Query 009691
Match_columns 528
No_of_seqs 196 out of 1529
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 10:53:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009691.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009691hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s40_A Diacylglycerol kinase; 100.0 4.7E-44 1.6E-48 365.5 27.5 285 73-473 6-300 (304)
2 2qv7_A Diacylglycerol kinase D 100.0 2E-39 6.9E-44 335.5 27.9 285 75-474 24-319 (337)
3 2bon_A Lipid kinase; DAG kinas 100.0 1.4E-39 4.7E-44 336.4 26.4 284 75-473 29-319 (332)
4 2an1_A Putative kinase; struct 99.3 2.3E-11 7.7E-16 122.8 14.8 115 75-215 5-122 (292)
5 1yt5_A Inorganic polyphosphate 99.2 1.6E-11 5.5E-16 122.2 8.6 98 77-215 2-99 (258)
6 1u0t_A Inorganic polyphosphate 99.1 2.9E-09 1E-13 108.5 16.7 126 75-216 4-135 (307)
7 2i2c_A Probable inorganic poly 99.0 6.9E-09 2.4E-13 104.0 15.8 99 77-220 2-101 (272)
8 3afo_A NADH kinase POS5; alpha 97.8 0.00012 4.1E-09 76.8 11.7 158 46-223 11-182 (388)
9 1z0s_A Probable inorganic poly 94.0 0.092 3.1E-06 52.5 7.1 54 143-211 69-122 (278)
10 3pfn_A NAD kinase; structural 93.4 1.1 3.6E-05 46.5 14.1 146 60-223 24-175 (365)
11 3hl0_A Maleylacetate reductase 78.1 5.7 0.00019 40.6 8.4 105 56-178 11-119 (353)
12 3jzd_A Iron-containing alcohol 74.1 8.5 0.00029 39.3 8.4 85 76-178 37-121 (358)
13 1oj7_A Hypothetical oxidoreduc 69.6 17 0.00059 37.5 9.7 122 53-188 26-171 (408)
14 2gru_A 2-deoxy-scyllo-inosose 65.6 11 0.00038 38.5 7.1 92 75-178 34-128 (368)
15 3uhj_A Probable glycerol dehyd 65.6 9.9 0.00034 39.3 6.8 109 50-178 24-138 (387)
16 3okf_A 3-dehydroquinate syntha 64.2 14 0.00048 38.3 7.6 93 74-178 61-157 (390)
17 1o2d_A Alcohol dehydrogenase, 63.5 66 0.0023 32.6 12.5 99 76-186 41-158 (371)
18 3ox4_A Alcohol dehydrogenase 2 57.5 37 0.0013 34.7 9.4 120 53-185 5-147 (383)
19 1sg6_A Pentafunctional AROM po 54.8 8.4 0.00029 39.8 4.0 40 144-185 107-148 (393)
20 3qbe_A 3-dehydroquinate syntha 54.7 18 0.00062 37.1 6.4 90 76-178 44-137 (368)
21 1pfk_A Phosphofructokinase; tr 52.7 29 0.00098 35.0 7.4 37 144-185 96-132 (320)
22 3iv7_A Alcohol dehydrogenase I 51.5 25 0.00087 35.9 6.9 83 76-178 38-120 (364)
23 3clh_A 3-dehydroquinate syntha 48.7 12 0.00041 37.9 3.8 92 75-178 26-119 (343)
24 1ujn_A Dehydroquinate synthase 47.2 31 0.0011 34.8 6.7 90 75-178 28-118 (348)
25 3kuu_A Phosphoribosylaminoimid 46.8 1.3E+02 0.0045 27.6 10.1 92 71-180 7-100 (174)
26 1zxx_A 6-phosphofructokinase; 45.3 30 0.001 34.8 6.2 37 144-185 95-131 (319)
27 4hf7_A Putative acylhydrolase; 44.1 11 0.00039 34.4 2.6 61 147-211 56-116 (209)
28 1xmp_A PURE, phosphoribosylami 42.8 1E+02 0.0035 28.2 8.6 89 76-181 11-100 (170)
29 1o4v_A Phosphoribosylaminoimid 42.7 1.6E+02 0.0056 27.2 10.1 89 76-181 13-102 (183)
30 3oow_A Phosphoribosylaminoimid 42.6 1.9E+02 0.0065 26.3 10.4 81 87-181 13-94 (166)
31 4grd_A N5-CAIR mutase, phospho 40.5 2E+02 0.0069 26.3 10.3 86 78-181 15-101 (173)
32 3ors_A N5-carboxyaminoimidazol 40.3 1.2E+02 0.0041 27.5 8.7 86 78-181 6-92 (163)
33 3bfj_A 1,3-propanediol oxidore 40.0 1.6E+02 0.0055 29.8 10.8 124 53-187 7-153 (387)
34 4a3s_A 6-phosphofructokinase; 38.8 45 0.0015 33.5 6.2 37 144-185 95-131 (319)
35 1xah_A Sadhqs, 3-dehydroquinat 37.1 26 0.00089 35.4 4.3 90 76-178 32-124 (354)
36 3lp6_A Phosphoribosylaminoimid 36.4 1.5E+02 0.005 27.3 8.7 88 77-182 9-97 (174)
37 2hig_A 6-phospho-1-fructokinas 36.3 25 0.00086 37.5 4.1 40 144-185 191-233 (487)
38 1jq5_A Glycerol dehydrogenase; 35.7 66 0.0022 32.5 7.0 112 52-184 5-126 (370)
39 3rf7_A Iron-containing alcohol 34.6 1.8E+02 0.0061 29.6 10.1 115 50-178 21-159 (375)
40 3hbm_A UDP-sugar hydrolase; PS 34.0 88 0.003 30.6 7.4 35 135-178 218-252 (282)
41 1ta9_A Glycerol dehydrogenase; 33.0 74 0.0025 33.4 7.0 111 48-178 60-177 (450)
42 3dc7_A Putative uncharacterize 31.8 23 0.0008 32.4 2.7 65 145-212 56-126 (232)
43 1u11_A PURE (N5-carboxyaminoim 31.7 2E+02 0.0069 26.5 8.8 87 77-181 23-110 (182)
44 1vlj_A NADH-dependent butanol 30.4 2E+02 0.0068 29.4 9.7 122 53-186 17-161 (407)
45 3gw6_A Endo-N-acetylneuraminid 29.6 16 0.00054 36.0 1.1 15 143-157 46-60 (275)
46 3trh_A Phosphoribosylaminoimid 28.8 3.3E+02 0.011 24.7 10.1 80 87-180 14-94 (169)
47 3ce9_A Glycerol dehydrogenase; 27.5 89 0.0031 31.2 6.4 85 76-181 35-123 (354)
48 2ywx_A Phosphoribosylaminoimid 27.4 1.6E+02 0.0055 26.5 7.2 76 87-179 7-83 (157)
49 2x9a_A Attachment protein G3P; 27.2 15 0.00052 28.1 0.3 10 146-155 41-50 (65)
50 2f48_A Diphosphate--fructose-6 25.7 62 0.0021 35.1 5.0 40 144-185 168-210 (555)
51 4b4k_A N5-carboxyaminoimidazol 24.3 2.9E+02 0.0099 25.5 8.4 88 75-180 21-110 (181)
52 1rrm_A Lactaldehyde reductase; 23.8 1.3E+02 0.0045 30.4 6.8 120 53-185 5-149 (386)
53 2q0q_A ARYL esterase; SGNH hyd 21.5 1E+02 0.0035 27.3 5.0 38 172-213 85-122 (216)
54 1sfu_A 34L protein; protein/Z- 21.4 43 0.0015 26.6 1.9 32 180-218 31-63 (75)
55 1ivn_A Thioesterase I; hydrola 21.1 57 0.0019 28.7 3.0 37 170-212 62-98 (190)
56 3lhl_A Putative agmatinase; pr 21.0 2.6E+02 0.0087 27.3 8.1 42 142-187 87-129 (287)
No 1
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=100.00 E-value=4.7e-44 Score=365.55 Aligned_cols=285 Identities=19% Similarity=0.176 Sum_probs=205.6
Q ss_pred CCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEe-ecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 009691 73 IPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 150 (528)
Q Consensus 73 ~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~-~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~G 150 (528)
...++++||+||+||++++.++++.+++.|....+ +++. ...++++.+ +.+.+. .+...||++|
T Consensus 6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~-~~~~~~-------------~~~d~vv~~G 71 (304)
T 3s40_A 6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATK-YCQEFA-------------SKVDLIIVFG 71 (304)
T ss_dssp CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHHH-HHHHHT-------------TTCSEEEEEE
T ss_pred CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHHH-HHHHhh-------------cCCCEEEEEc
Confidence 34578999999999999999999999998876543 3332 245666654 322211 2346899999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCC
Q 009691 151 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPK 230 (528)
Q Consensus 151 GDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~ 230 (528)
|||||++|+++|... ..++|||+||+||||||||+|||+. ++.++++.|.+++++.+|+|+++-
T Consensus 72 GDGTl~~v~~~l~~~--~~~~~l~iiP~Gt~N~~ar~lg~~~--------~~~~a~~~i~~g~~~~iDlg~v~~------ 135 (304)
T 3s40_A 72 GDGTVFECTNGLAPL--EIRPTLAIIPGGTCNDFSRTLGVPQ--------NIAEAAKLITKEHVKPVDVAKANG------ 135 (304)
T ss_dssp CHHHHHHHHHHHTTC--SSCCEEEEEECSSCCHHHHHTTCCS--------SHHHHHHHHTTCCEEEEEEEEETT------
T ss_pred cchHHHHHHHHHhhC--CCCCcEEEecCCcHHHHHHHcCCCc--------cHHHHHHHHHhCCeEEEEEEEECC------
Confidence 999999999999763 3578999999999999999999985 577889999999999999998840
Q ss_pred CCCCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHH
Q 009691 231 EGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKL 310 (528)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~ 310 (528)
++|+|++|+|+||+|++.++..++ +..|+++|++.
