Query 009691
Match_columns 528
No_of_seqs 196 out of 1529
Neff 6.4
Searched_HMMs 46136
Date Thu Mar 28 16:11:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009691.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009691hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1169 Diacylglycerol kinase 100.0 9E-76 1.9E-80 631.4 23.5 379 44-478 214-626 (634)
2 KOG0782 Predicted diacylglycer 100.0 8E-66 1.7E-70 536.6 16.7 337 72-476 362-701 (1004)
3 KOG1170 Diacylglycerol kinase 100.0 6.8E-63 1.5E-67 530.6 7.4 419 46-512 158-837 (1099)
4 PRK13057 putative lipid kinase 100.0 1.3E-41 2.7E-46 346.5 32.8 274 79-472 1-285 (287)
5 PRK13059 putative lipid kinase 100.0 5.2E-41 1.1E-45 343.5 32.3 278 76-472 2-293 (295)
6 PRK11914 diacylglycerol kinase 100.0 1.8E-40 4E-45 340.7 32.8 287 74-473 7-305 (306)
7 TIGR03702 lip_kinase_YegS lipi 100.0 1.4E-40 2.9E-45 340.0 31.6 282 77-473 1-289 (293)
8 PRK13054 lipid kinase; Reviewe 100.0 5.1E-40 1.1E-44 336.8 33.7 286 74-474 2-296 (300)
9 PRK13055 putative lipid kinase 100.0 4.5E-40 9.8E-45 342.2 32.9 286 76-472 3-301 (334)
10 PRK13337 putative lipid kinase 100.0 8.6E-40 1.9E-44 335.7 32.3 283 76-473 2-295 (304)
11 PRK00861 putative lipid kinase 100.0 4.8E-39 1E-43 329.4 34.1 281 76-473 3-298 (300)
12 TIGR00147 lipid kinase, YegS/R 100.0 4.9E-39 1.1E-43 327.8 31.5 279 76-469 2-292 (293)
13 COG1597 LCB5 Sphingosine kinas 100.0 8.1E-38 1.7E-42 320.8 31.3 286 75-475 2-299 (301)
14 PRK12361 hypothetical protein; 100.0 1.2E-36 2.6E-41 335.6 32.5 287 75-473 242-543 (547)
15 PLN02958 diacylglycerol kinase 100.0 8.1E-36 1.7E-40 323.4 29.8 295 74-470 110-464 (481)
16 PF00609 DAGK_acc: Diacylglyce 100.0 1.3E-37 2.9E-42 291.9 13.2 160 270-444 2-161 (161)
17 PLN02204 diacylglycerol kinase 100.0 1.2E-30 2.6E-35 283.8 32.6 315 73-472 157-598 (601)
18 smart00045 DAGKa Diacylglycero 99.9 8.9E-24 1.9E-28 197.9 10.2 159 270-444 2-160 (160)
19 PF00781 DAGK_cat: Diacylglyce 99.9 6.4E-22 1.4E-26 178.7 12.5 122 77-223 1-128 (130)
20 KOG1116 Sphingosine kinase, in 99.9 3.2E-20 6.9E-25 199.3 22.3 299 74-473 178-568 (579)
21 smart00046 DAGKc Diacylglycero 99.8 4.4E-21 9.6E-26 172.4 11.5 100 79-193 1-101 (124)
22 KOG1115 Ceramide kinase [Lipid 99.5 4.3E-13 9.3E-18 138.3 15.9 297 74-462 157-500 (516)
23 KOG4435 Predicted lipid kinase 98.6 2.1E-07 4.5E-12 96.7 10.9 131 74-219 59-195 (535)
24 PRK03708 ppnK inorganic polyph 98.0 3.7E-05 8E-10 78.6 10.6 111 77-215 2-115 (277)
25 PRK02645 ppnK inorganic polyph 97.9 8.5E-05 1.8E-09 77.0 11.6 123 75-225 3-128 (305)
26 PRK03378 ppnK inorganic polyph 97.5 0.00064 1.4E-08 70.1 11.3 124 75-224 5-131 (292)
27 PRK14075 pnk inorganic polypho 97.5 0.047 1E-06 55.3 23.5 48 414-471 189-236 (256)
28 COG3199 Predicted inorganic po 97.2 0.0015 3.2E-08 67.9 9.2 63 137-212 93-157 (355)
29 PRK01231 ppnK inorganic polyph 97.1 0.0079 1.7E-07 62.2 12.9 121 76-224 5-130 (295)
30 PF01513 NAD_kinase: ATP-NAD k 96.9 0.0056 1.2E-07 62.8 10.3 69 142-224 76-144 (285)
31 PRK14077 pnk inorganic polypho 96.4 0.048 1.1E-06 56.2 12.8 123 72-223 7-131 (287)
32 PRK04539 ppnK inorganic polyph 96.3 0.054 1.2E-06 56.1 12.9 127 75-223 5-135 (296)
33 PRK02155 ppnK NAD(+)/NADH kina 96.3 0.047 1E-06 56.4 12.4 123 76-224 6-131 (291)
34 PRK03372 ppnK inorganic polyph 96.2 0.079 1.7E-06 55.1 13.1 129 74-222 4-138 (306)
35 PRK01911 ppnK inorganic polyph 95.7 0.18 3.9E-06 52.2 13.1 126 78-223 3-131 (292)
36 PRK02649 ppnK inorganic polyph 95.5 0.17 3.7E-06 52.6 12.3 128 76-223 2-135 (305)
37 PLN02935 Bifunctional NADH kin 95.5 0.23 5E-06 54.7 13.7 130 74-222 193-328 (508)
38 PRK03501 ppnK inorganic polyph 95.4 0.23 5E-06 50.6 12.5 105 76-223 3-108 (264)
39 PRK00561 ppnK inorganic polyph 94.5 0.42 9.2E-06 48.6 11.6 74 394-470 164-240 (259)
40 PRK04885 ppnK inorganic polyph 94.4 0.36 7.7E-06 49.3 10.8 98 78-219 3-100 (265)
41 PRK14076 pnk inorganic polypho 93.7 0.64 1.4E-05 52.5 12.3 66 143-222 349-414 (569)
42 PLN02727 NAD kinase 93.0 0.65 1.4E-05 54.5 10.8 124 73-214 676-801 (986)
43 PRK01185 ppnK inorganic polyph 91.7 2.3 5E-05 43.6 12.1 113 78-223 3-116 (271)
44 PRK02231 ppnK inorganic polyph 91.0 1.4 2.9E-05 45.3 9.5 67 143-223 43-110 (272)
45 PLN02929 NADH kinase 90.1 1.7 3.7E-05 45.2 9.4 70 142-219 64-144 (301)
46 PF10254 Pacs-1: PACS-1 cytoso 88.5 1.7 3.6E-05 47.0 8.2 48 142-190 75-128 (414)
47 PRK04761 ppnK inorganic polyph 87.8 0.73 1.6E-05 46.5 4.7 35 142-180 25-59 (246)
48 COG0061 nadF NAD kinase [Coenz 84.9 4.8 0.0001 41.4 9.0 70 142-225 55-124 (281)
49 cd08197 DOIS 2-deoxy-scyllo-in 80.8 6.2 0.00013 41.9 8.2 96 76-183 24-125 (355)
50 cd08180 PDD 1,3-propanediol de 78.0 12 0.00027 39.0 9.4 44 143-187 79-128 (332)
51 cd08169 DHQ-like Dehydroquinat 74.8 13 0.00029 39.2 8.5 97 76-184 24-125 (344)
52 cd08179 NADPH_BDH NADPH-depend 74.7 14 0.00031 39.3 8.9 46 143-189 82-147 (375)
53 PF00731 AIRC: AIR carboxylase 72.4 17 0.00037 34.0 7.6 81 87-181 8-89 (150)
54 TIGR03405 Phn_Fe-ADH phosphona 71.7 23 0.0005 37.4 9.5 102 76-189 24-147 (355)
55 cd08195 DHQS Dehydroquinate sy 69.5 16 0.00034 38.5 7.7 91 76-178 25-119 (345)
56 PRK09860 putative alcohol dehy 65.8 35 0.00076 36.5 9.5 126 53-191 5-153 (383)
57 cd08176 LPO Lactadehyde:propan 64.6 27 0.00058 37.2 8.3 48 143-191 86-150 (377)
58 TIGR01357 aroB 3-dehydroquinat 64.5 25 0.00054 36.9 8.0 91 76-178 21-115 (344)
59 cd08187 BDH Butanol dehydrogen 62.5 38 0.00082 36.2 9.0 125 53-190 3-150 (382)
60 cd08186 Fe-ADH8 Iron-containin 61.6 32 0.0007 36.7 8.3 103 76-190 27-149 (383)
61 PRK00002 aroB 3-dehydroquinate 60.6 32 0.0007 36.4 8.0 98 75-184 31-134 (358)
62 KOG4180 Predicted kinase [Gene 59.6 4.8 0.0001 42.1 1.4 71 143-224 106-180 (395)
63 TIGR02483 PFK_mixed phosphofru 59.3 28 0.0006 36.6 7.1 37 144-185 96-132 (324)
64 cd08172 GlyDH-like1 Glycerol d 59.2 61 0.0013 34.1 9.8 92 76-187 24-119 (347)
65 cd08181 PPD-like 1,3-propanedi 58.7 53 0.0012 34.7 9.2 47 143-190 84-146 (357)
66 PRK15138 aldehyde reductase; P 58.3 46 0.001 35.7 8.8 124 53-190 5-152 (387)
67 cd08170 GlyDH Glycerol dehydro 57.5 56 0.0012 34.3 9.1 96 76-190 23-123 (351)
68 TIGR02482 PFKA_ATP 6-phosphofr 54.7 47 0.001 34.6 7.8 39 144-186 93-131 (301)
69 TIGR02638 lactal_redase lactal 54.6 50 0.0011 35.2 8.3 125 53-190 3-152 (379)
70 cd08194 Fe-ADH6 Iron-containin 54.0 78 0.0017 33.7 9.6 99 76-187 24-141 (375)
71 PTZ00286 6-phospho-1-fructokin 53.9 14 0.00031 40.6 4.1 45 145-191 179-229 (459)
72 cd08550 GlyDH-like Glycerol_de 53.8 43 0.00094 35.2 7.6 41 143-187 78-120 (349)
73 cd08173 Gro1PDH Sn-glycerol-1- 53.3 59 0.0013 34.0 8.5 88 76-182 26-114 (339)
74 cd08185 Fe-ADH1 Iron-containin 52.9 91 0.002 33.2 9.9 104 76-191 26-153 (380)
75 cd08177 MAR Maleylacetate redu 52.8 66 0.0014 33.7 8.7 90 76-184 24-116 (337)
76 cd08551 Fe-ADH iron-containing 52.5 58 0.0012 34.5 8.3 47 143-190 81-144 (370)
77 PLN00180 NDF6 (NDH-dependent f 51.6 3.1 6.8E-05 38.8 -1.2 14 148-161 130-143 (180)
78 COG1454 EutG Alcohol dehydroge 51.6 60 0.0013 35.0 8.1 124 53-191 3-151 (377)
79 cd01836 FeeA_FeeB_like SGNH_hy 51.4 35 0.00077 31.8 5.9 60 144-211 43-102 (191)
80 PRK10624 L-1,2-propanediol oxi 51.2 65 0.0014 34.4 8.5 125 52-191 3-154 (382)
81 cd08171 GlyDH-like2 Glycerol d 50.1 60 0.0013 34.1 7.9 37 143-183 79-117 (345)
82 COG1691 NCAIR mutase (PurE)-re 48.1 27 0.00058 35.0 4.5 57 107-181 150-206 (254)
83 PRK09423 gldA glycerol dehydro 47.8 63 0.0014 34.2 7.7 118 52-189 3-129 (366)
84 cd08189 Fe-ADH5 Iron-containin 47.7 81 0.0018 33.5 8.5 102 76-190 27-148 (374)
85 cd04502 SGNH_hydrolase_like_7 47.6 21 0.00045 32.9 3.6 61 145-212 26-86 (171)
86 PRK15454 ethanol dehydrogenase 46.7 94 0.002 33.5 8.9 124 52-190 22-170 (395)
87 PLN02834 3-dehydroquinate synt 46.5 68 0.0015 35.1 7.8 92 76-179 101-198 (433)
88 cd08192 Fe-ADH7 Iron-containin 46.4 87 0.0019 33.2 8.5 44 143-187 82-146 (370)
89 PRK06830 diphosphate--fructose 45.2 22 0.00048 39.0 3.8 45 145-191 175-225 (443)
90 PF12219 End_tail_spike: Catal 44.0 11 0.00024 34.5 1.1 15 143-157 85-99 (160)
91 cd00763 Bacterial_PFK Phosphof 43.9 77 0.0017 33.3 7.4 37 144-185 94-130 (317)
92 cd08175 G1PDH Glycerol-1-phosp 43.7 68 0.0015 33.7 7.1 34 142-179 80-113 (348)
93 PLN02564 6-phosphofructokinase 43.5 30 0.00066 38.4 4.5 39 145-185 179-220 (484)
94 cd00363 PFK Phosphofructokinas 42.6 70 0.0015 33.8 7.0 42 144-185 94-136 (338)
95 cd08182 HEPD Hydroxyethylphosp 41.5 1.4E+02 0.0031 31.5 9.2 44 143-187 78-142 (367)
96 PRK14072 6-phosphofructokinase 40.2 78 0.0017 34.5 7.0 41 144-185 105-147 (416)
97 PF00465 Fe-ADH: Iron-containi 39.4 77 0.0017 33.5 6.8 100 77-191 23-144 (366)
98 cd08188 Fe-ADH4 Iron-containin 39.3 1.3E+02 0.0028 32.1 8.5 47 142-189 85-148 (377)
99 KOG2178 Predicted sugar kinase 39.0 70 0.0015 34.6 6.2 58 144-215 170-227 (409)
100 PRK00843 egsA NAD(P)-dependent 38.8 1.3E+02 0.0028 31.7 8.3 37 143-183 88-124 (350)
101 cd08178 AAD_C C-terminal alcoh 37.4 2E+02 0.0043 30.9 9.6 48 142-190 78-153 (398)
102 cd08196 DHQS-like1 Dehydroquin 37.3 1.9E+02 0.0041 30.7 9.2 91 76-178 20-110 (346)
103 PRK03202 6-phosphofructokinase 36.9 1E+02 0.0022 32.4 7.1 38 144-186 95-132 (320)
104 cd08174 G1PDH-like Glycerol-1- 36.4 2.2E+02 0.0048 29.6 9.5 36 143-182 76-111 (331)
105 PRK06203 aroB 3-dehydroquinate 35.8 1.9E+02 0.004 31.3 9.0 92 75-178 42-145 (389)
106 cd08184 Fe-ADH3 Iron-containin 35.6 1.9E+02 0.0041 30.7 8.9 47 143-190 82-145 (347)
107 cd08183 Fe-ADH2 Iron-containin 34.0 1.8E+02 0.0039 30.9 8.5 95 76-189 23-142 (374)
108 cd01831 Endoglucanase_E_like E 33.6 67 0.0014 29.5 4.6 49 143-212 45-93 (169)
109 PLN02884 6-phosphofructokinase 33.6 1E+02 0.0022 33.6 6.6 40 144-185 145-187 (411)
110 PRK06555 pyrophosphate--fructo 33.2 97 0.0021 33.7 6.3 40 144-185 114-156 (403)
111 cd08549 G1PDH_related Glycerol 32.9 1.3E+02 0.0029 31.4 7.2 32 143-178 81-112 (332)
112 PRK14071 6-phosphofructokinase 32.8 1.6E+02 0.0034 31.5 7.8 38 144-185 109-146 (360)
113 cd08198 DHQS-like2 Dehydroquin 29.5 2.9E+02 0.0063 29.7 9.1 34 144-179 101-134 (369)
114 cd02007 TPP_DXS Thiamine pyrop 28.6 92 0.002 30.1 4.8 67 143-209 97-176 (195)
115 cd01841 NnaC_like NnaC (CMP-Ne 27.5 56 0.0012 29.9 3.0 61 144-211 26-86 (174)
116 PLN03028 pyrophosphate--fructo 27.4 1.4E+02 0.003 34.4 6.5 74 145-226 176-258 (610)
117 TIGR02477 PFKA_PPi diphosphate 26.1 1.4E+02 0.003 33.8 6.2 40 145-186 164-206 (539)
118 cd08193 HVD 5-hydroxyvalerate 25.7 3.1E+02 0.0067 29.1 8.6 45 143-188 84-145 (376)
119 TIGR02478 6PF1K_euk 6-phosphof 25.6 1.8E+02 0.0038 34.4 7.1 41 145-185 481-523 (745)
120 cd01844 SGNH_hydrolase_like_6 25.0 1.5E+02 0.0032 27.4 5.4 58 144-213 34-91 (177)
121 PRK10586 putative oxidoreducta 24.9 3.3E+02 0.0071 29.0 8.5 39 143-185 87-127 (362)
122 COG1979 Uncharacterized oxidor 24.4 3.3E+02 0.0072 29.1 8.0 87 53-151 5-94 (384)
123 PRK07085 diphosphate--fructose 24.1 91 0.002 35.3 4.3 74 145-226 167-249 (555)
124 cd01840 SGNH_hydrolase_yrhL_li 24.0 1.9E+02 0.0041 26.1 5.8 51 147-210 26-77 (150)
125 PF00365 PFK: Phosphofructokin 23.3 60 0.0013 33.4 2.5 39 144-186 94-132 (282)
126 PRK13805 bifunctional acetalde 22.9 4.5E+02 0.0097 31.5 10.0 98 52-162 455-558 (862)
127 PTZ00287 6-phosphofructokinase 22.2 2E+02 0.0043 36.2 6.9 46 144-191 930-983 (1419)
128 cd08191 HHD 6-hydroxyhexanoate 22.2 4.2E+02 0.009 28.3 8.8 48 142-190 79-143 (386)
129 TIGR03590 PseG pseudaminic aci 22.2 4.5E+02 0.0098 26.6 8.7 35 135-178 234-268 (279)
130 cd01839 SGNH_arylesterase_like 21.9 1.2E+02 0.0026 28.8 4.2 40 169-212 78-117 (208)
131 PRK14021 bifunctional shikimat 21.5 3.6E+02 0.0078 30.4 8.4 42 143-186 270-313 (542)
132 TIGR01162 purE phosphoribosyla 20.7 4.5E+02 0.0097 24.9 7.5 77 87-181 6-87 (156)
133 cd01820 PAF_acetylesterase_lik 20.2 1.6E+02 0.0035 28.2 4.8 59 146-211 65-124 (214)
No 1
>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9e-76 Score=631.40 Aligned_cols=379 Identities=34% Similarity=0.607 Sum_probs=312.3
Q ss_pred cCccccccccccccCceeccCCccc--------------------------ccCCCCCCeEEEEEcCcCCCCChhhHHHH
Q 009691 44 ATPKSKILNNYYIPNYILVSGSEVQ--------------------------RSSLIPSCPVLVFINSKSGGQLGGKLLLT 97 (528)
Q Consensus 44 ~~~~~~~~~~~~ip~~~~~~~~~~~--------------------------~~~~~~~~pllVivNPkSGg~~g~~ll~~ 97 (528)
..+....+++.++|++++.+....+ .....+.+|++|||||||||++|..++.+
T Consensus 214 ~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PLlVfvNpKSGg~~G~~ll~~ 293 (634)
T KOG1169|consen 214 QECDLGELKDHILPPSTLRPARTARVASDHSGLPGEKSEEVTDAKKMQQLLVTDPPDWRPLLVFVNPKSGGQQGERLLRR 293 (634)
T ss_pred hhccChhhhhccCCceeeecccccccccccccccccccccccccccccccccCCCCCCcceEEEEecCCcccccHHHHHH
Confidence 3466788999999999888864431 23455679999999999999999999999
Q ss_pred HHHHhccCcEEEEeecC-chhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCC---CCCCE
Q 009691 98 YRSLLNENQVIDLGEKA-PDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLP---HSPPV 173 (528)
Q Consensus 98 ~~~~L~~~qV~dL~~~~-p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~~~---~~~pl 173 (528)
|+.+||+.|||||+..+ |..+|. +++.+ ..+||+||||||||+|||+.+.+++.. ..|||
T Consensus 294 f~~lLnp~QVfdl~~~~~p~~gL~-l~~~~---------------~~~riLVcGGDGTvGWVL~~i~~~n~~~~~~~PpV 357 (634)
T KOG1169|consen 294 FRYLLNPVQVFDLLKRGGPRPGLT-LFRDV---------------PDFRILVCGGDGTVGWVLGCIDKLNKQNAIPPPPV 357 (634)
T ss_pred HHHhcChhhEEecccCCCCchhHH-HHHhC---------------CcceEEEecCCCcchhhhhhHHHhhccccCCCCCe
Confidence 99999999999999874 888886 44443 256999999999999999999987643 48999
Q ss_pred EEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCCCCCCCCCCCCCcccccccccc
Q 009691 174 ATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVS 253 (528)
Q Consensus 174 giIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~r~~ 253 (528)
||+|+||||||||+|+||.+++|.+.. +.++|+.|..|.+.++|+|+|.+.+.... .. +.+++.-
T Consensus 358 AilPLGTGNDLsR~l~WGgg~~g~~~~-~~~iL~~i~~a~v~~lDrW~v~v~~~~~~-----~~-----~~~~~~~---- 422 (634)
T KOG1169|consen 358 AILPLGTGNDLSRVLRWGGGYPGEDRN-LIKILKDIEEAPVTKLDRWKVLVEPQSGE-----LV-----QYSLKPP---- 422 (634)
T ss_pred EEEecCCCCchHhhcCCCCCCCcchhh-HHHHHHhhhhccceecceeeEEeeccccc-----cc-----cccccCC----
Confidence 999999999999999999999997644 99999999999999999999998765321 00 0111100
Q ss_pred cccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHHHhhhcccccccCCCCCCCcceE
Q 009691 254 QKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMA 333 (528)
Q Consensus 254 ~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~glk~~~~~~~l~~~~~k~l~~~i 333 (528)
..+.+.+...|+||||||+||+|+|+||..|+++|++|+||++||++|+.+|++. ||+++ ++++..++
T Consensus 423 ------~~~~~~~~~imnNYFSIGvDA~Ia~~FH~~Re~~PekF~Sr~~NKl~Yf~~G~q~-~f~~~-----ck~~~~~i 490 (634)
T KOG1169|consen 423 ------EKGDPVPYGIMNNYFSIGVDAQIAYGFHNMREKNPEKFNSRMKNKLWYFEFGTQE-TFAAR-----CKNLHLHI 490 (634)
T ss_pred ------CcCCCCCeeeEeeeeeecccHHHHHHHHHHhhhChHhhcchhhceeeeeeecchh-hHHHh-----hcCCccce
Confidence 0111233357999999999999999999999999999999999999999999865 77655 45654456
Q ss_pred EEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCCCcEEEEEecchhHHHHHHhcCC
Q 009691 334 KVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNG 413 (528)
Q Consensus 334 ~l~vd~~dg~~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~LEVv~v~~~~~~~~ll~~~~ 413 (528)
++.+ +++++.+++|.++++|+++|++|||||.++|++.++.+...+.+.....|||++|||++++.||++.+++++.
T Consensus 491 ~i~~---~~d~~dl~~p~sleGIv~LNIpS~ggG~nlWg~~~~~~~~~~~~~~~d~~dgliEvvgv~~~~h~~~~qvgL~ 567 (634)
T KOG1169|consen 491 KIEL---DGDGEDLELPKSLEGIVVLNIPSWGGGSNLWGNSNKSKGNFRGFSEADDDDGLIEVVGVQDSWHLLQEQVGLE 567 (634)
T ss_pred EEEE---cccceEccCCCCceeEEEEcccccccCcccccccCccccccccccccCCCcCeEEEEEeccchhhhhhhhccc
Confidence 6666 5666689999999999999999999999999987766555566677888899999999999999999999999
Q ss_pred CcceEEE---ecE-EEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEEeCceeeEEeCCCCCCCc
Q 009691 414 HGTRLAQ---ANR-VRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLATPCCRSRS 478 (528)
Q Consensus 414 ~~~rl~Q---~~~-V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~~~~v~mL~~~~~~~~~ 478 (528)
+++|++| .+. ++|...+ ..|||||||||.|+ |++|+|+|++|+.||++..+....
T Consensus 568 ~a~rigQ~~a~~~~~~i~~~k----~~PMQiDGEPW~Q~------p~tI~Ithk~q~~mL~~~~~~~~~ 626 (634)
T KOG1169|consen 568 SALRIGQRLAQCSERVIGTKK----TFPMQIDGEPWMQP------PCTIEITHKNQAPMLMKAAKEKRR 626 (634)
T ss_pred hhhHHHHHhhccEEEEecccc----CcceecCCccccCC------CceEEEEecchHhhhhcccccccC
Confidence 9999996 333 4466666 69999999999997 799999999999999988764443
No 2
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8e-66 Score=536.61 Aligned_cols=337 Identities=35% Similarity=0.609 Sum_probs=281.8
Q ss_pred CCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009691 72 LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 151 (528)
Q Consensus 72 ~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GG 151 (528)
..+++|++|||||||||++|.++++.|..+|||.|||||+..+|..+|+ +|+++. .+||++|||
T Consensus 362 SplmkPLLVFVNPKSGGNqGsK~lq~f~WyLNPRQVFDlsq~GPK~aLE-myRKV~---------------nLRILaCGG 425 (1004)
T KOG0782|consen 362 SPLMKPLLVFVNPKSGGNQGSKALQTFCWYLNPRQVFDLSQLGPKFALE-MYRKVV---------------NLRILACGG 425 (1004)
T ss_pred CCCCCceEEEecCCCCCcchHHHHHHHHHhcChhhheehhccCcHHHHH-HHHhcc---------------ceEEEEecC
Confidence 4467999999999999999999999999999999999999999999998 777753 589999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCC
Q 009691 152 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 231 (528)
Q Consensus 152 DGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~ 231 (528)
||||+|+|+.|+++++...||+||+||||||||||.|+||.+| ..+.+.++|+.|.++.++.+|+|.+.+.+..
T Consensus 426 DGTVGWiLStLD~L~l~p~PPvailPLGTGNDLARtlnWGGgy---tDEPvSkil~~ve~gtvVqLDRW~lhvEpNp--- 499 (1004)
T KOG0782|consen 426 DGTVGWILSTLDNLNLPPYPPVAILPLGTGNDLARTLNWGGGY---TDEPVSKILQAVEHGTVVQLDRWRLHVEPNP--- 499 (1004)
T ss_pred CCceeehhhhhhhcCCCCCCCeeEeecCCcchHHHhcccCCCc---CcchHHHHHHHHhcCcEEeeeeeeecccCCC---
Confidence 9999999999999999999999999999999999999999754 3468999999999999999999999876432
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHH
Q 009691 232 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 311 (528)
Q Consensus 232 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 311 (528)
+|.+ -|+..+ . .+.+.. ..|+||||+||||.|+++||++|+.+|++|+||++||+.|+-.+
T Consensus 500 -~~~p---Ee~ddG---~-----~~~LPL-------~VfnNYFSlGfDAHVtLeFHeSReANPekfNSRfrNkmfYaG~a 560 (1004)
T KOG0782|consen 500 -SCNP---EEEDDG---M-----QSALPL-------TVFNNYFSLGFDAHVTLEFHESREANPEKFNSRFRNKMFYAGLA 560 (1004)
T ss_pred -CCCh---hhhccc---c-----hhccch-------hHhhccccccccceEEEEeccccccCHHHHHHHHhhhhhhcchh
Confidence 1211 000000 0 001111 25999999999999999999999999999999999999999999
Q ss_pred HhhhcccccccCCCCCCCcceEEEEEEecCCc---EEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCC
Q 009691 312 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQ---WEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPY 388 (528)
Q Consensus 312 lk~~~~~~~l~~~~~k~l~~~i~l~vd~~dg~---~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~ 388 (528)
+.. ++.+++|++.++++|.+ ||. .+.-++ ....|+++|+|+|.+|..+|++|.+ .-+|+++.
T Consensus 561 fsD------fl~rSskDL~khi~vvC---DG~DlTPkIqeL--K~qCivFlNIprYcaGTmPWG~pgd----hhDfePqr 625 (1004)
T KOG0782|consen 561 FSD------FLKRSSKDLCKHITVVC---DGVDLTPKIQEL--KLQCIVFLNIPRYCAGTMPWGEPGD----HHDFEPQR 625 (1004)
T ss_pred HHH------HHhhhhHHhhhheEEEe---cCccCChhhhhc--ccceEEEecchhhhcCccCCCCCCc----cccCCccc
Confidence 999 77788899999998888 553 111122 4579999999999999999998743 24688999
Q ss_pred cCCCcEEEEEecchhHHHHHHhcCCCcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEEeCceeeE
Q 009691 389 VDDGLLEIVGFRDAWHGLVLLAPNGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNM 468 (528)
Q Consensus 389 ~dDG~LEVv~v~~~~~~~~ll~~~~~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~~~~v~m 468 (528)
.|||++||++|+-.+ ++.++ ..+++-|++||++|++.+.+ .+||||||||.... |..|+|...+|++|
T Consensus 626 hdDGyvEViGFTmas-LAALQ-vGGhGERl~QCreV~l~T~K----aIPmQVDGEPC~LA------ps~Iri~lrnqa~M 693 (1004)
T KOG0782|consen 626 HDDGYVEVIGFTMAS-LAALQ-VGGHGERLAQCREVRLITNK----AIPMQVDGEPCLLA------PSIIRIGLRNQAPM 693 (1004)
T ss_pred cCCceEEEEeeeHHH-HHHHh-hcCcchhhhhceeEEEEecc----ccceeecCcchhcc------hhheEEeecccchH
Confidence 999999999998764 33333 35789999999999998887 69999999999875 78999999999999
Q ss_pred EeCCCCCC
Q 009691 469 LATPCCRS 476 (528)
Q Consensus 469 L~~~~~~~ 476 (528)
+.+..-+.
T Consensus 694 vqk~KRR~ 701 (1004)
T KOG0782|consen 694 VQKEKRRG 701 (1004)
T ss_pred HHHHhhcc
Confidence 98764333
No 3
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=100.00 E-value=6.8e-63 Score=530.56 Aligned_cols=419 Identities=30% Similarity=0.474 Sum_probs=323.2
Q ss_pred ccccccccccccCceeccC-Cc------ccccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhH
Q 009691 46 PKSKILNNYYIPNYILVSG-SE------VQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKV 118 (528)
Q Consensus 46 ~~~~~~~~~~ip~~~~~~~-~~------~~~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~ 118 (528)
|..+.-+--.|||-.+... .. ...+...+.+|++||+|.|||..+|.+++++|+++||+.|||||..++|.-+
T Consensus 158 cs~~~~~~svi~ptal~~~~~dg~~v~~~~a~~~~~~spllv~insksgd~qg~~~lrkfkq~lnp~qVfdll~~gp~~g 237 (1099)
T KOG1170|consen 158 CSLGHSALSVIPPTALKEVTPDGTAVFWEEAYGGPCGSPLLVFINSKSGDSQGQRFLRKFKQILNPIQVFDLIAGGPDFG 237 (1099)
T ss_pred cccccccccccChhhhcccCCCcceeehhhhcCCCCCCceeEeecccCCCchhHHHHHhhhhhcCHHHHHHHHccCcchh
Confidence 4344444556666643322 11 1244456779999999999999999999999999999999999998899988
Q ss_pred HHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCCh
Q 009691 119 LHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTD 198 (528)
Q Consensus 119 l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~ 198 (528)
|+ ++..+ ..+||+||||||+|+||+..+..++++.+..+|++|+||||||||+||||..++.+
T Consensus 238 L~-~f~~~---------------d~friLvcggdGsv~wvls~~ds~~lh~kcql~vlplgtgndlarvlgwg~a~~dd- 300 (1099)
T KOG1170|consen 238 LT-FFSHF---------------ESFRILVCGGDGSVGWVLSAIDRLNLHSKCQLAVLPLGTGNDLARVLGWGHAFYDD- 300 (1099)
T ss_pred hh-hhhcc---------------cceEEEEecCCCCCcchHHHHHhccchhhcccccccCCChHHHHHHhcccccCchh-
Confidence 86 66654 36899999999999999999999999999999999999999999999999765442
Q ss_pred hHHHHHHHHHHHcCCeeeEeEEEEeeeecCC-------------------------------------------------
Q 009691 199 QQAVLSFLEQVKNAKEMQIDSWHILMRMKAP------------------------------------------------- 229 (528)
Q Consensus 199 ~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~------------------------------------------------- 229 (528)
.-+.++++.+.++.++++|+|.|......-
T Consensus 301 -t~~p~il~~~eRastkmldrwsvm~~e~~~~~~~~~~~~~v~~~~~~~e~~~i~~~e~q~~t~l~kiL~s~~~t~~i~~ 379 (1099)
T KOG1170|consen 301 -TLLPQILRTMERASTKMLDRWSVMAIEGPQADAVRRYIEKVETFLEAEETWDIIHAENQLATTLRKILHSVSHTYSILE 379 (1099)
T ss_pred -hccHHHHHHHHhhhhhhhhcchhhhhhccccchHHHHHHHHHHhcccchhhhhhhhhhhhhhhHHhhhccccchhhhhh
Confidence 345589999999999999999986210000
Q ss_pred -------------------------------------------------------------------------------C
Q 009691 230 -------------------------------------------------------------------------------K 230 (528)
Q Consensus 230 -------------------------------------------------------------------------------~ 230 (528)
.
T Consensus 380 ~~~~c~~~~~f~~k~~ka~~s~~~nl~~s~a~~~k~spa~e~~~~~~~~~~~es~assv~~~~t~~~~~~l~~gt~~~~~ 459 (1099)
T KOG1170|consen 380 NNTLCTKREDFVKKRSKATPSVLSNLSSSSACSPKCSPAGEDLPQLFEILHSESSASSVLTALSARTYDELEIGTVHPPT 459 (1099)
T ss_pred hccccchHHHHHHHHhhcccchhccCCchhhccccCCccccchhHHHHHhhhhhhhhhccCCCchhhhhhhhhccccCCC
Confidence 0
Q ss_pred --------------------------------------------CCCCCC-----------------------CCC---C
Q 009691 231 --------------------------------------------EGSFDP-----------------------IAP---L 240 (528)
Q Consensus 231 --------------------------------------------~g~~~~-----------------------~~~---~ 240 (528)
++.+|+ +.. .
T Consensus 460 ~g~t~~p~~~~~~~~~~~i~~~r~eL~~kans~kks~s~~i~~te~a~De~~~~~~~~L~eseekm~~ks~~~~~~se~d 539 (1099)
T KOG1170|consen 460 PGATREPSTAYDDDEENEIVENRKELDQKANSLKKSVSTIIDITEGAPDEPRIYSDTTLNESEEKMKSKSLHPICSSEDD 539 (1099)
T ss_pred CCccCCCCccccchhhhhhcccHHHHhHHhhhhhccHHHhHHHhhcCCCcccccchhhhhhhHhhhhhccCCCcccCccc
Confidence 000000 000 0
Q ss_pred CCCcc---cccc----cc------------------cccccccc--------------cCCcc-e----e--ccceeEEe
Q 009691 241 ELPHS---LHAF----HR------------------VSQKDKLN--------------VEGHH-T----F--RGGFWNYF 274 (528)
Q Consensus 241 ~~~~~---~~~~----~r------------------~~~~~~~~--------------~~~~~-~----~--~~~F~Nyf 274 (528)
+-+|+ +... .| ....|.++ +.+.| . | +..|+|||
T Consensus 540 ~~~~~~s~~~~~~spl~rl~s~~~ls~ggs~~s~~~~~d~dtl~al~~~~~~p~~d~g~seS~L~sa~~y~EkCVMNNYF 619 (1099)
T KOG1170|consen 540 MKQHSDSSLYADYSPLERLSSGGGLSAGGSTLSPARASDSDTLSALKERKRTPGSDLGLSESHLRSAGQYKEKCVMNNYF 619 (1099)
T ss_pred cccccchhhccccchhhccCCCCCcccCccccCcccccccchhhhhhccccCCcccccccccccccccchhhhhhhcccc
Confidence 00000 0000 00 00001111 00110 0 1 24699999
Q ss_pred ecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHHHhhhcccccccCCCCCCCcceEEEEEEecCCcEEEEEecccee
Q 009691 275 SMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIR 354 (528)
Q Consensus 275 sIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~glk~~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~lp~~i~ 354 (528)
|||+||.|++.||..|++||+++.||.+|++||++.|.|+ |+|+.|||+.++++|++ ||+ ++.+| +++
T Consensus 620 GIGlDAKISLDFhnKReEhPeKcrSR~kn~MWYGvLGtKe------LLhrTyrnLEQRV~LEC---DG~--~i~lP-~LQ 687 (1099)
T KOG1170|consen 620 GIGLDAKISLDFHNKREEHPEKCRSRSKNFMWYGVLGTKE------LLHRTYRNLEQRVKLEC---DGV--PIDLP-SLQ 687 (1099)
T ss_pred ccccceeEeeecccccccChHHHhHHhhhcchhhhcchHH------HHHHHHHhHHHHeeeec---CCc--ccCCc-ccc
Confidence 9999999999999999999999999999999999999999 99999999999888888 888 89999 999
Q ss_pred EEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCCCcEEEEEecchhHHHHHHhcCCCcceEEEecEEEEEEccCCCc
Q 009691 355 SIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNGHGTRLAQANRVRFEFEKGAAD 434 (528)
Q Consensus 355 ~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~LEVv~v~~~~~~~~ll~~~~~~~rl~Q~~~V~I~~~~~~~~ 434 (528)
+|||+|||||.||.|+|+..+ .++.|.++++||+.||||++-++.+++...+.+.+++||+||++|+|.+.. ++
T Consensus 688 GIviLNIpSyaGGtNFWGsnk----~dd~f~apSfDDriLEVVAvFGsvqMA~SRvI~LqhHRIAQCr~V~I~IlG--DE 761 (1099)
T KOG1170|consen 688 GIVILNIPSYAGGTNFWGSNK----DDDEFTAPSFDDRILEVVAVFGSVQMATSRVIRLQHHRIAQCRHVRIVILG--DE 761 (1099)
T ss_pred eeEEEecccccCcccccCCCC----CCCcccCCCcccceeEEeeeehhHHHHHHHHHHhhhhhhhhceEEEEEEec--CC
Confidence 999999999999999999753 468999999999999999999998888777677788999999999999987 56
Q ss_pred ceeeeecCCcCCCCCCCCCccEEEEEEeCceeeEEeCC----------CCCCCcccCCCCCCCCCCcccCccccCcchhH
Q 009691 435 HTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLATP----------CCRSRSINDAPSPASIIDEDCESIEDESSEDW 504 (528)
Q Consensus 435 ~i~vqvDGE~~~~~~~~~~~p~~v~I~~~~~v~mL~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (528)
++|||||||+|.|| |..|+|.|++.++||+++ +-|++.....++|.... .+..++||.
