHQLHVCLPSSRKKTRLLYRM--SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ 485
+ Q+ +P+ + +++++ SL + L +PF++ + + + ++DL L+ G
Sbjct: 332 MSQVFCLIPTGEGEVKVIFKFYSSLSILNFLNKIPFIRNKFAKTVDMIFDQDLELLAGVY 391
Query: 486 ERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 526
E +NNG V++ V D YR W + K+ F K
Sbjct: 392 ENVNNGVKVFSKIVNADAPIKGYREWEAKMLNVNKKGIFFK 432
>gi|425447801|ref|ZP_18827783.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9443]
gi|389731630|emb|CCI04395.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9443]
Length = 446
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 156/333 (46%), Gaps = 52/333 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+PV F D + + +P +IFR ++G GC+ + C HR L G + GR
Sbjct: 19 QNCWYPVLFVQDWQKNPYSFSLYGQPLLIFRDQEGKWGCLLDRCPHRLAKLSTGQMIAGR 78
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--AT 321
++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 79 LECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVVERQGVLWVWLGEEETAKESD 138
Query: 322 IPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPSL 375
IP L P+ +H + V++LP E G LL+NL D AH +H S F + + P
Sbjct: 139 IPIIKDLEDPNC--VHTDYVIDLPYEQGYLLENLFDPAHVNISHDRSEFGAKRENAQPLA 196
Query: 376 VKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
+ L A G++ W P + ++F P +V + P G L
Sbjct: 197 FQILEISARGIRSQWRNSGNPQESWKYLDFIAPNLVHYRFSMPNPHWYAG---------L 247
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQ 484
+ L R +RLL R +FA V QY WR H + ++L +DL L+ Q
Sbjct: 248 ALYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQ 300
Query: 485 Q---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 513
Q E+ + LP+ D L + R W D
Sbjct: 301 QQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425460637|ref|ZP_18840118.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9808]
gi|389826681|emb|CCI22681.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9808]
Length = 446
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 155/333 (46%), Gaps = 52/333 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+PV F D + + +P +IFR + G GC+ + C HR L G + GR
Sbjct: 19 QNCWYPVLFVQDWQKNPYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGR 78
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--AT 321
++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 79 LECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESD 138
Query: 322 IPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPSL 375
IP L P+ +H + V++ P E G LL+NLLD AH +H S F + + P
Sbjct: 139 IPIIKDLEDPNC--VHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLA 196
Query: 376 VKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
+ L A G++ W P + ++F P +V + P G L
Sbjct: 197 FQILEVSARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPDWCAG---------L 247
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQ 484
+ L R +RLL R +FA V QY WR H + ++L +DL L+ Q
Sbjct: 248 ALYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQ 300
Query: 485 Q---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 513
Q E+ + LP+ D L + R W D
Sbjct: 301 QQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425441278|ref|ZP_18821558.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9717]
gi|389718043|emb|CCH97943.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9717]
Length = 446
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 155/333 (46%), Gaps = 52/333 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+PV F D + + +P +IFR + G GC+ + C HR L G + GR
Sbjct: 19 QNCWYPVLFVQDWQKNPYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGR 78
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--AT 321
++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 79 LECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESD 138
Query: 322 IPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPSL 375
IP L P+ +H + V++ P E G LL+NLLD AH +H S F + + P
Sbjct: 139 IPIIKDLEDPNC--VHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLA 196
Query: 376 VKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
+ L A G++ W P + ++F P +V + P G L
Sbjct: 197 FQILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFALPNPHWCAG---------L 247
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQ 484
+ L R +RLL R +FA V QY WR H + ++L +DL L+ Q
Sbjct: 248 ALYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQ 300
Query: 485 Q---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 513
Q E+ + LP+ D L + R W D
Sbjct: 301 QQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425464229|ref|ZP_18843551.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9809]
gi|389833823|emb|CCI21361.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9809]
Length = 446
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 160/346 (46%), Gaps = 55/346 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+PV F D + + +P +IFR + G GC+ + C HR L G + GR
Sbjct: 19 QNCWYPVLFVQDWQKNPYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGR 78
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--AT 321
++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 79 LECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESD 138
Query: 322 IPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPSL 375
IP L P+ +H + V++ P E G LL+NLLD AH +H S F + + P
Sbjct: 139 IPIIKDLEDPNC--VHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLA 196
Query: 376 VKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
+ L A G++ W P + ++F P +V + P G L
Sbjct: 197 FQILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG---------L 247
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQ 484
+ L R +RLL R +FA V QY WR H + ++L +DL L+ Q
Sbjct: 248 ALYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQ 300
Query: 485 Q---ERMNNGANVWNLPV-GYDKLGVRYRLWRDALEKGAKQLPFMK 526
Q E+ + LP+ D L + R W D + LP+ +
Sbjct: 301 QQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD---RYGDSLPYYQ 343
>gi|166363589|ref|YP_001655862.1| dioxygenase Rieske iron-sulfur component [Microcystis aeruginosa
NIES-843]
gi|166085962|dbj|BAG00670.1| probable dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa NIES-843]
Length = 446
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 152/333 (45%), Gaps = 52/333 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+PV F D + + +P +IFR + G GC+ + C HR L G + GR
Sbjct: 19 QNCWYPVLFVQDWQKNPYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGR 78
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--AT 321
++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 79 LECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVMERQGVLWVWLGEEETAKESD 138
Query: 322 IPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLVK 377
IP L P+ +H + V++ P E G LL+NLLD AH +H S F +
Sbjct: 139 IPIIKDLEDPNC--VHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLA 196
Query: 378 FL---TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
F A G++ W P + ++F P +V + P G L
Sbjct: 197 FQILEVSARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG---------L 247
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQ 484
+ L R +RLL R +FA V QY WR H + ++L +DL L+ Q
Sbjct: 248 ALYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQ 300
Query: 485 Q---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 513
Q E+ + LP+ D L + R W D
Sbjct: 301 QQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|422305128|ref|ZP_16392465.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9806]
gi|389789620|emb|CCI14428.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9806]
Length = 446
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 152/333 (45%), Gaps = 52/333 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+PV F D + + +P +IFR + G GC+ + C HR L G + GR
Sbjct: 19 QNCWYPVLFVQDWQKNPYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGR 78
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--AT 321
++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 79 LECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESD 138
Query: 322 IPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLVK 377
IP L P+ +H + V++ P E G LL+NLLD AH +H S F +
Sbjct: 139 IPIIKDLEDPNC--VHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLA 196
Query: 378 FL---TPASGLQGYW----DPYPI--DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
F A G++ W +P ++F P +V + P G L
Sbjct: 197 FQILEVSARGIRSQWRNSCNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG---------L 247
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQ 484
+ L R +RLL R +FA V QY WR H + ++L +DL L+ Q
Sbjct: 248 ALYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQ 300
Query: 485 Q---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 513
Q E+ + LP+ D L + R W D
Sbjct: 301 QQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425470320|ref|ZP_18849190.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9701]
gi|389884067|emb|CCI35571.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9701]
Length = 446
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 155/333 (46%), Gaps = 52/333 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+PV F D + + +P +IFR + G GC+ + C HR L G + GR
Sbjct: 19 QNCWYPVLFVQDWQKNPYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGR 78
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--AT 321
++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 79 LECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVMERQGVLWVWLGEEETAKESD 138
Query: 322 IPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPSL 375
IP L P+ ++ + V++ P E G LL+NLLD AH +H S F + + P
Sbjct: 139 IPIIKDLEDPNC--VYTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLA 196
Query: 376 VKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
+ L A G++ W P + ++F P +V + P G L
Sbjct: 197 FQILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPDWCAG---------L 247
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQ 484
+ L R +RLL R +FA V QY WR H + ++L +DL L+ Q
Sbjct: 248 ALYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQ 300
Query: 485 Q---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 513
Q E+ + LP+ D L + R W D
Sbjct: 301 QQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|440753320|ref|ZP_20932523.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
gi|440177813|gb|ELP57086.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
Length = 446
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 155/333 (46%), Gaps = 52/333 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+PV F D + + +P +IFR + G GC+ + C HR L G + GR
Sbjct: 19 QNCWYPVLFVQDWQKNPYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGR 78
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--AT 321
++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 79 LECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESD 138
Query: 322 IPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPSL 375
IP L P+ +H + +++ P E G LL+NLLD AH +H S F + + P
Sbjct: 139 IPIIKDLEDPNC--VHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLA 196
Query: 376 VKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
+ L A G++ W P + ++F P +V + P G L
Sbjct: 197 FQILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG---------L 247
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQ 484
+ L R +RLL R +FA V QY WR H + ++L +DL L+ Q
Sbjct: 248 ALYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQ 300
Query: 485 Q---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 513
Q E+ + LP+ D L + R W D
Sbjct: 301 QQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425437604|ref|ZP_18818019.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9432]
gi|389677378|emb|CCH93660.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9432]
Length = 446
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 152/333 (45%), Gaps = 52/333 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+PV F D + + +P +IFR + G GC+ + C HR L G + GR
Sbjct: 19 QNCWYPVLFVQDWQKNPYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGR 78
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--AT 321
++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 79 LECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESD 138
Query: 322 IPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLVK 377
IP L P+ +H + +++ P E G LL+NLLD AH +H S F +
Sbjct: 139 IPIIKDLEDPNC--VHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLA 196
Query: 378 FL---TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
F A G++ W P + ++F P +V + P G L
Sbjct: 197 FQILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG---------L 247
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQ 484
+ L R +RLL R +FA V QY WR H + ++L +DL L+ Q
Sbjct: 248 ALYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQ 300
Query: 485 Q---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 513
Q E+ + LP+ D L + R W D
Sbjct: 301 QQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425448723|ref|ZP_18828567.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 7941]
gi|389764003|emb|CCI09609.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 7941]
Length = 446
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 155/333 (46%), Gaps = 52/333 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+PV F D + + +P +IFR + G GC+ + C HR L G + GR
Sbjct: 19 QNCWYPVLFVQDWQKNPYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGR 78
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--AT 321
++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 79 LECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESD 138
Query: 322 IPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPSL 375
IP L P+ +H + +++ P E G LL+NLLD AH +H S F + + P
Sbjct: 139 IPIIKDLEDPNC--VHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLA 196
Query: 376 VKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
+ L A G++ W P + ++F P +V + P G L
Sbjct: 197 FQILEISARGIRSQWRNSHNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG---------L 247
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLGQ 484
+ L R +RLL R +FA V QY WR H + ++L +DL L+ Q
Sbjct: 248 ALYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQSQ 300
Query: 485 Q---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 513
Q E+ + LP+ D L + R W D
Sbjct: 301 QQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|440790926|gb|ELR12186.1| rieske [2fe2s] domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 306
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 97/182 (53%), Gaps = 29/182 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTM----------------EPWVIFRGKDGIPGCVQNTCAHRAC 257
++N W+PVAF+++L +P V+FR + G CVQ+ C+HR+
Sbjct: 10 MRNHWYPVAFASELPRGAAATGSRPTDPYGFQLLGDPIVLFRDQHGAAQCVQDKCSHRSA 69
Query: 258 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL----RNVKIKSLPCFEQEGMIWIWP 313
PL +G+V +GR++C YHGW++ + GKCE +PS + + + P E ++W+WP
Sbjct: 70 PLSVGTVRDGRLECKYHGWQFGSGGKCESIPSEPTTRPGKPFCVYAYPTTEVYDLVWVWP 129
Query: 314 GDEPPTATIPCLLPPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
GD P +P F+ + + + + I HGL ++N+LD +H PFTH T
Sbjct: 130 GD--PEKASEQHIPHHLFKEYRDKSWGKDTVTRDFDIGHGLFIENILDPSHLPFTHDGTL 187
Query: 367 AK 368
+K
Sbjct: 188 SK 189
>gi|254413280|ref|ZP_05027051.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196179900|gb|EDX74893.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 449
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 161/346 (46%), Gaps = 57/346 (16%)
Query: 215 KNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+N W+P+ F D D EP+VIF+ ++ + C+ + C HRA L G + +G
Sbjct: 29 RNCWYPICFRQDFAKDRPYGFSLYDEPFVIFKHQEELI-CLTDRCPHRAAKLSDGQLIDG 87
Query: 268 RIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPG-----DEP 317
+++C YHGW++ +G+C +P T N ++S E++G+IWIWPG DE
Sbjct: 88 KLECLYHGWQFGHEGQCLHIPQLSADGTIPVNANVRSHKVVERQGLIWIWPGAAELADEQ 147
Query: 318 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSVPSLV 376
TIP L P GF +H++ + E+P + +L+++LD AH TH + + P +
Sbjct: 148 AIPTIPQLDQP-GF-VHSDKLTEVPCDISYVLEHMLDPAHIHITHHGNQGDRAKAQPLEM 205
Query: 377 KFL-TPASGLQGY----------WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCA 425
+ L + +G +G W I +F P + I GQ A
Sbjct: 206 EILESSVNGFRGQSRNTREPNSTW----IKFDFIAPSLAHFYFSIPDKDWFFGQ-----A 256
Query: 426 THLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE-QVLNEDLRLVLGQ 484
+L P S+ K R+L R +F V + V M W H + ++L +D+ ++LGQ
Sbjct: 257 FYL------FPLSKGKCRILSRTYRNF--VTQPVKLMPRWWTHLKQNKILAQDISILLGQ 308
Query: 485 Q---ERMNNGANVWNLPV-GYDKLGVRYRLWRDALEKGAKQLPFMK 526
Q ER+ P+ D + YR W L++ LP+ +
Sbjct: 309 QHEVERLGEPVKQVYSPIPTCDTFAMEYRKW---LDRVGASLPYYR 351
>gi|357137389|ref|XP_003570283.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like
[Brachypodium distachyon]
Length = 539
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 141/298 (47%), Gaps = 37/298 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMEPWVIF-------RGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
K W+P+ S ++ DD P +F R DG+ C ++ C HR L G + +G
Sbjct: 86 KEEWYPLYLSKEVPDDAALPLTVFDRQLVLYRDADGVLRCHEDRCPHRLAKLSEGQLVDG 145
Query: 268 RIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTA 320
+++C YHGW++ +GKC K+P + RN ++ + +G++W+W P + P ++
Sbjct: 146 KLECLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARNYEVRDSQGVVWVWMSPSNPPDSS 205
Query: 321 TIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 376
+P P +GF V ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 206 KLPWFEPYARAGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQPLA 264
Query: 377 KFLTPAS--GLQGYW----DPYPID-MEFRPPCMVLSTIG-ISKPGKLEGQNTRQCATHL 428
+T + G GYW P+ + F PC++ +T+ + K GK QC
Sbjct: 265 FEVTERTRRGFAGYWARERAPHLRSLLRFEAPCVLTNTLEFVDKDGK------EQC---F 315
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 486
+C P+ + K LL R +S L V Q+ + A +V +D+ + Q E
Sbjct: 316 SAQFLCRPAGQGKAMLLVRFGSTASSPLMKV-LPQWYFHQNACKVFEQDMGFLSSQNE 372
>gi|332712318|ref|ZP_08432246.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
gi|332349124|gb|EGJ28736.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
Length = 452
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 171/343 (49%), Gaps = 55/343 (16%)
Query: 218 WFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+PV F DL D EP V+FR +DG C+ N C HRA L G + +G+I+
Sbjct: 32 WYPVTFVQDLPTDRPYSFSLYDEPLVLFRNQDGKLACLTNRCPHRAAKLSEGQIIDGKIE 91
Query: 271 CPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPC------FEQEGMIWIWPG-----DEPP 318
C YHGW++ DG+C +P QL + KI + C E++G++W+W G D+
Sbjct: 92 CLYHGWQFGRDGQCLHIP--QLPEDAKIPAKACVQSFTVVERQGIVWVWMGKPEAADQEG 149
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLVK 377
T+ L P+ ++ +++LP + ++N LD +H +H T ++ ++ P ++
Sbjct: 150 IPTVADLDNPT--VASSDYMIDLPYDQTYFIENALDPSHLYISHEGTLSSRKYAQPLEME 207
Query: 378 FLTPAS-GLQGYW-------DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 429
L ++ G++G + P+ ++++F P +V S G+ ++ R L+
Sbjct: 208 VLESSTFGIRGRYRKTRQKNSPW-VNLDFVAPNLVTYR---SSSGE---KSVRIGGAALY 260
Query: 430 QLHVCLPSSRKKTRLLYRMSLDFAS-VLKHVP-FMQYLWRHFAEQVLNEDLRLVLGQQ-- 485
LP + K R++ R + ++ LK P +M++ +R ++ L EDL LV+GQQ
Sbjct: 261 ----SLPLGKGKCRIIIRNYNNHSTWKLKLQPRWMEHWYR---DKFLEEDLPLVVGQQAE 313
Query: 486 -ERMNNGANVWNLPVGY-DKLGVRYRLWRDALEKGAKQLPFMK 526
ER+ N L + D L + YR W L+K LPF +
Sbjct: 314 VERLGTSLNSLYLQLKTSDMLLIEYRKW---LDKFGTSLPFYQ 353
>gi|186682267|ref|YP_001865463.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186464719|gb|ACC80520.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 451
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 164/352 (46%), Gaps = 55/352 (15%)
Query: 208 QPYNTRLKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLH 260
Q +N R W+PV F DL + EP+V+F+ ++G C+ + C+HRA L
Sbjct: 24 QEFNWRQS--WYPVCFLQDLPTNRPYTFSLYEEPFVLFKDQNGQLICLTDRCSHRAARLS 81
Query: 261 LGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR-----NVKIKSLPCFEQEGMIWIWPGD 315
G + +G+I+C YHGW++ +G+C +P N + S E++G+IW+W G
Sbjct: 82 DGQIIDGKIECSYHGWQFGNNGQCLHIPQLASDAKIPVNACVPSFKVLERQGIIWMWAG- 140
Query: 316 EPPTA------TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
E TA ++P P F + + V +LP + ++N++D AH P +H
Sbjct: 141 EAETAIDELIPSLPDWNKPECFNL--DYVRDLPYDQSYFIENIIDPAHVPISHDGIIGSR 198
Query: 370 WSVPSLVKFLTPAS--GLQGYWD-------PYPIDMEFRPPCMVLSTIGISKPGKLEGQN 420
+L + ++ G++G W P+ I ++F P ++L + GK G
Sbjct: 199 EDAQALDIEVIESNIQGIKGRWQRTRTPNLPW-ISLDFIAPNLILYKFANVQQGKFWG-- 255
Query: 421 TRQCATHLHQLHVCLPSSRKKTRLLYR-MSLDFASVLKHV-PFMQYLWRHFAEQVLNEDL 478
T L+ +P + + R+L R S F K + P++ ++ ++L DL
Sbjct: 256 -----TALYS----IPLGKNRCRILIRNYSNSFPQKTKLMPPWLDHIL--IRNKILEGDL 304
Query: 479 RLVLGQQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRDALEKGAKQLPFMK 526
+LV+ Q+ ER+ LP+ D L V YR W L+K LPF +
Sbjct: 305 QLVVEQKAQIERLKKNLKEVYLPLKTSDTLVVEYRKW---LDKFGSSLPFYQ 353
>gi|145353812|ref|XP_001421195.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581432|gb|ABO99488.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 492
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 146/309 (47%), Gaps = 52/309 (16%)
Query: 218 WFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE-GRI 269
W+P A+ D++ D EP V +R K G CV + C HR PL G VNE G +
Sbjct: 36 WYPAAYVADVEKDAPLTFTLLGEPLVFWRDKSGEMRCVADRCPHRLVPLSEGRVNETGEL 95
Query: 270 QCPYHGWEYSTDGKCEKMP--------STQLRNVK--IKSLPCFEQEGMIWIWPG--DEP 317
+C YHGW ++ +GKC +P T L++ + + + P E +GM+W++P D+
Sbjct: 96 ECGYHGWTFTGEGKCTSIPQIEQGTGLETALKSPRSCVAAYPTKEAQGMLWVYPTSMDKA 155
Query: 318 PTATIPCLLPPSGFE----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 373
P AT+P L ++ + +I +LP++ LL+N++D++H PFTH ++ K +
Sbjct: 156 P-ATLPDLPLIPEYDDPECVCQDIFRDLPMDWATLLENVMDVSHVPFTHHNSVGKRENAT 214
Query: 374 SLVKFLTPASGL-----QGYWDPYPID-------MEFRPPCMVLSTIGISKPGKLEGQNT 421
+ L A+G+ +G W P EF+ P ++ T+ K E T
Sbjct: 215 PVNLELASAAGVTANGFEGIWKEGPRKGKYGSQYTEFKAPTLMRHTL------KTEAFTT 268
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY--LWRHFAEQVLNEDLR 479
+P++ + RL+ R F S L F Y + H + + ED +
Sbjct: 269 LTVV-------YAVPTTPGRCRLMARFPFIFKSALPRFFFGLYPQWFSHTNQNAILEDDQ 321
Query: 480 LVLGQQERM 488
+ L +QER+
Sbjct: 322 IFLHKQERL 330
>gi|428311820|ref|YP_007122797.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428253432|gb|AFZ19391.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 447
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 163/360 (45%), Gaps = 50/360 (13%)
Query: 197 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQ 249
P +L ++ + +N R W+PV F DL ++ EP+V+FR +D C+
Sbjct: 13 PTATLPLAEQEEEFNWR--QCWYPVTFVQDLPENRPYSFSLYDEPFVLFRNQDKKLICLT 70
Query: 250 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKC---EKMPSTQLRNVK--IKSLPCFE 304
+ C HRA L G + +G+I+C YHGW++ ++G+C ++P+ +K ++S E
Sbjct: 71 DRCPHRAAKLSDGQILDGKIECLYHGWQFGSEGQCLHIPQLPTDAKIPIKACVQSFKVIE 130
Query: 305 QEGMIWIWPG-----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 359
++GMIW+W G DE TIP L P GF ++++ + EL + +++++LD AH
Sbjct: 131 RQGMIWMWAGNAEAADEDRIPTIPKLGKP-GF-VYSDKITELSCDISYVIEHMLDPAHIH 188
Query: 360 FTHTSTFAKGWSVPSLVKFLTPAS--GLQGYW------DPYPIDMEFRPPCMVLSTIGIS 411
H L + +S G +G + D +++F P + I
Sbjct: 189 IAHHGNQGNREKAQPLEMEIIESSVEGFRGRFRETRLPDQTWRNLDFIVPSLAHLHFPIP 248
Query: 412 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 471
+ G GQ P + + R+L R +F ++ V M W H +
Sbjct: 249 EKGWFFGQA-----------FYFFPLGKGRCRILTRSYRNFVTL--PVKLMPRWWIHLKQ 295
Query: 472 -QVLNEDLRLVLGQQ---ERMNNGANVWNLPVGY-DKLGVRYRLWRDALEKGAKQLPFMK 526
++L EDL +LGQQ ER+ P+ D + YR W D + LPF +
Sbjct: 296 NKILEEDLAQLLGQQQEVERLGQTIKQVYAPIETCDTFAIAYRQWVD---RYGSSLPFYR 352
>gi|73539609|ref|YP_299976.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia eutropha
JMP134]
gi|159464211|ref|XP_001690335.1| hypothetical protein CHLREDRAFT_114479 [Chlamydomonas reinhardtii]
gi|72122946|gb|AAZ65132.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
gi|158279835|gb|EDP05594.1| predicted protein [Chlamydomonas reinhardtii]
Length = 349
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 146/336 (43%), Gaps = 48/336 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ V +STD D + EP I+R DG +++ C HR PL +G
Sbjct: 3 LRNCWYMVGWSTDFTADAIVPFTVMDEPLAIYRKTDGSLAALEDRCCHRLAPLSVGRKEG 62
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPG--DEPPTATI 322
++C YHG +++ DG+C ++P + V +++ P E+ G W+W G ++ A +
Sbjct: 63 DELRCMYHGLKFAADGRCTEVPGQDRISPRVCVRAYPIVEKHGAAWVWMGEAEKADEALV 122
Query: 323 PCLLPPSGFEIHAEI-VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 381
P ++ P E + ++ + L+ DNLLDL+HAPF H +TF G S P +K +
Sbjct: 123 PPIIGPDNAEWAMQCSTFDMDVNAELISDNLLDLSHAPFVHEATF--GASDPVALKMMKE 180
Query: 382 ASGLQG---------------------YWDPYPIDME----FRPPCMVLSTIGISKPGKL 416
+ +G Y+ P D F P + + TI +PG L
Sbjct: 181 SETKRGVTQLERGVLADRWQLGRQSNPYFGARPCDDHVVSLFLVPGVFILTITSYEPGVL 240
Query: 417 E----GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
E G T + P S+ K+R + +F Q+ + A+
Sbjct: 241 ERSEGGDVTETPIFKRCTCQMITPISKNKSRFFF----NFGPWAAAADLKQHCF-GIADA 295
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY 508
ED R++ QQ+ ++ + + D+ VRY
Sbjct: 296 AFQEDKRIIEAQQDMIHRSPGRKFVLLPMDQPVVRY 331
>gi|242063354|ref|XP_002452966.1| hypothetical protein SORBIDRAFT_04g035660 [Sorghum bicolor]
gi|241932797|gb|EES05942.1| hypothetical protein SORBIDRAFT_04g035660 [Sorghum bicolor]
Length = 538
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 47/303 (15%)
Query: 215 KNFWFPVAFSTDLKDDTMEPWVIF-------RGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
K W+P+ S ++ DD P +F R +G+ C ++ C HR L G + +G
Sbjct: 85 KEEWYPLYLSKEVPDDAALPLTVFDRQLVLWRDGNGVLRCHEDRCPHRLAKLSEGQIVDG 144
Query: 268 RIQCPYHGWEYSTDGKCEKMP----------STQLRNVKIKSLPCFEQEGMIWIWPGDE- 316
+++C YHGW++ +GKC K+P S RN +++ + +G++W+W D
Sbjct: 145 KLECLYHGWQFDGEGKCVKIPQLPEGAKIPRSACARNYEVR-----DSQGVVWVWVSDAN 199
Query: 317 -PPTATIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWS 371
P +P P +GF V ELP +H +LL+NL+D AH P +H T AK
Sbjct: 200 PPDEGKLPWFEPYARAGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKRED 258
Query: 372 VPSLVKFLTPAS--GLQGYW----DPYPID-MEFRPPCMVLSTIGISKPGKLEGQNTRQC 424
L +T + G GYW P+ + + F PC++ +T+ + + T QC
Sbjct: 259 AQPLFFDVTERTPRGFAGYWGRTSTPHLRNLLRFEAPCVLTNTLEYT-----DKDGTEQC 313
Query: 425 -ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 483
+ H +C P+ + K+ LL R S L V + + A +V +D+ +
Sbjct: 314 FSAHF----LCRPAGQGKSMLLVRFGSTLRSPLAKV-LPTWYFHQNACKVFEQDMGFLSS 368
Query: 484 QQE 486
Q E
Sbjct: 369 QNE 371
>gi|307546530|ref|YP_003899009.1| vanillate monooxygenase [Halomonas elongata DSM 2581]
gi|307218554|emb|CBV43824.1| vanillate monooxygenase [Halomonas elongata DSM 2581]
Length = 383
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 141/344 (40%), Gaps = 66/344 (19%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L+D + EP V FRG +G V++ C HR PL LG V +G+
Sbjct: 37 KNTWYVACTPDELEDKPLGRTICNEPIVFFRGDEGRVAAVEDFCPHRGAPLSLGFVRDGK 96
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG E +GKC MP ++R I++ P E+ G +WIWPGD P P L+P
Sbjct: 97 LVCGYHGLEMGCNGKCSSMPGQRVRGFPSIRAYPVEERHGFVWIWPGD--PDKADPALIP 154
Query: 328 PSGFEIH---------AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 378
E+H + + ++ L++DNL+DL H + H S+ + ++
Sbjct: 155 ----ELHWANDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----PEIEE 205
Query: 379 LTPASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTI 408
P + ++G +W D P+D F PP VL +
Sbjct: 206 AAPETKVEGDEVTTGRHMHDIPAPPFWQTALRGNGLADDVPVDRWQICRFTPPSHVLIEV 265
Query: 409 GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRH 468
G++ G + P + + M+ +F P Q L
Sbjct: 266 GVAHAGHGGYDAPANLKASSIVVDFITPETDTSIWYFWGMARNFK------PEDQELTDQ 319
Query: 469 FAE---QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
E Q+ +EDL ++ QQ + + L + D GV+ R
Sbjct: 320 IREGQGQIFSEDLEMLESQQRNLLRYPDRQLLKLNIDGGGVQAR 363
>gi|427724861|ref|YP_007072138.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
gi|427356581|gb|AFY39304.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
Length = 451
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 145/337 (43%), Gaps = 62/337 (18%)
Query: 218 WFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNEGRI 269
W+PV F DL +P VI+ ++ V + C HR PL G + +G +
Sbjct: 23 WYPVHFVQDLSKTEPTRFVLLEKPLVIWWHEESQQWNVFSDVCPHRLAPLSEGRIVDGCL 82
Query: 270 QCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG-----DEP 317
+CPYHGW++S G CEK+P + + + S PC ++G+++++PG +
Sbjct: 83 ECPYHGWQFSESGSCEKIPFQKEDGTANENSRATVASYPCRVEQGLLFVYPGKLENAETQ 142
Query: 318 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 377
P TIP L G + A++ ++P + LL+N+LD +H FTH + +
Sbjct: 143 PLPTIPALDQYPGEWVMADVFRDIPYDATTLLENVLDTSHVAFTHHPRVGNRKNAKEFIL 202
Query: 378 FLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCA---------- 425
++ +G G W+ P + GKL Q T A
Sbjct: 203 DVSDIEKTGFTGIWEEGP------------------RRGKLGAQKTTFFAPSAMWHDIEE 244
Query: 426 THLHQLHVC---LPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAEQVLNEDLR 479
+ Q+ C +P+ + K R L R+ F S + + F +Y R H ++ + ED +
Sbjct: 245 SSFGQVMTCVYAVPTEKGKCRALVRLPFRFKSAIPRLVF-KYTPRWFSHVSQMGILEDDQ 303
Query: 480 LVLGQQER-----MNNGANVWNLPVGYDKLGVRYRLW 511
+ L QER N A LP G D + YR W
Sbjct: 304 IFLHLQERELEKSKKNYAQTCYLPTGSDLFVLAYRKW 340
>gi|418532828|ref|ZP_13098725.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
gi|371450154|gb|EHN63209.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
Length = 358
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 146/352 (41%), Gaps = 59/352 (16%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRA 256
+S QP T +N W+ A + ++ D + E V +R +G V++ C HR
Sbjct: 1 MSKQAQP--TYPRNTWYVAATAAEVTDKPLGRQICGERMVFYRALEGKMAAVEDFCPHRG 58
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD 315
PL LG V EG++ C YHG E DGK MP ++R IKS P E+ G +W+WPGD
Sbjct: 59 APLSLGRVCEGKLVCGYHGLEMGCDGKTVAMPGQRVRGFPAIKSYPVEERYGFVWVWPGD 118
Query: 316 EPPTATIPCLLPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTH-------- 362
+ A L+P + + E + + ++ L++DNL+DL H + H
Sbjct: 119 K--DAADAALIPDLQWHDNPEWAYDGGLFHIKADYRLMIDNLMDLTHETYVHASSIGQAE 176
Query: 363 -----------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPP 401
TS F + P K ++GL D P+D F PP
Sbjct: 177 IDETPCKTEVIGDSEVVTSRFMENIEAPPFWKMALRSNGLA---DDVPVDRWQVCRFTPP 233
Query: 402 CMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLK 457
VL +G++ GK + + + P + + M+ F ASV
Sbjct: 234 SHVLIEVGVAHAGKGGYDAADEHKVYSMVVDFITPETDGSMWYFWGMARKFNPGDASVTA 293
Query: 458 HVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ Q+ ++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 294 AIKQGQH-------KIFSEDLEMLELQQRNLEDYPQRQLLKLNIDAGGVQSR 338
>gi|299532710|ref|ZP_07046098.1| vanillate monooxygenase [Comamonas testosteroni S44]
gi|298719345|gb|EFI60314.1| vanillate monooxygenase [Comamonas testosteroni S44]
Length = 358
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 146/352 (41%), Gaps = 59/352 (16%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRA 256
+S QP T +N W+ A + ++ D + E V +R +G V++ C HR
Sbjct: 1 MSKQAQP--TYPRNTWYVAATAAEVTDKPLGRQICGERMVFYRALEGKMAAVEDFCPHRG 58
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD 315
PL LG V EG++ C YHG E DGK MP ++R IKS P E+ G +W+WPGD
Sbjct: 59 APLSLGRVCEGKLVCGYHGLEMGCDGKTVAMPGQRVRGFPAIKSYPVEERYGFVWVWPGD 118
Query: 316 EPPTATIPCLLPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTH-------- 362
+ A L+P + + E + + ++ L++DNL+DL H + H
Sbjct: 119 K--DAADAALIPDLQWHDNPEWAYDGGLFHIKADYRLMIDNLMDLTHETYVHASSIGQAE 176
Query: 363 -----------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPP 401
TS F + P K ++GL D P+D F PP
Sbjct: 177 IDETPCKTEVMGDSEVVTSRFMENIEAPPFWKMALRSNGLA---DDVPVDRWQVCRFTPP 233
Query: 402 CMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLK 457
VL +G++ GK + + + P + + M+ F ASV
Sbjct: 234 SHVLIEVGVAHAGKGGYDAADEHKVYSMVVDFITPETDGSMWYFWGMARKFNPGDASVTA 293
Query: 458 HVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ Q+ ++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 294 AIKQGQH-------KIFSEDLEMLELQQRNLEDYPQRQLLKLNIDAGGVQSR 338
>gi|293333760|ref|NP_001168313.1| hypothetical protein [Zea mays]
gi|223947409|gb|ACN27788.1| unknown [Zea mays]
gi|413939284|gb|AFW73835.1| hypothetical protein ZEAMMB73_526484 [Zea mays]
Length = 538
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 47/300 (15%)
Query: 218 WFPVAFSTDLKDDTMEPWVIF-------RGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P+ + ++ DD P +F R G+ C ++ C HR L G + +G+++
Sbjct: 88 WYPLYLAKEVPDDAALPLTVFDRQLVLWRDAHGVLRCHEDRCPHRLAKLSEGQIVDGKLE 147
Query: 271 CPYHGWEYSTDGKCEKMP----------STQLRNVKIKSLPCFEQEGMIWIWPGDE--PP 318
C YHGW++ DGKC K+P S RN +++ + +G++W+W D P
Sbjct: 148 CLYHGWQFDGDGKCVKIPQLPEGAKIPRSACARNYEVR-----DSQGVVWVWMSDANPPD 202
Query: 319 TATIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPS 374
+P P +GF V ELP +H +LL+NL+D AH P +H T AK
Sbjct: 203 EGKLPWFEPYARAGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQP 261
Query: 375 LVKFLTPAS--GLQGYWD----PYPID-MEFRPPCMVLSTIGISKPGKLEGQNTRQC-AT 426
L +T + G GYW P+ + + F PC++ +T+ + + QC +
Sbjct: 262 LFFDVTERTPRGFAGYWGRTGTPHLRNLLRFEAPCVLTNTLEFA-----DKDGREQCFSA 316
Query: 427 HLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 486
H +C P+ + K+ LL R S L V + + A +V +D+ + Q E
Sbjct: 317 HF----LCRPAGQGKSMLLVRFGSTLRSPLAKV-LPSWYFHQNACKVFEQDMGFLSSQNE 371
>gi|264680324|ref|YP_003280234.1| vanillate monoxygenase [Comamonas testosteroni CNB-2]
gi|262210840|gb|ACY34938.1| vanillate monoxygenase [Comamonas testosteroni CNB-2]
Length = 358
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 146/352 (41%), Gaps = 59/352 (16%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRA 256
+S QP T +N W+ A + ++ D + E V +R +G V++ C HR
Sbjct: 1 MSKQAQP--TYPRNTWYVAATAAEVTDKPLGRQICGERMVFYRALEGKMAAVEDFCPHRG 58
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD 315
PL LG V EG++ C YHG E DGK MP ++R IKS P E+ G +W+WPGD
Sbjct: 59 APLSLGRVCEGKLVCGYHGLEMGCDGKTVAMPGQRVRGFPAIKSYPVEERYGFVWVWPGD 118
Query: 316 EPPTATIPCLLPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTH-------- 362
+ A L+P + + E + + ++ L++DNL+DL H + H
Sbjct: 119 K--DAADAALIPDLQWHDNPEWAYDGGLFHIKADYRLMIDNLMDLTHETYVHASSIGQAE 176
Query: 363 -----------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPP 401
TS F + P K ++GL D P+D F PP
Sbjct: 177 IDETPCKTEVLGDSEVVTSRFMENIEAPPFWKMALRSNGLA---DDVPVDRWQVCRFTPP 233
Query: 402 CMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLK 457
VL +G++ GK + + + P + + M+ F ASV
Sbjct: 234 SHVLIEVGVAHAGKGGYDAADEHKVYSMVVDFITPETDGSMWYFWGMARKFNPGDASVTA 293
Query: 458 HVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ Q+ ++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 294 AIKQGQH-------KIFSEDLEMLELQQRNLEDYPQRQLLKLNIDAGGVQSR 338
>gi|91781025|ref|YP_556232.1| vanillate demethylase [Burkholderia xenovorans LB400]
gi|91693685|gb|ABE36882.1| Vanillate demethylase [Burkholderia xenovorans LB400]
Length = 353
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 42/262 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ +S DL M E V+FR DG + + C HR PLHLG + +
Sbjct: 4 LRNTWYAAGWSQDLAAGAMLGRTMLNEQLVLFRADDGTVSALSDICPHRFAPLHLGKIVD 63
Query: 267 G-RIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPT--A 320
G RIQC YH E+ G C K P + + K+++ P E+ +IW+W G++ +
Sbjct: 64 GCRIQCAYHALEFDGTGACVKNPHGKQKIPAAAKLQAYPVVEKHSLIWVWMGEQAAADPS 123
Query: 321 TIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS--- 374
IP L P SGF++ + + + L++DNL+DL+H F H +++ +
Sbjct: 124 VIPDFSMLDPDSGFQVSRRDWLHMDASYDLVVDNLMDLSHTAFLHDGILGSKYTIKADTS 183
Query: 375 --------LVKFLTPASGLQGYWD----------PYPIDMEFRPPCMVLSTIGISKPGKL 416
V L P + G++D Y ++ + P +++ G++ PG
Sbjct: 184 LEQTGETVKVTRLMPNVPVPGFFDLMFNRDGGIVDYWTEIRWNLPGCLMNNTGVTLPGA- 242
Query: 417 EGQNTRQCATHLHQLHVCLPSS 438
R T ++ +H P +
Sbjct: 243 ----PRSEGTGVYGMHFLTPET 260
>gi|125541435|gb|EAY87830.1| hypothetical protein OsI_09250 [Oryza sativa Indica Group]
Length = 539
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 47/334 (14%)
Query: 218 WFPVAFSTDLKDDTMEPWVIF-------RGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P+ + ++ DD P +F R G+ C ++ C HR L G + +G+++
Sbjct: 89 WYPLYLAKEVPDDAALPLTVFDRQLVLYRDAAGVLRCHEDRCPHRLAKLSEGQLVDGKLE 148
Query: 271 CPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIW-PGDEPPTA-TIP 323
C YHGW++ +GKC K+P + RN +S + +G++W W G PP +P
Sbjct: 149 CLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARSYEVRDSQGVVWAWMSGTNPPDERKLP 208
Query: 324 CLLPPS--GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 379
P + GF V ELP +H +LL+NL+D AH P +H T AK L +
Sbjct: 209 WFEPYARPGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQPLFFEV 267
Query: 380 TPAS--GLQGYWD----PYPID-MEFRPPCMVLSTIG-ISKPGKLEGQNTRQC-ATHLHQ 430
T + G GYW P+ + + F PC++ +T+ + K GK QC + H
Sbjct: 268 TERTPGGFAGYWGKQRTPHLRNLLRFEAPCVLTNTLEFVDKDGK------EQCFSAHF-- 319
Query: 431 LHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ----- 484
+C P+ + K+ LL R S + ++K +P ++ + A +V +D+ + Q
Sbjct: 320 --LCRPAGQGKSMLLVRFGSTQTSPLVKVLP--RWYFHQNACKVFEQDMGFLSSQNEVLL 375
Query: 485 QERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
+E+M NL D YR W D G
Sbjct: 376 REKMPTKELYLNL-RSSDTWVAEYRRWMDRAGHG 408
>gi|221065063|ref|ZP_03541168.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
gi|57116471|gb|AAW33713.1| VanA [Comamonas testosteroni]
gi|220710086|gb|EED65454.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
Length = 358
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 140/340 (41%), Gaps = 57/340 (16%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+ A + ++ D + E V +R +G V++ C HR PL LG V EG+
Sbjct: 11 RNTWYVAATAAEVTDKPLGRQICGERMVFYRALEGKMAAVEDFCPHRGAPLSLGRVCEGK 70
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG E DG+ MP ++R IKS P E+ G +W+WPGD+ A L+P
Sbjct: 71 LVCGYHGLEMGCDGRTVAMPGQRVRGFPAIKSYPVEERYGFVWVWPGDK--DAADAALIP 128
Query: 328 PSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTH-------------------- 362
+ E + + ++ L++DNL+DL H + H
Sbjct: 129 DLQWHDSPEWAYDGGLFHIKADYRLMIDNLMDLTHETYVHASSIGQAEIDETPCKTEVIG 188
Query: 363 -----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKP 413
TS F + P K ++GL D P+D F PP VL +G++
Sbjct: 189 DSEVVTSRFMENIEAPPFWKMALRSNGLA---DDVPVDRWQVCRFTPPSHVLIEVGVAHA 245
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFMQYLWRHF 469
GK + + + P + + M+ F ASV + Q+
Sbjct: 246 GKGGYDAADEHKVYSMVVDFITPETDGSMWYFWGMARKFNPGDASVTAAIKQGQH----- 300
Query: 470 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 301 --KIFSEDLEMLELQQRNLEDYPQRQLLKLNIDAGGVQSR 338
>gi|115449167|ref|NP_001048363.1| Os02g0792800 [Oryza sativa Japonica Group]
gi|47497136|dbj|BAD19185.1| putative Rieske iron-sulfur protein Tic55 [Oryza sativa Japonica
Group]
gi|47497583|dbj|BAD19653.1| putative Rieske iron-sulfur protein Tic55 [Oryza sativa Japonica
Group]
gi|113537894|dbj|BAF10277.1| Os02g0792800 [Oryza sativa Japonica Group]
gi|125583977|gb|EAZ24908.1| hypothetical protein OsJ_08688 [Oryza sativa Japonica Group]
gi|215740658|dbj|BAG97314.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767906|dbj|BAH00135.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 539
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 143/297 (48%), Gaps = 41/297 (13%)
Query: 218 WFPVAFSTDLKDDTMEPWVIF-------RGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P+ + ++ DD P +F R G+ C ++ C HR L G + +G+++
Sbjct: 89 WYPLYLAKEVPDDAALPLTVFDRQLVLYRDAAGVLRCHEDRCPHRLAKLSEGQLVDGKLE 148
Query: 271 CPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIW-PGDEPPTA-TIP 323
C YHGW++ +GKC K+P + RN +S + +G++W W G PP +P
Sbjct: 149 CLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARSYEVRDSQGVVWAWMSGTNPPDERKLP 208
Query: 324 CLLPPS--GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 379
P + GF V ELP +H +LL+NL+D AH P +H T AK L +
Sbjct: 209 WFEPYARPGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQPLFFEV 267
Query: 380 TPAS--GLQGYWD----PYPID-MEFRPPCMVLSTIG-ISKPGKLEGQNTRQC-ATHLHQ 430
T + G GYW P+ + + F PC++ +T+ + K GK QC + H
Sbjct: 268 TERTPRGFAGYWGKQRTPHLRNLLRFEAPCVLTNTLEFVDKDGK------EQCFSAHF-- 319
Query: 431 LHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 486
+C P+ + K+ LL R S + ++K +P ++ + A +V +D+ + Q E
Sbjct: 320 --LCRPAGQGKSMLLVRFGSTQTSPLVKVLP--RWYFHQNACKVFEQDMGFLSSQNE 372
>gi|399909695|ref|ZP_10778247.1| vanillate monooxygenase [Halomonas sp. KM-1]
Length = 354
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 139/341 (40%), Gaps = 60/341 (17%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + EP V+FRG +G V++ C HR PL LG V +G+
Sbjct: 9 KNTWYVACTPDEIADKPLGRTICNEPIVLFRGDEGRVAAVEDFCPHRGAPLSLGFVRDGK 68
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG E DGKC MP ++R I++ P E+ G +W+WPGD P P L+P
Sbjct: 69 LVCGYHGLEMGCDGKCAGMPGQRVRGFPSIRAYPVEERHGFVWLWPGD--PEQADPNLIP 126
Query: 328 PSGFEIH---------AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 378
E+H + + E+ L++DNL+DL H + H S+ + ++
Sbjct: 127 ----ELHWANNPDWAYGGGLYHIHCEYRLMIDNLMDLTHETYVHASSIGQ-----PEIEE 177
Query: 379 LTPASGLQG----------------YW----------DPYPID----MEFRPPCMVLSTI 408
P + + G +W D P+D F PP VL +
Sbjct: 178 AAPETTVNGDEVITSRHMENIPAPPFWQAALRGCGLADDVPVDRWQICRFTPPSHVLIEV 237
Query: 409 GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRH 468
G++ G G A + V + T + Y + + + + R
Sbjct: 238 GVAHAGN--GGYDAPAAVKASSIVVDFITPETDTSIWYFWGMARNFKPEDGELTEKI-RE 294
Query: 469 FAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
++ EDL ++ QQ + L + D GV+ R
Sbjct: 295 GQGKIFAEDLDMLEAQQRNLLRYPERQLLKLNIDGGGVQAR 335
>gi|91782291|ref|YP_557497.1| vanillate O-demethylase oxygenase [Burkholderia xenovorans LB400]
gi|91686245|gb|ABE29445.1| Vanillate O-demethylase oxygenase subunit [Burkholderia xenovorans
LB400]
Length = 345
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 149/343 (43%), Gaps = 46/343 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ AFS D+K EP V+FR G G + + C+HRA PL G V+
Sbjct: 3 LRNMWYVAAFSADVKPGKCLARTFLNEPVVLFRTASGSLGALIDRCSHRAMPLSEGHVDG 62
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
I+CPYHG E++ G C +P + ++S P E++G+IWIW G EP A +
Sbjct: 63 DIIRCPYHGLEFNAAGVCAHIPGQERIPAAANVRSYPVSERDGLIWIWMG-EPEKADLRS 121
Query: 325 LLPPSGFEIHA----EIVMELPIEHGLLLDNLLDLAHAPFTHTST--------FAKGWSV 372
++ M + LL+DN+LDL H + H +T F SV
Sbjct: 122 IMSNPEHRDPGWSWRPYYMHVNSNWQLLVDNILDLTHVAYIHANTIGGNPQTHFNADMSV 181
Query: 373 -------------PSLV--KFLTPASGLQGYWDPYPIDMEFRPPC---MVLSTIGISKPG 414
P+ V K A G +G D + + +E+R PC ++ G + G
Sbjct: 182 QFDGEKVTLLRKMPNSVPPKTYVAAGGFKGNVDRWQM-VEYR-PCGGNVLRVNAGACEVG 239
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
+ R L +H P + T ++ + D A VP M L+ F E +
Sbjct: 240 TGAYEGRRDNGFTLLNVHGVTPETETTTHYIWTICTD-APRESGVPDM--LFDQFYETIC 296
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEK 517
ED R + QQ R+N+ ++ + + D R RL + L +
Sbjct: 297 -EDERALEAQQRRINDMPDMRFVGIASDGAVSRARLLLERLHE 338
>gi|425856426|gb|AFX97753.1| chlorophyllide a oxygenase, partial [Auxenochlorella
protothecoides]
Length = 88
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 358 APFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE 417
APFTHTSTFAKGW +P +VKF L G W PYPI M F PP MV+S IG+S+PG +E
Sbjct: 1 APFTHTSTFAKGWPIPDVVKFQA-TKLLTGNWQPYPITMSFAPPNMVVSLIGLSRPGVVE 59
Query: 418 -GQNTRQCATHLHQLHVCLPSSRKKTRLL 445
G + C HLHQLHVCLPS TRLL
Sbjct: 60 RGLSAESCKRHLHQLHVCLPSRPGHTRLL 88
>gi|374367149|ref|ZP_09625217.1| vanillate O-demethylase oxygenase [Cupriavidus basilensis OR16]
gi|373101343|gb|EHP42396.1| vanillate O-demethylase oxygenase [Cupriavidus basilensis OR16]
Length = 348
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 48/342 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ +L + E V+FRG+DG +++ C HR PL LG V +G
Sbjct: 3 LKNTWYVACTPDELAGKPLGRTICNEKMVLFRGEDGNVAALEDFCPHRGAPLSLGFVRDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDE--PPTATIPC 324
++ C YHG DGKC +M ++ I+S P E+ G +W WPGD ATIP
Sbjct: 63 QLVCGYHGMTMGRDGKCARMAGQRVGGFPSIRSYPAVERYGFVWAWPGDAALADAATIPH 122
Query: 325 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 383
L S H + + ++ L++DNL+DL H + H S+ + + ++ PA+
Sbjct: 123 LEWAVSADWAHGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----AEIEESAPAT 177
Query: 384 GLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISKP 413
++G +W D P D F PP V+ +G++
Sbjct: 178 KVEGDMVVTGRHMEGIMPPPFWAAALRGNGLADDVPCDRWQICRFTPPSHVMIEVGVAHA 237
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
GK Q + P + + M+ +F + + R ++
Sbjct: 238 GKGGYHAEPQHKASSIVVDFITPETETSIWYFWGMARNFKADDAQ---LTETIRDGQGKI 294
Query: 474 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 515
EDL ++ QQ + L + D GV+ R D L
Sbjct: 295 FAEDLEMLEAQQRNILANPERKLLKLNIDAGGVQARRILDRL 336
>gi|408376802|ref|ZP_11174406.1| vanillate O-demethylase oxygenase [Agrobacterium albertimagni
AOL15]
gi|407749492|gb|EKF61004.1| vanillate O-demethylase oxygenase [Agrobacterium albertimagni
AOL15]
Length = 353
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 39/272 (14%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ +LK + +P V++R ++G P + + C HR PL LG + +
Sbjct: 9 NAWYAAAYDVELKRQLLPRTICNKPVVLYRKENGTPVALADACWHRLVPLSLGRLEGDNV 68
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG E+ G+C MPS N +KS P E+ IWIWPGD P P L+P
Sbjct: 69 ICGYHGLEFDETGRCVYMPSQDTINPSACVKSYPIAEKHRFIWIWPGD--PALADPALVP 126
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + ++E+ ++ L++DNL+DL H F H S+ G + F +
Sbjct: 127 DMHWNQDPDWAADGKLIEVKCDYRLVVDNLMDLTHETFVHGSSI--GNRAVAEAPFESSH 184
Query: 383 SGLQGY---W----DPYP-----------ID----MEFRPPCMVLSTIGISKPGKLEGQN 420
S Y W DP P +D + F PC V +G+++ G Q
Sbjct: 185 SDRFAYITRWMEDIDPPPFWRKQFGRPGKVDRWQIIRFEAPCTVTIDVGVAEAGTGAKQG 244
Query: 421 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 452
R + + L+ PS+ K + + ++
Sbjct: 245 DRSKGVNGYVLNTITPSTDKTCLYFWAFARNY 276
>gi|398811407|ref|ZP_10570207.1| ring-hydroxylating dioxygenase, large terminal subunit [Variovorax
sp. CF313]
gi|398080780|gb|EJL71578.1| ring-hydroxylating dioxygenase, large terminal subunit [Variovorax
sp. CF313]
Length = 351
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 141/334 (42%), Gaps = 46/334 (13%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V++R +G +++ C HR PL LGSV EG+
Sbjct: 4 KNAWYVACTANEIDDKPLGRMICGEKLVLYRAAEGKAAALEDFCPHRGAPLSLGSVVEGK 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL- 326
+ C YHG E DGK MP ++R I+S P E+ G +W+WPGD P + P L
Sbjct: 64 LVCGYHGLEMGCDGKTVAMPGQRVRGFPAIRSFPVIERYGFVWVWPGD--PALSDPAKLH 121
Query: 327 ----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
S + + + ++ L++DNL+DL H + H ++ + + K +T
Sbjct: 122 HLEWAESPDWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHATSIGQKEIDETPTKTVTEG 181
Query: 383 SGLQG-----------YW----------DPYPID----MEFRPPCMVLSTIGISKPGKLE 417
+ +W D P+D F PP VL +G++ GK
Sbjct: 182 DTVTTARHMENIMAPPFWRMALRGNHLADDVPVDRWQICRFTPPSHVLIEVGVAHAGK-- 239
Query: 418 GQNTRQCATHLHQLHVCLPSSRKKTRLLY--RMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
G A + + V + +T + Y M+ +F H + R ++ +
Sbjct: 240 GGYHADPAHKVSSIVVDFITPETETSIWYFWGMARNFQP---HDKALTASIREGQGKIFS 296
Query: 476 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
EDL ++ QQ + L + D GV+ R
Sbjct: 297 EDLEMLESQQRNLLAHPQRQLLKLNIDSGGVQSR 330
>gi|255597961|ref|XP_002536894.1| oxidoreductase, putative [Ricinus communis]
gi|223518190|gb|EEF25490.1| oxidoreductase, putative [Ricinus communis]
Length = 293
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 123/280 (43%), Gaps = 47/280 (16%)
Query: 207 VQPYNTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPL 259
V P + ++N W+ ++ +L + EP V++R +DG P + + C+HR PL
Sbjct: 17 VAPEDRFIRNSWYVALWADELPAGKLVHQTILGEPVVLYRKEDGAPAAIVDRCSHRFAPL 76
Query: 260 HLGSVNEG-RIQCPYHGWEYSTDGKCEKMPS---TQLRNVKIKSLPCFEQEGMIWIWPGD 315
+G + G RIQCPYHG E+ GKC K P T ++S P E+ IWIW GD
Sbjct: 77 SMGKLLPGNRIQCPYHGLEFDQTGKCVKNPHGNCTIPAASHLRSFPVIEKYKFIWIWMGD 136
Query: 316 -EPPTATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 371
+ A IP CL I + + + L++DNLLDL+H + H +
Sbjct: 137 TQADPAKIPDYSCLDTAPAAHITDTGYLNIKAHYELIVDNLLDLSHTAYVHEGILGNSGT 196
Query: 372 V------------------------PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLST 407
V P +++ L+P +G D + + P ++L
Sbjct: 197 VVADIGVEQVGDVITVARPSKDTVTPGMLQMLSPGGFERG--DQHQTISWYAPSNLILE- 253
Query: 408 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYR 447
G+SK G+ + Q T A LH+ P + + + +R
Sbjct: 254 FGVSKVGEPKSQGTGYLA-----LHLITPETARSSHYRFR 288
>gi|255548670|ref|XP_002515391.1| chlorophyll a oxygenase, putative [Ricinus communis]
gi|223545335|gb|EEF46840.1| chlorophyll a oxygenase, putative [Ricinus communis]
Length = 552
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 146/335 (43%), Gaps = 49/335 (14%)
Query: 218 WFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P+ + D+ DD + V+++ +G C ++ C HR L G + +GR++
Sbjct: 102 WYPLYLTKDVPDDAPLGLTVFDKQIVLYKDGEGELRCYEDRCPHRLAKLSEGQLIDGRLE 161
Query: 271 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF------EQEGMIWIWPGDEPPTATIPC 324
C YHGW++ +GKC K+P N KI C E +G++W+W + P P
Sbjct: 162 CLYHGWQFEGEGKCVKIPQLPT-NAKIPQSACVKTYEIRESQGVVWVWMSRKTP----PN 216
Query: 325 LLPPSGFEIHA-------EIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSL 375
L FE A ELP +H +LL+NL+D AH P +H T AK +L
Sbjct: 217 LNKLPWFENFARPGFQDTSTTHELPYDHSILLENLMDPAHIPISHDRTDWSAKREDAQAL 276
Query: 376 VKFLTPAS--GLQGYW----DPYPID-MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
+T + G G+W DP ++ + F PC++ + I ++ T
Sbjct: 277 RFKVTERTDRGFAGWWGRDKDPALLNFLRFEAPCVLQNNRDIVDENGVKHYFT------- 329
Query: 429 HQLHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE- 486
L +C P+ + K L+ R + + K +P Q+ + A +V +D+ + Q E
Sbjct: 330 -GLFLCRPTGQGKAMLIVRFGGTKRSHIAKWIP--QWYFHQNASKVFEQDMGFLSSQNEV 386
Query: 487 RMNNGANVWNLPVGY---DKLGVRYRLWRDALEKG 518
M NL + D YR W D + G
Sbjct: 387 LMKEKVPTKNLYLNLKSSDTWVAEYRKWMDKVGHG 421
>gi|297821841|ref|XP_002878803.1| hypothetical protein ARALYDRAFT_901077 [Arabidopsis lyrata subsp.
lyrata]
gi|297324642|gb|EFH55062.1| hypothetical protein ARALYDRAFT_901077 [Arabidopsis lyrata subsp.
lyrata]
Length = 539
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 147/334 (44%), Gaps = 46/334 (13%)
Query: 218 WFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P+ + ++ DD V+++ +G C ++ C HR L G + +GR++
Sbjct: 88 WYPLYLTKNIPDDAPLGLTVYDRQIVLYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLE 147
Query: 271 CPYHGWEYSTDGKCEKMP----STQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
C YHGW++ +GKC K+P S ++ + +K+ + +G++W+W + P P
Sbjct: 148 CLYHGWQFEGEGKCVKIPQLPASAKIPKAACVKTYEVKDSQGVVWVWMSTKTPPN--PEK 205
Query: 326 LP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 376
LP P F+I ELP +H +LL+NL+D AH P +H T AK LV
Sbjct: 206 LPWFENFARPGFFDI--STTHELPYDHSILLENLMDPAHVPISHDRTDFTAKREDAQPLV 263
Query: 377 KFLTPAS--GLQGYWDPYPID------MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
+T S G G W + F PC++ + + EG++ +
Sbjct: 264 FEVTERSNRGFAGTWGREKDGGKGSNLLRFDAPCVLQNN------REFEGKDG--VKNYF 315
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE-R 487
L +C P+ + K+ L+ R + S L V Q+ W A +V +D+ + Q E
Sbjct: 316 SGLFLCRPTGQGKSMLIVRFGVTKRSPLVSV-LPQWFWHQNACKVFEQDMGFLSSQNEVL 374
Query: 488 MNNGANVWNLPVGY---DKLGVRYRLWRDALEKG 518
M +L + D YR W D + G
Sbjct: 375 MKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHG 408
>gi|357465983|ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula]
gi|355492324|gb|AES73527.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula]
Length = 552
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 148/335 (44%), Gaps = 43/335 (12%)
Query: 215 KNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
K W+P+ + ++ DD + V+F+ + C ++ C HR L G + +G
Sbjct: 99 KEEWYPLYLTKNVPDDAPLGLTVFDKNLVLFKDGNDQFQCYEDRCPHRLAKLSEGQLIDG 158
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIW--PGDEPPTA 320
R++C YHGW++ +GKC K+P R+ +K+ + +G+IW+W P P +
Sbjct: 159 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVKTYEVRDSQGVIWVWMSPKVPPNVS 218
Query: 321 TIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 376
IP GF+ ELP +H +LL+NL+D AH P +H T AK L+
Sbjct: 219 KIPWFENFARPGFQ-DVSTTHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLL 277
Query: 377 KFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI-SKPGKLEGQNTRQCATHL 428
+T + G G+W P + F PC++ + I K G++ +
Sbjct: 278 FEVTERTDRGFAGWWGREKDGTKPNFLRFEAPCVLQNNREIVDKNGEI---------NYF 328
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ---- 484
L +C P+ + K+ L+ R S + + F Q+ + A +V +D+ + Q
Sbjct: 329 SGLFLCRPTGQGKSMLIVRFGGTKRSPIVKL-FPQWYFHQNASKVFEQDMGFLSSQNEIL 387
Query: 485 -QERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
+E++ NL D YR W D + G
Sbjct: 388 LKEKVPTKELYLNLKSS-DTWVAEYRKWMDKVGHG 421
>gi|257059415|ref|YP_003137303.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8802]
gi|256589581|gb|ACV00468.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8802]
Length = 450
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 159/357 (44%), Gaps = 53/357 (14%)
Query: 202 NVSGPVQPYNTRLKNFWFPVAFSTDLKDD-----TM--EPWVIFRGKDGIPGCVQNTCAH 254
+VS P KN W+P+ F D T+ EP+V+F K G C+Q+ C H
Sbjct: 16 SVSPPQSDCQLDWKNCWYPITFVQDFPKSRPYGFTLYDEPFVLFVNKQGKLVCLQDICPH 75
Query: 255 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-------RNVKIKSLPCFEQEG 307
RA L G + +G ++C YHGW+++ +GKC +P QL +N I S +++G
Sbjct: 76 RAAKLSDGQILDGNLECLYHGWQFNDEGKCVHIP--QLPDDTPIPKNACITSFFVVQKQG 133
Query: 308 MIWIWPG--DEPPTATIPCLLPPSGFEIHA-EIVMELPIEHGLLLDNLLDLAHAPFTHTS 364
+IW W G +E IP + ++ + +++LP + L++N++D AH +H
Sbjct: 134 IIWFWRGKKEEADETRIPTIANLDKRDMMVTDCMIDLPYDQTYLIENVVDPAHVHISHHG 193
Query: 365 TFAKGWSVPSLVKFLTPASGLQGYWDPYP---------IDMEFRPPCMVLSTIGISKPGK 415
+ + L + S ++G Y I ++F P +V+ + P +
Sbjct: 194 SLGNRKNAQPLTMEVKEKS-IEGIKSVYKYAKTAAMGWITLDFIAPNLVMYEFTL--PNQ 250
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLW-RHF-AEQV 473
L G T L+ LPS + RLL R +++++ ++ W H + ++
Sbjct: 251 LMG------GTALYS----LPSGKGSCRLLLR---NYSNIPNWKARLKPRWLLHLGSNRI 297
Query: 474 LNEDLRLVLGQQERMNNGANVWN---LPVGY-DKLGVRYRLWRDALEKGAKQLPFMK 526
L ED ++ +Q + LP+ D L V YR W D K LPF +
Sbjct: 298 LEEDSVFIMAEQSILEKSKQTMQDLILPLKTSDLLVVEYRKWLDTF---GKALPFYQ 351
>gi|239820364|ref|YP_002947549.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
gi|239805217|gb|ACS22283.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 352
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 136/342 (39%), Gaps = 62/342 (18%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V++R +G +++ C HR PL LG V EG+
Sbjct: 4 KNTWYVACTGNEIDDKPLGRKICGENLVLYRAAEGKATALEDFCPHRGAPLSLGRVVEGK 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG E DGK MP ++R I+S P E+ G +WIWPGD P L
Sbjct: 64 LVCGYHGLEMGCDGKTVAMPGQRVRGFPPIRSFPVIERYGFVWIWPGD-------PALAD 116
Query: 328 PSGFE----------IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------- 362
P+ + + + ++ L++DNL+DL H + H
Sbjct: 117 PAKLHHLEWAESPDWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHSTSIGQKEIDETPTT 176
Query: 363 ---------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIG 409
TS F + S P + + L D P+D F PP VL +G
Sbjct: 177 TKTEGDQVTTSRFMENISAPPFWRMALRGNHLA---DDVPVDRWQICRFTPPSHVLIEVG 233
Query: 410 ISKPGKLEGQNTRQCATHLHQLHV--CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 467
++ GK G A + + V P + + M+ +F H + R
Sbjct: 234 VAHAGK--GGYDADPAHKVSSIVVDFITPETETSHWYFWGMARNFQP---HDKALTASIR 288
Query: 468 HFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
++ +EDL ++ QQ + N L + D GV+ R
Sbjct: 289 EGQGKIFSEDLEMLESQQRNLLAHPNRSLLKLNIDSGGVQSR 330
>gi|160896799|ref|YP_001562381.1| vanillate monooxygenase [Delftia acidovorans SPH-1]
gi|160362383|gb|ABX33996.1| Vanillate monooxygenase [Delftia acidovorans SPH-1]
Length = 363
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 143/345 (41%), Gaps = 57/345 (16%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
+T KN W+ A S +++D + E +R + GI V++ C HR PL LG V
Sbjct: 2 STFPKNTWYVAATSDEIQDKPLGRRICGERIAFYRAQHGI-AAVEDFCPHRGAPLSLGFV 60
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDE--PPTAT 321
EG++ C YHG E DGK MP ++R +I+S P E+ G IW+WPGD+ A
Sbjct: 61 CEGKLVCGYHGLEMGCDGKTIAMPGQRVRGFPEIRSYPVEERHGFIWVWPGDKALADAAL 120
Query: 322 IPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 362
IP L E + + + ++ L++DNL+DL H + H
Sbjct: 121 IPKLPWHDNPEWAYGGGMFHIQADYRLMIDNLMDLTHETYVHASSIGQAEIDETPCKTET 180
Query: 363 ----------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTI 408
TS F P K ++GL D P+D F PP VL +
Sbjct: 181 RGEGADVEVVTSRFMNDIPAPPFWKMALRSNGLA---DDVPVDRWQVCRFTPPSHVLIEV 237
Query: 409 GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFMQY 464
G++ G + + + P + + + M+ F A V +
Sbjct: 238 GVAHAGHGGYDAPDEHKVYSMVVDFITPETEESMWYFWGMARRFNPGDAEVTDRI----- 292
Query: 465 LWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
R ++ +EDL+++ QQ ++ + L + D GV+ R
Sbjct: 293 --REGQHKIFSEDLQMLELQQRNLSAHPDRKLLKLNIDAGGVQSR 335
>gi|333916755|ref|YP_004490487.1| Vanillate monooxygenase [Delftia sp. Cs1-4]
gi|333746955|gb|AEF92132.1| Vanillate monooxygenase [Delftia sp. Cs1-4]
Length = 363
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 143/345 (41%), Gaps = 57/345 (16%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
+T KN W+ A S +++D + E +R + G+ V++ C HR PL LG V
Sbjct: 2 STFPKNTWYVAATSDEIQDKPLGRRICGERIAFYRAQHGV-AAVEDFCPHRGAPLSLGFV 60
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDE--PPTAT 321
EG++ C YHG E DGK MP ++R +I+S P E+ G IW+WPGD+ A
Sbjct: 61 CEGKLVCGYHGLEMGCDGKTIAMPGQRVRGFPEIRSYPVEERHGFIWVWPGDKALADAAL 120
Query: 322 IPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 362
IP L E + + + ++ L++DNL+DL H + H
Sbjct: 121 IPKLPWHDNPEWAYGGGMFHIQADYRLMIDNLMDLTHETYVHASSIGQAEIDETPCKTET 180
Query: 363 ----------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTI 408
TS F P K ++GL D P+D F PP VL +
Sbjct: 181 RGEGADVEVVTSRFMNDIPAPPFWKMALRSNGLA---DEVPVDRWQVCRFTPPSHVLIEV 237
Query: 409 GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFMQY 464
G++ G + + + P + + + M+ F A V +
Sbjct: 238 GVAHAGHGGYDAPDEHKVYSMVVDFITPETEESMWYFWGMARRFNPGDAEVTDRI----- 292
Query: 465 LWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
R ++ +EDL+++ QQ ++ + L + D GV+ R
Sbjct: 293 --REGQHKIFSEDLQMLELQQRNLSAHPDRKLLKLNIDAGGVQSR 335
>gi|168002521|ref|XP_001753962.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694938|gb|EDQ81284.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 481
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 34/271 (12%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR-N 294
V+F G C ++ C HR L G + +G+++C YHGW++ G+C K+P QL
Sbjct: 54 VLFYDDKGELNCFEDRCPHRLAKLSEGKMTDGKLECLYHGWQFEGSGQCTKIP--QLAPG 111
Query: 295 VKIKSLPCFEQ------EGMIWIWPGD----EPPTATIPCLLPPSGFEIHAEIVMELPIE 344
KI C ++ +G+IW+W GD +P GF H + ELP +
Sbjct: 112 AKIPKQACAKKYEVKVSQGVIWVWLGDRATADPKKVPWYEHYEREGF-YHLSTIHELPYD 170
Query: 345 HGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVKFLT--PASGLQGYWD-----PYPID 395
+ +LL+NL+D AH P +H T T AK + +LV +T + G G W +
Sbjct: 171 YSILLENLMDPAHIPISHDRTDTNAKRENAQALVFEVTERTSRGFAGIWKEISSPEFTNT 230
Query: 396 MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRM-SLDFAS 454
F PC + + + KP +G +L + +C PS + K+ L+ R S F
Sbjct: 231 TRFEAPCCLRNDKVVDKP---DGSK-----DYLSAVFLCRPSGQGKSMLIVRFGSTKFPD 282
Query: 455 VLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ 485
+ K +P + + V +D+ + Q
Sbjct: 283 IFKKIP--GWFLHKTSNTVFEQDMGFLASQN 311
>gi|356507174|ref|XP_003522345.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 532
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 37/295 (12%)
Query: 218 WFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P+ + ++ +D + V+F+ +G C ++ C HR L G + +GR++
Sbjct: 82 WYPLYLTQNVPEDAPLGLRVFDKQLVLFKDGNGQFRCYEDRCPHRLAKLSEGQLIDGRLE 141
Query: 271 CPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPP--TATIP 323
C YHGW++ +GKC K+P R +K+ + +G+IW+W + P + +P
Sbjct: 142 CLYHGWQFEGEGKCVKIPQLPADAKIPRAACVKTYEVRDSQGVIWVWMSLKTPPNVSKLP 201
Query: 324 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 379
GF+ + ELP +H +LL+NL+D AH P +H T AK L +
Sbjct: 202 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLCFEV 260
Query: 380 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI-SKPGKLEGQNTRQCATHLHQL 431
T + G G+W P + F PC++ + I K G++ + L
Sbjct: 261 TERTDRGFAGWWGREKDGSMPNFLRFEAPCVLQNNREIVDKNGEI---------NYFSGL 311
Query: 432 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 486
+C P+ + K+ L+ R S L V F ++ + A +V +D+ + Q E
Sbjct: 312 FLCRPTGQGKSMLIVRFGGTKRSPLAKV-FPKWYFHQNASKVFEQDMGFLSSQNE 365
>gi|325277574|ref|ZP_08143162.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. TJI-51]
gi|324097289|gb|EGB95547.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. TJI-51]
Length = 355
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 136/337 (40%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +RG+ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEKIVFYRGQQNRVAAVEDFCPHRGAPLSLGYVEDGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+P
Sbjct: 64 LVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKAFAVVERHGFIWVWPGDQ--AQADPALIP 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------- 368
+ + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 HLEWADNEEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVTG 181
Query: 369 ----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
P + +GL D P+D F PP VL +G++ G
Sbjct: 182 DEVVTARHMENIMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
K Q + P S + M+ +FA+ H + R ++
Sbjct: 239 KGGYHAAAQHKAASIVVDFITPESDTSIWYFWGMARNFAA---HDQNLTADIREGQGKIF 295
Query: 475 NEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYR 509
+EDL ++ QQ+ + N G N+ L + D GV+ R
Sbjct: 296 SEDLEMLERQQQNLLANPGRNLLKLNI--DAGGVQSR 330
>gi|15224625|ref|NP_180055.1| translocon at the inner envelope membrane of chloroplasts 55-II
[Arabidopsis thaliana]
gi|75265982|sp|Q9SK50.1|TIC55_ARATH RecName: Full=Protein TIC 55, chloroplastic; AltName:
Full=Translocon at the inner envelope membrane of
chloroplasts 55; Short=AtTIC55; AltName: Full=Translocon
at the inner envelope membrane of chloroplasts 55-II;
Flags: Precursor
gi|4559369|gb|AAD23030.1| putative Rieske iron-sulfur protein [Arabidopsis thaliana]
gi|330252538|gb|AEC07632.1| translocon at the inner envelope membrane of chloroplasts 55-II
[Arabidopsis thaliana]
Length = 539
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 218 WFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P+ + ++ +D V+++ +G C ++ C HR L G + +GR++
Sbjct: 88 WYPLYLTKNVPEDAPLGLTVYDRQIVLYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLE 147
Query: 271 CPYHGWEYSTDGKCEKMP----STQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
C YHGW++ +GKC K+P S ++ + +K+ + +G++W+W + P P
Sbjct: 148 CLYHGWQFEGEGKCVKIPQLPASAKIPKAACVKTYEVKDSQGVVWVWMSTKTPPN--PEK 205
Query: 326 LP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 376
LP P F+I ELP +H +LL+NL+D AH P +H T AK LV
Sbjct: 206 LPWFENFARPGFFDI--STTHELPYDHSILLENLMDPAHVPISHDRTDFTAKREDAQPLV 263
Query: 377 KFLTPAS--GLQGYWDPYPID------MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
+T S G G W + F PC++ + + EG++ + +
Sbjct: 264 FEVTERSNRGFAGTWGREKEGGKGSNLLRFDAPCVLQNN------REFEGKDGVK--NYF 315
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE-R 487
L +C P+ + K+ L+ R + S L V Q+ W A +V +D+ + Q E
Sbjct: 316 SGLFLCRPTGQGKSMLIVRFGVTKRSPLVSV-LPQWFWHQNACKVFEQDMGFLSSQNEVL 374
Query: 488 MNNGANVWNLPVGY---DKLGVRYRLWRDALEKG 518
M +L + D YR W D + G
Sbjct: 375 MKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHG 408
>gi|218246369|ref|YP_002371740.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8801]
gi|218166847|gb|ACK65584.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8801]
Length = 450
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 158/357 (44%), Gaps = 53/357 (14%)
Query: 202 NVSGPVQPYNTRLKNFWFPVAFSTDLKDD-----TM--EPWVIFRGKDGIPGCVQNTCAH 254
+VS P KN W+P+ F D T+ EP+V+F G C+Q+ C H
Sbjct: 16 SVSPPQSDCQLDWKNCWYPITFVQDFPKSRPYGFTLYDEPFVLFVNNQGKLVCLQDICPH 75
Query: 255 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-------RNVKIKSLPCFEQEG 307
RA L G + +G ++C YHGW+++ +GKC +P QL +N I S +++G
Sbjct: 76 RAAKLSDGQILDGNLECLYHGWQFNDEGKCVHIP--QLPDDTPIPKNACITSFFVVQKQG 133
Query: 308 MIWIWPG--DEPPTATIPCLLPPSGFEIHA-EIVMELPIEHGLLLDNLLDLAHAPFTHTS 364
+IW W G +E IP + ++ + +++LP + L++N++D AH +H
Sbjct: 134 IIWFWRGKKEEADETRIPTIANLDKRDMMVTDCMIDLPYDQTYLIENVVDPAHVHISHHG 193
Query: 365 TFAKGWSVPSLVKFLTPASGLQGYWDPYP---------IDMEFRPPCMVLSTIGISKPGK 415
+ + L + S ++G Y I ++F P +V+ + P +
Sbjct: 194 SLGNRKNAQPLTMEVKEKS-IEGIKSVYKYAKTAAMGWITLDFIAPNLVMYEFTL--PNQ 250
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLW-RHF-AEQV 473
L G T L+ LPS + RLL R +++++ ++ W H + ++
Sbjct: 251 LMG------GTALYS----LPSGKGSCRLLLR---NYSNIPNWKARLKPRWLLHLGSNRI 297
Query: 474 LNEDLRLVLGQQERMNNGANVWN---LPV-GYDKLGVRYRLWRDALEKGAKQLPFMK 526
L ED ++ +Q + LP+ D L V YR W D K LPF +
Sbjct: 298 LEEDSVFIMAEQSILEKSRQTMQDLILPLKTSDLLVVEYRKWLDTF---GKALPFYQ 351
>gi|168040321|ref|XP_001772643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676019|gb|EDQ62507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 487
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 133/313 (42%), Gaps = 48/313 (15%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 295
V+F G C ++ C HR L G V +G+++C YHGW++ G+C K+P +
Sbjct: 60 VLFYDDKGELHCFEDRCPHRLAKLSEGKVTDGKLECLYHGWQFEGSGQCTKIPQL-VPGA 118
Query: 296 KIKSLPCFE------QEGMIWIWPGDEPPTATIPCLLP------PSGFEIHAEIVMELPI 343
KI C + +G++W+W GD P LP GF+ H + ELP
Sbjct: 119 KIPKQACAKAYEVKISQGVVWVWLGDR--ATADPSKLPWFEHYEREGFQ-HISAIHELPY 175
Query: 344 EHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVKFLTPAS--GLQGYWD-----PYPI 394
++ +L++NL+D AH P +H T A+ + +LV +T S G G W +
Sbjct: 176 DYSILVENLMDPAHIPISHDRTDPSARRENAQALVFEVTERSSRGFAGKWKEISSPSFTN 235
Query: 395 DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRM-SLDFA 453
F PC+V + KP + H+ + +C P+ + K L+ R S +F
Sbjct: 236 ATRFEAPCIVRNDKEYVKPDGTDA--------HMSAVFLCRPAGQGKCMLIARFGSTNFP 287
Query: 454 SVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPV--------GYDKLG 505
LK +P + + V +D+ + Q E + NLP D
Sbjct: 288 GSLKMIP--PWYIHITSNTVFEQDMGFLASQNEDLVKK----NLPTKDLYLNLKSSDTWV 341
Query: 506 VRYRLWRDALEKG 518
+R W D + G
Sbjct: 342 SEFRKWNDLVGHG 354
>gi|303278118|ref|XP_003058352.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226459512|gb|EEH56807.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 573
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 139/331 (41%), Gaps = 63/331 (19%)
Query: 208 QPYNTRLKNFWFPVAFSTDLKDDT-------MEPWVIFRGK---------DGIPGCVQNT 251
+P + N W+PVAF DL DD EP V ++ K G C +
Sbjct: 92 EPSSYDWHNQWYPVAFVADLVDDAPFTFTLLGEPLVFWKDKTTTTNSASGGGTYRCTADK 151
Query: 252 CAHRACPLHLGSVNE-GRIQCPYHGWEY-STDGKCEKMP---------STQLRNVK--IK 298
C HR PL G VN+ G I+C YHGW + GKC +P T L + + +
Sbjct: 152 CPHRLVPLSEGRVNDAGEIECGYHGWTFDGASGKCTSIPQLPATGNAIDTALASPRSCVT 211
Query: 299 SLPCFEQEGMIWIWP--------GDEPPTATIPCLLPPSGFE-IHAEIVMELPIEHGLLL 349
P +GM+++ P PP IP + P + +I +LP+++ LL
Sbjct: 212 PYPTAVAQGMLFVLPVSALKSDPASRPPVPVIPEIDDPGASHCVVQDISRDLPMDYATLL 271
Query: 350 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA---SGLQGYWDPYPID-------MEFR 399
+N++D++H PFTH + + + +V LT G +G W P + F+
Sbjct: 272 ENVMDISHVPFTHHGSVGRRENATPVVAELTTELADGGFEGIWKEGPRNGKYGSQYTHFQ 331
Query: 400 PPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV 459
P ++ T+ T Q T + +P++ + RL+ R F +
Sbjct: 332 APALMRHTL-----------RTDQFTT--LTVVYAVPTTPGRCRLMARFPFIFKAAPPRF 378
Query: 460 PF--MQYLWRHFAEQVLNEDLRLVLGQQERM 488
F + W H + + ED ++ L +QER+
Sbjct: 379 FFKLVPRWWSHLNQNSILEDDQIFLHKQERL 409
>gi|347528238|ref|YP_004834985.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136919|dbj|BAK66528.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 359
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 112/277 (40%), Gaps = 52/277 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ AF+ ++ D + + ++FR DG + + C HR PL G V
Sbjct: 5 LKNVWYAAAFADEISDKPLARTLLDQEIMLFRKGDGTAAMLADRCPHRFAPLSGGKVIGD 64
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
IQCPYHG ++ G+C P + L+ I + P E+ G++W WPG+ P P
Sbjct: 65 EIQCPYHGLRFNAQGECTHNPHVKGGGALKAANITAWPVMEKYGILWFWPGN--PDLAEP 122
Query: 324 CLLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLV 376
LP P F + + ++ + + L++DNLLDL+HA + H +S L+
Sbjct: 123 SALPRVEFLERPDAFSV-VKGLLHVKGNYELVVDNLLDLSHASYIHPQFGGSAYSPEQLL 181
Query: 377 KFLT-----------------------PASGLQGYWDPYPI----DMEFRPPCMVLSTIG 409
T P+ L GY P+ M + PP M+
Sbjct: 182 AATTQKLERRENSIVNHRVRSGLAAPAPSQALFGYDAETPVYTKSTMTWYPPSML----- 236
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 446
G + H+ QLH P + + +
Sbjct: 237 DFDAGSWAMDEAEEDGAHIPQLHFITPETEFTSHYFF 273
>gi|17231846|ref|NP_488394.1| hypothetical protein alr4354 [Nostoc sp. PCC 7120]
gi|17133490|dbj|BAB76053.1| alr4354 [Nostoc sp. PCC 7120]
Length = 443
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 134/311 (43%), Gaps = 60/311 (19%)
Query: 250 NTCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK--------S 299
+ C HR PL G V++ G + C YHGW++ +G C +P + + K S
Sbjct: 51 DQCPHRLAPLSEGRVDDKTGNLMCSYHGWQFDPEGVCTHIPQAENPEIVTKNQKDFCVIS 110
Query: 300 LPCFEQEGMIWIWP-------GDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 352
LP +Q ++W+WP D+ P P + GF + + V +L + L++N+
Sbjct: 111 LPVRQQNDLLWVWPDVKSQELADQTPLPLSPQVDASKGF-VWSSFVRDLEYDWQTLVENV 169
Query: 353 LDLAHAPFTH-----------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPP 401
D +H PF H + + S P L++ + + + F PP
Sbjct: 170 ADPSHVPFAHHGVQGNREQARATPISIMQSTPGLIEAVADGR--------FKAKITFEPP 221
Query: 402 CMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF 461
C + I I GK G T CLP S K+R++ + +FA +L H+
Sbjct: 222 CRLEYAISIGNDGKKVGLVT-----------YCLPVSPGKSRIVAQFPRNFAKILYHL-- 268
Query: 462 MQYLWRHFAEQ--VLNEDLRLVLGQ----QERMNNGA--NVWNLPVGYDKLGVRYRLWRD 513
W H + VL+ D+ L+ Q QER + + V+ +P D+L + +R W D
Sbjct: 269 TPRWWDHVKTRNLVLDGDMILLKQQEHFLQERQLSASWKTVYKMPTSADRLVIEFRKWFD 328
Query: 514 ALEKGAKQLPF 524
+G QLP+
Sbjct: 329 KYCEG--QLPW 337
>gi|75219721|sp|O49931.1|TIC55_PEA RecName: Full=Protein TIC 55, chloroplastic; AltName: Full=Rieske
iron-sulfur protein TIC55; AltName: Full=Translocon at
the inner envelope membrane of chloroplasts 55;
Short=PsTIC55; Flags: Precursor
gi|2764524|emb|CAA04157.1| Rieske iron-sulfur protein Tic55 [Pisum sativum]
Length = 553
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 146/332 (43%), Gaps = 43/332 (12%)
Query: 218 WFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P+ + ++ D + V+FR + C ++ C HR L G + +GR++
Sbjct: 103 WYPLYLTKNVPHDAPLGLKVYDKNIVLFRDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLE 162
Query: 271 CPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPP--TATIP 323
C YHGW++ +GKC K+P ++ +K+ + +G++W+W + P + IP
Sbjct: 163 CLYHGWQFEGEGKCVKIPQLPADAKIPKSACVKTYEVRDSQGVLWVWMSRKTPPNVSKIP 222
Query: 324 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 379
GF+ ELP +H +LL+NL+D AH P +H T AK +L +
Sbjct: 223 WFENFARPGFQ-DISTTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQALGFEV 281
Query: 380 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI-SKPGKLEGQNTRQCATHLHQL 431
T + G G+W P + F PC++ + I K G++ H L
Sbjct: 282 TERTDRGFAGWWGREKDGSKPNFLRFEAPCVLQNNREIVDKNGEI---------NHFSGL 332
Query: 432 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ-----QE 486
+C P+ + K+ L+ R S L + F ++ + A +V +D+ + Q +E
Sbjct: 333 FLCRPTGQGKSMLIVRFGATKRSPLIKL-FPEWYFHQNASKVFEQDMGFLSSQNEILLKE 391
Query: 487 RMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
++ NL D YR W D + G
Sbjct: 392 KVPTKELYLNLKSS-DTWVAEYRKWMDKVGHG 422
>gi|113477251|ref|YP_723312.1| pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
gi|110168299|gb|ABG52839.1| Pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
Length = 443
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 44/303 (14%)
Query: 250 NTCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKS 299
+ C HR PL G V+E G + C YHGW+++++G C +P + +N + S
Sbjct: 51 DVCPHRLAPLSEGRVDEKTGNLMCSYHGWQFNSEGICTDIPQAENQEIIEKNRQNFCVTS 110
Query: 300 LPCFEQEGMIWIWPGDEPP--TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNL 352
LP ++ ++W+WP + A+ P L P GF + + V +L + L++N+
Sbjct: 111 LPVRQENDLLWVWPDRKTADLAASTPLPLSPQIDAEKGF-VWSSYVRDLEYDWETLVENV 169
Query: 353 LDLAHAPFTHTSTFA-KGWSVPSLVKFLTPASGL--QGYWDPYPIDMEFRPPCMVLSTIG 409
D +H PF+H + + P +++ L + P + F PPC + I
Sbjct: 170 ADPSHVPFSHHGVQGNRNKARPIVMEILQSTINVIKVSISRGLPTIITFEPPCRLEYEIS 229
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 469
I K GK G T CLP S K+R++ + +FA ++ + W H
Sbjct: 230 IGKDGKKIGLVT-----------YCLPVSPGKSRIVAQFPRNFAKIIHRL--TPRWWDHI 276
Query: 470 AEQ--VLNEDLRL------VLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQ 521
+ VL+ D+ L +L Q++ + + LP D+L + +R W D G Q
Sbjct: 277 QNRNLVLDGDMVLLNQQEYLLQQKQSSKSWKTAYQLPTSADRLVIEFRNWFDKYSHG--Q 334
Query: 522 LPF 524
LP+
Sbjct: 335 LPW 337
>gi|217076804|ref|YP_002334520.1| oxidase-related protein [Thermosipho africanus TCF52B]
gi|419761274|ref|ZP_14287530.1| oxidase-related protein [Thermosipho africanus H17ap60334]
gi|217036657|gb|ACJ75179.1| oxidase-related protein [Thermosipho africanus TCF52B]
gi|407513580|gb|EKF48477.1| oxidase-related protein [Thermosipho africanus H17ap60334]
Length = 326
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 140/342 (40%), Gaps = 57/342 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
+KN W+ V S +LK + E V +R KDG C+ + C HR L G + E
Sbjct: 2 IKNQWYIVMSSKELKKGKLVGVTRFGEKLVFWRSKDGRVNCISDICCHRGASLSHGRLLE 61
Query: 267 G-RIQCPYHGWEYSTDGKCEKMPSTQLRNV------KIKSLPCFEQEGMIWIWPGDEPPT 319
RI CP+HG+EY TDGK + +P+ RNV K+K +E IW+W GD PT
Sbjct: 62 NDRIMCPFHGFEYDTDGKVKVIPAFG-RNVEVPERYKVKKYYTYEIADFIWVWYGDGEPT 120
Query: 320 ATIPCLLPPSGFEI-HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--------- 369
IP E ++E + + ++N LD+ H P H +T KG
Sbjct: 121 H-IPKYFDDISEEFSYSEFTQVWNVNYTRAIENQLDVVHVPIVHYNTIGKGNRTVVDGPI 179
Query: 370 --WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK--LEGQNTRQCA 425
W ++ F G P I I+ K LE +
Sbjct: 180 VKWQNETMFYFYVHNRVDDG------------TPAKKPDEIDINDISKVYLEFKFPNFWQ 227
Query: 426 TH-LHQLHVC---LPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
H L +L V +P + T++ R + F + + + F VLN+D R+V
Sbjct: 228 NHILDKLRVTAAFVPIDEEHTKIYLRFYVAFTKIRFINKIISSIGNIFNRIVLNQDRRVV 287
Query: 482 LGQ-----QERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
Q + +MN + +LP+ + YR R+ L+ G
Sbjct: 288 ETQIPKKTELKMNEKLILGDLPI------IEYRKKREELKLG 323
>gi|326334247|ref|ZP_08200469.1| vanillate O-demethylase oxygenase subunit [Nocardioidaceae
bacterium Broad-1]
gi|325947942|gb|EGD40060.1| vanillate O-demethylase oxygenase subunit [Nocardioidaceae
bacterium Broad-1]
Length = 366
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 137/324 (42%), Gaps = 47/324 (14%)
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
P V++R +D P + + C HR PL +G V I+CPYHG Y+ G+C MP+ +
Sbjct: 49 PLVLYRTEDNRPVALADACWHRLAPLSMGEVIGDDIRCPYHGIVYNPAGRCVSMPAQESL 108
Query: 294 N--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP------PSGFEIHAEIVMELPIEH 345
N + S P E+ +W+W GD P A P L+P + E + EL +
Sbjct: 109 NPSALVPSFPVVERHRFVWVWVGD--PLAANPDLIPDMHQMDDPAWAGDGETI-ELDCNY 165
Query: 346 GLLLDNLLDLAHAPFTHTSTFAKG--------------------W-----SVPSLVKFLT 380
L++DNL+DL H F HTS+ G W +VP + +
Sbjct: 166 QLVMDNLMDLTHEEFLHTSSIGGGGLSESDFTVEHDGNKVRLSRWMIDIPAVPFMKAQMR 225
Query: 381 PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRK 440
G G D + + +E+ P ++ +G++K G + R + ++ P S
Sbjct: 226 AQHGYDGNVDRWQL-IEYGFPSVIRIDVGVAKTGTGAPEGDRSQGINGFVMNAITPVSAT 284
Query: 441 KTRL--LYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM--NNGANVWN 496
KT+ + + D S L Q + V ED ++ QQ+ + N +N
Sbjct: 285 KTKYHWAWMRNYDLQSQLLTSQIKQGI-----SNVFKEDTAMLQAQQQAIESNPDYEFYN 339
Query: 497 LPVGYDKLGVRYRLWRDALEKGAK 520
L + + +R R+ ALE +
Sbjct: 340 LNIDGGGMWIR-RILERALEAEGR 362
>gi|115359337|ref|YP_776475.1| vanillate monooxygenase [Burkholderia ambifaria AMMD]
gi|115284625|gb|ABI90141.1| Vanillate monooxygenase [Burkholderia ambifaria AMMD]
Length = 373
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
N LKN W+ D+ + EP V +R DG +++ C HR PL LG V
Sbjct: 14 NVFLKNAWYVACTPDDIDGKPLGRKICNEPMVFYRAADGQVAALEDFCPHRGAPLSLGFV 73
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIP 323
+G + C YHG E +GK MP ++ I+S P EQ G IW+WPGD + P
Sbjct: 74 RDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPVVEQYGFIWVWPGDA--SEADP 131
Query: 324 CLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH---------------- 362
LP + H + + ++ L++DNL+DL H + H
Sbjct: 132 AKLPALSWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAAPKT 191
Query: 363 --------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGI 410
TS F + P + +GL D P+D F PP V+ +G+
Sbjct: 192 TANGDEVVTSRFMQNVMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGV 248
Query: 411 SKPG 414
+ G
Sbjct: 249 AHAG 252
>gi|449455677|ref|XP_004145578.1| PREDICTED: protein TIC 55, chloroplastic-like [Cucumis sativus]
gi|449485314|ref|XP_004157131.1| PREDICTED: protein TIC 55, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 147/331 (44%), Gaps = 41/331 (12%)
Query: 218 WFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P+ + D+ +D + V++R G C ++ C HR L G + +GR++
Sbjct: 92 WYPLYLTKDVPEDAPLGLTVFDKQLVLYRDGAGELHCHEDRCPHRLAKLSEGQLIDGRLE 151
Query: 271 CPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA--TIP 323
C YHGW++ +GKC K+P + R+ +++ + +G++W+W E P+ +IP
Sbjct: 152 CLYHGWQFEGEGKCVKIPQLPSDAKIPRSACLRTYEVRDSQGVVWVWMSLEKPSTLKSIP 211
Query: 324 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVKFL 379
GF + I ELP +H +LL+NL+D AH P +H TS AK L +
Sbjct: 212 WFENFDRPGFRDFSSI-HELPYDHSILLENLMDPAHIPISHDRTSYPAKREDAQPLDFEV 270
Query: 380 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLH 432
T + G G W P + F PC++ + E N + + L
Sbjct: 271 TERTNRGFAGRWGNAKDQPLSNFLRFEAPCVLQN--------NRETPNKKGGIDYFTGLF 322
Query: 433 VCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ-----QER 487
+C P+ + K+ ++ R AS ++ F + A +V +D+ + Q +E+
Sbjct: 323 LCRPTGQGKSMVIVRFG-STASTVRLNLFPAWFLHQNACRVFEQDMGFLSSQNEVLMKEK 381
Query: 488 MNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
+ NL D + YR W D + G
Sbjct: 382 VPTKELYLNL-RSSDTWVLEYRRWMDKVGHG 411
>gi|427734356|ref|YP_007053900.1| Rieske (2Fe-2S) domain-containing protein [Rivularia sp. PCC 7116]
gi|427369397|gb|AFY53353.1| Rieske (2Fe-2S) domain-containing protein [Rivularia sp. PCC 7116]
Length = 445
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 148/338 (43%), Gaps = 53/338 (15%)
Query: 218 WFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE-- 266
W+PV+ D+ D +P VI++ K + C HR PL G V+E
Sbjct: 11 WYPVSPVEDI--DPKKPTAVTVLGLRLVIWKPKLSDYRVFLDKCPHRLAPLSEGRVDEKT 68
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPP 318
G + C YHGWE+ +G C ++P + +N+ SLP ++ ++W+W P
Sbjct: 69 GNLMCSYHGWEFDAEGICTRIPQAENPQLVTKNQKNLCAVSLPVRQENDLLWVWLDANSP 128
Query: 319 TATIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGW 370
LP S GF + + V +L + L++N+ D +H PFTH +
Sbjct: 129 QLANDTPLPLSPQVDANKGF-VWSSYVRDLEYDWQTLVENVADPSHVPFTHHGVQGNREQ 187
Query: 371 SVPSLVKFLTPASGLQGYWDP--YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
+ P +++ + + L + + F PPC + TI + GK G T
Sbjct: 188 ASPVILQIVKSTANLIEATSSGRFQTTITFEPPCRLEYTIRVGDEGKQLGLVT------- 240
Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA--EQVLNEDLRLVLGQ-- 484
C+P+ K+R++ + + +FA+ L + + W H +VL+ D+ L+ Q
Sbjct: 241 ----YCIPTYPGKSRIVAQFTRNFATNLNRI--IPRWWSHIKIRNKVLDGDMILLHQQEH 294
Query: 485 --QERMNNGA--NVWNLPVGYDKLGVRYRLWRDALEKG 518
QER + + + LP D+L + +R W D +G
Sbjct: 295 FLQERQSQESWKTAYQLPTSADRLIIEFRNWFDKYSQG 332
>gi|220906614|ref|YP_002481925.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7425]
gi|219863225|gb|ACL43564.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7425]
Length = 358
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKNFW+ V FS +K + +V++R G + N CAHR L G V +
Sbjct: 2 LKNFWYAVEFSHAVKHQPKQVTLMGRQYVLYRNSQGQVIALNNQCAHRGAALAGGWVEDN 61
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTA-- 320
++CPYHGW+Y+TDG C +P+ Q + ++ + P E+ G IW++ GD+P
Sbjct: 62 CLRCPYHGWKYATDGACVDIPANQPGVPIPKRARVDAYPVEEKSGFIWMYMGDQPAAERP 121
Query: 321 TIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
++P LLP P +H E + + ++++ LD+ HA F H F
Sbjct: 122 SVPDLLPELHDPHWRSVHGEYTWD--CHYTRVIESNLDVTHAAFVHPPFFGN 171
>gi|428220844|ref|YP_007105014.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427994184|gb|AFY72879.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 344
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 214 LKNFWFPV----AFSTDLKDDTM--EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKNFW+ + + ST K T V++RG +G + C HR L G V
Sbjct: 22 LKNFWYGIEHSASVSTKPKSITFMGHDLVLYRGSNGQAIALDGRCVHRGTDLGAGWVEGD 81
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTA-- 320
I CPYHGW+Y ++G C +P+ Q R K++S P E+ G+IW++ GD PP
Sbjct: 82 CIHCPYHGWKYESNGACSLIPANQPGVVIPRRAKLQSYPVQEKYGLIWLFWGDLPPEECP 141
Query: 321 TIPCL--LPPSGF-EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--------- 368
+IP L +G+ IH + E + ++ N +D+AHAPF H S F +
Sbjct: 142 SIPILPEFDQAGWRSIHGDFNWEG--HYSRVIANTIDMAHAPFVHASAFGRKDSPAVQAY 199
Query: 369 -----GWSVPSLVKFLT-PASGLQGYWDPYPIDMEFR 399
WS + F T PA L+ P D FR
Sbjct: 200 KLESGAWSASGFITFETKPAYSLKFILGNDPPDGIFR 236
>gi|119513069|ref|ZP_01632124.1| hypothetical protein N9414_17752 [Nodularia spumigena CCY9414]
gi|119462279|gb|EAW43261.1| hypothetical protein N9414_17752 [Nodularia spumigena CCY9414]
Length = 354
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 20/174 (11%)
Query: 214 LKNFWFPVAFSTDL----KDDTM--EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKNFW+ FS+ + K M + +V++R G +++ C+HR L +G + +
Sbjct: 2 LKNFWYACEFSSVVTKKPKQIVMLNQRFVLYRNSQGQVVALKDQCSHRGAALSMGWLEDN 61
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPG-----DEP 317
I+CPYHGW++ +DGKC ++PS ++ + I S P E+ G IW++ G + P
Sbjct: 62 CIRCPYHGWKFESDGKCVQIPSNEVGTPIPKKANITSYPIQEKYGFIWLFYGELPESERP 121
Query: 318 PTATIPCLLPPSGFEIHAEIV-MELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 370
P +P P+ +H + + + +L+N LDL+H P H +TF G+
Sbjct: 122 PIPALPEFDDPN---LHRSFLDFSVNTHYTRVLENALDLSHLPIVHANTFGAGF 172
>gi|393719683|ref|ZP_10339610.1| Rieske (2Fe-2S) protein [Sphingomonas echinoides ATCC 14820]
Length = 326
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 18/178 (10%)
Query: 215 KNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
K+ W+ ST L+D + P V+FR DG + + C HR L LG+V++G
Sbjct: 15 KDAWYVGVASTQLRDAPVAITLQGAPIVLFRDADGQAQALHDRCPHRGVALSLGTVSDGT 74
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIWIWPG-DEPPTATIP 323
I C YHGW + G+C +PS + +++ ++ P EQ+G +W+W G DEP A +
Sbjct: 75 IACAYHGWRFDGAGRCRHIPSLREDQTIKSAPVRRYPVAEQDGYVWLWTGTDEPEGAPLA 134
Query: 324 CLLPPSGFEIHA--EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 379
GF+ + MEL E L ++N LD+ HA FTH + + W V FL
Sbjct: 135 I----DGFDRFQWLQGAMELACEAILPIENNLDICHAAFTHPNMHPQ-WFRVQAVGFL 187
>gi|148554468|ref|YP_001262050.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499658|gb|ABQ67912.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 359
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 20/167 (11%)
Query: 212 TRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
T L+N W+ A+S++L D T+ EP V+FRG+DG + + C HR PL LG +
Sbjct: 2 TFLRNAWYAAAWSSELADGTLARTFLDEPVVLFRGEDGKAVALADMCPHRFAPLSLGRIG 61
Query: 266 EGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
I+CPYHG + G C P + ++ ++S P E++ ++WIW GD A +
Sbjct: 62 GDTIRCPYHGLVFDKMGACVHNPHGRGVRPSSLSVRSYPVLERDSVLWIWMGD----AAL 117
Query: 323 PCLLPPSGFEI-----HAEI--VMELPIEHGLLLDNLLDLAHAPFTH 362
PP F A I ++ + + L+ DNL+DL+HA F H
Sbjct: 118 AGATPPPSFAFLDKDGWATIRGMLGVGANYELVTDNLMDLSHAEFLH 164
>gi|442318048|ref|YP_007358069.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
gi|441485690|gb|AGC42385.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
Length = 363
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L N WF + S +L D + P V+FRG+ G PG + + C HR PL LG V +G
Sbjct: 22 LPNAWFILCTSRELGDKPLSRTLQGTPLVLFRGEGGKPGALMDRCPHRNVPLSLGRVMQG 81
Query: 268 RIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTAT 321
++QC YHGW + T G+C +P + R+ + S EQ+G IW++ PG EP AT
Sbjct: 82 QLQCGYHGWRFDTGGQCRAIPGFLGEPEARSRCVTSYATREQDGFIWVYSTPGVEP--AT 139
Query: 322 IPCLLPPSGFEIHAEI--VMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
P P + + ++ P L+N LD+ H + H F
Sbjct: 140 EPYRFPLLDAREYTTVRRILRAPGSLHATLENTLDVPHTAYLHGGLF 186
>gi|307107873|gb|EFN56114.1| hypothetical protein CHLNCDRAFT_51738 [Chlorella variabilis]
Length = 553
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 138/370 (37%), Gaps = 75/370 (20%)
Query: 218 WFPVAFSTDLKDDTMEPWVIF-------RGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+PVA + DL D P+ +F R G C Q+ C HR PL G V EG++
Sbjct: 87 WYPVAVAADLPTDRPHPFTLFGRQLVLWRDAAGAWRCFQDACPHRLAPLSEGRVVEGQLV 146
Query: 271 CPYHGWEYSTDGKCEKMP----------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 320
C YHGW + GKC ++P + R + P E G++W+WP P
Sbjct: 147 CSYHGWSFEGTGKCTRVPQAMDERSEAAACGSRRACAATQPTAEAAGLVWVWPDASPGAP 206
Query: 321 TIPCLLPPSGFEIHAEI------------------------VMELPIEHGLLLDNLLDLA 356
P +H ++ V E P +++N+LD
Sbjct: 207 EQAAAAP---LPVHPDLLAGGAGGGATPGSGSFVNIGGGWLVRECPYGFDTMIENILDPG 263
Query: 357 HAPFT-HTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----------MEFRPPCMVL 405
H + H + +VP VK S G+ +EFRPPC V
Sbjct: 264 HVMWAPHGLLGRREDAVPYAVKLQGEISLEGGFATSLGASSRKLEVQRRSLEFRPPCFVR 323
Query: 406 STI-----GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA------- 453
TI G G L + + L +P SR LL S A
Sbjct: 324 QTIAPGELGPGPTGWLPPCHAPSKGSSLVTCGYAVP-SRPGHCLLVTTSYAEAGSGAGGL 382
Query: 454 -SVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWN----LPVGYDKLGVRY 508
+ L VP ++L + ++VL+ DL L+ GQ+ R+ W +P D V +
Sbjct: 383 RAALGLVP--RWLLHVYTQEVLDGDLILLHGQERRLEKAGGSWRSAFFMPTPSDGAVVAF 440
Query: 509 RLWRDALEKG 518
R W D + G
Sbjct: 441 RRWFDDMAGG 450
>gi|170698591|ref|ZP_02889660.1| Vanillate monooxygenase [Burkholderia ambifaria IOP40-10]
gi|170136525|gb|EDT04784.1| Vanillate monooxygenase [Burkholderia ambifaria IOP40-10]
Length = 373
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 106/252 (42%), Gaps = 47/252 (18%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRA 256
+ P + N LKN W+ VA + D D EP V +R DG +++ C HR
Sbjct: 7 TAPKETMNVFLKNAWY-VACTPDEIDGKPLGRKICNEPMVFYRAADGQVAALEDFCPHRG 65
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD 315
PL LG V +G + C YHG E +GK MP ++ I+S P E+ G IW+WPGD
Sbjct: 66 APLSLGFVRDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPVVERYGFIWVWPGD 125
Query: 316 EPPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH-------- 362
+ P LP + H + + ++ L++DNL+DL H + H
Sbjct: 126 A--SEADPARLPALSWADDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKE 183
Query: 363 ----------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPC 402
TS F + P + +GL D P+D F PP
Sbjct: 184 IDEAAPKTTANGDEVVTSRFMQNVMPPPFWQMALRGNGLA---DDVPVDRWQICRFTPPS 240
Query: 403 MVLSTIGISKPG 414
V+ +G++ G
Sbjct: 241 HVMIEVGVAHAG 252
>gi|220908310|ref|YP_002483621.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7425]
gi|219864921|gb|ACL45260.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7425]
Length = 338
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LK FW+PV L+D EP V++ ++G P Q+ C HR+ L +G V EG
Sbjct: 10 LKRFWYPVLPIAQLQDGPKAFTLLDEPLVLWLDQEGKPAATQDRCCHRSAKLSIGQVIEG 69
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTATIP 323
I+CPYHGWE+ G C ++P R + +I + PC E+ G +W+ EPP IP
Sbjct: 70 CIRCPYHGWEFDPQGACVRVPQHPDRPIPSGYRINAYPCQERYGYVWV--CLEPPVQDIP 127
Query: 324 CLLPPS--GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
+ + + L++N LD+AH PF H TF
Sbjct: 128 EFAEATDPNYRLIPGFWETWQCSSLRLMENTLDIAHIPFVHNQTFG 173
>gi|452957702|gb|EME63065.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
ruber BKS 20-38]
Length = 371
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 136/315 (43%), Gaps = 52/315 (16%)
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
P ++R +DG P + + C HR PL +G+ V IQCPYHG ++++ G+C MP+ Q
Sbjct: 44 PLALYRTEDGRPVALADACWHRLAPLSMGTLVGADGIQCPYHGLQFNSAGRCTHMPAQQT 103
Query: 293 RN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI------VMELPIE 344
N + S P E+ +W+WPGD P P +P F++ + +++
Sbjct: 104 INPSAMVASYPVVERHRFVWVWPGD--PMLADPSTIPDM-FQMDSPDWAGDGRTIDVQAN 160
Query: 345 HGLLLDNLLDLAHAPFTHTSTFAKG--------------------W-----SVPSLVKFL 379
+ L+LDNL+DL H F H+S+ + W + P +K +
Sbjct: 161 YQLVLDNLMDLTHEEFVHSSSIGQDELSESDFVVTHDDRTVTVTRWMHDIDAPPFWLKNM 220
Query: 380 TPA-SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSS 438
G +G D + I +EF+ P + +G++K G + R + ++ P
Sbjct: 221 RDKFPGFEGKVDRWQI-IEFQAPSTIRIDVGVAKAGTGAPEGDRSQGVNGFVMNTISPVD 279
Query: 439 RKKTRLLYRMSLDFASVLKHVPFMQYL----WRHFAEQVLNEDLRLVLGQQERM--NNGA 492
R +L F + +++ L R V ED ++ QQ+ + N G
Sbjct: 280 E-------RTALYFWAFMRNYRLDSQLITTQLREGVHGVFGEDEAMLTAQQKAIEANPGH 332
Query: 493 NVWNLPVGYDKLGVR 507
+NL + + VR
Sbjct: 333 EFYNLNIDAGGMWVR 347
>gi|355643018|ref|ZP_09053027.1| vanillate O-demethylase oxygenase subunit [Pseudomonas sp. 2_1_26]
gi|354830018|gb|EHF14077.1| vanillate O-demethylase oxygenase subunit [Pseudomonas sp. 2_1_26]
Length = 351
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 134/335 (40%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L + EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRICDEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDGV 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPG--DEPPTATIPCL 325
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG ++ A IP L
Sbjct: 64 LVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPRL 123
Query: 326 -LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
S + + + ++ L++DNL+DL H + H S+ + + PA+
Sbjct: 124 EWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPATR 178
Query: 385 LQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKPG 414
++G +W D +D F PP VL +G++ G
Sbjct: 179 VEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
Q + + P S + M+ +F + H + R ++
Sbjct: 239 HGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
EDL ++ QQ + L + D GV+ R
Sbjct: 296 GEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|344174888|emb|CCA87514.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
syzygii R24]
Length = 342
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ ++ D + E V +RG++G +++ C HR PL LG V +G
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGERMVFYRGQEGKVAALEDFCPHRGAPLSLGFVRDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGKC MP ++ I+ P E+ G IW+WPGD P P L+
Sbjct: 63 HLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGD--PGQADPALI 120
Query: 327 PP-----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P S + + + ++ L++DNL+DL H + H ++ +
Sbjct: 121 HPLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQ 167
>gi|356514868|ref|XP_003526124.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 540
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 145/332 (43%), Gaps = 43/332 (12%)
Query: 218 WFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P+ + ++ +D + V+F+ +G C ++ C HR L G + +GR++
Sbjct: 90 WYPLYLTLNVPEDAPLGLRVFDKQLVLFKDGNGQFRCYEDRCPHRLAKLSEGQLIDGRLE 149
Query: 271 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF------EQEGMIWIWPGDEPP--TATI 322
C YHGW++ +GKC K+P + KI C + +G+IW+W + P + +
Sbjct: 150 CLYHGWQFEGEGKCVKIPQLPA-DAKIPQAACVKTYEVRDSQGVIWVWMSLKTPPNVSKL 208
Query: 323 PCLLPPSGFEIH-AEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 379
P + E + ELP +H +LL+NL+D AH P +H T AK L +
Sbjct: 209 PWFENFARPEFQDISTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLCFEV 268
Query: 380 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI-SKPGKLEGQNTRQCATHLHQL 431
T + G G+W P + F PC++ + I K G++ + L
Sbjct: 269 TERTHRGFAGWWGREKDGSMPNFLRFEAPCVLQNNREIVDKNGEI---------NYFSGL 319
Query: 432 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ-----QE 486
+C P+ + K+ L+ R S L V F ++ A +V +D+ + Q +E
Sbjct: 320 FLCRPTGQGKSMLIVRFGGTKRSPLAKV-FPKWYLHQNASKVFEQDMGFLSSQNEILLKE 378
Query: 487 RMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
+++ NL D YR W D G
Sbjct: 379 KVSTKELYLNLKSS-DTWVAEYRKWMDKAGHG 409
>gi|429335882|ref|ZP_19216495.1| vanillate O-demethylase oxygenase subunit [Pseudomonas putida
CSV86]
gi|428759451|gb|EKX81751.1| vanillate O-demethylase oxygenase subunit [Pseudomonas putida
CSV86]
Length = 350
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 131/330 (39%), Gaps = 38/330 (11%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + + E V +RG +++ C HR PL LG V +G+
Sbjct: 4 KNAWYVACTPDEIAEKPLGRKICNENMVFYRGDHSRVAALEDFCPHRGAPLSLGFVRDGK 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPCL 325
+ C YHG E +DG+ MP +++ I+S P E+ G IW+WPGD TA IP L
Sbjct: 64 LVCGYHGLEMGSDGRTATMPCQRVQAFPAIRSFPVEERHGFIWVWPGDPARADTALIPNL 123
Query: 326 -LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK------- 377
S + + + ++ L++DNL+DL H + H S+ + + V
Sbjct: 124 HWADSPDWAYGGGLYHIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRVSGDE 183
Query: 378 --------------FLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLEGQ 419
F A G D P+D F PP V+ +G++ G
Sbjct: 184 VITSRFMENILPPPFWQAALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAGTGGYD 243
Query: 420 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 479
C + P S + M+ +F + P + R ++ EDL
Sbjct: 244 APAHCKAGSIVVDFITPESDTSIWYFWGMARNFKA---DDPALTETIRSGQGKIFAEDLE 300
Query: 480 LVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
++ QQ + L + D GV+ R
Sbjct: 301 MLERQQRNLLEHPQRSLLKLNIDAGGVQSR 330
>gi|167645102|ref|YP_001682765.1| vanillate monooxygenase [Caulobacter sp. K31]
gi|167347532|gb|ABZ70267.1| Vanillate monooxygenase [Caulobacter sp. K31]
Length = 350
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 130/314 (41%), Gaps = 50/314 (15%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ + +++K + + + V+FR ++G C+++ C HR PL +G + +
Sbjct: 10 NAWYAAGWDSEIKRELLPRTICNKKIVLFRKENGQAVCLEDACWHRLLPLSMGRLKGDDV 69
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
QC YHG ++ G+C +MPS + N ++S P E+ +WIWPGD P P L+P
Sbjct: 70 QCGYHGLVFNEHGRCVRMPSQETINPSACVRSFPLVERHRFVWIWPGD--PALADPALVP 127
Query: 328 P-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS-- 374
G IHA+ ++ L++DNL+DL H + H S+ +
Sbjct: 128 DLHWNHDPAWAGDGKVIHAK------CDYRLIVDNLMDLTHETYIHGSSIGNDAVAEAPF 181
Query: 375 --------------LVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKL 416
++ P Q P +D + F PC V +G++ G
Sbjct: 182 EVTTGDKTAMVTRWMIDIEPPPFWRQQLGKPGNVDRWQIIRFEAPCTVAIDVGVAPTGTG 241
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 476
+ R + ++ P++ K + D+ + V R +V E
Sbjct: 242 APRGDRSQGVSMVVINTITPATDKTCHYFWANVRDYQLGEQKVTTQI---REAITKVFAE 298
Query: 477 DLRLVLGQQERMNN 490
D +V QQ +++
Sbjct: 299 DEVIVEAQQRAIDD 312
>gi|313109900|ref|ZP_07795830.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
39016]
gi|386063589|ref|YP_005978893.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|310882332|gb|EFQ40926.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
39016]
gi|348032148|dbj|BAK87508.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
NCGM2.S1]
Length = 351
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 134/335 (40%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L + EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRICDEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDGV 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPG--DEPPTATIPCL 325
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG ++ A IP L
Sbjct: 64 LVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPRL 123
Query: 326 -LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
S + + + ++ L++DNL+DL H + H S+ + + PA+
Sbjct: 124 EWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPATR 178
Query: 385 LQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKPG 414
++G +W D +D F PP VL +G++ G
Sbjct: 179 VEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
Q + + P S + M+ +F + H + R ++
Sbjct: 239 HGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDRALTESIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
EDL ++ QQ + L + D GV+ R
Sbjct: 296 GEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|290956056|ref|YP_003487238.1| oxidoreductase subunit alpha [Streptomyces scabiei 87.22]
gi|260645582|emb|CBG68673.1| oxidoreductase alpha subunit [Streptomyces scabiei 87.22]
Length = 351
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 153/347 (44%), Gaps = 48/347 (13%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVNEG 267
+N W+ A++ ++ + + EP V +R ++ G P + + C HR PL ++
Sbjct: 6 RNQWYVAAYAEEVGRELLGRTILGEPLVFYRTEEEGTPVALHDRCVHRRYPLSKSGLDGD 65
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTA---TI 322
RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P A TI
Sbjct: 66 RIVCGYHGFTYDTTGACVYVPGQKRIPRTARVASYPVVEQDSLIWVWIGD-PALADPQTI 124
Query: 323 P---CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH--------------TS 364
P L P + ME + ++GLL+DNLLDL+H + H T+
Sbjct: 125 PRARHLAAPGWTTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAETPITT 181
Query: 365 TFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 415
+G V + + F ++G++G + D+E+ PC+ L I+ G
Sbjct: 182 EVDEGAGVVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYFAPCLYLLHSRIAPVGV 240
Query: 416 L-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
L E + H + PSS K + +S D+A+ V ++L + V+
Sbjct: 241 LPEADGSDPNGFHTEITYAITPSSDGKVYDFWMVSRDWATESDEV--TEFLRGNNHTVVM 298
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY-RLWRDALEKGAK 520
+ + L L Q+ + L + D G+ R+ +E+G K
Sbjct: 299 QDVVALNLLQETLGSERTGYQELSINIDTGGLAARRILARLVEQGEK 345
>gi|403731430|ref|ZP_10949288.1| vanillate demethylase oxygenase subunit [Gordonia rhizosphera NBRC
16068]
gi|403202209|dbj|GAB93619.1| vanillate demethylase oxygenase subunit [Gordonia rhizosphera NBRC
16068]
Length = 371
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 80/145 (55%), Gaps = 12/145 (8%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQ 291
+P ++R DG P + + C HR PL +G+ V +QCPYHG ++++ G+C KMP+ +
Sbjct: 43 KPMALYRTTDGRPVALADACWHRLAPLSMGTLVGSDGVQCPYHGLQFNSAGRCTKMPAQE 102
Query: 292 LRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI------VMELPI 343
N + S P E+ IW+WPGD PT P +P F++ + +++
Sbjct: 103 TINPSAMVASYPVVERHRFIWVWPGD--PTQADPSTIPDM-FQMDSPDWAGDGRTIDVQA 159
Query: 344 EHGLLLDNLLDLAHAPFTHTSTFAK 368
+ L+LDNL+DL H F H+S+ +
Sbjct: 160 NYQLVLDNLMDLTHEEFVHSSSIGQ 184
>gi|392950448|ref|ZP_10316003.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|392950635|ref|ZP_10316190.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|391859410|gb|EIT69938.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|391859597|gb|EIT70125.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
Length = 359
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 131/318 (41%), Gaps = 46/318 (14%)
Query: 210 YNTR-LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHL 261
YN + L N W+ A S++L+ + + P V++R +DG + + C HR PL +
Sbjct: 2 YNGKYLLNTWYVAALSSELESEKLFARTLLDTPVVMYRQRDGAAVALHDRCPHRFSPLSM 61
Query: 262 GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPP 318
G + + CPYHG ++T G+C P K+++ P E+ G IWIW G+ P
Sbjct: 62 GHRDGDNVVCPYHGLRFNTAGQCVHNPHGNGAIPAAAKVRTFPLIERYGFIWIWMGEVPA 121
Query: 319 TAT-IPCLLP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWS 371
A+ +P P P+G A M P + L+ DN++DL+H H + +G
Sbjct: 122 DASALPDYGPIDRGHPNGV---AHTYMRRPCHYELITDNVMDLSHVDHLHGEIISTRGQL 178
Query: 372 VPSLVKFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGI 410
P + K + +W P P + + +R P + TIG
Sbjct: 179 SPKIPKLQEADGEISVHWQWEQTPPIMIFNAFLPEPGASARHFVRVAWRAPTHIQLTIGA 238
Query: 411 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 470
++ T T + LH C P + T + + M+ H
Sbjct: 239 TQDSG--APLTHDACTSQYDLHTCTPETDSTTHYFFATRRNHFEEDAEYNRMKITGMH-- 294
Query: 471 EQVLNEDLRLVLGQQERM 488
+ +NED ++ Q+RM
Sbjct: 295 DAFVNEDGPVLDAVQKRM 312
>gi|33865393|ref|NP_896952.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
WH 8102]
gi|33632562|emb|CAE07374.1| cell death suppressor protein Lls1 homolog [Synechococcus sp. WH
8102]
Length = 455
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 139/330 (42%), Gaps = 81/330 (24%)
Query: 208 QPYNTRLKNFWFPVAFSTDLK------------------DDTMEPWVIFRGKDGIPGCVQ 249
+P + W+P+++ DL D + E W +F
Sbjct: 7 RPMHPTWTEQWWPISYLQDLDPQRPNRFTLLERDLVIWWDQSGESWRVF----------P 56
Query: 250 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP----STQ--LRNVKIKSLPC 302
+ C HR PL G +N+ G+++CPYHGW + DG+C ++P +TQ R + SLP
Sbjct: 57 DVCPHRLVPLSEGRINDAGQLECPYHGWSFDGDGQCRQIPQALENTQPDSRRSRCASLPT 116
Query: 303 FEQEGMIWIWPGDEPPTATIPCLLP--------PSGFEIHAEIVMELPIEHGLLLDNLLD 354
+G++++W G P + P LP P + + + +LP++ LL+N+LD
Sbjct: 117 ASAQGLLFVWMGS--PDSADPEQLPLVPALEENPDSWTVQ-DTFRDLPMDAVTLLENVLD 173
Query: 355 LAHAPFTHTSTFAKGWSVPSLVKFLTP--ASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
++H PFTH T K + + +T ASG + YW+ P +
Sbjct: 174 VSHVPFTHHKTVGKRENAAPVEATITAEDASGFKAYWEEGP------------------R 215
Query: 413 PGKLEGQNTRQCATHL--HQLHV-----------CLPSSRKKTRLLYRMSLDFASVLKHV 459
GKL Q+T A L H L +P R + RL R F S L +
Sbjct: 216 RGKLGAQSTTFLAPQLMWHDLTAKGFGRILTVVYAVPIRRGECRLFARFPFQFQSALPRL 275
Query: 460 PF-MQYLW-RHFAEQVLNEDLRLVLGQQER 487
++ W +H + ED ++ L QER
Sbjct: 276 LIGLRPRWLQHIGNHKVLEDDQVFLHWQER 305
>gi|87199889|ref|YP_497146.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135570|gb|ABD26312.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 356
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 136/339 (40%), Gaps = 46/339 (13%)
Query: 207 VQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLH 260
+P T L+N W+ +++DL + EP +FR G + C HR PL
Sbjct: 12 AKPAATYLRNTWYVAGWASDLAGEPQQRTFLEEPVALFRDGHGEAKAIGGRCPHRFAPLG 71
Query: 261 LGSVNEGRIQCPYHGWEYSTDGKC--EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPP 318
GSV +G + CPYHG + DG+C P L + + + P E+ ++WIW GD
Sbjct: 72 HGSVVDGALMCPYHGLRFDGDGRCVHNPHPGGHLPDARQRVYPLVERHALLWIWMGDAAK 131
Query: 319 T--ATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH----TSTFAKG 369
A+IP L P + V E E L DN+LDL+HA F H S F +G
Sbjct: 132 ADPASIPDFSWLSDPRWEAVRGATVAEGHFE--LYSDNILDLSHANFVHPALVASAFTEG 189
Query: 370 ----WS-----VPSLVKF-------LTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
W V+ ++ G +G + +++ P ++ +P
Sbjct: 190 ERKFWQDGDNVFAEYVRLNDELSVGISAVMGTEGRPQDFYGMVKWHAPAVLYFDFRAGEP 249
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
G R+ T L LH P + T + + D+ L F + R E
Sbjct: 250 G-----TPREQCTLLPSLHAFTPETPDTTHYFWATARDYR--LGDAEFTAGM-RAALEFA 301
Query: 474 LNEDLRLVLGQQERMNNGANVWNLP---VGYDKLGVRYR 509
++ ++ R+ G + W L +G D GVR R
Sbjct: 302 FEQEDMPIIRDSHRLMRGEDFWALRPLILGGDGGGVRAR 340
>gi|399021375|ref|ZP_10723485.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
gi|398092183|gb|EJL82601.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
Length = 350
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 114/278 (41%), Gaps = 41/278 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +RG +G V++ C HR PL LG V +G+
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEKIVFYRGAEGKVAAVEDFCPHRGAPLSLGFVRDGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPCL 325
+ C YHG E DGK MP ++R I+S P E+ G IW+WPG++ A I L
Sbjct: 64 LVCGYHGLEMGCDGKVISMPGQRVRGFPCIRSFPVVERYGFIWVWPGEKELADPAQIHHL 123
Query: 326 LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH---------------------- 362
E + + + E+ L++DNL+DL H + H
Sbjct: 124 EWADNPEWAYGGGLYHINCEYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRTEGDE 183
Query: 363 --TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKL 416
TS F + P + ++GL D P+D F PP V+ +G++ GK
Sbjct: 184 VITSRFMENIMAPPFWRMALRSNGLA---DDVPVDRWQVCHFTPPSHVMIEVGVAHAGKG 240
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 454
Q + P + + M+ +F S
Sbjct: 241 GYDADPQYKASSIVVDFITPETETSHWYFWGMARNFKS 278
>gi|92112477|ref|YP_572405.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
gi|91795567|gb|ABE57706.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
Length = 353
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 45/241 (18%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++++ + E V FR + G V++ C HR PL LG V +G+
Sbjct: 4 KNTWYVACTPDEIEEKPLGRTICNEQIVFFRAEGGQVAAVEDFCPHRGAPLSLGFVRDGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPCL 325
+ C YHG E DGKC MP ++R I + P E+ G IW+WPGD + IP L
Sbjct: 64 LVCGYHGLEMGCDGKCSSMPGQRVRGFPSIHAYPVVERHGFIWVWPGDAEQADPDQIPEL 123
Query: 326 LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
+ E + + + ++ L++DNL+DL H + H S+ + ++ P +
Sbjct: 124 HWANDPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQ-----PEIEEAAPETK 178
Query: 385 LQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISKPG 414
+ G +W D P+D F PP +L +G++ G
Sbjct: 179 VNGDEVLTIRHMENIPAPPFWQSALRGNNLADDVPVDRWQICRFTPPSHILIEVGVAHAG 238
Query: 415 K 415
K
Sbjct: 239 K 239
>gi|359475902|ref|XP_002283433.2| PREDICTED: protein TIC 55, chloroplastic-like [Vitis vinifera]
gi|296082166|emb|CBI21171.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 145/343 (42%), Gaps = 59/343 (17%)
Query: 215 KNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
K W+P+ + D+ +D + V++R + C ++ C HR L G + +G
Sbjct: 91 KEEWYPLYLTKDIPEDAPMGLTVFDKQLVLYRDGKDLLQCYEDRCPHRLAKLSEGQLVDG 150
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
R++C YHGW++ +GKC K+P R+ +K+ + +G++W+W P
Sbjct: 151 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVKTYEVKDSQGVVWVWMSHRTPPN-- 208
Query: 323 PCLLPPSGFEIHA-------EIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVP 373
P LP FE A + ELP +H +LL+NL+D AH P +H T AK
Sbjct: 209 PDKLP--WFENFARPGFRDTSTIHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQ 266
Query: 374 SLVKFLTPAS--GLQGYWDPYPID-----MEFRPPCMVLSTIGISKPGKLEGQNTRQCAT 426
L +T + G G+W + + F PC++ QN R+
Sbjct: 267 PLCFKVTERTDRGFAGWWGREKDESLLNFLRFEAPCVL--------------QNNREIVD 312
Query: 427 ------HLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 480
+ L +C PS + K+ L+ R S + + F ++ + A +V +D+
Sbjct: 313 KNGEKHYFTGLFLCRPSGQGKSMLIVRFGSTKRSPIAKL-FPEWYFHQNAGKVFEQDMGF 371
Query: 481 VLGQ-----QERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
+ Q +E++ NL D YR W D + G
Sbjct: 372 LSSQNEILMKEKVPTKELYLNL-RSSDTWVAEYRRWMDKVGHG 413
>gi|78213302|ref|YP_382081.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9605]
gi|78197761|gb|ABB35526.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9605]
Length = 456
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 139/311 (44%), Gaps = 61/311 (19%)
Query: 218 WFPVAFSTDLKDDTMEPW-------VIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE-GR 268
W+P+++ DL T + VI+ + V + C HR PL G +NE G
Sbjct: 31 WWPISYVQDLDPKTPSRFTLLERDLVIWWDRAASSWRVFPDVCPHRLVPLSEGRINEEGL 90
Query: 269 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIK--SLPCFEQEGMIWIWPGDEPPTATI 322
++CPYHGW + DG+C+++P +TQ N + + SLP ++G++++W G P A
Sbjct: 91 LECPYHGWSFDGDGQCQRVPQALENTQPNNRRSRCASLPTATRQGLLFVWMGA--PDAAD 148
Query: 323 PCLLP--------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 374
P LP P + + + +LP++ LL+N+LD++H PFTH T K +
Sbjct: 149 PSQLPLVPALEDNPDSWTVQ-DTFRDLPMDAVTLLENVLDVSHVPFTHHKTVGKRENAAP 207
Query: 375 LVKFLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL--HQ 430
+ +T ASG YW+ P + GKL Q+T A L H
Sbjct: 208 VEASITGEDASGFTAYWEEGP------------------RRGKLGAQSTTFHAPQLMWHD 249
Query: 431 LHV-----------CLPSSRKKTRLLYRMSLDFASVLKHVPF-MQYLW-RHFAEQVLNED 477
L +P R + RL R F S + + ++ W +H + ED
Sbjct: 250 LTAKGFGRILTVVYAVPIRRGECRLFARFPFQFQSAVPRLLIGLRPRWLQHIGNHKVLED 309
Query: 478 LRLVLGQQERM 488
++ L QER+
Sbjct: 310 DQVFLHWQERV 320
>gi|429197812|ref|ZP_19189686.1| Rieske [2Fe-2S] domain protein [Streptomyces ipomoeae 91-03]
gi|428666507|gb|EKX65656.1| Rieske [2Fe-2S] domain protein [Streptomyces ipomoeae 91-03]
Length = 354
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 47/281 (16%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVNEG 267
+N W+ A++ ++ + + EP V +R ++ G P + + C HR PL ++
Sbjct: 9 RNQWYVAAYAHEVGRELLGRTILGEPLVFYRTEEEGTPVALHDRCVHRRYPLSKSGLDGD 68
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P P
Sbjct: 69 RIVCGYHGFTYDTTGTCVYVPGQKRIPRTARVASYPVVEQDSLIWVWIGD--PALADPQT 126
Query: 326 LP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH--------------T 363
+P P + ME + ++GLL+DNLLDL+H + H T
Sbjct: 127 IPRAKHLDSPGWVTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAETPIT 183
Query: 364 STFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 414
+ +G + + + F ++G++G + D+E+ PC+ L I+ G
Sbjct: 184 TEVDEGAGIVRVSRHMDDAECPPFYAKSTGIEGRITRWQ-DIEYHAPCLYLLHSRIAPVG 242
Query: 415 KL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 454
L E + H + PSS K + +S D+A+
Sbjct: 243 VLPEADGSDPNGFHTEITYAITPSSDGKVYDFWMVSRDWAT 283
>gi|271967869|ref|YP_003342065.1| vanillate demethylase oxygenase subunit [Streptosporangium roseum
DSM 43021]
gi|270511044|gb|ACZ89322.1| vanillate demethylase oxygenase subunit [Streptosporangium roseum
DSM 43021]
Length = 380
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 19/172 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-NE 266
LKNFW+ V F + + +VI+R +DG C+ + C HR L +G++ +
Sbjct: 2 LKNFWYAVEFGHAVGRRPRKVTCLGQDFVIWRRRDGRIACLSDLCVHRGGALSMGTLAGD 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGD-----E 316
I CPYHGWEY DG C K+P+ ++ + P E+ GM+W + GD
Sbjct: 62 DSIACPYHGWEYGPDGGCVKIPANPPGRGIPSKARVDAYPVIERYGMVWAFLGDLPEEER 121
Query: 317 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
PP IP P+ ++ E ++ E L+N++D AH PF H + F
Sbjct: 122 PPIPHIPQHEDPAFRAVYWETTVDANYER--TLENVVDAAHTPFVHGTAFGN 171
>gi|171317347|ref|ZP_02906542.1| Vanillate monooxygenase [Burkholderia ambifaria MEX-5]
gi|171097488|gb|EDT42327.1| Vanillate monooxygenase [Burkholderia ambifaria MEX-5]
Length = 373
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 103/245 (42%), Gaps = 47/245 (19%)
Query: 211 NTRLKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
N LKN W+ VA + D D EP V +R DG +++ C HR PL LG
Sbjct: 14 NVFLKNAWY-VACTPDEIDGKPLGRKICNEPMVFYRAADGQVAALEDFCPHRGAPLSLGF 72
Query: 264 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATI 322
V +G + C YHG E +GK MP ++ I+S P E+ G IW+WPGD +
Sbjct: 73 VRDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPVVERYGFIWVWPGDA--SEAD 130
Query: 323 PCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------- 362
P LP + H + + ++ L++DNL+DL H + H
Sbjct: 131 PARLPALSWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAPPK 190
Query: 363 ---------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIG 409
TS F + P + +GL D P+D F PP V+ +G
Sbjct: 191 TTANGDEVVTSRFMQNVMPPPFWQMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVG 247
Query: 410 ISKPG 414
++ G
Sbjct: 248 VAHAG 252
>gi|395775049|ref|ZP_10455564.1| oxidoreductase subunit alpha [Streptomyces acidiscabies 84-104]
Length = 354
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 47/281 (16%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGK-DGIPGCVQNTCAHRACPLHLGSVNEG 267
+N W+ +A+S ++ + + EP V++R + DG P + + C HR PL ++
Sbjct: 9 RNQWYVMAYSHEVGRELLGRTVLGEPIVVYRTEADGTPVALHDRCVHRRYPLSASGLDGD 68
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
RI C YHG+ Y T G C +P + R ++ + P EQ+ +IW+W GD P P
Sbjct: 69 RIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVAAYPVVEQDSLIWVWIGD--PALADPAA 126
Query: 326 LP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH--------------T 363
+P P + ME + ++GLL+DNLLDL+H + H T
Sbjct: 127 IPRARHLDAPGWTTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAETPIT 183
Query: 364 STFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 414
+ +G + + + F ++G++G + D+E+ PC+ L I+ G
Sbjct: 184 TEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSRIAPVG 242
Query: 415 KL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 454
E + H + PS K + +S D+A+
Sbjct: 243 VAPEADGSDPHGFHTEITYAITPSGDGKVYDFWMVSRDWAT 283
>gi|412985453|emb|CCO18899.1| cell death suppressor protein Lls1-like [Bathycoccus prasinos]
Length = 598
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 139/320 (43%), Gaps = 62/320 (19%)
Query: 218 WFPVAFSTDLKDDT-------MEPWVIFRGK-----DGIP--GCVQNTCAHRACPLHLGS 263
W+P+AF DL+DD P V ++ K D P CV + C HR PL G
Sbjct: 113 WYPIAFECDLEDDAPYAFTLLGTPLVFWKNKKSGASDDAPEYSCVADMCPHRLAPLSEGR 172
Query: 264 VNE-GRIQCPYHGWEY-STDGKCEKMP---------STQLRNVKIKSLPCFEQ--EGMIW 310
+N+ G I+C YHGW + GKC +P T L + + + P + + +G++W
Sbjct: 173 INDKGEIECGYHGWTFEGKSGKCTSIPQLGSEGPAVDTALNSPRACATPYYTKVAQGVLW 232
Query: 311 IWPGDEPPTATIPCLLPPSGFE-------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 363
+P T T+ L P ++ ++ +LP+++ LL+N++D++H PFTH
Sbjct: 233 CYPTKIDGTKTVDDLPPLPLIPELDDPMCVYQDVFRDLPMDYSTLLENVMDVSHVPFTHH 292
Query: 364 STFAKGWSVPSLVKFLTPA------SGLQGYWDPYPID-------MEFRPPCMVLSTIGI 410
++ K + +V LT +G G W P EF+ P ++ T+
Sbjct: 293 NSVGKRENATPVVLELTTEDKKVSRNGFTGEWKEGPRKGKYGTQYTEFQAPALMRHTLRT 352
Query: 411 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY--LWRH 468
+ L + +P + K RL+ R F + L F + + H
Sbjct: 353 DQFTTL-------------TVVYAVPIAPGKCRLIARFPFIFKAALPRKLFGLFPKWYTH 399
Query: 469 FAEQVLNEDLRLVLGQQERM 488
+ + ED ++ L +QER+
Sbjct: 400 TNQNAILEDDQIFLHKQERL 419
>gi|171058019|ref|YP_001790368.1| Rieske (2Fe-2S) domain-containing protein [Leptothrix cholodnii
SP-6]
gi|170775464|gb|ACB33603.1| Rieske (2Fe-2S) domain protein [Leptothrix cholodnii SP-6]
Length = 351
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 129/335 (38%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+ + D + EP V +R G +++ C HR PL LG V EGR
Sbjct: 4 RNAWYVACTPDEFADKPLGRTICGEPLVFYRDGSGAVAALEDFCPHRGAPLSLGRVCEGR 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG E DGK MP ++R I+S P E+ G +W+WPGD LLP
Sbjct: 64 LVCGYHGLEMGCDGKTIAMPGQRVRGFPAIRSFPVIERHGFVWVWPGDA--ARADAALLP 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH-------------------- 362
+ H E + + ++ L++DNL+DL H + H
Sbjct: 122 ALPWADHPEWAYGGGLYNIGCDYRLMIDNLMDLTHETYVHATSIGQKEIDEVPCSTRVDG 181
Query: 363 ----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
TS F G P K +GL D P+D F PP VL +G++ G
Sbjct: 182 DEVITSRFMNGIEAPPFWKMALRMNGLP---DDQPVDRWQICHFTPPSHVLIEVGVALAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
+ + P + + M+ F H P + R ++
Sbjct: 239 HGGHAAPAEVKASSIVVDFITPETDGSIWYFWGMARHFK---PHDPSLTTQIRDGQGRIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
ED ++ QQ + + L + D GV+ R
Sbjct: 296 AEDREMLERQQANLTRWPDRKLLALNIDSGGVQAR 330
>gi|148555930|ref|YP_001263512.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501120|gb|ABQ69374.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 361
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+N W+ A S ++ + P IFR G+ + + C HR PL G+V
Sbjct: 4 RNCWYVAAMSHEIAPGAVISRMICDVPMAIFRSLGGVASILLDRCPHRLYPLSEGTVEAH 63
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP-- 323
++C YHG ++ DG C ++PS N + + P E G+IW+WPGD A+ P
Sbjct: 64 GLRCAYHGLVFAGDGGCREIPSQSEIPANACVTAYPARESHGLIWVWPGDAALAASTPLP 123
Query: 324 ---------------CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
CL P S + + V+ L + L +DNLLDL H F H TF
Sbjct: 124 AFETGEGYLAGLDFSCLDPSSLWGVAGPHVIHLDANYMLAVDNLLDLTHTAFVHAKTF 181
>gi|418243964|ref|ZP_12870392.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 14067]
gi|354511995|gb|EHE84896.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 14067]
Length = 376
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 132/324 (40%), Gaps = 43/324 (13%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQ 291
+P ++R KDG + + C HR PL G V IQCPYHG EY++ G+C KMP+ +
Sbjct: 44 KPLALYRTKDGRAVALADACWHRLAPLSKGKLVGTDGIQCPYHGLEYNSAGRCMKMPAQE 103
Query: 292 LRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-----VMELPIE 344
N + S P E +W+W GD PT P +P H E +
Sbjct: 104 TLNPSAAVNSYPVVEAHRFVWVWLGD--PTLADPTQVPDMHQMSHPEWAGDGRTISADCN 161
Query: 345 HGLLLDNLLDLAHAPFTHTSTFAKG-WSVPSLVKFLTPAS-------------------- 383
+ L+LDNL+DL H F H+S+ + S V T S
Sbjct: 162 YQLVLDNLMDLTHEEFVHSSSIGQDELSESEFVVTHTEDSVTVTRWMHDIDAPPFWQKNM 221
Query: 384 -----GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSS 438
G +G D + I + + P + +G++K G + R + + ++ P S
Sbjct: 222 NDKFPGFEGKVDRWQI-IHYYYPSTICIDVGVAKAGTGAQEGDRSQGVNGYVMNTITPDS 280
Query: 439 RKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM--NNGANVWN 496
+ + + ++ + + R V ED ++ QQ+ + N ++
Sbjct: 281 DRSSHYFWAFMRNYRQESQTITTQL---RDGVSGVFKEDEDMLTAQQDAIDANTDYEFYS 337
Query: 497 LPVGYDKLGVRYRLWRDALEKGAK 520
L + + VR R+ +AL K +
Sbjct: 338 LNIDAGGMWVR-RILEEALSKEGR 360
>gi|148556298|ref|YP_001263880.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501488|gb|ABQ69742.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 348
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTME-------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-N 265
++N W+ +S DL +E P V +R + G P + + C HR PL G +
Sbjct: 4 VRNCWYVALWSEDLHSGAIENRIILSEPVVFYRDQQGQPVALFDICPHRFAPLSKGRLLP 63
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPT-ATI 322
G I C YHG E+ DG C + P ++K P EQ+ +IWIW GD+ P A I
Sbjct: 64 GGGIACGYHGLEFGADGTCIRNPHGDRIPNRAQVKRYPLVEQDSLIWIWMGDQTPDPALI 123
Query: 323 P---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P L P +G+ + + + +P ++ L++DNLLDL+H F H
Sbjct: 124 PRYDFLDPVNGYTVTSRETLTMPCDYRLIVDNLLDLSHINFLHDGILG 171
>gi|456386742|gb|EMF52278.1| oxidoreductase subunit alpha [Streptomyces bottropensis ATCC 25435]
Length = 351
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 129/285 (45%), Gaps = 45/285 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVNEG 267
+N W+ A++ ++ + + EP V +R ++ G P + + C HR PL ++
Sbjct: 6 RNQWYVAAYAEEVGRELLGRTVLGEPLVFYRTEEEGTPVALHDRCVHRRYPLSESGLDGD 65
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTA---TI 322
RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P A TI
Sbjct: 66 RIVCGYHGFTYDTTGACVYVPGQKRIPRTARVASYPVVEQDSLIWVWIGD-PALADPQTI 124
Query: 323 P---CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH--------------TS 364
P L P + ME + ++GLL+DNLLDL+H + H T+
Sbjct: 125 PRARHLAAPGWTTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAETPITT 181
Query: 365 TFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 415
+G V + + F ++G++G + D+E+ PC+ L I+ G
Sbjct: 182 EVDEGAGVVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYFAPCLYLLHSRIAPVGV 240
Query: 416 L-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV 459
L E + H + PSS K + +S D+A+ + V
Sbjct: 241 LPEADGSDPNGFHTEITYAITPSSDGKVYDFWMVSRDWATESEEV 285
>gi|121605619|ref|YP_982948.1| Rieske (2Fe-2S) domain-containing protein [Polaromonas
naphthalenivorans CJ2]
gi|120594588|gb|ABM38027.1| Rieske (2Fe-2S) domain protein [Polaromonas naphthalenivorans CJ2]
Length = 354
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 134/335 (40%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ D+ D + E V +R ++G +++ C HR PL LG V+EG+
Sbjct: 4 KNTWYVACTPQDIDDKPLGRKICGERIVFYRAQEGRVAALEDFCPHRGAPLSLGFVSEGK 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG E DGK MP ++R +I+S P E+ G IW+WPGD P +P
Sbjct: 64 LVCGYHGLEMGCDGKTIAMPGQRVRGFPQIRSYPVEERYGFIWVWPGDA--AQADPAKIP 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH-------------------- 362
+ + E + + ++ L++DNL+DL H + H
Sbjct: 122 HQDWYENPEWAYGGGMFHIHCDYRLMIDNLMDLTHETYVHSGSIGQKEIDEVPCKTTVNG 181
Query: 363 ----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
TS F + P K + L D P+D F PP V+ +G++ G
Sbjct: 182 DEVVTSRFMENIMPPPFWKLALRGNNLA---DDVPVDRWQICRFTPPSHVMIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
+ + P + + M+ F K + R ++
Sbjct: 239 MGGYDAPPDHKAYSIVVDFITPETETSIWYFWGMARKFNPRDKA---LTATIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+EDL ++ QQ+ + + L + D GV+ R
Sbjct: 296 SEDLEMLQRQQQNLLDYPERALLKLNIDAGGVQSR 330
>gi|295700273|ref|YP_003608166.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295439486|gb|ADG18655.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 352
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 18/174 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ V +S++ + EP ++R DG +++ C HR PL +G
