Your job contains 1 sequence.
>009694
MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT
INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL
VQSVKQMKLDGELANKGIQQMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDIT
GPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEAL
IASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS
YCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITE
EPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGISDAQTSTSGV
KTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEVASQLT
GGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPSPKKY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009694
(528 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087901 - symbol:Tic62 "translocon at the inne... 1260 7.7e-131 2
TAIR|locus:2040854 - symbol:AT2G34460 species:3702 "Arabi... 304 1.1e-26 1
TAIR|locus:2102842 - symbol:PTAC16 "plastid transcription... 250 1.9e-18 1
TAIR|locus:2040716 - symbol:AT2G37660 species:3702 "Arabi... 176 1.1e-10 1
TAIR|locus:2185228 - symbol:AT5G02240 species:3702 "Arabi... 169 1.7e-10 1
TAIR|locus:2180019 - symbol:PCB2 "PALE-GREEN AND CHLOROPH... 152 1.0e-07 1
UNIPROTKB|Q71X34 - symbol:LMOf2365_2365 "Putative unchara... 87 0.00072 2
>TAIR|locus:2087901 [details] [associations]
symbol:Tic62 "translocon at the inner envelope membrane
of chloroplasts 62" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0010103
"stomatal complex morphogenesis" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019684 "photosynthesis, light
reaction" evidence=RCA] InterPro:IPR016040 GO:GO:0009570
EMBL:CP002686 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0015031
GO:GO:0009941 GO:GO:0009706 GO:GO:0009535 eggNOG:COG0702
EMBL:AP002039 EMBL:BT002039 EMBL:BT008403 IPI:IPI00530638
RefSeq:NP_188519.2 UniGene:At.27605 ProteinModelPortal:Q8H0U5
STRING:Q8H0U5 PaxDb:Q8H0U5 PRIDE:Q8H0U5 EnsemblPlants:AT3G18890.1
GeneID:821422 KEGG:ath:AT3G18890 TAIR:At3g18890
HOGENOM:HOG000090541 InParanoid:Q8H0U5 OMA:ICCIGAS PhylomeDB:Q8H0U5
ProtClustDB:PLN03209 Genevestigator:Q8H0U5 Uniprot:Q8H0U5
Length = 641
Score = 1260 (448.6 bits), Expect = 7.7e-131, Sum P(2) = 7.7e-131
Identities = 284/511 (55%), Positives = 347/511 (67%)
Query: 4 CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
C L+ Q L+TIPS SR G +++ + + +I++F K S K + D +ASG I
Sbjct: 5 CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRA 64
Query: 64 CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
S A+PT +SK+++L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65 SSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124
Query: 124 VKQMKLDGELANKGIQ--QMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 181
VK+MKL ++G Q + LE+VECDLEK+ I+PALGNASV+ICCIGASEKE+ DITG
Sbjct: 125 VKEMKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182
Query: 182 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 241
PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI
Sbjct: 183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALI 242
Query: 242 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 301
SGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN LS+
Sbjct: 243 ESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSF 302
Query: 302 CKVVEVIAETTAPLTPMEELLAKIPSQRA---EPKESIAPEKSDPAASKSMISEESSAPI 358
K+VEV+AETTAPLTP+E+LL KIPS+R PK S+A ++ P +K +++E +AP
Sbjct: 303 SKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKP-VTQEPTAPK 361
Query: 359 TEE-PVQTKAKVTDPLSPYTSYEDLK--XXXXXXXXXXXGKKDSTIVDG--LPM-SGISD 412