T Consensus 762 ~IPVQvDGEaWlQP------PG~irIvHKNRaQmL~Rnr~fE~tLKsWeeKq~~~s~~~q~~~~~---~e~as~ed~--- 829 (1099)
T KOG1170|consen 762 GIPVQVDGEAWLQP------PGIIRIVHKNRAQMLARNRVFEATLKSWEEKQEKASTTPQPSTPT---AEGASTEDI--- 829 (1099)
T ss_pred CCceeecCccccCC------CceeeeehhhhHHHhhcchHHHHHHHHHHHHhhcccCCCCCCCcc---cccCChhHH---
Confidence 89999999999998 899999999999999988 45666666666665522 345556665
Q ss_pred HHHhhccc
Q 009691 505 EERRKFGA 512 (528)
Q Consensus 505 ~~~~~f~~ 512 (528)
.+...|+.
T Consensus 830 ~q~~~~~~ 837 (1099)
T KOG1170|consen 830 IQMLTRAR 837 (1099)
T ss_pred HHHHHHHH
Confidence 45555554
No 4
>PRK13057 putative lipid kinase; Reviewed
Probab=100.00 E-value=1.3e-41 Score=346.48 Aligned_cols=274 Identities=20% Similarity=0.256 Sum_probs=210.5
Q ss_pred EEEEcCcCCCCChhhHHHHHHHHhccCcE-EEE-eecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 009691 79 LVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL-GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 156 (528)
Q Consensus 79 lVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL-~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~ 156 (528)
+||+||.||+++ +.+..+++.|..... +.+ ....++++.+ +.+.+. .+...|||+|||||||
T Consensus 1 ~~I~Np~sg~~~--~~~~~i~~~l~~~g~~~~~~~t~~~~~a~~-~~~~~~-------------~~~d~iiv~GGDGTv~ 64 (287)
T PRK13057 1 LLLVNRHARSGR--AALAAARAALEAAGLELVEPPAEDPDDLSE-VIEAYA-------------DGVDLVIVGGGDGTLN 64 (287)
T ss_pred CEEECCCCCCcc--hhHHHHHHHHHHcCCeEEEEecCCHHHHHH-HHHHHH-------------cCCCEEEEECchHHHH
Confidence 479999999766 467888888875432 332 3334555443 222211 2346899999999999
Q ss_pred HHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCCCCCC
Q 009691 157 WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDP 236 (528)
Q Consensus 157 ~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~g~~~~ 236 (528)
+|+++|.. .++|||+||+||||||||+||++. ++.++++.|..++++.+|+++++-
T Consensus 65 ~v~~~l~~----~~~~lgiiP~GT~Ndfar~Lg~~~--------~~~~a~~~i~~~~~~~vD~g~~~~------------ 120 (287)
T PRK13057 65 AAAPALVE----TGLPLGILPLGTANDLARTLGIPL--------DLEAAARVIATGQVRRIDLGWVNG------------ 120 (287)
T ss_pred HHHHHHhc----CCCcEEEECCCCccHHHHHcCCCC--------CHHHHHHHHHcCCeEEeeEEEECC------------
Confidence 99999975 468999999999999999999985 578889999999999999998740
Q ss_pred CCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHHHhhhc
Q 009691 237 IAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGW 316 (528)
Q Consensus 237 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~glk~~~ 316 (528)
++|+|++|+|+||.|++.++..++ +..++++|++.+++.
T Consensus 121 -------------------------------~~f~n~~g~G~da~v~~~~~~~~k--------~~~G~~aY~~~~~~~-- 159 (287)
T PRK13057 121 -------------------------------HYFFNVASLGLSAELARRLTKELK--------RRWGTLGYAIAALRV-- 159 (287)
T ss_pred -------------------------------EEEEEEEecCccHHHHHHhhHHhh--------ccCChhHHHHHHHHH--
Confidence 379999999999999998875543 356899999999998
Q ss_pred ccccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCCCcEEE
Q 009691 317 FLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEI 396 (528)
Q Consensus 317 ~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~LEV 396 (528)
+++ ++.+ .+++++ ||+ ..+. +...++|+|+++||||+.++|. +.++||+|||
T Consensus 160 ----l~~--~~~~--~~~l~~---d~~--~~~~--~~~~~~v~N~~~~gg~~~~~p~-------------a~~~DG~ldv 211 (287)
T PRK13057 160 ----LRR--SRPF--TAEIEH---DGR--TERV--KTLQVAVGNGRYYGGGMTVAHD-------------ATIDDGRLDL 211 (287)
T ss_pred ----Hhh--CCCe--EEEEEE---CCE--EEEE--EEEEEEEecCcccCCCcccCCC-------------CCCCCceEEE
Confidence 643 2332 456666 665 2333 5567889999999999999874 7899999999
Q ss_pred EEecchhH--HHHHH--hc-----CCCcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEEeCceee
Q 009691 397 VGFRDAWH--GLVLL--AP-----NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVN 467 (528)
Q Consensus 397 v~v~~~~~--~~~ll--~~-----~~~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~~~~v~ 467 (528)
+.++.... ++.++ +. ..+.++..++++++|++.+ ++++|+|||.+... |++|+|.+ +.++
T Consensus 212 ~~v~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~~~i~~~~----~~~~~~DGE~~~~~------p~~i~v~p-~al~ 280 (287)
T PRK13057 212 YSLEVAHWWRLLALLPALRRGRHGEWPDVRAFRTTELELRTRK----PRPINTDGELTTYT------PAHFRVLP-KALR 280 (287)
T ss_pred EEecCCCHHHHHHHHHHHhcCCccCCCcEEEEEeeEEEEEeCC----CcEEeeCCccCCCC------CEEEEEEC-CeEE
Confidence 99987642 22221 11 2346889999999999876 68999999999764 79999996 5999
Q ss_pred EEeCC
Q 009691 468 MLATP 472 (528)
Q Consensus 468 mL~~~ 472 (528)
++++.
T Consensus 281 v~~p~ 285 (287)
T PRK13057 281 VLAPP 285 (287)
T ss_pred EEcCC
Confidence 99865
No 5
>PRK13059 putative lipid kinase; Reviewed
Probab=100.00 E-value=5.2e-41 Score=343.50 Aligned_cols=278 Identities=20% Similarity=0.200 Sum_probs=209.4
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCc--E--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 151 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~q--V--~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GG 151 (528)
++++||+||.||++++.+.+..+++.|.... + +..+ ...+ .+...+.. .+....|||+||
T Consensus 2 ~~~~~I~NP~aG~g~~~~~~~~i~~~l~~~g~~~~~~~~~--~~~~-~~~~~~~~-------------~~~~d~vi~~GG 65 (295)
T PRK13059 2 KKVKFIYNPYSGENAIISELDKVIRIHQEKGYLVVPYRIS--LEYD-LKNAFKDI-------------DESYKYILIAGG 65 (295)
T ss_pred cEEEEEECCcccchhHHHHHHHHHHHHHHCCcEEEEEEcc--Ccch-HHHHHHHh-------------hcCCCEEEEECC
Confidence 5789999999999988888888888886543 2 2222 1222 22121111 123457999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCC
Q 009691 152 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 231 (528)
Q Consensus 152 DGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~ 231 (528)
|||||+|+|+|.+. ..++||||||+||||||||+||++. ++.++++.|..++++++|+++++-
T Consensus 66 DGTv~evv~gl~~~--~~~~~lgviP~GTgNdfAr~lgi~~--------~~~~a~~~i~~g~~~~vDlg~v~~------- 128 (295)
T PRK13059 66 DGTVDNVVNAMKKL--NIDLPIGILPVGTANDFAKFLGMPT--------DIGEACEQILKSKPKKVDLGKIND------- 128 (295)
T ss_pred ccHHHHHHHHHHhc--CCCCcEEEECCCCHhHHHHHhCCCC--------CHHHHHHHHHhCCcEEeeEEEECC-------
Confidence 99999999999753 2468999999999999999999985 688899999999999999998740
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHH
Q 009691 232 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 311 (528)
Q Consensus 232 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 311 (528)
++|+|++|+|+||+|++.++...+ +.+++++|+..+
T Consensus 129 ------------------------------------~~f~n~~~~G~~a~v~~~~~~~~k--------~~~G~~aY~~~~ 164 (295)
T PRK13059 129 ------------------------------------KYFINVASTGLFTDVSQKTDVNLK--------NTIGKLAYYLKG 164 (295)
T ss_pred ------------------------------------EEEEEEEeeeechhhhhhccHHHh--------hCcchHHHHHHH
Confidence 379999999999999988764322 456899999999
Q ss_pred HhhhcccccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCC
Q 009691 312 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 391 (528)
Q Consensus 312 lk~~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dD 391 (528)
++. ++. ++.+ .+++++ ||+ .++. +...++|+|.+++|| +.++|. ++++|
T Consensus 165 ~~~------l~~--~~~~--~~~i~~---d~~--~~~~--~~~~~~v~N~~~~Gg-~~~~p~-------------a~~~D 213 (295)
T PRK13059 165 LEE------LPN--FRKL--KVKVTS---EEV--NFDG--DMYLMLVFNGQTAGN-FNLAYK-------------AEVDD 213 (295)
T ss_pred HHH------Hhc--CCCe--eEEEEE---CCE--EEEe--eEEEEEEEcCccccC-cccCCc-------------ccCCC
Confidence 998 542 2332 456666 565 3332 567788999998874 677763 78999
Q ss_pred CcEEEEEecchhH--HHHHH----hc---CCCc-ceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEE
Q 009691 392 GLLEIVGFRDAWH--GLVLL----AP---NGHG-TRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEIS 461 (528)
Q Consensus 392 G~LEVv~v~~~~~--~~~ll----~~---~~~~-~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~ 461 (528)
|+|||+++++... ++.++ .+ ..+. +++.++++++|+..+ ++++|+|||+.... |++|++.
T Consensus 214 G~Ldv~i~~~~~~~~~l~~~~~~~~G~~~~~~~~v~~~~~~~i~i~~~~----~~~~~~DGE~~~~~------p~~i~v~ 283 (295)
T PRK13059 214 GLLDVIIIKACPIIDLIPLFIKVLKGEHLEDVNGLIYFKTDKLEIESNE----EIVTDIDGERGPDF------PLNIECI 283 (295)
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHcCCccCCCccEEEEEeeEEEEEeCC----CceEEeCCCcCCCC------cEEEEEe
Confidence 9999999998743 22221 11 1234 788899999999875 69999999998764 8999999
Q ss_pred eCceeeEEeCC
Q 009691 462 HLRQVNMLATP 472 (528)
Q Consensus 462 ~~~~v~mL~~~ 472 (528)
+ ++++++++.
T Consensus 284 p-~al~v~~p~ 293 (295)
T PRK13059 284 K-GGLKVLGIL 293 (295)
T ss_pred c-CeeEEEecC
Confidence 6 599999964
No 6
>PRK11914 diacylglycerol kinase; Reviewed
Probab=100.00 E-value=1.8e-40 Score=340.74 Aligned_cols=287 Identities=20% Similarity=0.158 Sum_probs=215.2
Q ss_pred CCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EE-EeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009691 74 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-ID-LGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 151 (528)
Q Consensus 74 ~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~d-L~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GG 151 (528)
..++++||+||.||++++.+.+..+.+.|..... +. +....++++.+ +.+... ..+...|||+||
T Consensus 7 ~~~~~~iI~NP~sG~g~~~~~~~~~~~~l~~~g~~~~~~~t~~~~~~~~-~a~~~~------------~~~~d~vvv~GG 73 (306)
T PRK11914 7 EIGKVTVLTNPLSGHGAAPHAAERAIARLHHRGVDVVEIVGTDAHDARH-LVAAAL------------AKGTDALVVVGG 73 (306)
T ss_pred CCceEEEEECCCCCCCcHHHHHHHHHHHHHHcCCeEEEEEeCCHHHHHH-HHHHHH------------hcCCCEEEEECC
Confidence 3478999999999999998889888888865432 22 22234555544 222211 023467999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCC
Q 009691 152 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 231 (528)
Q Consensus 152 DGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~ 231 (528)
|||||+|++++.. .++|||+||+||||||||+||++. .++.++++.+.+++++++|+++|+...
T Consensus 74 DGTi~evv~~l~~----~~~~lgiiP~GT~NdfAr~lg~~~-------~~~~~a~~~i~~g~~~~iDlg~v~~~~----- 137 (306)
T PRK11914 74 DGVISNALQVLAG----TDIPLGIIPAGTGNDHAREFGIPT-------GDPEAAADVIVDGWTETVDLGRIQDDD----- 137 (306)
T ss_pred chHHHHHhHHhcc----CCCcEEEEeCCCcchhHHHcCCCC-------CCHHHHHHHHHcCCceEEEEEEEecCC-----
Confidence 9999999999964 568999999999999999999984 147788889999999999999986210
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHH
Q 009691 232 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 311 (528)
Q Consensus 232 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 311 (528)
+. .++|+|++|+|+||.|+...++.|. ..++++|++.+
T Consensus 138 ------------------------------~~---~~~f~n~~~~G~~a~v~~~~~~~k~---------~~G~~aY~~~~ 175 (306)
T PRK11914 138 ------------------------------GI---VKWFGTVAATGFDSLVTDRANRMRW---------PHGRMRYNLAM 175 (306)
T ss_pred ------------------------------CC---cEEEEEEEeeehHHHHHHHHHhccc---------cCCchhhHHHH
Confidence 00 1379999999999999988764332 24889999999
Q ss_pred HhhhcccccccCCCCCCCcceEEEEEEecCC-cEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcC
Q 009691 312 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQG-QWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVD 390 (528)
Q Consensus 312 lk~~~~~~~l~~~~~k~l~~~i~l~vd~~dg-~~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~d 390 (528)
++. +++ .+++ .++|++ || + ..+. ++..++|+|+++||||+.++|. +.++
T Consensus 176 l~~------l~~--~~~~--~~~i~~---dg~~--~~~~--~~~~~~v~N~~~~GG~~~~~p~-------------a~~~ 225 (306)
T PRK11914 176 LAE------LSK--LRPL--PFRLVL---DGTE--EIVT--DLTLAAFGNTRSYGGGMLICPN-------------ADHT 225 (306)
T ss_pred HHH------HHh--cCCC--cEEEEE---eCCe--EEEe--eEEEEEEeCcccccCCceeCCC-------------CcCC
Confidence 998 543 2332 467777 45 3 2332 6678889999999999999874 7899
Q ss_pred CCcEEEEEecchhH--HHHHH--hcC-----CCcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEE
Q 009691 391 DGLLEIVGFRDAWH--GLVLL--APN-----GHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEIS 461 (528)
Q Consensus 391 DG~LEVv~v~~~~~--~~~ll--~~~-----~~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~ 461 (528)
||+|||+.++..+. ++.++ +.. .+.+++.++++|+|+.. ++++++|||+.... |++|++.
T Consensus 226 DG~ldv~~v~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~i~i~~~-----~~~~~~DGE~~~~~------p~~i~v~ 294 (306)
T PRK11914 226 DGLLDITMVQSASRTRLLRLFPTVFKGTHVELDEVSTARAKTVHVECP-----GINAYADGDFACPL------PAEISAV 294 (306)
T ss_pred CCcEEEEEEecCCHHHHHHHHHHhcCCcccCCCcEEEEEeEEEEEEcC-----CcceecCCCcCCCC------ceEEEEE
Confidence 99999999997643 22222 111 23578889999999875 37899999998753 7999999
Q ss_pred eCceeeEEeCCC
Q 009691 462 HLRQVNMLATPC 473 (528)
Q Consensus 462 ~~~~v~mL~~~~ 473 (528)
+ +.++++++.+
T Consensus 295 p-~al~v~vp~~ 305 (306)
T PRK11914 295 P-GALQILRPRP 305 (306)
T ss_pred c-CeEEEECCCC
Confidence 6 5899999653
No 7
>TIGR03702 lip_kinase_YegS lipid kinase YegS. Members of this protein family are designated YegS, an apparent lipid kinase family in the Proteobacteria. Bakali, et al. report phosphatidylglycerol kinase activity for the member from Escherichia coli, but refrain from calling that activity synonymous with its biological role. Note that a broader, subfamily-type model (TIGR00147), includes this family but also multiple paralogs in some species and varied functions.
Probab=100.00 E-value=1.4e-40 Score=339.96 Aligned_cols=282 Identities=16% Similarity=0.142 Sum_probs=204.6
Q ss_pred eEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEE-eecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 009691 77 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL-GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 154 (528)
Q Consensus 77 pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL-~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGT 154 (528)
.+++|+||+||..+ .+..+.+.|....+ +.+ ....++++.+ +.+... .++...|||+|||||
T Consensus 1 ~~~~I~N~~~~~~~---~~~~~~~~l~~~g~~~~v~~t~~~~~a~~-~a~~~~------------~~~~d~vv~~GGDGT 64 (293)
T TIGR03702 1 KALLILNGKQADNE---DVREAVGDLRDEGIQLHVRVTWEKGDAQR-YVAEAL------------ALGVSTVIAGGGDGT 64 (293)
T ss_pred CEEEEEeCCccchh---HHHHHHHHHHHCCCeEEEEEecCCCCHHH-HHHHHH------------HcCCCEEEEEcCChH
Confidence 37899999987332 44455555654432 322 2234566544 322211 123457999999999
Q ss_pred HHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCCCC
Q 009691 155 ASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSF 234 (528)
Q Consensus 155 V~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~g~~ 234 (528)
||+|+|+|.+.....++|||+||+||||||||+||++. ++.++++.+..++++++|+++++-
T Consensus 65 i~ev~ngl~~~~~~~~~~lgiiP~GTgNdfAr~l~ip~--------~~~~a~~~i~~g~~~~iDlg~v~~---------- 126 (293)
T TIGR03702 65 LREVATALAQIRDDAAPALGLLPLGTANDFATAAGIPL--------EPAKALKLALNGAAQPIDLARVNG---------- 126 (293)
T ss_pred HHHHHHHHHhhCCCCCCcEEEEcCCchhHHHHhcCCCC--------CHHHHHHHHHhCCceeeeEEEECC----------
Confidence 99999999753222457899999999999999999985 577889999999999999998740
Q ss_pred CCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHHHhh
Q 009691 235 DPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQ 314 (528)
Q Consensus 235 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~glk~ 314 (528)
.++|+|.+|+||||+|+..++...+ +..++++|+..+++.
T Consensus 127 --------------------------------~~~f~n~~~~G~da~v~~~~~~~~k--------~~~G~~aY~~~~l~~ 166 (293)
T TIGR03702 127 --------------------------------KHYFLNMATGGFGTRVTTETSEKLK--------KALGGAAYLITGLTR 166 (293)
T ss_pred --------------------------------ccEEEEEeecccchHhhhhhhHHHH--------hccchHHHHHHHHHH
Confidence 0279999999999999988875432 456899999999998
Q ss_pred hcccccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCCCcE
Q 009691 315 GWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLL 394 (528)
Q Consensus 315 ~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~L 394 (528)
++. ++.+ .++++. |+. ... .+...++|+|+++||||+.+.|. +.++||+|
T Consensus 167 ------l~~--~~~~--~~~i~~---~~~--~~~--~~~~~~~v~N~~~~GGg~~i~P~-------------A~~~DG~L 216 (293)
T TIGR03702 167 ------FSE--LTAA--SCEFRG---PDF--HWE--GDFLALGIGNGRQAGGGQVLCPD-------------ALINDGLL 216 (293)
T ss_pred ------Hhh--CCCe--EEEEEE---CCE--EEE--eeEEEEEEECCCcCCCCceeCCC-------------CccCCceE
Confidence 542 2222 344444 443 222 25678889999999999999874 78999999
Q ss_pred EEEEecchhHHHHHH--hcCC---CcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEEeCceeeEE
Q 009691 395 EIVGFRDAWHGLVLL--APNG---HGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNML 469 (528)
Q Consensus 395 EVv~v~~~~~~~~ll--~~~~---~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~~~~v~mL 469 (528)
||+.++..+.++.++ +..+ ..+...++++++|+..+ ++++|+|||++... |++|++.+ +.++|+
T Consensus 217 dv~~v~~~~~~~~~l~~~~~g~~~~~~~~~~~~~i~i~~~~----~~~~~vDGE~~~~~------p~~i~v~p-~al~v~ 285 (293)
T TIGR03702 217 DVRILPAPELLPATLSTLFGGDKNPEFVRARLPWLEIEAPQ----PLTFNLDGEPLSGR------HFRIEVLP-GALRCH 285 (293)
T ss_pred EEEEeCCHHHHHHHHHHHhcCCCCCcEEEEEcCEEEEEeCC----CcEEEECCCcCCCc------eEEEEEEc-CeEEEE
Confidence 999998844332221 1112 23455677889998865 69999999999864 89999996 599999
Q ss_pred eCCC
Q 009691 470 ATPC 473 (528)
Q Consensus 470 ~~~~ 473 (528)
++..
T Consensus 286 ~p~~ 289 (293)
T TIGR03702 286 LPPG 289 (293)
T ss_pred cCCC
Confidence 9765
No 8
>PRK13054 lipid kinase; Reviewed
Probab=100.00 E-value=5.1e-40 Score=336.79 Aligned_cols=286 Identities=18% Similarity=0.164 Sum_probs=210.1
Q ss_pred CCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEE-eecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009691 74 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL-GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 151 (528)
Q Consensus 74 ~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL-~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GG 151 (528)
+++.+++|+||+|++ .+.+..+.+.|....+ +++ ....++++.+ +.+... .++...|||+||
T Consensus 2 ~~~~~~~i~N~~~~~---~~~~~~~~~~l~~~g~~~~v~~t~~~~~a~~-~a~~~~------------~~~~d~vvv~GG 65 (300)
T PRK13054 2 TFPKSLLILNGKSAG---NEELREAVGLLREEGHTLHVRVTWEKGDAAR-YVEEAL------------ALGVATVIAGGG 65 (300)
T ss_pred CCceEEEEECCCccc---hHHHHHHHHHHHHcCCEEEEEEecCCCcHHH-HHHHHH------------HcCCCEEEEECC
Confidence 457899999999863 3445555556654432 333 2234556544 222211 123457999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCC
Q 009691 152 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 231 (528)
Q Consensus 152 DGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~ 231 (528)
|||||+|+++|.......++|||+||+||||||||+||++. ++.++++.|.+++++++|+++++-
T Consensus 66 DGTl~evv~~l~~~~~~~~~~lgiiP~GTgNdfar~lgi~~--------~~~~a~~~i~~g~~~~iDlg~v~~------- 130 (300)
T PRK13054 66 DGTINEVATALAQLEGDARPALGILPLGTANDFATAAGIPL--------EPDKALKLAIEGRAQPIDLARVND------- 130 (300)
T ss_pred ccHHHHHHHHHHhhccCCCCcEEEEeCCcHhHHHHhcCCCC--------CHHHHHHHHHhCCceEEEEEEEcC-------
Confidence 99999999999753223468999999999999999999985 578889999999999999998741
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHH
Q 009691 232 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 311 (528)
Q Consensus 232 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 311 (528)
+++|+|.+|+|+||+|++..++..+ +.+++++|+..+
T Consensus 131 -----------------------------------~~~f~n~~~~G~~a~v~~~~~~~~k--------~~~G~~~Y~~~~ 167 (300)
T PRK13054 131 -----------------------------------RTYFINMATGGFGTRVTTETPEKLK--------AALGGVAYLIHG 167 (300)
T ss_pred -----------------------------------ceEEEEEeecchhHHHHHhhHHHHH--------hccchHHHHHHH
Confidence 0279999999999999988764322 356899999999
Q ss_pred HhhhcccccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCC
Q 009691 312 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 391 (528)
Q Consensus 312 lk~~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dD 391 (528)
++. +++ ++.+ .++++. |++ ..+. +...++|+|.++||||+.++|. +.++|
T Consensus 168 l~~------l~~--~~~~--~~~i~~---d~~--~~~~--~~~~~~v~N~~~~ggg~~~~p~-------------a~~~D 217 (300)
T PRK13054 168 LMR------MDT--LKPD--RCEIRG---PDF--HWQG--DALVIGIGNGRQAGGGQQLCPE-------------ALIND 217 (300)
T ss_pred HHH------Hhh--CCCe--EEEEEe---CCc--EEEe--eEEEEEEECCCcCCCCcccCCC-------------CcCCC
Confidence 988 542 3332 345555 554 2232 5678889999999999999874 78999
Q ss_pred CcEEEEEecchhHHHHH----Hhc---CCCcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEEeCc
Q 009691 392 GLLEIVGFRDAWHGLVL----LAP---NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLR 464 (528)
Q Consensus 392 G~LEVv~v~~~~~~~~l----l~~---~~~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~~~ 464 (528)
|+|||+.++..+..+.. +.+ ..+.++..++++|+|+..+ ++++|+|||++... |++|++.+ +
T Consensus 218 G~ldv~~~~~~~~~l~~l~~~~~g~~~~~~~v~~~~~~~v~i~~~~----~~~~~iDGE~~~~~------p~~i~v~p-~ 286 (300)
T PRK13054 218 GLLDLRILPAPQELLPTLLSTLTGGSEDNPNIIRARLPWLEIQAPH----ELTFNLDGEPLSGR------HFRIEVLP-A 286 (300)
T ss_pred CeEEEEEECCHHHHHHHHHHHHhCCCCCCCcEEEEECCEEEEEcCC----CCEEEeCCCcCCCc------cEEEEEEc-C
Confidence 99999999982222221 111 1235778899999999865 69999999999864 89999996 5
Q ss_pred eeeEEeCCCC
Q 009691 465 QVNMLATPCC 474 (528)
Q Consensus 465 ~v~mL~~~~~ 474 (528)
.+++|++..|
T Consensus 287 al~vl~p~~~ 296 (300)
T PRK13054 287 ALRCRLPPDC 296 (300)
T ss_pred eeEEEeCCCC
Confidence 9999997653
No 9
>PRK13055 putative lipid kinase; Reviewed
Probab=100.00 E-value=4.5e-40 Score=342.16 Aligned_cols=286 Identities=17% Similarity=0.173 Sum_probs=215.4
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EE--EeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-ID--LGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 152 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~d--L~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGD 152 (528)
++++||+||+||++++.+.+..+++.|....+ +. .++..+.++.+ +.+... .++...|||+|||
T Consensus 3 ~r~~iI~NP~sG~~~~~~~~~~i~~~l~~~g~~~~i~~t~~~~~~a~~-~~~~~~------------~~~~d~vvv~GGD 69 (334)
T PRK13055 3 KRARLIYNPTSGQEIMKKNVADILDILEQAGYETSAFQTTPEPNSAKN-EAKRAA------------EAGFDLIIAAGGD 69 (334)
T ss_pred ceEEEEECCCCCchhHHHHHHHHHHHHHHcCCeEEEEEeecCCccHHH-HHHHHh------------hcCCCEEEEECCC
Confidence 67999999999999999999999998876543 33 23334445433 222211 0234589999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCC
Q 009691 153 GTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 232 (528)
Q Consensus 153 GTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~g 232 (528)
||||+|+++|... ...+||||||+||||||||+||++.+ ++.++++.+.+++++++|++.++
T Consensus 70 GTl~evvngl~~~--~~~~~LgiiP~GTgNdfAr~Lgi~~~-------~~~~a~~~l~~g~~~~vD~g~v~--------- 131 (334)
T PRK13055 70 GTINEVVNGIAPL--EKRPKMAIIPAGTTNDYARALKIPRD-------NPVEAAKVILKNQTIKMDIGRAN--------- 131 (334)
T ss_pred CHHHHHHHHHhhc--CCCCcEEEECCCchhHHHHHcCCCCc-------CHHHHHHHHHcCCcEEeeEEEEC---------
Confidence 9999999999752 35689999999999999999999841 46788899999999999999873
Q ss_pred CCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHHH
Q 009691 233 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 312 (528)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~gl 312 (528)
+ .++|+|.+|+|+||.|+...+..++ +..++++|+..++
T Consensus 132 ----------------------------~-----~~~F~n~ag~G~da~v~~~~~~~~k--------~~~G~laY~~~~~ 170 (334)
T PRK13055 132 ----------------------------E-----DKYFINIAAGGSLTELTYSVPSQLK--------SMFGYLAYLAKGA 170 (334)
T ss_pred ----------------------------C-----CcEEEEEehhccchHHHHhcCHHHH--------hhccHHHHHHHHH
Confidence 0 0379999999999999988765443 3458999999999
Q ss_pred hhhcccccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCCC
Q 009691 313 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDG 392 (528)
Q Consensus 313 k~~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG 392 (528)
+. +++ ++.+ .+++++ ||. ..+. +...++|+|+++||||+.++|. +.++||
T Consensus 171 ~~------l~~--~~~~--~~~i~~---d~~--~~~~--~~~~~~v~n~~~~Gg~~~~~p~-------------a~~~DG 220 (334)
T PRK13055 171 EL------LPR--VSPV--PVRITY---DEG--VFEG--KISMFFLALTNSVGGFEQIVPD-------------AKLDDG 220 (334)
T ss_pred HH------HHh--cCCe--eEEEEE---CCE--EEEE--EEEEEEEEcCcccCCccccCCC-------------CcCCCc
Confidence 98 543 2332 456776 564 2222 5567889999999999988874 789999
Q ss_pred cEEEEEecchhH--HHHH----Hh-c---CCCcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEEe
Q 009691 393 LLEIVGFRDAWH--GLVL----LA-P---NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISH 462 (528)
Q Consensus 393 ~LEVv~v~~~~~--~~~l----l~-~---~~~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~ 462 (528)
+|||++++.... ++.+ +. + ..+.+++.++++++|+... ..++++|+|||+.+.. |+.|++.+
T Consensus 221 ~ldv~i~~~~~~~~~l~~~~~~~~~G~~~~~~~v~~~~~~~i~I~~~~--~~~~~~~iDGE~~~~~------pv~i~v~p 292 (334)
T PRK13055 221 KFTLIIVKTANLFELLHLMALILNGGKHIDDPRVIYIKTSKLTIEPLG--DDRLMVNLDGEYGGDA------PMTFENLK 292 (334)
T ss_pred eEEEEEEcCCCHHHHHHHHHHHHhCCCCCCCCcEEEEEccEEEEEeCC--CCcceEeeCCCcCCCC------cEEEEEEc
Confidence 999999998642 2222 12 2 1235788899999998753 1258999999999764 89999996
Q ss_pred CceeeEEeCC
Q 009691 463 LRQVNMLATP 472 (528)
Q Consensus 463 ~~~v~mL~~~ 472 (528)
++++|+++.
T Consensus 293 -~al~v~~p~ 301 (334)
T PRK13055 293 -QHIEFFANT 301 (334)
T ss_pred -CeEEEEeCc
Confidence 589999854
No 10
>PRK13337 putative lipid kinase; Reviewed
Probab=100.00 E-value=8.6e-40 Score=335.69 Aligned_cols=283 Identities=17% Similarity=0.144 Sum_probs=214.7
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEe-ecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 153 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~-~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDG 153 (528)
++++||+||+||++++.+.+..+.+.|....+ +++. .+.++++.+ +.+.+. .++...|||+||||
T Consensus 2 ~r~~~I~Np~aG~~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~a~~-~a~~~~------------~~~~d~vvv~GGDG 68 (304)
T PRK13337 2 KRARIIYNPTSGRELFKKNLPDVLQKLEQAGYETSAHATTGPGDATL-AAERAV------------ERKFDLVIAAGGDG 68 (304)
T ss_pred ceEEEEECCcccchhHHHHHHHHHHHHHHcCCEEEEEEecCCCCHHH-HHHHHH------------hcCCCEEEEEcCCC
Confidence 57899999999998888888887877765443 3332 234555544 222211 12345799999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCCC
Q 009691 154 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGS 233 (528)
Q Consensus 154 TV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~g~ 233 (528)
|||+|+++|... ..++||||||.||||||||+||++. ++.++++.+..+.++++|+++++-
T Consensus 69 Tl~~vv~gl~~~--~~~~~lgiiP~GT~NdfAr~lgi~~--------~~~~a~~~i~~g~~~~vDlg~vn~--------- 129 (304)
T PRK13337 69 TLNEVVNGIAEK--ENRPKLGIIPVGTTNDFARALHVPR--------DIEKAADVIIEGHTVPVDIGKANN--------- 129 (304)
T ss_pred HHHHHHHHHhhC--CCCCcEEEECCcCHhHHHHHcCCCC--------CHHHHHHHHHcCCeEEEEEEEECC---------
Confidence 999999999753 3468999999999999999999985 578889999999999999998741
Q ss_pred CCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHHHh
Q 009691 234 FDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGT 313 (528)
Q Consensus 234 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~glk 313 (528)
++|+|.+|+|+||.|++.++...+ +..++++|+..+++
T Consensus 130 ----------------------------------~~fln~~g~G~~a~v~~~~~~~~k--------~~~G~~aY~~~~~~ 167 (304)
T PRK13337 130 ----------------------------------RYFINIAGGGRLTELTYEVPSKLK--------TMLGQLAYYLKGIE 167 (304)
T ss_pred ----------------------------------EEEEeeehhhHHHHHHHhcCHHHh--------cCcccHHHHHHHHH
Confidence 379999999999999987754322 45688999999998
Q ss_pred hhcccccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCCCc
Q 009691 314 QGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGL 393 (528)
Q Consensus 314 ~~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~ 393 (528)
. +++ .+.+ .+++++ ||+ ..+. +...++|+|+++||||+.++|. +.++||+
T Consensus 168 ~------l~~--~~~~--~~~i~~---d~~--~~~~--~~~~~~v~n~~~~gg~~~~~p~-------------a~~~DG~ 217 (304)
T PRK13337 168 M------LPS--LKAT--DVRIEY---DGK--LFQG--EIMLFLLGLTNSVGGFEKLAPD-------------ASLDDGY 217 (304)
T ss_pred H------Hhh--CCCc--eEEEEE---CCe--EEEe--EEEEEEEEcCcccCCccccCCc-------------ccCCCCe
Confidence 7 543 2333 356666 665 2322 5567889999999999998874 7899999
Q ss_pred EEEEEecchhH--HHHHH--hc-----CCCcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEEeCc
Q 009691 394 LEIVGFRDAWH--GLVLL--AP-----NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLR 464 (528)
Q Consensus 394 LEVv~v~~~~~--~~~ll--~~-----~~~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~~~ 464 (528)
|||++++.... ++.++ +. ..+.+++.++++++|+..+ ++++|+|||+.... |+.|++.+ +
T Consensus 218 ldv~iv~~~~~~~~l~~~~~~~~g~~~~~~~v~~~~~~~~~i~~~~----~~~~~iDGE~~~~~------p~~i~v~p-~ 286 (304)
T PRK13337 218 FDLIIVKKANLAELIHIATLALRGEHIKHPKVIYTKANRIKVSSFD----KMQLNLDGEYGGKL------PAEFENLY-R 286 (304)
T ss_pred EEEEEEcCCCHHHHHHHHHHHHcCCcCCCCcEEEEEccEEEEEcCC----CCeEEeCCCcCCCC------CEEEEEec-c
Confidence 99999987642 22221 11 1245788899999999875 68999999999864 89999996 5
Q ss_pred eeeEEeCCC
Q 009691 465 QVNMLATPC 473 (528)
Q Consensus 465 ~v~mL~~~~ 473 (528)
.++++++..
T Consensus 287 al~v~~p~~ 295 (304)
T PRK13337 287 HIEVFVPKD 295 (304)
T ss_pred eEEEEeccc
Confidence 899998653
No 11
>PRK00861 putative lipid kinase; Reviewed
Probab=100.00 E-value=4.8e-39 Score=329.39 Aligned_cols=281 Identities=18% Similarity=0.172 Sum_probs=208.1
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEE-eecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDL-GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 154 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL-~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGT 154 (528)
++++||+||.||++++.+.++.++..|.+.--+++ ....++++.+ +.+... .++...||++|||||
T Consensus 3 ~~~~iI~NP~sG~~~~~~~~~~i~~~l~~~~~~~~~~t~~~~~a~~-~a~~~~------------~~~~d~vv~~GGDGT 69 (300)
T PRK00861 3 RSACLIFNPVAGQGNPEVDLALIRAILEPEMDLDIYLTTPEIGADQ-LAQEAI------------ERGAELIIASGGDGT 69 (300)
T ss_pred ceEEEEECCCCCCCchhhhHHHHHHHHHhcCceEEEEccCCCCHHH-HHHHHH------------hcCCCEEEEECChHH
Confidence 57899999999999988888888888875311333 2234455543 222211 123467999999999
Q ss_pred HHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCCCC
Q 009691 155 ASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSF 234 (528)
Q Consensus 155 V~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~g~~ 234 (528)
||+|+++|.. ..+|||+||+||||||||+||++. ++.++++.+.++.++++|+++++-
T Consensus 70 l~evv~~l~~----~~~~lgviP~GTgNdfAr~lgi~~--------~~~~a~~~i~~g~~~~iDlg~vn~---------- 127 (300)
T PRK00861 70 LSAVAGALIG----TDIPLGIIPRGTANAFAAALGIPD--------TIEEACRTILQGKTRRVDVAYCNG---------- 127 (300)
T ss_pred HHHHHHHHhc----CCCcEEEEcCCchhHHHHHcCCCC--------CHHHHHHHHHcCCcEEeeEEEECC----------
Confidence 9999999975 468999999999999999999985 577889999999999999998740
Q ss_pred CCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHHHhh
Q 009691 235 DPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQ 314 (528)
Q Consensus 235 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~glk~ 314 (528)
++|+|.+|+|+||+|+...++..+ +..++++|++.+++.