T Consensus 136 -------------------------------------~~F~~~~~~G~da~v~~~~~~~~k--------~~~G~~~Y~~~ 170 (304)
T 3s40_A 136 -------------------------------------QHFLNFWGIGLVSEVSNNIDAEEK--------AKLGKIGYYLS 170 (304)
T ss_dssp -------------------------------------EEESSEEEEC--------------------------CHHHHTT
T ss_pred -------------------------------------EEEEEEEeehHHHHHHHhcCHHHh--------hcCCchHHHHH
Confidence 379999999999999998875443 45789999999
Q ss_pred HHhhhcccccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcC
Q 009691 311 AGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVD 390 (528)
Q Consensus 311 glk~~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~d 390 (528)
+++. ++. +++ ..++|++ ||+ .++. +...++|+|+++||||+.++|. ++++
T Consensus 171 ~l~~------l~~--~~~--~~~~i~~---dg~--~~~~--~~~~v~v~N~~~~Ggg~~~~p~-------------a~~~ 220 (304)
T 3s40_A 171 TIRT------VKN--AET--FPVKITY---DGQ--VYED--EAVLVMVGNGEYLGGIPSFIPN-------------VKCD 220 (304)
T ss_dssp TC--------------CC--EEEEEEE---TTE--EEEE--EEEEEEEECSSEETTEECSSTT-------------CCTT
T ss_pred HHHH------Hhh--cCC--ceEEEEE---CCE--EEEe--EEEEEEEECCCcCCCCcccCCC-------------CcCC
Confidence 9888 653 233 2466777 776 3333 5678999999999999999874 7899
Q ss_pred CCcEEEEEecchhH--HHHHHh------cCCCcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEEe
Q 009691 391 DGLLEIVGFRDAWH--GLVLLA------PNGHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISH 462 (528)
Q Consensus 391 DG~LEVv~v~~~~~--~~~ll~------~~~~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~ 462 (528)
||+|||++++.... +..++. ...+.+++.|+++|+|+..+ ++++|+|||++... |++|+|.+
T Consensus 221 DG~Ldv~~v~~~~~~~l~~l~~~~~~g~~~~~~v~~~~~~~v~i~~~~----~~~~~~DGE~~~~~------p~~i~v~p 290 (304)
T 3s40_A 221 DGTLDIFVVKSTGIQAFKDYIGKKLFEDSNENDIFHVKAKSIHIETEE----EKEVDTDGESSLHT------PCQIELLQ 290 (304)
T ss_dssp SSCEEEEEEETTCHHHHHHHTTCCCSSCCCTTTEEEEEESEEEEEESS----CCEEEEC--CCEES------SEEEEEEE
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHhcCCCCCCcEEEEEccEEEEEeCC----CcEEEeCCCCCCCc------eEEEEEEC
Confidence 99999999998753 222221 12356889999999999876 79999999999764 89999997
Q ss_pred CceeeEEeCCC
Q 009691 463 LRQVNMLATPC 473 (528)
Q Consensus 463 ~~~v~mL~~~~ 473 (528)
++++|+++++
T Consensus 291 -~al~v~~p~~ 300 (304)
T 3s40_A 291 -GHFTMIYNPA 300 (304)
T ss_dssp -EEEEEECCTT
T ss_pred -CeEEEEechh
Confidence 5899999863
No 2
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=100.00 E-value=2e-39 Score=335.51 Aligned_cols=285 Identities=16% Similarity=0.128 Sum_probs=211.2
Q ss_pred CCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEee-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009691 75 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 152 (528)
Q Consensus 75 ~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~-~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGD 152 (528)
.++++||+||+||++++.++++.+++.|....+ +.+.. ..++++.+ +.+... ..+...|||+|||
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a~~-~~~~~~------------~~~~d~vvv~GGD 90 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATL-EAERAM------------HENYDVLIAAGGD 90 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHHH-HHHHHT------------TTTCSEEEEEECH
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcchHHH-HHHHHh------------hcCCCEEEEEcCc
Confidence 467999999999999998999999999987654 33332 34455433 222210 1234689999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCC
Q 009691 153 GTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 232 (528)
Q Consensus 153 GTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~g 232 (528)
|||++|+++|.+. ...+|||+||+||||||||+|||+. ++.++++.|.+++.+.+|+|+++
T Consensus 91 GTv~~v~~~l~~~--~~~~pl~iIP~GT~N~lAr~Lg~~~--------~~~~al~~i~~g~~~~iD~g~v~--------- 151 (337)
T 2qv7_A 91 GTLNEVVNGIAEK--PNRPKLGVIPMGTVNDFGRALHIPN--------DIMGALDVIIEGHSTKVDIGKMN--------- 151 (337)
T ss_dssp HHHHHHHHHHTTC--SSCCEEEEEECSSCCHHHHHTTCCS--------SHHHHHHHHHHTCEEEEEEEEET---------
T ss_pred hHHHHHHHHHHhC--CCCCcEEEecCCcHhHHHHHcCCCC--------CHHHHHHHHHcCCcEEEEEEEEC---------
Confidence 9999999999542 3679999999999999999999985 57788999999999999999873
Q ss_pred CCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHHH
Q 009691 233 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 312 (528)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~gl 312 (528)
+ ++|+|++++|+||+|+..++..++ +..++++|+..++
T Consensus 152 ----------------------------~------r~fl~~~~~G~~a~v~~~~~~~~k--------~~~G~~~Y~~~~l 189 (337)
T 2qv7_A 152 ----------------------------N------RYFINLAAGGQLTQVSYETPSKLK--------SIVGPFAYYIKGF 189 (337)
T ss_dssp ----------------------------T------EEESSEEEEECBCC---------------------CGGGSCCCTT
T ss_pred ----------------------------C------EEEEEEeeecccHHHHHHhhHHHH--------hccChHHHHHHHH
Confidence 0 369999999999999988875543 4568899999888
Q ss_pred hhhcccccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCCC
Q 009691 313 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDG 392 (528)
Q Consensus 313 k~~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG 392 (528)
+. ++. ++.+ .++|++ ||+ .++ .+...+++.|++++|||..++|. +.++||
T Consensus 190 ~~------l~~--~~~~--~~~i~~---dg~--~~~--~~~~~v~v~n~~~~gGg~~i~P~-------------a~~~DG 239 (337)
T 2qv7_A 190 EM------LPQ--MKAV--DLRIEY---DGN--VFQ--GEALLFFLGLTNSMAGFEKLVPD-------------AKLDDG 239 (337)
T ss_dssp TT------GGG--BCCE--EEEEEE---TTE--EEE--EEEEEEEEESSCCCSSCSCSSTT-------------CCSSSS
T ss_pred HH------HHh--CCCc--cEEEEE---CCE--EEE--eeEEEEEEECCCCCCCCCccCCC-------------CcCCCC
Confidence 87 542 2322 466777 776 333 25678888999999999999874 789999
Q ss_pred cEEEEEecchhH--HHHHH--hcC-----CCcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEEeC
Q 009691 393 LLEIVGFRDAWH--GLVLL--APN-----GHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHL 463 (528)
Q Consensus 393 ~LEVv~v~~~~~--~~~ll--~~~-----~~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~~ 463 (528)
+|||++++.... ++.++ +.. ...+++.++++|+|+..+ ++++|+|||++... |+.|++.+
T Consensus 240 ~ldv~~v~~~~~~~l~~~~~~v~~g~~~~~~~v~~~~~~~i~i~~~~----~~~~~iDGE~~~~~------~i~i~v~p- 308 (337)
T 2qv7_A 240 YFTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSFT----DLQLNVDGEYGGKL------PANFLNLE- 308 (337)
T ss_dssp CEEEEEEECCCHHHHHHHHHHHTTTCGGGSTTEEEEEESEEEEECSS----CCEEEETTEEEEES------CEEEEEEE-
T ss_pred eEEEEEEccCCHHHHHHHHHHHhcCCccCCCCEEEEEeeEEEEEECC----CCeEEECCCcCCCC------cEEEEEEc-
Confidence 999999998642 32221 222 256889999999998754 68999999999763 79999996
Q ss_pred ceeeEEeCCCC
Q 009691 464 RQVNMLATPCC 474 (528)
Q Consensus 464 ~~v~mL~~~~~ 474 (528)
+.++++++...
T Consensus 309 ~~l~v~~p~~~ 319 (337)
T 2qv7_A 309 RHIDVFAPNDI 319 (337)
T ss_dssp EEEEEECCTTS
T ss_pred CeEEEEecCcc
Confidence 58999997644
No 3
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=100.00 E-value=1.4e-39 Score=336.41 Aligned_cols=284 Identities=17% Similarity=0.149 Sum_probs=206.8
Q ss_pred CCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEee-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009691 75 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 152 (528)
Q Consensus 75 ~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~-~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGD 152 (528)
.++++||+||+||++ +.++.+.+.|....+ +.+.. ..++++.+ +.+... ..+...|||+|||
T Consensus 29 ~~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~~~~~~-~~~~~~------------~~~~d~vvv~GGD 92 (332)
T 2bon_A 29 FPASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEKGDAAR-YVEEAR------------KFGVATVIAGGGD 92 (332)
T ss_dssp -CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCSTTHHHH-HHHHHH------------HHTCSEEEEEESH
T ss_pred cceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCcchHHH-HHHHHH------------hcCCCEEEEEccc
Confidence 367999999999976 567778887775443 33322 34555433 222211 1234689999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEEEEeeeecCCCCC
Q 009691 153 GTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 232 (528)
Q Consensus 153 GTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~~~~~~~~~g 232 (528)
|||++|+++|.+......+|||+||+||+|||||+|||+. ++.++++.|.+++.+.+|+|+++-
T Consensus 93 GTl~~v~~~l~~~~~~~~~plgiiP~Gt~N~fa~~l~i~~--------~~~~al~~i~~g~~~~iDlg~v~~-------- 156 (332)
T 2bon_A 93 GTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPE--------ALDKALKLAIAGDAIAIDMAQVNK-------- 156 (332)
T ss_dssp HHHHHHHHHHHHCCSSCCCEEEEEECSSSCHHHHHTTCCS--------SHHHHHHHHHHSEEEEEEEEEETT--------
T ss_pred hHHHHHHHHHhhcccCCCCeEEEecCcCHHHHHHhcCCCC--------CHHHHHHHHHcCCeEEeeEEEECC--------
Confidence 9999999999843223578999999999999999999985 577889999999999999998740
Q ss_pred CCCCCCCCCCCcccccccccccccccccCCcceeccceeEEeecchhHHHHhHHHhhcccCchhhhhccchhHHHHHHHH
Q 009691 233 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 312 (528)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~gl 312 (528)
+++|+|++|+|+||+|+..+++.++ +..|+++|++.++
T Consensus 157 ----------------------------------r~~fl~~~~~G~da~v~~~~~~~~k--------~~~G~~~Y~~~~l 194 (332)
T 2bon_A 157 ----------------------------------QTCFINMATGGFGTRITTETPEKLK--------AALGSVSYIIHGL 194 (332)
T ss_dssp ----------------------------------SCEESSEEEEEEEEEC------------------CCHHHHHHHHHT
T ss_pred ----------------------------------ceEEEEEEeECccHHHHHHhhHHhH--------hcccHHHHHHHHH
Confidence 0269999999999999987764433 4568999999998
Q ss_pred hhhcccccccCCCCCCCcceEEEEEEecCCcEEEEEeccceeEEEEEcCCCCCCCCCCCCCCccccccccCCCCCCcCCC
Q 009691 313 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDG 392 (528)
Q Consensus 313 k~~~~~~~l~~~~~k~l~~~i~l~vd~~dg~~~~v~lp~~i~~ivvlN~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG 392 (528)
+. ++. .+.+ .++|++ ||+ .++. +...++++|+++||||+.+||. +.++||
T Consensus 195 ~~------l~~--~~~~--~~~i~~---dg~--~~~~--~~~~v~v~N~~~~ggg~~i~P~-------------a~~~DG 244 (332)
T 2bon_A 195 MR------MDT--LQPD--RCEIRG---ENF--HWQG--DALVIGIGNGRQAGGGQQLCPN-------------ALINDG 244 (332)
T ss_dssp SC------EEE--EECE--EEEEEE---TTE--EEEE--EESEEEEESSSCBTTTBCSCTT-------------CCTTSS
T ss_pred HH------Hhh--CCCe--eEEEEE---CCE--EEEE--EEEEEEEECCCccCCCcccCCC-------------CCCCCC
Confidence 87 432 2222 456666 776 3332 5678888999999999999974 789999
Q ss_pred cEEEEEecchhHHHHHH--hcC---CCcceEEEecEEEEEEccCCCcceeeeecCCcCCCCCCCCCccEEEEEEeCceee
Q 009691 393 LLEIVGFRDAWHGLVLL--APN---GHGTRLAQANRVRFEFEKGAADHTFMRIDGEPWKQPLPVDEDTVVVEISHLRQVN 467 (528)
Q Consensus 393 ~LEVv~v~~~~~~~~ll--~~~---~~~~rl~Q~~~V~I~~~~~~~~~i~vqvDGE~~~~~~~~~~~p~~v~I~~~~~v~ 467 (528)
+|||++++...+++.++ +.. ...+++.++++|+|+..+ ++++|+|||++... |++|++.+ +.++
T Consensus 245 ~Ldv~iv~~~~~~l~~~~~~~~g~~~~~v~~~~~~~i~I~~~~----~~~~~iDGE~~~~~------~~~i~v~p-~al~ 313 (332)
T 2bon_A 245 LLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPH----DITFNLDGEPLSGQ------NFHIEILP-AALR 313 (332)
T ss_dssp CEEEEEECCSSCCHHHHHHHHTTCCCTTEEEEEESEEEEEEEE----EEEEEETTEEEEEE------EEEEEEEE-EEEE
T ss_pred eEEEEEECCHHHHHHHHHHHHcCCCCCcEEEEEeeEEEEEECC----CCeEEecCCCCCCc------eEEEEEEC-CeeE
Confidence 99999999873222211 111 256889999999999865 68999999999753 89999997 5899
Q ss_pred EEeCCC
Q 009691 468 MLATPC 473 (528)
Q Consensus 468 mL~~~~ 473 (528)
|+++..
T Consensus 314 vl~p~~ 319 (332)
T 2bon_A 314 CRLPPD 319 (332)
T ss_dssp EEECTT
T ss_pred EEeCCC
Confidence 999764
No 4
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=99.30 E-value=2.3e-11 Score=122.83 Aligned_cols=115 Identities=10% Similarity=-0.010 Sum_probs=67.9
Q ss_pred CCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhh--hhccCcEEEEEcC
Q 009691 75 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFAS--EIEKRLRLIVAGG 151 (528)
Q Consensus 75 ~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~--~~~~~~~IIV~GG 151 (528)
.++++||+||.++ ...+.+..+.+.|....+ +.+.... + ..+. .. ....++. ...+.+.||++||
T Consensus 5 mkki~ii~np~~~--~~~~~~~~i~~~l~~~g~~v~~~~~~---~-----~~~~-~~-~~~~~~~~~~~~~~D~vi~~GG 72 (292)
T 2an1_A 5 FKCIGIVGHPRHP--TALTTHEMLYRWLCDQGYEVIVEQQI---A-----HELQ-LK-NVPTGTLAEIGQQADLAVVVGG 72 (292)
T ss_dssp CCEEEEECC---------CHHHHHHHHHHHTTCEEEEEHHH---H-----HHTT-CS-SCCEECHHHHHHHCSEEEECSC
T ss_pred CcEEEEEEcCCCH--HHHHHHHHHHHHHHHCCCEEEEecch---h-----hhcc-cc-cccccchhhcccCCCEEEEEcC
Confidence 4679999999874 445677788887776543 2222110 0 0000 00 0000000 0123568999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCee
Q 009691 152 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 215 (528)
Q Consensus 152 DGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~ 215 (528)
|||++++++.+... ..|.||| |+||.|+|++. + +. ++.++++.+.+++.+
T Consensus 73 DGT~l~a~~~~~~~---~~P~lGI-~~Gt~gfla~~-~-~~--------~~~~al~~i~~g~~~ 122 (292)
T 2an1_A 73 DGNMLGAARTLARY---DINVIGI-NRGNLGFLTDL-D-PD--------NALQQLSDVLEGRYI 122 (292)
T ss_dssp HHHHHHHHHHHTTS---SCEEEEB-CSSSCCSSCCB-C-TT--------SHHHHHHHHHTTCEE
T ss_pred cHHHHHHHHHhhcC---CCCEEEE-ECCCcccCCcC-C-HH--------HHHHHHHHHHcCCCE
Confidence 99999999999763 2345777 89998888874 4 42 578899999988763
No 5
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=99.22 E-value=1.6e-11 Score=122.23 Aligned_cols=98 Identities=21% Similarity=0.232 Sum_probs=69.5
Q ss_pred eEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 009691 77 PVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 156 (528)
Q Consensus 77 pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~ 156 (528)
+++||+||.||.+ +.+++..+.+.|.. ++++. . + + . ...+.+.||++|||||++
T Consensus 2 ki~ii~Np~~~~~-~~~~~~~i~~~l~~---~~~~~-~--~--~----~-------------~~~~~D~vv~~GGDGTll 55 (258)
T 1yt5_A 2 KIAILYREEREKE-GEFLKEKISKEHEV---IEFGE-A--N--A----P-------------GRVTADLIVVVGGDGTVL 55 (258)
T ss_dssp EEEEEECGGGHHH-HHHHHHHHTTTSEE---EEEEE-S--S--S----C-------------SCBCCSEEEEEECHHHHH
T ss_pred EEEEEEeCCCchH-HHHHHHHHHHHhcC---Cceec-c--c--c----c-------------ccCCCCEEEEEeCcHHHH
Confidence 4889999999987 77888888887762 33332 1 1 0 0 012346899999999999
Q ss_pred HHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCee
Q 009691 157 WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 215 (528)
Q Consensus 157 ~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~ 215 (528)
++++.+.. ..|.+|| ++||.+.|+ .+. + .++.++++.+.+++.+
T Consensus 56 ~~a~~~~~----~~PilGI-n~G~~Gfl~-~~~-~--------~~~~~al~~i~~g~~~ 99 (258)
T 1yt5_A 56 KAAKKAAD----GTPMVGF-KAGRLGFLT-SYT-L--------DEIDRFLEDLRNWNFR 99 (258)
T ss_dssp HHHTTBCT----TCEEEEE-ESSSCCSSC-CBC-G--------GGHHHHHHHHHTTCCE
T ss_pred HHHHHhCC----CCCEEEE-ECCCCCccC-cCC-H--------HHHHHHHHHHHcCCce
Confidence 99987753 2344777 599996666 454 3 3788899999988764
No 6
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=99.05 E-value=2.9e-09 Score=108.46 Aligned_cols=126 Identities=15% Similarity=0.136 Sum_probs=70.9
Q ss_pred CCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHH--HHHHHHHHHhhhccchhhh---hhccCcEEEE
Q 009691 75 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVL--HQLYVTLEKFKAAGDVFAS---EIEKRLRLIV 148 (528)
Q Consensus 75 ~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l--~~~~~~l~~l~~~~~~~a~---~~~~~~~IIV 148 (528)
++.++||+||.++ .+.+.+..+.+.|....+ +.+......... ......+.........++. ..++.+.||+
T Consensus 4 m~ki~iI~n~~~~--~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi~ 81 (307)
T 1u0t_A 4 HRSVLLVVHTGRD--EATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLV 81 (307)
T ss_dssp -CEEEEEESSSGG--GGSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CCCEEE
T ss_pred CCEEEEEEeCCCH--HHHHHHHHHHHHHHHCCCEEEEecchhhhhhcccccccccccccccccccccccccccCCCEEEE
Confidence 4679999999986 445678888888876543 222221111100 0000000000000000000 0123467999
Q ss_pred EcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeee
Q 009691 149 AGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQ 216 (528)
Q Consensus 149 ~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~ 216 (528)
+|||||++.+++.+... ..|.+|| ++||.|.|+. +. + .++.++++.+.+++...
