BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009695
(528 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 216/454 (47%), Gaps = 56/454 (12%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS-GSI 80
D++V +R++CP VVGG+IG+SG +I++IR +TK +I G RVI + S
Sbjct: 33 DELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEK 92
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAE--VEGDGDGDDVAYCGLLANTT 138
I F ++ E + Q+A+++V++ + + E + + D DD C LL +
Sbjct: 93 QEEIGFTKS----ENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFS 148
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVML------PPPACAAIDDQLIQITGATLAVKKALV 192
+ ++GK G N+ R+R + A + ++ P CA D ++ I+G +VK+AL
Sbjct: 149 QSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALF 208
Query: 193 AVTTCLQHLSTMEKSPI---CFNRPIEKVF----YSNSSDPHREFFPHLS-LVPPLTGNP 244
AV+ + ++ E P+ + P V SNS P F+ + ++ G P
Sbjct: 209 AVSAIMYKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVP 268
Query: 245 SD----NASEFHSSSADADRDHP----------GLDKKGRKQEVALRMLFSGWTASGIIG 290
S + S+F + A P G R +E+ ++L +IG
Sbjct: 269 SYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCPLCNIMRVIG 328
Query: 291 KRGAIVRSLQNASGALISFAAPLTKSG--ERVVTISALEYLDTRHSPVQNAAVLVFARSV 348
K G+ ++ ++ ASG+ I TK G E V+ ++A E D S A +L+
Sbjct: 329 KGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLL----- 383
Query: 349 EVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVL 408
Q + + E+ + V + +LV + +GC+ G S ++E+ T +I + G++
Sbjct: 384 -----QEYINDED-AENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK-- 435
Query: 409 GCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
D ++++SGE +V++AL ++V RLR ++
Sbjct: 436 ------DDLVEVSGEVSSVRDALIQIVLRLREDV 463
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 131/323 (40%), Gaps = 48/323 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFP--GSDHRVILVVGSGSIDRRI 84
F+++CP + +IG+ GS I IR + I G D VI+V + S D
Sbjct: 314 FKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDM- 372
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
S EAV+ + E + D D ++V LL ++ IG V+
Sbjct: 373 -------------KSMAVEAVLLLQEYI--------NDEDAENVKM-QLLVSSKVIGCVI 410
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK G + +R + A I + D L++++G +V+ AL+ + L+
Sbjct: 411 GKSGSVINEIRKRTNANICI-----SKGKKDDLVEVSGEVSSVRDALIQIVLRLREDVLG 465
Query: 205 EKSPICFNRPIEKV----FYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADR 260
+K + +P + F S SS+ +S + +G FH +
Sbjct: 466 DKDSVATRKPPARTDNCSFLSGSSNAGYTLPSFMSSMASTSG--------FHGYGSFPAG 517
Query: 261 DH----PGLDKKGR-KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTK 315
D+ G GR AL +L S ++GK G + +++ SGA+I +A T
Sbjct: 518 DNVLGSTGPYSYGRLPSSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTS 577
Query: 316 SGERVVTIS-ALEYLDTRHSPVQ 337
G+ + +S LE + + VQ
Sbjct: 578 HGDHIALLSGTLEQMRCAENLVQ 600
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI-- 323
DK R + V R+L G+IGK G ++ ++++ + A I L +RV+TI
Sbjct: 28 DKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYC 87
Query: 324 ------SALEYLDTRHSPV---QNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGA 374
+ + + + P+ Q+A + V+ V + + + ++ D +LV
Sbjct: 88 SVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPF 147
Query: 375 DFVGCLTGSGSSAVSEMEDVTGTDIKLVG---GEQVLGCAAQNDVVIQISGEYKNVQNAL 431
L G + + T +K+V + CA + D V+ ISGE ++V+ AL
Sbjct: 148 SQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQAL 207
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 166/415 (40%), Gaps = 85/415 (20%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 244
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 245 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 292
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 293 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 344
Query: 207 SPICFNRPIEKVF----YSNSSDPHREF--FPHLSLVPPLTGNPSDNASEFHSSSADADR 260
F + V Y +S PH +F FPH P
Sbjct: 345 LREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYP---------------------- 382
Query: 261 DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGER 319
+QE+ + + IIGK+GA ++ L +GA I A A ER
Sbjct: 383 ----------EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSER 431
Query: 320 VVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGC 379
+V I+ + A +F + E + F+ E + I V + G
Sbjct: 432 MVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAHIRVPSSTAGR 480
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEV 434
+ G G V+E++++T ++ +V +Q +V+++I G + Q A ++