+E P + K PLSPY SYEDLK S VD +P+ + +
Sbjct: 362 EDEAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVPVEANVVP 421
Query: 413 AQTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKXXXXXXXXXXXXKEVLSSSSTT 472
STS V + E V EE K RPLSPY YE+LK ++ S S +
Sbjct: 422 VPDSTSNVP--VVE-VKQVEE-KKERPLSPYARYENLKPPSSPSPTASSTRK--SDSLSP 475
Query: 473 GEVASQLTGGNDVAKTPDTSLVEKNPIVNSI 503
G S + VAKT + V + S+
Sbjct: 476 GPTDSDTDKSSTVAKTVTETAVATSVTETSV 506
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 51/188 (27%), Positives = 75/188 (39%)
Query: 310 ETTAPLTPMEELLAKIPSQRAE-PKESI--APEKSDPAASKSMISEESSAPITEEPVQTK 366
E A P+E + +P + P + EK + S E P + P +
Sbjct: 407 EVDATQVPVEANVVPVPDSTSNVPVVEVKQVEEKKERPLSPYARYENLKPPSSPSPTASS 466
Query: 367 AKVTDPLSPYTSYEDLKXXXXXXXXXXXGKKDSTIVDGLPMSGISDAQTSTSGVKTGITE 426
+ +D LSP + D ++ + + + ++ + T+ V T +TE
Sbjct: 467 TRKSDSLSPGPTDSDTDKSSTVAKTVT----ETAVATSVTETSVATSVPETA-VATSVTE 521
Query: 427 TVSAPEELSKARPLSPYFAYEDLKXXXXXXXXXXXXKEVLSSSSTTGEVASQLTGGN-DV 485
T +AP SK RPLSPY Y DLK KE S S+L GGN DV
Sbjct: 522 T-AAPAT-SKMRPLSPYAIYADLKPPTSPTPASTGPKEAASVEDN-----SELPGGNNDV 574
Query: 486 AKTPDTSL 493
KT D +L
Sbjct: 575 LKTVDGNL 582
Score = 44 (20.5 bits), Expect = 7.7e-131, Sum P(2) = 7.7e-131
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 466 LSSSSTTGEVASQLTGGNDVAKTPDT----SLVEKN-PIVNSIHHHSPYHMYEDL 515
++ + T VA+ +T + P+T S+ E P + + SPY +Y DL
Sbjct: 488 VAKTVTETAVATSVTETSVATSVPETAVATSVTETAAPATSKMRPLSPYAIYADL 542
>TAIR|locus:2040854 [details] [associations]
symbol:AT2G34460 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010287
"plastoglobule" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] InterPro:IPR016040
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0009941 GO:GO:0009535 GO:GO:0010287
EMBL:AC004077 EMBL:AC004481 eggNOG:COG0702 EMBL:AY034977
EMBL:AY056425 EMBL:BT000884 IPI:IPI00536241 PIR:T02333
RefSeq:NP_565789.2 UniGene:At.48549 UniGene:At.60259
ProteinModelPortal:Q8H124 SMR:Q8H124 IntAct:Q8H124 STRING:Q8H124
PaxDb:Q8H124 PRIDE:Q8H124 EnsemblPlants:AT2G34460.1 GeneID:818009
KEGG:ath:AT2G34460 TAIR:At2g34460 HOGENOM:HOG000262433
InParanoid:Q8H124 OMA:NFRAVEL PhylomeDB:Q8H124 ProtClustDB:PLN00141
Genevestigator:Q8H124 Uniprot:Q8H124
Length = 280
Score = 304 (112.1 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 89/251 (35%), Positives = 131/251 (52%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQQMLE 143
FVAGATG+ G R V +LL GF V+AGVR V++A+ + +++ +G ++ E
Sbjct: 50 FVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVRADVTEGPDKLAE 109
Query: 144 LVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN 203
++ D + VIC G + FDI P+++D T NLVDA V
Sbjct: 110 VIGDD-------------SQAVICATGF--RPGFDIFTPWKVDNFGTVNLVDACRKQGVE 154
Query: 204 HFIMVSSLGTNKFGF-----PAAI-LNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMER 257
F++VSS+ N PA + LNLF L+ K +AE+ + SG+ YTIVRPGG++
Sbjct: 155 KFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGLKN 214
Query: 258 PTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTP 317
T N+ + EDTL+ G +S VAE+ A A + S KVVE++A AP
Sbjct: 215 DPP----TGNVVMEPEDTLYEGSISRDLVAEV-AVEALLQEESSFKVVEIVARAEAPKRS 269
Query: 318 MEELLAKIPSQ 328
++L A + Q
Sbjct: 270 YKDLFASVKGQ 280
>TAIR|locus:2102842 [details] [associations]
symbol:PTAC16 "plastid transcriptionally active 16"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009295
"nucleoid" evidence=IDA] [GO:0009508 "plastid chromosome"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0007623 "circadian