T Consensus 82 ~GGDGT~l~a~~~~~~~---~~pvlgi-~~G~~gfl~~-~~-~--------~~~~~~~~~i~~g~~~~ 135 (307)
T 1u0t_A 82 LGGDGTFLRAAELARNA---SIPVLGV-NLGRIGFLAE-AE-A--------EAIDAVLEHVVAQDYRV 135 (307)
T ss_dssp EECHHHHHHHHHHHHHH---TCCEEEE-ECSSCCSSCS-EE-G--------GGHHHHHHHHHHTCCEE
T ss_pred EeCCHHHHHHHHHhccC---CCCEEEE-eCCCCccCcc-cC-H--------HHHHHHHHHHHcCCcEE
Confidence 99999999999998752 2344775 8999999995 32 3 36888999998887654
No 7
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=98.98 E-value=6.9e-09 Score=103.96 Aligned_cols=99 Identities=10% Similarity=0.077 Sum_probs=69.3
Q ss_pred eEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 009691 77 PVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 156 (528)
Q Consensus 77 pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~ 156 (528)
++.+|+||+ ..+.++++.+.+.|....+ ++.. .+.+.||++|||||+.
T Consensus 2 ki~ii~n~~---~~~~~~~~~l~~~l~~~g~-~v~~----------------------------~~~D~vv~lGGDGT~l 49 (272)
T 2i2c_A 2 KYMITSKGD---EKSDLLRLNMIAGFGEYDM-EYDD----------------------------VEPEIVISIGGDGTFL 49 (272)
T ss_dssp EEEEEECCS---HHHHHHHHHHHHHHTTSSC-EECS----------------------------SSCSEEEEEESHHHHH
T ss_pred EEEEEECCC---HHHHHHHHHHHHHHHHCCC-EeCC----------------------------CCCCEEEEEcCcHHHH
Confidence 478999963 3566778888888876543 1110 1246799999999999
Q ss_pred HHHHHHhcCCCCCCCC-EEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCCeeeEeEE
Q 009691 157 WLLGVVSDLKLPHSPP-VATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSW 220 (528)
Q Consensus 157 ~Vl~~l~~~~~~~~~p-lgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~~~~iD~w 220 (528)
.+++.+... ...+| +|| |+|| |+|.+.+. + .+++++++.+.+++...-.++
T Consensus 50 ~aa~~~~~~--~~~~PilGI-n~G~-lgfl~~~~-~--------~~~~~~l~~l~~g~~~i~~r~ 101 (272)
T 2i2c_A 50 SAFHQYEER--LDEIAFIGI-HTGH-LGFYADWR-P--------AEADKLVKLLAKGEYQKVSYP 101 (272)
T ss_dssp HHHHHTGGG--TTTCEEEEE-ESSS-CCSSCCBC-G--------GGHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHhhc--CCCCCEEEE-eCCC-CCcCCcCC-H--------HHHHHHHHHHHcCCCEEEEEE
Confidence 999998641 01455 776 9999 66877775 3 368889999999876533333
No 8
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=97.77 E-value=0.00012 Score=76.85 Aligned_cols=158 Identities=13% Similarity=0.132 Sum_probs=87.7
Q ss_pred ccccccccccccCceeccCCc--ccccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccC--cE-EEEeecCchhHHH
Q 009691 46 PKSKILNNYYIPNYILVSGSE--VQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV-IDLGEKAPDKVLH 120 (528)
Q Consensus 46 ~~~~~~~~~~ip~~~~~~~~~--~~~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~--qV-~dL~~~~p~~~l~ 120 (528)
..+..|+.-..|.|+-.|.++ ...|. .+.+.++||.||.. ....+.+..+.+.|... .+ +.+.. ...+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~-~~~k~V~II~n~~~--~~~~~~~~~l~~~L~~~~~gi~V~ve~-~~a~~-- 84 (388)
T 3afo_A 11 KPVNNLRSSSSADFVSPPNSKLQSLIWQ-NPLQNVYITKKPWT--PSTREAMVEFITHLHESYPEVNVIVQP-DVAEE-- 84 (388)
T ss_dssp EEGGGSCCCCCCEEEC----CCEEEECS-SCCCEEEEEECTTC--HHHHHHHHHHHHHHHHHCTTCEEECCH-HHHHH--
T ss_pred eeHhhcCcccCcceEeCcchhheeeEcc-CCCcEEEEEEeCCC--HHHHHHHHHHHHHHHHhCCCeEEEEeC-chhhh--
Confidence 446667777778888888764 22344 45688999999874 45666777777777643 32 21221 11111
Q ss_pred HHHHHHHHh-hh----c----cchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCC
Q 009691 121 QLYVTLEKF-KA----A----GDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWG 191 (528)
Q Consensus 121 ~~~~~l~~l-~~----~----~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg 191 (528)
+...+... .. . ...........+.||++|||||+..++..+... ..+|.||| ++||.+-|+. +..
T Consensus 85 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlVIvlGGDGTlL~aa~~~~~~--~vpPiLGI-N~G~lGFLt~-~~~- 158 (388)
T 3afo_A 85 -ISQDFKSPLENDPNRPHILYTGPEQDIVNRTDLLVTLGGDGTILHGVSMFGNT--QVPPVLAF-ALGTLGFLSP-FDF- 158 (388)
T ss_dssp -HHTTCCSCGGGCTTSCEEEEECCHHHHHHHCSEEEEEESHHHHHHHHHTTTTS--CCCCEEEE-ECSSCCSSCC-EEG-
T ss_pred -hhhhccccccccccccccccccchhhcccCCCEEEEEeCcHHHHHHHHHhccc--CCCeEEEE-ECCCcccCCc-CCh-
Confidence 10000000 00 0 000000112356899999999999999877542 11234665 9999865543 432
Q ss_pred CCCCCChhHHHHHHHHHHHcCCeeeEeEEEEe
Q 009691 192 KKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 223 (528)
Q Consensus 192 ~~~~~~~~~~~~~~l~~I~~a~~~~iD~w~V~ 223 (528)
.++.++|+.+.+++.....+-.+.
T Consensus 159 --------~~~~~al~~il~g~~~~~~r~~L~ 182 (388)
T 3afo_A 159 --------KEHKKVFQEVISSRAKCLHRTRLE 182 (388)
T ss_dssp --------GGHHHHHHHHHTTCCEEEEECCEE
T ss_pred --------HHHHHHHHHHhcCCceEEEeeEEE
Confidence 368889999999977554444443
No 9
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=94.00 E-value=0.092 Score=52.47 Aligned_cols=54 Identities=19% Similarity=0.228 Sum_probs=34.9
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHc
Q 009691 143 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 211 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~ 211 (528)
.+.||+.|||||+-.++..+.. . +||--|..||-+=|+. +.. +++.++|+.+.+
T Consensus 69 ~DlvIvlGGDGT~L~aa~~~~~----~-~PilGIN~G~lGFLt~---~~~-------~~~~~~l~~l~~ 122 (278)
T 1z0s_A 69 FDFIVSVGGDGTILRILQKLKR----C-PPIFGINTGRVGLLTH---ASP-------ENFEVELKKAVE 122 (278)
T ss_dssp SSEEEEEECHHHHHHHHTTCSS----C-CCEEEEECSSSCTTCC---BBT-------TBCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHhCC----C-CcEEEECCCCCccccc---cCH-------HHHHHHHHHHHh
Confidence 5679999999999888765432 3 6766668886444442 221 245666777664
No 10
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=93.43 E-value=1.1 Score=46.47 Aligned_cols=146 Identities=20% Similarity=0.143 Sum_probs=73.1
Q ss_pred eeccCCcccccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHH--HHHHhhhccchh-
Q 009691 60 ILVSGSEVQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYV--TLEKFKAAGDVF- 136 (528)
Q Consensus 60 ~~~~~~~~~~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~--~l~~l~~~~~~~- 136 (528)
+.-|.+....|.. +.+.++||--+.. ......+..+.+.|....+-.+.+..-.+.+. +.. .+.........+
T Consensus 24 ~~~~~~~~l~w~~-~~k~I~iv~K~~~--~~~~~~~~~l~~~L~~~~~~V~ve~~~~~~~~-~~~~~~~~~~~~~~~~~~ 99 (365)
T 3pfn_A 24 IQDPASQRLTWNK-SPKSVLVIKKMRD--ASLLQPFKELCTHLMEENMIVYVEKKVLEDPA-IASDESFGAVKKKFCTFR 99 (365)
T ss_dssp EECTTTCBEEESS-CCCEEEEEECTTC--GGGHHHHHHHHHHHHHTSCEEEEEHHHHHSHH-HHHCSTTHHHHHHCEEEC
T ss_pred ecCccccccccCC-CCCEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEehHHhhhhc-cccccccccccccccccc
Confidence 3344444444544 4577888876654 45556677777777654432122211011000 000 000000000000
Q ss_pred --hhhh-ccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCC
Q 009691 137 --ASEI-EKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAK 213 (528)
Q Consensus 137 --a~~~-~~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~ 213 (528)
..+. +..+.||+.|||||+-.++..+.. ..+||--|-+| .||.=.. .+.+++.++|+.+.++.
T Consensus 100 ~~~~~~~~~~DlvI~lGGDGT~L~aa~~~~~----~~~PvlGiN~G-------~LGFLt~---~~~~~~~~~l~~vl~g~ 165 (365)
T 3pfn_A 100 EDYDDISNQIDFIICLGGDGTLLYASSLFQG----SVPPVMAFHLG-------SLGFLTP---FSFENFQSQVTQVIEGN 165 (365)
T ss_dssp TTTCCCTTTCSEEEEESSTTHHHHHHHHCSS----SCCCEEEEESS-------SCTTTCC---EESTTHHHHHHHHHHSC
T ss_pred cChhhcccCCCEEEEEcChHHHHHHHHHhcc----CCCCEEEEcCC-------CCcccee---ecHHHHHHHHHHHHcCC
Confidence 0011 234579999999999988877654 34564444555 3343221 12246888999999887
Q ss_pred eeeEeEEEEe
Q 009691 214 EMQIDSWHIL 223 (528)
Q Consensus 214 ~~~iD~w~V~ 223 (528)
..--.+-.+.