Sbjct: 4 LRNCWYMVGWSSEFSATDIVPFTVMDEPLALYRKDDGTLVALEDLCPHRLAPLTVGRKEG 63
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YHG +++ DG+C ++P + + K ++S P E+ G W+W GD P A +
Sbjct: 64 DELRCMYHGLKFAADGRCTEIPGQERISSKVCVRSYPIEEKHGAAWVWMGD-PAKADVAL 122
Query: 325 LLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 372
+ P G + + ++ VM E L+ DNLLDL+HAPF H STF V
Sbjct: 123 IPPIEGPDSDTYSMVCSKFVMNGNAE--LVADNLLDLSHAPFIHESTFGANNKV 174
>gi|89899097|ref|YP_521568.1| Rieske (2Fe-2S) protein [Rhodoferax ferrireducens T118]
gi|89343834|gb|ABD68037.1| Rieske (2Fe-2S) protein [Rhodoferax ferrireducens T118]
Length = 351
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 130/314 (41%), Gaps = 48/314 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ A ++ + + E +RG++ V++ C HR PL LG V+EG+
Sbjct: 4 KNTWYVAATPNEIDEKPLGRTICGERIAFYRGEENKVAAVEDFCPHRGAPLSLGYVSEGK 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPCL 325
+ C YHG E GK MP ++R IK+ P E+ G IW+WPGD + A IP +
Sbjct: 64 LVCGYHGLEMGCQGKTIAMPGQRVRGFPAIKAYPVVERYGFIWVWPGDAAQADEAKIPHM 123
Query: 326 LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH---------------------- 362
E + + + ++ L++DNL+DL H + H
Sbjct: 124 AWYDNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDETPCKTTVEGDT 183
Query: 363 --TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK- 415
TS F G P + A+ L D P+D F PP V+ +G++ G
Sbjct: 184 VVTSRFMSGIQPPPFWQMALRANHLA---DDVPVDRWQICRFTPPSHVMIEVGVAHQGHG 240
Query: 416 -LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
+ N ++ + + + P + + M+ F K + R ++
Sbjct: 241 GYDAPNDKKAYSVV--VDFITPETETSIHYFWGMARKFNPADKA---LTASIREGQGKIF 295
Query: 475 NEDLRLVLGQQERM 488
EDL ++ QQ+ +
Sbjct: 296 GEDLEMLERQQQNL 309
>gi|428210223|ref|YP_007094576.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428012144|gb|AFY90707.1| Rieske (2Fe-2S) iron-sulfur domain protein [Chroococcidiopsis
thermalis PCC 7203]
Length = 364
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 131/320 (40%), Gaps = 68/320 (21%)
Query: 216 NFWFPVAFSTDLKDDTMEP---W----VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+PV ++ L+ + P W +FR DG + + CAH+ LH G +
Sbjct: 24 DYWYPVGWANKLQPGHIMPVTIWKQAIAVFRDTDGQLHALDDACAHKGVALHKGQIQGKH 83
Query: 269 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP- 323
+ CPYHGWE++ G+C K+P + +L +++S P E+ +IWI+PGD +IP
Sbjct: 84 LLCPYHGWEFNGAGQCVKIPYLPETHKLPCAQVRSYPVREKYNLIWIFPGDASLATSIPL 143
Query: 324 ----------CLLP--PSGFEIHAEIVME--LPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
CL+ P+ F+ H I E + + HG L NL +G
Sbjct: 144 PEIPEFDDPDCLMVPIPAHFQAHFTICNENTMDVFHGFLHKNL---------------QG 188
Query: 370 WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 429
W P L T S + D ++ +G+S G + TR H
Sbjct: 189 WFDPVLTSLKTTESSVHA-------DYRVSYKGVMTKILGLSDRG--DEVTTRTVTLHYQ 239
Query: 430 QLH-----------------VCLPSSRKKTRLLYRMSLDFASVLKHVPFMQ-YLWRHFAE 471
H + ++ T + R++L V P + Y+WR
Sbjct: 240 YPHYHSSLEGVSSLYLMRSPMGATETKSFTLMFLRLNLPKWLVQPFKPLISAYIWRFLFS 299
Query: 472 QVLNEDLRLVLGQQERMNNG 491
+ L++D+ ++ +Q +N
Sbjct: 300 KFLDQDIEMMESEQRTYSNN 319
>gi|254574850|pdb|3GKE|A Chain A, Crystal Structure Of Dicamba Monooxygenase
gi|254574851|pdb|3GKE|B Chain B, Crystal Structure Of Dicamba Monooxygenase
gi|254574852|pdb|3GKE|C Chain C, Crystal Structure Of Dicamba Monooxygenase
gi|254839314|pdb|3GB4|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839315|pdb|3GB4|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839316|pdb|3GB4|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839346|pdb|3GOB|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839347|pdb|3GOB|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839348|pdb|3GOB|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839356|pdb|3GTE|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839357|pdb|3GTE|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839358|pdb|3GTE|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839359|pdb|3GTS|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|254839360|pdb|3GTS|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|254839361|pdb|3GTS|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|255311844|pdb|3GL0|A Chain A, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311845|pdb|3GL0|B Chain B, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311846|pdb|3GL0|C Chain C, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311847|pdb|3GL2|A Chain A, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
gi|255311848|pdb|3GL2|B Chain B, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
gi|255311849|pdb|3GL2|C Chain C, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
Length = 349
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 53/315 (16%)
Query: 212 TRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
T ++N W+ A +L + + P ++R DG+ + + C HR PL G +
Sbjct: 3 TFVRNAWYVAALPEELSEKPLGRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDGILV 62
Query: 266 EGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
G +QCPYHG E+ G+C P + ++ ++S P E++ +IWIWPGD P
Sbjct: 63 NGHLQCPYHGLEFDGGGQCVHNPHGNGARPASLNVRSFPVVERDALIWIWPGD--PALAD 120
Query: 323 PCLLPPSGFEIHAEIVM-----ELPIEHGLLLDNLLDLAHAPFTH-----TSTFAK---- 368
P +P G + + + LL+DNL+DL HA + H T F +
Sbjct: 121 PGAIPDFGCRVDPAYRTVGGYGHVDCNYKLLVDNLMDLGHAQYVHRANAQTDAFDRLERE 180
Query: 369 ----------------GWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
G + KFL A+ W+ D+ + +L+ I ++
Sbjct: 181 VIVGDGEIQALMKIPGGTPSVLMAKFLRGANTPVDAWN----DIRWNKVSAMLNFIAVAP 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
G + Q + H H+ P + + S +F P M + R + Q
Sbjct: 237 EGTPKEQ-----SIHSRGTHILTPETEASCHYFFGSSRNFGI---DDPEMDGVLRSWQAQ 288
Query: 473 VLNEDLRLVLGQQER 487
L ++ ++V+ ER
Sbjct: 289 ALVKEDKVVVEAIER 303
>gi|55584974|gb|AAV53699.1| DdmC [Stenotrophomonas maltophilia]
Length = 339
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 53/315 (16%)
Query: 212 TRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
T ++N W+ A +L + + P ++R DG+ + + C HR PL G +
Sbjct: 2 TFVRNAWYVAALPEELSEKPLGRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDGILV 61
Query: 266 EGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
G +QCPYHG E+ G+C P + ++ ++S P E++ +IWIWPGD P
Sbjct: 62 NGHLQCPYHGLEFDGGGQCVHNPHGNGARPASLNVRSFPVVERDALIWIWPGD--PALAD 119
Query: 323 PCLLPPSGFEIHAEIVM-----ELPIEHGLLLDNLLDLAHAPFTH-----TSTFAK---- 368
P +P G + + + LL+DNL+DL HA + H T F +
Sbjct: 120 PGAIPDFGCRVDPAYRTVGGYGHVDCNYKLLVDNLMDLGHAQYVHRANAQTDAFDRLERE 179
Query: 369 ----------------GWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
G + KFL A+ W+ D+ + +L+ I ++
Sbjct: 180 VIVGDGEIQALMKIPGGTPSVLMAKFLRGANTPVDAWN----DIRWNKVSAMLNFIAVAP 235
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
G + Q + H H+ P + + S +F P M + R + Q
Sbjct: 236 EGTPKEQ-----SIHSRGTHILTPETEASCHYFFGSSRNFGI---DDPEMDGVLRSWQAQ 287
Query: 473 VLNEDLRLVLGQQER 487
L ++ ++V+ ER
Sbjct: 288 ALVKEDKVVVEAIER 302
>gi|347528222|ref|YP_004834969.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136903|dbj|BAK66512.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 373
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ AFS ++ + + + +I+R G P +Q+ C HR PL LG
Sbjct: 5 LENVWYAAAFSDEVGEKPLARKLLDQDLMIYRDSAGRPILLQDRCPHRFAPLSLGKTVGD 64
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
I+CPYHG + G C P + LR +++ P E+ G++W WPGD P
Sbjct: 65 EIECPYHGLRFDRTGACSHNPHMKGGGPLRAAAVRAYPVMEKYGILWFWPGD--PGFADE 122
Query: 324 CLLPPSGFEIHAEI------VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
+LP F + ++ + + L++DNLLDL+HA F H KG
Sbjct: 123 AILPKVKFLEETDRYRLVKGLLHVEGNYQLVIDNLLDLSHAQFIHPGFAIKG 174
>gi|421520559|ref|ZP_15967223.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida LS46]
gi|402755621|gb|EJX16091.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida LS46]
Length = 355
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 125/314 (39%), Gaps = 48/314 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + E V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKIVFYRARENQVAAVEDFCPHRGAPLSLGYVEDGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+P
Sbjct: 64 LVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALIP 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------- 368
+ ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 HLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVTG 181
Query: 369 ----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
P + +GL D P+D F PP VL +G++ G
Sbjct: 182 DEVVTARHMENLMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
K Q + P S + M+ +FA+ H + R ++
Sbjct: 239 KGGYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKIF 295
Query: 475 NEDLRLVLGQQERM 488
+EDL ++ QQ+ +
Sbjct: 296 SEDLEMLERQQQNL 309
>gi|145296350|ref|YP_001139171.1| hypothetical protein cgR_2265 [Corynebacterium glutamicum R]
gi|417971133|ref|ZP_12612061.1| hypothetical protein CgS9114_08886 [Corynebacterium glutamicum
S9114]
gi|140846270|dbj|BAF55269.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044612|gb|EGV40288.1| hypothetical protein CgS9114_08886 [Corynebacterium glutamicum
S9114]
Length = 376
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 148/368 (40%), Gaps = 53/368 (14%)
Query: 196 LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDD-------TMEPWVIFRGKDGIPGCV 248
L ++L + + P+ N W+ A+ ++ +P ++R KDG +
Sbjct: 3 LSERNLTTTAKILPHPL---NAWYVAAWDYEVTSKKPMARTIANKPLALYRTKDGRAVAL 59
Query: 249 QNTCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQ 305
+ C HR PL G V IQCPYHG EY++ G+C KMP+ + N + S P E
Sbjct: 60 ADACWHRLAPLSKGKLVGTDGIQCPYHGLEYNSAGRCMKMPAQETLNPSAAVNSYPVVEA 119
Query: 306 EGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPF 360
+W+W GD PT P +P H E + + L+LDNL+DL H F
Sbjct: 120 HRFVWVWLGD--PTLADPTQVPDMHQMSHPEWAGDGRTISADCNYQLVLDNLMDLTHEEF 177
Query: 361 THTSTFAKG-WSVPSLVKFLTPAS-------------------------GLQGYWDPYPI 394
H+S+ + S V T S G +G D + I
Sbjct: 178 VHSSSIGQDELSESEFVVTHTEDSVTVTRWMHDIDAPPFWQKNMNDKFPGFEGKVDRWQI 237
Query: 395 DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 454
+ + P + +G++K G + R + + ++ P S + + + ++
Sbjct: 238 -IHYYYPSTICIDVGVAKAGTGAQEGDRSQGVNGYVMNTITPESDRSSHYFWAFMRNYR- 295
Query: 455 VLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWR 512
L+ L R V ED ++ QQ+ + N ++L + + VR R+
Sbjct: 296 -LESQTITTQL-RDGVSGVFKEDEDMLTAQQDAIDANTDYEFYSLNIDAGGMWVR-RILE 352
Query: 513 DALEKGAK 520
+AL K +
Sbjct: 353 EALSKEGR 360
>gi|19553582|ref|NP_601584.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Corynebacterium glutamicum ATCC 13032]
gi|62391226|ref|YP_226628.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 13032]
gi|21325154|dbj|BAB99776.1| Ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenases [Corynebacterium glutamicum ATCC 13032]
gi|41326566|emb|CAF21048.1| PROBABLE VANILLATE O-DEMETHYLASE OXYGENASE SUBUNIT [Corynebacterium
glutamicum ATCC 13032]
gi|385144481|emb|CCH25520.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Corynebacterium glutamicum K051]
Length = 376
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 133/324 (41%), Gaps = 43/324 (13%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQ 291
+P ++R KDG + + C HR PL G V IQCPYHG EY++ G+C KMP+ +
Sbjct: 44 KPLALYRTKDGRAVALADACWHRLAPLSKGKLVGTDGIQCPYHGLEYNSAGRCMKMPAQE 103
Query: 292 LRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-----VMELPIE 344
N + S P E +W+W GD PT P +P H E +
Sbjct: 104 TLNPSAAVNSYPVVEAHRFVWVWLGD--PTLADPTQVPDMHQMSHPEWAGDGRTISADCN 161
Query: 345 HGLLLDNLLDLAHAPFTHTSTFAKG-WSVPSLVKFLTPAS-------------------- 383
+ L+LDNL+DL H F H+S+ + S V T S
Sbjct: 162 YQLVLDNLMDLTHEEFVHSSSIGQDELSESEFVVTHTEDSVTVTRWMHDIDAPPFWQKNM 221
Query: 384 -----GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSS 438
G +G D + I + + P + +G++K G + R + + ++ P S
Sbjct: 222 NDKFPGFEGKVDRWQI-IHYYYPSTICIDVGVAKAGTGAQEGDRSQGVNGYVMNTITPDS 280
Query: 439 RKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM--NNGANVWN 496
+ + + ++ L+ L R V ED ++ QQ+ + N ++
Sbjct: 281 DRSSHYFWAFMRNYR--LESQTITTQL-RDGVSGVFKEDEDMLTAQQDAIDANTDYEFYS 337
Query: 497 LPVGYDKLGVRYRLWRDALEKGAK 520
L + + VR R+ +AL K +
Sbjct: 338 LNIDAGGMWVR-RILEEALSKEGR 360
>gi|206564276|ref|YP_002235039.1| vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
J2315]
gi|444357697|ref|ZP_21159217.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
gi|444370803|ref|ZP_21170432.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198040316|emb|CAR56301.1| vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
J2315]
gi|443596789|gb|ELT65271.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|443605882|gb|ELT73697.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
Length = 359
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 103/242 (42%), Gaps = 47/242 (19%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LKN W+ VA + D D E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRATDGQVAALEDFCPHRGAPLSLGVVRD 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD P+ P
Sbjct: 62 GVLVCGYHGLEMGCNGKTAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGD--PSEADPAK 119
Query: 326 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 362
LP + H + + ++ L++DNL+DL H + H
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPKTTS 179
Query: 363 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISK 412
TS F + P + +GL D P+D F PP V+ +G++
Sbjct: 180 HGDEVVTSRFMENVMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVAH 236
Query: 413 PG 414
G
Sbjct: 237 AG 238
>gi|91789243|ref|YP_550195.1| Rieske (2Fe-2S) domain-containing protein [Polaromonas sp. JS666]
gi|91698468|gb|ABE45297.1| vanillate demethylase subunit A [Polaromonas sp. JS666]
Length = 369
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 110/237 (46%), Gaps = 41/237 (17%)
Query: 216 NFWFPVAFSTDL------KDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++ + + V+FR DG +++ C HR PL +G ++ +
Sbjct: 11 NAWYAAAYDVEVVRALLPRTICKQKLVMFRKTDGTVAALEDACWHRLLPLSMGRLDGDEL 70
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG Y+ G+C MPS + N +++ P E+ +W+WPGD P P L+P
Sbjct: 71 TCGYHGLVYNAQGRCTHMPSQETLNPSACVRAYPVLEKHRFVWVWPGD--PAKADPALVP 128
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------GW 370
+ AE ++++ ++ L++DNL+DL H F H+S+ + G
Sbjct: 129 DLHWNDDAEWAGDGKMIKVKCDYRLVVDNLMDLTHETFVHSSSIGQRAVAEAPFVATHGD 188
Query: 371 SVPSLVKFL-------------TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 414
++ +++ + G QG D + + ++F PC V +G+++ G
Sbjct: 189 RTATVTRWMENIDAPPFWAGQINHSLGYQGPVDRWQV-IKFEAPCTVTIDVGVAEAG 244
>gi|148547249|ref|YP_001267351.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida F1]
gi|395448724|ref|YP_006388977.1| Rieske domain-containing protein [Pseudomonas putida ND6]
gi|148511307|gb|ABQ78167.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida F1]
gi|388562721|gb|AFK71862.1| Rieske domain-containing protein [Pseudomonas putida ND6]
Length = 355
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 125/314 (39%), Gaps = 48/314 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + E V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKIVFYRARENQVAAVEDFCPHRGAPLSLGYVEDGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+P
Sbjct: 64 LVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALIP 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------- 368
+ ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 HLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVTG 181
Query: 369 ----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
P + +GL D P+D F PP VL +G++ G
Sbjct: 182 DEVVTARHMENIMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
K Q + P S + M+ +FA+ H + R ++
Sbjct: 239 KGGYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKIF 295
Query: 475 NEDLRLVLGQQERM 488
+EDL ++ QQ+ +
Sbjct: 296 SEDLEMLERQQQNL 309
>gi|296391741|ref|ZP_06881216.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PAb1]
gi|416874050|ref|ZP_11917881.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
152504]
gi|334843898|gb|EGM22480.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
152504]
Length = 351
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 132/335 (39%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L + EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRICDEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDGV 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPCL 325
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP L
Sbjct: 64 LVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGTEEQADAALIPRL 123
Query: 326 -LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 124 EWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTTR 178
Query: 385 LQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKPG 414
++G +W D +D F PP VL +G++ G
Sbjct: 179 VEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
Q + + P S + M+ +F + H + R ++
Sbjct: 239 HGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
EDL ++ QQ + L + D GV+ R
Sbjct: 296 GEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|410684123|ref|YP_006060130.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum CMR15]
gi|299068612|emb|CBJ39846.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum CMR15]
Length = 342
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 107/239 (44%), Gaps = 39/239 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ ++ D + E V +RG++G +++ C HR PL LG V +G
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGERMVFYRGQEGTVAALEDFCPHRGAPLSLGFVRDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGKC MP ++ I+ P E+ G IW+WPGD P P L+
Sbjct: 63 HLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGD--PEQADPALI 120
Query: 327 -----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 368
S + + + + L++DNL+DL H + H ++ +
Sbjct: 121 HHLEWAESEAWAYGGGLYHIQCGYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTKVE 180
Query: 369 GWSVPS--LVKFLTP----ASGLQ--GYWDPYPID----MEFRPPCMVLSTIGISKPGK 415
G +V + ++ + P A+ L+ G D P D F PP VL +G++ GK
Sbjct: 181 GDAVVTSRFMENIMPPPFWATALRGAGLADDVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|116053053|ref|YP_793372.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218893999|ref|YP_002442868.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
LESB58]
gi|254238378|ref|ZP_04931701.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
C3719]
gi|392986580|ref|YP_006485167.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
DK2]
gi|416856399|ref|ZP_11912016.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
138244]
gi|420142098|ref|ZP_14649727.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
CIG1]
gi|421156423|ref|ZP_15615870.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 14886]
gi|421163497|ref|ZP_15622207.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 25324]
gi|421170716|ref|ZP_15628644.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 700888]
gi|421177160|ref|ZP_15634816.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
CI27]
gi|451986046|ref|ZP_21934240.1| Probable vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas aeruginosa 18A]
gi|115588274|gb|ABJ14289.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126170309|gb|EAZ55820.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
C3719]
gi|218774227|emb|CAW30044.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
LESB58]
gi|334841960|gb|EGM20577.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
138244]
gi|392322085|gb|AFM67465.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
DK2]
gi|403245161|gb|EJY58988.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
CIG1]
gi|404519067|gb|EKA29852.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 14886]
gi|404522544|gb|EKA33037.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 700888]
gi|404528514|gb|EKA38597.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 25324]
gi|404529804|gb|EKA39824.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
CI27]
gi|451756295|emb|CCQ86763.1| Probable vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas aeruginosa 18A]
gi|453046414|gb|EME94130.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PA21_ST175]
Length = 351
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 133/335 (39%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L + EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRICDEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDGV 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPG--DEPPTATIPCL 325
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG ++ A IP L
Sbjct: 64 LVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPRL 123
Query: 326 -LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 124 EWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTTR 178
Query: 385 LQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKPG 414
++G +W D +D F PP VL +G++ G
Sbjct: 179 VEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
Q + + P S + M+ +F + H + R ++
Sbjct: 239 HGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
EDL ++ QQ + L + D GV+ R
Sbjct: 296 GEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|397694476|ref|YP_006532357.1| rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
DOT-T1E]
gi|397331206|gb|AFO47565.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
DOT-T1E]
Length = 355
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 132/335 (39%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + E V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKIVFYRARENQVAAVEDFCPHRGAPLSLGYVEDGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+P
Sbjct: 64 LVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALIP 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------- 368
+ ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 HLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVTG 181
Query: 369 ----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
P + +GL D P+D F PP VL +G++ G
Sbjct: 182 DEVVTARHMENIMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
K Q + P S + M+ +FA+ H + R ++
Sbjct: 239 KGGYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+EDL ++ QQ+ + L + D GV+ R
Sbjct: 296 SEDLEMLERQQQNLLAHPERNLLKLNIDAGGVQSR 330
>gi|298491713|ref|YP_003721890.1| pheophorbide a oxygenase ['Nostoc azollae' 0708]
gi|298233631|gb|ADI64767.1| Pheophorbide a oxygenase ['Nostoc azollae' 0708]
Length = 442
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 149/345 (43%), Gaps = 52/345 (15%)
Query: 218 WFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 267
W+P++ DL P VI++ +D V + C HR PL G V++ G
Sbjct: 11 WYPLSPVEDLDSPRPVPVTLLGIRLVIWKPRDADNYRVFLDQCPHRLAPLSEGRVDDKTG 70
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPP- 318
+ C YHGW++ G C +P + +N + SLP ++ ++W+WP +
Sbjct: 71 NLMCSYHGWQFDGRGICTHIPQAENPQLVAKNQQNFCVLSLPVRQENDLLWVWPDAKSAE 130
Query: 319 -TATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---KG 369
AT P L P GF + + + +L + L++N+ D +H PF+H K
Sbjct: 131 LAATTPLPLSPHIDTNKGF-VWSSYIRDLEYDWQTLVENVADPSHVPFSHHGVQGNRDKA 189
Query: 370 WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 429
S+P V T P + F+PPC++ I I K G
Sbjct: 190 TSIPLNVVQSTINLIEVSISKALPTTITFQPPCLLEYAISIGDTDKKLG----------- 238
Query: 430 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRL------V 481
+ C+P S K+R++ + + +FA L ++ + W H + VL+ D+ L +
Sbjct: 239 LIVYCVPVSPGKSRIVAQFTRNFAKNLHYL--IPRWWEHIKIRNLVLDGDMMLLHQQEYL 296
Query: 482 LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 526
L Q++ + + LP D+L + +R W D G QLP+ K
Sbjct: 297 LQQRQESESWKTAYKLPTSADRLVIEFRTWFDKYCHG--QLPWSK 339
>gi|421182982|ref|ZP_15640450.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
E2]
gi|404541080|gb|EKA50455.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
E2]
Length = 351
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 133/335 (39%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L + EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRICDEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDGV 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPG--DEPPTATIPCL 325
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG ++ A IP L
Sbjct: 64 LVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPRL 123
Query: 326 -LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 124 EWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTTR 178
Query: 385 LQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKPG 414
++G +W D +D F PP VL +G++ G
Sbjct: 179 VEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
Q + + P S + M+ +F + H + R ++
Sbjct: 239 HGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGRIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
EDL ++ QQ + L + D GV+ R
Sbjct: 296 GEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|427730536|ref|YP_007076773.1| Rieske (2Fe-2S) domain-containing protein [Nostoc sp. PCC 7524]
gi|427366455|gb|AFY49176.1| Rieske (2Fe-2S) domain-containing protein [Nostoc sp. PCC 7524]
Length = 443
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 145/347 (41%), Gaps = 60/347 (17%)
Query: 218 WFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 267
W+PV+ DL P VI++ K V + C HR PL G ++E G
Sbjct: 11 WYPVSPIEDLDPQKPTPVTVLGLRLVIWKPKSSETYRVFLDQCPHRLAPLSEGRIDEQTG 70
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPPT 319
+ C YHGW++ G C ++P + N + +LP + ++W+W + P
Sbjct: 71 NLMCSYHGWQFDAQGTCTQIPQAENPELVTKNQNNFCVTTLPVRQANDLLWVWLDAQSPE 130
Query: 320 ATIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH---TSTFAKG 369
LP S GF + + V +L + L++N+ D +H PF H K
Sbjct: 131 LAAAQALPLSPQVDANKGF-VWSSFVRDLEYDWQTLVENVADPSHVPFAHHGVQGNREKA 189
Query: 370 WSVP-SLVKF---LTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCA 425
+P S+V+ L A G + + F PPC + I GK G T
Sbjct: 190 RPIPISIVQSTANLIEAVTTGG----FQTKITFEPPCRLEYAISFGDAGKQVGLIT---- 241
Query: 426 THLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLV-- 481
C+P + K+R++ + + +FA L F+ W H + VL+ D+ L+
Sbjct: 242 -------YCIPVAPGKSRIVAQFTRNFAKTLHR--FIPRWWDHITNRNAVLDGDMILLQQ 292
Query: 482 ----LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
L Q++ + + LP D+L + +R W D +G QLP+
Sbjct: 293 QEYFLQQKQLTESWKTAYQLPTSADRLVIEFRKWFDVYCRG--QLPW 337
>gi|386011602|ref|YP_005929879.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
BIRD-1]
gi|313498308|gb|ADR59674.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
BIRD-1]
Length = 355
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 125/314 (39%), Gaps = 48/314 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + E V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKIVFYRARENQVAAVEDFCPHRGAPLSLGYVEDGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+P
Sbjct: 64 LVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--ALADPALIP 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------- 368
+ ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 HLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVTG 181
Query: 369 ----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
P + +GL D P+D F PP VL +G++ G
Sbjct: 182 DEVVTARHMENIMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
K Q + P S + M+ +FA+ H + R ++
Sbjct: 239 KGGYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKIF 295
Query: 475 NEDLRLVLGQQERM 488
+EDL ++ QQ+ +
Sbjct: 296 SEDLEMLERQQQNL 309
>gi|386844703|ref|YP_006249761.1| alpha-subunit oxygenase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374105004|gb|AEY93888.1| alpha-subunit oxygenase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451797996|gb|AGF68045.1| alpha-subunit oxygenase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 354
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 48/342 (14%)
Query: 209 PYNTRL-KNFWFPVAFSTDLKDDTM------EPWVIFRGKD-GIPGCVQNTCAHRACPLH 260
P+ T +N W+ A+S ++ + + EP V +R +D G + + C HR PL
Sbjct: 2 PHTTAFARNQWYVAAYSHEVGRELLGRTILGEPLVFYRAEDDGTAVALADRCVHRRFPLS 61
Query: 261 LGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE-- 316
++ RI C YHG+ Y T G C +P + R ++ S P EQ+ ++W+W GD
Sbjct: 62 ESRLDGDRIVCGYHGFTYDTTGACVYVPGQKRVPRTARVASYPVVEQDSLVWVWIGDPAL 121
Query: 317 PPTATI---PCLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH---------- 362
TI P L P + ME + ++GLL+DNLLDL+H + H
Sbjct: 122 ADAGTIPRAPHLDSPDWVTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVA 178
Query: 363 ----TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 409
T+ +G + + + F ++G++G + D+E+ PC+ L
Sbjct: 179 ETPITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSR 237
Query: 410 ISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRH 468
I+ G L E H + PS+ K + +S DFA + V R
Sbjct: 238 IAPVGVLPEPDGGDPNGFHTEITYAITPSTDGKVFDFWAVSRDFAKDDEEV---TTFLRD 294
Query: 469 FAEQVLNEDL-RLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
F V+ +D+ L L Q+ A L + D G+ R
Sbjct: 295 FNHTVVMQDVDALNLLQRTLGTERAGYQELSINIDTGGLAAR 336
>gi|15600097|ref|NP_253591.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa PAO1]
gi|418583022|ref|ZP_13147093.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa MPAO1/P1]
gi|418592188|ref|ZP_13156064.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa MPAO1/P2]
gi|421519468|ref|ZP_15966139.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa PAO579]
gi|9951180|gb|AAG08289.1|AE004903_7 vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PAO1]
gi|375047629|gb|EHS40172.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa MPAO1/P1]
gi|375049014|gb|EHS41525.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa MPAO1/P2]
gi|404345387|gb|EJZ71739.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa PAO579]
Length = 351
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 132/335 (39%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L + EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRICDEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDGV 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--ATIPCL 325
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP L
Sbjct: 64 LVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADDALIPRL 123
Query: 326 -LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 124 EWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTTR 178
Query: 385 LQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKPG 414
++G +W D +D F PP VL +G++ G
Sbjct: 179 VEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
Q + + P S + M+ +F + H + R ++
Sbjct: 239 HGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
EDL ++ QQ + L + D GV+ R
Sbjct: 296 GEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|49086646|gb|AAT51369.1| PA4904, partial [synthetic construct]
Length = 352
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 132/335 (39%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L + EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRICDEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDGV 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--ATIPCL 325
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP L
Sbjct: 64 LVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADDALIPRL 123
Query: 326 -LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 124 EWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTTR 178
Query: 385 LQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKPG 414
++G +W D +D F PP VL +G++ G
Sbjct: 179 VEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
Q + + P S + M+ +F + H + R ++
Sbjct: 239 HGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
EDL ++ QQ + L + D GV+ R
Sbjct: 296 GEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|428211927|ref|YP_007085071.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoria acuminata PCC 6304]
gi|428000308|gb|AFY81151.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoria acuminata PCC 6304]
Length = 469
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 139/352 (39%), Gaps = 63/352 (17%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLK------------------DDTMEPWVIFRGKDGIPG 246
G P+ ++ W+PV + DL D T + W F K
Sbjct: 20 GGNDPHRFDVREVWYPVYYLQDLDKSKIMRFTLLGVDLAIWWDKTGQSWRAFEDK----- 74
Query: 247 CVQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIK 298
C HR PL G +NE G I+CPYHGW +S GKCE +P + Q ++
Sbjct: 75 -----CPHRLAPLSEGRINEQGWIECPYHGWAFSATGKCETIPQQNEGGKAEQSERACVR 129
Query: 299 SLPCFEQEGMIWIWPGDEPPTA---TIPCLLP----PSGFEIHAEIVMELPIEHGLLLDN 351
+ P E +G+++++ G+ P A +P + P P + + +LP + LL+N
Sbjct: 130 NFPTAEHQGLLFVYAGN-PENAKQTKVPLIDPLEESPDKW-VCLNTFRDLPYDALTLLEN 187
Query: 352 LLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY---WDPYPIDMEFRPPCMVLSTI 408
+LD +H P+TH T + S V A+G QG+ W+ P R +
Sbjct: 188 VLDASHIPYTHHRTVGNR-ANASKVDLEVIAAGKQGFEGLWEEGP-----RKGTLGSQQT 241
Query: 409 GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVL--KHVPFMQYLW 466
PG + T + + P + + RL R FAS + + +
Sbjct: 242 HFIAPGLMWHDLTSKQFGRTMTVVYATPIRKGECRLFARFPFQFASKVPATFIKLTPQWY 301
Query: 467 RHFAEQVLNEDLRLVLGQQERMNNGAN-------VWNLPVGYDKLGVRYRLW 511
H + + ED ++ L QER A + LP D + +R W
Sbjct: 302 SHIGQNAILEDDQIFLYHQERYLEAAGGSEKIAKAFYLPTKADLFVLAFRKW 353
>gi|209516871|ref|ZP_03265721.1| Vanillate monooxygenase [Burkholderia sp. H160]
gi|209502687|gb|EEA02693.1| Vanillate monooxygenase [Burkholderia sp. H160]
Length = 376
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 41/238 (17%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + EP V +R DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACMPDEVADKPLGRQICGEPMVFYRNADGAVVALEDFCPHRGAPLSLGFVRDGT 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPCL 325
+ C YHG E GK MP ++ I+S P E+ G +W+WPGD + A + L
Sbjct: 64 LVCGYHGLEMGCQGKATGMPGQRVNGFPSIRSYPVIERYGFVWVWPGDATQADAAKLHHL 123
Query: 326 LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH---------------------- 362
E + + + ++ L++DNL+DL H + H
Sbjct: 124 EWAESSEWAYGGGLYHIRCDYRLMIDNLMDLTHETYVHANSIGQKEIDEAAPKTVAEGDT 183
Query: 363 --TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPG 414
TS F + + P K +GL D P+D F PP VL +G++ G
Sbjct: 184 VRTSRFMENVAAPPFWKMALRGNGLA---DDVPVDRWQICHFTPPSHVLIEVGVAHAG 238
>gi|386061075|ref|YP_005977597.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
M18]
gi|347307381|gb|AEO77495.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
M18]
Length = 351
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 130/333 (39%), Gaps = 44/333 (13%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L + EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRICDEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDGV 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPG--DEPPTATIPCL 325
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG ++ A IP L
Sbjct: 64 LVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPRL 123
Query: 326 -LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA----------------- 367
S + + + ++ L++DNL+DL H + H S+
Sbjct: 124 EWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAAPTTRVDGDE 183
Query: 368 -------KGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKL 416
+ P + +GL D +D F PP VL +G++ G
Sbjct: 184 VITSRHMQNVMAPPFWRMALRGNGLA---DDVAVDRWQICRFTPPSHVLIEVGVAHAGHG 240
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 476
Q + + P S + M+ +F + H + R ++ E
Sbjct: 241 GYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKIFGE 297
Query: 477 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
DL ++ QQ + L + D GV+ R
Sbjct: 298 DLEMLESQQRNLLRHPRRDMLKLNIDAGGVQAR 330
>gi|172064135|ref|YP_001811786.1| vanillate monooxygenase [Burkholderia ambifaria MC40-6]
gi|171996652|gb|ACB67570.1| Vanillate monooxygenase [Burkholderia ambifaria MC40-6]
Length = 359
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 102/242 (42%), Gaps = 47/242 (19%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LKN W+ VA + D D EP V +R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNEPMVFYRAADGQVAALEDFCPHRGAPLSLGFVRD 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
G + C YHG E +GK MP ++ I+S P E+ G IW+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKATGMPGQRVGGFPPIRSFPVVERYGFIWVWPGDA--SEADPAR 119
Query: 326 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 362
LP + H + + ++ L++DNL+DL H + H
Sbjct: 120 LPALSWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAPPKTTA 179
Query: 363 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISK 412
TS F + P + +GL D P+D F PP V+ +G++
Sbjct: 180 NGDEVVTSRFMQNVMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVAH 236
Query: 413 PG 414
G
Sbjct: 237 AG 238
>gi|167033176|ref|YP_001668407.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida GB-1]
gi|166859664|gb|ABY98071.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida GB-1]
Length = 355
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 132/335 (39%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + E V +RG + V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRRICGEKIVFYRGHENRVAAVEDFCPHRGAPLSLGYVEDGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G +W+WPGD+ P L+P
Sbjct: 64 LVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFVWVWPGDQ--AQADPALIP 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------- 368
+ ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 HLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVTG 181
Query: 369 ----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
P + +GL D P+D F PP VL +G++ G
Sbjct: 182 DEVVTARHMENIMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
K Q + P + + M+ +FA+ H + R ++
Sbjct: 239 KGGYHAEAQHKASSIVVDFITPETDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+EDL ++ QQ+ + L + D GV+ R
Sbjct: 296 SEDLEMLERQQQNLLAHPERNLLKLNIDAGGVQSR 330
>gi|407279364|ref|ZP_11107834.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
sp. P14]
Length = 371
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 132/321 (41%), Gaps = 52/321 (16%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQ 291
+P ++R +DG P + + C HR PL +G+ V I+CPYHG ++++ G+C MP+ Q
Sbjct: 43 KPLALYRTEDGRPVALADACWHRLAPLSMGTLVGADGIRCPYHGLQFNSAGRCTHMPAQQ 102
Query: 292 LRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI------VMELPI 343
N + S P E+ +W+WPGD P P +P F++ + +++
Sbjct: 103 TINPSAMVASYPVVERHRFVWVWPGD--PMLADPDTIPDM-FQMDSPDWAGDGRTIDVQA 159
Query: 344 EHGLLLDNLLDLAHAPFTHTSTFAKG------------------------------WSVP 373
+ L+LDNL+DL H F H+S+ + W
Sbjct: 160 NYQLVLDNLMDLTHEEFVHSSSIGQDELSESDFTVTHDDRTVTVTRWMLDIDAPPFWQKN 219
Query: 374 SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHV 433
KF G G D + I +EF+ P + +G++K G + R + ++
Sbjct: 220 MRDKF----PGFSGKVDRWQI-IEFQAPSTIRIDVGVAKAGTGAPEGDRSQGVNGFVMNT 274
Query: 434 CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM--NNG 491
P K + ++ + + R V ED ++ QQ+ + N G
Sbjct: 275 ISPVDEKTALYFWAFMRNYCLDSQLITTQT---RDGVHGVFGEDEAMLTAQQKAIEANPG 331
Query: 492 ANVWNLPVGYDKLGVRYRLWR 512
+NL + + VR + R
Sbjct: 332 HEFYNLNIDAGGMWVRRIIQR 352
>gi|300693204|ref|YP_003749177.1| vanillate o-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum PSI07]
gi|299075241|emb|CBJ34531.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum PSI07]
Length = 342
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ ++ D + E V +RG++G +++ C HR PL LG V +G
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGERMVFYRGQEGKVAALEDFCPHRGAPLSLGFVRDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGKC MP ++ I+ P E+ G IW+WPGD P P L+
Sbjct: 63 HLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGD--PGQADPALI 120
Query: 327 -----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
S + + + ++ L++DNL+DL H + H ++ +
Sbjct: 121 HHLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQ 167
>gi|26990443|ref|NP_745868.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
KT2440]
gi|24985413|gb|AAN69332.1|AE016570_9 vanillate demethylase A [Pseudomonas putida KT2440]
Length = 355
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 131/335 (39%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + E V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKIVFYRARENQVAAVEDFCPHRGAPLSLGYVEDGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+P
Sbjct: 64 LVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALIP 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------- 368
+ + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 HLEWAVSDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVTG 181
Query: 369 ----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
P + +GL D P+D F PP VL +G++ G
Sbjct: 182 DEVVTARHMENIMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
K Q + P S + M+ +FA+ H + R ++
Sbjct: 239 KGGYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+EDL ++ QQ+ + L + D GV+ R
Sbjct: 296 SEDLEMLERQQQNLLAHPERNLLKLNIDAGGVQSR 330
>gi|152985552|ref|YP_001350949.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PA7]
gi|150960710|gb|ABR82735.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PA7]
Length = 351
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 133/335 (39%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L + EP V +RG++G +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELVGKPLGRRICDEPMVFYRGEEGRVVALEDFCPHRGAPLSLGFVEDGV 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGD--EPPTATIPCL 325
+ C YHG DG+ MP ++R I+ P E+ G +W+WPGD IP L
Sbjct: 64 LVCGYHGLAMGEDGRTRSMPGQRVRGFPCIRHFPVVERHGFVWVWPGDAGHADATLIPRL 123
Query: 326 -LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
S + + + ++ L++DNL+DL H + H S+ + + P++
Sbjct: 124 EWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPSTR 178
Query: 385 LQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKPG 414
++G +W D P+D F PP VL +G++ G
Sbjct: 179 VEGDEVITSRHMENVMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
+ Q + P S + M+ +F + H + R ++
Sbjct: 239 HGGYRAPAQRKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTASIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
EDL ++ QQ + L + D GV+ R
Sbjct: 296 GEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|161519763|ref|YP_001583190.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189354058|ref|YP_001949685.1| vanillate o-demethylase oxygenase subunit [Burkholderia multivorans
ATCC 17616]
gi|160343813|gb|ABX16898.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans ATCC
17616]
gi|189338080|dbj|BAG47149.1| putative vanillate o-demethylase oxygenase subunit [Burkholderia
multivorans ATCC 17616]
Length = 347
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ + + E V FR +G +++ C HR PL LG+V +G
Sbjct: 3 LKNAWYVACTPDEFASKPLGRQICGERMVFFRDGEGTVAALEDFCPHRGAPLSLGTVRDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATI-P 323
+ C YHG DGKC MP ++R + I+ P E+ G +W+WPGD + +ATI P
Sbjct: 63 HLVCGYHGLTMGADGKCTSMPCQRVRGIPAIRRYPAVERYGFVWVWPGDPAQADSATIHP 122
Query: 324 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
+ + + ++ L++DNL+DL H + H S+ +
Sbjct: 123 LHWADDPGWAYGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|424944304|ref|ZP_18360067.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
NCMG1179]
gi|346060750|dbj|GAA20633.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
NCMG1179]
Length = 402
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 133/335 (39%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L + EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 55 KNAWYVACTPDELAGKPLGRRICDEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDGV 114
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPG--DEPPTATIPCL 325
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG ++ A IP L
Sbjct: 115 LVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPRL 174
Query: 326 -LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 175 EWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTTR 229
Query: 385 LQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKPG 414
++G +W D +D F PP VL +G++ G
Sbjct: 230 VEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHAG 289
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
Q + + P S + M+ +F + H + R ++
Sbjct: 290 HGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKIF 346
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
EDL ++ QQ + L + D GV+ R
Sbjct: 347 GEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 381
>gi|374989216|ref|YP_004964711.1| oxidoreductase subunit alpha [Streptomyces bingchenggensis BCW-1]
gi|297159868|gb|ADI09580.1| oxidoreductase subunit alpha [Streptomyces bingchenggensis BCW-1]
Length = 354
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 125/279 (44%), Gaps = 45/279 (16%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGK-DGIPGCVQNTCAHRACPLHLGSVNEG 267
+N W+ A+ ++ + + EP +R + DG + + C HR PL ++
Sbjct: 6 RNQWYVAAYGREIGRELLGRTILGEPIAFYRSESDGAVVALHDRCVHRRYPLSASRLDGD 65
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD---EPPTAT- 321
R+ C YHG+ Y T G C +P + R ++ S P EQ+ ++W+W GD PTA
Sbjct: 66 RVVCGYHGFTYDTTGTCVFVPGQKRIPRTARVASYPVVEQDSLVWVWIGDPKSAAPTAIP 125
Query: 322 -IPCLLPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAPFTH--------------TS 364
P L P + ME PI+ +GLL+DNL+DL+H + H T+
Sbjct: 126 RAPWLADPRWTTVGG---ME-PIDAGYGLLVDNLMDLSHETYLHGGYIGTPEVAETPITT 181
Query: 365 TFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 415
T +G V + + F ++G++G + D+E+ PC+ L I+ G
Sbjct: 182 TVDEGAGVVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSRIAPVGV 240
Query: 416 LEGQNTRQ-CATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
L G + A H+ + PS+ + +S DFA
Sbjct: 241 LPGPDGDDPDAFHVEITYAITPSTEHSVYDFWAVSRDFA 279
>gi|224092649|ref|XP_002309693.1| predicted protein [Populus trichocarpa]
gi|222855669|gb|EEE93216.1| predicted protein [Populus trichocarpa]
Length = 556
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 129/296 (43%), Gaps = 39/296 (13%)
Query: 218 WFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P+ + D+ DD + V+++ G C ++ C HR L G + +GR++
Sbjct: 106 WYPLYLTKDVPDDAPLGLTVFDKQVVLYKDGQGELRCFEDRCPHRLAKLSEGQLIDGRLE 165
Query: 271 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF------EQEGMIWIW--PGDEPPTATI 322
C YHGW++ +G C K+P N KI C E +G++W+W +P +
Sbjct: 166 CLYHGWQFEGEGNCVKIPQLPA-NAKIPQSACVKTYEVRESQGVVWVWMSSKSQPNINKL 224
Query: 323 PCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVKF 378
P GF+ + V ELP +H +LL+NL+D AH P +H T AK + L
Sbjct: 225 PWFENFARPGFK-DSSAVHELPYDHSILLENLMDPAHIPISHDRTDLSAKRENAQPLRFE 283
Query: 379 LTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 431
+T + G G+W P + F PC VLS E + + + L
Sbjct: 284 VTERTDRGFAGWWGGGDAQTLPNFLRFEAPC-VLSN-------NREFIDEKGVKQYFSGL 335
Query: 432 HVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 486
+C P+ + K+ L+ R + +P ++ + V +D+ + Q E
Sbjct: 336 FLCRPTGQGKSMLIVRFGGTAMPQIANWIP--EWFFHQRGCTVFEQDMGFLSSQNE 389
>gi|358455131|ref|ZP_09165359.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357081384|gb|EHI90815.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 367
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+++W+PVAF++DL + V++R +G P C + C HR L G +G
Sbjct: 16 LRHYWYPVAFASDLGGAPLARRLLGTDVVLWRDAEGRPACAADRCPHRDAKLSRGWTEDG 75
Query: 268 RIQCPYHGWEYSTDGKC----EKMPSTQLR-NVKIKSLPCFEQEGMIWIW--PGDEPPTA 320
+ CPYHGW Y +DGKC + P ++ + + P E G++W+ P EP TA
Sbjct: 76 AVVCPYHGWRYGSDGKCVLIPQNAPGQRISPRAVVATYPVTEALGLLWVCLDPASEPATA 135
Query: 321 -----TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
IP P G+ + E P LLDN LD AH F H TF
Sbjct: 136 MAGIPAIPQFGQP-GWRVVQEFDTVWPCSAPHLLDNNLDPAHIAFVHRRTFGN 187
>gi|107104003|ref|ZP_01367921.1| hypothetical protein PaerPA_01005076 [Pseudomonas aeruginosa PACS2]
Length = 351
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 130/333 (39%), Gaps = 44/333 (13%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L + EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRICDEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDGV 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPG--DEPPTATIPCL 325
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG ++ A IP L
Sbjct: 64 LVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPRL 123
Query: 326 -LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA----------------- 367
S + + + ++ L++DNL+DL H + H S+
Sbjct: 124 EWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAAPTTRVDGDE 183
Query: 368 -------KGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKL 416
+ P + +GL D +D F PP VL +G++ G
Sbjct: 184 VITSRHMQNVMAPPFWRMALRGNGLA---DDVAVDRWQICRFTPPSHVLIEVGVAHAGHG 240
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 476
Q + + P S + M+ +F + H + R ++ E
Sbjct: 241 GYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKIFGE 297
Query: 477 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
DL ++ QQ + L + D GV+ R
Sbjct: 298 DLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|398838093|ref|ZP_10595376.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM102]
gi|398905470|ref|ZP_10652864.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM50]
gi|398117134|gb|EJM06888.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM102]
gi|398174440|gb|EJM62235.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM50]
Length = 348
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 134/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEKMVFYRGHEGKVTAVEDFCPHRGAPLSLGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+P P L+
Sbjct: 64 LVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQP--LADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ + G +W D P+D F PP VL +G++
Sbjct: 177 TTVDGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK +Q + P + + M+ +F + R +
Sbjct: 237 AGKGGYHAPQQFKASSIVVDFITPQTETSIWYFWGMARNFNP---QDEALTASIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ +EDL ++ QQ+ + + L + D GV+ R
Sbjct: 294 IFSEDLEMLERQQQNLISHPQRNLLKLNIDAGGVQSR 330
>gi|81300845|ref|YP_401053.1| hypothetical protein Synpcc7942_2036 [Synechococcus elongatus PCC
7942]
gi|81169726|gb|ABB58066.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 334
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L N W+ +A STDL + + V++R G + + C HR L G V
Sbjct: 9 LPNHWYAIAASTDLGSTPIAASLLDQQLVVYRTTAGQVVVLDDRCPHRGASLACGQVKGN 68
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
I CPYHGW++ DG C ++PS Q + K+ S P E+ G+IW++ GD A
Sbjct: 69 AIACPYHGWQFDLDGHCAQIPSQQASARIPQAAKVASYPVQERYGLIWVFTGDRDRAAQT 128
Query: 323 PCLLPPSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P P + +V + ++ + +N +D+AH+PF H ++F
Sbjct: 129 PLWELPEYDQAGWRVVQGQFDWAADYRRVTENGMDVAHSPFVHANSFG 176
>gi|383452944|ref|YP_005366933.1| Rieske family iron-sulfur cluster-binding protein [Corallococcus
coralloides DSM 2259]
gi|380734627|gb|AFE10629.1| Rieske family iron-sulfur cluster-binding protein [Corallococcus
coralloides DSM 2259]
Length = 363
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 213 RLKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL + WF + S +L D + P V+FRG+ G PG + + C HR PL LG V
Sbjct: 21 RLPHSWFILCTSRELGDRPLARTLQGTPLVLFRGEGGKPGALMDRCPHRNVPLSLGRVTN 80
Query: 267 GRIQCPYHGWEYSTDGKCEKMPST----QLRNVKIKSLPCFEQEGMIWIW--PGDEPPTA 320
G+++C YHGW + T G+C +P + R+ S EQ+G +W++ PG EP +
Sbjct: 81 GQLECGYHGWRFDTGGQCRLIPGLVGEPEARSRCAASYATREQDGFVWVYSTPGVEPTSE 140
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
L + V+ P +L+N LD+ H F H F
Sbjct: 141 PFRFPLLDAADYTTVRRVLRAPGSLHAVLENTLDVPHTAFLHGGLF 186
>gi|378716912|ref|YP_005281801.1| putative vanillate O-demethylase oxygenase subunit A [Gordonia
polyisoprenivorans VH2]
gi|375751615|gb|AFA72435.1| putative vanillate O-demethylase oxygenase subunit A [Gordonia
polyisoprenivorans VH2]
Length = 375
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 137/318 (43%), Gaps = 59/318 (18%)
Query: 216 NFWFPVAF-----STDLKDDTM--EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 267
N W+ A+ ST + T+ +P ++R G P + + C HR PL +G +
Sbjct: 19 NAWYAAAWDHEVGSTQILSRTIAGKPLALYRTDSGRPVALADACWHRLAPLSMGKRIGAE 78
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
IQCPYHG +Y+ G+C +MP+ + N + S P E+ +W+WPGD PT P
Sbjct: 79 EIQCPYHGLQYNAAGRCTRMPAQKTINPSAMVASYPIEERHRYLWVWPGD--PTLADPST 136
Query: 326 LPPSGFEIHA------EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 379
+ P F++ + + +++ + L++DNL+DL H F H+S+ G S +F+
Sbjct: 137 I-PDMFQMDSPEWAGDGLTIDVRANYQLVVDNLMDLTHEEFVHSSSI--GQDELSESEFI 193
Query: 380 T------------------PASGLQGYWDPYP-----ID----MEFRPPCMVLSTIGISK 412
T P L+ D +P +D +EF+ P + +G++K
Sbjct: 194 TTHDENTVTVTRWMHNIDAPPFWLKNMRDKFPGFTGKVDRWQIIEFQAPGTIRIDVGVAK 253
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL----WRH 468
G + R + ++ P R ++ F + +++ L R
Sbjct: 254 AGTGAPEGDRSQGVNGFVMNTISPVDE-------RTAIYFWAFMRNYRLDSQLITTQLRD 306
Query: 469 FAEQVLNEDLRLVLGQQE 486
V ED ++ QQE
Sbjct: 307 GVHGVFGEDEEMLTAQQE 324
>gi|404400064|ref|ZP_10991648.1| oxidoreductase subunit alpha [Pseudomonas fuscovaginae UPB0736]
Length = 353
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 133/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + E V +RG++G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAQKPLGRQICGEKMVFYRGQEGAVMAVEDFCPHRGAPLSLGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+P
Sbjct: 64 LVCGYHGLVMGGDGKTVAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--ALADPALIP 121
Query: 328 PSGFEI-----HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + + + E+ ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDQWAYGGGLFEIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGDEVVTARYMENIMAPPFWRMALRGNHLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK + + P + + M+ F H + R +
Sbjct: 237 AGKGGYHAAPEHKAASIVVDFITPQTETSIWYFWGMARSFNP---HDQALTESIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 294 IFSEDLEMLERQQQNLLAHPTRNLLKLNIDAGGVQSR 330
>gi|432336210|ref|ZP_19587735.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
wratislaviensis IFP 2016]
gi|430776837|gb|ELB92235.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
wratislaviensis IFP 2016]
Length = 373
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 141/336 (41%), Gaps = 51/336 (15%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 267
N W+ A+ ++ + +P ++R DG P + + C HR PL LG+ +
Sbjct: 19 NAWYVAAWDYEVTSAKLLARRIADKPMTLYRTTDGRPVALADACWHRLAPLSLGTRIGAD 78
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QCPYHG +++ G+C KMP+ + N + S P ++ +W+WPGD PT P
Sbjct: 79 EVQCPYHGLRFNSAGRCTKMPAQETINPSAMVASYPVEQRHRFLWVWPGD--PTLADPTT 136
Query: 326 LPPSGFEIHA------EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------GWSVP 373
+ P F++ + +++ + L+LDNL+DL H F H+S+ + + V
Sbjct: 137 I-PDMFQMDSPEWAGDGRTIDVQANYQLVLDNLMDLTHEEFVHSSSIGQEELSESDFVVT 195
Query: 374 SLVKFLTPAS--------------------GLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
+ +T + G +G D + I +EF+ P + +G++K
Sbjct: 196 HDERTVTVSRWMHNIDAPPFWLKNMRDKFPGFEGKVDRWQI-IEFQAPGTIRIDVGVAKA 254
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
G + R + ++ P K LY + L+ L R V
Sbjct: 255 GTGAPEGDRSQGVNGFVMNTITPVDEKTA--LYFWAFQRNYRLESQLITTQL-RDGVHGV 311
Query: 474 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVR 507
ED ++ QQ + N +NL + + VR
Sbjct: 312 FGEDEAMLTAQQAAIEANPDHEFYNLNIDAGGMWVR 347
>gi|78061272|ref|YP_371180.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
gi|77969157|gb|ABB10536.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
Length = 373
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 211 NTRLKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
N LKN W+ VA + D D E V +R DG +++ C HR PL LG
Sbjct: 14 NVFLKNAWY-VAGTPDEIDGKPLGRKICNESMVFYRAADGQVAALEDFCPHRGAPLSLGF 72
Query: 264 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATI 322
V +G + C YHG E +GK MP ++ I+S P E+ G IW+WPGD +A
Sbjct: 73 VRDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPAVERYGFIWVWPGDA--SAAD 130
Query: 323 PCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P LP + H + + ++ L++DNL+DL H + H ++ +
Sbjct: 131 PAKLPVLAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQ 181
>gi|121608344|ref|YP_996151.1| vanillate monooxygenase [Verminephrobacter eiseniae EF01-2]
gi|121552984|gb|ABM57133.1| Vanillate monooxygenase [Verminephrobacter eiseniae EF01-2]
Length = 352
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 140/319 (43%), Gaps = 37/319 (11%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 295
V++R ++G + + C HR PL LG++ + ++C YHG + ++G+C MPS + N
Sbjct: 36 VLYRKQNGAAVALADACWHRLLPLSLGTIVDDDVRCGYHGLRFDSEGRCTHMPSQETINP 95
Query: 296 K--IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-----VMELPIEHGLL 348
+++ P E+ +WIWPGD P P L+P + + E+ ++ L+
Sbjct: 96 SACVRAFPIVERHRFVWIWPGD--PALADPTLVPDLRWMNDPAWTGDGRMTEVKADYRLV 153
Query: 349 LDNLLDLAHAPFTHTSTFAK------------GWSVPSLVKFLT-----PASGLQGYWDP 391
+DNL+DL H + H S+ G + ++ +++ P G Q P
Sbjct: 154 IDNLMDLTHETYVHGSSIGNEALAKAPFDAVHGETTATIRRWVLNEDAPPFWGAQ-LGKP 212
Query: 392 YPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYR 447
P+D + F+ P ++ +G++ G + R+ + +H+ PS+ K Y
Sbjct: 213 GPVDRWQIIHFKAPSTIVLDVGVAPAGSGAPEGHREAGVGMWVIHIPTPSTAKSC---YY 269
Query: 448 MSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLG 505
+ H + A +L ED ++ QQ + N + +N+ + L
Sbjct: 270 FWCHLRNYRVHEQRVTREILQGAGGILLEDEIVIEAQQRAIDKNPDRDFYNMNIDAGSLW 329
Query: 506 VRYRLWRDALEKGAKQLPF 524
R RL +EK ++ P
Sbjct: 330 AR-RLIDAMIEKETRRRPI 347
>gi|312199684|ref|YP_004019745.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Frankia sp.
EuI1c]
gi|311231020|gb|ADP83875.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. EuI1c]
Length = 373
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 83/169 (49%), Gaps = 19/169 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L++ W PVA ST+L D+ + EPWV+ R +G+ ++ C HR PL G V+
Sbjct: 14 LRHGWHPVALSTELGDEPLAVRLLGEPWVLAR-LNGVLTAFEDRCPHRLAPLSAGRVDGE 72
Query: 268 RIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
+ CPYHGW Y+ DG C +P+ R + E+ G++WI P DEP
Sbjct: 73 TLVCPYHGWRYAADGGCTLVPALGPGVPAPRRARATTAWGVTERHGLVWIAP-DEPFAEI 131
Query: 322 IPCLLPPSGFEIHAEIVME---LPIEHGLLLDNLLDLAHAPFTHTSTFA 367
+ LP +G + +E GLL DN LD AH PF H +T
Sbjct: 132 L--ALPEAGEDGFDSTWLEPARSTAAAGLLADNFLDTAHFPFVHAATIG 178
>gi|427702133|ref|YP_007045355.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427345301|gb|AFY28014.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 435
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 136/300 (45%), Gaps = 35/300 (11%)
Query: 215 KNFWFPVAFSTDLK----------DDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
+ WFPVA+ DL D+ + W G+ + + C HR PL G +
Sbjct: 7 RQHWFPVAYLRDLDPARPTAFTLLDEDLVLWWDRAGQ--LWRAFADVCPHRLVPLSQGRI 64
Query: 265 NEG-RIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEP 317
N G ++CPYHGW ++ DG C +P S + ++ E +G+++++ G+E
Sbjct: 65 NAGGELECPYHGWSFAGDGHCTAIPQAEPGASPSAVRSRCRAYATAEAQGLLFVFAGEEA 124
Query: 318 PTATIPCLLPP----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 373
A +P L P G+ + + +LP++ LL+N+LD++H PFTH T K +
Sbjct: 125 DAAAVPLPLVPVLEEPGWFVQ-DTFRDLPMDALTLLENVLDVSHVPFTHHRTVGKRENAA 183
Query: 374 SLVKFLTPASGLQGY---WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 430
+V +T +SG +G+ W+ P R + + + PG + T +
Sbjct: 184 PVVATIT-SSGPEGFTALWEEGP-----RRGKLGSQSTTYAAPGLMWHDLTAPSFARILT 237
Query: 431 LHVCLPSSRKKTRLLYRMSLDFAS-VLKHVPFMQYLW-RHFAEQVLNEDLRLVLGQQERM 488
+ P R + RL R F S + + ++ W +H A + ED ++ L QER+
Sbjct: 238 VVYATPIRRGECRLFARFPFQFESRLPPLLLGLRPRWLQHIANHTVLEDDQVFLHWQERV 297
>gi|56752067|ref|YP_172768.1| hypothetical protein syc2058_d [Synechococcus elongatus PCC 6301]
gi|56687026|dbj|BAD80248.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 340
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L N W+ +A STDL + + V++R G + + C HR L G V
Sbjct: 15 LPNHWYAIAASTDLGSTPIAASLLDQQLVVYRTTAGQVVVLDDRCPHRGASLACGQVKGN 74
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
I CPYHGW++ DG C ++PS Q + K+ S P E+ G+IW++ GD A
Sbjct: 75 AIACPYHGWQFDLDGHCAQIPSQQASARIPQAAKVASYPVQERYGLIWVFTGDRDRAAQT 134
Query: 323 PCLLPPSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P P + +V + ++ + +N +D+AH+PF H ++F
Sbjct: 135 PLWELPEYDQAGWRVVQGQFDWAADYRRVTENGMDVAHSPFVHANSFG 182
>gi|255079488|ref|XP_002503324.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
gi|226518590|gb|ACO64582.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
Length = 903
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 147/360 (40%), Gaps = 51/360 (14%)
Query: 195 KLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPG 246
+P K+ + + + N W+PVAF L D EP V++R G+
Sbjct: 377 NVPEKTEKNTEKIDDETPEILNQWWPVAFEHQLDADGDKLAVSLFGEPLVLYRTDGGVVN 436
Query: 247 CVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCF 303
CVQ+ CAH++CPL LG V +G++ C YHGW Y G+ +P+ Q + PC
Sbjct: 437 CVQDRCAHKSCPLSLGYVRDGKLLCRYHGWAYGEGGELVDVPALQAGRCPKASVPKYPCH 496
Query: 304 EQEGMIWIWPGDEP-------PTATIPCLLPPSGFE-IHAEIVMELPIEHGL----LLDN 351
+G++ +W G+ P ++ G E + + E G+ ++
Sbjct: 497 VADGVVHVWLGEAAECGRSQLPGHSLVATRSMKGVETLSWPRLTETREWDGVPWHSAVEI 556
Query: 352 LLDLAHAPFTHTSTFAKGWS--VPSLVKFLTPASGLQGYWDPY-------PIDMEFRPPC 402
D H F H +T A V L +F T G+ Y + F PP
Sbjct: 557 TQDFTHLQFVHPNTQAGRAPLLVGGLTEFETEGHPPGGFVAEYVGGSGKGGGRVTFVPPS 616
Query: 403 MVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM 462
V++ +G+ A L + +P++ KT +L V H
Sbjct: 617 TVMNESFFVDEEAPDGKK----AFPLCFVFRFVPTAPGKTAVL---------VQTHQKLF 663
Query: 463 QYLWRHFAEQVLN------EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 516
++ FA+ ++N +D ++ Q+ R+ G+ WNLP+ DK + + WR A E
Sbjct: 664 PHISDRFAKALMNMTKVMSQDQLVLAAQRLRVAQGSPQWNLPIESDKHLLHFTKWRVAAE 723
>gi|218440057|ref|YP_002378386.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
gi|218172785|gb|ACK71518.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
Length = 442
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 130/303 (42%), Gaps = 44/303 (14%)
Query: 250 NTCAHRACPLHLGSVN--EGRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKS 299
+ C HR PL G ++ G + C YHGWE+ T G C+++P + ++ ++
Sbjct: 51 DQCPHRLAPLSEGRIDPKTGYLMCSYHGWEFDTQGTCQRIPQAEKPEIVQEKVQQWCVRV 110
Query: 300 LPCFEQEGMIWIWPGDEPP--TATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNL 352
P ++ ++W+WP + A+ P L P GF + + +V +L + L++N+
Sbjct: 111 FPTRQENDLLWVWPDENSAELAASTPLPLSPLLDAKKGF-VWSSMVRDLDYDWQTLVENV 169
Query: 353 LDLAHAPFTHTSTFA---KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 409
D +H PF+H K VP + P + F PPC + I
Sbjct: 170 ADPSHVPFSHHGIQGDREKARPVPIKIIESLPHRIQATVEIRKGTTITFEPPCHLEYNIS 229
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 469
+ GK G T C+P K+R++ + +FA H+ W H
Sbjct: 230 VGDQGKQVGLVT-----------YCIPVMPGKSRIVAQFPRNFAKTFHHL--TPRWWNHI 276
Query: 470 AEQ--VLNEDLRLV------LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQ 521
E+ VL+ D+ L+ L Q+E+ + + +P D+L +R W D +G Q
Sbjct: 277 MERNAVLDGDMILLQQQEYFLRQREQQESWKTAYKMPTSADRLVTEFRNWFDKYCQG--Q 334
Query: 522 LPF 524
LP+
Sbjct: 335 LPW 337
>gi|302039438|ref|YP_003799760.1| rieske iron-sulphur protein [Candidatus Nitrospira defluvii]
gi|300607502|emb|CBK43835.1| Rieske iron-sulphur protein [Candidatus Nitrospira defluvii]
Length = 362
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 21/172 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTME-------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L FW+P + ST L M+ P ++ R K G +++ C HR PL G +
Sbjct: 17 LFGFWYPASTSTALAVGQMQTQVMLGQPILVCRNKQGQVAAMRDICPHRGMPLSFGQFDG 76
Query: 267 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDEPPT 319
R++C YHGW++ T G+C +P+ Q + I S PC +Q+G IW++ P + P
Sbjct: 77 ERVECAYHGWQFDTCGRCRHIPALVEGSPLQPEKIGITSYPCQDQDGYIWVFLPDPQQPK 136
Query: 320 ATIPCL----LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
+P L LP + I +++ I+ G++ L+D AH PF H S++
Sbjct: 137 LPVPELPRLPLPSKPYRMIQISTILDCTIDDGIV--GLMDPAHGPFVHQSSW 186
>gi|254254788|ref|ZP_04948105.1| Phenylpropionate dioxygenase [Burkholderia dolosa AUO158]
gi|124899433|gb|EAY71276.1| Phenylpropionate dioxygenase [Burkholderia dolosa AUO158]
Length = 347
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ + D + E V FR +G +++ C HR PL LG+V +G
Sbjct: 3 LKNTWYVACTPDEFADKPLGRQICGERMVFFRDANGTVAALEDFCPHRGAPLSLGTVRDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD----EPPTATI 322
R+ C YHG DGKC MP ++ + I+ P E+ G +W+WPGD +P T
Sbjct: 63 RLVCGYHGLTMGADGKCVSMPCQRVGGIPAIRRYPAVERYGFVWVWPGDPAQADPATIHR 122
Query: 323 PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
G+ + + + ++ L++DNL+DL H + H S+ +
Sbjct: 123 LHWADDPGWA-YGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|17548443|ref|NP_521783.1| vanillate O-demethylase oxygenase [Ralstonia solanacearum GMI1000]
gi|17430690|emb|CAD17373.1| probable vanillate o-demethylase oxygenase subunit oxidoreductase
protein [Ralstonia solanacearum GMI1000]
Length = 342
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 39/239 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ ++ D + E V +RG++G +++ C HR PL LG V +G
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGERMVFYRGQEGKVAALEDFCPHRGAPLSLGFVRDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGKC MP ++ I+ P E+ G IW+WPGD P P +
Sbjct: 63 HLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGD--PEQADPARI 120
Query: 327 -----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 368
S + + + ++ L++DNL+DL H + H ++ +
Sbjct: 121 HHLEWAESEAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTKVE 180
Query: 369 GWSVPS--LVKFLTP----ASGLQ--GYWDPYPID----MEFRPPCMVLSTIGISKPGK 415
G +V + ++ + P A+ L+ G D P D F PP VL +G++ GK
Sbjct: 181 GDAVVTSRFMENIMPPPFWATALRGAGLADDVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|419962044|ref|ZP_14478041.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
opacus M213]
gi|414572580|gb|EKT83276.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
opacus M213]
Length = 373
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 17/168 (10%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 267
N W+ A+ ++ + +P ++R DG P + + C HR PL LG+ +
Sbjct: 19 NAWYVAAWDYEVTSAKLLARRIADKPMTLYRTTDGRPVALADACWHRLAPLSLGTRIGAD 78
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPT----AT 321
+QCPYHG +++ G+C KMP+ + N + S P ++ +W+WPGD PT AT
Sbjct: 79 EVQCPYHGLRFNSAGRCTKMPAQETINPSAMVASYPVEQRHRFLWVWPGD--PTLADPAT 136
Query: 322 IPCLLPPSGFEIHAE-IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
IP + E + +++ + L+LDNL+DL H F H+S+ +
Sbjct: 137 IPDMFQMDSPEWAGDGRTIDVQANYQLVLDNLMDLTHEEFVHSSSIGQ 184
>gi|224143358|ref|XP_002324928.1| predicted protein [Populus trichocarpa]
gi|222866362|gb|EEF03493.1| predicted protein [Populus trichocarpa]
Length = 549
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 145/333 (43%), Gaps = 45/333 (13%)
Query: 218 WFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P+ + D+ DD + V+++ G C ++ C HR L G + +GR++
Sbjct: 99 WYPLYLTKDVPDDAPLGLNVFDKQLVLYKDGQGELRCHEDRCPHRLAKLSEGQLIDGRLE 158
Query: 271 CPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCF------EQEGMIWIWPG-DEPPT-AT 321
C YHGW++ +GKC K+P QL N KI C E +G++W+W PP
Sbjct: 159 CLYHGWQFEGEGKCVKIP--QLPANAKIPQSACVKTYEVKESQGVVWVWMSLKTPPNFKK 216
Query: 322 IPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVK 377
+P GF+ + ELP +H +LL+NL+D AH P +H T +K +L
Sbjct: 217 VPWFENFARPGFQ-DTSTIHELPYDHSILLENLMDPAHIPISHDRTDWTSKREDAQALRF 275
Query: 378 FLTPAS--GLQGYWDPYPID-----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 430
+T + G G W + F+ PC++ + I E + + +
Sbjct: 276 EVTERTHRGFAGRWGKEKDQKLRSFLRFQAPCVLSNDI--------EFADEKGVTQYFTG 327
Query: 431 LHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE-RM 488
L +C P+ + K+ ++ R + + K +P ++ + A ++ +D+ + Q E M
Sbjct: 328 LFLCRPTGQGKSMIIVRFGATKRPQMAKVIP--KWYFHQNACKIFEQDMGFLSSQNEVLM 385
Query: 489 NNGANVWNLPVGY---DKLGVRYRLWRDALEKG 518
L + D YR W D + G
Sbjct: 386 KEKVPTKELYINLKSSDTWVAEYRKWMDKVGHG 418
>gi|386288171|ref|ZP_10065332.1| vanillate monooxygenase [gamma proteobacterium BDW918]
gi|385278866|gb|EIF42817.1| vanillate monooxygenase [gamma proteobacterium BDW918]
Length = 351
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ +S DL E V+FR +G + C HR PL G V
Sbjct: 4 LRNCWYCAGWSADLGGQPTGIKILNEEIVLFRDSEGRATALSGICPHRFAPLSKGKVVGD 63
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
RIQCPYHG E++ +G+C P + K++S P E+ G +WIW GD P A
Sbjct: 64 RIQCPYHGLEFNQEGRCMLNPHGRGLIPERAKLQSYPLAERHGALWIWMGD--PGAADES 121
Query: 325 LLPPSGFEIHAEI------VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
+P F E + + + L++DNLLDL HA + H ST A
Sbjct: 122 KIPEFDFVSDRESWAGATGYLRMDASYELVIDNLLDLTHADYIHGSTLA 170
>gi|148554478|ref|YP_001262060.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499668|gb|ABQ67922.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 347
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 85/174 (48%), Gaps = 21/174 (12%)
Query: 212 TRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
T + N W+ +S DL D + +P V+FR DG+ + + C HR PLHLG V
Sbjct: 2 TFIVNQWYGAIWSQDLGDAPVARRLLGKPIVLFRTDDGV-AALADVCPHRFVPLHLGKVV 60
Query: 266 EGR-IQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
+GR I+C YHG E+ G C + P R K++S E+ GM+WIW G+
Sbjct: 61 DGRAIRCGYHGLEFDRTGACVRNPHNAGRIPPAAKVESHQVAERHGMVWIWMGERDAD-- 118
Query: 322 IPCLLPPSGF-------EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P L+P F I A +E+ + ++++NLLDL+HA H
Sbjct: 119 -PSLIPDYSFLDSADPQHISARDHLEIRSNYRIVVENLLDLSHASILHDGILGN 171
>gi|352094528|ref|ZP_08955699.1| Pheophorbide a oxygenase [Synechococcus sp. WH 8016]
gi|351680868|gb|EHA64000.1| Pheophorbide a oxygenase [Synechococcus sp. WH 8016]
Length = 440
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 130/313 (41%), Gaps = 61/313 (19%)
Query: 218 WFPVAFSTDLKDDTMEPWVIFRGKDGI-----PG----CVQNTCAHRACPLHLGSVNE-G 267
W+PVA+ DL D T +D + PG ++ C HR PL G +N G
Sbjct: 9 WWPVAYVRDL-DPTRPQRFTLLEQDLVLWWDAPGESWRAFKDVCPHRLVPLSEGRINSAG 67
Query: 268 RIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPG-----DE 316
+++CPYHGW + G C +P ++ R SLP +G++++W G D
Sbjct: 68 QLECPYHGWSFDGQGSCRAIPQLGARARSESRRTACGSLPTAIGQGLLFVWSGTPSAADS 127
Query: 317 PPTATIPCLLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 372
+P L + IV +LP++ LL+N+LD++H PFTH T K +
Sbjct: 128 AALPLVPVLQEQGDGWANGWIVQDTFRDLPMDALTLLENVLDVSHVPFTHHRTVGKRENA 187
Query: 373 PSLVKFLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL-- 428
+ +T + G + +W P + GKL QNT A L
Sbjct: 188 SPVEAVITREDSQGFEAFWQEGP------------------RKGKLGSQNTHFRAPQLMW 229
Query: 429 HQLHV-----------CLPSSRKKTRLLYRMSLDFASVLKHVPF-MQYLW-RHFAEQVLN 475
H L +P SR K RL R F S L V ++ W +H +
Sbjct: 230 HDLTAKGFARILTVVYAVPISRGKCRLFARFPFQFKSALPRVLVGLRPRWLQHIGNHKVL 289
Query: 476 EDLRLVLGQQERM 488
ED ++ L QER+
Sbjct: 290 EDDQVFLHWQERV 302
>gi|387903877|ref|YP_006334215.1| vanillate O-demethylase oxygenase subunit oxidoreductase protein
[Burkholderia sp. KJ006]
gi|387578769|gb|AFJ87484.1| Putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Burkholderia sp. KJ006]
Length = 372
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 104/252 (41%), Gaps = 47/252 (18%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRA 256
+ P + N LKN W+ VA + D D E V +R DG +++ C HR
Sbjct: 6 TAPKETTNVFLKNAWY-VACTPDEIDGKPLGRKICNESMVFYRAADGRVAALEDFCPHRG 64
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD 315
PL LG V +G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD
Sbjct: 65 APLSLGFVRDGVLVCGYHGLEMGCNGKTAAMPGQRVGGFPAIRSFPVVERYGFVWVWPGD 124
Query: 316 EPPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH-------- 362
+ P LP + H + + ++ L++DNL+DL H + H
Sbjct: 125 A--SRADPAALPALTWADDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKE 182
Query: 363 ----------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPC 402
TS F P + +GL D P+D F PP
Sbjct: 183 IDEAPPKTTSHGDEVVTSRFMHNVMPPPFWQMALRGNGLA---DDVPVDRWQICRFTPPS 239
Query: 403 MVLSTIGISKPG 414
V+ +G++ G
Sbjct: 240 HVMIEVGVAHAG 251
>gi|398805739|ref|ZP_10564702.1| ring-hydroxylating dioxygenase, large terminal subunit [Polaromonas
sp. CF318]
gi|398090554|gb|EJL81023.1| ring-hydroxylating dioxygenase, large terminal subunit [Polaromonas
sp. CF318]
Length = 364
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 41/237 (17%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++ + + V+FR DG +++ C HR PL +GS++ +
Sbjct: 11 NAWYAAAYDVEVGRKLLARTICKQKLVMFRRTDGQVAALEDACWHRLLPLSMGSLDGDEV 70
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG Y+ G+C MPS + N +++ P E+ +WIWPGD P P L+P
Sbjct: 71 TCGYHGLVYNAQGRCTHMPSQETLNPSACVRAFPVLEKHRFVWIWPGD--PAKADPALVP 128
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------GW 370
+ + ++ + ++ L++DNL+DL H F H S+ + G
Sbjct: 129 DMHWNDDPDWAGDGKLITVKCDYRLVVDNLMDLTHETFVHGSSIGQRAVAEAPFVATHGD 188
Query: 371 SVPSLVKFLTP-------------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 414
++ +++ A G +G D + I ++F PC V +G+++ G
Sbjct: 189 RTATVTRWMENIDAPPFWAGQIEHARGYKGKVDRWQI-IKFEAPCTVNIDVGVAEAG 244
>gi|308811733|ref|XP_003083174.1| slr1747 (ISS) [Ostreococcus tauri]
gi|116055053|emb|CAL57449.1| slr1747 (ISS), partial [Ostreococcus tauri]
Length = 405
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 53/300 (17%)
Query: 267 GRIQCPYHGWEYSTDGKCEKMP--------STQLRNVK--IKSLPCFEQEGMIWIWPG-- 314
G ++C YHGW ++ +GKC +P T L++ + + + PC E++GM+W++P
Sbjct: 5 GELECGYHGWTFTGEGKCTSIPQIEPGAGLETALKSPRACVAAYPCVEKQGMLWVYPTAK 64
Query: 315 DEPPTATIPCL-LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 370
D+ P AT+P L L P + ++ ++ +LP++ LL+N++D++H PFTH ++ K
Sbjct: 65 DKAP-ATLPELPLIPEIDDPDCVYQDVFRDLPMDWATLLENVMDVSHVPFTHHNSVGKRE 123
Query: 371 SVPSLVKFLT-----PASGLQGYWDPYPID-------MEFRPPCMVLSTIGISKPGKLEG 418
+ + LT ASG QG W P EF+ P ++ T+
Sbjct: 124 NATPVNLELTSADGVSASGFQGMWQEGPRKGKYGSQYTEFKAPTLMRHTL---------- 173
Query: 419 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY--LWRHFAEQVLNE 476
R A + +P++ + RLL R F S L F Y + H + + E
Sbjct: 174 ---RTEAFTTLTVVYAVPTTPGRCRLLARFPFIFKSALPRFFFGLYPQWFSHTNQNSILE 230
Query: 477 DLRLVLGQQERM---------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKP 527
D ++ L +QER+ + A +P D +R W + G P P
Sbjct: 231 DDQIFLHKQERLIEVDQKIKGKSYAQSCYMPTKADVYVSAFRKWITEIAGGGPAWPLGMP 290
>gi|260434502|ref|ZP_05788472.1| rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 8109]
gi|260412376|gb|EEX05672.1| rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 8109]
Length = 465
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 134/321 (41%), Gaps = 81/321 (25%)
Query: 218 WFPVAFSTDLK------------------DDTMEPWVIFRGKDGIPGCVQNTCAHRACPL 259
W+P+++ DL D W +F + C HR PL
Sbjct: 40 WWPISYVQDLDPNQPSRFTLLERDLVIWWDRAASSWRVF----------PDVCPHRLVPL 89
Query: 260 HLGSVNE-GRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIK--SLPCFEQEGMIWIW 312
G +NE G ++CPYHGW + G+C+++P +TQ N + + SLP +G++++W
Sbjct: 90 SEGRINEEGLLECPYHGWSFDGGGQCQRVPQALDNTQPNNRRSRCASLPTATGQGLLFVW 149
Query: 313 PGDEPPTATIPCLLP--------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 364
G P A P LP P + + + +LP++ LL+N+LD++H PFTH
Sbjct: 150 MG--APDAADPSQLPLVPALEDNPDSWTVQ-DTFRDLPMDAVTLLENVLDVSHVPFTHHR 206
Query: 365 TFAKGWSVPSLVKFLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR 422
T K + + +T ASG YW+ P + GKL Q+T
Sbjct: 207 TVGKRKNAAPVEASITGEDASGFTAYWEEGP------------------RRGKLGAQSTT 248
Query: 423 QCATHL--HQLHV-----------CLPSSRKKTRLLYRMSLDFASVLKHVPF-MQYLW-R 467
A L H L +P R + RL R F S + + ++ W +
Sbjct: 249 FNAPQLMWHDLTAKGFGRILTVVYAVPIRRGECRLFARFPFQFQSAVPRLLIGLRPRWLQ 308
Query: 468 HFAEQVLNEDLRLVLGQQERM 488
H + ED ++ L QER+
Sbjct: 309 HIGNHKVLEDDQVFLHWQERV 329
>gi|398990711|ref|ZP_10693884.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
gi|399013456|ref|ZP_10715761.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398113575|gb|EJM03420.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398143161|gb|EJM32041.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
Length = 371
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L N W+ V S+ L D M +P+V FR G+ + + C HR L +GS
Sbjct: 2 LTNLWYVVLPSSQLNDGLMPVQLLGQPFVAFRDYAGVAHVLSDICVHRGGSLSVGSKVGN 61
Query: 268 RIQCPYHGWEYSTDGKCEKMPST-QLR---NVKIKSLPCFEQEGMIWIWPGD-----EPP 318
+QCPYHGW + DG C ++P+ LR ++ + P E+ G IW + GD PP
Sbjct: 62 SVQCPYHGWRFGADGVCTQIPAQPDLRIPAKARVDAYPTLERYGWIWAFLGDLPESERPP 121
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
T+ + P+ + + + +++N LD AHAPF H STF
Sbjct: 122 LPTLDWIDDPAIRVVSGYFDWQASWDR--IIENGLDFAHAPFVHGSTFG 168
>gi|81300844|ref|YP_401052.1| hypothetical protein Synpcc7942_2035 [Synechococcus elongatus PCC
7942]
gi|81169725|gb|ABB58065.1| hypothetical protein Synpcc7942_2035 [Synechococcus elongatus PCC
7942]
Length = 345
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN+W+PVA + + D + E ++R G + + C HR L G V
Sbjct: 3 LKNYWYPVALAQKVGDRPLSVTLCGEAIALYRDSAGQIHALSDRCVHRGAALSGGWVEND 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIWIWPG-----DEP 317
+ CPYHGW+Y G C K+P+ + K+ E+ G++W++ G D P
Sbjct: 63 CLVCPYHGWQYDAQGHCRKIPANTEQQRIPFAAKVPHYDAIERYGLVWLFYGDLPEADRP 122
Query: 318 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P +P P+ + E+ + + +NL+D AHAPFTH+ +F
Sbjct: 123 PLPPLPEYDDPAWRTVQGEVTYT--THYTRVTENLMDFAHAPFTHSGSFG 170
>gi|300696759|ref|YP_003747420.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum CFBP2957]
gi|299073483|emb|CBJ52999.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum CFBP2957]
Length = 342
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 35/237 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ ++ D + E V +RG++G +++ C HR PL LG V +G
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGERMVFYRGQEGKVAALEDFCPHRGAPLSLGFVRDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEP---PTATIP 323
+ C YHG DGKC MP ++ I+ P E+ G IW+WPGD P
Sbjct: 63 HLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPAQIHH 122
Query: 324 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------GW 370
S + + + ++ L++DNL+DL H + H ++ + G
Sbjct: 123 LEWAESKTWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTRVEGD 182
Query: 371 SVPS--LVKFLTP----ASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGK 415
+V + ++ + P A+ L+G D P D F PP VL +G++ GK
Sbjct: 183 TVVTSRFMENIMPPPFWATALRGAGLADNVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|347528273|ref|YP_004835020.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136954|dbj|BAK66563.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 363
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 115/277 (41%), Gaps = 52/277 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ A++ ++ + + VI+R + +++ C HR PL G V EG
Sbjct: 5 LRNAWYASAYADEIGERPLARKLLDRDMVIYRDAEKQLAVLEDRCPHRFAPLSGGKVIEG 64
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIWIWPGD-----EPP 318
IQCPYHG + G C P + L+ + + P E+ G++WIWPGD E
Sbjct: 65 TIQCPYHGLRFDRTGACTHNPHMKGGGPLKAASVAAWPVLEKYGIVWIWPGDPERAREDA 124
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK- 377
I L P F + + ++ + + L++DNLLDL+HA + H +S L+
Sbjct: 125 LPRIDFLERPKDFSV-VKGLLHVRGHYELVVDNLLDLSHAAYIHPQFAGGQYSSEELLAA 183
Query: 378 --------------------FLTPAS--GLQGYWDPYPID----MEFRPPCMVLSTIG-- 409
PA+ L G+ P+ M + PP M+ +G
Sbjct: 184 TKQKLERRERSIVNHRIRSGLAAPAAHQALFGFDAQTPVHSESTMTWHPPAMLDFAVGSW 243
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 446
I K EG H+ QLH P + + +
Sbjct: 244 IDGTPKEEG-------AHIPQLHFITPETEFSSHYFF 273
>gi|148556168|ref|YP_001263750.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148501358|gb|ABQ69612.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 353
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 108/271 (39%), Gaps = 46/271 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LK W+ A S++++ + + +I+R DG P + + C HR PLHLG
Sbjct: 8 LKRAWYVAAMSSEVEGEALFHRRILGTSVMIYRLADGTPVAMHDRCPHRFAPLHLGQREG 67
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
I C YH + DG+C P R +++ P E+ G +WIW D P P
Sbjct: 68 DEIACRYHALRFDADGRCTHNPHGNGRIPDAARVRRFPLLERYGFLWIWMDDSDPD---P 124
Query: 324 CLLPPSG--FEIH----AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 376
LLP E H A+ M + + + L++DN++DL+H H +G P +
Sbjct: 125 ALLPDFSPLEEGHPNAVAQTYMHMDVNYELIIDNVMDLSHIDHVHGEIITTRGQLSPVVP 184
Query: 377 KFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGISKPGK 415
K + + W+ P P D+ + P + ++G +
Sbjct: 185 KVRERDTHISARWEWSQTPAMMIFAPFLPRPEDAARHYFDISWTAPANIQLSVGAVQDSD 244
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 446
G T Q + LH C P KT +
Sbjct: 245 DFGDATSQ-----YDLHTCTPEDAFKTHYFF 270
>gi|221215639|ref|ZP_03588601.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD1]
gi|221164468|gb|EED96952.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD1]
Length = 363
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 125/312 (40%), Gaps = 38/312 (12%)
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
P V++R DG +++ C HR PL LG++N + C YHG ++ DG+C +MPS +
Sbjct: 34 PIVVYRKVDGSAAALEDACWHRLLPLSLGTLNGDDVVCGYHGLVFAPDGRCVQMPSQETL 93
Query: 294 N--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPCLLPPSGFEIHAE-IVMELPIEHGLL 348
N ++S P E+ +W+W GD E IP L E + L ++ LL
Sbjct: 94 NPSACVRSFPVVERHRFVWVWMGDPLEADETLIPDLFQNDSVEWAGDGGTTHLQCDYRLL 153
Query: 349 LDNLLDLAHAPFTHTSTFAKG------WSVPSLVK---------------FLTPASGLQG 387
+DNL+DL H F H S+ ++V K F G +G
Sbjct: 154 IDNLMDLTHETFVHHSSIGNRAVAEAPFTVSRTEKTVEVTRWMVNIDPPPFFKKHLGKEG 213
Query: 388 YWDPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTR 443
P+D + F P V +G++ G + R +HV P +
Sbjct: 214 -----PVDRWQHITFHAPSTVTIDVGVAPTGTGAPEGDRSQGITGFVIHVSTPETETSCI 268
Query: 444 LLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDK 503
+ + ++ + + WR + ED ++ QQ ++ + P+ D
Sbjct: 269 YYWAIVRNYKLTSQR---LTTEWREAVRSIFAEDKAILEAQQAAVSRYPDRDFYPLNIDG 325
Query: 504 LGVRYRLWRDAL 515
+ R + D +
Sbjct: 326 GAILARRYIDQM 337
>gi|359462641|ref|ZP_09251204.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 458
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 154/342 (45%), Gaps = 53/342 (15%)
Query: 218 WFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 267
W+PVA DL P +VI++ KD V Q+ C HR PL G ++E G
Sbjct: 22 WYPVAPLEDLDPQRPTPITLLGQHFVIWQPKDSDQYLVFQDLCPHRLAPLSEGRIDEQTG 81
Query: 268 RIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
++ C YHGW++ G C +P Q + + S+P Q G++W+WP +P T
Sbjct: 82 QLMCSYHGWQFDQQGLCTHIPQAEAITPQQSQLYCVTSVPTQSQSGLLWVWP--DPDTQD 139
Query: 322 IPCL--LPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---KGW 370
I LP S F + + ++ +L + L++N+ D +H PF H +
Sbjct: 140 IAATQPLPLSPFVNADQNFVWSSVMRDLAYDWQTLVENVSDPSHVPFAHHGVQGNRNQAA 199
Query: 371 SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 430
+P V TP + ++ F+PPC V I GK T
Sbjct: 200 PIPMEVLTSTPELIEVQTTGKFSTNITFQPPCRVEYQFSIGD-GKQATMVT--------- 249
Query: 431 LHVCLPSSRKKTRLLYRMSLDFAS-VLKHVP-FMQYLWRHFAEQVLNEDLRLVLGQQERM 488
C+P + ++R++ + +FA+ ++K +P +++++ VL+ D+ L+ Q++++
Sbjct: 250 --YCIPIAPGRSRIVALFARNFATGLMKVIPRWVEHMKNR--NPVLDGDMILLRSQEKQL 305
Query: 489 ------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
+ ++ LP D+L + YR W + G Q+P+
Sbjct: 306 LQHTQTQSWQTIYKLPTSADRLVIEYRRWFEKYSHG--QIPW 345
>gi|229086002|ref|ZP_04218224.1| hypothetical protein bcere0022_26020 [Bacillus cereus Rock3-44]
gi|228697313|gb|EEL50076.1| hypothetical protein bcere0022_26020 [Bacillus cereus Rock3-44]
Length = 324
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 123/284 (43%), Gaps = 30/284 (10%)
Query: 218 WFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
W+ V FS D+ D ++ V+FR ++ V C HR L LGS+ +GR+ C
Sbjct: 18 WYAVCFSKDVIDKPIKRKIVGKDLVLFRNENHNIQAVHAYCPHRGADLSLGSIRKGRVTC 77
Query: 272 PYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
YHGWE+ G C +PS + + KS P E+ G+IW++P E +P L
Sbjct: 78 AYHGWEFDGGGTCVCIPSQPSKQIPKFAHTKSYPVMEKAGLIWVYPECEISKEELPILEI 137
Query: 328 PSGFE----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 383
E + + + +++++LD+ H F H +T KG S P L +
Sbjct: 138 FEEVEDINFVFSPYQAKWNAHFTRVVESVLDVVHLSFVHKNTIGKG-SNPELEEL----- 191
Query: 384 GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTR 443
++G D + + C + KP LEG+N + P ++T
Sbjct: 192 QIEGDLDSFSLKNGEAYLCYKFPQQWLLKP--LEGKNKK-----FINFVTFTPVDEEETL 244
Query: 444 LLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQER 487
+ +FA K +P + ++ ++ +VL ED +V Q R
Sbjct: 245 IFGLAGRNFA---KKMPLLHTIFSRYSLKVLKEDQLVVESQHPR 285
>gi|428304409|ref|YP_007141234.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
gi|428245944|gb|AFZ11724.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
Length = 468
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 141/344 (40%), Gaps = 43/344 (12%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPW-------VIFRGKDGIP-GCVQNTCAH 254
++G P K W+PV + DL + VI+ K G + + C H
Sbjct: 16 LAGGNDPARFDCKEAWYPVFYIEDLDKSKPSKFTLLGQDLVIWWDKQGNSWRALADQCPH 75
Query: 255 RACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLPCFEQE 306
R PL G + E G ++CPYHGW ++ +GKC+++P Q N + S P ++
Sbjct: 76 RLAPLSEGRIAEDGLLECPYHGWAFTGEGKCDRIPQQQAENKAHASQRACVASFPTVTRQ 135
Query: 307 GMIWIWPGDEPPTA---TIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 359
G+++I+PG EP A +P + P P G+ I +LP + LL+N+LD +H P
Sbjct: 136 GLLFIYPG-EPENAFNVKVPIIEPIEESPDGW-ICLNTFRDLPYDALTLLENVLDASHVP 193
Query: 360 FTHTSTFAKGWSVP--SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE 417
FTH + + L + G +G W+ P R + P +
Sbjct: 194 FTHHRSVGNRTNAAPVELEVVASDKQGFKGIWEEGP-----RKGTLGKQFTTFIAPALMW 248
Query: 418 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFAEQVL 474
T + + P + + R+ R F+S L + F++ + H + +
Sbjct: 249 HDLTSKQFGRTLTVVYATPIRKGECRIFARFPFKFSSKLPGL-FLKLTPRWYSHLGQNNV 307
Query: 475 NEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
ED ++ L QER N A + LP D R W
Sbjct: 308 LEDDQIFLHYQERYLAAKGGGANFAKAFYLPTRADTFVTALRKW 351
>gi|398996835|ref|ZP_10699679.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398125734|gb|EJM15199.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 357
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ A +L +D EP V++R DG P +++ C HR PL +G +
Sbjct: 3 LRNAWYVAAGEAELGEDLYPVTLLNEPVVLYRKSDGTPVALEDACPHRKLPLSMGRLKGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIPC 324
I+C YHG + G C P ++ + K++S P + G+IWIW GD + T C
Sbjct: 63 EIECGYHGLTFDCSGSCVHAPGSRRIPQGAKVRSYPLAVRYGLIWIWMGDLDLADETKIC 122
Query: 325 LLPPSG---FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
+P G + ++ M +P + + DNLLD AH + H S+F
Sbjct: 123 HVPEWGDPAWGLNRGDSMVIPCNYLYMTDNLLDPAHVAWVHQSSFGN 169
>gi|421865085|ref|ZP_16296769.1| putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Burkholderia cenocepacia H111]
gi|358074971|emb|CCE47647.1| putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Burkholderia cenocepacia H111]
Length = 359
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 102/242 (42%), Gaps = 47/242 (19%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LKN W+ VA + D D E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRATDGQVAALEDFCPHRGAPLSLGFVRD 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKTAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGDA--SEADPAK 119
Query: 326 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 362
LP + H + + ++ L++DNL+DL H + H
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPKTTS 179
Query: 363 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISK 412
TS F + P + +GL D P+D F PP V+ +G++
Sbjct: 180 HGDEVVTSRFMENVMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVAH 236
Query: 413 PG 414
G
Sbjct: 237 AG 238
>gi|440696445|ref|ZP_20878913.1| Rieske [2Fe-2S] domain protein [Streptomyces turgidiscabies Car8]
gi|440281329|gb|ELP68959.1| Rieske [2Fe-2S] domain protein [Streptomyces turgidiscabies Car8]
Length = 354
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 42/285 (14%)
Query: 209 PYNTRL-KNFWFPVAFSTDLKDDTM------EPWVIFRGKD-GIPGCVQNTCAHRACPLH 260
P+ T +N W+ A+S ++ + + EP V +R +D G P + + C HR PL
Sbjct: 2 PHTTAFARNQWYVAAYSHEVGRELLGRTILGEPLVFYRTEDEGTPVALADRCVHRRYPLS 61
Query: 261 LGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPP 318
++ RI C YHG+ Y T G C +P + R ++ S EQ+ +IW+W GD P
Sbjct: 62 ESGLDGDRIVCGYHGFTYDTTGACVYVPGQKRIPRTARVASYQVVEQDALIWVWIGD-PA 120
Query: 319 TA---TIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH----------- 362
A TIP L G+ + + + + ++GLL+DNLLDL+H + H
Sbjct: 121 LADADTIPRARHLDSPGW-VTVKGMEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAE 179
Query: 363 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 410
+ +G + + + F ++G++G + D+E+ PC+ L I
Sbjct: 180 TPINTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSRI 238
Query: 411 SKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 454
+ G L E + H + PS+ K + +S D+A+
Sbjct: 239 APVGVLPEADGSDPNGFHTEITYAITPSADGKVYDFWMVSRDWAT 283
>gi|295689725|ref|YP_003593418.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter segnis ATCC
21756]
gi|295431628|gb|ADG10800.1| Rieske (2Fe-2S) iron-sulfur domain protein [Caulobacter segnis ATCC
21756]
Length = 357
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 126/316 (39%), Gaps = 37/316 (11%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 295
VI RG+DG +++ C HR PL LG V +G + C YHG DG+ MP ++
Sbjct: 42 VIHRGRDGQAVALEDFCPHRGAPLSLGFVRDGELVCGYHGLAMGCDGRAASMPGQRVIGF 101
Query: 296 -KIKSLPCFEQEGMIWIWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 351
I++ P E+ G IW+WPGD P P S + + + ++ L++DN
Sbjct: 102 PAIRAFPVLERYGFIWVWPGDPAQADPAKLHPLFWAESPDWTYGGGLYHIACDYRLMVDN 161
Query: 352 LLDLAHAPFTH------------------------TSTFAKGWSVPSLVKFLTPASGL-- 385
L+DL H + H TS F +G P + +GL
Sbjct: 162 LMDLTHETYVHATSIGQKEIDEAPVTTKLEGDEVVTSRFMEGIHAPPFWRMALRGAGLPE 221
Query: 386 QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLL 445
D + I F P V+ +G++ G Q + P +
Sbjct: 222 DALVDRWQI-CRFSLPSHVMIEVGVALAGHGGYQAPADKKVSSVVVDFITPETETSHWYF 280
Query: 446 YRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLG 505
+ M+ FA + + R ++ +EDL ++ QQ+ + + L + D G
Sbjct: 281 WGMARSFA--VSDAALTDTI-REGQGKIFSEDLEMLERQQKNLLAWPDRKLLKLNIDAGG 337
Query: 506 VRYRLWRDALEKGAKQ 521
VR R+ A++K Q
Sbjct: 338 VRSRM---AIDKAIAQ 350
>gi|238024817|ref|YP_002909049.1| Vanillate monooxygenase [Burkholderia glumae BGR1]
gi|237879482|gb|ACR31814.1| Vanillate monooxygenase [Burkholderia glumae BGR1]
Length = 359
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 136/365 (37%), Gaps = 68/365 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ +++ + E V FRG+ G +++ C HR PL LG V +G
Sbjct: 3 LKNAWYVACTPDEIETGPLGRKICGESIVFFRGERGEVVALEDFCPHRGAPLSLGFVRDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEP--------- 317
R+ C YHG E DGK MP ++ + E+ G IW+WPGD
Sbjct: 63 RLVCGYHGLEMGCDGKVAGMPGQRVGGFPAARRYAAVERSGFIWVWPGDASHADPARLHH 122
Query: 318 -PTATIPCLLPPSG-FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------- 362
P A P G + IH ++ L++DNL+DL H + H
Sbjct: 123 LPWAEDPAWAYGGGLYHIHC--------DYRLMIDNLMDLTHETYVHASSIGQKEIDEAP 174
Query: 363 -----------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLST 407
TS F P K +GL D P+D F PP V+
Sbjct: 175 PKTVSRGDEVITSRFMHNIGAPPFWKMALRGNGLA---DDVPVDRWQICRFTPPSHVMIE 231
Query: 408 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFMQ 463
+G++ G + + P + + M+ +F A + +
Sbjct: 232 VGVAHAGNGGYDAPAELKASSIVVDFITPETETSIWYFWGMARNFRPDDAELTAQI---- 287
Query: 464 YLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLP 523
R ++ EDL ++ QQ+ + + L + D GV R D L + LP
Sbjct: 288 ---REGQGKIFAEDLEMLERQQQNLLAWPDRQLLKLNIDAGGVLSRKVIDRLLAEERALP 344
Query: 524 FMKPM 528
+P+
Sbjct: 345 AGRPV 349
>gi|433455970|ref|ZP_20414034.1| vanillate O-demethylase oxygenase component [Arthrobacter
crystallopoietes BAB-32]
gi|432196878|gb|ELK53298.1| vanillate O-demethylase oxygenase component [Arthrobacter
crystallopoietes BAB-32]
Length = 364
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 146/350 (41%), Gaps = 58/350 (16%)
Query: 216 NFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLG-SVNEGR 268
N W+ A+ ++ M P ++R +DG + + C HR PL +G ++ +
Sbjct: 20 NAWYVAAWDHEVTRKPMSRRIANRPVALYRTEDGKAVALADACWHRLAPLSMGKTIGKDG 79
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
IQCPYHG Y++ G+C MP+ + N + S P E+ +W+W GD PT P L+
Sbjct: 80 IQCPYHGIVYNSAGRCVSMPAQETINPSATVPSFPVVERYRYVWVWLGD--PTMADPDLV 137
Query: 327 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------- 368
P G IHA+ + L+LDNL+DL H F H+S+ +
Sbjct: 138 PDMHQMTSPEWAGDGETIHAD------CNYQLVLDNLMDLTHEEFVHSSSIGQEELSESD 191
Query: 369 ------GWSVPS---LVKFLTPASGLQGYWDPYP-----ID----MEFRPPCMVLSTIGI 410
G +V ++ P L+ D +P +D + F P + +G+
Sbjct: 192 FVVSHDGNTVTVTRWMLNIDAPPFWLKNMRDKFPGFEGKVDRWQIIRFEAPSTIRIDVGV 251
Query: 411 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 470
+K G + R + + ++ P + + + ++ L+ L R+
Sbjct: 252 AKAGTGAPEGDRSQGVNGYVMNTITPETDRSCHYFWAFMRNYR--LESQLITTQL-RNGV 308
Query: 471 EQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
V ED ++ QQE + N +NL + + VR + R + +G
Sbjct: 309 HGVFGEDEAMLKAQQEAIDANPDYEFYNLNIDGGGMWVRRLIERMLVAEG 358
>gi|433457370|ref|ZP_20415370.1| vanillate O-demethylase oxygenase, iron-sulfur subunit
[Arthrobacter crystallopoietes BAB-32]
gi|432194953|gb|ELK51530.1| vanillate O-demethylase oxygenase, iron-sulfur subunit
[Arthrobacter crystallopoietes BAB-32]
Length = 355
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ST++ + +P V+FR +D + + CAHRA PL G +
Sbjct: 7 NTWYVAAWSTEVTRKPIRRVICEQPIVLFRTQDNEAIALADRCAHRAFPLSEGRTIGDSV 66
Query: 270 QCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+C YHG+ Y DG C K+P ST +++ P EQ+G IW+W GD P P +P
Sbjct: 67 ECGYHGFTYGPDGMCTKVPAQSTIPERARVRKYPVVEQDGWIWVWTGD--PELANPADVP 124
Query: 328 PSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFAKGW 370
+ + + E H L+ DNLLDL H F H +T +
Sbjct: 125 DTHWMVDPEWATVTHSYHFKCRADLIHDNLLDLTHESFLHKTTVGDDY 172
>gi|75907526|ref|YP_321822.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75701251|gb|ABA20927.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 443
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 129/305 (42%), Gaps = 56/305 (18%)
Query: 250 NTCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVK---IKS 299
+ C HR PL G +++ G + C YHGW++ T+G C ++P + +N K + S
Sbjct: 51 DQCPHRLAPLSEGRIDDKTGNLMCSYHGWQFDTEGVCTRIPQAENPEIVTKNQKDFCVNS 110
Query: 300 LPCFEQEGMIWIWP-------GDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 352
LP ++ ++W+WP + P P + GF + V +L + L++N+
Sbjct: 111 LPVRQENDLLWVWPDVNSQELAHQTPLPLSPQVDASKGF-VWTSFVRDLEYDWQTLVENV 169
Query: 353 LDLAHAPFTH---TSTFAKGWSVPSLVKFLTP------ASGLQGYWDPYPIDMEFRPPCM 403
D +H PF H +G + P + TP A GL + F PPC
Sbjct: 170 ADPSHVPFAHHGVQGNREQGRARPISIMQSTPGLIEAVADGL------VTAKITFEPPCR 223
Query: 404 VLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQ 463
+ I + GK G T CLP S K+R++ + +FA L +
Sbjct: 224 LEYAISVGNDGKQLGLVT-----------YCLPVSPGKSRIVAQFPRNFAKTLHRL--TP 270
Query: 464 YLWRHFAEQ--VLNEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLWRDA 514
W H + VL+ D+ ++L QQE + + + +P D+L + +R W D
Sbjct: 271 RWWDHIKTRNLVLDGDM-ILLNQQEHLIQQRQLSASWKTAYKMPTSADRLVIEFRKWFDK 329
Query: 515 LEKGA 519
G
Sbjct: 330 YCDGG 334
>gi|259506673|ref|ZP_05749575.1| vanillate demethylase A [Corynebacterium efficiens YS-314]
gi|259165757|gb|EEW50311.1| vanillate demethylase A [Corynebacterium efficiens YS-314]
Length = 379
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 141/345 (40%), Gaps = 52/345 (15%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ A+ ++ + +P ++R +DG + + C HR PL G + GR
Sbjct: 25 NAWYVAAWDHEVTSKGIISRTIANKPLALYRTQDGRAVALADACWHRLAPLSKGKLT-GR 83
Query: 269 --IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
IQCPYHG Y++ G+C MP+ + N + S P EQ IW+W GD PT P
Sbjct: 84 DGIQCPYHGLVYNSAGRCMSMPAQETLNPSAAVASFPVVEQYRYIWVWLGD--PTLADPT 141
Query: 325 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK----------- 368
+P H E + + L+LDNL+DL H F H+S+ +
Sbjct: 142 TVPDMHQMTHPEWTGDGKTIAAACNYQLVLDNLMDLTHEEFVHSSSIGQDELSEADFEVT 201
Query: 369 ----GWSVPSLVKFLTPA-----------SGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
+V ++ + P G +G D + I + + P + +G++K
Sbjct: 202 HTEDSVTVSRWMRDIDPPPFWQKNMNDKFPGYEGKVDRWQI-IHYYYPSTICIDVGVAKA 260
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
G + R + + ++ P + + + + ++ + + R V
Sbjct: 261 GTGAPEGDRSQGVNGYVMNTITPETDRSSHYFWSFQRNYRLDSQ---LITTQLRDGVHGV 317
Query: 474 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALE 516
ED ++ QQE + N +NL + + VR R+ ALE
Sbjct: 318 FGEDEEMLTAQQEAIDANPDYEFYNLNIDAGGMWVR-RILEKALE 361
>gi|402567996|ref|YP_006617340.1| Vanillate monooxygenase [Burkholderia cepacia GG4]
gi|402249193|gb|AFQ49646.1| Vanillate monooxygenase [Burkholderia cepacia GG4]
Length = 373
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 102/243 (41%), Gaps = 43/243 (17%)
Query: 211 NTRLKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
N LKN W+ VA + D D E V +R DG +++ C HR PL LG
Sbjct: 14 NVFLKNAWY-VACTPDEIDGKPLGRKICNESMVFYRAADGQVAALEDFCPHRGAPLSLGF 72
Query: 264 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTA 320
V +G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD E A
Sbjct: 73 VRDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPVVERYGFVWVWPGDASEADPA 132
Query: 321 TIPCL-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH----------------- 362
+P L H + + ++ L++DNL+DL H + H
Sbjct: 133 RLPALQWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAPPKTT 192
Query: 363 -------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGIS 411
TS F + P + +GL D P+D F PP V+ +G++
Sbjct: 193 GNGDEVVTSRFMENVMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVA 249
Query: 412 KPG 414
G
Sbjct: 250 HAG 252
>gi|221210451|ref|ZP_03583431.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD1]
gi|421478825|ref|ZP_15926554.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
gi|221169407|gb|EEE01874.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD1]
gi|400223985|gb|EJO54251.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
Length = 347
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ + + E V FR +G +++ C HR PL LG+V +G
Sbjct: 3 LKNAWYVACTPDEFASKPLGRQICGERMVFFRDGEGTVAALEDFCPHRGAPLSLGTVRDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGKC MP ++ + I+ P E+ G +W+WPGD P P +
Sbjct: 63 HLVCGYHGLTMGADGKCTSMPCQRVGGIPAIRRYPAVERYGFVWVWPGD--PAQADPATI 120
Query: 327 PPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + + + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 HPLHWADDPGWAYGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|229590745|ref|YP_002872864.1| oxidoreductase subunit alpha [Pseudomonas fluorescens SBW25]
gi|229362611|emb|CAY49519.1| oxidoreductase alpha subunit [Pseudomonas fluorescens SBW25]
Length = 353
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 105/243 (43%), Gaps = 49/243 (20%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + E V +RG++G V++ C HR PL LG V+ G
Sbjct: 4 KNTWYVACTPDEIAQKPLGRQICGEKMVFYRGQEGAVVAVEDFCPHRGAPLSLGYVDNGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ + P L+
Sbjct: 64 LVCGYHGLVMGGDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--SQADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + ++ ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ +QG +W D P+D F PP VL +G++
Sbjct: 177 TTVQGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGK 415
GK
Sbjct: 237 AGK 239
>gi|399076244|ref|ZP_10751897.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398037577|gb|EJL30762.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 340
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 137/341 (40%), Gaps = 69/341 (20%)
Query: 212 TRLKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
T L N W+ A+S ++ + P V++R + + + C HR PL +G +
Sbjct: 2 TYLYNAWYAAAWSHEISETLFSRTFLDIPVVLYRNAEAKVIALHDRCPHRFAPLSMGQIV 61
Query: 266 EGRIQCPYHGWEYSTDGKC--EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPP--TAT 321
EGR++C YHG + G C M + + K+++ EQ+ M+WIW GD P TA
Sbjct: 62 EGRLRCGYHGLSFDEAGACVHSLMSTVAPKAAKVRAFAVHEQDKMVWIWMGDAAPGDTAA 121
Query: 322 IPCLLPPSGFEIHAEIVMELPI-------EHGLLLDNLLDLAHAPFTHTS-------TFA 367
IP L H + VM ++ LL DNL+DL H H +
Sbjct: 122 IPRL------PHHTDEVMSCNFGLTTAKADYRLLSDNLMDLTHTALLHPAFGGLDYIAKT 175
Query: 368 KGWS----------VPSLVKFLTPASGLQGY------WDPYPIDMEFRPPCMVLSTIGIS 411
K W V + F P + L+ + W P +L +
Sbjct: 176 KSWEEDGQVVSDHVVEDMPAFFAPGTDLKVHNRDTIRW--------IAPATHILES---- 223
Query: 412 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 471
++ + T++ H+ P SRK T + + S + M L + F
Sbjct: 224 ---RITPMDDANWETYIPSAHILTPESRKTTHYFWSSASHKDSGVSDEAMMATLIQAFD- 279
Query: 472 QVLNEDLRLVLGQQERMNNGANVWNL-PV--GYDKLGVRYR 509
ED +V Q+RM + A++W+L PV D GVR R
Sbjct: 280 ---FEDKPMVEAVQQRMGD-ADLWDLNPVLLPADAGGVRVR 316
>gi|238059738|ref|ZP_04604447.1| oxygenase alpha subunit [Micromonospora sp. ATCC 39149]
gi|237881549|gb|EEP70377.1| oxygenase alpha subunit [Micromonospora sp. ATCC 39149]
Length = 347
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++ W+ A+ +++ + EP V++R G + + C HR PL ++
Sbjct: 5 RDQWYVAAYGSEVGRGLLARTVLGEPLVLYRTGAGAAVALADRCVHRRYPLSESRLDGDT 64
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPT--ATIPC 324
I C YHG+ Y G C +P Q R ++ S P EQ+ IW+W GD ATIP
Sbjct: 65 IVCGYHGFTYDPTGACVFVPGQQRIPRTARVTSYPVVEQDSFIWVWIGDRDRADPATIPR 124
Query: 325 L--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------TSTFAK 368
L G+ + + L +GLL+DNL+DL+H + H T+ +
Sbjct: 125 APWLADPGYAV-VRGMAPLNARYGLLVDNLMDLSHETYLHGGYIGTPEVANTPITTEVDE 183
Query: 369 GWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG---KL 416
+ + + F ++G+QG + D+E+ PPC+ L I+ G
Sbjct: 184 DRGIVYVSRHMDDAECPPFYARSTGIQGRITRWQ-DIEYHPPCLYLLHSRIAPRGVHPPA 242
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
EG+++ A H ++ PS+ T + ++ DFA
Sbjct: 243 EGEDS--AAFHAEIVYAITPSTEHTTYDFWAVARDFA 277
>gi|434402833|ref|YP_007145718.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
gi|428257088|gb|AFZ23038.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
Length = 443
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 123/297 (41%), Gaps = 42/297 (14%)
Query: 250 NTCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKS 299
+ C HR PL G V++ G + C YHGW++ G C +P + RN + S
Sbjct: 51 DQCPHRLAPLSEGRVDDKTGNLMCSYHGWQFDEQGICTHIPQAENPELVAKNQRNFCVVS 110
Query: 300 LPCFEQEGMIWIWPGDEPP--TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNL 352
LP ++ ++W+WP + A P L P GF + + V +L + L++N+
Sbjct: 111 LPVRQENDLLWVWPDADSTELAANTPLPLSPQIDVKKGF-VWSSYVRDLEYDWQTLVENV 169
Query: 353 LDLAHAPFTHTSTFA-KGWSVPSLVKFLTPASGL--QGYWDPYPIDMEFRPPCMVLSTIG 409
D +H PF H + + P + + L + + F PPC + I
Sbjct: 170 ADPSHVPFAHHGVQGNRETATPIALNIIKSTENLIEASTAGRFQTTITFEPPCRLEYAIS 229
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 469
+ K G T C+P S K R++ + +FA L F+ W H
Sbjct: 230 VPNSDKQLGLVT-----------YCIPVSPGKCRIVAQFPRNFAKTLHR--FIPRWWNHI 276
Query: 470 A--EQVLNEDLRL------VLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
QVL+ D+ L +L Q++ + + LP D+L + +R W D +G
Sbjct: 277 KTRNQVLDGDMILLHQQEYLLQQKQLSESWKTAYKLPTSADRLVIEFRNWFDKYCQG 333
>gi|25027190|ref|NP_737244.1| vanillate O-demethylase oxygenase [Corynebacterium efficiens
YS-314]
gi|23492471|dbj|BAC17444.1| putative vanillate O-demethylase oxygenase subunit A
[Corynebacterium efficiens YS-314]
Length = 433
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 141/345 (40%), Gaps = 52/345 (15%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ A+ ++ + +P ++R +DG + + C HR PL G + GR
Sbjct: 79 NAWYVAAWDHEVTSKGIISRTIANKPLALYRTQDGRAVALADACWHRLAPLSKGKLT-GR 137
Query: 269 --IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
IQCPYHG Y++ G+C MP+ + N + S P EQ IW+W GD PT P
Sbjct: 138 DGIQCPYHGLVYNSAGRCMSMPAQETLNPSAAVASFPVVEQYRYIWVWLGD--PTLADPT 195
Query: 325 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK----------- 368
+P H E + + L+LDNL+DL H F H+S+ +
Sbjct: 196 TVPDMHQMTHPEWTGDGKTIAAACNYQLVLDNLMDLTHEEFVHSSSIGQDELSEADFEVT 255
Query: 369 ----GWSVPSLVKFLTPA-----------SGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
+V ++ + P G +G D + I + + P + +G++K
Sbjct: 256 HTEDSVTVSRWMRDIDPPPFWQKNMNDKFPGYEGKVDRWQI-IHYYYPSTICIDVGVAKA 314
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
G + R + + ++ P + + + + ++ + + R V
Sbjct: 315 GTGAPEGDRSQGVNGYVMNTITPETDRSSHYFWSFQRNYRLDSQ---LITTQLRDGVHGV 371
Query: 474 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALE 516
ED ++ QQE + N +NL + + VR R+ ALE
Sbjct: 372 FGEDEEMLTAQQEAIDANPDYEFYNLNIDAGGMWVR-RILEKALE 415
>gi|334140725|ref|YP_004533927.1| vanillate monooxygenase [Novosphingobium sp. PP1Y]
gi|333938751|emb|CCA92109.1| vanillate monooxygenase [Novosphingobium sp. PP1Y]
Length = 354
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
++N W+ A+ ++ ++ M + W+I R DG + + C HR PL G +
Sbjct: 14 VRNLWYMAAWDDEIPENGMLSRTLLDDKWLIARLSDGSYAMLADRCPHRFVPLSKGKLEA 73
Query: 267 GRIQCPYHGWEYSTDGKC--EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
I CPYHG + G C P+ +V+ +++P + +W WPGD P P
Sbjct: 74 DVIHCPYHGLGFDRTGACVHNPFPAEPPAHVRARTMPVVHRHHGLWFWPGD--PQKADPA 131
Query: 325 LLPPSGFEIHAEIVMELPIEHG---LLLDNLLDLAHAPFTHTSTFAKGWSV 372
L+P GF A + + G LL DNL+DL HA F H ++F S+
Sbjct: 132 LIPDFGFVERAGMSRSRLVIKGHYELLTDNLMDLTHAEFLHVTSFGVNGSI 182
>gi|377811423|ref|YP_005043863.1| Rieske (2Fe-2S) protein [Burkholderia sp. YI23]
gi|357940784|gb|AET94340.1| Rieske (2Fe-2S) region [Burkholderia sp. YI23]
Length = 428
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQNTCAH 254
+GP P + FW P S +L + EP + FR +G G + CAH
Sbjct: 13 TGPGAPMGELFRRFWLPALLSEELAEPGGEPVRLQLLSERMLAFRDSEGKLGLIDEFCAH 72
Query: 255 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFEQEGMI 309
R L G EG I+CPYHGW+Y +G+C +PS +K+KS P EQ G+I
Sbjct: 73 RGVSLWFGRNEEGGIRCPYHGWKYDVNGQCVDVPSEPAASGYCNKIKLKSYPLVEQGGVI 132
Query: 310 WIWPG---DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
W++ G ++PP P+G + + E L+ +D +H F H+ +
Sbjct: 133 WVYMGPKDEQPPLPAFEFSTVPAGQSFMTKRLQECNWLQA--LEGGVDSSHVSFLHSGSL 190
>gi|421896325|ref|ZP_16326722.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum MolK2]
gi|206587490|emb|CAQ18072.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum MolK2]
Length = 342
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 35/237 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ ++ D + E V +RG +G +++ C HR PL LG V +G
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGERMVFYRGPEGKVAALEDFCPHRGAPLSLGFVRDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEP---PTATIP 323
+ C YHG DGKC MP ++ I+ P E+ G IW+WPGD P
Sbjct: 63 HLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPAQIHH 122
Query: 324 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------GW 370
S + + + ++ L++DNL+DL H + H ++ + G
Sbjct: 123 LEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTRVEGD 182
Query: 371 SVPS--LVKFLTP----ASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGK 415
+V + ++ + P A+ L+G D P D F PP VL +G++ GK
Sbjct: 183 TVVTSRFMENIMPPPFWATALRGAGLADNVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|386335217|ref|YP_006031387.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum Po82]
gi|334197667|gb|AEG70851.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum Po82]
Length = 342
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%), Gaps = 35/237 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ ++ D + E V +RG +G +++ C HR PL LG V +G
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGERMVFYRGPEGKVAALEDFCPHRGAPLSLGFVRDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEP---PTATIP 323
+ C YHG DGKC MP ++ I+ P E+ G IW+WPGD P
Sbjct: 63 HLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPARIHH 122
Query: 324 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------GW 370
S + + + ++ L++DNL+DL H + H ++ + G
Sbjct: 123 LEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTRVEGD 182
Query: 371 SVPS--LVKFLTP----ASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGK 415
+V + ++ + P A+ L+G D P D F PP VL +G++ GK
Sbjct: 183 TVVTSRFMENIMPPPFWATALRGAGLADNVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|423095040|ref|ZP_17082836.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
gi|397886387|gb|EJL02870.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
Length = 346
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L N W+ ++ +L + + P V FR G+ + + C HR PLH+G V
Sbjct: 4 LLNTWYIAGWADELAQEALLGRTIVERPVVFFRDSQGVIQAIDDRCPHRFAPLHMGKVVG 63
Query: 267 GRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
IQCPYHG + GKC P T + ++ P E+ G IW+W GD P
Sbjct: 64 DSIQCPYHGLRFDGAGKCTHNPHGEGTIPKAACVRGYPVVERHGAIWVWLGD--PALASD 121
Query: 324 CLLPPSGF----EIHAEIVMELPI--EHGLLLDNLLDLAHAPFTHTSTFAKG 369
L+P F HA+ LP + LL DN++DL+H F H T G
Sbjct: 122 ALIPDFSFFEQAPTHAKGKGYLPTRAHYELLSDNIMDLSHVDFLHPDTLGGG 173
>gi|434388981|ref|YP_007099592.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428019971|gb|AFY96065.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 321
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 215 KNFWFPVAF------STDLKDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ V F S L V++R DG + N C HR L G +
Sbjct: 3 KNLWYAVEFCNAIGTSPKLLKILDRELVLYRTADGRIRAIDNNCIHRGAALANGWIENDC 62
Query: 269 IQCPYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWIWPGDE-----PP 318
I CPYHGW+Y TDG C K+PS T + K+ P E+ G IW++ GDE P
Sbjct: 63 IVCPYHGWQYQTDGTCSKIPSQAATATIPKPAKMAVYPVGEKYGWIWLFLGDEMAGEIPT 122
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P L + I E E +L+N LD AHAPF H+ F
Sbjct: 123 IPNFPQLESDAIRSIQGEFYWNANYER--VLENGLDFAHAPFVHSGAFGN 170
>gi|319792598|ref|YP_004154238.1| rieske (2fe-2S) iron-sulfur domain [Variovorax paradoxus EPS]
gi|315595061|gb|ADU36127.1| Rieske (2Fe-2S) iron-sulfur domain [Variovorax paradoxus EPS]
Length = 369
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 49/318 (15%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ +++ + + V+FR DG +++ C HR PL LG + +
Sbjct: 11 NAWYAAAYDVEVRHALLSRTICNQKVVLFRRTDGQVAVLEDACWHRLMPLSLGRLEGDEL 70
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG Y++ G+C MPS + N ++S P E+ +WIWPGD P P L+P
Sbjct: 71 VCGYHGLVYNSQGRCTHMPSQETLNPSACVRSFPVVEKHRFVWIWPGD--PAKADPALVP 128
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------GW 370
+ ++ + ++ L++DNL+DL H F H S+ G
Sbjct: 129 DMHWNDDPAWAGDGKMIRVNCDYRLVVDNLMDLTHETFVHGSSIGNREVAEAPFVATHGD 188
Query: 371 SVPSLVKFLTP-------------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG--- 414
++ +++ A G G D + I + F PC V +G+++ G
Sbjct: 189 RSATVTRWMEGIDAPPFWGGQIRHARGYTGKVDRWQI-IRFEGPCTVNIDVGVAEAGSGA 247
Query: 415 --KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
K R + + L+ P + K + + ++ + + + R
Sbjct: 248 VPKDGNPGDRSKGVNGYVLNTITPETDKTCLYFWAFARNYCLGEQR---LTHELREGVAG 304
Query: 473 VLNEDLRLVLGQQERMNN 490
+ ED ++ QQ+ M++
Sbjct: 305 IFREDELVLEAQQKAMDD 322
>gi|221200592|ref|ZP_03573633.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2M]
gi|221208419|ref|ZP_03581421.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2]
gi|421472997|ref|ZP_15921148.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
gi|221171607|gb|EEE04052.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2]
gi|221179164|gb|EEE11570.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2M]
gi|400221927|gb|EJO52348.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
Length = 347
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ + + E V FR G +++ C HR PL LG+V +G
Sbjct: 3 LKNAWYVACTPDEFASKPLGRQICGERMVFFRDGQGTVAALEDFCPHRGAPLSLGTVRDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGKC MP ++ + I+ P E+ G +W+WPGD P P +
Sbjct: 63 HLVCGYHGLTMGADGKCTSMPCQRVGGIPAIRRYPAVERYGFVWVWPGD--PAQADPATI 120
Query: 327 PPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + + + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 HPLHWADDPGWAYGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|107025482|ref|YP_622993.1| Rieske (2Fe-2S) protein [Burkholderia cenocepacia AU 1054]
gi|116693336|ref|YP_838869.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105894856|gb|ABF78020.1| Rieske (2Fe-2S) region [Burkholderia cenocepacia AU 1054]
gi|116651336|gb|ABK11976.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia HI2424]
Length = 359
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LKN W+ VA + D D E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRAADGQVAALEDFCPHRGAPLSLGFVRD 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKPAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGDA--SEADPAK 119
Query: 326 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
LP + H + + ++ L++DNL+DL H + H S+ +
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|372270603|ref|ZP_09506651.1| Rieske (2Fe-2S) domain-containing protein [Marinobacterium stanieri
S30]
Length = 377
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+ N W+ VA S ++ + M V+FR +DG P + N C HR+ PL ++
Sbjct: 25 IYNEWYVVALSREIDRELMARTVLDRQLVLFRKEDGTPVALDNRCGHRSFPLSRSALEGD 84
Query: 268 RIQCPYHGWEYSTDGKCEKMPST-QLRNVKIKSLPCFEQEGMIWIWPG--DEPPTATIPC 324
+ C YHG Y +G+C ++PS + I+S P +Q ++WIW G +E + IP
Sbjct: 85 TVVCGYHGLRYDENGQCVEVPSQCSCAGISIRSYPLHQQGPVVWIWMGEPEEADISKIPA 144
Query: 325 LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
+ + +E M L + L +NLLDL H F H TF
Sbjct: 145 MPMLEEGWVTSEDYMPLKASYVYLHENLLDLTHLSFLHAKTFG 187
>gi|428169222|gb|EKX38158.1| hypothetical protein GUITHDRAFT_50255, partial [Guillardia theta
CCMP2712]
Length = 366
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 129/296 (43%), Gaps = 58/296 (19%)
Query: 218 WFPVAFSTDLKDD----------TMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE- 266
W+PV+ + DLK D + W + G C + C HR PL G +++
Sbjct: 5 WYPVSPAKDLKKDQPNQVVLLGLDLVVW--WHQPSGTWSCFADECPHRLAPLSEGRIDKN 62
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQ-EGMIWIWPGDEPPTA----- 320
G +QC YHGWE+S G CE++P + +K C G++WI+P + A
Sbjct: 63 GNLQCAYHGWEFSEKGSCERIPQDSMDTMKCDKKACATSYPGLLWIFPDTDRNLAMSKSP 122
Query: 321 -TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLVKF 378
IP P+ + + ++P L++NL+D +H PF H A+ P +
Sbjct: 123 KIIPQFDDPAFVDPTNFFMRDVPYGWDTLIENLVDPSHVPFAHHGLIEARDQGRPINLYV 182
Query: 379 LTPASGLQGYWDPYPIDME--------------FRPPCMVLSTIGISKPGKLEGQNTRQC 424
+ +G +GY DM+ FRPPC+ IS P K
Sbjct: 183 ESHEAGFEGY------DMDQNSTSRRCGIVSSKFRPPCL------ISDPEK--------N 222
Query: 425 ATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-VLKHVPFMQYLW-RHFAE-QVLNED 477
+T L C+P++ +RL+ R F + ++ ++ MQ W H ++ QV++ D
Sbjct: 223 STFLGLGTYCIPTAPGHSRLITRFPFRFPNQIVANIVRMQPRWMTHLSQNQVIDSD 278
>gi|330992786|ref|ZP_08316730.1| Chlorophyllide a oxygenase [Gluconacetobacter sp. SXCC-1]
gi|329760264|gb|EGG76764.1| Chlorophyllide a oxygenase [Gluconacetobacter sp. SXCC-1]
Length = 333
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 13/184 (7%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL++FW+ + +L D + V++R +DG P V + C HR+ L G+V E
Sbjct: 10 RLRDFWYCLFPMHELSDAPRAFRLLGQDIVVWRDEDGRPHAVIDRCPHRSARLSGGTVEE 69
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
GRI CPYHGW + DG+C +P + +K+L C E+ G +W+ PG+ P +P
Sbjct: 70 GRIVCPYHGWAFRGDGRCVSVPQSVTNAGPQFGVKALHCTERYGQVWVCPGE--PAFDLP 127
Query: 324 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 381
+ G+ E + +++N D AH F H +F P+
Sbjct: 128 HVPHFEKPGYRQIFEFSEDWACSAQRIIENEFDTAHFSFVHKGSFGDSDPAPARTDITET 187
Query: 382 ASGL 385
+G
Sbjct: 188 ETGF 191
>gi|260221223|emb|CBA29571.1| Vanillate O-demethylase oxygenase subunit [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 351
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 17/167 (10%)
Query: 216 NFWFPVAFSTDLKDD-------TMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ A S ++ D P +FR G+ V++ C HR PL LG V
Sbjct: 5 NTWYVAARSEEIPSDRPLGRRICNIPMALFRNSAGVSAAVEDFCPHRGAPLSLGKVEGDT 64
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPCL 325
+ C YHG DGK MP + R I+S P E+ G +W+WPGD + A+IP
Sbjct: 65 LVCGYHGLAMGCDGKTVSMPCQRTRGFPAIRSFPIHEEHGFVWVWPGDAAKADVASIPKF 124
Query: 326 L----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P G+ + E+ ++ L++DNL+DL H + H+++ +
Sbjct: 125 EWLGNPQFGY---GGGLYEIACDYRLMIDNLMDLTHETYVHSTSIGQ 168
>gi|428222533|ref|YP_007106703.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427995873|gb|AFY74568.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 345
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 19/189 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+ FW+PV +L D + V++ + G P ++ C HR+ L LG+V G
Sbjct: 9 LRKFWYPVIPIANLSDGPKSFTLLEQKIVLWLDELGKPAAAKDQCCHRSAQLSLGTVENG 68
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTATIP 323
I CPYHGW++ G C +P +Q +V +I + C E+ G +W+ + P A +P
Sbjct: 69 AIVCPYHGWQFDRAGNCVHIPQSQNISVPSASRINAYKCTERYGYVWVCLDE--PIAEVP 126
Query: 324 CLLPPSGFEIHAEIVMEL--PIE-HGL-LLDNLLDLAHAPFTHTSTF-AKGWSVPSLVKF 378
+ FE + ++ E P + GL +++N D AH F HT TF +K P L++
Sbjct: 127 TIT--EAFEPNFRLIREFYEPWKCAGLRVMENEFDFAHPTFVHTGTFGSKDHPTPELLEI 184
Query: 379 LTPASGLQG 387
+ GL+G
Sbjct: 185 VETPEGLKG 193
>gi|119493134|ref|ZP_01624040.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
gi|119452788|gb|EAW33964.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
Length = 443
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 125/303 (41%), Gaps = 54/303 (17%)
Query: 250 NTCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMP--------STQLRNVKIKS 299
+ C HR PL G V+E G + C YHGWE+ +G C +P S N
Sbjct: 51 DECPHRLAPLSEGRVDENTGNLMCSYHGWEFDQNGICTSIPQAEKPEIVSKNKENFCATQ 110
Query: 300 LPCFEQEGMIWIW--PGDEPPTATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNL 352
P E ++W+W P A P L P GF + + V +L + L++N+
Sbjct: 111 FPTQEANDLLWVWADPNSSEQAAKTPLPLSPQIDASQGF-VWSSFVRDLEYDWQTLVENV 169
Query: 353 LDLAHAPFTH---TSTFAKGWSVPSLVKFLTPASGL-----QGYWDPYPIDMEFRPPCMV 404
D +H PF H KG P +K + L QG+++ + F PPC +
Sbjct: 170 ADPSHVPFAHHGVQGNRKKG--SPIHLKIIESNLNLIEAKYQGFFN---TKITFEPPCRL 224
Query: 405 LSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY 464
I GK G T CLP S K+R++ + + +F+ L + +
Sbjct: 225 EYAIEFGSDGKQVGLVT-----------YCLPVSPGKSRIVAQFTRNFSQRLNKI--IPR 271
Query: 465 LWRHFAEQ--VLNEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLWRDAL 515
W H + VL+ D+ + L QQER+ + + LP D+L + +R W +
Sbjct: 272 WWEHVKTRNLVLDGDM-IFLHQQERLLQQKQKTESWKTAYKLPTEADRLVIEFRKWFEQY 330
Query: 516 EKG 518
G
Sbjct: 331 SGG 333
>gi|399002921|ref|ZP_10705597.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM18]
gi|398123837|gb|EJM13371.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM18]
Length = 348
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 133/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEKMVFYRGHEGKVAAVEDFCPHRGAPLSLGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 64 LVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--ALADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
G +Q + P + + M+ +F + R +
Sbjct: 237 AGHGGYHAPQQLKASSIVVDFITPETETSIWYFWGMARNFNP---QDEALTASIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ +EDL ++ QQ+ + + L + D GV+ R
Sbjct: 294 IFSEDLEMLERQQQNLLSHPARNLLKLNIDAGGVQSR 330
>gi|88809638|ref|ZP_01125145.1| hypothetical protein WH7805_00500 [Synechococcus sp. WH 7805]
gi|88786388|gb|EAR17548.1| hypothetical protein WH7805_00500 [Synechococcus sp. WH 7805]
Length = 440
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 129/317 (40%), Gaps = 59/317 (18%)
Query: 218 WFPVAFSTDLKDDTMEPWVIFR--------GKDGIPGCVQNTCAHRACPLHLGSVNE-GR 268
W+PVA+ DL + + + G + + C HR PL G +N G
Sbjct: 9 WWPVAYLRDLDPGKPQRFTLLERDLVLWWDGVNSTWRAFNDVCPHRLVPLSEGRINSAGD 68
Query: 269 IQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
++CPYHGW ++ +G C ++P + R SLP +G++++W GD +
Sbjct: 69 LECPYHGWSFNGEGHCTRIPQMGDAGRARGRRSNCASLPTRSAQGLLFVWSGDPEKAESN 128
Query: 323 PCLLPPSGFE---------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 373
L PS E I + +LP++ LL+N+LD++H PFTH T K +
Sbjct: 129 DLPLVPSLQEEGDGWADGWIVQDTFRDLPMDALTLLENVLDVSHVPFTHHKTVGKRENAA 188
Query: 374 SLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL--H 429
++ + SG + WD P + G+L Q T A L H
Sbjct: 189 PVLAVIQSEDDSGFEAVWDEGP------------------RRGRLGSQFTHFKAPQLMWH 230
Query: 430 QLHV-----------CLPSSRKKTRLLYRMSLDFASVL-KHVPFMQYLW-RHFAEQVLNE 476
L +P R + RL R F S L K V ++ W +H + E
Sbjct: 231 DLDAKGFARILTVVYAVPIRRGQCRLFARFPFQFKSALPKVVVGLRPRWLQHIGNHKVLE 290
Query: 477 DLRLVLGQQERMNNGAN 493
D ++ L QER+ A
Sbjct: 291 DDQVFLHWQERVLESAG 307
>gi|403527463|ref|YP_006662350.1| vanillate O-demethylase oxygenase component [Arthrobacter sp.
Rue61a]
gi|403229890|gb|AFR29312.1| vanillate O-demethylase oxygenase component [Arthrobacter sp.