Sbjct: 481 VIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQTAQRKI 532
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 14 RRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
R+ PL P +VV +++ P+ G +IG+ G I ++++T I
Sbjct: 9 RKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 68
Query: 61 EGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
+PG+ RV LV G+ + + V E + + T+ V+ + + +
Sbjct: 69 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM-- 125
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
+ D L+ + G+++GKGG V + +SGA + + P + +++
Sbjct: 126 ------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV 179
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
+ ++G V KA+ A+ +Q + +S C N + Y+N + P
Sbjct: 180 VTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN-----ISYANVAGP 220
Score = 40.0 bits (92), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 27/196 (13%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVTISA 325
G + E L++L + A IIGK G + LQ +GA I + + ERV +
Sbjct: 28 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG 87
Query: 326 L-EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE-----------NKGDAVAVSILVG 373
E L+ HS A V E Q + E N A ++V
Sbjct: 88 TAEALNAVHS--------FIAEKVR-EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVP 138
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSE 433
G + G G + V + + +G ++L ++ G Q VV +SGE + V A+S
Sbjct: 139 NSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHKAVSA 195
Query: 434 VVGRLRHNLKSGEILN 449
+V +++ + +S LN
Sbjct: 196 IVQKVQEDPQSSSCLN 211
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 50 NSNDYGYGGQKR-PLEDGDQPDAKKVPPQNDSFGAQLPPMHQQQRSVMTEEYKVPDGMVG 108
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 109 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 150
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 151 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 206
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 207 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 242
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 174/435 (40%), Gaps = 65/435 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HR---KENSGAAEKPVTI 237
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + ++V +LA+ +G ++GK
Sbjct: 238 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEVP-LKILAHNGFVGRLIGK 285
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ V+ + A + M+K
Sbjct: 286 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVRGTIEACANA--EIEIMKK 337
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP G +P S
Sbjct: 338 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSG 397
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 398 YFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 457
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 458 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 506
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KN 426
I V + G + G G V+E++++T ++ +V +Q +V+++I G + +
Sbjct: 507 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 563
Query: 427 VQNALSEVVGRLRHN 441
Q + E+V +++
Sbjct: 564 AQRKIREIVQQVKQQ 578
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 15/183 (8%)
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTK-SGERVV 321
PG + R+ + LR+L IIGK G ++++ + + + + E+ V
Sbjct: 176 PGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPV 235
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
TI A +P + A + +E Q + + V + IL FVG L
Sbjct: 236 TIHA--------TPEGTSE----ACRMILEIMQKEADETKLAEEVPLKILAHNGFVGRLI 283
Query: 382 GSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
G + ++E TGT I + + + + I + G + NA E++ +LR
Sbjct: 284 GKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLREA 341
Query: 442 LKS 444
++
Sbjct: 342 FEN 344
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 53/217 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD------------------------DVVSFRLVCPTPVV 36
+SN YGY ++R PL + PD V++ P +V
Sbjct: 50 NSNDYGYGGQKR-PLEDGDQPDAKKVPPQNDSFGAQLPPMHQQQSRSVMTEEYKVPDGMV 108
Query: 37 GGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVV 93
G +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 109 GFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE-------------- 151
Query: 94 EGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTR 153
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + +
Sbjct: 152 ---SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQ 206