T Consensus 128 ---------------------------------~~fin~a~~G~~a~v~~~~~~~~k--------~~~G~~aY~~~~l~~ 166 (300)
T PRK00861 128 ---------------------------------QPMILLAGIGFEAETVEEADREAK--------NRFGILAYILSGLQQ 166 (300)
T ss_pred ---------------------------------EEEEEEEeccHHHHHHHHhhHHHH--------hcccHHHHHHHHHHH
Confidence 269999999999999988765433 345899999999998
Q ss_pred hcccccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCC-CCCCccccccccCCCCCCcCCCc
Q 009691 315 GWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDP-WGKPFRKKLRERGLTPPYVDDGL 393 (528)
Q Consensus 315 ~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~lp~~i~~ivvlN~~s~GGG~~~-w~~~~~~~~~~~~~~~a~~dDG~ 393 (528)
++. ++.+ .+++++ ||+ .++. +...++|+|++++++.+-. .| .+.++||+
T Consensus 167 ------l~~--~~~~--~~~i~~---dg~--~~~~--~~~~i~v~N~~~~~~~~~~g~p-------------~a~~~DG~ 216 (300)
T PRK00861 167 ------LRE--LESF--EVEIET---EDQ--IITT--NAVAVTVANAAPPTSVLAQGPG-------------AVIPDDGL 216 (300)
T ss_pred ------hcc--CCCe--eEEEEE---CCe--EEEE--EEEEEEEECCCCcccccccCCC-------------CCCCCCce
Confidence 543 2332 356666 665 3332 5568899999855322110 12 37899999
Q ss_pred EEEEEecchhH--HHH----HH--h--c---CCCcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEE
Q 009691 394 LEIVGFRDAWH--GLV----LL--A--P---NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEI 460 (528)
Q Consensus 394 LEVv~v~~~~~--~~~----ll--~--~---~~~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I 460 (528)
|||++++.... ++. ++ + + ..+.+++.++++++|+..+ ++++|+|||+.... |++|+|
T Consensus 217 ldv~iv~~~~~~~~l~~~~~l~~~~~~g~~~~~~~v~~~~~~~i~I~~~~----~~~~~~DGE~~~~~------p~~i~v 286 (300)
T PRK00861 217 LDVTIVAPKNLAEAVAASYHLLQTALQGNPAERDDIGYLRAKQVKITTDP----PQKVVIDGEVVGTT------PIEIEC 286 (300)
T ss_pred EEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCCCCceEEEEccEEEEEeCC----CeEEEECCccCCCc------eEEEEE
Confidence 99999987643 221 11 1 1 1245788999999999876 69999999998764 899999
Q ss_pred EeCceeeEEeCCC
Q 009691 461 SHLRQVNMLATPC 473 (528)
Q Consensus 461 ~~~~~v~mL~~~~ 473 (528)
.+ +.++++++.+
T Consensus 287 ~p-~al~v~~p~~ 298 (300)
T PRK00861 287 LP-RSLKVFAPLQ 298 (300)
T ss_pred EC-CEEEEEeCCC
Confidence 96 5999998654
No 12
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=100.00 E-value=4.9e-39 Score=327.82 Aligned_cols=279 Identities=18% Similarity=0.206 Sum_probs=209.7
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEe-ecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 153 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~-~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDG 153 (528)
++++||+||.||++.+.+.+..+++.|....+ +.+. ...++++.+ ..+.. . ..+...|||+||||
T Consensus 2 ~~~~ii~Np~sg~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~~~~-~~~~~---~---------~~~~d~ivv~GGDG 68 (293)
T TIGR00147 2 AEAPAILNPTAGKSNDNKPLREVIMLLREEGMEIHVRVTWEKGDAAR-YVEEA---R---------KFGVDTVIAGGGDG 68 (293)
T ss_pred ceEEEEECCCccchhhHHHHHHHHHHHHHCCCEEEEEEecCcccHHH-HHHHH---H---------hcCCCEEEEECCCC
Confidence 57899999999998888899999988865443 3332 223333322 11111 0 02345799999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCCC
Q 009691 154 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGS 233 (528)
Q Consensus 154 TV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~g~ 233 (528)
|+++|++++... ...|+||+||+||||||||+||++. ++.++++.+.+++.+++|+++++-
T Consensus 69 Tl~~v~~~l~~~--~~~~~lgiiP~Gt~N~~a~~l~i~~--------~~~~~~~~l~~~~~~~~Dlg~v~~--------- 129 (293)
T TIGR00147 69 TINEVVNALIQL--DDIPALGILPLGTANDFARSLGIPE--------DLDKAAKLVIAGDARAIDMGQVNK--------- 129 (293)
T ss_pred hHHHHHHHHhcC--CCCCcEEEEcCcCHHHHHHHcCCCC--------CHHHHHHHHHcCCceEEEEEEECC---------
Confidence 999999999753 2457999999999999999999984 577888999999999999988740
Q ss_pred CCCCCCCCCCcccccccccccccccccCCcceeccc-eeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHHH
Q 009691 234 FDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGG-FWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 312 (528)
Q Consensus 234 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~-F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~gl 312 (528)
++ |+|++|+|+||++++.++... ++..++++|++.++
T Consensus 130 ----------------------------------~~~fln~~g~G~~a~v~~~~~~~~--------k~~~g~~~Y~~~~l 167 (293)
T TIGR00147 130 ----------------------------------QYCFINMAGGGFGTEITTETPEKL--------KAALGSLSYILSGL 167 (293)
T ss_pred ----------------------------------eEEEEEEEeechhhHhHhhCCHHH--------HhccchHHHHHHHH
Confidence 37 999999999999998875432 23458999999999
Q ss_pred hhhcccccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCCC
Q 009691 313 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDG 392 (528)
Q Consensus 313 k~~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG 392 (528)
+. +. .++++ .+++++ ||+ .++. +...++++|+++||||+.++|. +.++||
T Consensus 168 ~~------l~--~~~~~--~~~i~~---d~~--~~~~--~~~~~~v~n~~~~gg~~~~~p~-------------a~~~DG 217 (293)
T TIGR00147 168 MR------MD--TLQPF--RCEIRG---EGE--HWQG--EAVVFLVGNGRQAGGGQKLAPD-------------ASINDG 217 (293)
T ss_pred HH------Hh--hCCCe--eEEEEE---CCe--EEEe--eEEEEEEeCCcccCCCcccCCc-------------cccCCC
Confidence 88 53 23332 356666 565 3433 4456778899999999999874 688999
Q ss_pred cEEEEEecchhH--HHHH----Hhc---CCCcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEEeC
Q 009691 393 LLEIVGFRDAWH--GLVL----LAP---NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHL 463 (528)
Q Consensus 393 ~LEVv~v~~~~~--~~~l----l~~---~~~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~~ 463 (528)
+|||+++++.+. ++.+ +.+ ..+.+++.++++++|+.++ ++++|+|||++... |+.|+|.+
T Consensus 218 ~l~v~~v~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~i~~~~----~~~~~iDGE~~~~~------p~~i~v~p- 286 (293)
T TIGR00147 218 LLDLRIFTNDNLLPALVLTLMSDEGKHTDNPNIIYGKASRIDIQTPH----KITFNLDGEPLGGT------PFHIEILP- 286 (293)
T ss_pred eeEEEEEcCCCHHHHHHHHHHHhcCCCCCCCcEEEEEccEEEEEcCC----CcEEEeCCCcCCCC------cEEEEEEh-
Confidence 999999987643 2221 112 1346788999999999876 68999999999874 79999996
Q ss_pred ceeeEE
Q 009691 464 RQVNML 469 (528)
Q Consensus 464 ~~v~mL 469 (528)
++++++
T Consensus 287 ~al~~~ 292 (293)
T TIGR00147 287 AHLRCR 292 (293)
T ss_pred hccEEe
Confidence 478876
No 13
>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=8.1e-38 Score=320.75 Aligned_cols=286 Identities=23% Similarity=0.305 Sum_probs=220.1
Q ss_pred CCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE---EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009691 75 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV---IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 151 (528)
Q Consensus 75 ~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV---~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GG 151 (528)
.+.+.+|+||.||.+++.+.++.+++.|....+ ...++ ..+++.+.+ +.+. ..+...||++||
T Consensus 2 ~~~~~~i~Np~sG~~~~~~~~~~~~~~l~~~g~~~~~~~t~-~~g~a~~~a-~~a~------------~~~~D~via~GG 67 (301)
T COG1597 2 MKKALLIYNPTSGKGKAKKLLREVEELLEEAGHELSVRVTE-EAGDAIEIA-REAA------------VEGYDTVIAAGG 67 (301)
T ss_pred CceEEEEEcccccccchhhHHHHHHHHHHhcCCeEEEEEee-cCccHHHHH-HHHH------------hcCCCEEEEecC
Confidence 467899999999999999999999998876432 22233 335665532 2211 123568999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCC
Q 009691 152 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 231 (528)
Q Consensus 152 DGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~ 231 (528)
|||||+|+|+|.+. ..++|||||+||+|||||+||||. .++.++++.+.+++++.+|+++++
T Consensus 68 DGTv~evingl~~~---~~~~LgilP~GT~NdfAr~Lgip~-------~~~~~Al~~i~~g~~~~vDlg~~~-------- 129 (301)
T COG1597 68 DGTVNEVANGLAGT---DDPPLGILPGGTANDFARALGIPL-------DDIEAALELIKSGETRKVDLGQVN-------- 129 (301)
T ss_pred cchHHHHHHHHhcC---CCCceEEecCCchHHHHHHcCCCc-------hhHHHHHHHHHcCCeEEEeehhcC--------
Confidence 99999999999873 222399999999999999999995 248899999999999999998542
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHH
Q 009691 232 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 311 (528)
Q Consensus 232 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 311 (528)
+. .||+|.+|+|+||+++++.+..|+ +..+.++|++.+
T Consensus 130 ------------------------------~~----~~fin~a~~G~~a~~~~~~~~~~k--------~~~g~~~y~~~~ 167 (301)
T COG1597 130 ------------------------------GR----RYFINNAGIGFDAEVVAAVEEERK--------KGFGRLAYALAG 167 (301)
T ss_pred ------------------------------Cc----ceEEEEeecchhHHHHHhhcHHHH--------hccchHHHHHHH
Confidence 10 279999999999999999988776 346889999999
Q ss_pred HhhhcccccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCC
Q 009691 312 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 391 (528)
Q Consensus 312 lk~~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dD 391 (528)
++. +. ..+++ .+++++ |++ ..+. ....+++.|.+++|||..+.|. +.++|
T Consensus 168 ~~~------l~--~~~~~--~~~i~~---d~~--~~~~--~~~~~~~~~~~~~gg~~~~~p~-------------a~~~d 217 (301)
T COG1597 168 LAV------LA--RLKPF--RIEIEY---DGK--TFEG--EALALLVFNGNSYGGGMKLAPD-------------ASLDD 217 (301)
T ss_pred HHh------cc--ccCCC--cEEEEE---cCc--EEEE--EEEEEEEecCcccccccccCCc-------------CCCCC
Confidence 987 43 22333 467887 444 2222 4567888888899999999874 78999
Q ss_pred CcEEEEEecchhH--HHHHH--hcCC-----CcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEEe
Q 009691 392 GLLEIVGFRDAWH--GLVLL--APNG-----HGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISH 462 (528)
Q Consensus 392 G~LEVv~v~~~~~--~~~ll--~~~~-----~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~ 462 (528)
|+|+++.++.... ++.++ +..+ ..+.+.++++++|+... ++++++|||+.... |+.|++.+
T Consensus 218 G~l~~~i~~~~~~~~~~~l~~~~~~G~~~~~~~v~~~~~~~~~i~~~~----~~~~~~DGE~~~~~------p~~i~~~p 287 (301)
T COG1597 218 GLLDVYILKPQSLLELLALLPDLLRGKHLENPDVEYLRAKKLEITSDP----PIPVNLDGEYLGKT------PVTIEVLP 287 (301)
T ss_pred ceEEEEEEccccHHHHHHHHHHHhCCCccCCCCeEEEeccEEEEEcCC----CceEeeCCccCCCC------cEEEEEec
Confidence 9999999998632 22222 2222 34888999999999985 69999999999885 79999996
Q ss_pred CceeeEEeCCCCC
Q 009691 463 LRQVNMLATPCCR 475 (528)
Q Consensus 463 ~~~v~mL~~~~~~ 475 (528)
++++|+++..+.
T Consensus 288 -~al~vl~p~~~~ 299 (301)
T COG1597 288 -GALRVLVPPDRP 299 (301)
T ss_pred -ccEEEEcCCCCC
Confidence 599999998654
No 14
>PRK12361 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-36 Score=335.60 Aligned_cols=287 Identities=20% Similarity=0.216 Sum_probs=209.5
Q ss_pred CCeEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEee-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009691 75 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 153 (528)
Q Consensus 75 ~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~-~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDG 153 (528)
.++++||+||+||++++.+.++.+++.|.+.--+.+.. ..++++.+ +.+... .++...||||||||
T Consensus 242 ~~~~~iI~NP~SG~g~~~~~~~~i~~~L~~~~~~~v~~t~~~~~a~~-la~~~~------------~~~~d~Viv~GGDG 308 (547)
T PRK12361 242 HKRAWLIANPVSGGGKWQEYGEQIQRELKAYFDLTVKLTTPEISAEA-LAKQAR------------KAGADIVIACGGDG 308 (547)
T ss_pred CCceEEEECCCCCCCcHHHHHHHHHHHHhcCCceEEEECCCCccHHH-HHHHHH------------hcCCCEEEEECCCc
Confidence 47899999999999999999999999888641122222 23344433 222211 02345799999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhcc-CCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCC
Q 009691 154 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSF-GWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 232 (528)
Q Consensus 154 TV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~L-Gwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~g 232 (528)
|||+|++++.+ .+++|||||+||||||||+| ||+.. ..++.++++.|.+++++++|++.++-
T Consensus 309 Tl~ev~~~l~~----~~~~lgiiP~GTgNdfAr~L~gi~~~-----~~~~~~a~~~i~~g~~~~iD~g~vn~-------- 371 (547)
T PRK12361 309 TVTEVASELVN----TDITLGIIPLGTANALSHALFGLGSK-----LIPVEQACDNIIQGHTQRIDTARCND-------- 371 (547)
T ss_pred HHHHHHHHHhc----CCCCEEEecCCchhHHHHHhcCCCCC-----CccHHHHHHHHHhCCCeEEEEEEEcC--------
Confidence 99999999975 56899999999999999999 99841 02577889999999999999988740
Q ss_pred CCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHHH
Q 009691 233 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 312 (528)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~gl 312 (528)
++|+|++|+|+||+|+...++.++ +..++++|+..++
T Consensus 372 -----------------------------------~~fln~agiG~da~v~~~~~~~~k--------~~~G~laY~~~~~ 408 (547)
T PRK12361 372 -----------------------------------RLMLLLVGIGFEQKMIESADRERK--------NALGQLAYLDGLW 408 (547)
T ss_pred -----------------------------------eEEEEEEeechhHHHHHhccHHHH--------hccCHHHHHHHHH
Confidence 369999999999999998876554 3568999999999
Q ss_pred hhhcccccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCCC
Q 009691 313 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDG 392 (528)
Q Consensus 313 k~~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG 392 (528)
+. +++ ++.+ .+++++ ||+. ..+. +..+++|+|+..|++....-+ ..+++|||
T Consensus 409 ~~------l~~--~~~~--~l~i~~---dg~~-~~~~--~~~~l~v~N~~~~~~~~~~Gg------------g~~~~~DG 460 (547)
T PRK12361 409 RA------VNE--NETL--TLTVTL---DDAE-PQTI--STHSLVVANAAPFTSLLAQGG------------GEPNMTDG 460 (547)
T ss_pred HH------hhc--CCCe--eEEEEE---CCCC-ceEE--EEEEEEEEcCCCcccccccCC------------CCCCCCCc
Confidence 88 653 2332 467777 4531 1122 567888999876532110000 01468999
Q ss_pred cEEEEEecchh----HHHHH----Hhc-----CCCcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEE
Q 009691 393 LLEIVGFRDAW----HGLVL----LAP-----NGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVE 459 (528)
Q Consensus 393 ~LEVv~v~~~~----~~~~l----l~~-----~~~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~ 459 (528)
+|||++++... +++.+ +.+ ..+.+++.++++|+|+.++ ++++|+|||+.... |++|+
T Consensus 461 ~Ldv~~v~~~~~~~~~l~~l~~~~~~g~~~~~~~~~v~~~~~k~v~I~~~~----~~~~~iDGE~~~~~------p~~i~ 530 (547)
T PRK12361 461 LLDITWLDSGGEPGEQLLSLAELALSGLGKEPEANKVHHAHAKKVTISSQK----PIKYVIDGELFEDE------DLTIE 530 (547)
T ss_pred eeEEEEEcCCCcchHHHHHHHHHHHHHhcccCCCCceEEEEeeEEEEEeCC----ceEEEECCccCCce------EEEEE
Confidence 99999998752 32221 111 2356888999999999875 69999999999864 89999
Q ss_pred EEeCceeeEEeCCC
Q 009691 460 ISHLRQVNMLATPC 473 (528)
Q Consensus 460 I~~~~~v~mL~~~~ 473 (528)
|.+ ++++++++..
T Consensus 531 v~p-~al~vlvp~~ 543 (547)
T PRK12361 531 VQP-ASLKVFVPYQ 543 (547)
T ss_pred Eec-CceEEEecCc
Confidence 996 5899999654
No 15
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=100.00 E-value=8.1e-36 Score=323.38 Aligned_cols=295 Identities=15% Similarity=0.172 Sum_probs=205.3
Q ss_pred CCCeEEEEEcCcCCCCChhhHHH-HHHHHhccCcE-EEEe-ecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 009691 74 PSCPVLVFINSKSGGQLGGKLLL-TYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 150 (528)
Q Consensus 74 ~~~pllVivNPkSGg~~g~~ll~-~~~~~L~~~qV-~dL~-~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~G 150 (528)
.+++++||+||.||++++.+++. .++.+|....+ +++. ...++++.+ +.+.+. ..+...|||+|
T Consensus 110 ~~kr~lvIvNP~SGkg~a~k~~~~~v~~~L~~~gi~~~v~~T~~~ghA~~-la~~~~------------~~~~D~VV~vG 176 (481)
T PLN02958 110 RPKRLLVFVNPFGGKKSASKIFFDVVKPLLEDADIQLTIQETKYQLHAKE-VVRTMD------------LSKYDGIVCVS 176 (481)
T ss_pred CCcEEEEEEcCCCCCcchhHHHHHHHHHHHHHcCCeEEEEeccCccHHHH-HHHHhh------------hcCCCEEEEEc
Confidence 45789999999999999888764 67878876543 3332 235677654 322221 12346799999
Q ss_pred CchHHHHHHHHHhcCCC---CCCCCEEEeeCCCCcchhhcc----CCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEe
Q 009691 151 GDGTASWLLGVVSDLKL---PHSPPVATVPLGTGNNIPFSF----GWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 223 (528)
Q Consensus 151 GDGTV~~Vl~~l~~~~~---~~~~plgiIPlGTGNDlAR~L----Gwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~ 223 (528)
||||||+|+|+|..... ..++||||||+||||||||+| |++. ++.++++.|..+..+.+|+++|+
T Consensus 177 GDGTlnEVvNGL~~~~~~~~~~~~pLGiIPaGTgNdfArsL~~~~gip~--------~~~~A~~~I~~g~~~~vDlg~v~ 248 (481)
T PLN02958 177 GDGILVEVVNGLLEREDWKTAIKLPIGMVPAGTGNGMAKSLLDSVGEPC--------SATNAVLAIIRGHKCSLDVATIL 248 (481)
T ss_pred CCCHHHHHHHHHhhCccccccccCceEEecCcCcchhhhhhccccCCCc--------CHHHHHHHHHcCCceEEeEEEEE
Confidence 99999999999975310 136899999999999999999 8874 57788888999999999999985
Q ss_pred eeecCCCCCCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccch
Q 009691 224 MRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVN 303 (528)
Q Consensus 224 ~~~~~~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~n 303 (528)
.. + +. .+|+|.+|+||||+|....+ + .|+.|
T Consensus 249 ~~-----------------------------------~--~~--~f~vn~~g~GfdAdV~~~se--~--------kr~lG 279 (481)
T PLN02958 249 QG-----------------------------------E--TK--FFSVLMLAWGLVADIDIESE--K--------YRWMG 279 (481)
T ss_pred cC-----------------------------------C--ce--EEEEEeeeeehhhhhhcccc--c--------ccccc
Confidence 10 0 01 13589999999999964422 1 34579
Q ss_pred hHHHHHHHHhhhcccccccCCCCCCCcceEEEEEE---------------ec-C----------------------CcEE
Q 009691 304 QSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIM---------------KK-Q----------------------GQWE 345 (528)
Q Consensus 304 kl~Y~~~glk~~~~~~~l~~~~~k~l~~~i~l~vd---------------~~-d----------------------g~~~ 345 (528)
+++|.+++++. +++ .+.+ ..+|++. .. + .+|+
T Consensus 280 ~lrY~~~~l~~------l~~--~r~y--~~~I~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 349 (481)
T PLN02958 280 SARLDFYGLQR------ILC--LRQY--NGRISFVPAPGFEAYGEPTSYNGESTSKEESGKDKQHGYQGPDVKLENLDWR 349 (481)
T ss_pred hHHHHHHHHHH------HHh--cCCc--ceEEEEEeccccccccccccccccccccccccccccccccCCccccCCccce
Confidence 99999999998 542 2222 2333321 00 0 0122
Q ss_pred EEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCCCcEEEEEecchhHH--HHHH--hc-----CCCcc
Q 009691 346 ELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHG--LVLL--AP-----NGHGT 416 (528)
Q Consensus 346 ~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~LEVv~v~~~~~~--~~ll--~~-----~~~~~ 416 (528)
.++. ...+++++|.+++|||+.+.|. +.++||+|||+.+++.+.+ +.++ +. ..+.+
T Consensus 350 ~~~~--~fl~v~v~N~~~~Ggg~~iaP~-------------A~l~DG~LDlviv~~~s~~~lL~~l~~~~~G~h~~~~~V 414 (481)
T PLN02958 350 TIKG--PFVSVWLHNVPWGGEDTLAAPD-------------AKFSDGYLDLILIKDCPKLALLALMTKLSDGTHVKSPYV 414 (481)
T ss_pred Eeec--ceeEEeeccCcccCCCcccCCc-------------ccCCCCeEEEEEEcCCCHHHHHHHHHHHhCCCccCCCce
Confidence 1111 1233558999999999998874 7899999999999987542 2221 11 22458
Q ss_pred eEEEecEEEEEEccCC---CcceeeeecCCcCCCCCCCCCccEEEEEEeCceeeEEe
Q 009691 417 RLAQANRVRFEFEKGA---ADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLA 470 (528)
Q Consensus 417 rl~Q~~~V~I~~~~~~---~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~~~~v~mL~ 470 (528)
.+.++++++|+..... .++.++|+|||..... |++|++.+. ++.++-
T Consensus 415 ~~~k~k~~~I~~~~~~~~~~~~~~i~iDGE~~~~~------p~~i~v~~~-al~~~~ 464 (481)
T PLN02958 415 MYLKVKAFVLEPGPRTDDPTKGGIIDSDGEVLARG------NGSYKCDQK-ALMSYD 464 (481)
T ss_pred EEEEEEEEEEEECCcccCcCcCCeEEECCcccCCC------Cceeeeccc-cccccC
Confidence 8899999999874210 1247899999999764 789999863 666664
No 16
>PF00609 DAGK_acc: Diacylglycerol kinase accessory domain; InterPro: IPR000756 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. The DAG kinase domain is assumed to be an accessory domain. Upon cell stimulation, DAG kinase converts DAG into phosphatidate, initiating the resynthesis of phosphatidylinositols and attenuating protein kinase C activity. It catalyses the reaction: ATP + 1,2-diacylglycerol = ADP + 1,2-diacylglycerol 3-phosphate. The enzyme is stimulated by calcium and phosphatidylserine and phosphorylated by protein kinase C. This domain is always associated with IPR001206 from INTERPRO.; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway
Probab=100.00 E-value=1.3e-37 Score=291.85 Aligned_cols=160 Identities=36% Similarity=0.654 Sum_probs=142.1
Q ss_pred eeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHHHhhhcccccccCCCCCCCcceEEEEEEecCCcEEEEEe
Q 009691 270 FWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHI 349 (528)
Q Consensus 270 F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~glk~~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~l 349 (528)
|+||||||+||+|+++||+.|+++|++|+||+.||++|+..|+++ ++.+.++++.+.+++.+ ||+ .+.+
T Consensus 2 ~~NYfsiG~DA~ia~~Fh~~R~~~P~~f~sr~~NK~~Y~~~g~k~------~~~~~~~~~~~~i~l~~---dg~--~~~l 70 (161)
T PF00609_consen 2 MNNYFSIGVDAQIALGFHHSREKNPEKFNSRLLNKLWYAFFGFKA------LFQRSCKNLPKKIELEV---DGK--EVDL 70 (161)
T ss_pred eEecccccHhhHHHHHHhhccccChhhhccHHHHHHHHHHHHHHH------HHhchhcCchhhccccc---CCe--eEee
Confidence 899999999999999999999999999999999999999999999 55556677777788887 676 7888
Q ss_pred ccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCCCcEEEEEecchhHHHHHHhcCCCcceEEEecEEEEEEc
Q 009691 350 PRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNGHGTRLAQANRVRFEFE 429 (528)
Q Consensus 350 p~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~LEVv~v~~~~~~~~ll~~~~~~~rl~Q~~~V~I~~~ 429 (528)
|.++++|+++|++||+||.++|+........ ..|.+++++||+|||+++++++|++.++.+.++++|++|++.|+|+++
T Consensus 71 p~~~~~iv~lNIpSy~gG~~~W~~~~~~~~~-~~~~~~~~~Dg~lEVvg~~~~~hl~~~~~g~~~~~rl~Q~~~i~i~~~ 149 (161)
T PF00609_consen 71 PSSLESIVFLNIPSYGGGVDLWGNSKPDRSK-LKFKKQSMDDGKLEVVGFRGSFHLGQIQAGLSSAKRLAQGRPIRIETK 149 (161)
T ss_pred ecceeEEEEEccccccCCcccccCCcccccc-cccccccccCceEEEEEEcCchhhhhhhhccCCceEeecCCEEEEEEC
Confidence 8889999999999999999999875432111 357789999999999999999999988888899999999999999998
Q ss_pred cCCCcceeeeecCCc
Q 009691 430 KGAADHTFMRIDGEP 444 (528)
Q Consensus 430 ~~~~~~i~vqvDGE~ 444 (528)
++ ++||||||||
T Consensus 150 ~~---~~~~QvDGEp 161 (161)
T PF00609_consen 150 EN---KVPFQVDGEP 161 (161)
T ss_pred CC---ceeEEeCCCC
Confidence 71 6999999997
No 17
>PLN02204 diacylglycerol kinase
Probab=100.00 E-value=1.2e-30 Score=283.83 Aligned_cols=315 Identities=17% Similarity=0.186 Sum_probs=206.9
Q ss_pred CCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEE-eecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 009691 73 IPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL-GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 150 (528)
Q Consensus 73 ~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL-~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~G 150 (528)
...++++|||||.||++++.+.|..+..+|....+ +++ ..+.++++.+ +.+.+..+ +......||++|
T Consensus 157 ~r~k~llVivNP~sGkg~~~~~~~~V~p~f~~a~i~~~v~~T~~aghA~d-~~~~~~~~---------~l~~~D~VVaVG 226 (601)
T PLN02204 157 GRPKNLLVFVHPLSGKGSGSRTWETVSPIFIRAKVKTKVIVTERAGHAFD-VMASISNK---------ELKSYDGVIAVG 226 (601)
T ss_pred CCCceEEEEECCCCCCcchHHHHHHHHHHHHHcCCeEEEEEecCcchHHH-HHHHHhhh---------hccCCCEEEEEc
Confidence 34578999999999999999999999999876544 332 2235677654 22222110 012346799999
Q ss_pred CchHHHHHHHHHhcCCC---------------------------------------------------------------
Q 009691 151 GDGTASWLLGVVSDLKL--------------------------------------------------------------- 167 (528)
Q Consensus 151 GDGTV~~Vl~~l~~~~~--------------------------------------------------------------- 167 (528)
||||+|+|+|+|...+.
T Consensus 227 GDGt~nEVlNGL~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (601)
T PLN02204 227 GDGFFNEILNGYLLSRLKVPYPPSPSDSVHSVQSRGSSSVHEPNETVHECDNEDHSPLLSDSVQEVMNFRTENGSCEGDQ 306 (601)
T ss_pred CccHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999963110
Q ss_pred -------CCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCCCCCCCCCC
Q 009691 168 -------PHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPL 240 (528)
Q Consensus 168 -------~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~g~~~~~~~~ 240 (528)
..+++|||||+|||||||+.++.+. ++..++..|..|+.+.+|+++|+-.... .
T Consensus 307 ~~~~~~~~~~~~lGIIPaGSgN~~a~~~~g~~--------dp~taa~~Ii~G~~~~lDig~V~~~~~~----~------- 367 (601)
T PLN02204 307 DSDFPFPNERFRFGIIPAGSTDAIVMCTTGER--------DPVTSALHIILGRRVCLDIAQVVRWKTT----S------- 367 (601)
T ss_pred cccccccCCCceEEEECCccHHHHHHHccCCC--------CHHHHHHHHHhCCCeEeeEEEEeccccc----c-------
Confidence 1357899999999999999887653 5777888899999999999999632100 0
Q ss_pred CCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHHHhhhccccc
Q 009691 241 ELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAP 320 (528)
Q Consensus 241 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~glk~~~~~~~ 320 (528)
.. +.. .+.+||.|.+|+||||+|+...++ .|+.|+++|.+.+++.
T Consensus 368 --------------~~--~~~---~~~ryf~s~ag~Gf~gdVi~esek----------~R~mG~~rY~~~g~k~------ 412 (601)
T PLN02204 368 --------------TS--EIE---PYVRYAASFAGYGFYGDVISESEK----------YRWMGPKRYDYAGTKV------ 412 (601)
T ss_pred --------------cc--ccc---ccceEEEEEeecchHHHHHHHhhh----------hcccchHHHHHHHHHH------
Confidence 00 001 122589999999999999877432 3567999999999998
Q ss_pred ccCCCCCCCcceEEEEEEecCCcEEEEEe------------ccc---e---eEEEEEcCC--------------------
Q 009691 321 LLHPSSRNIAQMAKVKIMKKQGQWEELHI------------PRY---I---RSIVCLNLP-------------------- 362 (528)
Q Consensus 321 l~~~~~k~l~~~i~l~vd~~dg~~~~v~l------------p~~---i---~~ivvlN~~-------------------- 362 (528)
++. .+.+ .++|.+ ++. ..+. +.. + ..+.|+|.+
T Consensus 413 ~~~--~r~y--~~~V~~---d~~--~~~~~~~~~~~~~~~~~~~~~~~~c~~~c~Vcn~~~~~~~~~~~p~~~~~~~~W~ 483 (601)
T PLN02204 413 FLK--HRSY--EAEVAY---LET--ESEKSKASSEARKRTGPKKSEKIVCRTNCSVCNTKVSTNSPSTTPNSCPEETRWL 483 (601)
T ss_pred HHh--CCCc--eEEEEE---CCe--Eeeecccccccccccccccccchhhhhheeeecccccccccccccccccccccce
Confidence 553 2222 356776 343 1111 000 0 135567754
Q ss_pred -CCCC----CCCCCCCCccccccccCC-CCCCcCCCcEEEEEecchhHH--HHH---Hhc------CCCcceEEEecEEE
Q 009691 363 -SFSG----GLDPWGKPFRKKLRERGL-TPPYVDDGLLEIVGFRDAWHG--LVL---LAP------NGHGTRLAQANRVR 425 (528)
Q Consensus 363 -s~GG----G~~~w~~~~~~~~~~~~~-~~a~~dDG~LEVv~v~~~~~~--~~l---l~~------~~~~~rl~Q~~~V~ 425 (528)
++|+ |..+....+.+ ..+++ ..+.++||.|+|+.+++.++. +.+ +.. ..+.+.+.++++++
T Consensus 484 ~~~G~f~~vG~~iis~~~~r--ap~gl~pdA~l~DG~LDLilVr~~s~~~~L~~L~~l~~~gG~~l~~~~Ve~~ktk~f~ 561 (601)
T PLN02204 484 RSKGRFLSVGAAIISNRNER--APDGLVADAHLSDGFLHLILIKDCPHPLYLWHLTQLAKRGGEPLNFEFVEHHKTPAFT 561 (601)
T ss_pred eecCceEEeeeecccccccc--cccccCCCCcCCCCeEEEEEECCCCHHHHHHHHHHHHhhcCccCCCCcEEEEEeeEEE
Confidence 1222 21111000000 00011 258899999999999987642 211 121 12357889999999
Q ss_pred EEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEEeCceeeEEeCC
Q 009691 426 FEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLATP 472 (528)
Q Consensus 426 I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~~~~v~mL~~~ 472 (528)
|+.... +.++++|||..... |+.++|.+ +.+++++..
T Consensus 562 ~~s~~~---~~~~niDGE~~~~~------~v~v~V~~-~al~lfa~g 598 (601)
T PLN02204 562 FTSFGD---ESVWNLDGEIFQAH------QLSAQVFR-GLVNLFASG 598 (601)
T ss_pred EEECCC---CceEEeCCCcCCCc------cEEEEEEc-CeeEEEecC
Confidence 987541 46799999998764 79999985 589998854
No 18
>smart00045 DAGKa Diacylglycerol kinase accessory domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain might either be an accessory domain or else contribute to the catalytic domain. Bacterial homologues are known.
Probab=99.90 E-value=8.9e-24 Score=197.91 Aligned_cols=159 Identities=32% Similarity=0.637 Sum_probs=122.9
Q ss_pred eeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHHHhhhcccccccCCCCCCCcceEEEEEEecCCcEEEEEe
Q 009691 270 FWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHI 349 (528)
Q Consensus 270 F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~glk~~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~l 349 (528)
|+||+||||||.|++.++..|+++|.+|++++.|+++|+..+++. ++...++++...++|++ ||+ ....
T Consensus 2 ~~N~~giGfDA~V~~~~~~~r~~~~~~~~~~~~g~l~Y~~~~l~~------l~~~~~~~~~~~~~i~~---dg~--~~~~ 70 (160)
T smart00045 2 MNNYFSIGVDAHIALEFHNKREANPEKFNSRLKNKMWYFELGTKD------LFFRTCKDLHERIELEC---DGV--DVDL 70 (160)
T ss_pred ccccccccHhHHHHHHHHHHhhcCchhhcccceeeeeeeecchHH------hhhccccchhhceEEEE---CCE--eccC
Confidence 899999999999999999999999999888889999999999998 43222333323467777 665 3444
Q ss_pred ccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCCCcEEEEEecchhHHHHHHhcCCCcceEEEecEEEEEEc
Q 009691 350 PRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNGHGTRLAQANRVRFEFE 429 (528)
Q Consensus 350 p~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~LEVv~v~~~~~~~~ll~~~~~~~rl~Q~~~V~I~~~ 429 (528)
+.++.+++++|++|||||+.+||.... ..+.+..++++||+|||+++++.+++..++....+.+++.|+++|+|++.
T Consensus 71 ~~~~~~v~v~N~~~~ggG~~i~p~~~~---~~~~~p~a~~~DG~ldv~~~~~~~~~~~~~~~~~~~v~~~~~~~v~i~i~ 147 (160)
T smart00045 71 PNSLEGIAVLNIPSYGGGTNLWGTTDK---EDLNFSKQSHDDGLLEVVGLTGAMHMAQIRQVGLAGRRIAQCSEVRITIK 147 (160)
T ss_pred CCCccEEEEECCCccccCcccccCCcc---cccccCCCCCCCceEEEEEEcCchhhhhhhhccCCCceeecCceEEEEEe
Confidence 324788999999999999999975221 12345579999999999999998776544434456789999999995543
Q ss_pred cCCCcceeeeecCCc
Q 009691 430 KGAADHTFMRIDGEP 444 (528)
Q Consensus 430 ~~~~~~i~vqvDGE~ 444 (528)
. .+++++|+|||+
T Consensus 148 ~--~~~~~~q~DGE~ 160 (160)
T smart00045 148 T--SKTIPMQVDGEP 160 (160)
T ss_pred c--CCceeeecCCCC
Confidence 3 237999999996
No 19
>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ]. Eukaryotic DAG-kinase (2.7.1.107 from EC) catalyses the phosphorylation of DAG to phosphatidic acid, thus modulating the balance between the two signaling lipids. At least ten different isoforms have been identified in mammals, which form 5 groups characterised by different functional domains, such as the calcium-binding EF hand (see PDOC00018 from PROSITEDOC), PH (see PDOC50003 from PROSITEDOC), SAM (see PDOC50105 from PROSITEDOC) , DAG/PE-binding C1 domain (see PDOC00379 from PROSITEDOC) and ankyrin repeats (see PDOC50088 from PROSITEDOC) []. In bacteria, an integral membrane DAG kinase forms a homotrimeric protein that lacks the DAGKc domain (see PDOC00820 from PROSITEDOC). In contrast, the bacterial yegS protein is a soluble cytosolic protein that contains the DAGKc domain in the N-terminal part. YegS is a lipid kinase with two structural domains, wherein the active site is located in the interdomain cleft, C-terminal to the DAGKc domain which forms an alpha/beta fold []. The tertiary structure resembles that of NAD kinases and contains a metal-binding site in the C-terminal region [, ]. This domain is usually associated with an accessory domain (see IPR000756 from INTERPRO).; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; PDB: 2JGR_A 2BON_A 3T5P_D 3S40_A 2P1R_A 2QV7_A 2QVL_A.
