BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 009689
         (528 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9MBA1|CAO_ARATH Chlorophyllide a oxygenase, chloroplastic OS=Arabidopsis thaliana
           GN=CAO PE=1 SV=1
          Length = 536

 Score =  822 bits (2123), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/532 (75%), Positives = 460/532 (86%), Gaps = 9/532 (1%)

Query: 2   TAIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
            A+ + +ALSLPIS    R + ++ KK V+G FRVFA+FG+E GLV+KKS W  LFDVED
Sbjct: 3   AAVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVED 62

Query: 60  PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
           PRSK P  KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLNPLAR+YKS
Sbjct: 63  PRSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKS 122

Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
           IGT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL  R  +  D+  
Sbjct: 123 IGTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDKPS 182

Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------- 232
           +S + S   LD  K     KSLNVSGPV PY+  LKNFW+PVAF+ DLK DTM       
Sbjct: 183 SSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFE 242

Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
           +PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 243 QPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKL 302

Query: 293 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 352
             VKIKSLPC EQEGMIWIWPGDEPP   +P L PPSGF IHAE+VM+LP+EHGLLLDNL
Sbjct: 303 LKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNL 362

Query: 353 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 412
           LDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISK
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISK 422

Query: 413 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 472
           PGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSLDFA +LK++PFM++LWRHFAEQ
Sbjct: 423 PGKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQ 482

Query: 473 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
           VLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRLWR+A+++G  +LPF
Sbjct: 483 VLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534


>sp|Q8S7E1|CAO_ORYSJ Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp.
           japonica GN=CAO PE=2 SV=1
          Length = 541

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/534 (75%), Positives = 458/534 (85%), Gaps = 14/534 (2%)

Query: 4   IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
           + T A+LSL P  L +P+ +  ++K V   GG +V+A+ G++G    K +AW  LF V+D
Sbjct: 1   MTTVASLSLLPHLLIKPSFRCCSRKGVGRYGGIKVYAVLGDDGADYAKNNAWEALFHVDD 60

Query: 60  PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
           P  +VP  KGKFLDVNQALEV R+DIQYCDWRARQD+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61  PGPRVPIAKGKFLDVNQALEVVRFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLAREFKS 120

Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
           IGT++KELAELQE+LA+AH QVH+SE RV++ALDKLA ME LVNDRLLQD  +S +   C
Sbjct: 121 IGTLRKELAELQEELAKAHNQVHLSETRVSSALDKLAQMETLVNDRLLQDGGSSASTAEC 180

Query: 180 AS--PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP--- 234
            S  PSTS  S  +V  K PR+SLNVSGPVQPYN  LKNFW+PVAFS+DLKDDTM P   
Sbjct: 181 TSLAPSTSSAS-RVVNKKPPRRSLNVSGPVQPYNPSLKNFWYPVAFSSDLKDDTMVPIDC 239

Query: 235 ----WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 290
               WVIFRGKDG PGCV NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST
Sbjct: 240 FEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 299

Query: 291 QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLD 350
           ++ NV+I+SLPCFEQEGM+WIWPG++PP +TIP LLPPSGF IHAEIVMELP+EHGLLLD
Sbjct: 300 KMLNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSLLPPSGFTIHAEIVMELPVEHGLLLD 359

Query: 351 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 410
           NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEFRPPCMVLSTIGI
Sbjct: 360 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGI 419

Query: 411 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 470
           SKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRMSLDFA  +KHVPFM  LW HFA
Sbjct: 420 SKPGKLEGKSTKQCSTHLHQLHICLPSSRNKTRLLYRMSLDFAPWIKHVPFMHILWSHFA 479

Query: 471 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 524
           E+VLNEDLRLVLGQQERM NGANVWN PV YDKLG+RYRLWRDA+E+G  +LPF
Sbjct: 480 EKVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGIRYRLWRDAIERGVDRLPF 533


>sp|Q9ZWM5|CAO_CHLRE Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas
           reinhardtii GN=CAO PE=2 SV=2
          Length = 645

 Score =  410 bits (1054), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/488 (43%), Positives = 288/488 (59%), Gaps = 62/488 (12%)

Query: 89  DWRARQDVLTIMLLHE----KVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHIS 144
           ++  RQD    + + E    KV E L+  AR+  ++G ++ +L  L+  +AQA  ++ ++
Sbjct: 125 EYVTRQDAAATLAMIEEANRKVEESLSEEAREKTAVGDLRDQLESLRAQVAQAQERLAMT 184

Query: 145 EARVATALDKLAYM--EALVNDRLLQDRHTSGTDQTCASPST------------------ 184
           ++RV   L ++  +  EA   +R+ +       ++   + ST                  
Sbjct: 185 QSRVEQNLQRVNELKAEATTLERMRKASDLDIKERERIAISTVAAKGPASSSSSAAAVSA 244

Query: 185 ---------SKQSLDIVKGKLPRKSLNVSGPVQPYNTR------------------LKNF 217
                     + +   V  ++P  S        P  ++                  L+NF
Sbjct: 245 PATSATLTVERPAATTVTQEVPSTSYGTPVDRAPRRSKAAIRRSRGLESSMEIEEGLRNF 304

Query: 218 WFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
           W+P  FS  L  DT+       EPWV+FR + G P C+++ CAHR CPL LG V EG++ 
Sbjct: 305 WYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQPSCIRDECAHRGCPLSLGKVVEGQVM 364

Query: 271 CPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL-PP 328
           CPYHGWE++ DG C KMPST   RNV + +LPC E++G IW+WPGD  P  T+P    PP
Sbjct: 365 CPYHGWEFNGDGACTKMPSTPFCRNVGVAALPCAEKDGFIWVWPGDGLPAETLPDFAQPP 424

Query: 329 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY 388
            GF IHAEI++++P+EHGLL++NLLDLAHAPFTHTSTFA+GW VP  VKF      L G+
Sbjct: 425 EGFLIHAEIMVDVPVEHGLLIENLLDLAHAPFTHTSTFARGWPVPDFVKFHA-NKALSGF 483

Query: 389 WDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYR 447
           WDPYPIDM F+PPCM LSTIG+++PGK + G    QC  HLHQLHVC+PS +  TRLLYR
Sbjct: 484 WDPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKKGHTRLLYR 543

Query: 448 MSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVR 507
           MSLDF   ++HVPF+  +W+  A QVL EDL LVLGQQ+RM  G + W+ P  YDKL VR
Sbjct: 544 MSLDFLPWMRHVPFIDRIWKQVAAQVLGEDLVLVLGQQDRMLRGGSNWSNPAPYDKLAVR 603