rhythm" evidence=IEP] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010114 "response to red light"
evidence=RCA] [GO:0010218 "response to far red light" evidence=RCA]
[GO:0015979 "photosynthesis" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0016117 "carotenoid
biosynthetic process" evidence=RCA] [GO:0019684 "photosynthesis,
light reaction" evidence=RCA] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] [GO:0034660 "ncRNA metabolic
process" evidence=RCA] InterPro:IPR016040 EMBL:CP002686
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0007623 GO:GO:0009941
GO:GO:0009535 EMBL:AL096859 UniGene:At.21811 InterPro:IPR008030
Pfam:PF05368 GO:GO:0009508 IPI:IPI00542797 PIR:T12970
RefSeq:NP_566886.2 UniGene:At.21714 UniGene:At.71100
UniGene:At.71553 ProteinModelPortal:Q9STF2 SMR:Q9STF2 IntAct:Q9STF2
STRING:Q9STF2 PRIDE:Q9STF2 ProMEX:Q9STF2 EnsemblPlants:AT3G46780.1
GeneID:823831 KEGG:ath:AT3G46780 TAIR:At3g46780
HOGENOM:HOG000029181 InParanoid:Q9STF2 OMA:YTLIKTS PhylomeDB:Q9STF2
ProtClustDB:CLSN2680891 Genevestigator:Q9STF2 Uniprot:Q9STF2
Length = 510
Score = 250 (93.1 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 111/419 (26%), Positives = 187/419 (44%)
Query: 49 KLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVR 108
KLPD K+ N + V K KD FVAGATG+ G R + LL+ GF VR
Sbjct: 63 KLPDMKSLIPVVTNPSTGLVFGNNRK---KDPGTIFVAGATGQAGIRIAQTLLQRGFSVR 119
Query: 109 AGVRSVQRAENLVQSVKQMKLDGELANKGIQQMLELVECDLEKRVQIEPALGNASVVICC 168
AGV + A++L + K+ L+N +++ L V+ + I A+GNA+ V+
Sbjct: 120 AGVPDLGAAQDLARVAATYKI---LSNDEVKR-LNAVQSPFQDAESIAKAIGNATKVVVT 175
Query: 169 IGASEKEVFDITGP-YRIDFQATKNLVDAATIAKVNHFIMV--SSLGTNKFGFPAAILNL 225
+GA+E GP ++ +V AA +A V+H +V ++ + + I +
Sbjct: 176 VGATEN------GPDAQVSTSDALLVVQAAELAGVSHVAIVYDGTISGSTYNVLDGITS- 228
Query: 226 FWGVLLWKRKAE------EALIASGLPYTIVRPGGME--RPTDAYKETHNITLSQEDTLF 277
F+G L K + E + + + YT+++ E P AY N+ +S E +
Sbjct: 229 FFGNLFAKSQPLTISDLIEKVAQTDVAYTLIKTSLTEDFSPEKAY----NVVVSAEGSNS 284
Query: 278 GG--------QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS-- 327
G +V L++A L+A + N +++ KVVEV + +AP P++EL + IP
Sbjct: 285 GSGSSSSEAYKVPKLKIASLVADIFANTAVAENKVVEVSTDPSAPSRPVDELFSVIPEDG 344
Query: 328 QRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSY-EDLKXXX 386
+R ++IA E+++ A + +A +E + K+++ + S ED +
Sbjct: 345 RRKVYADAIARERAEEEAKVAADKAREAAEAAKEFEKQMQKLSEKEAEAASLAEDAQQKA 404
Query: 387 XXXXXXXXG--KKDSTIVDGLPMSGI-SDAQTSTSGVKTGITETVSAPEELSKARPLSP 442
G K I GL + + S T+ V+ +KAR L P
Sbjct: 405 DAVGVTVDGLFNKAKDISSGLSWNKLGSQFATAIQNASETPKVQVATVRGQAKARNLPP 463
>TAIR|locus:2040716 [details] [associations]
symbol:AT2G37660 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0042742
"defense response to bacterium" evidence=IEP;RCA] [GO:0048046
"apoplast" evidence=IDA] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0000272 "polysaccharide catabolic process"
evidence=RCA] [GO:0005982 "starch metabolic process" evidence=RCA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009409 "response
to cold" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
evidence=RCA] InterPro:IPR016040 EMBL:AC004684 GO:GO:0009570
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0048046 GO:GO:0042742 GO:GO:0005507
GO:GO:0009579 eggNOG:COG0702 UniGene:At.26205 UniGene:At.66411
HOGENOM:HOG000262433 EMBL:AY042827 EMBL:AY081456 EMBL:AY085201
IPI:IPI00539231 PIR:T02532 RefSeq:NP_565868.1
ProteinModelPortal:O80934 SMR:O80934 STRING:O80934
SWISS-2DPAGE:O80934 World-2DPAGE:0003:O80934 PaxDb:O80934
PRIDE:O80934 ProMEX:O80934 EnsemblPlants:AT2G37660.1 GeneID:818343
