Citrus Sinensis ID: 009694

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------53
MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQQMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEVASQLTGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPSPKKY
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccHHHHHccccEEEEcccccccccccccccCECcHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccEEEccccccccccccHHHHHHHHHHHHHccccccccEEEEEcccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
********************NGLIVKSFGSCQILKF********************************************NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQQMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIP**********************************************LSPYTSYE********************************************************************************************************************************YHMYEDLK************
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MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQQMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEVASQLTGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPSPKKY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein TIC 62, chloroplastic Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Acts as a membrane anchor of LFNR1 and LFNR2. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.probableQ8H0U5
Protein TIC 62, chloroplastic Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.probableQ8SKU2

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1XQ6, chain A
Confidence level:very confident
Coverage over the Query: 79-120,139-328
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Template: 3RUF, chain A
Confidence level:confident
Coverage over the Query: 78-330
View the alignment between query and template
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Template: 3MHP, chain C
Confidence level:confident
Coverage over the Query: 435-460
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View the model in PyMOL
Template: 3MHP, chain C
Confidence level:confident
Coverage over the Query: 502-526
View the alignment between query and template
View the model in PyMOL