Probab=99.87 E-value=6.4e-22 Score=178.71 Aligned_cols=122 Identities=25% Similarity=0.316 Sum_probs=79.9
Q ss_pred eEEEEEcCcCCCCChhhHHHHHHHHhcc----CcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccC-cEEEEEcC
Q 009691 77 PVLVFINSKSGGQLGGKLLLTYRSLLNE----NQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKR-LRLIVAGG 151 (528)
Q Consensus 77 pllVivNPkSGg~~g~~ll~~~~~~L~~----~qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~-~~IIV~GG 151 (528)
+++||+||+||++++. ++.+++.|.. .+++......+.+.+ .+ ..+ .... ..||++||
T Consensus 1 k~~vi~Np~sG~~~~~--~~~v~~~l~~~~~~~~~~~t~~~~~~~~~---~~-~~~-----------~~~~~~~ivv~GG 63 (130)
T PF00781_consen 1 KVLVIINPKSGGGRAK--WKKVEPALRAAGIDYEVIETESAGHAEAL---AR-ILA-----------LDDYPDVIVVVGG 63 (130)
T ss_dssp SEEEEEETTSTTSHHH--HHHHHHHHHHTTCEEEEEEESSTTHHHHH---HH-HHH-----------HTTS-SEEEEEES
T ss_pred CEEEEECCCCCCCchh--HHHHHHHHHHcCCceEEEEEeccchHHHH---HH-HHh-----------hccCccEEEEEcC
Confidence 4799999999999998 3556555543 234433322222222 22 111 1233 68999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHH-HHHHHHcCCeeeEeEEEEe
Q 009691 152 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLS-FLEQVKNAKEMQIDSWHIL 223 (528)
Q Consensus 152 DGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~-~l~~I~~a~~~~iD~w~V~ 223 (528)
||||+++++++........+|||+||+||||||||+|||+. +... .+..+..+...++|+.+|+
T Consensus 64 DGTl~~vv~~l~~~~~~~~~~l~iiP~GT~N~~ar~lg~~~--------~~~~~a~~~~~~~~~~~~d~~~v~ 128 (130)
T PF00781_consen 64 DGTLNEVVNGLMGSDREDKPPLGIIPAGTGNDFARSLGIPS--------DPEANAALLIILGRVRKIDVGKVN 128 (130)
T ss_dssp HHHHHHHHHHHCTSTSSS--EEEEEE-SSS-HHHHHTT--S--------SHHH-HHHHHHHSEEEEEEEEEET
T ss_pred ccHHHHHHHHHhhcCCCccceEEEecCCChhHHHHHcCCCC--------CcHHHHHHHHHhCCCcEeEEEEeC
Confidence 99999999999875443467999999999999999999996 2333 4455555666799998874
No 20
>KOG1116 consensus Sphingosine kinase, involved in sphingolipid metabolism [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.86 E-value=3.2e-20 Score=199.28 Aligned_cols=299 Identities=19% Similarity=0.220 Sum_probs=193.8
Q ss_pred CCCeEEEEEcCcCCCCChhhHHHH-HHHHhccCcE-EEEe-ecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 009691 74 PSCPVLVFINSKSGGQLGGKLLLT-YRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 150 (528)
Q Consensus 74 ~~~pllVivNPkSGg~~g~~ll~~-~~~~L~~~qV-~dL~-~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~G 150 (528)
..+.++|||||.+|.|++.+++.. .+.+|....+ |++. +++|.+|.+ +.+.+. ..+.+-||++|
T Consensus 178 r~~~lLV~iNP~gGkGka~~~F~~~v~Pll~~A~i~~evv~T~~~~HAre-i~rt~d------------l~kyDgIv~vs 244 (579)
T KOG1116|consen 178 RPRRLLVFINPFGGKGKAKKLFKNHVEPLLSEAGISFEVVLTTRPNHARE-IVRTLD------------LGKYDGIVCVS 244 (579)
T ss_pred CCccEEEEECCCCCCccHHHHHHhhhhhhhhhcCceEEEEEecCccHHHH-HHHhhh------------ccccceEEEec
Confidence 358899999999999999988765 5556766555 5543 248899876 444431 13456799999
Q ss_pred CchHHHHHHHHHhcCC---CCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeec
Q 009691 151 GDGTASWLLGVVSDLK---LPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMK 227 (528)
Q Consensus 151 GDGTV~~Vl~~l~~~~---~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~ 227 (528)
|||+++||||+|.+-. .....|||+||+||||.||.++.|-.++ + -+..+.-.+.++....+|+..+.....
T Consensus 245 GDGl~hEVlNGLl~R~D~~~~~klPigiiP~GSGNala~Sv~~~~~~---~--~~~~a~l~iirg~~t~~dv~~v~~~~~ 319 (579)
T KOG1116|consen 245 GDGLLHEVLNGLLERPDWEAAVKLPIGIIPCGSGNALAKSVLWTNGP---D--LPLLATLLIIRGRLTPMDVSVVEYAGK 319 (579)
T ss_pred CCcCHHHhhhccccccchhhHhcCceeEeecCCccHHHHHhhcccCc---c--cchHHHHHHHccCCCchheeehhhccC
Confidence 9999999999997632 1257899999999999999999998631 1 133344556788889999988753210
Q ss_pred CCCCCCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHH
Q 009691 228 APKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTY 307 (528)
Q Consensus 228 ~~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y 307 (528)
.+.+..+...-|+-|+|-...++.| +.|...|
T Consensus 320 --------------------------------------~~~fSfLs~~wGlIADiDI~SEk~R----------~mG~~Rf 351 (579)
T KOG1116|consen 320 --------------------------------------DRHFSFLSAAWGLIADVDIESEKYR----------WMGPARF 351 (579)
T ss_pred --------------------------------------cceEEEEeeeeeeEEecccchHHHH----------hhcchhh
Confidence 0126789999999999976665444 4566777
Q ss_pred HHHHHhhhcccccccCCCCCCCcceEEEEEEe---c--------------------------------------------
Q 009691 308 LKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMK---K-------------------------------------------- 340 (528)
Q Consensus 308 ~~~glk~~~~~~~l~~~~~k~l~~~i~l~vd~---~-------------------------------------------- 340 (528)
.+.++.. .+| .++|+. ++.... +
T Consensus 352 ~lg~~~r-l~~----lr~Y~g-----ri~ylp~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~~~~~~ 421 (579)
T KOG1116|consen 352 TLGAFLR-LIQ----LRKYKG-----RIEYLPAKGKSAEPLPAHELEAADSEGCLSTHADTEPSEYPRLSVPKMSPKSVL 421 (579)
T ss_pred hHHHHHH-HHh----ccCCCc-----eEEEecccccccCcccchhhccccccccccccccccccccccccccccCccccc
Confidence 7766665 111 122221 111110 0
Q ss_pred --------------------------CCcEEEEEecc-ceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCCCc
Q 009691 341 --------------------------QGQWEELHIPR-YIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGL 393 (528)
Q Consensus 341 --------------------------dg~~~~v~lp~-~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~ 393 (528)
...|+. +++ +...+.-.=.++.|+.+.+.| .+..+||.
T Consensus 422 ~s~~~e~s~~~~~~~~~~~p~~~~p~psdw~~--~~~~d~~~~~a~~~sy~~~d~~~~P-------------~A~~~dg~ 486 (579)
T KOG1116|consen 422 RSPVSETSPVIPEDPLHLSPPLEEPLPSDWEV--VPGVDFVCILAILLSYLGADMKFAP-------------AARPDDGL 486 (579)
T ss_pred cCcccccCcccCCccccCCCcccCCCCcceee--ecCcceeeeehhhhhhccCCccccc-------------ccccCCCe
Confidence 011211 111 111111112235666666655 48899999
Q ss_pred EEEEEecchh--H-HHHHHhcCC---------CcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEE
Q 009691 394 LEIVGFRDAW--H-GLVLLAPNG---------HGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEIS 461 (528)
Q Consensus 394 LEVv~v~~~~--~-~~~ll~~~~---------~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~ 461 (528)
+|++++.... + ++.++.... +.+.+..++.++++.... ...+++|||.+... |..+++.
T Consensus 487 I~lv~~~~~~~r~~ll~~llald~gsh~~~~~p~v~~~~vra~r~epv~~---~~~~~vDGE~~~~e------p~q~~v~ 557 (579)
T KOG1116|consen 487 IHLVIVRAGGSRTQLLRLLLALDKGSHLHVECPFVKYVKVRAFRLEPVTP---SGYFAVDGELVPLE------PLQVQVL 557 (579)
T ss_pred EEEEEEccCCcHHHHHHHHHhhcccccccccCCceeEEEeEEEEEEEecC---CceEEecccEeecc------ceeEEec
Confidence 9999998652 2 333332221 234566777788877652 47899999999875 8999998
Q ss_pred eCceeeEEeCCC
Q 009691 462 HLRQVNMLATPC 473 (528)
Q Consensus 462 ~~~~v~mL~~~~ 473 (528)
+ +-+.+|....
T Consensus 558 p-~~i~~~s~~~ 568 (579)
T KOG1116|consen 558 P-GLILTLSGRG 568 (579)
T ss_pred c-cceeEEeccC
Confidence 6 5788888753
No 21
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain is presumed to be the catalytic domain. Bacterial homologues areknown.
Probab=99.85 E-value=4.4e-21 Score=172.44 Aligned_cols=100 Identities=49% Similarity=0.867 Sum_probs=76.7
Q ss_pred EEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHH
Q 009691 79 LVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWL 158 (528)
Q Consensus 79 lVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~V 158 (528)
+||+||+||++++.+++..+++.+.+.+|+........++.+ +.+. ......|+++|||||+|+|
T Consensus 1 lvi~NP~sG~~~~~~~~~~~~~~l~~~~v~~t~~~~~~~~~~-~~~~--------------~~~~d~vvv~GGDGTi~~v 65 (124)
T smart00046 1 LVFVNPKSGGGKGVKLLRKFRLLLNPAQVFDLTKKGPAAALV-IFRD--------------LPKFDRVLVCGGDGTVGWV 65 (124)
T ss_pred CEEEcCCCCCCccHHHHHHHHHHcCCceEEEEecCChHHHHH-HHhh--------------cCcCCEEEEEccccHHHHH
Confidence 589999999999999999999999887776655433343332 1111 1224489999999999999
Q ss_pred HHHHhcCCCC-CCCCEEEeeCCCCcchhhccCCCCC
Q 009691 159 LGVVSDLKLP-HSPPVATVPLGTGNNIPFSFGWGKK 193 (528)
Q Consensus 159 l~~l~~~~~~-~~~plgiIPlGTGNDlAR~LGwg~~ 193 (528)
+++|.+.... ..+|||+||+||||||||+|||+.+
T Consensus 66 vn~l~~~~~~~~~~plgiiP~GTgNdfar~lgi~~~ 101 (124)
T smart00046 66 LNALDKRELPLPEPPVAVLPLGTGNDLARSLGWGGG 101 (124)
T ss_pred HHHHHhcccccCCCcEEEeCCCChhHHHHHcCCCCC
Confidence 9999764211 1289999999999999999999874
No 22
>KOG1115 consensus Ceramide kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.50 E-value=4.3e-13 Score=138.33 Aligned_cols=297 Identities=17% Similarity=0.171 Sum_probs=179.5
Q ss_pred CCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE---EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 009691 74 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV---IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 150 (528)
Q Consensus 74 ~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV---~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~G 150 (528)
.++.++|||||.+|+|+|.++++....++--..| +.+|+ ...+|.+-++.. . ..+....+-||++|
T Consensus 157 RPknllvFinPfgGkG~g~ki~e~V~~~F~la~v~tkvivTE-rAnhA~d~~~ei----~------~~~~~~yDGiv~VG 225 (516)
T KOG1115|consen 157 RPKNLLVFINPFGGKGNGSKIWETVSKIFILAKVNTKVIVTE-RANHAFDVMAEI----Q------NKELHTYDGIVAVG 225 (516)
T ss_pred CCccEEEEEcCCCCCCcccchhhhhhhhEEeeecceeEEEEc-cccchhhhhhhC----C------HhhhhhcccEEEec
Confidence 3478999999999999999999997776532223 22344 444544322111 0 11222344599999
Q ss_pred CchHHHHHHHHHhc-------CCC--------CCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCee
Q 009691 151 GDGTASWLLGVVSD-------LKL--------PHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 215 (528)
Q Consensus 151 GDGTV~~Vl~~l~~-------~~~--------~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~ 215 (528)
|||-.||+|+++.- .++ ...+-+||||+|+.|-..-+---.. | .+.++| .|.-|+..
T Consensus 226 GDG~FnEiL~G~llrtQ~~ag~~i~~P~~~lv~~~~RfGiIpAGStd~iv~~t~gt~-----D--~~TSAl-HI~lG~~l 297 (516)
T KOG1115|consen 226 GDGFFNEILNGYLLRTQEVAGFRIEDPDHPLVSERPRFGIIPAGSTDAIVMCTTGTR-----D--PVTSAL-HIILGRKL 297 (516)
T ss_pred CchhHHHHHhhhhhhhhhhcCcccCCCCCcccCCCceeeeecCCCcCeEEEEeccCC-----c--ccccee-eeEeccce
Confidence 99999999998632 111 2456799999999998766653221 1 223333 34568889
Q ss_pred eEeEEEEeeeecCCCCCCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCch
Q 009691 216 QIDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPE 295 (528)
Q Consensus 216 ~iD~w~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~ 295 (528)
.+|+.+|.-. + .+-||-.|.+|.||-.+|...-++.
T Consensus 298 ~vDVctVht~-----------------------------------~---kLiRysaSa~gYGFyGDvl~dSEKY------ 333 (516)
T KOG1115|consen 298 FVDVCTVHTI-----------------------------------E---KLIRYSASAAGYGFYGDVLSDSEKY------ 333 (516)
T ss_pred eeeeeeeeec-----------------------------------c---hheeeehhhhcccccchhhhhhhhh------
Confidence 9999888511 0 1114678889999999998766544
Q ss_pred hhhhccchhHHHHHHHHhhhcccccccCCCCCCCcc----------------eEEEEEEecCCcEEEEEeccceeEEEEE
Q 009691 296 KFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQ----------------MAKVKIMKKQGQWEELHIPRYIRSIVCL 359 (528)
Q Consensus 296 ~f~srl~nkl~Y~~~glk~~~~~~~l~~~~~k~l~~----------------~i~l~vd~~dg~~~~v~lp~~i~~ivvl 359 (528)
|+.+...|=+.|+|. + +-|+.|+.--. -.+..-+ +.+|..+. .....|.|+
T Consensus 334 ----RWmGp~RYDfsglKt-f----lkH~~YegeVsFlpa~sen~~qe~~~~g~~~~~~--~k~Wq~~~--g~Fl~V~c~ 400 (516)
T KOG1115|consen 334 ----RWMGPKRYDFSGLKT-F----LKHRSYEGEVSFLPAESENPCQEPCPSGASLHTR--SKTWQRNT--GRFLKVLCR 400 (516)
T ss_pred ----hccCchhhhhHHHHH-H----HhccccceEEEecccccCCchhccccccCCcccC--cchhhhhh--hheeeeeEe
Confidence 567788999999998 1 22332221000 0001110 22343221 244567777
Q ss_pred cCCCCCCCCCCCCCCccccccccCCCCCCcCCCcEEEEEecchhHH--HHHH---hc-----CCCcceEEEecEEEEEEc
Q 009691 360 NLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHG--LVLL---AP-----NGHGTRLAQANRVRFEFE 429 (528)
Q Consensus 360 N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~LEVv~v~~~~~~--~~ll---~~-----~~~~~rl~Q~~~V~I~~~ 429 (528)
|+|....-..-|-.| ...++||-++++.++..++. +..+ +. ...-+....+.+|.....
T Consensus 401 aipciC~~~PrGLaP-----------~T~LndGs~dLil~R~~SRF~fi~fl~r~a~~~~qfdf~fVe~y~v~~v~~~s~ 469 (516)
T KOG1115|consen 401 AIPCICNSKPRGLAP-----------STTLNDGSEDLILCRTKSRFLFIGFLVRSARNERQFDFLFVEAYLVDGVLHLSL 469 (516)
T ss_pred eccccccCCCCCcCC-----------ccccCCCccceeeeecccchHHHHHHHHHhhcccccCceeeeeeeeeeEEEEee
Confidence 877654321111111 36799999999999987643 2222 11 112344556666665543
Q ss_pred cC---CCcceeeeecCCcCCCCCCCCCccEEEEEEe
Q 009691 430 KG---AADHTFMRIDGEPWKQPLPVDEDTVVVEISH 462 (528)
Q Consensus 430 ~~---~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~ 462 (528)
.. ..++....+|||...++ .|+.|++.+
T Consensus 470 ~~d~~~~d~~eWN~DGeile~p-----~~lh~rlHp 500 (516)
T KOG1115|consen 470 IKDCSRPDYLEWNLDGEILEQP-----KPLHFRLHP 500 (516)
T ss_pred cCCCCCCCcceeccCcchhcCC-----cceEEEech
Confidence 21 13356689999999997 478888764
No 23
>KOG4435 consensus Predicted lipid kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.61 E-value=2.1e-07 Score=96.70 Aligned_cols=131 Identities=18% Similarity=0.101 Sum_probs=76.3
Q ss_pred CCCeEEEEEcCcCCCCChhhHHH-HHHHHhcc--CcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 009691 74 PSCPVLVFINSKSGGQLGGKLLL-TYRSLLNE--NQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 150 (528)
Q Consensus 74 ~~~pllVivNPkSGg~~g~~ll~-~~~~~L~~--~qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~G 150 (528)
..++++|++||.+-.+....... ....+|+- .||-.+.....+++-. +...++ ...+.|+|+|
T Consensus 59 ~~Kkv~V~~Np~ank~~~r~~f~kna~P~lHLaG~~V~Ivktd~~gqak~-l~e~~~-------------t~~Dii~VaG 124 (535)
T KOG4435|consen 59 RPKKVFVLVNPEANKRGCRDQFNKNALPLLHLAGVQVDIVKTDNQGQAKA-LAEAVD-------------TQEDIIYVAG 124 (535)
T ss_pred ccceEEEEechhhccchhhhhhhcccchheeeccceEEEEecCcHHHHHH-HHHHhc-------------cCCCeEEEec
Confidence 34889999999987655443332 33344443 3442222223333211 111111 1237899999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCe---eeEeE
Q 009691 151 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKE---MQIDS 219 (528)
Q Consensus 151 GDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~---~~iD~ 219 (528)
||||+++|+.++...+ ....|++++|+|--|-...+.-......+++-+.+-+++..+.+.+. ..+|+
T Consensus 125 GDGT~~eVVTGi~Rrr-~~~~pv~~~P~G~~~l~~~s~l~~vfe~~d~V~h~~~a~~avikde~ksv~~fdv 195 (535)
T KOG4435|consen 125 GDGTIGEVVTGIFRRR-KAQLPVGFYPGGYDNLWLKSMLPSVFENSDDVRHACEAAMAVIKDEKKSVYAFDV 195 (535)
T ss_pred CCCcHHHhhHHHHhcc-cccCceeeccCccchHhhhhhchhhhccchHHHHHHHHHHHHhcccccceEEEEe
Confidence 9999999999998743 45789999999988765444322221223333445555556666665 55665
No 24
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=98.00 E-value=3.7e-05 Score=78.63 Aligned_cols=111 Identities=13% Similarity=0.107 Sum_probs=71.3
Q ss_pred eEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhh--ccCcEEEEEcCch
Q 009691 77 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEI--EKRLRLIVAGGDG 153 (528)
Q Consensus 77 pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~--~~~~~IIV~GGDG 153 (528)
++.+|+|+. ...+.++++++.+.|....+ +.+....... +. ..... .. ... .+...||++||||
T Consensus 2 ~v~iv~~~~--k~~~~~~~~~I~~~L~~~g~~v~v~~~~~~~-~~-~~~~~--------~~-~~~~~~~~d~vi~iGGDG 68 (277)
T PRK03708 2 RFGIVARRD--KEEALKLAYRVYDFLKVSGYEVVVDSETYEH-LP-EFSEE--------DV-LPLEEMDVDFIIAIGGDG 68 (277)
T ss_pred EEEEEecCC--CHHHHHHHHHHHHHHHHCCCEEEEecchhhh-cC-ccccc--------cc-ccccccCCCEEEEEeCcH
Confidence 367787864 46778889999988865432 2222100000 00 00000 00 001 1345799999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCee
Q 009691 154 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 215 (528)
Q Consensus 154 TV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~ 215 (528)
|+.++++ +.. ..+||..||.||. +|...+. + +++.++|+.+.++...
T Consensus 69 TlL~a~~-~~~----~~~pi~gIn~G~l-GFl~~~~-~--------~~~~~~l~~i~~g~~~ 115 (277)
T PRK03708 69 TILRIEH-KTK----KDIPILGINMGTL-GFLTEVE-P--------EETFFALSRLLEGDYF 115 (277)
T ss_pred HHHHHHH-hcC----CCCeEEEEeCCCC-CccccCC-H--------HHHHHHHHHHHcCCce
Confidence 9999999 654 4789999999998 8888775 2 3688899999988754
No 25
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.91 E-value=8.5e-05 Score=77.00 Aligned_cols=123 Identities=16% Similarity=0.126 Sum_probs=74.1
Q ss_pred CCeEEEEEcCcCCCCChhhHHHHHHHHhccC--cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009691 75 SCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 152 (528)
Q Consensus 75 ~~pllVivNPkSGg~~g~~ll~~~~~~L~~~--qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGD 152 (528)
.+++++|+|| |.....+++..+.+.|... +|+-................ .......||++|||
T Consensus 3 ~kkv~lI~n~--~~~~~~~~~~~i~~~L~~~g~~v~v~~~~~~~~~~~~~~~~-------------~~~~~d~vi~~GGD 67 (305)
T PRK02645 3 LKQVIIAYKA--GSSQAKEAAERCAKQLEARGCKVLMGPSGPKDNPYPVFLAS-------------ASELIDLAIVLGGD 67 (305)
T ss_pred cCEEEEEEeC--CCHHHHHHHHHHHHHHHHCCCEEEEecCchhhccccchhhc-------------cccCcCEEEEECCc
Confidence 4679999998 4456667788888877543 33221111111111100000 01124579999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeC-CCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeee
Q 009691 153 GTASWLLGVVSDLKLPHSPPVATVPL-GTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMR 225 (528)
Q Consensus 153 GTV~~Vl~~l~~~~~~~~~plgiIPl-GTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~ 225 (528)
||+..+++.+.. ..+||..|.+ |+-.=|+..-.. ... .++|+.+.+++..--.+..+...
T Consensus 68 GT~l~~~~~~~~----~~~pv~gin~~G~lGFL~~~~~~--------~~~-~~~l~~i~~g~~~i~~r~~L~~~ 128 (305)
T PRK02645 68 GTVLAAARHLAP----HDIPILSVNVGGHLGFLTHPRDL--------LQD-ESVWDRLQEDRYAIERRMMLQAR 128 (305)
T ss_pred HHHHHHHHHhcc----CCCCEEEEecCCcceEecCchhh--------cch-HHHHHHHHcCCceEEEeeEEEEE
Confidence 999999998864 4688888998 764444422110 112 67899999998765566655543
No 26
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.54 E-value=0.00064 Score=70.08 Aligned_cols=124 Identities=15% Similarity=0.119 Sum_probs=75.6
Q ss_pred CCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhh-ccCcEEEEEcCc
Q 009691 75 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEI-EKRLRLIVAGGD 152 (528)
Q Consensus 75 ~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~-~~~~~IIV~GGD 152 (528)
.+.+.+|.|+.. ....+++..+.+.|....+ +.+.. .....+. .. .. . ...+ .+. ++...||+.|||
T Consensus 5 ~~~i~iv~~~~~--~~~~~~~~~i~~~l~~~g~~v~~~~-~~~~~~~-~~-~~---~--~~~~-~~~~~~~d~vi~lGGD 73 (292)
T PRK03378 5 FKCIGIVGHPRH--PTALTTHEMLYHWLTSKGYEVIVEQ-QIAHELQ-LK-NV---K--TGTL-AEIGQQADLAIVVGGD 73 (292)
T ss_pred CCEEEEEEeCCC--HHHHHHHHHHHHHHHHCCCEEEEec-chhhhcC-cc-cc---c--ccch-hhcCCCCCEEEEECCc
Confidence 466899999755 5677788888888865443 21221 1110000 00 00 0 0000 011 124679999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeCCCCc-chhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEee
Q 009691 153 GTASWLLGVVSDLKLPHSPPVATVPLGTGN-NIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 224 (528)
Q Consensus 153 GTV~~Vl~~l~~~~~~~~~plgiIPlGTGN-DlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~ 224 (528)
||+..++..+.. . .+.+||.++|| +|...+.. +++.++|+.+.++....-.+..+..
T Consensus 74 GT~L~aa~~~~~----~--~~Pilgin~G~lGFl~~~~~---------~~~~~~l~~i~~g~~~i~~r~~L~~ 131 (292)
T PRK03378 74 GNMLGAARVLAR----Y--DIKVIGINRGNLGFLTDLDP---------DNALQQLSDVLEGHYISEKRFLLEA 131 (292)
T ss_pred HHHHHHHHHhcC----C--CCeEEEEECCCCCcccccCH---------HHHHHHHHHHHcCCceEEEEEEEEE
Confidence 999999988754 2 24578888888 77776652 3688899999998875555555543
No 27
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.46 E-value=0.047 Score=55.31 Aligned_cols=48 Identities=19% Similarity=0.292 Sum_probs=36.4
Q ss_pred CcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEEeCceeeEEeC
Q 009691 414 HGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLAT 471 (528)
Q Consensus 414 ~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~~~~v~mL~~ 471 (528)
.++.+-+.++|+|++.+ +..+++|||..... .++.|++++ ++++++.+
T Consensus 189 rpiVlp~~~~I~I~~~~----~~~l~iDGe~~~~~-----~~I~I~~s~-~~l~li~~ 236 (256)
T PRK14075 189 RSIVIPSNEKVTVESQR----DINLIVDGVLVGKT-----NRITVKKSR-RYVRILRP 236 (256)
T ss_pred CceEcCCCCEEEEEECC----ceEEEECCCCcCCC-----cEEEEEECC-CEEEEEEc
Confidence 44445578889998865 68899999986542 478899886 58999984
No 28
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]
Probab=97.21 E-value=0.0015 Score=67.88 Aligned_cols=63 Identities=24% Similarity=0.330 Sum_probs=44.3
Q ss_pred hhhhcc-C-cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcC
Q 009691 137 ASEIEK-R-LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNA 212 (528)
Q Consensus 137 a~~~~~-~-~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a 212 (528)
+++..+ . ..|+.+|||||..-|++++. .++||--||.||-|=++ .+-+. +++...++..+.++
T Consensus 93 ~r~~~~~gVdlIvfaGGDGTarDVa~av~-----~~vPvLGipaGvk~~Sg-vfA~~-------P~~aa~l~~~~lkg 157 (355)
T COG3199 93 VRRMVERGVDLIVFAGGDGTARDVAEAVG-----ADVPVLGIPAGVKNYSG-VFALS-------PEDAARLLGAFLKG 157 (355)
T ss_pred HHHHHhcCceEEEEeCCCccHHHHHhhcc-----CCCceEeeccccceecc-ccccC-------hHHHHHHHHHHhcc
Confidence 444433 3 46999999999999999983 46777778999966543 22222 24667778888777
No 29
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.05 E-value=0.0079 Score=62.17 Aligned_cols=121 Identities=19% Similarity=0.183 Sum_probs=70.5
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeec-C---chhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEK-A---PDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 150 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~-~---p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~G 150 (528)
+.+.||+|+.+ ..+.++++.+.+.|....+ +.+... . +.++.. ....+. + ......||++|
T Consensus 5 ~~v~iv~~~~k--~~a~e~~~~i~~~L~~~giev~v~~~~~~~~~~~~~~--~~~~~~-------~---~~~~d~vi~~G 70 (295)
T PRK01231 5 RNIGLIGRLGS--SSVVETLRRLKDFLLDRGLEVILDEETAEVLPGHGLQ--TVSRKL-------L---GEVCDLVIVVG 70 (295)
T ss_pred CEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEecchhhhcCccccc--ccchhh-------c---ccCCCEEEEEe
Confidence 45899999777 4667788888887754332 112111 0 100000 000000 0 01245799999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEee
Q 009691 151 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 224 (528)
Q Consensus 151 GDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~ 224 (528)
||||+..++..+.. ..+||--|.+|+ ||.-.. .+.+++.++|+.+.++...--.+..+..
T Consensus 71 GDGt~l~~~~~~~~----~~~Pvlgin~G~-------lGFl~~---~~~~~~~~~l~~~~~g~~~i~~r~~L~~ 130 (295)
T PRK01231 71 GDGSLLGAARALAR----HNVPVLGINRGR-------LGFLTD---IRPDELEFKLAEVLDGHYQEEERFLLEA 130 (295)
T ss_pred CcHHHHHHHHHhcC----CCCCEEEEeCCc-------cccccc---CCHHHHHHHHHHHHcCCceEEEEEEEEE
Confidence 99999999988753 456655567764 332221 1235788899999998865555555543
No 30
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2.7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....
Probab=96.91 E-value=0.0056 Score=62.82 Aligned_cols=69 Identities=20% Similarity=0.187 Sum_probs=49.2
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEE
Q 009691 142 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWH 221 (528)
Q Consensus 142 ~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~ 221 (528)
+.+.||++|||||+-.++..+.. ..+||--|++||- .|--.+.. .++..+++.+.+++...-.+..
T Consensus 76 ~~D~ii~lGGDGT~L~~~~~~~~----~~~Pilgin~G~l-gfl~~~~~---------~~~~~~l~~~~~g~~~~~~r~~ 141 (285)
T PF01513_consen 76 GVDLIIVLGGDGTFLRAARLFGD----YDIPILGINTGTL-GFLTEFEP---------EDIEEALEKILAGEYSIEERMR 141 (285)
T ss_dssp CSSEEEEEESHHHHHHHHHHCTT----ST-EEEEEESSSS-TSSSSEEG---------CGHHHHHHHHHHTHCEEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHhcc----CCCcEEeecCCCc-cccccCCH---------HHHHHHHHHHhcCCeEEEEeee
Confidence 45689999999999999988754 4678888899984 44333322 3688889998887766666655
Q ss_pred Eee
Q 009691 222 ILM 224 (528)
Q Consensus 222 V~~ 224 (528)
+..
T Consensus 142 l~~ 144 (285)
T PF01513_consen 142 LEV 144 (285)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 31
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.38 E-value=0.048 Score=56.18 Aligned_cols=123 Identities=18% Similarity=0.162 Sum_probs=70.9
Q ss_pred CCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhh-ccCcEEEEE
Q 009691 72 LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEI-EKRLRLIVA 149 (528)
Q Consensus 72 ~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~-~~~~~IIV~ 149 (528)
+...+.+.+|+|+.. ...+++..+.+.|...++ +.+.. .....+ . . .+..+ .+. ++.+.||+.
T Consensus 7 ~~~~~~i~ii~~~~~---~~~~~~~~i~~~l~~~g~~~~~~~-~~~~~~----~-~-----~~~~~-~~~~~~~Dlvi~i 71 (287)
T PRK14077 7 HKNIKKIGLVTRPNV---SLDKEILKLQKILSIYKVEILLEK-ESAEIL----D-L-----PGYGL-DELFKISDFLISL 71 (287)
T ss_pred cccCCEEEEEeCCcH---HHHHHHHHHHHHHHHCCCEEEEec-chhhhh----c-c-----cccch-hhcccCCCEEEEE
Confidence 344677999999863 677888888888865443 21221 111100 0 0 00000 011 134679999
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEe
Q 009691 150 GGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 223 (528)
Q Consensus 150 GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~ 223 (528)
|||||+-.++..+.. ..+||--|-+|+ ||.=. ..+.+++.++|+.+.+++...-.+..+.
T Consensus 72 GGDGT~L~aa~~~~~----~~~PilGIN~G~-------lGFLt---~~~~~~~~~~l~~i~~g~y~ie~r~~L~ 131 (287)
T PRK14077 72 GGDGTLISLCRKAAE----YDKFVLGIHAGH-------LGFLT---DITVDEAEKFFQAFFQGEFEIEKPYMLS 131 (287)
T ss_pred CCCHHHHHHHHHhcC----CCCcEEEEeCCC-------cccCC---cCCHHHHHHHHHHHHcCCCeEEEEEEEE
Confidence 999999888877654 345544456766 33321 1123578889999999875544444444
No 32
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.34 E-value=0.054 Score=56.07 Aligned_cols=127 Identities=16% Similarity=0.110 Sum_probs=71.0
Q ss_pred CCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeec--CchhHHHHHHHHHHHhhhccchhhhhh-ccCcEEEEEc
Q 009691 75 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEK--APDKVLHQLYVTLEKFKAAGDVFASEI-EKRLRLIVAG 150 (528)
Q Consensus 75 ~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~--~p~~~l~~~~~~l~~l~~~~~~~a~~~-~~~~~IIV~G 150 (528)
.+.+.+|.|+.. ....+++..+.+.|....+ +.+... .++.....-..... . . .. .+. +..+.||+.|
T Consensus 5 ~~~i~ii~~~~~--~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~---~-~~-~~~~~~~D~vi~lG 76 (296)
T PRK04539 5 FHNIGIVTRPNT--PDIQDTAHTLITFLKQHGFTVYLDEVGIKEGCIYTQDTVGCH-I---V-NK-TELGQYCDLVAVLG 76 (296)
T ss_pred CCEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEecccccccchhcccccccc-c---c-ch-hhcCcCCCEEEEEC
Confidence 567999999755 5677788888887765442 212210 00000000000000 0 0 00 011 1246799999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEe
Q 009691 151 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 223 (528)
Q Consensus 151 GDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~ 223 (528)
||||+-.++..+.. ..+||--|-+|+ ||.=.. ...+++.++|+.+.+++...-.+..+.
T Consensus 77 GDGT~L~aa~~~~~----~~~PilGIN~G~-------lGFL~~---~~~~~~~~~l~~i~~g~~~~~~r~~l~ 135 (296)
T PRK04539 77 GDGTFLSVAREIAP----RAVPIIGINQGH-------LGFLTQ---IPREYMTDKLLPVLEGKYLAEERILIE 135 (296)
T ss_pred CcHHHHHHHHHhcc----cCCCEEEEecCC-------CeEeec---cCHHHHHHHHHHHHcCCceEEEeeeEE
Confidence 99999998887654 345654467776 444321 123568889999998876555555544
No 33
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=96.32 E-value=0.047 Score=56.37 Aligned_cols=123 Identities=13% Similarity=0.093 Sum_probs=70.1
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhh-hhh-ccCcEEEEEcCc
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFA-SEI-EKRLRLIVAGGD 152 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a-~~~-~~~~~IIV~GGD 152 (528)
+.+.+|.|+.+ ....+++..+.+.|....+ +.+.... ...+. . ..+. .+. .+. +....||++|||
T Consensus 6 ~~v~iv~~~~~--~~~~e~~~~i~~~L~~~g~~v~v~~~~-~~~~~-~-~~~~-------~~~~~~~~~~~d~vi~~GGD 73 (291)
T PRK02155 6 KTVALIGRYQT--PGIAEPLESLAAFLAKRGFEVVFEADT-ARNIG-L-TGYP-------ALTPEEIGARADLAVVLGGD 73 (291)
T ss_pred CEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEecch-hhhcC-c-cccc-------ccChhHhccCCCEEEEECCc
Confidence 56888888755 5666778888887765432 2122110 00000 0 0000 000 011 124679999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEee
Q 009691 153 GTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 224 (528)
Q Consensus 153 GTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~ 224 (528)
||+..++..+.. ..+|+--|.+|+-.=|+ .+ ..+++.++|+.+.++...--.++.+.+
T Consensus 74 Gt~l~~~~~~~~----~~~pilGIn~G~lGFL~---~~-------~~~~~~~~l~~~~~g~~~i~~r~~L~~ 131 (291)
T PRK02155 74 GTMLGIGRQLAP----YGVPLIGINHGRLGFIT---DI-------PLDDMQETLPPMLAGNYEEEERMLLEA 131 (291)
T ss_pred HHHHHHHHHhcC----CCCCEEEEcCCCccccc---cC-------CHHHHHHHHHHHHcCCceEEEeEEEEE
Confidence 999999988754 34554446766632222 12 235788899999998866555665543
No 34
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.17 E-value=0.079 Score=55.10 Aligned_cols=129 Identities=17% Similarity=0.164 Sum_probs=70.9
Q ss_pred CCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhh--ccchhh--hhh-ccCcEEE
Q 009691 74 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKA--AGDVFA--SEI-EKRLRLI 147 (528)
Q Consensus 74 ~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~--~~~~~a--~~~-~~~~~II 147 (528)
+.+.+.+|.|+.. ....+++..+.+.|....+ +.+... ....+. ......-. +-.... ... +..+.||
T Consensus 4 ~~~~I~iv~~~~~--~~~~~~~~~l~~~L~~~g~~v~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~vi 77 (306)
T PRK03372 4 ASRRVLLVAHTGR--DEATEAARRVAKQLGDAGIGVRVLDA-EAVDLG---ATHPAPDDFRAMEVVDADPDAADGCELVL 77 (306)
T ss_pred CccEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEeec-hhhhhc---ccccccccccccccccchhhcccCCCEEE
Confidence 3467889988644 5667788888887765443 112111 001000 00000000 000000 011 1246799
Q ss_pred EEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEE
Q 009691 148 VAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHI 222 (528)
Q Consensus 148 V~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V 222 (528)
+.|||||+-.++..+.. ..+||--|.+|+= |.=.. .+.+++.++|+.+.++...--.+..+
T Consensus 78 ~lGGDGT~L~aar~~~~----~~~PilGIN~G~l-------GFL~~---~~~~~~~~~l~~i~~g~y~i~~R~~L 138 (306)
T PRK03372 78 VLGGDGTILRAAELARA----ADVPVLGVNLGHV-------GFLAE---AEAEDLDEAVERVVDRDYRVEERMTL 138 (306)
T ss_pred EEcCCHHHHHHHHHhcc----CCCcEEEEecCCC-------ceecc---CCHHHHHHHHHHHHcCCceEEEeeeE
Confidence 99999999998887654 4566666788873 33221 12357888999999998654454444
No 35
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=95.67 E-value=0.18 Score=52.19 Aligned_cols=126 Identities=13% Similarity=0.158 Sum_probs=68.3
Q ss_pred EEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHH-HHhhhccchhhhhh-ccCcEEEEEcCchH
Q 009691 78 VLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTL-EKFKAAGDVFASEI-EKRLRLIVAGGDGT 154 (528)
Q Consensus 78 llVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l-~~l~~~~~~~a~~~-~~~~~IIV~GGDGT 154 (528)
+.+|+|+.. ....++++.+.+.|....+ +.+.. .....+. ....+ .... ..+.. ... +....||+.|||||
T Consensus 3 igii~~~~~--~~~~~~~~~i~~~l~~~g~~v~~~~-~~~~~~~-~~~~~~~~~~-~~~~~-~~~~~~~dlvi~lGGDGT 76 (292)
T PRK01911 3 IAIFGQTYQ--ESASPYIQELFDELEERGAEVLIEE-KFLDFLK-QDLKFHPSYD-TFSDN-EELDGSADMVISIGGDGT 76 (292)
T ss_pred EEEEeCCCC--HHHHHHHHHHHHHHHHCCCEEEEec-chhhhhc-cccccccccc-cccch-hhcccCCCEEEEECCcHH
Confidence 678888744 5667788888887765443 22221 1000000 00000 0000 00000 011 13467999999999
Q ss_pred HHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEe
Q 009691 155 ASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 223 (528)
Q Consensus 155 V~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~ 223 (528)
+-.++..+.. ..+||--|-+|+ ||.=.. .+.+++.++|+.+.++...--.+..+.