T Consensus 166 ~~v~~R~~L~ 175 (365)
T 3pfn_A 166 AAVVLRSRLK 175 (365)
T ss_dssp CBEEEECCEE
T ss_pred CeEEEEeeEE
Confidence 6555554444
No 11
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=78.08 E-value=5.7 Score=40.57 Aligned_cols=105 Identities=15% Similarity=0.129 Sum_probs=56.3
Q ss_pred ccCceeccCCc-cc---ccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhh
Q 009691 56 IPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKA 131 (528)
Q Consensus 56 ip~~~~~~~~~-~~---~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~~l~~l~~ 131 (528)
.|+.++..... .. .......++++|+..+.. ..+.+++.+.|....+..+....|..-++.+.+.++.+++
T Consensus 11 ~p~~i~~G~g~~~~l~~~l~~~g~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~v~~~v~~~p~~~~v~~~~~~~~~ 85 (353)
T 3hl0_A 11 APARIVFSAGSSADVAEEIRRLGLSRALVLSTPQQ-----KGDAEALASRLGRLAAGVFSEAAMHTPVEVTKTAVEAYRA 85 (353)
T ss_dssp CCCCEEECTTGGGGHHHHHHHTTCCCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTCBHHHHHHHHHHHHH
T ss_pred CCceEEECcCHHHHHHHHHHHhCCCEEEEEecCch-----hhHHHHHHHHHhhCCcEEecCcCCCCcHHHHHHHHHHHhc
Confidence 67766654432 10 111122366888776542 2356777887876443222221222222323333222211
Q ss_pred ccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 132 AGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 132 ~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
.+.+.||++|| |++.-+...+.-. ..+|+..||-
T Consensus 86 ---------~~~D~IIavGG-Gs~iD~aK~iA~~---~~~p~i~IPT 119 (353)
T 3hl0_A 86 ---------AGADCVVSLGG-GSTTGLGKAIALR---TDAAQIVIPT 119 (353)
T ss_dssp ---------TTCSEEEEEES-HHHHHHHHHHHHH---HCCEEEEEEC
T ss_pred ---------cCCCEEEEeCC-cHHHHHHHHHHhc---cCCCEEEEeC
Confidence 23467899998 9999888876542 4678888885
No 12
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=74.10 E-value=8.5 Score=39.35 Aligned_cols=85 Identities=13% Similarity=0.083 Sum_probs=48.6
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 155 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV 155 (528)
++++|+..+.. ..+.+++.+.|....+..+....|...++.+.+.++.++ + .+.+.||++|| |++
T Consensus 37 ~r~liVtd~~~-----~~~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~~~~~~--------~-~~~D~IIavGG-Gsv 101 (358)
T 3jzd_A 37 KRALVLCTPNQ-----QAEAERIADLLGPLSAGVYAGAVMHVPIESARDATARAR--------E-AGADCAVAVGG-GST 101 (358)
T ss_dssp SCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTCBHHHHHHHHHHHH--------H-HTCSEEEEEES-HHH
T ss_pred CeEEEEeCCcH-----HHHHHHHHHHhccCCEEEecCCcCCCCHHHHHHHHHHhh--------c-cCCCEEEEeCC-cHH
Confidence 56888876542 235677777787644322222222222222333322211 1 23467899998 999
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeC
Q 009691 156 SWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 156 ~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
.-+...+... ..+|+..||-
T Consensus 102 iD~aK~iA~~---~~~p~i~IPT 121 (358)
T 3jzd_A 102 TGLGKAIALE---TGMPIVAIPT 121 (358)
T ss_dssp HHHHHHHHHH---HCCCEEEEEC
T ss_pred HHHHHHHHhc---cCCCEEEEeC
Confidence 9888877542 4678888885
No 13
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=69.57 E-value=17 Score=37.51 Aligned_cols=122 Identities=18% Similarity=0.208 Sum_probs=63.2
Q ss_pred cccccCceeccCCc-c---cccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHH
Q 009691 53 NYYIPNYILVSGSE-V---QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEK 128 (528)
Q Consensus 53 ~~~ip~~~~~~~~~-~---~~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~~l~~ 128 (528)
.|..|..++..... . .... . .++++|+..+.+- ....+.+.+.+.|...+++.+....|...++.+.+.++.
T Consensus 26 ~~~~p~~i~~G~g~l~~l~~~l~-~-g~r~liVtd~~~~--~~~g~~~~v~~~L~g~~~~~f~~v~~~p~~~~v~~~~~~ 101 (408)
T 1oj7_A 26 NLHTPTRILFGKGAIAGLREQIP-H-DARVLITYGGGSV--KKTGVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKL 101 (408)
T ss_dssp EEEEEEEEEESTTGGGGHHHHSC-T-TCEEEEEECSSHH--HHHSHHHHHHHHTTTSEEEEECCCCSSCBHHHHHHHHHH
T ss_pred eecCCCeEEECCCHHHHHHHHHh-c-CCEEEEEECCchh--hhccHHHHHHHHhCCCEEEEeCCcCCCcCHHHHHHHHHH
Confidence 35557765554322 1 1112 2 2688888765431 111256777777763344333332223223333333322
Q ss_pred hhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC------------------CCCCCCEEEeeC--CCCcchhhcc
Q 009691 129 FKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK------------------LPHSPPVATVPL--GTGNNIPFSF 188 (528)
Q Consensus 129 l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~------------------~~~~~plgiIPl--GTGNDlAR~L 188 (528)
+++ .+.+.||++|| |++.-+...+.-.- ....+|+..||- |||-.....-
T Consensus 102 ~~~---------~~~D~IIavGG-GsviD~AK~iA~~~~~~~~~~~~d~~~~~~~~~~~~~p~i~IPTTagtgSevt~~a 171 (408)
T 1oj7_A 102 VRE---------QKVTFLLAVGG-GSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGA 171 (408)
T ss_dssp HHH---------HTCCEEEEEES-HHHHHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGSSEE
T ss_pred HHH---------cCCCEEEEeCC-chHHHHHHHHHHHHhCCCCCCHHHHhccccCcCCCCCCEEEEeCCCchhHHhCCCE
Confidence 211 23457888888 88888877665421 014578999996 6765554443
No 14
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=65.59 E-value=11 Score=38.55 Aligned_cols=92 Identities=16% Similarity=0.217 Sum_probs=53.3
Q ss_pred CCeEEEEEcCcCCCCChhhHHHHHHHHhccC-cE--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009691 75 SCPVLVFINSKSGGQLGGKLLLTYRSLLNEN-QV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 151 (528)
Q Consensus 75 ~~pllVivNPkSGg~~g~~ll~~~~~~L~~~-qV--~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GG 151 (528)
.++++|+.++.... ...+.+.+.|... ++ +.+....+.+.++.+.+.++.+.+.+ ..+...||++||
T Consensus 34 ~~k~liVtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~ge~~k~~~~v~~~~~~~~~~~------~~r~d~iIalGG 103 (368)
T 2gru_A 34 FDQYIMISDSGVPD----SIVHYAAEYFGKLAPVHILRFQGGEEYKTLSTVTNLQERAIALG------ANRRTAIVAVGG 103 (368)
T ss_dssp CSEEEEEEETTSCH----HHHHHHHHHHTTTSCEEEEEECCSGGGCSHHHHHHHHHHHHHTT------CCTTEEEEEEES
T ss_pred CCEEEEEECCcHHH----HHHHHHHHHHHhccceeEEEeCCCCCCCCHHHHHHHHHHHHhcC------CCCCcEEEEECC
Confidence 46899999876642 2567777777543 33 33333333333443333333222211 122456888887
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 152 DGTASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 152 DGTV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
|++.-+...+... ....+|+..||-
T Consensus 104 -Gsv~D~ak~~Aa~-~~rgip~i~IPT 128 (368)
T 2gru_A 104 -GLTGNVAGVAAGM-MFRGIALIHVPT 128 (368)
T ss_dssp -HHHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred -hHHHHHHHHHHHH-hcCCCCEEEECC
Confidence 8999988877632 125688999997
No 15
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=65.58 E-value=9.9 Score=39.30 Aligned_cols=109 Identities=13% Similarity=0.029 Sum_probs=57.6
Q ss_pred ccccccccCceeccCCcc-c---ccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhcc-Cc-EEEEeecCchhHHHHHH
Q 009691 50 ILNNYYIPNYILVSGSEV-Q---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNE-NQ-VIDLGEKAPDKVLHQLY 123 (528)
Q Consensus 50 ~~~~~~ip~~~~~~~~~~-~---~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~-~q-V~dL~~~~p~~~l~~~~ 123 (528)
+.+.|..|..++.-.... . ...... ++++||..+..- ..+.+.+.+.|.. .. +|+.....|. .+.+.
T Consensus 24 m~~~f~~p~~i~~G~g~l~~l~~~l~~~g-~r~liVtd~~~~----~~~~~~v~~~L~~g~~~~~~~~~~~p~--~~~v~ 96 (387)
T 3uhj_A 24 MARAFGGPNKYIQRAGEIDKLAAYLAPLG-KRALVLIDRVLF----DALSERIGKSCGDSLDIRFERFGGECC--TSEIE 96 (387)
T ss_dssp CEEEEECCSEEEECTTTTTTTHHHHGGGC-SEEEEEECTTTH----HHHHHHC------CCEEEEEECCSSCS--HHHHH
T ss_pred hhhHhcCCCeEEEcCCHHHHHHHHHHHcC-CEEEEEECchHH----HHHHHHHHHHHHcCCCeEEEEcCCCCC--HHHHH
Confidence 357788888877655321 0 111122 778888876553 2366777777765 12 2433322222 12222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 124 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 124 ~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
+.++.++ + .+.+.||++|| |++.-+...+.-+ ..+|+..||-
T Consensus 97 ~~~~~~~--------~-~~~d~IIavGG-Gs~~D~AK~iA~~---~~~p~i~IPT 138 (387)
T 3uhj_A 97 RVRKVAI--------E-HGSDILVGVGG-GKTADTAKIVAID---TGARIVIAPT 138 (387)
T ss_dssp HHHHHHH--------H-HTCSEEEEESS-HHHHHHHHHHHHH---TTCEEEECCS
T ss_pred HHHHHHh--------h-cCCCEEEEeCC-cHHHHHHHHHHHh---cCCCEEEecC
Confidence 2222211 1 23467888888 9999888877643 4688999996
No 16
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=64.18 E-value=14 Score=38.31 Aligned_cols=93 Identities=17% Similarity=0.229 Sum_probs=51.8
Q ss_pred CCCeEEEEEcCcCCCCChhhHHHHHHHHhccC--cE--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEE
Q 009691 74 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVA 149 (528)
Q Consensus 74 ~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~--qV--~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~ 149 (528)
..++++|+.++... ..+.+.+.+.|... ++ +.+....+...++.+.+.++.+.+. ...+...||++
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~------~~~R~d~IIAv 130 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEH------NYSRDVVVIAL 130 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHHHHHHT------TCCTTCEEEEE
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHcCCeEEEEEECCCcCCchHHHHHHHHHHHHhc------CCCcCcEEEEE
Confidence 35789999987654 23667777777543 22 3333322322233333333322211 11223568888
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 150 GGDGTASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 150 GGDGTV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
|| |++.-+...+... ....+|+..||-
T Consensus 131 GG-Gsv~D~ak~~Aa~-~~rgip~I~IPT 157 (390)
T 3okf_A 131 GG-GVIGDLVGFAAAC-YQRGVDFIQIPT 157 (390)
T ss_dssp ES-HHHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred CC-cHHhhHHHHHHHH-hcCCCCEEEeCC
Confidence 87 8998888876421 125688888886
No 17
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=63.48 E-value=66 Score=32.59 Aligned_cols=99 Identities=21% Similarity=0.271 Sum_probs=52.6
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccC--cEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 153 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~--qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDG 153 (528)
++++|+..+.+-... .+++.+.+.|... .++.+....+...++.+.+.++.+++ .+...||++|| |
T Consensus 41 ~~~liVtd~~~~~~~--g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~---------~~~d~IIavGG-G 108 (371)
T 1o2d_A 41 KRALVVTGKSSSKKN--GSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRN---------DSFDFVVGLGG-G 108 (371)
T ss_dssp SEEEEEEESSGGGTS--SHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTT---------SCCSEEEEEES-H
T ss_pred CEEEEEECchHHhhc--cHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHHHh---------cCCCEEEEeCC-h
Confidence 789999887553322 2455666666432 23222221222222323333322211 13456888888 8
Q ss_pred HHHHHHHHHhcCCCC---------------CCCCEEEeeC--CCCcchhh
Q 009691 154 TASWLLGVVSDLKLP---------------HSPPVATVPL--GTGNNIPF 186 (528)
Q Consensus 154 TV~~Vl~~l~~~~~~---------------~~~plgiIPl--GTGNDlAR 186 (528)
++.-+...+...-.. ..+|+..||- |||-....
T Consensus 109 sv~D~AK~iA~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgse~t~ 158 (371)
T 1o2d_A 109 SPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVTP 158 (371)
T ss_dssp HHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGGCC
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHhcccCCCCCCeEEEEeCCCchhhhhcC
Confidence 888887766542111 5689999994 56655444
No 18
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=57.52 E-value=37 Score=34.73 Aligned_cols=120 Identities=13% Similarity=0.156 Sum_probs=61.9
Q ss_pred cccccCceeccCCc----ccccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCc--EEEEeecCchhHHHHHHHHH
Q 009691 53 NYYIPNYILVSGSE----VQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTL 126 (528)
Q Consensus 53 ~~~ip~~~~~~~~~----~~~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~q--V~dL~~~~p~~~l~~~~~~l 126 (528)
.|..|+.++..... .........++++|+..+.- ....+.+.+.+.|.... +..+....+...++.+.+.+
T Consensus 5 ~f~~p~~i~~G~g~~~~l~~~~~~~g~~~~liVtd~~~---~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~ 81 (383)
T 3ox4_A 5 TFYIPFVNEMGEGSLEKAIKDLNGSGFKNALIVSDAFM---NKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGL 81 (383)
T ss_dssp EEECCSEEEESTTHHHHHHHTTTTSCCCEEEEEEEHHH---HHTTHHHHHHHHHHTTTCEEEEEEEECSSCBHHHHHHHH
T ss_pred eecCCCeEEECCCHHHHHHHHHHHcCCCEEEEEECCch---hhCchHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 46678876665432 11122223467888876521 11225677777776543 22222212222233233333
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEeeC--CCCcchh
Q 009691 127 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNIP 185 (528)
Q Consensus 127 ~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~---------------~~~~~plgiIPl--GTGNDlA 185 (528)
+.+++ .+.+.||++|| |++.-+...+.-.- ....+|+..||- |||-...