Rue61a]
Length = 367
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 143/353 (40%), Gaps = 60/353 (16%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 267
N WF + ++ + P ++R DG + + C HR PL G V
Sbjct: 20 NAWFVAGWDHEISAKGILARTIAGRPLALYRTGDGRAVALADACWHRLAPLSQGKLVGRD 79
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
IQCPYHG Y+ G+C MP+ + N + S P E+ +W+W GD PT P L
Sbjct: 80 EIQCPYHGLRYNAAGRCTSMPAQETLNPSATVPSFPVVERYRYVWVWLGD--PTKADPGL 137
Query: 326 LPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------ 368
LP G IHA P + L+LDNL+DL H F H+S+ +
Sbjct: 138 LPDMHQLDSPEWAGDGETIHA------PCNYQLVLDNLMDLTHEEFVHSSSIGQEELSES 191
Query: 369 ------GWSVPSLVKFL----TPASGLQGYWDPYP-----ID----MEFRPPCMVLSTIG 409
+ ++ +++ P L+ D +P +D + + P + +G
Sbjct: 192 EFEVTHDETSVTVTRWMRNIDAPPFWLKNMRDKFPDFEGKVDRWQIIHYYFPSTICIDVG 251
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 469
+++ G + R + + ++ P + + + ++ L+ L R+
Sbjct: 252 VAEAGTGAPEGDRSRGVNGYVMNTITPETERSCHYFWAFMRNYR--LESQLITTQL-RNG 308
Query: 470 AEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKGAK 520
V ED ++L QQ + N +NL + + VR RL ALE ++
Sbjct: 309 VHGVFGEDEAMLLAQQAAIDANPDYEFYNLNIDMGGMWVR-RLLERALEAESR 360
>gi|86747254|ref|YP_483750.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
gi|86570282|gb|ABD04839.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
Length = 355
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 38/257 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+P+ +S D+ V++R + G P + + C HR PL +G +
Sbjct: 12 RNNWYPLTWSRDVTRALGCHRILGIDLVVYRSEAGEPIALDDVCPHRLAPLSIGKLKGDA 71
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
I+C YHG ++ DG+C ++P + N ++ S P E+ G++WIWPGD P P L+
Sbjct: 72 IECGYHGMTFARDGRCIRIPGQPIIPPNARVPSYPLHEKMGLVWIWPGD--PALADPALI 129
Query: 327 -------PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 379
P H + + + + L DNL D AH F H ST S V+
Sbjct: 130 YDLPQYGQPDWHAAHGD-ALRIGTNYLNLADNLCDPAHVSFVHLSTLGNAASEEIPVEHT 188
Query: 380 TPASGLQGY-W--DPYPIDM-----------------EFRPPCMVLSTIGISKPGKLEGQ 419
A G+ + W D PI + ++R P + + G ++ G +
Sbjct: 189 VNARGVLVWRWINDAPPIPLFAKYGSFTGHVDRWHYYDYRAPSIAVIDFGSAEAGAIADP 248
Query: 420 NTRQCATHLHQLHVCLP 436
R + H P
Sbjct: 249 EQRDAGLRIFACHFITP 265
>gi|416979262|ref|ZP_11937843.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. TJI49]
gi|325519917|gb|EGC99179.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. TJI49]
Length = 359
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LKN W+ VA + D D + E V +R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKLLGRKICGESMVFYRTADGSVAALEDFCPHRGAPLSLGFVRD 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEP-------- 317
G + C YHG E DGK MP ++ I+S P E+ G IW+WPGD
Sbjct: 62 GTLVCGYHGLEMGCDGKTTGMPGQRVGGFPAIRSFPAIERYGFIWVWPGDATRADPAKLH 121
Query: 318 --PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P A P H + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 HLPWADDPAW-------AHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|359767566|ref|ZP_09271352.1| vanillate demethylase oxygenase subunit [Gordonia
polyisoprenivorans NBRC 16320]
gi|359314961|dbj|GAB24185.1| vanillate demethylase oxygenase subunit [Gordonia
polyisoprenivorans NBRC 16320]
Length = 375
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 48/269 (17%)
Query: 216 NFWFPVAF-----STDLKDDTM--EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 267
N W+ A+ ST + T+ +P ++R G P + + C HR PL +G +
Sbjct: 19 NAWYAAAWDHEVGSTQILARTIAGKPLALYRTDSGRPVALADACWHRLAPLSMGKRIGAE 78
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
I+CPYHG +Y+ G+C +MP+ + N + S P E+ +W+WPGD PT P
Sbjct: 79 EIRCPYHGLQYNAAGRCTRMPAQETINPSAMVASYPIEERHRYLWVWPGD--PTLADPST 136
Query: 326 LPPSGFEIHA------EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 379
+ P F++ + + +++ + L++DNL+DL H F H+S+ G S +F+
Sbjct: 137 I-PDMFQMDSPEWAGDGLTIDVRANYQLVVDNLMDLTHEEFVHSSSI--GQDELSESEFI 193
Query: 380 T------------------PASGLQGYWDPYP-----ID----MEFRPPCMVLSTIGISK 412
T P L+ D +P +D +EF+ P + +G++K
Sbjct: 194 TTHDENTVTVTRWMHNIDAPPFWLKNMRDKFPGFTGKVDRWQIIEFQAPGTIRIDVGVAK 253
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKK 441
G + R + ++ P ++
Sbjct: 254 AGTGAPEGDRSQGVNGFVMNTISPVDERR 282
>gi|254514746|ref|ZP_05126807.1| vanillate demethylase A [gamma proteobacterium NOR5-3]
gi|219676989|gb|EED33354.1| vanillate demethylase A [gamma proteobacterium NOR5-3]
Length = 346
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 145/336 (43%), Gaps = 49/336 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ A S +++ + + V+FR +G +++ C HR PL LG+V G
Sbjct: 9 KNCWYVAATSDEIEAKPLGRIVCGKSMVLFRAAEGQVAALEDFCPHRGAPLSLGTVANGL 68
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTAT--IPC 324
+ C YHG + DGKC M + + + I++ P E+ G IW+WPGD IP
Sbjct: 69 LVCGYHGMRMNADGKCAGMAGQSVEHFRKGIQTYPAIERHGYIWVWPGDAALANADLIPD 128
Query: 325 L----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK---GWSVP---- 373
L P F + + ++ LL+DNLLDL H + H S+ + + P
Sbjct: 129 LHWARSPDWAF---GGGMFHIRCDYRLLIDNLLDLTHETYVHASSIGQPEIEEAAPDTLR 185
Query: 374 -----SLVKFL--TPA-----SGLQG-YWDP-YPID----MEFRPPCMVLSTIGISKPGK 415
S+ +F+ PA L+G DP P+D F PP V+ +G++ G
Sbjct: 186 KDHHVSVSRFMEDIPAPPFWQDALKGNNLDPDLPVDRWQVCRFSPPGSVMIDVGVAHAGH 245
Query: 416 --LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
+E R+ + + + + P + + M+ +F + + + R ++
Sbjct: 246 GGIEAPVERRASGIV--VDLITPETETSCWYFWGMARNFN--VTDLALTDSI-RDSQLKI 300
Query: 474 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
EDL ++ QQ + + + D+ GV R
Sbjct: 301 FTEDLEMLESQQRNLEANPERRLMSLNIDRGGVEAR 336
>gi|158336046|ref|YP_001517220.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
gi|158306287|gb|ABW27904.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
Length = 458
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 154/343 (44%), Gaps = 55/343 (16%)
Query: 218 WFPVAFSTDLKDDTMEP-------WVIFRGKD-GIPGCVQNTCAHRACPLHLGSVNE--G 267
W+PVA DL P +VI++ KD G Q+ C HR PL G +++ G
Sbjct: 22 WYPVAPLEDLDPQRPTPITLLGQHFVIWQPKDSGQYLVFQDLCPHRLAPLSEGRIDDQTG 81
Query: 268 RIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPT-- 319
++ C YHGW++ G C +P S Q + + +P G++W+WP +P T
Sbjct: 82 QLMCSYHGWQFDQQGLCTHIPQAEAVTSQQSQLYCVTVIPTQAHSGLLWVWP--DPDTQD 139
Query: 320 --ATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---KG 369
AT P L P F +++ + +L + L++NL D +H PF H +
Sbjct: 140 VAATQPLPLSPLVDADQNF-VYSSFMRDLAYDWQTLVENLSDPSHVPFAHHGVQGNRNQA 198
Query: 370 WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 429
+P V TP + ++ F+PPC ++E Q +
Sbjct: 199 APIPMEVLTSTPELIEVQTTGKFSTNITFQPPC------------RMEYQFSIGDGKQAT 246
Query: 430 QLHVCLPSSRKKTRLLYRMSLDFAS-VLKHVP-FMQYLWRHFAEQVLNEDLRLVLGQQER 487
+ C+P + ++R++ + +FA+ ++K +P +++++ VL+ D+ L+ Q+++
Sbjct: 247 MVTYCIPIAPGRSRIVALFARNFATGLMKVIPRWVEHMLNR--NPVLDGDMILLRSQEKQ 304
Query: 488 M------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
+ N + LP D+L + YR W + G Q+P+
Sbjct: 305 LLQHTQTQNWQTTYKLPTSADRLVIEYRRWFEKYSHG--QIPW 345
>gi|170721226|ref|YP_001748914.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida W619]
gi|169759229|gb|ACA72545.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida W619]
Length = 355
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 124/314 (39%), Gaps = 48/314 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + + E V +RG + V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAEKPLGRQICGEKIVFYRGNENRVAAVEDFCPHRGAPLSLGFVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+P
Sbjct: 64 LVCGYHGLVMGCDGKTVAMPGQRVRGFPCNKAFAVVERHGFIWVWPGDQ--AQADPALIP 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------G 369
+ E + + ++ L++DNL+DL H + H S+ + G
Sbjct: 122 HLPWAARDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVSG 181
Query: 370 WSV-----------PSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
V P + +GL D P+D F PP VL +G++ G
Sbjct: 182 DEVVTARHMENIMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
+ + P S + M+ +FA+ H + R ++
Sbjct: 239 HGGYHAPAEHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQALTASIREGQGKIF 295
Query: 475 NEDLRLVLGQQERM 488
+EDL ++ QQ+ +
Sbjct: 296 SEDLEMLERQQQNL 309
>gi|398994825|ref|ZP_10697720.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398131654|gb|EJM20968.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 352
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 132/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + E V +RG +G V+N C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIASKPLGRQICGEKIVFYRGHEGRVAAVENFCPHRGAPLSLGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK +MP ++R K+ E+ G IW+WPG++ P L+
Sbjct: 64 LVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTYAVEERYGFIWVWPGEQ--GKADPDLIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHINCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ +QG +W D P+D F PP VL +G++
Sbjct: 177 TTVQGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFSPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK Q + P + + M+ +F H + R +
Sbjct: 237 AGKGGYNAEPQHKAASIVVDFITPETETSIWYFWGMARNFNP---HDEALTDTIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ +EDL ++ QQE + L + D GV+ R
Sbjct: 294 IFSEDLDMLEQQQENLLANPERNLLKLNIDAGGVQSR 330
>gi|116070900|ref|ZP_01468169.1| cell death suppressor protein Lls1-like [Synechococcus sp. BL107]
gi|116066305|gb|EAU72062.1| cell death suppressor protein Lls1-like [Synechococcus sp. BL107]
Length = 438
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 127/299 (42%), Gaps = 35/299 (11%)
Query: 218 WFPVAFSTDLKDDTMEP------------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
W+P+A+ DL D +P W + + + C HR PL G +N
Sbjct: 9 WWPIAYLQDL--DRSQPNRFTLLERDLVIWWDAKAEQASWRVFPDVCPHRLVPLSEGRIN 66
Query: 266 -EGRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGD--- 315
EG ++CPYHGW + +G C +P + R + SLP +G++++W G+
Sbjct: 67 DEGLLECPYHGWSFDGEGHCRSIPQAPDNTKPEARRSRCSSLPTAIGQGLLFVWTGEPDA 126
Query: 316 --EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 373
+ P +P L + +LP++ LL+N+LD++H PFTH T +
Sbjct: 127 ANQHPLPLVPALEEDPKSWTLQDTFRDLPMDAVTLLENVLDVSHVPFTHHKTVGNRNNAS 186
Query: 374 SLVKFLTPAS--GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 431
++ +T + G +W+ P R + T P + T + + +
Sbjct: 187 PVLATITREAEDGFDAFWEEGP-----RRGKLGSQTTSFHAPQLMWHDLTAKGFARILTV 241
Query: 432 HVCLPSSRKKTRLLYRMSLDFASVL-KHVPFMQYLW-RHFAEQVLNEDLRLVLGQQERM 488
+P R + RL R F S + K + ++ W +H + ED ++ L QER+
Sbjct: 242 VYAVPIRRGECRLFARFPFQFQSAVPKLLIGLRPRWLQHIGNHKVLEDDQVFLHWQERV 300
>gi|148557165|ref|YP_001264747.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148502355|gb|ABQ70609.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 351
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 113/282 (40%), Gaps = 60/282 (21%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ A+ ++ D + E V FRGKDG+ + + C HR PL LGSV +G
Sbjct: 10 LRNAWYMFAWGEEVADAPLGRTIAGEELVCFRGKDGLV-VLADRCPHRFVPLSLGSVADG 68
Query: 268 RIQCPYHGWEYSTDGKCEKMP-STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
++C YHG + +DG+C P ++S P E++ +IW+W GD P L
Sbjct: 69 VLECAYHGLRFGSDGRCMFNPLGDPPERAVVRSYPVVERDRVIWVWTGD-------PALA 121
Query: 327 PPSG---FEIHAEIV-------MELPIEHGLLLDNLLDLAHAPFTH-------------- 362
P G F A+ + ++ L +DNL DL H F H
Sbjct: 122 DPDGIADFSFLADPARATVTGYAHVRADYQLAIDNLSDLTHVQFVHRDYQASEAYHRLVD 181
Query: 363 -----------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 411
+ TF G P L FL P + + ++ + P + + ++
Sbjct: 182 DTWQDGDVVHRSITFPNGRPAPFLQSFLGPDKLID-----FTMETRWTLPSNIKLSATVT 236
Query: 412 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
+PG + Q H H+ P + Y S D+
Sbjct: 237 EPGAPD-----QYLIGNHSAHLVTPEADGSCHYFYAHSRDYG 273
>gi|119510320|ref|ZP_01629456.1| hypothetical protein N9414_16222 [Nodularia spumigena CCY9414]
gi|119465064|gb|EAW45965.1| hypothetical protein N9414_16222 [Nodularia spumigena CCY9414]
Length = 445
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 133/304 (43%), Gaps = 45/304 (14%)
Query: 250 NTCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKI---KS 299
+ C HR PL G V+E G + C YHGW++ + G C +P + +N KI S
Sbjct: 51 DQCPHRLAPLSEGRVDEKSGNLMCSYHGWQFDSQGICTHIPQAEKPEIVTKNEKIFCVIS 110
Query: 300 LPCFEQEGMIWIWPGDEPPTATIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNL 352
LP + ++W+WP A LP S G+ + + V +L + L++N+
Sbjct: 111 LPVRQANDLLWVWPDANSAEAAANTPLPLSPQVDADKGY-VWSSYVRDLEYDWETLVENV 169
Query: 353 LDLAHAPFTHTSTFAK-GWSVPSLVKFLTPASGLQGYWDP--YPIDMEFRPPCMVLSTIG 409
D +H PFTH K ++ P ++ + S L + + F PPC + I
Sbjct: 170 ADPSHVPFTHHGVQGKREYATPIPMEVVQSTSKLIEAMTSGRFKTTITFEPPCRLEYAIN 229
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 469
+ G+ + + C+P S K+R++ + +FA L + W H
Sbjct: 230 LGDSGE----------KKVGLVTYCIPVSPGKSRIVAQFPRNFAKTLHRL--TPRWWSHI 277
Query: 470 AEQ--VLNEDLRLVLGQQER-------MNNGANVWNLPVGYDKLGVRYRLWRDALEKGAK 520
+ VL+ D+ +VL QQE + + ++ LP D+L + +R W D G
Sbjct: 278 NTRNLVLDGDM-IVLHQQENFLQQRQAVESWKTIYKLPTSADRLVIEFRNWFDKYCFG-- 334
Query: 521 QLPF 524
QLP+
Sbjct: 335 QLPW 338
>gi|338530424|ref|YP_004663758.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
gi|337256520|gb|AEI62680.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
Length = 357
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 212 TRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
RL N WF + S +L D + P V+FRG+ G P + + C HR PL LG V
Sbjct: 14 VRLPNAWFILCASNELGDKPLARTLQGSPLVLFRGEGGKPAALVDRCPHRNVPLSLGRVK 73
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPPT 319
EG++QC YHGW + +G+C +P R + EQ+G +W++ PG EP T
Sbjct: 74 EGQLQCGYHGWRFDGEGQCRAIPGFLGEPGARARCATAHATREQDGFVWVYSTPGVEPTT 133
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
L + ++ P L+N LD+ H + H F
Sbjct: 134 EPYRFPLLEAREYTTVRRILRAPGSLHATLENTLDVPHTAYLHGGLF 180
>gi|428223044|ref|YP_007107214.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427996384|gb|AFY75079.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 331
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKNFW+ + S +L+ + VI+R + P + N C HR L G V +
Sbjct: 2 LKNFWYAICLSKELESKPIGITALGSDLVIYRNSNNEPIVMSNLCVHRGASLSSGWVKQD 61
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV------KIKSLPCFEQEGMIWIWPGD-----E 316
I CPYHGWEY +DG C K+PS + NV ++ + P E+ G+IW + GD
Sbjct: 62 CIVCPYHGWEYKSDGSCIKIPSYK-ENVPIPNKARVLTYPTQEKYGLIWAFIGDISESER 120
Query: 317 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
PP P ++ + + + + ++N +D+AHAPF H +F
Sbjct: 121 PPIPIFSEYDDPKYKKLWGDYSWD--VNYTRAVENGIDIAHAPFVHAGSFGN 170
>gi|374369367|ref|ZP_09627399.1| LysR family transcriptional regulator [Cupriavidus basilensis OR16]
gi|373099109|gb|EHP40198.1| LysR family transcriptional regulator [Cupriavidus basilensis OR16]
Length = 345
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 110/279 (39%), Gaps = 45/279 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
+KN W+ + ++ + M P V++R + G +++ C HR PL +G
Sbjct: 3 IKNTWYVAGWDKEIPAEGMFSRTIIGVPVVMYRKEHGGIVALEDRCCHRGAPLSVGRREG 62
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
I+C YHG ++ + GKC + P+ + K++ P EQ +WIW GD P P
Sbjct: 63 DCIRCMYHGLKFDSAGKCIEAPAQERIAPQAKVRKFPTVEQHRWVWIWMGD--PDKADPS 120
Query: 325 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG---------- 369
L+P + + H E + + + L+ DNLLD +H PF H +T
Sbjct: 121 LIPDTQWLDHPEWRSLDGYIHYDVNYLLICDNLLDFSHLPFVHPTTLGGSEDYAAVRPKV 180
Query: 370 -----------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 414
W++ P+ K + G W+ Y F P ++L G+S G
Sbjct: 181 ERIDGGVRITRWAINTEAPAFAKAVKAYPGKVDRWNIY----NFTIPAILLMDSGMSPTG 236
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
R A P + T + +FA
Sbjct: 237 TGAPAGVRVDAAEFRGCQAITPETENSTHYFFAHPHNFA 275
>gi|87198731|ref|YP_495988.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87134412|gb|ABD25154.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 341
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 25/172 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ +S ++ + +PWVI+R DG P + + C HR PL G +
Sbjct: 5 LRNAWYMACWSHEVPEGGFLARRLLDKPWVIWRKADGTPVIMADRCPHRFVPLSRGQRDG 64
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YHG +S+ G C P T L +++ LP E+ +W WPGD P
Sbjct: 65 DMMRCGYHGLAFSSSGGCVHNPFTDEALPLARVEVLPVVEKHTGLWFWPGDA--DRADPA 122
Query: 325 LLPPSGFEIHAEIVMELPIEHG---------LLLDNLLDLAHAPFTHTSTFA 367
L+P GF + +E P+ G L+ DNL+DL+HA F H +F
Sbjct: 123 LIPDFGF-----LDVERPLHRGHLKMDAGYELVTDNLMDLSHAEFIHRDSFG 169
>gi|443314552|ref|ZP_21044102.1| Rieske (2Fe-2S) domain-containing protein [Leptolyngbya sp. PCC
6406]
gi|442785849|gb|ELR95639.1| Rieske (2Fe-2S) domain-containing protein [Leptolyngbya sp. PCC
6406]
Length = 474
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 124/300 (41%), Gaps = 58/300 (19%)
Query: 250 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-------SLP 301
N C HR PL G +NE G+++CPYHGW +S G CE++P + SLP
Sbjct: 83 NQCPHRLAPLSEGRINEAGQLECPYHGWTFSGSGACEQIPQQSPETAAHRSPRACAHSLP 142
Query: 302 CFEQEGMIWIWPG--DEPPTATIPCL----LPPSGFEIHAEIVMELPIEHGLLLDNLLDL 355
++G+++++PG + P +P + P G+ + +LP + LL+N+LD
Sbjct: 143 TAVRQGLLFVYPGRVENAPQVPVPIIEAVEAEPEGW-VMLNTFRDLPYDALTLLENVLDA 201
Query: 356 AHAPFTHTSTFAKGW-SVPSLVKFLTPA-SGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
+H P+TH T K + P + + P G QG W P +
Sbjct: 202 SHIPYTHHKTVGKRENAAPMEMTVIDPGKQGFQGLWPEGP------------------RK 243
Query: 414 GKLEGQNTRQCATHL--HQLH-----------VCLPSSRKKTRLLYRMSLDFASVLKHVP 460
GKL Q+TR A L H L P + + RL R F+S L
Sbjct: 244 GKLGTQSTRFVAPGLMYHDLTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSPLPRF- 302
Query: 461 FMQYLWR---HFAEQVLNEDLRLVLGQQERM------NNGANVWNLPVGYDKLGVRYRLW 511
F+ + R H + ED ++ L QER A LP D+ +R W
Sbjct: 303 FIGVIPRWLSHIGNNGVLEDDQIFLHLQERFLAQAGDQPYAQTCYLPTQADRYVTAFRQW 362
>gi|288961898|ref|YP_003452208.1| vanillate monooxygenase [Azospirillum sp. B510]
gi|288914178|dbj|BAI75664.1| vanillate monooxygenase [Azospirillum sp. B510]
Length = 357
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 151/359 (42%), Gaps = 70/359 (19%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L N W+ A+ ++ D P V+FR G + + C HR PL LG+V
Sbjct: 4 LMNSWYVAAWDHEVTADRPLARTLLDRPVVLFRDAAGTARALFDRCPHRFAPLSLGTVQG 63
Query: 267 GRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGD--EPPTAT 321
++C YHG E+ G C + P T + K+++ P E+ +IWIW GD + A
Sbjct: 64 DSLRCAYHGLEFDGRGACTRNPHGNGTIPKAAKVEAFPLVERHSLIWIWMGDPAKADPAA 123
Query: 322 IP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--------- 369
IP CL P S + + + + + L DN++DL+H F H ST
Sbjct: 124 IPDFGCLDPES--QHVGKRYLRVNANYMLENDNIMDLSHIQFLHASTLGSDAVAQAVTEV 181
Query: 370 -------WSVPS-----LVKFLTPASGLQ-GYWDPYPIDMEFRPPCMVLSTIGISKPG-- 414
WS+ + + FL A G++ G ID+ + P ++ G G
Sbjct: 182 KEEGNTVWSLRTTHGEIMPDFLYQAMGIEPGIPVDRWIDVRWNAPANMVLLAGAVPSGRP 241
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
+ EG++T C H+ P + T Y S+ F + PF L AE+ +
Sbjct: 242 RAEGRDTPTC-------HLFTPETATTTH--YWFSISFPKAMG--PFGAQL----AEEQI 286
Query: 475 N--------EDLRLVLGQQERMNNGANVWNLP----VGYDKLGVRYRLWRDALEKGAKQ 521
+ EDL ++ QQ+ M + A W+L VG D GVR R D L +Q
Sbjct: 287 DGLSVPFRTEDLPMLEAQQKAMGD-AEFWSLKPVLLVG-DAAGVRARRVLDRLIAAEQQ 343
>gi|137442|sp|P12609.1|VANA_PSES9 RecName: Full=Vanillate O-demethylase oxygenase subunit; AltName:
Full=4-hydroxy-3-methoxybenzoate demethylase
gi|279997|pir||A43652 vanillate O-demethylase oxygenase (EC 1.14.-.-) Rieske iron-sulfur
component - Pseudomonas sp
gi|151636|gb|AAA26019.1| monoxygenase [Pseudomonas sp.]
Length = 329
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 39/254 (15%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
E VI+RG +++ C HR PL LGS+ +G++ C YHG DG+ MP+ ++
Sbjct: 5 ERMVIYRGAGQRVAALEDFCPHRGAPLSLGSIQDGKLVCGYHGLVMDCDGRTASMPAQRV 64
Query: 293 RNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFE-----IHAEIVMELPIEHG 346
+ I++ P E+ G IW+WPGD P L+P + + + + ++
Sbjct: 65 QAFPCIRAFPAQERHGFIWVWPGDA--ALADPALIPHLEWAENPAWAYGGGLYHIACDYR 122
Query: 347 LLLDNLLDLAHAPFTHTST------------------------FAKGWSVPSLVKFLTPA 382
L++DNL+DL H + H S+ F +G P +
Sbjct: 123 LMIDNLMDLTHETYVHASSIGQKEIDEAPVSTRVEGDRLITGRFMEGILAPPFWRAALRG 182
Query: 383 SGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSS 438
+GL D P+D F PP VL +G++ G+ C + P +
Sbjct: 183 NGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAGRGGYDAPADCKASSIVVDFITPET 239
Query: 439 RKKTRLLYRMSLDF 452
+ M+ F
Sbjct: 240 DTSIWYFWGMARSF 253
>gi|300313279|ref|YP_003777371.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Herbaspirillum seropedicae SmR1]
gi|300076064|gb|ADJ65463.1| vanillate O-demethylase oxygenase subunit oxidoreductase protein
[Herbaspirillum seropedicae SmR1]
Length = 349
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 101/239 (42%), Gaps = 43/239 (17%)
Query: 215 KNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
KN W+ VA + D D E V +RG G V++ C HR PL LG V EG
Sbjct: 4 KNAWY-VACTPDEIDSKPLGRQICGEKIVFYRGAGGKVAAVEDFCPHRGAPLSLGFVREG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--ATIPC 324
++ C YHG E DGK MP ++R I+S P E+ G IW+WPGD+ A I
Sbjct: 63 QLVCGYHGLEMGCDGKAISMPGQRVRGFPCIRSYPVEERYGFIWVWPGDKEQADPAQIHH 122
Query: 325 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 362
L E + + + ++ L++DNL+DL H + H
Sbjct: 123 LEWADNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRVEGE 182
Query: 363 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
TS F P + +GL D P+D F PP V+ +G++ G
Sbjct: 183 QVITSRFMDNIMPPPFWRMALRGNGLA---DDVPVDRWQICRFSPPSHVMIEVGVAHAG 238
>gi|167647208|ref|YP_001684871.1| vanillate monooxygenase [Caulobacter sp. K31]
gi|167349638|gb|ABZ72373.1| Vanillate monooxygenase [Caulobacter sp. K31]
Length = 347
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 137/317 (43%), Gaps = 45/317 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L++ W+ AF+ ++ D + P V++R G + + C HR PL +G++ +G
Sbjct: 6 LQDAWYQAAFAREIGDKPLARTLLDVPIVLYRSA-GKVVALHDRCPHRFAPLSMGALRDG 64
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+I C YHG + DG+C P L R +++++ P E+ ++WIW GD P L+
Sbjct: 65 QIICGYHGVGFGDDGRCVHNPHGALPRAMRVRAYPVVERHTVVWIWMGDT--RKADPALI 122
Query: 327 PPSGFEIH----AEIVMELPI--EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 380
P F A I +P + L++DNL+DL+HA + H ++ G +
Sbjct: 123 PDLSFIDETPETARICFYIPTAANYRLVVDNLMDLSHADYLHPTSLG-GVMTGAEASTEL 181
Query: 381 PASGLQGYWD--------------PYP------IDMEFRPPCMVLSTIGISKPGKLEGQN 420
A G+ W P P + +R P +++ ++ G+
Sbjct: 182 AADGVVNTWINRNCLAPARFHARVPPPQRADAWTEATWRAPAIMVIGTALAPAGE----- 236
Query: 421 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 480
R+ + LH P + T Y + L V + + L A +NED +
Sbjct: 237 PRRREDEIWALHSMTPETASTTH--YFVCGTRGERLDDVEYSERLRGMLANAFINEDKPM 294
Query: 481 VLGQQERMNNGANVWNL 497
+ QQ RM GA++ +L
Sbjct: 295 LEAQQARM-GGASLSSL 310
>gi|254412665|ref|ZP_05026438.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196180400|gb|EDX75391.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 443
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 133/299 (44%), Gaps = 44/299 (14%)
Query: 250 NTCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMPSTQL--------RNVKIKS 299
+ C HR PL G V+E G + C YHGW++++ G C +P + N+ +++
Sbjct: 51 DQCPHRLAPLSEGRVDEKTGNLVCSYHGWQFNSQGICTHIPQAETPQIVTNNQDNICVQT 110
Query: 300 LPCFEQEGMIWIWPGDEPP--TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNL 352
LPC ++ ++W+W P A P L P GF + + +V +L + L++N+
Sbjct: 111 LPCCQENDLLWVWLDANSPELAAATPRPLSPQVDASKGF-VWSSMVRDLDYDWQTLVENI 169
Query: 353 LDLAHAPFTHTSTFA-KGWSVPSLVKFL-TPASGLQG-YWDPYPIDMEFRPPCMVLSTIG 409
D +H PF H + + P ++ + + A+ ++G + M F PPC + I
Sbjct: 170 ADPSHVPFAHHGVQGNRDQAQPIAIEIVQSTANRIEGNTVGRFNTKMTFEPPCHLEYAIS 229
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 469
G+ G T C+P + K+R++ + +FA L + W H
Sbjct: 230 FGDKGQQVGLVT-----------YCIPVAPGKSRIVAQFPRNFAKSLSRL--TPRWWNHI 276
Query: 470 AEQ--VLNEDLRLVLGQQER-------MNNGANVWNLPVGYDKLGVRYRLWRDALEKGA 519
+ VL+ D+ ++L QQER + + + L D+ + +R W D +G
Sbjct: 277 TVRNLVLDGDM-ILLHQQERFLQQRQSVESWKTAYKLLTSADRFVIEFRKWFDKYCQGT 334
>gi|83746974|ref|ZP_00944020.1| Vanillate O-demethylase oxygenase subunit [Ralstonia solanacearum
UW551]
gi|207738780|ref|YP_002257173.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum IPO1609]
gi|83726394|gb|EAP73526.1| Vanillate O-demethylase oxygenase subunit [Ralstonia solanacearum
UW551]
gi|206592148|emb|CAQ59054.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum IPO1609]
Length = 342
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ ++ D + E V +RG +G +++ C HR PL LG V +G
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGERMVFYRGPEGKMAALEDFCPHRGAPLSLGFVRDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEP---PTATIP 323
+ C YHG DGKC MP ++ I+ P E+ G IW+WPGD P
Sbjct: 63 HLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPAQIHH 122
Query: 324 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
S + + + ++ L++DNL+DL H + H ++ +
Sbjct: 123 LEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQ 167
>gi|134292215|ref|YP_001115951.1| vanillate monooxygenase [Burkholderia vietnamiensis G4]
gi|134135372|gb|ABO56486.1| Vanillate monooxygenase [Burkholderia vietnamiensis G4]
Length = 359
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 100/242 (41%), Gaps = 47/242 (19%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LKN W+ VA + D D E V +R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVFYRAADGRVAALEDFCPHRGAPLSLGFVRD 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKTAAMPGQRVGGFPAIRSFPVVERYGFVWVWPGDA--SRADPAA 119
Query: 326 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 362
LP + H + + ++ L++DNL+DL H + H
Sbjct: 120 LPALTWADDPVWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAPPKTTS 179
Query: 363 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISK 412
TS F P + +GL D P+D F PP V+ +G++
Sbjct: 180 HGDEVVTSRFMHNVMPPPFWQMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVAH 236
Query: 413 PG 414
G
Sbjct: 237 AG 238
>gi|115391876|dbj|BAF33363.1| alpha-subunit oxygenase [Streptomyces sp. NL15-2K]
Length = 356
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 151/352 (42%), Gaps = 52/352 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SVN 265
+N W+ A+S ++ + + EP V +R + DG P + + C HR PL ++
Sbjct: 9 RNQWYVAAYSHEVGRELLGRTILGEPLVFYRTEEDGTPVVLHDRCVHRRFPLSEAPTRLD 68
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P P
Sbjct: 69 GDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVVEQDSLIWVWIGD--PALADP 126
Query: 324 CLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------- 362
+P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 127 QTIPRAKHLDSPGWTTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAETP 183
Query: 363 -TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
T+ +G + + + F ++G+QG + D+E+ PC+ L I+
Sbjct: 184 ITTEVDEGAGIVRVSRHMDDAACPPFYAKSTGIQGRITRWQ-DIEYHAPCLYLLHSRIAP 242
Query: 413 PGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 471
G + E + H + PS+ K + +S D+A+ V ++L +
Sbjct: 243 VGVVPEPDGSDPNGFHTEITYAITPSADGKVYDFWMVSRDWATDDAEV--TEFLRGNNHT 300
Query: 472 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY-RLWRDALEKGAKQL 522
V+ + L L Q+ L + D G+ R+ +E+GAK +
Sbjct: 301 VVMQDVDALNLLQKTLGTERTGYQELSINIDTGGLAARRILARLVEEGAKPM 352
>gi|332531588|ref|ZP_08407485.1| Rieske (2Fe-2S) protein [Hylemonella gracilis ATCC 19624]
gi|332038951|gb|EGI75380.1| Rieske (2Fe-2S) protein [Hylemonella gracilis ATCC 19624]
Length = 362
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 98/241 (40%), Gaps = 46/241 (19%)
Query: 215 KNFWFPVAFSTDLKDD-------TMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
KN W+ A S ++ D E +R G VQ+ C HR PL LG V +G
Sbjct: 9 KNTWYVAASSQEIGADKPLGRMVCGERIAFYRDAAGKMVAVQDFCPHRGAPLSLGHVCDG 68
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
++ C YHG DGK MP ++R IKS P E+ G +W+W G+ L
Sbjct: 69 QLTCGYHGLVMGCDGKTVSMPGQRVRGFPAIKSFPVAERYGFVWVWTGE--AALADEAKL 126
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH------------------- 362
P F H E + + ++ L++DNL+DL H + H
Sbjct: 127 PVLEFFDHPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHSTSIGQKEIDETPCKTTVE 186
Query: 363 -----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 413
TS F G P K A+GL D P+D F PP V+ +G++
Sbjct: 187 DDTVVTSRFMSGIEAPPFWKMALRANGLP---DDQPVDRWQICRFSPPSHVMIEVGVALQ 243
Query: 414 G 414
G
Sbjct: 244 G 244
>gi|398890089|ref|ZP_10643805.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM55]
gi|398188717|gb|EJM76013.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM55]
Length = 357
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ A +L +D E V++R DG P +++ C HR PL +G
Sbjct: 3 LRNAWYVAASEAELGEDLFPVTLLSESVVLYRKSDGTPVALEDACPHRKLPLSMGRRKGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIPC 324
I+C YHG + G C + P +Q + +++S P + G+IWIW GD E C
Sbjct: 63 DIECGYHGLTFDCSGSCVRAPGSQRIPQGARVRSYPLAVRYGLIWIWMGDLELADEAKIC 122
Query: 325 LLPPSG---FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
+P G + ++ M +P + + DNLLD AH + H S+F
Sbjct: 123 HVPEWGDPAWGLNRGDSMVIPCNYLYMTDNLLDPAHVAWVHQSSFGNA 170
>gi|390575016|ref|ZP_10255123.1| vanillate monooxygenase [Burkholderia terrae BS001]
gi|389932818|gb|EIM94839.1| vanillate monooxygenase [Burkholderia terrae BS001]
Length = 349
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 54/316 (17%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ A+S D+ D EP +++R DG P + + C HR PL +G
Sbjct: 4 LRNTWYAAAWSRDVGADLSTRELLGEPMLLYRKHDGAPVAMIDRCPHRFAPLSMGKRVGD 63
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
I+C YHG ++ G C K P R +++S P ++ G++WIW G+ P+
Sbjct: 64 GIECGYHGLQFDCSGACSKNPHGDGRIPPGARVRSFPAEDRHGLVWIWAGE--PSRADAS 121
Query: 325 LLPPSGFEIHAEIV-----MELPIEHGLLLDNLLDLA-----HAPFTHTSTFAK------ 368
L+P + + M + L++DNL+DL+ HAP+ H F +
Sbjct: 122 LIPDFSHLVSPRLKTVGDEMTQKAHYELVVDNLMDLSHVNYLHAPYQHVDDFLQAKHDVV 181
Query: 369 -------------GWSVP-SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 414
G P S FL YW +++ + P L G+ G
Sbjct: 182 QDGSALESRRTVAGTRAPQSFRPFLDDPDAPVDYW----LNIRWHAPGCCLLETGVVPVG 237
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMS----LDFASVLKHVPFMQYLWRHFA 470
+ + T H+ P T+ LY S LD Q + H
Sbjct: 238 RPREHGLVRIGT-----HIVTPIGAASTQYLYASSRNYRLDDPDADDETARWQQMGFHEQ 292
Query: 471 EQVLNEDLRLVLGQQE 486
++ + E ++ +G++E
Sbjct: 293 DKPMIEGVQTRMGERE 308
>gi|409407770|ref|ZP_11256221.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Herbaspirillum sp. GW103]
gi|386433521|gb|EIJ46347.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Herbaspirillum sp. GW103]
Length = 349
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 102/239 (42%), Gaps = 41/239 (17%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +++ + E V +RG +G V++ C HR PL LG V +G+
Sbjct: 4 KNAWYVACTPDEIESKPLGRQICGEKIVFYRGAEGKVAAVEDFCPHRGAPLSLGFVRDGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--ATIPCL 325
+ C YHG E DG MP ++R I+S P E+ G IW+WPG++ A I L
Sbjct: 64 LVCGYHGLEMGCDGHTRSMPGQRVRGFPCIRSFPVVERYGFIWVWPGEKEQADPAQIHHL 123
Query: 326 LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH---------------------- 362
E + + + ++ L++DNL+DL H + H
Sbjct: 124 EWAENPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRVEGER 183
Query: 363 --TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK 415
TS F + P + +GL D P+D F PP V+ +G++ G+
Sbjct: 184 VITSRFMENIMPPPFWRMALRGNGLA---DDVPVDRWQICRFSPPSHVMIEVGVAHAGQ 239
>gi|254249888|ref|ZP_04943208.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
gi|124876389|gb|EAY66379.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
Length = 359
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LKN W+ VA + D D E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRTADGQIAALEDFCPHRGAPLSLGFVRD 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKPAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGDA--SEADPAK 119
Query: 326 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
LP + H + + ++ L++DNL+DL H + H S+ +
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|56752068|ref|YP_172769.1| hypothetical protein syc2059_d [Synechococcus elongatus PCC 6301]
gi|56687027|dbj|BAD80249.1| unknown protein [Synechococcus elongatus PCC 6301]
Length = 233
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN+W+PVA + + D + E ++R G + + C HR L G V
Sbjct: 3 LKNYWYPVALAQKVGDRPLSVTLCGEAIALYRDSAGQIHALSDRCVHRGAALSGGWVEND 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIWIWPG-----DEP 317
+ CPYHGW+Y G C K+P+ + K+ E+ G++W++ G D P
Sbjct: 63 CLVCPYHGWQYDAQGHCRKIPANTEQQRIPFAAKVPHYDAIERYGLVWLFYGDLPEADRP 122
Query: 318 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
P +P P+ + E+ + + +NL+D AHAPFTH+ +F
Sbjct: 123 PLPPLPEYDDPAWRTVQGEVTYT--THYTRVTENLMDFAHAPFTHSGSFGAA 172
>gi|427718650|ref|YP_007066644.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
gi|427351086|gb|AFY33810.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
Length = 464
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 138/329 (41%), Gaps = 43/329 (13%)
Query: 218 WFPVAFSTDLKDDTMEPWVIFRGKDGIP---------GCVQNTCAHRACPLHLGSVNE-G 267
W+PV + DL+ P+ + G+D + + C HR PL G +N+ G
Sbjct: 32 WYPVYYLDDLEQSQPTPFTLL-GRDIVIWWDKQAKLWRAFDDQCPHRLAPLSEGRINQDG 90
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLPCFEQEGMIWIWPGDEPPTA 320
++CPYHGW +S G C+++P + + + SLP E++G+++++PG+ P A
Sbjct: 91 LLECPYHGWAFSGSGSCDRIPQQVVNGIAETSQRACVASLPTAERQGLLFVYPGN-PENA 149
Query: 321 T---IPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT-HTSTFAKGWSV 372
T IP + P P+ + + +LP + LL+N+LD +H PFT H S + +
Sbjct: 150 TKTQIPIVAPLEESPTEW-VCLNTFRDLPYDALTLLENVLDSSHLPFTHHRSVGNRANAA 208
Query: 373 PSLVKFLTP-ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 431
P ++ ++ G G W+ P R + PG + T + +
Sbjct: 209 PVELEVISSNKQGFTGIWEEGP-----RRGKLGRQETKFIAPGLMWHDLTSKQFGRTLTV 263
Query: 432 HVCLPSSRKKTRLLYRMSLDFASVLKHV--PFMQYLWRHFAEQVLNEDLRLVLGQQERM- 488
P + + RL R F + L + + H + + ED ++ L QER
Sbjct: 264 VYATPIRKGECRLFARFPFKFPNKLPGLLMKLTPRWYNHIGQNGILEDDQIFLHYQERYL 323
Query: 489 ------NNGANVWNLPVGYDKLGVRYRLW 511
N + LP D R W
Sbjct: 324 EAKGGSTNFTKAFYLPTKADSFVFELRQW 352
>gi|398993794|ref|ZP_10696729.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398133702|gb|EJM22887.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 352
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 125/313 (39%), Gaps = 46/313 (14%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
E V +RG +G V+N C HR PL LG V G + C YHG DGK +MP ++
Sbjct: 28 EKIVFYRGHEGRVAAVENFCPHRGAPLSLGYVENGNLVCGYHGLVMGCDGKTVEMPGQRV 87
Query: 293 RNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-----VMELPIEHG 346
R K+ E+ G IW+WPG++ P L+ + + E + + ++
Sbjct: 88 RGFPCNKTYAVEERYGFIWVWPGEQ--DKADPALIHHLEWAVSDEWAYGGGLFHINCDYR 145
Query: 347 LLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG----------------YW- 389
L++DNL+DL H + H S+ + + P + +QG +W
Sbjct: 146 LMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPLTTVQGDEVVTARHMENIMAPPFWR 200
Query: 390 ---------DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLP 436
D P+D F PP VL +G++ GK Q + P
Sbjct: 201 MALRGNNLADDVPVDRWQICRFSPPSHVLIEVGVAHAGKGGYNAEPQHKAASIVVDFITP 260
Query: 437 SSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWN 496
+ + M+ +F H + R ++ +EDL ++ QQ+ +
Sbjct: 261 ETETSIWYFWGMARNFNP---HDEALTDTIREGQGKIFSEDLDMLEQQQQNLLANPERNL 317
Query: 497 LPVGYDKLGVRYR 509
L + D GV+ R
Sbjct: 318 LKLNIDAGGVQSR 330
>gi|341614839|ref|ZP_08701708.1| vanillate monooxygenase [Citromicrobium sp. JLT1363]
Length = 329
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 130/319 (40%), Gaps = 48/319 (15%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
EP ++ R +DG + + C HR PL LG + CPYHG + T GKC + P +
Sbjct: 20 EPVLLMRKEDGTAVAMVDRCPHRYAPLSLGEREGDCVTCPYHGLTFDTSGKCVRNPFSDK 79
Query: 293 --RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGF--EIHAEIVMELPIE--HG 346
+++ P E++ ++W WPGD P A + S + HA I +P++ +
Sbjct: 80 IPAGASLRTFPVVERDHIVWFWPGD-PARADEDAIPDFSAIVRDGHAPITGLMPMDANYE 138
Query: 347 LLLDNLLDLAHAPFTHTSTFA--------------------KGWSVPSLVKFLTPASGLQ 386
DNL+DL+H F H +FA W +P + PA
Sbjct: 139 YGTDNLMDLSHIEFVHKGSFAGRGVIFAGEHEVKVEGEQLHSNWWMPGIP---APAHTF- 194
Query: 387 GYWDPYPI-----DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKK 441
G +DP I DM + P + +G G GQ R+ HQ H+ P +
Sbjct: 195 GIYDPEMITDHWLDMRWDAPASMYLQVGACPEG---GQ--REEGVIAHQAHILTPETETT 249
Query: 442 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWN---LP 498
+ + + A ++ + L Q E+ + ++ +GA W+ +
Sbjct: 250 SHYFWATTRHGAPSVEGDAMLAGL----MGQAFGEEDKPIIEAAYANTDGAGFWDRKPVS 305
Query: 499 VGYDKLGVRYRLWRDALEK 517
+G D G R R + L+K
Sbjct: 306 LGIDTGGTRARRMIEKLKK 324
>gi|398860648|ref|ZP_10616294.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM79]
gi|398234418|gb|EJN20293.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM79]
Length = 348
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 132/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + + E V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAEKPLGRQICGEKMVFYRGHEGKVAAVEDFCPHRGAPLSLGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 64 LVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--ALADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ + G +W D P+D F PP VL +G++
Sbjct: 177 TTVDGDEVVTARHMENIMPPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
G RQ + P + + M+ +F + R +
Sbjct: 237 AGHGGYHAPRQFKASSIVVDFITPQTETSIWYFWGMARNFNP---QDEALTASIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ +EDL ++ QQ+ + + L + D GV+ R
Sbjct: 294 IFSEDLEMLERQQQNLLSHPARNLLKLNIDAGGVQSR 330
>gi|115359078|ref|YP_776216.1| vanillate monooxygenase [Burkholderia ambifaria AMMD]
gi|115284366|gb|ABI89882.1| Vanillate monooxygenase [Burkholderia ambifaria AMMD]
Length = 366
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 138/355 (38%), Gaps = 74/355 (20%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ A+ +++K D + E ++FR G V N C HR PLHLG
Sbjct: 12 LRNAWYVAAWDSEVKADELFQRTLLNESVLLFRNDRGEVQAVSNRCPHRFAPLHLGKKLP 71
Query: 267 GRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDE--PPTAT 321
+QCPYHG E+ G+C + P + ++K+ P E+ +IWIW G+ ++
Sbjct: 72 NGVQCPYHGLEFDGSGQCTRNPHGGGVVPKAAQLKTYPVVEKYSLIWIWMGEASIADSSK 131
Query: 322 IP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 378
IP CL P A+ + + + L DN+LDL+H + H T ++
Sbjct: 132 IPDFSCLDPQ--LSHVAKRYLHVKANYVLETDNILDLSHIQYLHPGTLGSSSVADAITSV 189
Query: 379 L----TPASGLQGYWDPYP------------------IDMEFRPPCMVLSTIGISKPGKL 416
+ T S Q D P ID+ + P +L G GK
Sbjct: 190 VQEGNTVYSMRQTVGDIMPEFLYRQRRIPVGTPVDRWIDVRWDAPAHMLLDAGSVATGKP 249
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMS-------------LDFASVLKHVPFMQ 463
+ H+ P + T + +S DF S L H PF
Sbjct: 250 RSEGVSNKIAHIFS-----PETASTTHYWFAVSNPLSMGDDGMQRAEDFVSGLVH-PFQ- 302
Query: 464 YLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNL-PV--GYDKLGVRYRLWRDAL 515
NEDL ++ QQ M A+ W+L PV D VR R D L
Sbjct: 303 -----------NEDLPMLEAQQH-MIGEADFWSLKPVLLAGDAAAVRARRILDKL 345
>gi|329851632|ref|ZP_08266389.1| vanillate O-demethylase oxygenase subunit [Asticcacaulis
biprosthecum C19]
gi|328840478|gb|EGF90050.1| vanillate O-demethylase oxygenase subunit [Asticcacaulis
biprosthecum C19]
Length = 349
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 135/347 (38%), Gaps = 64/347 (18%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
NT N W+ A S ++ + E V +R +D +++ C HR PL LG V
Sbjct: 2 NTWPMNTWYVAARSDEVAAAPLGRTICGERMVFYRDQDHRAVALEDFCPHRGAPLSLGKV 61
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIP 323
++G++ C YHG DG+ MP ++R +K+ P E+ G IW+WPGD P P
Sbjct: 62 SDGKLVCGYHGLTMGCDGRAASMPGQRVRGFPPVKAYPAVERYGFIWVWPGD--PAQADP 119
Query: 324 CLLPPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTH---------------- 362
LP + H + + H L++DNL+DL H + H
Sbjct: 120 ATLPNLIWGDHPDWAYGGGLYHIKCNFRLMIDNLMDLTHETYIHADSIGQKEIDEAPVAT 179
Query: 363 --------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGI 410
T + P + +GL D P+D F PP V+ +G+
Sbjct: 180 RLEDDEAITERYMSDIQAPPFWQMALRENGLA---DDVPVDRWQICRFSPPSHVMIEVGV 236
Query: 411 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY------RMSLDFASVLKHVPFMQY 464
+ G G + V + +T Y R D A + +
Sbjct: 237 AHAG--HGGYNAPDGVKAASIVVDFITPESETSHWYFWGMARRFKPDDAGLTDRI----- 289
Query: 465 LWRHFAEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYR 509
R ++ +ED+ ++ QQ+ + N G N+ L + D GV R
Sbjct: 290 --REGQGKIFSEDMEMLERQQDNLTANPGRNLLKLNI--DAGGVHAR 332
>gi|307153793|ref|YP_003889177.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306984021|gb|ADN15902.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 355
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 204 SGPVQPYNTRLK------NFWFPVAFSTDLKD--DTMEPW----VIFRGKDGIPGCVQNT 251
S P+ P NT ++ N W+ VA S ++K ++ W V++R + GI +++
Sbjct: 5 SSPIIPENTDVRTCPINPNHWYAVARSCEVKRLPYSIILWHQAIVLYRDQKGIIHALEDR 64
Query: 252 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEG 307
C HR L GSV+ ++C YHGW ++ +GKC +P +L + +I+S P E +G
Sbjct: 65 CPHRQVKLSHGSVSGNDLECAYHGWRFNREGKCTFVPYLAEHQKLPSCQIRSYPVLELDG 124
Query: 308 MIWIWPGDEPPTATIPCLLPPSGF-------EIHAEIVMELPIEHGLLLDNLLDLAHAPF 360
IW++PGDE A L P G I V+ P + L++NL+D+ H
Sbjct: 125 FIWLFPGDE--QALKQKSLQPMGVPEWDHLNYIATVSVINCPGHYSFLIENLMDMYHG-- 180
Query: 361 THTSTFAKGWSVPSLVKFLTPASGLQGYWDP---YPID 395
H + W+ L + + Y++ Y ID
Sbjct: 181 -HLHNNYQAWAAAKLQNLSVEQNRIDAYYEAQSYYRID 217
>gi|339503621|ref|YP_004691041.1| vanillate O-demethylase oxygenase [Roseobacter litoralis Och 149]
gi|338757614|gb|AEI94078.1| putative vanillate O-demethylase oxygenase subunit [Roseobacter
litoralis Och 149]
Length = 356
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 109/267 (40%), Gaps = 38/267 (14%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
T ++N W+ A+ST++ D+ +P ++FR DG +++ C HR PL +G
Sbjct: 2 TTLVRNAWYVAAWSTEIDDELRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGKR 61
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
+QC YHG + TDGKC ++P Q R + + + P E+ G++WIW G EP A
Sbjct: 62 IGDTVQCGYHGLTFDTDGKCVRVPG-QDRIPLSACVDAYPIEERSGIVWIWMG-EPERAN 119
Query: 322 IPCLLPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPS 374
+ F +H + + + + +NL+D AH F H +T S VP
Sbjct: 120 PDDIFDLPQFHDDSWHMHHGGALHIESNYLNVAENLVDPAHVSFVHETTLGNSASENVPV 179
Query: 375 LVK-------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 415
V F G G D + R PC G + +
Sbjct: 180 HVSTEGEEIIAWRWIRDSEPIGFFKAFGGFTGNVDRWHY-YHLRLPCTAYIDFGSADATR 238
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKT 442
++ R T + LH P + T
Sbjct: 239 EIAEDDRDSGTRILALHFMTPVTETYT 265
>gi|300868863|ref|ZP_07113469.1| Iron-sulfur cluster-binding protein, Rieske family [Oscillatoria
sp. PCC 6506]
gi|300333080|emb|CBN58661.1| Iron-sulfur cluster-binding protein, Rieske family [Oscillatoria
sp. PCC 6506]
Length = 337
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 16/167 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
K FW+PV T+L D + +P V++ +G P V++ C HR L LG V G
Sbjct: 9 FKRFWYPVIPMTELSDRPVPFELLSQPIVLWLTAEGKPAAVEDKCCHRTAKLSLGKVVNG 68
Query: 268 RIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
I C YHGW ++ G+C +P T + K+K+ PC E+ G W+ G+ P IP
Sbjct: 69 NICCAYHGWTFNPCGECVHVPQISEGTISSSYKVKAYPCVERYGYAWVCLGE--PLIDIP 126
Query: 324 CL---LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
+ P +IH E +++N LD+AH F HT+TF
Sbjct: 127 NITEAFDPDYRQIH-EFYETWNCAGLRVMENELDMAHPTFVHTTTFG 172
>gi|78184439|ref|YP_376874.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9902]
gi|78168733|gb|ABB25830.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9902]
Length = 438
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 132/313 (42%), Gaps = 63/313 (20%)
Query: 218 WFPVAFSTDLKDDTMEP------------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
W+P+A+ DL D +P W + + + C HR PL G +N
Sbjct: 9 WWPIAYLQDL--DRRQPNRFTLLERDLVIWWDAQAEQHSWRVFPDVCPHRLVPLSEGRIN 66
Query: 266 -EGRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGD--- 315
EG ++CPYHGW + +G C +P + R + SLP +G++++W G+
Sbjct: 67 DEGLLECPYHGWSFDGEGHCRSIPQATDNTKPEARRSRCSSLPTATGQGLLFVWTGEPDS 126
Query: 316 --EPPTATIPCLLP-PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 372
+ P +P L P+ + + + +LP++ LL+N+LD++H PFTH T +
Sbjct: 127 ANQHPLPLVPALEEDPTSWTLQ-DTFRDLPMDAVTLLENVLDVSHVPFTHHKTVGNRNNA 185
Query: 373 PSLVKFLTPAS--GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL-- 428
++ +T + G +W+ P + GKL Q TR A L
Sbjct: 186 SPVLATITREAEDGFDAFWEEGP------------------RRGKLGSQTTRFQAPQLMW 227
Query: 429 HQLHV-----------CLPSSRKKTRLLYRMSLDFASVL-KHVPFMQYLW-RHFAEQVLN 475
H L +P R + RL R F S K + ++ W +H +
Sbjct: 228 HDLTAKGFARILTVVYAVPIRRGECRLFARFPFQFQSAAPKLLIGLRPRWLQHIGNHKVL 287
Query: 476 EDLRLVLGQQERM 488
ED ++ L QER+
Sbjct: 288 EDDQVFLHWQERV 300
>gi|310824238|ref|YP_003956596.1| rieske family iron-sulfur cluster-binding protein [Stigmatella
aurantiaca DW4/3-1]
gi|309397310|gb|ADO74769.1| Iron-sulfur cluster-binding protein, Rieske family [Stigmatella
aurantiaca DW4/3-1]
Length = 360
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 212 TRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
RL N WF + S +L + P V+FRG G P + + C HR PL LG V
Sbjct: 20 VRLPNCWFILCASGELGGKPLMRTLQGTPLVLFRGDGGRPAALLDRCPHRNVPLSLGRVV 79
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPPT 319
EG++QC YHGW + G+C +P T+ + S EQ+G +W++ PG EP +
Sbjct: 80 EGQLQCGYHGWRFDAAGECRAIPGLTGETRAKARCAASYATREQDGFVWVYSTPGVEPTS 139
Query: 320 A--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
P L P + V+ P L+N LD+ H F H F
Sbjct: 140 EPYRFPLLDAPGYSSVRR--VVRAPGSLHAALENTLDVPHTAFLHGGLF 186
>gi|124007563|ref|ZP_01692268.1| rieske 2Fe-2S domain protein, putative [Microscilla marina ATCC
23134]
gi|123987046|gb|EAY26802.1| rieske 2Fe-2S domain protein, putative [Microscilla marina ATCC
23134]
Length = 344
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTME-------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L + W VAF+ DLK P +++R V + CAH+ PL + +
Sbjct: 9 LADHWHAVAFAQDLKKKQSFKTKLYGIPLLLWRDTQAQVFAVADVCAHKRAPLAITCFKQ 68
Query: 267 GRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
+ CPYHGW+Y DG+ +PS+ N + +LP + G++W++ G P +
Sbjct: 69 NTLTCPYHGWQYKQDGRVCHIPSSPDIDLSKLNASLHTLPIRQANGLLWVYLGKGTPPSK 128
Query: 322 IPCLL--PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 374
+P L P G++ H ++ + LL++N +D H PF H +G P+
Sbjct: 129 LPLSLADPTKGWQ-HVQLKKQFDTSEELLIENFMDATHTPFIHRGII-RGHGAPT 181
>gi|158319648|ref|YP_001512155.1| Rieske (2Fe-2S) domain-containing protein [Alkaliphilus oremlandii
OhILAs]
gi|158139847|gb|ABW18159.1| Rieske (2Fe-2S) domain protein [Alkaliphilus oremlandii OhILAs]
Length = 324
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTME-------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
+ N W+ + S +K D + IFR G GCV + C HR L LG V +
Sbjct: 2 ISNQWYAILPSKKVKTDKIVGVKRMNLDLAIFRNSKGEIGCVVDQCTHRGAALSLGKVKD 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 320
IQCP+HG E++ GKC +P+ + +K P E+ G+I++W GDE
Sbjct: 62 DCIQCPFHGLEFNKIGKCMFIPANGKASTGDISRYNVKHYPVREENGIIYLWYGDE---E 118
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFAKG 369
I LP EI V +H ++N LD+ H PF H ST +G
Sbjct: 119 KITDDLPFFDKEIDDSFVFSELEDHWNSHYSRCIENQLDVVHLPFVHQSTIGRG 172
>gi|238023772|ref|YP_002908004.1| phenylpropionate dioxygenase [Burkholderia glumae BGR1]
gi|237878437|gb|ACR30769.1| Phenylpropionate dioxygenase [Burkholderia glumae BGR1]
Length = 374
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 19/162 (11%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+FW+P+A+S +LK +P V+FRG G +++ CAHR PLH G V+
Sbjct: 32 DFWYPLAWSRELKRGKTLGVHFAGDPIVLFRGDSGTVFALEDRCAHRQVPLHAGVVDGDA 91
Query: 269 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPG-----DEPPTA 320
++C YHGW Y GKC +P +L N ++S PC E +G+I+++ G DE P
Sbjct: 92 LRCGYHGWTYDCSGKCVDVPYLGKERLPN-GVRSYPCREVQGLIFVFTGDLALADEKPVP 150
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
+P + P E+ + + +NL+D+ H F H
Sbjct: 151 ALPTVSDPK--YKTRRFGREVKCHYSFMHENLMDMNHQ-FLH 189
>gi|340795645|ref|YP_004761108.1| vanillate monooxygenase [Corynebacterium variabile DSM 44702]
gi|340535555|gb|AEK38035.1| vanillate monooxygenase [Corynebacterium variabile DSM 44702]
Length = 382
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 216 NFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 267
N W+ A+ ++ + +P ++R KDG + + C HR PL G +
Sbjct: 30 NAWYVAAWDHEVTSKSPISRTIANKPLALYRTKDGRAVALADACWHRLAPLSKGKLIGRD 89
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
IQCPYHG +Y++ G+C MP+ + N + S P E+ IW+W GD PT P L
Sbjct: 90 GIQCPYHGLQYNSAGRCMSMPAQETLNPSAAVPSYPVVERYRYIWVWLGD--PTLADPTL 147
Query: 326 LPPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
+P H E + + + L+LDNL+DL H F H+S+ +
Sbjct: 148 VPDMHQMDHPEWTGDGLTIAAACNYQLILDNLMDLTHEEFVHSSSIGQ 195
>gi|427725393|ref|YP_007072670.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
gi|427357113|gb|AFY39836.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
Length = 439
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 145/331 (43%), Gaps = 51/331 (15%)
Query: 218 WFPVAFSTDL-----KDDTM--EPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 267
W+PVA DL K T+ +P VI++ + V + C HR PL G ++E
Sbjct: 10 WYPVALLEDLDPSAPKAITILGKPLVIWKPRAQQKYSVFLDKCPHRLAPLSEGRIDEKSD 69
Query: 268 RIQCPYHGWEYSTDGKCEKMP--------STQLRNVKIKSLPCFEQEGMIWIWPGDEPP- 318
R+ C YHGWE+ G C+++P + N + S P ++ ++W+W + P
Sbjct: 70 RLMCSYHGWEFDEAGSCQRIPQLGQPEILEKRRDNFCVVSFPVQTEQDLLWVWLDETTPD 129
Query: 319 -TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH-----TSTFA 367
A +P L P+ GF + + ++ + L++N++D +H PF H A
Sbjct: 130 LAAEMPLPLSPNISETKGF-VWSTYARDVDYDWTTLVENIVDPSHVPFAHHGLQGKREMA 188
Query: 368 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 427
K + + +T G + ++ F+PPC+V I GK G T
Sbjct: 189 KPLTFEIISSEMTCIEG--KVTSGFKTNITFKPPCLVEYEIPFPS-GKQVGLVT------ 239
Query: 428 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQER 487
C+P+S K RL+ +FA L + + R V++ D+ ++L +QE
Sbjct: 240 -----YCVPTSPGKARLIAFFVRNFAKQLGRLIPRWWEHRQTRNAVIDSDM-IILQRQEY 293
Query: 488 MNNGA-----NVWNLPVGYDKLGVRYRLWRD 513
N+ + + + +P D+ + +R W D
Sbjct: 294 FNHQSSESWKDAYKMPAEADRFVIEFRRWFD 324
>gi|170289317|ref|YP_001739555.1| Rieske (2Fe-2S) domain-containing protein [Thermotoga sp. RQ2]
gi|170176820|gb|ACB09872.1| Rieske (2Fe-2S) domain protein [Thermotoga sp. RQ2]
Length = 331
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 26/176 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 264
+KN W+ V S +LK + E +RG +G C+ + C HR + G V
Sbjct: 2 IKNQWYVVLSSRELKKGQLIGVTRFGEKLAFWRGSNGKVHCISDICCHRGASISHGKVLS 61
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT 319
N R+ CP+HG+EY + G+ +P+ N ++KS P +E IWIW GD P
Sbjct: 62 NGERVICPFHGFEYDSQGRVRTIPANGRNTPVPENFRVKSYPTYELADFIWIWYGDREPE 121
Query: 320 ATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
PP F+ ++ E + + ++N LD H PF H +T +G
Sbjct: 122 K------PPKYFDDITDELVYTEFKEVWNVHYSRAIENQLDPIHLPFVHYNTIGRG 171
>gi|325272616|ref|ZP_08138975.1| Rieske (2Fe-2S) iron-sulfur domain [Pseudomonas sp. TJI-51]
gi|324102258|gb|EGB99745.1| Rieske (2Fe-2S) iron-sulfur domain [Pseudomonas sp. TJI-51]
Length = 357
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 12/168 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ A T+L + E V++R DG P +++ C HR PL LG
Sbjct: 3 MRNAWYVAASETELGEQLFAVKLLNEAVVLYRKGDGTPVALEDACPHRKLPLSLGRRQGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIPC 324
I+C YHG + G C + P ++ + K++S P + G+IWIW GD E A+ C
Sbjct: 63 DIECGYHGLTFDCSGSCVRAPGSKHVPQGAKVRSYPLAVRYGLIWIWMGDAELADASKIC 122
Query: 325 LLPPSG---FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
+P G + ++ M +P + + DNLLD +H + H S+F
Sbjct: 123 HVPEWGDPAWGLNRGDSMVIPCNYLYMTDNLLDPSHVAWVHQSSFGSA 170
>gi|227015885|gb|ACP17982.1| putative vanillate-O-demethylase oxidoreductase a-subunit
[Pseudomonas nitroreducens]
Length = 354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 101/238 (42%), Gaps = 39/238 (16%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +RG +G V++ C HR PL LG V +G+
Sbjct: 4 KNAWYVACTPDEIADKPLGRQICNEKIVFYRGAEGRVAAVEDFCPHRGAPLSLGFVRDGK 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG E +GK MP +++ IKS E+ G IW+WPGD P L+
Sbjct: 64 LICGYHGLEMGCEGKTLAMPGQRVQGFPCIKSYAVEERYGFIWVWPGDR--ELADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK----- 377
+ + E + + ++ L++DNL+DL H + H S+ + + V
Sbjct: 122 HLEWADNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVSTRVEG 181
Query: 378 ----------------FLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK 415
F A G D P+D F PP VL +G++ GK
Sbjct: 182 DTVITSRYMDNVMAPPFWRAALRGNGLADDVPVDRWQICRFAPPSHVLIEVGVAHAGK 239
>gi|254414106|ref|ZP_05027874.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196179242|gb|EDX74238.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 357
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 24/175 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
LKNFW+ FS+ + T +P +V++R DG +++ C HR L LG V
Sbjct: 2 LKNFWYVCEFSSAV---TQKPKQILMLNQRFVLYRNSDGQVVALKDQCPHRGAALSLGWV 58
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGD---- 315
+G ++CPYHGW++ DGKC +P+ + ++ S E+ G++W++ GD
Sbjct: 59 EDGCLRCPYHGWKFQADGKCIDIPANAPEIPIPKKARVDSYLVQEKYGLVWLFYGDLPPE 118
Query: 316 -EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
PP +P P I A++ ++ + +++N LDLAH H ++ G
Sbjct: 119 KRPPIPYLPEFTDPKMRSIVADV--KVNNHYTRVIENALDLAHVYIVHGNSVGAG 171
>gi|302187358|ref|ZP_07264031.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. syringae 642]
Length = 354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 133/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R +D V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQDQQVVAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK ++ + P + + M+ +F + + R +
Sbjct: 237 AGKGGYHAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEE---LTASIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 294 IFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|409400349|ref|ZP_11250444.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Acidocella sp. MX-AZ02]
gi|409130634|gb|EKN00384.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Acidocella sp. MX-AZ02]
Length = 342
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ A +L + + E V +RG G V++ C HR PL LG V +G
Sbjct: 3 LKNAWYVAAMPDELAETPLGRTICGEKMVFYRGAGGKVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPT--ATIPC 324
++ C YHG +GK +MP ++ IKS E+ G IW+WPGD+ ATI
Sbjct: 63 KLVCGYHGLAMGCEGKALEMPGQRVNGFPAIKSYAVEERYGFIWVWPGDKAKADPATIHH 122
Query: 325 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L E + + + ++ L++DNL+DL H + H + +
Sbjct: 123 LEWAVNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHAGSIGQ 167
>gi|90415583|ref|ZP_01223517.1| Rieske (2Fe-2S) region protein [gamma proteobacterium HTCC2207]
gi|90332906|gb|EAS48076.1| Rieske (2Fe-2S) region protein [marine gamma proteobacterium
HTCC2207]
Length = 354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
+ W+ A S ++ D + EP V+FR +DG G +++ C HRA PL LG+V+E +
Sbjct: 21 DMWYVAALSAEVSDKPLARTLLNEPVVLFRTQDGQIGALEDRCCHRALPLSLGTVDESGL 80
Query: 270 QCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+C YHG ++ G C ++P + K+ + E+ +IWIW G E + P P
Sbjct: 81 RCGYHGLLFNCAGACIEIPGQEKIPSKAKVTAYHAIEKGPLIWIWFGSELDSE--PSCEP 138
Query: 328 PSGFEIHAEI-------VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P + +H + V + L+ DNLLDL+H + H +T
Sbjct: 139 PE-YSVHTDKRYLFDGDVYHYEAPYQLIHDNLLDLSHLGYVHANTIG 184
>gi|297203738|ref|ZP_06921135.1| oxidoreductase alpha subunit [Streptomyces sviceus ATCC 29083]
gi|197711787|gb|EDY55821.1| oxidoreductase alpha subunit [Streptomyces sviceus ATCC 29083]
Length = 357
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 129/290 (44%), Gaps = 49/290 (16%)
Query: 209 PYNTRL-KNFWFPVAFSTDLKDDTM-------EPWVIFRGK-DGIPGCVQNTCAHRACPL 259
P+ T +N W+ A+S ++ + + EP V +R + DG P + + C HR PL
Sbjct: 2 PHTTAFARNQWYVAAYSHEVGREELLGRTILGEPLVFYRTEEDGTPVALADRCVHRRFPL 61
Query: 260 HL--GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD 315
H ++ RI C YHG+ Y T G C +P + R ++ S P E + ++W+W GD
Sbjct: 62 HEKPSRLDGDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVVELDSLVWVWIGD 121
Query: 316 EPPTA---TIP---CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------ 362
P A TIP L P + ME + ++GLL+DNLLDL+H + H
Sbjct: 122 -PALADADTIPRARHLDSPGWVTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGT 177
Query: 363 --------TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL 405
T+ +G + + + F ++G++G + D+E+ PC+ L
Sbjct: 178 PEVAETPITTEVDEGAGIVRVSRHMDDAACPPFYAKSTGIEGRITRWQ-DIEYHAPCLYL 236
Query: 406 STIGISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 454
I+ G L E + H + PSS + +S D+A+
Sbjct: 237 LHSRIAPVGVLPETDGSDPNGFHTEITYAITPSSDGHVYDFWMVSRDWAT 286
>gi|297170934|gb|ADI21951.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases, large terminal subunit [uncultured nuHF2
cluster bacterium HF0130_29D04]
Length = 329
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 24/172 (13%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ A S ++ + E V FR G +++ CAHR PL LG V
Sbjct: 6 LQNQWYAAALSKEVPEKEPFARKICGEDIVFFRKPKGEVSALEDRCAHRHAPLSLGLVEN 65
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE--PPTATI 322
G I+C YHG + +G+C ++P + +IKS P EQ+G +WIW G +TI
Sbjct: 66 GSIRCQYHGMLFDGNGQCVEVPGQEKIPSGARIKSYPVAEQDGWVWIWIGKNGSQSVSTI 125
Query: 323 PCL-----LPPSGFE--IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P +GF+ H + + L +DNLLDL+H FTH S+
Sbjct: 126 PSFPYFDTAKWAGFQKYFHVQGAAQ------LFVDNLLDLSHLAFTHKSSIG 171
>gi|395499683|ref|ZP_10431262.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. PAMC
25886]
Length = 333
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 216 NFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+PVA S L++ + P V+FR + G + + C HR PL G V +G+I
Sbjct: 5 NAWWPVALSHQLRNAPLACQLLGLPLVLFRDEGGRAAVLPDRCPHRFAPLSAGKVRDGQI 64
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRNVK---IKSLPCFEQEGMIWIWPGDE----PPTATI 322
+CPYHGW ++ DG+C ++P T+ + S+ E G++W+ PG E PP A
Sbjct: 65 ECPYHGWRFAADGRCTRVPGTEQAACNKPLLDSVQSCEAHGLVWVSPGPERPQTPPVAPA 124
Query: 323 PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 364
P F I ++ L +N LD H F H
Sbjct: 125 PQQQNLDTFWITDQVQCSLQDA----AENFLDGFHTHFVHAG 162
>gi|395652321|ref|ZP_10440171.1| oxidoreductase subunit alpha [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 237
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + E V +RG +G V++ C HR PL LG V GR
Sbjct: 4 KNTWYVACTPDEIAQKPLGRQICGEKMVFYRGHEGAVVAVEDFCPHRGAPLSLGYVENGR 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ + P L+
Sbjct: 64 LVCGYHGLVMGGDGKTVDMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--SLADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
+ + E + ++ ++ L++DNL+DL H + H S+ +
Sbjct: 122 HLEWAVSDEWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|389577642|ref|ZP_10167670.1| ring-hydroxylating dioxygenase, large terminal subunit [Eubacterium
cellulosolvens 6]
gi|389313127|gb|EIM58060.1| ring-hydroxylating dioxygenase, large terminal subunit [Eubacterium
cellulosolvens 6]
Length = 323
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
+ N W+ + S LK + E VIFR +G GCV + CAHR L G + +
Sbjct: 2 INNQWYAILSSHKLKRGKVVGVRRFGENLVIFRTDNGQIGCVNSLCAHRKASLAKGCIQD 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMP-----STQ-LRNVKIKSLPCFEQEGMIWIWPGDEPPTA 320
++CP+HG EY GKC +P STQ ++K+ P E G+I++W GD+ P
Sbjct: 62 DHVKCPFHGIEYDVSGKCVYVPSEGRASTQDYTRFRMKNYPTKEIGGIIFVWYGDKEPEG 121
Query: 321 --TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
+ ++ S + + I +++ +++N LD++H F H +T +G
Sbjct: 122 EPDVFDVITDSSYA-YDHIEDTWNVDYSRVIENQLDVSHLAFVHHNTIGRG 171
>gi|358460096|ref|ZP_09170285.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357076603|gb|EHI86073.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 371
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L++ W PVA ST+L D + EPWV+ R DG ++ C HR PL G V+
Sbjct: 12 LRHGWHPVALSTELGDQPLGVRLLGEPWVLAR-LDGAVTAFEDRCPHRLAPLSAGRVDGE 70
Query: 268 RIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
+ CPYHGW ++ G C +P+ R + E+ G++W+ P DEP +
Sbjct: 71 TLVCPYHGWRFAAGGDCVAVPALGPGVPAPRRARATAAWGVTERYGLVWVAP-DEPFSEI 129
Query: 322 IPCLLPPSGFEIHAEIVME---LPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
+ LP + I +E GLL DN LD AH PF H T G
Sbjct: 130 ME--LPEDADDAFDSISLEPSRTTAAAGLLADNFLDTAHFPFVHAGTIGAG 178
>gi|397588210|gb|EJK54188.1| hypothetical protein THAOC_26247 [Thalassiosira oceanica]
Length = 855
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 153/349 (43%), Gaps = 53/349 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN- 265
+ W+ VA+ +K+ + EP V++R DG C ++ C HR+ PL +G +N
Sbjct: 392 FNDHWYAVAYPWQVKEGEVFATRLWGEPLVLYRDSDGNLVCSKDVCPHRSAPLSMGKIND 451
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-----------IKSLPCFEQEGMIWIWPG 314
EG+++C YHGW + DG E +P TQ+R+ +K+ E EG+IWIW G
Sbjct: 452 EGQLECMYHGWGFGKDGNIESIP-TQIRDGGSSKRSPPKRSCLKTYCVEEHEGLIWIWRG 510
Query: 315 D--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 372
+ E + +P S + I + V++ ++ +++N LD H + H + S+
Sbjct: 511 ELLEADASKLPKTRDVSTYPI--DTVLDYNVDWQYIVENNLDSPHLFWLHNGSVPPVRSL 568
Query: 373 PSLVKFLTPASGLQGYWDP-----YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 427
+ V+ LQ + D Y +P + + I + G ++
Sbjct: 569 -NFVREKVNQVKLQYFRDDSGHGHYGQTAGGKPKIVRFDSPNIVRHGG--------TSSF 619
Query: 428 LHQLHVCLPSSRKKTRLLYRMSLDFASVLK---HVPFMQY-------LWRHFAEQVLNED 477
+ H+ +P + +TR+L R +L +L +P + LW + + ED
Sbjct: 620 SEEFHI-VPIAPGRTRVLLRQNLPKGPILTTALSIPGADFVLEKLVNLWNY---HIALED 675
Query: 478 LRLVLGQQERMNN-GANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFM 525
++ GQ +++ GAN ++ D L + W++ LPF
Sbjct: 676 YSVMQGQAHNVDDLGANHLSVGDLGDDLIKHFYKWKEHAVANDGALPFF 724
>gi|282897695|ref|ZP_06305694.1| Rieske (2Fe-2S) region protein [Raphidiopsis brookii D9]
gi|281197374|gb|EFA72271.1| Rieske (2Fe-2S) region protein [Raphidiopsis brookii D9]
Length = 360
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 23/193 (11%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
N L+N W+ S+ LK M EP ++ R K+G +++ C HRA PL G
Sbjct: 12 NILLRNLWYYALPSSQLKTGKMVSRVLLREPILLTRDKNGQVFAIEDICPHRAVPLSCGR 71
Query: 264 VNEGRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDE- 316
+ +++C YHGW + + GKC ++P S L +KS P +E +G IWI+ D+
Sbjct: 72 FDGEQVECCYHGWRFDSQGKCTQIPSLLPEQSIDLSKFNVKSYPVYETQGNIWIYMYDKE 131
Query: 317 -----PPTATIPCLLPPSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAKG 369
IP + S E VM+ P I+H + L+D AH+P+ H + +
Sbjct: 132 GASINAEIGNIPQIPGFSNIEPDLVEVMKFPCFIDHA--VTGLMDPAHSPYVHQVWWWRS 189
Query: 370 WSVPSLVKFLTPA 382
+ VK P+
Sbjct: 190 GKLHEEVKQFDPS 202
>gi|389684127|ref|ZP_10175458.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas
chlororaphis O6]
gi|388552466|gb|EIM15728.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas
chlororaphis O6]
Length = 353
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 39/238 (16%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEKMVFYRGLEGRVAAVEDFCPHRGAPLSLGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 64 LVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--ALADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------G 369
+ + E + + ++ L++DNL+DL H + H S+ + G
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPTTRVEG 181
Query: 370 WSVPS---LVKFLTP-----ASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK 415
V + + + P A G D P+D F PP VL +G++ G+
Sbjct: 182 NEVVTARHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAGQ 239
>gi|113953594|ref|YP_731035.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
CC9311]
gi|113880945|gb|ABI45903.1| cell death suppressor protein Lls1 homolog [Synechococcus sp.
CC9311]
Length = 440
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 130/307 (42%), Gaps = 49/307 (15%)
Query: 218 WFPVAFSTDLKDDTMEPWVIFRGKDGI-----PG----CVQNTCAHRACPLHLGSVNE-G 267
W+PVA+ DL D T +D + PG ++ C HR PL G +NE G
Sbjct: 9 WWPVAYLRDL-DRTRPQRFTLLEQDLVLWWDAPGQCWRAFEDVCPHRLVPLSEGRINEAG 67
Query: 268 RIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPG-----DE 316
+++CPYHGW + G C +P ++ + S P +G++++W G D
Sbjct: 68 QLECPYHGWSFDGQGTCRAIPQMGERARSESKRTGCGSFPTATGQGLLFVWSGTASAADS 127
Query: 317 PPTATIPCLLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 372
+P L IV +LP++ LL+N+LD++H PFTH T K +
Sbjct: 128 AALPLVPVLQEQGDGWADGWIVQDTFRDLPMDALTLLENVLDVSHVPFTHHRTVGKRENA 187
Query: 373 PSLVKFLT--PASGLQGYWDPYP-------IDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 423
+ +T + G + +W P D FR P ++ + T +
Sbjct: 188 SPVEAVITREDSQGFEAFWQEGPRRGKLGSQDTHFRAPQLMWHDL------------TAK 235
Query: 424 CATHLHQLHVCLPSSRKKTRLLYRMSLDF-ASVLKHVPFMQYLW-RHFAEQVLNEDLRLV 481
+ + +P SR K RL R F A+ + + ++ W +H + ED ++
Sbjct: 236 GFARILTVVYAVPISRGKCRLFARFPFQFKAAAPRLLVGLRPRWLQHIGNHKVLEDDQVF 295
Query: 482 LGQQERM 488
L QER+
Sbjct: 296 LHWQERV 302
>gi|427720788|ref|YP_007068782.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
gi|427353224|gb|AFY35948.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
Length = 443
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 140/345 (40%), Gaps = 66/345 (19%)
Query: 218 WFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 267
W+PV+ DL P VI++ K V + C HR PL G +++ G
Sbjct: 11 WYPVSPIEDLDSQRPNPVTVLGLRLVIWKPKSSETYRVFLDQCPHRLAPLSEGRIDDKTG 70
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEP-- 317
+ C YHGW++ G C +P + +N+ +LP ++ ++W+WP +
Sbjct: 71 NLMCTYHGWQFDAQGICTHIPQAENPQLVTKNQQNLCAVTLPTRQENDLLWVWPDAKSVE 130
Query: 318 PTATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS-------- 364
A P L P GF + V +L + L++N+ D +H PF H
Sbjct: 131 QAAITPLPLSPQIDANKGF-VWNSFVRDLEYDWQTLVENVADPSHVPFAHHGVQGNRDKA 189
Query: 365 ---TFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
+ + S SL++ T + + + F PPC + I I K G T
Sbjct: 190 RPISLSIEESTASLIEVSTAGN--------FSTKITFEPPCRLEYAINIGNSDKKMGLVT 241
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLR 479
C+P S K+R++ + +FA L F+ W H + VL+ D+
Sbjct: 242 -----------YCIPVSPGKSRIVAQFPRNFAQTLHR--FIPRWWDHITNRNLVLDGDMI 288
Query: 480 LV------LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
L+ L Q++ + + LP D+L + +R W D +G
Sbjct: 289 LLSQQEYFLQQRQLTESWKTAYKLPTSADRLVIEFRNWFDKYCQG 333
>gi|428777418|ref|YP_007169205.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Halothece
sp. PCC 7418]
gi|428691697|gb|AFZ44991.1| Rieske (2Fe-2S) iron-sulfur domain protein [Halothece sp. PCC 7418]
Length = 354
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 21/177 (11%)
Query: 216 NFWFPVAFSTDLKDDTMEP---W----VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+PVA++ DLK +T++ W IFR + G + + C H+ H G+VN
Sbjct: 24 NHWYPVAWAHDLKRETVQQVTVWYQNIAIFRDEAGDVHALADACPHKGVAFHKGTVNGNH 83
Query: 269 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPG-----DEPPT 319
+ CPYHGWE++++GKC +P +L +S P E+ G+IW++PG +E P
Sbjct: 84 LVCPYHGWEFNSEGKCVHIPYFSEEQKLPRACARSYPTQEKYGLIWVFPGEAELAEEKPI 143
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLV 376
+P P + + + +N +D+ H + H +GW P L+
Sbjct: 144 LNLPEFENPKWLRV--PVTARFNAHFSMCNENTMDVFHG-YLHQDL--QGWFNPELI 195
>gi|428219240|ref|YP_007103705.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Pseudanabaena sp. PCC 7367]
gi|427991022|gb|AFY71277.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena sp. PCC
7367]
Length = 360
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
KNFW+ V FS + + + + ++R G + N C HR L G+VN+
Sbjct: 2 FKNFWYAVEFSDRISETPCLVKAFNQEFAVYRTAAGKVLAMDNRCVHRGAALANGTVNDN 61
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGD-----EP 317
+ CPYHGW++ + GKC +P+ K+ + E+ G IW++ GD P
Sbjct: 62 CLTCPYHGWKFDSSGKCVDIPANPAGMSIPNRAKVSTYDVVEKYGWIWLFWGDLPIDERP 121
Query: 318 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P +P P I + E +++N LD+AHAPF H F
Sbjct: 122 PIPELPHFYNPDLKAISGDFNWSANYER--IVENGLDIAHAPFVHAGAFGN 170
>gi|323135827|ref|ZP_08070910.1| Rieske (2Fe-2S) iron-sulfur domain [Methylocystis sp. ATCC 49242]
gi|322398918|gb|EFY01437.1| Rieske (2Fe-2S) iron-sulfur domain [Methylocystis sp. ATCC 49242]
Length = 328
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 121/299 (40%), Gaps = 57/299 (19%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMEPW-------VIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
+ N W V + DLK P V FR G + + C HR L LG V
Sbjct: 3 SSFANVWTIVGLARDLKPGRPLPMRVAGERIVFFRDASGNAAALLDRCPHRGVALSLGRV 62
Query: 265 NEGRIQCPYHGWEYSTDG-KCEK--MPSTQLRNVKIKSLPCFEQEGMIWIW----PGDEP 317
+ G I+CP+HGW + G C P + N+ SLP E G++W++ P DEP
Sbjct: 63 DRGVIECPFHGWRFDGSGANCGAPFNPDAKRENLGAISLPARESGGLLWLYTGFSPEDEP 122
Query: 318 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 377
+ G + A+ V+ +++N+LD+ H PF H T G + LV+
Sbjct: 123 ALSDT---FAAPGLALCAQSVL-WRAHWTRVMENMLDMPHLPFVHRRTIGAG--LRELVE 176
Query: 378 FLTPASGLQGYWD---------------PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR 422
+ YW+ P P +E+R P ++ + I PGKL
Sbjct: 177 -----KRMDVYWEDRPYGARVTNAVDSVPRPGALEYRFPNVM--ELFIDPPGKL------ 223
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
+ C+P + TRL+ DFA P + ++R ++ NED +V
Sbjct: 224 -----FRLMVACVPEDEETTRLILLTMRDFA----RSPLLHPVFRWMNRRIANEDQTIV 273
>gi|399010468|ref|ZP_10712841.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM17]
gi|398107191|gb|EJL97198.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM17]
Length = 351
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 128/335 (38%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +RG +G +++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEKMVFYRGLEGRVAALEDFCPHRGAPLSLGYVESGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 64 LVCGYHGLVMGCDGKTVAMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--ALADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFA--------------- 367
+ + E + + ++ L++DNL+DL H + H S+
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPTTRVEG 181
Query: 368 ---------KGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
+ P + +GL D P+D F PP VL +G++ G
Sbjct: 182 DEVVTARHMQNIMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
+ Q + P S + M+ +F + R ++
Sbjct: 239 QGGYNAPAQSKASSIVVDFITPQSDTSIWYFWGMARNFN---PQDEALTASIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+EDL ++ QQ+ + L + D GV+ R
Sbjct: 296 SEDLEMLERQQQNLLAHPTRNLLKLNIDAGGVQSR 330
>gi|398868017|ref|ZP_10623445.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM78]
gi|398234911|gb|EJN20768.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM78]
Length = 352
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 132/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + E V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIASKPLGRQICGEKIVFYRGHEGRVAAVEDFCPHRGAPLSLGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK +MP ++R K+ E+ G IW+WPG++ P L+
Sbjct: 64 LVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTYAVEERYGFIWVWPGEQDKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHINCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFSPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK Q + P + + M+ +F H + R +
Sbjct: 237 AGKGGYNAEPQHKAASIVVDFITPETETSIWYFWGMARNFNP---HDEALTATIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 294 IFSEDLDMLEQQQKNLLANPERNLLKLNIDAGGVQSR 330
>gi|187918962|ref|YP_001887993.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187717400|gb|ACD18623.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 352
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 136/345 (39%), Gaps = 46/345 (13%)
Query: 201 LNVS-GPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCA 253
+NV G V T ++ +W VA+S LKD + E VI R +G + C
Sbjct: 9 INVEKGEVPELFTAMRKYWHAVAYSGQLKDKPLGVTLLGESVVIAR-LNGEVRAMHGRCP 67
Query: 254 HRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMI 309
H+ L LG V +G+I+CPYHGW++ GKC ++P+ T+ NV I E G+I
Sbjct: 68 HKGTALALGEVVDGKIECPYHGWQFDGGGKCVRVPAREELTEGMNVSIDCYYAAEHVGII 127
Query: 310 WIWPGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
W+ E P A +P L F I E L+N +D AH P+ H T
Sbjct: 128 WV--ALEKPIAPLPDFPELSDPSFRIQQGPSYEWATSAPRRLENFVDFAHFPYVHDGTIG 185
Query: 368 ----------KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPP------CMVLSTIGIS 411
K W +++F GY P P +F P ++ I
Sbjct: 186 ARDNPAVETVKVWREGHVLRF-----DRSGYLPPNPDLYKFLFPVRETDRVTPVNAYHIF 240
Query: 412 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 471
P + P + TR+ + + DF + P + +
Sbjct: 241 LPATVHASFRMPNDKRYVLFMSASPVTEDLTRIFWWQARDF----RTEPMEDRFFIELED 296
Query: 472 QVLNEDLRLVLGQQER--MNNGANVWN--LPV-GYDKLGVRYRLW 511
+L ED ++ Q+ + NG N + PV G D + + YR W
Sbjct: 297 TILGEDKAIIESQRPKWFSFNGENRDDRETPVRGSDIVSIEYRRW 341
>gi|256394032|ref|YP_003115596.1| Vanillate monooxygenase [Catenulispora acidiphila DSM 44928]
gi|256360258|gb|ACU73755.1| Vanillate monooxygenase [Catenulispora acidiphila DSM 44928]
Length = 336
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 141/333 (42%), Gaps = 50/333 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+N W+ A+++++ + EP V +R G+DG + + C HR PL ++
Sbjct: 7 RNQWYVAAYASEVGRTFLARTILGEPIVFYRTGQDGRAVALADRCVHRRYPLSESRLDGD 66
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
I C YHG+ Y T G C +P Q R ++ S P E + +W+W GD P L
Sbjct: 67 TIVCGYHGFTYDTSGTCVFVPGQQRIPRTARVASYPVAELDSFVWVWIGD--PELADDKL 124
Query: 326 LPPSGFEIHAEIV----ME-LPIEHGLLLDNLLDLAHAPFTH-----------TSTFAKG 369
+P + E V ME + ++GLL+DNLLDL+H + H T
Sbjct: 125 IPRAPHMADPEFVTVSGMEPIDCDYGLLVDNLLDLSHETYLHGGYIGTPEVADTPITTDA 184
Query: 370 WSVPSLVK------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE 417
+V+ F ++G+QG D+E+ PC+ L I+ G+
Sbjct: 185 DEQAGIVRVARHMVDAACPPFYAKSTGIQGRITRLQ-DIEYFAPCLYLLHSRITPAGE-- 241
Query: 418 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNED 477
QN + PS+ + + +S +FA+ P + R F QV+ +D
Sbjct: 242 -QNP---LFRTEITYAITPSAPGQVYDFWAVSRNFAT---DDPAVTEFLRDFNHQVVMQD 294
Query: 478 -LRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ L + Q+ + A L +G D G+ R
Sbjct: 295 VVALNILQKALDSESAGYQELSIGIDAGGLAAR 327
>gi|148554460|ref|YP_001262042.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499650|gb|ABQ67904.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 423
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 134/321 (41%), Gaps = 39/321 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRG-KDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ A + +++ D + EP ++FR + G P + + C HR PL G +
Sbjct: 84 LRNAWYVAALAGEVEADLLRRLILGEPVLLFRDEQSGAPSALHDLCPHRFAPLSRGKRVD 143
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPG--DEPPTAT 321
G IQC YHG ++ GKC P R +++ P E+ GMIWIW G D +
Sbjct: 144 GGIQCGYHGLVFAPSGKCVLNPHGNGRILPTAAVRAFPVIERHGMIWIWMGEHDLADPSR 203
Query: 322 IPCLLPPSGFEIHAEIVMELPI--EHGLLLDNLLDLAHAPFTHTSTFAKGWS---VPSLV 376
IP + LP + LL DN+LD +HA + H + G + P +
Sbjct: 204 IPDFSYLDAADQRTRGAGYLPTRANYQLLTDNILDASHADYLHALLDSDGGTRHEAPRVQ 263
Query: 377 KFLTPASGLQGYWDPYP----IDMEFRPPCMVLSTIGI--SKPGKL--------EGQNTR 422
+ + + W P + + P V + + + P + EG+
Sbjct: 264 ELGDGSVEVSWTWGPASPMKFLSHMYAPGAEVHTRLAVRWHAPSAMHLRISSAAEGEELD 323
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYR--MSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 480
Q +H+ P + ++T Y S D A+ F++ R FA +ED +
Sbjct: 324 Q-GLQAEAMHIMTPETARQTHYFYGGVRSFDVANDAYTAAFLEGARRAFA----DEDKPM 378
Query: 481 VLGQQERMNNGANVWNL-PVG 500
+ Q M + +++ + P+G
Sbjct: 379 IEAVQANMGDETDIFAMRPLG 399
>gi|282900953|ref|ZP_06308886.1| hypothetical protein CRC_02369 [Cylindrospermopsis raciborskii
CS-505]
gi|281194044|gb|EFA69008.1| hypothetical protein CRC_02369 [Cylindrospermopsis raciborskii
CS-505]
Length = 354
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 23/193 (11%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
N L+N W+ S+ LK M EP + R K+G +++ C HRA PL G
Sbjct: 6 NILLRNLWYYALPSSQLKTGKMVSRVLLKEPILFTRDKNGQVFAIEDICPHRAVPLSCGR 65
Query: 264 VNEGRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDE- 316
+ +++C YHGW +++ GKC ++P S L +KS P +E +G IWI+ D+
Sbjct: 66 FDGEQVECCYHGWRFNSQGKCTEIPSLLPEQSIDLSRFNVKSYPVYETQGNIWIYMYDKE 125
Query: 317 -PP----TATIPCLLPPSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAKG 369
PP IP + S E VM+ P I+H + L+D AH+P+ H + +
Sbjct: 126 GPPINAEIGDIPQVPGFSNREPDLVEVMKFPCFIDHA--VTGLMDPAHSPYVHQVWWWRS 183
Query: 370 WSVPSLVKFLTPA 382
+ VK P+
Sbjct: 184 GKLHEEVKQFDPS 196
>gi|445425152|ref|ZP_21437231.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
WC-743]
gi|444753805|gb|ELW78443.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
WC-743]
Length = 358
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ + D++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACYPEDIQDKPLGRTICGEKIVFYRGKENKVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG +GK MP+ ++ K+ E+ G IW+WPGD+ L
Sbjct: 63 NLVCGYHGLVMGCEGKTISMPAQRVNGFPCNKAYAAIEKFGFIWVWPGDQ--ALADESKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIHCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|152995325|ref|YP_001340160.1| Rieske (2Fe-2S) domain-containing protein [Marinomonas sp. MWYL1]
gi|150836249|gb|ABR70225.1| Rieske (2Fe-2S) domain protein [Marinomonas sp. MWYL1]
Length = 367
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 144/355 (40%), Gaps = 56/355 (15%)
Query: 215 KNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
KN W+ A S ++ E +R D V + C HR L LG V +G
Sbjct: 8 KNMWYVAAMSEEVAGSKPLGRKICGESIAFYRSHDNEIAAVLDFCPHRGAALSLGYVEDG 67
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG + DGK ++MP +++ +KS E+ G IW+WPGD+ + L+
Sbjct: 68 LLVCGYHGLKMGADGKTKEMPLQRVKGFPCMKSYAVEERYGFIWVWPGDQ--SQADKDLI 125
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK---- 377
P + ++ E + + ++ L++DNL+DL H + H S+ + S V
Sbjct: 126 PHLEWAVNPEWAYGGGLYHINCDYRLMVDNLMDLTHETYVHASSIGQKEIDESPVSTKVE 185
Query: 378 -----------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK- 415
F A G D P+D F PP V+ +G++ G
Sbjct: 186 GDKVITSRFMENIMAPPFWRSALRGNGLADDVPVDRWQICRFSPPSHVMIDVGVAHAGHG 245
Query: 416 -LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE--- 471
E ++ ++ + + P + + M+ +F P Q L E
Sbjct: 246 GFEAPADKKASSTV--VDFITPETETSIWYFWGMARNFK------PEDQELTDTIREGQG 297
Query: 472 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD---ALEKGAKQLP 523
++ EDL ++ QQE + + L + D GV+ R D A E+ AKQ P
Sbjct: 298 KIFAEDLEVLERQQENLLAFPDYDLLKLDIDAGGVQSRRVIDRIIAKEQAAKQQP 352
>gi|444916129|ref|ZP_21236252.1| hypothetical protein D187_08534 [Cystobacter fuscus DSM 2262]
gi|444712629|gb|ELW53546.1| hypothetical protein D187_08534 [Cystobacter fuscus DSM 2262]
Length = 340
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 128/298 (42%), Gaps = 53/298 (17%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN-E 266
+ W PVA S +++ + E V+FR G +++ C HR L LG V +
Sbjct: 14 MAEVWTPVAMSREVRGKPLGLTLAGERIVLFRDGRGTLSALRDQCPHRGVKLSLGKVGAD 73
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-----IKSLPCFEQEGMIWIW--PGDEPPT 319
G ++CP+HGW +S G C +P L K + + P E+ G+IW++ PG E P
Sbjct: 74 GCLECPFHGWRFSASGSCTHIPLNALPEEKRQRYAVTAFPVRERGGLIWLYTRPGGEAPD 133
Query: 320 AT-IPCLLPPSGFEIHAEIVMELPIEH-GLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 377
+P L G +H E H ++N+LD H PF H T +G L +
Sbjct: 134 EPYVPESLEKPG--VHVGFYAETWNAHWTRAMENMLDSPHLPFVHQRTIGRG-----LRR 186
Query: 378 FLTPASGLQGYWDPYPI------DMEFRPPCMVLS-------TIGISKPGKLEGQNTRQC 424
+ P S ++ +P M+ PP L + I PG+
Sbjct: 187 RMKPESTMEVEVEPTSTGFRTWSSMDGVPPQGSLDWLRPNGMRLNIPIPGR--------- 237
Query: 425 ATHLHQLHV-CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
L QLH+ C+P TR+L + DF ++ P + R + ++L+ED +V
Sbjct: 238 ---LMQLHMWCIPVDANHTRMLLAAARDF---VRMQPLAALVDR-YNTRILHEDRAIV 288
>gi|218439150|ref|YP_002377479.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
gi|218171878|gb|ACK70611.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
Length = 474
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 30/296 (10%)
Query: 218 WFPVAFSTDLKDDTMEPWVIFRGK--------DGIPGCVQNTCAHRACPLHLGSVNE-GR 268
W+P+ + DL P+ + K + + C HR L G +NE G
Sbjct: 40 WYPIHYVKDLDKTKPTPFTLLDRKLVIWWDKNASVWRVFDDKCPHRLALLSEGRINEQGL 99
Query: 269 IQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGD--EPPT 319
I+CPYHGW +S GKCE +P + + + + SLP +G+++ +PG+ P
Sbjct: 100 IECPYHGWTFSGSGKCEFIPQQREGTNAEESKRACVTSLPTTVCQGLLFTYPGNPENAPK 159
Query: 320 ATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSVPSL 375
+P L SG + + +LP + LL+N+LD +H PFTH T + + P
Sbjct: 160 VKVPIIESLEDNSGEWVCIDTFRDLPYDALTLLENVLDASHVPFTHHGTVGNRNNAAPVE 219
Query: 376 VKFLTPA-SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVC 434
++ + G G W+ P T+ I+ ++Q L ++
Sbjct: 220 LELVKSGRQGFTGIWEEGPRKGTLGKQ----DTLFIAPNFMTHDLTSKQFGRTLTVVYAT 275
Query: 435 LPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLRLVLGQQERM 488
P S+ K RL R F+S L + + H + + ED ++ L QER
Sbjct: 276 -PISKGKCRLFARFPFQFSSKLPKFFINLTPRWYSHTNQNTILEDDQIFLHYQERF 330
>gi|170737389|ref|YP_001778649.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169819577|gb|ACA94159.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia MC0-3]
Length = 359
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 129/337 (38%), Gaps = 50/337 (14%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LKN W+ VA + D D E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRTADGQVAALEDFCPHRGAPLSLGFVRD 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
G + C YHG + +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLKMGCNGKPAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGDA--SEADPAK 119
Query: 326 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 362
LP + H + + ++ L++DNL+DL H + H
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPKTTS 179
Query: 363 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISK 412
TS F + P + +GL D P+D F PP V+ +G++
Sbjct: 180 HGDEVVTSRFMENVMPPPFWRMALRGNGLA---DDIPVDRWQICRFTPPSHVMIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
G + P + + M+ +F P + R +
Sbjct: 237 AGHGGYDAPPNKKASSIVVDFITPETDTSIWYFWGMARNFRP---DDPALTAEIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ EDL ++ QQ + L + D GV R
Sbjct: 294 IFAEDLEMLERQQRNLEQWPERTLLKLNIDAGGVLSR 330
>gi|170079201|ref|YP_001735839.1| Rieske iron-sulfur protein [Synechococcus sp. PCC 7002]
gi|169886870|gb|ACB00584.1| probable Rieske iron-sulfur protein [Synechococcus sp. PCC 7002]
Length = 452
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 134/324 (41%), Gaps = 36/324 (11%)
Query: 218 WFPVAFSTDLKDDTM--------EPWVIF-RGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
W+P+ F DL D T EP VI+ + K + C HR PL G + +G
Sbjct: 23 WYPIHFVQDL-DKTKPTRFVLLGEPLVIWWQPKTQQWQVFSDVCPHRLAPLSEGRIVDGC 81
Query: 269 IQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGD-----E 316
++CPYHGW+++ G C K+P + ++K+ ++G+++++ GD +
Sbjct: 82 LECPYHGWQFAETGACTKIPFQAPDGEAHHSPRAQVKTYASCVKQGLLFVYGGDRHEAAQ 141
Query: 317 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLV 376
P T+P L G + A++ ++P + LL+N+LD +H FTH + +
Sbjct: 142 TPIPTVPQLDQHPGEWVMADVFRDIPYDATTLLENVLDTSHVAFTHHPRVGNRKNAKEFI 201
Query: 377 KFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVC 434
++ +G G W+ P R + P + + +
Sbjct: 202 LDVSEVEKTGFTGNWEEGP-----RRGTLGSQKTTFFAPAAMWHDIPESPFGQVMTVVYA 256
Query: 435 LPSSRKKTRLLYRMSLDFASVLKHVP--FMQYLWRHFAEQVLNEDLRLVLGQQER----- 487
P+ + + R + R+ F + + + F + H + + ED ++ L QER
Sbjct: 257 TPTEKGRCRAIVRLPFRFKAAIPRLAFKFTPRWFSHLNQMGILEDDQIFLHLQERELAKS 316
Query: 488 MNNGANVWNLPVGYDKLGVRYRLW 511
N A LP D + YR W
Sbjct: 317 TQNYAKTCYLPTSSDLFVLAYRQW 340
>gi|84687663|ref|ZP_01015537.1| putative dioxygenase [Maritimibacter alkaliphilus HTCC2654]
gi|84664340|gb|EAQ10830.1| putative dioxygenase [Rhodobacterales bacterium HTCC2654]
Length = 441
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 24/184 (13%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM--------EPWVIFRGKDGIPGCVQN 250
++L GP ++ +W P S+DL+ D E ++FR +G G V +
Sbjct: 8 ETLVRVGPGTTMGDMMRLYWLPFMASSDLEKDGQPQTVKLLDETLIVFRDSEGRVGLVDH 67
Query: 251 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQ 305
C HR PL G + ++C YHGW++ DG MP+ R+ VKIKS PC E+
Sbjct: 68 ICPHRGAPLVFGRNEDCGLRCVYHGWKFDVDGNVADMPAEPPRSRLKDRVKIKSYPCVER 127
Query: 306 EGMIWIWPGDEPPTATIPCLLPPSGFEIH----AEIVMELPIEHGLLLDNL---LDLAHA 358
G++W + GDEP + P L PS FE + +V+ ++ L L +D AHA
Sbjct: 128 GGVVWTYMGDEPDESR-PAL--PS-FEWNMVPEENVVVTFRVQECNWLQALEGEIDSAHA 183
Query: 359 PFTH 362
P H
Sbjct: 184 PILH 187
>gi|393778405|ref|ZP_10366679.1| oxidoreductase subunit alpha [Ralstonia sp. PBA]
gi|392714676|gb|EIZ02276.1| oxidoreductase subunit alpha [Ralstonia sp. PBA]
Length = 372
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 17/161 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTME-------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-N 265
++N W+PV FS + K ++ P VI+R +G + C H+ PL + +
Sbjct: 7 VRNTWYPVGFSHEFKAGDLQGLKVADKPIVIWRTAEGEVVAFDDRCCHKRFPLSESKLLD 66
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 321
+GR++C YHG Y + GKC ++PS + + ++ ++P EQ+G++W+WPGD +T
Sbjct: 67 DGRLECAYHGLCYDSSGKCVEIPSQPDKAIPPQARLHTVPIKEQDGVVWLWPGDVEQAST 126
Query: 322 I-----PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAH 357
+ P L S + +E P + LL++NLLD++H
Sbjct: 127 LNPPRTPELTDTSCVTAVSPERIEAPANYLLLIENLLDISH 167
>gi|295698951|ref|YP_003606844.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295438164|gb|ADG17333.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 366
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 96/238 (40%), Gaps = 41/238 (17%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + EP V +R +G +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACMPDEVADKPLGRQICGEPMVFYRNAEGAVVALEDFCPHRGAPLSLGFVRDGT 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL-- 325
+ C YHG E GK MP ++ I+S P E+ G +W+WPGD
Sbjct: 64 LVCGYHGLEMGCQGKATGMPGQRVNGFPSIRSFPVIERYGFVWVWPGDAAKADAAKLHHL 123
Query: 326 -LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH---------------------- 362
S + + + ++ L++DNL+DL H + H
Sbjct: 124 EWAESAEWAYGGGLYHIRCDYRLMIDNLMDLTHETYVHANSIGQKEIDEAAPKTVAEGDT 183
Query: 363 --TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
TS F + + P K +GL D P+D F PP VL +G++ G
Sbjct: 184 VRTSRFMENVAAPPFWKMALRGNGLA---DDVPVDRWQICHFTPPSHVLIEVGVAHAG 238
>gi|320108711|ref|YP_004184301.1| Rieske (2Fe-2S) domain-containing protein [Terriglobus saanensis
SP1PR4]
gi|319927232|gb|ADV84307.1| Rieske (2Fe-2S) iron-sulfur domain protein [Terriglobus saanensis
SP1PR4]
Length = 365
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 47/301 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L FW+PVAFS+++ D E V++R DG ++ C HR PL LG V
Sbjct: 43 LAPFWYPVAFSSEVTDKPYGARLLDERVVVYRLSDGSLAAAKDICYHRGAPLSLGHVEGD 102
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTATIP 323
I C YHG Y+ +G+C +P+ + ++ + P E G++W+ E A +P
Sbjct: 103 EIICKYHGLRYNAEGRCTCIPAHPKGAISPRLRLHTFPVREAFGLVWVRLV-ERGEALLP 161
Query: 324 CLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVKF 378
+ PS ++ + V + G ++ LD++H F H TF KG + VP
Sbjct: 162 EMKEWDDPSYLQVLPDSVT-MKASAGRQMEGFLDVSHFAFVHLETFGKGENPEVPDYTVE 220
Query: 379 LTPASGLQGYWDP---YPIDME-FRPPCMV-----------LSTIGISKPGKLEGQNTRQ 423
TP + Y+ Y + + PP + + + + PG +GQ
Sbjct: 221 QTPQGFVADYYSTVSNYSVGYKHLNPPGFLWRRRFEVFTPFTAKLTVFFPG--DGQ---- 274
Query: 424 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 483
LH L+V P S +KTRL + +F + P L F QV ED +V
Sbjct: 275 ----LHILNVASPVSARKTRLFVPICRNFD---RDAPLQATL--DFNHQVFAEDQAIVEQ 325
Query: 484 Q 484
Q
Sbjct: 326 Q 326
>gi|423095397|ref|ZP_17083193.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas fluorescens
Q2-87]
gi|397888921|gb|EJL05404.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas fluorescens
Q2-87]
Length = 361
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 122/313 (38%), Gaps = 46/313 (14%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
E V +RG +G V++ C HR PL LG V G + C YHG DGK MP ++
Sbjct: 28 EKMVFYRGHEGKVAAVEDFCPHRGAPLSLGYVENGNLVCGYHGLVMGADGKTVDMPGQRV 87
Query: 293 RNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-----VMELPIEHG 346
R KS E+ G IW+WPGD+ P L+ P + + E + + ++
Sbjct: 88 RGFPCNKSFAVQERHGFIWVWPGDQ--ALADPALIHPLEWAENEEWAYGGGLFHIQCDYR 145
Query: 347 LLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG----------------YW- 389
L++DNL+DL H + H S+ + + P + + G +W
Sbjct: 146 LMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPETTVNGDEVVTARHMENIMAPPFWR 200
Query: 390 ---------DPYPIDM----EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLP 436
D P+D F PP VL +G++ G Q + P
Sbjct: 201 MALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAHAGHGGYHAAPQFKASSIVVDFITP 260
Query: 437 SSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWN 496
+ + M+ F + + R ++ +EDL ++ QQ + +
Sbjct: 261 ETETSIWYFWGMARHFQPQDE---ALTATIREGQGKIFSEDLEMLERQQRNLLDHPQRNL 317
Query: 497 LPVGYDKLGVRYR 509
L + D GV+ R
Sbjct: 318 LKLNIDAGGVQSR 330
>gi|392944484|ref|ZP_10310126.1| ring-hydroxylating dioxygenase, large terminal subunit [Frankia sp.
QA3]
gi|392287778|gb|EIV93802.1| ring-hydroxylating dioxygenase, large terminal subunit [Frankia sp.
QA3]
Length = 373
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L++ W PVA S ++ D+ + EPWVI R DG+ + C HR PL G VN
Sbjct: 12 LRHGWHPVARSGEVADEPVPVRLLGEPWVIARLDDGL-AAFADRCPHRLAPLSAGRVNAH 70
Query: 268 RIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
+ C YHGW + G+C +P+ R E+ G+IWI P +EP T
Sbjct: 71 ELVCGYHGWRFVASGECTAVPALGPGVPAPRRARATPPWGVVERHGLIWIAP-EEPFTDL 129
Query: 322 IPCLLPPSGFEIHAEIVMELPIEH----GLLLDNLLDLAHAPFTHTSTFAKG 369
I P E + V P GLL DN LD AH PF H T G
Sbjct: 130 IEV---PEADEAGFDSVWLEPSRSSACAGLLADNFLDTAHFPFVHADTIGAG 178
>gi|424072288|ref|ZP_17809709.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe037]
gi|407997942|gb|EKG38371.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe037]
Length = 354
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 133/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D M E V +R ++ V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPMGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK ++ + P + + M+ +F + + R +
Sbjct: 237 AGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADE---ALTASIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 294 IFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|325048236|emb|CBW54656.1| putative methylase [Streptomyces sp. JS360]
Length = 358
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 113/271 (41%), Gaps = 40/271 (14%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+S ++ + +P V++R DG + + CAHRA PL G I
Sbjct: 5 NTWYVAAWSAEVTAKPVRRVICKQPIVLYRTPDGGAVALADRCAHRAYPLSEGRTVGDSI 64
Query: 270 QCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPG-----DEPPTATI 322
+C YHG+ Y DG C ++P+ +++S P E++G IW+W G DE
Sbjct: 65 ECGYHGFAYGPDGACTRVPAQSAIPARARVRSYPVVEKDGWIWVWTGERELADESLVPDT 124
Query: 323 PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST------FAKGWSVPSLV 376
+ P+ + ++ E H L+ DNLLDL H F H +T + G +V
Sbjct: 125 HWMDDPAWATVTHTVLFEC--RHDLIHDNLLDLTHESFLHRTTVGDDYIYEHGITVEVDG 182
Query: 377 KFLTPASGLQGYWDP--YPIDM------------EFRPPCMVLSTIGISKPGKLEGQNTR 422
+ +T + G P Y M EF P + GI+ G+ R
Sbjct: 183 RVVTADRLMPGVQAPPLYARTMAAEGLYDRFHATEFHVPSYHVLHSGITGQGR-----PR 237
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
+ + L+ P K T Y S +FA
Sbjct: 238 EEGYLIKVLNGITPVDEKTTWYYYAFSRNFA 268
>gi|42524666|ref|NP_970046.1| oxidase-related protein [Bdellovibrio bacteriovorus HD100]
gi|39576876|emb|CAE78105.1| oxidase-related protein [Bdellovibrio bacteriovorus HD100]
Length = 346
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 22/177 (12%)
Query: 210 YNTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG 262
Y+ LKN W+ S +L + EP V +R G +++ C HR PL G
Sbjct: 2 YSGFLKNVWYVGIPSAELAVNKATARKILGEPIVFYRDSKGKVSAMRDICPHRGIPLSYG 61
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDE 316
V +I+CPYHGW++ G C ++PS +K++S P E +G+IW++ GD+
Sbjct: 62 RVVNDQIECPYHGWKFDGTGMCTEIPSLCPDQELNPNKIKVRSYPVHEAQGLIWVFVGDK 121
Query: 317 PPTATIPCLLP-----PSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTF 366
+ +P P+ + + V+ P ++H ++ L+D AH P+ H S F
Sbjct: 122 DYDVSKAPAIPVMKAFPADVKPNLTYVVNFPCHVDHAVI--GLMDPAHGPYVHKSWF 176
>gi|312960197|ref|ZP_07774708.1| vanillate demethylase A [Pseudomonas fluorescens WH6]
gi|311285419|gb|EFQ63989.1| vanillate demethylase A [Pseudomonas fluorescens WH6]
Length = 346
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 126/311 (40%), Gaps = 42/311 (13%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + E V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAHKPLGRQICGEKMVFYRGLEGAVVAVEDFCPHRGAPLSLGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 64 LVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW--SVPSLVKF-- 378
+ + E + ++ ++ L++DNL+DL H + H S+ + P L
Sbjct: 122 HLEWAVSDEWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPLTTVDG 181
Query: 379 --LTPASGLQG-----YW----------DPYPID----MEFRPPCMVLSTIGISKPGKLE 417
+ A ++ +W D P+D F PP VL +G++ GK
Sbjct: 182 DEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAHAGKGG 241
Query: 418 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNED 477
+ + P + + M+ +F H + R ++ +ED
Sbjct: 242 YHAAPEYKAASIVVDFITPQTDTSIWYFWGMARNFNP---HDEALTASIREGQGKIFSED 298
Query: 478 LRLVLGQQERM 488
L ++ QQ+ +
Sbjct: 299 LEMLERQQQNL 309
>gi|347528258|ref|YP_004835005.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136939|dbj|BAK66548.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 351
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
++N W+ +S D + EP V++R +G +++ C HRA PL G
Sbjct: 3 VRNCWYMAGWSKDFTGTDVQSVSILNEPLVMYRADNGSLVALEDRCPHRAAPLSKGRREG 62
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPG--DEPPTATI 322
++C YHG + DG C +P + ++V ++S E++G W+W G D A I
Sbjct: 63 NDLRCMYHGIMFGPDGACTDLPGQPVIPKSVCVRSYNVIEKDGCAWVWMGEADRLDFALI 122
Query: 323 PCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P + P + + +++ E LL+DNLLD++HAP+ H +TF
Sbjct: 123 PNFIGPDHPDWAITQSQLDIDAEGQLLIDNLLDVSHAPYVHEATFG 168
>gi|299770978|ref|YP_003733004.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter oleivorans DR1]
gi|298701066|gb|ADI91631.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter oleivorans DR1]
Length = 358
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ KS E+ G IWIWPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKSYAVVEKFGFIWIWPGEKALADETK--L 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + HAE + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHAEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|451942886|ref|YP_007463522.1| vanillate O-demethylase oxygenase [Corynebacterium halotolerans YIM
70093 = DSM 44683]
gi|451902273|gb|AGF71160.1| vanillate O-demethylase oxygenase [Corynebacterium halotolerans YIM
70093 = DSM 44683]
Length = 373
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 139/356 (39%), Gaps = 59/356 (16%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ A+ ++ + +P ++R +DG + + C HR PL G + GR
Sbjct: 20 NAWYVAAWDHEVTSKGITSRTIANKPLALYRTQDGRAVALADACWHRLAPLSKGKLT-GR 78
Query: 269 --IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
IQCPYHG Y++ G+C MP+ + N + S P EQ IW+W GD PT P
Sbjct: 79 DGIQCPYHGLVYNSAGRCMSMPAQETLNPSAAVPSYPVVEQHRYIWVWLGD--PTLADPT 136
Query: 325 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG---------- 369
L+P H + + + L+LDNL+DL H F H ST +
Sbjct: 137 LVPDMHQMDHPDWTGDGKTIAAACNYQLVLDNLMDLTHEEFVHASTIGQDELSESDFEVT 196
Query: 370 --------------------WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 409
W KF G +G D + I + + P + +G
Sbjct: 197 HTEDSVTVSRWMHDIDAPPFWQKNMNDKF----PGFEGKVDRWQI-IHYYYPSTICIDVG 251
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 469
++K G + R + + ++ P S + + + ++ + + R
Sbjct: 252 VAKAGTGAPEGDRSQGVNGYVMNTITPESDRSSHYFWSFQRNYRLDSQ---LITTQLREG 308
Query: 470 AEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLP 523
V ED ++ QQ+ + N ++L + + VR L + +G +P
Sbjct: 309 VHGVFGEDEDMLTAQQDAIDANPDHEFYSLNIDAGGMWVRRILEKALAAEGRLDIP 364
>gi|254409954|ref|ZP_05023734.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196182990|gb|EDX77974.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 446
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 141/337 (41%), Gaps = 59/337 (17%)
Query: 218 WFPVAFSTDLKDDTMEPWVIFRGKDGIP---------GCVQNTCAHRACPLHLGSVNE-G 267
W+PV + DL D + G+D + + C HR PL G + E G
Sbjct: 11 WYPVHYLKDL-DQSQPTQFTLLGRDLVIWWDKVADRWRVFDDQCPHRLAPLSQGRIAEDG 69
Query: 268 RIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG--DEPP 318
++CPYHGW ++ G C+++P + + + +LP E +G+++++PG + P
Sbjct: 70 LLECPYHGWAFTGAGTCDRIPQQTEDSSAQTSQRACVTALPTTECQGLLFVYPGNPENAP 129
Query: 319 TATIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSVP 373
+P + P P G+ + + +LP + LL+N+LD++H PFTH + + + ++ P
Sbjct: 130 NVKVPIVEPLDDSPEGW-VCIDTFRDLPYDALTLLENVLDVSHVPFTHHRSVSDRAYASP 188
Query: 374 SLVKFLTPASGLQGY---WDPYP-------IDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 423
V+ SG QG+ W+ P D F P ++ + + G+
Sbjct: 189 --VELEVTESGKQGFKGVWEQGPRKGTLGRQDTTFLAPTLMWHDLTSKQFGR-------- 238
Query: 424 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLRLV 481
+ P + + RL R FAS L + + H + + ED ++
Sbjct: 239 ----TMTVVYATPIRKGECRLFARFPFKFASKLPGFFIKLTPRWYSHIGQNGVLEDDQIF 294
Query: 482 LGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
L QE N + + LP D+ R W
Sbjct: 295 LHYQEHYLESKGGSANFSKAFYLPTKADRFVFELRQW 331
>gi|209965428|ref|YP_002298343.1| Rieske [2Fe-2S] domain-containing protein [Rhodospirillum centenum
SW]
gi|209958894|gb|ACI99530.1| Rieske [2Fe-2S] domain protein [Rhodospirillum centenum SW]
Length = 344
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L++ W+ LK M EP + RG DG +++ C HR PL G +
Sbjct: 8 LQDLWYFALPGRALKRGRMLAKTLLGEPVLFGRGADGAAFALRDICPHRGIPLSCGRFDG 67
Query: 267 GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIW-----PGD 315
++C YHGW + DG C +PS L ++++S P E G +WIW P
Sbjct: 68 REVECCYHGWRFGADGGCTAIPSLVEGQAFDLSRIRVRSYPVRELNGNVWIWMGSGEPDG 127
Query: 316 EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
EPP +P P ++ + ++H ++ L+D AH PF H S F
Sbjct: 128 EPP--AMPGFAPDRAADMVEVMAFPCFVDHAVI--GLMDPAHGPFVHRSWF 174
>gi|378950713|ref|YP_005208201.1| putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas fluorescens F113]
gi|359760727|gb|AEV62806.1| putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas fluorescens F113]
Length = 361
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 128/335 (38%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDEIADKPLGRQICGEKMVFYRGHEGKVAAVEDFCPHRGAPLSLGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEP---PTATIPC 324
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P
Sbjct: 64 LVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVQERHGFIWVWPGDQALADPALIHHL 123
Query: 325 LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 124 EWAESDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPVTT 178
Query: 385 LQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISKPG 414
++G +W D P+D F PP VL +G++ G
Sbjct: 179 VEGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
Q + P + + M+ F + + R ++
Sbjct: 239 NGGYHAAPQFKASSIVVDFITPETETSIWYFWGMARHFQPQDE---ALTASIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+EDL ++ QQ + + L + D GV+ R
Sbjct: 296 SEDLEMLERQQRNLLDHPQRNLLKLNIDAGGVQSR 330
>gi|422641743|ref|ZP_16705165.1| Rieske [2Fe-2S] region [Pseudomonas syringae Cit 7]
gi|440745647|ref|ZP_20924937.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP39023]
gi|330954129|gb|EGH54389.1| Rieske [2Fe-2S] region [Pseudomonas syringae Cit 7]
gi|440372280|gb|ELQ09088.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP39023]
Length = 354
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 132/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R +D V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQDQQVIAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALIH 121
Query: 328 PSGFEI-----HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + + + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDDWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK ++ + P + + M+ +F + R +
Sbjct: 237 AGKGGYHAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADAE---LTASIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 294 IFTEDLEMLERQQQNLLTHPHRSLLKLNIDAGGVQSR 330
>gi|3915234|sp|O05616.1|VANA_PSEUH RecName: Full=Vanillate O-demethylase oxygenase subunit; AltName:
Full=4-hydroxy-3-methoxybenzoate demethylase
gi|1946284|emb|CAA72287.1| a-subunit oxygenase [Pseudomonas sp.]