Query: 508 YRLWRDAL 515
           YR WR+ +
Sbjct: 604 YRRWRNGV 611


>sp|Q9XJ38|CAO_DUNSA Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina
           GN=CAO PE=2 SV=1
          Length = 463

 Score =  364 bits (934), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 196/445 (44%), Positives = 264/445 (59%), Gaps = 51/445 (11%)

Query: 123 MKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEA----LVNDRL------------ 166
           M+ +L  LQ+++++A  ++  SEARVA  L ++  ++A    L   RL            
Sbjct: 1   MQSKLLGLQDEISEARDKLRTSEARVAQNLKRVDELKAEAASLERMRLASSSSTDSTVSI 60

Query: 167 ----------------------LQDR-HTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNV 203
                                 +Q R   SG   T       + S  + +G  P+ S  +
Sbjct: 61  ASRGGAAVAATTSVPDHVEREGIQSRVRGSGMASTSYPSHVPQPSQAVRRGPKPKDSRRL 120

Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMEP-------WVIFRGKDGIPGCVQNTCAHRA 256
              ++     L+NFW+P  F+  L+   M P       WV+FR +   P C++++CAHRA
Sbjct: 121 RSSLE-LEDGLRNFWYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEHSAPTCIKDSCAHRA 179

Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGD 315
           CPL LG V  G +QCPYHGWE+   G C KMPST++   V + +LPC E++G +W+WPGD
Sbjct: 180 CPLSLGKVINGHVQCPYHGWEFDGSGACTKMPSTRMCHGVGVAALPCVEKDGFVWVWPGD 239

Query: 316 EPPTATIPCLL-PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 374
            PP    P    PP+G+++HAEI++++P+EHGLL++NLLDLAHAPFTHT+TFA+GW +P 
Sbjct: 240 GPPPDLPPDFTAPPAGYDVHAEIMVDVPVEHGLLMENLLDLAHAPFTHTTTFARGWPIPE 299

Query: 375 LVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQNTRQCATHLHQLHV 433
            V+F      L G WDPYPI M F PPC+ LSTIG+S+PGK + G    +C  HLHQLHV
Sbjct: 300 AVRFHA-TKMLAGDWDPYPISMSFNPPCIALSTIGLSQPGKIMRGYKAEECKRHLHQLHV 358

Query: 434 CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGAN 493
           C+PS    TRLLYRMSLDF    KHVPF+  LW+  A QVL EDL LVLGQQ RM  G +
Sbjct: 359 CMPSKEGHTRLLYRMSLDFWGWAKHVPFVDVLWKKIAGQVLGEDLVLVLGQQARMIGGDD 418

Query: 494 VWNLPVGYDKLGVRYRLWRDALEKG 518
            W  P+ YDKL VRYR WR+ +  G
Sbjct: 419 TWCTPMPYDKLAVRYRRWRNMVADG 443


>sp|Q9SK50|TIC55_ARATH Protein TIC 55, chloroplastic OS=Arabidopsis thaliana GN=TIC55 PE=2
           SV=1
          Length = 539

 Score =  102 bits (255), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 148/334 (44%), Gaps = 46/334 (13%)

Query: 218 WFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
           W+P+  + ++ +D            V+++  +G   C ++ C HR   L  G + +GR++
Sbjct: 88  WYPLYLTKNVPEDAPLGLTVYDRQIVLYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLE 147

Query: 271 CPYHGWEYSTDGKCEKMP----STQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 325
           C YHGW++  +GKC K+P    S ++ +   +K+    + +G++W+W   + P    P  
Sbjct: 148 CLYHGWQFEGEGKCVKIPQLPASAKIPKAACVKTYEVKDSQGVVWVWMSTKTPPN--PEK 205

Query: 326 LP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 376
           LP       P  F+I      ELP +H +LL+NL+D AH P +H  T   AK      LV
Sbjct: 206 LPWFENFARPGFFDI--STTHELPYDHSILLENLMDPAHVPISHDRTDFTAKREDAQPLV 263

Query: 377 KFLTPAS--GLQGYWDPYPID------MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 428
             +T  S  G  G W            + F  PC++ +        + EG++  +   + 
Sbjct: 264 FEVTERSNRGFAGTWGREKEGGKGSNLLRFDAPCVLQNN------REFEGKDGVK--NYF 315

Query: 429 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE-R 487
             L +C P+ + K+ L+ R  +   S L  V   Q+ W   A +V  +D+  +  Q E  
Sbjct: 316 SGLFLCRPTGQGKSMLIVRFGVTKRSPLVSV-LPQWFWHQNACKVFEQDMGFLSSQNEVL 374

Query: 488 MNNGANVWNLPVGY---DKLGVRYRLWRDALEKG 518
           M       +L +     D     YR W D +  G
Sbjct: 375 MKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHG 408


>sp|O49931|TIC55_PEA Protein TIC 55, chloroplastic OS=Pisum sativum GN=TIC55 PE=1 SV=1
          Length = 553

 Score =  101 bits (251), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 146/332 (43%), Gaps = 43/332 (12%)

Query: 218 WFPVAFSTDLKDDT-------MEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 270
           W+P+  + ++  D         +  V+FR  +    C ++ C HR   L  G + +GR++
Sbjct: 103 WYPLYLTKNVPHDAPLGLKVYDKNIVLFRDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLE 162

Query: 271 CPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPP--TATIP 323
           C YHGW++  +GKC K+P         ++  +K+    + +G++W+W   + P   + IP
Sbjct: 163 CLYHGWQFEGEGKCVKIPQLPADAKIPKSACVKTYEVRDSQGVLWVWMSRKTPPNVSKIP 222

Query: 324 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 379
                   GF+       ELP +H +LL+NL+D AH P +H  T   AK     +L   +
Sbjct: 223 WFENFARPGFQ-DISTTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQALGFEV 281

Query: 380 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI-SKPGKLEGQNTRQCATHLHQL 431
           T  +  G  G+W        P  + F  PC++ +   I  K G++          H   L
Sbjct: 282 TERTDRGFAGWWGREKDGSKPNFLRFEAPCVLQNNREIVDKNGEI---------NHFSGL 332

Query: 432 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ-----QE 486
            +C P+ + K+ L+ R      S L  + F ++ +   A +V  +D+  +  Q     +E
Sbjct: 333 FLCRPTGQGKSMLIVRFGATKRSPLIKL-FPEWYFHQNASKVFEQDMGFLSSQNEILLKE 391

Query: 487 RMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 518
           ++       NL    D     YR W D +  G
Sbjct: 392 KVPTKELYLNLKSS-DTWVAEYRKWMDKVGHG 422