T Consensus 77 ~L~aa~~~~~----~~~PilGIN~G~-------lGFLt~---~~~~~~~~~l~~i~~g~~~i~~r~~L~ 131 (292)
T PRK01911 77 FLRTATYVGN----SNIPILGINTGR-------LGFLAT---VSKEEIEETIDELLNGDYTIEERSLLQ 131 (292)
T ss_pred HHHHHHHhcC----CCCCEEEEecCC-------CCcccc---cCHHHHHHHHHHHHcCCceEEEEeeEE
Confidence 9988887654 345654467776 443221 123578889999999986555555544
No 36
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=95.49 E-value=0.17 Score=52.59 Aligned_cols=128 Identities=14% Similarity=0.066 Sum_probs=68.1
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHH---H-HHhhhccchhhhhh-ccCcEEEEE
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVT---L-EKFKAAGDVFASEI-EKRLRLIVA 149 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~---l-~~l~~~~~~~a~~~-~~~~~IIV~ 149 (528)
+.+.+|+|+.. ....+++..+.+.|....+ +.+.. .....+. .... + ..-..+. .. ... +..+.||+.
T Consensus 2 ~~igiv~n~~~--~~~~~~~~~l~~~L~~~g~~v~~~~-~~~~~~~-~~~~~~~~~~~~~~~~-~~-~~~~~~~Dlvi~i 75 (305)
T PRK02649 2 PKAGIIYNDGK--PLAVRTAEELQDKLEAAGWEVVRAS-SSGGILG-YANPDQPVCHTGIDQL-VP-PGFDSSMKFAIVL 75 (305)
T ss_pred CEEEEEEcCCC--HHHHHHHHHHHHHHHHCCCEEEEec-chhhhcC-cccccccccccccccc-Ch-hhcccCcCEEEEE
Confidence 45888889744 5677788888888765443 22221 1000000 0000 0 0000000 00 011 124679999
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEe
Q 009691 150 GGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 223 (528)
Q Consensus 150 GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~ 223 (528)
|||||+-.++..+.. ..+||--|-+|+ ||.=.. ...+++.++|+.+.++...--.+-.+.
T Consensus 76 GGDGTlL~aar~~~~----~~iPilGIN~G~-------lGFLt~---~~~~~~~~~l~~l~~g~y~ie~r~~L~ 135 (305)
T PRK02649 76 GGDGTVLSAARQLAP----CGIPLLTINTGH-------LGFLTE---AYLNQLDEAIDQVLAGQYTIEERTMLT 135 (305)
T ss_pred eCcHHHHHHHHHhcC----CCCcEEEEeCCC-------Cccccc---CCHHHHHHHHHHHHcCCcEEEEeeeEE
Confidence 999999998887654 345544456665 342111 123578889999999876544444443
No 37
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=95.49 E-value=0.23 Score=54.71 Aligned_cols=130 Identities=18% Similarity=0.197 Sum_probs=67.5
Q ss_pred CCCeEEEEEcCcCCCCChhhHHHHHHHHhcc---CcEEEEeecCchhHHHH--HHHHHHHhhhccchhhhhh-ccCcEEE
Q 009691 74 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNE---NQVIDLGEKAPDKVLHQ--LYVTLEKFKAAGDVFASEI-EKRLRLI 147 (528)
Q Consensus 74 ~~~pllVivNPkSGg~~g~~ll~~~~~~L~~---~qV~dL~~~~p~~~l~~--~~~~l~~l~~~~~~~a~~~-~~~~~II 147 (528)
+.+.++||.||.. ....+++..+.+.|.. .+|+- .. .....+.. ........-..... ..+. ...+.||
T Consensus 193 ~p~~VgIV~n~~k--~~a~el~~~I~~~L~~~~gi~V~v-e~-~~a~~l~~~~~~~~~~~~~~~~~~-~~~l~~~~DlVI 267 (508)
T PLN02935 193 DPQTVLIITKPNS--TSVRVLCAEMVRWLREQKGLNIYV-EP-RVKKELLSESSYFNFVQTWEDEKE-ILLLHTKVDLVI 267 (508)
T ss_pred CCCEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCEEEE-ec-hhhhhhccccccccccccccccch-hhhcccCCCEEE
Confidence 3577999999865 4666778888887752 33432 11 00000000 00000000000000 0001 1246799
Q ss_pred EEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEE
Q 009691 148 VAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHI 222 (528)
Q Consensus 148 V~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V 222 (528)
++|||||+-+++..+.. ..+||--|.+|+ ||.=.. ....++.++|+.|.++...--.+-.+
T Consensus 268 siGGDGTlL~Aar~~~~----~~iPILGIN~G~-------LGFLt~---i~~~e~~~~Le~il~G~y~Ie~R~~L 328 (508)
T PLN02935 268 TLGGDGTVLWAASMFKG----PVPPVVPFSMGS-------LGFMTP---FHSEQYRDCLDAILKGPISITLRHRL 328 (508)
T ss_pred EECCcHHHHHHHHHhcc----CCCcEEEEeCCC-------cceecc---cCHHHHHHHHHHHHcCCceEEEEeEE
Confidence 99999999999887654 345544456665 222111 12356888999999987543334333
No 38
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=95.37 E-value=0.23 Score=50.62 Aligned_cols=105 Identities=10% Similarity=0.056 Sum_probs=63.2
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 155 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV 155 (528)
+.+.+|.|+.. .+.++++.++++|....+-.... . .+.+.||+.|||||+
T Consensus 3 ~~i~iv~~~~~---~a~~~~~~l~~~l~~~g~~~~~~--~-------------------------~~~D~vi~lGGDGT~ 52 (264)
T PRK03501 3 RNLFFFYKRDK---ELVEKVKPLKKIAEEYGFTVVDH--P-------------------------KNANIIVSIGGDGTF 52 (264)
T ss_pred cEEEEEECCCH---HHHHHHHHHHHHHHHCCCEEEcC--C-------------------------CCccEEEEECCcHHH
Confidence 45778888666 66678888888776544311110 0 123569999999999
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeC-CCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEe
Q 009691 156 SWLLGVVSDLKLPHSPPVATVPL-GTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 223 (528)
Q Consensus 156 ~~Vl~~l~~~~~~~~~plgiIPl-GTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~ 223 (528)
-.++..+... ..+|+--|.+ |+ ||.=.. .+.+++.++++.+.+++..--.+..+.
T Consensus 53 L~a~~~~~~~---~~~pilgIn~~G~-------lGFL~~---~~~~~~~~~l~~i~~g~~~~~~r~~l~ 108 (264)
T PRK03501 53 LQAVRKTGFR---EDCLYAGISTKDQ-------LGFYCD---FHIDDLDKMIQAITKEEIEVRKYPTIE 108 (264)
T ss_pred HHHHHHhccc---CCCeEEeEecCCC-------CeEccc---CCHHHHHHHHHHHHcCCcEEEEeeeEE
Confidence 8888765431 2455333455 53 333211 123578889999998876544444443
No 39
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=94.49 E-value=0.42 Score=48.58 Aligned_cols=74 Identities=14% Similarity=0.135 Sum_probs=40.7
Q ss_pred EEEEEecchh-HHHHHHhcCCCcceEEEecEEEEEEccCC--CcceeeeecCCcCCCCCCCCCccEEEEEEeCceeeEEe
Q 009691 394 LEIVGFRDAW-HGLVLLAPNGHGTRLAQANRVRFEFEKGA--ADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVNMLA 470 (528)
Q Consensus 394 LEVv~v~~~~-~~~~ll~~~~~~~rl~Q~~~V~I~~~~~~--~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~~~~v~mL~ 470 (528)
++++.+..+. |..........++-+-....|+|++.... .....+.+||+......+ .+.+.|+.+. ..+++++
T Consensus 164 ~~~~~itPI~Ph~~~~~~~~~rplVl~~~~~I~i~~~~~~~~~~~~~l~~DG~~~~~l~~--~d~v~i~~s~-~~~~~~v 240 (259)
T PRK00561 164 IDVIQIIELNPLLHPNQTTIQSPIILPIDTKVEFEIKKAFDHDQFPRFYADGAKLRLGNS--DTTIEISLVR-SQAMFVA 240 (259)
T ss_pred CCeEEEEeeCCCCcccccccCCCeEECCCCEEEEEEccCCCCCCcEEEEEcCCeeecCCC--CCEEEEEEcC-ccceEEE
Confidence 6677776653 21111111235556666777888775411 124678999999865321 1236666664 3677433
No 40
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=94.37 E-value=0.36 Score=49.29 Aligned_cols=98 Identities=15% Similarity=0.138 Sum_probs=59.1
Q ss_pred EEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHH
Q 009691 78 VLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASW 157 (528)
Q Consensus 78 llVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~ 157 (528)
+.+|.|+ ..++.++.+.+++.|....+ .+.. ++.+.||+.|||||+-.
T Consensus 3 i~Ii~~~---~~~~~~~~~~l~~~l~~~g~-~~~~----------------------------~~~Dlvi~iGGDGT~L~ 50 (265)
T PRK04885 3 VAIISNG---DPKSKRVASKLKKYLKDFGF-ILDE----------------------------KNPDIVISVGGDGTLLS 50 (265)
T ss_pred EEEEeCC---CHHHHHHHHHHHHHHHHcCC-ccCC----------------------------cCCCEEEEECCcHHHHH
Confidence 5666663 34566778888877764332 1100 12356999999999988
Q ss_pred HHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeE
Q 009691 158 LLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDS 219 (528)
Q Consensus 158 Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~ 219 (528)
.+..+... ...+|+--|.+|+-.=|+ .+ +.+++.++++.+.+++.....+
T Consensus 51 a~~~~~~~--~~~iPilGIN~G~lGFL~---~~-------~~~~~~~~l~~i~~g~y~i~~r 100 (265)
T PRK04885 51 AFHRYENQ--LDKVRFVGVHTGHLGFYT---DW-------RPFEVDKLVIALAKDPGQVVSY 100 (265)
T ss_pred HHHHhccc--CCCCeEEEEeCCCceecc---cC-------CHHHHHHHHHHHHcCCceEEEE
Confidence 88766531 124554446666532222 11 1246888999999987554444
No 41
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=93.72 E-value=0.64 Score=52.48 Aligned_cols=66 Identities=17% Similarity=0.303 Sum_probs=44.4
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEE
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHI 222 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V 222 (528)
...||+.|||||+-.++..+.. ..+||--|-+|+ ||.=.. ...+++.++|+.+.+++..--.+-.+
T Consensus 349 ~dlvi~lGGDGT~L~aa~~~~~----~~~PilGin~G~-------lGFL~~---~~~~~~~~~l~~~~~g~~~i~~r~~L 414 (569)
T PRK14076 349 ISHIISIGGDGTVLRASKLVNG----EEIPIICINMGT-------VGFLTE---FSKEEIFKAIDSIISGEYEIEKRTKL 414 (569)
T ss_pred CCEEEEECCcHHHHHHHHHhcC----CCCCEEEEcCCC-------CCcCcc---cCHHHHHHHHHHHHcCCceEEEeEEE
Confidence 3579999999999998887654 356655578887 333221 12357888999999987654344333
No 42
>PLN02727 NAD kinase
Probab=92.96 E-value=0.65 Score=54.47 Aligned_cols=124 Identities=17% Similarity=0.141 Sum_probs=64.9
Q ss_pred CCCCeEEEEEcCcCCCCChhhHHHHHHHHhccC-cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhh-ccCcEEEEEc
Q 009691 73 IPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN-QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEI-EKRLRLIVAG 150 (528)
Q Consensus 73 ~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~-qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~-~~~~~IIV~G 150 (528)
.|.+.|+||.+++. .....+..+.+.|... .+-.+.+....+.+... ..+.....-...-..+. ...+.||+.|
T Consensus 676 ~p~rtVgIV~K~~~---ea~~~~~eL~~~L~~~~gi~V~VE~~~a~~l~~~-~~~~~~~~~~~~~~~el~~~~DLVIvLG 751 (986)
T PLN02727 676 STPKTVLLLKKLGQ---ELMEEAKEVASFLYHQEKMNVLVEPDVHDIFARI-PGFGFVQTFYSQDTSDLHERVDFVACLG 751 (986)
T ss_pred CCCCEEEEEcCCcH---HHHHHHHHHHHHHHhCCCeEEEEecchHHHhhcc-ccccccceecccchhhcccCCCEEEEEC
Confidence 35688999999876 4556667777777653 33111111111111000 00000000000000011 1246799999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCe
Q 009691 151 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKE 214 (528)
Q Consensus 151 GDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~ 214 (528)
||||+-.++..+.. ..+||--|-+|+ ||.=. ..+..++.+.|+.|.++..
T Consensus 752 GDGTlLrAar~~~~----~~iPILGINlGr-------LGFLT---di~~ee~~~~L~~Il~G~y 801 (986)
T PLN02727 752 GDGVILHASNLFRG----AVPPVVSFNLGS-------LGFLT---SHYFEDFRQDLRQVIHGNN 801 (986)
T ss_pred CcHHHHHHHHHhcC----CCCCEEEEeCCC-------ccccc---cCCHHHHHHHHHHHHcCCc
Confidence 99999999887654 345655567775 44321 1123467788888887763
No 43
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=91.74 E-value=2.3 Score=43.58 Aligned_cols=113 Identities=20% Similarity=0.201 Sum_probs=61.2
Q ss_pred EEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 009691 78 VLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 156 (528)
Q Consensus 78 llVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~ 156 (528)
+.+|+|+.. ....+++..+.+.|. .++ +.+.. .....+. . ..... .+. +.+.||+.|||||+-
T Consensus 3 i~iv~~~~~--~~~~~~~~~i~~~l~-~g~~~~~~~-~~~~~~~-----~-----~~~~~-~~~-~~D~vi~lGGDGT~L 66 (271)
T PRK01185 3 VAFVIRKDC--KRCIKIAKSIIELLP-PDWEIIYEM-EAAKALG-----M-----DGLDI-EEI-NADVIITIGGDGTIL 66 (271)
T ss_pred EEEEecCCC--HHHHHHHHHHHHHHh-cCCEEEEec-hhhhhcC-----c-----ccCcc-ccc-CCCEEEEEcCcHHHH
Confidence 778888744 466677888888773 332 21221 1111100 0 00000 011 346799999999987
Q ss_pred HHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEe
Q 009691 157 WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 223 (528)
Q Consensus 157 ~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~ 223 (528)
.++..+ ..|.+| |-+|+= |.=.. ...+++.++|+.+.++...--.+..+.
T Consensus 67 ~a~~~~------~~PilG-IN~G~l-------GFL~~---~~~~~~~~~l~~i~~g~~~i~~r~~L~ 116 (271)
T PRK01185 67 RTLQRA------KGPILG-INMGGL-------GFLTE---IEIDEVGSAIKKLIRGEYFIDERMKLK 116 (271)
T ss_pred HHHHHc------CCCEEE-EECCCC-------ccCcc---cCHHHHHHHHHHHHcCCcEEEEeeEEE
Confidence 666542 124444 477753 33221 123578889999999876544455444
No 44
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=90.97 E-value=1.4 Score=45.27 Aligned_cols=67 Identities=19% Similarity=0.244 Sum_probs=40.5
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHc-CCeeeEeEEE
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN-AKEMQIDSWH 221 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~-a~~~~iD~w~ 221 (528)
...||+.|||||+-.++..+.. ..+||--|-+|+ ||.=.. ...+++.+.+..+.+ +...--.+..
T Consensus 43 ~d~vi~iGGDGT~L~aa~~~~~----~~~PilgIn~G~-------lGFL~~---~~~~~~~~~l~~~~~~g~~~i~~r~~ 108 (272)
T PRK02231 43 AQLAIVIGGDGNMLGRARVLAK----YDIPLIGINRGN-------LGFLTD---IDPKNAYEQLEACLERGEFFVEERFL 108 (272)
T ss_pred CCEEEEECCcHHHHHHHHHhcc----CCCcEEEEeCCC-------Cccccc---CCHHHHHHHHHHHHhcCCceEEEeee
Confidence 4679999999999888877654 345543357777 443221 122456667777666 6544334444
Q ss_pred Ee
Q 009691 222 IL 223 (528)
Q Consensus 222 V~ 223 (528)
+.
T Consensus 109 L~ 110 (272)
T PRK02231 109 LE 110 (272)
T ss_pred EE
Confidence 43
No 45
>PLN02929 NADH kinase
Probab=90.14 E-value=1.7 Score=45.18 Aligned_cols=70 Identities=20% Similarity=0.148 Sum_probs=44.9
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCC---------cch--hhccCCCCCCCCChhHHHHHHHHHHH
Q 009691 142 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG---------NNI--PFSFGWGKKNPNTDQQAVLSFLEQVK 210 (528)
Q Consensus 142 ~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTG---------NDl--AR~LGwg~~~~~~~~~~~~~~l~~I~ 210 (528)
..+.||++|||||+-.++..+ . ..+||-=|-.|+. |.| .|++|.=.. ...+++.++|+.+.
T Consensus 64 ~~Dlvi~lGGDGT~L~aa~~~-~----~~iPvlGIN~Gp~~~~~~~~~~~~~~~~r~lGfL~~---~~~~~~~~~L~~il 135 (301)
T PLN02929 64 DVDLVVAVGGDGTLLQASHFL-D----DSIPVLGVNSDPTQKDEVEEYSDEFDARRSTGHLCA---ATAEDFEQVLDDVL 135 (301)
T ss_pred CCCEEEEECCcHHHHHHHHHc-C----CCCcEEEEECCCcccccccccccccccccCcccccc---CCHHHHHHHHHHHH
Confidence 346799999999998888766 3 3455444577742 222 346664321 22457889999999
Q ss_pred cCCeeeEeE
Q 009691 211 NAKEMQIDS 219 (528)
Q Consensus 211 ~a~~~~iD~ 219 (528)
+|....-.+
T Consensus 136 ~g~~~~~~r 144 (301)
T PLN02929 136 FGRLKPTEL 144 (301)
T ss_pred cCCceEEEe
Confidence 987544343
No 46
>PF10254 Pacs-1: PACS-1 cytosolic sorting protein; InterPro: IPR019381 PACS-1 is a cytosolic sorting protein that directs the localisation of membrane proteins in the trans-Golgi network (TGN)/endosomal system. PACS-1 connects the clathrin adaptor AP-1 to acidic cluster sorting motifs contained in the cytoplasmic domain of cargo proteins such as furin, the cation-independent mannose-6-phosphate receptor and in viral proteins such as human immunodeficiency virus type 1 Nef [].
Probab=88.50 E-value=1.7 Score=47.01 Aligned_cols=48 Identities=21% Similarity=0.280 Sum_probs=37.1
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCC------CCCCEEEeeCCCCcchhhccCC
Q 009691 142 KRLRLIVAGGDGTASWLLGVVSDLKLP------HSPPVATVPLGTGNNIPFSFGW 190 (528)
Q Consensus 142 ~~~~IIV~GGDGTV~~Vl~~l~~~~~~------~~~plgiIPlGTGNDlAR~LGw 190 (528)
...+|+|+|||-=++.||....++-.. .-.-+-+||+|+ |.+||.||=
T Consensus 75 ~~vKV~v~G~~~y~~~VLr~yVE~Ls~K~~dWl~~~rFlvIPlGs-~~varyLgs 128 (414)
T PF10254_consen 75 PPVKVAVAGGQSYLSAVLRAYVEQLSHKPPDWLNYLRFLVIPLGS-HPVARYLGS 128 (414)
T ss_pred CceEEEEEccHHHHHHHHHHHHHHhccCCcccccceeEEEecCCC-CHHHHHHhc
Confidence 356899999999999999976653111 123378899999 999999973
No 47
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=87.79 E-value=0.73 Score=46.53 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=25.4
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCC
Q 009691 142 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGT 180 (528)
Q Consensus 142 ~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGT 180 (528)
+.+.||+.|||||+-.++..... ..+||--|.+|+
T Consensus 25 ~~Dlvi~iGGDGTlL~a~~~~~~----~~~PvlGIN~G~ 59 (246)
T PRK04761 25 EADVIVALGGDGFMLQTLHRYMN----SGKPVYGMNRGS 59 (246)
T ss_pred cCCEEEEECCCHHHHHHHHHhcC----CCCeEEEEeCCC
Confidence 34679999999999888876544 345654467775
No 48
>COG0061 nadF NAD kinase [Coenzyme metabolism]
Probab=84.93 E-value=4.8 Score=41.36 Aligned_cols=70 Identities=19% Similarity=0.247 Sum_probs=47.7
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEE
Q 009691 142 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWH 221 (528)
Q Consensus 142 ~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~ 221 (528)
..+.|++.|||||+-.++..... ..+|+--|-.|+ ||.=..+ ....++++++.+.+++.+..-+..
T Consensus 55 ~~d~ivvlGGDGtlL~~~~~~~~----~~~pilgin~G~-------lGFLt~~---~~~~~~~~~~~~~~~~~~~~~r~~ 120 (281)
T COG0061 55 KADLIVVLGGDGTLLRAARLLAR----LDIPVLGINLGH-------LGFLTDF---EPDELEKALDALLEGEYRIEERLL 120 (281)
T ss_pred CceEEEEeCCcHHHHHHHHHhcc----CCCCEEEEeCCC-------ccccccc---CHHHHHHHHHHHhcCceEEEEeEE
Confidence 34679999999999999987765 335554445553 3332211 135788999999888777777777
Q ss_pred Eeee
Q 009691 222 ILMR 225 (528)
Q Consensus 222 V~~~ 225 (528)
+...
T Consensus 121 l~~~ 124 (281)
T COG0061 121 LEVS 124 (281)
T ss_pred EEEE
Confidence 7654
No 49
>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes neomycin, kanamycin, gentamicin, and ribostamycin. They are important antibacterial agents. DOIS is a homologue of the dehydroquinate synthase which catalyzes the cyclization of 3-deoxy-D-arabino-heputulosonate-7-phosphate to dehydroquinate (DHQ) in the shikimate pathway.
Probab=80.80 E-value=6.2 Score=41.93 Aligned_cols=96 Identities=18% Similarity=0.222 Sum_probs=49.5
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccC----cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 151 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~----qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GG 151 (528)
++++|+..+..- ..+...+.+.|... .++.+....+...++.+.+.++.+++. ...+...||++||
T Consensus 24 ~rvlvVtd~~v~----~~~~~~l~~~L~~~g~~~~~~~~~~~e~~k~~~~v~~~~~~~~~~------~~dr~~~IIAvGG 93 (355)
T cd08197 24 DKYLLVTDSNVE----DLYGHRLLEYLREAGAPVELLSVPSGEEHKTLSTLSDLVERALAL------GATRRSVIVALGG 93 (355)
T ss_pred CeEEEEECccHH----HHHHHHHHHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHc------CCCCCcEEEEECC
Confidence 567888775432 22455666666432 223333222222233232322222211 0112235666765
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcc
Q 009691 152 DGTASWLLGVVSDLKLPHSPPVATVPL--GTGNN 183 (528)
Q Consensus 152 DGTV~~Vl~~l~~~~~~~~~plgiIPl--GTGND 183 (528)
|++.-+...+... ....+|+..||- ||+.|
T Consensus 94 -Gsv~D~ak~~A~~-~~rgip~I~IPTTlla~~d 125 (355)
T cd08197 94 -GVVGNIAGLLAAL-LFRGIRLVHIPTTLLAQSD 125 (355)
T ss_pred -cHHHHHHHHHHHH-hccCCCEEEecCccccccc
Confidence 8999888876532 124678999998 66666
No 50
>cd08180 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism. 1,3-propanediol dehydrogenase (PPD) plays a role in glycerol metabolism of some bacteria in anaerobic conditions. In this degradation pathway, glycerol is converted in a two-step process to 1,3-propanediol (1,3-PD) which is then excreted into the extracellular medium. The first reaction involves the transformation of glycerol into 3-hydroxypropionaldehyde (3-HPA) by a coenzyme B-12-dependent dehydratase. The second reaction involves the dismutation of the 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol by the NADH-linked 1,3-propanediol dehydrogenase (PPD). The enzyme require iron ion for its function. Because many genes in this pathway are present in the pdu (propanediol utilisation) operon, they are also named pdu genes. PPD is a member of the iron-containing alcohol dehydrogenase superfamily. The PPD structure has a dehydroquinat
Probab=78.04 E-value=12 Score=39.04 Aligned_cols=44 Identities=23% Similarity=0.288 Sum_probs=27.3
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC----CCCCCCCEEEeeC--CCCcchhhc
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDL----KLPHSPPVATVPL--GTGNNIPFS 187 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~----~~~~~~plgiIPl--GTGNDlAR~ 187 (528)
.+.||++|| |++..+...+.-+ .....+|+..||- |||--....
T Consensus 79 ~d~IiaiGG-Gs~~D~aKa~a~~~~~~~~~~~~p~i~VPTtagtgse~t~~ 128 (332)
T cd08180 79 PDIVIALGG-GSAIDAAKAIIYFAKKLGKKKKPLFIAIPTTSGTGSEVTSF 128 (332)
T ss_pred CCEEEEECC-chHHHHHHHHHHHHhCCCCCCCCCEEEeCCCCcchHhhCCe
Confidence 467888888 6777666644211 1124578999994 777555443
No 51
>cd08169 DHQ-like Dehydroquinate synthase-like which includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. Dehydroquinate synthase-like. This group contains dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. They exhibit the dehydroquinate synthase structural fold. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes ne
Probab=74.80 E-value=13 Score=39.24 Aligned_cols=97 Identities=16% Similarity=0.204 Sum_probs=50.5
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhcc---CcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNE---NQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 152 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~---~qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGD 152 (528)
++++|+..+..-. .+.+.+.+.|.. ..++.+....+...++.+.+.++.+.+.+ ..+...||++||
T Consensus 24 ~k~livtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~~e~~k~~~~v~~~~~~~~~~~------~~r~d~IIaiGG- 92 (344)
T cd08169 24 DQYFFISDSGVAD----LIAHYIAEYLSKILPVHILVIEGGEEYKTFETVTRILERAIALG------ANRRTAIVAVGG- 92 (344)
T ss_pred CeEEEEECccHHH----HHHHHHHHHHHhhcCceEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCcEEEEECC-
Confidence 5677777654422 355666666643 23333333222222332222222222111 122345777766
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcch
Q 009691 153 GTASWLLGVVSDLKLPHSPPVATVPL--GTGNNI 184 (528)
Q Consensus 153 GTV~~Vl~~l~~~~~~~~~plgiIPl--GTGNDl 184 (528)
|++.-+...+..+ ....+|+-.||- ++++|-
T Consensus 93 Gsv~D~ak~vA~~-~~rgip~i~VPTTlla~~ds 125 (344)
T cd08169 93 GATGDVAGFVAST-LFRGIAFIRVPTTLLAQSDS 125 (344)
T ss_pred cHHHHHHHHHHHH-hccCCcEEEecCCccccccc
Confidence 8888888776542 124678999997 677663
No 52
>cd08179 NADPH_BDH NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria. NADPH-dependent butanol dehydrogenase (BDH) is involved in the butanol and ethanol formation pathway of some bacteria. The fermentation process is characterized by an acid producing growth phase, followed by a solvent producing phase. The latter phase is associated with the induction of solventogenic enzymes such as butanol dehydrogenase. The activity of the enzymes require NADPH as cofactor, as well as divalent ions zinc or iron. This family is a member of the iron-containing alcohol dehydrogenase superfamily. Protein structure has a dehydroquinate synthase-like fold.
Probab=74.67 E-value=14 Score=39.25 Aligned_cols=46 Identities=17% Similarity=0.159 Sum_probs=27.2
Q ss_pred CcEEEEEcCchHHHHHHHHHhc---C------------C---CCCCCCEEEeeC--CCCcchhhccC
Q 009691 143 RLRLIVAGGDGTASWLLGVVSD---L------------K---LPHSPPVATVPL--GTGNNIPFSFG 189 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~---~------------~---~~~~~plgiIPl--GTGNDlAR~LG 189 (528)
.+.||++|| |++.-+...+.- . + ....+|+..||- |||--..+.--
T Consensus 82 ~D~IIavGG-GSviD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~p~iaIPTtagTGSE~t~~av 147 (375)
T cd08179 82 PDWIIALGG-GSPIDAAKAMWIFYEYPELTFEDIVKPFTLPELRNKARFCAIPSTSGTATEVTAFSV 147 (375)
T ss_pred CCEEEEeCC-ccHHHHHHHHHHHHhCCCcCHHHHhccccccccCCCCCEEEeCCCCchhHhhCCeEE
Confidence 456888888 666666655431 0 0 012468888886 78765554443
No 53
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=72.39 E-value=17 Score=34.03 Aligned_cols=81 Identities=14% Similarity=0.233 Sum_probs=43.9
Q ss_pred CCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC
Q 009691 87 GGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL 165 (528)
Q Consensus 87 Gg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~ 165 (528)
|+..-..+.++.+..|....+ |++.........+++...++.+... .-...|.++|+++-+.-++.++..
T Consensus 8 gs~SD~~~~~~a~~~L~~~gi~~~~~V~saHR~p~~l~~~~~~~~~~--------~~~viIa~AG~~a~Lpgvva~~t~- 78 (150)
T PF00731_consen 8 GSTSDLPIAEEAAKTLEEFGIPYEVRVASAHRTPERLLEFVKEYEAR--------GADVIIAVAGMSAALPGVVASLTT- 78 (150)
T ss_dssp SSGGGHHHHHHHHHHHHHTT-EEEEEE--TTTSHHHHHHHHHHTTTT--------TESEEEEEEESS--HHHHHHHHSS-
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHhccC--------CCEEEEEECCCcccchhhheeccC-
Confidence 555555677788888877665 6665433222222232222211110 113568999999999999988764
Q ss_pred CCCCCCCEEEeeCCCC
Q 009691 166 KLPHSPPVATVPLGTG 181 (528)
Q Consensus 166 ~~~~~~plgiIPlGTG 181 (528)
.|.||+ |.-++
T Consensus 79 ----~PVIgv-P~~~~ 89 (150)
T PF00731_consen 79 ----LPVIGV-PVSSG 89 (150)
T ss_dssp ----S-EEEE-EE-ST
T ss_pred ----CCEEEe-ecCcc
Confidence 466776 87665
No 54
>TIGR03405 Phn_Fe-ADH phosphonate metabolism-associated iron-containing alcohol dehydrogenase. 2-hydroxyethylphosphonate (2-HEP), the presumed product of the reaction of Pald with an alcohol dehydrogenase, is a biologically novel but reasonable analog of 2-AEP and may be a constituent of as-yet undescribed natural products. In the case of Azoarcus, downstream of the dehydrogenase is a CDP-glycerol:glycerophosphate transferase homolog that may indicate the existence of a pathway for 2-HEP-derived phosphonolipid biosynthesis.
Probab=71.71 E-value=23 Score=37.45 Aligned_cols=102 Identities=19% Similarity=0.128 Sum_probs=51.9
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhh-ccCcEEEEEcCchH
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEI-EKRLRLIVAGGDGT 154 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~-~~~~~IIV~GGDGT 154 (528)
++++|+..+.. ....+++.+...|....++.+....+..-++.+.+..+.++ +. .+.+.||++|| |+
T Consensus 24 ~r~lvVtd~~~---~~~g~~~~v~~~L~~~~~~~~~~v~~~pt~~~v~~~~~~~~--------~~~~~~D~IIaiGG-GS 91 (355)
T TIGR03405 24 RRVVVVTFPEA---RALGLARRLEALLGGRLAALIDDVAPNPDVAQLDGLYARLW--------GDEGACDLVIALGG-GS 91 (355)
T ss_pred CeEEEEECcch---hhcchHHHHHHHhccCcEEEeCCCCCCcCHHHHHHHHHHHH--------hcCCCCCEEEEeCC-cc
Confidence 67888776433 22245666777775433322222222222222222222111 11 12456888887 77
Q ss_pred HHHHHHHHhcC---------------C----CCCCCCEEEeeC--CCCcchhhccC
Q 009691 155 ASWLLGVVSDL---------------K----LPHSPPVATVPL--GTGNNIPFSFG 189 (528)
Q Consensus 155 V~~Vl~~l~~~---------------~----~~~~~plgiIPl--GTGNDlAR~LG 189 (528)
+.-+...+.-+ . ....+|+..||- |||-...+.--
T Consensus 92 viD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~P~IaVPTTagTGSE~t~~av 147 (355)
T TIGR03405 92 VIDTAKVLAVGLRRGEFDLLLQLLRNGRDFAPTARLPLVAIPTTAGTGSEVTPWAT 147 (355)
T ss_pred HHHHHHHHHHHHhCCCcccHHHHHhcCCccCCCCCCCEEEEcCCCcchhhhcCeEE
Confidence 77666544221 0 113468888885 78876666543
No 55
>cd08195 DHQS Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway, which involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds, is found in bacteria, microbial eukaryotes, and plants, but not in mammals. Therefore, enzymes of this pathway are attractive targets for the development of non-toxic antimicrobial compounds, herbicides and anti-parasitic agents. The activity of DHQS requires nicotinamide adenine dinucleotide (NAD) as cofactor. A single active site in DHQS catalyzes five sequential reactions involving alcohol oxidation, phosphate elimination, carbonyl reduction, ring opening, and intramolecular aldol
Probab=69.46 E-value=16 Score=38.46 Aligned_cols=91 Identities=20% Similarity=0.308 Sum_probs=48.5
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccC----cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 151 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~----qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GG 151 (528)
++++|+..+..-. .+.+.+++.|... .++.+....+...++.+.+.++.+++.+ ..+...||++||
T Consensus 25 ~~~livtd~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~~e~~~~~~~v~~~~~~~~~~~------~~r~d~IIaiGG 94 (345)
T cd08195 25 SKILIVTDENVAP----LYLEKLKAALEAAGFEVEVIVIPAGEASKSLETLEKLYDALLEAG------LDRKSLIIALGG 94 (345)
T ss_pred CeEEEEECCchHH----HHHHHHHHHHHhcCCceEEEEeCCCCCcCCHHHHHHHHHHHHHcC------CCCCCeEEEECC
Confidence 6788888765532 3566677766542 2233332223333333333333222110 112345777776
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 152 DGTASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 152 DGTV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
|++.-+...+... ....+|+..||-
T Consensus 95 -Gsv~D~ak~vA~~-~~rgip~i~VPT 119 (345)
T cd08195 95 -GVVGDLAGFVAAT-YMRGIDFIQIPT 119 (345)
T ss_pred -hHHHhHHHHHHHH-HhcCCCeEEcch
Confidence 8888888776531 124678888884
No 56
>PRK09860 putative alcohol dehydrogenase; Provisional
Probab=65.79 E-value=35 Score=36.55 Aligned_cols=126 Identities=13% Similarity=0.141 Sum_probs=62.3
Q ss_pred cccccCceeccCCc-c---cccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE--EEEeecCchhHHHHHHHHH
Q 009691 53 NYYIPNYILVSGSE-V---QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV--IDLGEKAPDKVLHQLYVTL 126 (528)
Q Consensus 53 ~~~ip~~~~~~~~~-~---~~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV--~dL~~~~p~~~l~~~~~~l 126 (528)
.|.+|.+++..... . ........++++|+.-+. -....++..+++.|....+ .......|+.-.+.+.+.+
T Consensus 5 ~~~~p~~i~~G~g~~~~l~~~~~~~g~~~~livt~~~---~~~~g~~~~v~~~L~~~~i~~~~f~~v~~np~~~~v~~~~ 81 (383)
T PRK09860 5 TFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDNM---LTKLGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGL 81 (383)
T ss_pred ccccCCeEEECcCHHHHHHHHHHhcCCCEEEEEcCcc---hhhCccHHHHHHHHHHcCCeEEEeCCCCCCcCHHHHHHHH
Confidence 45678887665432 1 111222336677665321 1223356677777764432 2222222222223233332
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhc---C-----------C-CCCCCCEEEeeC--CCCcchhhccC
Q 009691 127 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSD---L-----------K-LPHSPPVATVPL--GTGNNIPFSFG 189 (528)
Q Consensus 127 ~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~---~-----------~-~~~~~plgiIPl--GTGNDlAR~LG 189 (528)
+..+ + .+.+.||++|| |++--+...+.- . . ....+|+..||- |||-...+.--
T Consensus 82 ~~~~--------~-~~~D~IiaiGG-GS~iD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~p~iaIPTTagTGSE~t~~av 151 (383)
T PRK09860 82 KLLK--------E-NNCDSVISLGG-GSPHDCAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCI 151 (383)
T ss_pred HHHH--------H-cCCCEEEEeCC-chHHHHHHHHHHHHHCCCCHHHHhCcCccCCCCCCEEEEeCCCcchhccCceEE
Confidence 2111 1 23467888888 565555544321 0 0 123578999996 89877776665
Q ss_pred CC
Q 009691 190 WG 191 (528)
Q Consensus 190 wg 191 (528)
+.