Length = 354
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 101/238 (42%), Gaps = 39/238 (16%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +RG +G V++ C HR PL LG V +G+
Sbjct: 4 KNAWYVACTPDEIADKPLGRQICNEKIVFYRGPEGRVAAVEDFCPHRGAPLSLGFVRDGK 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG E +GK MP +++ IKS E+ G IW+WPGD P L+
Sbjct: 64 LICGYHGLEMGCEGKTLAMPGQRVQGFPCIKSYAVEERYGFIWVWPGDR--ELADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK----- 377
+ + E + + ++ L++DNL+DL H + H S+ + + V
Sbjct: 122 HLEWADNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVSTRVEG 181
Query: 378 ----------------FLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK 415
F A G D P+D F PP VL +G++ GK
Sbjct: 182 DTVITSRYMDNVMAPPFWRAALRGNGLADDVPVDRWQICRFAPPSHVLIEVGVAHAGK 239
>gi|375093382|ref|ZP_09739647.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora marina XMU15]
gi|374654115|gb|EHR48948.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora marina XMU15]
Length = 354
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 117/285 (41%), Gaps = 50/285 (17%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
T +N W+ A+S ++ + EP V +R + G + + C HR PL +
Sbjct: 2 TTFARNQWYVAAYSREIGRELFPRTILGEPIVFYRTEAGEAVALADRCVHRRYPLSESRL 61
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPGDE------ 316
+ +I C YHG+ Y G C +P T++ R ++ S P EQ+ +W+W GD
Sbjct: 62 DGDKIVCGYHGFTYDKAGSCVFVPGQTRIPRTARVPSYPLVEQDSFVWVWIGDHDKADPA 121
Query: 317 ----PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF------ 366
P + P SG E L + LL+DNL+DL+H + H
Sbjct: 122 LIPRAPWLSDPAYTTVSGME-------PLAARYDLLVDNLMDLSHETYLHGGYIGTPEVA 174
Query: 367 -----------------AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 409
++ + F ++G++G + D+E+ PPC+ L
Sbjct: 175 NTPISTEVDEEKEVIYVSRHMADAECPSFYAKSTGIEGRITRWQ-DIEYHPPCLYLLHSR 233
Query: 410 ISKPGKLEGQN-TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
++ G L + T A H+ ++ P + T + ++ DFA
Sbjct: 234 VAPVGVLPADDGTDPDAFHVEVVYAITPETEHSTHDFWAVARDFA 278
>gi|426405189|ref|YP_007024160.1| oxidase-like protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425861857|gb|AFY02893.1| oxidase-related protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 346
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 22/177 (12%)
Query: 210 YNTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG 262
Y+ LKN W+ S +L + EP V +R G +++ C HR PL G
Sbjct: 2 YSGFLKNVWYVGLPSAELAVNKATARKILGEPIVFYRDSKGKVSAMRDICPHRGIPLSYG 61
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDE 316
V +I+CPYHGW++ G C ++PS +K++S P E +G+IW++ GD+
Sbjct: 62 RVVNDQIECPYHGWKFDGTGMCTEIPSLCPDQELNPNKIKVRSYPVHEAQGLIWVFVGDK 121
Query: 317 PPTATIPCLLP-----PSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTF 366
+ +P P+ + + V+ P ++H ++ L+D AH P+ H S F
Sbjct: 122 DYDVSKAPAIPVMKAFPADVKPNLTYVVNFPCHVDHAVI--GLMDPAHGPYVHKSWF 176
>gi|323358581|ref|YP_004224977.1| phenylpropionate dioxygenase [Microbacterium testaceum StLB037]
gi|323274952|dbj|BAJ75097.1| phenylpropionate dioxygenase [Microbacterium testaceum StLB037]
Length = 369
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 138/358 (38%), Gaps = 61/358 (17%)
Query: 215 KNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-NE 266
+N W+ A+ ++ + P ++R +DG + + C HR PL G++
Sbjct: 14 RNAWYVAAWDHEVGRKKILARTVAGRPLALYRTEDGRAVALADACWHRLAPLSQGTLMGP 73
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
I+CPYHG Y + G+C MP+ + N + S P ++ +W+W GD P P
Sbjct: 74 EDIRCPYHGITYDSRGRCTSMPAQETINPSALVPSFPVVDRYRYVWVWVGD--PALADPD 131
Query: 325 LLPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 372
L+P G IHA P + L+LDNL+DL H F H+S+ K S
Sbjct: 132 LIPDMHQMTDAAWTGDGLTIHA------PCNYQLILDNLMDLTHEEFVHSSSIGQKELSE 185
Query: 373 PSLVKFLTPAS-------------------------GLQGYWDPYPIDMEFRPPCMVLST 407
V T + G G D + I + F P +
Sbjct: 186 SEFVTSHTDTTVTVERWMHDIEAPPFWLKNMRDKFPGFSGRVDRWQI-IHFEAPSTICID 244
Query: 408 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 467
+G++K G + R + + ++ P + + + + ++ + + R
Sbjct: 245 VGVAKAGTGAPEGDRSQGVNGYVMNTITPETARSSHYFWSFQRNYRLDSQ---LITTQLR 301
Query: 468 HFAEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLP 523
V ED ++ QQ + N ++L + + VR L R L +G P
Sbjct: 302 DGVHGVFGEDEAMLAAQQAAIDANPDYEFYSLNIDAGGMWVRRILERMLLAEGRDHAP 359
>gi|443312467|ref|ZP_21042084.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
gi|442777445|gb|ELR87721.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
Length = 338
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 15/186 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+ FW+P +T+L + E VI+ K G P VQ+ C HR+ L +G V +G
Sbjct: 9 LRKFWYPAIPTTELSNSPNPFELLGEKIVIWLDKAGKPAAVQDRCCHRSAQLSIGKVVDG 68
Query: 268 RIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
I C YHGW++++DG C +P T N KIKS C E+ G +W+ E P +P
Sbjct: 69 NICCAYHGWQFNSDGACVCVPQLKDETIPANYKIKSYRCTERYGYVWV--CLEEPLIDLP 126
Query: 324 CLLPPS--GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLVKFLT 380
+ + + + E +++N DLAH F HT+TF ++ +P +K
Sbjct: 127 EIDEATKPDYRLLHEFYELWKCAALRVMENEFDLAHPTFVHTTTFGSEEHPIPESMKLTE 186
Query: 381 PASGLQ 386
GL
Sbjct: 187 TEWGLH 192
>gi|148554605|ref|YP_001262187.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148499795|gb|ABQ68049.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 357
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 86/185 (46%), Gaps = 24/185 (12%)
Query: 207 VQPYNTRL----KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRA 256
VQPY +N W+ AFS ++ + M + V +R + G P + + C HRA
Sbjct: 6 VQPYYPGTLPAPRNAWYVCAFSDEVGERPMSRRILGDRIVFYRTEAGDPVALADYCPHRA 65
Query: 257 CPLHLGSVNEG-RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWP 313
L G EG RIQC YHG E+ DG C ++PS + R + +S P E+ IWIW
Sbjct: 66 VALSHGKRVEGDRIQCIYHGMEFGPDGHCRRVPSQKAVPRAMATRSYPLAERWRWIWIWM 125
Query: 314 GDEPPTATIPCLLP---------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 364
GD P A L+P GF M++ LL +NLLD++H F H
Sbjct: 126 GD--PDAADESLIPDHSTFGLGEDDGFYKIQRFRMDIGGSFQLLHENLLDVSHITFLHEG 183
Query: 365 TFAKG 369
F G
Sbjct: 184 MFDSG 188
>gi|328544481|ref|YP_004304590.1| vanillate O-demethylase oxygenase [Polymorphum gilvum SL003B-26A1]
gi|326414223|gb|ADZ71286.1| Vanillate O-demethylase oxygenase, iron-sulfur subunit (Modular
protein subunit from monooxygenase) (VanA-like)
[Polymorphum gilvum SL003B-26A1]
Length = 348
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 128/328 (39%), Gaps = 42/328 (12%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++ + +P V++R G + + C HR PL G +N +
Sbjct: 9 NAWYAAAYDVEVGRSLLARKICNKPIVMYRKTTGEAVALADACWHRLVPLSGGELNGDNV 68
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
CPYHG E+ G+C MPS + N +KS P E+ +WIWPGD P P +P
Sbjct: 69 ICPYHGLEFDDSGRCVYMPSQETINPSACVKSYPVVEKHRFVWIWPGD--PALADPAKVP 126
Query: 328 PSGFEIHAEIV-----MELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------- 368
+ E + + ++ L++DNL+DL H F H S+
Sbjct: 127 DMHWINDPEWAADGKRIHVKCDYRLVVDNLMDLTHETFVHGSSIGNRAVAEAPFQTTHTD 186
Query: 369 ------GWSVP-SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
W + F G + + D + I + F+ P + +G++ G Q
Sbjct: 187 RTATVTRWMIDIDAPPFWAGQLGRKEHVDRWQI-IHFQAPSTICIEVGVAPTGTGAPQGD 245
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
R L+ P + K + + + H + R V ED ++
Sbjct: 246 RSKGVEGMVLNTMTPETDKTCHYFWAFARHYDI---HNQARTHQLREGVSTVFREDEAVL 302
Query: 482 LGQQERMNNGAN--VWNLPVGYDKLGVR 507
QQ+ +++ + +NL + + R
Sbjct: 303 EAQQKAIDDNPDHVFYNLNIDAGSMWAR 330
>gi|289626695|ref|ZP_06459649.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. aesculi str. NCPPB 3681]
gi|289646261|ref|ZP_06477604.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. aesculi str. 2250]
gi|422581971|ref|ZP_16657111.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. aesculi str. 0893_23]
gi|330866818|gb|EGH01527.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. aesculi str. 0893_23]
Length = 354
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 140/358 (39%), Gaps = 57/358 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ +++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTSAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PSLIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK + + P + + M+ +F + + R +
Sbjct: 237 AGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQRK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 525
+ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 294 IFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|109897171|ref|YP_660426.1| Rieske (2Fe-2S) domain-containing protein [Pseudoalteromonas
atlantica T6c]
gi|109699452|gb|ABG39372.1| Rieske (2Fe-2S) region [Pseudoalteromonas atlantica T6c]
Length = 349
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 132/320 (41%), Gaps = 45/320 (14%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 295
V FR G +++ C HR PL LG V G++ C YHG DG + MP N
Sbjct: 35 VFFRNTHGTVVALEDFCPHRGAPLSLGKVENGQLVCGYHGLRMGDDGATKAMP-----NQ 89
Query: 296 KIKSLPCF------EQEGMIWIWPGDE--PPTATIPCLLPPSGFEI-HAEIVMELPIEHG 346
++++ PC E+ G IWIWPGD+ + +P L P+ + + + ++
Sbjct: 90 RVQAFPCIQRYAVVERYGYIWIWPGDKSLADESLLPKLEWPNNPNWGYGGGLYHIKCDYR 149
Query: 347 LLLDNLLDLAHAPFTHTSTFAK-------------GWSVPS---LVKFLTP---ASGLQG 387
L++DNL+DL H + H S+ + G S+ + + + P AS L+
Sbjct: 150 LMIDNLMDLTHETYVHASSIGQKEIDEAPVTTKVDGESIVTSRFMDNVMAPPFWASALRA 209
Query: 388 --YWDPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKK 441
D P+D F P ++ +G++ GK ++C + P S
Sbjct: 210 NDLADDIPVDRWQICRFNLPSHIMIEVGVAHAGKGGYLAPKECKASSIVVDFITPESDHS 269
Query: 442 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGY 501
+ M+ DF + R + EDL ++ QQE + + L +
Sbjct: 270 IWYFWGMARDFKPQDSE---LTNSIRSGQGAIFAEDLDVLERQQENLLRHPDRTLLKLDI 326
Query: 502 DKLGVRYRLWRDALEKGAKQ 521
D GVR R +E+ KQ
Sbjct: 327 DAGGVRARR---MIERAIKQ 343
>gi|109897194|ref|YP_660449.1| Rieske (2Fe-2S) domain-containing protein [Pseudoalteromonas
atlantica T6c]
gi|109699475|gb|ABG39395.1| Rieske (2Fe-2S) region [Pseudoalteromonas atlantica T6c]
Length = 357
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 85/173 (49%), Gaps = 18/173 (10%)
Query: 206 PVQPYNTRLKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPL 259
P + ++ ++N W+ AFST++ + ME P V++R +DG P + C HR PL
Sbjct: 3 PFKYKSSIVRNRWYMAAFSTEITREPMERTMLNKPVVMYRKEDGTPVAMYGLCPHRYLPL 62
Query: 260 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI--KSLPCFEQEGMIWIWPGDEP 317
G V I C YHG++++ G+C ++PS +I E+ + WIW GDE
Sbjct: 63 VQGRVEGDAIVCGYHGFKFADTGECIQIPSQPKVTGRICQPVYKIIEKGPICWIWMGDED 122
Query: 318 PTATIPCLLPP--------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
L+PP G++ H+ L LL+DNL+DL H P+ H
Sbjct: 123 KCDI--DLIPPYEDFGLDQPGWDFHSANYFHLEGRSQLLVDNLMDLTHLPYVH 173
>gi|422595142|ref|ZP_16669431.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. lachrymans str. M301315]
gi|330985448|gb|EGH83551.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. lachrymans str. M301315]
Length = 354
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 140/358 (39%), Gaps = 57/358 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ +++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK + + P + + M+ +F + + R +
Sbjct: 237 AGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQRK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 525
+ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 294 IFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|422607380|ref|ZP_16679380.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. mori str. 301020]
gi|330891022|gb|EGH23683.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. mori str. 301020]
Length = 354
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 140/358 (39%), Gaps = 57/358 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ +++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK + + P + + M+ +F + + R +
Sbjct: 237 AGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTTTIREGQRK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 525
+ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 294 IFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|383786720|ref|YP_005471289.1| ring-hydroxylating dioxygenase, large terminal subunit
[Fervidobacterium pennivorans DSM 9078]
gi|383109567|gb|AFG35170.1| ring-hydroxylating dioxygenase, large terminal subunit
[Fervidobacterium pennivorans DSM 9078]
Length = 327
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 26/176 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 264
+KN W+ V S++LK + E ++R + G C+ + C HR L G +
Sbjct: 2 IKNQWYVVLSSSELKKGQLIGLTRFGEKLAMWRDEKGDVHCISDICCHRGASLSHGKLLA 61
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT 319
N R+ CP+HG+EY GK + +PS N K+KS +E IWIW GD P
Sbjct: 62 NGERLMCPFHGFEYDPTGKVQAIPSNGRTAPVPENFKVKSYKTYELADFIWIWYGDNDPP 121
Query: 320 ATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
+ PPS F+ ++++ + + ++N LD H PF H +T +G
Sbjct: 122 S------PPSYFDDIDDSLVYSQFSEIWNVHYSRAIENQLDPIHVPFVHYNTIGRG 171
>gi|393778388|ref|ZP_10366662.1| Rieske (2Fe-2S) protein [Ralstonia sp. PBA]
gi|392714659|gb|EIZ02259.1| Rieske (2Fe-2S) protein [Ralstonia sp. PBA]
Length = 360
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+P+ ++ D+ + E V++R +DG +Q+ C HR PL LG +
Sbjct: 4 VRNVWYPLGWAEDIGRELSRHMVLEEAIVVYRREDGKIAALQDACPHRLAPLSLGKLKGD 63
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
I+C YHG + GKC ++P ++ N +++ P E+ G+ WIW GD P L
Sbjct: 64 TIECGYHGMTFDCSGKCVRIPGQEIIPGNAVVRAYPIEEKYGLAWIWMGD-------PAL 116
Query: 326 LPPSGFEIHAEI-----------VMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSV 372
P+ A+ + + + L DNLLD AH F H ST G +V
Sbjct: 117 ADPAKLFHIAQYDDPNWRAVKGGTLRIDCNYLSLCDNLLDPAHVTFVHPSTLGTPAGATV 176
Query: 373 P 373
P
Sbjct: 177 P 177
>gi|257484173|ref|ZP_05638214.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
gi|422678907|ref|ZP_16737181.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
gi|331008254|gb|EGH88311.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
Length = 354
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 140/358 (39%), Gaps = 57/358 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ +++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK + + P + + M+ +F + + R +
Sbjct: 237 AGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQRK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 525
+ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 294 IFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERTSTAEQIPVM 351
>gi|402702325|ref|ZP_10850304.1| oxidoreductase subunit alpha [Pseudomonas fragi A22]
Length = 352
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 136/340 (40%), Gaps = 58/340 (17%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +R ++ V++ C HR PL LG V+ G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEKIVFYRAQENRVAAVEDFCPHRGAPLSLGYVDNGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 64 LVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTYAAVERYGFIWVWPGDQ--DLADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHINCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEVAPT 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D +D F PP VL +G++
Sbjct: 177 TTVEGHEVVTARHMENIMPPPFWRMALRGNNLADDVLVDRWQICRFSPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE- 471
GK + + P + + M+ +F P Q L E
Sbjct: 237 AGKGGYHAAPEFKASSIVVDFITPETETSIWYFWGMARNFN------PQDQALTDTIREG 290
Query: 472 --QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
Q+ +EDL ++ QQ+ + + + L + D GV+ R
Sbjct: 291 QGQIFSEDLEMLERQQQNLLDHPHRALLKLNIDSGGVQSR 330
>gi|443622585|ref|ZP_21107107.1| putative Alpha-subunit oxygenase [Streptomyces viridochromogenes
Tue57]
gi|443343894|gb|ELS58014.1| putative Alpha-subunit oxygenase [Streptomyces viridochromogenes
Tue57]
Length = 353
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 124/279 (44%), Gaps = 41/279 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SVN 265
+N W+ A+S ++ + + E V++R + DG P + + C HR PL ++
Sbjct: 6 RNQWYVAAYSHEVGRELLGRTILGETLVLYRTQEDGTPVVLHDRCVHRRYPLSEAPTRLD 65
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD----EPPT 319
RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD +P T
Sbjct: 66 GDRIVCGYHGFTYDTTGACVYVPGQKRIPRTARVASYPVVEQDSLIWVWIGDAALADPQT 125
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------TST 365
L G+ + + + ++GLL+DNLLDL+H + H T+
Sbjct: 126 IPRARHLDSPGW-VTVRGMEPIDCDYGLLVDNLLDLSHETYLHGGYIGTPEVAETPITTE 184
Query: 366 FAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 416
+G + + + F ++G++G + D+E+ PC+ + ++ G L
Sbjct: 185 VDEGAGIVRVSRHMDDAECPPFYAKSTGIRGRITRWQ-DIEYHAPCLYVLHSRVAPVGVL 243
Query: 417 -EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 454
E + H + PS K + +S D+A+
Sbjct: 244 PEADGSDPNGFHTEVTYAITPSGDGKVYDFWMVSRDWAT 282
>gi|15644039|ref|NP_229088.1| oxidase-related protein [Thermotoga maritima MSB8]
gi|418044556|ref|ZP_12682652.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermotoga maritima
MSB8]
gi|4981841|gb|AAD36358.1|AE001783_9 oxidase-related protein [Thermotoga maritima MSB8]
gi|351677638|gb|EHA60785.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermotoga maritima
MSB8]
Length = 331
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 264
+KN W+ V S +LK + E +R +G C+ + C HR + G V
Sbjct: 2 IKNQWYVVLSSRELKKGQLIGVTRFGEKLAFWRDSNGKVHCISDICCHRGASISHGKVLS 61
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT 319
N R+ CP+HG+EY + G+ +P+ N ++KS P +E IWIW GD P
Sbjct: 62 NGERVMCPFHGFEYDSQGRVRTIPANGRNTPVPENFRVKSYPTYELADFIWIWYGDREPE 121
Query: 320 ATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
PP F+ ++ E + + ++N LD H PF H +T +G
Sbjct: 122 K------PPKYFDDITDELVYTEFKEVWNVHYSRAIENQLDPIHLPFVHYNTIGRG 171
>gi|113477750|ref|YP_723811.1| pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
gi|110168798|gb|ABG53338.1| Pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
Length = 465
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 143/350 (40%), Gaps = 42/350 (12%)
Query: 198 RKSLNV---SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVI--------FRGKDGIPG 246
+KS N+ +G P + W+P+ + DL+ + + + + K+
Sbjct: 7 KKSDNIPVSAGGTDPEYFDWQEVWYPIYYIEDLEKNKPTTFTLLEQDLVIWWEEKNNQWR 66
Query: 247 CVQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIK 298
++ C HR PL G +NE G ++CPYHGW +S G CE +P + + K+K
Sbjct: 67 VFEDQCPHRLAPLSQGRINEAGCLECPYHGWAFSGGGNCEIIPQQIAGGKAEKSSRAKVK 126
Query: 299 SLPCFEQEGMIWIWPGD-----EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 353
SLP +G+++++ G + P + L S I ++P + L++N+L
Sbjct: 127 SLPTKVCQGLLFVYAGKIENAAQTPIPKVDVLDENSNEWICLNTFRDVPYDGLTLMENVL 186
Query: 354 DLAHAPFTHTSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGIS 411
D +H P+TH T +V P ++ L G +G W+ P R +
Sbjct: 187 DASHIPYTHHRTVGNRANVAPVELEVLESGKWGFKGVWEEGP-----RKGTLGRQETTFI 241
Query: 412 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY---LWRH 468
PG + T + + P + + RL R F+S L F+Q + H
Sbjct: 242 APGMMWHDLTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSPLPKF-FIQLSPRWYSH 300
Query: 469 FAEQVLNEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
+ + ED ++ L QER N + + LP D R W
Sbjct: 301 IGQNGVLEDDQIFLHYQERYLEAKGGSANFSKAFYLPTKADLFVFELRSW 350
>gi|422302482|ref|ZP_16389845.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9806]
gi|389788306|emb|CCI16148.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9806]
Length = 460
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 131/339 (38%), Gaps = 57/339 (16%)
Query: 215 KNFWFPVAFSTDLK------------------DDTMEPWVIFRGKDGIPGCVQNTCAHRA 256
+ W+P+ + DL D + W +F K C HR
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDK----------CPHRL 70
Query: 257 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGM 308
PL G +NE G ++CPYHGW +S G CE +P + R ++SLP ++G+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSLPTAIRQGL 130
Query: 309 IWIWPGD--EPPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 363
++++ G+ P IP + P + I + +LP L++N++D +H P+TH
Sbjct: 131 LFVYAGNPENAPLTAIPIIEPMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHH 190
Query: 364 STFA-KGWSVPSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
T + + P ++ + + G +G W P R + PG + T
Sbjct: 191 LTIGNRANAAPMELEIIESNRQGFKGIWPEGP-----RKGQLGQQYSNFIAPGLIYHDLT 245
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLR 479
+ P + + RL R F S L + + H + + ED +
Sbjct: 246 SEKFGRTLTAVYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQ 305
Query: 480 LVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
+ L QER N + LP D L YR W
Sbjct: 306 IFLYYQERYLQAQGDSRNFSQACYLPTKADLLVFEYRNW 344
>gi|330809832|ref|YP_004354294.1| Vanillate monooxygenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423697481|ref|ZP_17671971.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas fluorescens
Q8r1-96]
gi|327377940|gb|AEA69290.1| Vanillate monooxygenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388004151|gb|EIK65478.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas fluorescens
Q8r1-96]
Length = 361
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 129/337 (38%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDEIADKPLGRQICGEKMVFYRGHEGKVAAVEDFCPHRGAPLSLGHVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL- 326
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 64 LVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVQERHGFIWVWPGDQ--ALADPALIH 121
Query: 327 ----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
S + + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAESDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ + G +W D P+D F PP VL +G++
Sbjct: 177 TTVDGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
G Q + P + + M+ F + + R +
Sbjct: 237 AGNGGYHAAPQFKASSIVVDFITPETETSIWYFWGMARHFQPQDE---ALTASIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ +EDL ++ QQ + + L + D GV+ R
Sbjct: 294 IFSEDLEMLERQQRNLLDHPQRNLLKLNIDAGGVQSR 330
>gi|8346964|emb|CAB93956.1| a-subunit oxygenase [Pseudomonas fluorescens]
Length = 353
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 131/341 (38%), Gaps = 59/341 (17%)
Query: 215 KNFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
KN W+ +L+ + P V +R +G V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDELQGQALGPARSAAKRMVFYRAHEGRVAAVEDFCPHRGAPLSLGYVENG 63
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 64 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--ALADPALI 121
Query: 327 -----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 381
+ + + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HHLEWADNDQWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 176
Query: 382 ASGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGIS 411
+ + G +W D P+D F PP VL +G++
Sbjct: 177 QTTVDGDQVVTARHMHNVMPPPFWRMALRGNQLADDVPVDRWQICRFSPPSHVLIEVGVA 236
Query: 412 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 471
G + Q + P S + M+ +F P Q L E
Sbjct: 237 HAGHGGYDASAQYKASSIVVDFITPESDTSIWYFWGMARNFN------PQDQALTESIRE 290
Query: 472 ---QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
++ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 291 GQGKIFSEDLEMLERQQQNLLAQPQRSLLKLNIDAGGVQSR 331
>gi|289767753|ref|ZP_06527131.1| oxidoreductase alpha subunit [Streptomyces lividans TK24]
gi|289697952|gb|EFD65381.1| oxidoreductase alpha subunit [Streptomyces lividans TK24]
Length = 356
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 144/338 (42%), Gaps = 51/338 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SVN 265
+N W+ A+S ++ + + EP V++R + DG P + + C HR PL ++
Sbjct: 6 RNQWYVAAYSHEVGRELLGRTVLGEPLVLYRAEEDGGPVVLHDRCVHRRYPLSEAPTRLD 65
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
RI C YHG+ Y T G C +P + R ++ S P E++ ++W+W GD P P
Sbjct: 66 GDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVAERDSLVWVWIGD--PALADP 123
Query: 324 CLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------- 362
+P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 124 EAVPRARHLDAPGWVTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGHIGTPEVAETP 180
Query: 363 -TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
T+ +G + + + F ++G+ G D + D+E+ PC+ + ++
Sbjct: 181 ITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIVGRIDRWQ-DIEYHAPCLYVLHSRVAP 239
Query: 413 PGKLEGQNTRQC-ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 471
G L + H + PS K + +S D+A+ V ++L++
Sbjct: 240 TGTLPAPDGGDPEGFHTEITYAITPSGDGKVYDFWAVSRDWATDDAEV--TEFLYKSNRT 297
Query: 472 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
V+ + L L Q+ A L + D G+ R
Sbjct: 298 VVMQDVDALNLLQRTLGGERAGYQELSINIDTGGLAAR 335
>gi|148554606|ref|YP_001262188.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499796|gb|ABQ68050.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 338
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ A ST++ D + P V++R + G + + C HR PL G
Sbjct: 5 IRNLWYVAALSTEIADGPVGRRICSLPVVLYRERSGAVAALFDRCPHRFVPLSRGRCEGD 64
Query: 268 RIQCPYHGWEYSTDGKCEKMP-STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI---- 322
R+ C YHG Y GKC P T R++ ++S P E+ G++WIW GD T+
Sbjct: 65 RLVCGYHGLAYDGAGKCVANPQGTVTRSLDVRSFPVEERHGLVWIWMGDPALRDTVAIPD 124
Query: 323 ------PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P + P G+ M L+ DN++DL+H F H T
Sbjct: 125 FSLLDRPAMRPQYGY-------MWTAAHFELMTDNIMDLSHIEFLHADTLG 168
>gi|37521491|ref|NP_924868.1| oxygenase, Rieske iron-sulfur component [Gloeobacter violaceus PCC
7421]
gi|35212488|dbj|BAC89863.1| gll1922 [Gloeobacter violaceus PCC 7421]
Length = 346
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ VA S +LK + E +FRG DG+ V++ C HR L G V EG +
Sbjct: 16 NCWYAVAQSAELKTEPRSITLWGEAIALFRGADGVAHAVEDRCPHRQVKLSHGRVVEGSL 75
Query: 270 QCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+C YHGW + DG+C +P + L ++++ P E +G +W++ GD + L
Sbjct: 76 ECAYHGWRFDGDGRCTHVPYREGSLPGCRLRTYPVREHDGFVWLFAGDPGRAHAVEPLRL 135
Query: 328 PSGFEIHAEIVMELPI----EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 378
P ++ I PI + L++NL+D+ H H + W L K
Sbjct: 136 PEWDHLNY-IASVAPIACAAHYSYLIENLMDMHHG---HLHERFQAWGAAHLEKL 186
>gi|71735530|ref|YP_274672.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|71556083|gb|AAZ35294.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. phaseolicola 1448A]
Length = 354
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 140/358 (39%), Gaps = 57/358 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ +++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNERMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK + + P + + M+ +F + + R +
Sbjct: 237 AGKGGYHALHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQRK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 525
+ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 294 IFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|237797303|ref|ZP_04585764.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020153|gb|EGI00210.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 354
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 136/337 (40%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E +R ++ V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVTDKPLGRQICNEKMAFYRDQNQQIVAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG +DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 64 LVCGYHGLVMGSDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDK--EKADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK + ++ + P + + M+ +F + + R +
Sbjct: 237 AGKGGYEAPQEFKASSIVVDFITPETDTSIWYFWGMARNFNPADES---LTATIREGQRK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ +EDL ++ QQ+ + + L + D GV+ R
Sbjct: 294 IFSEDLEMLERQQQNLLQHPHRNLLKLNIDAGGVQSR 330
>gi|339328975|ref|YP_004688667.1| vanillate O-demethylase oxygenase subunit [Cupriavidus necator N-1]
gi|338171576|gb|AEI82629.1| vanillate O-demethylase oxygenase subunit [Cupriavidus necator N-1]
Length = 351
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 132/323 (40%), Gaps = 50/323 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVN 265
L N W+ A ST++ + + +I+R +D G P + + C HR PLHLG +
Sbjct: 8 LMNAWYVAALSTEVGPEELFHRKILDVSVMIYRKQDDGTPVAMHDRCPHRFAPLHLGKRH 67
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
+ CPYH + G C P + +K+ P E+ G +WIW GDE P
Sbjct: 68 GDEVSCPYHALRFDCLGTCTHNPHGTGHIPKAASVKTFPLAEKYGFVWIWMGDEAPDLK- 126
Query: 323 PCLLPP-SGFEI-HAEIV----MELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSL 375
LLP S +I HA V M +P+ + L++DN++DL+H H +G P +
Sbjct: 127 --LLPDYSELDIGHANAVGYTYMHMPVNYELIIDNVMDLSHIDHVHGEIITTRGKLSPVI 184
Query: 376 VKFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGISKPG 414
K + W+ P P D+ + PP + ++ G
Sbjct: 185 PKVADVQRTVNARWEWTQSPAMMIFANFLPQPEEEARHYFDITWAPPANIQLSV-----G 239
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
++G+ + + LH P ++ T + + M+ H A +
Sbjct: 240 AVQGEMSFDDYIGQYDLHTTTPETQGSTHYFFATRRNHIVEDGDYNKMKIQAMHGAFE-- 297
Query: 475 NEDLRLVLGQQERMNNGANVWNL 497
NED ++ Q M + AN ++L
Sbjct: 298 NEDGPIISAVQREMGD-ANFFDL 319
>gi|346993484|ref|ZP_08861556.1| Rieske (2Fe-2S) protein [Ruegeria sp. TW15]
Length = 349
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 214 LKNFWFPVAFSTD----LKDDTM--EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ A+S D LK +T E V++R +DG P +++ C HR PL G++
Sbjct: 3 LRNCWYVAAWSKDIGRELKAETYLGENVVLYRQQDGTPVALEDACPHRKLPLSKGNLIGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YHG + GKC P+ + R +KS P ++ ++WIW GD P A
Sbjct: 63 TVECGYHGLTFDCSGKCTDSPTQRGMTPRRAVVKSYPVVDRYRLLWIWMGD-PELANPDL 121
Query: 325 LLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
+ P F+ + VM++ + + DNLLD +H + H S+FA
Sbjct: 122 IFPIENFDNPTWGMTDGGVMDIDCHYLWVCDNLLDPSHVAWVHVSSFA 169
>gi|416016890|ref|ZP_11564127.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. B076]
gi|416026994|ref|ZP_11570325.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. race 4]
gi|416028121|ref|ZP_11571221.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. race 4]
gi|320324098|gb|EFW80180.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. B076]
gi|320327819|gb|EFW83826.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. race 4]
gi|320328655|gb|EFW84655.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. race 4]
Length = 354
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 140/358 (39%), Gaps = 57/358 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ +++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNERMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK + + P + + M+ +F + + R +
Sbjct: 237 AGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQRK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 525
+ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 294 IFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|428775230|ref|YP_007167017.1| Pheophorbide a oxygenase [Halothece sp. PCC 7418]
gi|428689509|gb|AFZ42803.1| Pheophorbide a oxygenase [Halothece sp. PCC 7418]
Length = 440
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 39/287 (13%)
Query: 250 NTCAHRACPLHLGSVN--EGRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKS 299
+ C HR PL G V+ G ++C YHGW++ +G C K+P + ++ +
Sbjct: 51 DRCPHRLAPLSEGRVDPKTGHLECCYHGWQFDENGTCTKIPQAENAELLERNCEQLRATA 110
Query: 300 LPCFEQEGMIWIWPGDEPP--TATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNL 352
LP + W+WP + A P L P GF + + V +LP + L++N+
Sbjct: 111 LPTCVANDLFWVWPDPDSAELAAKTPLSLSPKIDNSKGF-LWSSYVRDLPYDWQTLVENI 169
Query: 353 LDLAHAPFTHTSTFAKGWS---VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 409
D +H PF H S +P ++ TP + +P M F PPC + I
Sbjct: 170 ADPSHVPFAHHGVQGSRESATPIPMEIREATPERIVAQIDRNFPSTMTFEPPCRLEYAIQ 229
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRH- 468
+ K G T C+P++ K+R++ + + +FA L+ W H
Sbjct: 230 LGSEEKQIGLIT-----------YCIPTAPGKSRIVAQFARNFA--LRAKDLTPRWWEHI 276
Query: 469 -FAEQVLNEDLRLVLGQQERMNNGAN---VWNLPVGYDKLGVRYRLW 511
VL+ D+ L+ Q+ + + + +P D+ + +R W
Sbjct: 277 RLRHLVLDGDMVLLHCQEAALREEGHWKSAYMMPTNADRFVIAFRKW 323
>gi|390575204|ref|ZP_10255311.1| Rieske (2Fe-2S) iron-sulfur domain containing protein [Burkholderia
terrae BS001]
gi|389933006|gb|EIM95027.1| Rieske (2Fe-2S) iron-sulfur domain containing protein [Burkholderia
terrae BS001]
Length = 357
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ A+ D+ M EP V++R +DG P +++ C HR PL +G +
Sbjct: 3 LRNAWYVAAWDADVTHKLMPVTILGEPVVLYRREDGTPVALEDACPHRKLPLSMGKLIGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPG--DEPPTATIP 323
+++C YHG + +G C + P + K++S P E+ G++WIW G DE ATI
Sbjct: 63 QVECGYHGLTFDCEGACVRAPGSPRIPPGAKVRSYPLAERYGLLWIWMGDADEADAATIV 122
Query: 324 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 381
+ + ++ M + + + DNLLD +H + H S+F +K
Sbjct: 123 QIDEWGDPAWGVNRGDAMTVECHYLYVTDNLLDPSHVAWVHPSSFGNAACEAEPLKTEVA 182
Query: 382 ASGL 385
A G+
Sbjct: 183 AHGV 186
>gi|254430294|ref|ZP_05043997.1| rieske (2Fe-2S) domain protein [Cyanobium sp. PCC 7001]
gi|197624747|gb|EDY37306.1| rieske (2Fe-2S) domain protein [Cyanobium sp. PCC 7001]
Length = 330
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTMEP------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L NFW+ V S+ LKD + ++++R G P + C HR G V
Sbjct: 5 LSNFWYAVEHSSTLKDAPCQATLLNRTYILYRDDTGQPHAAVDQCPHRGASFKAGWVEGS 64
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
++CPYHGW + +G C ++P+ Q ++ +LP E G +WI+PGD P+
Sbjct: 65 CLRCPYHGWSFDAEGHCVRIPADQPGVPIPAQARLHTLPVQESSGFVWIFPGD--PSLAD 122
Query: 323 PCLLPPSGFEIHAEIVMELPIEH------GLLLDNLLDLAHAPFTHTSTF 366
P L+ P+ E+ AE + E+ ++++ LD +HAPF H F
Sbjct: 123 PSLI-PAFPELGAEGWRPVSGEYLWHANFSRVVESGLDTSHAPFVHKPFF 171
>gi|420249650|ref|ZP_14752889.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|398063536|gb|EJL55262.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 357
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ A+ D+ M EP V++R +DG P +++ C HR PL +G +
Sbjct: 3 LRNAWYVAAWDADVTHKLMPVTILGEPVVLYRREDGTPVALEDACPHRKLPLSMGKLIGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPG--DEPPTATIP 323
+++C YHG + +G C + P + K++S P E+ G++WIW G DE ATI
Sbjct: 63 QVECGYHGLTFDCEGACVRAPGSPRIPPGAKVRSYPLAERYGLLWIWMGDADEADAATIV 122
Query: 324 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 381
+ + ++ M + + + DNLLD +H + H S+F +K
Sbjct: 123 QIDEWGDPAWGVNRGDAMTVDCHYLYVTDNLLDPSHVAWVHPSSFGNAACEAEPLKTEVA 182
Query: 382 ASGL 385
A G+
Sbjct: 183 AHGV 186
>gi|399071851|ref|ZP_10750106.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398043032|gb|EJL35974.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 352
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 118/281 (41%), Gaps = 48/281 (17%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LKN W+ +A+S +++ + +P V +R + G + + C+HR PL LG
Sbjct: 3 LKNCWYALAWSHEVQGAGLLARKVIGQPLVAYRTEGGEAAVLIDRCSHRFAPLSLGRREG 62
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YHG + T G C P + N+ I+S P E+ +IW+W G+ P+ P
Sbjct: 63 DTLRCMYHGLVFDTQGACVLEPGRKRPSPNMAIRSYPVVERYKLIWVWMGE--PSLADPD 120
Query: 325 LLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV----- 372
L+P P+ I A I ++ L++DNLLD +H F H +T ++
Sbjct: 121 LVPDCHWQDDPAWRSIPAYI--HYKADYRLIMDNLLDFSHLSFVHENTLGGSLAIAETAP 178
Query: 373 ------------------PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP- 413
P L +L + +QG D + I E+ P VL+ S P
Sbjct: 179 LIEQIDKTVRITRWYRNEPDLAPYLKGVAEIQGPIDRWNI-YEWHMPGNVLNMDSGSAPA 237
Query: 414 --GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 452
G EG + A H + P K + + +F
Sbjct: 238 GTGAPEGHRVPE-ALQFHATQIVTPEDGKNSHFFWSYGHNF 277
>gi|420251385|ref|ZP_14754562.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|398057977|gb|EJL49901.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 349
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 130/320 (40%), Gaps = 56/320 (17%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ A+S D+ D EP +++R DG P + + C HR PL +G
Sbjct: 4 LRNTWYAAAWSRDVGADLSTRELLGEPMLLYRKHDGAPVAMIDRCPHRFAPLSMGKRVGD 63
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT--- 321
I+C YHG ++ G C K P R +++S P ++ G++WIW G EP A
Sbjct: 64 GIECGYHGLQFDCSGACSKNPHGDGRIPPGARVRSFPAEDRHGLVWIWAG-EPSRANASL 122
Query: 322 IP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLA-----HAPFTHTSTFAK----- 368
IP L+ P + E+ + E L++DNL+DL+ HAP+ F +
Sbjct: 123 IPDFSHLVSPRLKTVGDEMTQKAHYE--LVVDNLMDLSHVNYLHAPYQQVDDFLQAKHDV 180
Query: 369 --------------GWSVP-SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
G P S FL YW +++ + P L G+
Sbjct: 181 VQDGSALESRRTVTGTRAPQSFRPFLDDPDAPVDYW----LNIRWHAPGCCLLETGVVPV 236
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMS----LDFASVLKHVPFMQYLWRHF 469
G+ + T H+ P T+ LY S LD Q + H
Sbjct: 237 GRPREHGLVRIGT-----HIVTPIGAASTQYLYASSRNYRLDDPDADDETARWQQMGFHE 291
Query: 470 AEQVLNEDLRLVLGQQERMN 489
++ + E ++ +G++E ++
Sbjct: 292 QDKPMIEGVQTRMGERELLS 311
>gi|428777231|ref|YP_007169018.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Halothece
sp. PCC 7418]
gi|428691510|gb|AFZ44804.1| Rieske (2Fe-2S) iron-sulfur domain protein [Halothece sp. PCC 7418]
Length = 340
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 21/196 (10%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ VA S+++ D +P V++R DG +++ C HR L G + R+
Sbjct: 13 NHWYVVARSSEVTTDPYAVTLWKQPIVLYRQSDGQVCALEDRCPHRFVRLSEGKLQRDRV 72
Query: 270 QCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+C YHGW+++ +GKC +P +L +++ P E +G IW++ GDE TAT+P
Sbjct: 73 ECAYHGWQFNAEGKCVSIPYLTEKQKLPPCQLRVYPVQEGDGFIWVFLGDE--TATVPRF 130
Query: 326 LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
P I V+E + L++NL+D+ H H + W+ L
Sbjct: 131 QVPEWDHLNYIATVSVIETQAHYSYLIENLMDMYHG---HLHEDWQAWTDAKLENIEEDD 187
Query: 383 SGLQGYWDP---YPID 395
S + GY++ Y ID
Sbjct: 188 SQVHGYYNAQSYYRID 203
>gi|359400756|ref|ZP_09193733.1| hypothetical protein NSU_3419 [Novosphingobium pentaromativorans
US6-1]
gi|357597795|gb|EHJ59536.1| hypothetical protein NSU_3419 [Novosphingobium pentaromativorans
US6-1]
Length = 332
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 89/161 (55%), Gaps = 16/161 (9%)
Query: 221 VAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPY 273
A+S++L + M EP V++R DG C+++ C HR PL LG + ++C Y
Sbjct: 2 AAWSSELVGEAMMPREVLGEPIVLYRAADGSIVCMEDRCCHRLAPLSLGERDGDAVRCLY 61
Query: 274 HGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS-- 329
HG++++ DG C ++P + R+ +++ P E+ G IW+W GD P A + L+PP+
Sbjct: 62 HGFKFARDGACVEIPGQKTIPRSACVQTYPATEKGGWIWVWMGD-PARANLD-LVPPAIG 119
Query: 330 -GFE--IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
G E + + ++ ++ L+ DNL D +H + H ++F
Sbjct: 120 PGDEGWLTDQSHLDYDADYQLINDNLTDFSHLSYVHRNSFG 160
>gi|398385455|ref|ZP_10543476.1| ring-hydroxylating dioxygenase, large terminal subunit [Sphingobium
sp. AP49]
gi|397720406|gb|EJK80963.1| ring-hydroxylating dioxygenase, large terminal subunit [Sphingobium
sp. AP49]
Length = 355
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 115/278 (41%), Gaps = 45/278 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L + W+ + +L+ + +P V+FR + G +++ C HRA PL G V
Sbjct: 14 LHDIWYVAGWGHELQPGSRTSRTILGQPLVLFRTEGGEVSALEDRCCHRAMPLSEGVVIG 73
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
I+CPYHG E+ TDG C +P+ R +++ P E++ ++WIW GD
Sbjct: 74 ESIRCPYHGLEFGTDGACVHIPAQDKIPRTARVRHFPLVEKDALLWIWMGDADKADI--A 131
Query: 325 LLPPSGFEIHAEIVMELPIEH-------GLLLDNLLDLAHAPFTHTSTFAKG----WSVP 373
++P + H + H LL+DNL+DL+H P+ H ST + P
Sbjct: 132 IIPDHPY--HQDPAWAWRSAHYDVQGNWQLLVDNLMDLSHLPYIHPSTIGGDPELHFKTP 189
Query: 374 SLVKFL-------------------TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 414
++ L A+G +G D + ++EF+P + + T G G
Sbjct: 190 TISTRLPNGVRVERKMPSSVPPPTYVAAAGFKGLVDRWQ-EIEFQPVFIRIHT-GACDEG 247
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 452
R + H P + T + M+ +
Sbjct: 248 TGAYDGDRSHGLSMLGFHGITPETETTTHYFWSMATNI 285
>gi|302555436|ref|ZP_07307778.1| alpha-subunit oxygenase [Streptomyces viridochromogenes DSM 40736]
gi|302473054|gb|EFL36147.1| alpha-subunit oxygenase [Streptomyces viridochromogenes DSM 40736]
Length = 356
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 53/285 (18%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLG--SVN 265
+N W+ A+S ++ + + E V++R ++G P + + C HR PL ++
Sbjct: 9 RNQWYVAAYSHEVGRELLGRTILGETLVLYRTAEEGTPVVLHDRCVHRRYPLSEAPTRLD 68
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P
Sbjct: 69 GDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVVEQDSLIWVWIGD-------P 121
Query: 324 CLLPPSGFE----------IHAEIVMELPIEHGLLLDNLLDLAHAPFTH----------- 362
L P G + + + ++GLL+DNLLDL+H + H
Sbjct: 122 ALADPQGIPRARHLDSPGWVTVRGMEPIDCDYGLLVDNLLDLSHETYLHGGYIGTPEVAE 181
Query: 363 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 410
T+ +G + + + F ++G++G + D+E+ PC+ L I
Sbjct: 182 TPITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSRI 240
Query: 411 SKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 454
+ G L E + H + PS + + +S D+A+
Sbjct: 241 APAGVLPEADGSDPNGFHTEITYAITPSGDGEVYDFWAVSRDWAT 285
>gi|407695328|ref|YP_006820116.1| oxidoreductase subunit alpha [Alcanivorax dieselolei B5]
gi|407252666|gb|AFT69773.1| Oxidoreductase subunit alpha [Alcanivorax dieselolei B5]
Length = 351
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 39/276 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMEPW------VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+ +S ++ + ME W V +R +DG + C HR PL G V R
Sbjct: 12 RNQWYVAGWSDEVSREPMERWLLNEPVVFYRREDGAIVALHGRCPHRQFPLAKGRVVGDR 71
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEP-------PT 319
++C YHG+ + G C ++P+ ++ + +I + P E+ WIW GD P
Sbjct: 72 LECGYHGFTFDQSGACTRIPTQEVIPSSCRIDAYPVVERWNWFWIWMGDPDKADESLIPD 131
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA------KGWSVP 373
I L P + A + L H L+ +NL DL+H F H G+ V
Sbjct: 132 HDIVKLTDPDWLPVKAATHL-LKARHQLMHENLCDLSHLTFLHPGIIGVDAVADTGFDVS 190
Query: 374 SLVKFLTPASGL-----QGYWDPY-----PID----MEFRPPCMVLSTIGISKPGKLEGQ 419
+ A + G++ PID MEF PC+ L+ K +G+
Sbjct: 191 GEGMWYRDARAMYNQAPTGFFSDILDYHEPIDRLMSMEFYLPCLHLAEEVFLAHDKKDGE 250
Query: 420 NTRQCATH-LHQLHVCLPSSRKKTRLLYRMSLDFAS 454
R+ T+ +H H P++ +T S +FA+
Sbjct: 251 PGRELGTYKVH--HAVTPATDHETHYFVAYSRNFAT 284
>gi|399078102|ref|ZP_10752702.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398034040|gb|EJL27317.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 362
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 103/239 (43%), Gaps = 44/239 (18%)
Query: 183 STSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTD----LKDDTM--EPWV 236
S S++ +D + R ++G P+ T N W+ FS + L+ T+ P V
Sbjct: 3 SVSQKMIDASQ----RAQKRLAGRDTPFVT---NCWYVAGFSWEFSRALRARTILGRPLV 55
Query: 237 IFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RN 294
++R P + + C HR+ PL +++ I C YHG Y DG+C + P+ Q R
Sbjct: 56 LYRTAADRPVALSDRCVHRSYPLSASTLDGDTIVCGYHGLRYDADGQCVEAPALQTCPRG 115
Query: 295 VKIKSLPCFEQEGMIWIWPGDEPPTATIPC-------LLPPSGFEIHAEIVMELPIEHGL 347
V ++S P EQ ++WIW G+ P +P P S H LP +
Sbjct: 116 VGVRSYPVREQGPLVWIWMGEAPADEALPIGDWVSDPAWPASQQSYH------LPASYIA 169
Query: 348 LLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLS 406
L +NLLDL H F H ++F P PY +D+E P VL+
Sbjct: 170 LHENLLDLTHLSFLHANSFG----TPDFAS------------APYEVDLESTPGRFVLT 212
>gi|325929238|ref|ZP_08190374.1| vanillate demethylase subunit A [Xanthomonas perforans 91-118]
gi|325540377|gb|EGD11983.1| vanillate demethylase subunit A [Xanthomonas perforans 91-118]
Length = 358
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 130/317 (41%), Gaps = 54/317 (17%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGTVVALEDACWHRLVPLSMGKLRGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 367
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFD 183
Query: 368 -----KGWSVPSLVKFLTP----ASGL------QGYWDPYPIDMEFRPPCMVLSTIGISK 412
+G V ++ + P AS + +G D + I + F P + +G++
Sbjct: 184 VVHGDRGVIVSRWMRNIDPPPFWASQIARHLDYRGKVDRWQI-IRFEAPSTIAIDVGVAI 242
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
G + R + + L+ P + + ++A H + L R
Sbjct: 243 AGTGAPEGDRSQGVNGYVLNTITPETDTTCHYFWAFMRNYA---LHDQSLTTLTRDGVTG 299
Query: 473 VLNEDLRLVLGQQERMN 489
V ED ++ QQ ++
Sbjct: 300 VFGEDEAVLEAQQRAID 316
>gi|294667229|ref|ZP_06732450.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292603010|gb|EFF46440.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 358
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 127/315 (40%), Gaps = 55/315 (17%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDMVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 367
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFE 183
Query: 368 -----KGWSVPSLVKFLTP----------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
+ V ++ + P G G D + I + F P + +G++
Sbjct: 184 VVHGDRSVIVSRWMRNIEPPPFWASQMALHRGYHGKVDRWQI-IHFEAPGTIAIDVGVAI 242
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
G + R + + L+ P + + + ++A H M R+
Sbjct: 243 TGTGAPEGDRSQGVNAYVLNTVTPETDRTCHYFWAFMRNYA---LHDQSMTTTTRNAIAG 299
Query: 473 VLNEDLRLVLGQQER 487
+ ED +VL Q+R
Sbjct: 300 IFGED-EVVLEAQQR 313
>gi|300864498|ref|ZP_07109363.1| Rieske (2Fe-2S) region [Oscillatoria sp. PCC 6506]
gi|300337508|emb|CBN54511.1| Rieske (2Fe-2S) region [Oscillatoria sp. PCC 6506]
Length = 350
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 19/196 (9%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
NFW+ VA S ++K + +P VI+R +++ C HR L G V +
Sbjct: 21 NFWYVVARSNEVKTQPIAVILWNQPIVIYRDNTEEIRALEDRCPHRQVKLSHGQVKGDLL 80
Query: 270 QCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+C YHGW ++ G+C ++ + +L + KI+S P EQ+G IW++PGDE + L
Sbjct: 81 ECAYHGWRFNASGECAEVDYLADNQKLPSCKIRSFPVKEQDGFIWLFPGDETKAEQVSLL 140
Query: 326 LPPSGFEIH---AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
P I+ V+ + L++NL+D+ H H + W+ P L A
Sbjct: 141 GLPEWEHINYIATVSVINCQAHYSFLIENLMDMYHG---HLHQDWQAWAEPVLQDLDEDA 197
Query: 383 SGLQGYWDP---YPID 395
+ ++ Y ID
Sbjct: 198 DRVDAHYQAQSYYKID 213
>gi|221235412|ref|YP_002517849.1| vanillate demethylase oxygenase subunit A vanA [Caulobacter
crescentus NA1000]
gi|220964585|gb|ACL95941.1| vanillate demethylase oxygenase subunit A vanA [Caulobacter
crescentus NA1000]
Length = 358
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 119/305 (39%), Gaps = 34/305 (11%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 295
V RGKD P +++ C HR PL LG V +G + C YHG +G+ MP ++
Sbjct: 41 VFHRGKDDRPVALEDFCPHRGAPLSLGFVRDGELVCGYHGLTMGCEGRATAMPGQRVAAF 100
Query: 296 -KIKSLPCFEQEGMIWIWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 351
I++ P E+ G IW+WPGD P P S + + + ++ L++DN
Sbjct: 101 PAIRAFPVLERYGFIWVWPGDPAQADPAKLHPLFWADSPDWAYGGGLYHIACDYRLMVDN 160
Query: 352 LLDLAHAPFTH------------------------TSTFAKGWSVPSLVKFLTPASGL-- 385
L+DL H + H TS F +G P + +GL
Sbjct: 161 LMDLTHETYVHATSIGQKEIDEAPVTTRLEGEEVVTSRFMEGIHAPPFWRMALRGAGLPE 220
Query: 386 QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLL 445
D + I F P V+ +G++ G + P +
Sbjct: 221 NALVDRWQI-CRFSLPSHVMIEVGVALAGHGGYHAPADKKVSSVVVDFITPETETSHHYF 279
Query: 446 YRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLG 505
+ M+ FA + + R ++ +EDL ++ QQ+ + + L + D G
Sbjct: 280 WGMARSFA--VGDAALTDTI-REGQGKIFSEDLEMLERQQKNLLAYPDRKLLKLNIDAGG 336
Query: 506 VRYRL 510
VR R+
Sbjct: 337 VRSRM 341
>gi|78045933|ref|YP_362108.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|78034363|emb|CAJ22008.1| putative vanillate O-demethylase oxygenase subunit [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 358
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 130/317 (41%), Gaps = 54/317 (17%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 367
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFD 183
Query: 368 -----KGWSVPSLVKFLTP----ASGL------QGYWDPYPIDMEFRPPCMVLSTIGISK 412
+G V ++ + P AS + +G D + I + F P + +G++
Sbjct: 184 VVHGDRGVIVSRWMRNIDPPPFWASQIARHLDYRGKVDRWQI-IRFEAPSTIAIDVGVAI 242
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
G + R + + L+ P + + ++A H + L R
Sbjct: 243 AGTGAPEGDRSQGVNGYVLNTITPETDTTCHYFWAFMRNYA---LHDQSLTTLTRDGVTG 299
Query: 473 VLNEDLRLVLGQQERMN 489
V ED ++ QQ ++
Sbjct: 300 VFGEDEAVLEAQQRAID 316
>gi|383788948|ref|YP_005473517.1| putative oxidoreductase [Caldisericum exile AZM16c01]
gi|381364585|dbj|BAL81414.1| putative oxidoreductase [Caldisericum exile AZM16c01]
Length = 322
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ V S +LKD + E V++R KDGI C+ + CAHR L G +
Sbjct: 2 IKNQWYIVLSSKELKDKPIGLKRFGEKLVMWRTKDGI-ACIADKCAHRGASLSKGKIVNN 60
Query: 268 RIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPT-AT 321
IQCP+HG+EY + G+ +P S N K+KS E+ G I+++ GDE
Sbjct: 61 HIQCPFHGFEYDSSGRVVLIPANGKASKVPDNFKVKSYKVKEKNGFIFLFYGDESKAPGE 120
Query: 322 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
IP G + E+ + ++N LD H PF H +T G
Sbjct: 121 IPFFDWIDGSFTYDELNEPWNTHYSRCIENQLDPIHLPFVHHNTIGIG 168
>gi|428224503|ref|YP_007108600.1| Pheophorbide a oxygenase [Geitlerinema sp. PCC 7407]
gi|427984404|gb|AFY65548.1| Pheophorbide a oxygenase [Geitlerinema sp. PCC 7407]
Length = 440
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 140/340 (41%), Gaps = 57/340 (16%)
Query: 218 WFPVAFSTDLKDDTMEPWVIF---------RGKDGIPGCVQNTCAHRACPLHLGSVNE-- 266
W+PV+ DL + P V+ R D + + C HR PL G V+E
Sbjct: 12 WYPVSPLEDLDPECPTPVVVLGKRIVIWKPRFSDHYRAFL-DQCPHRLAPLSEGRVDEKT 70
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK--------SLPCFEQEGMIWIWPGDEPP 318
G + C YHGW++ G C ++P + + K +LP G++W+WP +
Sbjct: 71 GHLMCSYHGWQFDEQGTCTQIPQAEDSELVAKNRDRYCVTALPMQAVNGLLWVWPDPDSA 130
Query: 319 TATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWS 371
LP S + + A IV +L + L++NL D +H PF H + +
Sbjct: 131 HLASAQALPLSPYWNAGSEFVWASIVRDLEYDWQTLVENLADPSHVPFAHHGVQGRRERA 190
Query: 372 VPSLVKFLTPA-----SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCAT 426
P+ +K + + +G + + F PPC + I + RQ
Sbjct: 191 QPTPIKIVESTQDRIEAKSEG---SFTTKITFTPPCHLEYAISLG--------GDRQVGL 239
Query: 427 HLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA--EQVLNEDLRLV--- 481
+ C+P + K+R++ + S +FA L + W H + +L+ D+ L+
Sbjct: 240 ----VTYCVPVAPGKSRIVAQFSRNFAKRLHQI--TPRWWDHISVRNSILDGDMILLHYQ 293
Query: 482 ---LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
L Q+ + + + +P D+L + +R W D +G
Sbjct: 294 EKELQQRSQTEDWKTAYKMPTSADRLVIEFRRWIDQYCQG 333
>gi|262371405|ref|ZP_06064722.1| vanillate O-demethylase oxygenase subunit [Acinetobacter johnsonii
SH046]
gi|262313627|gb|EEY94677.1| vanillate O-demethylase oxygenase subunit [Acinetobacter johnsonii
SH046]
Length = 358
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ DL+D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IRNAWYVACRPEDLQDKPLGRTICGEKIVFYRGKENTVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG +GK MP+ ++ K+ E+ G +W+WPG++ LL
Sbjct: 63 NLVCGYHGLVMGCEGKAVAMPAQRINGFPCNKAYAVVEKFGFVWVWPGEK--NLADESLL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PVLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|16126632|ref|NP_421196.1| vanillate O-demethylase oxygenase [Caulobacter crescentus CB15]
gi|13423928|gb|AAK24364.1| vanillate O-demethylase oxygenase, subunit A [Caulobacter
crescentus CB15]
Length = 353
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 119/305 (39%), Gaps = 34/305 (11%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 295
V RGKD P +++ C HR PL LG V +G + C YHG +G+ MP ++
Sbjct: 36 VFHRGKDDRPVALEDFCPHRGAPLSLGFVRDGELVCGYHGLTMGCEGRATAMPGQRVAAF 95
Query: 296 -KIKSLPCFEQEGMIWIWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 351
I++ P E+ G IW+WPGD P P S + + + ++ L++DN
Sbjct: 96 PAIRAFPVLERYGFIWVWPGDPAQADPAKLHPLFWADSPDWAYGGGLYHIACDYRLMVDN 155
Query: 352 LLDLAHAPFTH------------------------TSTFAKGWSVPSLVKFLTPASGL-- 385
L+DL H + H TS F +G P + +GL
Sbjct: 156 LMDLTHETYVHATSIGQKEIDEAPVTTRLEGEEVVTSRFMEGIHAPPFWRMALRGAGLPE 215
Query: 386 QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLL 445
D + I F P V+ +G++ G + P +
Sbjct: 216 NALVDRWQI-CRFSLPSHVMIEVGVALAGHGGYHAPADKKVSSVVVDFITPETETSHHYF 274
Query: 446 YRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLG 505
+ M+ FA + + R ++ +EDL ++ QQ+ + + L + D G
Sbjct: 275 WGMARSFA--VGDAALTDTI-REGQGKIFSEDLEMLERQQKNLLAYPDRKLLKLNIDAGG 331
Query: 506 VRYRL 510
VR R+
Sbjct: 332 VRSRM 336
>gi|148239148|ref|YP_001224535.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 7803]
gi|147847687|emb|CAK23238.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 7803]
Length = 440
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 128/319 (40%), Gaps = 63/319 (19%)
Query: 218 WFPVAFSTDLKDDTMEPWVIFR--------GKDGIPGCVQNTCAHRACPLHLGSVN-EGR 268
W+PVA+ DL + + + G + C HR PL G +N G
Sbjct: 9 WWPVAYLRDLDPKRPQRFTVLERDLVLWWDASIGSWRAFDDVCPHRLVPLSEGRINASGE 68
Query: 269 IQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPT--- 319
++CPYHGW + +G+C ++P + R SLP +G++++W GD PT
Sbjct: 69 LECPYHGWSFDGEGRCTRIPQMAEGANASGRRSSCNSLPTCSGQGLLFVWTGD--PTMAG 126
Query: 320 ATIPCLLP-----PSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 371
A P L+P G+ I + +LP++ LL+N+LD++H PFTH T +
Sbjct: 127 AKDPPLVPLLQEQGDGWADGWIVQDTFRDLPMDALTLLENVLDVSHVPFTHHKTVGNREN 186
Query: 372 VPSLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL- 428
++ + SG + +W+ P + G+L Q T A L
Sbjct: 187 AAPVLAVIRAENDSGFEAFWEEGP------------------RRGRLGSQFTHFSAPQLM 228
Query: 429 -HQLHV-----------CLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVL 474
H L +P R + RL R F S L V +H +
Sbjct: 229 WHDLDAKGFARILTVVYAVPIRRGECRLFARFPFQFKSALPRLLVGLRPRWLQHIGNHKV 288
Query: 475 NEDLRLVLGQQERMNNGAN 493
ED ++ L QER+ A
Sbjct: 289 LEDDQVFLHWQERVLESAG 307
>gi|2765429|emb|CAA75050.1| vanillate demethylase A [Pseudomonas putida]
Length = 353
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 42/310 (13%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+ ++ D + E V +RG + V++ C RA PL LG V G
Sbjct: 4 RNTWYVACTPDEIADKPLGRQICGEKIVFYRGHENRVAAVEDFCRTRA-PLSLGYVENGN 62
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+P
Sbjct: 63 LVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--AQADPSLIP 120
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------------- 369
+ ++ + + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 HLEWAVNDDWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPYHRHRR 180
Query: 370 --WSVPSLVKFLTP-----ASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLEG 418
S + + P A G D P++ F PP VL +G++ GK
Sbjct: 181 EVLSARHMENIMAPPFWRMALRGNGLADDVPVERWQICRFTPPSHVLIEVGVAHAGKGGY 240
Query: 419 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 478
+ A+ + + P + + ++ +FA+ + + R ++ +EDL
Sbjct: 241 HAEQHKASSIVVWNFITPETDTSIWYFWVLACNFAAQDQALTANI---REGQGKIFSEDL 297
Query: 479 RLVLGQQERM 488
++ QQ+ +
Sbjct: 298 EMLERQQQNL 307
>gi|167645029|ref|YP_001682692.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter sp. K31]
gi|167347459|gb|ABZ70194.1| Rieske (2Fe-2S) domain protein [Caulobacter sp. K31]
Length = 387
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 86/189 (45%), Gaps = 52/189 (27%)
Query: 216 NFWFPVAFSTDLKDDTME-------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN--- 265
+ W+ A S DLK ME P +I R + G +++ C HRA L G V+
Sbjct: 35 DTWYMAALSPDLKPGKMEGREFLGEPVLIGRTRAGAVYALRDVCPHRAAKLSAGKVHAEA 94
Query: 266 --------EGR---IQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGM 308
GR ++CPYHGW + TDG C K+PS + V++K+ P E +G+
Sbjct: 95 PNGENRGENGRRETVECPYHGWRFHTDGACAKIPSLTAADPLDVSKVRVKTYPLVESQGL 154
Query: 309 IWIW----------PGDEPPT-----ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 353
+WIW P + PPT P L+ ++IH I+H +L L+
Sbjct: 155 VWIWMSADPRFDGQPSEPPPTIPGVVGGKPKLVDHLDYDIH--------IDHAVL--GLI 204
Query: 354 DLAHAPFTH 362
D AH PF H
Sbjct: 205 DPAHGPFVH 213
>gi|425899118|ref|ZP_18875709.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397890090|gb|EJL06572.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 353
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 98/241 (40%), Gaps = 45/241 (18%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEKMVFYRGLEGRVAAVEDFCPHRGAPLALGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEP---PTATIPC 324
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P
Sbjct: 64 LVCGYHGLVMGCDGKTVAMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQALADPAQIHHL 123
Query: 325 LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 124 EWAVSDEWAYGGGLFHIACDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPVTT 178
Query: 385 LQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISKPG 414
++G +W D P+D F PP VL +G++ G
Sbjct: 179 VEGDEVVTARHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 K 415
+
Sbjct: 239 Q 239
>gi|285019794|ref|YP_003377505.1| vanillate o-demethylase oxygenase subunit protein [Xanthomonas
albilineans GPE PC73]
gi|283475012|emb|CBA17511.1| probable vanillate o-demethylase oxygenase subunit protein
[Xanthomonas albilineans GPE PC73]
Length = 358
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 110/278 (39%), Gaps = 43/278 (15%)
Query: 208 QPYNTRLKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHL 261
QP N W+ +A+ ++K + V++R G +++ C HR PL +
Sbjct: 3 QPIPAFPLNAWYAIAWDHEVKHALLARKICNLEIVLYRTSSGHVAALEDACWHRLVPLSM 62
Query: 262 GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPT 319
G + + C YHG Y +G+C MPS N ++ P E+ +W+WPGD
Sbjct: 63 GRLRGDDVVCGYHGLAYDANGRCVHMPSQDTINPAACVRRFPTVERHRYVWVWPGD--AA 120
Query: 320 ATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG---- 369
P L+P G+ + + ++ L+LDNL+DL H F H S+ +
Sbjct: 121 LADPALVPDLHWNDDPGWAGDGRTIA-IKCDYRLVLDNLMDLTHETFVHGSSIGQDEVAE 179
Query: 370 ----------------WSV-----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTI 408
W + P L A G +G D + I + F PC + +
Sbjct: 180 APFDVVHGERSVVVSRWMLEIDPPPFWAWQLEHAHGYRGKVDRWQI-IRFEAPCTIAIDV 238
Query: 409 GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 446
G++ G Q R + + L+ P + + +
Sbjct: 239 GVAVAGSGAPQGDRSRGVNGYVLNTVTPETERSCHYFW 276
>gi|254461027|ref|ZP_05074443.1| vanillate O-demethylase oxygenase subunit [Rhodobacterales
bacterium HTCC2083]
gi|206677616|gb|EDZ42103.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium HTCC2083]
Length = 355
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 214 LKNFWFPVAFSTDLKDD------TMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ +S D +D T + V+FR DG +++ C HR PL G
Sbjct: 4 VRNAWYVAGWSKDFGEDLRAITITEQNLVMFRSTDGQIVALEDRCPHRLLPLSKGKRIGD 63
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QC YHG + TDGKC ++P + +++ P E G++WIWPG+ A P
Sbjct: 64 TVQCGYHGMTFGTDGKCVRVPGQDNLPASAYVETFPVHEAHGIVWIWPGEAALAADTPVF 123
Query: 326 LPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 371
P + H + L + + +NL+D AH F H +T S
Sbjct: 124 DLPEFSDPNWHAHHGDGLHLNANYLNVAENLVDPAHVSFVHPTTLGSAAS 173
>gi|312960145|ref|ZP_07774657.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
gi|311285639|gb|EFQ64208.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
Length = 357
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 212 TRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
+ L N W+ ++ +L M +P V FR G+ + + C HR PLH G V
Sbjct: 2 SYLLNTWYIAGWADELAQGGMLGRTIVEQPIVFFRDSHGVIQALADRCPHRFAPLHRGKV 61
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK---IKSLPCFEQEGMIWIWPGDE--PPT 319
+QCPYHG + G+C P + K ++ E+ G IW+WPGD
Sbjct: 62 VGDSVQCPYHGLRFDGSGQCTHNPHGEGNIPKAACVRGFAAVERHGAIWVWPGDRHLASD 121
Query: 320 ATIPCLLPPSGFE---IHAEIVMELPI--EHGLLLDNLLDLAHAPFTHTSTFAKG 369
A IP S FE HA+ LP + LL DN++DL+H F H T G
Sbjct: 122 ALIPDF---SFFEQAPTHAKGHGYLPTRAHYELLSDNIMDLSHVDFLHPDTLGGG 173
>gi|124266197|ref|YP_001020201.1| vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
gi|124258972|gb|ABM93966.1| putative vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
Length = 353
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 114/272 (41%), Gaps = 46/272 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L N W+ A ST++ + +I+R +DG + + C HR PLHLG
Sbjct: 12 LTNAWYVAALSTEVGAQALFHRKILDTSILIYRKQDGTAVALHDRCPHRFAPLHLGKRIG 71
Query: 267 GRIQCPYHGWEYSTDGKCEKMP--STQL-RNVKIKSLPCFEQEGMIWIWPG-DEPPTATI 322
+ C YH ++ G+C K P + Q+ + K++S P E+ G +WIW G D P A +
Sbjct: 72 DEVACLYHALQFDCTGQCTKNPHGNGQIPKAAKVRSFPLEERYGFLWIWMGEDAPDLARL 131
Query: 323 PCL-----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 376
P P +G A M + + L++DN++DL+H H +G P +
Sbjct: 132 PDFGELDKGPDTGV---AFTYMHMKANYELIIDNVMDLSHVDHVHGEIITTRGQLSPQIP 188
Query: 377 KFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGISK-PG 414
K + W+ P P I++ + PP + ++G ++ G
Sbjct: 189 KLREGTESVAARWEWQQTPPLLILADFLPEPKTQARHFIEVSWSPPANIQLSVGATQNDG 248
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 446
L+ N C + LH C P + T +
Sbjct: 249 ALDLVN---CIGQ-YDLHTCTPETANTTHYFF 276
>gi|393770172|ref|ZP_10358677.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium sp.
GXF4]
gi|392724326|gb|EIZ81686.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium sp.
GXF4]
Length = 362
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 143/365 (39%), Gaps = 49/365 (13%)
Query: 195 KLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGC 247
LPR + + + + L N W+ V S L + E V+ R DG P
Sbjct: 7 SLPRPAEDAALDPEAMRQPLGNAWYCVGQSRSLGRTGLRAVELNGEQIVLGRAPDGTPFA 66
Query: 248 VQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLP 301
+++ C HR L G + + CP+HGW + TDG+C +P+ ++++ P
Sbjct: 67 LRDRCPHRGMALSKGRFDGDTLMCPFHGWRFGTDGRCRDVPTLSEHDAADFSRIQVQRFP 126
Query: 302 CFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAP 359
E G +W+ P P + +P +P FE +V+EL +E + L +L+D H
Sbjct: 127 VRESAGFLWVNPHLGPASGAVPA-VPELDFEPAGSLVVELVVEASYDLTTLSLVDPGHVA 185
Query: 360 FTHTS-TFAKGWSVPSLVKFLTP--------------ASGLQGYWDPYP-IDMEFRPPCM 403
F H S F + VK P +S + P +++EFR P M
Sbjct: 186 FVHDSWWFRPSKQLREKVKTFQPVPHGFVMTSHATTTSSPVYRLLGGVPEVEIEFRLPGM 245
Query: 404 VLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQ 463
L I R A + P + +T L + ++ P +
Sbjct: 246 RLERI-------------RAGAKRVANYTFATPLTPDRTLLTNALYWSMPALNLLKPVAR 292
Query: 464 YLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLP 523
L R F L +D +++ Q+ ++ + G +RL R+ALE P
Sbjct: 293 PLMRQF----LTQDQQVLQHAQDGLDRKPTMVLFGQGDLPSQWYFRLKREALESARAGRP 348
Query: 524 FMKPM 528
F+ P+
Sbjct: 349 FVNPL 353
>gi|390441204|ref|ZP_10229357.1| Rieske 2Fe-2S family protein [Microcystis sp. T1-4]
gi|422301550|ref|ZP_16388917.1| Rieske 2Fe-2S family protein [Microcystis aeruginosa PCC 9806]
gi|389789389|emb|CCI14550.1| Rieske 2Fe-2S family protein [Microcystis aeruginosa PCC 9806]
gi|389835488|emb|CCI33483.1| Rieske 2Fe-2S family protein [Microcystis sp. T1-4]
Length = 349
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 154/359 (42%), Gaps = 67/359 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L++FW+ + LK + EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 267 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 316
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 317 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
PP TI L P ++ I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINQENLPPVPTISAFGKLTP---KVAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 368 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 427
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRQFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 428 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 469
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRHLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 470 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|347529646|ref|YP_004836394.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345138328|dbj|BAK67937.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 350
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 18/173 (10%)
Query: 212 TRLKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
T ++N W+ ++ DLK DT E VI+R G +++ C HR PL LG
Sbjct: 2 TYVRNAWYVAGWAQDLKADTPFAITILGERIVIWRTASGAIHALEDRCVHRLAPLSLGRC 61
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
R++C YHG + DG+ +MP Q R +++ P + +W+W GD P
Sbjct: 62 EGERLRCMYHGLLFDPDGRVVEMPG-QDRIPPQARVRHYPVVARHSWLWVWMGD--PARA 118
Query: 322 IPCLLPPSGFEIHAEIV-----MELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
L+PP+ H + + ++ E L+ DNLLD +H F H ++F G
Sbjct: 119 DESLIPPAVGLDHPDYILGHGQLDYAAEARLINDNLLDFSHLTFVHANSFGSG 171
>gi|414172135|ref|ZP_11427046.1| hypothetical protein HMPREF9695_00692 [Afipia broomeae ATCC 49717]
gi|410893810|gb|EKS41600.1| hypothetical protein HMPREF9695_00692 [Afipia broomeae ATCC 49717]
Length = 343
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+ N W+PV ++ + + EP VI+R +DG +Q+ C HR PL LG +
Sbjct: 4 VTNAWYPVVWADRVGRELTRHVVLEEPIVIYRLEDGSIAALQDACPHRLAPLSLGKLKGD 63
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
I+C YHG + GKC +P + N ++S P + G++W+W GD P A + +
Sbjct: 64 NIECGYHGMTFDCSGKCVLIPGQDVIPGNALVRSYPLQIKYGLVWLWMGD-PKKADLSKM 122
Query: 326 LPPSGFEI---HAEIVMELPIEHGL--LLDNLLDLAHAPFTHTSTFAK--GWSVP 373
+E HA L IE L DNLLD AH F HT+T G +VP
Sbjct: 123 FHLPQYEAEGWHAVQGDTLRIECNYLSLCDNLLDPAHVTFVHTTTLGTPAGATVP 177
>gi|428772905|ref|YP_007164693.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Cyanobacterium stanieri PCC 7202]
gi|428687184|gb|AFZ47044.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanobacterium stanieri
PCC 7202]
Length = 354
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 15/174 (8%)
Query: 216 NFWFPVAFSTDLKDD--TMEPW----VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ VA S ++KD ++ W V+FR G +++ C HR L G V + I
Sbjct: 18 NHWYVVARSVEVKDQPVSVTLWHNEIVLFRDSQGNINALEDRCPHRQVKLSPGKVVDDNI 77
Query: 270 QCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+C YHGW++ +G C +P +L KIK P E +G IW++PGD A P
Sbjct: 78 ECAYHGWQFDKEGNCSFVPYLDERQKLPRCKIKRYPVQELDGFIWLFPGDGDSEAVSPMG 137
Query: 326 LPPSGFEIHAEIVMEL--PIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 377
LP + V E+ P + L++NL+D+ H H + W+ +L K
Sbjct: 138 LPEWEHLNYIASVAEVDCPGHYSYLIENLMDMHHG---HLHDNYQAWASATLNK 188
>gi|299533883|ref|ZP_07047249.1| Rieske (2Fe-2S) protein [Comamonas testosteroni S44]
gi|298718110|gb|EFI59101.1| Rieske (2Fe-2S) protein [Comamonas testosteroni S44]
Length = 346
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 102/246 (41%), Gaps = 54/246 (21%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L N W+ + ++ D E +RG G+ V++ C HR PL LG V E
Sbjct: 3 LLNTWYVACKADEIPQDKPLGRTICNERMAFYRGPQGV-AAVEDFCPHRGAPLSLGFVCE 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
G++ C YHG E +GK MP ++R +I+S P E+ G +W+WPG + P L
Sbjct: 62 GKLICGYHGLEMGCEGKTIAMPGQRVRGFPEIRSFPVVERYGFVWVWPGRK--EEADPGL 119
Query: 326 LPPSGFEIH---------AEIVMELPIEHGLLLDNLLDLAHAPFTH-------------- 362
+P E+H + H L++DNL+DL H + H
Sbjct: 120 IP----ELHWADNPQWAYGGGYYHIKASHLLMIDNLMDLTHETYVHASSIGQKEIDETPC 175
Query: 363 ----------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTI 408
TS F +G +P F A G D P+D F PP V+ +
Sbjct: 176 TTKVEGDHVTTSRFMEG--LPEAPPFWRMALRGNGLPDDQPVDRWQICHFEPPSHVMIEV 233
Query: 409 GISKPG 414
G++ G
Sbjct: 234 GVALAG 239
>gi|422631632|ref|ZP_16696815.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. pisi str. 1704B]
gi|424067650|ref|ZP_17805106.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe013]
gi|330941461|gb|EGH44272.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. pisi str. 1704B]
gi|408000219|gb|EKG40581.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe013]
Length = 354
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 133/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK ++ + P + + M+ +F + + R +
Sbjct: 237 AGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADE---ALTASIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 294 IFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|126654793|ref|ZP_01726327.1| hypothetical protein CY0110_10167 [Cyanothece sp. CCY0110]
gi|126623528|gb|EAZ94232.1| hypothetical protein CY0110_10167 [Cyanothece sp. CCY0110]
Length = 443
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 44/298 (14%)
Query: 250 NTCAHRACPLHLGSVNEG--RIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK--------S 299
+ C HR PL G ++E + C YHGWE+ +G C +P T+ + K S
Sbjct: 51 DQCPHRLAPLSEGRIDENSDNLMCSYHGWEFDQNGICTSIPQTENTKILTKNKQQFACVS 110
Query: 300 LPCFEQEGMIWIWP-------GDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 352
P + G++W+WP ++ P P + GF I + V ++ + L++N+
Sbjct: 111 FPSRQINGLLWVWPDKNSQDLANKTPLPLSPQIDADKGF-IWSSYVRDMAYDWQTLVENV 169
Query: 353 LDLAHAPFTHTSTFA---KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 409
D +H P+ H G +P + TP + F PPC + I
Sbjct: 170 ADPSHVPYAHHGVQGNRNNGQPIPIEIVKSTPNVIEAKIERALNSTITFEPPCRLEYAIK 229
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA-SVLKHVPFMQYLWRH 468
I G + +Q ++ C+P + K+RL+ + +FA S++K +P W H
Sbjct: 230 I-------GDSNKQVGLVVY----CVPVAPGKSRLVGQFPRNFAKSLMKIIP---RWWEH 275
Query: 469 FAEQ--VLNEDLRLV------LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
+ VL D+ L+ L +++ + + LP D+L + +R W D +G
Sbjct: 276 LTTRHLVLEGDMILLQQQEYYLQEKQETQSWKTAYQLPTEADRLVIEFRRWFDTYCQG 333
>gi|111220909|ref|YP_711703.1| oxidoreductase [Frankia alni ACN14a]
gi|111148441|emb|CAJ60112.1| putative oxidoreductase, Rieske [2Fe-2S] region [Frankia alni
ACN14a]
Length = 383
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 132/337 (39%), Gaps = 71/337 (21%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
T L++ W PVA S ++ D+ + EPWV+ R DG+ + C HR PL G V
Sbjct: 9 TTALRHGWHPVARSEEVADEPVTVRLLGEPWVLARLDDGL-AAFADRCPHRLAPLSAGRV 67
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPP 318
+ + C YHGW + G+C +P+ R E+ G+IWI P +EP
Sbjct: 68 DARELVCGYHGWRFVASGECTAVPALGPGVPPPRRARAAPPWGVVERHGLIWIAP-EEPF 126
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEH----GLLLDNLLDLAHAPFTHTSTFAKGWSVPS 374
T I P E + V P GLL DN LD AH PF H T G +
Sbjct: 127 TDLIEI---PEADEPGFDSVWLEPSRSSACAGLLADNFLDTAHFPFVHAGTIGAGEATVV 183
Query: 375 LVKFLTP---------------------ASG----LQGYWDPYPIDMEFRPPCMVLSTIG 409
+TP A+G +Q W Y +RPP M+ +
Sbjct: 184 APYRVTPDGDGFVVQMEQRVANPEDPKVATGEHPLVQRRWSTY----VYRPPFMLRLRLD 239
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCL-PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRH 468
G ++ + CL P TR+ R+ D + M R
Sbjct: 240 YPDAGM------------INTIQFCLQPEDAGSTRIYTRLLRD--DLGGDAALMAEAAR- 284
Query: 469 FAEQVLNEDLRLVLGQQERMN-NGANVWNLPVGYDKL 504
F + VL+EDL L QER + +G + P G + L
Sbjct: 285 FEQAVLDEDLAL----QERFDLDGLPLLGDPPGGEPL 317
>gi|66045944|ref|YP_235785.1| Rieske (2Fe-2S) protein [Pseudomonas syringae pv. syringae B728a]
gi|422672408|ref|ZP_16731772.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aceris str.
M302273]
gi|63256651|gb|AAY37747.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. syringae B728a]
gi|330970146|gb|EGH70212.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aceris str.
M302273]
Length = 354
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 133/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK ++ + P + + M+ +F + + R +
Sbjct: 237 AGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADE---ALTASIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 294 IFTEDLEMLERQQQNLLQHPHRNLLKLNIDAGGVQSR 330
>gi|406039915|ref|ZP_11047270.1| vanillate O-demethylase oxygenase [Acinetobacter ursingii DSM 16037
= CIP 107286]
Length = 358
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ D++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEDIQDKPLGRTICGEKIVFYRGKENKVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG +GK MP+ ++ KS E+ G IW+WPG++ T L
Sbjct: 63 NLVCGYHGLVMGCEGKTISMPAQRVTGFPCNKSYAVVEKMGFIWVWPGEK--TLANEADL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PVLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|307155301|ref|YP_003890685.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306985529|gb|ADN17410.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 337
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 25/192 (13%)
Query: 208 QPYNTRLK------NFWFPVAFSTDLKDDTMEPWVI-------FRGKDGIPGCVQNTCAH 254
QP R++ N+W+PVA++ +LK + P V+ +R G ++N C H
Sbjct: 10 QPVQNRVREIGINPNYWYPVAWAYNLKPTQIIPVVVWQQAIAVYRDSKGQLHALENACPH 69
Query: 255 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIW 310
+ L G V E + CPYHGWE++ +G+C K+ P +L K +S P E+ G+IW
Sbjct: 70 KGVVLDKGEVRENILVCPYHGWEFNPEGECIKIPYLPPEQKLPCAKARSYPVQEKYGIIW 129
Query: 311 IWPGDEPPTATIPCLLPPSGFEIHAEIVMELP----IEHGLLLDNLLDLAHAPFTHTSTF 366
++PGD AT L + I++E+P + +N +D+ H F H +
Sbjct: 130 VFPGDA-SLATQQSLPDLPEYNDPDWIIVEIPAHFKAHFSICNENTMDVFHG-FLHRN-- 185
Query: 367 AKGWSVPSLVKF 378
+GW P L+K
Sbjct: 186 LQGWFDPILLKL 197
>gi|294627570|ref|ZP_06706153.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292598201|gb|EFF42355.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 358
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 127/315 (40%), Gaps = 55/315 (17%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 367
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFE 183
Query: 368 -----KGWSVPSLVKFLTP----------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
+ V ++ + P G G D + I + F P + +G++
Sbjct: 184 VVHGDRSVIVSRWMRNIEPPPFWASQMALHRGYHGKVDRWQI-IHFEAPGTIAIDVGVAI 242
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
G + R + + L+ P + + + ++A H M R+
Sbjct: 243 TGTGAPEGDRSQGVNAYVLNTVTPETDRTCHYFWAFMRNYA---LHDQSMTTTTRNAIAG 299
Query: 473 VLNEDLRLVLGQQER 487
+ ED +VL Q+R
Sbjct: 300 IFGED-EVVLEAQQR 313
>gi|428223387|ref|YP_007107557.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7502]
gi|427996727|gb|AFY75422.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7502]
Length = 455
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 138/338 (40%), Gaps = 37/338 (10%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVIFRGKDGIPGCVQNTCAHRA----CPL 259
+G P K W+PV++ TDL+ + + +D + QN RA CP
Sbjct: 21 AGGTDPAYFDPKEAWYPVSYITDLERTKPTAFTLL-DQDLVLWWDQNNKTWRAFADQCPH 79
Query: 260 HLGSVNEGRI------QCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQE 306
L ++EGRI +CPYHGW + +G C+++P + Q +KS +
Sbjct: 80 RLARLSEGRIAEDGLIECPYHGWAFKGNGSCDRIPQKVKGGTAEQSSRACVKSYATATAQ 139
Query: 307 GMIWIWPGDEPPTATIPCL----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
G++++ G+ +P + P + + +LP + LL+N+LD +H PFTH
Sbjct: 140 GLLFVCLGEYASQVKVPIIDALEQSPEAW-VCLNTFRDLPYDASTLLENVLDSSHLPFTH 198
Query: 363 TSTFAKGWSVPSLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 420
+ + + LT + SG G W P + T+ I+
Sbjct: 199 HESVGNRANAAPVELELTRSDKSGFTGVWAEGPR----KGTLGTQDTVFIAPNLMWHDLT 254
Query: 421 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDL 478
++Q + ++ P + + RL R F+S + + + H + + ED
Sbjct: 255 SKQFGVTMTVVYAT-PMRKGECRLFARFPFQFSSKIPEFFIKLTPQWFSHINQNAILEDD 313
Query: 479 RLVLGQQERM-----NNGANVWNLPVGYDKLGVRYRLW 511
++ L QER N A + LP D + YR W
Sbjct: 314 QIFLHHQERYLELQKTNFAQAYYLPTKADLFVIEYRKW 351
>gi|388547602|ref|ZP_10150865.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. M47T1]
gi|388274362|gb|EIK93961.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. M47T1]
Length = 348
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 139/333 (41%), Gaps = 44/333 (13%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L + E V +R G +++ C HR PL LG V +G+
Sbjct: 4 KNTWYVACTPDELAPGPLGRQICGESMVFYRNGSGQVAALEDFCPHRGAPLSLGRVVDGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIPCL 325
+ C YHG DGK + MP ++ + + ++ C E+ G IW+WPG++ IP L
Sbjct: 64 LVCGYHGLVMGCDGKVQSMPGQRVASFPLTRTFACVERHGFIWVWPGEQALAEPGQIPHL 123
Query: 326 LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK---GWSVPSLV----- 376
+ + + + E+ ++ L++DNL+DL H + H S+ + ++P+
Sbjct: 124 EWANNPQWAYGGGLYEIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEALPTTTVNGDE 183
Query: 377 -------------KFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLEGQ 419
F A G D P+D F PP V+ +G++ G L G
Sbjct: 184 VVTARHMHNIMAPPFWRQALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAG-LGGY 242
Query: 420 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE---QVLNE 476
+ A + V + R +T + Y + + P Q L E ++ +E
Sbjct: 243 DAPD-AHKAASIVVDFITPRTETSIWYFWGM----ARRFRPEDQALTDTIREGQGRIFSE 297
Query: 477 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
DL ++ QQ ++ L + D GVR R
Sbjct: 298 DLEMLERQQRNLSAHPERRLLKLKIDVGGVRAR 330
>gi|299532713|ref|ZP_07046101.1| vanillate monooxygenase [Comamonas testosteroni S44]
gi|298719348|gb|EFI60317.1| vanillate monooxygenase [Comamonas testosteroni S44]
Length = 359
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 22/179 (12%)
Query: 208 QPYNTRLKNF----WFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRAC 257
QP + L F W+ F+ +LKD + +P V+FR +DG +++ C HR
Sbjct: 6 QPMSAALTAFPLDQWYVAGFAWELKDQPVARTLLGQPVVLFRTEDGRVAALEDRCCHREL 65
Query: 258 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGD 315
PL G+V ++C YHG +S +G+C ++P + K +KS E++ ++WIW G
Sbjct: 66 PLSCGTVEAAGLRCGYHGLLFSHEGRCLEIPGQERIPAKACVKSFELRERDQILWIWMGA 125
Query: 316 EPPTATIPCLLPPSGFEIHAEI-------VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P ++P PP+ + +H++ V + L+ DNLLDL+H + H T
Sbjct: 126 TPD--SVPDTEPPA-YAVHSDPKYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHLKTIG 181
>gi|73538170|ref|YP_298537.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia eutropha
JMP134]
gi|72121507|gb|AAZ63693.1| vanillate demethylase subunit A [Ralstonia eutropha JMP134]
Length = 350
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 132/340 (38%), Gaps = 58/340 (17%)
Query: 214 LKNFWFPVAFSTDLKDDTME-------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
++N W+ + ++ + P +++R +DG +++ C HR PL +G
Sbjct: 3 VRNTWYVAGWDNEVGASNLFSRTIIGIPVLMYRAEDGTLHALEDRCCHRGAPLSIGRREG 62
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YHG ++ T G+C + P+ Q +++ LP E+ IWIW GD P A P
Sbjct: 63 DCVRCMYHGLKFDTSGRCIEAPAQQRIPPQARVRVLPVVERNRWIWIWMGD--PEAADPA 120
Query: 325 LLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG-------- 369
L+P P+ + I + + + L+ DNLLD +H PF H +T
Sbjct: 121 LIPDTHWLADPAWRSLDGYIHYD--VNYLLIADNLLDFSHLPFVHPTTLGGSEAYAAAQP 178
Query: 370 -------------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
W++ P K + G W+ Y F P ++L G++
Sbjct: 179 KVERLDDGVRITRWTLNTEAPPFAKQVKNWPGKVDRWNIY----NFTIPAILLMDSGMAP 234
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
G + R A P + T + +FA V R +
Sbjct: 235 TGTGAPEGQRIDAAEFRGCQALTPETENSTHYFFAHPHNFAIDNPEVT------RSIHQS 288
Query: 473 VL---NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
V+ +ED ++ QQ + + +P D ++R
Sbjct: 289 VVTAFDEDRDIITAQQRSLALAPDFKMVPFSIDAALSQFR 328
>gi|443643758|ref|ZP_21127608.1| Vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. syringae B64]
gi|443283775|gb|ELS42780.1| Vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. syringae B64]
Length = 354
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 133/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDR--GKADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK ++ + P + + M+ +F + + R +
Sbjct: 237 AGKGGYNAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADE---ALTASIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 294 IFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|108757788|ref|YP_629242.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
xanthus DK 1622]
gi|108461668|gb|ABF86853.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus
xanthus DK 1622]
Length = 363
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L N WF + S++L D + P V+FRG+ G P + + C HR PL LG V EG
Sbjct: 22 LPNAWFILCASSELGDKPLARTLQGSPLVLFRGEGGKPAALVDRCPHRNVPLSLGRVKEG 81
Query: 268 RIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTAT 321
++QC YHGW + G+C +P R + EQ+G +W++ PG EP T
Sbjct: 82 QLQCGYHGWRFDGAGQCRAIPGFLGEPGARARCATAHATREQDGFVWVYSTPGVEPTTEP 141
Query: 322 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
L + + P L+N LD+ H + H F
Sbjct: 142 YRFPLLEAREYTTVRRTLRAPGSLHSTLENTLDVPHTAYLHGGLF 186
>gi|148557169|ref|YP_001264751.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148502359|gb|ABQ70613.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 350
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 128/314 (40%), Gaps = 43/314 (13%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A++ +++D + P V+ R DG + C HR PL LG + RI
Sbjct: 9 NCWYMAAWADEVRDTLLARRLFGRPIVMARFHDGAAVAFDDRCPHRFAPLSLGRLKGDRI 68
Query: 270 QCPYHGWEYSTDGKC---EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDE--PPTATIP- 323
+C YHG ++ G C + ++ P E+ ++WIWPGD TIP
Sbjct: 69 ECGYHGLQFGRSGACIANPGGGGHFPPGTRTRAYPLVERHRILWIWPGDPALADEGTIPD 128
Query: 324 -CLLPPSGFEIHAEIVMELPIEHGLLL--DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 380
L+PP+G H I L ++ LL DN++DL H F H + + VK
Sbjct: 129 LALIPPAGG--HDNIGNYLHVKANWLLETDNIMDLTHVGFLHDGSLGNATMRAAEVKVSE 186
Query: 381 PASGLQGY-WDPYPI----DMEFRP-----------PCMVLSTIGISKPGKLEGQNTRQC 424
++ W P + M+ +P P +++ G PG Q+
Sbjct: 187 QDGTIRAVLWMPDTLCGFGPMQGQPCDQWNNVVWMAPSIMMMDFGAVPPGAEPIQDKGAY 246
Query: 425 ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV-LNEDLRLVLG 483
A H+ P + + T + S + +P M R +V L ED +V G
Sbjct: 247 A-----FHIFTPETEQSTHYFFGSSGSYGDDEAWIPAMV---REAQSRVFLAEDNPMVEG 298
Query: 484 QQERMNNGANVWNL 497
+RM G + W+L
Sbjct: 299 VADRM-GGEDFWSL 311
>gi|383644423|ref|ZP_09956829.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas elodea ATCC
31461]
Length = 362
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 126/337 (37%), Gaps = 44/337 (13%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
K W+ A + +L D + +P V FRG +G +++ C HR PL LG V +G
Sbjct: 17 KEAWYVAASAGELADRPLGRTICGQPMVFFRGAEGQAIALEDFCPHRGAPLSLGFVRDGE 76
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGD---EPPTATIPC 324
+ C YHG G+ MP ++ R ++ E+ G +W+WPGD P
Sbjct: 77 LVCGYHGLVMGCTGRATSMPGQRVDRFAGVRRFAVIERYGFLWVWPGDFETADPARLHHL 136
Query: 325 LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST------------------- 365
S + + ++ L++DNL+DL H + H+S+
Sbjct: 137 EWAESPEWAYGGGYYHIHCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEAPVETLIDGEQ 196
Query: 366 -----FAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKL 416
F G P K +GL D P+D F P VL +G++ GK
Sbjct: 197 VVTRRFMDGIEAPPFWKMALRGAGLP---DDQPVDRWQICRFTLPSHVLIEVGVALAGKG 253
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 476
+ + P + + M+ FA + + R + E
Sbjct: 254 GYDAEDRWKASSIVVDFITPETETSHHYFWGMARRFA--VADTALTDTI-RTGQGTIFGE 310
Query: 477 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD 513
DL ++ QQ + + + D GVR RL D
Sbjct: 311 DLEMLERQQANLLRYPERKLMKLNIDAGGVRSRLMID 347
>gi|254414093|ref|ZP_05027861.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196179229|gb|EDX74225.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 371
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 136/342 (39%), Gaps = 64/342 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
LKNFW+ FS+ + T +P +V++R G + + C HR L LG V
Sbjct: 2 LKNFWYACEFSSAI---TQKPKQILMLNQRFVLYRNTHGQVVALNDQCPHRGAALSLGWV 58
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGD---- 315
+ ++CPYHGW++ DGKC +P+ + ++ S P E+ G +W++ GD
Sbjct: 59 DNNCLRCPYHGWKFQADGKCIDIPANAPEMPIPKKARVDSYPVQEKYGFVWLFYGDLPPE 118
Query: 316 -EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------ 368
PP T+P + + + E + +++ +D AH H +F +
Sbjct: 119 KRPPLPTLPDFIFANLHPVEYECTEN--AHYARIMEINMDFAHVIAVHKQSFGQRIPLHK 176
Query: 369 ---------GWSVPSLVKFLTPASG------LQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
WS + V + + + L G + F P + LS I I +
Sbjct: 177 TIEYQVEEDAWSGVATVNYESLGNSKSVLNFLLGGRPQLTTRLSFFLPNVTLSEISIGRG 236
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKT---RLLYRMSLDFASVLKHVPFMQYLWRHFA 470
G + L L LP + T R+ YR L F P++ L+R
Sbjct: 237 GSFD--------IKLIVLIAHLPIDEETTVVKRIFYRNFLRF-------PWLDGLFRKLD 281
Query: 471 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWR 512
++ ED +V + + L V D LG+ YR R
Sbjct: 282 SKLTEEDAVIVTSLSPKSMPKLSE-ELHVAADALGLAYRKLR 322
>gi|425458836|ref|ZP_18838322.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9808]
gi|389823864|emb|CCI27654.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9808]
Length = 349
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 67/359 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L++FW+ + LK + EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 267 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 316
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 317 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTISDFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 368 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 427
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 428 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 469
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRHLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 470 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|264680321|ref|YP_003280231.1| vanillate monooxygenase [Comamonas testosteroni CNB-2]
gi|262210837|gb|ACY34935.1| vanillate monooxygenase [Comamonas testosteroni CNB-2]
Length = 359
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 22/179 (12%)
Query: 208 QPYNTRLKNF----WFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRAC 257
QP + L F W+ F+ +LKD + +P V+FR +DG +++ C HR
Sbjct: 6 QPTSAALPAFPLDQWYVAGFAWELKDQPVARTLLGQPVVLFRTEDGRVAALEDRCCHREL 65
Query: 258 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGD 315
PL G+V ++C YHG +S +G+C ++P + K +KS E++ ++WIW G
Sbjct: 66 PLSCGTVEAAGLRCGYHGLLFSHEGRCLEIPGQERIPAKACVKSFELRERDQILWIWMGA 125
Query: 316 EPPTATIPCLLPPSGFEIHAEI-------VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P ++P PP+ + +H++ V + L+ DNLLDL+H + H T
Sbjct: 126 TP--DSVPGTEPPA-YAVHSDPQYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHLKTIG 181
>gi|405355684|ref|ZP_11024859.1| iron-sulfur cluster-binding protein, Rieske family [Chondromyces
apiculatus DSM 436]
gi|397091391|gb|EJJ22209.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 366
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L N WF + S++L D + P V+FRG+ G P + + C HR PL LG V EG
Sbjct: 25 LPNAWFILCASSELGDKPLARTLQGSPLVLFRGEGGKPATLVDRCPHRNVPLSLGRVKEG 84
Query: 268 RIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTAT 321
++QC YHGW + G+C +P R + EQ+G +W++ PG EP T
Sbjct: 85 QLQCGYHGWRFDGAGQCRAIPGFLGEPGARARCATAHATREQDGFVWVYSTPGVEPTTE- 143
Query: 322 IPCLLPPSGFEIHAEI--VMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
P P ++ + ++ P L+N LD+ H + H F
Sbjct: 144 -PYRFPLLEAREYSTVRRMLRAPGSLHATLENTLDVPHTAYLHGGLF 189
>gi|414079207|ref|YP_007000631.1| pheophorbide a oxygenase [Anabaena sp. 90]
gi|413972486|gb|AFW96574.1| pheophorbide a oxygenase [Anabaena sp. 90]
Length = 443
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 130/301 (43%), Gaps = 60/301 (19%)
Query: 250 NTCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKS 299
+ C HR PL G + + G + C YHGWE++ +G C+++P + N + S
Sbjct: 51 DQCPHRLAPLSEGRIEDKTGNLMCSYHGWEFNENGICQRVPQAENPEIVTKNQDNFCVIS 110
Query: 300 LPCFEQEGMIWIWPGDEPPTATI----PCLLPPS-----GFEIHAEIVMELPIEHGLLLD 350
P +Q+ ++W+WP ++ TA I P L P GF + + + +L + L++
Sbjct: 111 FPVRQQQELLWVWPDEK--TAAIAENTPLPLSPQIDAEKGF-VWSNYIRDLEYDWQTLVE 167
Query: 351 NLLDLAHAPFTHTSTFA---KGWSVP-SLVKF------LTPASGLQGYWDPYPIDMEFRP 400
N+ D +H PF H K +P ++VK + A GL P + F P
Sbjct: 168 NVADPSHVPFAHHGVQGNRDKAQPIPINIVKSTMDLIEVDIARGL-------PTTITFEP 220
Query: 401 PCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVP 460
PC + I + GK L + C+P S K+R++ + +FA L +
Sbjct: 221 PCRLEYAISLGNTGK-----------KLGLVVYCIPVSPGKSRIVAQFPRNFAKTLHRI- 268
Query: 461 FMQYLWRHFAEQVLNEDLRLVLGQQER--------MNNGANVWNLPVGYDKLGVRYRLWR 512
+ W H E+ L D ++ QQ+ + + LP D+L + +R W
Sbjct: 269 -IPRWWNHINERHLVLDGDMIFLQQQEYYLQQKQLTQSWKTAYKLPTNADRLVIEFRNWF 327
Query: 513 D 513
D
Sbjct: 328 D 328
>gi|307153246|ref|YP_003888630.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7822]
gi|306983474|gb|ADN15355.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7822]
Length = 482
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 143/351 (40%), Gaps = 59/351 (16%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLK------------------DDTMEPWVIFRGKDGIP 245
+G + P + W+P+ + DL D + W +F
Sbjct: 37 AGGLDPTRFDPQEAWYPIHYVKDLDKTKPTSFTLLDRKLVIWWDKNADQWRVF------- 89
Query: 246 GCVQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP----STQLRNVK---I 297
+ C HR L G +NE G I+CPYHGW +S GKCE +P T+ + K +
Sbjct: 90 ---DDQCPHRLALLSEGRINEEGLIECPYHGWTFSGSGKCEFIPQQPQGTKAEDSKRACV 146
Query: 298 KSLPCFEQEGMIWIWPGD--EPPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNL 352
SLP +G+++ +PG+ P +P + P SG + + +LP + +L+N+
Sbjct: 147 NSLPVSVCQGLLFTYPGNPENAPKVRVPIIEPLEDNSGEWVCIDTFRDLPYDALTVLENV 206
Query: 353 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY---WDPYPIDMEFRPPCMVLSTIG 409
LD +H P+TH T + + V+ SG +G+ W+ P + TI
Sbjct: 207 LDSSHVPYTHHGTVGNRQNA-APVELEIVKSGREGFIGAWEEGPR----KGTLGRQDTIF 261
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWR 467
I+ ++Q L ++ P S+ K RL R FA+ L + +
Sbjct: 262 IAPNFMYHDLTSKQFGRTLTVVYAT-PISKGKCRLFARFPFKFAAKLPGLFINLTPRWYS 320
Query: 468 HFAEQVLNEDLRLVLGQQERM---NNGANVWN----LPVGYDKLGVRYRLW 511
H + + ED ++ L QER G+ +N LP D R W
Sbjct: 321 HTNQNTILEDDQIFLHYQERFLEQAGGSQKFNKAFYLPTKADTYVSALRQW 371
>gi|440723531|ref|ZP_20903894.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34876]
gi|440728015|ref|ZP_20908238.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34881]
gi|440359506|gb|ELP96814.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34876]
gi|440362544|gb|ELP99731.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34881]
Length = 354
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 133/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDR--ENADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFNIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK ++ + P + + M+ +F + + R +
Sbjct: 237 AGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEA---LTASIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 294 IFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|317970428|ref|ZP_07971818.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
CB0205]
Length = 432
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 64/318 (20%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMEPWVIFRGKDGIPG---------CVQNTCAHRACPLHL 261
+ R +N WFPVAF DL + P+ + G+D + + C HR PL
Sbjct: 3 SNRWQNAWFPVAFLRDLDRNRPTPFTLV-GQDLVLWFDRQADEWRAFADVCPHRLVPLSD 61
Query: 262 GSVNE-GRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPG- 314
G +N G ++CPYHGW + G+C P S+ +S +G+++++ G
Sbjct: 62 GRLNAAGELECPYHGWSFDGSGRCTLQPQAEPGSSISGRSHCRSYATACAQGLLFVFSGP 121
Query: 315 ----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 370
E P +P +L +G+ + + +LP++ LL+N+LD +H PFTH +T +
Sbjct: 122 SEQAREQPLPLVP-VLDEAGWVVQ-DTFRDLPMDALTLLENVLDASHVPFTHHATVGRRE 179
Query: 371 SVPSLVKFLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
+ + LT G G W+ P + GKL Q+TR A L
Sbjct: 180 NAAPVALALTGFDRDGFTGLWEEGP------------------RRGKLGSQHTRFLAPGL 221
Query: 429 --HQLHV-----------CLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRHFA 470
H L +P+ + RL+ R F+S +L+ P Q+L +H
Sbjct: 222 MWHDLTAKGFARILTVVYAVPTRPGECRLIARFPFQFSSPWPGRLLRLRP--QWL-QHIG 278
Query: 471 EQVLNEDLRLVLGQQERM 488
+ ED +L L QER+
Sbjct: 279 NHTVLEDDQLFLHWQERV 296
>gi|21224976|ref|NP_630755.1| oxidoreductase subunit alpha [Streptomyces coelicolor A3(2)]
gi|3334811|emb|CAA19959.1| oxidoreductase alpha subunit [Streptomyces coelicolor A3(2)]
Length = 359
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 144/338 (42%), Gaps = 51/338 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SVN 265
+N W+ A+S ++ + + EP V++R + DG P + + C HR PL ++
Sbjct: 9 RNQWYVAAYSHEVGRELLGRTVLGEPLVLYRAEEDGGPVVLHDRCVHRRYPLSEAPTRLD 68
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
RI C YHG+ Y T G C +P + R ++ S P E++ ++W+W GD P P
Sbjct: 69 GDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVAERDSLVWVWIGD--PALADP 126
Query: 324 CLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------- 362
+P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 127 EAVPRARHLDAPGWVTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGHIGTPEVAETP 183
Query: 363 -TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
T+ +G + + + F ++G+ G D + D+E+ PC+ + ++
Sbjct: 184 ITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIVGRIDRWQ-DIEYHAPCLYVLHSRVAP 242
Query: 413 PGKLEGQNTRQC-ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 471
G + + H + PS K + +S D+A+ V ++L++
Sbjct: 243 TGTVPAPDGGDPEGFHTEITYAITPSGDGKVYDFWAVSRDWATDDAEV--TEFLYKSNRT 300
Query: 472 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
V+ + L L Q+ A L + D G+ R
Sbjct: 301 VVMQDVDALNLLQRTLGGERAGYQELSINIDTGGLAAR 338
>gi|415908364|ref|ZP_11552965.1| Vanillate O-demethylase, oxygenase subunit [Herbaspirillum
frisingense GSF30]
gi|407762803|gb|EKF71586.1| Vanillate O-demethylase, oxygenase subunit [Herbaspirillum
frisingense GSF30]
Length = 349
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 45/240 (18%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + E V +RG +G V++ C HR PL LG V +G+
Sbjct: 4 KNAWYVACTPDEIASKPLGRQICGEKIVFYRGAEGQVAAVEDFCPHRGAPLSLGFVRDGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG E DGK MP ++R I+S E+ G IW+WPG++ P L+
Sbjct: 64 LVCGYHGLEMGCDGKPVSMPGQRVRGFPCIRSFAVVERYGFIWVWPGEK--ELADPALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH-------------------- 362
+ + E + + ++ L++DNL+DL H + H
Sbjct: 122 HLEWADNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRVEG 181
Query: 363 ----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
TS + + P + +GL D P+D F PP V+ +G++ G
Sbjct: 182 EQVITSRYMENIMAPPFWRMALRGNGLA---DDVPVDRWQVCRFTPPSHVMIEVGVAHAG 238
>gi|434384793|ref|YP_007095404.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428015783|gb|AFY91877.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 333
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 21/191 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTMEPWVIFRGK-------DGIPGCVQNTCAHRACPLHLGSVNE 266
+ FW+PV + DL + +P+ + K +G P ++ C HR+ L LG V
Sbjct: 9 FRKFWYPVIPTADLLG-SPQPFTLLGQKIVLWLDAEGKPAAAKDRCCHRSAQLSLGKVVN 67
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV------KIKSLPCFEQEGMIWIWPGDEPPTA 320
G I CPYHGW++ + G+C +P QL++V +I++ C E+ G W+ + P A
Sbjct: 68 GAIACPYHGWQFDSSGRCVCVP--QLKDVGIPAAARIETYRCTEKYGYAWVCLDE--PIA 123
Query: 321 TIPCLLPP--SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLVK 377
IP + S F + E +++N LDLAH F HT+TF ++ P ++
Sbjct: 124 EIPHIAEAFESDFRLIPEFYETWKCAGLRVMENELDLAHPTFVHTTTFGSEDHPTPDRLE 183
Query: 378 FLTPASGLQGY 388
SGL+ +
Sbjct: 184 ITETPSGLRAH 194
>gi|390167216|ref|ZP_10219213.1| putative Rieske protein [Sphingobium indicum B90A]
gi|389590161|gb|EIM68162.1| putative Rieske protein [Sphingobium indicum B90A]
Length = 430
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 88/194 (45%), Gaps = 20/194 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LK W+ A S+++ + +IFR G +Q+ C HR PL +GS
Sbjct: 76 LKRAWYVAALSSEVDATQLFHRRILGMSVLIFRNAQGEAVALQDRCPHRFAPLSMGSRVG 135
Query: 267 GRIQCPYHGWEYSTDGKCEKMP--STQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
I CPYHG + G C P QL R ++ P E+ G IWIW +E A P
Sbjct: 136 DAIACPYHGLRFDAGGHCVHNPHGRGQLPRGQVVRGFPLIERHGFIWIWMAEE---AADP 192
Query: 324 CLLPPSG--FEIHAEIV----MELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 376
LLP HA V M+LP+++ L+LDN++DL+H + H +G P +
Sbjct: 193 ALLPDFSPLDRGHANGVGHTYMKLPVDYRLILDNVMDLSHVDYVHGEIITTRGQLSPLIP 252
Query: 377 KFLTPASGLQGYWD 390
+ + + WD
Sbjct: 253 QVEETENSVSASWD 266
>gi|425466450|ref|ZP_18845748.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9809]
gi|389831010|emb|CCI26578.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9809]
Length = 460
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 130/339 (38%), Gaps = 57/339 (16%)
Query: 215 KNFWFPVAFSTDLK------------------DDTMEPWVIFRGKDGIPGCVQNTCAHRA 256
+ W+P+ + DL D + W +F K C HR
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDK----------CPHRL 70
Query: 257 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGM 308
PL G +NE G ++CPYHGW +S G CE +P + R ++S P ++G+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 309 IWIWPGD--EPPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 363
++++ G+ P IP + P + I + +LP L++N++D +H P+TH
Sbjct: 131 LFVYAGNPENAPLTAIPIIEPMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHH 190
Query: 364 STFA-KGWSVPSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
T + + P ++ + + G +G W P R + PG + T
Sbjct: 191 LTIGNRANAAPMELEIIESNRQGFKGIWPEGP-----RKGKLGQQYSNFIAPGLIYHDLT 245
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLR 479
+ P + + RL R F S L + + H + + ED +
Sbjct: 246 SEKFGRTLTAVYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQ 305
Query: 480 LVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
+ L QER N + LP D L YR W
Sbjct: 306 IFLYYQERYLQAQGDSRNFSQACYLPTKADLLVFEYRNW 344
>gi|427724958|ref|YP_007072235.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Leptolyngbya
sp. PCC 7376]
gi|427356678|gb|AFY39401.1| Rieske (2Fe-2S) iron-sulfur domain protein [Leptolyngbya sp. PCC
7376]
Length = 363
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 28/207 (13%)
Query: 184 TSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVI 237
TS+QS+ V G + ++ KN W+ A S ++ D E +V+
Sbjct: 5 TSQQSVIAVSGSSDVRVCGIN----------KNHWYVAALSREVIDQPFGLTLWKEKFVL 54
Query: 238 FRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---STQLR- 293
FR + G +++ C HR L G V R++C YHGW++ +G C +P Q R
Sbjct: 55 FRDRQGSVHALEDRCPHRQVKLSSGQVVGDRLECAYHGWQFDAEGTCAHVPYLAENQRRP 114
Query: 294 NVKIKSLPCFEQEGMIWIWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIE--HGLL 348
N KI+SLP EQ+G IW++PGD P LP + V + E L
Sbjct: 115 NCKIRSLPVREQDGFIWVFPGDLETLEEQKIEPFSLPEWAHLNYIVTVSVIDCEGHFSYL 174
Query: 349 LDNLLDLAHAPFTHTSTFAKGWSVPSL 375
++NL+D+ H H + W+ L
Sbjct: 175 IENLMDMYHG---HLHNDYQAWASAKL 198
>gi|398993816|ref|ZP_10696751.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398133724|gb|EJM22909.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 368
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 23/188 (12%)
Query: 200 SLNVSGPVQPYNTRLK-----NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCV 248
S++V+ P P + + + W+ FS +L + + EP VIFR +G +
Sbjct: 2 SVHVTQPFDPLHDKPAAAFPLDQWYVAGFSWELNNKPLARTLLGEPLVIFRTGNGQVAAL 61
Query: 249 QNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQ 305
++ C HR+ PL LG+V E ++C YHG YST G+C ++P Q++ K++S EQ
Sbjct: 62 EDRCCHRSVPLSLGTVEEQGVRCGYHGLLYSTSGQCLEIPG-QVKIPGKAKVRSFHICEQ 120
Query: 306 EGMIWIWPGDEPPTATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 359
+ ++W+W G + P PP SG + V L+ DNLLDL+H
Sbjct: 121 DQILWVWFGHD--VLAAPLREPPAYPHHTSGEYLFGGDVYHYDAPWQLIHDNLLDLSHLG 178
Query: 360 FTHTSTFA 367
+ H T
Sbjct: 179 YVHLHTIG 186
>gi|425469857|ref|ZP_18848759.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9701]
gi|389880265|emb|CCI38966.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9701]
Length = 349
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 67/359 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L++FW+ + LK + EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 267 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 316
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 317 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTIADFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 368 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 427
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 428 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 469
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRHLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 470 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPV 340
>gi|397735423|ref|ZP_10502121.1| rieske domain protein [Rhodococcus sp. JVH1]
gi|396928725|gb|EJI95936.1| rieske domain protein [Rhodococcus sp. JVH1]
Length = 345
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LKN W+ A+S DL + P V++R DG+ + + C HR PL G +N+
Sbjct: 4 LKNAWYMAAWSQDLGVGKLLSRTIIEVPVVLYRSNDGVAHALMDRCPHRFAPLSRGELND 63
Query: 267 GRIQCPYHGWEYSTDGKCEK--MPSTQL-RNVKIKSLPCFEQEGMIWIWPGD-EPPTATI 322
I C YHG E+ DG C + PS ++ + + + P E++ + WIW GD +P I
Sbjct: 64 RGIACGYHGLEFDHDGVCIRNPHPSGKIPKRAHVNAYPVVERDTIAWIWMGDRDPDEDLI 123
Query: 323 P---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P L +G ++M+ + L++DNLLD +H F H
Sbjct: 124 PDYSILTKSNGVTRRDYLLMDASFD--LIVDNLLDCSHTSFLHKGVLG 169
>gi|390438979|ref|ZP_10227404.1| Pheophorbide a oxygenase [Microcystis sp. T1-4]
gi|389837609|emb|CCI31528.1| Pheophorbide a oxygenase [Microcystis sp. T1-4]
Length = 459
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 130/339 (38%), Gaps = 57/339 (16%)
Query: 215 KNFWFPVAFSTDLK------------------DDTMEPWVIFRGKDGIPGCVQNTCAHRA 256
+ W+P+ + DL D + W +F K C HR
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDK----------CPHRL 70
Query: 257 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGM 308
PL G +NE G ++CPYHGW +S G CE +P + R ++SLP ++G+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSLPTAIRQGL 130
Query: 309 IWIWPGD--EPPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 363
++++ G+ P IP + P + I + +LP L++N++D +H P+TH
Sbjct: 131 LFVYAGNPENAPLTAIPIIEPLEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHH 190
Query: 364 STFA-KGWSVPSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
T + + P ++ + + G +G W P R + PG + T
Sbjct: 191 LTIGNRANAAPMELEIIESNRQGFKGIWPEGP-----RKGQLGQQYSNFIAPGLIYHDLT 245
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLR 479
+ P + + RL R F S L + + H + + ED +
Sbjct: 246 SEKFGRTLTAVYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQ 305
Query: 480 LVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
+ L QER N + LP D YR W
Sbjct: 306 IFLYYQERYLQARGDSRNFSQACYLPTKADLFVFEYRNW 344
>gi|407713699|ref|YP_006834264.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
gi|407235883|gb|AFT86082.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
Length = 350
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 131/339 (38%), Gaps = 56/339 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
++N W+ A+S +++ D + P +++R + G + + C HR PL LG
Sbjct: 3 IRNTWYVAAWSHEVEGDKLFSRTIINTPVMLYRKESGEVIALADRCCHRGAPLSLGRREG 62
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YHG ++ + G C + P+ + + K++ P EQ IWIW G+ P P
Sbjct: 63 DCVRCMYHGLKFDSQGACIEAPAQERIPLHAKVRQFPVVEQHRWIWIWMGE--PELADPS 120
Query: 325 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG---------- 369
+P + + + + + + L+ DNLLD +H P+ H +T G
Sbjct: 121 TIPDTHWVDDPQWRSLPGYIHYDVNYLLICDNLLDFSHLPYVHPTTLGGGEDYAAVRPKV 180
Query: 370 -----------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 414
W++ P VK + G W+ Y +F P ++ G++ G
Sbjct: 181 ERIKDGVRITRWTLNTEPPPFVKAVRDWPGNVDRWNIY----DFTIPAILRMDSGMAPVG 236
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY----RMSLDFASVLKHVPFMQYLWRHFA 470
+ R A H P + T + SLD V + +
Sbjct: 237 TGAPEGKRVDAAEFHGCQALTPETEGSTHYFFAHPHNFSLDKPEVTRSI-------HQSV 289
Query: 471 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ED +V Q + + +P G D ++R
Sbjct: 290 VDAFDEDREMVSAQHRNLALDPDFKMMPFGIDAALSQFR 328
>gi|410461849|ref|ZP_11315486.1| Rieske (2Fe-2S) domain-containing protein [Bacillus azotoformans
LMG 9581]
gi|409925107|gb|EKN62336.1| Rieske (2Fe-2S) domain-containing protein [Bacillus azotoformans
LMG 9581]
Length = 429
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM--------EPWVIFRGKDGIPGCVQNTC 252
L +GP P + +W P S +LK D E + FR +G G ++ C
Sbjct: 10 LTRTGPGTPMGDLFRLYWIPALKSDELKSDGKPQKIKLLSEDLIAFRDTEGKVGLMEEAC 69
Query: 253 AHRACPLHLGSVNEG-RIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQE 306
HR ++ G +NEG ++C YHGW+++T+G C ++PS + + +KIKS P E +
Sbjct: 70 PHRGTSMYYG-INEGCGLRCMYHGWKFNTNGDCTEIPSEEGDPKFRQKIKIKSYPVKEVK 128
Query: 307 GMIWIWPGDEPPTATIPCLL---PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 363
GMIW + G E P P + + + E + +++N LD HA F H
Sbjct: 129 GMIWTYMGPEEKMPEFPEFYWMGLPDDYVMSERVWQE--CNYAQVMENDLDYVHAAFLHK 186
Query: 364 ST 365
+
Sbjct: 187 AN 188
>gi|330819552|ref|YP_004348414.1| phenylpropionate dioxygenase [Burkholderia gladioli BSR3]
gi|327371547|gb|AEA62902.1| Phenylpropionate dioxygenase [Burkholderia gladioli BSR3]
Length = 369
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 19/162 (11%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+FW+P+A+S +LK +P V+FRG+ G +++ CAHR PLH G V+
Sbjct: 31 DFWYPLAWSRELKRGKTLGVQFAGDPIVLFRGESGTVFALEDRCAHRQVPLHAGVVDGDA 90
Query: 269 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPG-----DEPPTA 320
++C YHGW Y GKC +P +L N +++ PC E G+I+++ G DE P
Sbjct: 91 LRCGYHGWTYDCSGKCVDVPYLGKERLPN-GVRAYPCREVRGLIFVFTGDPALADEKPVP 149
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
+P + P + + + +NL+D+ H F H
Sbjct: 150 ELPTVADPK--YKTRRFGRAVKCHYSFMHENLMDMNHQ-FLH 188
>gi|307107837|gb|EFN56079.1| hypothetical protein CHLNCDRAFT_145588 [Chlorella variabilis]
Length = 563
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 135/346 (39%), Gaps = 60/346 (17%)
Query: 218 WFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN-EGRI 269
W+P+A+ D+ DD +P VI++ G C+++ C HR PL G + G +
Sbjct: 93 WYPIAYVKDIPDDAPYGFVLLEQPIVIWKDGGGAYRCLRDACPHRLVPLSDGRIAPNGEL 152
Query: 270 QCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWI------WPGDEPPTA 320
QCPYHGW++ G C MP + C ++G++W+ G EP T+
Sbjct: 153 QCPYHGWQFKGCGTCTLMPQGGDPTAPRAAATAYQCAVKQGLVWVKLQPAPTDGSEPDTS 212
Query: 321 TIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 378
+I + L G+ ++ ++P + L++N++D H PFTH A +L
Sbjct: 213 SIHTIPELDKEGWFAFGDMWRDIPYDWATLIENVVDCGHVPFTHHGERA------ALGVL 266
Query: 379 LTPASGLQGYWDPYPID-------MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 431
G QG W P F P ++ TI + +TR
Sbjct: 267 ERGQFGFQGVWPTGPRKGALGAQHTRFEGPVLMRHTI--------DAFDTRGFGNITAVY 318
Query: 432 HVCLPSSRKKTRLLYRMSLDFASVLKHVPF--MQYLWRHFAEQ-VLNED---------LR 479
V P + + R + R F + L + F M H VL+ED
Sbjct: 319 GV--PVAPGRCRAIVRQPFRFKNKLLPLAFKVMPAFLGHLGNNSVLDEDNIFLHMQARAC 376
Query: 480 LVLGQQERMNNG------ANVWNLPVGYDKLGVRYRLWRDALEKGA 519
+ +QE + G V+ +P D +R W ++ G
Sbjct: 377 FLPAEQESVRRGMGEKPAGQVYYMPAASDAYVSAFRNWMKSVAGGG 422
>gi|425447660|ref|ZP_18827645.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9443]
gi|389731719|emb|CCI04257.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9443]
Length = 349
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 67/359 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L++FW+ + LK + EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 267 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 316
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 317 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINQENLPPVPTISDFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 368 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 427
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 428 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 469
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 470 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|425441227|ref|ZP_18821508.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9717]
gi|389718122|emb|CCH97874.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9717]
Length = 349
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 67/359 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L++FW+ + LK + EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 267 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 316
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 317 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINQENLPPVPTIADFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 368 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 427
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 428 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 469
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 470 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|365885381|ref|ZP_09424384.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 375]
gi|365285960|emb|CCD96915.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 375]
Length = 347
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 129/328 (39%), Gaps = 42/328 (12%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++K M + V++R DG +++ C HR PL G + +
Sbjct: 8 NAWYAAAWDAEVKQALMPRTICGKHVVMYRKADGTIAALEDACWHRLVPLSKGRLEGDTV 67
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG ++S G+C MPS + N +++ P E+ IW+W GD P P +P
Sbjct: 68 VCGYHGLKFSPQGRCTYMPSQETINPSACVRAYPAVERHRFIWLWMGD--PALADPATIP 125
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------GW 370
+ +++ ++ L++DNL+DL H F H S+ G
Sbjct: 126 DMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHGE 185
Query: 371 SVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
++ + F G G D + I + F PC V +G++ G +
Sbjct: 186 RTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTVTIDVGVAPAGTGAPEGD 244
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
R + L+ P + K + + ++ L + R + ED ++
Sbjct: 245 RSQGVNGMVLNTITPETDKTCHYFWAFARNYQ--LSEQRLTTEI-REGVSGIFREDELIL 301
Query: 482 LGQQERM--NNGANVWNLPVGYDKLGVR 507
QQ M N G +NL + + R
Sbjct: 302 EAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|422669981|ref|ZP_16729817.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330982326|gb|EGH80429.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 354
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 133/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFYIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK ++ + P + + M+ +F + + R +
Sbjct: 237 AGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEA---LTASIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 294 IFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|349574249|ref|ZP_08886206.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
shayeganii 871]
gi|348014197|gb|EGY53084.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
shayeganii 871]
Length = 365
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 13/191 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L N+W+ A D++ +V+F +G +++ C HR PL G V G
Sbjct: 32 LHNYWYIAATERDVRRKPQCLTLFDRHYVVFHAGNGRFAAMEDRCPHRNAPLSAGKVCNG 91
Query: 268 RIQCPYHGWEYSTDGKCEKMPS---TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
+I+CPYHGW+++ DG+ ++P+ L ++I ++ C Q+G +W+ PG+ A +P
Sbjct: 92 QIRCPYHGWQFAADGRLARIPALDGQALPAIRIPTVHCTAQDGYVWLCPGNPATPAPLPF 151
Query: 325 -LLPPSGF-EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
L +G+ P+ L+N LD HA + H S F P A
Sbjct: 152 PHLNEAGWTSFRMRTRFAAPVAQ--CLENFLDCPHAVYVHDSWFRSATGKPVRATLRHLA 209
Query: 383 SGLQGYWDPYP 393
G + ++ P
Sbjct: 210 DGAEVEYENEP 220
>gi|440754141|ref|ZP_20933343.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
gi|443657111|ref|ZP_21131830.1| rieske [Microcystis aeruginosa DIANCHI905]
gi|159029863|emb|CAO90917.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|440174347|gb|ELP53716.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
gi|443333240|gb|ELS47808.1| rieske [Microcystis aeruginosa DIANCHI905]
Length = 349
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 67/359 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L++FW+ + LK + EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 267 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 316
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 317 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTIADFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 368 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 427
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 428 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 469
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 470 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|425433924|ref|ZP_18814397.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9432]
gi|389679212|emb|CCH91981.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9432]
Length = 349
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 67/359 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L++FW+ + LK + EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 267 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 316
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 317 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTISDFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 368 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 427
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 428 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 469
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 470 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|380513012|ref|ZP_09856419.1| vanillate o-demethylase oxygenase subunit protein [Xanthomonas
sacchari NCPPB 4393]
Length = 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 127/331 (38%), Gaps = 62/331 (18%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAH 254
+ S P P N W+ +A+ ++K + V++R +G +++ C H
Sbjct: 1 MQSSAPAFPLNA-----WYAIAWDHEVKHALLPRKVCNLDIVLYRTSNGRVAALEDACWH 55
Query: 255 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIW 312
R PL +G + + C YHG Y +G+C MPS N ++ P E+ +W+W
Sbjct: 56 RLVPLSMGRLRGDDVVCGYHGLVYDANGRCVHMPSQDTINPSACVRRFPTVERHRYVWVW 115
Query: 313 PGDEPPTATIPCLLPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 361
PGD P L+P G IH + ++ L+LDNL+DL H F
Sbjct: 116 PGD--AALADPALVPDLHWNDDPAWAGDGRTIHVKC------DYRLVLDNLMDLTHETFV 167
Query: 362 HTSTFAKG--------------------WSV-----PSLVKFLTPASGLQGYWDPYPIDM 396
H S+ + W + P + A G +G D + I +
Sbjct: 168 HGSSIGQDEVAEAPFDVVHGERSTVVSRWMLDIDPPPFWAWQIEHAHGYRGKVDRWQI-I 226
Query: 397 EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVL 456
F PC + +G++ G Q R + + L+ P + + + + +
Sbjct: 227 RFEAPCTIAIDVGVAVAGSGAPQGDRSRGVNGYVLNTITPETDRTCHYFWAFVRNHS--- 283
Query: 457 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQER 487
H + R V ED LVL Q+R
Sbjct: 284 LHEQSITTRLRDGVTGVFGED-ELVLEAQQR 313
>gi|425450965|ref|ZP_18830788.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 7941]
gi|389767970|emb|CCI06791.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 7941]
Length = 349
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 67/359 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L++FW+ + LK + EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 267 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 316
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 317 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTIADFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 368 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 427
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRQFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 428 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 469
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 470 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|239813648|ref|YP_002942558.1| Rieske (2Fe-2S) domain-containing protein [Variovorax paradoxus
S110]
gi|239800225|gb|ACS17292.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 353
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 140/348 (40%), Gaps = 53/348 (15%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAH 254
+N PY + N W+ A++ DL P +++R +DG P +++ C H
Sbjct: 1 MNTDASPSPY---VHNAWYVAAWAKDLVHAMRAITIMDRPVLLYRTEDGRPIALEDRCCH 57
Query: 255 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIW 312
R PL G++ +QC YHG+ + G+C +P+ + ++K P E ++WIW
Sbjct: 58 RRVPLSRGTLIGDTVQCGYHGFTFDCSGQCIAIPNQEQIPPRARVKGYPVCEMHHLVWIW 117
Query: 313 PGDEPPTATIPCLLPPSGFEI-----HA--EIVMELPIEHGLLLDNLLDLAHAPFTHTST 365
GD P L+P F + HA M + L++DNL DL+H F H+ST
Sbjct: 118 MGD--PARADEALVP--DFSVLSDPRHAWERDYMHAKGNYRLIVDNLNDLSHLSFVHSST 173
Query: 366 FAKGWSVPSLVKFLTPASGL-QGYWD---------------PYPID----MEFRPPCMVL 405
+ + ++ G+ Q W PID + F PP
Sbjct: 174 IGNAATALAELEVSDGEQGVTQTRWMINTPPPPTYQRLAGFEGPIDRWQVIAFLPP---- 229
Query: 406 STIGISKPGKLEGQNTRQC----ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF 461
+T+ I G+ R + LH P + + + + DF + V
Sbjct: 230 TTVRIRTGGRARSNGERNFDGDDTIGMVALHAITPETATTSHYFWAQTHDFRTDEPAV-- 287
Query: 462 MQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
Q L++ ++ +EDL + QQ + N N + D+ + R
Sbjct: 288 TQSLFQEI-KKAFHEDLEIFALQQAAIQNDPNGEEISCRADRAQIAVR 334
>gi|424776775|ref|ZP_18203751.1| vanillate O-demethylase oxygenase [Alcaligenes sp. HPC1271]
gi|422888068|gb|EKU30460.1| vanillate O-demethylase oxygenase [Alcaligenes sp. HPC1271]
Length = 347
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ A +T L E V++R +DG P ++++C HR PL G +
Sbjct: 3 VRNAWYVGALATQLGRSLQPVRMLSENLVLYRREDGQPVALEDSCPHRRLPLSKGRLIGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+++C YHG + G C K P R+ ++S PC E+ G++W+W GD P A L
Sbjct: 63 QVECGYHGLTFDCSGSCTKAPGVAQIPRSAVVRSYPCTERFGLVWVWMGD-PELADPSKL 121
Query: 326 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
+ +E ++ MEL + + DNLLD +H + H S+F
Sbjct: 122 IDIPEWENPEWGVNRGDAMELDCNYLYVTDNLLDPSHVSWVHQSSFG 168
>gi|428316589|ref|YP_007114471.1| Rieske (2Fe-2S) iron-sulfur domain protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428240269|gb|AFZ06055.1| Rieske (2Fe-2S) iron-sulfur domain protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 356
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 204 SGPVQPYNTRLKNF------WFPVAFSTDLKDDTMEP--W----VIFRGKDGIPGCVQNT 251
SG V+ T ++ W+ +A ST++++ + W V+FR G +++
Sbjct: 8 SGSVRGQKTHIRQLGINLDRWYAIARSTEVQNQPLAAKIWNRAIVLFRDSSGKINALEDR 67
Query: 252 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQEG 307
C HR L G V I+C YHGW + G+C ++ + +L N KI+S P E+ G
Sbjct: 68 CPHRQVKLSHGQVKGDLIECAYHGWRLNARGECAEVDYLAENQKLPNCKIRSYPVKEKNG 127
Query: 308 MIWIWPGDEPPTATIPCLLPPSGFE----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 363
IW++PGDE I LL S +E I V++ + L++NL+D+ H H
Sbjct: 128 FIWLFPGDETQAEKID-LLDLSEWEHLNYIATVSVIDCQAHYSFLIENLMDMYHG---HL 183
Query: 364 STFAKGWSVPSL 375
+ W+ P L
Sbjct: 184 HDDWQAWANPVL 195
>gi|425463589|ref|ZP_18842919.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9809]
gi|389831031|emb|CCI26511.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9809]
Length = 349
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 154/356 (43%), Gaps = 61/356 (17%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L++FW+ + LK + EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 267 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGD--- 315
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 316 EPPTATIPCLLPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 370
E +P + S F +I I + I+H ++ L+D AH P+ HTS + +
Sbjct: 125 EIKQENLPPVPIISDFGKLTPKIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWWRSG 182
Query: 371 SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 430
VK + ++P P+ P M +S +KP K+ G +
Sbjct: 183 PRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI------E 224
Query: 431 LHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHFAEQ 472
+ LPS R + R ++ F ++ + + F+ L R+ Q
Sbjct: 225 IVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYLTRQ 284
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 285 FLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|429210389|ref|ZP_19201556.1| vanillate monooxygenase [Pseudomonas sp. M1]
gi|428159163|gb|EKX05709.1| vanillate monooxygenase [Pseudomonas sp. M1]
Length = 352
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 128/335 (38%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +RG +G +++ C HR PL LG V +G+
Sbjct: 4 KNAWYVACTPDEIADKPLGRQVCGEKMVFYRGPEGRVAALEDFCPHRGAPLSLGFVEDGK 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG +G E MP ++R I+ E+ G IW+WPGD P L+
Sbjct: 64 LICGYHGLAMGCEGHTESMPGQRVRGFPAIRKFAVEERYGFIWVWPGD--AAQADPALIH 121
Query: 328 PSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------G 369
+ + + + ++ L++DNL+DL H + H ++ + G
Sbjct: 122 HLEWADNPDWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHANSIGQKEIDEAAPKTRVEG 181
Query: 370 WSV-----------PSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
V P + +GL D P+D F PP VL +G++ G
Sbjct: 182 EEVITERHMQNVMAPPFWRLALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
Q + P S + M+ +F + R ++
Sbjct: 239 HGGYHAPAQHKAASIVVDFITPESETSIWYFWGMARNFQP---QDAALTATIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
EDL ++ QQ+ + L + D GV+ R
Sbjct: 296 GEDLEMLEQQQQNLLRHPQRQLLKLNIDAGGVQSR 330
>gi|218439920|ref|YP_002378249.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218172648|gb|ACK71381.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 367
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 145/332 (43%), Gaps = 42/332 (12%)
Query: 189 LDIVKGKLPRKSLNVSGPVQPYNTRLK------NFWFPVAFSTDLKDDTMEPWVI----- 237
+ + K +L ++ QP R++ N+W+PVA+S LK + P V+
Sbjct: 1 MSVRKSELLNMESTITLSSQPVQNRVREIGINPNYWYPVAWSHQLKPCQILPVVVWQQAI 60
Query: 238 --FRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM----PSTQ 291
+R + ++N C H+ G V E + CPYHGWE++ +G+C K+ P +
Sbjct: 61 AVYRDVNHQLHALENACPHKGVVFDKGEVFETHLVCPYHGWEFNGEGECVKIPYLPPEQK 120
Query: 292 LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELP----IEHGL 347
L K ++ P E+ G+IWI+PGD P A + + + +++E+P +
Sbjct: 121 LPCAKARNYPIQEKYGIIWIFPGD-PSLAELKTIPDVPEYNESEWLIVEIPAHFQAHFSI 179
Query: 348 LLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY-------WDPYPIDMEFRP 400
+N +D+ H F H +GW P L + + + W +++
Sbjct: 180 CNENTMDVFHG-FLHRDI--QGWFNPILTQLKAKKNTVHAQYQVSYRGWLSKFLNLNKDE 236
Query: 401 PCMVLSTIGISKP-----GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL-DFAS 454
+ T+ I+ LEG ++ +L +L V L +R + L ++ L +
Sbjct: 237 NQVTTRTVSITYNYPHYHSTLEGVSS----LYLMRLPVSLTETRSFSLLFIKLRLPKWVV 292
Query: 455 VLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 486
L Q +W ++ L++D+ ++ +Q+
Sbjct: 293 NLIRGQLSQIIWHFLFKKFLDQDIEMIESEQQ 324
>gi|325916823|ref|ZP_08179074.1| vanillate demethylase subunit A [Xanthomonas vesicatoria ATCC
35937]
gi|325536974|gb|EGD08719.1| vanillate demethylase subunit A [Xanthomonas vesicatoria ATCC
35937]
Length = 387
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 25/171 (14%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 40 NAWYAVAWDHEIKH-ALTPRKVCNLEVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 98
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+T G+C MPS + N ++S P E+ +WIWPGD + TA IP
Sbjct: 99 VVCGYHGLVYNTQGRCVHMPSQETINPSACVRSFPVAEKHRYVWIWPGDPAKADTALIPD 158
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L G I+A+ ++ L+LDNL+DL H F H S+ +
Sbjct: 159 LHWAHDPAWAGDGRTIYAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 203
>gi|21241137|ref|NP_640719.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21106440|gb|AAM35255.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citri str. 306]
Length = 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTSGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|345008760|ref|YP_004811114.1| Rieske (2Fe-2S) domain-containing protein [Streptomyces
violaceusniger Tu 4113]
gi|344035109|gb|AEM80834.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Streptomyces
violaceusniger Tu 4113]
Length = 362
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGK-DGIPGCVQNTCAHRACPLHLGSVNEG 267
+N W+ A+ ++ + + EP +R + D + + C HR PL G ++
Sbjct: 15 RNQWYVAAYGREIGRELLGRTILNEPIAFYRAESDDTVIALADRCVHRRYPLTAGRLDGD 74
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD----EPPTA- 320
+ C YHG+ Y T G C +P + R ++ S P EQ+ ++W+W GD +P +
Sbjct: 75 TVVCGYHGFTYDTGGTCVFVPGQKRVPRTARVPSYPVVEQDSLVWVWIGDPALADPRSVP 134
Query: 321 TIPCLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH--------------TST 365
P L P + ME + ++GLL+DNLLDL+H + H T+
Sbjct: 135 RAPWLADPRWTTVGG---MEPIDADYGLLVDNLLDLSHETYLHSGYIGTAEVAETPITTE 191
Query: 366 FAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 416
+G V + + F ++G+ G + D+E+ PC+ L I+ G L
Sbjct: 192 VDEGAGVVRVSRHMDDAECPPFYARSTGIDGRITRWQ-DIEYHAPCLYLLHSRIAPAGVL 250
Query: 417 -EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
+ A H+ + PS+ + + +S DFA
Sbjct: 251 PRPDGSDPDAFHVEITYAITPSTDRHVYDFWAVSRDFA 288
>gi|294011169|ref|YP_003544629.1| putative Rieske protein [Sphingobium japonicum UT26S]
gi|292674499|dbj|BAI96017.1| putative Rieske protein [Sphingobium japonicum UT26S]
Length = 430
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 142/352 (40%), Gaps = 44/352 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LK W+ A S+++ + +IFR G +Q+ C HR PL +GS
Sbjct: 76 LKRAWYVAALSSEVDATQLFHRRILGMSVLIFRDAQGEAVALQDRCPHRFAPLSMGSRVG 135
Query: 267 GRIQCPYHGWEYSTDGKCEKMP--STQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
I CPYHG + G C P QL R ++ P E+ G IWIW +E A P
Sbjct: 136 DAIACPYHGLRFDAGGHCVHNPHGRGQLPRGQVVRGFPLIERHGFIWIWMAEE---AADP 192
Query: 324 CLLPPSG--FEIHAEIV----MELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 376
LLP HA V M+LP+++ L+LDN++DL+H + H +G P +
Sbjct: 193 ALLPDFSPLDRGHANGVGHTYMKLPVDYRLILDNVMDLSHVDYVHGEIITTRGQLSPLIP 252
Query: 377 KFLTPASGLQGYWD-----PYPIDMEF--RPPCMVLSTIGI--SKPGKLE-----GQNTR 422
+ + + WD P I F RP +I + + P ++ Q+
Sbjct: 253 QVEETENSVSASWDYSQTPPIGIFAPFLPRPEEAARHSIRVTWTAPANIQLSIAAAQDDA 312
Query: 423 QCATHLHQ--LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 480
+ Q LH C P +T + + A + H A + ED +
Sbjct: 313 PFEQGISQYDLHSCTPGDENETHYFFATRRNHAEEDGDYNAFKTAAMHAAFET--EDGPI 370
Query: 481 VLGQQERMNNGANVWNL-PV----GYDKLGVRYRLWRDALEKGAKQLPFMKP 527
+ Q M G + ++L P+ + VR RL R +GA +L P
Sbjct: 371 IAAAQREM-GGEDFFDLKPMLLSNDLAAVKVRRRLQRAVELEGAMELEDATP 421
>gi|326328839|ref|ZP_08195174.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase)
[Nocardioidaceae bacterium Broad-1]
gi|325953370|gb|EGD45375.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase)
[Nocardioidaceae bacterium Broad-1]
Length = 367
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 118/294 (40%), Gaps = 49/294 (16%)
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
P ++R DG + + C HR PL G V IQCPYHG Y++ G+C MP+ +
Sbjct: 46 PLALWRNSDGRAVALADACWHRLAPLSKGKVLGDEIQCPYHGLRYNSAGRCTSMPAQETI 105