>sp|P12609|VANA_PSES9 Vanillate O-demethylase oxygenase subunit OS=Pseudomonas sp.
           (strain ATCC 19151) GN=vanA PE=3 SV=1
          Length = 329

 Score = 92.4 bits (228), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 39/254 (15%)

Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 292
           E  VI+RG       +++ C HR  PL LGS+ +G++ C YHG     DG+   MP+ ++
Sbjct: 5   ERMVIYRGAGQRVAALEDFCPHRGAPLSLGSIQDGKLVCGYHGLVMDCDGRTASMPAQRV 64

Query: 293 RNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFE-----IHAEIVMELPIEHG 346
           +    I++ P  E+ G IW+WPGD       P L+P   +       +   +  +  ++ 
Sbjct: 65  QAFPCIRAFPAQERHGFIWVWPGDA--ALADPALIPHLEWAENPAWAYGGGLYHIACDYR 122

Query: 347 LLLDNLLDLAHAPFTHTST------------------------FAKGWSVPSLVKFLTPA 382
           L++DNL+DL H  + H S+                        F +G   P   +     
Sbjct: 123 LMIDNLMDLTHETYVHASSIGQKEIDEAPVSTRVEGDRLITGRFMEGILAPPFWRAALRG 182

Query: 383 SGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSS 438
           +GL    D  P+D      F PP  VL  +G++  G+        C      +    P +
Sbjct: 183 NGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAGRGGYDAPADCKASSIVVDFITPET 239

Query: 439 RKKTRLLYRMSLDF 452
                  + M+  F
Sbjct: 240 DTSIWYFWGMARSF 253


>sp|O05616|VANA_PSEUH Vanillate O-demethylase oxygenase subunit OS=Pseudomonas sp.
           (strain HR199 / DSM 7063) GN=vanA PE=3 SV=1
          Length = 354

 Score = 90.1 bits (222), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 101/238 (42%), Gaps = 39/238 (16%)

Query: 215 KNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 268
           KN W+      ++ D  +      E  V +RG +G    V++ C HR  PL LG V +G+
Sbjct: 4   KNAWYVACTPDEIADKPLGRQICNEKIVFYRGPEGRVAAVEDFCPHRGAPLSLGFVRDGK 63

Query: 269 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 327
           + C YHG E   +GK   MP  +++    IKS    E+ G IW+WPGD       P L+ 
Sbjct: 64  LICGYHGLEMGCEGKTLAMPGQRVQGFPCIKSYAVEERYGFIWVWPGDR--ELADPALIH 121

Query: 328 PSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK----- 377
              +  + E      +  +  ++ L++DNL+DL H  + H S+  +     + V      
Sbjct: 122 HLEWADNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVSTRVEG 181

Query: 378 ----------------FLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK 415
                           F   A    G  D  P+D      F PP  VL  +G++  GK
Sbjct: 182 DTVITSRYMDNVMAPPFWRAALRGNGLADDVPVDRWQICRFAPPSHVLIEVGVAHAGK 239


>sp|Q9AHG3|TSAM2_COMTE Putative toluene-4-sulfonate monooxygenase system iron-sulfur
           subunit TsaM2 OS=Comamonas testosteroni GN=tsaM2 PE=5
           SV=1
          Length = 346

 Score = 79.7 bits (195), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 27/173 (15%)

Query: 214 LKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 267
           +KN W+    +TD     +      E  V+FR  DG    +++ C HR  PL LG V + 
Sbjct: 3   VKNTWYVAGMATDCSRKPLARTFLNEKVVLFRTHDGHAVALEDRCCHRLAPLSLGDVEDA 62

Query: 268 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTAT---- 321
            I+C YHG  ++  G C ++P  +     + ++  P  E+ G++WIW GD P  A     
Sbjct: 63  GIRCRYHGMVFNASGACVEIPGQEQIPPGMCVRRFPLVERHGLLWIWMGD-PARANPDDI 121

Query: 322 -------IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 367
                   P     SG+ IH +        + L++DNLLD  H  + H +T  
Sbjct: 122 VDELWNGAPEWRTDSGY-IHYQ------ANYQLIVDNLLDFTHLAWVHPTTLG 167


>sp|Q44256|CBAA_COMTE 3-chlorobenzoate-3,4-dioxygenase oxygenase subunit OS=Comamonas
           testosteroni GN=cbaA PE=3 SV=1
          Length = 432

 Score = 78.2 bits (191), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 20/177 (11%)

Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTM--------EPWVIFRGKDGIPGCVQNTCAHRA 256
           G   P    ++ +W P   ST+L+            E  V FR   G  G + + C HR 
Sbjct: 14  GRGTPMGGLMREYWIPALKSTELEAGGSPVRLLLLGEKLVAFREPSGAVGVMDSRCPHRG 73

Query: 257 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST----QLRN-VKIKSLPCFEQEGMIWI 311
             L +G V EG ++C YHGW++S +GKC  MPS     + +N V++   P  E  G++W+
Sbjct: 74  VSLFMGRVEEGGLRCVYHGWKFSAEGKCVDMPSVRPEDEFKNSVRVARYPVKEMAGVVWV 133

Query: 312 WPGDEPPTATIPCL----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 364
           + G       +P L    LP +  ++   I ++        L+  +D +H  F H  
Sbjct: 134 YMGTRKVLPELPRLEVLNLPENEVDV---ICLQRKSNWLQNLEGEIDTSHFNFLHVG 187


>sp|P94679|TSAM1_COMTE Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1
           OS=Comamonas testosteroni GN=tsaM1 PE=1 SV=1
          Length = 347

 Score = 77.8 bits (190), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 16/168 (9%)

Query: 214 LKNFWFPVAFSTDLKDDTM-------EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 266
           ++N W+  A+ T++  + +       EP +++R   G    ++N C HR+ PLH+G    
Sbjct: 3   IRNCWYVAAWDTEIPAEGLFHRTLLNEPVLLYRDTQGRVVALENRCCHRSAPLHIGRQEG 62

Query: 267 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPC 324
             ++C YHG +++  G C ++P  +    K  IKS P  E+  ++WIW GD  P    P 
Sbjct: 63  DCVRCLYHGLKFNPSGACVEIPGQEQIPPKTCIKSYPVVERNRLVWIWMGD--PARANPD 120

Query: 325 LLPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTHTSTFA 367
            +    +    E  M+         + L++DNLLD  H  + H +T  
Sbjct: 121 DIVDYFWHDSPEWRMKPGYIHYQANYKLIVDNLLDFTHLAWVHPTTLG 168


>sp|Q8W496|PTC52_ARATH Protochlorophyllide-dependent translocon component 52,
           chloroplastic OS=Arabidopsis thaliana GN=PTC52 PE=2 SV=1
          Length = 559