T Consensus 152 i~ 153 (383)
T PRK09860 152 IT 153 (383)
T ss_pred EE
Confidence 53
No 57
>cd08176 LPO Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. Lactadehyde:propanediol oxidoreductase (LPO) is a member of the group III iron-activated dehydrogenases which catalyze the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. L-Fucose and L-rhamnose is used by Escherichia coli through an inducible pathway mediated by the fucose regulon comprising four linked oeprons fucO, fucA, fucPIK, and fucR. The fucA-encoded aldolase catalyzes the formation of dihydroxyacetone phosphate and L-lactaldehyde. Under anaerobic conditions, with NADH as a cofactor, lactaldehyde is converted by a fucO-encoded Lactadehyde:propanediol oxidoreductase (LPO) to L-1,2-propanediol, which is excreted as a fermentation product. In mutant strains, E. coli adapted to grow on L-1,2-propanediol, FucO catalyzes the oxidation of the polyol to
Probab=64.61 E-value=27 Score=37.22 Aligned_cols=48 Identities=17% Similarity=0.252 Sum_probs=30.4
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC--------------C-CCCCCCEEEeeC--CCCcchhhccCCC
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDL--------------K-LPHSPPVATVPL--GTGNNIPFSFGWG 191 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~--------------~-~~~~~plgiIPl--GTGNDlAR~LGwg 191 (528)
.+.||++|| |++.-+...+.-+ . ....+|+..||- |||--..+.--+.
T Consensus 86 ~D~IIavGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTtagTgSe~t~~avi~ 150 (377)
T cd08176 86 CDFIISIGG-GSPHDCAKAIGIVATNGGDIRDYEGVAKSKKPAVPIVAINTTAGTASEVTINYVIT 150 (377)
T ss_pred CCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHHhCcCccCCCCCCEEEeCCCCcchhccCCcEEEE
Confidence 456888887 7777666554210 0 124578999996 8887766655543
No 58
>TIGR01357 aroB 3-dehydroquinate synthase. This model represents 3-dehydroquinate synthase, the enzyme catalyzing the second of seven steps in the shikimate pathway of chorismate biosynthesis. Chorismate is the last common intermediate in the biosynthesis of all three aromatic amino acids.
Probab=64.49 E-value=25 Score=36.91 Aligned_cols=91 Identities=16% Similarity=0.245 Sum_probs=46.7
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCc--E--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 151 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~q--V--~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GG 151 (528)
++++|+.++..- ..+.+.+.+.|.... + +.+....+...++.+.+.++.+++.+ ..+...||++||
T Consensus 21 ~~~livtd~~~~----~~~~~~v~~~L~~~g~~~~~~~~~~~e~~~~~~~v~~~~~~~~~~~------~~r~d~IIavGG 90 (344)
T TIGR01357 21 SKLVIITDETVA----DLYADKLLEALQALGYNVLKLTVPDGEESKSLETVQRLYDQLLEAG------LDRSSTIIALGG 90 (344)
T ss_pred CeEEEEECCchH----HHHHHHHHHHHHhcCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCCEEEEEcC
Confidence 678888765442 235666777665432 2 23332222222332333322222110 112246777776
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 152 DGTASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 152 DGTV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
|++.-+...+... ....+|+..||-
T Consensus 91 -Gsv~D~aK~iA~~-~~~~~p~i~VPT 115 (344)
T TIGR01357 91 -GVVGDLAGFVAAT-YMRGIRFIQVPT 115 (344)
T ss_pred -hHHHHHHHHHHHH-HccCCCEEEecC
Confidence 8888888776521 124678888896
No 59
>cd08187 BDH Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction was 50-fold lower than that in the forward direction. The NADH-BDH had higher activity with longer chained aldehydes and was inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases.
Probab=62.46 E-value=38 Score=36.17 Aligned_cols=125 Identities=22% Similarity=0.236 Sum_probs=61.7
Q ss_pred cccccCceeccCCcc----cccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccC--cEEEEeecCchhHHHHHHHHH
Q 009691 53 NYYIPNYILVSGSEV----QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTL 126 (528)
Q Consensus 53 ~~~ip~~~~~~~~~~----~~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~--qV~dL~~~~p~~~l~~~~~~l 126 (528)
+|..|..+..-+... ...... .++++|+.-+.+.... .+++.+.+.|... ++..++...++.-++.+...+
T Consensus 3 ~~~~p~~i~~G~g~~~~l~~~~~~~-~~r~livt~~~~~~~~--~~~~~v~~~L~~~g~~~~~~~~v~~~p~~~~v~~~~ 79 (382)
T cd08187 3 TFYNPTKIIFGKGTESELGKELKKY-GKKVLLVYGGGSIKKN--GLYDRVIASLKEAGIEVVELGGVEPNPRLETVREGI 79 (382)
T ss_pred eecCCCEEEECCCHHHHHHHHHHHh-CCEEEEEeCCcHHHhc--CcHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 345676666543220 011122 3677777655444222 3456666666542 332222222222222222322
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC--------------C-CCCCCCEEEeeC--CCCcchhhccC
Q 009691 127 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL--------------K-LPHSPPVATVPL--GTGNNIPFSFG 189 (528)
Q Consensus 127 ~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~--------------~-~~~~~plgiIPl--GTGNDlAR~LG 189 (528)
+.++ + .+.+.||++|| |++.-+...+.-+ + ....+|+-.||- |||--..+.--
T Consensus 80 ~~~~--------~-~~~D~IIaiGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTTagTGsE~t~~av 149 (382)
T cd08187 80 ELCK--------E-EKVDFILAVGG-GSVIDSAKAIAAGAPYDGDVWDFFTGKAKIEKALPVGTVLTLAATGSEMNGGAV 149 (382)
T ss_pred HHHH--------H-cCCCEEEEeCC-hHHHHHHHHHHhHhhCCCCHHHHhcccCCCCCCCCEEEEeCCCchhhccCCCEE
Confidence 2111 1 23467888888 7777776654321 0 023578899995 88876666554
Q ss_pred C
Q 009691 190 W 190 (528)
Q Consensus 190 w 190 (528)
+
T Consensus 150 i 150 (382)
T cd08187 150 I 150 (382)
T ss_pred E
Confidence 4
No 60
>cd08186 Fe-ADH8 Iron-containing alcohol dehydrogenase. Type III Iron-containing alcohol dehydrogenases (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. The ADH of hyperthermophilic archaeon Thermococcus hydrothermalis oxidizes a series of primary aliphatic and aromatic alcohols preferentially from C2 to C8 but is also active towards methanol and glycerol and stereospecific for monoterpenes. It was suggested that the type III ADHs in microorganisms are involved in acetaldehyde detoxication rather than in alcohol turnover.
Probab=61.55 E-value=32 Score=36.75 Aligned_cols=103 Identities=17% Similarity=0.148 Sum_probs=52.4
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccC--cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 153 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~--qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDG 153 (528)
++++|+..+.+-... .+++.+.+.|... ++..+....+...++.+.+..+.++ + .+.+.||++|| |
T Consensus 27 kr~livtd~~~~~~~--g~~~~v~~~L~~~gi~~~~f~~v~~~p~~~~v~~~~~~~~--------~-~~~D~IIaiGG-G 94 (383)
T cd08186 27 SKVLLVTGKSAYKKS--GAWDKVEPALDEHGIEYVLYNKVTPNPTVDQVDEAAKLGR--------E-FGAQAVIAIGG-G 94 (383)
T ss_pred CEEEEEcCccHHhhc--ChHHHHHHHHHHcCCeEEEeCCCCCCCCHHHHHHHHHHHH--------H-cCCCEEEEeCC-c
Confidence 578888766554322 2355555655433 2222222222222222222222111 1 23456888888 7
Q ss_pred HHHHHHHHHhcC--------------C--CCCCCCEEEeeC--CCCcchhhccCC
Q 009691 154 TASWLLGVVSDL--------------K--LPHSPPVATVPL--GTGNNIPFSFGW 190 (528)
Q Consensus 154 TV~~Vl~~l~~~--------------~--~~~~~plgiIPl--GTGNDlAR~LGw 190 (528)
++.-+...+.-+ + ....+|+..||- |||...++.--+
T Consensus 95 S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTTagTGSE~t~~avi 149 (383)
T cd08186 95 SPIDSAKSAAILLEHPGKTARDLYEFKFTPEKALPLIAINLTHGTGTEVDRFAVA 149 (383)
T ss_pred cHHHHHHHHHHHHhCCCCcHHHHhCCCcccCCCCCEEEEeCCChhhhhhCCeEEE
Confidence 777666554321 0 013468888997 898776665544
No 61
>PRK00002 aroB 3-dehydroquinate synthase; Reviewed
Probab=60.63 E-value=32 Score=36.39 Aligned_cols=98 Identities=20% Similarity=0.211 Sum_probs=50.5
Q ss_pred CCeEEEEEcCcCCCCChhhHHHHHHHHhccCc----EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 009691 75 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 150 (528)
Q Consensus 75 ~~pllVivNPkSGg~~g~~ll~~~~~~L~~~q----V~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~G 150 (528)
.++++|+..+... ..+.+.+.+.|.... ++.+....+...++.+.+.++.+.+.+ ..+...||++|
T Consensus 31 ~~~~livtd~~~~----~~~~~~v~~~L~~~gi~~~~~~~~~~e~~~~~~~v~~~~~~~~~~~------~~r~d~IIavG 100 (358)
T PRK00002 31 GKKVAIVTDETVA----PLYLEKLRASLEAAGFEVDVVVLPDGEQYKSLETLEKIYDALLEAG------LDRSDTLIALG 100 (358)
T ss_pred CCeEEEEECCchH----HHHHHHHHHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCCEEEEEc
Confidence 3678888765542 236667777775432 222332222222332333322222110 11235577777
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcch
Q 009691 151 GDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNI 184 (528)
Q Consensus 151 GDGTV~~Vl~~l~~~~~~~~~plgiIPl--GTGNDl 184 (528)
| |++.-+...+... ....+|+..||- ++.+|-
T Consensus 101 G-Gsv~D~aK~iA~~-~~~gip~i~IPTT~~s~~ds 134 (358)
T PRK00002 101 G-GVIGDLAGFAAAT-YMRGIRFIQVPTTLLAQVDS 134 (358)
T ss_pred C-cHHHHHHHHHHHH-hcCCCCEEEcCchhhhcccc
Confidence 6 8888888876521 124678888896 444443
No 62
>KOG4180 consensus Predicted kinase [General function prediction only]
Probab=59.62 E-value=4.8 Score=42.08 Aligned_cols=71 Identities=20% Similarity=0.208 Sum_probs=41.5
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEe--eCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeE--e
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATV--PLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQI--D 218 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiI--PlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~i--D 218 (528)
.+.||-+|||||+-....-+.+ ...|.||+= |.|+---+. ++..|+. ++..+|..+..|.-.-+ +
T Consensus 106 aD~VisvGGDGTfL~Aasrv~~---~~~PViGvNtDP~~Seg~lc----L~~~~~~----n~~~al~k~~sgnF~wv~r~ 174 (395)
T KOG4180|consen 106 ADMVISVGGDGTFLLAASRVID---DSKPVIGVNTDPTGSEGHLC----LPDKYPS----NPAGALCKLTSGNFEWVLRQ 174 (395)
T ss_pred hhEEEEecCccceeehhhhhhc---cCCceeeecCCCCcCcceEe----ccccCCC----CcHHHHHHHHhccHHHhhhh
Confidence 4579999999998777663333 256777763 555543332 3444442 45567777776655333 3
Q ss_pred EEEEee
Q 009691 219 SWHILM 224 (528)
Q Consensus 219 ~w~V~~ 224 (528)
+..+++
T Consensus 175 rir~tv 180 (395)
T KOG4180|consen 175 RIRGTV 180 (395)
T ss_pred eeEEEE
Confidence 444444
No 63
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=59.32 E-value=28 Score=36.64 Aligned_cols=37 Identities=35% Similarity=0.495 Sum_probs=28.6
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchh
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 185 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlA 185 (528)
..+|++|||||+.-+ +.|.+ ..+++--||.==-||++
T Consensus 96 d~LivIGGdgS~~~a-~~L~~----~gi~vigiPkTIDNDl~ 132 (324)
T TIGR02483 96 DALIAIGGDGTLGIA-RRLAD----KGLPVVGVPKTIDNDLE 132 (324)
T ss_pred CEEEEECCchHHHHH-HHHHh----cCCCEEeeccccCCCCc
Confidence 369999999999654 34554 24777789988899997
No 64
>cd08172 GlyDH-like1 Glycerol dehydrogenases-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=59.16 E-value=61 Score=34.06 Aligned_cols=92 Identities=18% Similarity=0.109 Sum_probs=52.0
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EE-EeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-ID-LGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 153 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~d-L~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDG 153 (528)
++++|+..+.+ ...+.+.+++.|....+ +. .......+.++ +.++.++ + .+.+.||++|| |
T Consensus 24 ~~~liv~d~~~----~~~~~~~l~~~L~~~~~~~~~~~~~p~~~~v~---~~~~~~~--------~-~~~D~iIavGG-G 86 (347)
T cd08172 24 KRPLIVTGPRS----WAAAKPYLPESLAAGEAFVLRYDGECSEENIE---RLAAQAK--------E-NGADVIIGIGG-G 86 (347)
T ss_pred CeEEEEECHHH----HHHHHHHHHHHHhcCeEEEEEeCCCCCHHHHH---HHHHHHH--------h-cCCCEEEEeCC-c
Confidence 67888877665 23567777777744333 11 12122222222 2222111 1 13456888887 8
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeC--CCCcchhhc
Q 009691 154 TASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFS 187 (528)
Q Consensus 154 TV~~Vl~~l~~~~~~~~~plgiIPl--GTGNDlAR~ 187 (528)
++.-+...+... ..+|+..||- |||-..++.
T Consensus 87 s~~D~aK~ia~~---~~~p~i~VPTT~gtgse~t~~ 119 (347)
T cd08172 87 KVLDTAKAVADR---LGVPVITVPTLAATCAAWTPL 119 (347)
T ss_pred HHHHHHHHHHHH---hCCCEEEecCccccCccccee
Confidence 998888877643 2578888885 677666643
No 65
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 1,3-propanediol dehydrogenase-like (PPD). This family is a member of the iron-containing alcohol dehydrogenase superfamily, and exhibits a dehydroquinate synthase-like fold. Protein sequence similarity search and other biochemical evidences suggest that they are close to the iron-containing 1,3-propanediol dehydrogenase (EC 1.1.1.202). 1,3-propanediol dehydrogenase catalyzes the oxidation of propane-1,3-diol to 3-hydroxypropanal with the simultaneous reduction of NADP+ to NADPH. The protein structure of Thermotoga maritima TM0920 gene contains one NADP+ and one iron ion.
Probab=58.70 E-value=53 Score=34.71 Aligned_cols=47 Identities=23% Similarity=0.270 Sum_probs=30.5
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC-------------C-CCCCCCEEEeeC--CCCcchhhccCC
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDL-------------K-LPHSPPVATVPL--GTGNNIPFSFGW 190 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~-------------~-~~~~~plgiIPl--GTGNDlAR~LGw 190 (528)
.+.||++|| |++.-+...+.-+ . ....+|+..||- |||...++.--+
T Consensus 84 ~D~IIavGG-GSviD~aK~ia~~~~~~~~~~~~~~~~~~~~~~P~i~VPTtagTGsE~t~~avi 146 (357)
T cd08181 84 ADFVIGIGG-GSPLDAAKAIAVLIKNPDLKVELYFRSKYLKALPVVAIPTTAGTGSEVTQYSVL 146 (357)
T ss_pred CCEEEEeCC-chHHHHHHHHHHHHhCCCcHHHHhcccccCCCCCEEEEeCCCcchhhhCCeEEE
Confidence 456888887 7877777654310 0 123578999996 888777765443
No 66
>PRK15138 aldehyde reductase; Provisional
Probab=58.33 E-value=46 Score=35.73 Aligned_cols=124 Identities=19% Similarity=0.206 Sum_probs=59.2
Q ss_pred cccccCceeccCCc----ccccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHH
Q 009691 53 NYYIPNYILVSGSE----VQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEK 128 (528)
Q Consensus 53 ~~~ip~~~~~~~~~----~~~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~~l~~ 128 (528)
.|..|..++.-... ...... .++++|+.-+.|= +...++..+.+.|....+.......|...++.+.+..+.
T Consensus 5 ~~~~P~~i~~G~g~~~~l~~~l~~--~~~~livt~~~~~--~~~g~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~~~~ 80 (387)
T PRK15138 5 NLHTPTRILFGKGAIAGLREQIPA--DARVLITYGGGSV--KKTGVLDQVLDALKGMDVLEFGGIEPNPTYETLMKAVKL 80 (387)
T ss_pred EEeCCceEEECcCHHHHHHHHHhc--CCeEEEECCCchH--HhcCcHHHHHHHhcCCeEEEECCccCCCCHHHHHHHHHH
Confidence 45567776655422 111112 2567776443321 223456677777764444322222222222223232221
Q ss_pred hhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC----------------C--CCCCCCEEEeeC--CCCcchhhcc
Q 009691 129 FKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL----------------K--LPHSPPVATVPL--GTGNNIPFSF 188 (528)
Q Consensus 129 l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~----------------~--~~~~~plgiIPl--GTGNDlAR~L 188 (528)
.+ + .+.+.||++|| |++--+...+.-+ + ....+|+..||- |||-.....-
T Consensus 81 ~~--------~-~~~D~IIaiGG-GS~iD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~P~iaVPTTaGTGSE~t~~a 150 (387)
T PRK15138 81 VR--------E-EKITFLLAVGG-GSVLDGTKFIAAAANYPENIDPWHILETGGKEIKSAIPMGSVLTLPATGSESNAGA 150 (387)
T ss_pred HH--------H-cCCCEEEEeCC-hHHHHHHHHHHHHHhCCCCCCHHHHHhccCCCcCCCCCEEEEecCCccccccCCCE
Confidence 11 1 23467888888 5555544443210 0 113468888896 8887666554
Q ss_pred CC
Q 009691 189 GW 190 (528)
Q Consensus 189 Gw 190 (528)
-+
T Consensus 151 vi 152 (387)
T PRK15138 151 VI 152 (387)
T ss_pred EE
Confidence 44
No 67
>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway . In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=57.45 E-value=56 Score=34.33 Aligned_cols=96 Identities=15% Similarity=0.032 Sum_probs=51.9
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcE---EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV---IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 152 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV---~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGD 152 (528)
++++|+.-+.+ ...+++.+.+.|....+ |+.....|. .+.+.+..+.. ++ .+.+.||++||
T Consensus 23 ~r~livt~~~~----~~~~~~~v~~~L~~~~i~~~~~~~~~~p~--~~~v~~~~~~~--------~~-~~~D~IIavGG- 86 (351)
T cd08170 23 KRALIIADEFV----LDLVGAKIEESLAAAGIDARFEVFGGECT--RAEIERLAEIA--------RD-NGADVVIGIGG- 86 (351)
T ss_pred CeEEEEECHHH----HHHHHHHHHHHHHhCCCeEEEEEeCCcCC--HHHHHHHHHHH--------hh-cCCCEEEEecC-
Confidence 56666653222 22567777777765432 332222222 22222222211 11 23457888888
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcchhhccCC
Q 009691 153 GTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFSFGW 190 (528)
Q Consensus 153 GTV~~Vl~~l~~~~~~~~~plgiIPl--GTGNDlAR~LGw 190 (528)
|++.-+...+.-+ ..+|+..||- |||--.+..-.+
T Consensus 87 GS~iD~aK~ia~~---~~~P~iaIPTTagTgse~t~~avi 123 (351)
T cd08170 87 GKTLDTAKAVADY---LGAPVVIVPTIASTDAPTSALSVI 123 (351)
T ss_pred chhhHHHHHHHHH---cCCCEEEeCCccccCcccccceEE
Confidence 8888887776542 3578888896 777655554433
No 68
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=54.74 E-value=47 Score=34.60 Aligned_cols=39 Identities=31% Similarity=0.381 Sum_probs=29.2
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhh
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPF 186 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR 186 (528)
..+|++|||||+.-+.. |.+. ..+++--||-=--||+.-
T Consensus 93 d~Li~IGGdgs~~~a~~-L~e~---~~i~vigiPkTIDNDl~~ 131 (301)
T TIGR02482 93 EGLVVIGGDGSYTGAQK-LYEE---GGIPVIGLPGTIDNDIPG 131 (301)
T ss_pred CEEEEeCCchHHHHHHH-HHHh---hCCCEEeecccccCCCcC
Confidence 36999999999876543 3331 357788899999999983
No 69
>TIGR02638 lactal_redase lactaldehyde reductase. This clade of genes encoding iron-containing alcohol dehydrogenase (pfam00465) proteins is generally found in apparent operons for the catabolism of rhamnose or fucose. Catabolism of both of these monosaccharides results in lactaldehyde which is reduced by this enzyme to 1,2 propanediol. This protein is alternatively known by the name 1,2 propanediol oxidoreductase. This enzyme is active under anaerobic conditions in E. coli while being inactivated by reactive oxygen species under aerobic conditions. Under aerobic conditions the lactaldehyde product of rhamnose and fucose catabolism is believed to be oxidized to lactate by a separate enzyme, lactaldehyde dehydrogenase.
Probab=54.63 E-value=50 Score=35.22 Aligned_cols=125 Identities=14% Similarity=0.135 Sum_probs=59.9
Q ss_pred cccccCceeccCCc-cc---ccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCc--EEEEeecCchhHHHHHHHHH
Q 009691 53 NYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTL 126 (528)
Q Consensus 53 ~~~ip~~~~~~~~~-~~---~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~q--V~dL~~~~p~~~l~~~~~~l 126 (528)
+|.+|+.++.-... .. .......++++|+..+..- ...+++.+++.|.... +..+....+..-++.+.+..
T Consensus 3 ~~~~p~~i~fG~g~l~~l~~~l~~~g~~r~lvvt~~~~~---~~g~~~~v~~~L~~~~i~~~~~~~v~~~p~~~~v~~~~ 79 (379)
T TIGR02638 3 RLILNETSYFGAGAIEDIVDEVKRRGFKKALVVTDKDLI---KFGVADKVTDLLDEAGIAYELFDEVKPNPTITVVKAGV 79 (379)
T ss_pred cccCCCeEEECcCHHHHHHHHHHhcCCCEEEEEcCcchh---hccchHHHHHHHHHCCCeEEEECCCCCCcCHHHHHHHH
Confidence 46677777665422 10 1112233677777654321 1125566666665432 22222222222223232322
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC---------------C--CCCCCCEEEeeC--CCCcchhhc
Q 009691 127 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL---------------K--LPHSPPVATVPL--GTGNNIPFS 187 (528)
Q Consensus 127 ~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~---------------~--~~~~~plgiIPl--GTGNDlAR~ 187 (528)
+.++ + .+.+.||++|| |++.-+..++.-+ . ....+|+..||- |||-...+.
T Consensus 80 ~~~~--------~-~~~D~IiaiGG-GSviD~aKaia~~~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTTagTGse~t~~ 149 (379)
T TIGR02638 80 AAFK--------A-SGADYLIAIGG-GSPIDTAKAIGIISNNPEFADVRSLEGVAPTKKPGVPIIAIPTTAGTAAEVTIN 149 (379)
T ss_pred HHHH--------h-cCCCEEEEeCC-hHHHHHHHHHHHHHhCCCCCCHHHhhCCCccCCCCCCEEEECCCCchhhhhCCE
Confidence 2111 1 23456888888 7777666543210 0 013478888886 777665555
Q ss_pred cCC
Q 009691 188 FGW 190 (528)
Q Consensus 188 LGw 190 (528)
.-+
T Consensus 150 avi 152 (379)
T TIGR02638 150 YVI 152 (379)
T ss_pred EEE
Confidence 443
No 70
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.
Probab=54.00 E-value=78 Score=33.70 Aligned_cols=99 Identities=15% Similarity=0.113 Sum_probs=48.8
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCc--EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 153 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~q--V~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDG 153 (528)
++++||..+.+- . ..+++.+.+.|.... +..+....++.-++.+.+.++.++ + .+.+.||++|| |
T Consensus 24 ~r~livt~~~~~-~--~g~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~~~~~--------~-~~~D~IIaiGG-G 90 (375)
T cd08194 24 KRPLIVTDKVMV-K--LGLVDKLTDSLKKEGIESAIFDDVVSEPTDESVEEGVKLAK--------E-GGCDVIIALGG-G 90 (375)
T ss_pred CeEEEEcCcchh-h--cchHHHHHHHHHHCCCeEEEECCCCCCcCHHHHHHHHHHHH--------h-cCCCEEEEeCC-c
Confidence 567777765443 1 124556666665432 222222122222222333322111 1 23456888887 7
Q ss_pred HHHHHHHHHhcC--------------C-CCCCCCEEEeeC--CCCcchhhc
Q 009691 154 TASWLLGVVSDL--------------K-LPHSPPVATVPL--GTGNNIPFS 187 (528)
Q Consensus 154 TV~~Vl~~l~~~--------------~-~~~~~plgiIPl--GTGNDlAR~ 187 (528)
++.-+...+.-+ . ....+|+..||- |||--..+.
T Consensus 91 S~~D~AKaia~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTtagtGsE~t~~ 141 (375)
T cd08194 91 SPIDTAKAIAVLATNGGSIRDYKGPRIVDKPGLPLIAIPTTAGTGSEVTRF 141 (375)
T ss_pred hHHHHHHHHHHHHhCCCCHHHHhCcccccCCCCCEEEECCCCccccccCCe
Confidence 777766654310 0 123568888885 666554433
No 71
>PTZ00286 6-phospho-1-fructokinase; Provisional
Probab=53.89 E-value=14 Score=40.65 Aligned_cols=45 Identities=33% Similarity=0.457 Sum_probs=32.5
Q ss_pred EEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCCcchh---hccCCC
Q 009691 145 RLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIP---FSFGWG 191 (528)
Q Consensus 145 ~IIV~GGDGTV~~Vl~---~l~~~~~~~~~plgiIPlGTGNDlA---R~LGwg 191 (528)
.++++|||||+.-+.. .+.+. ..++++.-||-==-||+. +++|..
T Consensus 179 ~L~vIGGdgT~~~A~~L~ee~~~~--g~~I~VIGIPKTIDNDI~~td~S~GFd 229 (459)
T PTZ00286 179 ILFTLGGDGTHRGALAIYKELRRR--KLNISVVGIPKTIDNDIPIIDESFGFQ 229 (459)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHh--CCCceEEEeccccCCCCCCcccCcCch
Confidence 6999999999875543 33222 235788889999999997 555554
No 72
>cd08550 GlyDH-like Glycerol_dehydrogenase-like. Families of proteins related to glycerol dehydrogenases. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site. Some subfamilies have not been characterized till now.
Probab=53.81 E-value=43 Score=35.20 Aligned_cols=41 Identities=24% Similarity=0.208 Sum_probs=28.7
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcchhhc
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFS 187 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPl--GTGNDlAR~ 187 (528)
.+.||++|| |++..+...+... ..+|+..||- |||-..++.
T Consensus 78 ~d~IIavGG-Gs~~D~aK~ia~~---~~~p~i~VPTtagtgse~t~~ 120 (349)
T cd08550 78 ADVIIGVGG-GKTLDTAKAVADR---LDKPIVIVPTIASTCAASSNL 120 (349)
T ss_pred CCEEEEecC-cHHHHHHHHHHHH---cCCCEEEeCCccccCccccce
Confidence 456777877 8988888877542 3578899996 676555443
No 73
>cd08173 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme. Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH, EC 1.1.1.261) plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids. It catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme. The activity is zinc-dependent. One characteristic feature of archaea is that their cellular membrane has an ether linkage between the glycerol backbone and the hydrocarbon residues. The polar lipids of the members of Archaea consist of di- and tetraethers of glycerol with isoprenoid alcohols bound at the sn-2 and sn-3 positions of the glycerol moiety. The archaeal polar lipids have the enantiomeric configuration of a glycerophosph
Probab=53.32 E-value=59 Score=34.05 Aligned_cols=88 Identities=16% Similarity=0.105 Sum_probs=47.2
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccC-cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN-QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 154 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~-qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGT 154 (528)
++++|+..+.... .+.+.++..|... .+..+....| -++.+.+.++.++ + .+...||++|| |+
T Consensus 26 ~~~liv~d~~~~~----~~~~~v~~~l~~~~~~~~~~~~~~--~~~~v~~~~~~~~--------~-~~~d~iIaiGG-Gs 89 (339)
T cd08173 26 GRVLVVTGPTTKS----IAGKKVEALLEDEGEVDVVIVEDA--TYEEVEKVESSAR--------D-IGADFVIGVGG-GR 89 (339)
T ss_pred CeEEEEECCchHH----HHHHHHHHHHHhcCCeEEEEeCCC--CHHHHHHHHHHhh--------h-cCCCEEEEeCC-ch
Confidence 5677877655432 3566667666533 2222222222 1222222222111 1 13456777777 89
Q ss_pred HHHHHHHHhcCCCCCCCCEEEeeCCCCc
Q 009691 155 ASWLLGVVSDLKLPHSPPVATVPLGTGN 182 (528)
Q Consensus 155 V~~Vl~~l~~~~~~~~~plgiIPlGTGN 182 (528)
+.-+...+.-. ..+|+..||-=.|+
T Consensus 90 ~~D~aK~~a~~---~~~p~i~iPTT~~t 114 (339)
T cd08173 90 VIDVAKVAAYK---LGIPFISVPTAASH 114 (339)
T ss_pred HHHHHHHHHHh---cCCCEEEecCcccC
Confidence 99888877632 46789999964443
No 74
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=52.94 E-value=91 Score=33.19 Aligned_cols=104 Identities=15% Similarity=0.107 Sum_probs=53.5
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCc--EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 153 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~q--V~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDG 153 (528)
++++||.-+.+- ....++..+.+.|.... +..+....|..-.+.+.+..+.+ ++ .+.+.||++|| |
T Consensus 26 ~r~livt~~~~~--~~~g~~~~v~~~L~~~~~~~~~~~~v~~~p~~~~v~~~~~~~--------~~-~~~D~IiavGG-G 93 (380)
T cd08185 26 KKALIVTGNGSS--KKTGYLDRVIELLKQAGVEVVVFDKVEPNPTTTTVMEGAALA--------RE-EGCDFVVGLGG-G 93 (380)
T ss_pred CeEEEEeCCCch--hhccHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHH--------HH-cCCCEEEEeCC-c
Confidence 678888765552 12345666666665432 22122112222222222222211 11 23456888887 6
Q ss_pred HHHHHHHHHhcC-------------------C-CCCCCCEEEee--CCCCcchhhccCCC
Q 009691 154 TASWLLGVVSDL-------------------K-LPHSPPVATVP--LGTGNNIPFSFGWG 191 (528)
Q Consensus 154 TV~~Vl~~l~~~-------------------~-~~~~~plgiIP--lGTGNDlAR~LGwg 191 (528)
++.-+...+.-+ . ....+|+..|| .|||.-..+.--+.
T Consensus 94 S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTtagTGSE~t~~avi~ 153 (380)
T cd08185 94 SSMDTAKAIAFMAANEGDYWDYIFGGTGKGKPPPEKALPIIAITTTAGTGSEADPWAVIT 153 (380)
T ss_pred cHHHHHHHHHHHhhCCCCHHHHhcccccccccCCCCCCCEEEEcCCChhhhccCCeEEEE
Confidence 776666554221 0 11357899999 48887777665543
No 75
>cd08177 MAR Maleylacetate reductase is involved in many aromatic compounds degradation pathways of aerobic microbes. Maleylacetate reductases (MAR) play an important role in the degradation of aromatic compounds in aerobic microbes. In fungi and yeasts, the enzymes are involved in the catabolism of compounds such as phenol, tyrosine, benzoate, 4-hydroxybenzoate and resorcinol. In bacteria, the enzymes contribute to the degradation of resorcinol, 2,4-dihydroxybenzoate ([beta]-resorcylate) and 2,6-dihydroxybenzoate ([gamma]-resorcylate) via hydroxyquinol and maleylacetate. Maleylacetate reductases catalyze NADH- or NADPH-dependent reduction, at the carbon-carbon double bond, of maleylacetate or 2-chloromaleylacetate to 3-oxoadipate. In the case of 2-chloromaleylacetate, Maleylacetate reductases initially catalyses the NAD(P)H-dependent dechlorination to maleylacetate, which is then reduced to 3-oxoadipate. This enzyme is a homodimer. It is inhibited by thiol-blocking reagents such as p-
Probab=52.83 E-value=66 Score=33.70 Aligned_cols=90 Identities=18% Similarity=0.222 Sum_probs=47.3
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCc--EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 153 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~q--V~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDG 153 (528)
++++|+..+. ....+++.+.+.|.... +|+-....|. .+.+.+..+.++ + .+...||++|| |
T Consensus 24 ~~~livt~~~----~~~~~~~~v~~~l~~~~~~~~~~~~~~p~--~~~v~~~~~~~~--------~-~~~d~IIaiGG-G 87 (337)
T cd08177 24 SRALVLTTPS----LATKLAERVASALGDRVAGTFDGAVMHTP--VEVTEAAVAAAR--------E-AGADGIVAIGG-G 87 (337)
T ss_pred CeEEEEcChH----HHHHHHHHHHHHhccCCcEEeCCCCCCCC--HHHHHHHHHHHH--------h-cCCCEEEEeCC-c
Confidence 5677765432 22236777788876543 3432212222 221222222111 1 23456777877 8
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeC-CCCcch
Q 009691 154 TASWLLGVVSDLKLPHSPPVATVPL-GTGNNI 184 (528)
Q Consensus 154 TV~~Vl~~l~~~~~~~~~plgiIPl-GTGNDl 184 (528)
++..+...+.-. ..+|+..||- -||--.
T Consensus 88 s~iD~aK~ia~~---~~~p~i~IPTtatgse~ 116 (337)
T cd08177 88 STIDLAKAIALR---TGLPIIAIPTTLSGSEM 116 (337)
T ss_pred HHHHHHHHHHHH---hcCCEEEEcCCchhhhh
Confidence 999888877542 2578888883 255433
No 76
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like. Large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases; insect-type, or short-chain alcohol dehydrogenases; iron-containing alcohol dehydrogenases, and others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.
Probab=52.54 E-value=58 Score=34.47 Aligned_cols=47 Identities=21% Similarity=0.274 Sum_probs=29.0
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEeeC--CCCcchhhccCC
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNIPFSFGW 190 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~---------------~~~~~plgiIPl--GTGNDlAR~LGw 190 (528)
...||++|| |++.-+...+.-+- ....+|+..||- |||--..+...+
T Consensus 81 ~d~IiaiGG-Gs~~D~AK~va~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTt~gtgse~t~~avi 144 (370)
T cd08551 81 CDGVIAVGG-GSVLDTAKAIALLATNPGDIWDYEGGKPVIKPALPLIAIPTTAGTGSEVTPFAVI 144 (370)
T ss_pred CCEEEEeCC-chHHHHHHHHHHHHhCCCcHHHHhCcccccCCCCCEEEecCCCcchhhcCCeEEE
Confidence 456888887 77777666553210 013578999997 777655555544
No 77
>PLN00180 NDF6 (NDH-dependent flow 6); Provisional
Probab=51.64 E-value=3.1 Score=38.76 Aligned_cols=14 Identities=43% Similarity=0.878 Sum_probs=11.5
Q ss_pred EEcCchHHHHHHHH
Q 009691 148 VAGGDGTASWLLGV 161 (528)
Q Consensus 148 V~GGDGTV~~Vl~~ 161 (528)
-.|||||++|+-+.
T Consensus 130 gdGGDGT~hW~Yd~ 143 (180)
T PLN00180 130 GDGGDGTGHWVYER 143 (180)
T ss_pred ccCCCCceeeEeeh
Confidence 45999999998754
No 78
>COG1454 EutG Alcohol dehydrogenase, class IV [Energy production and conversion]
Probab=51.56 E-value=60 Score=35.00 Aligned_cols=124 Identities=18% Similarity=0.184 Sum_probs=66.1
Q ss_pred cccccCceeccCCc-cc---ccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCc----EEEEeecCchhHHHHHHH
Q 009691 53 NYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VIDLGEKAPDKVLHQLYV 124 (528)
Q Consensus 53 ~~~ip~~~~~~~~~-~~---~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~q----V~dL~~~~p~~~l~~~~~ 124 (528)
.|++|+.++.-... .. .....-.++++|+.-|. -....+++.+.+.|+... ||+-....|. .+.+..