Query: 294 N--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP-----------SGFEIHAEIVME 340
N + S P E+ +W+W GD P P +P G I+A
Sbjct: 106 NPSAIVPSYPVVERYRYVWVWVGD--PDLADPATVPDMHQMDSPDWAGDGETIYA----- 158
Query: 341 LPIEHGLLLDNLLDLAHAPFTHTSTFAKG------WSVPSLVKFLT----------PASG 384
P + L+LDNL+DL H F H+S+ + + V + +T P
Sbjct: 159 -PCNYQLVLDNLMDLTHEEFVHSSSIGQDELSEAEFEVSHDDRHVTVTRWMRDIDAPPFW 217
Query: 385 LQGYWDPYP-----ID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCL 435
L+ D +P +D + F P + +G++K G + R + ++
Sbjct: 218 LKNMRDKFPGFTGKVDRWQIIHFEAPSTICIDVGVAKAGTGAPEGDRSQGVNGFVMNTIT 277
Query: 436 PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 489
P + + + + ++ L+ L R V ED ++ QQ ++
Sbjct: 278 PETARTSHYFWAFMRNYR--LESQTITTQL-RQGVHGVFGEDEEMLAAQQRAID 328
>gi|388565620|ref|ZP_10152105.1| rieske (2fe-2S) iron-sulfur domain protein [Hydrogenophaga sp. PBC]
gi|388267188|gb|EIK92693.1| rieske (2fe-2S) iron-sulfur domain protein [Hydrogenophaga sp. PBC]
Length = 366
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 41/237 (17%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++ + + V++R DG +++ C HR PL LG + +
Sbjct: 11 NAWYAAAYDVEVGRSLLARTVCNQKLVLYRQTDGRLAALEDACWHRLLPLSLGRLEGDEV 70
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG Y+ +G+C MPS + N ++ P E+ +WIWPGD P L+P
Sbjct: 71 VCGYHGLVYNAEGRCTHMPSQETINPAACVRRFPVAEKHRFVWIWPGD--PALADEALIP 128
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------GW 370
+ E ++ + ++ L++DNL+DL H F H S+ G
Sbjct: 129 DLHWNHDPEWAGDGKMIRVKCDYRLVVDNLMDLTHETFVHGSSIGNRAVAEAPFVATHGE 188
Query: 371 SVPSLVKFLT-------------PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 414
++ +++ A G G D + I + F PC V +G++ G
Sbjct: 189 RTATVTRWMENIEAPPFWAGQIRQARGYTGPVDRWQI-IRFEAPCTVAIDVGVAPTG 244
>gi|409096514|ref|ZP_11216538.1| Rieske (2Fe-2S) domain-containing protein [Thermococcus zilligii
AN1]
Length = 319
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 139/331 (41%), Gaps = 57/331 (17%)
Query: 218 WFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
WF + S +++ D V++R ++G ++++C HR L G V GR+Q
Sbjct: 2 WFAILSSKEVRKDRPVGVVRFGRNIVLWRDENGKVNAIEDSCVHRRARLSAGKVINGRLQ 61
Query: 271 CPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
CP+HG+EY DG+ + +P+ +K+ E+ GMIW+W G+ P
Sbjct: 62 CPFHGFEYDGDGRVKLIPALGRSYRVPERFSVKAYNVAEKAGMIWMWFGEGEPGGE---- 117
Query: 326 LPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 379
P FE AEI + ++N LD+ H PF H +T +G
Sbjct: 118 --PRFFEDIDKKFACAEIQETWNVPFPRAVENQLDVMHLPFVHRTTIGRGNR-------- 167
Query: 380 TPASGLQGYWDPYPIDME---FRPPCMVLSTIGISKPGKLEGQNTR-------------Q 423
T +G W ID + F V KPG+LEG +R
Sbjct: 168 TLVNGPVVKW----IDGDSFVFYVFNEVDRGQIAKKPGELEGLESRVYLEFIFPNVWQNH 223
Query: 424 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 483
+ + + +P +++KT + R + + + L F + VL++D R+V
Sbjct: 224 ISEKVRVVAFFVPVTKEKTMIYLRFYIKATGIRPLDRLIAKLGMRFNKVVLHQDRRVVET 283
Query: 484 QQERMNNGANVW-NLPVGYDKLGVRYRLWRD 513
Q+ + + V +LP+ + R RL+R+
Sbjct: 284 QEWDIRKDSLVQGDLPI----MEFRKRLYRE 310
>gi|385674800|ref|ZP_10048728.1| oxidoreductase subunit alpha [Amycolatopsis sp. ATCC 39116]
Length = 348
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 116/277 (41%), Gaps = 40/277 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+++ W+ A+ +++ + + EP V +R + G + + C HR PL ++
Sbjct: 5 VRDQWYVAAYGSEVGRELLARTILGEPIVFYRTEAGEVVALADRCVHRRYPLSESRLDGD 64
Query: 268 RIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
RI C YHG+ Y G C +P S R ++ S P EQ+ +W+W GD P L
Sbjct: 65 RIVCGYHGFTYEPSGSCVFVPGQSRIPRTARVPSYPVVEQDSFVWVWIGD--PARADATL 122
Query: 326 LPPSGFEIHAEIV----ME-LPIEHGLLLDNLLDLAHAPFTHTSTF-------------- 366
+P + + ME L + LL+DNL+DL+H + H
Sbjct: 123 IPRAPWLADPAYTTVCGMEPLAARYDLLVDNLMDLSHETYLHGGYIGTPEVANTPITTEV 182
Query: 367 ---------AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL- 416
++ + F ++G+QG + D+E+ PPC+ L I+ G L
Sbjct: 183 DEDRRIIYVSRHMDDAACPPFYAKSTGIQGRITRWQ-DIEYHPPCLYLLHSRIAPVGVLP 241
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
T H+ ++ P + T + ++ DFA
Sbjct: 242 NADGTDPEGFHVEVVYAITPETEHSTHDFWAVARDFA 278
>gi|383773856|ref|YP_005452922.1| vanillate O-demethylase oxygenase iron-sulfur subunit
[Bradyrhizobium sp. S23321]
gi|381361980|dbj|BAL78810.1| vanillate O-demethylase oxygenase iron-sulfur subunit
[Bradyrhizobium sp. S23321]
Length = 349
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 124/314 (39%), Gaps = 52/314 (16%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++K + + V++R DG +++ C HR PL G + +
Sbjct: 8 NAWYAAAWDAEVKPALLPRTICGKHVVMYRKADGAVAALEDACWHRLVPLSKGRLEGDTV 67
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG +Y++ G+C MPS + N +++ P E+ IW+W GD P P L+P
Sbjct: 68 VCGYHGLKYNSQGRCTFMPSQETINPSACVRAYPVVERHRYIWLWMGD--PALADPALVP 125
Query: 328 P-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--------- 367
G IH ++ L+LDNL+DL H F H S+
Sbjct: 126 DMHWNHDPAWAGDGKTIHVN------CDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAPF 179
Query: 368 ------KGWSVPSLVKFLTPAS------GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 415
K +V ++ + P G G D + I + F PC + +G++ G
Sbjct: 180 DVTHGEKTVTVTRWMRGIEPPPFWAKQLGKSGLVDRWQI-IRFEAPCTIAIDVGVAPTGT 238
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
+ R + L+ P + K + ++ + + R +
Sbjct: 239 GAPEGDRSQGVNGFVLNTITPETEKTCHYFWAFVRNYRIGEQRITTEI---REGVSGIFR 295
Query: 476 EDLRLVLGQQERMN 489
ED ++ QQ M+
Sbjct: 296 EDELILEAQQRAMD 309
>gi|299530152|ref|ZP_07043578.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
gi|298721809|gb|EFI62740.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
Length = 354
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 127/311 (40%), Gaps = 46/311 (14%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A S++L D + E V+FR DG +++ C HRA PL G+V +
Sbjct: 23 NQWYVAAHSSELADKPVGRKLLGEAVVLFRIGDGTVAALEDRCCHRALPLSAGTVESCGL 82
Query: 270 QCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+C YHG Y+ +GKC ++P + K+ + E++G+IWIW G +P C P
Sbjct: 83 RCGYHGLLYNHEGKCVEIPGQEKIPTKAKVSAYHVQERDGLIWIWFG-KPENPEPMCDAP 141
Query: 328 PSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFAKGWSVP--------- 373
E V + H L+ DNLLDL+H + H T +
Sbjct: 142 SYSVHSSPEYVYGGDVYHYNAPYQLIHDNLLDLSHLGYVHLHTIGGNAKLHMNAEMKVES 201
Query: 374 -----SLVKFLTPASGLQGYWDPYPI--------DMEFRPPCMVLSTIGISKPGKLEGQN 420
+V+++ + Y YP ++EFR +++ T G G +
Sbjct: 202 EGDFVRVVRYMPDSVPPPTYSAAYPFKGNVDRWQEIEFRVSHLLIWT-GAVDQGTDAMDD 260
Query: 421 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ---VLNED 477
++ H+ H P S + M+ + A ++ V R EQ +ED
Sbjct: 261 PQRGGFHMRGFHGVTPESETTCHYFWTMATNPAKDVEEVK------RKVLEQTELTFDED 314
Query: 478 LRLVLGQQERM 488
++ Q + M
Sbjct: 315 KVVIEAQYQNM 325
>gi|377807933|ref|YP_004979125.1| vanillate monooxygenase [Burkholderia sp. YI23]
gi|357939130|gb|AET92687.1| vanillate monooxygenase [Burkholderia sp. YI23]
Length = 349
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 115/279 (41%), Gaps = 52/279 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ A+S ++ + EP +++R DG P + + C HR PL +G
Sbjct: 4 LRNIWYAAAWSHEIDESFATRELLGEPMLLYRKHDGTPVAMIDRCPHRFAPLSMGKRVGD 63
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YHG + G C P R ++++ P + G++W+WPGD P A I
Sbjct: 64 SVECGYHGLRFDCSGACTLNPHGDGRIPQAARVRTFPVVDLHGLVWLWPGD-PARADI-G 121
Query: 325 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHT---------------- 363
L+P G + + M + L++DNL+DL+H + H
Sbjct: 122 LIPDCGHLVSPRLKTIGDQMIHQAHYELVVDNLMDLSHVNYVHAPYQQVDDFLRAKHDVV 181
Query: 364 ---STFAKGWSVP------SLVKFLTPASGLQGYWDPYPIDMEFRPP-CMVLSTIGISKP 413
+T +VP S FL YW +++ + P C VL T G+
Sbjct: 182 QTGATLESRRTVPSTRAPQSFRPFLADPDAPVEYW----LNIRWHAPGCCVLET-GVVPI 236
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 452
G+ + THL P + TR +Y S ++
Sbjct: 237 GEPRENGLVRIGTHL-----VTPITASSTRYVYASSRNY 270
>gi|114327153|ref|YP_744310.1| Rieske (2Fe-2S) domain-containing protein [Granulibacter
bethesdensis CGDNIH1]
gi|114315327|gb|ABI61387.1| rieske [2Fe-2S] domain protein [Granulibacter bethesdensis CGDNIH1]
Length = 350
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+P+A+S +++ EP V+ RG+ G +++ CAHR PLH G V
Sbjct: 23 DYWYPLAWSGEIRKGKATGRHFAGEPIVLVRGESGRVYALEDRCAHRQVPLHAGVVEGDC 82
Query: 269 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
++C YHGW Y G+C +P +L N +++ PC E+EG+++I+PGD P
Sbjct: 83 LRCCYHGWTYDMSGRCIDVPYLGKDKLPN-GVRAYPCQEKEGLVFIFPGDAARAEMTPLP 141
Query: 326 LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
+ PS + E+ + + +NL+D+ H F H +
Sbjct: 142 VLPSISDPAYRTRRFGREVACHYSFMHENLIDMNHQ-FLHRKQMGQ 186
>gi|390570113|ref|ZP_10250385.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia terrae
BS001]
gi|420250160|ref|ZP_14753385.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|389938000|gb|EIM99856.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia terrae
BS001]
gi|398062256|gb|EJL54036.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 374
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 17/167 (10%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+ W+P+A+S ++K EP V+ R + G +++ CAHR PL G V+
Sbjct: 31 DHWYPLAWSREVKRGKTHAVRFAGEPIVLARSESGKVFALEDRCAHRQVPLSGGVVDGEA 90
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
I+C YHGW Y GKC +P + +++ PC E EG+I+++PGD T+P L
Sbjct: 91 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRAYPCREAEGLIFVFPGDAALAETMP--L 148
Query: 327 PPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
PP G E+ + + +NL+D+ H F H K
Sbjct: 149 PPLGSVADKAYKTRRFGREVACHYSFMHENLMDMNHQ-FLHRKQMGK 194
>gi|443474699|ref|ZP_21064670.1| Pheophorbide a oxygenase [Pseudanabaena biceps PCC 7429]
gi|443020589|gb|ELS34534.1| Pheophorbide a oxygenase [Pseudanabaena biceps PCC 7429]
Length = 480
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 52/320 (16%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVIFRGKDGIP---------GCVQNTCAH 254
+G P + W+PV + DL D T +D + + C H
Sbjct: 31 AGGRDPDRFDWQEVWYPVFYLEDL-DKTKPAKFTLLERDLVIWWDRHSNAWQAFDDRCPH 89
Query: 255 RACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQE 306
R PL G + E G ++CPYHGW + DG C+++P + + + SLP E++
Sbjct: 90 RLVPLSEGRIAEDGLLECPYHGWAFKGDGSCDRIPQQPEGGTAHTSKRACVSSLPTAERQ 149
Query: 307 GMIWIWPG--DEPPTATIPCLLPPSGFEIHAE------IVMELPIEHGLLLDNLLDLAHA 358
G+++I+ G + P IP + P E + +LP + LL+N+LD +H
Sbjct: 150 GLLFIYAGKPENAPQVKIPIIEP---LETETDKWTLFGTFRDLPYDAITLLENVLDASHL 206
Query: 359 PFTHTSTFA-KGWSVPSLVKFL-TPASGLQGYWDPYP-------IDMEFRPPCMVLSTIG 409
PFTH + + + P ++ L T G +G W+ P D F P ++ +
Sbjct: 207 PFTHHKSVGNRANAAPMFLEVLETEKYGFKGTWEEGPRRGKLGRQDTTFIAPSLMWHDL- 265
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWR 467
++Q + ++ P+ + + RL R F+S + + +
Sbjct: 266 ----------TSKQFGRTITAVYAT-PTRKGECRLFARFPFQFSSAIPRFFIGITPRWYS 314
Query: 468 HFAEQVLNEDLRLVLGQQER 487
H + + ED ++ L QER
Sbjct: 315 HIGQNGILEDDQIFLHYQER 334
>gi|428771559|ref|YP_007163349.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
gi|428685838|gb|AFZ55305.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
Length = 444
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 146/346 (42%), Gaps = 54/346 (15%)
Query: 218 WFPVAFSTDLKDDTMEPW-------VIFRG-KDGIPGCVQNTCAHRACPLHLGSVNE--G 267
W+P+ DL+ + + + VI++G K + C HR PL G ++E G
Sbjct: 11 WYPIFPLEDLEINKPQSFTLLGQRLVIWKGEKQKKFQVFLDLCPHRLAPLSEGRIDEETG 70
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLR--------NVKIKSLPCFEQEGMIWIWP------ 313
+ C YHGW+++ G C +P + + N +K P E+ ++W+W
Sbjct: 71 NLMCSYHGWQFNEKGICTCIPQAENQELVVKNQHNFAVKVFPTREENDLLWVWADANTPD 130
Query: 314 -GDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWS 371
++ P P + GF + + +V +L + ++N+ D +H PF H + +
Sbjct: 131 LAEKKPLPLSPQIDKERGF-VWSSMVRDLEYDWQTFIENVADPSHVPFAHHGLQGNRKQA 189
Query: 372 VPSLVKFLTPASGL--QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 429
P ++ + + L + + F PP + IG G+ G T
Sbjct: 190 QPIAIEIVKSSVNLIEAKVSRLFTTTITFEPPSRLEYAIGFGDKGQQLGLIT-------- 241
Query: 430 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLVLGQQER 487
C+P K R++ + + +FA L + W H + VL+ D+ ++L QQER
Sbjct: 242 ---YCIPIEPGKCRIVAQFARNFAYSLHKI--TPRWWEHIKTRNAVLDGDM-ILLHQQER 295
Query: 488 M-------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 526
N N + +P D+L + +R W D +G +LP+ K
Sbjct: 296 FLQQKLAGENWKNSYKMPTKADRLVIEFRRWFDIYCEG--KLPWEK 339
>gi|397615617|gb|EJK63540.1| hypothetical protein THAOC_15793 [Thalassiosira oceanica]
Length = 883
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 24/173 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN- 265
+ W+ VA+ +K+ + EP V++R DG C ++ C HR+ PL +G +N
Sbjct: 392 FNDHWYAVAYPWQVKEGEVFATRLWGEPLVLYRDSDGNLVCSKDVCPHRSAPLSMGKIND 451
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-----------IKSLPCFEQEGMIWIWPG 314
EG+++C YHGW + DG E +P TQ+R+ +K+ E EG+IWIW G
Sbjct: 452 EGQLECMYHGWGFGKDGNIESIP-TQIRDGGSSKRSPPKRSCLKTYCVEEHEGLIWIWRG 510
Query: 315 D--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST 365
+ E + +P S + I + V++ ++ +++N LD H + H +
Sbjct: 511 ELLEADASKLPKTRDVSTYPI--DTVLDYNVDWQYIVENNLDSPHLFWLHNGS 561
>gi|383648311|ref|ZP_09958717.1| oxidoreductase subunit alpha [Streptomyces chartreusis NRRL 12338]
Length = 353
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 49/283 (17%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKD-GIPGCVQNTCAHRACPLHLG--SVN 265
+N W+ A+S ++ + + E V++R ++ G P + + C HR PL ++
Sbjct: 6 RNQWYVAAYSHEVGRELLGRTILGETLVLYRTEEEGTPVVLHDRCVHRRYPLSEAPTRLD 65
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P P
Sbjct: 66 GDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVVEQDSLIWVWIGD--PALADP 123
Query: 324 CLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------- 362
+P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 124 QSIPRARHLDSPGWVTVRG---MEPIDCDYGLLVDNLLDLSHETYLHGGYIGTPEVAETP 180
Query: 363 -TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
T+ +G + + + F ++G++G + D+E+ PC+ L I+
Sbjct: 181 ITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSRIAP 239
Query: 413 PGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 454
G L E + H + PS K + +S D+A+
Sbjct: 240 VGVLPEPDGSDPNGFHTEITYAITPSGDGKVYDFWAVSRDWAT 282
>gi|340786276|ref|YP_004751741.1| Rieske (2Fe-2S) domain-containing protein [Collimonas fungivorans
Ter331]
gi|340551543|gb|AEK60918.1| Rieske (2Fe-2S) domain protein [Collimonas fungivorans Ter331]
Length = 344
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ A S ++K + E V++R +++ CAHR PL G +
Sbjct: 3 IQNAWYAAALSGEIKSEPFARTILNEKIVMYRTSANQVVALEDRCAHRQVPLSRGRLIGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPG--DEPPTATIP 323
+QC YHG Y G+C +P ST + +++S P E+ G +W+WPG D+ + IP
Sbjct: 63 ELQCWYHGLRYDCSGECVNIPSQSTIPKGARVRSFPAVEKHGFVWLWPGDPDQADESAIP 122
Query: 324 CLLPPSGFEIHAEI-VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
S E+ + + + +DN+LD++HA F H T
Sbjct: 123 NHWVCSAPELAGTMSYCTIACNYVFGIDNILDISHAAFVHAKTLGS 168
>gi|152981997|ref|YP_001354194.1| hypothetical protein mma_2504 [Janthinobacterium sp. Marseille]
gi|151282074|gb|ABR90484.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 354
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 144/365 (39%), Gaps = 72/365 (19%)
Query: 195 KLPRKSLNVSGPVQPYN----TRLKNFWFPVAFSTDLKDD-----TMEPWVIFRGKDGIP 245
+L + ++GP P N L+ FW PVA++++L D ++ ++ +G+
Sbjct: 3 ELSNIGVTMTGPHDPANHPLYRALRRFWHPVAYASELGDTPLAVTLLDQSLVLARLNGVV 62
Query: 246 GCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLP 301
+ + C H+ L LG + +G I+CPYHGW Y GKC ++P+ + + +
Sbjct: 63 TALDSRCPHKGTSLALGQIVDGTIECPYHGWRYDDGGKCVRVPAREELCDVLKASVAKYH 122
Query: 302 CFEQEGMIWIWPGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 359
E G+IW+ E P P + + + + L+N +D AH
Sbjct: 123 AAEHVGIIWV--ALEEPLYAFPDFPEFEDAEYNVLQGTSYDWATSSPRRLENFVDFAHFS 180
Query: 360 FTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG----- 414
F H T S P + P+D+ P + + G+ +PG
Sbjct: 181 FVHDGTIGSR-SNPRV----------------EPVDVWREGPVLRFNRSGVKEPGVGLKK 223
Query: 415 KLEGQNTRQCATHLHQLHVCLPS-----------------------SRKKTRLLYRMSLD 451
+L G T +++ HV +P + +TR + ++ D
Sbjct: 224 ELLGI-TDALIEPVNEYHVTMPHTVHLKRIFPNGKRYVLFMSASPVTATQTRSFWWIARD 282
Query: 452 FASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGAN----VWNLPV-GYDKLGV 506
F + KH F R F ++VL +D ++ Q+ N A P+ G D + +
Sbjct: 283 FGTDTKHDAFF----RDFEDEVLGQDKPIIESQRPLWFNLAGGDPAQRETPMRGADVVTI 338
Query: 507 RYRLW 511
YR W
Sbjct: 339 EYRRW 343
>gi|166367445|ref|YP_001659718.1| Rieske 2Fe-2S family protein [Microcystis aeruginosa NIES-843]
gi|166089818|dbj|BAG04526.1| rieske 2Fe-2S family protein [Microcystis aeruginosa NIES-843]
Length = 349
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 154/359 (42%), Gaps = 67/359 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L++FW+ + LK + EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 267 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 316
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 317 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
PP TI L P ++ I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTIADFGKLTP---KVAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 368 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 427
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRQFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGSKVSI---- 223
Query: 428 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 469
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 470 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|443323888|ref|ZP_21052865.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
gi|442796320|gb|ELS05613.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
Length = 469
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 127/309 (41%), Gaps = 30/309 (9%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVIFR--------GKDGIPGCVQNTCAHR 255
+G + + +K W+PVA+ DL + + K + C HR
Sbjct: 12 AGGTEATSFDVKEAWYPVAYLDDLDKTKPTTFTLLEIDLVLWWDAKSQSWRAFVDQCPHR 71
Query: 256 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKS-------LPCFEQEG 307
L G +NE G ++CPYHGW +S G CE +P N S P +G
Sbjct: 72 LASLSEGRINEQGLLECPYHGWSFSGSGNCEDIPQQSATNQANTSKRACATAYPTQTAQG 131
Query: 308 MIWIWPGDEPPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
+++++PG +P + E + ++ +LP + LL+N+LD++H P+TH
Sbjct: 132 LLFVYPGKAAMANQVPVPIVEPIEESPEEWVCLDLFRDLPYDALTLLENVLDVSHVPYTH 191
Query: 363 TSTFAKGWSVPSLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 420
T +K + + +T + +G QG W+ P E T I+
Sbjct: 192 HKTVSKRSNAAPVDLAVTQSDKNGFQGVWEEGPRKGELG----TQYTSFIAPSLMWHDLT 247
Query: 421 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDL 478
++Q L ++ P + + RL R FAS + + + H + + ED
Sbjct: 248 SKQFGRTLTVVYAT-PIRKGQCRLFARFPFKFASPIPAFFIKLTPRWYSHVNQHTVLEDD 306
Query: 479 RLVLGQQER 487
++ L QER
Sbjct: 307 QIFLHHQER 315
>gi|381171298|ref|ZP_09880445.1| rieske [2Fe-2S] domain protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380688215|emb|CCG36932.1| rieske [2Fe-2S] domain protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 358
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|423696631|ref|ZP_17671121.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
gi|388003531|gb|EIK64858.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
Length = 357
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 212 TRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
+ L N W+ ++ +L M +P V FR G + + C HR PLH+G +
Sbjct: 2 SYLLNTWYIAGWADELAQGGMLGRTIVEQPIVFFRNSQGAIQALADRCPHRFAPLHMGKI 61
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
+QCPYHG + G+C P + + +++ E+ G IW+WPGD P
Sbjct: 62 VGDSVQCPYHGLRFDGSGQCTHNPHGDGSIPKAACVRAFAVAERHGAIWVWPGD--PNLA 119
Query: 322 IPCLLPPSGFEIHAEIVME----LPI--EHGLLLDNLLDLAHAPFTHTSTFAKG 369
L+P F A + LP + LL DN++DL+H F H T G
Sbjct: 120 NDALIPDFSFFEQAPTDAKGHGYLPTRAHYELLADNIMDLSHVDFLHPDTLGGG 173
>gi|219130881|ref|XP_002185582.1| Tic55 component of chloroplast import machinery [Phaeodactylum
tricornutum CCAP 1055/1]
gi|217402990|gb|EEC42947.1| Tic55 component of chloroplast import machinery [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 498
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 143/346 (41%), Gaps = 57/346 (16%)
Query: 218 WFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVN--EGR 268
W P+A +L D P +V ++ DG + C HR PL G V+ + R
Sbjct: 61 WVPLASVYELHPDRPTPLRFLGQSYVTYQSNDGQWAVFDDACPHRLAPLSEGRVDRQKNR 120
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK---------IKSLPCFEQEGMIWIWP-GDEPP 318
++C YHGWE+ DG+C+++P ++ +KS P ++ ++++WP DE P
Sbjct: 121 LECSYHGWEFDADGRCQEIPQADFSTMQKAMQNERCHVKSYPVHVEKNILFVWPWADEDP 180
Query: 319 TATI--PCLLPPSGFEIHAE----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW-S 371
T+ P P E +E +LP LL+N++D +H PF H K +
Sbjct: 181 LITVSQPHCAPEHFMEGVSENCTTYTRDLPYGWDTLLENIVDPSHVPFAHHGLQGKREDA 240
Query: 372 VPSLVKFLTPA----SGLQGYWDPYPIDME------FRPPCMVLSTIGISKPGKLEGQNT 421
+P + +P+ G ++ + M FR P ++ P K E Q
Sbjct: 241 IP--INMTSPSDLSPEGFVFQFEDRTMSMRRQGGAVFRAPFVIHYKADFETPSK-EKQKK 297
Query: 422 RQCATHLHQL-HVCLPSSRKKTRLLY------------RMSLDFASVLKHVPFMQYLWRH 468
R + + L + LP+ +R++ A + + +P +L
Sbjct: 298 RANSPKVFNLTAIMLPTKPGWSRIILMGAPRTKQIEKKEKERLVAKIFRKLP--SWLVHT 355
Query: 469 FAEQVLNEDLRLV-LGQQERMNNG--ANVWNLPVGYDKLGVRYRLW 511
F+ + L+ DL + +QER G A + +P D+ R W
Sbjct: 356 FSNRFLDSDLAFLHFQEQERERRGVDARAYFMPAQSDRCVSALRKW 401
>gi|346723290|ref|YP_004849959.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citrumelo F1]
gi|346648037|gb|AEO40661.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citrumelo F1]
Length = 358
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGTVVALEDACWHRLVPLSMGKLRGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWAHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|28870083|ref|NP_792702.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato str. DC3000]
gi|422656822|ref|ZP_16719266.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. lachrymans str. M302278]
gi|28853329|gb|AAO56397.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato str. DC3000]
gi|331015362|gb|EGH95418.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. lachrymans str. M302278]
Length = 354
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 132/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPG+ P L+
Sbjct: 64 LVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAIERYGFIWVWPGEREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVITARHMENIMPPPFWKMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK + + P + + M+ +F + + R +
Sbjct: 237 AGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFKPADEQ---LTATIREGQHK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ +EDL ++ QQ + + L + D GV+ R
Sbjct: 294 IFSEDLEMLERQQLNLLQHPHRNLLKLNIDAGGVQSR 330
>gi|425442274|ref|ZP_18822528.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9717]
gi|389716788|emb|CCH99015.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9717]
Length = 460
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 129/339 (38%), Gaps = 57/339 (16%)
Query: 215 KNFWFPVAFSTDLK------------------DDTMEPWVIFRGKDGIPGCVQNTCAHRA 256
+ W+P+ + DL D + W +F K C HR
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDK----------CPHRL 70
Query: 257 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGM 308
PL G +NE G ++CPYHGW +S G CE +P + R ++S P ++G+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 309 IWIWPGD--EPPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 363
++++ G+ P IP + P + I + +LP L++N++D +H P+TH
Sbjct: 131 LFVYAGNPENAPLTAIPIIEPMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHH 190
Query: 364 STFA-KGWSVPSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
T + + P ++ + + G +G W P R + PG + T
Sbjct: 191 LTIGNRANAAPMELEIIESNRQGFKGIWPEGP-----RKGKLGQQYSNFIAPGFIYHDLT 245
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLR 479
+ P + + RL R F S L + + H + + ED +
Sbjct: 246 SEKFGRTLTAVYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQ 305
Query: 480 LVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
+ L QER N + LP D YR W
Sbjct: 306 IFLYYQERYLQAQGDSRNFSQACYLPTKADLFVFEYRNW 344
>gi|330808946|ref|YP_004353408.1| vanillate monooxygenase subunit [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377054|gb|AEA68404.1| putative vanillate monooxygenase, subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 357
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 212 TRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
+ L N W+ ++ +L M +P V FR G + + C HR PLH+G +
Sbjct: 2 SYLLNTWYIAGWADELAQGGMLGRTIVEQPIVFFRNSQGAIQALADRCPHRFAPLHMGKI 61
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
+QCPYHG + G+C P + + +++ E+ G IW+WPGD P
Sbjct: 62 VGDSVQCPYHGLRFDGSGQCTHNPHGDGSIPKAACVRAFAVAERHGAIWVWPGD--PNLA 119
Query: 322 IPCLLPPSGFEIHAEIVME----LPI--EHGLLLDNLLDLAHAPFTHTSTFAKG 369
L+P F A + LP + LL DN++DL+H F H T G
Sbjct: 120 NDALIPDFSFFEQAPTDAKGHGYLPTRAHYELLADNIMDLSHVDFLHPDTLGGG 173
>gi|325919763|ref|ZP_08181759.1| vanillate demethylase subunit A [Xanthomonas gardneri ATCC 19865]
gi|325549749|gb|EGD20607.1| vanillate demethylase subunit A [Xanthomonas gardneri ATCC 19865]
Length = 358
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 25/171 (14%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-ALAPRKVCNLDVVLYRSTAGAVIALEDACWHRLVPLSMGKLRGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+T G+C MPS + N ++S P E+ +WIWPGD + T+ IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQETINPSACVRSFPVAEKHRYVWIWPGDPAQADTSLIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L G I+A+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWAHDPAWAGDGRTIYAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|357030860|ref|ZP_09092804.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter
morbifer G707]
gi|356415554|gb|EHH69197.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter
morbifer G707]
Length = 376
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 19/168 (11%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+PVA+S +LK +P + R DG +++ CAHR PL LG V+
Sbjct: 42 DYWYPVAWSRELKRGKTIGTRYAGQPIALVRPMDGKVFALEDRCAHRQVPLSLGKVSGEA 101
Query: 269 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QC YHGW Y G+C +P +L N +++ PC EQ+G+I+I+PGD ++P
Sbjct: 102 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPCREQDGLIFIFPGDPAKADSVP-- 158
Query: 326 LPPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P G ++ + + +NL+D+ H F H+ +
Sbjct: 159 FPKLGSVADPAYKTRRFGEKVNCHYSFMHENLMDMNHQ-FMHSKQMGQ 205
>gi|421674174|ref|ZP_16114109.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC065]
gi|421690706|ref|ZP_16130374.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-116]
gi|445487023|ref|ZP_21457644.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AA-014]
gi|404564084|gb|EKA69276.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-116]
gi|410384935|gb|EKP37433.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC065]
gi|444769250|gb|ELW93447.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AA-014]
Length = 358
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IWIWPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWIWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|298489953|ref|YP_003720130.1| Rieske (2Fe-2S) domain-containing protein ['Nostoc azollae' 0708]
gi|298231871|gb|ADI63007.1| Rieske (2Fe-2S) iron-sulfur domain protein ['Nostoc azollae' 0708]
Length = 353
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 23/193 (11%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
N L+N W+ S LK M EP ++ R KDG V++ C HRA PL G
Sbjct: 5 NILLRNIWYYALPSYLLKPGKMVAKILLEEPILLIRNKDGQVSAVRDICPHRAVPLSCGR 64
Query: 264 VNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGD-- 315
N ++C YHGW + G+C ++PS T L ++S P E +G IWI+ D
Sbjct: 65 FNGQEVECCYHGWRFDPKGRCVEIPSLLPEQNTDLSRFDVQSYPIQETQGNIWIYMSDGD 124
Query: 316 ----EPPTATIPCLLPPSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAKG 369
P +P + + H V+ P I+H + L+D AH+P+ H + +
Sbjct: 125 KYKPSPVENEVPIVSGVIEQQPHLVEVIRFPCFIDHA--VTGLMDPAHSPYVHRVWWWRS 182
Query: 370 WSVPSLVKFLTPA 382
+ VK P+
Sbjct: 183 GELHEEVKEFDPS 195
>gi|390991190|ref|ZP_10261461.1| rieske [2Fe-2S] domain protein [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372554091|emb|CCF68436.1| rieske [2Fe-2S] domain protein [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 353
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|359780082|ref|ZP_09283308.1| vanillate monooxygenase [Pseudomonas psychrotolerans L19]
gi|359371394|gb|EHK71959.1| vanillate monooxygenase [Pseudomonas psychrotolerans L19]
Length = 352
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 135/356 (37%), Gaps = 59/356 (16%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +++D + EP V +R G +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDEVQDKPLGRQICGEPLVFYRDAKGQVVALEDFCPHRGAPLSLGFVRDGT 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG E GK MP ++ ++ E+ G +W+WPGD+ P L+P
Sbjct: 64 LVCGYHGLEMGCGGKTLGMPGQRVGVFPAVRPYAAVERHGFVWVWPGDQ--AKADPTLIP 121
Query: 328 -----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------- 368
S + + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 HLEWAESPDWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPATRVEG 181
Query: 369 ----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
S P + +GL D P+D F PP V+ +G++ G
Sbjct: 182 DEVITSRHMENISAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFMQYLWRHFA 470
+ P + + M+ +F A + + R
Sbjct: 239 HGGYDAPAAVKAASVVVDFITPETETSIWYFWGMARNFKPDDAELTASI-------REGQ 291
Query: 471 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD---ALEKGAKQLP 523
++ EDL ++ QQ+ + L + D GV+ R D A E+ A +P
Sbjct: 292 GKIFGEDLEMLERQQQNLLRYPERGLLKLNIDAGGVQSRQIIDRLLAAEQAATGIP 347
>gi|262279727|ref|ZP_06057512.1| vanillate O-demethylase oxygenase subunit [Acinetobacter
calcoaceticus RUH2202]
gi|262260078|gb|EEY78811.1| vanillate O-demethylase oxygenase subunit [Acinetobacter
calcoaceticus RUH2202]
Length = 358
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IWIWPG++ L
Sbjct: 63 NLVCGYHGLVMDCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWIWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|434388645|ref|YP_007099256.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428019635|gb|AFY95729.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 462
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 144/341 (42%), Gaps = 64/341 (18%)
Query: 218 WFPVAFSTDLKDDTMEPWVIFRGKDGIPGCVQNTCAHRA----CPLHLGSVNEGRI---- 269
W+PV + DL T P+ + +D + RA CP L ++EGRI
Sbjct: 26 WYPVFYIEDLDKLTPTPFTLL-DRDLVIWWDTQASQWRAFDDRCPHRLARLSEGRIAEDG 84
Query: 270 --QCPYHGWEYSTDGKCEKMPSTQLRNVK--------IKSLPCFEQEGMIWIWPG----- 314
+CPYHGW ++ +G C+++P QL + K +KSLP ++G+++I+ G
Sbjct: 85 LLECPYHGWAFTGNGTCDRIPQ-QLPDAKAETSRRACVKSLPTAVEQGLLFIYAGTPARA 143
Query: 315 DEPPTATIPCLL----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 370
++ P IP + P G+ + +LP + LL+N+LD +H P+TH + K
Sbjct: 144 EQTPIPLIPVPMVDGKPTDGWLV-LNTFRDLPYDALTLLENVLDPSHLPYTHHGSVGKR- 201
Query: 371 SVPSLVKFLTPAS---GLQGYWDPYP-------IDMEFRPPCMVLSTIGISKPGKLEGQN 420
S S V+ +S G G W P + F PC++ +
Sbjct: 202 SNASPVELEVTSSDKLGFTGTWADGPRKGTLGRQNTTFIAPCLMWHEL-----------T 250
Query: 421 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFAEQVLNED 477
++Q + ++ P + + R+ R FAS + F++ + H + ED
Sbjct: 251 SKQFGETITVVYAT-PKRKGECRIFARFPFKFASKVPEF-FIKATPEWYSHINNNAILED 308
Query: 478 LRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
++ L QER N + + LP D YR W
Sbjct: 309 DQIFLHHQERYLEQSGGSTNFSQSFYLPTKADAFVFEYRQW 349
>gi|166365800|ref|YP_001658073.1| pheophorbide a oxygenase [Microcystis aeruginosa NIES-843]
gi|166088173|dbj|BAG02881.1| pheophorbide a oxygenase [Microcystis aeruginosa NIES-843]
Length = 460
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 129/339 (38%), Gaps = 57/339 (16%)
Query: 215 KNFWFPVAFSTDLK------------------DDTMEPWVIFRGKDGIPGCVQNTCAHRA 256
+ W+P+ + DL D + W +F K C HR
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDK----------CPHRL 70
Query: 257 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGM 308
PL G +NE G ++CPYHGW +S G CE +P + R ++S P ++G+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 309 IWIWPGD--EPPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 363
++++ G+ P IP + P + I + +LP L++N++D +H P+TH
Sbjct: 131 LFVYAGNPENAPLTAIPIIEPMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHH 190
Query: 364 STFA-KGWSVPSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
T + + P ++ + + G +G W P R + PG + T
Sbjct: 191 LTIGNRANAAPMELEIIESNRQGFKGIWPEGP-----RKGKLGQQYSNFIAPGFIYHDLT 245
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLR 479
+ P + + RL R F S L + + H + + ED +
Sbjct: 246 SEKFGRTLTAVYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQ 305
Query: 480 LVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
+ L QER N + LP D YR W
Sbjct: 306 IFLYYQERYLQAQGDSRNFSQACYLPTKADLFVFEYRNW 344
>gi|37519596|ref|NP_922973.1| hypothetical protein gll0027 [Gloeobacter violaceus PCC 7421]
gi|35210587|dbj|BAC87968.1| gll0027 [Gloeobacter violaceus PCC 7421]
Length = 360
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L NFW+ +A S + + P V++R G +++ CAHR L G V
Sbjct: 23 LNNFWYGLAHSPAITSIPRQVVVMGRPLVLYRTVGGRVVALEDRCAHRDTALSGGWVEGN 82
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGD-----EP 317
++CPYHGW Y+ DG C ++P+ Q R K+++ P E+ G++W++ G+ P
Sbjct: 83 CLRCPYHGWRYAPDGGCTEIPANQPGVAISRLAKVETFPVQERHGLVWVFLGELPEAQRP 142
Query: 318 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
++P P + E + ++ N +D++HAPF H + F +
Sbjct: 143 ELPSLPEYAAPGWRAVRGEFTWSG--HYTRVIANTVDMSHAPFVHAAAFGR 191
>gi|407713704|ref|YP_006834269.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407235888|gb|AFT86087.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 347
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 114/274 (41%), Gaps = 49/274 (17%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ + DL D + E +++R ++G+ + N C HR PL G
Sbjct: 4 LRNTWYCAGWGADLGQDDLIDRTILKESVLLYRKQNGLAVAIGNRCPHRFAPLSSGCKKG 63
Query: 267 GRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT-- 321
+ CPYHG + G+C P T + ++ P E+ +WIW GD P A
Sbjct: 64 DNVACPYHGLTFGPSGECVLNPHGDGTTPKAARVTRYPLVERYDALWIWMGD-PELADAD 122
Query: 322 -IPCLLPPSGFE--IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--------- 369
IP S E H +E+P+ + LL DNLLDL+H P+ H A+G
Sbjct: 123 EIPDFSESSLREGWGHIRGHLEVPVHYELLTDNLLDLSHVPYLHPFLSAQGPQPDGFREE 182
Query: 370 ----------WSVP-SLVKFLTPASGLQGYWDPYP------IDMEFRPPCMVLSTIGISK 412
WS+ +L TP L W+ P DM + P +L GIS
Sbjct: 183 RELKQDGNTVWSMHRNLNTVTTPLFRL--LWEDAPEVIEGYFDMRWTAPSNLLLRAGIS- 239
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 446
++G+ R+ + H+ P++ T +
Sbjct: 240 --AMDGR--REDGARIPMAHLLTPATETHTHYFW 269
>gi|407941245|ref|YP_006856886.1| Rieske (2Fe-2S) domain-containing protein [Acidovorax sp. KKS102]
gi|407899039|gb|AFU48248.1| Rieske (2Fe-2S) domain-containing protein [Acidovorax sp. KKS102]
Length = 351
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 131/339 (38%), Gaps = 44/339 (12%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +R + + C HR PL LG+V EG
Sbjct: 4 KNAWYVACTPDEIADKPLGRTICGEKIVFYRPAPDQVAALDDFCPHRGAPLSLGTVCEGH 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPG--DEPPTATIPCL 325
+QC YHG GK MP +++ K +S P E+ G IW+WPG D+ ATI L
Sbjct: 64 LQCGYHGLRVECTGKSVSMPGQRVQGFPKARSFPVVERYGFIWVWPGDADKADPATIHHL 123
Query: 326 LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH---------------------- 362
+ E + + + ++ L++DNL+DL H + H
Sbjct: 124 PWANNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHSTSIGQKEIDEVPCKTRVEGDE 183
Query: 363 --TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKL 416
TS F +G P K +GL D +D F PP VL +G++ G
Sbjct: 184 VITSRFMEGIEAPPFWKMALRMNGLP---DDQLVDRWQICHFTPPSHVLIEVGVALAGHG 240
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 476
+ P + + M+ +F P + R ++ E
Sbjct: 241 GYNAPADKKASSIVVDFITPETETSIHYFWGMARNFKP---QDPSLTTQIRDGQGKIFAE 297
Query: 477 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 515
D +++ QQE + + L + D GV+ R D L
Sbjct: 298 DQQMLELQQENLLRYPDRKLLMLNIDAGGVQSRKILDRL 336
>gi|427731793|ref|YP_007078030.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427367712|gb|AFY50433.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 340
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 213 RLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
+ +FW+ V S LK +T+ E IFRG+DG P +++ C HR+ L G+V
Sbjct: 2 QFADFWYIVTLSEQLKSNTVLARSLLGEWLAIFRGEDGQPVALRDRCLHRSSRLSAGNVC 61
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTA 320
+G +QCPYHGW Y +GK +P+ + + + K+ EQ+G +++ + P
Sbjct: 62 QGALQCPYHGWVYDRNGKVIAVPAEGVDFQPSQQRQAKAYATKEQDGYVYVRLAENPSVD 121
Query: 321 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
P +P +G+E ++ +N +D+ H F H F
Sbjct: 122 FAPFSMPHYGEAGWET-VRVINRFANNVTNCAENFIDIPHTAFVHPGVF 169
>gi|418532825|ref|ZP_13098722.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
gi|371450151|gb|EHN63206.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
Length = 359
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTC 252
++++ + P P + W+ F+ +LKD + +P V+FR DG +++ C
Sbjct: 6 QTMSATAPAFPLDQ-----WYVAGFAWELKDQPVARTLLGQPVVLFRTADGRVAALEDRC 60
Query: 253 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIW 310
HR PL G+V ++C YHG +S +G+C ++P + K +KS E++ ++W
Sbjct: 61 CHRELPLSCGTVEAAGLRCGYHGLLFSHEGQCLEIPGQERIPAKACVKSFELRERDQILW 120
Query: 311 IWPGDEPPTATIPCLLPPSGFEIHAEI-------VMELPIEHGLLLDNLLDLAHAPFTHT 363
IW G P ++P PP+ + +H++ V + L+ DNLLDL+H + H
Sbjct: 121 IWMGATPD--SVPDTEPPA-YAVHSDPQYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHL 177
Query: 364 STFA 367
T
Sbjct: 178 KTIG 181
>gi|417544904|ref|ZP_12195990.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC032]
gi|421667444|ref|ZP_16107514.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC087]
gi|421669624|ref|ZP_16109643.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC099]
gi|400382792|gb|EJP41470.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC032]
gi|410384719|gb|EKP37225.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC087]
gi|410388009|gb|EKP40449.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC099]
Length = 358
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRINGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|332855082|ref|ZP_08435687.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332870056|ref|ZP_08439017.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
gi|332727662|gb|EGJ59079.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332732472|gb|EGJ63724.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
Length = 391
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 36 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 95
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ L
Sbjct: 96 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 153
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 154 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 200
>gi|213966890|ref|ZP_03395040.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato T1]
gi|301381572|ref|ZP_07229990.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato Max13]
gi|302061672|ref|ZP_07253213.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato K40]
gi|302134357|ref|ZP_07260347.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato NCPPB 1108]
gi|213928212|gb|EEB61757.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato T1]
Length = 354
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 132/337 (39%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPG+ P L+
Sbjct: 64 LVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAIERYGFIWVWPGEREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVITARHMENIMPPPFWKMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK + + P + + M+ +F + + R +
Sbjct: 237 AGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFKPADEQ---LTATIREGQHK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ +EDL ++ QQ + + L + D GV+ R
Sbjct: 294 IFSEDLEMLERQQLNLLQHPHRNLLKLNIDAGGVQSR 330
>gi|254489200|ref|ZP_05102404.1| vanillate O-demethylase oxygenase subunit [Roseobacter sp. GAI101]
gi|214042208|gb|EEB82847.1| vanillate O-demethylase oxygenase subunit [Roseobacter sp. GAI101]
Length = 355
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 14/178 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ +STD DD + + V+FR DG +++ C HR PL G
Sbjct: 4 VRNAWYVAGWSTDFGDDLVPLTLLAQNIVVFRCSDGQLAALEDRCPHRLLPLSKGKRIGD 63
Query: 268 RIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
IQC YHG + G+C ++P S + + S P E+ G+++IW GD T
Sbjct: 64 TIQCGYHGMTFDAGGQCVRVPGQSNLPTSAYVDSFPVLERHGIVFIWMGDAEKADTALAF 123
Query: 326 ----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK 377
L G+ +H + + + + +NL+D AH F H +T S VP VK
Sbjct: 124 DMPELSEDGWHLHHGDKLHIKANYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVK 181
>gi|193076823|gb|ABO11546.2| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
ATCC 17978]
Length = 391
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 36 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 95
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ L
Sbjct: 96 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 153
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 154 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 200
>gi|67921279|ref|ZP_00514798.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
gi|67857396|gb|EAM52636.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
Length = 349
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 145/346 (41%), Gaps = 35/346 (10%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
T L+N W+ DLK M EP +I R KDG +++ C HR PL G
Sbjct: 2 TTLLRNCWYVALPGKDLKPGKMVHRKMLGEPVLIGRRKDGQVFAMRDICPHRGIPLRYGW 61
Query: 264 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW---- 312
+ + C YHGW ++T DG C ++PS + +KI + C E +G IW++
Sbjct: 62 MEGEDVCCCYHGWRFNTEDGGCREIPSLTEHDNLDISRIKIPTYACREVQGHIWVYFAED 121
Query: 313 ------PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
P D PP TIP G + I I+H ++ L+D AH P+ H+S +
Sbjct: 122 SKKEVDPADIPPVPTIP-DFGKIGPGVSETIHFACHIDHAII--GLMDPAHGPYVHSSWW 178
Query: 367 AKGWSVPSLVKFLTPASGLQGY-WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCA 425
+ VK QG+ PY + + RP ++ + I E + R
Sbjct: 179 WRSGPRKFRVKEKQYEPVSQGFRLVPYDMPVSARPYKILGDNVSIEI--VFELPSVRTEI 236
Query: 426 THLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM---QYLWRHFAEQVLNEDLRLVL 482
+ CL ++ T + + F S+ +P+M + L + L +D +V+
Sbjct: 237 LRGDRYSACLLTT--ITPIDETQCIAFQSIYWTIPWMGVFKPLLSLLTRKFLAQDRDVVI 294
Query: 483 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
QQE + ++ + + +R+ + + A+ PF P+
Sbjct: 295 QQQEGLAYNPSLMLIDDADTQAKWYFRIKYEYQKAIAENRPFKNPI 340
>gi|420241041|ref|ZP_14745210.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
sp. CF080]
gi|398073019|gb|EJL64206.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
sp. CF080]
Length = 427
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQNTCAH 254
+GP P + +W P +T+L +P + F+ DG G + CAH
Sbjct: 13 TGPGTPMGNLFRRYWLPALMATELPGPDCDPVRVSLLSERLIAFKDSDGKIGMMDEFCAH 72
Query: 255 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMI 309
R L G EG ++CPYHGW+Y T G+C ++PS + +K+KS PC E G+I
Sbjct: 73 RGVSLWFGRNEEGGLRCPYHGWKYDTTGQCVEVPSEPASSGFCQKIKLKSYPCVELGGVI 132
Query: 310 WIWPGDEPPTATIPCL 325
W + G +P
Sbjct: 133 WTYMGPPEEQPEVPAF 148
>gi|421652401|ref|ZP_16092760.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC0162]
gi|425747423|ref|ZP_18865431.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-348]
gi|445457815|ref|ZP_21446730.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC047]
gi|408505527|gb|EKK07248.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC0162]
gi|425493997|gb|EKU60219.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-348]
gi|444775995|gb|ELX00047.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC047]
Length = 358
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIPC 324
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLPT 122
Query: 325 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 123 LEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|424060551|ref|ZP_17798042.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Ab33333]
gi|404668503|gb|EKB36412.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Ab33333]
Length = 358
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|384247255|gb|EIE20742.1| hypothetical protein COCSUDRAFT_67210 [Coccomyxa subellipsoidea
C-169]
Length = 555
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 218 WFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+PVA D+ P V+++G DG CV + CAHR PL G V +G IQ
Sbjct: 88 WYPVAILADVDGSKPIPVTLLGKKLVLWQGSDGEWNCVVDRCAHRYAPLSEGRVKDGDIQ 147
Query: 271 CPYHGWEYSTDGKCEKMPSTQ------LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
C YHGW+Y+ G+C ++P + + +++ P + G +W+WP P A
Sbjct: 148 CAYHGWQYNGQGQCTRIPQAEDASACCSSSACVEAFPVQLRAGAVWVWPDSSPSAARDSS 207
Query: 325 LLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 361
L+ PS E + + + L++ LLD + FT
Sbjct: 208 LVLPSVDTVLEESLEYVDWYIRDFYYGYAGLMEMLLDPSACSFT 251
>gi|215484103|ref|YP_002326328.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB307-0294]
gi|421622339|ref|ZP_16063242.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC074]
gi|421795000|ref|ZP_16231088.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-21]
gi|213987796|gb|ACJ58095.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB307-0294]
gi|408695955|gb|EKL41509.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC074]
gi|410402452|gb|EKP54569.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-21]
Length = 358
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|169796641|ref|YP_001714434.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
baumannii AYE]
gi|213156161|ref|YP_002318581.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB0057]
gi|301347277|ref|ZP_07228018.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB056]
gi|301510924|ref|ZP_07236161.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB058]
gi|301595598|ref|ZP_07240606.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB059]
gi|417573227|ref|ZP_12224081.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC-5]
gi|421644603|ref|ZP_16085081.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-235]
gi|421646206|ref|ZP_16086658.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-251]
gi|421657203|ref|ZP_16097476.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-83]
gi|421700370|ref|ZP_16139887.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-58]
gi|421800681|ref|ZP_16236650.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC1]
gi|169149568|emb|CAM87457.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
baumannii AYE]
gi|213055321|gb|ACJ40223.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB0057]
gi|400208795|gb|EJO39765.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC-5]
gi|404570752|gb|EKA75825.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-58]
gi|408504744|gb|EKK06479.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-235]
gi|408517593|gb|EKK19131.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-251]
gi|408713779|gb|EKL58935.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-83]
gi|410406552|gb|EKP58555.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC1]
Length = 358
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|421806406|ref|ZP_16242270.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC035]
gi|410417750|gb|EKP69518.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC035]
Length = 358
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIPC 324
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLPT 122
Query: 325 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 123 LEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|421787610|ref|ZP_16223955.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-82]
gi|410406503|gb|EKP58507.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-82]
Length = 358
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVIEKFGFIWVWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|70730833|ref|YP_260574.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas protegens
Pf-5]
gi|68345132|gb|AAY92738.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas protegens
Pf-5]
Length = 352
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 129/337 (38%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L+ + E V +R +G V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDELQGKPLGRQICGEHMVFYRAHEGRVTAVEDFCPHRGAPLSLGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL- 326
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 64 LVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--ALADPALIH 121
Query: 327 ----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWADNDQWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPQ 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ + G +W D P+D F PP VL +G++
Sbjct: 177 TTVDGDQVVTARHMHNVMPPPFWRMALRGNQLADDVPVDRWQICRFSPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
G Q + P S + M+ +F P + R +
Sbjct: 237 AGHGGYDAPAQYKASSIVVDFITPESDTSIWYFWGMARNFNP---QDPALTESIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 294 IFSEDLEMLERQQQNLLAQPQRNLLKLNIDAGGVQSR 330
>gi|425453334|ref|ZP_18833092.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9807]
gi|389799951|emb|CCI20569.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9807]
Length = 349
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 152/356 (42%), Gaps = 61/356 (17%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L++FW+ + LK + EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 267 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPT 319
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ +
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFISADSKR 124
Query: 320 ATIPCLLPP----SGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 370
LPP S F +I I + I+H ++ L+D AH P+ HTS + +
Sbjct: 125 EINQENLPPVPTISDFGKLTPKIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWWRSG 182
Query: 371 SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 430
VK + ++P P+ P M +S +KP K+ G +
Sbjct: 183 PRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI------E 224
Query: 431 LHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHFAEQ 472
+ LPS R + R ++ F ++ + + F+ L R+ Q
Sbjct: 225 IVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYLTLQ 284
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P+
Sbjct: 285 FLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPI 340
>gi|318040272|ref|ZP_07972228.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
CB0101]
Length = 437
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 48/309 (15%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMEPWVI--------FRGKDGIPGCVQNTCAHRACPLHLGS 263
T + W+ VAF DL P+ + F G + + C HR PL G
Sbjct: 9 TSWTHAWYAVAFLRDLDPKRPTPFTLMGEDLVLWFERSSGQWRALADVCPHRLVPLSDGR 68
Query: 264 VNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-----KIKSLPCFEQEGMIWIWPGDEP 317
+NE G ++CPYHGW ++ +G+C +P Q + + +G+++++ GD
Sbjct: 69 LNEAGELECPYHGWTFNGEGRCTAIPQAQEGSTISPRSHCRGYATATGQGLLFVFSGDIA 128
Query: 318 PTATIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 373
A P L P G+ + + +LP++ LL+N+LD++H PFTH +T + +
Sbjct: 129 EAADHPLPLVPEIDQPGWLVQ-DTFRDLPMDALTLLENVLDVSHVPFTHHATVGRRENAG 187
Query: 374 SLVKFLTP--ASGLQGYWDPYP----IDMEFR---PPCMVLSTIGISKPGKLEGQNTRQC 424
+ L G G W P + EF PC++ + T +
Sbjct: 188 PVELELNSFGPEGFTGVWQEGPRRGKLGSEFTTYAAPCLMWHEL------------TAKG 235
Query: 425 ATHLHQLHVCLPSSRKKTRLLYRMSLDF-----ASVLKHVPFMQYLWRHFAEQVLNEDLR 479
+ + P R + RL+ R F A +L+ P ++L +H V+ ED +
Sbjct: 236 FARIFTVVYATPIRRGECRLITRFPFKFNSPWPARLLRLRP--EWL-QHLGNHVVLEDDQ 292
Query: 480 LVLGQQERM 488
L L QER+
Sbjct: 293 LFLHWQERV 301
>gi|126641164|ref|YP_001084148.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
ATCC 17978]
Length = 358
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|186686519|ref|YP_001869715.1| pheophorbide a oxygenase [Nostoc punctiforme PCC 73102]
gi|186468971|gb|ACC84772.1| Pheophorbide a oxygenase [Nostoc punctiforme PCC 73102]
Length = 482
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 140/343 (40%), Gaps = 43/343 (12%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVIFR--------GKDGIPGCVQNTCAHR 255
+G + P + + W+PV + DL P+ + + + C HR
Sbjct: 27 AGGLDPDSFDCQEVWYPVCYIEDLNKSQPTPFTLLEQNIVLWWDKNEQTWRAFIDQCPHR 86
Query: 256 ACPLHLGSVN-EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--------IKSLPCFEQE 306
PL G +N EG ++CPYHGW +S GKCE +P Q++ K + +L +
Sbjct: 87 LAPLSEGRINHEGWLECPYHGWAFSGTGKCEFIPQ-QIQRTKAEVSQRACVATLATAVYQ 145
Query: 307 GMIWIWPG--DEPPTATIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPF 360
GM++++PG + +P + P P G+ I ++P + L++N+LD +H P+
Sbjct: 146 GMLFVYPGRAENAAKTKVPIVEPLEQDPDGW-ICLNTFRDVPYDALTLMENVLDTSHIPY 204
Query: 361 THTSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 418
TH T +V P ++ + G +G W P R + PG +
Sbjct: 205 THHRTVGNRANVSPIDLEIIESGKWGFKGTWAEGP-----RKGTLGRQDTTFIAPGLMWH 259
Query: 419 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFAEQVLN 475
T + + P + + RL R F+S L + F++ + H + +
Sbjct: 260 DLTSKQYGRTLTVVYATPIRKGECRLFARFPFKFSSNLPGL-FLKLTPRWYSHIGQNRVL 318
Query: 476 EDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
ED ++ L QER N + LP D + R W
Sbjct: 319 EDDQIFLHYQERYLEKLGGSANFTKAFYLPTKADLFVFQLRSW 361
>gi|410090976|ref|ZP_11287555.1| Rieske (2Fe-2S) protein [Pseudomonas viridiflava UASWS0038]
gi|409761697|gb|EKN46751.1| Rieske (2Fe-2S) protein [Pseudomonas viridiflava UASWS0038]
Length = 354
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 131/335 (39%), Gaps = 48/335 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R +D +++ C HR PL LG V G+
Sbjct: 4 KNTWYVACAADEVTDKPLGRQICNEKMVFYRDQDQQIVALEDFCPHRGAPLSLGFVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPG--DEPPTATIPCL 325
+ C YHG DG+ MP ++R K+ E+ G IW+WPG D A IP L
Sbjct: 64 LVCGYHGLVMGGDGQTVAMPGQRVRGFPCNKTFAAIERYGFIWVWPGERDRADAALIPHL 123
Query: 326 -LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 384
S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 124 EWAVSDQWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPVTT 178
Query: 385 LQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISKPG 414
++G +W D P+D F PP V +G++ G
Sbjct: 179 VEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVHIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
K R+ + P + + M+ +F + R ++
Sbjct: 239 KGGYNAPREFKASSIVVDFITPETDTSIWYFWGMARNFNP---QDEALTASIREGQGKIF 295
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
EDL ++ QQ+ + + L + D GV+ R
Sbjct: 296 TEDLEMLERQQQNLLQHPHRKLLKLNIDAGGVQSR 330
>gi|424741369|ref|ZP_18169728.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-141]
gi|422944994|gb|EKU39967.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-141]
Length = 358
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IWIWPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWIWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIHCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|427729894|ref|YP_007076131.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427365813|gb|AFY48534.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 469
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 140/343 (40%), Gaps = 41/343 (11%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVIFRGKDGIPGCVQN---------TCAH 254
+G + P + W+PV + DL D + +D + +N C H
Sbjct: 19 AGGLDPERFDWQEVWYPVHYVEDL-DKSQPTRFTLLERDIVLWWDKNEQTWRAFADQCPH 77
Query: 255 RACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP--------STQLRNVKIKSLPCFEQ 305
R PL G +NE G ++CPYHGW +S GKCE++P T LR + SLP +
Sbjct: 78 RLAPLSEGRINEDGWLECPYHGWAFSGTGKCERIPQQAAGDKAETSLRAC-VNSLPTTVR 136
Query: 306 EGMIWIWPG--DEPPTATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPF 360
+G+++++PG + T+P L + + ++P + L++N+LD +H P+
Sbjct: 137 QGLLFVYPGRAENAAQTTVPIVDALEEDADGWVCLNTFRDIPYDALTLMENVLDSSHIPY 196
Query: 361 THTSTFAKGWSVP--SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 418
TH T +V +L + G +G W+ P R + PG +
Sbjct: 197 THHRTVGNRANVSPVNLEVVESGKWGFKGIWEEGP-----RKGTLGKQDTTFIAPGLMWH 251
Query: 419 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNE 476
T + + P + + RL R F+S + + + H + + E
Sbjct: 252 DLTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSKIPGLFIKLTPRWYSHIGQNGVLE 311
Query: 477 DLRLVLGQQERM----NNGANV---WNLPVGYDKLGVRYRLWR 512
D ++ L QER AN+ + LP D + WR
Sbjct: 312 DDQIFLHYQERYLEQRGGSANLNKAFYLPTKADAFVAQLHSWR 354
>gi|403673643|ref|ZP_10935934.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp. NCTC
10304]
Length = 358
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|407697722|ref|YP_006822510.1| phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein
[Alcanivorax dieselolei B5]
gi|407255060|gb|AFT72167.1| Phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein
[Alcanivorax dieselolei B5]
Length = 330
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+ FW+PV ++LK + +F DG+P +++ C HR L LG V +
Sbjct: 9 FRRFWYPVMPMSELKQRPQRFELLGQALALFLDDDGVPAALEDRCCHRTARLSLGEVCDN 68
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRN----VKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
I CPYHGW Y+ +G+C +P R+ ++K+ C E+ G W+ E P IP
Sbjct: 69 AIACPYHGWRYNREGQCVLVPQMPDRDPGPKRRVKAFSCREKYGYAWV--ALEQPLFDIP 126
Query: 324 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
F + E E + +++N LD+AH + H TF
Sbjct: 127 DFPEAADDSFVLIHEFYEEWRVSGLRVMENELDMAHPSYVHLGTFG 172
>gi|110679615|ref|YP_682622.1| vanillate O-demethylase oxygenase [Roseobacter denitrificans OCh
114]
gi|109455731|gb|ABG31936.1| vanillate O-demethylase oxygenase, putative [Roseobacter
denitrificans OCh 114]
Length = 356
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 107/266 (40%), Gaps = 38/266 (14%)
Query: 212 TRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
T ++N W+ A+S+++ D +P ++FR DG +++ C HR PL +G
Sbjct: 3 TLVRNAWYVAAWSSEIDDALRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGKRI 62
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
+QC YHG + TDGKC ++P Q R + + + P E+ G++WIW G EP A
Sbjct: 63 GDTVQCGYHGLTFDTDGKCVRVPG-QDRIPPSACVDAYPTEERSGIVWIWMG-EPERANP 120
Query: 323 PCLLPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSL 375
+ F +H + + + + +NL+D AH F H +T S VP
Sbjct: 121 DDIFDLPQFHDDSWHMHHGGALHIKSNYLNVAENLVDPAHVSFVHETTLGNSASENVPVH 180
Query: 376 VK-------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 416
V F G D + R PC G + +
Sbjct: 181 VSTSGEEIIAWRWIRNSEPIGFFKAFGNFTGNVDRWHY-YHLRLPCTAYIDFGSADATRQ 239
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKT 442
++ R T + LH P + T
Sbjct: 240 IAEDDRDSGTRILALHFMTPVTETYT 265
>gi|417551548|ref|ZP_12202626.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-18]
gi|417552026|ref|ZP_12203096.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-81]
gi|417562953|ref|ZP_12213832.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC137]
gi|417564000|ref|ZP_12214874.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC143]
gi|421199265|ref|ZP_15656429.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC109]
gi|421454954|ref|ZP_15904301.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-123]
gi|421633387|ref|ZP_16074022.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-13]
gi|421654322|ref|ZP_16094652.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-72]
gi|421661633|ref|ZP_16101806.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC110]
gi|421804713|ref|ZP_16240616.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-A-694]
gi|445434199|ref|ZP_21439892.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC021]
gi|395525535|gb|EJG13624.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC137]
gi|395555756|gb|EJG21757.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC143]
gi|395565232|gb|EJG26880.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC109]
gi|400212744|gb|EJO43703.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-123]
gi|400386003|gb|EJP49078.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-18]
gi|400392285|gb|EJP59331.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-81]
gi|408511089|gb|EKK12743.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-72]
gi|408706618|gb|EKL51925.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-13]
gi|408715639|gb|EKL60764.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC110]
gi|410410730|gb|EKP62622.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-A-694]
gi|444756604|gb|ELW81144.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC021]
Length = 358
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|425457635|ref|ZP_18837336.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9807]
gi|389800952|emb|CCI19818.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9807]
Length = 460
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 131/339 (38%), Gaps = 57/339 (16%)
Query: 215 KNFWFPVAFSTDLK------------------DDTMEPWVIFRGKDGIPGCVQNTCAHRA 256
+ W+P+ + DL D + W +F K C HR
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDK----------CPHRL 70
Query: 257 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGM 308
PL G +NE G ++CPYHGW +S G CE +P + R ++S P ++G+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 309 IWIWPGD--EPPTATIPCL--LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 363
++++ G+ P IP + + G I + +LP L++N++D +H P+TH
Sbjct: 131 LFVYAGNPENAPLTAIPIIEAMEEDGDAWICLDTFRDLPYSAVTLMENIIDSSHIPYTHH 190
Query: 364 STFA-KGWSVPSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
T + + P ++ + + G +G W P R + PG + T
Sbjct: 191 LTIGNRANAAPMELEIIESNRQGFKGIWPEGP-----RKGQLGQQYSNFIAPGLIYHDLT 245
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLR 479
+ + P + + RL R F S L + + H + + ED +
Sbjct: 246 SEKFGRTLTVVYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQ 305
Query: 480 LVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
+ L QER N + LP D L YR W
Sbjct: 306 IFLYYQERYLQAQGGSQNFSQACYLPTKADLLVFEYRNW 344
>gi|375134014|ref|YP_004994664.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
calcoaceticus PHEA-2]
gi|325121459|gb|ADY80982.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
calcoaceticus PHEA-2]
Length = 358
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIPC 324
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALAEEAKLPT 122
Query: 325 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 123 LEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|226951632|ref|ZP_03822096.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
sp. ATCC 27244]
gi|226837613|gb|EEH69996.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
sp. ATCC 27244]
Length = 358
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ + K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRTHGFPCNKAYAVIEKYGFIWVWPGEK--ALADESKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWAEHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|148553989|ref|YP_001261571.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499179|gb|ABQ67433.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 359
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
Query: 237 IFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR--N 294
++RG G+ + + C HR PL LG+V I+C YHG E+ DG C ++P +
Sbjct: 33 VYRGASGVLVGLDDFCPHRLAPLSLGTVVGDGIRCAYHGAEFGADGICVRVPGQKAVPPR 92
Query: 295 VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE--------IVMELPIEHG 346
++++ P E+ G IWIW GD A + P GF + + + + ++
Sbjct: 93 ARVRTYPVVERHGYIWIWMGDPAGAADESSI--PEGFWVSGDPAWIGGYGHIESIRSDYR 150
Query: 347 LLLDNLLDLAHAPFTHTSTFA 367
L+ DNL D+ HA F H +F
Sbjct: 151 LINDNLFDITHAEFVHPESFG 171
>gi|410665771|ref|YP_006918142.1| Rieske (2Fe-2S) domain-containing protein [Simiduia agarivorans SA1
= DSM 21679]
gi|409028128|gb|AFV00413.1| Rieske (2Fe-2S) domain-containing protein [Simiduia agarivorans SA1
= DSM 21679]
Length = 341
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 218 WFPVAFSTDLKDD-------TMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+PVA + +L D P VIFR + P + + C HR PL G +G+IQ
Sbjct: 11 WWPVAVARELSADRPMRRQLNGLPLVIFRTNELKPAALVDACPHRMAPLSQGQCTQGQIQ 70
Query: 271 CPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
CPYHGW + G+C ++P Q R +++L C E G+IW+ A P
Sbjct: 71 CPYHGWTFDGQGRCVRIPGMQDAHALSRRPLVRALGCVESAGLIWV-----QTEAGAPLN 125
Query: 326 LPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 383
LP + + M+ ++ LL +N L+ H F H + + L P
Sbjct: 126 LPDESNGVD-QFFMQSTVDATLLDIAENFLEAFHTHFVHRGLVRRDTQRQQVDALLRPID 184
Query: 384 G 384
G
Sbjct: 185 G 185
>gi|163795088|ref|ZP_02189056.1| oxidase-related protein [alpha proteobacterium BAL199]
gi|159179486|gb|EDP64015.1| oxidase-related protein [alpha proteobacterium BAL199]
Length = 357
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 22/174 (12%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
++ L++ W+ S +L + EP + R G +++ C HR PL G
Sbjct: 14 DSFLRDIWYFALPSAELGRGALRPKTLLGEPVLFGRDDSGAVFAMRDICPHRGIPLSDGR 73
Query: 264 VNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEP 317
++G ++C YHGW ++TDG+C +PS + +++++ P ++ G IW++ +P
Sbjct: 74 FDQGEVECCYHGWRFATDGRCTAIPSLTVDQTMDVDKIRVRTYPVVDRHGAIWVYMPADP 133
Query: 318 PTATIPCLLPPSGFEIHAE-----IVMELP--IEHGLLLDNLLDLAHAPFTHTS 364
+ P + PP E+ M P I+H ++ L+D AH PF HTS
Sbjct: 134 RSTAEPAVSPPVLPEVTNRGPGMVQRMSFPCHIDHAVI--GLMDPAHGPFVHTS 185
>gi|428312063|ref|YP_007123040.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428253675|gb|AFZ19634.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 353
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ VA ST+++ + +P V++R G +++ C HR L G V R+
Sbjct: 21 NHWYVVARSTEVQTQPLGVTLWHQPIVLYRDNSGGVHALEDRCPHRQVKLSHGCVIGDRL 80
Query: 270 QCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPP--TATIP 323
+C YHGW++ + G+C +P + +L N KI++ P EQ+G IW++PGD +A I
Sbjct: 81 ECHYHGWQFQSSGECAAVPYLAANQKLPNCKIRTYPVHEQDGFIWLFPGDVETLHSAQIQ 140
Query: 324 CLLPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHA 358
+ P I V+E + L++NL+D+ H
Sbjct: 141 PMGVPEWEHLNYIATVSVIECKAHYSYLIENLMDMYHG 178
>gi|421696591|ref|ZP_16136173.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-692]
gi|404561352|gb|EKA66587.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-692]
Length = 358
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|405377776|ref|ZP_11031712.1| Rieske (2Fe-2S) domain-containing protein [Rhizobium sp. CF142]
gi|397325682|gb|EJJ30011.1| Rieske (2Fe-2S) domain-containing protein [Rhizobium sp. CF142]
Length = 427
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQNT 251
L+ +GP P + +W P +++L +P + F+ +G G +
Sbjct: 10 LSRTGPGTPMGDLFRRYWIPALMASELPGPDCDPVRVSLLSERLIAFKDTNGKIGLMDEF 69
Query: 252 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQE 306
CAHR L G EG ++CPYHGW+Y T G+C ++PS + + +K+KS PC E
Sbjct: 70 CAHRGVSLWFGRNEEGGLRCPYHGWKYDTTGQCVEVPSEPVSSGFCQKIKLKSYPCVEFG 129
Query: 307 GMIWIWPGDEPPTATIPCL 325
G+IW + G E +P
Sbjct: 130 GVIWTYMGPEEHQPELPVF 148
>gi|422298704|ref|ZP_16386294.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas avellanae
BPIC 631]
gi|407989564|gb|EKG31854.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas avellanae
BPIC 631]
Length = 354
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 49/243 (20%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQNQQIVAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVITARHMENIMPPPFWKMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGK 415
GK
Sbjct: 237 AGK 239
>gi|302543069|ref|ZP_07295411.1| oxidoreductase alpha subunit [Streptomyces hygroscopicus ATCC
53653]
gi|302460687|gb|EFL23780.1| oxidoreductase alpha subunit [Streptomyces himastatinicus ATCC
53653]
Length = 367
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 46/282 (16%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGK------DGIPGCVQNTCAHRACPLHLG 262
+N W+ A+ ++ + + EP +R + G + + C HR PL
Sbjct: 6 RNQWYVAAYGREVGRELLARTILNEPIAFYRTEPNSDEPTGTVVALADRCVHRRYPLSAS 65
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTA 320
++ + C YHG+ Y T G C +P + R ++ S P EQ+ ++W+W GD P
Sbjct: 66 RLDGDNVVCGYHGFTYDTSGTCVFVPGQKRVPRTARVASYPVVEQDSLVWVWIGD--PAL 123
Query: 321 TIPCLLPPSGFEIH---AEIVMELPIE--HGLLLDNLLDLAHAPFTH------------- 362
P +P + + + PI+ +GLL+DNL+DL+H + H
Sbjct: 124 ADPAAIPRAPWLADPGWTTVGGMEPIDAGYGLLVDNLMDLSHETYLHGGYIGTPEVAETP 183
Query: 363 -TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
T+ +G + + + F ++G++G + D+E+ PC+ L I+
Sbjct: 184 ITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSRIAP 242
Query: 413 PGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
G L E + A H+ + PS+ + + +S DFA
Sbjct: 243 AGVLPEADGSDPNAFHVEITYAITPSTDQTVYDFWAVSRDFA 284
>gi|402822359|ref|ZP_10871849.1| vanillate O-demethylase oxygenase subunit [Sphingomonas sp. LH128]
gi|402264108|gb|EJU13981.1| vanillate O-demethylase oxygenase subunit [Sphingomonas sp. LH128]
Length = 353
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 127/303 (41%), Gaps = 48/303 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L W+PVA + ++ + + +P VI++ D + N C HR PL LG+
Sbjct: 28 LARHWYPVALAREVGEKPVGTRLLDQPLVIYKSGDEV-VVATNVCPHRGVPLSLGTQQGD 86
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIW---PGDEPPTA 320
+ CPYHG + GKC +P+ R++ +++ P FE+ G+IW GD P
Sbjct: 87 SVVCPYHGLRFGGGGKCVHVPAHPARDIPERLHLRTFPSFERYGLIWTCLDAEGDAPAAG 146
Query: 321 TIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 376
IP + S F+ +++ G L+ LD+AH F HT TFA VP+
Sbjct: 147 DIPDMPHWDESEFQQITCPWIDINGFAGRQLEGFLDVAHFAFVHTETFADPDNAEVPAYA 206
Query: 377 KFLTPASGLQGYWDP---YPIDM------------EFRPPCMVLSTIGISKPGKLEGQNT 421
T YW YPI + FR +T+ I PG
Sbjct: 207 PKRTEYGFEAEYWSSVGNYPIGVSQRGVPGFNWLRHFRCHLPFTATLEIHFPG------- 259
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
L ++ P S + TRL ++ +F + L +Q ++ F +++ ED +V
Sbjct: 260 ---TDRLVIMNAASPVSARVTRLFAPIARNFDTDLP----VQDVY-DFNQRIFEEDKAIV 311
Query: 482 LGQ 484
Q
Sbjct: 312 EAQ 314
>gi|148240601|ref|YP_001225988.1| putative dioxygenase [Synechococcus sp. WH 7803]
gi|147849140|emb|CAK24691.1| Putative dioxygenase [Synechococcus sp. WH 7803]
Length = 349
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 20/152 (13%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
+ + I+R DG V + C H+ L G V E + CPYHGW + +DG C K+P+
Sbjct: 29 QAFAIWRALDGTLSVVSDRCPHKGASLSAGRVGEEGLACPYHGWCFQSDGHCAKIPAQDS 88
Query: 293 -----RNVKIKSLPCFEQEGMIWIW--------PGDEPPTATIPCLLPPSGFEIHAEIVM 339
R + SLPC E G IWIW D PP +P + P + +
Sbjct: 89 AQAIPRRAQAFSLPCRESVGFIWIWWDPSAESSAEDLPP---LPTVGPVPEDDDRGWRAL 145
Query: 340 ELPIE---HGL-LLDNLLDLAHAPFTHTSTFA 367
E +E H L +L+ +DL HAPF H+ +F
Sbjct: 146 EGSVEWNAHWLRVLEAFMDLTHAPFVHSGSFG 177
>gi|58038766|ref|YP_190730.1| ferredoxin subunit of ring-hydroxylating dioxygenase [Gluconobacter
oxydans 621H]
gi|58001180|gb|AAW60074.1| Putative ferredoxin subunit of ring-hydroxylating dioxygenases
[Gluconobacter oxydans 621H]
Length = 374
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+FW+P+A+S DLK P + R ++G +++ CAHR PL LG V+
Sbjct: 24 DFWYPLAWSKDLKRGKTIGRRFGRFPIALVRPEEGSVFALEDRCAHRQVPLSLGKVSGEA 83
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIP 323
+QC YHGW Y G+C +P R + +K+ PC E GMI+I+PGD ++P
Sbjct: 84 VQCCYHGWAYGRSGRCIDVPYLGKRKLPNGVKTYPCREAGGMIFIFPGDAEKAESVP 140
>gi|418516298|ref|ZP_13082473.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410707099|gb|EKQ65554.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 358
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLCGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|410647609|ref|ZP_11358032.1| vanillate monooxygenase [Glaciecola agarilytica NO2]
gi|410132827|dbj|GAC06431.1| vanillate monooxygenase [Glaciecola agarilytica NO2]
Length = 349
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 137/351 (39%), Gaps = 54/351 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + + + E V +RG +G V++ C HR PL LG V +G
Sbjct: 4 KNCWYVACTPDEFTNKPLGRQICGERIVFYRGTEGKVSAVEDFCPHRGAPLSLGYVEDGL 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG + DG +MP ++ I+S P E+ G +W+W G+ T P +P
Sbjct: 64 LVCGYHGLKMGCDGSTAEMPGQRVNGFPCIRSYPVVERHGFVWVWTGES--TLADPSKIP 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH-------------------- 362
+ + E + + ++ L++DNL+DL H + H
Sbjct: 122 ELEWANNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEVPVHTTSED 181
Query: 363 ----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
TS F + P + A+ L D P+D F PP V+ +G++ G
Sbjct: 182 DMVVTSRFMENVLAPPFWQAALRANHLA---DDVPVDRWQLCRFTPPSQVMIEVGVAHAG 238
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE--- 471
+ + + P + + M+ +F P + L E
Sbjct: 239 NGGYEADPKFKAGSIVVDFITPETETSIWYFWGMARNFR------PEDEALTDQIREGQG 292
Query: 472 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQL 522
Q+ +EDL ++ QQ + + L + D GV+ R D + K QL
Sbjct: 293 QIFSEDLEMLERQQRNLLAYPDRNLLKLNIDTGGVKSRRILDRIIKEECQL 343
>gi|421624090|ref|ZP_16064966.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC098]
gi|408702121|gb|EKL47535.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC098]
Length = 358
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|330466146|ref|YP_004403889.1| oxidoreductase subunit alpha [Verrucosispora maris AB-18-032]
gi|328809117|gb|AEB43289.1| oxidoreductase subunit alpha [Verrucosispora maris AB-18-032]
Length = 347
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 40/276 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++ W+ A+ +++ + + EP V++R G + + C HR PL ++
Sbjct: 5 RDQWYVAAYGSEVGRELLARTVLGEPLVLYRTGAGEAVALADRCVHRRYPLSESRLDGDT 64
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPT--ATIP- 323
I C YHG+ Y G C +P Q R ++ + P EQ+ +W++ GD ATIP
Sbjct: 65 IVCGYHGFTYDRTGSCVFVPGQQRIPRTARVAAYPVVEQDSFVWVFIGDRDRADPATIPR 124
Query: 324 --CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK---- 377
L P + + L +GLL+DNL+DL+H + H + +
Sbjct: 125 APWLTDPRYAVVRG--MAPLNARYGLLVDNLMDLSHETYLHGGYIGTPEVANTPITTEVD 182
Query: 378 -------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL-E 417
F ++G+QG + D+E+ PPC+ L I+ G
Sbjct: 183 DERGIVYVSRHMDDAECPPFYARSTGIQGRITRWQ-DIEYHPPCLYLLHSRIAPQGVYPP 241
Query: 418 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
Q A H ++ PS+ T + ++ DFA
Sbjct: 242 AQGEDNEAFHAEIVYAITPSTEHTTYDFWAVARDFA 277
>gi|146338927|ref|YP_001203975.1| vanillate O-demethylase oxygenase [Bradyrhizobium sp. ORS 278]
gi|146191733|emb|CAL75738.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 278]
Length = 347
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 129/328 (39%), Gaps = 42/328 (12%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++K + + V++R DG +++ C HR PL G + +
Sbjct: 8 NAWYAAAWDAEVKQALLPRTICGKHVVMYRKADGAIAALEDACWHRLVPLSKGRLEGDTV 67
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG ++S G+C MPS + N +++ P E+ IW+W GD P P +P
Sbjct: 68 VCGYHGLKFSPQGRCTYMPSQETINPSACVRAYPAVERHRFIWLWMGD--PALADPATIP 125
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------GW 370
+ +++ ++ L++DNL+DL H F H S+ G
Sbjct: 126 DMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHGE 185
Query: 371 SVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
++ + F G G D + I + F PC V +G++ G +
Sbjct: 186 RTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFESPCTVTIDVGVAPTGTGAPEGD 244
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
R + L+ P + K + + ++ L + R + ED ++
Sbjct: 245 RSQGVNGMVLNTITPETDKTCHYFWAFARNYK--LSEQRLTTEI-REGVSGIFREDEFIL 301
Query: 482 LGQQERM--NNGANVWNLPVGYDKLGVR 507
QQ M N G +NL + + R
Sbjct: 302 EAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|365887865|ref|ZP_09426679.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3809]
gi|365336509|emb|CCD99210.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3809]
Length = 347
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 129/328 (39%), Gaps = 42/328 (12%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++K + + V++R DG +++ C HR PL G + +
Sbjct: 8 NAWYAAAWDAEIKQALLPRTICGKHVVMYRKSDGTIAALEDACWHRLVPLSKGRLEGDTV 67
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG ++S G+C MPS + N +++ P E+ +W+W GD P P +P
Sbjct: 68 VCGYHGLKFSPQGRCTYMPSQETINPSACVRAYPAVERHRFVWLWMGD--PALADPATIP 125
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------GW 370
+ +++ ++ L++DNL+DL H F H S+ G
Sbjct: 126 DMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHGE 185
Query: 371 SVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
++ + F G G D + I + F PC V +G++ G +
Sbjct: 186 RTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTVTIDVGVAPTGTGAPEGD 244
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
R + L+ P + K + + ++ L + R + ED ++
Sbjct: 245 RSQGVNGMVLNTITPETDKTCHYFWAFARNYQ--LSEQRLTTEI-REGVSGIFREDELIL 301
Query: 482 LGQQERM--NNGANVWNLPVGYDKLGVR 507
QQ M N G +NL + + R
Sbjct: 302 EAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|418520159|ref|ZP_13086209.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410704113|gb|EKQ62598.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 358
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLCGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|124266194|ref|YP_001020198.1| vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
gi|124258969|gb|ABM93963.1| putative vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
Length = 349
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 44/271 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L N W+ A ST++ + +I+R +DG + + C HR PLHLG
Sbjct: 8 LTNAWYVAALSTEVGAQALFHRKILDTSILIYRKQDGTAVALHDRCPHRFAPLHLGKRIG 67
Query: 267 GRIQCPYHGWEYSTDGKCEKMP--STQL-RNVKIKSLPCFEQEGMIWIWPG-DEPPTATI 322
+ C YH ++ G+C K P + Q+ + K++S P E+ G +WIW G D P A +
Sbjct: 68 DEVACLYHALQFDCTGQCTKNPHGNGQIPKAAKVRSFPLEERYGFLWIWMGEDAPDLARL 127
Query: 323 PCL-----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 377
P P +G A M + + L++DN++DL+H H + LV
Sbjct: 128 PDFGELDKGPDTGV---AFTYMHMKANYELIIDNVMDLSHIDHVHGEIITTRGQLSPLVP 184
Query: 378 FL---------------TPASGLQGYWDPYP-------IDMEFRPPCMVLSTIGISKPGK 415
+ TPA + + P P D+ + PP + ++G ++ G
Sbjct: 185 QMREGEQAISARWEWQQTPAMLIFANFLPEPAAGARHFFDITWTPPANIQLSVGATQDG- 243
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 446
G + LH C P + T +
Sbjct: 244 --GALDLAGCIGQYDLHTCTPETANTTHYWF 272
>gi|425444769|ref|ZP_18824812.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9443]
gi|389735432|emb|CCI01073.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9443]
Length = 460
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 131/339 (38%), Gaps = 57/339 (16%)
Query: 215 KNFWFPVAFSTDLK------------------DDTMEPWVIFRGKDGIPGCVQNTCAHRA 256
+ W+P+ + DL D + W +F K C HR
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDK----------CPHRL 70
Query: 257 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGM 308
PL G +NE G ++CPYHGW +S G CE +P + R ++S P ++G+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 309 IWIWPG--DEPPTATIPCL--LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 363
++++ G + P IP + + G I + +LP L++N++D +H P+TH
Sbjct: 131 LFVYAGNPENAPLTAIPIIEAMEEDGDAWICLDTFRDLPYSAVTLIENIIDSSHIPYTHH 190
Query: 364 STFA-KGWSVPSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
T + + P ++ + + G +G W P R + PG + T
Sbjct: 191 LTIGNRANAAPMELEIIESNRQGFKGIWPEGP-----RKGQLGQQYSNFIVPGLIYHDLT 245
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLR 479
+ + P + + RL R F S L + + H + + ED +
Sbjct: 246 SEKFGRTLTVVYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQ 305
Query: 480 LVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
+ L QER N + LP D L YR W
Sbjct: 306 IFLYYQERYLQAQGGSQNFSQACYLPTKADLLVFEYRNW 344
>gi|134099364|ref|YP_001105025.1| oxidoreductase subunit alpha [Saccharopolyspora erythraea NRRL
2338]
gi|291007249|ref|ZP_06565222.1| oxidoreductase alpha subunit [Saccharopolyspora erythraea NRRL
2338]
gi|133911987|emb|CAM02100.1| oxidoreductase alpha subunit [Saccharopolyspora erythraea NRRL
2338]
Length = 354
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 136/358 (37%), Gaps = 59/358 (16%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG--SVNE 266
+N W+ A+ T++ D EP + +R + G + C HR PL +
Sbjct: 6 RNQWYVAAYGTEIGRDLFARTICGEPILFWRTESGTVTANSDRCVHRRFPLSQAPSRLVG 65
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++ C YHG+ Y DGKC +P R ++ P EQ+ +W+W GD P P
Sbjct: 66 DQVVCGYHGFTYGPDGKCVAVPGQARVPRTARLTPYPVVEQDSFVWVWIGD--PALADPA 123
Query: 325 LLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK-- 377
+P + + A+ +E LL+DNLLDL+H + H + +
Sbjct: 124 RIPRAPYLDSADYTTVCGLEPLRARFSLLVDNLLDLSHETYLHGGYIGTPEVADTPISTE 183
Query: 378 ---------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 416
F ++GL G + D+E+ PPC+ I+ G +
Sbjct: 184 VDDDAGIVYVSRHMDDAECPPFYAKSTGLAGRISRWQ-DIEYTPPCLYKLHSRIAPVGSV 242
Query: 417 EGQN-TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
+ T A H+ ++ P + T + ++ DFA L H + L
Sbjct: 243 PNPDGTDPDAFHVEVVYAITPETEHSTHDFWAVARDFA-----------LDDHEVSEFLA 291
Query: 476 EDLRLVLGQQERMNNGAN--VWNLPVGYDKLGVRYRLW----RDALEKGAKQLPFMKP 527
E+ R V+ Q N V P GY +L + R L + A Q P P
Sbjct: 292 ENNRTVVLQDVEALNVLEQVVQTEPPGYQELSINIDTGGLAARRMLARMAGQTPRNAP 349
>gi|427704114|ref|YP_007047336.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427347282|gb|AFY29995.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 335
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 18/171 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+NFW+ V + L+D + +++FR G + + CAHR L G V
Sbjct: 5 LENFWYAVEHAHGLRDQPVSVTLLGRRYLLFRDTAGQAHALADYCAHRGASLARGWVEGS 64
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIWIWPGD-----EP 317
++CPYHGW Y DG C ++P+ ++ + P EQ G +WI+PG+ E
Sbjct: 65 CVRCPYHGWSYDVDGHCVRIPADPPGTAIPALARMATFPVREQSGFVWIFPGEAGRASEV 124
Query: 318 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P P L P + ++++ LD +HAPF H F
Sbjct: 125 PIPPFPELNQPGWRAVSGSYTWNAHFSR--VVESALDTSHAPFVHRPFFGN 173
>gi|154249242|ref|YP_001410067.1| Rieske (2Fe-2S) domain-containing protein [Fervidobacterium nodosum
Rt17-B1]
gi|154153178|gb|ABS60410.1| Rieske (2Fe-2S) domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 324
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 26/176 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 264
+KN W+ V S ++K + E ++R + G C+ + C HR + G +
Sbjct: 2 IKNQWYIVLSSKEVKKGELIGVTRFGEKLALWRDEAGKVHCISDVCCHRGASISHGKILS 61
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT 319
N R+ CP+HG+EY + G+ +P+ N K+K+ +E IWIW GD PT
Sbjct: 62 NGERVMCPFHGFEYDSTGRVCVIPANGRNTPVNENFKVKAYHTYELADFIWIWYGDGEPT 121
Query: 320 ATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
PP+ FE ++E + + ++N LD+ H PF H +T +G
Sbjct: 122 N------PPTYFEDITDDLSYSEFKEVWNVHYSRAIENQLDVVHVPFVHYNTIGRG 171
>gi|27377501|ref|NP_769030.1| vanillate O-demethylase oxygenase [Bradyrhizobium japonicum USDA
110]
gi|27350645|dbj|BAC47655.1| vanillate O-demethylase oxygenase subunit [Bradyrhizobium japonicum
USDA 110]
Length = 354
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 124/308 (40%), Gaps = 40/308 (12%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++K + + V++R DG +++ C HR PL G + +
Sbjct: 13 NAWYAAAWDAEVKPALLPRTICGKHVVMYRKADGAVAALEDACWHRLVPLSKGRLEGDTV 72
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG +Y+ G+C MPS + N +++ P E+ IW+W GD P P L+P
Sbjct: 73 VCGYHGLKYNAQGRCTFMPSQETINPSACVRAYPVVERHRYIWLWMGD--PALADPALVP 130
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFA--------------- 367
+ + + ++ L+LDNL+DL H F H S+
Sbjct: 131 DMHWNHDPAWAGDGKTIRVNCDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHGE 190
Query: 368 KGWSVPSLVKFLTPAS------GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
K +V ++ + P G G D + I + F PC + +G++ G +
Sbjct: 191 KTVTVTRWMRNIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTIAIDVGVAPTGTGAPEGD 249
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
R + L+ P + K + ++ + + R + +ED ++
Sbjct: 250 RSQGVNGFVLNTITPETEKTCHYFWAFVRNYQIGEQRITTEI---REGVSGIFHEDELIL 306
Query: 482 LGQQERMN 489
QQ M+
Sbjct: 307 EAQQRAMD 314
>gi|83944091|ref|ZP_00956547.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. EE-36]
gi|83844958|gb|EAP82839.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. EE-36]
Length = 355
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 107/266 (40%), Gaps = 42/266 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ +STD D+ + + V +R DG +++ C HR PL G
Sbjct: 4 VRNAWYVAGWSTDFGDELVPLTLLAQNLVAYRTSDGQIAVLEDRCPHRLLPLSKGKRIGD 63
Query: 268 RIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPGD----EPPTAT 321
IQC YHG + DG C ++P S ++ + S P E+ G+++IW GD +P A
Sbjct: 64 TIQCGYHGMTFGADGACVRVPGQSNLPKSAYVDSYPVLERHGIVFIWMGDADKADPALAF 123
Query: 322 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK-- 377
L G+ +H + + + + +NL+D AH F H +T S VP VK
Sbjct: 124 DMPELGQEGWHVHHGDKLHIRANYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVKTA 183
Query: 378 -----------------FLTPASGLQG---YWDPYPIDMEFRPPCMVLSTIGISKPGKLE 417
F G G W Y + M P + G S KLE
Sbjct: 184 DEVIVAWRWIRDAEPIGFFKAFGGFSGNVDRWHYYYLHM----PSTAVIDFG-SSDAKLE 238
Query: 418 -GQNTRQCATHLHQLHVCLPSSRKKT 442
++ R + LH P + T
Sbjct: 239 LPEDQRNKGVRIFALHFVTPVTEDYT 264
>gi|398824385|ref|ZP_10582719.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. YR681]
gi|398224947|gb|EJN11235.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. YR681]
Length = 349
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 125/307 (40%), Gaps = 38/307 (12%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++K + + V++R DG +++ C HR PL G + +
Sbjct: 8 NAWYAAAWDAEVKPALLPRTICGKHVVMYRKADGSVAALEDACWHRLVPLSKGRLEGDTV 67
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG +Y+ G+C MPS + N +++ P E+ IW+W GD P P L+P
Sbjct: 68 VCGYHGLKYNAQGRCTFMPSQETINPSACVRAYPVVERHRYIWLWMGD--PALADPALVP 125
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------WSVPSLV 376
+ + + ++ L+LDNL+DL H F H S+ + V
Sbjct: 126 DMHWNHDPAWAGDGKTIRVNCDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHGE 185
Query: 377 KFLTPASGLQG-----YW-----DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTR 422
K +T ++G +W P +D + F PC + +G++ G + R
Sbjct: 186 KTVTVTRWMRGIEAPPFWAKQLGKPGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGDR 245
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 482
+ L+ P + K + ++ + + R + +ED ++
Sbjct: 246 SQGVNGFVLNTITPETEKTCHYFWAFVRNYQIGEQRITTEI---REGVSGIFHEDELILE 302
Query: 483 GQQERMN 489
QQ M+
Sbjct: 303 AQQRAMD 309
>gi|87124080|ref|ZP_01079930.1| cell death suppressor protein [Synechococcus sp. RS9917]
gi|86168649|gb|EAQ69906.1| cell death suppressor protein [Synechococcus sp. RS9917]
Length = 439
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 218 WFPVAFSTDLKDDTMEPWVIFRG--------KDGIPGCVQNTCAHRACPLHLGSVN-EGR 268
W+PVA+ DL + + + G + C HR PL G +N EG+
Sbjct: 9 WWPVAYLCDLDRGRPSRFTLLERDLVLWWDREAGQWRAFDDVCPHRLVPLSEGRINAEGQ 68
Query: 269 IQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
++CPYHGW + G C ++P + R +SLP +G++++W GD P +
Sbjct: 69 LECPYHGWSFDGSGHCRRIPQMTEEARPEGRRSSCRSLPTASAQGLLFVWSGD--PASAD 126
Query: 323 PCLLP------------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 370
P LP G+ + + +LP++ LL+N+LD++H PFTH T +
Sbjct: 127 PAALPLVPVLQEQGEGWADGWVVQ-DTFRDLPMDALTLLENVLDVSHVPFTHHRTVGRRD 185
Query: 371 SVPSLVKFLT--PASGLQGYWDPYP 393
+ + +T +G + +W P
Sbjct: 186 NAAPVQAEITREDGTGFEAFWQEGP 210
>gi|333902226|ref|YP_004476099.1| vanillate monooxygenase [Pseudomonas fulva 12-X]
gi|333117491|gb|AEF24005.1| Vanillate monooxygenase [Pseudomonas fulva 12-X]
Length = 354
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 123/312 (39%), Gaps = 44/312 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + + E V +RG +G +++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDEIAEKPLGRQICGEKIVFYRGAEGQVVALEDFCPHRGAPLSLGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPT--ATIPCL 325
+ C YHG E +GK MP ++R I++ E+ G IW+W GD+ ATI L
Sbjct: 64 LICGYHGLEMGCEGKTVSMPGQRVRGFPGIRAFAAVERYGFIWVWTGDQALADPATIHHL 123
Query: 326 LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW--SVPSLVK----- 377
+ + + + ++ L++DNL+DL H + H S+ + P + K
Sbjct: 124 EWAENPDWAYGGGLFHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTKVEGDE 183
Query: 378 --------------FLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLEGQ 419
F A G D P+D F PP V+ +G++ G +
Sbjct: 184 VITSRHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFNPPSHVMIEVGVAHAGHGGYE 243
Query: 420 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFAEQVLNE 476
+ + P S + M+ F P Q L R ++ +E
Sbjct: 244 APAEVKASSIVVDFITPESETSIWYFWGMARSFK------PEDQALTDSIRQGQGKIFSE 297
Query: 477 DLRLVLGQQERM 488
DL ++ QQ +
Sbjct: 298 DLEMLERQQRNL 309
>gi|294464913|gb|ADE77961.1| unknown [Picea sitchensis]
Length = 480
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 127/304 (41%), Gaps = 49/304 (16%)
Query: 250 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI--------KSL 300
++C HR PL G ++E G +QC YHGW + G C+ +P ++ +
Sbjct: 135 DSCPHRRAPLSEGRIDEDGDLQCSYHGWCFGPKGDCKYIPQEPSDGPRVHTSKRACASTY 194
Query: 301 PCFEQEGMIWIWPGDEP---------PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 351
P +Q+G+IW WP +P IP L PS F + +LP + +L +N
Sbjct: 195 PSLQQQGIIWFWPNTDPQFKDTALEKKPPLIPALSDPS-FPCTLSM-RDLPYGYEILTEN 252
Query: 352 LLDLAHAPFTHTSTFAKG---WSVPSLVKFLTP---------ASGLQGYWDPYPIDMEFR 399
L+D +H P+ H ++ W+ S + P SG +G F
Sbjct: 253 LMDPSHVPYAHYGLGSQTPMPWNNISFKRAGRPLDLCLERLDESGFRG--KQVTGFSNFT 310
Query: 400 PPCMVLS--TIGISKPGK----LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
PPC+ +S T SK GK + G + T + + +C+P S ++RL++ +FA
Sbjct: 311 PPCVYVSHHTFKTSKEGKPQPSISGTEQEKMKT-IFFIFICIPVSPGRSRLIWAFPRNFA 369
Query: 454 SVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQER--MNNGANVWN----LPVGYDKLGVR 507
+ + + H + + + L +ER N G W +P D V
Sbjct: 370 LWMYRL--LPRWLTHIQQNLFPDSDLYFLHLEERKLQNYGKTNWEKACYVPTAADAFVVA 427
Query: 508 YRLW 511
+R W
Sbjct: 428 FRKW 431
>gi|293608775|ref|ZP_06691078.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427423331|ref|ZP_18913489.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-136]
gi|292829348|gb|EFF87710.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425699884|gb|EKU69483.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-136]
Length = 358
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIPC 324
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 63 NLVCGYHGLVTGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALAEEAKLPT 122
Query: 325 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 123 LEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|254512627|ref|ZP_05124693.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium KLH11]
gi|221532626|gb|EEE35621.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium KLH11]
Length = 349
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 15/168 (8%)
Query: 214 LKNFWFPVAFSTD----LKDDTM--EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ A+S D LK +T E V++R +DG P +++ C HR PL G++
Sbjct: 3 LRNCWYVAAWSKDIGRALKAETFLDENIVLYRQEDGTPVALEDACPHRKLPLSKGNLKGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YHG + GKC P+ + R ++S P ++ ++WIW GD P A
Sbjct: 63 LVECGYHGLTFDCSGKCIDSPTQRGMTPRRAVVRSYPVVDRYRLLWIWMGD-PELADPDK 121
Query: 325 LLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
+ P F+ + M++ + + DNLLD +H + H S+FA
Sbjct: 122 IFPIENFDNPGWGLTDGGAMDIDCHYLWVCDNLLDPSHVAWVHVSSFA 169
>gi|339323059|ref|YP_004681953.1| LysR family transcriptional regulator [Cupriavidus necator N-1]
gi|338169667|gb|AEI80721.1| vanillate O-demethylase oxygenase subunit [Cupriavidus necator N-1]
Length = 351
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 130/337 (38%), Gaps = 52/337 (15%)
Query: 214 LKNFWFPVAF-----STDLKDDTME--PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
++N W+ + ++DL T+ P +++R +DG +++ C HR PL +G
Sbjct: 3 VRNTWYVAGWDKEVGASDLFSRTIIGIPVLMYRAEDGTLVAIEDRCCHRGAPLSVGRREG 62
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YHG ++ G+C + P+ Q ++++ P E+ IWIW GD A P
Sbjct: 63 DCVRCMYHGLKFDPTGQCIEAPAQQRIPPQARVRTFPVVERNSWIWIWMGDA--EAADPA 120
Query: 325 LLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG-------- 369
L+P P+ + I + + + L+ DNLLD +H PF H +T
Sbjct: 121 LIPDTHWLDDPAWRSLDGYIHYD--VNYLLIADNLLDFSHLPFVHPTTLGGSEDYAGVQP 178
Query: 370 -------------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
W++ P K + G W+ Y F P ++L G++
Sbjct: 179 TVERLEDGVRITRWTIDTEAPPFAKQVKDWPGKVDRWNIY----NFTLPAILLMDSGMAP 234
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
G + R A P + T + +FA P +
Sbjct: 235 TGTGAQEGRRIDAAEFRGCQALTPETENSTHYFFAHPHNFAI---DQPEVTRSIHQAVVA 291
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ED ++ QQ + + +P D ++R
Sbjct: 292 AFDEDRDIITAQQRSLALAPDFKMIPFSIDAALSQFR 328
>gi|170690598|ref|ZP_02881765.1| Vanillate monooxygenase [Burkholderia graminis C4D1M]
gi|170145033|gb|EDT13194.1| Vanillate monooxygenase [Burkholderia graminis C4D1M]
Length = 352
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L N W+ A S+++ D EP V++R G + + C HR PL G V +
Sbjct: 4 LLNAWYVAALSSEVTADAPLARTLLDEPVVLYRVAGGQAVALADRCPHRFAPLSRGRVVD 63
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
G ++CPYHG + +G+C P R + + P E+ G IW WPGD + P
Sbjct: 64 GALECPYHGLRFGAEGRCVFNPHGDGRVPARAEARHYPVRERYGAIWFWPGDPQRASNTP 123
Query: 324 C-----LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L P F +E + + L DNLLDL+H + H T
Sbjct: 124 LPAFDYLDPQENFT--SERYLHTHANYQLSADNLLDLSHFQYLHPETLGS 171
>gi|421604687|ref|ZP_16046796.1| vanillate O-demethylase oxygenase [Bradyrhizobium sp. CCGE-LA001]
gi|404263204|gb|EJZ28775.1| vanillate O-demethylase oxygenase [Bradyrhizobium sp. CCGE-LA001]
Length = 343
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 125/314 (39%), Gaps = 52/314 (16%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++K + + V++R DG +++ C HR PL G + +
Sbjct: 2 NAWYAAAWDAEVKPALLPRTICGKHIVMYRKADGSVAALEDACWHRLVPLSKGRLEGDTV 61
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG +Y+ G+C MPS + N +++ P E+ IW+W GD P P L+P
Sbjct: 62 VCGYHGLKYNAQGRCTFMPSQETINPSACVRAYPVVERHRYIWLWMGD--PALADPALVP 119
Query: 328 P-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--------- 367
G IH + ++ L+LDNL+DL H F H S+
Sbjct: 120 DMHWNHDPAWAGDGKTIHVK------CDYRLVLDNLMDLTHETFVHGSSIGNEAVAEAPF 173
Query: 368 ------KGWSVPSLVKFLTPAS------GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 415
K +V ++ + P G G D + I + F PC + +G++ G
Sbjct: 174 DVTHGEKTVTVTRWMRDIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTIAIDVGVAPTGT 232
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
+ R + L+ P + K + ++ + + R + +
Sbjct: 233 GAPEGDRSQGVNGFVLNTITPETEKTCHYFWAFVRNYQLGEQRITTEI---REGVSGIFH 289
Query: 476 EDLRLVLGQQERMN 489
ED ++ QQ M+
Sbjct: 290 EDELILEAQQRAMD 303
>gi|22299237|ref|NP_682484.1| Rieske 2Fe-2S family protein [Thermosynechococcus elongatus BP-1]
gi|22295419|dbj|BAC09246.1| Rieske 2Fe-2S family protein [Thermosynechococcus elongatus BP-1]
Length = 357
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
N+ L+N W+ + DLK EP + R G P ++N C HR PLH G
Sbjct: 14 NSFLRNIWYYGLPAADLKPGRCQAKVLLGEPILFCRTTSGKPFALRNLCPHRGMPLHYGR 73
Query: 264 VNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWI-WPGD- 315
+ ++CPYHGW ++ G C +PS L+N + S P E +G +WI +P +
Sbjct: 74 FDGKEVECPYHGWRFNAHGHCTLIPSLTSDSDVDLKNFGVLSYPVREVQGNLWIFFPANG 133
Query: 316 ---EPPTATIPCLLPPSGFEIHAEIVME--LPIEHGLLLDNLLDLAHAPFTH 362
PT +P L+P E + V + P + N +D +HAPF H
Sbjct: 134 RNVSEPTLEVP-LVPGFSAETQPQAVQKFIFPGHLDQVFINFMDPSHAPFVH 184
>gi|422590590|ref|ZP_16665244.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. morsprunorum str. M302280]
gi|330877736|gb|EGH11885.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. morsprunorum str. M302280]
Length = 354
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 49/243 (20%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R +D V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVVDKPLGRQICNEKMVFYRDQDQQIVAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPG+ P L+
Sbjct: 64 LVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAVERYGFIWVWPGEREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP VL +G++
Sbjct: 177 TTVEGEEVITARHMENIMPPPFWKMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAH 236
Query: 413 PGK 415
GK
Sbjct: 237 AGK 239
>gi|428304442|ref|YP_007141267.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
gi|428245977|gb|AFZ11757.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
Length = 441
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 130/305 (42%), Gaps = 59/305 (19%)
Query: 250 NTCAHRACPLHLGSVN--EGRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKS 299
+ C HR PL G V+ G + C YHGW+++ +G+C +P + N + +
Sbjct: 52 DQCPHRLAPLSEGRVDLETGNLMCSYHGWQFNPEGECTHIPQAENPDLIAKNKDNFCVVT 111
Query: 300 LPCFEQEGMIWIWPGDEPP--TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNL 352
LP + G++W+W ++ A+ P L PS GF + + +V +L + L++N+
Sbjct: 112 LPIQQINGLLWVWLDEKSADLAASTPLPLSPSIDASKGF-VWSSMVRDLEYDWQTLVENV 170
Query: 353 LDLAHAPFTHTSTFAK-----------GWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPP 401
D +H PF+H S P L++ A+ +G + + F PP
Sbjct: 171 ADPSHVPFSHHGVQGNRKQAKPIAMEIAQSTPDLIE----ATLSRG----FATRITFEPP 222
Query: 402 CMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF 461
C +LE + C+P S K+R++ + +FA L HV
Sbjct: 223 C------------RLEYAMEFPGGKKFGLVVYCVPVSPGKSRIVGQFPRNFAKTLHHV-- 268
Query: 462 MQYLWRHFAEQ--VLNEDLRLVLGQQERM------NNGANVWNLPVGYDKLGVRYRLWRD 513
+ W H + VL+ D+ L+ Q+ R+ + + +P D L + +R W D
Sbjct: 269 IPRWWDHIQNRNLVLDGDMVLLHYQEHRLQEYESTQSWKTAYKMPTSADLLVIEFRRWFD 328
Query: 514 ALEKG 518
+G
Sbjct: 329 KYCQG 333
>gi|298158512|gb|EFH99579.1| Probable vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 325
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 130/331 (39%), Gaps = 51/331 (15%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 295
V +R ++ +++ C HR PL LG V G++ C YHG DGK MP ++R
Sbjct: 2 VFYRDQNQQVVALEDFCPHRGAPLSLGYVENGQLVCGYHGLVMGGDGKTAAMPGQRVRGF 61
Query: 296 KI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-----VMELPIEHGLLL 349
K+ E+ G IW+WPGD P L+ + + E + + ++ L++
Sbjct: 62 PCNKTFAAVERYGFIWVWPGDREKAD--PALIHHLEWAVSDEWAYGGGLFHIQCDYRLMI 119
Query: 350 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG----------------YW---- 389
DNL+DL H + H S+ + + P + ++G +W
Sbjct: 120 DNLMDLTHETYVHASSIGQ-----KEIDEAAPVTTVEGEEVITARHMENIMPPPFWQMAL 174
Query: 390 ------DPYPIDM----EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSR 439
D P+D F PP VL +G++ GK + + P +
Sbjct: 175 RGNNLADDVPVDRWQICRFTPPSHVLIEVGVAHAGKGGYHAPHEFKASSIVVDFITPETD 234
Query: 440 KKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPV 499
+ M+ +F + + R ++ +EDL ++ QQ+ + L +
Sbjct: 235 TSIWYFWGMARNFNPADEQ---LTATIREGQRKIFSEDLEMLERQQQNLLQHPQRNLLKL 291
Query: 500 GYDKLGVRYRLWRDAL-----EKGAKQLPFM 525
D GV+ R + L A+Q+P M
Sbjct: 292 NIDAGGVQSRKILERLIAAERASTAEQIPVM 322
>gi|27376049|ref|NP_767578.1| dioxygenase [Bradyrhizobium japonicum USDA 110]
gi|27349188|dbj|BAC46203.1| blr0938 [Bradyrhizobium japonicum USDA 110]
Length = 445
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 112/275 (40%), Gaps = 51/275 (18%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVI---------FRGKDGIPGCVQ 249
K L SGP L+ FW PV S +L + EP I FR G+ G +
Sbjct: 8 KFLTESGPGTGMGELLRRFWIPVLLSKELPEADGEPKKIVVLGEELLAFRDSRGVVGVID 67
Query: 250 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFE 304
C HR L LG E I+C YHGW++ TDG+C MP++ ++IKS P E
Sbjct: 68 QYCPHRGANLWLGRNEECGIRCVYHGWKFDTDGRCVDMPTSYPDLNAKDLIRIKSYPVRE 127
Query: 305 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL------------LDNL 352
MIW + G +P L E+ M LP H + L+
Sbjct: 128 WGEMIWAYMGPADVMPELPDL----------EMAM-LPASHRYVSKKWQDCNWVQALEGS 176
Query: 353 LDLAHAPFTHTSTFAKGWSVPSLVK-FLTPASGLQG---YW---DPYPIDMEFRPPCMVL 405
+D AH F H S + + + K F+ P + + W DP P+ ++ P L
Sbjct: 177 IDTAHFTFAHLSFDKEENEILDIKKHFVNPIARMSSDHMRWIAEDPRPV-IKIAPHDAGL 235
Query: 406 STIGISKPGKLEGQNTR--QCATHLHQLHVCLPSS 438
S G G+L G + + A L H PS+
Sbjct: 236 SIAG----GRLTGSDNIYWRIAQFLMPFHAYAPSA 266
>gi|119504455|ref|ZP_01626534.1| Rieske (2Fe-2S) region protein [marine gamma proteobacterium
HTCC2080]
gi|119459477|gb|EAW40573.1| Rieske (2Fe-2S) region protein [marine gamma proteobacterium
HTCC2080]
Length = 364
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 14/168 (8%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L N W+ A+++++ D +P VI++ + G+ + N C HR+ PL +G +
Sbjct: 9 LYNCWYAAAWTSEIDDGKPFSRTLLEKPIVIYKNESGVYVALDNRCCHRSAPLSMGRIEG 68
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGD--EPPTATI 322
++C YHG +Y G+C ++P N ++ S P ++ GM+WIW G+ + + I
Sbjct: 69 DCLRCMYHGMKYDPSGQCVEIPGQAKISSNHRVHSYPLVDRGGMLWIWMGEAHKANSDDI 128
Query: 323 PCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P P P + + L++DNL D +H F HTST
Sbjct: 129 PHFEPLDDPQWCGLPNRCYLHYDANWMLIVDNLADFSHLAFVHTSTLG 176
>gi|429333553|ref|ZP_19214247.1| vanillate monooxygenase [Pseudomonas putida CSV86]
gi|428761753|gb|EKX83973.1| vanillate monooxygenase [Pseudomonas putida CSV86]
Length = 358
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ F+ +LKD + +P V+FR DG P +++ C HRA PL G++ E +
Sbjct: 25 NQWYVAGFAWELKDKPVGRTLLGKPVVLFRTADGQPAALEDRCCHRALPLSHGTLEEQGV 84
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF---EQEGMIWIW--------PGDEPP 318
+C YHG ++ G+C ++P K K +P + E++ ++WIW P EPP
Sbjct: 85 RCGYHGLLFNGAGQCLEVPGQAKVPTKAK-VPAYHVRERDQILWIWFGSADHKEPTYEPP 143
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
T I SG ++ V + L+ DNLLDL+H + H T
Sbjct: 144 TYDIHS----SGEYLYEGDVYHYDAPYQLIHDNLLDLSHLGYVHLRTIG 188
>gi|87303595|ref|ZP_01086374.1| cell death suppressor protein Lls1-like [Synechococcus sp. WH 5701]
gi|87281819|gb|EAQ73783.1| cell death suppressor protein Lls1-like [Synechococcus sp. WH 5701]
Length = 457
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 126/307 (41%), Gaps = 41/307 (13%)
Query: 215 KNFWFPVAFSTDLK----------DDTMEPWVIFRGKDGIPG----CVQNTCAHRACPLH 260
+N W+PVAF DL D + W +G PG + C HR PL
Sbjct: 22 RNAWYPVAFLRDLDPARPTGFTLLGDDLVLWFDRKGDAAQPGGQWRAFADVCPHRLVPLS 81
Query: 261 LGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQL------RNVKIKSLPCFEQEGMIWIWP 313
G +N G ++CPYHGW + G+C +P R ++ +GM++++
Sbjct: 82 EGRLNAAGELECPYHGWTFDGQGRCTAIPQASEGSQPSDRRSSCRAYATASGQGMLFVFA 141
Query: 314 GDEPPTATIPCLLPPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
G A +P L P E A + +LP + LL+N+LD++H PFTH +T +
Sbjct: 142 GAPEAAAAVPLPLVPVLEETEAGWLVQDTFRDLPYDALTLLENVLDVSHVPFTHHATVGR 201
Query: 369 GWSVPSLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCAT 426
+ + L A G G W+ P R + PG + T +
Sbjct: 202 RETAGPVDLRLEQAGPGGFSGVWEEGP-----RRGKLGSQFTTFLAPGLMWHDLTARGFA 256
Query: 427 HLHQLHVCLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRHFAEQVLNEDLRLV 481
+ + P+ + RL R F S +L+ P Q+L +H + ED ++
Sbjct: 257 RILTVVYATPTRPGECRLFARFPFQFESSWPGRLLRLRP--QWL-QHIGNHTVLEDDQIF 313
Query: 482 LGQQERM 488
L QER+
Sbjct: 314 LHWQERV 320
>gi|148253687|ref|YP_001238272.1| vanillate O-demethylase oxygenase, iron-sulfur subunit
[Bradyrhizobium sp. BTAi1]
gi|146405860|gb|ABQ34366.1| vanillate demethylase subunit A [Bradyrhizobium sp. BTAi1]
Length = 347
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 129/328 (39%), Gaps = 42/328 (12%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++K + + V++R DG +++ C HR PL G + +
Sbjct: 8 NAWYAAAWDAEVKQALLPRTICGKHVVMYRKADGSIAALEDACWHRLVPLSKGRLEGDTV 67
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG ++S G+C MPS + N +++ P E+ IW+W GD P P +P
Sbjct: 68 VCGYHGLKFSPQGRCTFMPSQETINPSACVRAYPAVERHRFIWLWMGD--PALADPATIP 125
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------GW 370
+ +++ ++ L++DNL+DL H F H S+ G
Sbjct: 126 DMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHGE 185
Query: 371 SVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
++ + F G G D + I + F PC V +G++ G +
Sbjct: 186 RTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTVTIDVGVAPTGTGAPEGD 244
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
R + L+ P + K + + ++ + + R + ED ++
Sbjct: 245 RSQGVNGMVLNTITPETDKTCHYFWAFARNYQLTEQR---LTTEIREGVSGIFREDELIL 301
Query: 482 LGQQERM--NNGANVWNLPVGYDKLGVR 507
QQ M N G +NL + + R
Sbjct: 302 EAQQRAMDANPGRVFYNLNIDAGAMWAR 329
>gi|393760646|ref|ZP_10349453.1| vanillate O-demethylase oxygenase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393161144|gb|EJC61211.1| vanillate O-demethylase oxygenase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 347
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 26/173 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ A + L + E V++R +DG P ++++C HR PL G +
Sbjct: 3 VRNAWYVGALAAQLGRSLLPVRMLSENLVLYRREDGQPVALEDSCPHRRLPLSKGRLIGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+++C YHG + G C K P ++ ++S PC E+ G++W+W GD P L
Sbjct: 63 QVECGYHGLTFDCSGSCTKAPGVAQIPKSAVVRSYPCAERYGLVWVWMGD-------PAL 115
Query: 326 LPPSG-----------FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
PS + ++ MEL + + DNLLD +H + H S+F
Sbjct: 116 ADPSKLIDIPEWDNPEWGVNRGDAMELDCNYLYVTDNLLDPSHVSWVHQSSFG 168
>gi|443478861|ref|ZP_21068556.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena biceps
PCC 7429]
gi|443015788|gb|ELS30604.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena biceps
PCC 7429]
Length = 329
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMEPW-------VIFRGKDGIPGCVQNTCAHRACPLHLGS 263
++ K FW+PV + L ++ + + V++ +G P + C HR+ L LGS
Sbjct: 6 HSLFKRFWYPVIPMSLLAEEQPKSFQLLGQKIVLWIDAEGKPAAALDRCCHRSAHLSLGS 65
Query: 264 VNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGD--- 315
V +G I C YHGW+Y G C +P +N +I + C E+ G +W+ GD
Sbjct: 66 VKQGAIACAYHGWQYDRSGSCLHVPQLPTDTPIPKNYRIHTFACEERYGYVWVCMGDPIN 125
Query: 316 ---EPPTATIPCL-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
E P A+ P L P +E+ + +++N +DLAH F HT+TF
Sbjct: 126 KIAEIPEASDPQFRLIPEFYEVWNCAGLR-------VMENEMDLAHPTFVHTTTFGSA 176
>gi|428209012|ref|YP_007093365.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428010933|gb|AFY89496.1| Rieske (2Fe-2S) iron-sulfur domain protein [Chroococcidiopsis
thermalis PCC 7203]
Length = 351
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 16/173 (9%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ VA S ++ + + + I+RG DG +++ C HR L G V + +
Sbjct: 21 NHWYAVARSREVTTNPIAVTLWHQAIAIYRGNDGKVYALEDRCPHRQVKLSHGRVVDNNL 80
Query: 270 QCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEP-PTATIPC 324
+C YHGW + +G+C +P + +L N KI+ P EQ+G +W++PGD T P
Sbjct: 81 ECAYHGWRIAGNGECVDVPYLATNQKLPNCKIRHYPIREQDGFVWLFPGDRNLATQLQPL 140
Query: 325 LLPPSGF--EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 375
LP I ++E + L++NL+D+ H H + W+ P L
Sbjct: 141 GLPEWDHLNYIATVSIIECAAHYSYLIENLMDMYHG---HLHQSWQAWADPIL 190
>gi|264677972|ref|YP_003277879.1| Rieske iron-sulfur protein [Comamonas testosteroni CNB-2]
gi|262208485|gb|ACY32583.1| Rieske iron-sulfur protein [Comamonas testosteroni CNB-2]
Length = 354
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A S++L D + E V+FR DG +++ C HRA PL G+V +
Sbjct: 23 NQWYVAAHSSELADKPVGRKLLGEAVVLFRIGDGTVAALEDRCCHRALPLSAGTVESCGL 82
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQE--GMIWIWPGDEPPTATIPCLLP 327
+C YHG Y+ +GKC ++P + K K L QE G+IWIW G +P C P
Sbjct: 83 RCGYHGLLYNHEGKCVEIPGQEKIPSKAKVLAYHVQERDGLIWIWFG-KPENPEPMCDAP 141
Query: 328 PSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFA 367
E V + H L+ DNLLDL+H + H T
Sbjct: 142 SYSVHSSPEYVYGGDVYHYNAPYQLIHDNLLDLSHLGYVHLHTIG 186
>gi|421172490|ref|ZP_15630260.1| vanillate monooxygenase [Pseudomonas aeruginosa CI27]
gi|404537756|gb|EKA47339.1| vanillate monooxygenase [Pseudomonas aeruginosa CI27]
Length = 361
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 18/167 (10%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A S +LKD + +P V+FR DG +++ C HRA PL G++ E +
Sbjct: 29 NQWYVAALSWELKDKPVGRTLLNKPVVLFRMGDGQVAALEDRCCHRALPLSNGTLEEAGV 88
Query: 270 QCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+C YHG ++ GKC ++P K+ + E++ ++WIW G + A+ P P
Sbjct: 89 RCGYHGLLFNQAGKCVEIPGQDKIPSKAKVPAYHVRERDQIVWIWFGAD--AASEPDCEP 146
Query: 328 PSGFEIHA--EIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFA 367
P+ +E+H+ + V + + H L+ DNL+DL+H + H T
Sbjct: 147 PA-YEVHSSGKYVFDGSVYHYDAPYQLIHDNLMDLSHLGYVHLKTIG 192
>gi|218246485|ref|YP_002371856.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8801]
gi|218166963|gb|ACK65700.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8801]
Length = 370
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 150/350 (42%), Gaps = 39/350 (11%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHL 261
P ++ L+N W+ LK M EP ++ R +DG +++ C HR PL
Sbjct: 21 PMSSLLRNAWYVALPGKQLKPGKMTHKKMLGEPVLVGRREDGEVFAMRDICPHRGIPLQY 80
Query: 262 GSVNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-- 312
G + + C YHGW+++T DG+C ++PS + +++ + PC E +G IW++
Sbjct: 81 GWLEGDGVCCCYHGWKFNTSDGRCSEIPSLTEYDDLDISRIRVPTYPCREVQGNIWVYFA 140
Query: 313 --------PGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
P + PP TIP + P I I I+H ++ L+D AH P+ H
Sbjct: 141 EDSKKEINPSELPPVPTIPDFGKVEPG---ISETIHFACHIDHAII--GLMDPAHGPYVH 195
Query: 363 TSTFAKGWSVPSLVKFLTPASGLQGY-WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
+S + + VK QG+ PY + + RP ++ + + I E +
Sbjct: 196 SSWWWRSGPRKFRVKEKQYEPVAQGFRLVPYDMPVSARPYKILGNQVSIEI--VFELPSV 253
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM---QYLWRHFAEQVLNEDL 478
R + CL ++ T + F S+ +P+M + L Q L +D
Sbjct: 254 RTEILRGDRYSACLLTT--ITPIDENECEAFQSIYWTIPWMGLFKPLLSLLTRQFLAQDR 311
Query: 479 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
+V+ QQE + + + + +RL ++ + A+ PF P+
Sbjct: 312 DVVIQQQEGLKYNPALMLIDDADTQAKWYFRLKQEYQKSQAENRPFKNPV 361
>gi|149916805|ref|ZP_01905307.1| dioxygenase, iron-sulfur subunit, putative [Plesiocystis pacifica
SIR-1]
gi|149822522|gb|EDM81911.1| dioxygenase, iron-sulfur subunit, putative [Plesiocystis pacifica
SIR-1]
Length = 376
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N+W+PV +S DL + + + +FRG DG V++ CAHR L G V +
Sbjct: 28 NYWYPVGYSKDLAPGEVTKVTFWGKDFALFRGSDGSLRAVEDRCAHRQLALSGGEVRGCQ 87
Query: 269 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT--- 321
+ CPYHGW + DG+ +P +L +++ E+ G++W++PGD T
Sbjct: 88 VVCPYHGWTFDGDGRLVDVPHELFDKKLPKIRLPDFAVRERYGLMWLFPGDRDRAETVAM 147
Query: 322 --IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHA 358
IP L P + + H +++DN+ D HA
Sbjct: 148 PEIPELEGPDAWAC-VPVDFTWQAHHSMIIDNVSDFTHA 185
>gi|445407257|ref|ZP_21432263.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-57]
gi|444781031|gb|ELX04954.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-57]
Length = 358
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP ++ K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPVQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|398849602|ref|ZP_10606336.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
gi|398250670|gb|EJN35978.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
Length = 357
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 20/171 (11%)
Query: 218 WFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
W+ A S +LKD + +P V+FR D +++ C HRA PL G+V E ++C
Sbjct: 25 WYVAALSRELKDQPLGRTLLNKPVVLFRTADNQVAALEDRCCHRALPLSGGTVEERGLRC 84
Query: 272 PYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIPCLLPP 328
YHG ++ GKC ++P K+ + P EQ+ +IWIW G E P P PP
Sbjct: 85 GYHGLLFNEGGKCIEIPGQDKIPSKAKVPAYPVREQDQIIWIWFGSAEHPE---PTFAPP 141
Query: 329 SGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 372
+++H+ V + L+ DNL+DL+H + H T S+
Sbjct: 142 V-YDVHSSGKYLFDGDVYHYDAPYQLIHDNLMDLSHLGYVHLHTIGGNASI 191
>gi|444913675|ref|ZP_21233824.1| hypothetical protein D187_05994 [Cystobacter fuscus DSM 2262]
gi|444715498|gb|ELW56364.1| hypothetical protein D187_05994 [Cystobacter fuscus DSM 2262]
Length = 341
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 212 TRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
RL + WF + S++L D + P V+FR +G P + + C HR PL LG V
Sbjct: 2 VRLPHSWFILCTSSELGDKPLARMLQGSPLVLFRTAEGKPAALADRCPHRNVPLSLGRVV 61
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSL-----PCFEQEGMIWIW--PGDEPP 318
+G++QC YHGW + + G+C +P + + KS EQEG +W++ PG EP
Sbjct: 62 KGQLQCGYHGWRFDSSGQCRAVPGL-IGEPEAKSRCATWHATREQEGFVWVYSTPGVEPS 120
Query: 319 TA--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
P L P G+ + H LL+N LD+ H F H F
Sbjct: 121 HEPYRFPLLDAP-GYSTVRRTLRAGGSLHA-LLENTLDVPHTSFLHGGLF 168
>gi|440737591|ref|ZP_20917155.1| oxidoreductase subunit alpha [Pseudomonas fluorescens BRIP34879]
gi|440381947|gb|ELQ18460.1| oxidoreductase subunit alpha [Pseudomonas fluorescens BRIP34879]
Length = 346
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 49/243 (20%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L + E V +R +++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDELAQKPLGRQICGEKLVFYRDHTDQVRALEDFCPHRGAPLSLGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+P
Sbjct: 64 LVCGYHGLVMGGDGKTVEMPGQRVRGFPCNKAFAAVERHGFIWVWPGDQ--AQADPALIP 121
Query: 328 -----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
S + + ++ ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWADSEHWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP V+ +G++
Sbjct: 177 TTVEGDEVVTARHMQNIMAPPFWRMALRGNQLADDVPVDRWQICRFSPPSHVMIEVGVAH 236
Query: 413 PGK 415
GK
Sbjct: 237 AGK 239
>gi|148556315|ref|YP_001263897.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501505|gb|ABQ69759.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 345
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 16/170 (9%)
Query: 214 LKNFWFPVAFSTDLKDD-----TMEPWVIFRGKDGIP-GCVQNTCAHRACPLHLGSVNEG 267
L+N W+ ++ +L + T+ I +DG V + C HR PLH+G +
Sbjct: 4 LRNCWYVAGWADELAEGAPLARTIAGEAILFWRDGASLFAVADRCPHRLAPLHMGRTDGA 63
Query: 268 RIQCPYHGWEY-STDGKCEKMPSTQLRN-VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
++C YHG + G+C P + + + I++ PC E+ ++W+W GD P P
Sbjct: 64 TVRCGYHGLAFDGVSGRCTDNPHGAITSALAIRTYPCVERHRILWVWTGD--PDRADPAD 121
Query: 326 LPPSGF------EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
+P GF ++ M H LL DN+LDL+HA + H +T G
Sbjct: 122 IPDMGFVDRAGEHAFSKGYMHTAAGHKLLEDNILDLSHADYLHPATLGGG 171
>gi|443326458|ref|ZP_21055111.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
gi|442793912|gb|ELS03346.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
Length = 435
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 121/289 (41%), Gaps = 40/289 (13%)
Query: 250 NTCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMP--------STQLRNVKIKS 299
+ C HR PL G +++ + C YHGW++ T G C ++P + + +N
Sbjct: 50 DRCPHRLAPLSEGRIDDKTDNLMCSYHGWQFETKGNCTRIPQADNPELIAKKSQNFCATV 109
Query: 300 LPCFEQEGMIWIWPGDEPPTATIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNL 352
PC ++ ++W+W P LP S GF + + +V +L + L++N+
Sbjct: 110 FPCRQENDLLWVWMDASSPEIAAITALPLSPQIDASKGF-VWSSMVRDLEYDWQTLVENV 168
Query: 353 LDLAHAPFTHTSTFA---KGWSVPSLVKFLTPASGLQGYWD-PYPIDMEFRPPCMVLSTI 408
D +H PF H + +P L + ++ D P+ + F PPC + +
Sbjct: 169 ADPSHVPFAHHGIQGNRDRAHPIP-LDIIRSEIDLIEAKVDKPFKTTITFEPPCRLEYAL 227
Query: 409 GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRH 468
K G T C+P S K+R++ + S +FA+ L + W H
Sbjct: 228 TFGDEIKKIGLIT-----------YCIPVSPGKSRIVAQFSRNFATKLHKL--TPRWWDH 274
Query: 469 FAEQVLNEDLRLVLGQQE----RMNNGANVWNLPVGYDKLGVRYRLWRD 513
+ L D +VL Q+ + N + +P D+L + +R W D
Sbjct: 275 IQNRNLILDGDMVLLHQQESFLQHTNWKTAYKMPTSADRLVIEFRSWFD 323
>gi|359464344|ref|ZP_09252907.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 481
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 138/350 (39%), Gaps = 57/350 (16%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLK------------------DDTMEPWVIFRGKDGIPG 246
G P ++ W P+A+ DL D + E W +F
Sbjct: 32 GGEDPSQFTWQDAWHPIAYVKDLDPYQLSTFTLLEQDLVIWWDQSAETWRVF-------- 83
Query: 247 CVQNTCAHRACPLHLGSVN-EGRIQCPYHGWEYSTDGKCEKMPST-------QLRNVKIK 298
+ C HR PL G + +G ++CPYHGW +S G+C ++P Q R ++
Sbjct: 84 --ADQCPHRLAPLSEGRLTADGLLECPYHGWAFSGLGQCCRIPQQVGGQSVEQSRRACVQ 141
Query: 299 SLPCFEQEGMIWIWPGDEPPTATIPC-LLPPSGFEIHAEIVM----ELPIEHGLLLDNLL 353
SLP ++GM++++PG A IP L+ P + IV+ +LP + LL+N+L
Sbjct: 142 SLPTTVRQGMLFVYPGQSERAAHIPIPLVAPLEEAPNKWIVLDGVRDLPFDVLTLLENVL 201
Query: 354 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
D +H PF H + SV + S QG+ + + + P
Sbjct: 202 DPSHLPFAHHRSVGDR-SVAGPMDLEINHSDRQGFQGIWKTAVGPKKGQFGTQLTTFIAP 260
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRH 468
+ T Q + C P + + RL R FAS ++++ P + H
Sbjct: 261 NLIWHDLTTQEKNRTLTVAYCTPIRKGECRLFARFPFQFASPWPAGLIRYTPSWVF---H 317
Query: 469 FAEQVLNEDLRLVLGQQER----MNNG---ANVWNLPVGYDKLGVRYRLW 511
+ + ED ++ L QER G A + +P D+ V W
Sbjct: 318 LLQNSILEDDQIFLYLQERHLAQQRQGMPIAQAFYMPTQADRFVVALHQW 367
>gi|221065066|ref|ZP_03541171.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
gi|57116474|gb|AAW33716.1| IvaA [Comamonas testosteroni]
gi|220710089|gb|EED65457.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
Length = 359
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 23/183 (12%)
Query: 200 SLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCA 253
+++ + P P + W+ F+ +LKD + +P V+FR +DG +++ C
Sbjct: 7 TMSAAAPAFPLDQ-----WYVAGFAWELKDLPVARTLLGQPVVLFRTEDGRVAALEDRCC 61
Query: 254 HRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWI 311
HR PL G+V ++C YHG +S +G+C ++P + K +KS E++ ++WI
Sbjct: 62 HRELPLSCGTVEAAGLRCGYHGLLFSHEGQCLEIPGQERIPTKACVKSFELRERDQILWI 121
Query: 312 WPGDEPPTATIPCLLPPSGFEIHAEI-------VMELPIEHGLLLDNLLDLAHAPFTHTS 364
W G P ++P PP+ + +H++ V + L+ DNLLDL+H + H
Sbjct: 122 WMGATP--DSVPGTEPPA-YAVHSDPQYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHLK 178
Query: 365 TFA 367
T
Sbjct: 179 TIG 181
>gi|330993701|ref|ZP_08317635.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter sp.
SXCC-1]
gi|329759275|gb|EGG75785.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter sp.
SXCC-1]
Length = 353
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 25/179 (13%)
Query: 212 TRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
T L FW+PVA D+ D + EP V++R + I + C HR PL LGS +
Sbjct: 19 TILARFWYPVALERDVGDRPVAAMLLDEPLVVYRAGEDI-VIAHDLCPHRGVPLSLGSGD 77
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWI-------WPG 314
G I C YHG+ + G+C ++P+ + +++ P + G+IW WP
Sbjct: 78 GGSIACAYHGFRFGAAGRCVRIPAHPDHAIPSKMHLRTYPAIRRYGLIWTCLRPDGQWPD 137
Query: 315 DEP---PTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
D A IP L+P +GF+ +++ G ++ LD+AH F HT+TFA
Sbjct: 138 DATAIMANADIP-LMPHWQDAGFQQIVCPSIDIHGFAGRQMEGFLDVAHFAFVHTATFA 195
>gi|374573646|ref|ZP_09646742.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM471]
gi|374421967|gb|EHR01500.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM471]
Length = 353
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 112/292 (38%), Gaps = 50/292 (17%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 295
V++R DG +++ C HR PL G + + C YHG +Y+ G+C MPS + N
Sbjct: 34 VMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGRCTFMPSQETINP 93
Query: 296 K--IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP-----------SGFEIHAEIVMELP 342
+++ P E+ IW+W GD P P L+P G IH
Sbjct: 94 SACVRAYPVVERHRYIWLWMGD--PALADPALVPDLHWNHDPAWAGDGKTIHVN------ 145
Query: 343 IEHGLLLDNLLDLAHAPFTHTSTFA------------------------KGWSVPSL-VK 377
++ L+LDNL+DL H F H S+ +G P K
Sbjct: 146 CDYRLVLDNLMDLTHETFVHGSSIGNEAVAEAPFDVTHGEKTVTVTRWMRGIEAPPFWAK 205
Query: 378 FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPS 437
L G G D + I + F PC + +G++ G + R + L+ P
Sbjct: 206 QLGKEPGKSGLVDRWQI-IRFEAPCTIAIDVGVAPTGTGAPEGDRSQGVNGFVLNTITPE 264
Query: 438 SRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 489
+ K + ++ + + R + +ED ++ QQ M+
Sbjct: 265 TEKTCHYFWAFVRNYQLGEQRITTEI---REGVSGIFHEDELILEAQQRAMD 313
>gi|334132860|ref|ZP_08506615.1| Putative vanillate O-demethylase oxygenase subunit A
[Methyloversatilis universalis FAM5]
gi|333441770|gb|EGK69742.1| Putative vanillate O-demethylase oxygenase subunit A
[Methyloversatilis universalis FAM5]
Length = 364
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 122/313 (38%), Gaps = 45/313 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L + W+ A S+++ + + +I+R +G P + + C HR PLHLG
Sbjct: 17 LTDCWYVAALSSEVPAEGLFHRRILDTSVLIYRKAEGAPVALHDRCPHRFAPLHLGKRIG 76
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
+ C YH + G C P + K++S P E+ G +WIW GD P
Sbjct: 77 DDVVCAYHALRFDCSGACTHNPHGNGLIPKAAKVRSFPLLEKYGFVWIWMGDA--ALADP 134
Query: 324 CLLPPSG--FEIH----AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSVPSLV 376
LP G + H A M + + + L++DN++DL+H H+ + +G P +
Sbjct: 135 AKLPDFGPLDDGHPNALAHTYMRMDVNYELIIDNVMDLSHIDHVHSEIISTRGQLSPLVP 194
Query: 377 KFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGISKPGK 415
A + W+ P P D+ + PP + T+ +
Sbjct: 195 AVKEGADSVNARWEWSQQPAMLIFANFLPDPAAPARHFFDITWTPPANIQLTVAAVQD-- 252
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
+G T + T + LH C P S T + + M+ H A + N
Sbjct: 253 -DGPLTLEHCTGQYDLHTCTPESATTTHYYFATRRNHDVENAEYNAMKIRAMHAAFE--N 309
Query: 476 EDLRLVLGQQERM 488
ED ++ Q+ M
Sbjct: 310 EDGPVIQATQDEM 322
>gi|383780897|ref|YP_005465463.1| hypothetical protein AMIS_57270 [Actinoplanes missouriensis 431]
gi|381374129|dbj|BAL90947.1| hypothetical protein AMIS_57270 [Actinoplanes missouriensis 431]
Length = 399
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 28/179 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTMEP---------WVIFRG-KDGIPGCVQNTCAHRACPLHLGS 263
LKNFW+ V FS + T +P V++R + G + + C HR L G
Sbjct: 2 LKNFWYAVEFSAHV---TTKPERITVLGQHLVVYRTPRQGRVVALSDLCVHRGAALSGGW 58
Query: 264 VNEGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPP 318
+ + +I CPYHGWEY DG C K+P+ + ++ S P E+ G +W++ GD P
Sbjct: 59 LKDDKIVCPYHGWEYEPDGACTKIPANLPGRGIPKKARVDSYPVQEKYGFVWVFMGDLPE 118
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHG---------LLLDNLLDLAHAPFTHTSTFAK 368
+ P + P F+ E + + G +L+N D+AHAPF H F
Sbjct: 119 SERPPIPVWPE-FDDLVENGGKFRVVTGEFLWNANYERILENGCDIAHAPFVHAGRFGN 176
>gi|294651298|ref|ZP_06728621.1| vanillate O-demethylase oxygenase [Acinetobacter haemolyticus ATCC
19194]
gi|292822811|gb|EFF81691.1| vanillate O-demethylase oxygenase [Acinetobacter haemolyticus ATCC
19194]
Length = 358
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ ++ D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEILDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ + K+ E+ G IWIWPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRTHGFPCNKAYAVIEKYGFIWIWPGEK--ALADESKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWAEHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|260557454|ref|ZP_05829669.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
ATCC 19606 = CIP 70.34]
gi|260409080|gb|EEX02383.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
ATCC 19606 = CIP 70.34]
gi|452953922|gb|EME59331.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii MSP4-16]
Length = 358
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP ++ K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPVQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIHCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|428208093|ref|YP_007092446.1| Pheophorbide a oxygenase [Chroococcidiopsis thermalis PCC 7203]
gi|428010014|gb|AFY88577.1| Pheophorbide a oxygenase [Chroococcidiopsis thermalis PCC 7203]
Length = 474
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 137/343 (39%), Gaps = 40/343 (11%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVIFRGKDGI-----PGC---VQNTCAH 254
++G P + W+PV + DL P+ + I C ++ C H
Sbjct: 18 LAGGTDPAFFDCQEVWYPVHYVQDLDKSKPTPFTLLGQDIAIWWEQQAECWRVFEDKCPH 77
Query: 255 RACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLPCF-EQ 305
R PL G + E G ++CPYHGW ++ G C+++P ++SLP +
Sbjct: 78 RLAPLSQGRIAEDGLLECPYHGWAFAGAGDCQRIPQQVAGQAAVTSPRACVRSLPTIVVK 137
Query: 306 EGMIWIWPGD-EPPTATIPCLLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPF 360
+G+++++PG E T T ++ P + + + +LP + L++N+LD +H PF
Sbjct: 138 QGLLFVYPGKAENATKTKVPVIEPLEESLEGWVCIDTFRDLPYDALTLMENVLDASHVPF 197
Query: 361 THTSTFAKGWSVPSLVKFLTPAS--GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL-E 417
TH + + S+ + + G G W P R + PG +
Sbjct: 198 THHRSVGNRANASSVELEVVESGKHGFTGVWQEGP-----RRGTLGRQDTTFVAPGLMWH 252
Query: 418 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLN 475
++Q L ++ P + + RL R FAS L + + H + +
Sbjct: 253 DLTSKQFGRTLTAVYAT-PIRKGECRLFARFPFKFASKLPGWIIKLTPRWYSHLGQNSVL 311
Query: 476 EDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
ED ++ L QER N + LP D V R W
Sbjct: 312 EDDQIFLHYQERYLEAGGGSGNFTKAFYLPTQADAFVVELRQW 354
>gi|447916147|ref|YP_007396715.1| oxidoreductase subunit alpha [Pseudomonas poae RE*1-1-14]
gi|445200010|gb|AGE25219.1| oxidoreductase subunit alpha [Pseudomonas poae RE*1-1-14]
Length = 346
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 49/243 (20%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ +L + E V +R +++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDELAHKPLGRQICGEKLVFYRDHTDQVRALEDFCPHRGAPLSLGYVENGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+P
Sbjct: 64 LVCGYHGLVMGGDGKTVEMPGQRVRGFPCNKAFAAVERHGFIWVWPGDQ--AQADPALIP 121
Query: 328 -----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
S + + ++ ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HLEWADSEHWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPV 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ ++G +W D P+D F PP V+ +G++
Sbjct: 177 TTVEGDEVVTARHMQNIMAPPFWRMALRGNQLADDVPVDRWQICRFSPPSHVMIEVGVAH 236
Query: 413 PGK 415
GK
Sbjct: 237 AGK 239
>gi|308205532|gb|ADO19015.1| rieske (2Fe-2S) domain protein [Nostoc flagelliforme str.