 Score = 71.2 bits (173), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/346 (21%), Positives = 133/346 (38%), Gaps = 70/346 (20%)

Query: 248 VQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QLRNVKIK 298
           + +TC HR  PL  G +++ GR+QC YHGW ++  G C+ +P            +   + 
Sbjct: 123 MDDTCPHRLAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVA 182

Query: 299 SLPCFEQEGMIWIWPGDEPPTAT---------IPCLLPPSGFEIHAEIVMELPIEHGLLL 349
             P   Q  +IW WP  +P             IP L  PS  ++      ++P  + +L+
Sbjct: 183 VYPSTVQHEIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGN--RDIPYGYDVLV 240

Query: 350 DNLLDLAHAPFTHTSTF----AKGWSVPSLVK-FLTPASGLQGYW---------DPYPID 395
           +NL+D AH P+ H         KG  +  +      P + LQ             P  I+
Sbjct: 241 ENLMDPAHVPYAHYGLMRFPKPKGKYIICISNSCFNPFTNLQILLAEKIDREGGKPLEIN 300

Query: 396 ME-----------------FRPPCMVLSTIGI------SKPGKLEGQNTRQCATHLHQLH 432
           ++                 F  PC+  S+           P              L  + 
Sbjct: 301 VKKLDNKGFFSKQEWGYSNFIAPCVYRSSTDPLPEQEHEYPAPAASDKAALSKRRLSLIF 360

Query: 433 VCLPSSRKKTRLLYRMSLDFASVL-KHVPFMQYLWRHFAEQVLNEDLRLVLGQQER-MNN 490
           +C+P S  ++RL++    +F   + K VP  ++++      +L+ DL L+  ++ + +  
Sbjct: 361 ICIPVSPGRSRLIWTFPRNFGVFIDKIVP--RWVFHIGQNTILDSDLHLLHVEERKILER 418

Query: 491 GANVWN----LPVGYDKLGVRYRLWRDALEKG-----AKQLPFMKP 527
           G   W     +P   D   V +R W +   +       K  PF+ P
Sbjct: 419 GPENWQKACFIPTKSDANVVTFRRWFNKYSEARVDWRGKFDPFLLP 464


>sp|Q52185|POBA_PSEPS Phenoxybenzoate dioxygenase subunit alpha OS=Pseudomonas
           pseudoalcaligenes GN=pobA PE=2 SV=1
          Length = 409

 Score = 70.9 bits (172), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 30/219 (13%)

Query: 197 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM------EPWVIFRGKDGIPGCVQN 250
           P   L+      P    L+ +W PVA S D+ D         E  V+FR K G PG +  
Sbjct: 24  PDPQLSAVAKGTPTGEYLRRYWQPVALSADVTDRPQMVRILGEDLVLFRDKAGRPGLLYP 83

Query: 251 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKS-----LPCFEQ 305
            C HR   L+ G V E  I+C YHGW ++ DG C   P      ++ ++      P  E+
Sbjct: 84  RCMHRGTSLYYGHVEEAGIRCCYHGWLFAVDGTCLNQPCEPEGGLRREAARQPWYPVEER 143

Query: 306 EGMIWIWPGDEPPTATIP-------------CLLPPSGFEIHAEIVMELPIEHGLL--LD 350
            G+++ + G       +P               +   GF  +A+ V +  + +  L   +
Sbjct: 144 YGLVFAYMGPPEKKPVLPRYDILEDLEEGEFIEVISGGFVSYADHVEDPNVPYHWLQNWE 203

Query: 351 NLLDLAHAPFTHTS----TFAKGWSVPSLVKFLTPASGL 385
           N++D  H    H++     FA+ + +   V F     G+
Sbjct: 204 NIMDPYHVYILHSTFSGIQFAENFKILPRVDFEAVDGGV 242


>sp|Q9FYC2|PAO_ARATH Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana
           GN=PAO PE=1 SV=1
          Length = 537

 Score = 65.1 bits (157), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 130/314 (41%), Gaps = 48/314 (15%)

Query: 213 RLKNFWFPVAFSTDLKDDTMEPWVI--------FRGKDGIPGCVQNTCAHRACPLHLGSV 264
           + ++ W+PV+   DL  +   P+ +        F   D       + C HR  PL  G +
Sbjct: 83  KWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRL 142

Query: 265 NE-GRIQCPYHGWEYSTDGKCEKMPST-----QLRNVK------IKSLPCFEQEGMIWIW 312
           +E G +QC YHGW +   G C ++P       + R VK      IK  P    +G++++W
Sbjct: 143 DENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPRACAIK-FPTMVSQGLLFVW 201

Query: 313 PGD---------EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH- 362
           P +         EPP   +P       F     I  +L   +  L++N+ D +H  F H 
Sbjct: 202 PDENGWDRANSIEPP--RLPDDFDKPEFST-VTIQRDLFYGYDTLMENVSDPSHIDFAHH 258

Query: 363 --TSTFAKGWSVPSLVKFLTPASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQ 419
             T    +   +P  V+   P  G QG  D  P I  +F  PC  ++ I +    KL   
Sbjct: 259 KVTGRRDRAKPLPFKVESSGPW-GFQGANDDSPRITAKFVAPCYSMNKIELD--AKLPIV 315

Query: 420 NTRQCATHLHQLHVCLPSSRKKT-----RLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 474
             ++    +   ++ +   + ++     R  ++ S+   +  + VP     + H+   ++
Sbjct: 316 GNQKWVIWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVP---RWYEHWTSNLV 372

Query: 475 NEDLRLVLGQQERM 488
            +   +VL  QE++
Sbjct: 373 YDGDMIVLQGQEKV 386


>sp|Q05183|PHT3_PSEPU Phthalate 4,5-dioxygenase oxygenase subunit OS=Pseudomonas putida
           GN=pht3 PE=2 SV=1
          Length = 439

 Score = 55.8 bits (133), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 17/135 (12%)

Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMEP---------WVIFRGKDGIPGCVQNTCAHRACPL 259
           P    ++  W PV    ++ +    P          V+FR  DG  G +   C HR   L
Sbjct: 18  PMGQMMRRHWTPVCLLEEVSEPDGTPVRARLFGEDLVVFRDTDGRVGVMDEYCPHRRVSL 77

Query: 260 HLGSVNEGRIQCPYHGWEYSTDGKCEKM-----PSTQLRNVKIKSLPCFEQEGMIWIWPG 314
             G      ++C YHGW+   DG   +M      S   + VK  +    E  G +W + G
Sbjct: 78  IYGRNENSGLRCLYHGWKMDVDGNVVEMVSEPAASNMCQKVKHTAYKTREWGGFVWAYMG 137