Query: 154 MRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
++ +G K+VM+ D+ ++ITG V++A
Sbjct: 207 LQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 243
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 53/217 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD------------------------DVVSFRLVCPTPVV 36
+SN YGY ++R PL + PD V++ P +V
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGMV 112
Query: 37 GGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVV 93
G +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 GFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE-------------- 155
Query: 94 EGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTR 153
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + +
Sbjct: 156 ---SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQ 210
Query: 154 MRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
++ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 LQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 247
>sp|Q756R8|HEK2_ASHGO Heterogeneous nuclear rnp K-like protein 2 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=HEK2 PE=3 SV=1
Length = 316
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 43/262 (16%)
Query: 143 VVGKGGRNVTRMRIESGAKI-VMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
++G+GG + +R +G KI + +C+ D+L+++TG+ AV +L V L
Sbjct: 47 ILGRGGNTIDNIRKANGVKIGISTKEKSCS---DRLLEVTGSIDAVANSLADVVKVLTAD 103
Query: 202 STMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLV-PPLTGNPSDNASEFHSSSADADR 260
T E+ +P + F HL+ + PP PS + +E
Sbjct: 104 DTNEEDA--------------EPEPEQHIFKHLNFILPP----PSPDEAE---------- 135
Query: 261 DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNA-SGALISFAAPLTKSGER 319
D KQ LR++ + S IIG G+ ++ L + S L+ L S +R
Sbjct: 136 -----DPMKVKQIGNLRLIVTNSQVSSIIGTAGSKIKKLIDTHSSKLVVSKTFLPDSQDR 190
Query: 320 VVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGF--SSGENKGDAVAVSILVGADFV 377
++ I + ++ + +++ + + V ++ + S +K V ++ + A++V
Sbjct: 191 ILEIQG--FPNSIANCIKDISQTLIKDDVLDTKEKRYYPHSKHSKDIHVTATVAIPAEYV 248
Query: 378 GCLTGSGSSAVSEMEDVTGTDI 399
G L G G + ++ + T T I
Sbjct: 249 GALLGHGGNRIANLRKYTRTKI 270
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 88/443 (19%), Positives = 178/443 (40%), Gaps = 75/443 (16%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
++ P+++P RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 190 KQQPVDIP-----LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR--- 233
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
+G+ ++ I + ST E + + E+ + D D +
Sbjct: 234 KENAGAAEKAI------------SIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKI 281
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
LA+ +G ++GK GRN+ ++ ++ KI + +++ D + T+ VK ++
Sbjct: 282 LAHNNFVGRLIGKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGSI-- 333
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE-----FFPHLS-LVPPLTGNPSDN 247
C M+K + + + + P FP S VPP + S
Sbjct: 334 ENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGA 393
Query: 248 ASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALI 307
A +SS +++ + + IIGK+G ++ L + A I
Sbjct: 394 AP--YSSFMPPEQE-------------TVHVFIPAQAVGAIIGKKGQHIKQLSRFASASI 438
Query: 308 SFAAPLTKSGE-RVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAV 366
A P T + R+V I+ + A ++ + E + F G + +
Sbjct: 439 KIAPPETPDSKVRMVVITGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKL 487
Query: 367 AVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY-- 424
I V A G + G G V+E++++T ++ +V +Q Q V+++I G +
Sbjct: 488 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPDENEQ--VIVKIIGHFYA 544
Query: 425 -KNVQNALSEVVGRLRHNLKSGE 446
+ Q + +++ +++ + G+
Sbjct: 545 SQMAQRKIRDILAQVKQQHQKGQ 567
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/427 (19%), Positives = 169/427 (39%), Gaps = 62/427 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 199 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKPI 247
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ ST E + E+ + D D +LA+ +G ++
Sbjct: 248 ------------SIHSTPEGCSAACRMILEIMNQEAKDTKTADEVPLKVLAHNNFVGRLI 295
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + P + D + T+ VK ++ A CL M
Sbjct: 296 GKEGRNLKKVEQDTDTKITISP------LQDLTLYNPERTITVKGSIEAC--CLAEQEIM 347
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSL--VPPLTGNPSDNASEFHSSSADADRDH 262
+K ++ I + + P L+L + + + +S