Sunitezuoqi]
Length = 336
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 214 LKNFWFPVAFSTDLKDD------TMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKNFW+ FS+ + D + +V++R + C HR L G +
Sbjct: 9 LKNFWYACEFSSVITDKPKRVPLLSQQFVLYRNSQKQIVAFLDQCPHRGAALSNGWLEND 68
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDE-----P 317
I+CPYHGW+Y DG C ++P+ Q + ++ + P E+ G +W++ GD P
Sbjct: 69 CIRCPYHGWKYQADGTCIEIPANQPGVPISKKARLITYPVQEKYGFVWLFWGDLPQRECP 128
Query: 318 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
P + P + PS + E + + L++N +D AH+ F H ++F G
Sbjct: 129 PLPSFPEVKDPSLRSV--EFEFKWNAHYTRLVENSIDPAHSAFVHANSFGSG 178
>gi|2271500|gb|AAC27107.1| vanillate demethylase [Acinetobacter sp. ADP1]
Length = 358
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 139/348 (39%), Gaps = 60/348 (17%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENKVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG +GK MP+ ++ K+ E+ G IW+WPG++ + L
Sbjct: 63 HLVCGYHGLVMGCEGKTIAMPAQRVGGFPCNKAYAVVEKYGFIWVWPGEK--SLANEADL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 381
P + H E + + ++ L++DNL+DL H + H+S+ + + P
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ-----KEIDEALP 175
Query: 382 ASGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGIS 411
+ + G +W D P+D F P V +G++
Sbjct: 176 VTKVDGDHVVTERYMENIIAPPFWQMALRGNHLADDVPVDRWQRCHFFAPSNVHIEVGVA 235
Query: 412 KPGKLEGQNTRQCATHLHQLHVCL-PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 470
G G N + L L + + P + + M+ +F P Q L
Sbjct: 236 HAGH-GGYNAPKTRKSLQWLSIVVTPETETSHWYFWGMARNFQ------PENQQLTDQIR 288
Query: 471 E---QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 515
E ++ EDL ++ QQ+ + L + D GV+ R D L
Sbjct: 289 EGQGKIFTEDLEMLEQQQQNIVRNPQRQLLMLNIDAGGVQSRKIIDRL 336
>gi|414079743|ref|YP_007001167.1| pheophorbide a oxygenase [Anabaena sp. 90]
gi|413973022|gb|AFW97110.1| pheophorbide a oxygenase [Anabaena sp. 90]
Length = 469
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 140/313 (44%), Gaps = 41/313 (13%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVIFRGKDGIPGCVQ---------NTCAHR 255
G P + +L W+PV + DL P+ + GKD + Q + C HR
Sbjct: 19 GGSNPDSFQLAEAWYPVHYLQDLDKSKPTPFTLL-GKDIVIWWDQKNSSWQVFIDQCPHR 77
Query: 256 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--------IKSLPCFEQE 306
PL G +NE G ++CPYHGW ++ DG C+K+P Q+ K + SLP E++
Sbjct: 78 LAPLSEGRINEDGLLECPYHGWSFAGDGSCQKIPQ-QVAGGKAETSPRACVPSLPTTERQ 136
Query: 307 GMIWIWPGDEPPTAT---IPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 359
G+++++ G+ P A +P + P P G+ I ++P + LL+N+LD +H
Sbjct: 137 GLLFVYAGN-PENAINTKVPVVEPIESAPEGWVI-MNTFRDVPYDALTLLENILDPSHIA 194
Query: 360 FTHTSTFA-KGWSVPSLVKFLTPAS-GLQGYWDPYPIDMEFRP-PCMVLSTIGISKPGKL 416
FTH T + + P ++ + G +G W +P LST I+ PG L
Sbjct: 195 FTHHLTVGNRANAAPLELEIVESGKYGFEGIW-----KQGLKPGQSGKLSTTFIA-PG-L 247
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVL 474
+ + + +P + + R++ R F S + + + H + +
Sbjct: 248 MWHDINAEKGRILTVVYAVPIRKGECRIIARFPFKFKSQIPGFFIKIRPRWYVHIGQNGV 307
Query: 475 NEDLRLVLGQQER 487
ED ++ L QER
Sbjct: 308 LEDDQIFLHYQER 320
>gi|428772546|ref|YP_007164334.1| Pheophorbide a oxygenase [Cyanobacterium stanieri PCC 7202]
gi|428686825|gb|AFZ46685.1| Pheophorbide a oxygenase [Cyanobacterium stanieri PCC 7202]
Length = 465
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 125/315 (39%), Gaps = 56/315 (17%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMEPWVI--------FRGKDGIPGCVQNTCAHRACPLHLG 262
N + W+PV F DL+ + + + + K + C HR PL G
Sbjct: 24 NFNYQEVWYPVFFVEDLEKNRPNSFTLLEEDIVIWWEEKTSQWRVFTDKCPHRLAPLTEG 83
Query: 263 SVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRN-------VKIKSLPCFEQEGMIWIWPG 314
+NE G ++CPYHGW +S +G CE +P Q +++ PC ++ +++++ G
Sbjct: 84 RINEEGLLECPYHGWAFSGEGDCEVIPQQQENQRAHTSSRACVRAYPCKVEQDLLFVYAG 143
Query: 315 -----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
D+ P + L + ++P LL+N+LD +H P+TH +
Sbjct: 144 NPDNADKTPIPIVGPLEEDKDKWLVLNTFRDIPYSALTLLENVLDSSHIPYTHHGSVGDR 203
Query: 370 WSVPSLVKFLTPAS--GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 427
+V ++ + ++ G G W P + GKL Q T A +
Sbjct: 204 TNVSTVELEIISSNRQGFNGVWQEGP------------------RKGKLGSQYTTFVAPN 245
Query: 428 L--HQLH-----------VCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQ 472
L H L P S+ K RL R F+S + + + H +
Sbjct: 246 LMWHDLTSKQFGRTMTVVYATPISKGKCRLFARFPFQFSSKIPQFFIKLTPRWYSHLNQN 305
Query: 473 VLNEDLRLVLGQQER 487
+ ED ++ L QER
Sbjct: 306 AILEDDQIFLHYQER 320
>gi|425076775|ref|ZP_18479878.1| hypothetical protein HMPREF1305_02688 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425087408|ref|ZP_18490501.1| hypothetical protein HMPREF1307_02857 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405592484|gb|EKB65936.1| hypothetical protein HMPREF1305_02688 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405604132|gb|EKB77253.1| hypothetical protein HMPREF1307_02857 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 345
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA + D+ + E VI+R K + ++ C HR PL LG E
Sbjct: 21 RLARCWHPVARACDITGAPVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHEE 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEPP 318
I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + PP
Sbjct: 80 EGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPPP 139
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 376
T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 140 LPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDYT 198
Query: 377 KFLTPASGLQGYWDP---YPIDMEFRPP 401
TP + YW YP +FR P
Sbjct: 199 PHETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|423095041|ref|ZP_17082837.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
gi|397886188|gb|EJL02671.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
Length = 265
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ A+ +++K + EP V FR G + + C HR PL +G +
Sbjct: 4 LRNVWYAAAWGSEVKVGALFQRTLLNEPVVFFRDSHGAAQAIADRCPHRFAPLGMGVLKG 63
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDE--PPTAT 321
++CPYHG E+ G C P R K+K+ P E+ ++WIW GD
Sbjct: 64 DAVRCPYHGLEFDGSGSCVHYPHGDGAIPRAAKVKAYPLVERYSLLWIWMGDMSLADATL 123
Query: 322 IPCLLPPSGFEIH-AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
IP G + + + + L DN++DL+H F H ST
Sbjct: 124 IPDFSCMDGDHWYVGKRYLHAKANYVLETDNIMDLSHIEFLHPSTLG 170
>gi|399078123|ref|ZP_10752723.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398034061|gb|EJL27338.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 336
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 212 TRLKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
T + N W+P + +L+ + P +I+R G+ + + C HR P G++
Sbjct: 2 TYIYNAWYPAGWVHELEKGPIARKFLDIPVMIYRLSTGVLAALHDRCPHRFAPFSYGTIV 61
Query: 266 EGRIQCPYHGWEYSTDGKC--EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPP--TAT 321
E +++C YHG E+ + G+C + + K++S P FEQ+ ++WIW G+E P T+T
Sbjct: 62 EDKVRCIYHGLEFDSAGRCVGNALCFAAPKVAKVRSFPVFEQDNVVWIWMGEEEPADTST 121
Query: 322 IPCLL---PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
IP P ++ + ++ LL DNL+DL H H
Sbjct: 122 IPRYAYHNDPKYRCVYGNNYTKA--DYRLLCDNLMDLTHIVLLH 163
>gi|384421414|ref|YP_005630774.1| vanillate O-demethylase oxygenase subunit [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|353464327|gb|AEQ98606.1| vanillate O-demethylase oxygenase subunit [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 358
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 127/317 (40%), Gaps = 54/317 (17%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKICNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+T G+C MPS + N ++ P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQETINPSACVRRFPVAEKHRYVWIWPGDPAQADTRLIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 367
L G I+A+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWAHDPAWAGDGRTIYAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFD 183
Query: 368 -----KGWSVPSLVKFLTPAS----------GLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
+G +V + + P +G D + I + F P + +G++
Sbjct: 184 VVHGDRGVTVSRWMHNIDPPPFWAGQIARHLDYRGKVDRWQI-IHFEAPGTIAIDVGVAI 242
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
G + R + + L+ P + + ++A H + L R
Sbjct: 243 TGTGAPEGDRSQGVNGYVLNTVTPETDTTCHYFWAFMRNYA---LHDQSLTTLTREGVTG 299
Query: 473 VLNEDLRLVLGQQERMN 489
V ED ++ QQ ++
Sbjct: 300 VFGEDEAVLEAQQRAID 316
>gi|456357222|dbj|BAM91667.1| vanillate O-demethylase oxygenase, iron-sulfur subunit, vanA-like
protein [Agromonas oligotrophica S58]
Length = 347
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 129/334 (38%), Gaps = 54/334 (16%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++K + + V++R DG +++ C HR PL G + +
Sbjct: 8 NAWYAAAWDAEVKQALLPRTICGKHVVMYRKADGTVAALEDACWHRLVPLSKGRLEGDTV 67
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG +++ G+C MPS + N +++ P E+ IW+W GD P P +P
Sbjct: 68 VCGYHGLKFNPQGRCTFMPSQETINPSACVRAYPAVERHRFIWLWMGD--PALADPATIP 125
Query: 328 P-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------- 368
G IH ++ L++DNL+DL H F H S+
Sbjct: 126 DMHWNHDPAWAGDGKTIHVN------CDYRLVVDNLMDLTHETFVHGSSIGNEALTEAPF 179
Query: 369 ----GWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 415
G ++ + F G +G D + I + F PC V +G++ G
Sbjct: 180 DVTHGERTATVTRWMHGIEPPPFWARQLGKEGLVDRWQI-IRFEAPCTVTIDVGVAPTGT 238
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
+ R + L+ P + + + + ++ + + R +
Sbjct: 239 GAPEGDRSQGVNGMVLNTITPETERTCHYFWAFARNYQISEQR---LTTEIREGVSGIFR 295
Query: 476 EDLRLVLGQQERM--NNGANVWNLPVGYDKLGVR 507
ED ++ QQ M N G +NL + + R
Sbjct: 296 EDELILEAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|407773414|ref|ZP_11120715.1| vanillate monooxygenase [Thalassospira profundimaris WP0211]
gi|407283878|gb|EKF09406.1| vanillate monooxygenase [Thalassospira profundimaris WP0211]
Length = 338
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 139/329 (42%), Gaps = 38/329 (11%)
Query: 214 LKNFWFPVAFSTDL------KDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+NFW+ + ++ + E V++R D ++++C HR PL G V
Sbjct: 3 LRNFWYVAGWDGEIGRTPVARTICNENVVLYRRADRSLVALEDSCPHRLLPLSQGYVEGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPT--ATIP 323
R+ C YHG E+ DG C MP+ Q + + +++ P E++ +W+W GD+ A +P
Sbjct: 63 RLVCGYHGLEFDGDGACVHMPNQQSIHPEACVRAYPVVEKDRFVWVWIGDKEKADEALVP 122
Query: 324 CLLPPSGFE--IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 368
+P + E + ++ + LL+DNL+DL+H + H S+ +
Sbjct: 123 -DIPHASEEGWVFDGGTYDVKCGYELLVDNLMDLSHETYVHPSSIGQLEITESLPQTRSD 181
Query: 369 --GWSVPSLVKFLTP----ASGLQG--YWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 420
+V ++ + P A+ L+ D + I F P V+ +G++ G Q
Sbjct: 182 DESVTVERWMENIVPPPFWANNLKSKEVCDRWQI-CTFTLPSNVMIDVGVALAGTGAQQG 240
Query: 421 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 480
R ++ P + R + M +F + Q + + +V EDL +
Sbjct: 241 DRSKGVTGIVVNCMTPETETTCRYYWGMVRNFD--IDDNGLTQNI-KDAQAKVFYEDLEV 297
Query: 481 VLGQQERMNNGANVWNLPVGYDKLGVRYR 509
V GQQ M L D GVR R
Sbjct: 298 VEGQQANMLRHPERKLLNFNIDAGGVRAR 326
>gi|50084184|ref|YP_045694.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp. ADP1]
gi|49530160|emb|CAG67872.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
sp. ADP1]
Length = 358
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENKVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG +GK MP+ ++ K+ E+ G IW+WPG++ + L
Sbjct: 63 HLVCGYHGLVMGCEGKTIAMPAQRVGGFPCNKAYAVVEKYGFIWVWPGEK--SLANEADL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|21224238|ref|NP_630017.1| oxidase [Streptomyces coelicolor A3(2)]
gi|2815311|emb|CAA16434.1| putative oxidase [Streptomyces coelicolor A3(2)]
Length = 395
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 19/191 (9%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
+ N W+P+ + ++ +D + V++R DG C C H+ L G +
Sbjct: 2 IPNQWYPIVEAQEVGNDKPLGVRRMGQDLVLWRDIDGNLVCQGARCPHKGANLGDGRMKG 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPS--TQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
I+CPYHG+ Y DG C +P+ ++ R ++++ + P EQ G++W+W GDE PTA
Sbjct: 62 NTIECPYHGFRYGADGACRVIPAMGSEARIPGSLRVPTYPVREQFGLVWMWWGDERPTAD 121
Query: 322 IPCLLPPSGF----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 377
+P + P+ +++A P+ + +++LL+ H + H + + L+
Sbjct: 122 LPPVAAPAEVTDNRKLYATKRWTRPVHYTRYIESLLEFYHVTYVHRDHWFN--YIDYLLL 179
Query: 378 FLTPAS-GLQG 387
+ TP+ GL G
Sbjct: 180 YGTPSKFGLDG 190
>gi|340778645|ref|ZP_08698588.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
aceti NBRC 14818]
Length = 200
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIP-GCVQNTCAHRACPLHLGSVNEG 267
+FW+PVA+S +K +P VI R DG P +++ CAHR PL G+V+
Sbjct: 46 DFWYPVAWSKKVKSGKAFATRFAGDPIVIVRPDDGSPIYALEDRCAHRQVPLSKGTVDGD 105
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
++C YHGW + G C +P V +K+ PC E+ G+I+I+PGD T+P
Sbjct: 106 VVRCCYHGWSFDRKGSCVTVPYLNKPGVGRGVKTYPCQERSGLIFIFPGDPELAKTVPVP 165
Query: 326 LP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAH 357
+P P H + ++ + + +NL+D+ H
Sbjct: 166 VPCQADNPEFKTRHFDPLVNC--HYSFMHENLMDMNH 200
>gi|126661243|ref|ZP_01732316.1| oxidase-related protein [Cyanothece sp. CCY0110]
gi|126617472|gb|EAZ88268.1| oxidase-related protein [Cyanothece sp. CCY0110]
Length = 349
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 151/356 (42%), Gaps = 55/356 (15%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
T L+N W+ DLK M EP ++ R +DG +++ C HR PL G
Sbjct: 2 TTLLRNCWYVALPGKDLKPGKMVHKKMLGEPVLVGRHEDGEVFAMRDICPHRGIPLQYGW 61
Query: 264 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW---- 312
+ + C YHGW++S+ DG+C ++PS + +++ + PC E +G IW++
Sbjct: 62 IEGKDVCCCYHGWKFSSEDGRCREIPSLTEYDDLDISRIRVPTYPCREVQGNIWVYFAED 121
Query: 313 ------PGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 364
P PP TIP + P EI I I+H ++ L+D AH P+ H+S
Sbjct: 122 SKKELDPSTIPPVPTIPDFGKVSPGLSEI---IHFACHIDHAII--GLMDPAHGPYVHSS 176
Query: 365 TFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR-Q 423
+ + VK + ++P P+ P M +S ++P K+ G +
Sbjct: 177 WWWRSGPRKFRVK--------EKQYEPVPLGFRLVPYEMPVS----ARPYKILGNKVSIE 224
Query: 424 CATHLHQLHV-CLPSSRKKTRLLYRMS-------LDFASVLKHVPFM---QYLWRHFAEQ 472
L + L R LL ++ + F S+ +P+M + L +
Sbjct: 225 IVFELPSVRTEILRGDRYSACLLTTITPIDETECIAFQSIYWTIPWMGLFKPLLSLLTRK 284
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
L +D +V+ QQE + + + + +RL ++ + A+ PF P+
Sbjct: 285 FLAQDRDVVIQQQEGLVYDPPLMLIDDADTQAKWYFRLKQEYQKAQAENRPFKNPV 340
>gi|262197943|ref|YP_003269152.1| Rieske (2Fe-2S) domain-containing protein [Haliangium ochraceum DSM
14365]
gi|262081290|gb|ACY17259.1| Rieske (2Fe-2S) iron-sulphur domain protein [Haliangium ochraceum
DSM 14365]
Length = 367
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 214 LKNFWFPVAFSTDL-------KDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LKN+W+ + +L + E V++R DG + + C HR PL G + +
Sbjct: 25 LKNYWYVACLAEELGRKKPLARTIMEERLVLWRDADGRAVAMLDRCLHRNAPLSEGDLFD 84
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRN----VKIKSLPCFEQEGMIWIWPGDEPPTATI 322
G I CPYHGW Y DG C +PS ++I++ P E++G++W+W G +
Sbjct: 85 GCIGCPYHGWTYDRDGACVNVPSAGPEGAPVALRIETFPVRERDGLVWVWMGGDVAPERE 144
Query: 323 PCLLPPSGFEIHAEIVMELPIEHGL--LLDNLLDLAHAPFTHTSTF 366
P +P M ++ + L++N +D+ H F H F
Sbjct: 145 PFAMPFYDTPGWRRYYMVTAFDNDVTSLVENFMDVPHTVFVHRGWF 190
>gi|114570905|ref|YP_757585.1| Rieske (2Fe-2S) domain-containing protein [Maricaulis maris MCS10]
gi|114341367|gb|ABI66647.1| Rieske (2Fe-2S) domain protein [Maricaulis maris MCS10]
Length = 349
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 28/175 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 264
+K+ W+ A S++LK +P + R DG +++ C HR L G
Sbjct: 3 VKDLWYFGALSSELKPGQHLHRELLGQPVLFGRDHDGKAYALKDICPHRGILLSGGEAQN 62
Query: 265 --NEGRIQCPYHGWEYSTDGKCEKMPS--------TQLRNVKIKSLPCFEQEGMIWIWPG 314
E +++CPYHGW + TDG C +PS L ++++ P E +G+IWIW
Sbjct: 63 HDGETQVECPYHGWRFRTDGSCAAIPSLTADQAEAMDLTRIRVRRFPVHEDQGLIWIWYA 122
Query: 315 DEPPTATIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
DE T P + PP ++ + ++H ++ L+D AH P+ H
Sbjct: 123 DEDQADTAPSIDPPKLDIPEGHKPKLVVHDIFNCHVDHAVI--GLMDPAHIPYIH 175
>gi|311106169|ref|YP_003979022.1| rieske [2Fe-2S] domain-containing protein 5 [Achromobacter
xylosoxidans A8]
gi|310760858|gb|ADP16307.1| rieske [2Fe-2S] domain protein 5 [Achromobacter xylosoxidans A8]
Length = 356
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 131/336 (38%), Gaps = 50/336 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
+KN W+ A+ ++ + + P +++R G +++ C HR PL +G
Sbjct: 3 IKNTWYVAAWDQEVGANGLFSRTIIGVPVLMYRDAAGRLVALEDRCCHRGAPLSVGRREG 62
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
++C YHG ++ G C + P+ Q R ++++ P E+ IWIW GD P P
Sbjct: 63 DCVRCMYHGLKFDPTGACVEAPA-QARIPPQARVRTFPVVERHRWIWIWMGD--PERADP 119
Query: 324 CLLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--------- 369
L+P + + H + + + + L+ DNLLD +H PF H +T
Sbjct: 120 ALIPDTQWLDHPDWRSLDGYIHYDVNYLLIADNLLDFSHLPFVHPTTLGGSEDYAAVSPK 179
Query: 370 ------------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
W++ P + + GL W+ Y F P ++L G++
Sbjct: 180 VDRLPDGVRITRWTLNTEAPPFARKVREWPGLVDRWNIY----NFTLPGILLMDSGMAPA 235
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
G + R A P + T + +F+ P + +
Sbjct: 236 GNGAQEGNRAGAIEFRGCQALTPETATSTHYFFAHPHNFS---IDQPEVTASIHQSVVEA 292
Query: 474 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ED ++ QQ ++ + +P+ D ++R
Sbjct: 293 FDEDRDIITAQQRSLSLAPDFKMVPLSIDAALSQFR 328
>gi|427704111|ref|YP_007047333.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427347279|gb|AFY29992.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 361
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+ VA S + + +V+F +G+P + C HR L LG + EG
Sbjct: 20 QNCWYAVASSFAFRKGPVAVPFAGHDFVLFPDAEGLPRLFSDRCPHRGASLALGQLEEGG 79
Query: 269 -IQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
++CP+HGW+++ DG C + P S R+ + P E G IW+W G PP
Sbjct: 80 CLRCPFHGWKFAADGTCLEAPAEPAGASPPARSDLVGERPAVESRGFIWMWWGSGPPD-- 137
Query: 322 IPCLLP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P LLP P H E + + ++++ LD +HA + H TFA
Sbjct: 138 -PALLPDLPVFPDEAWGHVESSFDWETHYSRVIESNLDNSHAYWVHKGTFAS 188
>gi|388547303|ref|ZP_10150569.1| oxidoreductase subunit alpha [Pseudomonas sp. M47T1]
gi|388274547|gb|EIK94143.1| oxidoreductase subunit alpha [Pseudomonas sp. M47T1]
Length = 352
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 131/337 (38%), Gaps = 52/337 (15%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + + E V +RG G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAEKPLGRQICGEKIVFYRGPHGRVAAVEDFCPHRGAPLSLGYVESGN 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK +MP ++R K+ E+ G IW+WPG++ P L+
Sbjct: 64 LVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTYAVEERYGFIWVWPGEQ--KIADPELIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + E + + ++ L++DNL+DL H + H ++ + + P
Sbjct: 122 HLEWAVSDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHATSIGQ-----KEIDEAAPI 176
Query: 383 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 412
+ +Q +W D P+D F PP VL +G++
Sbjct: 177 TRVQDDEVITARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFSPPSHVLIEVGVAH 236
Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
GK Q + P + + M+ +F H + R +
Sbjct: 237 AGKGGYNAAPQYKAASIVVDFITPETDTSIWYFWGMARNFNP---HDETLTASIREGQGK 293
Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 294 IFSEDLTMLEQQQKNLLANPERNLLKLNIDAGGVQSR 330
>gi|449061481|ref|ZP_21738899.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
hvKP1]
gi|448873003|gb|EMB08127.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
hvKP1]
Length = 345
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA + D+ + E VI+R K + ++ C HR PL LG E
Sbjct: 21 RLARCWHPVARACDIAGAPVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHEE 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEPP 318
I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + PP
Sbjct: 80 EGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPPP 139
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 376
T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 140 LPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADSDNQQVPDYT 198
Query: 377 KFLTPASGLQGYWDP---YPIDMEFRPP 401
TP + YW YP +FR P
Sbjct: 199 PQETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|357032542|ref|ZP_09094477.1| putative ferredoxin subunit of ring-hydroxylating dioxygenase
[Gluconobacter morbifer G707]
gi|356413533|gb|EHH67185.1| putative ferredoxin subunit of ring-hydroxylating dioxygenase
[Gluconobacter morbifer G707]
Length = 373
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 15/160 (9%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+P+A+S D+K P + R ++G +++ CAHR PL LG V+
Sbjct: 24 DYWYPIAWSKDVKRGKTVGRRFGKHPIALVRPEEGSVFALEDRCAHRQVPLSLGKVSGEA 83
Query: 269 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGD--EPPTATIP 323
+QC YHGW Y G+C +P +L N +K+ PC E GMI+I+PGD + T +P
Sbjct: 84 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVKTYPCREVGGMIFIFPGDAEKAETTPLP 142
Query: 324 CLLPPSGFEIHAEIVM-ELPIEHGLLLDNLLDLAHAPFTH 362
L S + ++ + L +NL+D+ H F H
Sbjct: 143 KLAQVSNPAFKTRLFSPQVKCHYTFLHENLMDMNHQ-FLH 181
>gi|49176900|ref|YP_025403.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
eutropha JMP134]
gi|72384285|ref|YP_293638.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
gi|39777480|gb|AAR31055.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
eutropha JMP134]
gi|72123638|gb|AAZ65781.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
Length = 358
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 19/167 (11%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KNFW+ A ++ + +P V FR DG + + C+HR L LG +
Sbjct: 4 KNFWYVGAMKHEVGRQLLARTLLEQPVVFFRRNDGSVAALADRCSHRRVSLSLGRLIGDE 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QC YHG ++ DG C +P Q R + ++S P E++G +WIWPGD P L
Sbjct: 64 VQCGYHGLTFAGDGSCTSIPG-QSRVPPSACVRSYPVVERDGFVWIWPGD--PALANETL 120
Query: 326 LPPSGFEIHAEIVMELPIEHGLL-------LDNLLDLAHAPFTHTST 365
+P + + P E L+ ++N+LDL+H + H T
Sbjct: 121 VPDYAEICSSGRYVGRPAEALLVEAPFLFNIENVLDLSHVTYAHPET 167
>gi|384221115|ref|YP_005612281.1| vanillate O-demethylase oxygenase subunit [Bradyrhizobium japonicum
USDA 6]
gi|354960014|dbj|BAL12693.1| vanillate O-demethylase oxygenase subunit [Bradyrhizobium japonicum
USDA 6]
Length = 349
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 44/287 (15%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN- 294
V++R DG +++ C HR PL G + + C YHG +Y+ G+C MPS + N
Sbjct: 34 VMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGRCTFMPSQETINP 93
Query: 295 -VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP-----------SGFEIHAEIVMELP 342
+++ P E+ +W+W GD P P L+P G IH
Sbjct: 94 SACVRAYPVVERHRYVWLWMGD--PALADPALVPDMHWNHDPAWAGDGKTIHVN------ 145
Query: 343 IEHGLLLDNLLDLAHAPFTHTSTFAKG------WSVPSLVKFLTPASGLQG-----YW-- 389
++ L+LDNL+DL H F H S+ + V K +T ++G +W
Sbjct: 146 CDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHGEKTVTVTRWMRGIEAPPFWAK 205
Query: 390 ---DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKT 442
P +D + F PC + +G++ G + R + L+ P + K
Sbjct: 206 QLGKPGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGDRSQGVNGFVLNTITPETEKTC 265
Query: 443 RLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 489
+ ++ + + R + +ED ++ QQ M+
Sbjct: 266 HYFWAFVRNYQIGEQRITTEI---REGVSGIFHEDELILEAQQRAMD 309
>gi|257056591|ref|YP_003134423.1| vanillate demethylase subunit A [Saccharomonospora viridis DSM
43017]
gi|256586463|gb|ACU97596.1| vanillate demethylase subunit A [Saccharomonospora viridis DSM
43017]
Length = 377
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 128/324 (39%), Gaps = 64/324 (19%)
Query: 215 KNFWFPVAFSTDLKDD-------TMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+N W+ A+ ++ D P ++R +G + + C HR PL G +
Sbjct: 26 RNAWYVAAWDYEVTDKKPLARTVAGVPLALWRNTEGRAVALADACWHRLAPLSKGKIIGD 85
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QCPYHG +++ G+C MP+ + N + S P E+ +W+W GD P P
Sbjct: 86 ELQCPYHGLRFNSAGRCTAMPAQETLNPSALVPSYPVVERYRYVWVWVGD--PNLADPNT 143
Query: 326 LPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------ 368
+P G IHA+ + L+LDNL+DL H F H+S+ +
Sbjct: 144 VPDMHQMDDPAWAGDGETIHAD------CNYQLVLDNLMDLTHEEFVHSSSIGQEELSEA 197
Query: 369 -------GWSVPS---LVKFLTPASGLQGYWDPYP-----ID----MEFRPPCMVLSTIG 409
G +V ++ P L+ D +P +D ++F P + +G
Sbjct: 198 DFDVVHEGNTVTVTRWMLNVDAPPFWLRNMRDKFPGFEGKVDRWQIIKFEAPSTIRIDVG 257
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY----RMSLDFASVLKHVPFMQYL 465
++K G + R + + ++ P + + + LD ++ +
Sbjct: 258 VAKAGTGAPEGDRSQGVNGYVMNTITPETDRSCHYFWAFMRNYRLDSQTITTRL------ 311
Query: 466 WRHFAEQVLNEDLRLVLGQQERMN 489
R V ED ++ QQ ++
Sbjct: 312 -RQSVSGVFAEDEDMLRAQQRAID 334
>gi|126731895|ref|ZP_01747699.1| Rieske (2Fe-2S) protein [Sagittula stellata E-37]
gi|126707722|gb|EBA06784.1| Rieske (2Fe-2S) protein [Sagittula stellata E-37]
Length = 356
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 103/255 (40%), Gaps = 32/255 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ A+ST++ DD + V++R DG +++ C HR PL G
Sbjct: 5 IRNAWYVAAWSTEIDDDLRRFTILGDHVVMYRKSDGGVVALEDRCPHRLLPLSKGKRVGD 64
Query: 268 RIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QC YHG + G C ++P T L ++ +++ P E+ G++WIW GD T
Sbjct: 65 NVQCGYHGLTFDCSGACVRVPGQTNLPKSAYVEAFPTEERHGIVWIWMGDAARADTSKIF 124
Query: 326 LPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 381
P G+++H + L + + +NL+D AH F H +T S V T
Sbjct: 125 DMPEFTDPGWKVHHGDALHLRSNYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVQTE 184
Query: 382 ASGLQGY-W--DPYPIDME-----------------FRPPCMVLSTIGISKPGKLEGQNT 421
+ + W D PI PC + G + + ++
Sbjct: 185 GEAIVAWRWIRDAEPIGFFKGFGGFTGNVDRWHYYYLYTPCTAVIDFGSAPAEEAIAEDE 244
Query: 422 RQCATHLHQLHVCLP 436
R + LH P
Sbjct: 245 RDKGVRIFALHFITP 259
>gi|58040226|ref|YP_192190.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter oxydans
621H]
gi|58002640|gb|AAW61534.1| Bacterial ring hydroxylating dioxygenases alpha subunit
[Gluconobacter oxydans 621H]
Length = 390
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 26/184 (14%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+PVA+S +LK +P + R DG +++ CAHR PL LG V+
Sbjct: 51 DYWYPVAWSRELKRGKTIGTRYAGQPIALVRPMDGSVFALEDRCAHRQVPLSLGKVSGEA 110
Query: 269 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD + P
Sbjct: 111 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPCREEGGLIFIFPGDPAKAESTP-- 167
Query: 326 LPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTHTST-------FAKGWSVP 373
P G + E + + + +NL+D+ H F H F G P
Sbjct: 168 FPQLGSVGNPEYKTRRFGETVACHYSFMHENLMDMNHQ-FMHMKQMGQMKPRFLGGRDEP 226
Query: 374 SLVK 377
+LV+
Sbjct: 227 TLVE 230
>gi|357394269|ref|YP_004909110.1| putative vanillate O-demethylase oxygenase subunit [Kitasatospora
setae KM-6054]
gi|311900746|dbj|BAJ33154.1| putative vanillate O-demethylase oxygenase subunit [Kitasatospora
setae KM-6054]
Length = 342
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 22/165 (13%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+N W+ A++ ++ DD + EP V++R +DG + + C HR PL
Sbjct: 6 RNQWYVAAYAAEVGDDLLGRTVLGEPVVLYRSAEDGRAIALADRCVHRRFPLSESRREGD 65
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTAT---- 321
I C YHG+ Y G C +P R ++ + P EQ+ ++WIW GD P A
Sbjct: 66 AIICGYHGFTYDRTGACVSVPGQTRVPRTARVAAYPVVEQDSLVWIWIGD--PAAADASR 123
Query: 322 ---IPCLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH 362
P L P+ + ME + ++GLL+DNLLDL+H + H
Sbjct: 124 VPRAPHLADPAMTTVRG---MEPIDADYGLLVDNLLDLSHETYLH 165
>gi|398849503|ref|ZP_10606240.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
gi|398250755|gb|EJN36056.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
Length = 370
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 18/189 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ + S+ L + + +V FR G + + C HR L G+
Sbjct: 2 LKNLWYVILPSSQLSQEIAPIRLLGQSFVAFRDSHGKARLLSDICVHRGGSLSAGAKVGD 61
Query: 268 RIQCPYHGWEYSTDGKCEKMPST-QLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
+QCPYHGW + DG+C ++P+ LR ++ + P E+ G IW + GD P P
Sbjct: 62 SVQCPYHGWRFDGDGRCVQIPAQPTLRIPEKARVDAYPTEERYGWIWAFLGDLPEAERPP 121
Query: 324 CLLPPSGFEIHAEIVM-----ELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 378
LP + A + + + +++N LD AHAPF H STF + P + F
Sbjct: 122 --LPALDWLDDANVRVVSGHFDWEASWDRVIENGLDFAHAPFVHGSTFGDP-AHPEIEAF 178
Query: 379 LTPASGLQG 387
+ QG
Sbjct: 179 DVDSDAWQG 187
>gi|295699780|ref|YP_003607673.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295438993|gb|ADG18162.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 354
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 131/342 (38%), Gaps = 62/342 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
++N W+ A+S ++ DD + P +++R DG +Q+ C HR PL +G
Sbjct: 3 IRNTWYVAAWSHEVTDDALFSRTIIGTPVLLYRTTDGQLVALQDRCCHRGAPLSVGRREG 62
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
++C YHG ++ G C + P+ Q R ++S P E+ IWIW GD P P
Sbjct: 63 DCVRCLYHGLKFDARGTCVEAPA-QPRIPPKATVRSYPVVERHRWIWIWMGD--PMLADP 119
Query: 324 CLLPPSGF-----------EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA----- 367
+P + + IH + + + L+ DNLLD +H PF H T
Sbjct: 120 ATIPDTHWLDDPAWRCLPGYIHYD------VNYLLICDNLLDFSHLPFVHPGTLGGPETY 173
Query: 368 ----------------KGWSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLST 407
W++ PS + G W+ Y +F P ++L
Sbjct: 174 ADVRPTVERLDNGVRISRWTMDTQAPSFAAAVKHWPGNVDRWNLY----DFTIPGILLMD 229
Query: 408 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 467
G++ G + R A P + T + +FA ++ Q +
Sbjct: 230 SGMAPVGTGAREGKRVDAAEFRSCQALTPETETSTHYFFAQPHNFA--IEQPEVTQSIHE 287
Query: 468 HFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
E ED ++ Q+ ++ + + G D ++R
Sbjct: 288 AIVE-AFAEDRAIITAQRRNLSLDPDFKMMAFGIDSALSQFR 328
>gi|220919762|ref|YP_002495065.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
nodulans ORS 2060]
gi|219952182|gb|ACL62573.1| Rieske (2Fe-2S) domain protein [Methylobacterium nodulans ORS 2060]
Length = 448
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 17/177 (9%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTC 252
+ SGP P T ++ +W P A +L+ + E +V+FR + G G + C
Sbjct: 10 ITRSGPGTPLGTLMRRYWQPAALVDELQGERPVVPVQLLGEKFVLFRDEAGRYGLLDRDC 69
Query: 253 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEG 307
HR L G + G ++C +HGW + +G+C + P+ + RN++ ++ P E+ G
Sbjct: 70 PHRGADLAFGRLEHGGLRCAFHGWLFDVEGRCLETPAEPVGSKLCRNIRQRAYPVVERSG 129
Query: 308 MIWIWPGD-EPPT-ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
+++ + G+ EPP + C L P+ + + + E L + +D AHA F H
Sbjct: 130 ILFAYLGEGEPPAFPELDCFLAPNAYTFAFKGLFECNWLQALEVG--IDPAHASFLH 184
>gi|421849881|ref|ZP_16282853.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus NBRC 101655]
gi|421853347|ref|ZP_16286023.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371459301|dbj|GAB28056.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus NBRC 101655]
gi|371478455|dbj|GAB31226.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 372
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 27/208 (12%)
Query: 176 DQTCASPSTSKQ-SLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-- 232
DQT + S++++ +++ KGK+ + + S P ++W+PVA+S +LK
Sbjct: 2 DQTAQTDSSTQELAVEARKGKIDLRRVR-SNP---------DYWYPVAWSRELKPGKTIG 51
Query: 233 -----EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM 287
P + R G +++ CAHR PL G+V ++C YHGW Y G+C +
Sbjct: 52 TRYAGTPIALVRPDAGPVFALEDRCAHRQVPLSKGTVEGASVKCCYHGWAYGRSGRCIDV 111
Query: 288 P---STQLRNVKIKSLPCFEQEGMIWIWPGD--EPPTATIPCLLPPSGFEIHAEIVMELP 342
P +L N +++ PC EQ+GMI+++PGD + T +P L + +
Sbjct: 112 PYLGKGKLPN-GVRTFPCREQDGMIFVFPGDPEKADTVPLPAHLARASNPAYKTRYFGTT 170
Query: 343 I--EHGLLLDNLLDLAHAPFTHTSTFAK 368
I + + +NL+D+ H F H+ +
Sbjct: 171 IGCHYSFMHENLMDMNHQ-FMHSKQMGQ 197
>gi|365141332|ref|ZP_09347136.1| hypothetical protein HMPREF1024_03167 [Klebsiella sp. 4_1_44FAA]
gi|419974429|ref|ZP_14489848.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|419979949|ref|ZP_14495237.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|419985376|ref|ZP_14500517.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|419991036|ref|ZP_14506004.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|419997165|ref|ZP_14511963.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|420003374|ref|ZP_14518020.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|420009022|ref|ZP_14523508.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|420015354|ref|ZP_14529655.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|420020652|ref|ZP_14534838.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|420026028|ref|ZP_14540033.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|420032105|ref|ZP_14545922.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|420037639|ref|ZP_14551292.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|420043536|ref|ZP_14557023.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|420049252|ref|ZP_14562561.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|420054838|ref|ZP_14568009.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|420061104|ref|ZP_14574096.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|420066770|ref|ZP_14579568.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|420071265|ref|ZP_14583912.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|420077309|ref|ZP_14589775.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|420081737|ref|ZP_14594042.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|421912736|ref|ZP_16342447.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421913900|ref|ZP_16343562.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|425081472|ref|ZP_18484569.1| hypothetical protein HMPREF1306_02220 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425091489|ref|ZP_18494574.1| hypothetical protein HMPREF1308_01749 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428149802|ref|ZP_18997614.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428932476|ref|ZP_19006053.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
JHCK1]
gi|428940702|ref|ZP_19013776.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
VA360]
gi|194399727|gb|ACF60811.1| HpxD [Klebsiella pneumoniae]
gi|363652905|gb|EHL91907.1| hypothetical protein HMPREF1024_03167 [Klebsiella sp. 4_1_44FAA]
gi|397345856|gb|EJJ38976.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|397347459|gb|EJJ40566.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|397351770|gb|EJJ44852.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|397363434|gb|EJJ56074.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|397364959|gb|EJJ57586.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|397369742|gb|EJJ62341.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|397376596|gb|EJJ68849.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|397382477|gb|EJJ74638.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|397387647|gb|EJJ79662.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|397396089|gb|EJJ87784.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|397398428|gb|EJJ90091.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|397405204|gb|EJJ96675.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|397413644|gb|EJK04856.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|397413832|gb|EJK05038.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|397422433|gb|EJK13402.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|397429250|gb|EJK19969.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|397431598|gb|EJK22270.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|397440589|gb|EJK30991.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|397446191|gb|EJK36414.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|397452878|gb|EJK42943.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|405602902|gb|EKB76025.1| hypothetical protein HMPREF1306_02220 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405612548|gb|EKB85299.1| hypothetical protein HMPREF1308_01749 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|410113356|emb|CCM85072.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410123734|emb|CCM86187.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|426301783|gb|EKV64010.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
VA360]
gi|426307088|gb|EKV69177.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
JHCK1]
gi|427540228|emb|CCM93752.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
Length = 345
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA + D+ + E VI+R K + ++ C HR PL LG E
Sbjct: 21 RLARCWHPVARACDIAGAPVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHEE 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEPP 318
I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + PP
Sbjct: 80 EGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPPP 139
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 376
T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 140 LPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDYT 198
Query: 377 KFLTPASGLQGYWDP---YPIDMEFRPP 401
TP + YW YP +FR P
Sbjct: 199 PQETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|330006269|ref|ZP_08305574.1| rieske [2Fe-2S] domain protein [Klebsiella sp. MS 92-3]
gi|328535920|gb|EGF62345.1| rieske [2Fe-2S] domain protein [Klebsiella sp. MS 92-3]
Length = 345
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA + D+ + E VI+R K + ++ C HR PL LG E
Sbjct: 21 RLARCWHPVARACDITGAPVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHEE 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEPP 318
I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + PP
Sbjct: 80 EGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPPP 139
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 376
T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 140 LPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDYT 198
Query: 377 KFLTPASGLQGYWDP---YPIDMEFRPP 401
TP + YW YP +FR P
Sbjct: 199 PQETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|289661877|ref|ZP_06483458.1| putative vanillate O-demethylase oxygenase subunit [Xanthomonas
campestris pv. vasculorum NCPPB 702]
gi|289669971|ref|ZP_06491046.1| putative vanillate O-demethylase oxygenase subunit [Xanthomonas
campestris pv. musacearum NCPPB 4381]
Length = 350
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 135/334 (40%), Gaps = 55/334 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVN 265
RL W VA S+++ + EP V++R G + + ++ C HR PL +G+ +
Sbjct: 21 RLAQHWHAVALSSEVSEAPFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMGTAD 78
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 321
G + C YHG + + G+C +P++ +N+ ++ + E+ G+IW+ +
Sbjct: 79 GGGVVCAYHGLRFGSGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAGVSD 138
Query: 322 IPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWSVP 373
+PP GF+ ++ L+ +D+AH F HT+TFA+ VP
Sbjct: 139 AEIQIPPMPGWDEEGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKREVP 198
Query: 374 SLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKPGK 415
+ TP Y Y +DM E P TI PGK
Sbjct: 199 AYTTTETPTGFNADYLSTVANYSVDMPLPEVAPDFQWLRHFEVHLPFTATLTIHFPVPGK 258
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
L ++ P S+ KTRLL ++ +F + H+P F +V
Sbjct: 259 -----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLRVFE 302
Query: 476 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
ED +V Q+ + + + D+ + YR
Sbjct: 303 EDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|148555200|ref|YP_001262782.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148500390|gb|ABQ68644.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 367
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ A+S ++ D+ + E +++R + G NTC HR PLHLG V
Sbjct: 4 LRNAWYVAAWSDEVSDNLLTRRILNEQVLLYRTEAGELVATANTCPHRFAPLHLGKVVGD 63
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGD--EPPTATI 322
I+CPYHG ++ +G+C P R ++++ P E+ G WIW GD A I
Sbjct: 64 AIECPYHGLRFNGEGRCVFNPDGDGRIPAGARLRTYPITERLGAAWIWMGDPARADLAMI 123
Query: 323 P---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P L PS + V+ + + + DNL+D AH H ++ A
Sbjct: 124 PDFEFLEDPSYRTVKG--VLHVRANYRYINDNLMDEAHLHMVHHNSLA 169
>gi|238894701|ref|YP_002919435.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|402780814|ref|YP_006636360.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|238547017|dbj|BAH63368.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|402541717|gb|AFQ65866.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae 1084]
Length = 345
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA + D+ + E VI+R K + ++ C HR PL LG E
Sbjct: 21 RLARCWHPVARACDIAGAPVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHEE 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEPP 318
I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + PP
Sbjct: 80 EGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPPP 139
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 376
T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 140 LPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDYT 198
Query: 377 KFLTPASGLQGYWDP---YPIDMEFRPP 401
TP + YW YP +FR P
Sbjct: 199 PQETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|384921320|ref|ZP_10021304.1| vanillate O-demethylase oxygenase, putative [Citreicella sp. 357]
gi|384464805|gb|EIE49366.1| vanillate O-demethylase oxygenase, putative [Citreicella sp. 357]
Length = 356
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ A+ST++ D+ + V+FR DG +++ C HR PL G
Sbjct: 5 VRNAWYVAAWSTEIDDELRRFTILGDHVVMFRKTDGTVAALEDRCPHRLLPLSRGKRVGD 64
Query: 268 RIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPGD----EPPTA- 320
+QC YHG + G C ++P T L ++ ++ + P E G++WIW GD +P T
Sbjct: 65 TVQCGYHGLTFDCSGACVRVPGQTNLPKSARVDAFPIVENHGIVWIWMGDPTRADPETVF 124
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 371
+P P+ + +H + L + + +NL+D AH F H +T S
Sbjct: 125 DMPEFSDPN-WAVHHGDALHLESHYLNVAENLVDPAHVSFVHPTTLGNAAS 174
>gi|220926846|ref|YP_002502148.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
nodulans ORS 2060]
gi|219951453|gb|ACL61845.1| Rieske (2Fe-2S) domain protein [Methylobacterium nodulans ORS 2060]
Length = 361
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 113/272 (41%), Gaps = 38/272 (13%)
Query: 216 NFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ VA+ ++K + V++R DG +++ C HR PL LG ++ +
Sbjct: 10 NAWYAVAWDHEIKRELTARTICDTGIVLYRRTDGQVAALEDACWHRLLPLSLGHLHGDEV 69
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG ++ G+C MP+ + N +++ P E+ +IW+W GD P P +P
Sbjct: 70 VCGYHGLIFNPAGRCTFMPAQETINPSACVRAFPVVERYRLIWVWMGD--PALADPDTVP 127
Query: 328 PSGFEIHAEIVME------LPIEHGLLLDNLLDLAHAPFTHTSTFA-------------- 367
+ A V E L ++ L++DNL+DL H + H +
Sbjct: 128 DFHWNSDAPWVGEGGTFYSLQCDYRLVIDNLMDLTHETYVHAGSIGDEAITRNPFEVTHT 187
Query: 368 -KGWSVPSLVKFLTPAS------GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 420
+ +V ++ + P G G+ D + I + F PC+V +G++ G Q
Sbjct: 188 DRKVTVERWMENIEPPPFWARLLGRPGHVDRWQI-IHFEAPCVVAGDVGVALTGTGARQG 246
Query: 421 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 452
R + L P + + +F
Sbjct: 247 DRSQGVNGFFLAAITPETGTSCHYFWNFVRNF 278
>gi|399077235|ref|ZP_10752329.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398035712|gb|EJL28944.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 371
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 80/180 (44%), Gaps = 43/180 (23%)
Query: 216 NFWFPVAFSTDLKDDTME-------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN--- 265
+ W+ S DLK ME P +I R K G +++ C HRA L G
Sbjct: 28 DAWYMACLSPDLKPGKMESREFLGEPVLIGRTKAGAVYALRDVCPHRAANLSAGKTRTEA 87
Query: 266 EGR--IQCPYHGWEYSTDGKCEKMPSTQLRN------VKIKSLPCFEQEGMIWIWPGDEP 317
+GR ++CPYHGW + TDG C K+PS N V+++ P E +G++WIW +P
Sbjct: 88 DGRETVECPYHGWRFHTDGGCAKIPSLTADNPLDISKVRVRKYPLVESQGLVWIWMSGDP 147
Query: 318 ---------------PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
P L+ ++IH I+H +L L+D AH PF H
Sbjct: 148 RFDGQPPAPPPVIPGVVGGKPKLVDRLDYDIH--------IDHAVL--GLIDPAHGPFVH 197
>gi|172039308|ref|YP_001805809.1| putative Rieske 2Fe-2S family protein [Cyanothece sp. ATCC 51142]
gi|354552425|ref|ZP_08971733.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. ATCC
51472]
gi|171700762|gb|ACB53743.1| putative rieske 2Fe-2S family protein [Cyanothece sp. ATCC 51142]
gi|353555747|gb|EHC25135.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. ATCC
51472]
Length = 349
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 148/354 (41%), Gaps = 51/354 (14%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
T L+N W+ DLK M EP ++ R +DG ++N C HR PL G
Sbjct: 2 TTLLRNCWYVALPGKDLKPGKMVHKKMLGEPVLVGRHEDGEVFAMRNICPHRGIPLQYGW 61
Query: 264 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW---- 312
+ + C YHGW++S+ DG C ++PS + +++ + PC E +G IW++
Sbjct: 62 MEGKDVCCCYHGWKFSSEDGHCREIPSLTEYDDLDISRIRVPTYPCREVQGNIWVYFAED 121
Query: 313 ------PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
P PP TIP S I I I+H ++ L+D AH P+ H+S +
Sbjct: 122 SKKELDPTTIPPVPTIPDFGKVSP-GISETIDFACHIDHAII--GLMDPAHGPYVHSSWW 178
Query: 367 AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR-QCA 425
+ VK + ++P P+ P M +S ++P K+ G +
Sbjct: 179 WRSGPRKFRVK--------EKQYEPVPLGFRLVPYEMPVS----ARPYKILGNKVSIEIV 226
Query: 426 THLHQLHV-CLPSSRKKTRLLYRMS-------LDFASVLKHVPFM---QYLWRHFAEQVL 474
L + L R LL ++ + F S+ +P+M + L + L
Sbjct: 227 FELPSVRTEILRGDRYSACLLTTITPIDETQCIAFQSIYWTIPWMGLFKPLLSLLTRKFL 286
Query: 475 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
+D +V+ QQE + + + + +RL ++ + A+ PF P+
Sbjct: 287 AQDRDVVIQQQEGLAYDPPLMLIDDADTQAKWYFRLKQEYQKAQAENRPFQNPV 340
>gi|415942530|ref|ZP_11555927.1| Putative ferridoxin oxidoreductase subunit [Herbaspirillum
frisingense GSF30]
gi|407758833|gb|EKF68603.1| Putative ferridoxin oxidoreductase subunit [Herbaspirillum
frisingense GSF30]
Length = 388
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 150/364 (41%), Gaps = 46/364 (12%)
Query: 183 STSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTD-----LKDDTMEPWVI 237
S ++ S DI++G S ++ P+ + N W+ AFS + LK + VI
Sbjct: 4 SMTQPSHDIIRGAQVAMS-RLADRNTPF---IFNEWYVAAFSDEVGRFLLKRTLLGKRVI 59
Query: 238 -FRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RN 294
+R + G P + + C HR+ PL G ++ + C YHG Y G C + P+ +N
Sbjct: 60 LYRTEAGNPVVMDDRCVHRSYPLSAGQLDGDTVVCGYHGLRYDASGDCIEAPAVAKCPKN 119
Query: 295 VKIKSLPCFEQEGMIWIWPG-----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLL 349
+ +++ P E+ +IWIW G DE +P ++ A+ +L + L
Sbjct: 120 IGVRTYPLAERGPVIWIWMGDPALADESKVPALPWMMDSEW--AGAKGYYDLKSSYVYLH 177
Query: 350 DNLLDLAHAPFTHTSTFAK------------GWSVPSLVKFLTPA---------SGLQGY 388
+NLLD +H + H +T G +LV+ ++P +GL G
Sbjct: 178 ENLLDTSHLSYMHANTIGSPDYVKAPTKSEMGEGRFALVRTVSPTKLPPVWGKPTGLDGV 237
Query: 389 WDPYPI-DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYR 447
I EF P + T + EG+ + H+ P++ T
Sbjct: 238 PTASRIVRNEFLTPALYEVTTRLYDSALAEGERPEFL---IKVAHMATPATHNTTHYFIY 294
Query: 448 MSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVR 507
+ DFA + Q++ +F + + + L L ++ G +++ + + D LGV
Sbjct: 295 LGRDFAQTDEAA--TQFMATNFFKAFDEDVVGLSLLEEVIAEQGDDLYEISIASDALGVA 352
Query: 508 YRLW 511
R +
Sbjct: 353 MRRY 356
>gi|206575963|ref|YP_002238543.1| Rieske 2Fe-2S domain-containing protein [Klebsiella pneumoniae 342]
gi|288935529|ref|YP_003439588.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Klebsiella
variicola At-22]
gi|290509567|ref|ZP_06548938.1| vanillate monooxygenase [Klebsiella sp. 1_1_55]
gi|378978754|ref|YP_005226895.1| Rieske (2Fe-2S) domain-containing protein [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|419763175|ref|ZP_14289419.1| Rieske (2Fe-2S) iron-sulfur domain protein [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
gi|206565021|gb|ACI06797.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae 342]
gi|288890238|gb|ADC58556.1| Rieske (2Fe-2S) iron-sulphur domain protein [Klebsiella variicola
At-22]
gi|289778961|gb|EFD86958.1| vanillate monooxygenase [Klebsiella sp. 1_1_55]
gi|364518165|gb|AEW61293.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397743860|gb|EJK91074.1| Rieske (2Fe-2S) iron-sulfur domain protein [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
Length = 345
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA + D+ + E VI+R K + ++ C HR PL LG E
Sbjct: 21 RLARCWHPVARACDITGAPVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHEE 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEPP 318
I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + PP
Sbjct: 80 EGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPPP 139
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 376
T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 140 LPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDYT 198
Query: 377 KFLTPASGLQGYWDP---YPIDMEFRPP 401
TP + YW YP +FR P
Sbjct: 199 PQETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|333907699|ref|YP_004481285.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
gi|333477705|gb|AEF54366.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
Length = 344
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ +S DL D + EP VI+RG+DG +++ C HR PL G V
Sbjct: 4 LRNTWYCAGWSQDLLDKPLAITLLNEPVVIYRGEDGTAIALEDRCPHRFAPLSKGKVQGN 63
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEP---PTAT 321
I C YHG + G P + +K P E +G+IWIW G+ P +
Sbjct: 64 NIACGYHGLVFDAKGNGTYNPHGNGAIPKGCSVKYYPVIEAQGVIWIWMGEASQADPASI 123
Query: 322 I---PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 363
I C +H + ++ E L+ DNLLDL+H P+ H+
Sbjct: 124 IDIGECDKREGWTSVHGYLNVKCHYE--LVADNLLDLSHVPYLHS 166
>gi|186472930|ref|YP_001860272.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia phymatum
STM815]
gi|184195262|gb|ACC73226.1| Rieske (2Fe-2S) domain protein [Burkholderia phymatum STM815]
Length = 374
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 17/167 (10%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+ W+P+A+S ++K EP V+ R + G +++ CAHR PL G V+
Sbjct: 31 DHWYPLAWSREVKRGKTHAVRFAGEPIVLARTESGKVIALEDRCAHRQVPLSGGVVDGEA 90
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
I+C YHGW Y GKC +P + +++ PC E EG+I+++PG T P L
Sbjct: 91 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRAYPCCESEGLIFVFPGKAELAETTP--L 148
Query: 327 PPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
PP G + E+ + + +NL+D+ H F H K
Sbjct: 149 PPLGSVANKAYKTRRFGREVACHYSFMHENLMDMNHQ-FLHRKQMGK 194
>gi|325914417|ref|ZP_08176764.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
vesicatoria ATCC 35937]
gi|325539425|gb|EGD11074.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
vesicatoria ATCC 35937]
Length = 350
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 134/334 (40%), Gaps = 55/334 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVN 265
RL W VA S+++ EP V++R G++ + ++ C HR PL +G+ +
Sbjct: 21 RLAQHWHAVALSSEVGQAPFKATLLDEPLVLYRLGEELV--AARDVCPHRGVPLSMGTAD 78
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 321
G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+ +
Sbjct: 79 GGGVVCAYHGLRFGAGGRCNHIPASPTQNIPAKMRLHTYAVAERYGLIWVCLAKPADVSE 138
Query: 322 IPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWSVP 373
+PP GF+ ++ L+ +D+AH F HT+TFA+ VP
Sbjct: 139 AEVQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKREVP 198
Query: 374 SLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKPGK 415
+ TP Y Y +DM E P TI PGK
Sbjct: 199 AYTTTETPTGFNADYLSSVANYSVDMPLPDVDPSFQWLRHFEVHLPFTATLTIHFPVPGK 258
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
L ++ P S+ KTRLL ++ +F + H+P F +V
Sbjct: 259 -----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLRVFE 302
Query: 476 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
ED +V Q+ + + + D+ + YR
Sbjct: 303 EDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|239503460|ref|ZP_04662770.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB900]
gi|421679138|ref|ZP_16119017.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC111]
gi|410391630|gb|EKP43997.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC111]
Length = 358
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +RGK+ V++ C HR PL LG V G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRGKENQVAAVEDFCPHRGAPLSLGYVEYG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVLMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|418472321|ref|ZP_13042068.1| oxidase, partial [Streptomyces coelicoflavus ZG0656]
gi|371547060|gb|EHN75473.1| oxidase, partial [Streptomyces coelicoflavus ZG0656]
Length = 384
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 19/191 (9%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
+ N W+P+ + ++++D + V++R DG C C H+ L G +
Sbjct: 2 IPNQWYPIVETQEVRNDKPLGVRRMGQDLVLWRDIDGNLVCQGARCPHKGANLGDGRMKG 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPS--TQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
I+CPYHG+ Y DG C +P+ Q R ++++ + P EQ G++W+W GDE P A
Sbjct: 62 NTIECPYHGFRYGADGACRVIPAMGAQARIPGSLRVATYPVREQFGLVWMWWGDERPAAD 121
Query: 322 IPCLLPP----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 377
+P + P +++A P+ + +++LL+ H + H + + L+
Sbjct: 122 LPPVQAPPEVTDNRKLYATKRWTRPVHYTRYIESLLEFYHVTYVHRDHWFN--YIDYLLL 179
Query: 378 FLTPAS-GLQG 387
+ TP+ GL G
Sbjct: 180 YGTPSKLGLDG 190
>gi|260549936|ref|ZP_05824151.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
RUH2624]
gi|424056286|ref|ZP_17793807.1| vanillate O-demethylase oxygenase subunit [Acinetobacter
nosocomialis Ab22222]
gi|425741333|ref|ZP_18859483.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-487]
gi|260406928|gb|EEX00406.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
RUH2624]
gi|407441326|gb|EKF47832.1| vanillate O-demethylase oxygenase subunit [Acinetobacter
nosocomialis Ab22222]
gi|425492639|gb|EKU58893.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-487]
Length = 358
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +++D + E V +R K+ V++ C HR PL LG V +G
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKIVFYRAKENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
+ C YHG DGK MP+ ++ K+ E+ G IW+WPG++ L
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAKL 120
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 121 PTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|386034793|ref|YP_005954706.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
KCTC 2242]
gi|424830593|ref|ZP_18255321.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|339761921|gb|AEJ98141.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
KCTC 2242]
gi|414708021|emb|CCN29725.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 345
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA + D+ + E VI+R K + ++ C HR PL LG E
Sbjct: 21 RLARCWHPVARACDIAGAPVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHEE 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEPP 318
I CPYHG + DG+C ++PS + + K S E+ G+IW P + PP
Sbjct: 80 EGIVCPYHGLRFGEDGRCNRIPSRPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPPP 139
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 376
T+P +GF+ +E+ G ++ LD+AH + HT TFA VP
Sbjct: 140 LPTMP-HWDDAGFQQINCPALEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDYT 198
Query: 377 KFLTPASGLQGYWDP---YPIDMEFRPP 401
TP + YW YP +FR P
Sbjct: 199 PQETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|302832459|ref|XP_002947794.1| hypothetical protein VOLCADRAFT_88044 [Volvox carteri f.
nagariensis]
gi|300267142|gb|EFJ51327.1| hypothetical protein VOLCADRAFT_88044 [Volvox carteri f.
nagariensis]
Length = 645
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 214 LKNFWFPVAFSTDLKDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-----NEGR 268
L+NFW+ A S ++ T +P ++ C+ + C HR PL LG +
Sbjct: 310 LQNFWYAAALSDNV---TSKPLQVY--------CLDDVCPHRGAPLSLGWTKTSPGGKSC 358
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIW------PGDE- 316
+ CPYHGW ++ +G E++PS R + S P E+ G +W++ P DE
Sbjct: 359 VVCPYHGWAFTGEGALEEVPSQSPEVGFPRRPVVDSYPVVERGGFVWLFFGSKSLPADER 418
Query: 317 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
PP +P L P+ ++ E+ + P H + +N LD+AH + H +F
Sbjct: 419 PPIPVVPELEDPNWRPVYGELEFDCP--HWSVFENALDMAHIHYIHNGSFGN 468
>gi|386397519|ref|ZP_10082297.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM1253]
gi|385738145|gb|EIG58341.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM1253]
Length = 349
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 109/291 (37%), Gaps = 52/291 (17%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN- 294
V++R DG +++ C HR PL G + + C YHG +Y+ G+C MPS + N
Sbjct: 34 VMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGRCTFMPSQETINP 93
Query: 295 -VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP-----------SGFEIHAEIVMELP 342
+++ P E+ IW+W GD P P L+P G IH
Sbjct: 94 SACVRAYPVVERHRYIWLWMGD--PALADPALVPDLHWNHDPAWAGDGKTIHVN------ 145
Query: 343 IEHGLLLDNLLDLAHAPFTHTSTFA------------------------KGWSVPSLVKF 378
++ L+LDNL+DL H F H S+ +G P
Sbjct: 146 CDYRLVLDNLMDLTHETFVHGSSIGNEAVAEAPFDVTHGEKTVTVTRWMRGIEAPPFWAK 205
Query: 379 LTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSS 438
SGL W + F PC + +G++ G + R + L+ P +
Sbjct: 206 QLGKSGLVDRWQI----IRFEAPCTIAIDVGVAPTGTGAPEGDRSQGVNGFVLNTITPET 261
Query: 439 RKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 489
K + ++ + + R + +ED ++ QQ M+
Sbjct: 262 EKTCHYFWAFVRNYQLGEQRITTEI---REGVSGIFHEDELILEAQQRAMD 309
>gi|197106601|ref|YP_002131978.1| phenylpropionate dioxygenase [Phenylobacterium zucineum HLK1]
gi|196480021|gb|ACG79549.1| putative phenylpropionate dioxygenase [Phenylobacterium zucineum
HLK1]
Length = 362
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 32/175 (18%)
Query: 214 LKNFWFPVAFSTDLK-------DDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VN 265
L + W+ A S+DLK + EP ++ RG G +++ C HRA PL G V
Sbjct: 20 LTDIWYFAALSSDLKPGRPARYEILGEPVMLGRGPSGQLFALRDICPHRAAPLSAGRIVR 79
Query: 266 EGR---IQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPG-- 314
+G+ ++CPYHGW++ DG C +PS + ++++ P E +G++++W G
Sbjct: 80 DGQGEAVECPYHGWKFGADGGCTAIPSLTADQAMDIGRIRVRRYPVAESQGLVFVWIGRD 139
Query: 315 -----DEPPTATIPCLL--PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
D+PP P ++ PP ++ +V + I+H ++ L+D AH P+ H
Sbjct: 140 AASEPDQPPP-VFPGVVGGPP---KLVDRMVFDAHIDHAVV--GLMDPAHGPYVH 188
>gi|172036878|ref|YP_001803379.1| cell death suppressor protein [Cyanothece sp. ATCC 51142]
gi|354554681|ref|ZP_08973985.1| Pheophorbide a oxygenase [Cyanothece sp. ATCC 51472]
gi|171698332|gb|ACB51313.1| putative Rieske [2Fe-2S] domain-containing cell death suppressor
protein [Cyanothece sp. ATCC 51142]
gi|353553490|gb|EHC22882.1| Pheophorbide a oxygenase [Cyanothece sp. ATCC 51472]
Length = 465
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 126/297 (42%), Gaps = 34/297 (11%)
Query: 218 WFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE- 266
W+PV + DL D +P VI+ ++ CV + C HR PL G +NE
Sbjct: 30 WYPVHYIEDL--DKTKPTSFTLLEKNIVIWWDENNSQWCVFDDQCPHRLAPLSQGRINES 87
Query: 267 GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG--DEP 317
G ++CPYHGW +S G CE +P + Q +K+ P +G+++++ G +
Sbjct: 88 GCLECPYHGWAFSGQGNCEVIPQQKPEGKAEQSPRASVKTYPTKVAQGLLFVYAGKTENA 147
Query: 318 PTATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV-P 373
P IP L S + ++P + L++N+LD +H P+TH + +V P
Sbjct: 148 PKTPIPLVDVLDEKSDEWVCINTFRDIPYDALTLMENVLDSSHIPYTHHKSVGNRSNVSP 207
Query: 374 SLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLH 432
++ + G +G W+ P R + T PG + T + +
Sbjct: 208 VDLEVVESGKWGFKGVWEEGP-----RKGTLGKQTTYFFAPGMMYHDLTSKQFGRTLTVV 262
Query: 433 VCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLRLVLGQQER 487
P + K RL R F+S + + + H + + ED ++ L QER
Sbjct: 263 YATPIGKGKCRLFARFPFKFSSPIPKFFINLTPRWYSHIGQNGVLEDDQIFLHYQER 319
>gi|242037721|ref|XP_002466255.1| hypothetical protein SORBIDRAFT_01g004440 [Sorghum bicolor]
gi|241920109|gb|EER93253.1| hypothetical protein SORBIDRAFT_01g004440 [Sorghum bicolor]
Length = 525
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 127/299 (42%), Gaps = 40/299 (13%)
Query: 250 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRN--------VKIKSL 300
+ C HR PL G +++ GR+QC YHGW + G C+ +P + S
Sbjct: 128 DACPHRLAPLSEGRIDDKGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSPKACVASY 187
Query: 301 PCFEQEGMIWIWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLDN 351
PC Q ++W +P +P + P +P P ++ + +LP + +L++N
Sbjct: 188 PCVVQNNILWFYPRADPEYKDVLQRKRPPFIPEIDDPEFVTVYG--IRDLPYGYDILIEN 245
Query: 352 LLDLAHAPFTHTST------FAKGWSVPSLVKFLTPASGLQGYWDPYPID-MEFRPPCMV 404
LLD AH P+ H + + PS +K + +QG+ P +F PC
Sbjct: 246 LLDPAHVPYAHKGIIRGILEYDREGGGPSKMKIEQ--ANIQGFVSPQERGYFQFVAPCT- 302
Query: 405 LSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY 464
+ P ++ ++ + + +C+P S ++R+++ + L H+ ++
Sbjct: 303 ----SFAAPFPQPQEDKKKKVPRVMLVFLCIPVSPGRSRVIWAFPRNIGVWLHHI-TPRW 357
Query: 465 LWRHFAEQVLNEDLRLVLGQQER-----MNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
L+ VL+ D+ L+ ++ + ++N +P D + V +R W K
Sbjct: 358 LYHVGQNLVLDSDIFLLHVEERKFATVGLDNWQKACYVPTSSDSMVVAFRNWFKKFSKN 416
>gi|148557754|ref|YP_001265336.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148502944|gb|ABQ71198.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 365
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 144/371 (38%), Gaps = 61/371 (16%)
Query: 192 VKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFS----TDLKDDTM--EPWVIFRGKDGIP 245
+K R ++G P+ + N W+ F+ DLK T+ P V +R G P
Sbjct: 8 IKEASRRADARLAGRATPF---IFNCWYVAGFAWEFARDLKARTILGRPLVFYRTSAGDP 64
Query: 246 GCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCF 303
+ + C HR+ PL ++ I C YHG Y + G C + P+ R + ++S P
Sbjct: 65 VALSDRCVHRSFPLSKSQLDGDSIVCGYHGLRYDSGGACIEAPAVGECPRGIGVRSYPLR 124
Query: 304 EQEGMIWIWPGDEPPTATIPC-------LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLA 356
+Q ++WIW GD P +P P S H LP + L +NLLDL
Sbjct: 125 QQGPLVWIWMGDAAPADELPTGSWVADEQWPASQQYYH------LPASYVALHENLLDLT 178
Query: 357 HAPFTHTSTF------AKGWSVP--------SLVKFLTPA---------SGLQGYWDPYP 393
H F H +F A ++V +L + + P +GL G
Sbjct: 179 HLSFLHAHSFGTPDYAAAPYAVDLDEDAGRFALTRSVVPTRLPPVWAEPTGLTGKDAARV 238
Query: 394 IDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
EF P + + E + R T + H+ P + T +FA
Sbjct: 239 TTSEFLGPSTHVVSAQFYGLDVAEAERGR---TGIRTAHLPTPETATSTHYFIHHGRNFA 295
Query: 454 SVLKHVP-FMQ-YLWRHFAEQV--LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
V FMQ L F E V L E R++ E + + + + D+ G+ R
Sbjct: 296 QDDPSVTDFMQEQLTVAFTEDVVGLTEIERMIAETPED-----DRYEISLASDRPGLAMR 350
Query: 510 LW--RDALEKG 518
W R A+E+G
Sbjct: 351 RWIYRTAMEEG 361
>gi|365899304|ref|ZP_09437217.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3843]
gi|365419928|emb|CCE09759.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3843]
Length = 347
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 127/326 (38%), Gaps = 54/326 (16%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++K + + V++R DG +++ C HR PL G + +
Sbjct: 8 NAWYAAAWDAEVKQALLPRTICGKHVVMYRKADGTVTALEDACWHRLVPLSKGRLEGDTV 67
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG +++ G+C MPS + N +++ P E+ IW+W GD P P +P
Sbjct: 68 VCGYHGLKFNAQGRCTFMPSQETINPSACVRAYPAIERHRFIWLWMGD--PALADPADIP 125
Query: 328 P-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------- 368
G IH + ++ L++DNL+DL H F H S+
Sbjct: 126 DMHWNHDPAWAGDGKTIHVK------CDYRLVVDNLMDLTHETFVHGSSIGNEAVAEAPF 179
Query: 369 ----GWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 415
G ++ + F G +G D + I + F PC V +G++ G
Sbjct: 180 DVTHGERTATVTRWMRGIEPPPFWAKQLGKEGLVDRWQI-IRFEAPCTVTIDVGVAPAGT 238
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
+ R + L+ P + + + ++ L + R +
Sbjct: 239 GAPEGDRSQGVNGMVLNTITPETERTCHYFWAFVRNYQ--LSEQRLTTEI-REGVSGIFR 295
Query: 476 EDLRLVLGQQERM--NNGANVWNLPV 499
ED ++ QQ M N G +NL +
Sbjct: 296 EDELILEAQQRAMDENPGRVFYNLNI 321
>gi|87199507|ref|YP_496764.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135188|gb|ABD25930.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 351
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 211 NTR---LKNFWFPVAFSTDL-------KDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLH 260
NTR ++N W+ + + + EP V +R DG + + C HR PL
Sbjct: 3 NTRPNFVRNCWYVAGWDYEFTAGKPHPRTFLAEPVVFYRKGDGTLVAMADRCVHRLAPLS 62
Query: 261 LGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPP 318
LG + I+C YHG ++ DGKC ++P + + I++ P E+ WIW GD P
Sbjct: 63 LGRLEGDDIRCMYHGMRFTADGKCVEIPGQDMIPSSACIQTYPVVEKGSWAWIWMGD--P 120
Query: 319 TATIPCLLPPS-GFEIHAEIV----MELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 370
LLP + G + ++ ++ H L+ DNLLDL+H + H ++F GW
Sbjct: 121 HLADAALLPDARGLDDPVWVLKSGQLDYAAPHELINDNLLDLSHLAYVHVASFGATPGW 179
>gi|367475962|ref|ZP_09475388.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 285]
gi|365271749|emb|CCD87856.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 285]
Length = 347
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 129/328 (39%), Gaps = 42/328 (12%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ ++K + + V++R DG +++ C HR PL G + +
Sbjct: 8 NAWYAAAWDAEVKQALLPRTICGKHVVMYRKADGTIAALEDACWHRLVPLSKGRLEGDTV 67
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG ++S G+C MPS + N +++ P E+ IW+W G+ P P +P
Sbjct: 68 VCGYHGLKFSPQGRCAFMPSQETINPSACVRAYPAVERHRFIWLWMGE--PALADPATIP 125
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------GW 370
+ +++ ++ L++DNL+DL H F H S+ G
Sbjct: 126 DMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHGE 185
Query: 371 SVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 421
++ + F G G D + I + F PC V +G++ G +
Sbjct: 186 RTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTVTIDVGVAPTGTGAPEGD 244
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
R + L+ P + K + + ++ L + R + ED ++
Sbjct: 245 RSQGVNGMVLNTITPETDKTCHYFWAFARNYQ--LSEQRLTTEI-REGVSGIFREDEFIL 301
Query: 482 LGQQERM--NNGANVWNLPVGYDKLGVR 507
QQ M N G +NL + + R
Sbjct: 302 EAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|351731557|ref|ZP_08949248.1| Rieske (2Fe-2S) domain-containing protein [Acidovorax radicis N35]
Length = 351
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 95/238 (39%), Gaps = 41/238 (17%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +R + + C HR PL LGSV +G
Sbjct: 4 KNTWYVACTPDEIADKPLGRTICGEKMVFYRPAPDQVAALDDFCPHRGAPLSLGSVCDGH 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEP---PTATIPC 324
+QC YHG GK MP +++ K +S P E+ G IW+WPGD PT
Sbjct: 64 LQCGYHGLRVECTGKSVSMPGQRVQGFPKTRSFPAVERYGFIWVWPGDAAQADPTKIHHL 123
Query: 325 LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH---------------------- 362
+ + + + ++ L++DNL+DL H + H
Sbjct: 124 HWADNPEWAYGGGLYHIACDYRLMVDNLMDLTHETYVHSTSIGQKEIDEVPCKTRVEGDE 183
Query: 363 --TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
TS F +G P K +GL D +D F PP VL +G++ G
Sbjct: 184 VITSRFMEGIEAPPFWKMALRMNGLP---DDQLVDRWQICHFTPPSHVLIEVGVALAG 238
>gi|227015857|gb|ACP17954.1| putative Rieske (2Fe-2S) protein [Pseudomonas nitroreducens]
Length = 353
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ A++ +L + + EP VI+R D +++ CAHR PL LG
Sbjct: 3 IRNCWYVAAWTEELSAEFLTCTIINEPIVIYRKSDNSLVALEDRCAHRMSPLSLGKREGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
I+C YHG +S G C ++P + +KS P E+ IW+W GD P L
Sbjct: 63 DIRCMYHGLVFSPSGNCIEIPGQDKIPARLCVKSYPVVERHSWIWVWMGD--PELADEDL 120
Query: 326 LPPSG-------FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
+PP+ F H + E + L+ DNL D +H + HT +F
Sbjct: 121 IPPAHGGGNNEWFLTHNHLDYE--TNYMLICDNLTDFSHLGYVHTQSFGS 168
>gi|424933470|ref|ZP_18351842.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|407807657|gb|EKF78908.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
Length = 345
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA + D+ + E VI+R K + ++ C HR PL LG E
Sbjct: 21 RLARCWHPVARACDIAGAPVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHEE 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEPP 318
I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + PP
Sbjct: 80 EGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPPP 139
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 376
T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 140 LPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDYS 198
Query: 377 KFLTPASGLQGYWDP---YPIDMEFRPP 401
TP + YW YP +FR P
Sbjct: 199 PQETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|390993286|ref|ZP_10263466.1| rieske [2Fe-2S] domain protein [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372551979|emb|CCF70441.1| rieske [2Fe-2S] domain protein [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 350
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 134/334 (40%), Gaps = 55/334 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVN 265
RL W VA S+++ + EP V++R G + + ++ C HR PL +G+ +
Sbjct: 21 RLAQHWHAVALSSEVSEAPFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMGTAD 78
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 321
G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+ +
Sbjct: 79 GGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAGVSD 138
Query: 322 IPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWSVP 373
+PP GF+ ++ L+ +D+AH F HT+TFA+ VP
Sbjct: 139 ADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKREVP 198
Query: 374 SLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKPGK 415
+ TP Y Y +DM E P TI PGK
Sbjct: 199 AYTTTETPTGFNADYLSTVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPVPGK 258
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
L ++ P S+ KTRLL ++ +F + H+P F +V
Sbjct: 259 -----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLRVFE 302
Query: 476 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
ED +V Q+ + + + D+ + YR
Sbjct: 303 EDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|113477070|ref|YP_723131.1| Rieske (2Fe-2S) protein [Trichodesmium erythraeum IMS101]
gi|110168118|gb|ABG52658.1| Rieske (2Fe-2S) region [Trichodesmium erythraeum IMS101]
Length = 349
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 215 KNFWFPVAFSTDLKDD--TMEPW----VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+ VA S +L+ ++ W V++RG G +++ C HR L G V
Sbjct: 19 QNHWYAVARSIELQSQPLSITLWHQTIVLYRGCSGKVYGLEDICPHRFVKLSSGRVIADE 78
Query: 269 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YHGW + ++GKC +P + +L + +I++ P E G IW++PGD+ I
Sbjct: 79 LECTYHGWRFESNGKCSHIPYLASNQKLPSCQIRTFPVQELHGFIWLFPGDKSLANLISP 138
Query: 325 LLPPSGFEIH--AEI-VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 381
L P ++ A I V++ + L++NL+D+ H H + W+ L+
Sbjct: 139 LEIPEWDHLNYIATISVIKCRAHYSYLVENLMDMYHG---HLHQNWQAWAAAKLIDLSEN 195
Query: 382 ASGLQGYWDP---YPID 395
+ Y++ Y ID
Sbjct: 196 DHRVDAYYEAQSYYKID 212
>gi|260427622|ref|ZP_05781601.1| rieske domain protein [Citreicella sp. SE45]
gi|260422114|gb|EEX15365.1| rieske domain protein [Citreicella sp. SE45]
Length = 356
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 105/263 (39%), Gaps = 36/263 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +ST++ D+ E V+FR DG +++ C HR PL G
Sbjct: 5 VKNAWYVAGWSTEIDDELRRFTILGEHVVMFRTSDGSVAALEDRCPHRLLPLSKGKRIGD 64
Query: 268 RIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPGDEP---PTAT- 321
+QC YHG + G C ++P T L ++ +++ P E+ G++WIW GD P A
Sbjct: 65 TVQCGYHGLTFDCSGACVRVPGQTNLPKSAYVEAYPIVEKHGIVWIWMGDAEKADPEAVF 124
Query: 322 -IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK- 377
+P P G+ H + L + + +NL+D AH F H +T S VP V+
Sbjct: 125 DMPEFTDP-GWAAHHGDALHLKSNYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVQT 183
Query: 378 ------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 419
F G G D + PC + G + K +
Sbjct: 184 EGEAIVAWRWIRDAEPIGFFKAFGGFTGNVDRWHY-YYLYTPCTAVIDFGSIETEKHCAE 242
Query: 420 NTRQCATHLHQLHVCLPSSRKKT 442
R + LH P + T
Sbjct: 243 EDRDQGVRIFALHFMTPVTETYT 265
>gi|87199506|ref|YP_496763.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135187|gb|ABD25929.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 356
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 113/275 (41%), Gaps = 47/275 (17%)
Query: 211 NTR-LKNFWFPVAFSTDLKDDTME-------PWVIFRGKDGIPGCVQNTCAHRACPLHLG 262
NTR L+N W+ A S++++ + +I+R DG P +++ C HR PLH+G
Sbjct: 8 NTRYLENAWYVAALSSEVQGQALFHRKILDISVMIYRLSDGSPTALRDRCPHRFAPLHMG 67
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPT 319
I C YH +++ G C P +++ P E+ G IWIW G++
Sbjct: 68 KREGDEISCFYHALRFNSVGTCTHNPHGNGNIPDGANVRAFPLLERHGFIWIWMGEQ--- 124
Query: 320 ATIPCLLP------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 372
P LLP SG M + L++DN++DL+H H + +G
Sbjct: 125 TADPDLLPDFSPLEDSGPNAVGYTYMHMDANFELIVDNVMDLSHIDHVHGEIISTRGKLS 184
Query: 373 PSLVKFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGIS 411
P + K + + + W+ P P D+ + PP + ++
Sbjct: 185 PKIPKIRSTSRSISSRWEWEQQPAMLILAPFLPAPDAEARQYFDITWTPPANIQLSV--- 241
Query: 412 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 446
G ++G+ + A + LH P ++ T +
Sbjct: 242 --GAVQGELSFDEAVMQYDLHTATPETQFTTHYFF 274
>gi|423435967|ref|ZP_17412948.1| hypothetical protein IE9_02148 [Bacillus cereus BAG4X12-1]
gi|401123450|gb|EJQ31226.1| hypothetical protein IE9_02148 [Bacillus cereus BAG4X12-1]
Length = 315
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 138/323 (42%), Gaps = 46/323 (14%)
Query: 218 WFPVAFSTDLKDDTMEP------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
W+ V+++ D+K ++ +V++R + G + C HR L LG V G++ C
Sbjct: 13 WYAVSYAKDIKKIPVKKRVAGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLVC 72
Query: 272 PYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDE--PPTATIPCL 325
PYHGWE+ + G C ++PS + + S P E+ G+IWI+P E PP +
Sbjct: 73 PYHGWEFDSCGTCVRIPSQPNKPIPKFAHTSSYPVKEKIGLIWIYPDSEETPPEWKTFHV 132
Query: 326 LPPSGFEI---HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + F++ HA L ++++LD+AH + H T + K +
Sbjct: 133 MENTPFKLSFFHATWNAHLTRS----IESVLDIAHLAYVHKKTIGRK------TKAESTN 182
Query: 383 SGLQGYWDPYPID-----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPS 437
L+G D + +E++ P + GK E ++ Q T P
Sbjct: 183 YKLEGTLDQFIFSNGNAYLEYKFPHQWM-----LHSGKQENESFIQYIT-------FTPI 230
Query: 438 SRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNL 497
++T + M + LK+ P + L F+ +VL ED +V Q R A
Sbjct: 231 DEEETLI---MGYTGRTFLKYFPLLDLLLAKFSLRVLKEDQIIVESQHPRPIPEALKMEA 287
Query: 498 PVGYDKLGVRYR-LWRDALEKGA 519
V D V++R W L+ G+
Sbjct: 288 HVHADMAQVQFRKRWFQFLQNGS 310
>gi|158317433|ref|YP_001509941.1| Rieske (2Fe-2S) domain-containing protein [Frankia sp. EAN1pec]
gi|158112838|gb|ABW15035.1| Rieske (2Fe-2S) domain protein [Frankia sp. EAN1pec]
Length = 353
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 82/182 (45%), Gaps = 19/182 (10%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRA 256
++G + + L++ W PVA S +L D+ + EPWV+ R D + + C HR
Sbjct: 1 MTGRLTNTDPALRHGWHPVARSPELADEPIAVRLLGEPWVLARLDDQV-AAFADWCPHRL 59
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIW 310
PL G V + C YHGW + G+C +P+ R I E+ G++W
Sbjct: 60 APLSAGRVEGHELVCGYHGWRFVASGECTAVPALGPGIPAPRRARAIPPWGVTERHGLVW 119
Query: 311 IWPGDEPPTATIPCLLPPS---GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
I P + P A I LP + GF+ GLL DN LD AH PF H +T
Sbjct: 120 IAPAE--PFADI-IELPEAAEDGFDDAWLPAARTTACAGLLADNFLDTAHFPFVHAATIG 176
Query: 368 KG 369
G
Sbjct: 177 AG 178
>gi|336250321|ref|YP_004594031.1| (hypo)xanthine hydroxylase [Enterobacter aerogenes KCTC 2190]
gi|334736377|gb|AEG98752.1| (hypo)xanthine hydroxylase [Enterobacter aerogenes KCTC 2190]
Length = 345
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 126/303 (41%), Gaps = 46/303 (15%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA S D+ + E VI+R + + ++ C HR PL LG +E
Sbjct: 21 RLAKCWHPVARSADIGPQPVKATLLDEKLVIYRLHERV-VVARDVCPHRGVPLTLGFHDE 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-SLPCF---EQEGMIWI---WPGDEPPT 319
I CPYHG + DG+C ++PS+ + + K +L C+ E G++W+ + D PP
Sbjct: 80 EGIICPYHGLRFGEDGRCNRIPSSPNQPIPAKLNLTCYAAEEHYGLVWVCLDYDADNPPR 139
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF--AKGWSVPSLVK 377
GF+ E+ G ++ LD+AH + HT TF A+ VP +
Sbjct: 140 LPTMPHWADDGFQQLTCPAFEVNGFAGRQVEGFLDVAHFAWIHTDTFADAENQQVPDYLP 199
Query: 378 FLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNTR 422
T + YW YP +R P +T+ I PG+
Sbjct: 200 EETENGFVVDYWSTVGNYPASAGYRAPEGFQWLRRFEMHLPFTATLTIHFPGE------- 252
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 482
L ++ P S + TR+ ++ +F HVP + F +V ED +V
Sbjct: 253 ---ARLVIMNAASPVSSRVTRMFAPIARNFD---LHVPVEEVY--AFNLRVFEEDRLMVE 304
Query: 483 GQQ 485
Q+
Sbjct: 305 SQR 307
>gi|213385123|dbj|BAG84251.1| putative oxygenase [Streptomyces griseoviridis]
Length = 442
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
+ N W+PVA S D+K + E V++R G + C H+ L G +N+
Sbjct: 2 IPNQWYPVARSRDVKQNKPKGAMRLGEEVVMWRDARGNAVVQEARCPHKGANLGAGRINQ 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMP--STQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
++CPYHG+ + G CE +P ++ R ++I++ P E+ M+W+W G+E +
Sbjct: 62 NALECPYHGFRFGAGGDCEAVPCLGSEARIPKGLRIRNYPVREEHDMVWMWWGEE--RES 119
Query: 322 IPCL-LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
P + +PP +H + P+ + ++++L+ HAPF H ++
Sbjct: 120 YPEIDIPPEVTRWKGVHVTGSWQQPVHYTRYIESMLEFYHAPFVHRGSW 168
>gi|427739261|ref|YP_007058805.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
gi|427374302|gb|AFY58258.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
Length = 374
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 32/166 (19%)
Query: 216 NFWFPVAFSTDLKDDTMEPWVI-------FRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N+W+P ++++LK + P VI +R +DG +++ C H+ LH G V
Sbjct: 24 NYWYPATWASELKPSQVLPVVIWNSAIALYRSQDGQVHAIEDACPHKGVALHKGKVTGEN 83
Query: 269 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPG---------- 314
+ CPYHGWE++ +G C +P +L K +S E+ ++WI+PG
Sbjct: 84 LACPYHGWEFNGNGICTNIPYFPKDQKLPCAKARSYAVREKYNIVWIFPGAVEDSEKVEL 143
Query: 315 ------DEPPTATIPCLLPPSGFEIHAEIVME--LPIEHGLLLDNL 352
D+P IP P F+ H I E + + HG L +NL
Sbjct: 144 PSVPEYDDPNWLAIPI---PGEFKAHFSICNENTMDVFHGYLHENL 186
>gi|257059528|ref|YP_003137416.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8802]
gi|256589694|gb|ACV00581.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8802]
Length = 349
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 149/348 (42%), Gaps = 39/348 (11%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
++ L+N W+ LK M EP ++ R +DG +++ C HR PL G
Sbjct: 2 SSLLRNAWYVALPGKQLKPGKMTHKKMLGEPVLVGRREDGEVFAMRDICPHRGIPLQYGW 61
Query: 264 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW---- 312
+ + C YHGW+++T DG+C ++PS + +++ + PC E +G IW++
Sbjct: 62 LEGDGVCCCYHGWKFNTSDGRCSEIPSLTEYDDLDISRIRVPTYPCREVQGNIWVYFAED 121
Query: 313 ------PGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 364
P + PP TIP + P I I I+H ++ L+D AH P+ H+S
Sbjct: 122 SKKEINPSELPPVPTIPDFGKVEPG---ISETIHFACHIDHAII--GLMDPAHGPYVHSS 176
Query: 365 TFAKGWSVPSLVKFLTPASGLQGY-WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 423
+ + VK QG+ PY + + RP ++ + + I E + R
Sbjct: 177 WWWRSGPRKFRVKEKQYEPVAQGFRLVPYDMPVSARPYKILGNQVSIEI--VFELPSVRT 234
Query: 424 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM---QYLWRHFAEQVLNEDLRL 480
+ CL ++ T + F S+ +P+M + L Q L +D +
Sbjct: 235 EILRGDRYSACLLTT--ITPIDENECEAFQSIYWTIPWMGLFKPLLSLLTRQFLAQDRDV 292
Query: 481 VLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
V+ QQE + + + + +RL ++ + A+ PF P+
Sbjct: 293 VIQQQEGLKYNPALMLIDDADTQAKWYFRLKQEYQKSQAENRPFKNPV 340
>gi|414164011|ref|ZP_11420258.1| hypothetical protein HMPREF9697_02159 [Afipia felis ATCC 53690]
gi|410881791|gb|EKS29631.1| hypothetical protein HMPREF9697_02159 [Afipia felis ATCC 53690]
Length = 382
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-N 265
++N W+ + + D + + +P V +R K G + CAH+ PL G +
Sbjct: 15 VENCWYMIGTAADFPAEKLTGHVVAKKPIVAWRTKHGQVVAYDDRCAHKRFPLSKGRLMQ 74
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTAT 321
+G ++C YHG Y GKC +PS + ++ P EQ+G+IW+WPG+ + T
Sbjct: 75 DGTLECAYHGLRYDMTGKCVMIPSHPTGPISPQAIVRPYPIVEQDGLIWLWPGNPALSGT 134
Query: 322 -IPCLLPPSGFEI-HAEIV--MELPIEHGLLLDNLLDLAH 357
P LP G E EI+ ME+P + LL++NLLD+ H
Sbjct: 135 RKPPRLPEVGSEDWKTEIIGPMEIPANYLLLIENLLDITH 174
>gi|284991273|ref|YP_003409827.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Geodermatophilus obscurus DSM 43160]
gi|284064518|gb|ADB75456.1| Rieske (2Fe-2S) iron-sulphur domain protein [Geodermatophilus
obscurus DSM 43160]
Length = 424
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 44/309 (14%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-NEGR 268
N W+ A+ ++ + + P V++R G P + + C HR PL +G + +
Sbjct: 25 NAWYAAAWDHEVGRNLLPTTIANRPVVLYRTTGGRPVALADACWHRLAPLSMGKLRGDDE 84
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
I C YHG Y DG+ MP+ + N + S P E+ +WIWPGD P P L+
Sbjct: 85 IMCGYHGICYDPDGRATFMPAQETINPSATVHSFPVVERHRYVWIWPGD--PALADPALV 142
Query: 327 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------WSVPSL 375
P + H + + + + L++DNL+DL H F H S+ ++V
Sbjct: 143 PDLYWNEHPDWAGDGKTIRVNCSYQLIVDNLMDLTHEQFVHGSSIGHDALSESEFTVTHT 202
Query: 376 VKFLTPASGLQG-----YW-----DPY-----PID----MEFRPPCMVLSTIGISKPGKL 416
+ +T + G +W D + P+D + + P + +G++K G
Sbjct: 203 DRTVTVTKWMLGIDPPPFWKRNLQDRFPDYEGPVDRWQIINYTAPSTIAIDVGVAKAGTG 262
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 476
+ R ++ P + L+ + D+ + K V + R V E
Sbjct: 263 APEGDRSQGVTGTVINTMTPETDNTCHYLWAFARDWC-LDKQV--ITTRLREGVSNVFFE 319
Query: 477 DLRLVLGQQ 485
D +++ QQ
Sbjct: 320 DEQMLEAQQ 328
>gi|433647375|ref|YP_007292377.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium smegmatis JS623]
gi|433297152|gb|AGB22972.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium smegmatis JS623]
Length = 351
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 82/169 (48%), Gaps = 19/169 (11%)
Query: 214 LKNFWFPVAFSTDL---KDDTM--EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
L+ W+P+A + DL + T+ V FR D P + + C HR LHLG+V
Sbjct: 10 LRRGWYPIARAVDLDRPRQATLLGRRLVTFRTADNRPRVLPDRCLHRGGALHLGAVIGDS 69
Query: 269 IQCPYHGWEY-STDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
I+CPYHGW + DG C +PS ++ I + P E+ G++W GD P
Sbjct: 70 IECPYHGWRWRGADGHCVYIPSNGPSAPIPKSAVIDAFPTVERYGLVWTCVGD--PLTGP 127
Query: 323 PCL--LPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTSTFA 367
P L L P G A ++ +E G+L ++N D+AH PF H T
Sbjct: 128 PHLPELEPLGMTYAAGDPVD--VEAGILAAMENFRDVAHFPFVHRGTMG 174
>gi|386399158|ref|ZP_10083936.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM1253]
gi|385739784|gb|EIG59980.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM1253]
Length = 445
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 113/275 (41%), Gaps = 51/275 (18%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVI---------FRGKDGIPGCVQ 249
K L SGP L+ FW PV S +L + EP I FR G+ G +
Sbjct: 8 KFLTESGPGTGMGELLRRFWIPVLLSEELPELDGEPKKIIVLGEELLAFRDTRGVVGLID 67
Query: 250 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFE 304
C HR L LG E I+C YHGW++ TDG+C MP++ ++IKS P E
Sbjct: 68 QYCPHRGANLWLGRNEECGIRCVYHGWKFDTDGRCVDMPTSYPDLNAKDLIRIKSYPARE 127
Query: 305 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL------------LDNL 352
MIW + G +P L E+ + LP H + L+
Sbjct: 128 WGEMIWAYMGPADAMPELPDL----------EMAL-LPASHRYVSKKWQDCNWVQALEGS 176
Query: 353 LDLAHAPFTHTSTFAKGWSVPSLVK-FLTPASGLQG---YW---DPYPIDMEFRPPCMVL 405
+D AH F H S + + + K F+ P + + W DP P+ ++ P L
Sbjct: 177 IDTAHFTFAHLSFDKEENEILDIKKHFVNPIARMSSDHMRWIAEDPRPV-IKIAPHAAGL 235
Query: 406 STIGISKPGKLEGQNTR--QCATHLHQLHVCLPSS 438
+ G G+L G++ + A L H PS+
Sbjct: 236 TIAG----GRLTGRDDIYWRIAQFLMPFHAYAPSA 266
>gi|289671663|ref|ZP_06492553.1| Rieske [2Fe-2S] region, partial [Pseudomonas syringae pv. syringae
FF5]
Length = 190
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 64 LVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
+ + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|149921338|ref|ZP_01909792.1| vanillate O-demethylase oxygenase, putative [Plesiocystis pacifica
SIR-1]
gi|149817771|gb|EDM77235.1| vanillate O-demethylase oxygenase, putative [Plesiocystis pacifica
SIR-1]
Length = 360
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 24/175 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ A+S++L ++ R ++G+ G + C HR L G +G
Sbjct: 4 VRNAWYVAAWSSELGRKPFARTLLGRHVMLIRTREGVVG-LGAQCPHRHADLSTGEFGKG 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF---EQEGMIWIWPGDEPPTATIPC 324
RI+CPYHGW + G+C ++P T R K LP + E++GMIW+W G+ PT +
Sbjct: 63 RIRCPYHGWSFDMQGRCVEVPGTS-RVPKAACLPRYPARERQGMIWVWFGEGEPTPS--- 118
Query: 325 LLPPSGFEIHAEIVME--------LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 371
PPS FE M + + L++N LD H TH T W+
Sbjct: 119 -EPPS-FEFSPSQRMRRQRTPPRLWEVSYVDLVENTLDPTHITATHARTLGSRWA 171
>gi|381162433|ref|ZP_09871663.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora azurea NA-128]
gi|418460036|ref|ZP_13031143.1| vanillate demethylase subunit A [Saccharomonospora azurea SZMC
14600]
gi|359739937|gb|EHK88790.1| vanillate demethylase subunit A [Saccharomonospora azurea SZMC
14600]
gi|379254338|gb|EHY88264.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora azurea NA-128]
Length = 377
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 116/299 (38%), Gaps = 59/299 (19%)
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
P ++R +G + + C HR PL G + +QCPYHG Y+ G+C MP+ +
Sbjct: 52 PLALWRNSEGRAVALADACWHRLAPLSKGKILGDELQCPYHGLRYNATGRCTAMPAQETI 111
Query: 294 N--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP-----------SGFEIHAEIVME 340
N + S P E+ +W+W GD P P +P G IHA+
Sbjct: 112 NPSAMVPSYPVVERYRYVWVWVGD--PDLADPDTVPDMHQMDDPGWAGDGETIHAD---- 165
Query: 341 LPIEHGLLLDNLLDLAHAPFTHTSTFAK---------------GWSVPSLVKFLTPA--- 382
+ L+LDNL+DL H F H S+ + +V ++ + P
Sbjct: 166 --CNYQLVLDNLMDLTHEEFVHASSIGQEELSEAEFDVVHEGNTVTVTRWMRDIDPPPFW 223
Query: 383 --------SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVC 434
G +G D + I + F P + +G++K G + R + + ++
Sbjct: 224 LKNMRDKFPGFEGKVDRWQI-ITFEAPSTICIDVGVAKAGTGAPEGDRSQGVNGYVMNTI 282
Query: 435 LPSSRKKTRLLY----RMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 489
P + + + LD ++ + R V ED ++ QQ+ ++
Sbjct: 283 TPETHRSCHYFWAFMRNYRLDSQTITTQL-------RQSVHGVFAEDEDMLRAQQDAID 334
>gi|374578640|ref|ZP_09651736.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM471]
gi|374426961|gb|EHR06494.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM471]
Length = 445
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 112/275 (40%), Gaps = 51/275 (18%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVI---------FRGKDGIPGCVQ 249
K L SGP L+ FW PV S +L + EP I FR G+ G +
Sbjct: 8 KFLTESGPGTGMGELLRRFWIPVLLSEELPELDGEPKKIIVLGEELLAFRDTRGVVGLID 67
Query: 250 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFE 304
C HR L LG E I+C YHGW++ TDG+C MP++ V+IKS P E
Sbjct: 68 QYCPHRGANLWLGRNEECGIRCVYHGWKFDTDGRCVDMPTSYPDLNAKDLVRIKSYPARE 127
Query: 305 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL------------LDNL 352
MIW + G +P L E+ + LP H + L+
Sbjct: 128 WGEMIWAYMGPADAMPELPDL----------EMAL-LPASHRYVGKKWQDCNWVQALEGS 176
Query: 353 LDLAHAPFTHTSTFAKGWSVPSLVK-FLTPASGLQG---YW---DPYPIDMEFRPPCMVL 405
+D AH F H S + + + K F+ P + + W DP P+ ++ P L
Sbjct: 177 IDTAHFTFAHLSFDKEENEILDIKKHFVNPIARMSSDHMRWIAEDPRPV-IKIAPHAAGL 235
Query: 406 STIGISKPGKLEGQNTR--QCATHLHQLHVCLPSS 438
+ G G+L G + + A L H PS+
Sbjct: 236 TIAG----GRLTGGDNIYWRIAQFLMPFHAYAPSA 266
>gi|365887916|ref|ZP_09426728.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. STM 3809]
gi|365336458|emb|CCD99259.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. STM 3809]
Length = 452
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTCAHRA 256
GP P ++ +W P A +L + +V+F+ G G + C HR
Sbjct: 14 GPDAPAGKLMRMYWQPAALVDELAGERPVRAVKLLGGDFVLFKDAQGRYGLLDRDCPHRG 73
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWI 311
L G + +G ++C +HGW + DG C + P+ + +NVK +S P E+ G++W
Sbjct: 74 ADLAFGRLEQGGLRCSFHGWLFDVDGACLETPAEPVGSPLCKNVKQRSYPVVEKGGILWA 133
Query: 312 WPGDEPPTA--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
W GD P A + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGDGAPPAFPDLDCFTAPDAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|258542908|ref|YP_003188341.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|384042829|ref|YP_005481573.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-12]
gi|384051347|ref|YP_005478410.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|384054454|ref|YP_005487548.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|384057689|ref|YP_005490356.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|384060330|ref|YP_005499458.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|384063621|ref|YP_005484263.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|384119631|ref|YP_005502255.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256633986|dbj|BAH99961.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|256637046|dbj|BAI03015.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|256640098|dbj|BAI06060.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|256643155|dbj|BAI09110.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|256646210|dbj|BAI12158.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|256649262|dbj|BAI15203.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|256652249|dbj|BAI18183.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256655306|dbj|BAI21233.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-12]
Length = 372
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 176 DQTCASPSTSKQ-SLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-- 232
DQT + S++++ +++ KGK+ + + S P ++W+PVA+S +LK
Sbjct: 2 DQTAQTDSSTQELAVEARKGKIDLRRVR-SNP---------DYWYPVAWSRELKPGKTIG 51
Query: 233 -----EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM 287
P + R G +++ CAHR PL G+V ++C YHGW Y G+C +
Sbjct: 52 TRYAGTPIALVRPDAGPVFALEDRCAHRQVPLSKGTVEGASVKCCYHGWAYGRSGRCIDV 111
Query: 288 P---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI---PCLLPPSGFEIHAEIVMEL 341
P +L N +++ PC EQ+GMI+++PGD P A I P L + +
Sbjct: 112 PYLGKGKLPN-GVRTFPCREQDGMIFVFPGD-PEKADIVPLPAHLARASNPAYKTRYFGT 169
Query: 342 PI--EHGLLLDNLLDLAHAPFTHTSTFAK 368
I + + +NL+D+ H F H+ +
Sbjct: 170 TIGCHYSFMHENLMDMNHQ-FMHSKQMGQ 197
>gi|443316513|ref|ZP_21045954.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783877|gb|ELR93776.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 337
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+ FW+PV L + E V++ + G P V++ C HR L LG V++G
Sbjct: 9 FRRFWYPVMPRQRLAEGPQTFELLGESLVLWLDQQGQPAAVRDRCCHRTAKLSLGRVDQG 68
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
RI CPYHGWE+ G C ++P + + ++ + C E+ G +W+ D P +
Sbjct: 69 RICCPYHGWEFDPSGACVRVPQLKADAAIPAHYRVAAYRCTERYGYVWVCLED--PLLDV 126
Query: 323 PCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P + + + E +++N LDLAH F HT TF
Sbjct: 127 PQIDEAEDPNYRLIQEFYEPWQCAGLRVMENELDLAHPTFVHTETFG 173
>gi|414341295|ref|YP_006982816.1| ring hydroxylating dioxygenase subunit alpha [Gluconobacter oxydans
H24]
gi|411026630|gb|AFV99884.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter oxydans
H24]
Length = 371
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 28/185 (15%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+PVA+S +++ +P + R +DG +++ CAHR PL LG V+
Sbjct: 35 DYWYPVAWSHEVQRGKTIGTRYAGQPIALVRPQDGSVFALEDRCAHRQVPLSLGRVSGEA 94
Query: 269 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD T P
Sbjct: 95 VQCCYHGWAYGRSGRCIDVPYLGKNKLPN-GVRTYPCREEGGLIFIFPGDPAKADTTPF- 152
Query: 326 LPPSGFEIH------AEIVMELPIEHGLLLDNLLDLAHAPFTHTST-------FAKGWSV 372
PS + ++ + + +NL+D+ H F H F G
Sbjct: 153 --PSLGSVRDPAYKTRRFGKKVACHYSFMHENLMDMNHQ-FMHMKQMGQMKPRFLGGKDE 209
Query: 373 PSLVK 377
P+LV+
Sbjct: 210 PTLVE 214
>gi|116075488|ref|ZP_01472748.1| cell death suppressor protein Lls1-like [Synechococcus sp. RS9916]
gi|116067685|gb|EAU73439.1| cell death suppressor protein Lls1-like [Synechococcus sp. RS9916]
Length = 436
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 28/175 (16%)
Query: 218 WFPVAFSTDLKDDTMEPWVIFRG--------KDGIPGCVQNTCAHRACPLHLGSVNE-GR 268
W+PVA+ DL + + + + C HR PL G +NE G
Sbjct: 9 WWPVAYVRDLDQSKPTRFTLLERDLVIWWDPSAALWRAFPDVCPHRLVPLSEGRINERGE 68
Query: 269 IQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
++CPYHGW + +G+C+ +P S LR+ + SLP +G++++W G P A
Sbjct: 69 LECPYHGWSFDGEGRCQHIPQAEEGTRSDSLRS-RCDSLPSATAQGLLFVWTG--APEAA 125
Query: 322 IPCLLP--------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P LP P + + + +LP++ LL+N+LD++H PFTH T +
Sbjct: 126 DPDSLPLVPQLQDNPESWTVQ-DTFRDLPMDALTLLENVLDVSHVPFTHHRTVGR 179
>gi|410943073|ref|ZP_11374814.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter
frateurii NBRC 101659]
Length = 371
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+PVA+S +L+ +P + R DG +++ CAHR PL LG V+
Sbjct: 35 DYWYPVAWSHELQRGKTIGTRYAGQPIALVRPLDGTVFALEDRCAHRQVPLSLGRVSGEA 94
Query: 269 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD T P
Sbjct: 95 VQCCYHGWAYGRSGRCIDVPYLGKNKLPN-GVRTYPCREEGGLIFIFPGDPAKADTTPF- 152
Query: 326 LPPSGFEIH------AEIVMELPIEHGLLLDNLLDLAHAPFTHTST-------FAKGWSV 372
PS + ++ + + +NL+D+ H F H F G
Sbjct: 153 --PSLGSVRDPAYKTRRFGKKVACHYSFMHENLMDMNHQ-FMHMKQMGQMKPRFLGGKDE 209
Query: 373 PSLVK 377
P+LV+
Sbjct: 210 PTLVE 214
>gi|453330570|dbj|GAC87316.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter
thailandicus NBRC 3255]
Length = 371
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 28/185 (15%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+PVA+S +++ +P + R +DG +++ CAHR PL LG V+
Sbjct: 35 DYWYPVAWSHEVQRGKTIGTRYAGQPIALVRPQDGSVFALEDRCAHRQVPLSLGRVSGEA 94
Query: 269 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD T P
Sbjct: 95 VQCCYHGWAYGRSGRCIDVPYLGKNKLPN-GVRTYPCREEGGLIFIFPGDPAKADTTPF- 152
Query: 326 LPPSGFEIH------AEIVMELPIEHGLLLDNLLDLAHAPFTHTST-------FAKGWSV 372
PS + ++ + + +NL+D+ H F H F G
Sbjct: 153 --PSLGSVRDPAYKTRRFGKKVACHYSFMHENLMDMNHQ-FMHMKQMGQMKPRFLGGKDE 209
Query: 373 PSLVK 377
P+LV+
Sbjct: 210 PTLVE 214
>gi|320160752|ref|YP_004173976.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
gi|319994605|dbj|BAJ63376.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
Length = 327
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 15/150 (10%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
E V +R KDG C+ + C H L G V E + CP+H +E+ G C +P+
Sbjct: 28 EKMVFWRRKDGKVVCMADRCPHLGASLSRGKVVEDHLACPFHAFEFDPGGACVYIPALGR 87
Query: 293 -----RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEI-----HAEIVMELP 342
+ ++IKS P +E G IWI+ G+ P LLPP F+I +A P
Sbjct: 88 NTPPPKAMRIKSYPTYEAHGFIWIYWGE--PQGE---LLPPKFFDIDETFSYAGYRQLWP 142
Query: 343 IEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 372
+ + +++N LD+ H P HT T +G V
Sbjct: 143 VHYSRMVENQLDVMHLPHVHTDTIGRGRKV 172
>gi|332708372|ref|ZP_08428350.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
gi|332352865|gb|EGJ32427.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
Length = 478
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 33/288 (11%)
Query: 250 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLP 301
+ C HR PL G +N+ GR++CPYHGW +S G+CE +P + R + SLP
Sbjct: 75 DQCPHRLAPLSEGRINQDGRLECPYHGWAFSGTGQCEVIPQQKERGKAEISQRACVNSLP 134
Query: 302 CFEQEGMIWIWPG--DEPPTATIPCL----LPPSGFEIHAEIVMELPIEHGLLLDNLLDL 355
+G+++++PG + +P + P G+ + +LP + L++N+LD
Sbjct: 135 TKIAQGLLFVYPGLAENAAKTKVPIVDALEEDPDGW-VCLNTFRDLPYDALTLMENVLDP 193
Query: 356 AHAPFTHTSTFAKGWSVP--SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
+H P+TH + +V L + G +G W P R + P
Sbjct: 194 SHIPYTHHRSVGNRANVSPVELEVVESGKCGFKGVWAEGP-----RKGTLGRQDTTFIAP 248
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFA 470
G + T + + P + + RL R F+S L + F++ + H
Sbjct: 249 GLMWHDLTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSKLPRL-FLKLTPRWYSHIG 307
Query: 471 EQVLNEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
+ + ED ++ L QER N + LP D + R W
Sbjct: 308 QNNVLEDDQIFLHYQERYIEQQGGSGNFNKAFYLPTKADLFVFQLRFW 355
>gi|398984223|ref|ZP_10690492.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
gi|399012013|ref|ZP_10714341.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398116619|gb|EJM06378.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398155922|gb|EJM44349.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
Length = 357
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 218 WFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
W+ A S +LKD + +P V+FR D +++ C HRA PL G+V ++C
Sbjct: 25 WYVAALSRELKDQPLGRTLLNKPVVLFRTADNQVAALEDRCCHRALPLSNGTVEARGLRC 84
Query: 272 PYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIPCLLPP 328
YHG + GKC ++P K+ + P EQ+ +IWIW G E P P PP
Sbjct: 85 GYHGLLFDDGGKCIEIPGQDKIPSKAKVPAYPVREQDQIIWIWFGSAEHPQ---PTFAPP 141
Query: 329 SGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 372
+++H+ V + L+ DNL+DL+H + H T S+
Sbjct: 142 V-YDVHSSGKYLFDGDVYHYDAPYQLIHDNLMDLSHLGYVHLHTIGGNASI 191
>gi|333896094|ref|YP_004469968.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333111359|gb|AEF16296.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 327
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
+KN W+ V S +LK + + V +R + C+ + C HR L LG V
Sbjct: 2 IKNQWYAVLDSKELKKNKPIGVTRFSQKLVFWRDELDNISCIFDKCCHRGASLALGKVAN 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
IQCP+HG++Y + GK +P+ L N K+ S E G IW+W G+ P
Sbjct: 62 NHIQCPFHGFKYDSSGKVTSIPANGKDRPVLSNFKVNSYIAKEAYGFIWVWYGE--PREN 119
Query: 322 IPCL---------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
+P + GF +EI + + ++N LD+ H PF H +T +G
Sbjct: 120 LPKIKFFEELKEGFSYGGF---SEI---WRVHYTRAIENQLDVVHLPFVHNTTIGRG 170
>gi|294085287|ref|YP_003552047.1| iron-sulfur protein [Candidatus Puniceispirillum marinum IMCC1322]
gi|292664862|gb|ADE39963.1| iron-sulfur protein [Candidatus Puniceispirillum marinum IMCC1322]
Length = 460
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 200 SLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCA 253
L +GP P + FWFP+ S ++ + + E V++R ++G G + C+
Sbjct: 33 ELTETGPRTPGGEYWRRFWFPICLSDEVTNRPLRKRILSEDLVVYRDQEGNCGLLHLHCS 92
Query: 254 HRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGM 308
HR L G V E ++C YHGW Y DG + P S VK + P E +G+
Sbjct: 93 HRNMSLEFGIVEERGLRCAYHGWLYDYDGTVIETPGEPKGSPICEKVKQGAYPVKEFKGL 152
Query: 309 IWIWPGDEPPTATIPCLLPPSGFEIHA-EIV---MELPIEHGLLLDNLLDLAHAPFTHT- 363
++ + G P A IP FE+ E+V + P + + +N +D H + HT
Sbjct: 153 VFAYMG---PMAEIPPFPIYDTFELDGHELVPYRLSYPCNYLQVAENTMDPIHTVYLHTL 209
Query: 364 ---STFAKGWSVPSLVKFLTPASGL 385
+ F + W + L+KF + L
Sbjct: 210 VGETQFEESWGITPLLKFHDSDTSL 234
>gi|408527957|emb|CCK26131.1| alpha-subunit oxygenase [Streptomyces davawensis JCM 4913]
Length = 356
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 55/286 (19%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SVN 265
+N W+ A+S ++ + EP V +R + DG + + C HR PL ++
Sbjct: 9 RNQWYVAAYSHEVGRELFGRRVLGEPLVFYRTEGDGTVIALNDRCVHRRYPLSEAPTRLD 68
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
R+ C YHG+ Y T G C +P + R +I S P EQ+ ++W+W GD P P
Sbjct: 69 GDRVVCGYHGFTYDTTGTCVYVPGQKRIPRTARIASYPVVEQDSLVWVWIGD--PDLADP 126
Query: 324 CLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------- 362
+P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 127 RSIPRARHLDSPGWVTVRG---MEPIACDYGLLVDNLLDLSHETYLHGGYIGTPEVAETP 183
Query: 363 -TSTFAKGWSVPSLVK---------FLTPASGLQG---YWDPYPIDMEFRPPCMVLSTIG 409
T+ +G + + + F ++G++G W D+E+ PC+ L
Sbjct: 184 ITTEVDEGAGIVRVSRHMDDAECPPFYAKSTGIEGRIMRWQ----DIEYHAPCLYLLHSR 239
Query: 410 ISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 454
++ G + E + H + PS + + +S D+A+
Sbjct: 240 VAPVGVVPEVDGSDPGGFHTEITYAITPSGDGEVYDFWAVSRDWAT 285
>gi|284928660|ref|YP_003421182.1| ring-hydroxylating dioxygenase, large terminal subunit
[cyanobacterium UCYN-A]
gi|284809119|gb|ADB94824.1| ring-hydroxylating dioxygenase, large terminal subunit
[cyanobacterium UCYN-A]
Length = 349
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 153/349 (43%), Gaps = 43/349 (12%)
Query: 212 TRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
T L+N W+ S DLK + EP +I R K+G +++ C HR PL GS+
Sbjct: 3 TLLRNCWYVAVSSKDLKPKKIIHKKILGEPILIGRKKNGQVFAMRDICPHRGIPLSYGSL 62
Query: 265 NEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW----- 312
++ I C YHGW+++T +GKC+++PS + +++ + PC E +G IWI+
Sbjct: 63 DQDDITCRYHGWKFNTNNGKCKEIPSLTKYDNLDVERIQVLTYPCEEVQGNIWIYFINTN 122
Query: 313 -----PGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST 365
D P TIP L P I + I+H ++ L+D AH P+ H +
Sbjct: 123 KSQSKSTDIPSVPTIPDFGKLSPG---ITETMQFSCNIDHAII--GLMDPAHGPYIHDAW 177
Query: 366 FAKGWSVPSLVKFLTPASGLQGY-WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 424
+ + VK QG+ Y + + RP ++ + I +L G T
Sbjct: 178 WWRSGPRKFRVKEKHYEPVSQGFRLVSYNMPVSARPYKILGKDVSIEIIFQLPGVRTEIL 237
Query: 425 ATHLHQ--LHVCLPSSRKKTRLLYR---MSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 479
+ L C+ + + +++ ++ +A+V K P + L R F L +D
Sbjct: 238 KGDRYSACLLTCITPIDEYSCEIFQSVYWTIPWAAVFK--PLLSLLTRQF----LAQDRD 291
Query: 480 LVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
++ QQE + ++ + + +RL ++ +PF+ P+
Sbjct: 292 AIIQQQEGLMYDPSLMLIDDADTQAKWYFRLKQEYQRSQENNIPFVNPL 340
>gi|297746464|emb|CBI16520.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 126/299 (42%), Gaps = 46/299 (15%)
Query: 250 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QLRNVKIKSL 300
+ CAHR PL G +++ GR+QC YHGW ++ G C+ +P + +
Sbjct: 168 DACAHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKARAAVY 227
Query: 301 PCFEQEGMIWIWPGDEPPTATI-----PCLLPPSGFEIHAEIV--MELPIEHGLLLDNLL 353
P Q G++W WP +P I P +P + + + + P + +L++N++
Sbjct: 228 PSAVQHGIVWFWPNTDPQFKDIFTKKRPPYIPELDDLSYTKSMGARDFPFGYEILMENVM 287
Query: 354 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDME-------FRPPCMVLS 406
D AH + H + P ++ S + G+ D E F PPC+ +
Sbjct: 288 DPAHVAYAHYGIADREGGTP--IEISVKRSAIDGF------DAERELARSKFIPPCLYYT 339
Query: 407 TIGI----SKPGKLEGQNTRQCATHLHQ-----LHVCLPSSRKKTRLLYRMSLDFASVLK 457
+ S G + ++H+ + +C+P S +RL++ +F
Sbjct: 340 CLDFPAYQSNESVSSGLTKEEPSSHMSPKRALLILICVPVSPGNSRLIWTFPRNFGLWTD 399
Query: 458 HVPFMQYLWRHFAEQVLNEDLRLV-LGQQERMNNGANVWN----LPVGYDKLGVRYRLW 511
H+ +++ +L+ DL L+ L +++ M G + W+ +P D V +R W
Sbjct: 400 HI-IPRWMLHMSQNLILDSDLYLLHLEERKIMKAGPSNWHKACFVPTKSDAHIVAFRAW 457
>gi|427718313|ref|YP_007066307.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Calothrix
sp. PCC 7507]
gi|427350749|gb|AFY33473.1| Rieske (2Fe-2S) iron-sulfur domain protein [Calothrix sp. PCC 7507]
Length = 351
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
N L+N W+ S +K M EP ++ R +DG +++ C HRA PL G
Sbjct: 6 NFLLRNIWYYALPSYQIKPGKMVSRTFLGEPVLLVRSQDGKVSALRDICPHRAVPLSCGR 65
Query: 264 VNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGD-- 315
+ ++C YHGW + G+C +PS T L +KS E +G IWI+ D
Sbjct: 66 FDGQEVECCYHGWRFDPAGRCTAIPSLVAGQETDLSRFNVKSYEIREAQGNIWIYMADPD 125
Query: 316 --EPPTA--TIPCLLPPSGFEIHAEI---VMELPIEHGLLLDNLLDLAHAPFTH 362
+PP + IP + +GFE + VM P + L+D AH+P+ H
Sbjct: 126 NPQPPDSEIEIPVI---AGFEERSPQLVEVMRFPCFVDHAVTGLMDPAHSPYVH 176
>gi|333908973|ref|YP_004482559.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
gi|333478979|gb|AEF55640.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
Length = 364
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 131/336 (38%), Gaps = 43/336 (12%)
Query: 212 TRLKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
T KN W+ A S ++ E +R D V + C HR L +G V
Sbjct: 5 TYPKNAWYVAAMSEEVAGSKPLGRKICGESIAFYRSHDDQIAAVLDFCPHRGAALSIGYV 64
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--AT 321
+G + C YHG + DGK + MP +++ +KS E+ G IW+WPG++ A
Sbjct: 65 EDGLLVCGYHGLKMGADGKTKSMPLQRVQGFPCMKSYAVEERYGFIWVWPGEQSKADRAL 124
Query: 322 IPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK--- 377
IP L E + + + ++ L++DNL+DL H + H S+ + S V
Sbjct: 125 IPHLEWADNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDESPVDTKV 184
Query: 378 ------------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 415
F A G D +D F PP V+ +G++ G
Sbjct: 185 DGDKVITSRFMENIMPPPFWQAALRGNGLADDVAVDRWQICRFSPPSHVMIDVGVAHAGH 244
Query: 416 --LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 473
E N + ++ + + P S + M+ +F K + R +
Sbjct: 245 GGFEASNDHKASSTV--VDFITPESDTSIWYFWGMARNFNPEDKA---LTDNIREGQGAI 299
Query: 474 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
EDL ++ QQE + + L + D GV+ R
Sbjct: 300 FAEDLEVLERQQENLLAFPDYDLLKLDIDAGGVQSR 335
>gi|329847866|ref|ZP_08262894.1| rieske 2Fe-2S domain protein [Asticcacaulis biprosthecum C19]
gi|328842929|gb|EGF92498.1| rieske 2Fe-2S domain protein [Asticcacaulis biprosthecum C19]
Length = 351
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 58/219 (26%)
Query: 176 DQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM--- 232
DQT S S ++++ +V G+ LK+ W+ A S DLK +
Sbjct: 3 DQTTTSASRAEKTERVVFGQ----------------GFLKDCWWFAALSGDLKPGKLQRF 46
Query: 233 ----EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEGR---IQCPYHGWEYSTDGKC 284
EP ++ R DG +++ C HRA PL G V +G +QCPYHGW ++T+G C
Sbjct: 47 VFLGEPVLLGRDLDGKVYGIRDICPHRAAPLSAGQMVRDGSACVVQCPYHGWTFNTEGTC 106
Query: 285 EKMPS------TQLRNVKIKSLPCFEQEGMIWIW----------PGDEPP-----TATIP 323
+PS + +K+++ EQ+G++WI+ P EPP P
Sbjct: 107 TSVPSLTPDQEMDVNRIKVRNYTVREQQGIVWIYITADARRPTEPDHEPPVLPGVVGGNP 166
Query: 324 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
++ F+ H I+H ++ L+D AH P+ H
Sbjct: 167 IIVETMDFDSH--------IDHAVV--GLMDPAHGPYVH 195
>gi|329114531|ref|ZP_08243290.1| Vanillate O-demethylase oxygenase subunit [Acetobacter pomorum
DM001]
gi|326696011|gb|EGE47693.1| Vanillate O-demethylase oxygenase subunit [Acetobacter pomorum
DM001]
Length = 372
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 22/159 (13%)
Query: 176 DQTCAS-PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-- 232
DQT + ST +++ KGK+ + + S P ++W+PVA+S +LK
Sbjct: 2 DQTAQTDSSTPALAVEARKGKIDLRRVR-SNP---------DYWYPVAWSRELKPGKTIG 51
Query: 233 -----EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM 287
P + R +G +++ CAHR PL G+V ++C YHGW Y G+C +
Sbjct: 52 TRYAGMPIALVRPDEGPVFALEDRCAHRQVPLSKGTVEGASVKCCYHGWAYGRSGRCIDV 111
Query: 288 P---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
P +L N +++ PC EQ+GMI+++PGD T+P
Sbjct: 112 PYLGKGKLPN-GVRTFPCREQDGMIFVFPGDPEKADTVP 149
>gi|126656429|ref|ZP_01727690.1| hypothetical protein CY0110_22037 [Cyanothece sp. CCY0110]
gi|126622115|gb|EAZ92822.1| hypothetical protein CY0110_22037 [Cyanothece sp. CCY0110]
Length = 466
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 135/343 (39%), Gaps = 41/343 (11%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCV-QNTC 252
+ G P K W+PV + DL D +P VI+ K CV + C
Sbjct: 15 IIGGNDPDQFDWKEVWYPVHYIEDL--DKTKPTSFTLLEKNIVIWWDKKNSQWCVFDDQC 72
Query: 253 AHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFE 304
HR PL G +NE G ++CPYHGW +S G CE +P + Q + +
Sbjct: 73 PHRLAPLSEGRINESGCLECPYHGWAFSGQGNCEVIPQQKPEGNAEQSPRASVNTYSTKV 132
Query: 305 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVM-----ELPIEHGLLLDNLLDLAHAP 359
+G+++++ G A P L E E V ++P + L++N+LD +H P
Sbjct: 133 AQGLLFVYAGKTENAAKTPIPLVDVLEESSREWVCLNTFRDIPYDALTLMENVLDSSHIP 192
Query: 360 FTHTSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE 417
+TH + +V P ++ + G +G W+ P R + T PG +
Sbjct: 193 YTHHKSVGNRSNVSPVDLEVVESGKWGFKGVWEEGP-----RKGTLGKQTTHFFAPGMMY 247
Query: 418 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLN 475
T + + P S+ K RL R F S + + + H + +
Sbjct: 248 HDLTSKQFGRTLTVVYATPISKGKCRLFARFPFKFCSPIPKFFINLTPRWYSHIGQNGVL 307
Query: 476 EDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
ED ++ L QER +N + + LP D + W
Sbjct: 308 EDDQIFLHYQERYLEKKGGSSNVSKAFYLPTKADLFVFQLHSW 350
>gi|188989719|ref|YP_001901729.1| oxygenase subunit [Xanthomonas campestris pv. campestris str. B100]
gi|167731479|emb|CAP49654.1| oxygenase subunit [Xanthomonas campestris pv. campestris]
Length = 350
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 134/334 (40%), Gaps = 55/334 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVN 265
RL W VA S+++ + EP V++R G + + ++ C HR PL +GS +
Sbjct: 21 RLAQHWHAVALSSEVSEAPFKAMLLDEPLVLYRLGAELV--AARDVCPHRGVPLSMGSAD 78
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 321
+ C YHG + + G+C +P++ +N+ ++ + E+ G+IW+ +
Sbjct: 79 GAGVVCAYHGLRFGSGGRCNHIPASPNQNIPAKMRLHTYAVAERYGLIWVCLAKPAGVSA 138
Query: 322 IPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWSVP 373
+PP GF+ ++ L+ +D+AH F HT+TFA+ VP
Sbjct: 139 AEVQIPPMPGWDEDGFQQIVCPGFDIAGSAARQLEGFIDVAHFAFVHTATFAQPDKREVP 198
Query: 374 SLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKPGK 415
+ TP Y Y +DM E P TI PGK
Sbjct: 199 AYTTTETPTGFNADYLSSVANYSVDMPLPDVDPGFQWLRHFEVHLPFTATLTIHFPVPGK 258
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
L ++ P S+ KTRLL ++ +F + H+P F +V
Sbjct: 259 -----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLRVFE 302
Query: 476 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
ED +V Q+ + + + D+ + YR
Sbjct: 303 EDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|384429766|ref|YP_005639127.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. raphani 756C]
gi|341938870|gb|AEL09009.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. raphani 756C]
Length = 358
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 25/171 (14%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEVKH-ALTPRKLCNLDVVLYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+ G+C MPS + N ++ P E+ +W+WPGD + A IP
Sbjct: 70 VVCGYHGLVYNAQGRCVHMPSQETINPSACVRGFPVAEKHRYVWVWPGDPAQADVALIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|161522387|ref|YP_001585316.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189348737|ref|YP_001941933.1| putative ring-hydroxylating dioxygenase large terminal subunit
[Burkholderia multivorans ATCC 17616]
gi|160345940|gb|ABX19024.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans ATCC
17616]
gi|189338875|dbj|BAG47943.1| putative ring-hydroxylating dioxygenase large terminal subunit
[Burkholderia multivorans ATCC 17616]
Length = 370
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------- 232
A P +L+ G L R V P+ P ++W+P+A+S +LK
Sbjct: 3 AVPLPDSNTLEPASGALVRDLRRV--PIHP------DYWYPLAWSRELKRGKTLGVRFAG 54
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYS-TDGKCEKMPSTQ 291
EP V+ R + G +++ CAHR PLH G V ++C YHGW Y + G+C +P
Sbjct: 55 EPIVLVRTESGAVYALEDRCAHRQVPLHAGVVAGETLRCCYHGWTYDCSSGRCVDVPYLG 114
Query: 292 LRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS----GFEIHAEIVMELPIEH 345
+ +++ PC E G+I+++PGD P L S G++ E+ +
Sbjct: 115 RERLPNGVRAYPCREAHGLIFVFPGDATRADERPFPLLASADDRGYKTR-RFGREVKCHY 173
Query: 346 GLLLDNLLDLAHAPFTHTSTFAK 368
+ +NL+D+ H F H +
Sbjct: 174 SFMHENLMDMNHQ-FLHRKQMGQ 195
>gi|83955042|ref|ZP_00963698.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. NAS-14.1]
gi|83840371|gb|EAP79544.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. NAS-14.1]
Length = 355
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 106/266 (39%), Gaps = 42/266 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ +STD D+ + + V +R DG +++ C HR PL G
Sbjct: 4 VRNAWYVAGWSTDFGDELVPLTLLAQNLVAYRTSDGQIAVLEDRCPHRLLPLSKGKRIGD 63
Query: 268 RIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPGD----EPPTAT 321
IQC YHG + DG C ++P S ++ + S P E+ +++IW GD +P A
Sbjct: 64 TIQCGYHGMTFGADGACVRVPGQSNLPKSAYVDSYPVLERHDIVFIWMGDADKADPALAF 123
Query: 322 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK-- 377
L G+ +H + + + + +NL+D AH F H +T S VP VK
Sbjct: 124 DLPELGQEGWHVHHGDKLHIRANYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVKTA 183
Query: 378 -----------------FLTPASGLQG---YWDPYPIDMEFRPPCMVLSTIGISKPGKLE 417
F G G W Y + M P + G S KLE
Sbjct: 184 DEVIVAWRWIRDAEPIGFFKAFGGFSGNVDRWHYYYLHM----PSTAVIDFG-SSDAKLE 238
Query: 418 -GQNTRQCATHLHQLHVCLPSSRKKT 442
++ R + LH P + T
Sbjct: 239 LPEDQRNKGVRIFALHFVTPVTEDYT 264
>gi|91782296|ref|YP_557502.1| aromatic acid dioxygenase alpha subunit [Burkholderia xenovorans
LB400]
gi|91686250|gb|ABE29450.1| phthalate 4,5-dioxygenase, oxygenase subunit [Burkholderia
xenovorans LB400]
Length = 440
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 24/185 (12%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTM--------EPWVIFRGKDGIPGCVQNTCAHRA 256
GP P ++ FW P S+DL D E + FR +G G V + C HR
Sbjct: 14 GPGTPTGQFMRLFWLPFLPSSDLSVDGQPQRVRLLGEDLLAFRDSEGRVGLVDHACPHRG 73
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIWI 311
PL G ++C YHGW++ DG+ + P+ + + V+IKS PC E+ G++W
Sbjct: 74 APLVFGRNENSGLRCVYHGWQFGVDGRVIETPAEPIESRLKEKVRIKSYPCRERNGIVWT 133
Query: 312 WPGDE-----PPTATIPCLLPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTS 364
+ GD PP + + P +H ++ E L ++ +D AHAP H
Sbjct: 134 YMGDASADGLPPLPNLEWNMVPVE-NVHFSFRVQ---ECNWLQAVEGEIDSAHAPILHGR 189
Query: 365 TFAKG 369
++G
Sbjct: 190 IDSQG 194
>gi|21229841|ref|NP_635758.1| vanillate O-demethylase oxygenase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66766718|ref|YP_241480.1| vanillate O-demethylase oxygenase [Xanthomonas campestris pv.
campestris str. 8004]
gi|21111340|gb|AAM39682.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66572050|gb|AAY47460.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. campestris str. 8004]
Length = 358
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 25/171 (14%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEVKH-ALTPRKLCNLDVVLYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+ G+C MPS + N ++ P E+ +W+WPGD + A IP
Sbjct: 70 VVCGYHGLVYNAQGRCVHMPSQETINPSACVRGFPVAEKHRYVWVWPGDPAQADVALIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|148557174|ref|YP_001264756.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148502364|gb|ABQ70618.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 362
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--R 293
V++R + G + + C HR PL G + R++C YHG+E+ DG+C +PS +
Sbjct: 49 VLYRTEAGEVAALPDRCPHRFMPLSQGWLIGDRLRCAYHGFEFGPDGRCAHIPSQGVVPG 108
Query: 294 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS----GFEIHAEIVMELPIEHGLLL 349
++I+ P E +WIWPGD P P LLPP G++ + L
Sbjct: 109 TMRIRPYPVVEHGLWVWIWPGD--PELADPALLPPDYSRPGYDSFVHFQASVKCHFLKLQ 166
Query: 350 DNLLDLAHAPFTHTSTFAKG 369
+NLLD H F H F G
Sbjct: 167 ENLLDSTHPTFLHEGMFDDG 186
>gi|16330378|ref|NP_441106.1| hypothetical protein slr1747 [Synechocystis sp. PCC 6803]
gi|383322119|ref|YP_005382972.1| hypothetical protein SYNGTI_1210 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325288|ref|YP_005386141.1| hypothetical protein SYNPCCP_1209 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491172|ref|YP_005408848.1| hypothetical protein SYNPCCN_1209 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436439|ref|YP_005651163.1| hypothetical protein SYNGTS_1210 [Synechocystis sp. PCC 6803]
gi|451814536|ref|YP_007450988.1| hypothetical protein MYO_112210 [Synechocystis sp. PCC 6803]
gi|1652868|dbj|BAA17786.1| slr1747 [Synechocystis sp. PCC 6803]
gi|339273471|dbj|BAK49958.1| hypothetical protein SYNGTS_1210 [Synechocystis sp. PCC 6803]
gi|359271438|dbj|BAL28957.1| hypothetical protein SYNGTI_1210 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274608|dbj|BAL32126.1| hypothetical protein SYNPCCN_1209 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277778|dbj|BAL35295.1| hypothetical protein SYNPCCP_1209 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407958298|dbj|BAM51538.1| hypothetical protein BEST7613_2607 [Synechocystis sp. PCC 6803]
gi|451780505|gb|AGF51474.1| hypothetical protein MYO_112210 [Synechocystis sp. PCC 6803]
Length = 469
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 123/303 (40%), Gaps = 32/303 (10%)
Query: 215 KNFWFPVAFSTDLKDDTMEPWVIFRGKDGIPGCVQNT---------CAHRACPLHLGSVN 265
+ W+P+A+ DL D G+D + N+ C HR PL G +N
Sbjct: 31 RAVWYPLAYEEDL-DKRKPTRFTLLGEDLVIWWEANSQQWRVYADQCPHRLAPLSEGRIN 89
Query: 266 E-GRIQCPYHGWEYSTDGKCEKMPSTQL-------RNVKIKSLPCFEQEGMIWIWPG--D 315
+ G+++CPYHGW ++ G+C+ +P + ++SLP +G+++ +PG D
Sbjct: 90 KAGQLECPYHGWTFAGSGQCQAIPQQHTGGQAHTSKRACVRSLPTQVAQGLLFAFPGETD 149
Query: 316 EPPTATIPCLLPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 372
+ +P + G + + +LP + L++N+LD +H P+TH T K +V
Sbjct: 150 QAEKVALPLVDVLDGDQSEWVCLNTFRDLPYDAFTLMENVLDSSHIPYTHHKTVGKRSNV 209
Query: 373 P--SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 430
L G G W+ P R + T PG + T +
Sbjct: 210 SPVDLEIIHGDRQGFTGIWEEGP-----RKGTLGKQTTTFIAPGLMWHDLTSKQFGRTLT 264
Query: 431 LHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLVLGQQERM 488
+ P + RL R F S + F + H + + ED ++ L QER
Sbjct: 265 VVYATPIRPGECRLFARFPFKFPSKFPRLVIGFTPRWYSHLGQNRVLEDDQIFLHFQERF 324
Query: 489 NNG 491
G
Sbjct: 325 VQG 327
>gi|298709173|emb|CBJ31116.1| Pheophorbide a oxygenase, putative chloroplast precursor
[Ectocarpus siliculosus]
Length = 532
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 86/195 (44%), Gaps = 36/195 (18%)
Query: 204 SGPVQPYNTRLKNF-----WFPVAFSTDL--KDDTM--------EPWVIFRG-KDGIPGC 247
SG P ++ F W+PVA DL +D M E V+++ KDG
Sbjct: 27 SGSAAPDTSKQAGFQWRRQWYPVAVMRDLEARDPRMPYPVQLMGEGLVVWKDPKDGGWKA 86
Query: 248 VQNTCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMPST------QLRNVK--- 296
+ C HR PL G V++ GR+QC YHGWE+ DGKC +P +N K
Sbjct: 87 FADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEGDGKCGSIPQATPGSRETAQNSKRAC 146
Query: 297 IKSLPCFEQEGMIWIWPGDEP---------PTATIPCLLPPSGFEIHAEIVMELPIEHGL 347
++P EG +W+WP P P AT+P L SG +L
Sbjct: 147 ATAIPTKVVEGKLWLWPDPSPEGVKESETVPPATVPGLDFGSGDFGGNWYCRKLAYGFDT 206
Query: 348 LLDNLLDLAHAPFTH 362
L++NL D AH PF H
Sbjct: 207 LIENLADPAHVPFAH 221
>gi|89056443|ref|YP_511894.1| Rieske (2Fe-2S) protein [Jannaschia sp. CCS1]
gi|88865992|gb|ABD56869.1| vanillate demethylase subunit A [Jannaschia sp. CCS1]
Length = 340
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTMEPW-------VIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LKN W+ A+S ++ D T++P V++R +DG P +++ C HR PL G++
Sbjct: 3 LKNCWYVAAWSHEI-DRTLQPQTFLGENVVLYRKQDGTPVALEDACPHRKLPLSDGALQG 61
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQ---LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
++C YHG + G C P+ + + +KS P ++ WIW GD P A
Sbjct: 62 DTVECGYHGLTFDCAGACVAAPTQKDAIPKRATVKSYPVVDRYRFTWIWMGD-PAEADPD 120
Query: 324 CLLPPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
+ P F+ V+++ + ++DNLLD +H + H ++FA G
Sbjct: 121 LIFPIPNFDDPTWGKTDGGVLDIDCNYLWVVDNLLDPSHVAWVHVTSFAGG 171
>gi|114050057|emb|CAK51082.1| putative vanillate O-demethylase oxygenase subunit A [Streptomyces
ambofaciens]
Length = 362
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 59/299 (19%)
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
P ++R +G + + C HR PL G + +QCPYHG Y+ G+C MP+ +
Sbjct: 52 PLALWRTTEGRAIALADACWHRLAPLSKGRILGDELQCPYHGLRYNATGRCTGMPAQETI 111
Query: 294 N--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP-----------SGFEIHAEIVME 340
N + S P E+ +W+W GD P P +P G IHA+
Sbjct: 112 NPSAVVPSYPVVERYRYVWVWVGD--PDLADPATVPDMHQMDDPTWAGDGETIHAD---- 165
Query: 341 LPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------GWSVPSLVKFL----TPAS 383
+ L+LDNL+DL H F H+S+ + G +V ++ +++ P
Sbjct: 166 --CNYQLILDNLMDLTHEEFVHSSSIGQEELSEAEFDVTHEGNTV-TVTRWMRDIDAPPF 222
Query: 384 GLQGYWDPYP-----ID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVC 434
L+ D +P +D + F P + +G++K G + R + + ++
Sbjct: 223 WLKNMRDKFPGFSGKVDRWQIITFEAPGTIRIDVGVAKAGTGAPEGDRTQGVNGYVMNTI 282
Query: 435 LPSSRKKTRLLY----RMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 489
P + + + + LD ++ + R V ED ++ QQ ++
Sbjct: 283 TPETDRTSHYFWAFMRNYRLDSQTITTQL-------RQAVHGVFGEDEEMLCAQQRAID 334
>gi|399017736|ref|ZP_10719925.1| Rieske (2Fe-2S) domain-containing protein [Herbaspirillum sp.
CF444]
gi|398102503|gb|EJL92683.1| Rieske (2Fe-2S) domain-containing protein [Herbaspirillum sp.
CF444]
Length = 366
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+++ W+ A S ++ D +E +++R DG P +QN CAHR+ PL G ++
Sbjct: 19 IRDCWYVAALSGEVTRDLLERTLLGKTVLMYRKLDGTPVVMQNRCAHRSFPLSKGRLDGD 78
Query: 268 RIQCPYHGWEYSTDGKCEKMPS--TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
++ C YHG Y+ +G+C MPS + +I S P E+ +IWIW GD P L
Sbjct: 79 QVVCGYHGMAYNPEGQCVHMPSLANPPTHARIASYPVQERGPLIWIWMGDA--AKADPAL 136
Query: 326 LPPSGFEIHAEIV-----MELPIEHGLLLDNLLDLAHAPFTHTST 365
+P + + E + + + +NLLD H P H T
Sbjct: 137 IPDTSWLDAPEWTTVTGYFHMKSNYVAMHENLLDQTHFPILHADT 181
>gi|410686729|ref|YP_006963032.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
pickettii]
gi|388482580|gb|AFK33102.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
pickettii]
gi|403398307|gb|AFR43891.1| putative vanillate O-demethylase oxygenase chain A [uncultured
bacterium]
Length = 358
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 19/167 (11%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KNFW+ A ++ + +P V FR +G + + C+HR L LG +
Sbjct: 4 KNFWYVGAMKHEVGRQLLARTLLEQPVVFFRRNEGSVAALADRCSHRRVSLSLGRLIGDE 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QC YHG ++ DG C +P Q R + ++S P E++G +WIWPGD P L
Sbjct: 64 VQCGYHGLTFAGDGSCTSIPG-QSRVPPSACVRSYPVVERDGFVWIWPGD--PALANETL 120
Query: 326 LPPSGFEIHAEIVMELPIEHGLL-------LDNLLDLAHAPFTHTST 365
+P + + P E L+ ++N+LDL+H + H T
Sbjct: 121 VPDYAEICSSGRYVGRPAEALLVEAPFLFNIENVLDLSHVTYAHPET 167
>gi|384429827|ref|YP_005639188.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. raphani 756C]
gi|341938931|gb|AEL09070.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. raphani 756C]
Length = 350
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 134/334 (40%), Gaps = 55/334 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVN 265
RL W VA S+++ + EP V++R G + + ++ C HR PL +GS +
Sbjct: 21 RLAQHWHAVALSSEVSEAPFKATLLDEPLVLYRLGAELV--AARDVCPHRGVPLSMGSAD 78
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 321
+ C YHG + + G+C +P++ +N+ ++ + E+ G+IW+ +
Sbjct: 79 GAGVVCAYHGLRFGSGGRCNHIPASPNQNIPAKMRLHTYAVAERYGLIWVCLAKPAGVSA 138
Query: 322 IPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWSVP 373
+PP GF+ ++ L+ +D+AH F HT+TFA+ VP
Sbjct: 139 AEVQIPPMPGWDEDGFQQIVCPGFDIAGSAARQLEGFIDVAHFAFVHTATFAQPDKREVP 198
Query: 374 SLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKPGK 415
+ TP Y Y +DM E P TI PGK
Sbjct: 199 AYTTTETPTGFNADYLSSVANYSVDMPLPDVDPGFQWLRHFEVHLPFTATLTIHFPVPGK 258
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
L ++ P S+ KTRLL ++ +F + H+P F +V
Sbjct: 259 -----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLRVFE 302
Query: 476 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
ED +V Q+ + + + D+ + YR
Sbjct: 303 EDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|329119536|ref|ZP_08248221.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
bacilliformis ATCC BAA-1200]
gi|327464469|gb|EGF10769.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
bacilliformis ATCC BAA-1200]
Length = 346
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 130/336 (38%), Gaps = 24/336 (7%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRA 256
++ P QP L N+W+ A D++ + +F G + + C HR
Sbjct: 1 MTTPEQPAADGLHNYWYITAREKDVRKKPQAVRLFGRHYAVFHQGGGRYAALVDCCPHRN 60
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW 312
PL +G V G ++C YHGW + DG+ ++P+ +V++ ++ C Q+G +W+
Sbjct: 61 VPLSIGKVENGCLKCAYHGWSFDGDGRLAEIPALCGCGGTPDVRVPAVHCTAQDGYVWLC 120
Query: 313 PGDEPPTATIP--CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 370
G A +P CL + P++ L+N LD HA + H S F
Sbjct: 121 IGTPATPAPLPFACLDEAGYTTFRMKTRFAAPVD--WCLENFLDCPHAVYVHNSWFRTPT 178
Query: 371 SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC------ 424
P A G Q + P + + S +S + T +
Sbjct: 179 GKPVRALLRRNADGAQIEYANEPREKSLVWKLLQNSDTEMSHTDRFIAPATSRVDYRFSD 238
Query: 425 ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ 484
H C P + T + +S F + P ++ +++ ++ ++ +D+ ++ Q
Sbjct: 239 GKHYIVTSSCTPLDKDTTEVHTVVSYKFGRL---NPLIRLVFQPLSQLIIRQDVAMMKQQ 295
Query: 485 QERMNN-GANVWNLPVGYDKLGVRYRLWRDALEKGA 519
++ ++ G D L WR L +G
Sbjct: 296 RDNIDRFGGRARFCNSAADLLMPEITAWRKTLAEGG 331
>gi|170722290|ref|YP_001749978.1| vanillate monooxygenase [Pseudomonas putida W619]
gi|169760293|gb|ACA73609.1| Vanillate monooxygenase [Pseudomonas putida W619]
Length = 358
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 206 PVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPL 259
P +P L N W+ A +LKD + + V+FR DG ++N C HRA PL
Sbjct: 15 PAKPSTFPL-NQWYVAALGWELKDRPVGRTLLNKSVVMFRTADGKVAALENRCCHRALPL 73
Query: 260 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEP 317
G++ G ++C YHG ++ +GKC ++P K+ + E++ ++WIW
Sbjct: 74 SDGTLEAGGLRCGYHGLLFNDEGKCIEIPGQDKIPSKAKVAAFHVVEKDQIVWIWFAS-- 131
Query: 318 PTATIPCLLPPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 370
P P PPS ++IH+ V + L+ DNL+DL+H + H T
Sbjct: 132 PEHPEPTTEPPS-YDIHSSGDYLFDGDVYHYDAPYQLIHDNLMDLSHLGYVHLRTIGGNA 190
Query: 371 SV 372
S+
Sbjct: 191 SI 192
>gi|226505578|ref|NP_001147604.1| LOC100281213 [Zea mays]
gi|195612454|gb|ACG28057.1| pheophorbide a oxygenase [Zea mays]
Length = 525
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 126/300 (42%), Gaps = 50/300 (16%)
Query: 250 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQL--------RNVKIKSL 300
+ C HR PL G +++ GR+QC YHGW + G C+ +P + S
Sbjct: 122 DACPHRLAPLSEGRIDDRGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSSRACVASY 181
Query: 301 PCFEQEGMIWIWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLDN 351
PC Q ++W +P +P + + P L+P P ++ + +LP + +L++N
Sbjct: 182 PCVVQNNILWFYPRADPEHSDVLQRKRPPLIPEIDDPDFVTVYG--IRDLPYGYDILVEN 239
Query: 352 LLDLAHAPFTHTST--------------FAKGWSVPSLVKFLTPASGLQGYWDPYPID-M 396
L+D AH P+ H + K P VK + ++G+ P
Sbjct: 240 LMDPAHVPYAHKGIMRGIRKKEDPGRVDYDKEGGGP--VKMKIEQANIEGFVSPQERGYF 297
Query: 397 EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVL 456
+F PC T P EGQ + A + + C+P ++R+++ + L
Sbjct: 298 QFVAPCTFFGT-----PFVQEGQKKK--APRVMLVFFCIPVGPGRSRVIWAFPRNVGVWL 350
Query: 457 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQER-----MNNGANVWNLPVGYDKLGVRYRLW 511
H+ ++L+ +L+ D+ L+ ++ + ++N +P D + V +R W
Sbjct: 351 HHIT-PRWLYHVGQNLILDSDIFLLHVEERKFAAAGLDNWQRACYVPTSSDAMVVAFRNW 409
>gi|374316567|ref|YP_005062995.1| ring-hydroxylating dioxygenase, large terminal subunit
[Sphaerochaeta pleomorpha str. Grapes]
gi|359352211|gb|AEV29985.1| ring-hydroxylating dioxygenase, large terminal subunit
[Sphaerochaeta pleomorpha str. Grapes]
Length = 322
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST----- 290
V+FR +G GCV + C HR L G + ++CP+HG E+ T+G C ++P+
Sbjct: 31 VLFRDAEGKLGCVVDQCPHRGAALSAGKLAGSHVRCPFHGLEFDTEGNCRRIPANGNASK 90
Query: 291 -QLRNVKIKSLPCFEQEGMIWIWPGD-EPPTATIPCLLP--PSGFEIHAEIVMELPIEHG 346
+ +K P E G+I++W G+ E TA++P + F ++E +
Sbjct: 91 EDISRYNVKQYPVQELMGIIYLWFGESEKATASVPFFHDQIDNSFS-YSEFPDHWNAHYS 149
Query: 347 LLLDNLLDLAHAPFTHTSTFAKG 369
++N LD+ H P H +T KG
Sbjct: 150 RCIENQLDVVHVPIVHYNTIGKG 172
>gi|159036240|ref|YP_001535493.1| phthalate 4,5-dioxygenase [Salinispora arenicola CNS-205]
gi|157915075|gb|ABV96502.1| Phthalate 4,5-dioxygenase [Salinispora arenicola CNS-205]
Length = 406
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 85/202 (42%), Gaps = 26/202 (12%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQNT 251
L GP P L+ +W PV S L + P +V+FR DG GC
Sbjct: 10 LTRVGPGTPMGRLLREYWMPVMRSGRLTEPGGAPMAVELLGEKFVVFRADDGTLGCFAEA 69
Query: 252 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR------NVKIKSLPCFEQ 305
C HR L L + ++C YHGW++S G+ + PS VK++ P E
Sbjct: 70 CPHRGASLTLARNEDCALRCIYHGWKFSVTGQVLETPSEPAELTRFASRVKLRHHPVIES 129
Query: 306 EGMIWIWPGD------EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 359
G+IW+W G PP T L P F + A V+E GL D +D AH
Sbjct: 130 GGVIWVWIGGTGRSAPAPPAFTFTKLPPEQVFGLVA--VVECNWLQGLEAD--IDSAHVS 185
Query: 360 FTHTSTFAKGWSVPSLVKFLTP 381
H T A+ ++ L+ TP
Sbjct: 186 LLH-ETEARAGALRDLLDDRTP 206
>gi|405351774|ref|ZP_11023192.1| Phenylpropionate dioxygenase [Chondromyces apiculatus DSM 436]
gi|397093075|gb|EJJ23807.1| Phenylpropionate dioxygenase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 393
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 31/186 (16%)
Query: 214 LKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
LK++W+ ST+L+ V+FR G P +++ C HR L G+V +
Sbjct: 32 LKDYWYVACLSTELRPGKPLARTLFGTGLVLFRDAQGQPTALRDRCLHRNARLSRGAVFD 91
Query: 267 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNV----------------KIKSLPCFE 304
GRI CPYHGW Y G ++PS ++L N ++ P E
Sbjct: 92 GRIGCPYHGWVYDASGAVVEVPSLGPSQRSELLNAEACAREGLKPEPCALGRVSRFPAVE 151
Query: 305 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGL--LLDNLLDLAHAPFTH 362
Q+G+++++ G + P P +P G + M +G+ L++N +D+ H F H
Sbjct: 152 QDGLVFVYMGGDAPARAAPFRVPHWGQDGWTVYFMVTRFPNGVTNLVENFMDVPHTLFVH 211
Query: 363 TSTFAK 368
F K
Sbjct: 212 PGWFRK 217
>gi|91786893|ref|YP_547845.1| Rieske (2Fe-2S) domain-containing protein [Polaromonas sp. JS666]
gi|91696118|gb|ABE42947.1| Rieske (2Fe-2S) region [Polaromonas sp. JS666]
Length = 350
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR-- 293
V +R +DG +Q+ C HR PLHLG + I+C YHG + GKC K P +
Sbjct: 24 VFYRKEDGTAVALQDRCPHRFIPLHLGKIVGDSIECAYHGLTFDCSGKCVKNPHGDGKVP 83
Query: 294 -NVKIKSLPCFEQEGMIWIWPGDEPPT-ATIP---CLLPPSGFEIHAEIVMELPIEHGLL 348
+++S P E+ GM+WIW G + TIP L +GF + + + + L+
Sbjct: 84 AAARVRSYPVAEKHGMLWIWMGSQAADPVTIPDYSVLESEAGFAT-SRGYLHIEANYELM 142
Query: 349 LDNLLDLAHAPFTH 362
+NLLDL+H + H
Sbjct: 143 GENLLDLSHITYLH 156
>gi|395004285|ref|ZP_10388352.1| ring-hydroxylating dioxygenase, large terminal subunit [Acidovorax
sp. CF316]
gi|394317811|gb|EJE54304.1| ring-hydroxylating dioxygenase, large terminal subunit [Acidovorax
sp. CF316]
Length = 343
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ D + E V +R + + C HR PL LG V +G+
Sbjct: 4 KNAWYVACTPDEIADKPLGRTICGEKMVFYRPAPDQVAALDDFCPHRGAPLSLGKVCDGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPCL 325
+ C YHG DGK MP +++ + ++ P E+ G IW+WPGD + A I L
Sbjct: 64 LMCGYHGLRVGCDGKAVSMPGQRVQGFPRTRNFPAVERYGFIWVWPGDAAQADPAKIHHL 123
Query: 326 LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW--SVPSLVK----- 377
E + + + ++ L++DNL+DL H + H+++ + VP +
Sbjct: 124 AWAESPEWAYGGGLYHIACDYRLMVDNLMDLTHETYVHSNSIGQKEIDEVPCKTRVEGDE 183
Query: 378 --------------FLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 414
F A + G D P+D F PP VL +G++ G
Sbjct: 184 VITSRFMENIQAPPFWQMALRMNGLPDDQPVDRWQVCHFTPPSHVLIEVGVALAG 238
>gi|414873470|tpg|DAA52027.1| TPA: putative pheophorbide a oxygenase [Zea mays]
Length = 525
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 126/300 (42%), Gaps = 50/300 (16%)
Query: 250 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQL--------RNVKIKSL 300
+ C HR PL G +++ GR+QC YHGW + G C+ +P + S
Sbjct: 122 DACPHRLAPLSEGRIDDRGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSSRACVASY 181
Query: 301 PCFEQEGMIWIWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLDN 351
PC Q ++W +P +P + + P L+P P ++ + +LP + +L++N
Sbjct: 182 PCVVQNNILWFYPRADPEHSDVLQRKRPPLIPEIDDPDFVTVYG--IRDLPYGYDILVEN 239
Query: 352 LLDLAHAPFTHTST--------------FAKGWSVPSLVKFLTPASGLQGYWDPYPID-M 396
L+D AH P+ H + K P VK + ++G+ P
Sbjct: 240 LMDPAHVPYAHKGIMRGIRKKEDPGRVDYDKEGGGP--VKMKIEQANIEGFVSPQERGYF 297
Query: 397 EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVL 456
+F PC T P EGQ + A + + C+P ++R+++ + L
Sbjct: 298 QFVAPCTFFGT-----PFVQEGQKKK--APRVMLVFFCIPVGPGRSRVIWAFPRNVGVWL 350
Query: 457 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQER-----MNNGANVWNLPVGYDKLGVRYRLW 511
H+ ++L+ +L+ D+ L+ ++ + ++N +P D + V +R W
Sbjct: 351 HHIT-PRWLYHVGQNLILDSDIFLLHVEERKFAAAGLDNWQRACYVPTSSDAMVVAFRNW 409
>gi|374984177|ref|YP_004959672.1| putative dioxygenase [Streptomyces bingchenggensis BCW-1]
gi|297154829|gb|ADI04541.1| putative dioxygenase [Streptomyces bingchenggensis BCW-1]
Length = 450
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWV----------IFRGKDGIPGCV 248
K L +GP P ++ +W P+A S +L D + P V +FR G G V
Sbjct: 7 KRLTRTGPGTPAGEWMRRYWQPIALSEEL--DGIRPLVAPKVMGQDLVLFRDDGGRLGLV 64
Query: 249 QNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCF 303
C HR L LG + +G ++C +HGW + DG C P ST V + S P
Sbjct: 65 DRGCPHRGADLSLGRLEDGGLRCCFHGWLFGRDGSCLDTPAEPVGSTLASRVTLGSYPVR 124
Query: 304 EQEGMIW--IWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 361
E+ G+IW + PG+ P + C P+ + ++E L + +D AHA +
Sbjct: 125 ERNGIIWGYLGPGEPPELPALDCFRAPADRAFAWKGLLECNWLQALEVG--IDPAHASYL 182
Query: 362 H 362
H
Sbjct: 183 H 183
>gi|292490010|ref|YP_003532902.1| vanillate O-demethylase oxygenase [Erwinia amylovora CFBP1430]
gi|292901031|ref|YP_003540400.1| (2Fe-2S)-binding protein [Erwinia amylovora ATCC 49946]
gi|428786997|ref|ZP_19004473.1| putative vanillate O-demethylase oxygenase subunit [Erwinia
amylovora ACW56400]
gi|291200879|emb|CBJ48014.1| putative (2Fe-2S) protein [Erwinia amylovora ATCC 49946]
gi|291555449|emb|CBA23914.1| putative vanillate O-demethylase oxygenase subunit [Erwinia
amylovora CFBP1430]
gi|426274464|gb|EKV52206.1| putative vanillate O-demethylase oxygenase subunit [Erwinia
amylovora ACW56400]
Length = 344
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 129/302 (42%), Gaps = 37/302 (12%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL +W PVA + D+ + EP VI+R DG ++ C HR PL LG ++
Sbjct: 20 RLAGYWHPVALAADIGQAPVKAVLLDEPLVIYR-IDGQVVVARDVCPHRGVPLTLGFHDQ 78
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEPP 318
I CPYHG + G+C ++PS+ + + K + E+ G+IW+ G PP
Sbjct: 79 AGIICPYHGLRFGEGGRCNRIPSSPEQAIPAKLHLLTYASEERYGLIWVCLAAAEGAVPP 138
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF--AKGWSVPSLV 376
+P +GF+ ++ G ++ LD+AH + HT TF A+ +VP
Sbjct: 139 LPVMPH-WEDAGFQQIVCPHFDVAGFAGRQVEGFLDVAHFAWIHTETFADAENQAVPPYN 197
Query: 377 KFLTPASGLQGYWDP---YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ--- 430
TP YW Y D E + P + ++ T H Q
Sbjct: 198 PVETPYGFSVDYWSSVSNYSADSERQAP----EGFQWLRHFEMHLPFTATLTIHFPQQEK 253
Query: 431 ---LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ-E 486
++ P S +KTRL ++ +F H+P + F +V ED +V Q+ E
Sbjct: 254 LVIMNAASPVSARKTRLFAPIARNFD---LHIPPEEV--HAFNHRVFEEDRLMVESQRPE 308
Query: 487 RM 488
R+
Sbjct: 309 RL 310
>gi|427707380|ref|YP_007049757.1| Pheophorbide a oxygenase [Nostoc sp. PCC 7107]
gi|427359885|gb|AFY42607.1| Pheophorbide a oxygenase [Nostoc sp. PCC 7107]
Length = 465
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 136/342 (39%), Gaps = 41/342 (11%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVIFR--------GKDGIPGCVQNTCAHR 255
+G + P W+PV + DL + + + + ++ C HR
Sbjct: 19 AGGLDPERFDWLEVWYPVHYVADLNKSQLTRFTLLERDLVLWWDKNEQTWRAFEDQCPHR 78
Query: 256 ACPLHLGSVN-EGRIQCPYHGWEYSTDGKCEKMP--------STQLRNVKIKSLPCFEQE 306
PL G VN +G ++CPYHGW +S GKCE +P T R + SLP ++
Sbjct: 79 LAPLSEGRVNKDGWLECPYHGWAFSGTGKCESIPQQAPGGKAETSPRAC-VNSLPTTVRQ 137
Query: 307 GMIWIWPGDEPPTA-----TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 361
G+++++PG A + L + + +LP + L++N+LD +H P+T
Sbjct: 138 GLLFVYPGKAENAAKTLVPIVDVLEENTEGWVCLNTFRDLPYDALTLMENVLDSSHIPYT 197
Query: 362 HTSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 419
H T +V P ++ + G +G W P R + PG +
Sbjct: 198 HHRTVGNRANVAPVELEIVELGKWGFKGLWQEGP-----RKGTLGKQDTTFIAPGLMWHD 252
Query: 420 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFAEQVLNE 476
T + + P + + RL R F+S L + F++ + H + + E
Sbjct: 253 LTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSNLPGL-FLKLTPRWYSHLGQNGVLE 311
Query: 477 DLRLVLGQQER-------MNNGANVWNLPVGYDKLGVRYRLW 511
D ++ L QER +N + LP D + R W
Sbjct: 312 DDQIFLHHQERYLEQKGGTDNFTKAFYLPTKADIFVFQLRSW 353
>gi|334345778|ref|YP_004554330.1| Rieske (2Fe-2S) domain-containing protein [Sphingobium
chlorophenolicum L-1]
gi|334102400|gb|AEG49824.1| Rieske (2Fe-2S) iron-sulfur domain protein [Sphingobium
chlorophenolicum L-1]
Length = 351
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 106/266 (39%), Gaps = 36/266 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L W+ A ST++ + + + +I+R DG + + C HR PL LG +
Sbjct: 8 LMKAWYAAALSTEVDGEQLFHRKILGKSVLIYRTADGKAVAMHDRCPHRFAPLSLGKRDG 67
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQ---LRNVKIKSLPCFEQEGMIWIWPG-DEPPTATI 322
+I CPYH +++ G+C P + ++ + P E+ G +WIW EP + +
Sbjct: 68 DQISCPYHALKFNAQGQCTHNPHGNGHIPKAAQVDTFPIEERYGFLWIWMDPSEPDLSLL 127
Query: 323 PCLLP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 376
P P P+ A M LP+ + L++DN++DL+H H +G P +
Sbjct: 128 PDYSPLDIGHPNAL---AHTYMHLPVNYELIIDNVMDLSHIDHVHGEIITTRGKLSPIVP 184
Query: 377 KFLTPASGLQGYWD--PYPIDMEFRP-------PCMVLSTIGISKPGKL-------EGQN 420
A + W+ P M F P I S P + + +
Sbjct: 185 TLRETARNISARWEWSQQPAMMIFAPFLARAGDEAKQFFDITWSAPANIQLTVAAVQDSD 244
Query: 421 TRQCATHLHQLHVCLPSSRKKTRLLY 446
+ A + LH C P+ T +
Sbjct: 245 SFDDALDQYDLHTCTPAGPFSTHYFF 270
>gi|21229775|ref|NP_635692.1| vanillate O-demethylase oxygenase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66766652|ref|YP_241414.1| vanillate O-demethylase oxygenase [Xanthomonas campestris pv.