Query: 315 DEPPTATIPCLLPPS 329
              P   IP  +PP+
Sbjct: 138 ---PQDAIPEFVPPA 149


>sp|D5IGG0|CARAA_SPHSX Carbazole 1,9a-dioxygenase, terminal oxygenase component CarAa
           OS=Sphingomonas sp. GN=carAa PE=1 SV=1
          Length = 378

 Score = 54.7 bits (130), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 21/174 (12%)

Query: 214 LKNFWFPVAFSTDLKDDTMEPWVIFRGK------DGIPGCVQNTCAHRACPL--HLGSVN 265
            +N W+PV  ++++ + T  P  +   K       G    +Q+ C HR   L   +   +
Sbjct: 25  FRNHWYPVRLASEIAEGTPVPVKLLGEKILLNRVGGKVYAIQDRCLHRGVTLSDRVECYS 84

Query: 266 EGRIQCPYHGWEYS-TDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 320
           +  I C YHGW Y   DG+   +     S Q+    +K+ P  E +G+I+++ GD  PT 
Sbjct: 85  KNTISCWYHGWTYRWDDGRLVDILTNPGSVQIGRRALKTFPVEEAKGLIFVYVGDGEPTP 144

Query: 321 TIPCLLPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 369
            I  +  P GF      IH +  + +     L  +N  D  H      S   KG
Sbjct: 145 LIEDV--PPGFLDENRAIHGQHRL-VASNWRLGAENGFDAGHVLIHKNSILVKG 195


>sp|Q17938|DAF36_CAEEL Cholesterol desaturase daf-36 OS=Caenorhabditis elegans GN=daf-36
           PE=1 SV=2
          Length = 428

 Score = 52.4 bits (124), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 20/194 (10%)

Query: 216 NFWFPVAFSTDLKDD-TMEPWVI------FRGKDGIPGCVQNTCAHRACPLHLGS--VNE 266
           N W+ V  S  L ++  ME  V+       R + G      + C H     ++G   V +
Sbjct: 79  NGWYCVCESEKLANNQIMEITVLGQFLSLIRSESGAVYITDSYCPHIGANFNIGGRVVRD 138

Query: 267 GRIQCPYHGWEYSTD-GKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIW---PGDEPPT 319
             IQCP+HGW +S + GKC ++P  + R     K+ + PC E+   I++W    G EP  
Sbjct: 139 NCIQCPFHGWIFSAETGKCVEVPYDEGRIPEQAKVTTWPCIERNNNIYLWYHCDGAEPEW 198

Query: 320 ATIPCLLPPSGF-EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 376
                     GF  +      E+      + +N  D+AH  + H S     KG  +    
Sbjct: 199 EIPEITEITDGFWHLGGRTEHEVMCHIQEIPENGADIAHLNYLHKSAPPVTKGSDIIK-T 257

Query: 377 KFLTPASGLQGYWD 390
               P   +Q  WD
Sbjct: 258 DLSDPQPAVQHVWD 271


>sp|P71875|KSHA_MYCTU 3-ketosteroid-9-alpha-monooxygenase oxygenase subunit
           OS=Mycobacterium tuberculosis GN=kshA PE=1 SV=2
          Length = 386

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 9/136 (6%)

Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--R 293
           V+F    G    +   C H    L  G+V    + CP+H W +  DG+C+ +P  +   R
Sbjct: 51  VVFADSHGDLKVLDGYCRHMGGDLSEGTVKGDEVACPFHDWRWGGDGRCKLVPYARRTPR 110

Query: 294 NVKIKSLPCFEQEGMIWIW---PGDEP-PTATIPCLLPPSGFEIHAEIVMELPIEHGL-- 347
             + +S     + G++++W    G+ P P   IP +   +  E        + IE     
Sbjct: 111 MARTRSWTTDVRSGLLFVWHDHEGNPPDPAVRIPEIPEAASDEWTDWRWNRILIEGSNCR 170

Query: 348 -LLDNLLDLAHAPFTH 362
            ++DN+ D+AH  + H
Sbjct: 171 DIIDNVTDMAHFFYIH 186


>sp|Q8G8B6|CARAA_PSERE Carbazole 1,9a-dioxygenase, terminal oxygenase component CarAa
           OS=Pseudomonas resinovorans GN=carAa PE=1 SV=1
          Length = 384

 Score = 48.9 bits (115), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 25/175 (14%)

Query: 214 LKNFWFPVAFSTDLKDDTMEPW--------VIFRGKDGIPGCVQNTCAHRACPLHLG--S 263
            +N W+PV FS ++  D  EP         ++    DG   C+++ C HR   L +    
Sbjct: 25  FRNHWYPVMFSKEI--DEGEPKTLKLLGENLLVNRIDGKLYCLKDRCLHRGVQLSVKVEC 82

Query: 264 VNEGRIQCPYHGWEYS-TDGK-CEKM---PSTQLRNVKIKSLPCFEQEGMIWIW--PGDE 316
             +  I C YH W Y   DG  C+ +    S Q+   K+K+ P  E +G ++I+   GD 
Sbjct: 83  KTKSTITCWYHAWTYRWEDGVLCDILTNPTSAQIGRQKLKTYPVQEAKGCVFIYLGDGDP 142

Query: 317 PPTATIPCLLPPSGFEIHAEIVMELPIEHG---LLLDNLLDLAHAPFTHTSTFAK 368
           PP A      PP+  +   EI+ +  I      L ++N  D +H      S   K
Sbjct: 143 PPLARD---TPPNFLDDDMEILGKNQIIKSNWRLAVENGFDPSHIYIHKDSILVK 194


>sp|A0R4R3|KSHA_MYCS2 3-ketosteroid-9-alpha-monooxygenase oxygenase subunit
           OS=Mycobacterium smegmatis (strain ATCC 700084 /
           mc(2)155) GN=kshA PE=1 SV=1
          Length = 383

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 9/136 (6%)

Query: 236 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--R 293
           V+F    G    +   C H    L  G+V    + CP+H W +  DGKC+ +P  +   R
Sbjct: 49  VVFADSKGELNVLDAYCRHMGGDLSKGTVKGDEVACPFHDWRWGGDGKCKLVPYAKRTPR 108

Query: 294 NVKIKSLPCFEQEGMIWIW---PGDEP-PTATIPCLLPPSGFEIHAEIVMELPIEHG--- 346
             + +S     + G++++W    G+ P P   IP +      E        + IE     
Sbjct: 109 LARTRSWHTDVRGGLLFVWHDHEGNPPQPEVRIPEIPEWHSGEWTDWKWNSMLIEGSNCR 168