Sbjct: 348 KKVREAYDNDIAAM------NQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSVPG----- 396
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGERVV 321
P G ++ + + +IGK+G ++ L +GA I A A S R+V
Sbjct: 397 PPYGPMGASEQETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMV 456
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
++ + A ++ + E + F G + + I V A G +
Sbjct: 457 IVTGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIKVAAAAAGRVI 505
Query: 382 GSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KNVQNALSEVVGRL 438
G G V+E++++T ++ +V EQ + V+++I G + + Q + +++ ++
Sbjct: 506 GKGGKTVNELQNLTAAEV-VVPREQT--PDEHDQVIVKIIGHFYASQLAQRKIRDILTQV 562
Query: 439 RHNLKSG 445
+ K G
Sbjct: 563 KQQQKGG 569
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 77/188 (40%), Gaps = 31/188 (16%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G+ K + ++ LR+L IIGK GA +R++ + + I R
Sbjct: 189 GIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HRKENA 240
Query: 324 SALEYLDTRHSPVQ--NAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
A E + HS + +AA + +E+ Q+ + D V + +L +FVG L
Sbjct: 241 GAAEKPISIHSTPEGCSAACRMI---LEIMNQEAKDT--KTADEVPLKVLAHNNFVGRLI 295
Query: 382 GSGSSAVSEMEDVTGT--------DIKLVGGEQVLG--------CAAQNDVVIQISGEYK 425
G + ++E T T D+ L E+ + C A+ +++ ++ Y
Sbjct: 296 GKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSIEACCLAEQEIMKKVREAYD 355
Query: 426 NVQNALSE 433
N A+++
Sbjct: 356 NDIAAMNQ 363
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 179/443 (40%), Gaps = 78/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSITIL------------STPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 385 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 438 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 485
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 486 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 540
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 541 GHFYACQVAQRKIQEILTQVKQH 563
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 172/424 (40%), Gaps = 59/424 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V RL+ PT VG +IG+ G+ I +I + T +I HR +G+ ++ I
Sbjct: 195 VPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDI--------HR---KENAGAAEKPI 243
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + E+ + D + +LA+ +G ++
Sbjct: 244 T------------VHSTPEGCSSACRNIMEIMQKEAIDTKITEEIPLKILAHNNFVGRLI 291
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + P + D + T+ VK L A + + M
Sbjct: 292 GKEGRNLKKIEQDTDTKITISP------LQDLTLYNPERTITVKGTLDACAKAEEEI--M 343
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVP-PLTGNPSDNASEFHSSSADADRDHP 263
+K + + + ++ P L L P +G S + A A
Sbjct: 344 KKVRESYENDVAAMHLQSNLIPGLNLN-ALGLFPGAASGGISPSVVSGPPPGAQA----- 397
Query: 264 GLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQNASGALISFA-APLTKSGERVV 321
G G + E LF A G IIGK+G ++ L +GA I A A + +R+V
Sbjct: 398 GYQSFGAQMESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGIDAKQRMV 457
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
IS + A +F + E + F G + + I V + G +
Sbjct: 458 IISGPPEAQFK------AQGRIFGKLKE----ENF-FGPKEEVKLEAHIKVPSFAAGRVI 506
Query: 382 GSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGR 437
G G V+E++++T ++ +V +Q +ND VV++I+G + + Q + E++ +
Sbjct: 507 GKGGKTVNELQNLTSAEV-VVPRDQ---TPDENDQVVVKITGHFYASQLAQRKIQEIISQ 562
Query: 438 LRHN 441
+R
Sbjct: 563 VRRQ 566
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 89/438 (20%), Positives = 178/438 (40%), Gaps = 64/438 (14%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
++ P+++P RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 190 KQQPVDIP-----LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR--- 233
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
+G+ ++ I V ST E + + E+ + D D +
Sbjct: 234 KENAGAAEKAI------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKI 281
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
LA+ +G ++GK GRN+ ++ ++ KI + +++ D + T+ VK A+
Sbjct: 282 LAHNNFVGRLIGKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI-- 333
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHS 253
C M+K + E + S H P L+L G ++S
Sbjct: 334 ENCCRAEQEIMKKVREAY----ENDVAAMSLQSH--LIPGLNLA--AVGLFPASSSAVPP 385
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
+ P ++ +++ IIGK+G ++ L + A I A P
Sbjct: 386 PPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE 445
Query: 314 TKSGE-RVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILV 372