campestris str. 8004]
gi|21111267|gb|AAM39616.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66571984|gb|AAY47394.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. campestris str. 8004]
Length = 350
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 133/334 (39%), Gaps = 55/334 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVN 265
RL W VA S+++ + EP V++R G + + ++ C HR PL +GS +
Sbjct: 21 RLAQHWHAVALSSEVSEAPFKAMLLDEPLVLYRLGAELV--AARDVCPHRGVPLSMGSAD 78
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 321
+ C YHG + G+C +P++ +N+ ++ + E+ G+IW+ +
Sbjct: 79 GAGVVCAYHGLRFGAGGRCNHIPASPNQNIPAKMRLHTYAVAERYGLIWVCLAKPAGVSA 138
Query: 322 IPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWSVP 373
+PP GF+ ++ L+ +D+AH F HT+TFA+ VP
Sbjct: 139 AEVQIPPMPGWDEDGFQQIVCPGFDIAGSAARQLEGFIDVAHFAFVHTATFAQPDKREVP 198
Query: 374 SLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKPGK 415
+ TP Y Y +DM E P TI PGK
Sbjct: 199 AYTTTETPTGFNADYLSSVANYSVDMPLPDVDPGFQWLRHFEVHLPFTATLTIHFPVPGK 258
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
L ++ P S+ KTRLL ++ +F + H+P F +V
Sbjct: 259 -----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLRVFE 302
Query: 476 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
ED +V Q+ + + + D+ + YR
Sbjct: 303 EDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|427739322|ref|YP_007058866.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
gi|427374363|gb|AFY58319.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
Length = 340
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 213 RLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
+ ++FW+ VA S LK + + E IFRG+DG P +++ C HR L G V
Sbjct: 2 KFEDFWYVVALSNQLKPNKVLSRTILGEWLAIFRGEDGKPVALRDRCIHRNSRLSKGKVC 61
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 320
+G+I+CPYHGW Y G+ K+PS Q + + + EQ+G I++ +P
Sbjct: 62 QGKIECPYHGWVYDNTGRVVKVPSQANNLCQSKMARCQLYQTKEQDGYIYVRLSSQPSEE 121
Query: 321 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
P +P G+E +++ +N +D+ H H F
Sbjct: 122 FTPFKMPLYQQPGWET-VKVINRFNNNVTNCAENFIDVPHTASVHPGIF 169
>gi|423128479|ref|ZP_17116158.1| hypothetical protein HMPREF9694_05170 [Klebsiella oxytoca 10-5250]
gi|376392961|gb|EHT05622.1| hypothetical protein HMPREF9694_05170 [Klebsiella oxytoca 10-5250]
Length = 345
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA + D+ + E VI+R K + ++ C HR PL LG +E
Sbjct: 21 RLAKCWHPVARACDIGPAPVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHDE 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIWPGDEPPTATI 322
I CPYHG + DG+C ++PS+ + V K S E+ G+IW +P
Sbjct: 80 EGIVCPYHGLRFGEDGRCNRIPSSPDQPVPAKLNLTSFAVEERYGLIWTCMAFDPENPMP 139
Query: 323 PCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLVK 377
++P GF+ E+ G ++ LD+AH + HT TFA VP+
Sbjct: 140 LPVMPHWHDDGFQQINCPAFEVNGFAGRQVEGFLDVAHFAWIHTDTFADPDNQVVPNYTP 199
Query: 378 FLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNTR 422
TP + YW YP EFR P +T+ I PG+
Sbjct: 200 QETPFGFIADYWSSVGNYPASSEFRAPEGFQWLRHFEMHLPFTATLTIHFPGE------- 252
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 482
L ++ P S + TR+ ++ +F HVP F +V ED +V
Sbjct: 253 ---ARLVIMNAASPVSSRITRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMVE 304
Query: 483 GQQ-ERM 488
Q+ ER+
Sbjct: 305 TQRPERL 311
>gi|312174201|emb|CBX82454.1| putative vanillate O-demethylase oxygenase subunit [Erwinia
amylovora ATCC BAA-2158]
Length = 344
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 129/302 (42%), Gaps = 37/302 (12%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL +W PVA + D+ + EP VI+R DG ++ C HR PL LG ++
Sbjct: 20 RLAGYWHPVALAADIGQAPVKAVLLDEPLVIYR-IDGQVVVARDVCPHRGVPLTLGFHDQ 78
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEPP 318
I CPYHG + G+C ++PS+ + + K + E+ G+IW+ G PP
Sbjct: 79 AGIICPYHGLRFGEGGRCNRIPSSPEQAIPAKLHLLTYASEERYGLIWVCLAAAEGAVPP 138
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF--AKGWSVPSLV 376
+P +GF+ ++ G ++ LD+AH + HT TF A+ +VP
Sbjct: 139 LPVMPH-WEDAGFQQIVCPHFDVAGFAGRQVEGFLDVAHFAWIHTETFADAENQAVPPYN 197
Query: 377 KFLTPASGLQGYWDP---YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ--- 430
TP YW Y D E + P + ++ T H Q
Sbjct: 198 PVETPYGFSVDYWSSVSNYSADSERQAP----EGFQWLRHFEMHLPFTATLTIHFPQQEK 253
Query: 431 ---LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ-E 486
++ P S +KTRL ++ +F H+P + F +V ED +V Q+ E
Sbjct: 254 LVIMNAASPVSARKTRLFAPIARNFD---LHIPPEEV--HAFNHRVFEEDRLMVESQRPE 308
Query: 487 RM 488
R+
Sbjct: 309 RL 310
>gi|67925326|ref|ZP_00518682.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
gi|67852825|gb|EAM48228.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
Length = 468
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 138/347 (39%), Gaps = 38/347 (10%)
Query: 197 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVI--------FRGKDGIPGCV 248
P K+ ++ G P + W+PV + DL + + + K+
Sbjct: 13 PEKT-SIIGGSDPDYFDWQEVWYPVHYVEDLDKTRPTAFTLLEKNIVIWWEEKNNQWSVF 71
Query: 249 QNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSL 300
++ C HR PL G +NE G ++CPYHGW +S G CE +P + + +K+L
Sbjct: 72 EDQCPHRLAPLSEGRINESGCLECPYHGWAFSGQGNCEIIPQQHPTGKAEKSLRASVKTL 131
Query: 301 PCFEQEGMIWIWPG-----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDL 355
P ++G+++++ G + P + L S + +LP + L++N+LD
Sbjct: 132 PTQVRQGLLFVYAGKPENAEITPIPLVDVLEEDSDEWVCLNTFRDLPYDALTLMENVLDS 191
Query: 356 AHAPFTHTSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKP 413
+H P+TH + +V P ++ + G +G W+ P R + P
Sbjct: 192 SHIPYTHHKSVGNRANVSPVELEVIESGKWGFKGVWEEGP-----RKGTLGRQETNFVAP 246
Query: 414 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAE 471
+ T + + P + K RL R F+S + + + H +
Sbjct: 247 AMMYHDLTSKQFGRTLTVVYATPIGKGKCRLFARFPFKFSSKIPKFFIKLTPRWYSHIGQ 306
Query: 472 QVLNEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
+ ED ++ L QER + A + LP D + +W
Sbjct: 307 NGVLEDDQIFLHHQERYLEQKGGSSKFAKAFYLPTKADLFVFQLHIW 353
>gi|218441166|ref|YP_002379495.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218173894|gb|ACK72627.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 349
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 21/199 (10%)
Query: 215 KNFWFPVAFSTDLKDD--TMEPW----VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+N W+ VA S ++K ++ W VI+R + G+ ++++C HR L G++
Sbjct: 16 RNHWYVVARSCEVKAQPISITLWYQKIVIYRDQAGMIHALEDSCPHRLVKLSQGAIVGNE 75
Query: 269 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDE---PPTAT 321
I+C YHGW ++ +GKC +P + +L +I+S P E +G IW++PGD+ +
Sbjct: 76 IECAYHGWRFNGEGKCTLIPYLNENQKLPPCQIRSYPVQELDGFIWVFPGDKNYLNQESV 135
Query: 322 IPCLLPPSGF--EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 379
P +P I +++ P L++NL+D+ H H + W+ L
Sbjct: 136 QPMGVPEWEHLNYIATVSIIDCPSHFSFLIENLMDMYHG---HLHDNYQAWTSAKLQNLS 192
Query: 380 TPASGLQGYWDP---YPID 395
+ + Y+D Y ID
Sbjct: 193 VNLNRVDAYYDAQSYYTID 211
>gi|359398803|ref|ZP_09191819.1| hypothetical protein NSU_1505 [Novosphingobium pentaromativorans
US6-1]
gi|357600041|gb|EHJ61744.1| hypothetical protein NSU_1505 [Novosphingobium pentaromativorans
US6-1]
Length = 352
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ S+D +D + P +R DG + + C HR PL +G +
Sbjct: 3 LKNVWYVAGPSSDFGEDVVSRRICDRPVAFYRKSDGSIAALHDRCPHRFVPLSMGQREDD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRN---VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YHG + DG C+ P+ N + + E+ G WIW G+ P
Sbjct: 63 SLRCGYHGLRFGPDGVCDDKPAGDQENPAKICTQHFAVEERYGYAWIWMGEAENAK--PA 120
Query: 325 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH 362
++P F E +++ H L+ DNLLDL+H + H
Sbjct: 121 MIPDFSFITSGEFKCEAGYLKVQGHHELITDNLLDLSHVNYLH 163
>gi|422652104|ref|ZP_16714892.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. actinidiae str. M302091]
gi|330965175|gb|EGH65435.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. actinidiae str. M302091]
Length = 354
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ + ++ D + E V +R ++ V++ C HR PL LG V G+
Sbjct: 4 KNAWYVACTADEVADKPLGRQICNEKMVFYRDQNQQIVAVEDFCPHRGAPLSLGYVENGQ 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
+ C YHG DGK MP ++R K+ E+ G IW+WPG+ P L+
Sbjct: 64 LVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAVERYGFIWVWPGEREKAD--PALIH 121
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
+ + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|388544418|ref|ZP_10147706.1| vanillate demethylase oxygenase subunit [Pseudomonas sp. M47T1]
gi|388277601|gb|EIK97175.1| vanillate demethylase oxygenase subunit [Pseudomonas sp. M47T1]
Length = 364
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
+P+V FR + G + + C HR L G + +QCPYHGW +S DG C +P+
Sbjct: 20 QPFVAFRDEHGQARLLSDVCVHRGGSLSAGGKVDASVQCPYHGWRFSADGVCTHIPAQPH 79
Query: 293 RNVKIK----SLPCFEQEGMIWIWPGD-----EPPTATIPCLLPPSGFEIHAEIVMELPI 343
+ +K + P E+ G IW + GD PP + + P+ + +
Sbjct: 80 ARIPLKARVDAYPTVERHGWIWAFLGDLPEAERPPLPALDWVDDPAVRVVSGHFDWDASW 139
Query: 344 EHGLLLDNLLDLAHAPFTHTSTFA 367
+ +++N LD AHAPF H +TF
Sbjct: 140 DR--VMENGLDFAHAPFVHGTTFG 161
>gi|347760397|ref|YP_004867958.1| vanillate O-demethylase oxygenase [Gluconacetobacter xylinus NBRC
3288]
gi|347579367|dbj|BAK83588.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
xylinus NBRC 3288]
Length = 360
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 27/192 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L FW+PVA D+ D + EP V++R + I + C HR PL LGS +
Sbjct: 28 LARFWYPVALERDVGDKPLAAMLLDEPLVVYRAGEEI-VIAHDLCPHRGVPLSLGSGDGR 86
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWI-------WPGDE 316
I C YHG+ + G+C ++P+ + +++ P + G+IW WP D
Sbjct: 87 SIACAYHGFRFGGAGRCVRIPAHPDNAIPSKMNLRTYPAIRRYGLIWTCLRPDGQWPQDA 146
Query: 317 PP---TATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 370
+A IP L+P GF+ +++ G ++ LD+AH F HT+TFA
Sbjct: 147 DAIRDSADIP-LMPHWEDVGFQQIVCPSIDIHGFAGRQMEGFLDVAHFAFVHTATFADAD 205
Query: 371 S--VPSLVKFLT 380
+ VPS LT
Sbjct: 206 NPVVPSYRPVLT 217
>gi|251797010|ref|YP_003011741.1| Rieske (2Fe-2S) domain-containing protein [Paenibacillus sp. JDR-2]
gi|247544636|gb|ACT01655.1| Rieske (2Fe-2S) domain protein [Paenibacillus sp. JDR-2]
Length = 325
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 30/174 (17%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L++ W PVA + D+ D E VIFR K G+ +++ C HR PL LG V+
Sbjct: 8 LEHEWHPVAIAADVSDTPKQVIVLGEKVVIFRTKQGVKA-MKDLCIHRGVPLSLGRVDND 66
Query: 268 RIQCPYHGWEYSTDGKC---EKMPSTQLRNVKIKSLP--CFEQEGMIWIWPGDEPPTATI 322
I C YHGW Y DG+C MP +Q +K K+ C E+ G +W+ G EP
Sbjct: 67 EIVCAYHGWRYDGDGRCVCIPAMPKSQAIPLKAKTQTYLCLERYGFVWVCLG-EPKEE-- 123
Query: 323 PCLLPPSGFEIHAEIVMELPIEHG---------LLLDNLLDLAHAPFTHTSTFA 367
PP ++ E+ LPI G +++N LD++H F H
Sbjct: 124 ---YPPLEGKVEEEL---LPIWMGPYPVQASAPRVIENFLDVSHLMFVHEGLLG 171
>gi|124025557|ref|YP_001014673.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. NATL1A]
gi|123960625|gb|ABM75408.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. NATL1A]
Length = 444
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 32/180 (17%)
Query: 218 WFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+ V+ S +K+ + EP V++R ++GI CV++ C HR G V G++
Sbjct: 51 WYSVSSSESIKEGKLNHFTIYNEPLVLYRDREGIVRCVKDVCPHRGASFLGGEVINGQLV 110
Query: 271 CPYHGWEYSTDGKCEKMP------------STQLRNVKIKSLPCFEQEGMIWIWPGDEPP 318
CPYHG +S+ G C + +++K+ PC E+EG I+I+ P
Sbjct: 111 CPYHGARFSSQGSCTNLDRITCQHIIDSNYDNYAKSIKLFQYPCVEKEGYIYIYYTGTPL 170
Query: 319 T--------ATIPCLLPPS-GFEI----HAEIVMELPIEHGLLLDNLLDLAHAPFTHTST 365
++I LLP S GF + E+ ++ + +++N LD+ H + H T
Sbjct: 171 ANIEDFQIKSSINSLLPDSYGFPSLEYEYEEVYVDFKADWARIIENHLDILHVFWMHGDT 230
>gi|72382058|ref|YP_291413.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. NATL2A]
gi|72001908|gb|AAZ57710.1| rieske 2Fe-2S family protein [Prochlorococcus marinus str. NATL2A]
Length = 444
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 32/180 (17%)
Query: 218 WFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+ V+ S +K+ + EP V++R ++GI CV++ C HR G V G++
Sbjct: 51 WYSVSSSESIKEGKLNHFTIYNEPLVLYRDREGIVRCVKDVCPHRGASFLGGEVINGQLV 110
Query: 271 CPYHGWEYSTDGKCEKMP------------STQLRNVKIKSLPCFEQEGMIWIWPGDEPP 318
CPYHG +S+ G C + + +++K+ PC E+EG I+I+ P
Sbjct: 111 CPYHGARFSSQGSCTNLDRITCQHIIDSNYDSYAKSIKLFQYPCVEKEGYIYIYYTGTPL 170
Query: 319 T--------ATIPCLLPPS-GFEI----HAEIVMELPIEHGLLLDNLLDLAHAPFTHTST 365
++I LLP S GF + E+ ++ + +++N LD+ H + H T
Sbjct: 171 ANIEDFQIKSSINSLLPDSYGFPSLEYEYEEVYVDFKADWARIIENHLDILHVFWMHGDT 230
>gi|399156766|ref|ZP_10756833.1| iron-sulfur protein [SAR324 cluster bacterium SCGC AAA001-C10]
Length = 449
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 197 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQN 250
P + L GP P L+ FW PV + DL D + E V+FR G G V
Sbjct: 22 PDEELTQVGPETPCGEYLRRFWHPVYLTNDLCDLPVTLKILGEELVLFRDLSGTLGLVHK 81
Query: 251 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP------STQLR-NVKIKSLPCF 303
C HR L G E I+C YHGW + TDGK P S +L+ +K+ + P
Sbjct: 82 RCPHRQASLEYGKCEEHGIRCCYHGWHFDTDGKLLDAPGQPENLSDRLKLRIKLGAYPVV 141
Query: 304 EQEGMIWIWPGDEPPTATIP--CLLPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAP 359
E +G+I+ + G P A +P + FE + + P L LD +LD H
Sbjct: 142 EYKGLIFSYMG---PIAEMPEFPVFDSMEFEKMEMVPYKAPFRCNWLQVLDAILDPLHTS 198
Query: 360 FTHTST----FAKGWSVPSLVKFL 379
F H++ F++G+ + F
Sbjct: 199 FLHSNIGRVQFSEGFGEVGQMDFF 222
>gi|188989785|ref|YP_001901795.1| oxygenase subunit [Xanthomonas campestris pv. campestris str. B100]
gi|167731545|emb|CAP49720.1| oxygenase subunit [Xanthomonas campestris pv. campestris]
Length = 358
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 25/171 (14%)
Query: 216 NFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA+ +++ + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEVRH-ALTPRKLCNLDVVLYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 324
+ C YHG Y+ G+C MPS + N ++ P E+ +W+WPGD + A IP
Sbjct: 70 VVCGYHGLVYNAQGRCVHMPSQETINPSACVRGFPVAEKHRYVWVWPGDPAQADVALIPD 129
Query: 325 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|119491090|ref|ZP_01623248.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
gi|119453635|gb|EAW34795.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
Length = 343
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 22/177 (12%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ VA S ++K + +P ++FR G +++ C HR L G + G I
Sbjct: 15 NHWYVVARSNEVKTQPLGVTLWNQPIILFRDSQGKIQALEDRCPHRQVKLSHGKIIAGLI 74
Query: 270 QCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+C YHGW+++T G+C K+P + +L N +I++ P E +G IW++ G E T T P
Sbjct: 75 ECAYHGWQFNTQGQCVKIPYLAENQKLPNCQIRNYPVQELDGFIWLFLG-ENSTQTQPLG 133
Query: 326 LPPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 377
+P H + + + H +++NL+D+ H H + W+ L K
Sbjct: 134 VPEWD---HLNYIATVSLIHCQAHYSFVIENLMDMYHG---HLHQNWQAWTDAVLEK 184
>gi|255261229|ref|ZP_05340571.1| rieske domain protein [Thalassiobium sp. R2A62]
gi|255103564|gb|EET46238.1| rieske domain protein [Thalassiobium sp. R2A62]
Length = 346
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMEPWV------IFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ A+ ++ D + V +FR + G +++ C HR PL G +
Sbjct: 3 LKNAWYVAAWDHEVTRDLQQIIVLGKKICVFRTEAGELVALEDACPHRKLPLSKGRIKGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
++C YHG ++ G+C P T N K+ + P E+ G++WIW G+ P A +
Sbjct: 63 TLECGYHGLTFNCAGQCVWAPGTGGIPSNAKVHAYPLHEKYGLVWIWMGN-PALADASDI 121
Query: 326 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
++ I+ MEL + L+ DNLLD H + H S+FA
Sbjct: 122 FEIENYDNPEWGINRGDAMELDCNYLLMCDNLLDPTHVAWVHQSSFA 168
>gi|312960146|ref|ZP_07774658.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
gi|311285640|gb|EFQ64209.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
Length = 347
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ A+ ++K + EP V FR G + + C HR PL +G +
Sbjct: 4 LRNVWYAAAWGNEIKAGELFQRTLLNEPVVFFRDTQGNAQAIADRCPHRFAPLGMGILKG 63
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
++CPYHG E+ G C P + KIK+ P E+ ++WIW GD P
Sbjct: 64 DAVRCPYHGLEFDGSGACVHNPHGDGAIPKAAKIKAYPLVERYSLLWIWMGD--PHLADA 121
Query: 324 CLLPPSGF--EIHAEI---VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
L+P E H + + + L DN++DL+H F H ST
Sbjct: 122 ALIPDFNCMDEDHWYVGKRYLHAKANYVLETDNIMDLSHIEFLHPSTLG 170
>gi|114765025|ref|ZP_01444172.1| Rieske (2Fe-2S) protein [Pelagibaca bermudensis HTCC2601]
gi|114542572|gb|EAU45597.1| Rieske (2Fe-2S) protein [Pelagibaca bermudensis HTCC2601]
Length = 356
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 103/263 (39%), Gaps = 36/263 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +ST++ D+ + V+FR DG +++ C HR PL G
Sbjct: 5 VKNAWYVAGWSTEIDDELRRFTILGDNVVMFRKSDGAVAALEDRCPHRLLPLSKGKRIGD 64
Query: 268 RIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPG-----DEPPTA 320
+QC YHG + G C ++P T L ++ + S P E+ G++WIW G DE
Sbjct: 65 TVQCGYHGLTFDCSGACVRVPGQTNLPKSAYVISYPIVEKHGIVWIWMGDPEKADEAQVF 124
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK- 377
+P P+ H + + L + + +NL+D AH F H +T S VP V+
Sbjct: 125 DMPEFSDPAWAAHHGD-ALHLKSNYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVQT 183
Query: 378 ------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 419
F G G D + PC + G + K +
Sbjct: 184 EGEAIVAWRWIRDAEPIGFFKAFGGFSGNVDRWHY-YYLYTPCTAVIDFGSIETEKKCAE 242
Query: 420 NTRQCATHLHQLHVCLPSSRKKT 442
R + LH P + T
Sbjct: 243 EDRGEGVRIFALHFMTPVTETYT 265
>gi|434395181|ref|YP_007130128.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
gi|428267022|gb|AFZ32968.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
Length = 369
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 42/233 (18%)
Query: 216 NFWFPVAFSTDLKDDTMEPWVI-------FRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ V+++ LK + P VI +R +G +++ C H+ LH G V+
Sbjct: 24 NHWYAVSWANQLKPGDIIPVVIWQQAIAVYRDINGQLHALEDFCPHKGVALHKGKVHGCN 83
Query: 269 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
+ C YHGWE+ ++G C K+P +L ++S P E+ +IWI+PG+ AT C
Sbjct: 84 LACAYHGWEFDSEGSCVKIPYLPEKQKLPRASVRSYPIQEKYNLIWIFPGEPHLAAT--C 141
Query: 325 LLP--PSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 379
LP P FE +V + +N +D+ H F H +GW P L+
Sbjct: 142 QLPHIPEFFETEWLVVPISAHFQAHFSICNENTMDVFHG-FLHQGL--QGWFDPVLLSLK 198
Query: 380 TPASGLQGYWD---------------------PYPIDMEFRPPCMVLSTIGIS 411
+ ++ ++ PI +E+R P S G+S
Sbjct: 199 ETENSVRAEYNVSYKGHMAKFLGLSDRADTVTTLPITVEYRYPHYATSLQGVS 251
>gi|41469406|gb|AAS07229.1| putative iron-sulfur cluster-binding protein [Oryza sativa Japonica
Group]
Length = 538
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 129/308 (41%), Gaps = 60/308 (19%)
Query: 250 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQL------RNVK--IKSL 300
++C HR PL G V++ GR+QC YHGW + G C+ +P +N K + S
Sbjct: 129 DSCPHRLAPLSEGRVDDKGRLQCVYHGWCFDGRGACQFIPQAPALGPAVHKNSKACVASY 188
Query: 301 PCFEQEGMIWIWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLDN 351
PC Q ++W +P EP I P +P PS ++ V +LP + +L++N
Sbjct: 189 PCVVQNNILWFYPRSEPEYKEILQRKRPPYIPQIDDPSFVTVYG--VRDLPYGYDVLVEN 246
Query: 352 LLDLAHAPFTHTSTF-AKGWSVPSLVKFLTPASGLQGYWDPYPIDME------------- 397
L+D AH P+ H + P V+F G P+ ME
Sbjct: 247 LMDPAHVPYAHKGLMRTRKKEDPGRVEFDKEGGG--------PLKMEIEETNVEGFLSML 298
Query: 398 ------FRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLD 451
F PC + + +G+ ++ + + +C+P S ++RL++ +
Sbjct: 299 DRGFFKFVAPCTFYGSPLQTPSQDDQGKEKKKKQPTVMLVFLCIPVSPGRSRLVWAFPRN 358
Query: 452 FASVL-KHVPFMQYLWRHFAEQ-VLNEDLRLVLGQQER------MNNGANVWNLPVGYDK 503
+ K +P Y H + +L+ D+ L L +ER ++N +P D
Sbjct: 359 VGVWMDKIIPRWYY---HIGQNAILDSDIYL-LHIEERNFATVGLDNWQKACYVPTSSDN 414
Query: 504 LGVRYRLW 511
+ + +R W
Sbjct: 415 MIITFRNW 422
>gi|46204241|ref|ZP_00050278.2| COG4638: Phenylpropionate dioxygenase and related
ring-hydroxylating dioxygenases, large terminal subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 361
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 138/346 (39%), Gaps = 48/346 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L N W+ V + + M E V+ R KDG +++ C HR L G +
Sbjct: 24 LPNAWYCVGPAASVAGGKMRAVALNGEQVVLGRAKDGALFALRDRCPHRGMALSKGKFDG 83
Query: 267 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 320
+ CP+HGW + TDG+C +P+ + + ++ P E G +W+ P P
Sbjct: 84 DTLMCPFHGWRFGTDGRCRDVPTLSEHDASDFSCIAVQRFPIVESAGFLWVNPHLGPSDL 143
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD--NLLDLAHAPFTHTS-TFAKGWSVPSLVK 377
+P GFE +V+EL +E L +L+D H F H + F + VK
Sbjct: 144 EAVPAVPSLGFEPAGSLVLELEVEASFDLTTLSLVDPGHVAFVHDNWWFRASKELREKVK 203
Query: 378 FLTP--------------ASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQNTR 422
P +S L P +++EFR P + L I T+
Sbjct: 204 TFQPVPHGFVMTSHATTTSSPLYRLLGGAPEVEIEFRLPGVRLERI---------AAGTK 254
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 482
+ A + + P+ T LY S+ ++LK P + L R F L +D +++
Sbjct: 255 RVANYTFATPMG-PNRTMLTNALY-WSMPALNLLK--PIARPLMRQF----LTQDQQVLQ 306
Query: 483 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
Q ++ + L G +RL R+ LE + PF P+
Sbjct: 307 HAQAGLDRKPTMVLLGQGDLPSQWYFRLKRETLEAAREGRPFANPL 352
>gi|121608456|ref|YP_996263.1| Rieske (2Fe-2S) domain-containing protein [Verminephrobacter
eiseniae EF01-2]
gi|121553096|gb|ABM57245.1| Rieske (2Fe-2S) domain protein [Verminephrobacter eiseniae EF01-2]
Length = 343
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 124/333 (37%), Gaps = 44/333 (13%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ ++ + + +P V +R +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDEIAEQPLGRKVCGQPIVFYRPAPDRVAALEDFCPHRGAPLSLGRVCDGE 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRN-VKIKSLPCFEQEGMIWIWPGDEP---PTATIPC 324
+ C YHG DG+ MP +++ + +S P E+ G IW+WPGD P +
Sbjct: 64 LTCGYHGLRVGCDGRALSMPGQRVQGFARTRSFPVVERYGFIWVWPGDAALADPARIVHL 123
Query: 325 LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH---------------------- 362
+ + ++ L++DNL+DL H + H
Sbjct: 124 HWADNPEWAFGGGRYHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPCKTHMAGDE 183
Query: 363 --TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKL 416
TS F G P + +GL D P+D F PP VL +G++ G
Sbjct: 184 VITSRFMPGIQAPPFWQMALRMNGLP---DDQPVDRWQICHFTPPSHVLIEVGVALAGLG 240
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 476
+ + P + + M+ F P + R ++ E
Sbjct: 241 GHEAAADKKVACIVVDFITPETETSIHYFWGMARHFNP---QDPTLTARIREGQGKIFAE 297
Query: 477 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
D +++ QQ+ + + L + D GV+ R
Sbjct: 298 DRQMLEMQQQNLLHYPERKLLTLNIDAGGVQSR 330
>gi|294667820|ref|ZP_06733030.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292602446|gb|EFF45887.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 350
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 133/334 (39%), Gaps = 55/334 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVN 265
RL W VA S+++ + EP V++R G + + ++ C HR PL +G+ +
Sbjct: 21 RLAQHWHAVALSSEVSEAPFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMGTAD 78
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 321
G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+ +
Sbjct: 79 GGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAGVSD 138
Query: 322 IPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWSVP 373
+PP GF+ ++ L+ +D+AH F HT+TFA+ VP
Sbjct: 139 ADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKREVP 198
Query: 374 SLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKPGK 415
+ TP Y Y +DM E P TI PGK
Sbjct: 199 AYTTTETPTGFNADYLSSVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPVPGK 258
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
L ++ P S+ TRLL ++ +F + H+P F +V
Sbjct: 259 -----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLRVFE 302
Query: 476 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
ED +V Q+ + + + D+ + YR
Sbjct: 303 EDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|294627521|ref|ZP_06706104.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292598152|gb|EFF42306.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 350
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 133/334 (39%), Gaps = 55/334 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVN 265
RL W VA S+++ + EP V++R G + + ++ C HR PL +G+ +
Sbjct: 21 RLAQHWHAVALSSEVSEAPFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMGTAD 78
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 321
G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+ +
Sbjct: 79 GGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAGVSD 138
Query: 322 IPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWSVP 373
+PP GF+ ++ L+ +D+AH F HT+TFA+ VP
Sbjct: 139 ADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKREVP 198
Query: 374 SLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKPGK 415
+ TP Y Y +DM E P TI PGK
Sbjct: 199 AYTTTETPTGFNADYLSSVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPVPGK 258
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
L ++ P S+ TRLL ++ +F + H+P F +V
Sbjct: 259 -----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLRVFE 302
Query: 476 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
ED +V Q+ + + + D+ + YR
Sbjct: 303 EDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|381173066|ref|ZP_09882176.1| Rieske [2Fe-2S] domain protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|418518068|ref|ZP_13084221.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418520106|ref|ZP_13086156.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|380686498|emb|CCG38663.1| Rieske [2Fe-2S] domain protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|410704060|gb|EKQ62545.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410705218|gb|EKQ63696.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 350
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 133/334 (39%), Gaps = 55/334 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVN 265
RL W VA S+++ + EP V++R G + + ++ C HR PL +G+ +
Sbjct: 21 RLAQHWHAVALSSEVSEAPFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMGTAD 78
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 321
G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+ +
Sbjct: 79 GGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAGVSD 138
Query: 322 IPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWSVP 373
+PP GF+ ++ L+ +D+AH F HT+TFA+ VP
Sbjct: 139 ADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKREVP 198
Query: 374 SLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKPGK 415
+ TP Y Y +DM E P TI PGK
Sbjct: 199 AYTTTETPTGFNADYLSTVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPVPGK 258
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
L ++ P S+ TRLL ++ +F + H+P F +V
Sbjct: 259 -----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLRVFE 302
Query: 476 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
ED +V Q+ + + + D+ + YR
Sbjct: 303 EDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|78045876|ref|YP_362051.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|346723235|ref|YP_004849904.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citrumelo F1]
gi|78034306|emb|CAJ21951.1| putative vanillate O-demethylase oxygenase subunit [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|346647982|gb|AEO40606.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citrumelo F1]
Length = 350
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 133/334 (39%), Gaps = 55/334 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVN 265
RL W VA S+++ + EP V++R G + + ++ C HR PL +G+ +
Sbjct: 21 RLARHWHAVALSSEVSEAPFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMGTAD 78
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 321
G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+ +
Sbjct: 79 GGGVVCAYHGLRFGAGGRCNHIPASPSQNIPARMRLHTYAVAERYGLIWVCLAKPAGVSD 138
Query: 322 IPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWSVP 373
+PP GF+ ++ L+ +D+AH F HT+TFA+ VP
Sbjct: 139 ADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKREVP 198
Query: 374 SLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKPGK 415
+ TP Y Y +DM E P TI PGK
Sbjct: 199 AYTTTETPTGFNADYLSTVANYSVDMPLPDVAPDFQWLRHFEVHLPFTATLTIHFPVPGK 258
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
L ++ P S+ TRLL ++ +F + H+P F +V
Sbjct: 259 -----------RLVIMNAASPVSKHATRLLVPIARNFDT---HLPVEDV--HAFNLRVFE 302
Query: 476 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
ED +V Q+ + + + D+ + YR
Sbjct: 303 EDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|365881281|ref|ZP_09420602.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 375]
gi|365290555|emb|CCD93133.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 375]
Length = 452
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 17/173 (9%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTCAHRA 256
GP P ++ +W P A +L + + +V+F+ + G G + C HR
Sbjct: 14 GPSAPAGKLMRMYWQPAALVDELAGERPVRAVKLLGQDFVLFKDEQGRYGLLDRDCPHRG 73
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWI 311
L G + G ++C +HGW + DGKC + P+ + +NV+ +S P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCAFHGWLFDVDGKCLETPAEPVGSPLCQNVRQRSYPVVEKGGILWA 133
Query: 312 WPGD--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
W G+ P + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGEGAAPAFPDLDCFTAPDAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|367476973|ref|ZP_09476338.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 285]
gi|365270752|emb|CCD88806.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 285]
Length = 452
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTCAHRA 256
GP P ++ +W P A +L + + +V+F+ G G + C HR
Sbjct: 14 GPDAPAGKLMRMYWQPAALVDELAGERPVRAVKLLGQQFVLFKDAQGRYGLLDRDCPHRG 73
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 311
L G + G ++C +HGW + DG+C + P S +NVK +S P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCSFHGWLFDVDGQCLETPAEPAGSPLCKNVKQRSYPVIEKGGILWA 133
Query: 312 WPGDEPPTA--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
W G+ P A + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGEGAPPAFPDLDCFTAPDTYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|221202552|ref|ZP_03575581.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD2M]
gi|221207751|ref|ZP_03580758.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD2]
gi|221172248|gb|EEE04688.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD2]
gi|221177589|gb|EEE10007.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD2M]
Length = 370
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------- 232
A P +L+ G L R V P+ P ++W+P+A+S +LK
Sbjct: 3 AVPLPDSNTLEPASGALVRDLRRV--PIHP------DYWYPLAWSRELKRGKTLGVRFAG 54
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYS-TDGKCEKMPSTQ 291
EP V+ R + G +++ CAHR PLH G V ++C YHGW Y + G+C +P
Sbjct: 55 EPIVLVRTESGAVYALEDRCAHRQVPLHAGVVAGETLRCCYHGWTYDCSSGRCVDVPYLG 114
Query: 292 LRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE---IVMELPIEHG 346
+ +++ PC E G+I+++PGD P L S + + E+ +
Sbjct: 115 RERLPNGVRAYPCREAHGLIFVFPGDATRADERPFPLLASADDRAYKTRRFGREVKCHYS 174
Query: 347 LLLDNLLDLAHAPFTHTSTFAK 368
+ +NL+D+ H F H +
Sbjct: 175 FMHENLMDMNHQ-FLHRKQMGQ 195
>gi|221215699|ref|ZP_03588660.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD1]
gi|221164401|gb|EED96886.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD1]
Length = 370
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------- 232
A P +L+ G L R V P+ P ++W+P+A+S +LK
Sbjct: 3 AVPLPDSNTLEPASGALVRDLRRV--PIHP------DYWYPLAWSRELKRGKTLGVRFAG 54
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYS-TDGKCEKMPSTQ 291
EP V+ R + G +++ CAHR PLH G V ++C YHGW Y + G+C +P
Sbjct: 55 EPIVLVRTESGAVYALEDRCAHRQVPLHAGVVAGETLRCCYHGWTYDCSSGRCVDVPYLG 114
Query: 292 LRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS----GFEIHAEIVMELPIEH 345
+ +++ PC E G+I+++PGD P + S G++ E+ +
Sbjct: 115 RERLPNGVRAYPCREAHGLIFVFPGDATRADERPFPVLASADDRGYKTR-RFGREVKCHY 173
Query: 346 GLLLDNLLDLAHAPFTHTSTFAK 368
+ +NL+D+ H F H +
Sbjct: 174 SFMHENLMDMNHQ-FLHRKQMGQ 195
>gi|356525253|ref|XP_003531241.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 531
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 130/313 (41%), Gaps = 42/313 (13%)
Query: 241 KDGIPGCVQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------Q 291
+G+ + C HR PL G +++ GR+QC YHGW ++ G+C+ +P
Sbjct: 118 NEGVWQVHDDACPHRLAPLSDGRIDQWGRLQCVYHGWCFNGKGECKLIPQAPPDGPPVHT 177
Query: 292 LRNVKIKSLPCFEQEGMIWIWPGDEPPTATI-----PCLLPPSGFEIHAEIVMELPIEHG 346
+ + + P Q ++W WP +P I P +P + +++ I +G
Sbjct: 178 SKKACVAAYPSTVQNDILWFWPNTDPQYKDIITRKRPPYIPELDDPSYTKLMGNRDISYG 237
Query: 347 --LLLDNLLDLAHAPFTHTSTF----------AKGWSVPSLVKFLTPASGL---QGYWDP 391
+L++NL+D AH P+ H +G L +G QG+
Sbjct: 238 YEVLIENLMDPAHVPYAHYGLMRTPKPKVKVDREGGRPLELSIETLDINGFTANQGW--- 294
Query: 392 YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLD 451
+F PPC+ +P + VC+P S K+RL++ +
Sbjct: 295 --SKSKFMPPCIFYVYTDSDQPASSAETQKSSAQKKFALIFVCVPVSPGKSRLIWCFPRN 352
Query: 452 FAS-VLKHVPFMQYLWRHFAEQVLNEDLRLV-LGQQERMNNGANVWN----LPVGYDKLG 505
F + K VP ++++ ++L+ DL L+ + +Q+ ++ G W+ +P D L
Sbjct: 353 FGVWIDKIVP--RWIFHVGQNRILDSDLYLLHVEEQKIVDIGPKNWHKACFVPTKSDALV 410
Query: 506 VRYRLWRDALEKG 518
+ YR W G
Sbjct: 411 IGYRNWLKKYAGG 423
>gi|414175230|ref|ZP_11429634.1| hypothetical protein HMPREF9695_03280 [Afipia broomeae ATCC 49717]
gi|410889059|gb|EKS36862.1| hypothetical protein HMPREF9695_03280 [Afipia broomeae ATCC 49717]
Length = 360
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 89/185 (48%), Gaps = 30/185 (16%)
Query: 207 VQPYNTRLK------NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCV---QN 250
VQP + L+ + W+P+A+S +LK EP V+ R KDG G V ++
Sbjct: 13 VQPPDIDLRRIGSHPDHWYPLAWSKELKPGKTYAAQFAGEPIVLIRPKDG--GAVFALED 70
Query: 251 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEG 307
CAHR PL G V ++C YHGW Y GKC +P +L N +++ PC EQ+G
Sbjct: 71 RCAHRQVPLSKGVVEGCAVRCCYHGWTYDASGKCIDVPYLGKDKLPN-GVRAYPCREQDG 129
Query: 308 MIWIWPGDEPPTATIPCLLPPSGFEIHA----EIVMELPIEHGLLLDNLLDLAHAPFTHT 363
+I IWPGD P A I L P A ++ + + +NL+D+ H F H
Sbjct: 130 LILIWPGD--PKA-ITELGPLGSAHDKAFKTRRFGKQVRCHYTFMHENLMDMNHQ-FLHR 185
Query: 364 STFAK 368
K
Sbjct: 186 RQMGK 190
>gi|218291425|ref|ZP_03495351.1| Rieske (2Fe-2S) domain protein [Alicyclobacillus acidocaldarius
LAA1]
gi|218238715|gb|EED05933.1| Rieske (2Fe-2S) domain protein [Alicyclobacillus acidocaldarius
LAA1]
Length = 327
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 127/331 (38%), Gaps = 56/331 (16%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDD-------TMEPWVIFRGKDGIPGCVQNTCAHRAC 257
PV + W+ V FS L V+FR G + C HR
Sbjct: 6 APVPSEDRVFPATWYAVCFSAQLTRRRPHAARVAGRDLVLFRDASGHVRALSRYCTHRGA 65
Query: 258 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWP 313
L LG V G + C YHGW++ DG+C +P+ R + ++ P E+ G+ W++
Sbjct: 66 DLALGRVEGGHLACAYHGWQFQGDGRCTLIPAHPDRPIPDFAHNRAYPACERGGIAWVYL 125
Query: 314 GDE--PPTATIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 370
G E PP + L + + E V + + +++++LD+AH F H T G
Sbjct: 126 GGETSPPEPRVFSELTDGSYRLVPYEDVWQAHLTR--VVESVLDVAHLAFVHRKTI--GR 181
Query: 371 SVPSLVK------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 418
P+++ + G+ YW P + I +P + +G
Sbjct: 182 RTPAIIPRVSFDADDSDRILIRNGGGVLEYWFP---------------QMWILRPAEGKG 226
Query: 419 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 478
P + TR+L FA + VP M L+R ++ +VL ED
Sbjct: 227 G--------FINFVTFTPVDAETTRILGYAGRTFA---RSVPGMDALFRRYSLRVLREDQ 275
Query: 479 RLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
R+V Q R A V D VR+R
Sbjct: 276 RVVESQHPRPIPEALRMEAHVPADAPQVRFR 306
>gi|89054066|ref|YP_509517.1| Rieske (2Fe-2S) protein [Jannaschia sp. CCS1]
gi|88863615|gb|ABD54492.1| vanillate O-demethylase oxygenase subunit [Jannaschia sp. CCS1]
Length = 346
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTMEPWVI------FRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ A+ +++ D + V+ FR + G +++ C HR PL G +
Sbjct: 3 LKNAWYVAAWDHEVRTDLQQIMVLGEKICMFRTQSGDLVALEDACPHRKLPLSKGRIKGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
++C YHG ++ G C P N ++ + P E+ G+IWIW G+ P L
Sbjct: 63 TVECGYHGLTFNCAGTCVWAPGASGIPSNARVHAYPLAEKYGLIWIWMGN-------PAL 115
Query: 326 LPPSG-FE----------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
PS FE I+ MEL + L+ DNLLD H + H S+FA
Sbjct: 116 ADPSDIFEIENYGNPDWGINRGAAMELDCNYLLMCDNLLDPTHVAWVHQSSFA 168
>gi|170750020|ref|YP_001756280.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
radiotolerans JCM 2831]
gi|170656542|gb|ACB25597.1| Rieske (2Fe-2S) domain protein [Methylobacterium radiotolerans JCM
2831]
Length = 377
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS------ 289
V+ R DG P +++ C HR L G + + CP+HGW + TDG+C +P+
Sbjct: 70 VLGRAPDGTPFALRDRCPHRGMALSKGRFDGDTLMCPFHGWRFGTDGRCRDVPTLSEHDA 129
Query: 290 TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLL 349
++++ P E G +W+ P P +P +P FE +V+EL +E L
Sbjct: 130 ADFSRIQVQRFPVRESAGFLWVNPHLGPAAGAVPE-VPALDFEPAGFLVVELEVEASFDL 188
Query: 350 D--NLLDLAHAPFTHTS 364
+L+D H F H S
Sbjct: 189 TTLSLVDPGHVAFVHDS 205
>gi|423696632|ref|ZP_17671122.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
gi|388003095|gb|EIK64422.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
Length = 347
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ A+ T++K + EP V FR G + + C HR PL +G +
Sbjct: 4 LRNVWYAAAWGTEVKAGELFQRTLLNEPVVFFRDTQGNAQAIADRCPHRFAPLGMGILKG 63
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
++CPYHG E+ G C P + K+K+ P E+ ++WIW GD P
Sbjct: 64 DAVRCPYHGLEFDGSGACVHNPHGDGAIPKAAKVKAYPLAERYSLLWIWMGD--PHLADA 121
Query: 324 CLLPPSGF--EIHAEI---VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
L+P E H + + + L DN++DL+H F H ST
Sbjct: 122 TLIPDFNCMDEDHWYVGKRYLHARANYVLETDNIMDLSHIEFLHPSTLG 170
>gi|86749388|ref|YP_485884.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
gi|86572416|gb|ABD06973.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
Length = 452
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 17/173 (9%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTCAHRA 256
GP P ++ +W PVA +L+ + E +V+F+ + G G + C HR
Sbjct: 14 GPATPCGKLMRAYWQPVALVDELEGERPIKPVRLLGEDFVLFKDETGRYGLMDRDCPHRG 73
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 311
L G + G ++C +HGW + DGKC + P S +N+K ++ P + GM+W
Sbjct: 74 ADLAFGRLENGGLRCAFHGWLFDVDGKCLETPAEPGNSVLCQNIKQRAFPVVAKGGMLWT 133
Query: 312 WPG-DEPPT-ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
+ G EPP I C + P + + E L + +D AHA F H
Sbjct: 134 YLGAGEPPAFPEIDCFVAPDSHVFAFKGLFECNWLQALEVG--IDPAHASFLH 184
>gi|347527143|ref|YP_004833890.1| putative dioxygenase [Sphingobium sp. SYK-6]
gi|345135824|dbj|BAK65433.1| putative dioxygenase [Sphingobium sp. SYK-6]
Length = 446
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 29/186 (15%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM--------EPWVIFRGKDGIPGCVQN 250
++L +GP P ++ +W P + E ++ FR DG G V +
Sbjct: 7 RTLTQTGPETPMGRLMRQYWIPAFLPEETPAGGAPLRLRLLGENFLAFRSPDGSLGVVDH 66
Query: 251 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLRN-VKIKSLPCFEQ 305
CAHR L G EG I+C YHGW++ G+C +MPS T ++ VKI++LP E+
Sbjct: 67 RCAHRCASLFYGRNEEGGIRCVYHGWKFDRTGQCIEMPSEPPETDYKHLVKIRALPVVER 126
Query: 306 EGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL---------LDNLLDLA 356
G+ W++ GD +P LP F++ E+ + PI + L+ +D
Sbjct: 127 YGVAWVYMGDR----DVPPPLP--HFDLD-ELGADEPISVSFMMRECNWLQALEGDIDTC 179
Query: 357 HAPFTH 362
H F H
Sbjct: 180 HVGFLH 185
>gi|421480173|ref|ZP_15927817.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
gi|400221579|gb|EJO52022.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
Length = 370
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------- 232
A P +L+ G L R V P+ P ++W+P+A+S +LK
Sbjct: 3 AVPLPDSNTLEPAGGALVRDLRRV--PIHP------DYWYPLAWSRELKRGKTLGVRFAG 54
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYS-TDGKCEKMPSTQ 291
EP V+ R + G +++ CAHR PLH G V ++C YHGW Y + G+C +P
Sbjct: 55 EPIVLVRTESGAVYALEDRCAHRQVPLHAGVVAGETLRCCYHGWTYDCSSGRCVDVPYLG 114
Query: 292 LRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE---IVMELPIEHG 346
+ +++ PC E G+I+++PGD P L S + + E+ +
Sbjct: 115 RERLPNGVRAYPCREAHGLIFVFPGDATRADERPFPLLASADDRAYKTRRFGREVKCHYS 174
Query: 347 LLLDNLLDLAHAPFTHTSTFAK 368
+ +NL+D+ H F H +
Sbjct: 175 FMHENLMDMNHQ-FLHRKQMGQ 195
>gi|108757336|ref|YP_635237.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
xanthus DK 1622]
gi|108461216|gb|ABF86401.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus
xanthus DK 1622]
Length = 376
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 39/200 (19%)
Query: 214 LKNFWFPVAFSTDLKDDTMEPW---------VIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
LK+FW+ ST+LK EP V+FR G P +++ C HR L G+V
Sbjct: 15 LKDFWYVACLSTELKPG--EPLARTLFGTGVVLFRDVQGQPTALRDRCLHRNARLSRGAV 72
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNV----------------KIKSLPC 302
GRI CPYHGW Y G ++PS ++L + ++ P
Sbjct: 73 FNGRIGCPYHGWVYDASGAVVEVPSLGPSQRSELLDADACAREGLATAPCALGRLTRFPT 132
Query: 303 FEQEGMIWIWPGDEPPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 359
EQ+G+++++ G P + P +P G+ ++ +V P L++N +D+ H
Sbjct: 133 LEQDGLVFVYMGGAEPARSAPFRVPYWDQEGWTVYF-MVTRFPNGVTNLVENFMDVPHTL 191
Query: 360 FTHTSTFAKGWS--VPSLVK 377
F H F + S VP+ V+
Sbjct: 192 FVHPGWFRRPASKRVPATVR 211
>gi|385206143|ref|ZP_10033013.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
gi|385186034|gb|EIF35308.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
Length = 406
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 52 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTEAGKVFALEDRCAHRQVPLHQGVVDGES 111
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 315
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 112 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCHEVEGLIFVFPGD 160
>gi|148252459|ref|YP_001237044.1| dioxygenase [Bradyrhizobium sp. BTAi1]
gi|146404632|gb|ABQ33138.1| putative dioxygenase [Bradyrhizobium sp. BTAi1]
Length = 452
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTCAHRA 256
GP P ++ +W P A +L D + +V+F+ + G G + C HR
Sbjct: 14 GPSAPAGKLMRMYWQPAALVDELTGDRPVRAVKLLGQDFVLFKDEQGRYGLLDRDCPHRG 73
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 311
L G + G ++C +HGW + +G+C + P S +NVK ++ P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCAFHGWLFDVEGQCLETPAEPAGSALCKNVKQRAYPVVEKGGILWA 133
Query: 312 WPGD--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
W G+ P + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGNGAAPAFPDLDCFTAPEAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|419960669|ref|ZP_14476684.1| vanillate monooxygenase oxygenase subunit [Rhodococcus opacus M213]
gi|414573890|gb|EKT84568.1| vanillate monooxygenase oxygenase subunit [Rhodococcus opacus M213]
Length = 357
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 48/287 (16%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG-- 262
+T +N W+ A+ ++ + EP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTICEEPILFWRTEAGEAVAMSDRCVHRRYPLSEAPS 61
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPT 319
++ ++ C YHG+ Y +DG C +P R ++KS EQ+ +W+W D + P
Sbjct: 62 RLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLKSYQVVEQDSFVWVWIADPQNPE 121
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH------------ 362
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 122 QGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAET 181
Query: 363 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL-----S 406
T+ + +V + + F + ++G++G + D+E+ PPC+ L +
Sbjct: 182 PITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRIA 240
Query: 407 TIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 241 PIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|421598258|ref|ZP_16041719.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
CCGE-LA001]
gi|404269631|gb|EJZ33850.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
CCGE-LA001]
Length = 357
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+S ++ + + V++R DG+ +++ C HR PL LG + +
Sbjct: 10 NAWYAAAWSHEVARELSARTICGKNIVLYRRVDGLITALEDACWHRLLPLSLGHLKGDDV 69
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG +++ G+C MP+ + N +++ P E+ ++W+WPGD P P +P
Sbjct: 70 MCGYHGLVFNSAGRCSYMPAQKTINPSACVRAYPVAERHRLVWLWPGD--PALADPTKIP 127
Query: 328 PSGFEIHAEIVME------LPIEHGLLLDNLLDLAHAPFTHTSTFA 367
+ + + E L ++ L++DNL+DL H + H +
Sbjct: 128 DFHWNDGKQWIGEGGTFYQLKCDYRLVIDNLMDLTHETYVHAGSIG 173
>gi|432333907|ref|ZP_19585642.1| vanillate monooxygenase oxygenase subunit [Rhodococcus
wratislaviensis IFP 2016]
gi|430779174|gb|ELB94362.1| vanillate monooxygenase oxygenase subunit [Rhodococcus
wratislaviensis IFP 2016]
Length = 393
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 48/287 (16%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG-- 262
+T +N W+ A+ ++ + EP + +R + G + + C HR PL
Sbjct: 38 STIARNQWYVAAYGREVGRELFSRTICEEPILFWRTEAGEAVAMSDRCVHRRYPLSEAPS 97
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPT 319
++ ++ C YHG+ Y +DG C +P R ++KS EQ+ +W+W D + P
Sbjct: 98 RLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLKSYQVVEQDSFVWVWIADPQNPE 157
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH------------ 362
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 158 QGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAET 217
Query: 363 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL-----S 406
T+ + +V + + F + ++G++G + D+E+ PPC+ L +
Sbjct: 218 PITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRIA 276
Query: 407 TIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 277 PIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 320
>gi|414174881|ref|ZP_11429285.1| hypothetical protein HMPREF9695_02931 [Afipia broomeae ATCC 49717]
gi|410888710|gb|EKS36513.1| hypothetical protein HMPREF9695_02931 [Afipia broomeae ATCC 49717]
Length = 452
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTC 252
+ +GP P L+ +W P A +L+ E +V+FR + G G + C
Sbjct: 10 ITRTGPADPAGKLLRMYWQPAALVDELEGPRPIRAVKLLGENFVLFRDEHGRYGLMDRDC 69
Query: 253 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 307
HR L G + G ++C +HGW + G C + P S +N+K ++ P E+ G
Sbjct: 70 PHRGADLAFGRLENGGLRCAFHGWLFDVQGNCLETPAEPVGSVLCKNIKQRAYPVVEKGG 129
Query: 308 MIWIWPGD-EPPT-ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
++W + G+ EPP I C + P + + ++E L + +D AHA F H
Sbjct: 130 ILWAYLGEGEPPAFPEIDCFVAPDAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|434391889|ref|YP_007126836.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
gi|428263730|gb|AFZ29676.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
Length = 349
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 141/351 (40%), Gaps = 47/351 (13%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
N L++ W+ LK M EP V R ++G + N C HRA PL G
Sbjct: 4 NDFLRDVWYYALPGGSLKRGAMVAKTLLGEPIVFARSREGKVFALCNICPHRAVPLSCGR 63
Query: 264 VNEGRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDE- 316
+ I+C YHGW + G+C ++P S L+ ++K P E +G IWI+
Sbjct: 64 FDGQEIECCYHGWRFDQTGRCTEIPALVEGDSLDLKRFQVKQYPVREVQGNIWIYMASNE 123
Query: 317 ---PPTATIPCLLPPSGFEIHAEIVMELP----IEHGLLLDNLLDLAHAPFTHTSTFAK- 368
PP + + P + ++V+ L ++H ++ L+D AH F H S + K
Sbjct: 124 RKAPPATDMEVPVVPFFGDKSYQLVVTLHFPCYVDHAII--GLMDPAHISFVHRSWWWKS 181
Query: 369 GWSVPSLVKFLTPASGLQGYWDPYPIDM-EFRPPCMVLS--TIGISKPG-----KLEGQN 420
G S+ VK P+ PY M + P + L IG P +L G
Sbjct: 182 GRSLFEEVKAFDPS--------PYGFTMRRHKIPNVALGYRLIGGGAPETEIAFRLPGVR 233
Query: 421 TRQCATHLH---QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNED 477
+T H L P S +T + + + P ++ R F L++D
Sbjct: 234 IEHVSTEHHNVCNLTAVTPLSETETEVTTLLYWTTPWITAIKPLIKPFVRAF----LDQD 289
Query: 478 LRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
++V+ QQE + + + + Y+L + A+ PF P+
Sbjct: 290 RQVVIKQQEGLKYDPTLLLIRDADTQARWYYQLKAEFTRAAAEGRPFNNPV 340
>gi|162147961|ref|YP_001602422.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542578|ref|YP_002274807.1| Rieske (2Fe-2S) domain-containing protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786538|emb|CAP56120.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530255|gb|ACI50192.1| Rieske (2Fe-2S) domain protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 360
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+FW+PVA+S +LK +P + R +G +++ CAHR PL G V
Sbjct: 29 DFWYPVAWSRELKVGKTIGTRYAGQPIALVRPAEGEVFALEDRCAHRQVPLSKGVVKGQA 88
Query: 269 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QC YHGW Y G+C +P +L N +++ PC EQ+G+I+++PGD A P
Sbjct: 89 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPCREQDGLIFVFPGDPERAAATP-- 145
Query: 326 LPPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
LP + + + + + +NL+D+ H F H +
Sbjct: 146 LPRLAQTTNPDYKTRRFGRHVKCHYSFMHENLMDMNHQ-FMHMKQMGQ 192
>gi|170078842|ref|YP_001735480.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7002]
gi|169886511|gb|ACB00225.1| Rieske [2Fe-2S] domain protein; synechoxanthin biosynthesis
[Synechococcus sp. PCC 7002]
Length = 367
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 20/177 (11%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KN W+ A S +L D + E +V++R + G +++ C HR L G V
Sbjct: 29 KNHWYVAARSAELTDQPLGFTLWNEDFVLYRDQAGQVQALEDRCPHRQVKLSSGQVVGDN 88
Query: 269 IQCPYHGWEYSTDGKCEKMP---STQLR-NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YHGW++ G C +P Q R KI++LP EQ+G IW++PGD P T
Sbjct: 89 LECAYHGWQFDASGTCAHVPYLAENQKRPACKIRTLPVREQDGFIWVFPGD-PERLTDEA 147
Query: 325 L--LPPSGFEIHAEIVMELPIE----HGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 375
+ LP +E IV I+ L++NL+D+ H H + W+ L
Sbjct: 148 IQPLPIPEWEHLNYIVSVTTIDCEGHFSYLIENLMDMYHG---HLHDNYQAWASAKL 201
>gi|428305773|ref|YP_007142598.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Crinalium
epipsammum PCC 9333]
gi|428247308|gb|AFZ13088.1| Rieske (2Fe-2S) iron-sulfur domain protein [Crinalium epipsammum
PCC 9333]
Length = 340
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 213 RLKNFWFPVAFSTDLKDD------TMEPWV-IFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
+ ++FW+ VA ST+LK + + W+ IFRG DG +++ C HR L G V
Sbjct: 2 KFEDFWYVVALSTELKPNKVLSCTVLGEWLAIFRGDDGKSVALRDRCMHRNSRLSRGKVC 61
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 320
+G +QCPYHGW Y +GK +P+ L + + K EQ+G +++ D+P
Sbjct: 62 QGNLQCPYHGWVYDKNGKVVAVPAEGDNFKMLDSRQAKLYQTKEQDGYVYVRLTDQPSEE 121
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD---NLLDLAHAPFTHTSTF 366
P +P G E E V + H + + N +D+ H H F
Sbjct: 122 FEPFKMPYYG-EPGWETVRVINRFHNNVTNCAENFIDIPHTASVHPGVF 169
>gi|307726787|ref|YP_003910000.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1003]
gi|307587312|gb|ADN60709.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1003]
Length = 402
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 48 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 107
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 315
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 108 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGD 156
>gi|421852528|ref|ZP_16285215.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371479205|dbj|GAB30418.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 338
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 50/304 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L ++W P+A +L+D + P VI+R + I + C HR PL +G N
Sbjct: 15 LASYWHPIALVRELEDKPLGVTLLDAPLVIYRAGEEI-VVADDLCPHRGVPLSMGKGNGQ 73
Query: 268 RIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIW--IWPGDEPPTAT 321
+ C YHG+++ G+C ++P S + +++ P E+ G+IW + P D +
Sbjct: 74 TVACAYHGFQFGHQGQCVRIPAHPDSAIPSRLNLRTYPVVERYGLIWTCLRPQDN-EDIS 132
Query: 322 IPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLVK 377
IP + +GF+ +++ G ++ +D+AH F HT TFA VP+ +
Sbjct: 133 IPSMPHWDEAGFQQINCPWIDIAGFAGRQVEGFIDVAHFAFVHTETFADPDNPVVPAYMP 192
Query: 378 FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH---------- 427
+T PY + E+R + IG S+ G+ + + R H
Sbjct: 193 KMT----------PYGFEAEYR-SNVGNYPIGQSERGRPDFEWLRHFRVHVPFTATLEIH 241
Query: 428 ------LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
L ++ P S KKTR+ M +F + L +Q ++ F ++V ED LV
Sbjct: 242 FPDNGRLVIMNAASPVSAKKTRMFAPMCRNFDTDLP----LQDVY-DFNQKVFEEDRALV 296
Query: 482 LGQQ 485
Q+
Sbjct: 297 EAQK 300
>gi|289768563|ref|ZP_06527941.1| oxidase [Streptomyces lividans TK24]
gi|289698762|gb|EFD66191.1| oxidase [Streptomyces lividans TK24]
Length = 370
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS--TQLR 293
V++R DG C C H+ L G + I+CPYHG+ Y DG C +P+ ++ R
Sbjct: 6 VLWRDIDGNLVCQGARCPHKGANLGDGRMKGNTIECPYHGFRYGADGACRVIPAMGSEAR 65
Query: 294 ---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGF----EIHAEIVMELPIEHG 346
++++ + P EQ G++W+W GDE PTA +P + P+ +++A P+ +
Sbjct: 66 IPGSLRVPTYPVREQFGLVWMWWGDERPTADLPPVAAPAEVTDNRKLYATKRWTRPVHYT 125
Query: 347 LLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS-GLQG 387
+++LL+ H + H + + L+ + TP+ GL G
Sbjct: 126 RYIESLLEFYHVTYVHRDHWFN--YIDYLLLYGTPSKFGLDG 165
>gi|47569539|ref|ZP_00240218.1| oxidase-related protein [Bacillus cereus G9241]
gi|47553795|gb|EAL12167.1| oxidase-related protein [Bacillus cereus G9241]
Length = 315
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 126/290 (43%), Gaps = 45/290 (15%)
Query: 218 WFPVAFSTDLKDDTMEP------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
W+ V++S D+K ++ +V++R + G + C HR L LG V G++ C
Sbjct: 13 WYAVSYSKDIKKIPVKKRVAGKDFVLYRDQKGEVQALSPYCPHRGADLSLGQVVNGKLVC 72
Query: 272 PYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDE--PPTATIPCL 325
PYHGWE+ + G C ++PS + + S P E+ G+IWI+P E PP +
Sbjct: 73 PYHGWEFDSCGTCVRIPSQPNKPIPKFSHTFSYPVKEKIGLIWIYPDSEETPPEWQTFHV 132
Query: 326 LPPSGFEI---HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + F++ HA L ++++LD+AH + H T + K +
Sbjct: 133 MENTPFKLSSFHATWNAHLTRS----IESVLDIAHLAYVHKKTIGRK------TKADSTN 182
Query: 383 SGLQGYWDPYPID-----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPS 437
L+G D + +E++ P + GK E ++ Q T P
Sbjct: 183 YKLEGTLDQFIFSNGDAYLEYKFPHQWM-----LHSGKQENESFIQYIT-------FTPI 230
Query: 438 SRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQER 487
++T + M + LK+ P + + F+ +VL ED +V Q R
Sbjct: 231 DEEETLI---MGYTGRTFLKYFPLLDQILAKFSLRVLKEDQIIVESQHPR 277
>gi|325920841|ref|ZP_08182740.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
gardneri ATCC 19865]
gi|325548677|gb|EGD19632.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
gardneri ATCC 19865]
Length = 350
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 131/333 (39%), Gaps = 53/333 (15%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W VA S+++ E V++R D + ++ C HR PL +G+ +
Sbjct: 21 RLAQHWHAVALSSEVGQAPFKATLLDESLVLYRLGDELVAA-RDVCPHRGVPLSMGTADG 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTATI 322
G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+ +
Sbjct: 80 GGVVCAYHGLRFGAGGRCNHIPASPNQNIPAKMRLHTYAVAERYGLIWVCLSKPAGVSEA 139
Query: 323 PCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWSVPS 374
+PP GF+ ++ L+ +D+AH F HT+TFA+ VP+
Sbjct: 140 EVQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKREVPA 199
Query: 375 LVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKPGKL 416
TP Y Y +DM E P TI PGK
Sbjct: 200 YTTTETPTGFNADYLSSVANYSVDMPLPDVDPSFQWLRHFEVHLPFTATLTIHFPVPGK- 258
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 476
L ++ P S+ KTRLL ++ +F + H+P F +V E
Sbjct: 259 ----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLRVFEE 303
Query: 477 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
D +V Q+ + + + D+ + YR
Sbjct: 304 DRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|148555225|ref|YP_001262807.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148500415|gb|ABQ68669.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 362
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 214 LKNFWFPVAFSTDL-----KDDTMEPWV-IFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ +S DL + + W+ +FR DG + + C HR L G +
Sbjct: 4 LRNAWYVAGWSGDLGPAPRRIRVLGEWIALFRLADGTAAAIGDRCPHRFASLGDGKLVGD 63
Query: 268 RIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGD--EPPTATI 322
+QCPYHG + DG+C P + ++S P E+ G +W+W GD A I
Sbjct: 64 SLQCPYHGLRFDRDGRCVHNPHGDGSVPAGGGVRSYPLVERHGALWVWTGDRGRADPAAI 123
Query: 323 PCLL---PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
P P+ + + P E L+ DNLLDL+HA F H
Sbjct: 124 PDFARFDDPALAVSRGHLKVTAPYE--LVTDNLLDLSHAAFIH 164
>gi|398998322|ref|ZP_10701100.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
gi|398120749|gb|EJM10402.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
Length = 358
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A +LKD + +P V+FR +G +++ C HRA PL G++ E I
Sbjct: 24 NQWYVAALGWELKDKPVGRTLLNKPVVLFRKANGEVAALEDRCCHRALPLSNGTLEESGI 83
Query: 270 QCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD--------EPPT 319
+C YHG + GKC ++P K+ + EQ+ ++WIW G EPPT
Sbjct: 84 RCGYHGLLFDERGKCVEIPGQDKIPSKAKVPAYHVSEQDQIVWIWFGSEAQPEPDCEPPT 143
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 372
+ SG + V + L+ DNL+DL+H + H T S+
Sbjct: 144 YPVHS----SGKYLFEGNVYHYNAPYQLIHDNLMDLSHLGYVHLRTIGGNASI 192
>gi|325927780|ref|ZP_08189007.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
perforans 91-118]
gi|325541855|gb|EGD13370.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
perforans 91-118]
Length = 350
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 133/334 (39%), Gaps = 55/334 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVN 265
RL W VA S+++ + EP V++R G + + ++ C HR PL +G+ +
Sbjct: 21 RLARHWHAVALSSEVSEAPFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMGTAD 78
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 321
G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+ +
Sbjct: 79 GGGVVCAYHGLRFGAGGRCNHIPASPSQNIPARMRLHTYAVAERYGLIWVCLAKPAGVSD 138
Query: 322 IPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWSVP 373
+PP GF+ ++ L+ +D+AH F HT+TFA+ VP
Sbjct: 139 ADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKREVP 198
Query: 374 SLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKPGK 415
+ TP Y Y +DM E P TI PGK
Sbjct: 199 AYTTTETPTGFNADYLSTVANYSVDMPLPDVDPTFQWLRHFEVHLPFTATLTIHFPVPGK 258
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
L ++ P S+ TRLL ++ +F + H+P F +V
Sbjct: 259 -----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLRVFE 302
Query: 476 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
ED +V Q+ + + + D+ + YR
Sbjct: 303 EDRAMVETQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|158333261|ref|YP_001514433.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
gi|158303502|gb|ABW25119.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
Length = 467
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 143/350 (40%), Gaps = 47/350 (13%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVIFRGKDGIPGCVQNT---------CAH 254
+G P + W+P+A+ DL + + + + +D + N C H
Sbjct: 15 AGGDDPNRFDWQEVWYPIAYVKDLDKEKLTTFTLL-DRDLVIWWDHNANTWRVFADQCPH 73
Query: 255 RACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-STQLRNVK------IKSLPCFEQE 306
R L G ++E G I+CPYHGW +S G+CE++P R+ + + SLP Q+
Sbjct: 74 RLARLSEGRIDEDGLIECPYHGWAFSGTGECERIPQQVSGRSAESSPRACVDSLPISIQQ 133
Query: 307 GMIWIWPGDEPPTATIPC-LLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFT 361
G+++ + G A P ++ P I++ +LP + LL+N+LD +H P+T
Sbjct: 134 GLLFAYAGQPERAALTPVPIVGPIEESPDDWIILDGFRDLPYDVLTLLENVLDPSHLPYT 193
Query: 362 HTSTFAKGWSVPSLVKFLTPASGLQGY---WDPYPIDMEFRPPCMVLSTIGISKPGKLEG 418
H + S V+ SG QG+ W+ P R + T PG +
Sbjct: 194 HHRSVGNR-SNAGPVELEVMESGKQGFYGVWEEGP-----RQGKLGTQTTTFVAPGLMWH 247
Query: 419 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRHFAEQV 473
T + P + + R+ R F+S ++ H P + H +
Sbjct: 248 DLTSSQFGRTLTVVYATPVRKGECRIFARFPFQFSSKVPAWMISHTP---TWFSHLGQNA 304
Query: 474 LNEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLWRDALE 516
+ ED ++ L QER + A + LP D+ + W++ +
Sbjct: 305 ILEDDQIFLHFQERYLERTKDSKSIAQAFYLPTRADRFVLALHQWQERFQ 354
>gi|218232265|ref|YP_002367205.1| vanillate O-demethylase oxygenase [Bacillus cereus B4264]
gi|218160222|gb|ACK60214.1| vanillate O-demethylase oxygenase subunit [Bacillus cereus B4264]
Length = 315
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 137/323 (42%), Gaps = 46/323 (14%)
Query: 218 WFPVAFSTDLKDDTMEP------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
W+ V++ D+K ++ +V++R + G + C HR L LG V G++ C
Sbjct: 13 WYAVSYVKDIKKIPVKKRIAGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLVC 72
Query: 272 PYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDE--PPTATIPCL 325
PYHGWE+ + G C ++PS + + S P E+ G+IWI+P E PP +
Sbjct: 73 PYHGWEFDSCGTCVRIPSQPNKPIPKFAHTFSYPVKEKIGLIWIYPDSEENPPEWQTFHV 132
Query: 326 LPPSGFEI---HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + F++ HA L ++++LD+AH + H T + K +
Sbjct: 133 MENTPFKLSFFHATWNAHLTRS----IESVLDIAHLAYVHKKTIGRK------TKAESTN 182
Query: 383 SGLQGYWDPYPID-----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPS 437
L+G D + +E++ P + GK E ++ Q T P
Sbjct: 183 YKLEGTLDQFIFSNGDAYLEYKFPHQWM-----LHSGKQENESFIQYIT-------FTPI 230
Query: 438 SRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNL 497
++T + M + LK+ P + + F+ +VL ED +V Q R A
Sbjct: 231 DEEETLI---MGYTGRTFLKYFPLLDQILAKFSLRVLKEDQIIVESQHPRPIPEAFKMEA 287
Query: 498 PVGYDKLGVRYR-LWRDALEKGA 519
V D V++R W L+ G+
Sbjct: 288 HVHADMAQVQFRKRWFQFLQNGS 310
>gi|187921712|ref|YP_001890744.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187720150|gb|ACD21373.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 406
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 52 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 111
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 315
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 112 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREIEGLIFVFPGD 160
>gi|349688384|ref|ZP_08899526.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
oboediens 174Bp2]
Length = 350
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 126/305 (41%), Gaps = 49/305 (16%)
Query: 212 TRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
T L W+PVA +L D + P V++R DGI + C HR PL +G +
Sbjct: 26 TILARCWYPVALVRELGDQPLGVTLLDAPLVVYRAGDGI-VIADDLCPHRGVPLSMGKGD 84
Query: 266 EGRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIW---PGDEPP 318
+ C YHG+ + GKC ++P S + +++ P E+ G+IW GD P
Sbjct: 85 GQTVACAYHGFRFGGQGKCVRVPAHPDSAIPSKLNLRTYPAVERYGLIWTCLRPEGDTPA 144
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 376
+P P +I+ + ++ G ++ +D+AH F HT TFA + VP
Sbjct: 145 IPPMPHWDDPDYQQINCPWI-DIAGFAGRQVEGFIDVAHFAFVHTDTFADPENPVVPPYK 203
Query: 377 KFLTPASGLQGYWDP----YPID------------MEFRPPCMVLSTIGISKPGKLEGQN 420
+TP G + + YPI FR ++T+ I P N
Sbjct: 204 TRITP-DGFEAEYRSSVGNYPIGKSDRGRPGFEWLRHFRVHVPFVATLEIHFP-----DN 257
Query: 421 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 480
R L ++ P S ++TR+ M +F K +P F +V ED L
Sbjct: 258 GR-----LVIMNAASPVSARQTRMFAPMCRNFD---KDLPLQDVY--DFNLKVFEEDRAL 307
Query: 481 VLGQQ 485
V Q+
Sbjct: 308 VEAQK 312
>gi|145590685|ref|YP_001152687.1| Rieske (2Fe-2S) domain-containing protein [Pyrobaculum arsenaticum
DSM 13514]
gi|145282453|gb|ABP50035.1| Rieske (2Fe-2S) domain protein [Pyrobaculum arsenaticum DSM 13514]
Length = 326
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP----STQ 291
V +R G + + C HR L LG V G+IQCPYHG+E+ GK K+P S +
Sbjct: 27 VFWRDDSGRIHALLDDCPHRRARLSLGKVVGGKIQCPYHGFEFDGSGKVIKIPALGRSAK 86
Query: 292 L-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLD 350
L +K S+P ++ ++W+W G P G E ++E + ++
Sbjct: 87 LPEYLKAFSMPVYDAYDIVWVWYGGGEPRGAPRFFEDLEGLEAYSEYSEVWGVSLPRAVE 146
Query: 351 NLLDLAHAPFTHTSTFAKG 369
N LD+ H PF H +T +G
Sbjct: 147 NQLDVFHLPFVHYNTIGRG 165
>gi|148556311|ref|YP_001263893.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501501|gb|ABQ69755.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 347
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L N W+ A+S ++ + +P + +R + G + N C HR PL+ G +
Sbjct: 4 LLNRWYAAAWSGEVAREPFMRVLFDKPVLFYRTESGDVTALSNVCPHRFAPLNRGKLFGD 63
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
I+CPYHG + DG+C + P + ++ E G+IWIW G P AT
Sbjct: 64 AIRCPYHGLRFGPDGRCVQNPIGKGLLPAKAQLTRYATIEAHGVIWIWHGPAPADAT--K 121
Query: 325 LLPPSGFEIH-----AEIVMELPIEHGLLLDNLLDLAHAPFTH 362
L+P + H + + + + L+ DNLLDL+HA F H
Sbjct: 122 LVPFDFLDEHDRYDFVDGYIAIDANYALVSDNLLDLSHAEFLH 164
>gi|427416553|ref|ZP_18906736.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
gi|425759266|gb|EKV00119.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
Length = 372
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRG--------KDGIPGCVQNTCAHRACPLHL 261
N W+ VA S++L D + +P V++R + + +++ C HR L
Sbjct: 34 NHWYVVAQSSELTDQPLGVVLWHQPIVLYRDSASADSSVRTQVVHALEDRCPHRQVRLSH 93
Query: 262 GSVNEGRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEP 317
G V +++C YHGW+++ G C ++P +L N ++++ P EQ+G IW++PGD
Sbjct: 94 GQVQGNQLECVYHGWQFNDTGACVEVPYLSAKQKLPNCRLRTYPVKEQDGFIWLFPGDAD 153
Query: 318 PTATIPCLLPPSGFEIH---AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 374
T+ + P I+ + ++ L++NL+D+ H + W+ P
Sbjct: 154 QADTLTPMGLPEWDHINYIASYTTIDTQSHFSFLIENLMDMYHGRLHDN---LQAWANPV 210
Query: 375 LVKFLTPASGLQGYWDP---YPIDMEFRPPCMVLSTIGISKPGKLE 417
L T + + ++D Y ID + + + + +P L+
Sbjct: 211 LRDIETSPTRVDAHYDAESYYKIDKIYSVGQLFIPAMRKLRPTHLD 256
>gi|239814693|ref|YP_002943603.1| Rieske (2Fe-2S) domain-containing protein [Variovorax paradoxus
S110]
gi|239801270|gb|ACS18337.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 449
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 29/186 (15%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPW-------VIFRGKDGIPGCVQNTCA 253
L GP +P L+ +W PVA +++ D ++P V+++ G G V C
Sbjct: 10 LTEVGPGKPMGDYLRRYWHPVAGASEFDDKAVKPLRILGEDLVLYKDLGGNYGLVDRRCP 69
Query: 254 HRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--------RNVKIKSLPCFEQ 305
HR + G V + ++C YHGW+Y G+C P + RN KIK+ P E+
Sbjct: 70 HRNADMSYGFVEQCGLRCSYHGWQYDQSGQCVHQPFEETLDPDARMRRNTKIKAYPVQEK 129
Query: 306 EGMIWIWPGDEPPTATIPCLLPP-------SGFEIHAEIVMELPIEHGLLLDNLLDLAHA 358
G++W + G +P LLP +GF + E+P +N +D H
Sbjct: 130 AGLLWAYMGPQPAP-----LLPDWELFNFRNGFA--QAVFAEIPCNWFQCQENSIDPVHF 182
Query: 359 PFTHTS 364
+TH +
Sbjct: 183 EWTHNN 188
>gi|444351433|ref|YP_007387577.1| Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
[Enterobacter aerogenes EA1509E]
gi|443902263|emb|CCG30037.1| Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
[Enterobacter aerogenes EA1509E]
Length = 345
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 125/303 (41%), Gaps = 46/303 (15%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA S D+ + E +I+R + + ++ C HR PL LG +
Sbjct: 21 RLAKCWHPVARSADIGPQPVKATLLDEKLIIYRLHERV-VVARDVCPHRGVPLTLGFHDA 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-SLPCF---EQEGMIWI---WPGDEPPT 319
I CPYHG + DG+C ++PS+ + + K +L C+ E G++W+ + D PP
Sbjct: 80 EGIICPYHGLRFGEDGRCNRIPSSPNQPIPAKLNLTCYAAEEHYGLVWVCLDYDADNPPR 139
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF--AKGWSVPSLVK 377
GF+ E+ G ++ LD+AH + HT TF A+ VP +
Sbjct: 140 LPTMPHWADDGFQQLTCPAFEVNGFAGRQVEGFLDVAHFAWIHTDTFADAENQQVPDYLP 199
Query: 378 FLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNTR 422
T + YW YP +R P +T+ I PG+
Sbjct: 200 EETENGFVVDYWSTVGNYPASAGYRAPEGFQWLRRFEMHLPFTATLTIHFPGE------- 252
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 482
L ++ P S + TR+ ++ +F HVP + F +V ED +V
Sbjct: 253 ---ARLVIMNAASPVSSRVTRMFAPIARNFD---LHVPVEEVY--AFNLRVFEEDRLMVE 304
Query: 483 GQQ 485
Q+
Sbjct: 305 SQR 307
>gi|323529012|ref|YP_004231164.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1001]
gi|323386014|gb|ADX58104.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1001]
Length = 402
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 48 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 107
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 315
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 108 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGD 156
>gi|170690827|ref|ZP_02881993.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
gi|170144076|gb|EDT12238.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
Length = 402
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 48 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 107
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 315
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 108 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGD 156
>gi|407709852|ref|YP_006793716.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
gi|407238535|gb|AFT88733.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
Length = 402
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 48 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 107
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 315
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 108 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGD 156
>gi|377807676|ref|YP_004978868.1| vanillate monooxygenase [Burkholderia sp. YI23]
gi|357938873|gb|AET92430.1| vanillate monooxygenase [Burkholderia sp. YI23]
Length = 351
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 123/313 (39%), Gaps = 52/313 (16%)
Query: 214 LKNFWFPVAFSTDL------KDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ A+++++ + E + +R DG + C HR PL +G +
Sbjct: 12 LKNAWYVGAWASEVTRALTPRTILNEAVLFYRKTDGSAAAIGGICPHRFAPLSMGKLVGD 71
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QC YHG ++ GKC P + K+KS P E+ +IW+W G+ P L
Sbjct: 72 EVQCGYHGLQFDCSGKCTGTPIDKKVPAAAKVKSWPLVEKYNLIWLWMGE--PERADESL 129
Query: 326 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH------------------ 362
+P + + + V + + L++DNL DL H F H
Sbjct: 130 IPDFSYLLDSNRKILSGVTHVKANYELIVDNLADLTHTHFLHGNFLHTEAVKQTQHQVMQ 189
Query: 363 --TSTFAKGW----SVPSLV-KFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 415
T+ +K W VP L+ K++ + W ++ + P + G + GK
Sbjct: 190 EGTTVHSKFWFPDGRVPPLMGKYMDDPELIVDRW----TEIRWDAPATIRLNAGATPTGK 245
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
+ + THL P + T Y + F P L R + + N
Sbjct: 246 PREEGIQAYGTHL-----LTPETEHSTHYFYAHARSFKI---DDPATDVLVREWQQVAFN 297
Query: 476 EDLRLVLGQQERM 488
E + ++ Q+++
Sbjct: 298 EQDKPMIEAQQKI 310
>gi|33603264|ref|NP_890824.1| iron-sulfur protein [Bordetella bronchiseptica RB50]
gi|412341407|ref|YP_006970162.1| iron-sulfur protein [Bordetella bronchiseptica 253]
gi|427816274|ref|ZP_18983338.1| iron-sulphur protein [Bordetella bronchiseptica 1289]
gi|33577388|emb|CAE34653.1| iron-sulphur protein [Bordetella bronchiseptica RB50]
gi|408771241|emb|CCJ56041.1| iron-sulphur protein [Bordetella bronchiseptica 253]
gi|410567274|emb|CCN24845.1| iron-sulphur protein [Bordetella bronchiseptica 1289]
Length = 453
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 22/196 (11%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG 262
P L+ FW PVA S +L + E V+FR ++G PG ++ C+HR L G
Sbjct: 34 PMGEYLRRFWQPVALSEELGELPTAVRMFGEDLVLFRARNGKPGLLEKHCSHRGTSLEFG 93
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLR-NVKIKSLPCFEQEGMIWIWPGDEP 317
E ++C YHGW + DG+ + P +QLR NV + P E G+I+ + G
Sbjct: 94 ICEENGLRCCYHGWLFGVDGQILETPGDPPDSQLRFNVCHGAYPLHEYRGIIFGYFG--- 150
Query: 318 PTATIPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHT----STFAKG 369
P A P ++I + ++ I + + +N++D AHA F HT + FA+
Sbjct: 151 PPADKPEFPVYDTYDIPGDRLVPYCITYPCNWLQVHENVMDPAHAVFLHTRISFTQFAEA 210
Query: 370 WSVPSLVKFLTPASGL 385
W + F+ +G+
Sbjct: 211 WGELPEMDFVPTPTGM 226
>gi|168000935|ref|XP_001753171.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695870|gb|EDQ82212.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 475
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 138/350 (39%), Gaps = 59/350 (16%)
Query: 218 WFPVAFSTDLKDDTMEPWVIFRGKDGIPGCV------------QNTCAHRACPLHLGSVN 265
W+PVA DL ++ P I G P + + C HR PL GS++
Sbjct: 25 WYPVAVERDLDKNSPHPATIL----GRPLAIWWDKSTSKWQVYDDQCPHRLAPLSEGSIS 80
Query: 266 E-GRIQCPYHGWEYSTD-GKCEKMPST--------QLRNVKIKSLPCFEQEGMIWIW--- 312
E G ++C YHGW + D G+C +P + + + P EQ+G++W W
Sbjct: 81 EEGHLRCSYHGWTFKGDSGECTGIPQAPKDGKQRHRSKRACVSVYPSMEQQGILWFWSDL 140
Query: 313 --------PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 364
PP P G++I + +L + L++NL+D AH F H
Sbjct: 141 SQGPVNIEAAANPPPVFSELSDPDFGYDIS---LRDLEYSYETLIENLMDPAHVNFAHHK 197
Query: 365 TFAKGWSVPSLVKFLTPASGLQGYWDPYPIDME-FRPPCMVLSTIGISKPGKL-----EG 418
S L +T G+ +E F PP L + K
Sbjct: 198 IQGNRKSAEPLNFTITTKIAPSGFKGEDEKSVETFIPPVSFLLQFTLGGNNKQHIPVSHA 257
Query: 419 QNTRQCAT---HLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV--PFMQYLWRHFAEQV 473
N+ + AT + L +C+P S K+RL++ +FA+ L + P++ ++ + V
Sbjct: 258 LNSEKKATKPKKVSLLFLCIPVSPGKSRLIWSFPRNFATFLFKITPPWVLHMTNNL---V 314
Query: 474 LNEDLRLVLGQQERMN-NGANVW----NLPVGYDKLGVRYRLWRDALEKG 518
L+ D+ L+ + R+ G W +P D +R W + G
Sbjct: 315 LDSDMYLLHLLERRLQVEGPENWFKRAYIPTTADAYVAGFRRWLNDFAGG 364
>gi|374711187|ref|ZP_09715621.1| Rieske (2Fe-2S) domain-containing protein [Sporolactobacillus
inulinus CASD]
Length = 346
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 130/308 (42%), Gaps = 61/308 (19%)
Query: 214 LKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L N+W+PVA S + D + V++R K G ++ C HR PL +G V +
Sbjct: 26 LINYWYPVAESAQVSDQPLAVTLLDVALVVYRAK-GKAVVARDLCIHRGTPLSMGWVEDD 84
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDE----PPT 319
I CPYHG+ YS DG+C +P+ + + P E+ G++W E PP
Sbjct: 85 NIVCPYHGFSYSADGQCVSIPAHPEAKISPRLCLTVYPVVERYGLVWTTLAGESDHVPP- 143
Query: 320 ATIPCLLPPSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPS 374
P G E ++ + +++ G ++ +D+AH + HT+TFA VPS
Sbjct: 144 ------FPIWGNEDYSSFLAPTIDINGSAGRQIEGFVDVAHFAWVHTATFADRNNAFVPS 197
Query: 375 L----------VKFLTPASGL-QGYWDPYPI------DMEFRPPCMVLSTIGISKPGKLE 417
+L+ S +G DP P + + PP + + + + P E
Sbjct: 198 YKVSRTPQGIHTDYLSTVSNYPKGMADPSPAAFKWLREYDIYPP--LCARLIVHFP---E 252
Query: 418 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNED 477
G+ L L+ P S +KTRL ++ +F L F ++ NED
Sbjct: 253 GK-------QLWILNAASPISARKTRLFCPIAQNFDKTLSVEDACA-----FNLKIFNED 300
Query: 478 LRLVLGQQ 485
+V Q+
Sbjct: 301 REMVENQK 308
>gi|149921995|ref|ZP_01910437.1| iron-sulfur cluster-binding protein, Rieske family [Plesiocystis
pacifica SIR-1]
gi|149817160|gb|EDM76640.1| iron-sulfur cluster-binding protein, Rieske family [Plesiocystis
pacifica SIR-1]
Length = 368
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 82/202 (40%), Gaps = 39/202 (19%)
Query: 218 WFPVAFSTDLKDDTMEP------------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
W+P+A STDL WV++R + G C+ C HR L G V
Sbjct: 25 WYPIAPSTDLPARGRRATKPLGIMRLGRRWVLWRDEAGAVACMPAACPHRGADLAQGRVR 84
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCF-EQEGMIWIWPGDEPPT 319
+G I+CPYHG+ +S G+C +P + ++ P E G+IW+W G+ PT
Sbjct: 85 QGEIECPYHGFRWSAGGECVALPCEGRGARVPAKLHVRERPIVREAHGLIWMWYGEREPT 144
Query: 320 ATIPCL--LPPSGFE--IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 375
A +P P G H E+ + ++ + DL H PF H
Sbjct: 145 AQLPWFERSPVEGRRTATHTEV---WEVSFTRTMEAMQDLHHFPFAHHG----------- 190
Query: 376 VKFLTPASGLQGYWDPYPIDME 397
L P G DPY +E
Sbjct: 191 ---LDPWRGKAARLDPYECRVE 209
>gi|410421746|ref|YP_006902195.1| iron-sulfur protein [Bordetella bronchiseptica MO149]
gi|427819786|ref|ZP_18986849.1| iron-sulphur protein [Bordetella bronchiseptica D445]
gi|427825215|ref|ZP_18992277.1| iron-sulphur protein [Bordetella bronchiseptica Bbr77]
gi|408449041|emb|CCJ60727.1| iron-sulphur protein [Bordetella bronchiseptica MO149]
gi|410570786|emb|CCN18984.1| iron-sulphur protein [Bordetella bronchiseptica D445]
gi|410590480|emb|CCN05569.1| iron-sulphur protein [Bordetella bronchiseptica Bbr77]
Length = 453
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 22/196 (11%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG 262
P L+ FW PVA S +L + E V+FR ++G PG ++ C+HR L G
Sbjct: 34 PMGEYLRRFWQPVALSEELGELPTAVRMFGEDLVLFRARNGKPGLLEKHCSHRGTSLEFG 93
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLR-NVKIKSLPCFEQEGMIWIWPGDEP 317
E ++C YHGW + DG+ + P +QLR NV + P E G+I+ + G
Sbjct: 94 ICEENGLRCCYHGWLFGVDGQILETPGDPPDSQLRFNVCHGAYPLHEYRGIIFGYFG--- 150
Query: 318 PTATIPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHT----STFAKG 369
P A P ++I + ++ I + + +N++D AHA F HT + FA+
Sbjct: 151 PPADKPEFPVYDTYDIPGDRLVPYCITYPCNWLQVHENVMDPAHAVFLHTRISFTQFAEA 210
Query: 370 WSVPSLVKFLTPASGL 385
W + F+ +G+
Sbjct: 211 WGELPEMDFVPTPTGM 226
>gi|114769251|ref|ZP_01446877.1| Rieske (2Fe-2S) protein [Rhodobacterales bacterium HTCC2255]
gi|114550168|gb|EAU53049.1| Rieske (2Fe-2S) protein [Rhodobacterales bacterium HTCC2255]
Length = 346
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMEPWV------IFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ A++ ++ + + V IF+ + G +++ C HR PL G +
Sbjct: 3 LKNAWYVAAWADEVTHNLQQITVLNQKICIFKSQSGDFVALEDACPHRKLPLSKGRIKGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPG-----DEPPTA 320
++C YHG + GKC P N K+ S P E+ G+IWIW G D
Sbjct: 63 TVECGYHGLTFDCSGKCVWAPGQGNIPSNAKVHSYPLHEKYGLIWIWMGNSALADHHDIF 122
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
I PS + I+ MEL + L+ DNLLD H + H +F +
Sbjct: 123 EIKNYNDPS-WGINRGDAMELECNYLLMCDNLLDPTHVAWVHAGSFGQA 170
>gi|206971423|ref|ZP_03232373.1| 2Fe-2S domain protein [Bacillus cereus AH1134]
gi|229178848|ref|ZP_04306208.1| hypothetical protein bcere0005_22040 [Bacillus cereus 172560W]
gi|365160845|ref|ZP_09357002.1| hypothetical protein HMPREF1014_02465 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423413757|ref|ZP_17390877.1| hypothetical protein IE1_03061 [Bacillus cereus BAG3O-2]
gi|423430459|ref|ZP_17407463.1| hypothetical protein IE7_02275 [Bacillus cereus BAG4O-1]
gi|206733408|gb|EDZ50580.1| 2Fe-2S domain protein [Bacillus cereus AH1134]
gi|228604613|gb|EEK62074.1| hypothetical protein bcere0005_22040 [Bacillus cereus 172560W]
gi|363622286|gb|EHL73455.1| hypothetical protein HMPREF1014_02465 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401100089|gb|EJQ08087.1| hypothetical protein IE1_03061 [Bacillus cereus BAG3O-2]
gi|401119386|gb|EJQ27201.1| hypothetical protein IE7_02275 [Bacillus cereus BAG4O-1]
Length = 315
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 137/323 (42%), Gaps = 46/323 (14%)
Query: 218 WFPVAFSTDLKDDTMEP------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
W+ V++ D+K ++ +V++R + G + C HR L LG V G++ C
Sbjct: 13 WYAVSYVKDIKKIPVKKRVAGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLVC 72
Query: 272 PYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDE--PPTATIPCL 325
PYHGWE+ + G C ++PS + + S P E+ G+IWI+P E PP +
Sbjct: 73 PYHGWEFDSCGTCVRIPSQPNKPIPKFAHTFSYPVKEKIGLIWIYPDSEENPPEWQTFHV 132
Query: 326 LPPSGFEI---HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + F++ HA L ++++LD+AH + H T + K +
Sbjct: 133 MENTPFKLSFFHATWNAHLTRS----IESVLDIAHLAYVHKKTIGRK------TKAESTN 182
Query: 383 SGLQGYWDPYPID-----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPS 437
L+G D + +E++ P + GK E ++ Q T P
Sbjct: 183 YKLEGTLDQFIFSNGDAYLEYKFPHQWM-----LHSGKQENESFIQYIT-------FTPI 230
Query: 438 SRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNL 497
++T + M + LK+ P + + F+ +VL ED +V Q R A
Sbjct: 231 DEEETLI---MGYTGRTFLKYFPLLDQILAKFSLRVLKEDQIIVESQHPRPIPEALKMEA 287
Query: 498 PVGYDKLGVRYR-LWRDALEKGA 519
V D V++R W L+ G+
Sbjct: 288 HVHADMAQVQFRKRWFQFLQNGS 310
>gi|167576860|ref|ZP_02369734.1| PrnD [Burkholderia thailandensis TXDOH]
Length = 360
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 95/240 (39%), Gaps = 27/240 (11%)
Query: 199 KSLNVSGPVQPYN--TRLKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQN 250
++L P+ Y+ TRL W+ S DLKD E P V +RG G +
Sbjct: 8 QALTKEHPLGAYDATTRLAASWYVAMRSDDLKDKPTELTLFGRPCVAWRGATGRAVVMDR 67
Query: 251 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL---------RNVKIKSLP 301
CAH L G V +G IQCP+H W Y G+C +P L R + +L
Sbjct: 68 HCAHLGANLADGRVKDGCIQCPFHHWRYDEQGQCVDIPGHSLAVRRLEPVPRGARQPTLV 127
Query: 302 CFEQEGMIWIWPGDEPPTATIPCLLPP---SGFEIHAEIVMELPIEHGLLLDNLLDLAHA 358
E+ G +W+W G P +P + +G +H E +++N D HA
Sbjct: 128 TAERYGYVWVWYGSPRPLHPLPDIAAADVDNGDFMHLHFAFETTTAVLRIVENFYDAQHA 187
Query: 359 PFTHT---STFA----KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 411
H S F W V+ L A G + +D F P M+ +G++
Sbjct: 188 NPVHALPISAFELKLFDDWRQWPEVESLARAGAWFGAGIDFTVDRYFGPLGMLSRALGLN 247
>gi|428201421|ref|YP_007080010.1| ring-hydroxylating dioxygenase, large terminal subunit [Pleurocapsa
sp. PCC 7327]
gi|427978853|gb|AFY76453.1| ring-hydroxylating dioxygenase, large terminal subunit [Pleurocapsa
sp. PCC 7327]
Length = 356
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ VA ST+++D+ + + V++R K G +++ C HR L G V +
Sbjct: 21 NHWYVVARSTEVRDEPIGVTLWHQAIVLYRDKTGKVHALEDRCPHRQVKLSHGKVIGNEL 80
Query: 270 QCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPP---TATI 322
+C YHGW ++ +G C +P + +L N KI+ P E +G IW++PGD +
Sbjct: 81 ECAYHGWRFNWEGNCVAVPYLASNQKLPNCKIRRYPVRELDGFIWLFPGDLDKLDRNSIQ 140
Query: 323 PCLLPPSGF--EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 380
P +P I ++E + L++NL+D+ H H + W+ L
Sbjct: 141 PMGVPEWNHLNYIATVSIIECKGHYSFLIENLMDMYHG---HLHDDYQAWASAVLKDLNI 197
Query: 381 PASGLQGYWDP---YPID 395
+ Y++ Y ID
Sbjct: 198 DNKRVNAYYEAQSYYKID 215
>gi|146343428|ref|YP_001208476.1| dioxygenase phtalate dioxygenase oxygenase subunit [Bradyrhizobium
sp. ORS 278]
gi|146196234|emb|CAL80261.1| putative dioxygenase; putative phtalate dioxygenase oxygenase
subunit [Bradyrhizobium sp. ORS 278]
Length = 452
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTCAHRA 256
GP P ++ +W P A +L + + +V+F+ + G G + C HR
Sbjct: 14 GPDAPAGKLMRMYWQPAALVDELAGERPVRAVKLLGQDFVLFKDEQGRYGLLDRDCPHRG 73
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 311
L G + G ++C +HGW + DG C + P S +NVK +S P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCAFHGWLFDVDGACLETPAEPAGSPLCKNVKQRSYPVVEKGGILWA 133
Query: 312 WPGD--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
W G+ P + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGEGAAPAFPDLDCFTAPDAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|33594581|ref|NP_882225.1| (Fe-S)-binding protein [Bordetella pertussis Tohama I]
gi|384205878|ref|YP_005591617.1| iron-sulfur protein [Bordetella pertussis CS]
gi|33564657|emb|CAE43979.1| iron-sulphur protein [Bordetella pertussis Tohama I]
gi|332383992|gb|AEE68839.1| iron-sulfur protein [Bordetella pertussis CS]
Length = 453
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 22/196 (11%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG 262
P L+ FW PVA S +L + E V+FR ++G PG ++ C+HR L G
Sbjct: 34 PMGEYLRRFWQPVALSEELGELPTAVRMFGENLVLFRARNGKPGLLEKHCSHRGTSLEFG 93
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLR-NVKIKSLPCFEQEGMIWIWPGDEP 317
E ++C YHGW + DG+ + P +QLR NV + P E G+I+ + G
Sbjct: 94 ICEENGLRCCYHGWLFGVDGQILETPGDPPDSQLRFNVCHGAYPLHEYRGIIFGYFG--- 150
Query: 318 PTATIPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHT----STFAKG 369
P A P ++I + ++ I + + +N++D AHA F HT + FA+
Sbjct: 151 PPADKPEFPVYDTYDIPGDRLVPYCITYPCNWLQVHENVMDPAHAVFLHTRISFTQFAEA 210
Query: 370 WSVPSLVKFLTPASGL 385
W + F+ +G+
Sbjct: 211 WGELPEMDFVPTPTGM 226
>gi|238026710|ref|YP_002910941.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
glumae BGR1]
gi|237875904|gb|ACR28237.1| Iron-sulfur cluster-binding protein, Rieske family [Burkholderia
glumae BGR1]
Length = 345
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 128/306 (41%), Gaps = 34/306 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+ FW+PVA + D+ D + E ++R + G V++ C HR+ L G V++G
Sbjct: 9 LRRFWYPVARAVDVTDAPLAVTLLGEALALWRTGENEFGVVKDKCPHRSARLSGGWVDQG 68
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLR----NVKIKSLPCFEQEGMIWIWPGDEP--PTAT 321
++ CPYHGW Y+ G C ++P + + + C + G IW+ DEP
Sbjct: 69 KLVCPYHGWTYNGVGACVRIPQMPQKKPSEKIVVDHYRCKTKYGYIWV-ALDEPIHDIPD 127
Query: 322 IPCLLPPSGFEIHAEIVMELPIEHGL-LLDNLLDLAHAPFTHTSTFAKG-WSVPSLVKFL 379
P + IH ME+ GL +L+N LD +H F H TF P+ ++
Sbjct: 128 FPEAADAGFYRIHE--FMEVWNCSGLRILENGLDNSHFAFVHRKTFGLAEMPEPAPARYE 185
Query: 380 TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSR 439
+G Y D+ P + +GI A ++ + P+
Sbjct: 186 DTETGFNMY-----SDVLVNNPGLQKDNLGIGSEQTTRYMEHNWFAPFGRRMRIQYPNGL 240
Query: 440 KKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANV----- 494
T + + ++ L F+Q+ +R+ A++ N DL ++ + N V
Sbjct: 241 VHTIITWATPINDRQSL----FVQFAFRNDADR--NPDLDDIVAWDRAVTNEDRVILETT 294
Query: 495 -WNLPV 499
W+ P+
Sbjct: 295 DWDTPL 300
>gi|326794461|ref|YP_004312281.1| Vanillate monooxygenase [Marinomonas mediterranea MMB-1]
gi|326545225|gb|ADZ90445.1| Vanillate monooxygenase [Marinomonas mediterranea MMB-1]
Length = 372
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 98/240 (40%), Gaps = 36/240 (15%)
Query: 212 TRLKNFWFPVAFSTDL-------KDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
T KN W+ A S ++ + E +R K V + C HR L LG V
Sbjct: 5 TYPKNAWYVAAMSEEIGLEKPLGRKVCGERIAFYRPKPNEVAAVLDFCPHRGAALSLGYV 64
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGD--EPPTAT 321
+G + C YHG + DGK + MP +++ +K+ E G IW+WPGD + +
Sbjct: 65 EDGLLVCGYHGLKIGEDGKTKAMPLQRVQGFPCMKAYAVEELYGFIWVWPGDQSQADASL 124
Query: 322 IPCL-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK--- 377
IP L S + + + ++ L++DNL+DL H + H S+ + S V
Sbjct: 125 IPRLEWAESDDWAYGGGLYHIKCDYRLMIDNLMDLTHETYVHASSIGQKEIDESPVSTQS 184
Query: 378 ------------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 415
F A G D P+D F PP V+ +G++ GK
Sbjct: 185 EGDEVITSRYMENIMAPPFWQAALRANGLADDVPVDRWQRCRFTPPSNVMIDVGVAHAGK 244
>gi|84683562|ref|ZP_01011465.1| Rieske (2Fe-2S) region protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84668305|gb|EAQ14772.1| Rieske (2Fe-2S) region protein [Maritimibacter alkaliphilus
HTCC2654]
Length = 429
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 19/179 (10%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQNTCAHRACPL 259
P ++ +W P+A S +L + +P V+FR +G G +Q +C HR L
Sbjct: 18 PMGKVMRRYWHPIALSEELPEPDCKPIRAELLGEKLVVFRDSEGKVGVLQESCMHRGASL 77
Query: 260 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-SLPCF---EQEGMIWIW--- 312
LG V +G ++C YHGW+++ DG P+ VK + PCF E+ G+IW
Sbjct: 78 ALGRVEDGGVRCLYHGWKFAVDGTILDTPNNPDPRVKQRLKQPCFPVREEGGLIWTVVGA 137
Query: 313 -PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 370
G+EPP + P+ E + + + + L + D +H H + + GW
Sbjct: 138 KKGEEPPFRRYSFMDAPA--EHRLALRINVKCNYLQLWEGGADSSHVGILHAESASPGW 194
>gi|319782309|ref|YP_004141785.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168197|gb|ADV11735.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 346
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ A+ ++ D + E V++R DG+ +++ C HR PL +G +
Sbjct: 3 LRNCWYVAAWDHEVADRLVPTRILGEDIVLYRRTDGVVAALEDACPHRKLPLSMGRIKGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQ-LRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
++C YHG + + G C ++P + + +V ++S P E+ G++WIW G+ P L
Sbjct: 63 TVECGYHGLTFDSTGTCTRVPGAEKIPHVACVRSYPIAERYGLLWIWMGEA--AKADPAL 120
Query: 326 L------PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
+ + ++ M L + + DNLLD +H + H S+F
Sbjct: 121 IFAVDHWGDPAWGVNRGESMALDCNYLYMTDNLLDPSHVSWVHQSSFG 168
>gi|91782304|ref|YP_557510.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia xenovorans
LB400]
gi|91686258|gb|ABE29458.1| Putative rieske (2Fe-2S) domain protein [Burkholderia xenovorans
LB400]
Length = 433
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTC 252
L GP P T ++ +W P A S++LK D E + FR +G G + + C
Sbjct: 7 LTCVGPGTPMGTLMRQYWVPAAKSSELKRDGDPMRLMLLGEKLIAFRDSEGRVGVLDHRC 66
Query: 253 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEG 307
HR L LG E I+C YHGW++ G+C MPS V K+ E+ G
Sbjct: 67 PHRCASLFLGRNEESGIRCVYHGWKFDVAGRCVDMPSVPPHQDFKDKVHAKAFRTAERNG 126
Query: 308 MIWIWPGD--EPP 318
++W++ GD EPP
Sbjct: 127 LVWVYMGDAAEPP 139
>gi|416952092|ref|ZP_11935501.1| Rieske (2Fe-2S) iron-sulfur domain [Burkholderia sp. TJI49]
gi|325523128|gb|EGD01529.1| Rieske (2Fe-2S) iron-sulfur domain [Burkholderia sp. TJI49]
Length = 349
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 214 LKNFWFPVAFSTD----LKDDTM--EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+N W+ + D L TM E V++R DG P +++ C HR PL +G +
Sbjct: 3 LRNAWYVAGWDKDVTRALTPVTMLGERIVLYRKADGTPVALEDACPHRMLPLSMGRLTGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEP---PTA-- 320
++C YHG + G C + P + ++ P E+ G++W+W GDE P A
Sbjct: 63 DVECGYHGLTFDCSGACVRAPGSARIPAQAVVRRYPVAERYGLVWVWMGDEAAADPDALL 122
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 380
TI P+ + ++ M + + + DNLLD +H + H S+F +K
Sbjct: 123 TIDEWDDPA-WGLNRGDAMTVDCHYLYMTDNLLDPSHVAWVHRSSFGNAACESEPLKTSA 181
Query: 381 PASGL 385
A+G+
Sbjct: 182 AANGV 186
>gi|410686798|ref|YP_006963105.1| putative vanillate O-demethylase oxygenase chain A [Variovorax sp.
DB1]
gi|388482519|gb|AFK33042.1| putative vanillate O-demethylase oxygenase chain A [Variovorax sp.
DB1]
Length = 358
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
KNFW+ A ++ + +P V FR DG + + C+HR L LG +
Sbjct: 4 KNFWYVGAMKHEVGRHLLARTLLEQPIVFFRRIDGSVAALADRCSHRRISLSLGRLIGDE 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QC YHG ++ DG C +P Q R + ++S P E++ +W WPGD PT L
Sbjct: 64 VQCGYHGLSFAGDGSCTGIPG-QARVPPSACVRSYPVVERDEFVWFWPGD--PTLADEAL 120
Query: 326 LPPSGFEIHAEIVMELPIEHGLL-------LDNLLDLAHAPFTHTST 365
+P + + P E L+ ++N+LDL+H + H T
Sbjct: 121 VPDYSEICSSGRFVGRPAEPLLVEAPCLFNIENVLDLSHVTYAHQET 167
>gi|423119627|ref|ZP_17107311.1| hypothetical protein HMPREF9690_01633 [Klebsiella oxytoca 10-5246]
gi|376398281|gb|EHT10908.1| hypothetical protein HMPREF9690_01633 [Klebsiella oxytoca 10-5246]
Length = 345
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 130/308 (42%), Gaps = 49/308 (15%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA + D+ + E VI+R K + ++ C HR PL LG +
Sbjct: 21 RLARCWHPVARAEDIGAAPVKAVLLDEQLVIYRVKGQV-VVARDVCPHRGVPLTLGFHDG 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-SLPCF---EQEGMIWI---WPGDEP-P 318
I CPYHG + DG C ++PS+ R V K +L C+ E+ G+IW + + P P
Sbjct: 80 EGIVCPYHGLRFGEDGLCNRIPSSPDRPVPAKLNLTCYAVEERYGLIWTCLAFDAENPMP 139
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 376
T+P GF+ E+ G ++ LD+AH + HT TFA VP +
Sbjct: 140 LPTLP-HWDDEGFQQINCPGFEVNGFAGRQVEGFLDVAHFAWIHTDTFADPDNQLVPDYI 198
Query: 377 KFLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNT 421
TP YW YP EFR P +T+ I PG+
Sbjct: 199 PQETPFGFTADYWSSVGNYPASSEFRAPDGFQWLRHFELHLPFTATLTIHFPGE------ 252
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
L ++ P S + TR+ ++ +F HVP + F +V ED +V
Sbjct: 253 ----ARLVIMNAASPVSSRVTRMFAPIARNFD---LHVPVEEV--HAFNLRVFEEDRLMV 303
Query: 482 LGQQ-ERM 488
Q+ ER+
Sbjct: 304 ETQRPERL 311
>gi|456352367|dbj|BAM86812.1| putative dioxygenase [Agromonas oligotrophica S58]
Length = 452
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTCAHRA 256
GP P ++ +W P A + +L + + +V+F+ + G G + C HR
Sbjct: 14 GPTAPAGKLMRMYWQPAALADELVGERPVRAVKLLGQHFVLFKDEQGRYGLLDRDCPHRG 73
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 311
L G + +G ++C +HGW + +G+C + P S +N++ +S P E+ G++W
Sbjct: 74 ADLAFGRLEQGGLRCSFHGWLFDVEGQCLETPAEPPGSPLCKNIRQRSYPVVEKGGILWA 133
Query: 312 WPGD--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
W GD P + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGDGAAPAFPDLDCFTAPDTYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|187921686|ref|YP_001890718.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187720124|gb|ACD21347.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 364
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 14/185 (7%)
Query: 197 PRKSLNVSGPVQPY-NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQ 249
P + + + P+Q Y + L+N+W+PVA S + D + + V++R K+G ++
Sbjct: 4 PNTNQDAADPIQSYLDKGLRNYWYPVAPSWQVGDAPVGITRLGDQIVLWRDKEGQVRALE 63
Query: 250 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ---LRNVK-IKSLPCFEQ 305
+ C HR L LG G + C YHG E G+ K+P+ L K +KS P E
Sbjct: 64 DRCPHRGARLSLGWNLGGSVACWYHGIEIDGSGEVTKVPAVSNCPLEGQKCVKSYPVEEH 123
Query: 306 EGMIWIWPGDEPPTATIPCLLPPS--GFEIHAEIVM-ELPIEHGLLLDNLLDLAHAPFTH 362
G I++W GDE P +LP G E + + M + +DN++D H + H
Sbjct: 124 AGAIFLWFGDEAHKEPTPLVLPEELVGEEYASFLCMSHWKCNYQYAIDNVMDPMHGAYLH 183
Query: 363 TSTFA 367
++ +
Sbjct: 184 ATSHS 188
>gi|359462313|ref|ZP_09250876.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 488
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 142/350 (40%), Gaps = 47/350 (13%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVIFRGKDGIPGCVQNT---------CAH 254
+G P + W+P+A+ DL + + + + +D + N C H
Sbjct: 36 AGGNDPNRFDWQEVWYPIAYVKDLDKEKLTTFTLL-DRDLVIWWDHNANTWRVFADQCPH 94
Query: 255 RACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-STQLRNVK------IKSLPCFEQE 306
R L G ++E G I+CPYHGW +S G CE++P R+ + + SLP Q+
Sbjct: 95 RLARLSEGRIDEDGLIECPYHGWAFSGTGDCERIPQQVSGRSAESSPRACVDSLPISIQQ 154
Query: 307 GMIWIWPGDEPPTATIPC-LLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFT 361
G+++ + G A P ++ P I++ +LP + LL+N+LD +H P+T
Sbjct: 155 GLLFAYAGQPERAALTPVPIVGPIEESPDDWIILDGFRDLPYDVLTLLENVLDPSHLPYT 214
Query: 362 HTSTFAKGWSVPSLVKFLTPASGLQGY---WDPYPIDMEFRPPCMVLSTIGISKPGKLEG 418
H + S V+ SG QG+ W+ P R + T PG +
Sbjct: 215 HHRSVGNR-SNAGPVELEVMESGKQGFYGVWEEGP-----RQGKLGTQTTTFVAPGLMWH 268
Query: 419 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRHFAEQV 473
T + P + + R+ R F+S ++ H P + H +
Sbjct: 269 DLTSSQFGRTLTVVYATPVRKGECRIFARFPFQFSSKVPAWMISHTP---TWFSHLGQNA 325
Query: 474 LNEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLWRDALE 516
+ ED ++ L QER + A + LP D+ + W++ +
Sbjct: 326 ILEDDQIFLHFQERYLERTKDSKSIAQAFYLPTRADRFVLALHQWQERFQ 375
>gi|294083911|ref|YP_003550668.1| Rieske (2Fe-2S) protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663483|gb|ADE38584.1| Rieske (2Fe-2S) protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 347
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L + W+ +S+D + E VIFR G+ +++ C HR PL G + +
Sbjct: 9 LFDSWYVAGWSSDFEHSLTPLTILGEHVVIFRTAKGVAVALEDACPHRKLPLSHGRLQDD 68
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLR--NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
R++C YHG + G C P+ Q +V +KS P ++ G++WIW G P A +
Sbjct: 69 RVECGYHGLTFDCSGHCVHAPTQQNSPPDVSVKSYPVEDRYGLLWIWMG-APEAANTDEI 127
Query: 326 LPPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
++ A M++ + + DNLLD +H + H S+FA
Sbjct: 128 FRIENYDNPAWGKTRGGSMDVACHYLYVTDNLLDPSHVAWVHVSSFA 174
>gi|209515974|ref|ZP_03264835.1| Rieske (2Fe-2S) domain protein [Burkholderia sp. H160]
gi|209503632|gb|EEA03627.1| Rieske (2Fe-2S) domain protein [Burkholderia sp. H160]
Length = 416
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+ W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 62 DHWYPLAWSHEVKRGKTLGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 121
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIP 323
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD A P
Sbjct: 122 IRCGYHGWTYDCAGKCVDVPYLGRERLPNGVRSYPCHEVEGLIFVFPGDAALAAERP 178
>gi|408414289|ref|YP_006624996.1| iron-sulfur protein [Bordetella pertussis 18323]
gi|401776459|emb|CCJ61651.1| iron-sulphur protein [Bordetella pertussis 18323]
Length = 453
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 23/195 (11%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG 262
P L+ FW PVA S +L + E V+FR ++G PG ++ C+HR L G
Sbjct: 34 PMGEYLRRFWQPVALSEELGELPTAVRMFGENLVLFRARNGKPGLLEKHCSHRGTSLEFG 93
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLR-NVKIKSLPCFEQEGMIWIWPGDEP 317
E ++C YHGW + DG+ + P +QLR NV + P E G+I+ + G
Sbjct: 94 ICEENGLRCCYHGWLFGVDGQILETPGDPPDSQLRFNVCHGAYPLHEYRGIIFGYFG--- 150
Query: 318 PTATIPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHT----STFAKG 369
P A P ++I + ++ I + + +N++D AHA F HT + FA+
Sbjct: 151 PPADKPEFPVYDTYDIPGDRLVPYCITYPCNWLQVHENVMDPAHAVFLHTRISFTQFAEA 210
Query: 370 WS-VPSLVKFLTPAS 383
W +P + TP S
Sbjct: 211 WGELPEMDFVPTPTS 225
>gi|220908321|ref|YP_002483632.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7425]
gi|219864932|gb|ACL45271.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7425]
Length = 477
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 141/355 (39%), Gaps = 45/355 (12%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVIFRGKDGIPG---------CVQNTCAH 254
+G P W+PV + DL P+ + G+D + + C H
Sbjct: 20 AGGSDPDRFNWHEAWYPVHYVVDLDRTQPTPFTLL-GQDLVLWWDRQAESWRAFADQCPH 78
Query: 255 RACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQE 306
R PL G + E G ++CPYHGW ++ +G+C+++P + + + S P ++
Sbjct: 79 RLAPLSEGRIAEDGLLECPYHGWAFTGEGQCDRIPQQFPGQMAHTSKRACVTSFPTTVRQ 138
Query: 307 GMIWIWPGDEPPTA---TIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 359
G+++++ GD P A ++P + P + + +LP + LL+N+LD +H P
Sbjct: 139 GLLFVYAGD-PANADRVSVPIIAALEESPQDW-VCLNTFRDLPYDALTLLENVLDSSHVP 196
Query: 360 FTHTSTFA-KGWSVPSLVKFLT-PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE 417
FTH + + + P + L G QG+W D R +T I+
Sbjct: 197 FTHHRSVGNRANAAPVELDMLEFGKQGFQGFWQ----DGPRRGTLGSQTTTFIAPALMWH 252
Query: 418 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLN 475
T+Q L ++ P + + RL R F S L + + H +
Sbjct: 253 DLTTKQFGRTLTAVYAT-PIRKGECRLFARFPFKFGSRLPALLIKLTPRWYAHIGNNNVL 311
Query: 476 EDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLP 523
ED ++ L QER N A LP D R W + E A P
Sbjct: 312 EDDQIFLHLQERYLEAQGGSANFAKACYLPTRADTYVTALRKWVN--EYAANPFP 364
>gi|163745312|ref|ZP_02152672.1| vanillate O-demethylase oxygenase, putative [Oceanibulbus indolifex
HEL-45]
gi|161382130|gb|EDQ06539.1| vanillate O-demethylase oxygenase, putative [Oceanibulbus indolifex
HEL-45]
Length = 346
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 26/191 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ A+ ++ + E +FR + G +++ C HR PL G +
Sbjct: 3 LKNAWYVAAWDHEVTRELQQITVLGEKICVFRSEAGELVGLEDACPHRKLPLSKGRIKGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
++C YHG + G+C P T N K+ + P E+ G++WIW G+ P L
Sbjct: 63 TVECGYHGLTFDCAGQCVWAPGTGRIPSNAKVHAYPLHEKYGLVWIWMGN-------PAL 115
Query: 326 LPPSG-FE----------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 374
PS FE I+ MEL + L+ DNLLD H + H S+FA + +
Sbjct: 116 ADPSDIFEIENYDNPDWGINRGEAMELDCNYLLMCDNLLDPTHVAWVHQSSFAAAATKDT 175
Query: 375 LVKFLTPASGL 385
++ G+
Sbjct: 176 PLRITKTEEGI 186
>gi|388544262|ref|ZP_10147550.1| vanillate O-demethylase oxygenase subunit [Pseudomonas sp. M47T1]
gi|388277445|gb|EIK97019.1| vanillate O-demethylase oxygenase subunit [Pseudomonas sp. M47T1]
Length = 347
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 112/273 (41%), Gaps = 51/273 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L W+PVA DL D + P V+FR GI ++ C HR PL +G V
Sbjct: 26 LAQHWYPVARVQDLTDKPLAAMLLDVPLVLFRTSAGI-TIARDICPHRGVPLSMGWVEHD 84
Query: 268 RIQCPYHGWEYSTDGKCEKMPS----TQLR-NVKIKSLPCFEQEGMIWI-WPGDEPPTAT 321
I CPYHG Y DG+C K+P+ T++ +K+ E+ G++W EP
Sbjct: 85 EIVCPYHGLHYGADGRCSKIPAQPDLTRISPRFTLKTFAAVERFGLVWTSLHSLEPDLPQ 144
Query: 322 IPCLLPPSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 376
+P P H I+ +++ G L+ +D+AH + H FA VPS
Sbjct: 145 LPTWDDPD----HQAILPPWVDIAGSSGRQLEGFIDVAHFAWVHHEAFADRDNPVVPSYD 200
Query: 377 KFLTPASGLQGYW---DPYPIDME------FR--------PPCMVLSTIGISKPGKLEGQ 419
LT YW YP ++ FR PP + T+ G+L
Sbjct: 201 TQLTDYGLRTEYWSGVSNYPKALQHLEPEGFRWLRVFDVYPPFSAVLTVHFPDDGRL--- 257
Query: 420 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 452
C L+ P S +KTRL ++ +F
Sbjct: 258 ----CI-----LNAACPMSARKTRLFVPLTRNF 281
>gi|397734225|ref|ZP_10500935.1| rieske domain protein [Rhodococcus sp. JVH1]
gi|396929893|gb|EJI97092.1| rieske domain protein [Rhodococcus sp. JVH1]
Length = 356
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 48/287 (16%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG-- 262
+T +N W+ A+ ++ + EP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTICEEPILFWRTEAGEAVAMSDRCVHRRYPLSEAPS 61
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPT 319
++ ++ C YHG+ Y +DG C +P R +++S EQ+ +W+W D + P
Sbjct: 62 RLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLRSYQVVEQDSFVWVWIADPQNPQ 121
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH------------ 362
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 122 QGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAET 181
Query: 363 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL-----S 406
T+ + +V + + F + ++G++G + D+E+ PPC+ L +
Sbjct: 182 PITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRIA 240
Query: 407 TIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 241 PIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|296115924|ref|ZP_06834547.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
hansenii ATCC 23769]
gi|295977496|gb|EFG84251.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
hansenii ATCC 23769]
Length = 354
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 130/311 (41%), Gaps = 32/311 (10%)
Query: 196 LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQ 249
LPR N++ V +N L W+PVA DL + P VI+R +G
Sbjct: 17 LPR---NMTFDVDDWNI-LARCWYPVALVRDLGAQPLSMTLLDAPLVIYRAGEGDIVIAD 72
Query: 250 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQ 305
+ C HR PL +G + + C YHG+ + G+C ++P S + +++ P E+
Sbjct: 73 DLCPHRGVPLSMGKGDGQTVACAYHGFRFGAQGRCVRVPAHPDSAIPSKLNLRTYPVVER 132
Query: 306 EGMIWIW---PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
G+IW G+ P +P PS +I+ + ++ G ++ +D+AH F H
Sbjct: 133 YGLIWTCLRPEGEMPEIPPMPHWDDPSYQQINCPWI-DIAGFAGRQVEGFIDVAHFAFVH 191
Query: 363 TSTFA--KGWSVPSLVKFLTPASGLQGYWDP----YPIDM--EFRPPCMVLSTIGISKPG 414
T TFA + VP LTP G + + YPI + RP L + P
Sbjct: 192 TDTFADPENPVVPPYRTRLTP-DGFEAEYRSNVGNYPIGVTDRGRPGFEWLRHFRVHVPF 250
Query: 415 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
+ L ++ P S +KTR+ M +F K +P F +V
Sbjct: 251 TATLEIHFPDNGRLVIMNAASPVSARKTRMFAPMCRNFD---KELPLQDVY--DFNLRVF 305
Query: 475 NEDLRLVLGQQ 485
ED LV Q+
Sbjct: 306 EEDRALVEAQR 316
>gi|375101692|ref|ZP_09747955.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora cyanea NA-134]
gi|374662424|gb|EHR62302.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora cyanea NA-134]
Length = 377
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 120/299 (40%), Gaps = 59/299 (19%)
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
P ++R +G + + C HR PL G + +QCPYHG Y++ G+C MP+ +
Sbjct: 52 PLALWRNTEGRAVALADACWHRLAPLSKGKILGDELQCPYHGLRYNSTGRCTGMPAQETI 111
Query: 294 N--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP-----------SGFEIHAEIVME 340
N + + P E+ +W+W G+ P P +P G IHA+
Sbjct: 112 NPSAMVPAYPVVERYRYVWVWVGE--PDLADPAAVPDMHQMDDPAWAGDGETIHAD---- 165
Query: 341 LPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------GWSVPSLVKFL----TPAS 383
+ L+LDNL+DL H F H S+ + G +V ++ +++ P
Sbjct: 166 --CNYQLVLDNLMDLTHEEFVHASSIGQEELSEAEFDVVHEGNTV-TVTRWMRDIDAPPF 222
Query: 384 GLQGYWDPYP-----ID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVC 434
L+ D +P +D + F P + +G++K G + R + + ++
Sbjct: 223 WLKNMRDKFPGFEGKVDRWQIIRFEAPSTICIDVGVAKAGTGAPEGDRSQGVNGYVMNTI 282
Query: 435 LPSSRKKTRLLY----RMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 489
P + + + LD ++ + R V ED ++ QQ ++
Sbjct: 283 TPETHRSCHYFWAFMRNYRLDSQTITTQL-------RQSVHGVFAEDEDMLRAQQSAID 334
>gi|424859149|ref|ZP_18283163.1| vanillate monooxygenase subunit [Rhodococcus opacus PD630]
gi|356661658|gb|EHI41969.1| vanillate monooxygenase subunit [Rhodococcus opacus PD630]
Length = 357
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 48/287 (16%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG-- 262
+T +N W+ A+ ++ + EP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTICEEPILFWRTEAGEAVAMSDRCVHRRYPLSEAPS 61
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPT 319
++ ++ C YHG+ Y +DG C +P R +++S EQ+ +W+W D + P
Sbjct: 62 RLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLRSYQVVEQDSFVWVWIADPQNPE 121
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH------------ 362
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 122 QGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAET 181
Query: 363 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL-----S 406
T+ + +V + + F + ++G++G + D+E+ PPC+ L +
Sbjct: 182 PITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRIA 240
Query: 407 TIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 241 PIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|407713671|ref|YP_006834236.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407235855|gb|AFT86054.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 357
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 212 TRLKNFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
T L+N W+ A+ +++ D E V+FR + + + C HR PL +G +
Sbjct: 2 TYLRNCWYVAAWDSEVLSDKPLARTLLDEKIVLFRDANNTAVALADRCPHRFAPLSMGEL 61
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPT-- 319
+G ++C YHG ++ +DGKC P +++ P E+ +IWIW GD+
Sbjct: 62 CQGNVRCSYHGLQFGSDGKCVHNPHGNGIIPATAVVRAYPVVERYSVIWIWMGDKSKADD 121
Query: 320 ATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
A IP L P + + A+ + + L DN++DL+H F H T
Sbjct: 122 ALIPEYRGLDPETAYV--AKDYLYAKANYVLETDNIMDLSHIEFLHPETLG 170
>gi|365897365|ref|ZP_09435373.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. STM 3843]
gi|365421867|emb|CCE07915.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. STM 3843]
Length = 452
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTCAHRA 256
GP P ++ +W P A +L+ + E V+FR + G G + CAHR
Sbjct: 14 GPNDPCGKLMRQYWQPAALVDELQGERPVRPVRLLGENLVLFRDEQGRYGLIDRHCAHRG 73
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 311
L G + G ++C +HGW + G+C P S N++ +S P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCSFHGWLFDVTGQCLDTPAEPKGSNLCANIRQRSYPVVEKSGIVWA 133
Query: 312 WPGDEPPTA--TIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
+ G+ P A I C P+ F+ H E +E G +D AHA + H
Sbjct: 134 YLGEGTPPAFPEIDCFTAPASHTFAFKGHMECNWLQALEVG------IDPAHASYLH 184
>gi|86611381|gb|ABD14374.1| vanillate monooxygenase oxygenase subunit [Rhodococcus sp. DK17]
Length = 356
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 48/287 (16%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG-- 262
+T +N W+ A+ ++ + EP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTICEEPILFWRTEAGEAVAMSDRCVHRRYPLSEAPS 61
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPT 319
++ ++ C YHG+ Y +DG C +P R +++S EQ+ +W+W D + P
Sbjct: 62 RLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLRSYQVVEQDSFVWVWIADPQNPQ 121
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH------------ 362
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 122 QGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAET 181
Query: 363 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL-----S 406
T+ + +V + + F + ++G++G + D+E+ PPC+ L +
Sbjct: 182 PITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRIA 240
Query: 407 TIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 241 PIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|325969786|ref|YP_004245978.1| Rieske (2Fe-2S) domain-containing protein [Vulcanisaeta moutnovskia
768-28]
gi|323708989|gb|ADY02476.1| Rieske (2Fe-2S) domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 333
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 13/143 (9%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----ST 290
V +R K G + + C HR L LG V +G IQCPYHG+E+ G+ K+P S
Sbjct: 27 VFWRDKSGKVNALLDDCPHRHAKLSLGKVVDGNIQCPYHGFEFDGSGRTVKIPALGKASE 86
Query: 291 QLRNVKIKSLPCFEQEGMIWIWPGD---EPPTATIPCLLPPSGFEIHAEI-VMELPIEHG 346
+ ++ S+P +E +IWIW G+ P L S + ++E+ + LP
Sbjct: 87 VPKYLRAFSIPTYETYDIIWIWYGNGDLSKPPRFFDDLDELSTYSEYSEVWSVSLPRA-- 144
Query: 347 LLLDNLLDLAHAPFTHTSTFAKG 369
++N LD+ H PF H +T +G
Sbjct: 145 --VENQLDVFHLPFVHYNTIGRG 165
>gi|428300003|ref|YP_007138309.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Calothrix
sp. PCC 6303]
gi|428236547|gb|AFZ02337.1| Rieske (2Fe-2S) iron-sulfur domain protein [Calothrix sp. PCC 6303]
Length = 340
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTMEPWVIFRGK-------DGIPGCVQNTCAHRACPLHLGSVNE 266
+ FW+PV L + + + K G P V++ C HR+ L LG V
Sbjct: 9 FRRFWYPVVPINLLSKSSPHAFTLLNQKIVLWLDSQGNPAAVKDRCCHRSAQLSLGKVVN 68
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL----RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
G I CPYHGW +++ G C +P N ++ S C E+ G W+ D P I
Sbjct: 69 GDIVCPYHGWNFNSTGTCTHVPQLNNGMIPSNYQVTSYACVERYGYAWVCLED--PLCDI 126
Query: 323 PCLLPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P + FE IH E +++N D AH F HT+TF
Sbjct: 127 PNIPEARNFEYRLIH-EFYEPWNCAGLRVMENEFDTAHPTFVHTTTFGN 174
>gi|258512017|ref|YP_003185451.1| Rieske (2Fe-2S) domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478743|gb|ACV59062.1| Rieske (2Fe-2S) iron-sulphur domain protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 327
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 126/331 (38%), Gaps = 56/331 (16%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDD-------TMEPWVIFRGKDGIPGCVQNTCAHRAC 257
PV + W+ V FS L V+FR G + C HR
Sbjct: 6 APVPSEDRVFPATWYAVCFSAQLTRRRPLAARVAGRDLVLFRDASGHVRALSRYCTHRGA 65
Query: 258 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWP 313
L LG G + C YHGW++ DG+C +P+ R + ++ P E+ G+ W++
Sbjct: 66 DLALGRAEGGHLACAYHGWQFQGDGRCTLIPAHPDRPIPDFAHNRAYPACERGGIAWVYL 125
Query: 314 GDE--PPTATIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 370
G E PP + L + + E V + + +++++LD+AH F H T G
Sbjct: 126 GGETSPPEPRVFSELTDGSYRLVPYEDVWQAHLTR--VVESVLDVAHLAFVHRKTI--GR 181
Query: 371 SVPSLVK------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 418
P+++ + G+ YW P + I +P + +G
Sbjct: 182 RTPAIIPRVSFDADDSDRILIRNGGGVLEYWFP---------------QMWILRPAEGKG 226
Query: 419 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 478
P + TR+L FA + VP M L+R ++ +VL ED
Sbjct: 227 G--------FLNFVTFTPVDAETTRILGYAGRTFA---RSVPGMDALFRRYSLRVLREDQ 275
Query: 479 RLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
R+V Q R A V D VR+R
Sbjct: 276 RVVESQHPRPIPEALRMEAHVPADAPQVRFR 306
>gi|72384130|ref|YP_293484.1| phthalate 4,5-dioxygenase [Ralstonia eutropha JMP134]
gi|72123473|gb|AAZ65627.1| Phthalate 4,5-dioxygenase [Ralstonia eutropha JMP134]
Length = 437
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 17/180 (9%)
Query: 200 SLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQN 250
+L+ GP ++ W P S+ L++ P V FR K G G Q
Sbjct: 9 TLSRVGPGSKVGALFRSVWLPALLSSQLQEPGGSPVRLKLLGEELVAFRTKKGEVGITQA 68
Query: 251 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM---PSTQL-RNVKIKSLPCFEQE 306
CAHR PL+ G V + I+C YHGW Y++ G+C +M P + VKIK+ P E+
Sbjct: 69 NCAHRLAPLYYGRVEDDGIRCNYHGWLYNSKGQCLEMQNEPDKAICSKVKIKAYPVAEKA 128
Query: 307 GMIWIW--PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 364
++WI+ G+ P P + P + E G ++ LD +H HT+
Sbjct: 129 DIVWIYMGEGEAPELPKFPWIDLPKSQRNATVWIQESNWLQG--MEGELDSSHVSILHTN 186
>gi|442318730|ref|YP_007358751.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
gi|441486372|gb|AGC43067.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
Length = 337
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 146/369 (39%), Gaps = 75/369 (20%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAH 254
+ P++ Y +W PVAFS ++++ + V++R G+ Q CAH
Sbjct: 1 MRTQDPLRSYQEVFSAYWHPVAFSHEVQERPVAFRLLGTEGVVWRSDTGV-AATQRYCAH 59
Query: 255 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL----RNVKIKSLPCFEQEGMIW 310
R L G ++C +HGW Y DG+C ++PS + ++ + C E+ G+IW
Sbjct: 60 RGADLCQGERVTQGLRCAFHGWTYGRDGQCLRIPSQPSAPIPASARLDTYRCHERYGLIW 119
Query: 311 IWPGDEPPTATIPCLLPPSGFEIHAEIV--MELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
+ D P A +P + A + ++ + G +++ +LD+AH + H TF
Sbjct: 120 VCLADT-PAAPLPEWPELEDGTVAAVALPRLDWEVSAGRMMEIILDVAHLSWVHRGTFGN 178
Query: 369 --------------GWSVPSLVKFLTPASGLQG----------YWD---PYPIDMEFRPP 401
V S + + A G++G +D P+ + + F+P
Sbjct: 179 PEQPEVPPYEVERHSGGVRSRIVYPALAPGMEGAPGRVDRTTLTYDVTLPFAVRLAFKPT 238
Query: 402 CMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF 461
T+ V P S +K + Y FAS H P
Sbjct: 239 LFYAHTV----------------------YAVASPLSEEKMQCFY-----FAS---HHPK 268
Query: 462 MQYLWRHFAEQ---VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
++ F + +L +D R+ GQ+ R + + V D L + YR AL G
Sbjct: 269 IRNFGEMFVKSELAILEQDRRVAEGQRPRAHPVDFAHEVHVKADSLPIEYRRAVAALRLG 328
Query: 519 -AKQLPFMK 526
A +LP ++
Sbjct: 329 DAPRLPGLE 337
>gi|228952851|ref|ZP_04114920.1| hypothetical protein bthur0006_22450 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|423424649|ref|ZP_17401680.1| hypothetical protein IE5_02338 [Bacillus cereus BAG3X2-2]
gi|423504089|ref|ZP_17480681.1| hypothetical protein IG1_01655 [Bacillus cereus HD73]
gi|449090153|ref|YP_007422594.1| hypothetical protein HD73_3495 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228806807|gb|EEM53357.1| hypothetical protein bthur0006_22450 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|401113421|gb|EJQ21290.1| hypothetical protein IE5_02338 [Bacillus cereus BAG3X2-2]
gi|402457667|gb|EJV89428.1| hypothetical protein IG1_01655 [Bacillus cereus HD73]
gi|449023910|gb|AGE79073.1| hypothetical protein HD73_3495 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 322
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 138/323 (42%), Gaps = 46/323 (14%)
Query: 218 WFPVAFSTDLKDDTMEP------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
W+ V+++ D+K ++ +V++R + + C HR L LG V G++ C
Sbjct: 13 WYAVSYAKDIKKIPVKKRVAGKDFVLYRDEKDEVQALSPYCPHRGADLSLGQVVNGKLVC 72
Query: 272 PYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDE--PPTATIPCL 325
PYHGWE+ + G C ++PS + + S P E+ G+IWI+P +E PP +
Sbjct: 73 PYHGWEFDSCGTCVRIPSQPNKPIPKFAHTLSYPVKEKIGLIWIYPDNEETPPEWQTFHV 132
Query: 326 LPPSGFEI---HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + F++ HA L ++++LD+AH + H T + K +
Sbjct: 133 MENTPFKLSFFHATWNAHLTRS----IESVLDIAHLAYVHKKTIGRK------TKAESTN 182
Query: 383 SGLQGYWDPYPID-----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPS 437
L+G D + +E++ P + GK E ++ Q T P
Sbjct: 183 YKLEGTLDQFIFSNGDAYLEYKFPHQWM-----LHSGKQENESFIQYIT-------FTPI 230
Query: 438 SRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNL 497
++T + M + LK+ P + + F+ +VL ED +V Q R A
Sbjct: 231 DEEETLI---MGYTGRTFLKYFPLLDQILAKFSLRVLKEDQIIVESQHPRPIPEALKMEA 287
Query: 498 PVGYDKLGVRYR-LWRDALEKGA 519
V D V++R W L+ G+
Sbjct: 288 HVHADMAQVQFRKRWFQFLQNGS 310
>gi|111021144|ref|YP_704116.1| vanillate monooxygenase oxygenase subunit [Rhodococcus jostii RHA1]
gi|110820674|gb|ABG95958.1| possible vanillate monooxygenase oxygenase subunit [Rhodococcus
jostii RHA1]
Length = 356
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 48/287 (16%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG-- 262
+T +N W+ A+ ++ + EP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTICEEPILFWRTEAGEAVAMSDRCVHRRYPLSEAPS 61
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPT 319
++ ++ C YHG+ Y +DG C +P R +++S EQ+ +W+W D + P
Sbjct: 62 RLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLRSYQVVEQDSFVWVWIADPQNPQ 121
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH------------ 362
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 122 QGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAET 181
Query: 363 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL-----S 406
T+ + +V + + F + ++G++G + D+E+ PPC+ L +
Sbjct: 182 PITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRIA 240
Query: 407 TIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 241 PIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|456353712|dbj|BAM88157.1| putative phthalate 4,5-dioxygenase oxygenase subunit [Agromonas
oligotrophica S58]
Length = 439
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 80/184 (43%), Gaps = 23/184 (12%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTCAHRA 256
G P + +W P S DL D E V FR +G G V C HR
Sbjct: 14 GKGTPLGELFRLYWIPCLPSADLTQDGPPRRIRLLGEDLVAFRNSEGRVGLVDQACPHRG 73
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIWI 311
PL G + ++C YHGW++ G MP+ LR+ V+IK C E+ GMIW
Sbjct: 74 APLIFGRNEDCGLRCVYHGWKFDVTGAVTDMPAEPLRSRLKERVRIKVYQCRERNGMIWT 133
Query: 312 WPG----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTST 365
+ G D PP + L P ++H + ++ E L ++ +D AHAP H
Sbjct: 134 YMGPDQADPPPLPNVEWNLVPQE-QVHVSLRVQ---ECNWLQAVEGEIDSAHAPLLHGRL 189
Query: 366 FAKG 369
A+G
Sbjct: 190 DAQG 193
>gi|347760510|ref|YP_004868071.1| ring-hydroxylating dioxygenase ferredoxin subunit
[Gluconacetobacter xylinus NBRC 3288]
gi|347579480|dbj|BAK83701.1| ring-hydroxylating dioxygenase ferredoxin subunit
[Gluconacetobacter xylinus NBRC 3288]
Length = 377
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+FW+PVA+S DLK D P V+ R ++G + + C HR PL G+VN
Sbjct: 28 DFWYPVAWSADLKKDKTLAVSYAGTPIVLVRPEEGSVFALYDRCPHRQVPLSKGTVNGQT 87
Query: 269 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
++C YHGW + G+C +P +L N +++ P E G+I+I+PGD T+P
Sbjct: 88 VRCCYHGWAFGRSGRCIDVPYLGKGKLPN-GVRTFPVREAGGLIFIFPGDPEKADTVP 144
>gi|307150004|ref|YP_003885388.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306980232|gb|ADN12113.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 349
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 138/315 (43%), Gaps = 51/315 (16%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 263
T L+NFW+ + +LK + EP +I R DG +++ C HR PL G
Sbjct: 2 TTLLRNFWYVALAAKNLKAGQLVGKKMLGEPVLIGRKADGEVFAMRDICPHRGIPLRHGW 61
Query: 264 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDE 316
+ + C YHGW++ T DG+C ++PS R +++++ P E +G IW++ E
Sbjct: 62 LEGDDVCCCYHGWKFDTKDGRCSEIPSLTEYDKLDFRRIQVQTYPAREIQGHIWVYIPSE 121
Query: 317 ----------PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
PP T+P + +I ++ ++ L+D AH P+ H++ +
Sbjct: 122 AKRNLDESELPPVPTVPD-FGKTAPQIAETSHFACDVDQAVI--GLMDPAHGPYVHSAWW 178
Query: 367 AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR-QCA 425
+ VK + ++P P+ P M +S +KP KL G +
Sbjct: 179 WRSGPRKFRVK--------EKLYEPVPMGFRLAPYEMPVS----AKPYKLLGNKVSIEIV 226
Query: 426 THLHQL-HVCLPSSRKKTRLLYRMS-LD------FASVLKHVPFM---QYLWRHFAEQVL 474
L L L R K LL ++ +D S+ +P++ + + R+ + L
Sbjct: 227 FQLPTLRQEILRGDRHKACLLTAITPIDENQCEVHQSIYWTIPWLGIFKPIMRYLTVEFL 286
Query: 475 NEDLRLVLGQQERMN 489
N+D +V+ QQE ++
Sbjct: 287 NQDRDVVIKQQEGLS 301
>gi|160896802|ref|YP_001562384.1| Rieske (2Fe-2S) domain-containing protein [Delftia acidovorans
SPH-1]
gi|160362386|gb|ABX33999.1| Rieske (2Fe-2S) domain protein [Delftia acidovorans SPH-1]
Length = 358
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 218 WFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
W+ F+ +L+D + P V+FR DG +++ C HR PL G+V ++C
Sbjct: 20 WYVAGFAWELQDAPLARTLLGRPVVLFRTPDGSVAALEDRCCHRELPLSCGTVEARGLRC 79
Query: 272 PYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS 329
YHG + G+C ++P Q K +KS E++ ++WIW G P ++P PP+
Sbjct: 80 GYHGLLFDRAGQCLEIPGQQRIPPKACVKSFDLRERDQILWIWMGATP--DSVPAQEPPA 137
Query: 330 GFEIHAEI-------VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 372
+ +H + V + L+ DNLLDL+H + H T V
Sbjct: 138 -YPVHGDARYRFGGDVYHYDAPYQLIHDNLLDLSHLGYVHLKTIGGNAGV 186
>gi|456393013|gb|EMF58356.1| ring-hydroxylating dioxygenase [Streptomyces bottropensis ATCC
25435]
Length = 342
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 117/276 (42%), Gaps = 42/276 (15%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMEPWV------IFRGKDGIPGCVQNTCAHRACPLHLGSV 264
++ ++N W+ A+S ++ W+ +R DG V++ C HR PL LG +
Sbjct: 3 SSHVRNGWYLGAWSDEIGRTLTRRWITDIPVCFYRLPDGGVTAVEDRCPHRKYPLSLGHL 62
Query: 265 N-EGRIQCPYHGWEYSTDGKCEKMPSTQLR-NVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
+ EG +QC YHG+ + G C + R ++ P E++G+IWIWPGD P
Sbjct: 63 DDEGTLQCDYHGYRFDGQGVCVGVAEQADRPKAALRRFPLVEKDGVIWIWPGD--PDLAD 120
Query: 323 PCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 377
LLP + + H V+ L H LL++NLLDL H F H ++ + +
Sbjct: 121 ARLLPDTSWLTDPHWTHVHGVVPLKARHLLLVENLLDLTHETFLHPTSIGNAAVAATPID 180
Query: 378 ---------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 416
F + GL D + D EF PP + + I ++ G
Sbjct: 181 VTVDGDRVGFSRRMVGIEAPPFYEKSCGLTSPVDRWQ-DGEFHPPGIFVLHIRVAATGTE 239
Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 452
E + H+ L+ P +T Y ++ D+
Sbjct: 240 EPEG-----FHMKVLYGMTPGQGNETHDFYALARDY 270
>gi|345855381|ref|ZP_08808110.1| putative oxygenase Rieske iron-sulfur component [Streptomyces
zinciresistens K42]
gi|345633153|gb|EGX54931.1| putative oxygenase Rieske iron-sulfur component [Streptomyces
zinciresistens K42]
Length = 397
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 19/189 (10%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+FW+PVA S ++ + E ++RG G +++ CAHR PL +G V
Sbjct: 35 DFWYPVARSRTVRRGKVVATAFAGERIALYRGTGGTVHALEDRCAHRQVPLSMGVVEGET 94
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YH W Y DG+ ++P + + ++ P E G+++++PGD P A +
Sbjct: 95 LRCCYHAWAYRGDGRISQIPYLSKGDGRPPRGVRGYPVREAYGLVFVFPGD-PELAAVTA 153
Query: 325 L--LPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 380
L LP G + + + + L +NLLD+ H F H K P L+ + T
Sbjct: 154 LPVLPAFGSPAYRTMTFSRTVRCHYSFLHENLLDMNHQ-FLHRGVLGK--LRPELLGYRT 210
Query: 381 PASGLQGYW 389
A ++ +
Sbjct: 211 TARSVEARY 219
>gi|188579895|ref|YP_001923340.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium populi
BJ001]
gi|179343393|gb|ACB78805.1| Rieske (2Fe-2S) domain protein [Methylobacterium populi BJ001]
Length = 361
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 141/346 (40%), Gaps = 48/346 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L N W+ ++ + M E V+ RGKDG +++ C HR L G +
Sbjct: 24 LPNAWYCAGQASAVAGGKMRAVALNGEQVVLGRGKDGALFALRDRCPHRGMALSKGKFDG 83
Query: 267 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 320
+ CP+HGW + TDG+C +P+ + + ++ P E G +W+ P P
Sbjct: 84 DTLMCPFHGWRFGTDGRCRDVPTLSEHDASDFSRIAVQRFPIVESAGFLWVNPHLGPSDP 143
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD--NLLDLAHAPFTH-TSTFAKGWSVPSLVK 377
+P FE +V+EL +E L +L+D H F H T F + VK
Sbjct: 144 EAVPAVPSLDFEPAGCLVLELEVEASFDLTTLSLVDPGHVAFVHDTWWFRPSKELREKVK 203
Query: 378 FLTP--------------ASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQNTR 422
P +S + P +++EFR P + L I K G T+
Sbjct: 204 TFQPVPHGFVMTSHATTTSSPVYRLLGGAPEVEIEFRLPGVRLERI---KAG------TK 254
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 482
+ A + + P+ T LY S+ ++LK P + L R F L +D +++
Sbjct: 255 RVANYTFATPMG-PNRTMLTNALY-WSMPALNLLK--PIARPLMRQF----LTQDQQVLQ 306
Query: 483 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
Q ++ + L G +RL R+ALE + PF P+
Sbjct: 307 HAQAGLDRKPTMVLLGQGDLPSQWYFRLKREALEAAREGRPFANPL 352
>gi|427418552|ref|ZP_18908735.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
gi|425761265|gb|EKV02118.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
Length = 346
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 213 RLKNFWFPVAFSTDLKDDT------MEPW-VIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
+ ++FW+ VA ST LK T ++ W VIFRG++G P +++ C HR L G V+
Sbjct: 10 QFEDFWYVVALSTQLKPKTVLQRTVLDEWLVIFRGENGQPVALRDRCLHRNTRLSGGKVH 69
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWI--WPGDEPP 318
+G++QCPYHGW+Y++ G+ +P+ N K+ EQ+G +++ G E
Sbjct: 70 KGQLQCPYHGWQYASTGQVTNVPAEGEQFATTSNRCAKAYDTCEQDGYVYVRLRGGLETQ 129
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
+P P G+E ++ +N +D+ H H F
Sbjct: 130 PFAMPHFQAP-GWET-VRVINRFANNVTNCAENFIDIPHTVSVHPGIF 175
>gi|398821219|ref|ZP_10579698.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
YR681]
gi|398228120|gb|EJN14263.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
YR681]
Length = 445
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 80/192 (41%), Gaps = 37/192 (19%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVI---------FRGKDGIPGCVQ 249
K L +GP L+ FW PV S +L EP I FR G+ G +
Sbjct: 8 KFLTEAGPGTAMGELLRRFWIPVLLSEELPKPDGEPKKITVLGEELLAFRDTRGVVGIID 67
Query: 250 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFE 304
C HR L LG E I+C YHGW++ TDG C MP++ ++IKS P E
Sbjct: 68 QYCPHRGANLWLGRNEECGIRCVYHGWKFDTDGACVDMPTSYPDLNAKDLIRIKSYPVRE 127
Query: 305 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL------------LDNL 352
MIW + G P A +P L E+ + LP H + L+
Sbjct: 128 WGEMIWAYMG---PAAVMPEL-------PDLEMAL-LPASHRYVSKKWQDCNWVQALEGS 176
Query: 353 LDLAHAPFTHTS 364
+D AH F H S
Sbjct: 177 IDTAHFTFAHLS 188
>gi|333916752|ref|YP_004490484.1| Vanillate monooxygenase [Delftia sp. Cs1-4]
gi|333746952|gb|AEF92129.1| Vanillate monooxygenase [Delftia sp. Cs1-4]
Length = 358
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 218 WFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
W+ F+ +L+D + P V+FR DG +++ C HR PL G+V ++C
Sbjct: 20 WYVAGFAWELQDAPLARTLLGRPVVLFRTPDGSVAALEDRCCHRELPLSCGTVEARGLRC 79
Query: 272 PYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS 329
YHG + G+C ++P Q K +KS E++ ++WIW G P ++P PP+
Sbjct: 80 GYHGLLFDRAGQCLEIPGQQRIPPKACVKSFDLRERDQILWIWMGATP--DSVPAQEPPA 137
Query: 330 GFEIHAEI-------VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 372
+ +H + V + L+ DNLLDL+H + H T V
Sbjct: 138 -YPVHGDARYRFGGDVYHYDAPYQLIHDNLLDLSHLGYVHLKTIGGNAGV 186
>gi|428297609|ref|YP_007135915.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
gi|428234153|gb|AFY99942.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
Length = 444
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 126/307 (41%), Gaps = 46/307 (14%)
Query: 250 NTCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKS 299
+ C HR PL G +++ G + C YHGW++ + G C +P + N + S
Sbjct: 51 DECPHRLAPLSEGRIDDQTGNLMCSYHGWQFDSQGSCTHIPQAEKAEIIAKNQDNFCVTS 110
Query: 300 LPCFEQEGMIWIW----PGDEPPTATIPC--LLPPSGFEIHAEIVMELPIEHGLLLDNLL 353
P E++ ++W+W D T +P L+ S + + V +L + L++N+
Sbjct: 111 FPVREEQDLLWVWLDLNSVDIAATTKLPLSPLVDASKGFVWSSFVRDLEYDWQTLVENVA 170
Query: 354 DLAHAPFTHTSTFA-KGWSVPSLVKFLTPASGL-----QGYWDPYPIDMEFRPPCMVLST 407
D +H PF H + + P L++ + + G + P + F PPC +
Sbjct: 171 DPSHVPFAHHGVQGNRDKAKPILMQVKDSQADIIEVETVGNFS-VPTKITFEPPCRLEYA 229
Query: 408 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 467
I K G T C+P S K+RL+ + +FA + W
Sbjct: 230 IQFGGEDKQMGLVT-----------YCIPISPGKSRLVAQFPRNFAK--RAHKLTPRWWD 276
Query: 468 HFAEQVLNEDLRLV--------LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGA 519
H + L D ++ L Q +R + + LP G D+L + YR W D G
Sbjct: 277 HINNRNLVIDGDMILLRQQEQLLQQHQRTESWKTAYKLPTGADRLVIEYRNWFDRYCGG- 335
Query: 520 KQLPFMK 526
+LP+ K
Sbjct: 336 -KLPWEK 341
>gi|307725646|ref|YP_003908859.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1003]
gi|307586171|gb|ADN59568.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1003]
Length = 356
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 17/179 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L N W+ A S+++ EP V++R G + + C HR PL G + +
Sbjct: 4 LLNAWYVAALSSEVTAHAPLGRTLLDEPVVLYRTAGGEAVALADRCPHRFAPLSSGRIVD 63
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
G ++CPYHG + G C P R + + P E+ G +W WPGD P +
Sbjct: 64 GTLECPYHGLRFGAHGHCVFNPHGDGRVPARAQARRYPVHERYGAVWFWPGD--PQRALG 121
Query: 324 CLLPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 377
LP + +E + + L DNLLDL+H + H T +V+
Sbjct: 122 TPLPAFDYLDPRDHFTSERYLHTRANYQLSADNLLDLSHFQYLHPDTLGSEQMASGVVR 180
>gi|297799432|ref|XP_002867600.1| hypothetical protein ARALYDRAFT_492262 [Arabidopsis lyrata subsp.