T Consensus 82 ~~~~~---------~~~D~IIavGG-Gsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSe~t 147 (383)
T 3ox4_A 82 KILKD---------NNSDFVISLGG-GSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTAGTASEMT 147 (383)
T ss_dssp HHHHH---------HTCSEEEEEES-HHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSSSCCTTTC
T ss_pred HHHHh---------cCcCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCCCchhhcC
Confidence 22211 23467999999 88888777653210 023688999996 5554443
No 19
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=54.81 E-value=8.4 Score=39.79 Aligned_cols=40 Identities=23% Similarity=0.207 Sum_probs=30.4
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcchh
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIP 185 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPl--GTGNDlA 185 (528)
..||++|| |++.-+...+... ....+|+..||- |||.|-+
T Consensus 107 d~iIalGG-Gsv~D~ak~~Aa~-~~rgip~i~IPTTlla~~das 148 (393)
T 1sg6_A 107 TVVIALGG-GVIGDLTGFVAST-YMRGVRYVQVPTTLLAMVDSS 148 (393)
T ss_dssp CEEEEEES-HHHHHHHHHHHHH-GGGCCEEEEEECSHHHHHTTT
T ss_pred CEEEEECC-cHHHHHHHHHHHH-hcCCCCEEEECCchhhhhhcC
Confidence 56888887 8888888876531 124689999998 8999984
No 20
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=54.66 E-value=18 Score=37.14 Aligned_cols=90 Identities=18% Similarity=0.189 Sum_probs=49.9
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCc--E--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 151 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~q--V--~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GG 151 (528)
++++|+.++.... +...+.+.|.... + +.+....+...++.+.+.++.+.+. ...+...||++||
T Consensus 44 ~rvlIVtd~~v~~-----~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~------~~~r~d~IIavGG 112 (368)
T 3qbe_A 44 HKVAVVHQPGLAE-----TAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRI------GIGRKDALVSLGG 112 (368)
T ss_dssp SEEEEEECGGGHH-----HHHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHHHHHHHHH------TCCTTCEEEEEES
T ss_pred CEEEEEECccHHH-----HHHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHHHHHHHHc------CCCCCcEEEEECC
Confidence 7899998876532 3566667675432 2 3333333333333333333222211 0123456888888
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 152 DGTASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 152 DGTV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
|++.-+...+... ....+|+..||-
T Consensus 113 -Gsv~D~ak~~Aa~-~~rgip~i~IPT 137 (368)
T 3qbe_A 113 -GAATDVAGFAAAT-WLRGVSIVHLPT 137 (368)
T ss_dssp -HHHHHHHHHHHHH-GGGCCEEEEEEC
T ss_pred -hHHHHHHHHHHHH-hccCCcEEEECC
Confidence 8888888876531 124688888895
No 21
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=52.66 E-value=29 Score=35.03 Aligned_cols=37 Identities=27% Similarity=0.388 Sum_probs=29.1
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchh
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 185 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlA 185 (528)
..++++|||||..-+. .|.+ ..+++--||-==-||++
T Consensus 96 d~LvvIGGdgS~~~a~-~L~~----~~i~vvgiPkTIDNDl~ 132 (320)
T 1pfk_A 96 DALVVIGGDGSYMGAM-RLTE----MGFPCIGLPGTIDNDIK 132 (320)
T ss_dssp CEEEEEECHHHHHHHH-HHHH----TTCCEEEEEBCTTCCCT
T ss_pred CEEEEECCCchHHHHH-HHHh----hCCCEEEEeccccCCCC
Confidence 3699999999987554 4444 35788889999999997
No 22
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=51.51 E-value=25 Score=35.87 Aligned_cols=83 Identities=13% Similarity=0.086 Sum_probs=47.4
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcEEEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 155 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV 155 (528)
++++|+..+.. ..+.+++.+.|....+|+-.+..| -++.+.+.++.+++ .+.+.||++|| |++
T Consensus 38 ~rvliVtd~~~-----~~~~~~v~~~L~~~~~f~~v~~~p--~~~~v~~~~~~~~~---------~~~D~IIavGG-Gs~ 100 (364)
T 3iv7_A 38 AKVMVIAGERE-----MSIAHKVASEIEVAIWHDEVVMHV--PIEVAERARAVATD---------NEIDLLVCVGG-GST 100 (364)
T ss_dssp SSEEEECCGGG-----HHHHHHHTTTSCCSEEECCCCTTC--BHHHHHHHHHHHHH---------TTCCEEEEEES-HHH
T ss_pred CEEEEEECCCH-----HHHHHHHHHHcCCCEEEcceecCC--CHHHHHHHHHHHHh---------cCCCEEEEeCC-cHH
Confidence 56777766532 235667777776433454222222 22223333222211 23457899998 999
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeC
Q 009691 156 SWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 156 ~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
.-+...+.-. ..+|+..||-
T Consensus 101 iD~aK~iA~~---~~~P~i~IPT 120 (364)
T 3iv7_A 101 IGLAKAIAMT---TALPIVAIPT 120 (364)
T ss_dssp HHHHHHHHHH---HCCCEEEEEC
T ss_pred HHHHHHHHhc---cCCCEEEEcC
Confidence 8888876542 4678888885
No 23
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=48.71 E-value=12 Score=37.89 Aligned_cols=92 Identities=20% Similarity=0.210 Sum_probs=51.5
Q ss_pred CCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009691 75 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 152 (528)
Q Consensus 75 ~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV--~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGD 152 (528)
.++++|+.++.... .+.+.+.+.|....+ +.+....+.+.++.+.+.++.+++. ...+...||++||
T Consensus 26 ~~~~livtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~e~~k~~~~v~~~~~~~~~~------~~~r~d~iIavGG- 94 (343)
T 3clh_A 26 KQKALIISDSIVAG----LHLPYLLERLKALEVRVCVIESGEKYKNFHSLERILNNAFEM------QLNRHSLMIALGG- 94 (343)
T ss_dssp SSCEEEEEEHHHHT----TTHHHHHTTEECSCEEEEEECSSGGGCSHHHHHHHHHHHHHT------TCCTTCEEEEEES-
T ss_pred CCEEEEEECCcHHH----HHHHHHHHHHHhCCcEEEEeCCCCCCCCHHHHHHHHHHHHhc------CCCCCceEEEECC-
Confidence 36788888865533 246677777765443 3333333332333333333322211 1122356888887
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 153 GTASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 153 GTV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
|++.-+...+... ....+|+..||-
T Consensus 95 Gsv~D~ak~~A~~-~~rgip~i~IPT 119 (343)
T 3clh_A 95 GVISDMVGFASSI-YFRGIDFINIPT 119 (343)
T ss_dssp HHHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred hHHHHHHHHHHHH-hccCCCEEEeCC
Confidence 8888888876532 125788999994
No 24
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=47.21 E-value=31 Score=34.83 Aligned_cols=90 Identities=19% Similarity=0.241 Sum_probs=50.2
Q ss_pred CCeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 009691 75 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 153 (528)
Q Consensus 75 ~~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDG 153 (528)
.++++|+.++.. .. +.+.+.+.|. ..+ +.+....+...++.+.+.++.+++. ...+...||++|| |
T Consensus 28 ~~kvliVtd~~v----~~-~~~~v~~~L~-~~~~~~~~~ge~~~~~~~v~~~~~~~~~~------~~~r~d~IIavGG-G 94 (348)
T 1ujn_A 28 AGPAALLFDRRV----EG-FAQEVAKALG-VRHLLGLPGGEAAKSLEVYGKVLSWLAEK------GLPRNATLLVVGG-G 94 (348)
T ss_dssp SSCEEEEEEGGG----HH-HHHHHHHHHT-CCCEEEECCSGGGSSHHHHHHHHHHHHHH------TCCTTCEEEEEES-H
T ss_pred CCEEEEEECCcH----HH-HHHHHHHHhc-cCeEEEECCCCCCCCHHHHHHHHHHHHHc------CCCCCCEEEEECC-c
Confidence 467888888644 23 6777777775 333 3333322333333333333222211 0122356888887 8
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 154 TASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 154 TV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
++.-+...+... ....+|+..||-
T Consensus 95 sv~D~ak~~A~~-~~rgip~i~IPT 118 (348)
T 1ujn_A 95 TLTDLGGFVAAT-YLRGVAYLAFPT 118 (348)
T ss_dssp HHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred HHHHHHHHHHHH-hccCCCEEEecC
Confidence 888888877632 125688999995
No 25
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=46.82 E-value=1.3e+02 Score=27.59 Aligned_cols=92 Identities=12% Similarity=0.158 Sum_probs=50.1
Q ss_pred CCCCCCe-EEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEE
Q 009691 71 SLIPSCP-VLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIV 148 (528)
Q Consensus 71 ~~~~~~p-llVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV 148 (528)
+.++.+| +.||. |+..-..+.++....|....+ |++...+.+...+++..-.+... +..-.+.|.+
T Consensus 7 ~~~~m~~~V~Iim----GS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~--------~~g~~ViIa~ 74 (174)
T 3kuu_A 7 SAYAAGVKIAIVM----GSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAE--------ANGLHVIIAG 74 (174)
T ss_dssp CSSCCCCCEEEEE----SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTT--------TTTCSEEEEE
T ss_pred ccccCCCcEEEEE----CcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHH--------hCCCcEEEEE
Confidence 3444454 55554 444445566677777766655 77654333322222222211111 0111356899
Q ss_pred EcCchHHHHHHHHHhcCCCCCCCCEEEeeCCC
Q 009691 149 AGGDGTASWLLGVVSDLKLPHSPPVATVPLGT 180 (528)
Q Consensus 149 ~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGT 180 (528)
+||.+-+--++.++.. .|.||+ |.-+
T Consensus 75 AG~aa~LpgvvA~~t~-----~PVIgV-P~~~ 100 (174)
T 3kuu_A 75 NGGAAHLPGMLAAKTL-----VPVLGV-PVQS 100 (174)
T ss_dssp EESSCCHHHHHHHTCS-----SCEEEE-EECC
T ss_pred CChhhhhHHHHHhccC-----CCEEEe-eCCC
Confidence 9999999999988753 355665 5543
No 26
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=45.32 E-value=30 Score=34.83 Aligned_cols=37 Identities=30% Similarity=0.421 Sum_probs=28.8
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchh
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 185 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlA 185 (528)
..++++|||||..-+. .|.+ ..+++--||-==-||++
T Consensus 95 d~LvvIGGdgS~~~a~-~L~~----~~i~vvgiPkTIDNDl~ 131 (319)
T 1zxx_A 95 DAVVVIGGDGSYHGAL-QLTR----HGFNSIGLPGTIDNDIP 131 (319)
T ss_dssp CEEEEEECHHHHHHHH-HHHH----TTCCEEEEEEETTCCCT
T ss_pred CEEEEECCchHHHHHH-HHHH----hCCCEEEEeecccCCCC
Confidence 3699999999986544 4444 25788889999999997
No 27
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=44.11 E-value=11 Score=34.38 Aligned_cols=61 Identities=18% Similarity=0.138 Sum_probs=34.4
Q ss_pred EEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHc
Q 009691 147 IVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 211 (528)
Q Consensus 147 IV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~ 211 (528)
..+|||-|- +++.-+...-+..+|-+.+|=+|| ||+++..+-.. ......++.++++.+..
T Consensus 56 ~Gi~G~tt~-~~l~r~~~~v~~~~Pd~vvi~~G~-ND~~~~~~~~~--~~~~~~~l~~ii~~~~~ 116 (209)
T 4hf7_A 56 RGISGQTSY-QFLLRFREDVINLSPALVVINAGT-NDVAENTGAYN--EDYTFGNIASMAELAKA 116 (209)
T ss_dssp EECTTCCHH-HHHHHHHHHTGGGCCSEEEECCCH-HHHTTSSSSCC--HHHHHHHHHHHHHHHHH
T ss_pred eccCcccHH-HHHHHHHHHHHhcCCCEEEEEeCC-CcCcccccccc--HHHHHHHHHHhhHHHhc
Confidence 456898664 444444331123568899999998 99987654321 00011335556665544
No 28
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=42.78 E-value=1e+02 Score=28.23 Aligned_cols=89 Identities=12% Similarity=0.171 Sum_probs=48.6
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 154 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGT 154 (528)
+|...|+= |+..-..+.+.....|....+ |++...+.....+++.+-.+... +..-.+.|.++||.+-
T Consensus 11 ~~~V~Iim---GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~--------~~g~~ViIa~AG~aa~ 79 (170)
T 1xmp_A 11 KSLVGVIM---GSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETAR--------ERGLKVIIAGAGGAAH 79 (170)
T ss_dssp CCSEEEEE---SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTT--------TTTCCEEEEEEESSCC
T ss_pred CCcEEEEE---CcHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHH--------hCCCcEEEEECCchhh
Confidence 45444442 554555667777777776666 77655333222222222111100 0011356889999999
Q ss_pred HHHHHHHHhcCCCCCCCCEEEeeCCCC
Q 009691 155 ASWLLGVVSDLKLPHSPPVATVPLGTG 181 (528)
Q Consensus 155 V~~Vl~~l~~~~~~~~~plgiIPlGTG 181 (528)
+--|+.++.. .|.||+ |.-++
T Consensus 80 LpgvvA~~t~-----~PVIgV-P~~~~ 100 (170)
T 1xmp_A 80 LPGMVAAKTN-----LPVIGV-PVQSK 100 (170)
T ss_dssp HHHHHHTTCC-----SCEEEE-EECCT
T ss_pred hHHHHHhccC-----CCEEEe-eCCCC
Confidence 9999987643 355555 66554
No 29
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=42.72 E-value=1.6e+02 Score=27.17 Aligned_cols=89 Identities=13% Similarity=0.228 Sum_probs=49.4
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 154 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGT 154 (528)
-|+..|+= |+..-..+.+.....|....+ |++...+.....+++..-.+... +..-.+.|.++||.+-
T Consensus 13 ~~~V~Iim---GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~--------~~g~~ViIa~AG~aa~ 81 (183)
T 1o4v_A 13 VPRVGIIM---GSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAE--------ERGIEVIIAGAGGAAH 81 (183)
T ss_dssp -CEEEEEE---SCGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTT--------TTTCCEEEEEEESSCC
T ss_pred CCeEEEEe---ccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHH--------hCCCcEEEEecCcccc
Confidence 34444443 555555667777777776666 77654333222222222111100 0011356889999999
Q ss_pred HHHHHHHHhcCCCCCCCCEEEeeCCCC
Q 009691 155 ASWLLGVVSDLKLPHSPPVATVPLGTG 181 (528)
Q Consensus 155 V~~Vl~~l~~~~~~~~~plgiIPlGTG 181 (528)
+--|+.++.. .|.||+ |.-++
T Consensus 82 LpgvvA~~t~-----~PVIgV-P~~~~ 102 (183)
T 1o4v_A 82 LPGMVASITH-----LPVIGV-PVKTS 102 (183)
T ss_dssp HHHHHHHHCS-----SCEEEE-EECCT
T ss_pred cHHHHHhccC-----CCEEEe-eCCCC
Confidence 9999998853 344555 76665
No 30
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=42.56 E-value=1.9e+02 Score=26.32 Aligned_cols=81 Identities=11% Similarity=0.185 Sum_probs=45.9
Q ss_pred CCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC
Q 009691 87 GGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL 165 (528)
Q Consensus 87 Gg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~ 165 (528)
|+..-..+.+.....|....+ |++...+.....+++...++.+.++ .-.+.|.++||.+-+--++.++..