Query: 347 LLLDNLLDLAHAPFTH 362
            ++DN+ D+AH  + H
Sbjct: 169 EIIDNVTDMAHFFYIH 184


>sp|O22553|CHMO_BETVU Choline monooxygenase, chloroplastic OS=Beta vulgaris GN=CMO PE=2
           SV=1
          Length = 446

 Score = 46.2 bits (108), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 235 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-STQLR 293
           +++ R   G      N C HRA  L  GS  +    CPYHGW Y  DG   K   +T+ +
Sbjct: 152 YLVSRDGQGELHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGLDGSLAKASKATETQ 211

Query: 294 NVKIKSL 300
           N+  K L
Sbjct: 212 NLDPKEL 218


>sp|P0ABR7|YEAW_ECOLI Putative dioxygenase subunit alpha YeaW OS=Escherichia coli (strain
           K12) GN=yeaW PE=3 SV=1
          Length = 374

 Score = 45.4 bits (106), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 67/175 (38%), Gaps = 35/175 (20%)

Query: 218 WFPVAFSTDL--------KDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR- 268
           W  VA S++L        ++   E  V+ RG+D +     N C HR   L  G   EG+ 
Sbjct: 47  WICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSG---EGKA 103

Query: 269 ---IQCPYHGWEYSTDG------KCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPT 319
              I CPYH W +  DG       CE + +      ++  +   E  G ++I    +P  
Sbjct: 104 KNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFI--NMDPNA 161

Query: 320 ATIPCLLPPSGF-------EIH-----AEIVMELPIEHGLLLDNLLDLAHAPFTH 362
            ++   LP  G        E+H     A      P     ++DN L+  H    H
Sbjct: 162 TSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAH 216


>sp|P0ABR8|YEAW_ECO57 Putative dioxygenase subunit alpha YeaW OS=Escherichia coli O157:H7
           GN=yeaW PE=3 SV=1
          Length = 374

 Score = 45.4 bits (106), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 67/175 (38%), Gaps = 35/175 (20%)

Query: 218 WFPVAFSTDL--------KDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR- 268
           W  VA S++L        ++   E  V+ RG+D +     N C HR   L  G   EG+ 
Sbjct: 47  WICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSG---EGKA 103

Query: 269 ---IQCPYHGWEYSTDG------KCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPT 319
              I CPYH W +  DG       CE + +      ++  +   E  G ++I    +P  
Sbjct: 104 KNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFI--NMDPNA 161

Query: 320 ATIPCLLPPSGF-------EIH-----AEIVMELPIEHGLLLDNLLDLAHAPFTH 362
            ++   LP  G        E+H     A      P     ++DN L+  H    H
Sbjct: 162 TSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAH 216


>sp|O04121|CHMO_SPIOL Choline monooxygenase, chloroplastic OS=Spinacia oleracea GN=CMO
           PE=1 SV=1
          Length = 439

 Score = 45.4 bits (106), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 25/52 (48%)

Query: 235 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEK 286
           +++ R  +G      N C HRA  L  GS  +    CPYHGW Y  DG   K
Sbjct: 145 YLVSRDGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGMDGSLAK 196


>sp|Q7N4W0|HCAE_PHOLL 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Photorhabdus luminescens subsp. laumondii (strain
           TT01) GN=hcaE PE=3 SV=1
          Length = 453

 Score = 45.1 bits (105), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)

Query: 223 FSTDLKDDTMEPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYSTD 281
           F+T + +D++   V+ R K+G      N C HR+  + +  S N     CPYHGW Y  D
Sbjct: 59  FNTYMGEDSV---VVVRQKNGSVKAFLNQCRHRSMRVCYADSGNTRAFTCPYHGWSYGVD 115

Query: 282 GKCEKMP 288
           G+   +P
Sbjct: 116 GRLIDVP 122


>sp|Q83K39|HCAE_SHIFL 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Shigella flexneri GN=hcaE PE=3 SV=1
          Length = 453

 Score = 44.7 bits (104), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 223 FSTDLKDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTD 281
           F+T + +D +   V+ R KDG      N C HRA  +        R   CPYHGW Y  +
Sbjct: 59  FNTYMGEDAV---VVVRQKDGSIKAFLNQCRHRAMRVSYADCGNSRAFTCPYHGWSYGIN 115

Query: 282 GKCEKMP 288
           G+   +P
Sbjct: 116 GELIDVP 122


>sp|A8A344|HCAE_ECOHS 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Escherichia coli O9:H4 (strain HS) GN=hcaE PE=3 SV=1
          Length = 453

 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 223 FSTDLKDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTD 281
           F+T + +D +   V+ R KDG      N C HRA  +        R   CPYHGW Y  +
Sbjct: 59  FNTYMGEDAV---VVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGIN 115

Query: 282 GKCEKMP 288
           G+   +P
Sbjct: 116 GELIDVP 122


>sp|Q3YZ15|HCAE_SHISS 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Shigella sonnei (strain Ss046) GN=hcaE PE=3 SV=1
          Length = 453

 Score = 43.9 bits (102), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 223 FSTDLKDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTD 281
           F+T + +D +   V+ R KDG      N C HRA  +        R   CPYHGW Y  +
Sbjct: 59  FNTYMGEDAV---VVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGIN 115

Query: 282 GKCEKMP 288
           G+   +P
Sbjct: 116 GELIDVP 122


>sp|Q31XV2|HCAE_SHIBS 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Shigella boydii serotype 4 (strain Sb227) GN=hcaE
           PE=3 SV=1
          Length = 453

 Score = 43.9 bits (102), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 223 FSTDLKDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTD 281
           F+T + +D +   V+ R KDG      N C HRA  +        R   CPYHGW Y  +
Sbjct: 59  FNTYMGEDAV---VVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGIN 115

Query: 282 GKCEKMP 288
           G+   +P
Sbjct: 116 GELIDVP 122


>sp|P0ABR5|HCAE_ECOLI 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Escherichia coli (strain K12) GN=hcaE PE=1 SV=1
          Length = 453

 Score = 43.9 bits (102), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 223 FSTDLKDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTD 281
           F+T + +D +   V+ R KDG      N C HRA  +        R   CPYHGW Y  +
Sbjct: 59  FNTYMGEDAV---VVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGIN 115

Query: 282 GKCEKMP 288
           G+   +P
Sbjct: 116 GELIDVP 122


>sp|P0ABR6|HCAE_ECO57 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Escherichia coli O157:H7 GN=hcaE PE=3 SV=1
          Length = 453