T Consensus 3 ~~~~p~~i~fG~g~l~~l~~~~~~~g~~r~liVTd~~---~~~~g~~~~v~~~L~~~~i~~~if~~v~p~P~--~~~v~~ 77 (377)
T COG1454 3 WFYLPTEILFGRGSLKELGEEVKRLGAKRALIVTDRG---LAKLGLLDKVLDSLDAAGIEYEVFDEVEPEPT--IETVEA 77 (377)
T ss_pred ccccCceEEecCChHHHHHHHHHhcCCCceEEEECCc---cccchhHHHHHHHHHhcCCeEEEecCCCCCCC--HHHHHH
Confidence 46677777765432 11 11122236777776654 233346778888887655 4443322332 332333
Q ss_pred HHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHh---cCC------------CCCCCCEEEee--CCCCcchhhc
Q 009691 125 TLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVS---DLK------------LPHSPPVATVP--LGTGNNIPFS 187 (528)
Q Consensus 125 ~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~---~~~------------~~~~~plgiIP--lGTGNDlAR~ 187 (528)
.++..+ ..+.+.||+.|| |++.-+..++. ... -..++|+-.|| .|||..-.+.
T Consensus 78 ~~~~~~---------~~~~D~iIalGG-GS~~D~AK~i~~~~~~~~~~~~~~~i~~~~~~~~plIaIPTTaGTGSEvT~~ 147 (377)
T COG1454 78 GAEVAR---------EFGPDTIIALGG-GSVIDAAKAIALLAENPGSVLDYEGIGKVKKPKAPLIAIPTTAGTGSEVTPF 147 (377)
T ss_pred HHHHHH---------hcCCCEEEEeCC-ccHHHHHHHHHHHhhCCchhhhhcccccccCCCCCEEEecCCCcchhhhcCe
Confidence 333211 124567888888 66665555432 110 01226777888 5888777777
Q ss_pred cCCC
Q 009691 188 FGWG 191 (528)
Q Consensus 188 LGwg 191 (528)
--+.
T Consensus 148 aVit 151 (377)
T COG1454 148 AVIT 151 (377)
T ss_pred EEEE
Confidence 6554
No 79
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=51.40 E-value=35 Score=31.80 Aligned_cols=60 Identities=17% Similarity=0.247 Sum_probs=40.2
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHc
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 211 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~ 211 (528)
..-+.++|+- ...++..+..+ ...++-+-+|=+|| ||+.+.... ..-.+++.++++.+..
T Consensus 43 ~~n~g~~G~t-~~~~~~~l~~~-~~~~pd~Vii~~G~-ND~~~~~~~-----~~~~~~l~~li~~i~~ 102 (191)
T cd01836 43 WRLFAKTGAT-SADLLRQLAPL-PETRFDVAVISIGV-NDVTHLTSI-----ARWRKQLAELVDALRA 102 (191)
T ss_pred EEEEecCCcC-HHHHHHHHHhc-ccCCCCEEEEEecc-cCcCCCCCH-----HHHHHHHHHHHHHHHh
Confidence 3567888984 45666666542 23577899999998 998764321 1123567788888876
No 80
>PRK10624 L-1,2-propanediol oxidoreductase; Provisional
Probab=51.16 E-value=65 Score=34.40 Aligned_cols=125 Identities=14% Similarity=0.169 Sum_probs=60.7
Q ss_pred ccccccCceeccCCc-cc---ccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccC----cEEEEeecCchhHHHHHH
Q 009691 52 NNYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLGEKAPDKVLHQLY 123 (528)
Q Consensus 52 ~~~~ip~~~~~~~~~-~~---~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~----qV~dL~~~~p~~~l~~~~ 123 (528)
.+|+.|+.++.-... .. .......++++|+.-+..-. ..+++++...|... .+|+-.+..|. ++.+.
T Consensus 3 ~~~~~~~~i~~G~g~l~~l~~~~~~~g~~~~lvvtd~~~~~---~g~~~~v~~~L~~~g~~~~~~~~v~~~p~--~~~v~ 77 (382)
T PRK10624 3 NRMILNETAYFGRGAIGALTDEVKRRGFKKALIVTDKTLVK---CGVVAKVTDVLDAAGLAYEIYDGVKPNPT--IEVVK 77 (382)
T ss_pred ccccCCCeEEECcCHHHHHHHHHHhcCCCEEEEEeCcchhh---CcchHHHHHHHHHCCCeEEEeCCCCCCcC--HHHHH
Confidence 456777777664322 10 11122336788876643221 12455666666432 23431222222 22222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHh---cCC--------------CCCCCCEEEeeC--CCCcch
Q 009691 124 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVS---DLK--------------LPHSPPVATVPL--GTGNNI 184 (528)
Q Consensus 124 ~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~---~~~--------------~~~~~plgiIPl--GTGNDl 184 (528)
+.++.++ + .+.+.||++|| |++.-+...+. ... ....+|+..||- |||--.
T Consensus 78 ~~~~~~~--------~-~~~D~IIaiGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTTagTGse~ 147 (382)
T PRK10624 78 EGVEVFK--------A-SGADYLIAIGG-GSPQDTCKAIGIISNNPEFADVRSLEGVAPTKKPSVPIIAIPTTAGTAAEV 147 (382)
T ss_pred HHHHHHH--------h-cCCCEEEEeCC-hHHHHHHHHHHHHHHCCCCCCHHHHhCcCcccCCCCCEEEECCCCchhhhh
Confidence 2222111 1 13456888887 77777665432 100 113478899995 888766
Q ss_pred hhccCCC
Q 009691 185 PFSFGWG 191 (528)
Q Consensus 185 AR~LGwg 191 (528)
.+..-+.
T Consensus 148 t~~avi~ 154 (382)
T PRK10624 148 TINYVIT 154 (382)
T ss_pred cceeeee
Confidence 6655443
No 81
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=50.11 E-value=60 Score=34.10 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=26.3
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcc
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNN 183 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPl--GTGND 183 (528)
.+.||++|| |++..+...+.-. ..+|+..||- |||--
T Consensus 79 ~d~iiavGG-Gs~~D~aK~ia~~---~~~p~i~VPTt~gtgse 117 (345)
T cd08171 79 ADMIFAVGG-GKAIDTVKVLADK---LGKPVFTFPTIASNCAA 117 (345)
T ss_pred CCEEEEeCC-cHHHHHHHHHHHH---cCCCEEEecCccccCcc
Confidence 457888888 8888888776542 2578888886 55543
No 82
>COG1691 NCAIR mutase (PurE)-related proteins [General function prediction only]
Probab=48.13 E-value=27 Score=34.97 Aligned_cols=57 Identities=30% Similarity=0.531 Sum_probs=37.8
Q ss_pred EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCC
Q 009691 107 VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 181 (528)
Q Consensus 107 V~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTG 181 (528)
+||.... ++++++..+.+++.. .....|+|+|=||++-.|+.+|.+ +|+--+|--+|
T Consensus 150 ~~DvGVA----GiHRLl~~l~r~~~~--------~~~~lIVvAGMEGaLPsvvagLvD------~PVIavPTsVG 206 (254)
T COG1691 150 VYDVGVA----GIHRLLSALKRLKIE--------DADVLIVVAGMEGALPSVVAGLVD------VPVIAVPTSVG 206 (254)
T ss_pred EEeeccc----hHHhhhhHHHHHHhh--------CCCeEEEEcccccchHHHHHhccC------CCeEecccccc
Confidence 4666443 345566655443321 124579999999999999999975 56655687666
No 83
>PRK09423 gldA glycerol dehydrogenase; Provisional
Probab=47.77 E-value=63 Score=34.25 Aligned_cols=118 Identities=16% Similarity=0.078 Sum_probs=61.1
Q ss_pred ccccccCceeccCCc-c---cccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCc--E-EEEeecCchhHHHHHHH
Q 009691 52 NNYYIPNYILVSGSE-V---QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V-IDLGEKAPDKVLHQLYV 124 (528)
Q Consensus 52 ~~~~ip~~~~~~~~~-~---~~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~q--V-~dL~~~~p~~~l~~~~~ 124 (528)
+.|.+|..++.-... . ....... ++++||.-+.+- ..+.+.+.+.|.... + |+.....|.. +.+.+
T Consensus 3 ~~f~~p~~i~~G~g~~~~l~~~l~~~g-~~~livtd~~~~----~~~~~~v~~~l~~~~~~~~~~~~~~ep~~--~~v~~ 75 (366)
T PRK09423 3 RIFISPSKYVQGKGALARLGEYLKPLG-KRALVIADEFVL----GIVGDRVEASLKEAGLTVVFEVFNGECSD--NEIDR 75 (366)
T ss_pred ccccCCceEEECCCHHHHHHHHHHHcC-CEEEEEEChhHH----HHHHHHHHHHHHhCCCeEEEEEeCCCCCH--HHHHH
Confidence 456777776654322 1 0111122 677777654432 236677777775432 2 4322222221 11222
Q ss_pred HHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcchhhccC
Q 009691 125 TLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFSFG 189 (528)
Q Consensus 125 ~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPl--GTGNDlAR~LG 189 (528)
.++.++ + .+.+.||++|| |++.-+...+.-+ ..+|+..||- |||--....-.
T Consensus 76 ~~~~~~--------~-~~~d~IIavGG-Gsv~D~aK~iA~~---~~~p~i~IPTtagtgSe~t~~av 129 (366)
T PRK09423 76 LVAIAE--------E-NGCDVVIGIGG-GKTLDTAKAVADY---LGVPVVIVPTIASTDAPTSALSV 129 (366)
T ss_pred HHHHHH--------h-cCCCEEEEecC-hHHHHHHHHHHHH---cCCCEEEeCCccccCccccCceE
Confidence 221111 1 13457888888 8888888777542 3578888896 55554444433
No 84
>cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=47.71 E-value=81 Score=33.52 Aligned_cols=102 Identities=18% Similarity=0.209 Sum_probs=49.4
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCc--EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 153 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~q--V~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDG 153 (528)
++++|+..+..-. ..+++.+.+.|.... +..+....+..-++.+.+.++.++ + .+.+.||++|| |
T Consensus 27 ~~~lvvt~~~~~~---~g~~~~v~~~L~~~g~~~~~~~~v~~~p~~~~v~~~~~~~~--------~-~~~d~IIaiGG-G 93 (374)
T cd08189 27 KKVLIVTDKGLVK---LGLLDKVLEALEGAGIEYAVYDGVPPDPTIENVEAGLALYR--------E-NGCDAILAVGG-G 93 (374)
T ss_pred CeEEEEeCcchhh---cccHHHHHHHHHhcCCeEEEeCCCCCCcCHHHHHHHHHHHH--------h-cCCCEEEEeCC-c
Confidence 6778876644321 224556666665432 222222122222222333322111 1 23456888887 6
Q ss_pred HHHHHHHHHhcCC----------------CCCCCCEEEeeC--CCCcchhhccCC
Q 009691 154 TASWLLGVVSDLK----------------LPHSPPVATVPL--GTGNNIPFSFGW 190 (528)
Q Consensus 154 TV~~Vl~~l~~~~----------------~~~~~plgiIPl--GTGNDlAR~LGw 190 (528)
++.-+...+.-+- ....+|+..||- |||-...+.--+
T Consensus 94 S~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagTGsE~t~~avi 148 (374)
T cd08189 94 SVIDCAKAIAARAANPKKSLRKLTGLLKVKKPLPPLFAIPTTAGTGSEVTIAAVI 148 (374)
T ss_pred cHHHHHHHHHHHHhCCCCCHHHHhCccccCCCCCCEEEEECCCccccccCCeEEE
Confidence 7766665442210 012368888885 777665555433
No 85
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=47.59 E-value=21 Score=32.85 Aligned_cols=61 Identities=15% Similarity=0.133 Sum_probs=36.1
Q ss_pred EEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcC
Q 009691 145 RLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNA 212 (528)
Q Consensus 145 ~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a 212 (528)
.-...+|+.| .+++..+...-...+|.+.+|=+|| ||+.+.. +. ..-.+++.++++.+...
T Consensus 26 ~N~Gi~G~~~-~~~~~~~~~~~~~~~p~~vvi~~G~-ND~~~~~--~~---~~~~~~~~~lv~~i~~~ 86 (171)
T cd04502 26 VNRGFGGSTL-ADCLHYFDRLVLPYQPRRVVLYAGD-NDLASGR--TP---EEVLRDFRELVNRIRAK 86 (171)
T ss_pred eecCcccchH-HHHHHHHHhhhccCCCCEEEEEEec-CcccCCC--CH---HHHHHHHHHHHHHHHHH
Confidence 3456678854 4455444332223467899999999 9986532 21 11234567777777653
No 86
>PRK15454 ethanol dehydrogenase EutG; Provisional
Probab=46.65 E-value=94 Score=33.50 Aligned_cols=124 Identities=16% Similarity=0.155 Sum_probs=60.0
Q ss_pred ccccccCceeccCCc----ccccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE----EEEeecCchhHHHHHH
Q 009691 52 NNYYIPNYILVSGSE----VQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV----IDLGEKAPDKVLHQLY 123 (528)
Q Consensus 52 ~~~~ip~~~~~~~~~----~~~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV----~dL~~~~p~~~l~~~~ 123 (528)
..|..|+.++.-... .........+.++|+.-+ + -....++..+++.|....+ |+-....|. .+.+.
T Consensus 22 ~~f~~P~~i~fG~g~~~~l~~~~~~~g~~~~lvv~~~-~--~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~P~--~~~v~ 96 (395)
T PRK15454 22 KTFSVPPVTLCGPGAVSSCGQQAQTRGLKHLFVMADS-F--LHQAGMTAGLTRSLAVKGIAMTLWPCPVGEPC--ITDVC 96 (395)
T ss_pred ceeecCCeEEECcCHHHHHHHHHHhcCCCEEEEEcCc-c--hhhCccHHHHHHHHHHcCCeEEEECCCCCCcC--HHHHH
Confidence 467788887765432 111112223555555321 1 1223356667777764432 321122232 22233
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC---C------------CCCCCCEEEeeC--CCCcchhh
Q 009691 124 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL---K------------LPHSPPVATVPL--GTGNNIPF 186 (528)
Q Consensus 124 ~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~---~------------~~~~~plgiIPl--GTGNDlAR 186 (528)
+.++.. ++ .+.+.||++|| |++-.+..++.-+ . ....+|+..||- |||-...+
T Consensus 97 ~~~~~~--------r~-~~~D~IiavGG-GS~iD~AKaia~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTtaGTGSE~t~ 166 (395)
T PRK15454 97 AAVAQL--------RE-SGCDGVIAFGG-GSVLDAAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAIPTTAGTGSETTN 166 (395)
T ss_pred HHHHHH--------Hh-cCcCEEEEeCC-hHHHHHHHHHHHHHhCCCccHHHHhcccccCCCCCEEEECCCCcchhhhCC
Confidence 332211 11 23567888888 5655555433111 0 113468888895 88877666
Q ss_pred ccCC
Q 009691 187 SFGW 190 (528)
Q Consensus 187 ~LGw 190 (528)
.--+
T Consensus 167 ~avi 170 (395)
T PRK15454 167 VTVI 170 (395)
T ss_pred eEEE
Confidence 6544
No 87
>PLN02834 3-dehydroquinate synthase
Probab=46.51 E-value=68 Score=35.14 Aligned_cols=92 Identities=17% Similarity=0.211 Sum_probs=47.5
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccC----cEEEEe--ecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEE
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLG--EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVA 149 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~----qV~dL~--~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~ 149 (528)
++++||.++... ..+.+.+.+.|... .+++.. ...+...++.+.+.++.+.+.+ ..+...||++
T Consensus 101 ~rvlIVtD~~v~----~~~~~~v~~~L~~~g~~~~v~~~v~~~gE~~ksl~~v~~~~~~l~~~~------~dr~~~VIAi 170 (433)
T PLN02834 101 KRVLVVTNETVA----PLYLEKVVEALTAKGPELTVESVILPDGEKYKDMETLMKVFDKALESR------LDRRCTFVAL 170 (433)
T ss_pred CEEEEEECccHH----HHHHHHHHHHHHhcCCceEEEEEEecCCcCCCCHHHHHHHHHHHHhcC------CCcCcEEEEE
Confidence 678888765543 23666677777542 334322 2112222332333322222111 1123356767
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEeeCC
Q 009691 150 GGDGTASWLLGVVSDLKLPHSPPVATVPLG 179 (528)
Q Consensus 150 GGDGTV~~Vl~~l~~~~~~~~~plgiIPlG 179 (528)
|| |++.-+...+... ....+|+..||--
T Consensus 171 GG-Gsv~D~ak~~A~~-y~rgiplI~VPTT 198 (433)
T PLN02834 171 GG-GVIGDMCGFAAAS-YQRGVNFVQIPTT 198 (433)
T ss_pred CC-hHHHHHHHHHHHH-hcCCCCEEEECCc
Confidence 66 8888888765421 1246899999983
No 88
>cd08192 Fe-ADH7 Iron-containing alcohol dehydrogenases-like, involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. NAD-dependent iron-containing alcohol dehydrogenase-like. Proteins in this family are NAD-dependent alcohol dehydrogenases which are involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. They catalyze the oxidation of beta-hydroxy CoA ester to beta-oxo CoA ester, which then be subject to CoA-dependent thiolysis to yield acetyl-CoA and 6-C8-SPC-CoA. The major laundry surfactant in worldwide use is commercial linear alkylbenzenesulfonate (LAS) which contains 20 congeners of linear alkanes (C10 to C13). LAS is fully biodegradable in oxic environments. Degradation involves microbial communities. Parvibaculum lavamentivorans DS-1T is a representative member of many heterotrophic, LAS-degrading communities, in which it catalyzes the first steps of LAS degradation. Strain DS-1T is a small heterotrophic bacterium able to omega-oxygenate the comm
Probab=46.38 E-value=87 Score=33.19 Aligned_cols=44 Identities=30% Similarity=0.425 Sum_probs=26.1
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCC-------------------CCCCCCEEEeeC--CCCcchhhc
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLK-------------------LPHSPPVATVPL--GTGNNIPFS 187 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~-------------------~~~~~plgiIPl--GTGNDlAR~ 187 (528)
...||++|| |++.-+...+.-+. ....+|+..||- |||--..+.
T Consensus 82 ~d~IIaiGG-GSviD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagtgse~t~~ 146 (370)
T cd08192 82 CDGVIAFGG-GSALDLAKAVALMAGHPGPLWDYEDIEGGWPRITDAIPPLIAIPTTAGTGSEVGRA 146 (370)
T ss_pred CCEEEEeCC-chHHHHHHHHHHHHhCCCCHHHHhcccccccccCCCCCCEEEecCCCchhhhhCCc
Confidence 456888888 77777766543210 012368888885 666544433
No 89
>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=45.19 E-value=22 Score=39.03 Aligned_cols=45 Identities=31% Similarity=0.410 Sum_probs=31.1
Q ss_pred EEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEeeCCCCcchh---hccCCC
Q 009691 145 RLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP---FSFGWG 191 (528)
Q Consensus 145 ~IIV~GGDGTV~~Vl~~---l~~~~~~~~~plgiIPlGTGNDlA---R~LGwg 191 (528)
.++++|||||+.-+... +.+. ...+++--||-==-||+. +++|..
T Consensus 175 ~L~vIGGdgT~~gA~~l~ee~~~~--g~~I~VIGIPKTIDNDi~~td~S~GFd 225 (443)
T PRK06830 175 ILFVIGGDGTLRGASAIAEEIERR--GLKISVIGIPKTIDNDINFIQKSFGFE 225 (443)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHh--CCCceEEEeccccCCCCcCcccCCCHH
Confidence 69999999998755432 2222 235788888998899997 444443
No 90
>PF12219 End_tail_spike: Catalytic domain of bacteriophage endosialidase; InterPro: IPR024430 This entry represents the C-terminal domain of endosialidases which is approximately 160 amino acids in length. There are two conserved sequence motifs: VSR and YGA. The endosialidase protein forms homotrimeric molecules and this domain complexes into a tail-spike stalk. The stalk region folds in a triple beta-helix that is interrupted by a small triple beta-prism domain. The tail-spike is a multifunctional protein device used by the phage to fulfil the following functions: (i) to adsorb to the bacterial polySia capsule (ii) to de-polymerise the capsule to gain access to the outer bacterial membrane, and finally (iii) to mediate tight adhesion to the membrane, a prerequisite for the initiation of the infection cycle [].; PDB: 3JU4_A 3GW6_A 3GVL_A 3GVK_B 3GVJ_A 1V0E_B 1V0F_E.
Probab=44.03 E-value=11 Score=34.52 Aligned_cols=15 Identities=60% Similarity=0.880 Sum_probs=11.7
Q ss_pred CcEEEEEcCchHHHH
Q 009691 143 RLRLIVAGGDGTASW 157 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~ 157 (528)
..|+||||||||-+.
T Consensus 85 gQRlIvsGGegtss~ 99 (160)
T PF12219_consen 85 GQRLIVSGGEGTSSS 99 (160)
T ss_dssp G-EEEEESSSSSSGG
T ss_pred ccEEEEeCCCCcccC
Confidence 458999999999653
No 91
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=43.89 E-value=77 Score=33.26 Aligned_cols=37 Identities=32% Similarity=0.535 Sum_probs=29.5
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchh
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 185 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlA 185 (528)
..++++|||||+.-+. .|.+ ..+++--||-==-||+.
T Consensus 94 d~Li~IGGdgs~~~a~-~L~e----~~i~vigiPkTIDNDi~ 130 (317)
T cd00763 94 DALVVIGGDGSYMGAM-RLTE----HGFPCVGLPGTIDNDIP 130 (317)
T ss_pred CEEEEECCchHHHHHH-HHHH----cCCCEEEecccccCCCC
Confidence 3699999999987664 4444 25788888999999998
No 92
>cd08175 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner. Glycerol-1-phosphate dehydrogenase (G1PDH) plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires a Ni++ ion. In Bacillus subtilis, it has been described as AraM gene in L-arabinose (ara) operon. AraM protein forms homodimer. This family is bacteria specific.
Probab=43.73 E-value=68 Score=33.68 Aligned_cols=34 Identities=26% Similarity=0.266 Sum_probs=25.1
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCC
Q 009691 142 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLG 179 (528)
Q Consensus 142 ~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlG 179 (528)
+.+.||++|| |++.-+...+.-+ ..+|+-.||-=
T Consensus 80 ~~d~IIaIGG-Gs~~D~aK~vA~~---~~~p~i~IPTT 113 (348)
T cd08175 80 DTDLIIAVGS-GTINDITKYVSYK---TGIPYISVPTA 113 (348)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHh---cCCCEEEecCc
Confidence 3466888888 8888888877643 46788888953
No 93
>PLN02564 6-phosphofructokinase
Probab=43.50 E-value=30 Score=38.40 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=27.8
Q ss_pred EEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCCcchh
Q 009691 145 RLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIP 185 (528)
Q Consensus 145 ~IIV~GGDGTV~~Vl~---~l~~~~~~~~~plgiIPlGTGNDlA 185 (528)
.++++|||||+.-+.. .+.+. ..++++.-||-==-||+.
T Consensus 179 ~LivIGGDGS~~gA~~L~e~~~~~--g~~i~VIGIPKTIDNDI~ 220 (484)
T PLN02564 179 QVYIIGGDGTQKGASVIYEEIRRR--GLKVAVAGIPKTIDNDIP 220 (484)
T ss_pred EEEEECCchHHHHHHHHHHHHHHc--CCCceEEEecccccCCCc
Confidence 6999999999875443 23222 234567888988899997
No 94
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=42.64 E-value=70 Score=33.85 Aligned_cols=42 Identities=24% Similarity=0.215 Sum_probs=28.7
Q ss_pred cEEEEEcCchHHHHHHHHHhcC-CCCCCCCEEEeeCCCCcchh
Q 009691 144 LRLIVAGGDGTASWLLGVVSDL-KLPHSPPVATVPLGTGNNIP 185 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~-~~~~~~plgiIPlGTGNDlA 185 (528)
..++++|||||+.-+...-... +....+++--||-=--||+.
T Consensus 94 ~~Lv~IGGd~s~~~a~~L~e~~~~~~~~i~vigiPkTIDNDl~ 136 (338)
T cd00363 94 DALVVIGGDGSYTGADLLTEEWPSKYQGFNVIGLPGTIDNDIK 136 (338)
T ss_pred CEEEEeCCHHHHHHHHHHHHHHHhcCCCccEEEeeecccCCCc
Confidence 3699999999987554322111 01246888888977799987
No 95
>cd08182 HEPD Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP). Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP) with either NADH or NADPH as a cofactor. NADH is the preferred cofactor. PnAA is a biosynthetic intermediate for several phosphonates such as the antibiotic fosfomycin, phosphinothricin tripeptide (PTT), and 2-aminoethylphosphonate (AEP). This enzyme is named PhpC in PTT biosynthesis pathway in Streptomyces hygroscopicus and S. viridochromogenes. Members of this family are only found in bacteria.
Probab=41.53 E-value=1.4e+02 Score=31.51 Aligned_cols=44 Identities=20% Similarity=0.370 Sum_probs=26.4
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC-----------------C--CCCCCCEEEeeC--CCCcchhhc
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDL-----------------K--LPHSPPVATVPL--GTGNNIPFS 187 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~-----------------~--~~~~~plgiIPl--GTGNDlAR~ 187 (528)
.+.||++|| |++.-+...+.-+ . ....+|+..||- |||--.+..
T Consensus 78 ~D~IIavGG-Gs~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagtgse~t~~ 142 (367)
T cd08182 78 PDAVLAVGG-GSVLDTAKALAALLGAPREALEDLRIRNKERENRERALPLIAIPTTAGTGSEVTPF 142 (367)
T ss_pred cCEEEEeCC-cHHHHHHHHHHHHHhCCCcHHHHHHHhccCCCCCCCCCCEEEeCCCCCchhhhCCE
Confidence 456777777 7777776655321 0 113578888886 666544444
No 96
>PRK14072 6-phosphofructokinase; Provisional
Probab=40.19 E-value=78 Score=34.53 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=28.4
Q ss_pred cEEEEEcCchHHHHHHHHHhcCC--CCCCCCEEEeeCCCCcchh
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLK--LPHSPPVATVPLGTGNNIP 185 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~--~~~~~plgiIPlGTGNDlA 185 (528)
..+|++|||||+.-+.. |.+.. ...++++--||-==-||+.
T Consensus 105 d~LivIGGdgS~~~a~~-L~e~~~~~g~~i~vIgIPkTIDNDl~ 147 (416)
T PRK14072 105 GYFFYNGGNDSMDTALK-VSQLAKKMGYPIRCIGIPKTIDNDLP 147 (416)
T ss_pred CEEEEECChHHHHHHHH-HHHHHHHhCCCceEEEeeecccCCCC
Confidence 36999999999875543 22210 1234788888977799998
No 97
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD. Currently three, structurally and catalytically, different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Iron-containing ADH's have been found in yeast (gene ADH4) [], as well as in Zymomonas mobilis (gene adhB) []. These two iron-containing ADH's are closely related to the following enzymes: Escherichia coli propanediol oxidoreductase (1.1.1.77 from EC) (gene fucO) [], an enzyme involved in the metabolism of fucose and which also seems to contain ferrous ion(s). Clostridium acetobutylicum NADPH- and NADH-dependent butanol dehydrogenases (1.1.1 from EC) (genes adh1, bdhA and bdhB) [], an enzyme which has activity using butanol and ethanol as substrates. E. coli adhE [], an iron-dependent enzyme which harbor three different activities: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating) (1.2.1.10 from EC) and pyruvate-formate-lyase deactivase. Bacterial glycerol dehydrogenase (1.1.1.6 from EC) (gene gldA or dhaD) []. Clostridium kluyveri NAD-dependent 4-hydroxybutyrate dehydrogenase (4hbd) (1.1.1.61 from EC). Citrobacter freundii and Klebsiella pneumoniae 1,3-propanediol dehydrogenase (1.1.1.202 from EC) (gene dhaT). Bacillus methanolicus NAD-dependent methanol dehydrogenase (1.1.1.244 from EC) []. E. coli and Salmonella typhimurium ethanolamine utilization protein eutG. E. coli hypothetical protein yiaY. ; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1RRM_A 2BL4_A 2BI4_A 3BFJ_R 1KQ3_A 1JQ5_A 1JPU_A 1JQA_A 3JZD_A 3UHJ_A ....
Probab=39.37 E-value=77 Score=33.47 Aligned_cols=100 Identities=22% Similarity=0.167 Sum_probs=51.8
Q ss_pred eEEEEEcCcCCCCChhhHHHHHHHHhcc--Cc--EEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009691 77 PVLVFINSKSGGQLGGKLLLTYRSLLNE--NQ--VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 152 (528)
Q Consensus 77 pllVivNPkSGg~~g~~ll~~~~~~L~~--~q--V~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGD 152 (528)
+++||..+ +- ....+++.+...|.. .+ +|+-....|. .+.+.+.++.+++ .+.+.||++||
T Consensus 23 r~lvVt~~-~~--~~~~~~~~v~~~L~~~~i~~~~~~~~~~~p~--~~~v~~~~~~~~~---------~~~D~IIaiGG- 87 (366)
T PF00465_consen 23 RVLVVTDP-SL--SKSGLVDRVLDALEEAGIEVQVFDGVGPNPT--LEDVDEAAEQARK---------FGADCIIAIGG- 87 (366)
T ss_dssp EEEEEEEH-HH--HHHTHHHHHHHHHHHTTCEEEEEEEESSS-B--HHHHHHHHHHHHH---------TTSSEEEEEES-
T ss_pred CEEEEECc-hH--HhCccHHHHHHHHhhCceEEEEEecCCCCCc--HHHHHHHHHHHHh---------cCCCEEEEcCC-
Confidence 78888876 43 223367788887743 23 3442222222 2223333322211 23467888888
Q ss_pred hHHHHHHHHHh---cCC-------------CCCCCCEEEeeC--CCCcchhhccCCC
Q 009691 153 GTASWLLGVVS---DLK-------------LPHSPPVATVPL--GTGNNIPFSFGWG 191 (528)
Q Consensus 153 GTV~~Vl~~l~---~~~-------------~~~~~plgiIPl--GTGNDlAR~LGwg 191 (528)
|++..+...+. ... ....+|+..||- |||-.+.+...+.
T Consensus 88 GS~~D~aK~va~~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtGsE~t~~avi~ 144 (366)
T PF00465_consen 88 GSVMDAAKAVALLLANPGDLRDLLGKGPPPTKPALPLIAIPTTAGTGSEVTPYAVIY 144 (366)
T ss_dssp HHHHHHHHHHHHHHTSSSCGGGGGCECSCCSS--SEEEEEESSSSSSGCCSSEEEEE
T ss_pred CCcCcHHHHHHhhccCCCcHHHHHhhccccccCCCcEEEeeCCcccccccccccccc
Confidence 56555554432 211 012378999996 7776776665543
No 98
>cd08188 Fe-ADH4 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is belonged to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=39.33 E-value=1.3e+02 Score=32.10 Aligned_cols=47 Identities=21% Similarity=0.293 Sum_probs=28.2
Q ss_pred cCcEEEEEcCchHHHHHHHHHh---cC-----------CC-CCCCCEEEeeC--CCCcchhhccC
Q 009691 142 KRLRLIVAGGDGTASWLLGVVS---DL-----------KL-PHSPPVATVPL--GTGNNIPFSFG 189 (528)
Q Consensus 142 ~~~~IIV~GGDGTV~~Vl~~l~---~~-----------~~-~~~~plgiIPl--GTGNDlAR~LG 189 (528)
+.+.||++|| |++.-+...+. .. +. ...+|+..||- |||--.++.--
T Consensus 85 ~~d~IIaiGG-GsviD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTT~gTgSE~t~~av 148 (377)
T cd08188 85 GCDVIIAVGG-GSPIDCAKGIGIVASNGGHILDFEGVDKITRPLPPLICIPTTAGSGADVSQFAI 148 (377)
T ss_pred CCCEEEEeCC-chHHHHHHHHHHHHHCCCCHHHHhCcccccCCCCCEEEECCCCccccccCCeEE
Confidence 3456888887 67766664331 10 00 12468899996 88876666443
No 99
>KOG2178 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=39.00 E-value=70 Score=34.55 Aligned_cols=58 Identities=28% Similarity=0.440 Sum_probs=37.3
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCee
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 215 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~ 215 (528)
+.||..||||||--......+ .-|||--.-+|| ||.=. + .+.++.++.+..|.+++..
T Consensus 170 D~iItLGGDGTvL~aS~LFq~----~VPPV~sFslGs-------lGFLt--p-f~f~~f~~~l~~v~~~~~~ 227 (409)
T KOG2178|consen 170 DLIITLGGDGTVLYASSLFQR----SVPPVLSFSLGS-------LGFLT--P-FPFANFQEQLARVLNGRAA 227 (409)
T ss_pred eEEEEecCCccEEEehhhhcC----CCCCeEEeecCC-------ccccc--c-ccHHHHHHHHHHHhcCcce
Confidence 369999999998665554433 346665556664 34321 1 2345788889999988853
No 100
>PRK00843 egsA NAD(P)-dependent glycerol-1-phosphate dehydrogenase; Reviewed
Probab=38.83 E-value=1.3e+02 Score=31.74 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=25.9
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcc
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNN 183 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGND 183 (528)
...||++|| |++.-+...+.- ...+|+-.||-=-++|
T Consensus 88 ~d~IIaiGG-Gsv~D~ak~vA~---~rgip~I~IPTT~~td 124 (350)
T PRK00843 88 AGFLIGVGG-GKVIDVAKLAAY---RLGIPFISVPTAASHD 124 (350)
T ss_pred CCEEEEeCC-chHHHHHHHHHH---hcCCCEEEeCCCccCC
Confidence 356777777 899998887753 2467899999544434
No 101
>cd08178 AAD_C C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD). Alcohol dehydrogenase domain located on the C-terminal of a bifunctional two-domain protein. The N-terminal of the protein contains an acetaldehyde-CoA dehydrogenase domain. This protein is involved in pyruvate metabolism. Pyruvate is converted to acetyl-CoA and formate by pyruvate formate-lysase (PFL). Under anaerobic condition, acetyl-CoA is reduced to acetaldehyde and ethanol by this two-domain protein. Acetyl-CoA is first converted into an enzyme-bound thiohemiacetal by the N-terminal acetaldehyde dehydrogenase domain. The enzyme-bound thiohemiacetal is subsequently reduced by the C-terminal NAD+-dependent alcohol dehydrogenase domain. In E. coli, this protein is called AdhE and was shown pyruvate formate-lysase (PFL) deactivase activity, which is involved in the inactivation of PFL, a key enzyme in anaerobic metabolism. In Escherichi
Probab=37.37 E-value=2e+02 Score=30.93 Aligned_cols=48 Identities=21% Similarity=0.256 Sum_probs=29.1
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcC----------------C----------CCCCCCEEEeeC--CCCcchhhccCC
Q 009691 142 KRLRLIVAGGDGTASWLLGVVSDL----------------K----------LPHSPPVATVPL--GTGNNIPFSFGW 190 (528)
Q Consensus 142 ~~~~IIV~GGDGTV~~Vl~~l~~~----------------~----------~~~~~plgiIPl--GTGNDlAR~LGw 190 (528)
+.+.||++|| |++.-+...+.-+ . ....+|+..||- |||-..++..-+
T Consensus 78 ~~D~IIaiGG-GS~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~I~VPTTagTGSE~t~~avi 153 (398)
T cd08178 78 KPDTIIALGG-GSPMDAAKIMWLFYEHPEVDFEDLAQKFMDIRKRIYKFPKLGKKAKLVAIPTTSGTGSEVTPFAVI 153 (398)
T ss_pred CCCEEEEeCC-ccHHHHHHHHHHHHhCCCcchhHhhhhhcccccccccccccCCCCCEEEeCCCCcccccccCeEEE
Confidence 3467888888 6666666544310 0 013468888995 788766555544
No 102
>cd08196 DHQS-like1 Dehydroquinate synthase (DHQS)-like. DHQS catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase-like proteins. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. The activity of DHQS requires NAD as cofactor. Proteins of this family share sequence similarity and functional motifs with that of dehydroquinate synthase, but the specific function has not been characterized.
Probab=37.34 E-value=1.9e+02 Score=30.67 Aligned_cols=91 Identities=15% Similarity=0.226 Sum_probs=46.1
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 155 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV 155 (528)
++++|+..+.-. ..+.+.+++.|....++.+....+...++.+.+.++.+.+.+ ..+...||++|| |++
T Consensus 20 ~r~lIVtD~~v~----~l~~~~l~~~L~~~~~~~~~~~e~~k~l~~v~~~~~~~~~~~------~~r~d~iIaiGG-Gsv 88 (346)
T cd08196 20 ENDVFIVDANVA----ELYRDRLDLPLDAAPVIAIDATEENKSLEAVSSVIESLRQNG------ARRNTHLVAIGG-GII 88 (346)
T ss_pred CeEEEEECccHH----HHHHHHHHHHhcCCeEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCcEEEEECC-hHH
Confidence 567787776442 236677777775444443333223333333333333222210 112245666666 888
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeC
Q 009691 156 SWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 156 ~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
.-+...+..+ ....+++-.||-
T Consensus 89 ~D~ak~vA~~-~~rgi~~i~iPT 110 (346)
T cd08196 89 QDVTTFVASI-YMRGVSWSFVPT 110 (346)
T ss_pred HHHHHHHHHH-HHcCCCeEEecc
Confidence 8888766431 113456666664
No 103
>PRK03202 6-phosphofructokinase; Provisional
Probab=36.95 E-value=1e+02 Score=32.36 Aligned_cols=38 Identities=32% Similarity=0.410 Sum_probs=29.6
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhh
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPF 186 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR 186 (528)
..+|++|||||+.-+.. |.+ ..+++--||-==-||+.-
T Consensus 95 d~Li~IGGd~s~~~a~~-L~e----~~i~vigiPkTIDNDl~g 132 (320)
T PRK03202 95 DALVVIGGDGSYMGAKR-LTE----HGIPVIGLPGTIDNDIAG 132 (320)
T ss_pred CEEEEeCChHHHHHHHH-HHh----cCCcEEEecccccCCCCC
Confidence 36999999999986543 444 367888899988999983
No 104
>cd08174 G1PDH-like Glycerol-1-phosphate dehydrogenase-like. Glycerol-1-phosphate dehydrogenase-like. The proteins of this family have not been characterized. The protein sequences have high similarity with that of glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. This family is bacteria specific.