T Consensus 13 gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~--------g~~ViIa~AG~aa~LpgvvA~~t~- 83 (166)
T 3oow_A 13 GSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKER--------GLKVIIAGAGGAAHLPGMVAAKTT- 83 (166)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTT--------TCCEEEEEECSSCCHHHHHHHTCS-
T ss_pred CcHHhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhC--------CCcEEEEECCcchhhHHHHHhccC-
Confidence 444445667777777776665 7765433332222232222211110 113568899999999999988753
Q ss_pred CCCCCCCEEEeeCCCC
Q 009691 166 KLPHSPPVATVPLGTG 181 (528)
Q Consensus 166 ~~~~~~plgiIPlGTG 181 (528)
.|.||+ |.-++
T Consensus 84 ----~PVIgV-P~~~~ 94 (166)
T 3oow_A 84 ----LPVLGV-PVKSS 94 (166)
T ss_dssp ----SCEEEE-ECCCT
T ss_pred ----CCEEEe-ecCcC
Confidence 344554 77665
No 31
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=40.46 E-value=2e+02 Score=26.30 Aligned_cols=86 Identities=17% Similarity=0.230 Sum_probs=48.3
Q ss_pred EEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 009691 78 VLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 156 (528)
Q Consensus 78 llVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~ 156 (528)
+.||. |+..-..+.+.....|....| |++...+.+...+++..-.+...+ ..-.+.|.++||.|-+-
T Consensus 15 V~Iim----GS~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~--------~g~~ViIa~AG~aahLp 82 (173)
T 4grd_A 15 VGVLM----GSSSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARE--------RGLRAIIAGAGGAAHLP 82 (173)
T ss_dssp EEEEE----SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTT--------TTCSEEEEEEESSCCHH
T ss_pred EEEEe----CcHhHHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHh--------cCCeEEEEeccccccch
Confidence 55555 444445566666777766666 776553333222222222111110 01134688899999999
Q ss_pred HHHHHHhcCCCCCCCCEEEeeCCCC
Q 009691 157 WLLGVVSDLKLPHSPPVATVPLGTG 181 (528)
Q Consensus 157 ~Vl~~l~~~~~~~~~plgiIPlGTG 181 (528)
-|+.++.. .|.||+ |.-++
T Consensus 83 gvvA~~t~-----~PVIgV-Pv~~~ 101 (173)
T 4grd_A 83 GMLAAKTT-----VPVLGV-PVASK 101 (173)
T ss_dssp HHHHHHCC-----SCEEEE-EECCT
T ss_pred hhheecCC-----CCEEEE-EcCCC
Confidence 99998753 455665 76544
No 32
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=40.35 E-value=1.2e+02 Score=27.53 Aligned_cols=86 Identities=13% Similarity=0.189 Sum_probs=47.5
Q ss_pred EEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 009691 78 VLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 156 (528)
Q Consensus 78 llVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~ 156 (528)
+.||. |+..-..+.+.....|....+ |++...+.+...+++..-.+...+ ..-...|.++||.+-+-
T Consensus 6 V~Iim----gs~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~--------~g~~ViIa~AG~aa~Lp 73 (163)
T 3ors_A 6 VAVIM----GSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARE--------RGINIIIAGAGGAAHLP 73 (163)
T ss_dssp EEEEE----SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTT--------TTCCEEEEEEESSCCHH
T ss_pred EEEEE----CcHHHHHHHHHHHHHHHHcCCCEEEEEECCcCCHHHHHHHHHHHHh--------CCCcEEEEECCchhhhH
Confidence 45554 444444566666666766555 776543333222222221111110 01135689999999999
Q ss_pred HHHHHHhcCCCCCCCCEEEeeCCCC
Q 009691 157 WLLGVVSDLKLPHSPPVATVPLGTG 181 (528)
Q Consensus 157 ~Vl~~l~~~~~~~~~plgiIPlGTG 181 (528)
-++.++.. .|.||+ |.-++
T Consensus 74 gvvA~~t~-----~PVIgV-P~~~~ 92 (163)
T 3ors_A 74 GMVASLTT-----LPVIGV-PIETK 92 (163)
T ss_dssp HHHHHHCS-----SCEEEE-EECCT
T ss_pred HHHHhccC-----CCEEEe-eCCCC
Confidence 99998753 345555 66565
No 33
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=39.95 E-value=1.6e+02 Score=29.78 Aligned_cols=124 Identities=17% Similarity=0.191 Sum_probs=60.0
Q ss_pred cccccCceeccCCc-cc---ccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccC--cEEEEeecCchhHHHHHHHHH
Q 009691 53 NYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTL 126 (528)
Q Consensus 53 ~~~ip~~~~~~~~~-~~---~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~--qV~dL~~~~p~~~l~~~~~~l 126 (528)
.|.+|..++.-... .. .......++++|+..+..-... ..+.+.+.+.|... .++.+....+..-++.+.+.+
T Consensus 7 ~~~~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~~~~-~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~ 85 (387)
T 3bfj_A 7 DYLVPNVNFFGPNAISVVGERCQLLGGKKALLVTDKGLRAIK-DGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGL 85 (387)
T ss_dssp EEECCSEEEESTTGGGGHHHHHHHTTCSEEEEECCTTTC--C-CSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHH
T ss_pred eeeCCCeEEECCCHHHHHHHHHHHcCCCEEEEEECcchhhcc-chHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 35667766554321 10 1111123688888876554320 01355555555432 232233222222233233333
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC--------------C-CCCCCCEEEeeC--CCCcchhhc
Q 009691 127 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL--------------K-LPHSPPVATVPL--GTGNNIPFS 187 (528)
Q Consensus 127 ~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~--------------~-~~~~~plgiIPl--GTGNDlAR~ 187 (528)
+.+++ .+.+.||++|| |++.-+...+.-. + ....+|+..||- |||--....
T Consensus 86 ~~~~~---------~~~d~IIavGG-Gsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSevt~~ 153 (387)
T 3bfj_A 86 AVFRR---------EQCDIIVTVGG-GSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEVTRH 153 (387)
T ss_dssp HHHHH---------TTCCEEEEEES-HHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECSTTCCGGGCSE
T ss_pred HHHHh---------cCCCEEEEeCC-cchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCccccccCc
Confidence 22221 13456888888 8888877765431 0 014678999995 665444433
No 34
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=38.81 E-value=45 Score=33.55 Aligned_cols=37 Identities=35% Similarity=0.524 Sum_probs=29.1
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeCCCCcchh
Q 009691 144 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 185 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPlGTGNDlA 185 (528)
..++++|||||..-+ ..|.+ ..+++--||-==-||++
T Consensus 95 d~L~~IGGdgS~~~a-~~l~~----~~i~vigiPkTIDNDl~ 131 (319)
T 4a3s_A 95 EGLVVIGGDGSYMGA-KKLTE----HGFPCVGVPGTIDNDIP 131 (319)
T ss_dssp CEEEEEECTTHHHHH-HHHHH----TTCCEEEEEEETTCCCT
T ss_pred CEEEEeCCcHHHHHH-HHHhc----cCCcEEEeeccccCCCC
Confidence 369999999998754 44555 35778888999999997
No 35
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=37.15 E-value=26 Score=35.39 Aligned_cols=90 Identities=19% Similarity=0.267 Sum_probs=46.0
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccCc-E--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ-V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 152 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~q-V--~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGD 152 (528)
++++|+.++... ..+.+.+.+.| ... + +.+....+...++.+.+.++.+.+.+ ..+...||++||
T Consensus 32 ~~~liVtd~~~~----~~~~~~v~~~L-~~g~~~~~~~~~~e~~p~~~~v~~~~~~~~~~~------~~r~d~iIavGG- 99 (354)
T 1xah_A 32 DQSFLLIDEYVN----QYFANKFDDIL-SYENVHKVIIPAGEKTKTFEQYQETLEYILSHH------VTRNTAIIAVGG- 99 (354)
T ss_dssp SCEEEEEEHHHH----HHHHHHHC-------CEEEEEECSGGGGCSHHHHHHHHHHHHTTC------CCTTCEEEEEES-
T ss_pred CeEEEEECCcHH----HHHHHHHHHHH-hcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcC------CCCCceEEEECC-
Confidence 678888875432 22566666666 332 3 23333233333333333333222110 112256888887
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 153 GTASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 153 GTV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
|++.-+...+... ....+|+..||-
T Consensus 100 Gsv~D~ak~vA~~-~~rgip~i~IPT 124 (354)
T 1xah_A 100 GATGDFAGFVAAT-LLRGVHFIQVPT 124 (354)
T ss_dssp HHHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred hHHHHHHHHHHHH-hccCCCEEEECC
Confidence 8888888877632 135788999996
No 36
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=36.43 E-value=1.5e+02 Score=27.28 Aligned_cols=88 Identities=13% Similarity=0.182 Sum_probs=48.7
Q ss_pred eEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 009691 77 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 155 (528)
Q Consensus 77 pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV 155 (528)
.+.||. |+..-..+.+.....|....+ |++...+.+...+++..-++... +..-.+.|.++||.+-+
T Consensus 9 ~V~Iim----gS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~--------~~g~~ViIa~AG~aa~L 76 (174)
T 3lp6_A 9 RVGVIM----GSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAA--------ARGLEVIIAGAGGAAHL 76 (174)
T ss_dssp SEEEEE----SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHH--------HHTCCEEEEEEESSCCH
T ss_pred eEEEEE----CcHHhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHH--------hCCCCEEEEecCchhhh
Confidence 356664 444444566666666766555 77654332222222222111111 11123579999999999
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeCCCCc
Q 009691 156 SWLLGVVSDLKLPHSPPVATVPLGTGN 182 (528)
Q Consensus 156 ~~Vl~~l~~~~~~~~~plgiIPlGTGN 182 (528)
--|+.++.. .|.||+ |.-+++
T Consensus 77 pgvvA~~t~-----~PVIgV-P~~~~~ 97 (174)
T 3lp6_A 77 PGMVAAATP-----LPVIGV-PVPLGR 97 (174)
T ss_dssp HHHHHHHCS-----SCEEEE-EECCSS
T ss_pred HHHHHhccC-----CCEEEe-eCCCCC
Confidence 999998753 345555 766653
No 37
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=36.28 E-value=25 Score=37.55 Aligned_cols=40 Identities=28% Similarity=0.261 Sum_probs=28.9
Q ss_pred cEEEEEcCchHHHHHH---HHHhcCCCCCCCCEEEeeCCCCcchh
Q 009691 144 LRLIVAGGDGTASWLL---GVVSDLKLPHSPPVATVPLGTGNNIP 185 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl---~~l~~~~~~~~~plgiIPlGTGNDlA 185 (528)
..++++|||||..-+. +.+.+. ...+++--||-==-||++
T Consensus 191 d~LvvIGGdgS~~~A~~L~e~~~~~--g~~i~vVGIPkTIDNDl~ 233 (487)
T 2hig_A 191 NILFTVGGDGTQRGALVISQEAKRR--GVDISVFGVPKTIDNDLS 233 (487)
T ss_dssp SEEEEEECHHHHHHHHHHHHHHHHH--TCCCEEEEEECCTTSSCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHHHh--CCCceEEeccccccCCCC
Confidence 3699999999987433 233232 235788889999999996
No 38
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=35.67 E-value=66 Score=32.47 Aligned_cols=112 Identities=13% Similarity=0.030 Sum_probs=59.3
Q ss_pred ccccccCceeccCCc-cc---ccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccCc--E-EEEeecCc-hhHHHHHH
Q 009691 52 NNYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V-IDLGEKAP-DKVLHQLY 123 (528)
Q Consensus 52 ~~~~ip~~~~~~~~~-~~---~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~q--V-~dL~~~~p-~~~l~~~~ 123 (528)
..|..|..++..... .. ...... ++++|+..+.+-. .+.+.+.+.|.... + +....+.| .+.++++.
T Consensus 5 ~~~~~p~~i~~G~g~~~~l~~~l~~~g-~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~~ge~~~~~v~~~~ 79 (370)
T 1jq5_A 5 RVFISPAKYVQGKNVITKIANYLEGIG-NKTVVIADEIVWK----IAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIA 79 (370)
T ss_dssp BCCCCCSEEEEETTGGGGHHHHHTTTC-SEEEEEECHHHHH----HTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHH
T ss_pred eEecCCCeEEECcCHHHHHHHHHHHcC-CeEEEEEChHHHH----HHHHHHHHHHHHcCCeEEEEeeCCCCCHHHHHHHH
Confidence 456667765554321 11 111222 7889988765532 35667777775433 2 22222222 22222222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC--CCCcch
Q 009691 124 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNI 184 (528)
Q Consensus 124 ~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPl--GTGNDl 184 (528)
.. ++ + .+...||++|| |++.-+...+.-. ..+|+..||- |||--.