 Score = 43.9 bits (102), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 223 FSTDLKDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTD 281
           F+T + +D +   V+ R KDG      N C HRA  +        R   CPYHGW Y  +
Sbjct: 59  FNTYMGEDAV---VVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGIN 115

Query: 282 GKCEKMP 288
           G+   +P
Sbjct: 116 GELIDVP 122


>sp|Q0T1Y1|HCAE_SHIF8 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha
           OS=Shigella flexneri serotype 5b (strain 8401) GN=hcaE
           PE=3 SV=1
          Length = 453

 Score = 43.9 bits (102), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 223 FSTDLKDDTMEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR-IQCPYHGWEYSTD 281
           F+T + +D +   V+ R KDG      N C HRA  +        R   CPYHGW Y  +
Sbjct: 59  FNTYMGEDAV---VVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGIN 115

Query: 282 GKCEKMP 288
           G+   +P
Sbjct: 116 GELIDVP 122


>sp|Q93XE1|CHMO_AMATR Choline monooxygenase, chloroplastic OS=Amaranthus tricolor GN=CMO
           PE=2 SV=1
          Length = 442

 Score = 43.9 bits (102), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 32/76 (42%)

Query: 235 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN 294
           +++ R   G      N C HRA  L  G+  +    CPYHGW +  DG   K   T+ + 
Sbjct: 148 YLVCRDGQGKVHAFHNVCTHRASILACGTGKKSCFVCPYHGWVFGLDGSLMKATKTENQV 207

Query: 295 VKIKSLPCFEQEGMIW 310
              K L     +  IW
Sbjct: 208 FDPKELGLVTLKVAIW 223


>sp|Q9LKN0|CHMO_ATRHO Choline monooxygenase, chloroplastic OS=Atriplex hortensis GN=CMO
           PE=2 SV=1
          Length = 438

 Score = 43.5 bits (101), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 25/52 (48%)

Query: 235 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEK 286
           +++ R  +G      N C HRA  L  GS  +    CPYHGW Y  +G   K
Sbjct: 146 YLVCRDGEGKVHAFHNVCTHRASILACGSGKKSCFVCPYHGWVYGMNGSLTK 197


>sp|P23099|XYLX_PSEPU Toluate 1,2-dioxygenase subunit alpha OS=Pseudomonas putida GN=xylX
           PE=3 SV=1
          Length = 454

 Score = 41.6 bits (96), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYSTDGKCEKM 287
           +P  I R KDG      N C+HR   L    S N+    C +HGW +S  GK  K+
Sbjct: 73  QPIFITRNKDGELNAFVNACSHRGATLCRFRSGNKATHTCSFHGWTFSNSGKLLKV 128


>sp|Q51601|CBDA_BURCE 2-halobenzoate 1,2-dioxygenase large subunit OS=Burkholderia
           cepacia GN=cbdA PE=1 SV=3
          Length = 465

 Score = 41.6 bits (96), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ 291
           +P +I R K G    V N C+HR   L      N     C +HGW +S  GK  K+   Q
Sbjct: 79  QPVIITRNKAGDVSAVINACSHRGAELCRRKQGNRSTFTCQFHGWTFSNTGKLLKVKDGQ 138

Query: 292 LRN 294
             N
Sbjct: 139 DDN 141


>sp|Q8GI16|CARAC_PSERE Ferredoxin CarAc OS=Pseudomonas resinovorans GN=carAc PE=1 SV=1
          Length = 107

 Score = 40.0 bits (92), Expect = 0.043,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 12/106 (11%)

Query: 214 LKNFWFPVAFSTDLKDDTME--------PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 265
           +   W  V  ++D++  T+         P  ++R  D      ++TC H    L  G+++
Sbjct: 1   MNQIWLKVCAASDMQPGTIRRVNRVGAAPLAVYRVGDQFYA-TEDTCTHGIASLSEGTLD 59

Query: 266 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWI 311
              I+CP+HG  ++    C  MP++    V +       +EG +++
Sbjct: 60  GDVIECPFHGGAFNV---CTGMPASSPCTVPLGVFEVEVKEGEVYV 102


>sp|O52379|NAGG_RALSP Salicylate 5-hydroxylase, large oxygenase component OS=Ralstonia
           sp. GN=nagG PE=1 SV=1
          Length = 423

 Score = 40.0 bits (92), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 236 VIFRGKDGIPGCVQNTCAHRA---CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP 288
           ++ R  DG    V+N CAHR    C    G+  +    CPYH W YS  G  + +P
Sbjct: 75  IMVRDPDGGINVVENVCAHRGMRFCRERHGNAKD--FFCPYHQWNYSLKGDLQGVP 128


>sp|P07769|BENA_ACIAD Benzoate 1,2-dioxygenase subunit alpha OS=Acinetobacter sp. (strain
           ADP1) GN=benA PE=3 SV=2
          Length = 461

 Score = 40.0 bits (92), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ 291
           +P +I R ++G    + N C+HR   L      N+    CP+HGW ++  GK  K+    
Sbjct: 76  QPILIARNRNGELNAMINACSHRGAQLCRHKRGNKTTYTCPFHGWTFNNSGKLLKVKDPS 135

Query: 292 LRNVKIKSLPCFEQEG 307
                     CF Q+G
Sbjct: 136 DAGYS----DCFNQDG 147


>sp|Q9SZR0|CHMO_ARATH Choline monooxygenase, chloroplastic OS=Arabidopsis thaliana
           GN=At4g29890 PE=2 SV=2
          Length = 422

 Score = 39.3 bits (90), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 235 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN 294
           +V+ R ++G      N C+H A  L  G+  +    C YHGW YS  G   K  +T++  
Sbjct: 121 FVVCRDENGKIHAFHNVCSHHASILASGNGRKSCFVCLYHGWTYSLSGSLVK--ATRMSG 178

Query: 295 VKIKSL 300
           ++  SL
Sbjct: 179 IQNFSL 184


>sp|O85673|ANTDA_ACIAD Anthranilate 1,2-dioxygenase large subunit OS=Acinetobacter sp.
           (strain ADP1) GN=antA PE=1 SV=1
          Length = 471

 Score = 39.3 bits (90), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 233 EPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 289
           +P ++ R   G    + N C HR   L  +   N+    CP+H W Y +DG+  K+ +
Sbjct: 74  QPMIVSRDGKGELHAMVNACEHRGATLTRVAKGNQSVFTCPFHAWCYKSDGRLVKVKA 131


>sp|Q07944|BEDC1_PSEPU Benzene 1,2-dioxygenase subunit alpha OS=Pseudomonas putida
           GN=bedC1 PE=1 SV=1
          Length = 450