T + R+V I+ + A ++ + E + F G + + I V
Sbjct: 446 TPDSKVRMVVITGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRV 494
Query: 373 GADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQ 428
A G + G G V+E++++T ++ +V +Q +ND V+++I G + + Q
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQ 550
Query: 429 NALSEVVGRLRHNLKSGE 446
+ +++ +++ + G+
Sbjct: 551 RKIRDILAQVKQQHQKGQ 568
Score = 32.7 bits (73), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 27/185 (14%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G K + ++ LR+L IIGK GA +R++ + + I R
Sbjct: 186 GAPAKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HRKENA 237
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
A E + HS + + A + +E + D V + IL +FVG L G
Sbjct: 238 GAAEKAISVHSTPEGCSS---ACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGK 294
Query: 384 GSSAVSEMEDVTGT--------DIKLVGGEQVLG--------CAAQNDVVIQISGEYKNV 427
+ ++E T T D+ L E+ + C A+ +++ ++ Y+N
Sbjct: 295 EGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYEND 354
Query: 428 QNALS 432
A+S
Sbjct: 355 VAAMS 359
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 181/436 (41%), Gaps = 62/436 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHP- 263
+K + E + S H P L+L G ++S + P
Sbjct: 345 KKVREAY----ENDVAAMSLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 396
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGE-RVVT 322
G + +QE+ +++ IIGK+G ++ L + A I A P T + R+V
Sbjct: 397 GSFMQAPEQEM-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV 455
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
I+ + A ++ + E + F G + + I V A G + G
Sbjct: 456 ITGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIG 504
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRL 438
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ ++
Sbjct: 505 KGGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQV 560
Query: 439 RHNLKSGEILNEARPR 454
+ + G+ N+A+ R
Sbjct: 561 KQQHQKGQ-SNQAQAR 575
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 73/185 (39%), Gaps = 27/185 (14%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G K ++ ++ LR+L IIGK GA +R++ + + I R
Sbjct: 186 GAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HRKENA 237
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
A E + HS + + A + +E + D V + IL +FVG L G
Sbjct: 238 GAAEKAISVHSTPEGCSS---ACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGK 294
Query: 384 GSSAVSEMEDVTGT--------DIKLVGGEQVLG--------CAAQNDVVIQISGEYKNV 427
+ ++E T T D+ L E+ + C A+ +++ ++ Y+N
Sbjct: 295 EGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYEND 354
Query: 428 QNALS 432
A+S
Sbjct: 355 VAAMS 359
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + E + S H P L+L G ++S + P
Sbjct: 345 KKVREAY----ENDVAAMSLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGE-RVVTI 323
++ +++ IIGK+G ++ L + A I A P T + R+V I
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 456
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 457 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 505
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 506 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 561
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 562 QQHQKGQ-SNQAQAR 575
Score = 33.5 bits (75), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 73/185 (39%), Gaps = 27/185 (14%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G K ++ ++ LR+L IIGK GA +R++ + + I R
Sbjct: 186 GAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HRKENA 237
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
A E + HS + + A + +E + D V + IL +FVG L G
Sbjct: 238 GAAEKAISVHSTPEGCSS---ACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGK 294
Query: 384 GSSAVSEMEDVTGT--------DIKLVGGEQVLG--------CAAQNDVVIQISGEYKNV 427
+ ++E T T D+ L E+ + C A+ +++ ++ Y+N
Sbjct: 295 EGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYEND 354
Query: 428 QNALS 432
A+S
Sbjct: 355 VAAMS 359
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 37/197 (18%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + E R+ ++ V+
Sbjct: 111 IQIASESSGIPERPCVLTGT---------------------PESIEQAKRLLGQI--VDR 147
Query: 118 EVEGDGDGDDV----AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAI 173
G G +D+ +L +K+G+V+G+GG + +++ +G K+VM+
Sbjct: 148 CRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTG 207
Query: 174 DDQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 208 ADKPLRITGDAFKVQQA 224
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