T Consensus 80 ~~---~~--------~-~~~d~IIavGG-Gsv~D~aK~iA~~---~~~p~i~IPTTa~tgSev 126 (370)
T 1jq5_A 80 NI---AR--------K-AEAAIVIGVGG-GKTLDTAKAVADE---LDAYIVIVPTAASTDAPT 126 (370)
T ss_dssp HH---HH--------H-TTCSEEEEEES-HHHHHHHHHHHHH---HTCEEEEEESSCCSSCTT
T ss_pred HH---HH--------h-cCCCEEEEeCC-hHHHHHHHHHHHh---cCCCEEEeccccCCCccc
Confidence 21 11 1 13457888888 8888888877642 4688999996 444333
No 39
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=34.57 E-value=1.8e+02 Score=29.61 Aligned_cols=115 Identities=12% Similarity=0.074 Sum_probs=56.5
Q ss_pred ccccccccCceeccCCcc-c---ccCCC---CCCeEEEEEcCcCCCCChhhHHHHHHHHhcc--CcEEEEeecCchhHHH
Q 009691 50 ILNNYYIPNYILVSGSEV-Q---RSSLI---PSCPVLVFINSKSGGQLGGKLLLTYRSLLNE--NQVIDLGEKAPDKVLH 120 (528)
Q Consensus 50 ~~~~~~ip~~~~~~~~~~-~---~~~~~---~~~pllVivNPkSGg~~g~~ll~~~~~~L~~--~qV~dL~~~~p~~~l~ 120 (528)
..+.|..|+.++.-.... . ..... ..++++||..+.-- ...+. +.|.. .++..+....+...++
T Consensus 21 ~~~~f~~p~~i~~G~g~l~~l~~~l~~~g~~~~~~~liVtd~~~~---~~~l~----~~L~~~g~~~~~f~~v~~~pt~~ 93 (375)
T 3rf7_A 21 SFKNFKCVPKMIFGRGSFVQLDTVLEQERTDANDFVVFLVDDVHQ---HKPLA----ARVPNKAHDLVIYVNVDDEPTTV 93 (375)
T ss_dssp TSCCCCCCSCEEESTTGGGGHHHHHHTTCCSTTCCEEEEEEGGGT---TSHHH----HHSCCCTTSEEEEECCSSCCBHH
T ss_pred chhhhcCCCeEEEcCCHHHHHHHHHHHhcccCCCeEEEEECchhh---hhHHH----HHHHhcCCeEEEEeCCCCCCCHH
Confidence 457899999887765321 1 11111 13678888875432 12233 33432 2332222222222222
Q ss_pred HHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEeeC
Q 009691 121 QLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL 178 (528)
Q Consensus 121 ~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~---------------~~~~~plgiIPl 178 (528)
.+.+.++.+++.+ ..+.+.||++|| |++.-+...+.-.- ....+|+..||-
T Consensus 94 ~v~~~~~~~~~~~------~~~~D~IIavGG-GS~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~P~i~IPT 159 (375)
T 3rf7_A 94 QVDELTAQVKAFN------TKLPVSVVGLGG-GSTMDLAKAVSLMLTNPGSSSEYQGWDLIKNPAVHHIGIPT 159 (375)
T ss_dssp HHHHHHHHHHHHC------SSCCSEEEEEES-HHHHHHHHHHHHHTSSCSCGGGGCEESCCCSCCCCEEEEES
T ss_pred HHHHHHHHHHHhC------CCCCCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHhhccccccCCCCCEEEEcC
Confidence 2333322221110 012567999999 88888877664321 013578999994
No 40
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=33.97 E-value=88 Score=30.58 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=24.2
Q ss_pred hhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 135 VFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 135 ~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
+++.-....+.+|..|| +|+.|++. ...|.-+||.
T Consensus 218 ~m~~~m~~aDlvI~~gG-~T~~E~~~--------~g~P~i~ip~ 252 (282)
T 3hbm_A 218 NIAKLMNESNKLIISAS-SLVNEALL--------LKANFKAICY 252 (282)
T ss_dssp CHHHHHHTEEEEEEESS-HHHHHHHH--------TTCCEEEECC
T ss_pred HHHHHHHHCCEEEECCc-HHHHHHHH--------cCCCEEEEeC
Confidence 44444445566888898 99999873 2567778885
No 41
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=33.05 E-value=74 Score=33.40 Aligned_cols=111 Identities=11% Similarity=0.016 Sum_probs=59.5
Q ss_pred ccccccccccCceeccCCc-cc---ccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccC--cE-EEEeecCchhHHH
Q 009691 48 SKILNNYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV-IDLGEKAPDKVLH 120 (528)
Q Consensus 48 ~~~~~~~~ip~~~~~~~~~-~~---~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~--qV-~dL~~~~p~~~l~ 120 (528)
+.+...|..|..++..... .. .......++++|+..+.+-. .+.+.+.+.|... ++ +....+.|.. +
T Consensus 60 ~~~~~~f~~p~~i~~G~g~l~~l~~~l~~~g~~rvlIVtd~~~~~----~~~~~v~~~L~~~gi~~~~~~~~ge~~~--~ 133 (450)
T 1ta9_A 60 ESKDRIFTSPQKYVQGRHAFTRSYMYVKKWATKSAVVLADQNVWN----ICANKIVDSLSQNGMTVTKLVFGGEASL--V 133 (450)
T ss_dssp CCSSEEEECCSEEEEETTGGGGHHHHHTTTCSSEEEEEEEHHHHH----HTHHHHHHHHHHTTCEEEEEEECSCCCH--H
T ss_pred CccceEEeCCceEEECcCHHHHHHHHHHhcCCCEEEEEECccHHH----HHHHHHHHHHHHCCCeEEEEeeCCCCCH--H
Confidence 4444667778776554321 11 11122234888888765532 2456666666543 22 2222222221 1
Q ss_pred HHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEeeC
Q 009691 121 QLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 178 (528)
Q Consensus 121 ~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~~~~~~plgiIPl 178 (528)
.+.+..+ ++++ +.+.||++|| |++.-+...+.-. ..+|+..||-
T Consensus 134 ~v~~~~~--------~~~~--~~D~IIAvGG-GSviD~AK~iA~~---~giP~I~IPT 177 (450)
T 1ta9_A 134 ELDKLRK--------QCPD--DTQVIIGVGG-GKTMDSAKYIAHS---MNLPSIICPT 177 (450)
T ss_dssp HHHHHHT--------TSCT--TCCEEEEEES-HHHHHHHHHHHHH---TTCCEEEEES
T ss_pred HHHHHHH--------HHhh--CCCEEEEeCC-cHHHHHHHHHHHh---cCCCEEEEeC
Confidence 1222211 1222 3456888888 8988888877643 4689999996
No 42
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=31.85 E-value=23 Score=32.41 Aligned_cols=65 Identities=15% Similarity=0.094 Sum_probs=39.8
Q ss_pred EEEEEcCchHHH---HHHHHHhcCCCCCCCCEEEeeCCCCcchhhccCCCCCC---CCChhHHHHHHHHHHHcC
Q 009691 145 RLIVAGGDGTAS---WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKN---PNTDQQAVLSFLEQVKNA 212 (528)
Q Consensus 145 ~IIV~GGDGTV~---~Vl~~l~~~~~~~~~plgiIPlGTGNDlAR~LGwg~~~---~~~~~~~~~~~l~~I~~a 212 (528)
.-..++|+.|.. +++..+.. +..+|-+.+|=+|| ||+.+....+... ...-..++.++++.+.+.
T Consensus 56 ~N~g~~G~t~~~~~~~~~~~~~~--~~~~pd~Vii~~G~-ND~~~~~~~~~~~~~~~~~f~~~l~~li~~l~~~ 126 (232)
T 3dc7_A 56 DNLGISGSTIGSRYDAMAVRYQA--IPEDADFIAVFGGV-NDYGRDQPLGQYGDCDMTTFYGALMMLLTGLQTN 126 (232)
T ss_dssp EEEECTTCCSSTTSSCHHHHGGG--SCTTCSEEEEECCH-HHHHTTCCCCCTTCCSTTSHHHHHHHHHHHHHHH
T ss_pred EEeeeCCcccccChHHHHHHHHh--cCCCCCEEEEEEec-cccccCcCCccccccchHHHHHHHHHHHHHHHHh
Confidence 345677887775 56666555 34577899999997 9998743222100 001112677888887754
No 43
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=31.68 E-value=2e+02 Score=26.54 Aligned_cols=87 Identities=13% Similarity=0.085 Sum_probs=48.1
Q ss_pred eEEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 009691 77 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 155 (528)
Q Consensus 77 pllVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV 155 (528)
.+.||.= +..-..+.+.....|....| |++...+.+...+++..-.+...+ ..-.+.|.++||.+-+
T Consensus 23 ~V~IimG----S~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~--------~g~~ViIa~AG~aa~L 90 (182)
T 1u11_A 23 VVGIIMG----SQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAE--------RGLNVIIAGAGGAAHL 90 (182)
T ss_dssp SEEEEES----SGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTT--------TTCCEEEEEEESSCCH
T ss_pred EEEEEEC----cHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHh--------CCCcEEEEecCchhhh
Confidence 4666654 43444566666666666555 776543333222222221111000 0113568899999999
Q ss_pred HHHHHHHhcCCCCCCCCEEEeeCCCC
Q 009691 156 SWLLGVVSDLKLPHSPPVATVPLGTG 181 (528)
Q Consensus 156 ~~Vl~~l~~~~~~~~~plgiIPlGTG 181 (528)
--|+.++.. .|.||+ |.-++
T Consensus 91 pgvvA~~t~-----~PVIgV-P~~~~ 110 (182)
T 1u11_A 91 PGMCAAWTR-----LPVLGV-PVESR 110 (182)
T ss_dssp HHHHHHHCS-----SCEEEE-EECCT
T ss_pred HHHHHhccC-----CCEEEe-eCCCC
Confidence 999998853 355555 66554
No 44
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=30.35 E-value=2e+02 Score=29.37 Aligned_cols=122 Identities=17% Similarity=0.163 Sum_probs=60.0
Q ss_pred cccccCceeccCCc-cc---ccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccC--cEEEEeecCchhHHHHHHHHH
Q 009691 53 NYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTL 126 (528)
Q Consensus 53 ~~~ip~~~~~~~~~-~~---~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~--qV~dL~~~~p~~~l~~~~~~l 126 (528)
.|..|+.++..... .. .......++++|+..+.+-.. ..+.+.+.+.|... .+..+....|...++.+.+.+
T Consensus 17 ~~~~p~~i~~G~g~l~~l~~~l~~~g~~r~liVtd~~~~~~--~g~~~~v~~~L~~~g~~~~~f~~v~~~p~~~~v~~~~ 94 (407)
T 1vlj_A 17 VFHNPTKIVFGRGTIPKIGEEIKNAGIRKVLFLYGGGSIKK--NGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAV 94 (407)
T ss_dssp EECCCCEEEESTTCGGGHHHHHHHTTCCEEEEEECSSHHHH--SSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHH
T ss_pred eEecCCeEEECcCHHHHHHHHHHHcCCCeEEEEECchHHhh--ccHHHHHHHHHHHcCCeEEEecCccCCCCHHHHHHHH
Confidence 45667766654322 11 111112367888876332111 12566666666543 232232222222223233333
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEeeC--CCCcchhh
Q 009691 127 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNIPF 186 (528)
Q Consensus 127 ~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~---------------~~~~~plgiIPl--GTGNDlAR 186 (528)
+.+++ .+.+.||++|| |++.-+...+.-.- ....+|+..||- |||--...
T Consensus 95 ~~~~~---------~~~D~IIavGG-GsviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSevt~ 161 (407)
T 1vlj_A 95 EVAKK---------EKVEAVLGVGG-GSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMNG 161 (407)
T ss_dssp HHHHH---------TTCSEEEEEES-HHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGSS
T ss_pred HHHHh---------cCCCEEEEeCC-hhHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcchhhcC
Confidence 22211 23457888888 88888877664320 124678999995 55544443
No 45
>3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F}
Probab=29.58 E-value=16 Score=35.99 Aligned_cols=15 Identities=47% Similarity=0.762 Sum_probs=12.3
Q ss_pred CcEEEEEcCchHHHH
Q 009691 143 RLRLIVAGGDGTASW 157 (528)
Q Consensus 143 ~~~IIV~GGDGTV~~ 157 (528)
..|||||||+||-+.
T Consensus 46 ~q~~i~~g~~~t~~~ 60 (275)
T 3gw6_A 46 GQRIIFCGGEGTSST 60 (275)
T ss_dssp GCEEEEESSSSSSTT
T ss_pred ccEEEEecCCCCCCC
Confidence 458999999999653
No 46
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=28.81 E-value=3.3e+02 Score=24.74 Aligned_cols=80 Identities=10% Similarity=0.044 Sum_probs=43.6
Q ss_pred CCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC
Q 009691 87 GGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL 165 (528)
Q Consensus 87 Gg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~ 165 (528)
|+..-..+.+.....|....+ |++...+.+...+++..-.+...+ ..-.+.|.++||.+-+--++.++..