KEGG:ath:AT2G37660 TAIR:At2g37660 InParanoid:O80934 OMA:GTNPNHP
PhylomeDB:O80934 ProtClustDB:CLSN2688756 Genevestigator:O80934
GermOnline:AT2G37660 Uniprot:O80934
Length = 325
Score = 176 (67.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 74/305 (24%), Positives = 134/305 (43%)
Query: 38 SSKKFSHPRKLKLPDFKAQASGTINICSEA--------VGATPTKADSKDDNLAFVAGAT 89
+S S PR L F++ S + +IC + V T + A + + V GA
Sbjct: 27 ASSFVSVPRSSSL-QFRSLVSDSTSICGPSKFTGKNRRVSVTVSAAATTEPLTVLVTGAG 85
Query: 90 GKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQS----VKQMKLDGELAN--KGIQQM 141
G+ G ++L + F R VR+ + E + + ++ +A +GI +
Sbjct: 86 GRTGQIVYKKLKERSEQFVARGLVRTKESKEKINGEDEVFIGDIRDTASIAPAVEGIDAL 145
Query: 142 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 201
+ L + + +P+ G G E D P ++D+ KN +DAA A
Sbjct: 146 VILTSAVPQMKPGFDPSKG---------GRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAG 196
Query: 202 VNHFIMVSSLGTNKFGFPA-AILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTD 260
V ++V S+G P +I N +L+WKRKAE+ L SG+PYTI+R GG++
Sbjct: 197 VKQIVLVGSMGGTNINHPLNSIGNA--NILVWKRKAEQYLADSGIPYTIIRAGGLQDKDG 254
Query: 261 AYKETHNITLSQEDTLFGGQVSNLQVAELL-ACM-AKNRSLSYCKVVEVIAETTAPLTPM 318
+E + + ++D L + + A++ C+ A + K +++ ++ TP
Sbjct: 255 GIRE---LLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGTGTPT 311
Query: 319 EELLA 323
++ A
Sbjct: 312 KDFKA 316
>TAIR|locus:2185228 [details] [associations]
symbol:AT5G02240 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0048046 "apoplast" evidence=IDA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886
GO:GO:0009737 GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046
EMBL:AL162508 eggNOG:COG0702 UniGene:At.21103 HOGENOM:HOG000262433
ProtClustDB:CLSN2688756 EMBL:AY142045 EMBL:BT000751 EMBL:AK221714
EMBL:AF410336 IPI:IPI00530877 PIR:T48245 RefSeq:NP_568098.1
PDB:1XQ6 PDB:1YBM PDB:2Q46 PDB:2Q4B PDBsum:1XQ6 PDBsum:1YBM
PDBsum:2Q46 PDBsum:2Q4B ProteinModelPortal:Q94EG6 SMR:Q94EG6
PaxDb:Q94EG6 PRIDE:Q94EG6 ProMEX:Q94EG6 DNASU:830851
EnsemblPlants:AT5G02240.1 GeneID:830851 KEGG:ath:AT5G02240
TAIR:At5g02240 InParanoid:Q94EG6 OMA:KTGFRIA PhylomeDB:Q94EG6
EvolutionaryTrace:Q94EG6 Genevestigator:Q94EG6 GermOnline:AT5G02240
Uniprot:Q94EG6
Length = 253
Score = 169 (64.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 73/258 (28%), Positives = 113/258 (43%)
Query: 85 VAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMK---LDGELAN--- 135
V GA+G+ G + V + LK G F + VRS Q E + D + N
Sbjct: 9 VTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAF 67
Query: 136 KGIQQMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVD 195
+GI ++ L + + +P G G E D P ++D+ KN +D
Sbjct: 68 QGIDALVILTSAVPKMKPGFDPTKG---------GRPEFIFEDGQYPEQVDWIGQKNQID 118
Query: 196 AATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 255
AA +A V H ++V S+G P L +L+WKRKAE+ L SG PYTI+R GG+
Sbjct: 119 AAKVAGVKHIVVVGSMGGTNPDHPLNKLGN-GNILVWKRKAEQYLADSGTPYTIIRAGGL 177
Query: 256 ERPTDAYKET---HNITLSQEDT--LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE 310
+E + L Q DT + V+ + + LL AKN++ E
Sbjct: 178 LDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE---G 234
Query: 311 TTAPLTPMEELLAKIPSQ 328
T+ P + L +++ S+
Sbjct: 235 TSTPTKDFKALFSQVTSR 252
>TAIR|locus:2180019 [details] [associations]
symbol:PCB2 "PALE-GREEN AND CHLOROPHYLL B REDUCED 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0015995
"chlorophyll biosynthetic process" evidence=RCA;IMP;TAS]
[GO:0051744 "3,8-divinyl protochlorophyllide a 8-vinyl reductase