+++++ E + V G ++ Y K G+V+G
Sbjct: 315 HIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPP 396
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 24/190 (12%)
Query: 16 GPLNLP--DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCE---GGFPGSDHR 70
GP++ P V+ P +VG +IGR G I+ I++D+ C++ GG P R
Sbjct: 198 GPMHPPPRSTTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP---ER 254
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+ + GS ++ +D+V G Q +G +
Sbjct: 255 SVSLTGSPEAVQKAKLMLDDIVSRGRGGPPGQ----------------FHDYANGQNGTV 298
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
++ K G+V+GKGG + +++ +G K++ + + D+ ++I G V++A
Sbjct: 299 QEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIFIQDGSQNTNVDKPLRIIGDPYKVQQA 358
Query: 191 LVAVTTCLQH 200
V L+
Sbjct: 359 CEMVMDILRE 368
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
S +D D D P +V LRML AS I+G +GA + +++ + A I+ + +
Sbjct: 51 SHSDNDHDSPD----NVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNI 106
Query: 314 TKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI--L 371
ER+V Y+ V A ++ +E G E+ G+ + +SI L
Sbjct: 107 RGVPERIV------YVRGTCDDVAKAYGMIVRALLEEHG------NEDNGEDIEISINLL 154
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG 422
+ +GC+ G S + E+ED++ + Q+L ND ++ I+G
Sbjct: 155 IPHHLMGCIIGKRGSRLREIEDLSAAKL-FASPNQLL---LSNDRILTING 201
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 148/380 (38%), Gaps = 81/380 (21%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV 75
P N+P DV R++C ++G G+ IS I+ +T RI+ G R++ V
Sbjct: 59 SPDNVPSDV-HLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVR 117
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD-GDDVAY-CGL 133
G+ C+ +V+ ++R E G+ D G+D+ L
Sbjct: 118 GT---------CD--------DVAKAYGMIVRAL-------LEEHGNEDNGEDIEISINL 153
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
L +G ++GK G + + S AK+ P + +D+++ I G A+ A
Sbjct: 154 LIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLS-NDRILTINGVPDAIHIATFY 212
Query: 194 VTTCLQHLS----------TMEKSPICFNRPI------EKVFYSNS-----SDPHREFFP 232
++ L + ++ P FN + +F+ + SD + P
Sbjct: 213 ISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQPNTIFHQRNHQYHPSDKLLSYKP 272
Query: 233 HLSL----------VPPLTGNPSDNASEFHSSSADAD---------RDHPG--LDKKGRK 271
+ +L P T NA+ F + + PG L +
Sbjct: 273 NKNLPISSTLLSMATPQYTTASVANATAFQPNFVIPNVTVLDGPVISPAPGNHLLMNFVQ 332
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
QE+ + F G +IGK G + S++ ++G I P+ S ER +TI ++ +
Sbjct: 333 QEIFIDEKFVG----NVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRG-TFMAS 387
Query: 332 RHSPVQNAAVLVFARSVEVE 351
+ AA+++ + +E++
Sbjct: 388 Q------AAIMLISNKIEID 401
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 104/256 (40%), Gaps = 48/256 (18%)
Query: 7 PYGYSSKRRGPLNLPDDVVSF-RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-- 63
P S+KR N +D F +++ P+ G +IG+ G I ++++T I
Sbjct: 34 PEAGSTKRT---NTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 90
Query: 64 -FPGSDHRVILVVGS--------GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE 114
+PG+ RV L+ G+ G I +I +V + + + +
Sbjct: 91 FYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVA---------KTEPVSILQPQTT 141
Query: 115 VEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAID 174
V + D + ++ + G+++GKGG V + +SGA + + P +
Sbjct: 142 V--------NPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQ 193
Query: 175 DQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHL 234
++++ ++G +K AV +Q + +S C N + Y+N + P P
Sbjct: 194 ERVVTVSGEPEQNRK---AVELIIQKIQEDPQSGSCLN-----ISYANVTGPVANSNP-- 243
Query: 235 SLVPPLTGNPSDNASE 250
TG+P N +E
Sbjct: 244 ------TGSPYANTAE 253
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 29/197 (14%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVTISA 325
G + L++L + A IIGK G + LQ +GA I + + ERV I
Sbjct: 45 GEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 104
Query: 326 -LEYLDTRHSPV--------QNAA----VLVFARSVEVEGQQGFSSGENKGDAVAVSILV 372
+E L+ H + QN A V + V N V I+V
Sbjct: 105 TVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTV----------NPDRIKQVKIIV 154
Query: 373 GADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALS 432
G + G G + V + + +G ++L ++ G Q VV +SGE + + A+
Sbjct: 155 PNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVT-VSGEPEQNRKAVE 211
Query: 433 EVVGRLRHNLKSGEILN 449
++ +++ + +SG LN
Sbjct: 212 LIIQKIQEDPQSGSCLN 228
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I ST E + + E+ + D +