T Consensus 14 gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~--------~g~~ViIa~AG~aa~LpgvvA~~t~- 84 (169)
T 3trh_A 14 GSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADN--------RGCAVFIAAAGLAAHLAGTIAAHTL- 84 (169)
T ss_dssp SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHH--------TTEEEEEEEECSSCCHHHHHHHTCS-
T ss_pred CcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHh--------CCCcEEEEECChhhhhHHHHHhcCC-
Confidence 444445566677777766555 776543322222222221111110 0112468899999999999988753
Q ss_pred CCCCCCCEEEeeCCC
Q 009691 166 KLPHSPPVATVPLGT 180 (528)
Q Consensus 166 ~~~~~~plgiIPlGT 180 (528)
.|.||+ |.-+
T Consensus 85 ----~PVIgV-P~~~ 94 (169)
T 3trh_A 85 ----KPVIGV-PMAG 94 (169)
T ss_dssp ----SCEEEE-ECCC
T ss_pred ----CCEEEe-ecCC
Confidence 355565 6543
No 47
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=27.53 E-value=89 Score=31.23 Aligned_cols=85 Identities=16% Similarity=0.117 Sum_probs=48.6
Q ss_pred CeEEEEEcCcCCCCChhhHHHHHHHHhccC--cE--EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 009691 76 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 151 (528)
Q Consensus 76 ~pllVivNPkSGg~~g~~ll~~~~~~L~~~--qV--~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GG 151 (528)
++++|+..+..-. .+.+.+.+.|... ++ |+. ...| .++.+.+. +.++ + .+...||++||
T Consensus 35 ~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~-~~~~--~~~~v~~~-~~~~--------~-~~~d~IIavGG 97 (354)
T 3ce9_A 35 KRVSLYFGEGIYE----LFGETIEKSIKSSNIEIEAVET-VKNI--DFDEIGTN-AFKI--------P-AEVDALIGIGG 97 (354)
T ss_dssp SEEEEEEETTHHH----HHHHHHHHHHHTTTCEEEEEEE-ECCC--BHHHHHHH-HTTS--------C-TTCCEEEEEES
T ss_pred CeEEEEECccHHH----HHHHHHHHHHHHcCCeEEEEec-CCCC--CHHHHHHH-HHhh--------h-cCCCEEEEECC
Confidence 5888988765532 3566777777543 23 332 2233 22222222 2211 1 23456888887
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEeeCCCC
Q 009691 152 DGTASWLLGVVSDLKLPHSPPVATVPLGTG 181 (528)
Q Consensus 152 DGTV~~Vl~~l~~~~~~~~~plgiIPlGTG 181 (528)
|++.-+...+.-. ..+|+..||-=.|
T Consensus 98 -Gsv~D~aK~vA~~---~~~p~i~IPTT~~ 123 (354)
T 3ce9_A 98 -GKAIDAVKYMAFL---RKLPFISVPTSTS 123 (354)
T ss_dssp -HHHHHHHHHHHHH---HTCCEEEEESCCS
T ss_pred -hHHHHHHHHHHhh---cCCCEEEecCccc
Confidence 8888888877632 4689999996333
No 48
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=27.42 E-value=1.6e+02 Score=26.53 Aligned_cols=76 Identities=13% Similarity=0.193 Sum_probs=43.9
Q ss_pred CCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC
Q 009691 87 GGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL 165 (528)
Q Consensus 87 Gg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~ 165 (528)
|+..-..+.+.....|....+ ||+...+.+...+++.. ++++......|.++||.|-+--++.++..
T Consensus 7 gs~SD~~v~~~a~~~l~~~gi~~dv~V~saHR~p~~~~~-----------~~~~a~~~ViIa~AG~aa~Lpgvva~~t~- 74 (157)
T 2ywx_A 7 GSESDLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEE-----------IVKNSKADVFIAIAGLAAHLPGVVASLTT- 74 (157)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHH-----------HHHHCCCSEEEEEEESSCCHHHHHHTTCS-
T ss_pred ccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHH-----------HHHhcCCCEEEEEcCchhhhHHHHHhccC-
Confidence 444444566666666766555 77655333322222211 11222235679999999999999987643
Q ss_pred CCCCCCCEEEeeCC
Q 009691 166 KLPHSPPVATVPLG 179 (528)
Q Consensus 166 ~~~~~~plgiIPlG 179 (528)
.|.||+ |.|
T Consensus 75 ----~PVIgV-P~~ 83 (157)
T 2ywx_A 75 ----KPVIAV-PVD 83 (157)
T ss_dssp ----SCEEEE-EEC
T ss_pred ----CCEEEe-cCC
Confidence 355555 663
No 49
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=27.16 E-value=15 Score=28.13 Aligned_cols=10 Identities=10% Similarity=0.132 Sum_probs=9.6
Q ss_pred EEEEcCchHH
Q 009691 146 LIVAGGDGTA 155 (528)
Q Consensus 146 IIV~GGDGTV 155 (528)
|+||+||||+
T Consensus 41 ViVg~~dgtv 50 (65)
T 2x9a_A 41 IGIGYDNDTS 50 (65)
T ss_dssp EEEEETTTTE
T ss_pred EEEECCCCCE
Confidence 9999999997
No 50
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=25.74 E-value=62 Score=35.09 Aligned_cols=40 Identities=18% Similarity=0.184 Sum_probs=28.3
Q ss_pred cEEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEeeCCCCcchh
Q 009691 144 LRLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIP 185 (528)
Q Consensus 144 ~~IIV~GGDGTV~~Vl~---~l~~~~~~~~~plgiIPlGTGNDlA 185 (528)
..+|++|||||..-+.. .+.+. ...+++--||-==-||++
T Consensus 168 d~LvvIGGdgS~~~A~~L~e~~~~~--~~~i~vIGiPkTIDNDl~ 210 (555)
T 2f48_A 168 NAIIIIGGDDSNTNAAILAEYFKKN--GENIQVIGVPKTIDADLR 210 (555)
T ss_dssp SEEEEEESHHHHHHHHHHHHHHHHT--TCCCEEEEEEEETTCCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHHHh--CCCCcEEEeccccCCCCC
Confidence 36999999999764432 22221 236788888998899996
No 51
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=24.32 E-value=2.9e+02 Score=25.45 Aligned_cols=88 Identities=14% Similarity=0.186 Sum_probs=47.3
Q ss_pred CCe-EEEEEcCcCCCCChhhHHHHHHHHhccCcE-EEEeecCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 009691 75 SCP-VLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 152 (528)
Q Consensus 75 ~~p-llVivNPkSGg~~g~~ll~~~~~~L~~~qV-~dL~~~~p~~~l~~~~~~l~~l~~~~~~~a~~~~~~~~IIV~GGD 152 (528)
.+| +-||. |+..-..+.+...+.|....| |++...+.....++++.-.+... +..-.+.|.++||.
T Consensus 21 mkp~V~Iim----GS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~--------~~g~~ViIa~AG~a 88 (181)
T 4b4k_A 21 MKSLVGVIM----GSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETAR--------ERGLKVIIAGAGGA 88 (181)
T ss_dssp -CCSEEEEE----SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTT--------TTTCCEEEEEECSS
T ss_pred CCccEEEEE----CCHhHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHH--------hcCceEEEEecccc
Confidence 355 44555 444445667777777877766 77654332222222222211111 01113468889999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEeeCCC
Q 009691 153 GTASWLLGVVSDLKLPHSPPVATVPLGT 180 (528)
Q Consensus 153 GTV~~Vl~~l~~~~~~~~~plgiIPlGT 180 (528)
+-+--++.++.. .|.||+ |.-+
T Consensus 89 ahLpGvvAa~T~-----~PVIGV-Pv~s 110 (181)
T 4b4k_A 89 AHLPGMVAAKTN-----LPVIGV-PVQS 110 (181)
T ss_dssp CCHHHHHHTTCC-----SCEEEE-ECCC
T ss_pred ccchhhHHhcCC-----CCEEEE-ecCC
Confidence 999999876532 344555 6633
No 52
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=23.77 E-value=1.3e+02 Score=30.37 Aligned_cols=120 Identities=12% Similarity=0.109 Sum_probs=59.4
Q ss_pred cccccCceeccCCc-cc---ccCCCCCCeEEEEEcCcCCCCChhhHHHHHHHHhccC--cEEEEeecCchhHHHHHHHHH
Q 009691 53 NYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTL 126 (528)
Q Consensus 53 ~~~ip~~~~~~~~~-~~---~~~~~~~~pllVivNPkSGg~~g~~ll~~~~~~L~~~--qV~dL~~~~p~~~l~~~~~~l 126 (528)
.|..|..++..... .. .......++++|+..+..- ...+.+.+.+.|... .+..+....+...++.+.+.+
T Consensus 5 ~f~~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~---~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~ 81 (386)
T 1rrm_A 5 RMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLV---QCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGL 81 (386)
T ss_dssp EEECCSEEEESTTGGGGHHHHHHHHTCCEEEEECBHHHH---HTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHH
T ss_pred cccCCceEEECcCHHHHHHHHHHHcCCCEEEEEECcchh---hchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 46667766554321 10 1111123678888764431 112566777777543 232233222222223233333
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC---C--------------CCCCCEEEeeC--CCCcchh
Q 009691 127 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---L--------------PHSPPVATVPL--GTGNNIP 185 (528)
Q Consensus 127 ~~l~~~~~~~a~~~~~~~~IIV~GGDGTV~~Vl~~l~~~~---~--------------~~~~plgiIPl--GTGNDlA 185 (528)
+.+++ .+.+.||++|| |++.-+...+.-.- - ...+|+..||- |||--..
T Consensus 82 ~~~~~---------~~~d~IIavGG-Gsv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSevt 149 (386)
T 1rrm_A 82 GVFQN---------SGADYLIAIGG-GSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVT 149 (386)
T ss_dssp HHHHH---------HTCSEEEEEES-HHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTTTC
T ss_pred HHHHh---------cCcCEEEEeCC-hHHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCCCchhhhC
Confidence 22211 23467888888 88887776553210 0 24689999996 5554433
No 53
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=21.52 E-value=1e+02 Score=27.30 Aligned_cols=38 Identities=18% Similarity=0.151 Sum_probs=26.2
Q ss_pred CEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcCC
Q 009691 172 PVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAK 213 (528)
Q Consensus 172 plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a~ 213 (528)
-+.+|=+|| ||+.+..+++. ..-..++.++++.+....
T Consensus 85 d~vvi~~G~-ND~~~~~~~~~---~~~~~~l~~li~~~~~~~ 122 (216)
T 2q0q_A 85 DLVIIMLGT-NDTKAYFRRTP---LDIALGMSVLVTQVLTSA 122 (216)
T ss_dssp SEEEEECCT-GGGSGGGCCCH---HHHHHHHHHHHHHHHTCT
T ss_pred CEEEEEecC-cccchhcCCCH---HHHHHHHHHHHHHHHHhc
Confidence 799999998 99987666542 112345777788877654
No 54
>1sfu_A 34L protein; protein/Z-DNA complex, DNA binding protein/DNA complex; 2.00A {Yaba-like disease virus} SCOP: a.4.5.19
Probab=21.42 E-value=43 Score=26.61 Aligned_cols=32 Identities=9% Similarity=0.078 Sum_probs=24.6
Q ss_pred CCcchhhccCCCCCCCCChhHHHHHHHHHHHc-CCeeeEe
Q 009691 180 TGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN-AKEMQID 218 (528)
Q Consensus 180 TGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~-a~~~~iD 218 (528)
|.+++||.||.++ ..+.++|-.+.+ |.+..++
T Consensus 31 Ta~~IAkkLg~sK-------~~vNr~LY~L~kkG~V~~~~ 63 (75)
T 1sfu_A 31 TAISLSNRLKINK-------KKINQQLYKLQKEDTVKMVP 63 (75)
T ss_dssp CHHHHHHHTTCCH-------HHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHHHCCCH-------HHHHHHHHHHHHCCCEecCC
Confidence 7899999999986 568888888765 5555443
No 55
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=21.10 E-value=57 Score=28.67 Aligned_cols=37 Identities=27% Similarity=0.323 Sum_probs=24.3
Q ss_pred CCCEEEeeCCCCcchhhccCCCCCCCCChhHHHHHHHHHHHcC
Q 009691 170 SPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNA 212 (528)
Q Consensus 170 ~~plgiIPlGTGNDlAR~LGwg~~~~~~~~~~~~~~l~~I~~a 212 (528)
+|-+.+|=+|| ||+.+. ++. .....++.++++.+...
T Consensus 62 ~pd~Vii~~G~-ND~~~~--~~~---~~~~~~l~~li~~~~~~ 98 (190)
T 1ivn_A 62 QPRWVLVELGG-NDGLRG--FQP---QQTEQTLRQILQDVKAA 98 (190)
T ss_dssp CCSEEEEECCT-TTTSSS--CCH---HHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEeec-cccccC--CCH---HHHHHHHHHHHHHHHHc
Confidence 57899999997 998752 221 11234577778887764
No 56
>3lhl_A Putative agmatinase; protein structure initiative II(PSI II), nysgxrc structural genomics, NEW YORK SGX research center for struc genomics; 2.30A {Clostridium difficile}
Probab=21.02 E-value=2.6e+02 Score=27.25 Aligned_cols=42 Identities=7% Similarity=0.109 Sum_probs=29.6
Q ss_pred cCcEEEEEcCchHHHHHH-HHHhcCCCCCCCCEEEeeCCCCcchhhc
Q 009691 142 KRLRLIVAGGDGTASWLL-GVVSDLKLPHSPPVATVPLGTGNNIPFS 187 (528)
Q Consensus 142 ~~~~IIV~GGDGTV~~Vl-~~l~~~~~~~~~plgiIPlGTGNDlAR~ 187 (528)
.....|+.|||-++.+-. .++.+ ...++++|=+-.=-||-..
T Consensus 87 ~g~~pi~lGGdHsit~~~~~a~~~----~~~~l~vI~~DAH~Dl~~~ 129 (287)
T 3lhl_A 87 DSKVPFMIGGEHLVTLPAFKAVHE----KYNDIYVIHFDAHTDLREE 129 (287)
T ss_dssp TTCEEEEEESSGGGHHHHHHHHHH----HCSSEEEEEECSBCCCCSC
T ss_pred CCCeEEEeCCcchhhHHHHHHHHH----hcCCcEEEEecCCcccCcc
Confidence 456789999999987643 45544 2257999988777777443
Done!