activity" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0009073 "aromatic amino acid family biosynthetic
process" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016117 "carotenoid biosynthetic process"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0019344
"cysteine biosynthetic process" evidence=RCA] [GO:0030154 "cell
differentiation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR016040
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016020 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0009941 GO:GO:0009534 GO:GO:0015995
eggNOG:COG0702 EMBL:BT025627 IPI:IPI00539374 RefSeq:NP_197367.1
UniGene:At.21772 ProteinModelPortal:Q1H537 SMR:Q1H537 IntAct:Q1H537
STRING:Q1H537 PaxDb:Q1H537 PRIDE:Q1H537 EnsemblPlants:AT5G18660.1
GeneID:831984 KEGG:ath:AT5G18660 TAIR:At5g18660
HOGENOM:HOG000251228 InParanoid:Q1H537 OMA:ICVQKPL PhylomeDB:Q1H537
ProtClustDB:PLN02657 Genevestigator:Q1H537 GO:GO:0051744
Uniprot:Q1H537
Length = 417
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 96/353 (27%), Positives = 153/353 (43%)
Query: 1 MEICSLQSQTLSTIPSP--LSRNGLIVKSFGSCQILKFPSSKKF-----SHPRKLKLPDF 53
M +CS + S P P + ++ + F Q+ P + F S K K
Sbjct: 1 MSLCSSFNVFASYSPKPKTIFKDSKFISQF---QVKSSPLASTFHTNESSTSLKYKRARL 57
Query: 54 KAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113
K +S I A + KD N+ V G+TG +G V+E++K GF V A R
Sbjct: 58 KPISSLDSGISEIATSPSFRNKSPKDINV-LVVGSTGYIGRFVVKEMIKRGFNVIAVARE 116
Query: 114 VQ--RAEN-LVQSVKQMKLDGELANKGIQQMLELVECDLEKRVQIEPALG-NASVVICCI 169
R +N +++KQ L G AN + EL LEK ++ LG VV+ C+
Sbjct: 117 KSGIRGKNDKEETLKQ--LQG--ANVCFSDVTELDV--LEKSIE---NLGFGVDVVVSCL 167
Query: 170 GASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK--FGFPAAILNLFW 227
+ + D ++ID++ATKN + A HF+++S++ K F A L F
Sbjct: 168 ASRNGGIKD---SWKIDYEATKNSLVAGKKFGAKHFVLLSAICVQKPLLEFQRAKLK-FE 223
Query: 228 GVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG-GQVSNLQ- 285
L+ + ++ S Y+IVRP + E + + +FG G++ +
Sbjct: 224 AELMDLAEQQD----SSFTYSIVRPTAFFKSLGGQVEI--VKDGKPYVMFGDGKLCACKP 277
Query: 286 VAEL-LACMAKNRSLSYCKVVEV--IAETTAPLTPME--ELLAKIPSQRAEPK 333
++E LA + L K+ +V I LTP+E E+L KI + EPK
Sbjct: 278 ISEQDLAAFIADCVLEENKINQVLPIGGPGKALTPLEQGEILFKILGR--EPK 328
>UNIPROTKB|Q71X34 [details] [associations]
symbol:LMOf2365_2365 "Putative uncharacterized protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE017262 GenomeReviews:AE017262_GR eggNOG:COG0702 OMA:NFRAVEL
HOGENOM:HOG000262434 RefSeq:YP_014954.1 ProteinModelPortal:Q71X34
STRING:Q71X34 GeneID:2797166 KEGG:lmf:LMOf2365_2365 PATRIC:20326096
ProtClustDB:CLSK564896 Uniprot:Q71X34
Length = 209
Score = 87 (35.7 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 185 IDFQATKNLVDAATIAKVNHFIMVSSLGT-NKFGFPAAILNLFWGVLLWKRKAEEALIAS 243
ID ++ A V FI+VSS G N P ++++ L K+ A+E L S
Sbjct: 85 IDQNGAIKAIETAKEKGVRRFIIVSSYGADNPENGPESLIHY----LKAKQAADEELKRS 140
Query: 244 GLPYTIVRPGGM 255
GL YTIVRP G+
Sbjct: 141 GLDYTIVRPVGL 152
Score = 65 (27.9 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 85 VAGATGKVGSRTVREL-LKLGFRVRAGVRSVQRAENL 120
V GA GK+G V +L ++ GF VRA VR ++ L
Sbjct: 5 VIGANGKIGRLLVEKLAMEKGFFVRAMVRKAEQVSEL 41
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.129 0.358 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 528 493 0.00083 119 3 11 23 0.46 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 607 (65 KB)
Total size of DFA: 247 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.22u 0.10s 46.32t Elapsed: 00:00:02
Total cpu time: 46.23u 0.10s 46.33t Elapsed: 00:00:02
Start: Fri May 10 21:23:33 2013 End: Fri May 10 21:23:35 2013