 Score = 38.9 bits (89), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 223 FSTDLKDDTMEPWVIFRGKDGIPGCVQNTCAHRA---CPLHLGSVNEGRIQCPYHGWEYS 279
           F+T + +D   P V+ R KD       N C HR    C    G  N     C YHGW Y 
Sbjct: 70  FTTYMGED---PVVVVRQKDASIAVFLNQCRHRGMRICRSDAG--NAKAFTCSYHGWAYD 124

Query: 280 TDGKCEKMPSTQLRNVKIKSLPCFEQE 306
           T G    +P       + +S  C +++
Sbjct: 125 TAGNLINVP------YEAESFACLDKK 145


>sp|P0C618|BNZA_PSEPU Benzene 1,2-dioxygenase subunit alpha OS=Pseudomonas putida GN=bnzA
           PE=3 SV=1
          Length = 450

 Score = 38.5 bits (88), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 233 EPWVIFRGKDGIPGCVQNTCAHRA---CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP 288
           +P V+ R KD       N C HR    C    G  N     C YHGW Y T G    +P
Sbjct: 77  DPVVVVRQKDASIAVFLNQCRHRGMRICRADAG--NAKAFTCSYHGWAYDTAGNLVNVP 133


>sp|A5W4F2|BNZA_PSEP1 Benzene 1,2-dioxygenase subunit alpha OS=Pseudomonas putida (strain
           F1 / ATCC 700007) GN=bnzA PE=1 SV=1
          Length = 450

 Score = 38.5 bits (88), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 233 EPWVIFRGKDGIPGCVQNTCAHRA---CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP 288
           +P V+ R KD       N C HR    C    G  N     C YHGW Y T G    +P
Sbjct: 77  DPVVVVRQKDASIAVFLNQCRHRGMRICRADAG--NAKAFTCSYHGWAYDTAGNLVNVP 133


>sp|Q93SW8|UCRIB_NOSS1 Cytochrome b6-f complex iron-sulfur subunit 2 OS=Nostoc sp. (strain
           PCC 7120 / UTEX 2576) GN=petC2 PE=3 SV=1
          Length = 178

 Score = 38.1 bits (87), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 233 EPWVIFRGKDGI--PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 290
           EP  +   +DG   P  + N C H  C      V++ + QCP HG  Y   G  E+ P+ 
Sbjct: 86  EPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQ-QFQCPCHGSRYDAQGSVERGPA- 143

Query: 291 QLRNVKIKSLPCFEQEGMIWIWPGDE 316
              N  +K +    ++  IWI P  E
Sbjct: 144 ---NRPLKLVQVQVKDDYIWISPWQE 166


>sp|O52382|NDOB_RALSP Naphthalene 1,2-dioxygenase subunit alpha OS=Ralstonia sp. GN=nagAc
           PE=1 SV=1
          Length = 447

 Score = 38.1 bits (87), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 10/94 (10%)

Query: 236 VIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYSTDGKCEKMP------ 288
           ++ R  DG      N C HR   L H  + N     C YHGW + ++G+ + +P      
Sbjct: 63  IVSRQNDGSVRAFLNVCRHRGKTLVHAEAGNAKGFVCSYHGWGFGSNGELQSVPFEKELY 122

Query: 289 --STQLRNVKIKSLPCFEQ-EGMIWIWPGDEPPT 319
             + + + + +K +P  E   G I+     E PT
Sbjct: 123 GDTIKKKCLGLKEVPRIESFHGFIYGCFDAEAPT 156


>sp|Q93SW6|UCRIB_ANAVT Cytochrome b6-f complex iron-sulfur subunit 2 OS=Anabaena
           variabilis (strain ATCC 29413 / PCC 7937) GN=petC2 PE=3
           SV=1
          Length = 178

 Score = 37.4 bits (85), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 15/98 (15%)

Query: 233 EPWVIFRGKDGI--PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 290
           EP  +   +DG   P  + N C H  C      V++ + QCP HG  Y   G  E+ P+ 
Sbjct: 86  EPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQ-QFQCPCHGSRYDAQGSVERGPAN 144

Query: 291 ---QLRNVKIKSLPCFEQEGMIWI--WPGDEPPTATIP 323
              +L +V++K       +  IWI  W   +P T   P
Sbjct: 145 RPLKLVHVQVK-------DDYIWISSWQETDPRTGEKP 175


>sp|Q65SI5|RNB_MANSM Exoribonuclease 2 OS=Mannheimia succiniciproducens (strain MBEL55E)
           GN=rnb PE=3 SV=1
          Length = 659

 Score = 37.4 bits (85), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 6/93 (6%)

Query: 417 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK---HVPFMQYLWRHFAEQV 473
           E ++T+Q    LHQ  +   + RKK  LL++   D++ VL    HV  ++  +R  A Q+
Sbjct: 335 ENESTQQQINWLHQFALVRINWRKKHGLLFKEKPDYSFVLADNGHVREIKAEYRRIANQI 394

Query: 474 LNEDL---RLVLGQQERMNNGANVWNLPVGYDK 503
           + E +    +        N    ++N  VG+DK
Sbjct: 395 VEESMIIANICCAHYLAKNAQTGIFNTHVGFDK 427


>sp|Q51494|NDOB_PSEAI Naphthalene 1,2-dioxygenase subunit alpha OS=Pseudomonas aeruginosa
           GN=ndoB PE=3 SV=1
          Length = 449

 Score = 37.4 bits (85), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 236 VIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYSTDGKCEKMP 288
           ++ R  DG      N C HR   L H  + N     C YHGW +  +G+ + +P
Sbjct: 65  IVSRQNDGSIRAFLNVCRHRGKTLVHAEAGNAKGFVCSYHGWGFGANGELQSVP 118


>sp|P0A111|NDOB_PSEU8 Naphthalene 1,2-dioxygenase subunit alpha OS=Pseudomonas sp.
           (strain C18) GN=doxB PE=1 SV=1
          Length = 449

 Score = 35.8 bits (81), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 236 VIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRIQCPYHGWEYSTDGKCEKMP 288
           ++ R  DG      N C HR   L  + + N     C YHGW + ++G+ + +P
Sbjct: 65  IVSRQNDGSIRAFLNVCRHRGKTLVSVEAGNAKGFVCSYHGWGFGSNGELQSVP 118


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.136    0.429 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 205,824,910
Number of Sequences: 539616
Number of extensions: 8934523
Number of successful extensions: 18543
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 18454
Number of HSP's gapped (non-prelim): 91
length of query: 528
length of database: 191,569,459
effective HSP length: 122
effective length of query: 406
effective length of database: 125,736,307
effective search space: 51048940642
effective search space used: 51048940642
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)