Probab=36.38 E-value=2.2e+02 Score=29.63 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=26.2
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCc
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGN 182 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGN 182 (528)
...||++|| |++.-+...+... ..+|+..||-=.++
T Consensus 76 ~d~iIaiGG-Gsv~D~aK~vA~~---~~~p~i~vPTt~~t 111 (331)
T cd08174 76 VDAVVGIGG-GKVIDVAKYAAFL---RGIPLSVPTTNLND 111 (331)
T ss_pred CCEEEEeCC-cHHHHHHHHHHhh---cCCCEEEecCcccc
Confidence 456777877 8999998887652 56889999964333
No 105
>PRK06203 aroB 3-dehydroquinate synthase; Reviewed
Probab=35.79 E-value=1.9e+02 Score=31.26 Aligned_cols=92 Identities=16% Similarity=0.230 Sum_probs=48.1
Q ss_pred CCeEEEEEcCcCCCCChhhHHHHHHHHhccCc----EEEEe-------ecCch-hHHHHHHHHHHHhhhccchhhhhhcc
Q 009691 75 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VIDLG-------EKAPD-KVLHQLYVTLEKFKAAGDVFASEIEK 142 (528)
Q Consensus 75 ~~pllVivNPkSGg~~g~~ll~~~~~~L~~~q----V~dL~-------~~~p~-~~l~~~~~~l~~l~~~~~~~a~~~~~ 142 (528)
.++++||..+.--. ....++..+.+.|+... +|+.. ...|. +..+.+...+. +. ...+
T Consensus 42 ~~r~liVtD~~v~~-~~~~l~~~v~~~L~~~g~~~~~~~~~~~~~~ge~~k~~~~~v~~i~~~~~---~~------~~dr 111 (389)
T PRK06203 42 PKKVLVVIDSGVLR-AHPDLLEQITAYFAAHADVLELVAEPLVVPGGEAAKNDPALVEALHAAIN---RH------GIDR 111 (389)
T ss_pred CCeEEEEECchHHH-hhhhHHHHHHHHHHhcCCceeeeeeEEEccCCccCCCcHHHHHHHHHHHH---Hc------CCCC
Confidence 36788887755432 11235677777775322 23321 11232 22333333322 11 1122
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
...||++|| |++.-+...+..+ ....+|+-.||-
T Consensus 112 ~d~IIaiGG-Gsv~D~ak~iA~~-~~rgip~I~IPT 145 (389)
T PRK06203 112 HSYVLAIGG-GAVLDMVGYAAAT-AHRGVRLIRIPT 145 (389)
T ss_pred CceEEEeCC-cHHHHHHHHHHHH-hcCCCCEEEEcC
Confidence 346777776 8888888766532 124678888995
No 106
>cd08184 Fe-ADH3 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and is belonged to the iron-containing alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron or zinc ions. Members of this family are mainly found in bacteria.
Probab=35.63 E-value=1.9e+02 Score=30.67 Aligned_cols=47 Identities=19% Similarity=0.203 Sum_probs=28.0
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC-----------C----CCCCCCEEEeeC--CCCcchhhccCC
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDL-----------K----LPHSPPVATVPL--GTGNNIPFSFGW 190 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~-----------~----~~~~~plgiIPl--GTGNDlAR~LGw 190 (528)
.+.||++|| |++-.+...+.-+ . ....+|+..||- |||--..+.--+
T Consensus 82 ~D~IIaiGG-GS~iD~AKaia~~~~~~~~~~~~~~~~~~~~~~~PlIaVPTTaGTGSE~t~~aVi 145 (347)
T cd08184 82 PCAIVGIGG-GSTLDVAKAVSNMLTNPGSAEDYQGWDLVKNPAVYKIGIPTLSGTGAEASRTAVL 145 (347)
T ss_pred CCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHhcccccccCCCCcEEEEeCCCccccccCCcEEE
Confidence 467888887 6666665544211 0 012467888994 888766555443
No 107
>cd08183 Fe-ADH2 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases (Fe-ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is a member of the iron-activated alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown. They are mainly found in bacteria.
Probab=34.03 E-value=1.8e+02 Score=30.93 Aligned_cols=95 Identities=16% Similarity=0.146 Sum_probs=49.7
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccC----cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 151 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~----qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GG 151 (528)
++++|+..+.+. .++.+...|... .+|+.. ..|. .+.+.+.++..+ + .+.+.||++||
T Consensus 23 ~r~livtd~~~~------~~~~v~~~L~~~g~~~~~~~~~-~~p~--~~~v~~~~~~~~--------~-~~~D~IIaiGG 84 (374)
T cd08183 23 RRVLLVTGASSL------RAAWLIEALRAAGIEVTHVVVA-GEPS--VELVDAAVAEAR--------N-AGCDVVIAIGG 84 (374)
T ss_pred CcEEEEECCchH------HHHHHHHHHHHcCCeEEEecCC-CCcC--HHHHHHHHHHHH--------h-cCCCEEEEecC
Confidence 677887765553 556666666542 234432 2332 222333322111 1 23456888887
Q ss_pred chHHHHHHHHHhcC------------C-------CCCCCCEEEeeC--CCCcchhhccC
Q 009691 152 DGTASWLLGVVSDL------------K-------LPHSPPVATVPL--GTGNNIPFSFG 189 (528)
Q Consensus 152 DGTV~~Vl~~l~~~------------~-------~~~~~plgiIPl--GTGNDlAR~LG 189 (528)
|++.-+...+.-+ . ....+|+..||- |||.-..+.--
T Consensus 85 -GS~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagTGSE~t~~av 142 (374)
T cd08183 85 -GSVIDAGKAIAALLPNPGSVLDYLEGVGRGLPLDGPPLPFIAIPTTAGTGSEVTKNAV 142 (374)
T ss_pred -chHHHHHHHHHHHHcCCCCHHHHHhccCccccCCCCCCCEEEecCCCchhHHhCCeEE
Confidence 7777666554311 0 013568888884 67766655443
No 108
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=33.63 E-value=67 Score=29.54 Aligned_cols=49 Identities=22% Similarity=0.370 Sum_probs=32.0
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcC
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNA 212 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a 212 (528)
...++.++|.| |-+.+|=+|| ||+.+..+.+. ..-..++.++++.+.+.
T Consensus 45 ~~~~~~~~g~~-----------------pd~vii~~G~-ND~~~~~~~~~---~~~~~~~~~li~~i~~~ 93 (169)
T cd01831 45 EYSIIAYSGIG-----------------PDLVVINLGT-NDFSTGNNPPG---EDFTNAYVEFIEELRKR 93 (169)
T ss_pred cEEEEEecCCC-----------------CCEEEEECCc-CCCCCCCCCCH---HHHHHHHHHHHHHHHHH
Confidence 46788999998 5689999999 99865432111 11224566677777653
No 109
>PLN02884 6-phosphofructokinase
Probab=33.56 E-value=1e+02 Score=33.61 Aligned_cols=40 Identities=28% Similarity=0.293 Sum_probs=28.4
Q ss_pred cEEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEeeCCCCcchh
Q 009691 144 LRLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP 185 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~---l~~~~~~~~~plgiIPlGTGNDlA 185 (528)
..+|++|||||+.-+... +... ...+++--||-==-||+.
T Consensus 145 d~LivIGGdgS~~~a~~L~~~~~~~--g~~i~vIGIPkTIDNDi~ 187 (411)
T PLN02884 145 NMLFVLGGNGTHAGANAIHNECRKR--KMKVSVVGVPKTIDNDIL 187 (411)
T ss_pred CEEEEECCchHHHHHHHHHHHHHHc--CCCceEEeccccccCCCc
Confidence 369999999998755432 1111 134788888998899996
No 110
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated
Probab=33.17 E-value=97 Score=33.70 Aligned_cols=40 Identities=20% Similarity=0.209 Sum_probs=28.6
Q ss_pred cEEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEeeCCCCcchh
Q 009691 144 LRLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP 185 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~---l~~~~~~~~~plgiIPlGTGNDlA 185 (528)
..++++|||||..-+... +.+. ...+++--||-==-||+.
T Consensus 114 d~Li~IGGdgS~~~a~~L~~~~~~~--g~~i~vvgIPkTIDNDl~ 156 (403)
T PRK06555 114 DILHTIGGDDTNTTAADLAAYLAEN--GYDLTVVGLPKTIDNDVV 156 (403)
T ss_pred CEEEEECChhHHHHHHHHHHHHHHh--CCCceEEEeeeeeeCCCC
Confidence 369999999998755432 2221 125788888999999995
No 111
>cd08549 G1PDH_related Glycerol-1-phosphate_dehydrogenase and related proteins. Bacterial and archeal glycerol-1-phosphate dehydrogenase-like oxidoreductases. The proteins have similarity with glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. It also contains archaeal Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) that plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids.
Probab=32.94 E-value=1.3e+02 Score=31.40 Aligned_cols=32 Identities=31% Similarity=0.257 Sum_probs=24.2
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
...||++|| |++.-+...+.-. ..+|+..||-
T Consensus 81 ~d~IIaiGG-Gsv~D~aK~iA~~---~gip~I~VPT 112 (332)
T cd08549 81 TEFLLGIGS-GTIIDLVKFVSFK---VGKPFISVPT 112 (332)
T ss_pred CCEEEEECC-cHHHHHHHHHHHH---cCCCEEEeCC
Confidence 456888888 8999888877632 4678999995
No 112
>PRK14071 6-phosphofructokinase; Provisional
Probab=32.84 E-value=1.6e+02 Score=31.50 Aligned_cols=38 Identities=24% Similarity=0.330 Sum_probs=28.5
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchh
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 185 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlA 185 (528)
..+|++|||||+.- +..|.+. ..+++--||-==-||+.
T Consensus 109 d~Li~IGGdgS~~~-a~~L~~~---~~i~vIgiPkTIDNDl~ 146 (360)
T PRK14071 109 DALIGIGGDGSLAI-LRRLAQQ---GGINLVGIPKTIDNDVG 146 (360)
T ss_pred CEEEEECChhHHHH-HHHHHHh---cCCcEEEecccccCCCc
Confidence 36999999999864 4445441 26788888988899986
No 113
>cd08198 DHQS-like2 Dehydroquinate synthase (DHQS)-like. DHQS catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase-like proteins. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. The activity of DHQS requires NAD as cofactor. Proteins of this family share sequence similarity and functional motifs with that of dehydroquinate synthase, but the specific function has not been characterized.
Probab=29.55 E-value=2.9e+02 Score=29.68 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=24.9
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCC
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLG 179 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlG 179 (528)
..||+.|| |++.-+...+... ....+|+-.||-=
T Consensus 101 ~~IIalGG-G~v~D~ag~vA~~-~~rGip~I~IPTT 134 (369)
T cd08198 101 SYVIAIGG-GAVLDAVGYAAAT-AHRGVRLIRIPTT 134 (369)
T ss_pred cEEEEECC-hHHHHHHHHHHHH-hcCCCCEEEECCC
Confidence 46777777 9999998877643 2356888888854
No 114
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis. Terpeniods are plant natural products with important pharmaceutical activity. DXS catalyzes a transketolase-type condensation of pyruvate with D-glyceraldehyde-3-phosphate to form 1-deoxy-D-xylulose-5-phosphate (DXP) and carbon dioxide. The formation of DXP leads to the formation of the terpene precursor IPP (isopentyl diphosphate) and to the formation of thiamine (vitamin B1) and pyridoxal (vitamin B6).
Probab=28.62 E-value=92 Score=30.07 Aligned_cols=67 Identities=18% Similarity=0.305 Sum_probs=36.3
Q ss_pred CcEEEEEcCchHHH--HHHHHHhcCCCCCCCCEEEe---------eCCCCcchhhccCCCCCC--CCChhHHHHHHHHHH
Q 009691 143 RLRLIVAGGDGTAS--WLLGVVSDLKLPHSPPVATV---------PLGTGNNIPFSFGWGKKN--PNTDQQAVLSFLEQV 209 (528)
Q Consensus 143 ~~~IIV~GGDGTV~--~Vl~~l~~~~~~~~~plgiI---------PlGTGNDlAR~LGwg~~~--~~~~~~~~~~~l~~I 209 (528)
..+|++.=|||+++ .+.+++........+.+.|+ |.+...+.++++||.... .+.|.+++.++++..
T Consensus 97 ~~~vv~~~GDG~~~eG~~~Eal~~A~~~~~~li~vvdnN~~~~~~~~~~~~~~~~a~G~~~~~~vdG~d~~~l~~a~~~a 176 (195)
T cd02007 97 KRKVIAVIGDGALTGGMAFEALNNAGYLKSNMIVILNDNEMSISPNVGTPGNLFEELGFRYIGPVDGHNIEALIKVLKEV 176 (195)
T ss_pred CCeEEEEEcccccccChHHHHHHHHHHhCCCEEEEEECCCcccCCCCCCHHHHHHhcCCCccceECCCCHHHHHHHHHHH
Confidence 45799999999987 33333322111111112222 333456778889997643 444545555555543
No 115
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=27.53 E-value=56 Score=29.91 Aligned_cols=61 Identities=18% Similarity=0.190 Sum_probs=36.8
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHc
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 211 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~ 211 (528)
+.....+|+.|- +++..+...-...+|.+.+|=+|| ||+.+.. +. ....+++.++++.+.+
T Consensus 26 v~n~g~~G~t~~-~~~~~~~~~~~~~~pd~v~i~~G~-ND~~~~~--~~---~~~~~~~~~l~~~~~~ 86 (174)
T cd01841 26 VNNLGIAGISSR-QYLEHIEPQLIQKNPSKVFLFLGT-NDIGKEV--SS---NQFIKWYRDIIEQIRE 86 (174)
T ss_pred EEecccccccHH-HHHHHHHHHHHhcCCCEEEEEecc-ccCCCCC--CH---HHHHHHHHHHHHHHHH
Confidence 346778899664 445544211123567899999999 8986532 21 1223557777777765
No 116
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=27.45 E-value=1.4e+02 Score=34.37 Aligned_cols=74 Identities=14% Similarity=0.198 Sum_probs=42.6
Q ss_pred EEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCCcchh-----hccCCCCCCCCChhHHHHHHHHHHHc-CCee
Q 009691 145 RLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIP-----FSFGWGKKNPNTDQQAVLSFLEQVKN-AKEM 215 (528)
Q Consensus 145 ~IIV~GGDGTV~~Vl~---~l~~~~~~~~~plgiIPlGTGNDlA-----R~LGwg~~~~~~~~~~~~~~l~~I~~-a~~~ 215 (528)
.+|++|||||..-+.. .+.+. ...+++--||-==-||+. .++|.++ ..+-..+++..|.. +...
T Consensus 176 ~LvvIGGddS~~~A~~Lae~~~~~--~~~i~VIGIPKTIDNDL~~~~td~s~GFdT-----A~k~~ae~I~ni~~dA~S~ 248 (610)
T PLN03028 176 GLVIIGGVTSNTDAAQLAETFAEA--KCKTKVVGVPVTLNGDLKNQFVETNVGFDT-----ICKVNSQLISNVCTDALSA 248 (610)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHc--CCCceEEEeceeeeCCCCCCCCCCCcCHHH-----HHHHHHHHHHHHHHHHHhh
Confidence 5999999999765532 22221 236778888988899997 4555542 11223344444432 3332
Q ss_pred eEeEEEEeeee
Q 009691 216 QIDSWHILMRM 226 (528)
Q Consensus 216 ~iD~w~V~~~~ 226 (528)
. .+|.+.-.|
T Consensus 249 ~-~~~~~VevM 258 (610)
T PLN03028 249 E-KYYYFIRLM 258 (610)
T ss_pred C-CeEEEEEeC
Confidence 2 457765444
No 117
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase. Diphosphate--fructose-6-phosphate 1-phosphotransferase catalyzes the addition of phosphate from diphosphate (PPi) to fructose 6-phosphate to give fructose 1,6-bisphosphate (EC 2.7.1.90). The enzyme is also known as pyrophosphate-dependent phosphofructokinase. The usage of PPi-dependent enzymes in glycolysis presumably frees up ATP for other processes. TIGR02482 represents the ATP-dependent 6-phosphofructokinase enzyme contained within Pfam pfam00365: Phosphofructokinase. This model hits primarily bacterial, plant alpha, and plant beta sequences.
Probab=26.09 E-value=1.4e+02 Score=33.81 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=28.1
Q ss_pred EEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCCcchhh
Q 009691 145 RLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIPF 186 (528)
Q Consensus 145 ~IIV~GGDGTV~~Vl~---~l~~~~~~~~~plgiIPlGTGNDlAR 186 (528)
.+|++|||||..-+.. .+.+. ..++++--||-==-||+..
T Consensus 164 ~LviIGGdgS~~~A~~Lae~~~~~--g~~i~VIGIPkTIDNDl~~ 206 (539)
T TIGR02477 164 GLVIIGGDDSNTNAALLAEYFAKH--GLKTQVIGVPKTIDGDLKN 206 (539)
T ss_pred EEEEeCCchHHHHHHHHHHHHHhc--CCCceEEEEeeeecCCCCC
Confidence 5999999999865542 22221 2357777789888999975
No 118
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. 5-hydroxyvalerate dehydrogenase (HVD) is an iron-containing (type III) NAD-dependent alcohol dehydrogenase. It plays a role in the cyclopentanol metabolism biochemical pathway. It catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. This cyclopentanol (cpn) degradation pathway is present in some bacteria which can use cyclopentanol as sole carbon source. In Comamonas sp. strain NCIMB 9872, this enzyme is encoded by the CpnD gene.
Probab=25.68 E-value=3.1e+02 Score=29.09 Aligned_cols=45 Identities=27% Similarity=0.310 Sum_probs=27.3
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC--------------CC-CCCCCEEEeeC--CCCcchhhcc
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDL--------------KL-PHSPPVATVPL--GTGNNIPFSF 188 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~--------------~~-~~~~plgiIPl--GTGNDlAR~L 188 (528)
...||++|| |++.-+...+.-+ +. ...+|+..||- |||-...+.-
T Consensus 84 ~D~IIaiGG-Gs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgSe~t~~a 145 (376)
T cd08193 84 ADGVIGFGG-GSSMDVAKLVAVLAGSDQPLADMYGVDLVAGPRLPLILVPTTAGTGSEVTPIA 145 (376)
T ss_pred CCEEEEeCC-chHHHHHHHHHHHHHCCCCHHHHhCCCccCCCCCCEEEeCCCCcchHhhCCeE
Confidence 456888887 7777777654321 00 13568888885 6665554443
No 119
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).
Probab=25.61 E-value=1.8e+02 Score=34.36 Aligned_cols=41 Identities=27% Similarity=0.418 Sum_probs=28.9
Q ss_pred EEEEEcCchHHHHHHHHHhc-CCC-CCCCCEEEeeCCCCcchh
Q 009691 145 RLIVAGGDGTASWLLGVVSD-LKL-PHSPPVATVPLGTGNNIP 185 (528)
Q Consensus 145 ~IIV~GGDGTV~~Vl~~l~~-~~~-~~~~plgiIPlGTGNDlA 185 (528)
.+|++|||||..-+...... .+. ...+++-.||-==-||++
T Consensus 481 ~LivIGGdgs~~~a~~L~~~~~~~~~~~i~vvgIPkTIDNDi~ 523 (745)
T TIGR02478 481 GLLIIGGFEAFEALLQLEQAREKYPAFRIPMVVIPATISNNVP 523 (745)
T ss_pred EEEEeCChHHHHHHHHHHHHHhhCCCCCccEEEecccccCCCC
Confidence 59999999998755432211 011 135889999999999997
No 120
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=24.95 E-value=1.5e+02 Score=27.39 Aligned_cols=58 Identities=5% Similarity=0.023 Sum_probs=37.5
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCC
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAK 213 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~ 213 (528)
+.=..+|||+++...+..+.. ..+|-+-+|=+|| ||+.... ...+++..+++.+.+..
T Consensus 34 v~N~g~~G~~~~~~~~~~~~~---~~~pd~vii~~G~-ND~~~~~--------~~~~~~~~~i~~i~~~~ 91 (177)
T cd01844 34 VINLGFSGNARLEPEVAELLR---DVPADLYIIDCGP-NIVGAEA--------MVRERLGPLVKGLRETH 91 (177)
T ss_pred eEEeeecccccchHHHHHHHH---hcCCCEEEEEecc-CCCccHH--------HHHHHHHHHHHHHHHHC
Confidence 456788999886554433221 2467899999998 8864321 12357888888887643
No 121
>PRK10586 putative oxidoreductase; Provisional
Probab=24.88 E-value=3.3e+02 Score=29.02 Aligned_cols=39 Identities=21% Similarity=0.217 Sum_probs=26.4
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcchh
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIP 185 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPl--GTGNDlA 185 (528)
.+.||++|| |++.-+...+... ..+|+..||- |||.-.+
T Consensus 87 ~d~iiavGG-Gs~iD~aK~~a~~---~~~p~i~vPT~a~t~s~~s 127 (362)
T PRK10586 87 RQVVIGVGG-GALLDTAKALARR---LGLPFVAIPTIAATCAAWT 127 (362)
T ss_pred CCEEEEecC-cHHHHHHHHHHhh---cCCCEEEEeCCcccccccc
Confidence 355777776 7888888777642 4679999997 4554333
No 122
>COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion]
Probab=24.42 E-value=3.3e+02 Score=29.08 Aligned_cols=87 Identities=23% Similarity=0.301 Sum_probs=53.4
Q ss_pred cccccCceeccCCcc-ccc-CCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhh
Q 009691 53 NYYIPNYILVSGSEV-QRS-SLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFK 130 (528)
Q Consensus 53 ~~~ip~~~~~~~~~~-~~~-~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~~l~~l~ 130 (528)
.|..|..++....+- ... ....-.++++.+---| -+..-+..+....|...+++.+..-.|...++.+.+.++=.+
T Consensus 5 ~y~nPTki~FGkg~i~~l~~ei~~~~kVLi~YGGGS--IKrnGvydqV~~~Lkg~~~~E~~GVEPNP~~~Tv~kaV~i~k 82 (384)
T COG1979 5 TYHNPTKILFGKGQIAELREEIPKDAKVLIVYGGGS--IKKNGVYDQVVEALKGIEVIEFGGVEPNPRLETLMKAVEICK 82 (384)
T ss_pred cccCCceEEecCchHHHHHhhccccCeEEEEecCcc--ccccchHHHHHHHhcCceEEEecCCCCCchHHHHHHHHHHHH
Confidence 467799988876441 111 1122277888885322 223346778888888888888876567766666666664222
Q ss_pred hccchhhhhhccC-cEEEEEcC
Q 009691 131 AAGDVFASEIEKR-LRLIVAGG 151 (528)
Q Consensus 131 ~~~~~~a~~~~~~-~~IIV~GG 151 (528)
++. ..|+++||
T Consensus 83 ----------ee~idflLAVGG 94 (384)
T COG1979 83 ----------EENIDFLLAVGG 94 (384)
T ss_pred ----------HcCceEEEEecC
Confidence 233 35888888
No 123
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=24.12 E-value=91 Score=35.35 Aligned_cols=74 Identities=19% Similarity=0.380 Sum_probs=43.0
Q ss_pred EEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEeeCCCCcchh-----hccCCCCCCCCChhHHHHHHHHHH-HcCCee
Q 009691 145 RLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP-----FSFGWGKKNPNTDQQAVLSFLEQV-KNAKEM 215 (528)
Q Consensus 145 ~IIV~GGDGTV~~Vl~~---l~~~~~~~~~plgiIPlGTGNDlA-----R~LGwg~~~~~~~~~~~~~~l~~I-~~a~~~ 215 (528)
.+|++|||||..-+... +.+. ...+++--||-==-||+. .++|..+ ...-..+++..| ..+...
T Consensus 167 ~LviIGGd~S~~~A~~Lae~~~~~--~~~i~VIGIPkTIDNDl~~~~id~s~GFdT-----A~~~~~~~I~~i~~Da~s~ 239 (555)
T PRK07085 167 GLVIIGGDDSNTNAAILAEYFAKH--GCKTQVIGVPKTIDGDLKNEFIETSFGFDT-----ATKTYSEMIGNISRDALSA 239 (555)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHh--CCCccEEEEeeeecCCCCCCcccccCCHHH-----HHHHHHHHHHHHHHHHHhc
Confidence 59999999998755432 2221 246788888988899997 3455442 112233455555 223222
Q ss_pred eEeEEEEeeee
Q 009691 216 QIDSWHILMRM 226 (528)
Q Consensus 216 ~iD~w~V~~~~ 226 (528)
. .+|.+.-.|
T Consensus 240 ~-~~~~~VevM 249 (555)
T PRK07085 240 K-KYWHFIKLM 249 (555)
T ss_pred C-CcEEEEEEC
Confidence 2 456665444
No 124
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=24.01 E-value=1.9e+02 Score=26.13 Aligned_cols=51 Identities=20% Similarity=0.121 Sum_probs=34.2
Q ss_pred EEEcCchHHHHHHHHHhcCCC-CCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHH
Q 009691 147 IVAGGDGTASWLLGVVSDLKL-PHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVK 210 (528)
Q Consensus 147 IV~GGDGTV~~Vl~~l~~~~~-~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~ 210 (528)
|-++..+|..+.+..|.++.. ...+.+.+|=+|| ||.. ..++++++++.+.
T Consensus 26 i~a~~g~~~~~~~~~l~~~~~~~~~~d~vvi~lGt-Nd~~------------~~~nl~~ii~~~~ 77 (150)
T cd01840 26 IDAKVGRQMSEAPDLIRQLKDSGKLRKTVVIGLGT-NGPF------------TKDQLDELLDALG 77 (150)
T ss_pred EEeeecccHHHHHHHHHHHHHcCCCCCeEEEEecC-CCCC------------CHHHHHHHHHHcC
Confidence 344445666788877754321 2467899999999 8872 1257888888774
No 125
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes []. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6- bisphosphate, a key regulatory step in the glycolytic pathway [, ]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains []). PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (alpha/beta) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6- bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react []. Deficiency in PFK leads to glycogenosis type VII (Tauri's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise []. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [].; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005945 6-phosphofructokinase complex; PDB: 3O8O_E 3OPY_H 1PFK_A 2PFK_D 1MTO_F 3U39_C 6PFK_A 4PFK_A 3PFK_A 3HNO_B ....
Probab=23.31 E-value=60 Score=33.43 Aligned_cols=39 Identities=36% Similarity=0.451 Sum_probs=29.2
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhh
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPF 186 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR 186 (528)
..+|++|||||+.-+. .|.+. ..+++-.||-=--||+.-
T Consensus 94 d~Li~IGG~gs~~~a~-~L~~~---~~i~vigiPkTIDNDi~g 132 (282)
T PF00365_consen 94 DALIVIGGDGSMKGAH-KLSEE---FGIPVIGIPKTIDNDIPG 132 (282)
T ss_dssp SEEEEEESHHHHHHHH-HHHHH---HHSEEEEEEEETTSSCTT
T ss_pred CEEEEecCCCHHHHHH-HHHhc---CceEEEEEeccccCCcCC
Confidence 3699999999977653 44421 237888899988999985
No 126
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=22.95 E-value=4.5e+02 Score=31.45 Aligned_cols=98 Identities=16% Similarity=0.130 Sum_probs=44.3
Q ss_pred ccccccCceeccCCc-ccccC-CCCCCeEEEEEcCcCCCCChhhHHHHHHHHhc--cC--cEEEEeecCchhHHHHHHHH
Q 009691 52 NNYYIPNYILVSGSE-VQRSS-LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLN--EN--QVIDLGEKAPDKVLHQLYVT 125 (528)
Q Consensus 52 ~~~~ip~~~~~~~~~-~~~~~-~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~--~~--qV~dL~~~~p~~~l~~~~~~ 125 (528)
+-|..|+.++..+.. ..+.. -...++++||..+..- ...+++.+.+.|. .. .++.+....|..-++.+.+.
T Consensus 455 ~~~~~P~~i~~G~g~l~~l~~~l~~~~~~lvVtd~~~~---~~g~~~~v~~~L~~~~~~i~~~~~~~v~~np~~~~v~~~ 531 (862)
T PRK13805 455 QWFKVPKKIYFERGSLPYLLDELDGKKRAFIVTDRFMV---ELGYVDKVTDVLKKRENGVEYEVFSEVEPDPTLSTVRKG 531 (862)
T ss_pred eeeecCCeEEECCCHHHHHHHHhcCCCEEEEEECcchh---hcchHHHHHHHHhcccCCCeEEEeCCCCCCcCHHHHHHH
Confidence 336667776655422 00100 0123677777754331 1225666777665 22 23222221222222222232
Q ss_pred HHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHH
Q 009691 126 LEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVV 162 (528)
Q Consensus 126 l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l 162 (528)
++.++ + .+.+.||++|| |++.-+...+
T Consensus 532 ~~~~~--------~-~~~D~IIaiGG-GSviD~AK~i 558 (862)
T PRK13805 532 AELMR--------S-FKPDTIIALGG-GSPMDAAKIM 558 (862)
T ss_pred HHHHH--------h-cCCCEEEEeCC-chHHHHHHHH
Confidence 22111 1 23456888887 7777666554
No 127
>PTZ00287 6-phosphofructokinase; Provisional
Probab=22.25 E-value=2e+02 Score=36.17 Aligned_cols=46 Identities=22% Similarity=0.262 Sum_probs=29.3
Q ss_pred cEEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCCcchhh-----ccCCC
Q 009691 144 LRLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIPF-----SFGWG 191 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~---~l~~~~~~~~~plgiIPlGTGNDlAR-----~LGwg 191 (528)
..+||+|||||+.-..- .+.+.+ .+..+--||-==-||+.. ++|..
T Consensus 930 D~LVvIGGDgS~t~A~~LaE~f~~~g--i~i~VIGVPkTIDNDL~~~~tD~TiGFD 983 (1419)
T PTZ00287 930 NGLVMPGSNVTITEAALLAEYFLEKK--IPTSVVGIPLTGSNNLIHELIETCVGFD 983 (1419)
T ss_pred CEEEEECCchHHHHHHHHHHHHHhcC--CCccEEEeCceeeCCCCCCCCcCCCCHH
Confidence 35999999999865432 122211 223366678877999986 55554
No 128
>cd08191 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. 6-hydroxyhexanoate dehydrogenase (HHD). The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. Some bacteria can grow on cyclic ketones, cyclohexylamine, and alcohols as sole carbon source. Cyclohexylamine is an insecticide and antiseptic in various industries and is considered a possible environmental pollutant. The degradation of these chemical compounds are through the cyclohexanol and cyclohexanone biological oxidation pathway. The intermediates of this pathway include cyclohexanol, cyclohexanone, e-caprolactone, 6-hydroxyhexanoate, 6-oxohexanoate and adipate. The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate.
Probab=22.24 E-value=4.2e+02 Score=28.29 Aligned_cols=48 Identities=25% Similarity=0.228 Sum_probs=29.9
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEeeC--CCCcchhhccCC
Q 009691 142 KRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNIPFSFGW 190 (528)
Q Consensus 142 ~~~~IIV~GGDGTV~~Vl~~l~~~~---------------~~~~~plgiIPl--GTGNDlAR~LGw 190 (528)
+.+.||++|| |++.-+...+.-+- ....+|+..||- |||-...+.--+
T Consensus 79 ~~D~IIaiGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTtagTGSE~t~~avi 143 (386)
T cd08191 79 GPDVIIGLGG-GSCIDLAKIAGLLLAHGGDVRDYYGEFKVPGPVLPLIAVPTTAGTGSEVTPVAVL 143 (386)
T ss_pred CCCEEEEeCC-chHHHHHHHHHHHHhCCCCHHHHhCccccCCCCCCEEEEeCCCcchhhhCCeEEE
Confidence 3456888887 78777776553210 012578888884 787766665443
No 129
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=22.22 E-value=4.5e+02 Score=26.56 Aligned_cols=35 Identities=20% Similarity=0.030 Sum_probs=24.3
Q ss_pred hhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 135 VFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 135 ~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
+++.-....+.+|.+|| +|+.|++. ..+|.-++|.
T Consensus 234 ~m~~lm~~aDl~Is~~G-~T~~E~~a--------~g~P~i~i~~ 268 (279)
T TIGR03590 234 NMAELMNEADLAIGAAG-STSWERCC--------LGLPSLAICL 268 (279)
T ss_pred HHHHHHHHCCEEEECCc-hHHHHHHH--------cCCCEEEEEe
Confidence 34444455667888999 99999873 2467777776
No 130
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=21.86 E-value=1.2e+02 Score=28.75 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=26.7
Q ss_pred CCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcC
Q 009691 169 HSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNA 212 (528)
Q Consensus 169 ~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a 212 (528)
.+|-+.+|=+|| ||+.+.++++. ..-..++.++++.+.+.
T Consensus 78 ~~pd~vii~lGt-ND~~~~~~~~~---~~~~~~l~~lv~~i~~~ 117 (208)
T cd01839 78 SPLDLVIIMLGT-NDLKSYFNLSA---AEIAQGLGALVDIIRTA 117 (208)
T ss_pred CCCCEEEEeccc-cccccccCCCH---HHHHHHHHHHHHHHHhc
Confidence 467799999999 99887655542 11234566777777654
No 131
>PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional
Probab=21.51 E-value=3.6e+02 Score=30.41 Aligned_cols=42 Identities=19% Similarity=0.148 Sum_probs=25.4
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcchhh
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPF 186 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPl--GTGNDlAR 186 (528)
...||++|| |++.-++..+... ....+|+..||- -..+|-+-
T Consensus 270 ~D~IIAIGG-Gsv~D~AKfvA~~-y~rGi~~i~vPTTllA~vDss~ 313 (542)
T PRK14021 270 SDAIVGLGG-GAATDLAGFVAAT-WMRGIRYVNCPTSLLAMVDAST 313 (542)
T ss_pred CcEEEEEcC-hHHHHHHHHHHHH-HHcCCCEEEeCChHHhhhcccc
Confidence 345666666 8888888766531 114678888886 33444433
No 132
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=20.69 E-value=4.5e+02 Score=24.86 Aligned_cols=77 Identities=18% Similarity=0.259 Sum_probs=41.3
Q ss_pred CCCChhhHHHHHHHHhccCcE-EEEeec----CchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHH
Q 009691 87 GGQLGGKLLLTYRSLLNENQV-IDLGEK----APDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGV 161 (528)
Q Consensus 87 Gg~~g~~ll~~~~~~L~~~qV-~dL~~~----~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~ 161 (528)
|+..-..+.++....|....| |++... .|+...+ +.+..+ +..-...|.++|+.+-+.-|+.+
T Consensus 6 GS~SD~~~~~~a~~~L~~~gi~~dv~V~SaHRtp~~~~~-~~~~a~-----------~~g~~viIa~AG~aa~Lpgvva~ 73 (156)
T TIGR01162 6 GSDSDLPTMKKAADILEEFGIPYELRVVSAHRTPELMLE-YAKEAE-----------ERGIKVIIAGAGGAAHLPGMVAA 73 (156)
T ss_pred CcHhhHHHHHHHHHHHHHcCCCeEEEEECcccCHHHHHH-HHHHHH-----------HCCCeEEEEeCCccchhHHHHHh
Confidence 333334556666666665555 665432 3333322 222211 00113457888999999998887
Q ss_pred HhcCCCCCCCCEEEeeCCCC
Q 009691 162 VSDLKLPHSPPVATVPLGTG 181 (528)
Q Consensus 162 l~~~~~~~~~plgiIPlGTG 181 (528)
+.. .|.|| +|.-++
T Consensus 74 ~t~-----~PVIg-vP~~~~ 87 (156)
T TIGR01162 74 LTP-----LPVIG-VPVPSK 87 (156)
T ss_pred ccC-----CCEEE-ecCCcc
Confidence 643 34455 477654
No 133
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=20.24 E-value=1.6e+02 Score=28.16 Aligned_cols=59 Identities=25% Similarity=0.384 Sum_probs=34.3
Q ss_pred EEEEcCchHHHHHHHHHhcCCC-CCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHc
Q 009691 146 LIVAGGDGTASWLLGVVSDLKL-PHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 211 (528)
Q Consensus 146 IIV~GGDGTV~~Vl~~l~~~~~-~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~ 211 (528)
=..++||.|-. ++..+....+ ..+|-+.+|=+|| ||+.+.. +. .....++.++++.+..
T Consensus 65 N~Gi~G~tt~~-~l~r~~~~~l~~~~pd~VvI~~G~-ND~~~~~--~~---~~~~~~l~~ii~~l~~ 124 (214)
T cd01820 65 NFGIGGDRTQN-VLWRLENGELDGVNPKVVVLLIGT-NNIGHTT--TA---EEIAEGILAIVEEIRE 124 (214)
T ss_pred eeeeccccHhH-HHHHHhcCCccCCCCCEEEEEecc-cccCCCC--CH---HHHHHHHHHHHHHHHH
Confidence 35889998744 4433432112 2467899999999 9986543 11 1112456666766654
Done!