Sbjct: 234 ---KENTGAAEKSITIL------------STPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP 166
+LA+ +G ++GK GRN+ ++ ++ KI + P
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP 314
Score = 32.3 bits (72), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 15/183 (8%)
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISF-AAPLTKSGERVV 321
PG K + ++ LR+L IIGK GA +R++ + + I T + E+ +
Sbjct: 185 PGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSI 244
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
TI L T +AA + E Q + E + + IL +FVG L
Sbjct: 245 TI-----LSTPEG--TSAACKSILEIMHKEAQDIKFTEE-----IPLKILAHNNFVGRLI 292
Query: 382 GSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
G + ++E T T I + +++ + I + G + A E++ ++R +
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRES 350
Query: 442 LKS 444
++
Sbjct: 351 YEN 353
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 29/149 (19%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P V R++ PT VG +IG+ G+ I +I + T+ +I HR +G+
Sbjct: 201 PQSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI--------HR---KENAGAA 249
Query: 81 DRRIMFCENDVVVEGGEVSSTQE---AVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANT 137
++ I + ST E A ++ + + EA+ D + +LA+
Sbjct: 250 EKPIT------------IHSTPEGCSAACKIIMEIMQKEAQ---DTKFTEEIPLKILAHN 294
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLP 166
+G ++GK GRN+ ++ ++ KI + P
Sbjct: 295 NFVGRLIGKEGRNLKKIEQDTDTKITISP 323
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 29/149 (19%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P V R++ PT VG +IG+ G+ I +I + T+ +I HR +G+
Sbjct: 202 PQTEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI--------HR---KENAGAA 250
Query: 81 DRRIMFCENDVVVEGGEVSSTQE---AVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANT 137
++ I + ST E A ++ + + EA+ D + +LA+
Sbjct: 251 EKPIT------------IHSTPEGCSAACKIIMEIMQKEAQ---DTKFTEEIPLKILAHN 295
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLP 166
+G ++GK GRN+ ++ ++ KI + P
Sbjct: 296 NFVGRLIGKEGRNLKKIEQDTDTKITISP 324
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 105/249 (42%), Gaps = 34/249 (13%)
Query: 7 PYGYSSKRRGPLNLPDDVVSF-RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-- 63
P S+KR N +D F +++ P+ G +IG+ G I ++++T I
Sbjct: 33 PEAGSTKRT---NTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 89
Query: 64 -FPGSDHRVILVVGS-GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG 121
+PG+ RV L+ G+ +++ F + V+ T+ + + + V
Sbjct: 90 FYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEP--VSILQPQTTV------ 141
Query: 122 DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQIT 181
+ D + ++ + G+++GKGG V + +SGA + + P + ++++ ++
Sbjct: 142 --NPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVS 199
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLT 241
G +K AV +Q + +S C N + Y+N + P P T
Sbjct: 200 GEPEQNRK---AVELIIQKIQEDPQSGSCLN-----ISYANVTGPVANSNP--------T 243
Query: 242 GNPSDNASE 250
G P N +E
Sbjct: 244 GFPYANTAE 252
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 29/197 (14%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVTISA 325
G + L++L + A IIGK G + LQ +GA I + + ERV I
Sbjct: 44 GEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 103
Query: 326 -LEYLDTRHSPV--------QNAA----VLVFARSVEVEGQQGFSSGENKGDAVAVSILV 372
+E L+ H + QN A V + V N V I+V
Sbjct: 104 TIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTV----------NPDRIKQVKIIV 153
Query: 373 GADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALS 432
G + G G + V + + +G ++L ++ G Q VV +SGE + + A+
Sbjct: 154 PNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVT-VSGEPEQNRKAVE 210
Query: 433 EVVGRLRHNLKSGEILN 449
++ +++ + +SG LN
Sbjct: 211 LIIQKIQEDPQSGSCLN 227
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 133/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 148
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 149 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 196 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 255
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SSG + + + + D +GC+ G +
Sbjct: 256 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 315
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 316 INEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 361
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-FPGSDHRVILVVGS 77
V+ RLV P G LIG+ GS I IR T ++ G P S R + + G+