lyrata]
gi|297313436|gb|EFH43859.1| hypothetical protein ARALYDRAFT_492262 [Arabidopsis lyrata subsp.
lyrata]
Length = 521
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 121/299 (40%), Gaps = 46/299 (15%)
Query: 248 VQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QLRNVKIK 298
+ +TC HR PL G +++ GR+QC YHGW ++ G C+ +P + +
Sbjct: 118 MDDTCPHRLAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVA 177
Query: 299 SLPCFEQEGMIWIWPGDEPPTAT---------IPCLLPPSGFEIHAEIVMELPIEHGLLL 349
P Q +IW WP +P IP L PS ++ ++P + +L+
Sbjct: 178 VYPSTVQHEIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGN--RDIPYGYDVLV 235
Query: 350 DNLLDLAHAPFTHTSTFAKGWSVPSL-VKFLTPASGLQ----GYWDPYPIDMEFRPPCMV 404
+NL+D AH P+ H +G + VK L GY F PC+
Sbjct: 236 ENLMDPAHVPYAHYGLMREGGKPLEINVKKLDSKGFFSKQEWGY-------SNFIAPCVY 288
Query: 405 LSTIGI------SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVL-K 457
S+ P L + +C+P S ++RL++ +F + K
Sbjct: 289 RSSTDPLPEQEHEYPAPAASDKAALSKRRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDK 348
Query: 458 HVPFMQYLWRHFAEQVLNEDLRLVLGQQER-MNNGANVWN----LPVGYDKLGVRYRLW 511
VP ++++ +L+ DL L+ ++ + + G W +P D V +R W
Sbjct: 349 IVP--RWVFHIGQNTILDSDLHLLHVEERKILERGPKNWQKACFIPTKSDANVVTFRRW 405
>gi|407711022|ref|YP_006794886.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
gi|407239705|gb|AFT89903.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
Length = 361
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 121/328 (36%), Gaps = 54/328 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L N W+ A S+++ + EP V +R G + + C HR PL G + +
Sbjct: 4 LLNTWYVAALSSEVAANAPLARTLLDEPVVFYRTAGGQAVALADRCPHRFAPLSRGRLVD 63
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRN----------VKIKSLPCFEQEGMIWIWPGDE 316
G ++CPYHG + DG+C P RN + + P E+ G +W WPGD
Sbjct: 64 GALECPYHGLRFGADGRCVFNPHGN-RNGNDTASPPARAQARHYPVRERYGAVWFWPGDP 122
Query: 317 PPTATIPC-----LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 371
A P L P F + + L DNLLDL+H + H T
Sbjct: 123 ERAAHTPLPAFDYLDPRENFTTGR--YLHTRANYQLSADNLLDLSHFQYLHPETLGSEQM 180
Query: 372 VPSLVK-----------------FLTPA-----SGLQGYWDPYPIDMEFRPPCMVLSTIG 409
+V+ +L P + L G +D+ + PP ++ +
Sbjct: 181 ASGVVRATVAGDSVSVRREMKGEYLRPMLTQSFNLLYGERADRELDVHWMPPGLLTIVVR 240
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 469
IS+ G E + A H P + + + L A + +
Sbjct: 241 ISESGLPETAREAKSA------HWLTPETAMSSHYFFAFGLPRAMGEHGAELVSRTAQSL 294
Query: 470 AEQVLNEDLRLVLGQQERMNNGANVWNL 497
+ED+ ++ QQ RM + W+L
Sbjct: 295 LAPFRDEDIPMLEAQQ-RMMGERDFWSL 321
>gi|167566723|ref|ZP_02359639.1| Rieske (2Fe-2S) domain protein [Burkholderia oklahomensis EO147]
Length = 382
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 22/191 (11%)
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------- 232
A P ++D V R V P+ P + W+P+A+S ++K
Sbjct: 3 AGPLLDSSAIDPVASAPVRDLRRV--PIHP------DHWYPLAWSKEVKRGKALGVHFAG 54
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---S 289
+P V+ R + G +++ CAHR PLH G V I+C YHGW Y G C +P
Sbjct: 55 DPIVLVRTRSGTIFALEDRCAHRQVPLHAGVVEGESIRCGYHGWTYDCSGHCVDVPYIGR 114
Query: 290 TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE---IVMELPIEHG 346
+L N +++ PC E G+I+++PGD P S + + E+ +
Sbjct: 115 ARLPN-GVRAYPCREAHGLIFVFPGDAALAEERPLPALASAADKAYKTRRFGREVKCHYS 173
Query: 347 LLLDNLLDLAH 357
+ +NL+D+ H
Sbjct: 174 FMHENLMDMNH 184
>gi|384103330|ref|ZP_10004307.1| vanillate monooxygenase oxygenase subunit [Rhodococcus imtechensis
RKJ300]
gi|383839171|gb|EID78528.1| vanillate monooxygenase oxygenase subunit [Rhodococcus imtechensis
RKJ300]
Length = 357
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 48/287 (16%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG-- 262
+T +N W+ A+ ++ + EP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTICEEPILFWRTEAGEAVAMSDRCVHRRYPLSEAPS 61
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPT 319
++ ++ C YHG+ Y +DG C +P R ++KS EQ+ +W+W D + P
Sbjct: 62 RLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLKSYQVVEQDSFVWVWIVDPQNPE 121
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH------------ 362
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 122 QGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAET 181
Query: 363 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL-----S 406
T+ + +V + + F + ++G++G + D+E+ PPC+ L +
Sbjct: 182 PITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRIA 240
Query: 407 TIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 241 PIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|350567199|ref|ZP_08935784.1| Rieske (2Fe-2S) domain protein [Peptoniphilus indolicus ATCC 29427]
gi|348659611|gb|EGY76364.1| Rieske (2Fe-2S) domain protein [Peptoniphilus indolicus ATCC 29427]
Length = 276
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-N 265
+KN W+ V S+++ + + V +R G C+ + C+HR L G V N
Sbjct: 2 IKNQWYAVLSSSEVNKNQLVGVRRLGMDLVFYRDNKGEVSCLMDMCSHRGAALSKGEVVN 61
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRN------VKIKSLPCFEQEGMIWIWPGDEPPT 319
IQCP+HG E++ +G+C+ +P+ + N + E+ +I+IW GD+ +
Sbjct: 62 NCNIQCPFHGLEFNGEGECQFIPANGINNQGDLTRYNVSFFKLIEKHDIIYIWYGDKDKS 121
Query: 320 A-TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
+ IP + +E + ++N LD+ H PF H +T G
Sbjct: 122 SDDIPFHDEIDKSFVFSEFKDHWNTHYSRAIENQLDVVHLPFVHHNTIGAG 172
>gi|124268855|ref|YP_001022859.1| oxidoreductase subunit alpha [Methylibium petroleiphilum PM1]
gi|124261630|gb|ABM96624.1| oxidoreductase alpha subunit [Methylibium petroleiphilum PM1]
Length = 407
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 22/176 (12%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTME-------PWVIFRGKDGIPGCV---QN 250
L+ S +Q T ++N W+ S + + P V++R + G G V
Sbjct: 40 LHSSVEIQVKETLIRNLWYVAGTSDEFAPGQLVGQTIVGLPLVLWRPEAG--GEVVAFDG 97
Query: 251 TCAHRACPLHLGSV-NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQ 305
C H+ PL G + +G ++C YHG + + GKC K+PS R + K++ P EQ
Sbjct: 98 RCCHKRMPLAAGKLLADGTLECAYHGLCFDSAGKCVKIPSQPGRAIPSRAKLRPYPIVEQ 157
Query: 306 EGMIWIWPGDEPPTA----TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAH 357
+GM+WIW GD+ A IP L P I + E+P + LL++NLLD++H
Sbjct: 158 DGMVWIWMGDDANPALRPPRIPELASPEWEAIRVQNA-EVPTNYLLLIENLLDISH 212
>gi|330808947|ref|YP_004353409.1| vanillate monooxygenase subunit [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377055|gb|AEA68405.1| putative vanillate monooxygenase, subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 347
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ A+ T++K + EP V FR G + + C HR PL +G +
Sbjct: 4 LRNVWYAAAWGTEVKAGELFQRTLLNEPVVFFRDTQGNAQAIADRCPHRFAPLGMGILKG 63
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 323
++CPYHG E+ G C P + K+K+ P E+ ++WIW GD
Sbjct: 64 DAVRCPYHGLEFDGSGACVHNPHGDGAIPKAAKVKAYPLVERYSLLWIWMGDA--QLADA 121
Query: 324 CLLPPSGF--EIHAEI---VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
L+P E H + + + L DN++DL+H F H ST
Sbjct: 122 TLIPDFSCMDEDHWYVGKRYLHARANYVLETDNIMDLSHIEFLHPSTLG 170
>gi|421849246|ref|ZP_16282229.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
NBRC 101655]
gi|371460053|dbj|GAB27432.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
NBRC 101655]
Length = 338
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 133/304 (43%), Gaps = 50/304 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L ++W P+A +L+D + P VI+R + I + C HR PL +G N
Sbjct: 15 LASYWHPIALVRELEDKPLGVTLLDAPLVIYRAGEDI-VVADDLCPHRGVPLSMGKGNGQ 73
Query: 268 RIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIW--IWPGDEPPTAT 321
+ C YHG+++ G+C ++P S + +++ P E+ G+IW + P D +
Sbjct: 74 TVACAYHGFQFGHQGQCVRIPAHPDSAIPSRLNLRTYPVVERYGLIWTCLRPQDN-EDIS 132
Query: 322 IPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLVK 377
IP + +GF+ +++ G ++ +D+AH F HT TFA VP+ +
Sbjct: 133 IPSMPHWDEAGFQQINCPWIDIAGFAGRQVEGFIDVAHFAFVHTETFADPDNPVVPAYMP 192
Query: 378 FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH---------- 427
+T PY + E+R + IG S+ G+ + + R H
Sbjct: 193 KMT----------PYGFEAEYR-SNVGNYPIGQSERGRPDFEWLRHFRVHVPFTATLEIH 241
Query: 428 ------LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
L ++ P S KKTR+ M +F + L +Q ++ F +V ED LV
Sbjct: 242 FPDNGRLVIMNAASPVSAKKTRMFAPMCRNFDTDLP----LQDVY-DFNLKVFEEDRALV 296
Query: 482 LGQQ 485
Q+
Sbjct: 297 EAQK 300
>gi|254451458|ref|ZP_05064895.1| vanillate O-demethylase oxygenase subunit [Octadecabacter arcticus
238]
gi|198265864|gb|EDY90134.1| vanillate O-demethylase oxygenase subunit [Octadecabacter arcticus
238]
Length = 346
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMEPWV------IFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ A+ ++ D + V +FR + G +++ C HR PL G +
Sbjct: 3 LKNAWYVAAWDHEVTRDLQQITVLGENVCVFRSEAGELVGLEDACPHRKLPLSKGRIKGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
++C YHG + G+C P T N ++ + P E+ G++WIW G+ P A + +
Sbjct: 63 TVECGYHGLTFDCAGQCVWAPGTGRIPSNARVHAYPLHEKYGLVWIWMGN-PALADVNDI 121
Query: 326 LPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
+ ++ MEL + L+ DNLLD H + H S+FA
Sbjct: 122 FDIENYGDPAWGMNRGDAMELDCNYLLMCDNLLDPTHVAWVHQSSFA 168
>gi|443643880|ref|ZP_21127730.1| Phenylpropionate dioxygenase afamily ring-hydroxylating dioxygenase
[Pseudomonas syringae pv. syringae B64]
gi|443283897|gb|ELS42902.1| Phenylpropionate dioxygenase afamily ring-hydroxylating dioxygenase
[Pseudomonas syringae pv. syringae B64]
Length = 361
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 295
V+FR +DG P + + C HR L G + + + CPYHGW Y +G+ +PS R
Sbjct: 45 VLFRQRDGQPAALLDQCVHRGTRLSAGKITDDCLVCPYHGWRYDANGQVVHIPSVDARQG 104
Query: 296 KIKS---------LPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVM--ELPIE 344
KS EQ+G++W++ G T LP G M +
Sbjct: 105 AAKSPDYRYRQRHFAVCEQDGLVWVYTGTRDARETPIFRLPAYGERPWQSYFMINTFDAD 164
Query: 345 HGLLLDNLLDLAHAPFTHTSTF 366
G L+ N LD+ H F H F
Sbjct: 165 VGSLVQNFLDVPHTVFVHEGIF 186
>gi|323530310|ref|YP_004232462.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1001]
gi|323387312|gb|ADX59402.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1001]
Length = 361
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 121/328 (36%), Gaps = 54/328 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L N W+ A S+++ + EP V +R G + + C HR PL G + +
Sbjct: 4 LLNTWYVAALSSEVTANAPLARTLLDEPVVFYRTAGGQAVALADRCPHRFAPLSRGRLVD 63
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRN----------VKIKSLPCFEQEGMIWIWPGDE 316
G ++CPYHG + DG+C P RN + + P E+ G +W WPGD
Sbjct: 64 GALECPYHGLRFGADGRCVFNPHGN-RNGNDTASPPARAQARHYPVRERYGAVWFWPGDP 122
Query: 317 PPTATIPC-----LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 371
A P L P F + + L DNLLDL+H + H T
Sbjct: 123 ERAAHTPLPAFHYLDPRENFTTGR--YLHTRANYQLSADNLLDLSHFQYLHPETLGSEQM 180
Query: 372 VPSLVK-----------------FLTPA-----SGLQGYWDPYPIDMEFRPPCMVLSTIG 409
+V+ +L P + L G +D+ + PP ++ +
Sbjct: 181 ASGVVRATVAGDTVSVRREMKGEYLRPMLTQSFNLLYGERADRELDVHWMPPGLLTIVVR 240
Query: 410 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 469
IS+ G E + A H P + + + L A + +
Sbjct: 241 ISESGLPETAREAKSA------HWLTPETAMSSHYFFAFGLPRAMGEHGAELVSRTAQSL 294
Query: 470 AEQVLNEDLRLVLGQQERMNNGANVWNL 497
+ED+ ++ QQ RM + W+L
Sbjct: 295 LAPFRDEDIPMLEAQQ-RMMGERDFWSL 321
>gi|254418839|ref|ZP_05032563.1| Rieske (2Fe-2S) domain protein [Brevundimonas sp. BAL3]
gi|196185016|gb|EDX79992.1| Rieske (2Fe-2S) domain protein [Brevundimonas sp. BAL3]
Length = 376
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 28/182 (15%)
Query: 207 VQPYNTR-LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACP 258
QP+ + + W+ VA S D+ + EP +I R + G +++ C HRA P
Sbjct: 23 AQPFGKGFVADAWYFVALSRDVAPAGLKRYEIMGEPVLIGRTRAGAVYAMRDICPHRAAP 82
Query: 259 LHLGSV----NEGR-IQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEG 307
L G + EG I+CPYHGW + DG C +PS + +K+++ P E +G
Sbjct: 83 LSAGKLVEKPGEGETIECPYHGWRFRPDGVCAAIPSLVEDQAFEANRIKVRAFPVRESQG 142
Query: 308 MIWIWPGDEPPTATIPCLLPP-------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPF 360
M+++W + P PP SG ++ + + I+H ++ L+D AH P+
Sbjct: 143 MVFVWMASDARNPMEPDHEPPVFPGVVGSGPKLVEAMEFDSHIDHAVV--GLMDPAHGPY 200
Query: 361 TH 362
H
Sbjct: 201 VH 202
>gi|331697482|ref|YP_004333721.1| Phthalate 4,5-dioxygenase [Pseudonocardia dioxanivorans CB1190]
gi|326952171|gb|AEA25868.1| Phthalate 4,5-dioxygenase [Pseudonocardia dioxanivorans CB1190]
Length = 451
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 61/133 (45%), Gaps = 16/133 (12%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQNTCAHR 255
GP P L+ +W P +++ EP V FR DG G VQ C HR
Sbjct: 14 GPGTPMGDLLRRYWTPALLASEAPTPDGEPVRVRLLGEDLVAFRDTDGKVGLVQENCPHR 73
Query: 256 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIW 310
L G E ++CPYHGW++ +G C MPS ++ VKIK+ P E G+IW
Sbjct: 74 GASLWFGRNEECGLRCPYHGWKFDREGNCVDMPSEPPQSVFKDKVKIKAYPTHESGGVIW 133
Query: 311 IWPGDEPPTATIP 323
+ G PP P
Sbjct: 134 TYMG--PPEKMTP 144
>gi|109897179|ref|YP_660434.1| Rieske (2Fe-2S) domain-containing protein [Pseudoalteromonas
atlantica T6c]
gi|109699460|gb|ABG39380.1| Rieske (2Fe-2S) region [Pseudoalteromonas atlantica T6c]
Length = 355
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 206 PVQPYNTRLKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPL 259
P + + ++N W+ AFS ++ + ME P +++R +DG P + C HR L
Sbjct: 3 PFKYKTSIVRNRWYMAAFSNEISREPMERTIHSKPVLMYRKEDGSPVAMHGLCPHRYFSL 62
Query: 260 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPS--TQLRNVKIKSLPCFEQEGMIWIWPGDEP 317
G V I C YHG+ ++ +G C +PS T RN P E+ + WIW GD
Sbjct: 63 VKGRVEGDNIVCGYHGFTFADNGDCIDIPSQDTVPRNFCQPVYPIEERGPICWIWMGDLD 122
Query: 318 PTATIPCLLPPS---GFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
T L+PP G + +E + LL+DNL+DL H P+ H
Sbjct: 123 TCDT--DLIPPYHDFGLDNPDTYYSSENYFHVKGRSQLLVDNLMDLTHLPYIH 173
>gi|374288505|ref|YP_005035590.1| putative oxidoreductase alpha subunit [Bacteriovorax marinus SJ]
gi|301167046|emb|CBW26625.1| putative oxidoreductase alpha subunit [Bacteriovorax marinus SJ]
Length = 345
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 213 RLKNFWFPVAFSTDLKDD------TMEPWV-IFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
KNFW+ S +L + ++ W+ +FRG DG P +Q+ C HR L G V
Sbjct: 8 NFKNFWYIACESKELGKNQVLARTILDEWIALFRGDDGAPVALQDRCIHRNSQLSKGWVK 67
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-----KSLPCFEQEGMIWIWPGDEPPTA 320
+G++QC YHGW + GK +PS K+ KS C EQ+G I+I
Sbjct: 68 DGQLQCSYHGWTFDKVGKLTGIPSEGPNQKKVGSRCAKSYECIEQDGFIFIRLEKNENLD 127
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTSTF 366
P +P G + + + ++ ++ +N +D+ H F H F
Sbjct: 128 IPPHRMPHYGEKGWQTVRLFNVFKNSVINCAENYIDVPHTVFVHDKIF 175
>gi|428310254|ref|YP_007121231.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428251866|gb|AFZ17825.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 383
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 21/176 (11%)
Query: 216 NFWFPVAFSTDLKDDTMEPWVI-------FRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N+W+PV +++ LK + P VI +R + G +++ C H+ LH G V
Sbjct: 24 NYWYPVGWASQLKPGDIMPVVIWQQAIAVYRDETGQIHALEDACPHKGIALHKGKVQGCH 83
Query: 269 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
+ C YHGWE++ +G+C +P +L + +S P E+ +IW++PGD PT
Sbjct: 84 LTCAYHGWEFNGNGECVGIPYLPEGQKLPRAQARSYPVQEKYNLIWLFPGD--PTLAASQ 141
Query: 325 LLPPSGFEIHAEIVM-----ELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 375
LP H + +M + + +N +D+ H F H + +GW P L
Sbjct: 142 ELPHVPEFDHPDYLMIPLAAHMQSHFSICNENAMDVFHG-FLHQNL--QGWFNPVL 194
>gi|340777444|ref|ZP_08697387.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
aceti NBRC 14818]
Length = 193
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 19/158 (12%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+FW+PVA+S +LK +P + R ++G +++ CAHR PL G V
Sbjct: 39 DFWYPVAWSRELKRGKTIGVRYAGQPIALIRPEEGNIFALEDRCAHRQVPLSKGHVQGQS 98
Query: 269 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+QC YHGW Y G+C +P +L N +++ P EQ+G+I+++PGD T+
Sbjct: 99 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPVIEQDGLIFVFPGDPEKAKTV--H 155
Query: 326 LPPSGFEIH------AEIVMELPIEHGLLLDNLLDLAH 357
LP + + E+ + + +NL+D+ H
Sbjct: 156 LPATLARVDDPAYKTRRFGQEVGCHYSFMHENLMDMNH 193
>gi|325517532|gb|ADZ25004.1| Rieske (2Fe-2S) domain-containing protein [Sorangium cellulosum]
Length = 337
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+ N W+ V S ++ D + + V++R G C+ + C HR L +G V +G
Sbjct: 2 IPNEWYAVLESHRVRRDPVGLKRLGQDIVLWRQSSGNVACLIDRCPHRGAKLSVGRVAQG 61
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDE----PP 318
I+CPYHG+ + G C +P+ + + + S P E+ G+IW+W G+ PP
Sbjct: 62 CIECPYHGFLFDAGGACRYVPANGADRPVPKGLHVDSWPVREEHGLIWVWWGESRSEYPP 121
Query: 319 TATIPCLLPPSGFEIH-AEIVMELPIEHGLLLDNLLDLAHAPFTHTS 364
+P P+ E H AE + ++N LD H PF H S
Sbjct: 122 ---VPWFPQPASDEAHAAESSGVYNFHYARAIENALDAHHFPFIHGS 165
>gi|75906758|ref|YP_321054.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75700483|gb|ABA20159.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 460
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 139/342 (40%), Gaps = 45/342 (13%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVIFRGKDGIP---------GCVQNTCAHR 255
G P++ W+PV + DL D + GKD + ++ C HR
Sbjct: 14 GGSDPHSFDWHEAWYPVHYLEDL-DKSKPTAFTLLGKDIVIWWDQQSQTWQAFEDQCPHR 72
Query: 256 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEG 307
PL G +NE G ++CPYHGW ++ DG C+++P + + + S E++G
Sbjct: 73 LAPLSEGRINEEGLLECPYHGWSFAGDGSCQRIPQQPEGGQAETSQRACVTSWLTTERQG 132
Query: 308 MIWIWPGDEPPTA--TIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 361
M++++ G+ A IP + P P G+ I ++P + LL+N+LD +H +T
Sbjct: 133 MLFVYIGNPENAAKTKIPVVEPLEESPDGWVI-INTFRDVPYDALTLLENILDPSHLAYT 191
Query: 362 HTSTFA--KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 419
H T K + L ++ G +G W + LST ++
Sbjct: 192 HHKTVGNRKNAAPLELEVVVSGKHGFKGVW-----HQSIKAGQSELSTTFVAPALMWHDI 246
Query: 420 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY---LWRHFAEQVLNE 476
N+ + + + P + + RL R F S L + F++ + H + + E
Sbjct: 247 NSER--GRILTVVYATPIRKGECRLFARFPFKFPSKLPGI-FIKLRPRWYYHLGQNGVLE 303
Query: 477 DLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 511
D ++ L QER N + LP D R W
Sbjct: 304 DDQIFLHYQERYLQAKGGSPNFTKAFYLPTKADSFVFELRQW 345
>gi|258543294|ref|YP_003188727.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-01]
gi|384043214|ref|YP_005481958.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-12]
gi|384051731|ref|YP_005478794.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-03]
gi|384054838|ref|YP_005487932.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-07]
gi|384058073|ref|YP_005490740.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-22]
gi|384060714|ref|YP_005499842.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-26]
gi|384064006|ref|YP_005484648.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-32]
gi|384120017|ref|YP_005502641.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256634372|dbj|BAI00348.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-01]
gi|256637430|dbj|BAI03399.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-03]
gi|256640482|dbj|BAI06444.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-07]
gi|256643539|dbj|BAI09494.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-22]
gi|256646594|dbj|BAI12542.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-26]
gi|256649647|dbj|BAI15588.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-32]
gi|256652635|dbj|BAI18569.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256655691|dbj|BAI21618.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-12]
Length = 351
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 148/344 (43%), Gaps = 65/344 (18%)
Query: 175 TDQTCASPSTSKQSLDIVKGKLPRK-SLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM- 232
T TCA P+ S+ LPR+ S + + L ++W P+A +L+D +
Sbjct: 2 TPPTCARPTESR---------LPRELSFDADDWLI-----LASYWHPIALVRELEDKPLG 47
Query: 233 -----EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM 287
P VI+R + I + C HR PL +G N + C YHG+++ G+C ++
Sbjct: 48 VTLLDAPLVIYRAGEDI-VVADDLCPHRGVPLSMGKGNGQTVACAYHGFQFGHQGQCVRI 106
Query: 288 P----STQLRNVKIKSLPCFEQEGMIW--IWPGDEPPTATIPCL--LPPSGFEIHAEIVM 339
P S + +++ P E+ G+IW + P D +IP + +GF+ +
Sbjct: 107 PAHPDSAIPSRLNLRTYPVVERYGLIWTCLRPQDN-EDISIPSMPHWDEAGFQQINCPWI 165
Query: 340 ELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLVKFLTPASGLQGYWDPYPIDME 397
++ G ++ +D+AH F HT TFA VP+ + +T PY + E
Sbjct: 166 DIAGFAGRQVEGFIDVAHFAFVHTETFADPDNPVVPAYMPKMT----------PYGFEAE 215
Query: 398 FRPPCMVLSTIGISKPGKLEGQNTRQCATH----------------LHQLHVCLPSSRKK 441
+R + IG S+ G+ + + R H L ++ P S KK
Sbjct: 216 YR-SNVGNYPIGQSERGRPDFEWLRHFRVHVPFTATLEIHFPDNGRLVIMNAASPVSAKK 274
Query: 442 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ 485
TR+ M +F + L +Q ++ F +V ED LV Q+
Sbjct: 275 TRMFAPMCRNFDTDLP----LQDVY-DFNLKVFEEDRALVEAQK 313
>gi|167573798|ref|ZP_02366672.1| Rieske (2Fe-2S) domain protein [Burkholderia oklahomensis C6786]
Length = 377
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 206 PVQPYNTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACP 258
P+ P + W+P+A+S ++K +P V+ R + G +++ CAHR P
Sbjct: 22 PIHP------DHWYPLAWSNEVKRGKALGVHFAGDPIVLVRTRSGTIFALEDRCAHRQVP 75
Query: 259 LHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGD 315
LH G V I+C YHGW Y G C +P +L N +++ PC E G+I+++PGD
Sbjct: 76 LHAGVVEGESIRCGYHGWTYDCSGHCVDVPYIGRARLPN-GVRAYPCREAHGLIFVFPGD 134
Query: 316 EPPTATIPCLLPPSGFEIHAE---IVMELPIEHGLLLDNLLDLAH 357
P S + + E+ + + +NL+D+ H
Sbjct: 135 AALAEERPLPALASAADKAYKTRRFGREVKCHYSFMHENLMDMNH 179
>gi|75462888|sp|Q9AHG3.1|TSAM2_COMTE RecName: Full=Putative toluene-4-sulfonate monooxygenase system
iron-sulfur subunit TsaM2; AltName:
Full=Toluenesulfonate methyl-monooxygenase oxygenase
component TsaM2
gi|13661652|gb|AAK37996.1| monooxygenase TsaM2 [Comamonas testosteroni]
Length = 346
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
+KN W+ +TD + E V+FR DG +++ C HR PL LG V +
Sbjct: 3 VKNTWYVAGMATDCSRKPLARTFLNEKVVLFRTHDGHAVALEDRCCHRLAPLSLGDVEDA 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTAT---- 321
I+C YHG ++ G C ++P + + ++ P E+ G++WIW GD P A
Sbjct: 63 GIRCRYHGMVFNASGACVEIPGQEQIPPGMCVRRFPLVERHGLLWIWMGD-PARANPDDI 121
Query: 322 -------IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
P SG+ IH + + L++DNLLD H + H +T
Sbjct: 122 VDELWNGAPEWRTDSGY-IHYQ------ANYQLIVDNLLDFTHLAWVHPTTLG 167
>gi|440719214|ref|ZP_20899643.1| iron-sulfur cluster-binding protein, Rieske family [Pseudomonas
syringae BRIP34876]
gi|440725227|ref|ZP_20905499.1| iron-sulfur cluster-binding protein, Rieske family [Pseudomonas
syringae BRIP34881]
gi|440368046|gb|ELQ05091.1| iron-sulfur cluster-binding protein, Rieske family [Pseudomonas
syringae BRIP34876]
gi|440369212|gb|ELQ06206.1| iron-sulfur cluster-binding protein, Rieske family [Pseudomonas
syringae BRIP34881]
Length = 361
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 295
V+FR +DG P + + C HR L G + + + CPYHGW Y +G+ +PS R
Sbjct: 45 VLFRQRDGQPAALLDQCVHRGTRLSAGKITDDCLVCPYHGWRYDANGQVVHIPSVDARQG 104
Query: 296 KIKS---------LPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVM--ELPIE 344
KS EQ+G++W++ G T LP G M +
Sbjct: 105 AAKSPDYRYRQRHFAVCEQDGLVWVYTGTRDARETPIFRLPAYGERPWQSYFMINTFDAD 164
Query: 345 HGLLLDNLLDLAHAPFTHTSTF 366
G L+ N LD+ H F H F
Sbjct: 165 VGSLVQNFLDVPHTVFVHEGIF 186
>gi|383774963|ref|YP_005454032.1| dioxygenase [Bradyrhizobium sp. S23321]
gi|381363090|dbj|BAL79920.1| probable dioxygenase [Bradyrhizobium sp. S23321]
Length = 452
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 25/181 (13%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTC 252
+ +GP P ++++W P A +L+ + E V+FR + G G + C
Sbjct: 10 ITRTGPKDPCGKLMRSYWQPAALVDELEGERPIRPVKLLGENLVLFRDETGRYGLIDRLC 69
Query: 253 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 307
AHR L G + G ++C +HGW + G+C + P S +N++ +S P E+ G
Sbjct: 70 AHRGADLAFGRLEHGGLRCAFHGWLFDATGQCIETPAEPKDSKLCQNIRQRSYPVVEKSG 129
Query: 308 MIWIWPGD-EPPT-ATIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 361
++W + G+ EPP I C + P F+ H +E G +D AHA +
Sbjct: 130 ILWAYLGEGEPPAFPEIDCFVAPGTHTFAFKGHMACNWLQALEVG------IDPAHASYL 183
Query: 362 H 362
H
Sbjct: 184 H 184
>gi|428226501|ref|YP_007110598.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Geitlerinema
sp. PCC 7407]
gi|427986402|gb|AFY67546.1| Rieske (2Fe-2S) iron-sulfur domain protein [Geitlerinema sp. PCC
7407]
Length = 365
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 41/189 (21%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ V++S LK + + ++R +G +++ C H+ LH G V
Sbjct: 24 NHWYAVSWSDRLKPGQVIAVTVWQQAIAVYRDTEGNVHALEDACPHKGVALHKGLVLGQN 83
Query: 269 IQCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
+ C YHGWE+ + G+C K+ PS +L K +S P ++ ++WI+PGD T P
Sbjct: 84 LACRYHGWEFDSQGECAKIPYLPPSQKLPCAKARSYPICDRYNLLWIFPGDPALAETTPV 143
Query: 325 ------------LLPPSG-FEIHAEIVME--LPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
++P +G F+ H I E + + HG L +NL +G
Sbjct: 144 PHIAEFDQPGYLMVPVTGHFKAHFSICNENSMDVFHGFLHENL---------------QG 188
Query: 370 WSVPSLVKF 378
W P LVK
Sbjct: 189 WFDPQLVKL 197
>gi|440684302|ref|YP_007159097.1| Rieske (2Fe-2S) iron-sulfur domain protein [Anabaena cylindrica PCC
7122]
gi|428681421|gb|AFZ60187.1| Rieske (2Fe-2S) iron-sulfur domain protein [Anabaena cylindrica PCC
7122]
Length = 354
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS--- 289
EP ++ R +DG V++ C HRA PL G N ++C YHGW + G C +PS
Sbjct: 35 EPVLLIRSQDGQVSAVRDICPHRAVPLSCGRFNGQEVECCYHGWRFDPAGHCVSIPSLLP 94
Query: 290 ---TQLRNVKIKSLPCFEQEGMIWIWPGD----EPPTATIPCLLPPSGFEIHAEI--VME 340
T L ++S P E +G IWI+ D +P + + + P E ++ VM
Sbjct: 95 EQDTDLSRFDVQSYPIHETQGNIWIYMTDGDKSQPSASEMDVPVVPGFAEQLPQLVEVMR 154
Query: 341 LP--IEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
P I+H + L+D AH+P+ H + + + VK P+
Sbjct: 155 FPCFIDHA--VTGLMDPAHSPYVHRVWWWRSGELHEEVKQFDPS 196
>gi|428219628|ref|YP_007104093.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Pseudanabaena sp. PCC 7367]
gi|427991410|gb|AFY71665.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena sp. PCC
7367]
Length = 391
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ VA S++L++ + E VI+R G +++TC HR L G V +
Sbjct: 61 NHWYVVALSSELQEKPLAVTFWGEAIVIYRDSKGQVHALEDTCPHRFVKLSHGCVVGDHL 120
Query: 270 QCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
+C YHGW+++ G C +P + +L N +IK + +G IW++PGD + +
Sbjct: 121 ECAYHGWQFNDQGNCAVVPYLAENQKLPNCQIKRYAVQDLDGFIWLFPGDLALAEQVEPM 180
Query: 326 LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 377
P I + ++ + L++NL+D+ H H + W+ SL+
Sbjct: 181 GVPEWDHLNYIASVTTIDTEAHYSYLIENLMDMYHG---HLHDNYQAWASASLLN 232
>gi|289674036|ref|ZP_06494926.1| iron-sulfur cluster-binding protein, Rieske family [Pseudomonas
syringae pv. syringae FF5]
gi|422668905|ref|ZP_16728757.1| iron-sulfur cluster-binding protein, Rieske family [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|330981266|gb|EGH79369.1| iron-sulfur cluster-binding protein, Rieske family [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 361
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 295
V+FR +DG P + + C HR L G + + + CPYHGW Y +G+ +PS R
Sbjct: 45 VLFRQRDGQPAALLDQCVHRGTRLSAGKITDDCLVCPYHGWRYDANGQVVHIPSVDARQG 104
Query: 296 KIKS---------LPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVM--ELPIE 344
KS EQ+G++W++ G T LP G M +
Sbjct: 105 AAKSPDYRYRQRHFAVCEQDGLVWVYTGTRDARETPIFRLPAYGERPWQSYFMVNTFDAD 164
Query: 345 HGLLLDNLLDLAHAPFTHTSTF 366
G L+ N LD+ H F H F
Sbjct: 165 VGSLVQNFLDVPHTVFVHEGIF 186
>gi|170697225|ref|ZP_02888319.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
gi|170137845|gb|EDT06079.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
Length = 334
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ A S +++ + + V++R +++ C HR PL G V
Sbjct: 3 IQNAWYAAALSDEVQREPFARTILNQKIVMYRTLANQVVALEDRCPHRQVPLSRGRVVGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPG--DEPPTATIP 323
+QC YHG Y G C +P ST + + ++ P E+ G IW+W G D+ ATIP
Sbjct: 63 DLQCWYHGLRYDCSGACVSIPSQSTIPKGARARAFPAVEKYGFIWLWTGEPDQADEATIP 122
Query: 324 CLLPPSGFEIHAEI-VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
S E+ ++ + + +DN+LD++HA F H T
Sbjct: 123 NHWVCSAPELAGKMSYCTIACSYLFGIDNILDISHAAFVHAKTLGS 168
>gi|294497580|ref|YP_003561280.1| Rieske (2Fe-2S) domain-containing protein [Bacillus megaterium QM
B1551]
gi|294347517|gb|ADE67846.1| Rieske (2Fe-2S) domain protein [Bacillus megaterium QM B1551]
Length = 335
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 121/325 (37%), Gaps = 52/325 (16%)
Query: 218 WFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
W P A+S DL D + E V+FR + I ++ C HR L LG V + I C
Sbjct: 11 WLPAAYSHDLTDQPLQVTILEERVVLFRTTNAIKA-FKDLCIHRGAALSLGKVVDDCIVC 69
Query: 272 PYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
PYHGW+Y G C K+P K + C E+ G+IW+ E +P
Sbjct: 70 PYHGWKYDDAGACVKIPQQPPGRAIPSKAKAQVYACVEKYGIIWVKMNSEAGDTPLPFYD 129
Query: 327 P--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG-----------WS-- 371
SGF+ L +++N LD++H F H + W
Sbjct: 130 EHLNSGFKTVCANPHTLQAAAPRVVENFLDVSHLAFVHEGSLGHSDYAEIPDYKVHWKDN 189
Query: 372 --VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 429
V + A G + Y RP L + + G++
Sbjct: 190 RYVSDEIAVYADADGTGNFATIYYTFEILRPTVARLKKVNY-ETGEI-----------FS 237
Query: 430 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF---MQYLWRHFAEQVLNEDLRLVLGQQE 486
L LP +K+ + FA V ++ F QY +R F + ++ +D +V Q+
Sbjct: 238 MLFAVLPEEERKSTV-------FALVSRNYSFDAPDQY-FRDFQQLIIEQDTSIVESQKP 289
Query: 487 RMNNGANVWNLPVGYDKLGVRYRLW 511
L + D+L + YR W
Sbjct: 290 EELPLDLQAELHLNPDRLSIAYRRW 314
>gi|365863184|ref|ZP_09402907.1| putative oxygenase Rieske iron-sulfur component [Streptomyces sp.
W007]
gi|364007408|gb|EHM28425.1| putative oxygenase Rieske iron-sulfur component [Streptomyces sp.
W007]
Length = 378
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+FW+PVA S ++ + E +FRG+ G +++ CAHR PL +G V+
Sbjct: 4 DFWYPVAQSRSVRGGQVAAAVFAGERMALFRGRSGAVHALEDRCAHRQVPLSMGVVDGET 63
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YH W Y DG+ ++P + + +++ P E G+++++PGD A P
Sbjct: 64 LRCCYHAWAYRGDGRISQIPYLSKGDGRPPRGVRAYPVREAYGLVFVFPGDPEKAAVTPL 123
Query: 325 LLPPSGFEIHAEIVMELP----IEHGLLLDNLLDLAHAPFTHTSTFAK 368
P GF M + + +NLLD+ H F H K
Sbjct: 124 PEVP-GFASPQYRTMAFSRTVRCHYSFMHENLLDMNHQ-FLHRGVVGK 169
>gi|358457313|ref|ZP_09167532.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357079491|gb|EHI88931.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 360
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L W+PVA S +++D + E V++R D + ++ C HR PL LG+ N
Sbjct: 28 LARHWYPVALSREVRDQPVAARLLDERLVVYRAGDAV-VVARDICPHRGVPLTLGTGNGE 86
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIW--------IWPGD 315
I C YHG + G+C +P+ + + + P E+ G++W + PG
Sbjct: 87 TIACAYHGLRFGESGRCVAIPAQPAAKIPARMTLLTYPAVERYGLVWTCLRPGQELAPGG 146
Query: 316 EPP---TATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--K 368
P A IP + GF+ E+ G L+ LD+AH F HT+TFA
Sbjct: 147 SAPDGSAAAIPRMPHWDEPGFQQVTCPAFEVAAFAGRQLEGFLDVAHFAFVHTATFADPN 206
Query: 369 GWSVPSLVKFLTPASGLQGYW 389
VP T + YW
Sbjct: 207 NSEVPDYSLTPTESGFTADYW 227
>gi|171316414|ref|ZP_02905633.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MEX-5]
gi|171098447|gb|EDT43250.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MEX-5]
Length = 334
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
++N W+ A S +++ + + V++R +++ C HR PL G V
Sbjct: 3 IQNAWYAAALSDEVQREPFARTILNQKVVMYRTLANQVVALEDRCPHRQVPLSRGRVVGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPS--TQLRNVKIKSLPCFEQEGMIWIWPG--DEPPTATIP 323
+QC YHG Y G C +PS T + + ++ P E+ G IW+W G D+ ATIP
Sbjct: 63 DLQCWYHGLRYDCSGACVSIPSQTTIPKGARARAFPAVEKYGFIWLWTGEPDQADEATIP 122
Query: 324 CLLPPSGFEIHAEI-VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
S E+ ++ + + +DN+LD++HA F H T
Sbjct: 123 NHWVCSAPELAGKMSYCTIACSYLFGIDNILDISHAAFVHAKTLGS 168
>gi|91779882|ref|YP_555090.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia xenovorans
LB400]
gi|91692542|gb|ABE35740.1| putative rieske (2Fe-2S) domain protein [Burkholderia xenovorans
LB400]
Length = 406
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 52 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTEGGKVFALEDRCAHRQVPLHQGVVDGES 111
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 315
I+C YHGW Y GKC +P + ++S PC E EG+I+++PG+
Sbjct: 112 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGN 160
>gi|405345789|ref|ZP_11022528.1| Rieske 2Fe-2S domain protein [Chondromyces apiculatus DSM 436]
gi|397093432|gb|EJJ24139.1| Rieske 2Fe-2S domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 348
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 6/137 (4%)
Query: 235 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVN-EGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
+ +FR G P + + C HR PL G V +GR+QCPYHGW + GK +LR
Sbjct: 34 YALFRDAAGQPAALADACPHRFAPLSKGKVRPDGRLQCPYHGWRFDAQGKGSNPSQPELR 93
Query: 294 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 353
+ +S E+ G +W+ D P +A +P + G+ P + LDN
Sbjct: 94 HCDARSFQVVERYGYLWLAERDTPLSA-MPDMG-DEGYVFGGAFSTHFPAPLHVSLDNFS 151
Query: 354 DLAHAPFTHTSTFAKGW 370
+ H P+ HT GW
Sbjct: 152 EDEHTPYVHTRL---GW 165
>gi|422679096|ref|ZP_16737370.1| iron-sulfur cluster-binding protein, Rieske family [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331008444|gb|EGH88500.1| iron-sulfur cluster-binding protein, Rieske family [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 361
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 295
V+FR +DG P + + C HR L G + + + CPYHGW Y +G+ +PS R
Sbjct: 45 VLFRRRDGQPAALLDQCVHRGTRLSAGKIKDDCLVCPYHGWRYDANGQVVHIPSVDARQG 104
Query: 296 KIKS---------LPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVM--ELPIE 344
KS EQ+G++W++ G T LP G M +
Sbjct: 105 AAKSPDYRYRQRRFAVCEQDGLVWVYTGTRDARETPIFRLPAYGERPWQSYFMINTFDAD 164
Query: 345 HGLLLDNLLDLAHAPFTHTSTF 366
G L+ N LD+ H F H F
Sbjct: 165 VGSLVQNFLDVPHTVFVHEGIF 186
>gi|331695267|ref|YP_004331506.1| Phthalate 4,5-dioxygenase [Pseudonocardia dioxanivorans CB1190]
gi|326949956|gb|AEA23653.1| Phthalate 4,5-dioxygenase [Pseudonocardia dioxanivorans CB1190]
Length = 448
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEPW---------VIFRGKDGIPGCVQ 249
++L GP P L+ +W P A S +L + P V FR G G +Q
Sbjct: 8 ETLCRVGPGTPMGEVLRRYWTPAALSEELPEPDCPPLRVTLLGEKLVAFRDTTGKVGLIQ 67
Query: 250 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFE 304
C HR L G E ++CPYHGW++ DG+C MPS + V+ K+ P E
Sbjct: 68 ENCPHRGASLFFGRNEECGLRCPYHGWKFDADGRCVDMPSEPPESSFKDRVRAKAYPVHE 127
Query: 305 QEGMIWIWPG 314
G++W + G
Sbjct: 128 SGGIVWTYMG 137
>gi|254415185|ref|ZP_05028947.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196177991|gb|EDX72993.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 353
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 216 NFWFPVAFSTDLKDDTMEP---W----VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N+W+ VA++ +K + P W ++R G ++N C H+ LH G V +
Sbjct: 24 NYWYSVAWANQIKPGQILPVKIWQQSIAVYRTPTGQLHALENACPHKGVELHKGIVQDEY 83
Query: 269 IQCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
+ CPYHGW++ GKC + P +L ++++ P E+ +IWI+PGD P C
Sbjct: 84 LACPYHGWQFDGAGKCVGIPYFPPEQKLPCAQVRTYPIQEKYKLIWIFPGD--PALATTC 141
Query: 325 LLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 377
LP P F + M+ + +N +D+ H F H + +GW P L +
Sbjct: 142 QLPDMPEFDHPDWFMVPVSARMK--SHFSICNENTMDVFHG-FLHQNL--QGWFDPVLKR 196
Query: 378 F 378
Sbjct: 197 L 197
>gi|224056994|ref|XP_002299108.1| predicted protein [Populus trichocarpa]
gi|222846366|gb|EEE83913.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 126/313 (40%), Gaps = 50/313 (15%)
Query: 249 QNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPS--------TQLRNVKIKS 299
N C HR PL G V++ GR+QC YHGW ++ G C +P + + +
Sbjct: 69 NNACPHRMAPLSEGRVDQWGRLQCVYHGWCFNGSGNCNFIPQAPTDGPPVSTSKKACVAV 128
Query: 300 LPCFEQEGMIWIWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLD 350
P ++W WP +P I P +P PS +I +LP + +L++
Sbjct: 129 YPSTVHHDIVWFWPNTDPQYKDIILKKQPPFIPELDDPSYIKITGS--RDLPYGYEVLIE 186
Query: 351 NLLDLAHAPFTHTSTF--------------AKGWSVPSLVKFLTPASGLQGYWDPYPIDM 396
NL+D AH P+ H +G S L G G + I+
Sbjct: 187 NLMDPAHVPYAHYGIMRTRQPKGILRLKADREGGSPVELSIKKLDIDGFIGNQVQFGIN- 245
Query: 397 EFRPPCMVLSTI------GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 450
+F PC+ + G E + + Q L + C+P S +RL++ +
Sbjct: 246 KFIAPCISYADSSPVVDQGDDAIADTEKKPSMQRREAL--IFFCVPVSPGNSRLIWAIPK 303
Query: 451 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLV-LGQQERMNNGANVWN----LPVGYDKLG 505
++ + VP +++ VL+ DL L+ L +++ M GA+ W +P D
Sbjct: 304 NYGVWIAKVP--RFIHHSVTNIVLDSDLYLLHLEERKIMEIGASNWQKACFVPAKSDAFV 361
Query: 506 VRYRLWRDALEKG 518
V +R W + G
Sbjct: 362 VGFRKWLNKYAGG 374
>gi|421870166|ref|ZP_16301803.1| Vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
H111]
gi|358070773|emb|CCE52681.1| Vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
H111]
Length = 371
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+ W+P+A+S +LK +P V+ R + G ++++CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRTESGAVYALEDSCAHRQVPLHAGVVSGET 91
Query: 269 IQCPYHGWEYSTD-GKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
++C YHGW Y+ D G+C +P + +++ PC E G+I+++PGD AT+
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRERLPNGVRAYPCREAHGLIFVFPGD----ATLAEA 147
Query: 326 LPPSGFEIHAEIVM-------ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P E + E+ + + +NL+D+ H F H +
Sbjct: 148 RPFPALESADDRAFKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|297746465|emb|CBI16521.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 37/298 (12%)
Query: 252 CAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QLRNVKIKSLPC 302
C HR PL G +++ GR+QC YHGW ++ G C+ +P + + P
Sbjct: 2 CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKACVSVYPS 61
Query: 303 FEQEGMIWIWPGDEPPTAT---------IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 353
Q ++W WP +P IP L PS + E+P + +L++NL+
Sbjct: 62 TVQNDIVWFWPNTDPQYKDILMKNKPPYIPELDDPSYTRLMGN--REIPYGYEVLIENLM 119
Query: 354 DLAHAPFTH----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCM--VLST 407
D AH P+ H T+ G + ++ L SG G + +F PPC+ V S
Sbjct: 120 DPAHVPYAHYGIMTADREGGRPLEMKIQKLD-RSGFIGKQEGG--TSKFIPPCVFYVSSD 176
Query: 408 IGISKPGKLEG--QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL 465
+ I K + ++ + + +C+P S +RL++ +F + V +++
Sbjct: 177 LFIDKTNGSASSVETKKEVQRRMLLIFICIPVSPGNSRLIWTFPRNFGVWVDRV-VPRWM 235
Query: 466 WRHFAEQVLNEDLRLVLGQQER-MNNGANVWN----LPVGYDKLGVRYRLWRDALEKG 518
+ +L+ DL L+ ++ + M+ G + W +P D V +R W + G
Sbjct: 236 FHVGQNLILDSDLYLLHVEERKIMDIGPSNWQKACFVPTKSDACVVGFRKWLNKYAGG 293
>gi|389871176|ref|YP_006378595.1| vanillate O-demethylase oxygenase [Advenella kashmirensis WT001]
gi|388536425|gb|AFK61613.1| vanillate O-demethylase oxygenase [Advenella kashmirensis WT001]
Length = 363
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ +S D+ + E V +R +DG +++ C HR PL +G + +
Sbjct: 3 LKNAWYVAEWSHDIVHELYPLQLLNEYLVFYRQQDGQVVALEDACPHRKLPLSMGRLIDD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPG--DEPPTATIPC 324
++C YHG ++ G C P ++ R +KS E+ G++W+W G D+ + IP
Sbjct: 63 AVECGYHGLTFNGQGTCIFAPGAKIPRAATVKSFATTEKYGLVWVWMGDADKADASLIPQ 122
Query: 325 LL----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 380
+ P G +++E + + DNLLD +H + H S+F V +
Sbjct: 123 IAEYGHPDWGINQGDAMIVEC--NYLYMTDNLLDPSHVAWVHRSSFGNSACVNEPLTTTV 180
Query: 381 PASGL 385
SG+
Sbjct: 181 TDSGV 185
>gi|443317166|ref|ZP_21046585.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783241|gb|ELR93162.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 351
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 26/192 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ S DLK M EP ++ R + G +++ C HRA PL G +
Sbjct: 10 LRNIWYHALPSRDLKPGQMRSKTLLNEPILLGRTQRGQAFALRDICPHRAVPLSCGRFDG 69
Query: 267 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGD----- 315
++C YHGW + +G C ++PS L ++ E +G +WI+ D
Sbjct: 70 ESVECCYHGWRFGPNGSCLQIPSLMADQTLDLSKFDVRRYDVQEVQGNVWIYMADPNPQQ 129
Query: 316 -EPPTATIPCLLPPSGFEIHAEIVMELP----IEHGLLLDNLLDLAHAPFTHTSTFAKGW 370
PP +P +P + +I +P ++H ++ L+D AH+PF H + + +G
Sbjct: 130 VHPPRFEVP-RIPGFPEDAQPQISYTMPFSCFVDHAVV--GLMDPAHSPFVHRAWWWRGG 186
Query: 371 SVPSLVKFLTPA 382
++ +K+ P+
Sbjct: 187 NLNPEIKWFDPS 198
>gi|295700277|ref|YP_003608170.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295439490|gb|ADG18659.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 417
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 20/190 (10%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQNT 251
L G P ++ FW P S+++++ P V FR DG G ++
Sbjct: 10 LTQVGKGTPNGDMIRQFWIPALLSSEIQEPGGAPKRVRLLGEDLVAFRDSDGKVGLLEEQ 69
Query: 252 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQE 306
C HR L LG +EG ++C YHGW+++ DG+C P S +K + P E
Sbjct: 70 CPHRRASLALGDNSEGGLRCLYHGWKFAVDGQCMDTPTEPEDSKLCSRIKAVAYPVREVA 129
Query: 307 GMIWIWPGDEPPTATIP--CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 364
G+IW + GD P L ++ A V+E + ++ +D AHA H
Sbjct: 130 GVIWTYMGDPAKVPQFPDFDFLSYPAEKVAAFKVLE-DCNYAQAVEGTIDSAHAGVLHRE 188
Query: 365 TFAKGWSVPS 374
+ WS P+
Sbjct: 189 ---QPWSAPA 195
>gi|167590452|ref|ZP_02382840.1| Rieske (2Fe-2S) domain protein [Burkholderia ubonensis Bu]
Length = 371
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+ W+P+A+S ++K +P V+ R G +++ CAHR PLH G V
Sbjct: 31 DHWYPLAWSREVKRGGTLGVRFAGDPIVLVRTASGAVFALEDRCAHRQVPLHAGVVTGES 90
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
I+C YHGW Y G+C +P + +++ PC E G+I+++PGD P
Sbjct: 91 IRCCYHGWTYDCTGRCIDVPYLGRERLPNGVRAYPCREVHGLIFVFPGDAALAGERPLPE 150
Query: 327 PPSGFEIHAE---IVMELPIEHGLLLDNLLDLAH 357
PS + + E+ + + +NL+D+ H
Sbjct: 151 LPSAEDSAYKTRRFGREVKCHYSFMHENLMDMNH 184
>gi|404213336|ref|YP_006667511.1| Phenylpropionate dioxygenase-related ring- hydroxylating
dioxygenase, large terminal subunit [Gordonia sp. KTR9]
gi|403644135|gb|AFR47375.1| Phenylpropionate dioxygenase-related ring- hydroxylating
dioxygenase, large terminal subunit [Gordonia sp. KTR9]
Length = 425
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 22/182 (12%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQNTCAHR 255
GP ++N+W P S+ L +P +V FRG+DG+ G + C HR
Sbjct: 13 GPGTAMGAVVRNYWLPAFPSSRLPATDSDPIRVRLFGENYVAFRGEDGVIGFLDELCPHR 72
Query: 256 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---STQLRN-VKIKSLPCFEQEGMIWI 311
PL LG I+C YHGW+ TDG + P S+ +RN +K + P E G++W+
Sbjct: 73 GAPLVLGHQEGCAIRCLYHGWKIGTDGTVLETPNADSSAIRNGLKANAFPVEESHGLVWV 132
Query: 312 WPGDEPPTATIPCLLPPSGFEIHA---EIVMELPIEHGLL--LDNLLDLAHAPFTHTSTF 366
+ G + P P +E+ +V+++ + + L+ LLD +HA H
Sbjct: 133 YLGTQDPVPPRPRY----AWEMEKPENTLVVDVDWDCNWVQALEGLLDSSHAGILHADIL 188
Query: 367 AK 368
K
Sbjct: 189 KK 190
>gi|254438166|ref|ZP_05051660.1| Rieske (2Fe-2S) domain protein [Octadecabacter antarcticus 307]
gi|198253612|gb|EDY77926.1| Rieske (2Fe-2S) domain protein [Octadecabacter antarcticus 307]
Length = 346
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMEPWV------IFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ A++ ++ D + V +FR + G +++ C HR PL G +
Sbjct: 3 LKNAWYVAAWNHEVTRDLQQITVLGENVCVFRSEAGELVGLEDACPHRKLPLSKGRIKGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
++C YHG + G+C P T N ++ + P E+ G++WIW G+ P A + +
Sbjct: 63 TVECGYHGLTFDCAGQCVWAPGTGRIPSNARVHAYPLHEKYGLVWIWMGN-PALADVTDI 121
Query: 326 LPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
+ ++ MEL + L+ DNLLD H + H ++FA
Sbjct: 122 FEIENYGNPAWGMNRGDAMELDCNYLLMCDNLLDPTHVAWVHQNSFA 168
>gi|126444508|ref|YP_001063880.1| PrnD [Burkholderia pseudomallei 668]
gi|126223999|gb|ABN87504.1| PrnD [Burkholderia pseudomallei 668]
Length = 370
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 89/226 (39%), Gaps = 25/226 (11%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
TR+ W+ S DLKD E P V +RG G + CAH L G V
Sbjct: 22 TTRVAASWYVAMRSDDLKDKPTELTLFGRPCVAWRGATGRAVVMDRHCAHLGANLADGRV 81
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLP---------CFEQEGMIWIWPGD 315
+G IQCP+H W Y G+C +P L +++ +P E+ G +W+W G
Sbjct: 82 KDGCIQCPFHHWRYDEQGQCVDIPGHSLAVRRLEPVPRGARQPTWVTAERYGYVWVWYGS 141
Query: 316 EPPTATIPCLLPP---SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT---STFA-- 367
P +P + +G +H E +++N D HA H S F
Sbjct: 142 PQPLHPLPEIAAADVDNGDFMHLHFAFETTTAVLRIVENFYDAQHANPVHALPISAFELK 201
Query: 368 --KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 411
W V+ L A G + +D F P M+ +G+S
Sbjct: 202 LFDDWREWPEVESLARAGAWFGAGIDFTVDRYFGPLGMLSRALGLS 247
>gi|226363504|ref|YP_002781286.1| vanillate demethylase oxygenase subunit [Rhodococcus opacus B4]
gi|226241993|dbj|BAH52341.1| putative vanillate demethylase oxygenase subunit [Rhodococcus
opacus B4]
Length = 355
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 142/343 (41%), Gaps = 50/343 (14%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG-- 262
+T +N W+ A+ ++ + EP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTICEEPILFWRTEAGEAVAMSDRCVHRRYPLSEAPS 61
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPT 319
++ + C YHG+ Y +DG C +P + R +++ EQ+ +W+W D + P
Sbjct: 62 RLDGDTVVCGYHGFTYGSDGGCVFVPGQKRVPRTARLRQYQVVEQDSFVWVWIADPDNPE 121
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH------------ 362
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 122 QGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAET 181
Query: 363 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL-----S 406
T+ + +V + + F + ++G++G + D+E+ PPC+ L +
Sbjct: 182 PITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRIA 240
Query: 407 TIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLW 466
IG PG T A H ++ PS+ T + ++ DFA L +L
Sbjct: 241 PIGAPLPGD---DGTDPHAFHSEIVYAITPSTENSTLDFWAVARDFA--LGDDAVTTFLA 295
Query: 467 RHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
+ V+ + + L + QQ L + D G+ R
Sbjct: 296 ENNRTVVMQDVVALNILQQALDTEQDGYQELSINIDAGGLGAR 338
>gi|443316742|ref|ZP_21046175.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783653|gb|ELR93560.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 362
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 216 NFWFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
N W+ VA + ++ D + V+FR ++ +++ C HR L G V G
Sbjct: 28 NHWYAVARADEVTADKPRGVTLWQQKIVLFRDRNHQVQALEDRCPHRQVQLSHGEVVNGE 87
Query: 269 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT--- 321
++C YHGW + G C +P + +L ++ P EQ+G IW++PGDE A
Sbjct: 88 VECVYHGWRFDATGACTHVPYLGEAQKLPTCTLRRYPVREQDGFIWVFPGDEARLAAEKI 147
Query: 322 IPCLLPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHA 358
P LP + V + +E + L++NL+D+ H
Sbjct: 148 EPLALPEWDHLNYIATVSLIDVESHYSFLIENLMDMYHG 186
>gi|365899361|ref|ZP_09437272.1| putative phthalate 4,5-dioxygenase oxygenase subunit (OhpA2)
[Bradyrhizobium sp. STM 3843]
gi|365419884|emb|CCE09814.1| putative phthalate 4,5-dioxygenase oxygenase subunit (OhpA2)
[Bradyrhizobium sp. STM 3843]
Length = 439
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTM--------EPWVIFRGKDGIPGCVQNTCAHRA 256
G P + +W P S DL D E V FR +G G V+ C HR
Sbjct: 14 GKGTPLGELFRLYWIPFLPSADLVTDGQPKRIRLLGEDLVAFRDSEGRVGLVEQACPHRG 73
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIWI 311
P+ + ++C YHGW++ G MP+ +R+ V IK+ PC E+ GMIW
Sbjct: 74 APMVFARNEDCGLRCVYHGWKFDVSGAVTDMPAEPVRSRLKERVGIKAYPCKERNGMIWT 133
Query: 312 WPGDE----PPTATIPCLLPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTST 365
+ G E PP + L P ++H + ++ E L ++ +D AHAP H
Sbjct: 134 YMGPEQTELPPLPNLEWNLVPQD-QVHISVRVQ---ECNWLQAVEGEIDSAHAPLLHGRL 189
Query: 366 FAKG 369
A+G
Sbjct: 190 DAQG 193
>gi|91779910|ref|YP_555118.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
xenovorans LB400]
gi|91692570|gb|ABE35768.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
xenovorans LB400]
Length = 363
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 197 PRKSLNVSGPVQPY-NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQ 249
P + + P+Q Y N L+N+W+PVA S + D + + V++R K+G ++
Sbjct: 4 PNTTQGAADPIQSYLNQGLRNYWYPVAPSWQVGDAPVGITRLGDQIVLWRDKEGKVRALE 63
Query: 250 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ---LRNVK-IKSLPCFEQ 305
+ C HR L LG G + C YHG E G K+P+ L K +KS P E
Sbjct: 64 DRCPHRGARLSLGWNLGGSVACWYHGIEVDGGGTVTKVPAVSNCPLEGQKCVKSYPVEEH 123
Query: 306 EGMIWIWPGDEPPTATIPCLLPPS--GFEIHAEIVM-ELPIEHGLLLDNLLDLAHAPFTH 362
G I++W GD+ P +LP G E + + M + +DN++D H + H
Sbjct: 124 AGAIFLWFGDDAHKEPAPLVLPEELVGEEYASFLCMSHWKCNYQYAIDNVMDPMHGAYLH 183
Query: 363 TSTFA 367
++ +
Sbjct: 184 ATSHS 188
>gi|414873471|tpg|DAA52028.1| TPA: putative pheophorbide a oxygenase [Zea mays]
Length = 523
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 124/300 (41%), Gaps = 52/300 (17%)
Query: 250 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQL--------RNVKIKSL 300
+ C HR PL G +++ GR+QC YHGW + G C+ +P + S
Sbjct: 122 DACPHRLAPLSEGRIDDRGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSSRACVASY 181
Query: 301 PCFEQEGMIWIWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLDN 351
PC Q ++W +P +P + + P L+P P ++ + +LP + +L++N
Sbjct: 182 PCVVQNNILWFYPRADPEHSDVLQRKRPPLIPEIDDPDFVTVYG--IRDLPYGYDILVEN 239
Query: 352 LLDLAHAPFTHTST--------------FAKGWSVPSLVKFLTPASGLQGYWDPYPID-M 396
L+D AH P+ H + K P VK + ++G+ P
Sbjct: 240 LMDPAHVPYAHKGIMRGIRKKEDPGRVDYDKEGGGP--VKMKIEQANIEGFVSPQERGYF 297
Query: 397 EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVL 456
+F PC T + + K A + + C+P ++R+++ + L
Sbjct: 298 QFVAPCTFFGTPFVQEKKK---------APRVMLVFFCIPVGPGRSRVIWAFPRNVGVWL 348
Query: 457 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQER-----MNNGANVWNLPVGYDKLGVRYRLW 511
H+ ++L+ +L+ D+ L+ ++ + ++N +P D + V +R W
Sbjct: 349 HHIT-PRWLYHVGQNLILDSDIFLLHVEERKFAAAGLDNWQRACYVPTSSDAMVVAFRNW 407
>gi|399154200|ref|ZP_10754267.1| iron-sulfur protein [gamma proteobacterium SCGC AAA007-O20]
Length = 456
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACP 258
G P L+ +W PV S+DL + + E V+FR K G G V C HR
Sbjct: 34 GRGTPAGEYLRRYWQPVFISSDLTELPVAIKILGEELVLFRDKSGQLGLVHKHCPHRQAS 93
Query: 259 LHLGSVNEGRIQCPYHGWEYSTDGKCEKMP------STQLRN-VKIKSLPCFEQEGMIWI 311
L G E IQC YHGW Y DG ++P + ++N V++ + P FE +G+I+
Sbjct: 94 LEFGICREKGIQCCYHGWHYDVDGTLIEVPGQPTATADMIKNKVRLGAYPTFEFKGLIFA 153
Query: 312 W--PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTSTFA 367
+ P DE P I L FE + + P L LD ++D H F H++
Sbjct: 154 YLGPIDEKPEFPIYDSLE---FEDMEMVPYKAPFNCNWLQVLDAIVDPIHTAFLHSNMSR 210
Query: 368 KGWSV 372
+ +SV
Sbjct: 211 QQFSV 215
>gi|134278510|ref|ZP_01765224.1| PrnD [Burkholderia pseudomallei 305]
gi|134250294|gb|EBA50374.1| PrnD [Burkholderia pseudomallei 305]
Length = 370
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 89/226 (39%), Gaps = 25/226 (11%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 264
TR+ W+ S DLKD E P V +RG G + CAH L G V
Sbjct: 22 TTRVAASWYVAMRSDDLKDKPTELTLFGRPCVAWRGATGRAVVMDRHCAHLGANLADGRV 81
Query: 265 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLP---------CFEQEGMIWIWPGD 315
+G IQCP+H W Y G+C +P L +++ +P E+ G +W+W G
Sbjct: 82 KDGCIQCPFHHWRYDEQGQCVDIPGHSLAVRRLEPVPRGARQPTWVTAERYGYVWVWYGS 141
Query: 316 EPPTATIPCLLPP---SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT---STFA-- 367
P +P + +G +H E +++N D HA H S F
Sbjct: 142 PQPLHPLPEIAAADVDNGDFMHLHFAFETTTAVLRIVENFYDAQHANPVHALPISAFELK 201
Query: 368 --KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 411
W V+ L A G + +D F P M+ +G+S
Sbjct: 202 LFDDWREWPEVESLARAGAWFGAGIDFTVDRYFGPLGMLSRALGLS 247
>gi|302381678|ref|YP_003817501.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Brevundimonas subvibrioides ATCC 15264]
gi|302192306|gb|ADK99877.1| Rieske (2Fe-2S) iron-sulfur domain protein [Brevundimonas
subvibrioides ATCC 15264]
Length = 370
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 27/172 (15%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG- 267
+ W+ VA S D+ ++ EP ++ R +DG +++ C HRA PL G + +
Sbjct: 27 DTWYFVALSRDVAVASLKRHELLGEPVLVGRRRDGQVYAMRDICPHRAAPLSAGRLVQKP 86
Query: 268 ----RIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEP 317
++CPYHGW + TDG C +PS + ++++S P E +GM++++ +P
Sbjct: 87 GEPEAVECPYHGWRFGTDGVCAAIPSLVDDQPYEADRIRVRSYPVAESQGMVFVYVRSDP 146
Query: 318 PTATIPCLLPPS-----GFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTH 362
+ P PP+ G E M+ I+H ++ L+D AH P+ H
Sbjct: 147 RSDAAPDHPPPTFPGVVGGEAKLVEWMDFDSHIDHAVV--GLMDPAHGPYVH 196
>gi|86749031|ref|YP_485527.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
gi|86572059|gb|ABD06616.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
Length = 347
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 101/250 (40%), Gaps = 41/250 (16%)
Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 295
V++R DG +++ C HR PL G + + C YHG ++S G+C MPS + N
Sbjct: 33 VMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKFSPQGRCTYMPSQETINP 92
Query: 296 K--IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP-----------SGFEIHAEIVMELP 342
++S P E+ +W+W GD P P L+P G IHA
Sbjct: 93 SACVRSYPVVERHRFVWLWMGD--PALADPALVPDMHWNDDPAWAGDGKTIHAR------ 144
Query: 343 IEHGLLLDNLLDLAHAPFTHTSTFAKG------WSVPSLVKFLTPASGLQG-----YW-- 389
+ L++DNL+DL H + H S+ + V + +T ++G +W
Sbjct: 145 CDWRLVVDNLMDLTHETYVHGSSIGNEAVAEAPFDVTHGDRTVTVTRWMRGIEAPPFWAA 204
Query: 390 ---DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKT 442
P P+D + F P V +G++ G + R + L+ P +
Sbjct: 205 QLRKPGPVDRWQIIRFEAPGTVTIDVGVAPAGSGAPEGDRSQGVNGFVLNTMTPETDTTC 264
Query: 443 RLLYRMSLDF 452
+ ++
Sbjct: 265 HYFWAFVRNY 274
>gi|78061637|ref|YP_371545.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
gi|77969522|gb|ABB10901.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
Length = 351
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 184 TSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVI 237
T Q + + + + P + + V+ + L +W PVAF+T++ D + E V+
Sbjct: 2 THTQVVPLTRSRAPVPPRHCTFDVRDWEI-LSRYWHPVAFATEVGDRPLAVTLLDERIVL 60
Query: 238 FRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ----LR 293
FR I ++ C HR PL G V E R+ CPYHG EY+ DGKC ++PS
Sbjct: 61 FRSGGAIVAA-RDVCPHRGAPLSRGWVVEDRLVCPYHGLEYAADGKCVRIPSQPDGPIPE 119
Query: 294 NVKIKSLPCFEQEGMIWI-WPGDEPPTATIPC--------LLPPSGFEIHAEIVMELPIE 344
+ + + + G++W+ G E P P +LPPS +++
Sbjct: 120 RLCLTTYAAQQAYGLVWVSLGGGELPLPDFPAWNAEGFQQILPPS---------IDIRAS 170
Query: 345 HGLLLDNLLDLAHAPFTHTSTFA 367
G + +D+AH + H +FA
Sbjct: 171 AGRQTEGFIDVAHFAWIHHESFA 193
>gi|110680835|ref|YP_683842.1| vanillate O-demethylase oxygenase [Roseobacter denitrificans OCh
114]
gi|109456951|gb|ABG33156.1| vanillate O-demethylase oxygenase, putative [Roseobacter
denitrificans OCh 114]
Length = 346
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
LKN W+ A+ ++ + E +FR + G +++ C HR PL G +
Sbjct: 3 LKNAWYVAAWDHEITRELQQITVLGEKICVFRSESGELVGLEDACPHRKLPLSKGRIKGD 62
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
++C YHG ++ G+C P + N K+ + P E+ G++WIW G+ P A +
Sbjct: 63 TVECGYHGLTFNCVGQCVWAPGSGGIPSNAKVHAYPLHEKYGLVWIWMGN-PALADPADI 121
Query: 326 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
++ I+ MEL + L+ DNLLD H + H S+FA
Sbjct: 122 FEIENYDNPAWGINRGAAMELDCNYLLMCDNLLDPTHVAWVHQSSFA 168
>gi|428771008|ref|YP_007162798.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
gi|428685287|gb|AFZ54754.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
Length = 468
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 125/322 (38%), Gaps = 58/322 (18%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMEPWVI--------FRGKDGIPGCVQNTCAHRA 256
G P K W+PV F DL D + + + KD Q+ C HR
Sbjct: 21 GGEDPNKFDYKEVWYPVFFVNDLHKDKPSRFTLLDEDLVIWWDKKDQQWRVFQDMCPHRL 80
Query: 257 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLPCFEQEGM 308
PL G ++E G ++CPYHGW +S G C+ +P + +KS P M
Sbjct: 81 APLSTGRIDEDGLLECPYHGWTFSGKGDCQSIPQQPEGENRHKSPRACVKSYPSAIAHDM 140
Query: 309 IWIWPGDE------PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
++++ G + P T P + + I + ++P + LL+N+LD +H +TH
Sbjct: 141 LFVYAGKKENAFLTPMPITQPLIENVEKWTI-LKTFRDIPYDALTLLENVLDSSHVSYTH 199
Query: 363 TSTFA-KGWSVPSLVKFLTP-ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 420
T + + P ++ T G G+W P + GKL Q+
Sbjct: 200 HGTVGNRSNAAPVELEVKTADRQGFTGFWAEGP------------------RKGKLGSQS 241
Query: 421 TRQCATHL--HQLH-----------VCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYL 465
T A +L H L P S+ K R+ FAS + +
Sbjct: 242 TTFIAPNLMWHDLTSKQLGRTMTVVYVTPISKGKCRVFALFPFQFASKIPQFFIKLTPQW 301
Query: 466 WRHFAEQVLNEDLRLVLGQQER 487
+ H + + ED ++ L QER
Sbjct: 302 YSHLNQNTILEDDQIFLHYQER 323
>gi|385206189|ref|ZP_10033059.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
gi|385186080|gb|EIF35354.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
Length = 363
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 197 PRKSLNVSGPVQPY-NTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQ 249
P + + P+Q Y N L+N+W+PVA S + D + + V++R K+G ++
Sbjct: 4 PNTTQGAADPIQSYLNKGLRNYWYPVAPSWQVGDAPVGITRLGDQIVLWRDKEGKVRALE 63
Query: 250 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ---LRNVK-IKSLPCFEQ 305
+ C HR L LG G + C YHG E G K+P+ L K +KS P E
Sbjct: 64 DRCPHRGARLSLGWNLGGSVACWYHGIEVDGGGTVTKVPAVSNCPLEGQKCVKSYPVEEH 123
Query: 306 EGMIWIWPGDEPPTATIPCLLPPS--GFEIHAEIVM-ELPIEHGLLLDNLLDLAHAPFTH 362
G I++W GD+ P +LP G E + + M + +DN++D H + H
Sbjct: 124 AGAIFLWFGDDAHKEPAPLVLPEELVGEEYASFLCMSHWKCNYQYAIDNVMDPMHGAYLH 183
Query: 363 TSTFA 367
++ +
Sbjct: 184 ATSHS 188
>gi|392978443|ref|YP_006477031.1| (hypo)xanthine hydroxylase [Enterobacter cloacae subsp. dissolvens
SDM]
gi|392324376|gb|AFM59329.1| (hypo)xanthine hydroxylase [Enterobacter cloacae subsp. dissolvens
SDM]
Length = 344
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 128/304 (42%), Gaps = 48/304 (15%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA + D+ + E VI+R KD + ++ C HR PL LG +E
Sbjct: 20 RLAKCWHPVARACDIGAAPVKATLLDEALVIYRVKDQV-VVARDVCPHRGVPLSLGFHDE 78
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEPP 318
I CPYHG + DG+C ++PS+ + V K + E+ G+IW P + P
Sbjct: 79 HGIICPYHGLRFGEDGRCNRIPSSPDQPVPAKLNLINYAVEERFGLIWTCLAFDPDNPVP 138
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 376
T+P GF+ E+ G ++ LD+AH + HTSTFA VP+
Sbjct: 139 LPTMP-HWDDDGFQQINCPAFEVNGFAGRQVEGFLDVAHFAWIHTSTFADPDNQLVPTYQ 197
Query: 377 KFLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNT 421
TP + YW YP + + P +T+ I PG+
Sbjct: 198 PQETPFGFVADYWSSVSNYPASSDVQAPEGFQWLRHFEMHLPFTATLTIHFPGE------ 251
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
+ L ++ P S + TR+ ++ +F H+P + F ++ ED +V
Sbjct: 252 ----SRLVIMNAASPVSSRVTRMFAPIARNFD---LHIPVEEV--HAFNLRIFEEDRLMV 302
Query: 482 LGQQ 485
Q+
Sbjct: 303 ETQR 306
>gi|21241085|ref|NP_640667.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21106382|gb|AAM35203.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citri str. 306]
Length = 350
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 132/334 (39%), Gaps = 55/334 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVN 265
RL W VA S+++ + EP V++R G + + ++ C HR PL +G+ +
Sbjct: 21 RLAQHWHAVALSSEVSEAPFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMGTAD 78
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 321
G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+ +
Sbjct: 79 GGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAGVSD 138
Query: 322 IPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWSVP 373
+PP GF+ ++ L+ +D+AH F T+TFA+ VP
Sbjct: 139 ADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVRTATFAQPDKREVP 198
Query: 374 SLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKPGK 415
+ TP Y Y +DM E P TI PGK
Sbjct: 199 AYTTTETPTGFNADYLSTVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPVPGK 258
Query: 416 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 475
L ++ P S+ TRLL ++ +F + H+P F +V
Sbjct: 259 -----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLRVFE 302
Query: 476 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
ED +V Q+ + + + D+ + YR
Sbjct: 303 EDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|70733421|ref|YP_263196.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas protegens
Pf-5]
gi|68347720|gb|AAY95326.1| Rieske 2Fe-2S domain protein [Pseudomonas protegens Pf-5]
Length = 338
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 21/162 (12%)
Query: 218 WFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
W+PVA S L + P V+FR DG + + C HR PL G V +G++QC
Sbjct: 7 WWPVALSRQLHKQPLACTLHGVPLVLFRDADGAAAVLPDRCPHRFAPLSAGRVRDGQLQC 66
Query: 272 PYHGWEYSTDGKCEKMPSTQLRNVK---IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP 328
PYHGW + G+C ++P + + ++ L E +G++W E P A PP
Sbjct: 67 PYHGWRFDPQGRCTQLPGQEQQRCSQPLLQPLHSCEAQGLVWASLASERPNA------PP 120
Query: 329 SGFEIHAEIVMELPIEHGL------LLDNLLDLAHAPFTHTS 364
A+ + I + +N LD H F H
Sbjct: 121 VAAAEQAQALDVFWISDRVQCSLQDAAENFLDGFHTHFVHAG 162
>gi|295702951|ref|YP_003596026.1| Rieske (2Fe-2S) domain-containing protein [Bacillus megaterium DSM
319]
gi|294800610|gb|ADF37676.1| Rieske (2Fe-2S) domain protein [Bacillus megaterium DSM 319]
Length = 335
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 119/329 (36%), Gaps = 52/329 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L W P A+S D+ D + E V+FR + I ++ C HR L LG V +
Sbjct: 7 LAKEWLPAAYSHDVTDQPLQVTILEERVVLFRTTNAIKA-FKDLCIHRGAALSLGKVVDD 65
Query: 268 RIQCPYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 322
I CPYHGW+Y G C K+P K + C E+ G+IW+ E +
Sbjct: 66 CIVCPYHGWKYDDAGACVKIPQQPPGRAIPSKAKAQVYDCVEKYGIIWVKMNSEAGDTPL 125
Query: 323 PCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG----------- 369
P SGF+ L +++N LD++H F H +
Sbjct: 126 PLYDEHLNSGFKTVCASPHTLQAAAPRVVENFLDVSHLAFVHEGSLGHSDYAEIPDYKVH 185
Query: 370 WS----VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCA 425
W V + A G + Y RP L + +
Sbjct: 186 WKDNRYVSDEIAVYADADGTGNFATIYYTFEILRPTVARLKKV------------NHETG 233
Query: 426 THLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF---MQYLWRHFAEQVLNEDLRLVL 482
L LP +K+ + FA V ++ F QY +R F + ++ +D +V
Sbjct: 234 EIFSMLFAVLPEEERKSTV-------FALVSRNYSFDAPDQY-FRDFQQLIIEQDTSIVE 285
Query: 483 GQQERMNNGANVWNLPVGYDKLGVRYRLW 511
Q+ L + D+L + YR W
Sbjct: 286 SQKPEELPLDLQAELHLNPDRLSIAYRRW 314
>gi|356512495|ref|XP_003524954.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 529
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 57/304 (18%)
Query: 250 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QLRNVKIKSL 300
+ C HR PL G +++ GR+QC YHGW ++ G+C+ +P + + +
Sbjct: 126 DACPHRLAPLSDGRIDQWGRLQCVYHGWCFNGKGECQLIPQALPDGPPVHTSKKACVAAY 185
Query: 301 PCFEQEGMIWIWPGDEPPTATI-----PCLLPPSGFEIHAEIV--MELPIEHGLLLDNLL 353
P Q ++W WP +P I P +P + + + ++P + +L++NL+
Sbjct: 186 PSTVQNDILWFWPNTDPQYKDIITRKRPPFIPEIDDPSYTKSMGNRDIPYGYEVLIENLM 245
Query: 354 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD-PYPIDM---------------- 396
D AH P+ H TP ++ + P+DM
Sbjct: 246 DPAHVPYAHYGLMR------------TPQPKVKADREGGRPLDMSIEKLDINGFSANQAW 293
Query: 397 ---EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 453
+F PPC+ + +P + + VC+P S K+RL++ +F
Sbjct: 294 GKSKFMPPCIFYAYTP-DQPASSGETKKSSAKKKMCLIFVCVPVSPGKSRLIWCFPRNFG 352
Query: 454 SVL-KHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNN-GANVWN----LPVGYDKLGVR 507
+ K VP ++++ +L+ DL L+ ++ ++ + G N W+ +P D L +
Sbjct: 353 LWMDKIVP--RWIFHVGQNLILDSDLYLLHVEEHKLKDIGPNNWHKACFVPTKSDALVIG 410
Query: 508 YRLW 511
YR W
Sbjct: 411 YRTW 414
>gi|295700594|ref|YP_003608487.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295439807|gb|ADG18976.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 396
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 21/169 (12%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 42 DYWYPLAWSHEVKRGKTLGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 101
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 326
I+C YHGW Y G C +P + ++S PC E EG+++++PGD A +
Sbjct: 102 IRCGYHGWTYDCSGTCIDVPYLGRERLPNGVRSYPCQEVEGLVFVFPGD----AALAEER 157
Query: 327 PPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P GF ++ + + + +NL+D+ H F H +
Sbjct: 158 PLPGFRSVSDPKYKTRRFGRPVKCHYSFMHENLMDMNHQ-FLHRRQMGQ 205
>gi|186684792|ref|YP_001867988.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186467244|gb|ACC83045.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 340
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 27/202 (13%)
Query: 213 RLKNFWFPVAFSTDLKDDTMEP------WV-IFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
+ +FW+ VA S L+ + + P W+ IFRG+DG P +++ C HR L G +
Sbjct: 2 QFADFWYIVALSNQLQPNKVLPRTVLGEWLAIFRGEDGQPVALRDRCLHRNSRLSSGKIC 61
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPS--TQLRNVKIKSLPCF---EQEGMIWIWPGDEPPTA 320
G +QCPYHGW Y G +P+ + + C+ EQ+G +++ D P
Sbjct: 62 NGALQCPYHGWVYDGVGNVIAVPAEGNDFKPSPQRRAKCYATKEQDGYVYVRLADTPSVD 121
Query: 321 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF----------- 366
P +P +G+E ++ +N +D+ H F H F
Sbjct: 122 FEPFSMPHYGQTGWET-VRVINRFANNVTNCAENFIDIPHTAFVHPGVFRTSRQQKLEMT 180
Query: 367 AKGWSVPSLVKFLTPASGLQGY 388
+ W+ LV++ S L Y
Sbjct: 181 VERWNGSVLVEYRNENSNLGWY 202
>gi|240137223|ref|YP_002961692.1| rieske 2Fe-2S family protein [Methylobacterium extorquens AM1]
gi|418060776|ref|ZP_12698672.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methylobacterium
extorquens DSM 13060]
gi|240007189|gb|ACS38415.1| putative rieske 2Fe-2S family protein [Methylobacterium extorquens
AM1]
gi|373565667|gb|EHP91700.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methylobacterium
extorquens DSM 13060]
Length = 361
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 132/346 (38%), Gaps = 48/346 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L N W+ ++ + M E V+ R KDG +++ C HR L G +
Sbjct: 24 LSNAWYCAGRASAVVGGKMRAVALNGEQVVLGRAKDGSLFALRDRCPHRGMALSKGKFDG 83
Query: 267 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 320
+ CP+HGW + TDG+C +P+ + + ++ P E G +W+ P P
Sbjct: 84 DTLICPFHGWRFGTDGRCRDVPTLSAHDASDFSRIAVQRFPIVESAGFLWVNPHLGPSDP 143
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD--NLLDLAHAPFTH-TSTFAKGWSVPSLVK 377
+P FE +V+EL +E L +L+D H F H T F + VK
Sbjct: 144 GAVPAVPSLDFEPAGCLVLELEVEASFDLTTLSLVDPGHVAFVHDTWWFRPSKELREKVK 203
Query: 378 FLTP--------------ASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQNTR 422
P +S + P +++EFR P + L I +
Sbjct: 204 TFQPVPHGFVMTSHATTTSSPVYRLLGGAPEVEIEFRLPGVRLERI-------------K 250
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 482
A + P +T L +S ++ P + L R F L +D +++
Sbjct: 251 AGAKRVANYTFATPMGPNRTMLTNALSWSMPALNLLKPIARPLMRQF----LTQDQQVLQ 306
Query: 483 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
Q ++ + L G +RL R+ALE + PF P+
Sbjct: 307 HAQAGLDRKPTMVLLGQGDLPSQWYFRLKREALEAARESRPFANPL 352
>gi|399078115|ref|ZP_10752715.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398034053|gb|EJL27330.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 338
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 123/312 (39%), Gaps = 57/312 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L N W+ A++ ++ P + +R DG +++ C HR PL +G + +G
Sbjct: 4 LYNAWYVAAWAHEIDQTFFTRTLLDLPVLFYRKPDGQVVAMEDACPHRFAPLSMGVLVDG 63
Query: 268 RIQCPYHGWEYSTDGKC--EKMPSTQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTATIP 323
+++C YHG E+ G C + + ++++ P FEQ+ +IWIW PG PT I
Sbjct: 64 KVRCGYHGLEFDEHGACVGSCINVVAPKAARVRTFPVFEQDNIIWIWMGPGPAGPTEAI- 122
Query: 324 CLLPPSGFEIHAEIVMELPI--------EHGLLLDNLLDLAHAPFTHT-----------S 364
F H + + P+ ++ L DNL+DL H H
Sbjct: 123 -----VRFPFHTDSALR-PVFGVSAAKADYRLFSDNLMDLTHTAMLHPLFGGLNYQPKFR 176
Query: 365 TFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG------KLEG 418
++ +G V S P+S L G P + TI PG ++
Sbjct: 177 SWEEGDDVVSEYTSEAPSSMLVG-----------DTPVTGVDTIRWRAPGIHSLLTRVTP 225
Query: 419 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 478
++ A + H+ P + T + +L S + F+ L + F +ED
Sbjct: 226 KDAAFQAAEMPAAHIVTPETATSTHYFWASALPKDSPVSSEAFLASLTQVFD----HEDK 281
Query: 479 RLVLGQQERMNN 490
++ Q RM
Sbjct: 282 PMIEAVQRRMGQ 293
>gi|374367995|ref|ZP_09626051.1| Rieske (2Fe-2S) domain-containing protein [Cupriavidus basilensis
OR16]
gi|373100508|gb|EHP41573.1| Rieske (2Fe-2S) domain-containing protein [Cupriavidus basilensis
OR16]
Length = 429
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQNTCAH 254
+GP ++ FW P+A S+D+ EP +V++R + G PG C H
Sbjct: 13 TGPNTAMGNTMRRFWLPIAQSSDMPTPNGEPQTIEVLGERFVVWRDQQGRPGLYAEGCLH 72
Query: 255 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST---QLRN-VKIKSLPCFEQEGMIW 310
R + L ++C YHGW+++ DG + P+ + ++ VK ++ P E G++W
Sbjct: 73 RGASMQLARSEGDGLRCIYHGWKFAVDGTVLETPNVVDPKFKDRVKGRTYPVRETGGIVW 132
Query: 311 IW---PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
+ G+EPP P + P I+ ++ + +++ L+D +H H S +
Sbjct: 133 AYLGPRGEEPPFPHWPFMDLPDSNRINVRAIVN--CNYVQVIEGLVDSSHLTVLHGSALS 190
Query: 368 K 368
K
Sbjct: 191 K 191
>gi|374309126|ref|YP_005055556.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Granulicella
mallensis MP5ACTX8]
gi|358751136|gb|AEU34526.1| Rieske (2Fe-2S) iron-sulfur domain protein [Granulicella mallensis
MP5ACTX8]
Length = 383
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 133/315 (42%), Gaps = 46/315 (14%)
Query: 218 WFPVAFSTDLK-DDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
W+P ++ LK DT P ++ R DG +++ C HR PL G + +Q
Sbjct: 34 WYPALRASSLKRKDTAVTTLLGIPMLLGRKSDGALFAMRDLCPHRGIPLSAGWFDGETVQ 93
Query: 271 CPYHGWEYS-TDGKCEKMPS----TQLRNVKI--KSLPCFEQEGMIWIW-----PGDEPP 318
C YHGW + G+C+++PS L KI S P E++G W++ G
Sbjct: 94 CKYHGWRFEPCSGQCQEIPSLTSHDSLEPTKIYANSFPVVERDGYAWVYVPEAGAGRVTE 153
Query: 319 TATIPCL--LPPSGFEIH-AEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAK-GWSV 372
AT+P + LP G A + ELP ++HG++ L+D AH PF H + + + S+
Sbjct: 154 EATLPPVPELPKFGSRFRSAHLQAELPCNVDHGII--GLMDPAHGPFVHRAWWWRSAASI 211
Query: 373 PSLVKFLTPASGLQ--GYWDPY------------PIDMEFRPPCMVLSTIGISKPGKLEG 418
K P L+ G+ + P + RP M+ + + +
Sbjct: 212 HEKTKKFEPIEDLEHDGFNAGFRMSPHAPSSNSAPYRLLGRPVTMIDFVLPNRRYETILA 271
Query: 419 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 478
+N R L P + R+ + D A HVPF+ + R+F + + +D
Sbjct: 272 ENARGKKRWFSSLTTVTPVTASTCRIDVIAAWDIA---YHVPFVTPIARYFGAKFVQQDQ 328
Query: 479 RLVLGQQE--RMNNG 491
+ ++ Q R N G
Sbjct: 329 QTMIEQARGLRSNPG 343
>gi|108757036|ref|YP_634611.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
xanthus DK 1622]
gi|108460916|gb|ABF86101.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus
xanthus DK 1622]
Length = 349
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 6/153 (3%)
Query: 235 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVN-EGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
+ +FR G P + + C HR PL G+V +GR+QCPYHGW + +G+ +LR
Sbjct: 34 YALFRDGTGQPAALADACPHRFAPLSKGTVRADGRLQCPYHGWRFDAEGRGSNPSQPELR 93
Query: 294 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 353
+ +S E+ G +W+ D P +A +P + G+ + LDN
Sbjct: 94 HCDARSFQVVERYGYLWLAERDTPLSA-MPD-MGDEGYVFGGAFSTHFAAPLHVSLDNFS 151
Query: 354 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQ 386
+ H P+ HT GW P+ + A L+
Sbjct: 152 EDEHTPYVHTRL---GWDDPNAGRVEFEARNLE 181
>gi|410942929|ref|ZP_11374670.1| vanillate O-demethylase oxygenase subunit [Gluconobacter frateurii
NBRC 101659]
Length = 351
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L W+PVA S DL D M P V++R DG + C HR PL +G+ N
Sbjct: 29 LARSWYPVALSRDLGDSPMGVTLLDAPLVVYRA-DGDIVIADDLCPHRGVPLSMGNGNGK 87
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIW--IWPGDEPPTAT 321
I C YHG+ + DG+C ++P+ + +++ P E+ G+IW + P E
Sbjct: 88 TIACAYHGFRFGQDGRCVRVPAHPDSKIPPKLHLRTYPVVERFGLIWTCLRPTGETNLPP 147
Query: 322 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
+P P+ +I + ++ G ++ +D+AH F HT TFA
Sbjct: 148 MPHWDDPTFQQITCPWI-DIKGFAGRQVEGFIDVAHFAFVHTETFA 192
>gi|316932512|ref|YP_004107494.1| Rieske (2Fe-2S) iron-sulfur domain [Rhodopseudomonas palustris
DX-1]
gi|315600226|gb|ADU42761.1| Rieske (2Fe-2S) iron-sulfur domain [Rhodopseudomonas palustris
DX-1]
Length = 452
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTCAHRA 256
GP P ++ +W P A +L+ + E V+F+ ++G G + C HR
Sbjct: 14 GPGTPCGKLMRAYWQPAALVDELEGERPIKPVRLLGEDLVLFKDENGRYGLIDRDCPHRG 73
Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWI 311
L G + G ++C +HGW + DG C P+ + +N+K ++ P + G++W
Sbjct: 74 ADLAFGRLENGGLRCAFHGWLFDVDGNCTDTPAEPVGSPLCKNIKQRAFPVVAKGGILWA 133
Query: 312 WPG-DEPPT-ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 362
+ G EPP I C + P + +ME L + +D AHA F H
Sbjct: 134 YLGAGEPPAFPEIDCFVAPDSHVFAFKGLMECNWLQALEVG--IDPAHASFLH 184
>gi|428310783|ref|YP_007121760.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428252395|gb|AFZ18354.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 340
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 213 RLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
+ ++FW+ +A S L + + E IFR ++G +++ C HR L G V
Sbjct: 2 KFEDFWYIIALSKQLPPNKILQRTLLGEWLAIFRDENGKAVALRDRCMHRNSRLSCGKVR 61
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTA 320
+G+IQCPYHGW Y GK +PS L ++KS EQ+G I++ D
Sbjct: 62 QGKIQCPYHGWIYDNTGKIMAVPSEGKDFQPLSTRQVKSYQTKEQDGYIYVQLSDNKSEE 121
Query: 321 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 366
P +P G+E ++ +N +D+ H F H F
Sbjct: 122 FAPFAMPYYQEPGWET-VRVINRFRNNVTNCAENFIDIPHTAFVHPGVF 169
>gi|334118342|ref|ZP_08492432.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Microcoleus
vaginatus FGP-2]
gi|333460327|gb|EGK88937.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Microcoleus
vaginatus FGP-2]
Length = 356
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 218 WFPVAFSTDLKDDTMEP--W----VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
W+ +A ++++ + W V+FR G +++ C HR L G V I+C
Sbjct: 28 WYAIARTSEVHTQPLAAKIWNRAIVLFRDSAGKINALEDRCPHRQVKLSHGQVKGDLIEC 87
Query: 272 PYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
YHGW + G+C ++ + +L N KI+S P EQ G IW++PGDE L
Sbjct: 88 AYHGWRLNARGECAEVDYLAENQKLPNCKIRSYPVKEQNGFIWLFPGDEMQAEKNNLLDL 147
Query: 328 PSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 375
P I V++ + L++NL+D+ H H + W+ P L
Sbjct: 148 PEWEHLNYIATVSVIDCQAHYSFLIENLMDMYHG---HLHDDWQAWANPVL 195
>gi|288961232|ref|YP_003451571.1| vanillate monooxygenase [Azospirillum sp. B510]
gi|288913540|dbj|BAI75027.1| vanillate monooxygenase [Azospirillum sp. B510]
Length = 384
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 125/308 (40%), Gaps = 38/308 (12%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ A+ +L+ + + + V++R D +++ C HR PL G + +
Sbjct: 40 NAWYAAAYDVELRRELLPRTICGKKLVLYRRSDDSVTALEDACWHRLLPLSKGRLEGDNL 99
Query: 270 QCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
C YHG ++ +G+C MPS + N ++ P E+ W+W GD P P +P
Sbjct: 100 VCGYHGLVFNPEGRCVGMPSQETINPSACVRRYPVVERHRFAWVWMGD--PALADPAKIP 157
Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------WSVPSLV 376
+ ++ + ++ L+LDNL+DL H F H+S+ +
Sbjct: 158 DMHWNHDPAWAGDGRLIRVKCDYRLVLDNLMDLTHETFVHSSSIGNRAVAEAPFETTHND 217
Query: 377 KFLTPASGLQG-----YW-----DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTR 422
+F+T ++ +W P +D + F PC + +G++ G + R
Sbjct: 218 RFVTVTRWMRDIEAPPFWAKQLGKPGNVDRWQIIRFEAPCTITIDVGVAPTGTGAPEGDR 277
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 482
+ L+ P + K + ++ L L R ++ ED ++
Sbjct: 278 SQGVNGFVLNTITPETEKTCHYFWAFCRNYK--LGEQRLTAEL-RDGVTRIFGEDEIILE 334
Query: 483 GQQERMNN 490
QQ+ +++
Sbjct: 335 AQQQAIDD 342
>gi|239820953|ref|YP_002948138.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
gi|239805806|gb|ACS22872.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 341
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 133/332 (40%), Gaps = 46/332 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
++N W+ +A+ ++ DD + EP +++R + G +Q+ C HR PL G
Sbjct: 3 VRNCWYVIAWDHEISDDALFTRTVLDEPILVYRTEGGELVAMQDRCCHRHAPLSRGRREG 62
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++C YHG +++ DG C + P VK +++ P I++W GD P+
Sbjct: 63 DCVRCGYHGLKFAADGVCVEAPGLASIPVKARVRTYPVVSHNKWIFVWMGD--PSLADRA 120
Query: 325 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTF----AKGWSVPSL 375
LLP + H + + + L+ DNLLD +H + H T A +VP +
Sbjct: 121 LLPDNFSCDHPDWRYRPGYVHYDTPYLLVCDNLLDFSHLSYVHEGTLGGSTAIAQAVPRI 180
Query: 376 VK------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE 417
K F + D Y I +F P +L G + G+ E
Sbjct: 181 EKVPRGIRVTRHVPDVPPSPFWKSFQSFESNVDRYFI-YDFLLPGTLLMKSGGAPVGQAE 239
Query: 418 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNED 477
+ ++ LH P + T ++ S S + + ++R ED
Sbjct: 240 --DEQRGGVQLHSCQALTPETATTTHYFFQQS--HRSSIADPAVTETIYRGLV-TAFEED 294
Query: 478 LRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
++ Q ++ A + LP+ D V+YR
Sbjct: 295 REMITAQYLNIDPEARM--LPLAMDAALVQYR 324
>gi|407961823|dbj|BAM55063.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
Length = 345
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 135/322 (41%), Gaps = 43/322 (13%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ VA + +L + + I+R +DG V++ C HR L G V +
Sbjct: 10 NHWYVVAQAGELGQGPLGIVLWEKAIAIYRDQDGQVRAVEDRCPHRQVKLSEGKVLGNNL 69
Query: 270 QCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI--- 322
+C YHGW++ G C K+P +L ++++ P E++G IW++PGD A+
Sbjct: 70 ECAYHGWQFDAQGHCAKIPYFSEDQKLPPCRLRTYPVQEKDGFIWLYPGDLDHLASHGPE 129
Query: 323 PCLLPPSGF--EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 380
P +P I + + P L++NL+D+ H H + W+ SL + T
Sbjct: 130 PLAIPEWHHLNHIGSFAAFDCPGHFSYLIENLMDMYHG---HLHDNYQAWASASLREIET 186
Query: 381 PASGL------QGYWDPYPIDMEFRPPCMVLSTIGISKPGKL-------EGQNTRQCATH 427
+ Q Y Y ID + + T+ P L +T
Sbjct: 187 NGDQVVVDYNAQSY---YKIDKIWSISQLFFPTLRRLHPENLRVSYIYPHWSSTLGADFK 243
Query: 428 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVP--FMQYL--W-----RHFAEQVLNEDL 478
++ L + +++ K L++ SL+ L +P F +L W R E ++++D+
Sbjct: 244 IYCLFCPISANKTKAYLVHFTSLEAFPKLHKLPVAFRSFLKNWLSGTARPLLEGLIDQDI 303
Query: 479 RLVLGQQERMNNGANVWNLPVG 500
R++ +Q + N+ V
Sbjct: 304 RMISQEQAAFEQNPDRQNVEVN 325
>gi|254559235|ref|YP_003066330.1| rieske 2Fe-2S family protein [Methylobacterium extorquens DM4]
gi|254266513|emb|CAX22277.1| putative rieske 2Fe-2S family protein [Methylobacterium extorquens
DM4]
Length = 361
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 140/346 (40%), Gaps = 48/346 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L N W+ ++ + M E V+ R KDG +++ C HR L G +
Sbjct: 24 LSNAWYCAGRASAVAGGKMRAVALNGEQVVLGRAKDGSLFALRDRCPHRGMALSKGKFDG 83
Query: 267 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 320
+ CP+HGW + TDG+C +P+ + + ++ P E G +W+ P P
Sbjct: 84 DTLMCPFHGWRFGTDGRCRDVPTLSAHDASDFSRIAVQRFPIVESAGFLWVNPHLGPSDP 143
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD--NLLDLAHAPFTH-TSTFAKGWSVPSLVK 377
+P FE +V+EL +E L +L+D H F H T F + VK
Sbjct: 144 GAVPAVPSLDFEPAGCLVLELEVEASFDLTTLSLVDPGHVAFVHDTWWFRPSKELREKVK 203
Query: 378 FLTP--------------ASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQNTR 422
P +S + P +++EFR P + L I K G T+
Sbjct: 204 TFQPVPHGFVMTSHATTTSSPVYRLLGGAPEVEIEFRLPGVRLERI---KAG------TK 254
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 482
+ A + + P+ T LY S+ ++LK P + L R F L +D +++
Sbjct: 255 RVANYTFATPMG-PNRTMLTNALY-WSMPALNLLK--PIARPLMRQF----LTQDQQVLQ 306
Query: 483 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 528
Q ++ + L G +RL R+ALE + PF P+
Sbjct: 307 HAQAGLDRKPTMVLLGQGDLPSQWYFRLKREALEAARESRPFANPL 352
>gi|389693322|ref|ZP_10181416.1| ring-hydroxylating dioxygenase, large terminal subunit [Microvirga
sp. WSM3557]
gi|388586708|gb|EIM27001.1| ring-hydroxylating dioxygenase, large terminal subunit [Microvirga
sp. WSM3557]
Length = 358
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 196 LPRKSLNVSGPVQPYNTR--------LKNFWFPVAFSTDLKDDTME------PWVIFRGK 241
LP K+ N P N L ++W PVA+ST++ D + P V++R
Sbjct: 3 LPAKNSNTPKSRLPRNCSFVPADWHILASYWHPVAWSTNVTDHPVGARLLDIPLVLWRSH 62
Query: 242 DGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR-----NVK 296
G ++ C HR L +G++ +G + CP HG+ Y G C K+P+ ++
Sbjct: 63 -GHVHAAKDLCMHRGAQLSMGAIRDGLLVCPLHGFHYDGSGACRKIPALSADAPIPVKLR 121
Query: 297 IKSLPCFEQEGMIWIWPGDEPPTATIPCL-LPPSGFEIHAEIVMELPIEHGLLLDNLLDL 355
++S C E+ GMIW+ DE P A IP SG A + ++N DL
Sbjct: 122 LESYLCEERYGMIWVC-LDEQPAAPIPEWPHIESGSGNLARVRGTWRASAARHVENFNDL 180
Query: 356 AHAPFTHTSTFA 367
H PF H TF
Sbjct: 181 CHIPFVHQGTFG 192
>gi|291445392|ref|ZP_06584782.1| vanillate O-demethylase oxygenase subunit [Streptomyces roseosporus
NRRL 15998]
gi|291348339|gb|EFE75243.1| vanillate O-demethylase oxygenase subunit [Streptomyces roseosporus
NRRL 15998]
Length = 374
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+FW+PVA S ++ + + E ++R K G +++ CAHR PL +G V+
Sbjct: 46 DFWYPVALSRSVRKEGVAAAVFAGERIALYRAKSGAVHALEDRCAHRQVPLSMGVVDGET 105
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEP-----PT 319
++C YH W Y DG+ ++P + + +++ P E G+++++PGD P
Sbjct: 106 LRCCYHAWAYRGDGRISQIPYLAKGDARPPRGVRAYPVREAYGLVFVFPGDPEKAEVTPL 165
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
+P P + + + L +NLLD+ H F H K
Sbjct: 166 PDVPAYASPRYRTM--TFSRTVRCHYSFLHENLLDMNHQ-FLHRGVVGK 211
>gi|407697725|ref|YP_006822513.1| phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein
[Alcanivorax dieselolei B5]
gi|407255063|gb|AFT72170.1| Phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein
[Alcanivorax dieselolei B5]
Length = 348
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L+ FW+PV L D E V++ +G P ++ CAHR L LG V
Sbjct: 9 LRRFWYPVMPLEQLGDGPQPFRLMNEELVLWLDSEGKPHAAEDRCAHRTARLSLGWVEGD 68
Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQLRN---VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
I CPYHGW Y G C ++P T R+ K+++ + G +W+ GD P IP
Sbjct: 69 NIVCPYHGWTYDGGGGCVRIPQTPDRSAGRAKVRAFNAEARYGYVWVCLGD--PLTDIPH 126
Query: 325 LLPPSGFEIHAEIV---MELPIEHGL-LLDNLLDLAHAPFTHTSTFAK 368
+ P E ++ E+ GL L++N D AH F H +F +
Sbjct: 127 M--PEADEPGYRVIHQFYEVWRTAGLRLMENSFDNAHFSFVHRESFGQ 172
>gi|51243146|gb|AAT99362.1| unknown [Sphingomonas sp. tfd44]
Length = 425
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQNTCAH 254
+G P L+ FW PV S L + P + FR DG+ G + C H
Sbjct: 13 TGRGTPMGEALRRFWIPVLLSEQLSEPDGPPRRLEIMGETFAAFRNTDGVVGILDEQCCH 72
Query: 255 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIW 310
R L LG V I+C +HGW+++ DG + P+ + KS P E+ GMIW
Sbjct: 73 RGASLVLGRVEGCGIRCLFHGWKFAVDGTIMETPNVLDPRFKEKFRAKSYPVREEGGMIW 132
Query: 311 IWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
++ G EPP P P+ + V++ L + L+D +H H FA
Sbjct: 133 MYMGPAELEPPFPHWPYFDVPAENRLAVAFVVD-ECNFVQLGEALVDSSHLTILHKDIFA 191
Query: 368 K 368
+
Sbjct: 192 R 192
>gi|389704931|ref|ZP_10186022.1| vanillate O-demethylase oxygenase [Acinetobacter sp. HA]
gi|388611032|gb|EIM40142.1| vanillate O-demethylase oxygenase [Acinetobacter sp. HA]
Length = 351
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 132/308 (42%), Gaps = 56/308 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
L + W+PVA D+ + + I++ + G+ V++ C HR PL G V+ G
Sbjct: 26 LAHHWYPVARIQDVNEKPQQVTLLDVKLAIYKTESGVIHLVRDICPHRGVPLSKGWVSGG 85
Query: 268 RIQCPYHGWEYSTDGKCEKMPS----TQLRN-VKIKSLPCFEQEGMIW--IWPGDEPPTA 320
I CPYHG +Y+ GKC K+P+ T++ + + P E+ G+IW ++ +E A
Sbjct: 86 NIVCPYHGLQYNEQGKCIKIPAQPELTKISDRFSLTKFPVVEKYGLIWTSLFSRNE-SAA 144
Query: 321 TIPCLLPPSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 377
P L E H I+ +++ G L+ +D+AH + H + FA P + K
Sbjct: 145 NFPVLDTWDTAE-HQSILPPFVDIAGSSGRQLEGFIDVAHFAWVHHNAFADR-DNPVVPK 202
Query: 378 FLT--PASGLQGYW----DPYPIDME--------------FRPPCMVLSTIGISKPGKLE 417
+ T + GL + YP M+ PP + T+ G L+
Sbjct: 203 YNTERTSYGLHTEYVSNVSNYPHGMQHLAPEGFLWKRVFDVYPPFSAILTVHFPNEGILK 262
Query: 418 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNED 477
L+ C P S +TRL ++ +F + +Q ++ F Q+ ED
Sbjct: 263 ------------ILNACCPVSHNQTRLFVPLTRNFDTTGD----LQAVYD-FNAQIFAED 305
Query: 478 LRLVLGQQ 485
LV Q+
Sbjct: 306 QELVESQK 313
>gi|229079696|ref|ZP_04212229.1| hypothetical protein bcere0023_23490 [Bacillus cereus Rock4-2]
gi|228703536|gb|EEL55989.1| hypothetical protein bcere0023_23490 [Bacillus cereus Rock4-2]
Length = 322
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 126/290 (43%), Gaps = 45/290 (15%)
Query: 218 WFPVAFSTDLKDDTMEP------WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 271
W+ V+++ D+K ++ +V++R + + C HR L LG V G++ C
Sbjct: 13 WYAVSYAKDIKKIPVKKRVAGKDFVLYRDEKDEVQALSPYCPHRGADLSLGQVVNGKLVC 72
Query: 272 PYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDE--PPTATIPCL 325
PYHGWE+ + G C ++PS + + S P E+ G+IWI+P +E PP +
Sbjct: 73 PYHGWEFDSCGTCVRIPSQPNKPIPKFAHTLSYPVKEKIGLIWIYPDNEETPPEWQTFHV 132
Query: 326 LPPSGFEI---HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ + F++ HA L ++++LD+AH + H T + K +
Sbjct: 133 MENTPFKLSFFHATWNAHLTRS----IESVLDIAHLAYVHKKTIGRK------TKAESTN 182
Query: 383 SGLQGYWDPYPID-----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPS 437
L+G D + +E++ P + GK E ++ Q T P
Sbjct: 183 YKLEGTLDQFIFSNGDAYLEYKFPHQ-----WMLHSGKQENESFIQYIT-------FTPI 230
Query: 438 SRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQER 487
++T + M + LK+ P + + F+ +VL ED +V Q R
Sbjct: 231 DEEETLI---MGYTGRTFLKYFPLLDQILAKFSLRVLKEDQIIVESQHPR 277
>gi|16330819|ref|NP_441547.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|383322561|ref|YP_005383414.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325730|ref|YP_005386583.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491614|ref|YP_005409290.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436881|ref|YP_005651605.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|451814977|ref|YP_007451429.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|1653312|dbj|BAA18227.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|339273913|dbj|BAK50400.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|359271880|dbj|BAL29399.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275050|dbj|BAL32568.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278220|dbj|BAL35737.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451780946|gb|AGF51915.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
Length = 357
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 135/322 (41%), Gaps = 43/322 (13%)
Query: 216 NFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ VA + +L + + I+R +DG V++ C HR L G V +
Sbjct: 22 NHWYVVAQAGELGQGPLGIVLWEKAIAIYRDQDGQVRAVEDRCPHRQVKLSEGKVLGNNL 81
Query: 270 QCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI--- 322
+C YHGW++ G C K+P +L ++++ P E++G IW++PGD A+
Sbjct: 82 ECAYHGWQFDAQGHCAKIPYFSEDQKLPPCRLRTYPVQEKDGFIWLYPGDLDHLASHGPE 141
Query: 323 PCLLPPSGF--EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 380
P +P I + + P L++NL+D+ H H + W+ SL + T
Sbjct: 142 PLAIPEWHHLNHIGSFAAFDCPGHFSYLIENLMDMYHG---HLHDNYQAWASASLREIET 198
Query: 381 PASGL------QGYWDPYPIDMEFRPPCMVLSTIGISKPGKL-------EGQNTRQCATH 427
+ Q Y Y ID + + T+ P L +T
Sbjct: 199 NGDQVVVDYNAQSY---YKIDKIWSISQLFFPTLRRLHPENLRVSYIYPHWSSTLGADFK 255
Query: 428 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVP--FMQYL--W-----RHFAEQVLNEDL 478
++ L + +++ K L++ SL+ L +P F +L W R E ++++D+
Sbjct: 256 IYCLFCPISANKTKAYLVHFTSLEAFPKLHKLPVAFRSFLKNWLSGTARPLLEGLIDQDI 315
Query: 479 RLVLGQQERMNNGANVWNLPVG 500
R++ +Q + N+ V
Sbjct: 316 RMISQEQAAFEQNPDRQNVEVN 337
>gi|442324040|ref|YP_007364061.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
gi|441491682|gb|AGC48377.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
Length = 351
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 235 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVN-EGRIQCPYHGWEYSTDGKCEKMPSTQLR 293
+V+FR G P + + C HR PL G V +GR+QCPYHGW + ++G+ LR
Sbjct: 34 YVLFRDARGRPAALADQCPHRFAPLSKGRVGADGRLQCPYHGWRFDSEGRGFNPSQPDLR 93
Query: 294 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI--VMELPIEHGLLLDN 351
+ ++S E +W+ E P + +P L G+ + E P+ + +DN
Sbjct: 94 HCDVRSFQVVEHRDYLWL-AHRETPLSALPELPLSDGYVFGGSFSTLFEAPLH--VAIDN 150
Query: 352 LLDLAHAPFTHTSTFAKGWSVP 373
+ H P+ HT GW P
Sbjct: 151 FSEDEHTPYVHTRL---GWDDP 169
>gi|117168631|gb|ABK32295.1| JerL [Sorangium cellulosum]
Length = 356
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 8/140 (5%)
Query: 235 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVN-EGRIQCPYHGWEYSTDGK--CEKMPSTQ 291
+ +FR + G P + + C HR PL G V +GR++CPYHGW + +G+ C PS
Sbjct: 42 YALFRDEQGRPAALADACPHRLAPLSQGRVRPDGRLECPYHGWHFDAEGRGACPSQPS-- 99
Query: 292 LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 351
L +S EQ G +W+ D P +A GFE P ++ DN
Sbjct: 100 LTRCDTRSFQLVEQLGYLWLAHRDTPRSALPELDFSSDGFEYAGTFSHLAPAPLHVIFDN 159
Query: 352 LLDLAHAPFTHTSTFAKGWS 371
+ H PF H GW+
Sbjct: 160 SSEDEHTPFVHGRL---GWT 176
>gi|197295557|ref|YP_002154098.1| putative oxidoredutase [Burkholderia cenocepacia J2315]
gi|444360500|ref|ZP_21161724.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
gi|444366598|ref|ZP_21166625.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|195945036|emb|CAR57661.1| putative oxidoredutase [Burkholderia cenocepacia J2315]
gi|443599939|gb|ELT68178.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
gi|443604315|gb|ELT72259.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 371
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+ W+P+A+S +LK +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRTESGAVYALEDRCAHRQVPLHAGVVSGET 91
Query: 269 IQCPYHGWEYSTD-GKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
++C YHGW Y+ D G+C +P + +++ PC E G+I+++PGD AT+
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRERLPNGVRAYPCREAHGLIFVFPGD----ATLAEA 147
Query: 326 LPPSGFEIHAEIVM-------ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P E + E+ + + +NL+D+ H F H +
Sbjct: 148 RPFPALESADDRAFKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|239988406|ref|ZP_04709070.1| putative oxygenase Rieske iron-sulfur component [Streptomyces
roseosporus NRRL 11379]
Length = 363
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+FW+PVA S ++ + + E ++R K G +++ CAHR PL +G V+
Sbjct: 35 DFWYPVALSRSVRKEGVAAAVFAGERIALYRAKSGAVHALEDRCAHRQVPLSMGVVDGET 94
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDE-----PPT 319
++C YH W Y DG+ ++P + + +++ P E G+++++PGD P
Sbjct: 95 LRCCYHAWAYRGDGRISQIPYLAKGDARPPRGVRAYPVREAYGLVFVFPGDPEKAEVTPL 154
Query: 320 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
+P P + + + L +NLLD+ H F H K
Sbjct: 155 PDVPAYASPRYRTM--TFSRTVRCHYSFLHENLLDMNHQ-FLHRGVVGK 200
>gi|148554469|ref|YP_001262051.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148499659|gb|ABQ67913.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 353
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 216 NFWFPVAFSTDLKDDTMEPW------VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 269
N W+ AF+ ++ + W V++R + G +++ C HR PL +G + I
Sbjct: 20 NCWWVAAFADEVGRVPLGRWLLDTPVVLYRTQGGEVVALEDRCPHRQAPLSIGKLQGDAI 79
Query: 270 QCPYHGWEYSTDGKCEKMPS-TQLRNVKIKSLPCFEQEGMIWIWPGDE------PPTATI 322
+C YHG+++ DG+C ++P+ + I++ P E ++W++ GD PP T+
Sbjct: 80 ECGYHGFQFGRDGRCVRVPTMASPPPISIETFPVREIGPLVWVYLGDSACLDAVPPPPTM 139
Query: 323 PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 382
+ PS F I + E+ + LL +N+LDL H + H +F V L T
Sbjct: 140 AWMSDPS-FAIR-QGKTEIAANYLLLKENVLDLTHFGYVHAGSFGITNVVGKLTVTRTDD 197
Query: 383 S-GLQGYWDPYPI 394
+ G + +DP P+
Sbjct: 198 TVGYEEIFDPAPL 210
>gi|434389375|ref|YP_007099986.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428020365|gb|AFY96459.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 363
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 123/305 (40%), Gaps = 48/305 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
L+N W+ + +K M EP V R + G +++ C HRA PL G +
Sbjct: 22 LRNIWYYALPAERIKAGQMLAKQLLGEPVVFGRTQAGEVFALRDICPHRAVPLSCGRFDG 81
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQ------LRNVKIKSLPCFEQEGMIWIWPGD----- 315
I+C YHGW + G C +P+ L +++ P E +G IWI+ D
Sbjct: 82 KEIECAYHGWRFDDGGTCTAIPALNDDRDLDLSKFQVRRYPVREVQGNIWIYMSDLDRCD 141
Query: 316 -EPPTATIPCLLPPSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 372
P T+P + G + M+ P I+H ++ L+D +H PF H + + W
Sbjct: 142 EREPQQTVPEIAGFEGVTHQSTFTMKFPCFIDHAVV--GLMDPSHVPFVHRAWW---WRS 196
Query: 373 PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG---------KLEGQNTRQ 423
+++ A +DP P R + T G +L G Q
Sbjct: 197 DTILTDEIKA------FDPSPYGFTMRRHRLERQTFFYRLLGGDAEVEIAFRLPGVRIEQ 250
Query: 424 CATHLHQ---LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 480
T+ ++ L V P S +T + + F + + +++L + F L +D +
Sbjct: 251 IVTNTNRVCNLTVITPISETETEV----TTMFYTTIPWFKPLRWLIQPFITTFLGQDRDM 306
Query: 481 VLGQQ 485
V+ QQ
Sbjct: 307 VVKQQ 311
>gi|60326839|gb|AAX18934.1| isophthalate dioxygenase oxygenase component [Comamonas
testosteroni]
Length = 424
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM---------EPWVIFRGKDGIPGCVQ 249
++L GP L+ +W P S+++ + E + FR DG +
Sbjct: 7 ETLTRVGPNTRMGNLLRRYWVPALMSSEIAEADGPQVRVQLLGEKLLAFRNTDGKACLIS 66
Query: 250 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST--QLRNVKIKSLPCFEQEG 307
C+HR L+ G E I+C YHG ++ DG+C +PS+ + IK PC E+ G
Sbjct: 67 EFCSHRGVSLYFGRNEENGIRCAYHGVKFDGDGQCVDVPSSPQSCARMHIKGYPCVERGG 126
Query: 308 MIWIWPGDEPPTATIP----CLLPPSGFEIHAEIVMELPIEHGL-LLDNLLDLAHAPFTH 362
++W + G E + P C LPP H + L + L ++ +D AH + H
Sbjct: 127 IVWTYMGPEEHKPSPPELEWCTLPPE----HVFVSKRLQYSNWLQAMEGGIDTAHVSYVH 182
>gi|423107692|ref|ZP_17095387.1| hypothetical protein HMPREF9687_00938 [Klebsiella oxytoca 10-5243]
gi|376386425|gb|EHS99136.1| hypothetical protein HMPREF9687_00938 [Klebsiella oxytoca 10-5243]
Length = 345
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 124/308 (40%), Gaps = 49/308 (15%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA + D+ + E VI+R K + ++ C HR PL LG +E
Sbjct: 21 RLAKCWHPVARACDIGPAPVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHDE 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEPP 318
I CPYHG + DG+C ++PS+ + V K S E+ G+IW P D P
Sbjct: 80 EGIVCPYHGLRFGEDGRCNRIPSSPDQPVPAKLNLTSFAVEERYGLIWTCLAFDPQDPMP 139
Query: 319 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 376
+P GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 140 LPVMPHWH-DDGFQQINCPAFEVNGFAGRQVEGFLDVAHFAWIHTGTFADPNNQVVPDYN 198
Query: 377 KFLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNT 421
T + YW YP EFR P +T+ I PG
Sbjct: 199 PQETAFGFIADYWSSVGNYPASTEFRAPEGFQWLRHFEMHLPFTATLTIHFPGD------ 252
Query: 422 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 481
L ++ P S + TR+ ++ +F HVP F +V ED +V
Sbjct: 253 ----ARLVIMNAASPVSSRITRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRMMV 303
Query: 482 LGQQ-ERM 488
Q+ ER+
Sbjct: 304 ETQRPERL 311
>gi|398826214|ref|ZP_10584473.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
YR681]
gi|398221647|gb|EJN08051.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
YR681]
Length = 452
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 25/181 (13%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDT--------MEPWVIFRGKDGIPGCVQNTC 252
+ +GP P ++++W P A +L+ + E V+FR + G G + C
Sbjct: 10 ITRTGPKDPCGKLMRSYWQPAALVDELEGERPIRPVKLLGENLVLFRDETGRYGLIDRHC 69
Query: 253 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 307
AHR L G + G ++C +HGW + G+C + P S +N++ +S P E+ G
Sbjct: 70 AHRGADLAFGRLEHGGLRCAFHGWLFDATGQCIETPAEPKESKLCQNIRQRSYPVVEKSG 129
Query: 308 MIWIWPGD-EPPT-ATIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 361
++W + G+ EPP + C + P F+ H +E G +D AHA +
Sbjct: 130 ILWAYLGEGEPPAFPELDCFVAPGTHTFAFKGHMACNWLQALEVG------IDPAHASYL 183
Query: 362 H 362
H
Sbjct: 184 H 184
>gi|375260136|ref|YP_005019306.1| vanillate O-demethylase oxygenase subunit [Klebsiella oxytoca KCTC
1686]
gi|397657213|ref|YP_006497915.1| Vanillate O-demethylase oxygenase subunit [Klebsiella oxytoca E718]
gi|365909614|gb|AEX05067.1| vanillate O-demethylase oxygenase subunit [Klebsiella oxytoca KCTC
1686]
gi|394345693|gb|AFN31814.1| Vanillate O-demethylase oxygenase subunit [Klebsiella oxytoca E718]
Length = 345
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 126/307 (41%), Gaps = 47/307 (15%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA + D+ + E VI+R K + ++ C HR PL LG +E
Sbjct: 21 RLAKCWHPVARACDIGPAPVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHDE 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIWPGDEPPTATI 322
I CPYHG + DG+C ++PS+ + V K S E+ G+IW +P
Sbjct: 80 EGIVCPYHGLRFGEDGRCNRIPSSPDQPVPAKLNLTSFAVEERYGLIWTCLAFDPENPMP 139
Query: 323 PCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLVK 377
++P GF+ E+ G ++ LD+AH + HT TFA VP+
Sbjct: 140 LPVMPHWHDDGFQQINCPAFEVNGFAGRQVEGFLDVAHFAWIHTDTFADPDNQVVPNYNP 199
Query: 378 FLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNTR 422
T + YW YP EFR P +T+ I PG+
Sbjct: 200 QETSFGFIADYWSSVGNYPASSEFRAPEGFQWLRHFEMHLPFTATLTIHFPGE------- 252
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 482
L ++ P S + TR+ ++ +F HVP F +V ED +V
Sbjct: 253 ---ARLVIMNAASPVSSRITRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMVE 304
Query: 483 GQQ-ERM 488
Q+ ER+
Sbjct: 305 TQRPERL 311
>gi|383318205|ref|YP_005379047.1| ring-hydroxylating dioxygenase, large terminal subunit [Frateuria
aurantia DSM 6220]
gi|379045309|gb|AFC87365.1| ring-hydroxylating dioxygenase, large terminal subunit [Frateuria
aurantia DSM 6220]
Length = 345
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 30/177 (16%)
Query: 212 TRLKNFWFPVAFSTDLKDDTME------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
T L W+PVA + L + + P V++R + G+ ++ C+HR PL G V
Sbjct: 22 TILSQHWYPVAIAETLGEQPLAVTLLDYPLVLWRAQ-GLIHAARDLCSHRGVPLSKGWVE 80
Query: 266 EGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 321
+G I CPYHG Y+ DG+C K+P+ T ++ P E+ G+IW P
Sbjct: 81 DGLIVCPYHGLRYAGDGRCRKIPAHPEITPSPRFQLPVFPVVERYGLIWTSLASTDPAGI 140
Query: 322 IPC----------LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
P +LPPS +IH G ++ +D+AH + H FA
Sbjct: 141 PPFEAWNQAEYRRILPPS-VDIHGSA--------GRQVEGFVDVAHFAWIHHEAFAS 188
>gi|159480512|ref|XP_001698326.1| pheophorbide A oxygenase [Chlamydomonas reinhardtii]
gi|158282066|gb|EDP07819.1| pheophorbide A oxygenase [Chlamydomonas reinhardtii]
Length = 365
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 32/294 (10%)
Query: 218 WFPVAFSTDLKDDTME-------PWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVN-EGR 268
W+PVAF+ DL P V++ K+ V ++ C HR PL G + G
Sbjct: 6 WYPVAFTKDLDPAKPHRVTLLGIPMVVWWDKNAAAWRVFEDVCPHRLVPLSEGRITPSGL 65
Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVKI-----KSLPCFEQEGMIWIWPGDEPPTAT-- 321
++C YHGW +S DGKCE +P C ++G++++ G
Sbjct: 66 LECGYHGWAFSGDGKCEVIPQVSQGKCDTPRACATGYHCAVRQGLLFVGAGSGGGAEEAR 125
Query: 322 IPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 378
IP L P G + ++ +LP + L++N+LD +H PFTH ++ + + P +K
Sbjct: 126 IPLVSELEEPGGKWLSQDVWRDLPYDWSTLMENVLDSSHVPFTHHASMSNR-NGPYDLKL 184
Query: 379 LTPAS--GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLP 436
+ + G G W P + P + + P L+ + + L ++ +P
Sbjct: 185 TSAITDAGFSGMWTTGPRAGKLGP-----QSTTFTAPCFLKHRLDSKGFASLTVVYA-VP 238
Query: 437 SSRKKTRLLYRMSLDFASVLKHVPF--MQYLWRHFAEQVLNED--LRLVLGQQE 486
+ RL+ R L F + + F + W H + VL ED + L LG++E
Sbjct: 239 MEPGRCRLINRNVLRFNNAIPEAIFGLVPSWWWHVSSHVLLEDDQIFLHLGEEE 292
>gi|134290944|ref|YP_001114713.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
vietnamiensis G4]
gi|134134133|gb|ABO58458.1| Rieske (2Fe-2S) domain protein [Burkholderia vietnamiensis G4]
Length = 373
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 18/168 (10%)
Query: 216 NFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+ W+P+A+S +LK +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRAESGAVYALEDRCAHRQVPLHAGVVDGET 91
Query: 269 IQCPYHGWEYSTD-GKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPG-----DEPPTA 320
++C YHGW Y+ D G+C +P + +++ PC E G+I+++PG DE P
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRERLPNGVRAYPCRETHGVIFVFPGDATLADERPVP 151
Query: 321 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 368
+ P+ ++ E+ + + +NL+D+ H F H +
Sbjct: 152 ALESADNPA-YKTR-RFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|421739886|ref|ZP_16178173.1| ring-hydroxylating dioxygenase, large terminal subunit
[Streptomyces sp. SM8]
gi|406691728|gb|EKC95462.1| ring-hydroxylating dioxygenase, large terminal subunit
[Streptomyces sp. SM8]
Length = 351
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 134/342 (39%), Gaps = 69/342 (20%)
Query: 210 YNTRLKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLG 262
+ T L+N W+PV S + + M EPW++FR G + + C HR+ PL LG
Sbjct: 19 HATGLRNQWYPVLPSHFVANGEMKRVVRLGEPWLLFRRPTGELHMIADRCPHRSAPLSLG 78
Query: 263 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPP 318
R+ C YHG + +G K+P N++ + SLP E+ G ++ W GDE
Sbjct: 79 QHLGDRVACLYHGVQVDGEGTVVKVPGLPGCNLEGKRLVTSLPVREEHGAVFAWFGDEAH 138
Query: 319 TATIPCLLPP-------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 371
P +LP +GF +AE +DN+LD H F H ++ +
Sbjct: 139 PEPAPLVLPERLTDPDTAGFLNYAEWGAPWR----FYIDNVLDPMHGAFLHGTSHSMAGG 194
Query: 372 VPSLVKFLTPASGLQGYW---------------------DPYPIDMEFRP---PCMVLST 407
S +F +G G++ D +++ ++P P
Sbjct: 195 AKS-ARFRIRETG-HGFFFEKTDQVGVNFDWVEFGRTGVDWVDLEIPYQPYAGPGGAFGI 252
Query: 408 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 467
+G+ P + A + R R LYRM+L+ R
Sbjct: 253 VGMVTP-----ITATESAIFHWRTRAVQGWERDSWRFLYRMTLEA--------------R 293
Query: 468 HFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 509
H +VL +D ++ E + G N++ +G ++ YR
Sbjct: 294 H--HEVLEQDRTMLEEMPENADTGENLYQHDLGVVRIRRMYR 333
>gi|421727698|ref|ZP_16166857.1| vanillate O-demethylase oxygenase subunit [Klebsiella oxytoca M5al]
gi|195973390|gb|ACG63333.1| (hypo)xanthine hydroxylase [Klebsiella oxytoca M5al]
gi|410371447|gb|EKP26169.1| vanillate O-demethylase oxygenase subunit [Klebsiella oxytoca M5al]
Length = 345
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 126/307 (41%), Gaps = 47/307 (15%)
Query: 213 RLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
RL W PVA + D+ + E VI+R K + ++ C HR PL LG +E
Sbjct: 21 RLAKCWHPVARACDIGPAPVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHDE 79
Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIWPGDEPPTATI 322
I CPYHG + DG+C ++PS+ + V K S E+ G+IW +P
Sbjct: 80 EGIVCPYHGLRFGEDGRCNRIPSSPDQPVPAKLNLTSFAVEERYGLIWTCLAFDPENPMP 139
Query: 323 PCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLVK 377
++P GF+ E+ G ++ LD+AH + HT TFA VP+
Sbjct: 140 LPVMPHWHDDGFQQINCPAFEVNGFAGRQVEGFLDVAHFAWIHTETFADPDNQVVPNYNP 199
Query: 378 FLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNTR 422
T + YW YP EFR P +T+ I PG+
Sbjct: 200 QETAFGFIADYWSSVGNYPASSEFRAPEGFQWLRHFEMHLPFTATLTIHFPGE------- 252
Query: 423 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 482
L ++ P S + TR+ ++ +F HVP F +V ED +V
Sbjct: 253 ---ARLVIMNAASPVSSRITRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMVE 304
Query: 483 GQQ-ERM 488
Q+ ER+
Sbjct: 305 TQRPERL 311
>gi|149917528|ref|ZP_01906025.1| iron-sulfur cluster-binding protein, Rieske family [Plesiocystis
pacifica SIR-1]
gi|149821591|gb|EDM80989.1| iron-sulfur cluster-binding protein, Rieske family [Plesiocystis
pacifica SIR-1]
Length = 379
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 234 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS---- 289
P V+FR + G G + + C HR PL GSV+ ++C YHGW + T+G+C ++PS
Sbjct: 64 PIVVFRNRAGEVGALLDRCPHRNVPLSDGSVDGALLRCGYHGWAFDTEGECREVPSLCGQ 123
Query: 290 TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL---LPPSGFEIHAEIVMELPIEHG 346
+ + ++ C EQ+G++W++ E P + + S F E H
Sbjct: 124 AEGKARTVQRFACREQDGLVWVYATPEVEPVREPYVFRWMRDSAFHSGMESFEVEGTVHA 183
Query: 347 LLLDNLLDLAHAPFTHTSTFAK 368
+ +N LD+ H F H F K
Sbjct: 184 -VAENALDVPHTAFLHKGLFRK 204
>gi|418528828|ref|ZP_13094770.1| Rieske iron-sulfur protein [Comamonas testosteroni ATCC 11996]
gi|371454089|gb|EHN67099.1| Rieske iron-sulfur protein [Comamonas testosteroni ATCC 11996]
Length = 324
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 23/170 (13%)
Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
+ W PVA S+D+ +P V++R +G+ + C HR L +G V G
Sbjct: 4 RTLWHPVAQSSDVVSAPFSVLLLEQPLVLWRNAEGLVQSFVDRCPHRGARLSMGRVENGH 63
Query: 269 IQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 324
++CPYHGW++S+ G+C K+P+ T + ++++ E G+IW+ EP + +P
Sbjct: 64 LECPYHGWQFSSGGQCVKVPAVPDFTPPASQRVQAFEVQEAYGLIWV--RLEPSDSQLPV 121
Query: 325 LLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHTSTFAKGW 370
+ + H V P + +++N LD++H F H +GW
Sbjct: 122 FAAET--DEHLRKVNCGPYDVAASAPRIIENFLDMSHFGFVH-----EGW 164
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,719,712,714
Number of Sequences: 23463169
Number of extensions: 376305274
Number of successful extensions: 778906
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2377
Number of HSP's successfully gapped in prelim test: 3371
Number of HSP's that attempted gapping in prelim test: 769792
Number of HSP's gapped (non-prelim): 6436
length of query: 528
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 381
effective length of database: 8,910,109,524
effective search space: 3394751728644
effective search space used: 3394751728644
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)