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 33.1 bits (74), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS 77
+ L P ++G +IGR G+ I+ IR+ + +I GS R I + G+
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGT 346
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P V R++ PT VG +IG+ G+ I +I + T+ +I HR +G+
Sbjct: 193 PQSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI--------HR---KENAGAA 241
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
++ I + ST E + + E+ + D + +LA+ +
Sbjct: 242 EKPIT------------IHSTPEGCSTACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFV 289
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP 166
G ++GK GRN+ ++ ++ KI + P
Sbjct: 290 GRLIGKEGRNLKKIEQDTDTKITISP 315
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 133/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 148
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 149 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 196 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 255
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SSG + + + + D +GC+ G +
Sbjct: 256 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 315
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 316 INEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 361
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-FPGSDHRVILVVGS 77
V+ RLV P G LIG+ GS I IR T ++ G P S R + + G+
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS 77
+ L P ++G +IGR G+ I+ IR+ + +I GS R I + G+
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGT 346
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 244
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 245 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 292
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 293 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 344
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 345 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSG 404
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 405 YFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 464
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 465 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 513
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 514 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 570
Query: 430 ALSEV 434
A ++
Sbjct: 571 AQRKI 575
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 12 SKRRGPLNLPDDV-VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGS 67
S + GP++ P ++ P +VG +IGR G I+ I++D+ C++ GG P
Sbjct: 131 SSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-- 188
Query: 68 DHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDD 127
R + + G+ ++ +D+V G Q G G +
Sbjct: 189 -ERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQ------------FHDNANG---GQN 232
Query: 128 VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAV 187
++ K G+V+GKGG + +++ +G K++++ + D+ ++I G V
Sbjct: 233 GTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKV 292
Query: 188 KKALVAVTTCLQH 200
++A V L+
Sbjct: 293 QQACEMVMDILRE 305
>sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus
GN=Khsrp PE=1 SV=1
Length = 721
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 16 GPLNLPDDV-VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRV 71
GP++ P ++ P +VG +IGR G I+ I++D+ C++ GG P R
Sbjct: 136 GPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP---ERS 192
Query: 72 ILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC 131
+ + G+ ++ +D+V G Q G G +
Sbjct: 193 VSLTGAPESVQKAKMMLDDIVSRGRGGPPGQ------------FHDNANG---GQNGTVQ 237
Query: 132 GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKAL 191
++ K G+V+GKGG + +++ +G K++++ + D+ ++I G V++A
Sbjct: 238 EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQAC 297
Query: 192 VAVTTCLQ 199
V L+
Sbjct: 298 EMVMDILR 305
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 16 GPLNLPDDV-VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRV 71
GP++ P ++ P +VG +IGR G I+ I++D+ C++ GG P R
Sbjct: 136 GPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP---ERS 192
Query: 72 ILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC 131
+ + G+ ++ +D+V G Q G G +
Sbjct: 193 VSLTGAPESVQKAKMMLDDIVSRGRGGPPGQ------------FHDNANG---GQNGTVQ 237
Query: 132 GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKAL 191
++ K G+V+GKGG + +++ +G K++++ + D+ ++I G V++A
Sbjct: 238 EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQAC 297
Query: 192 VAVTTCLQ 199
V L+
Sbjct: 298 EMVMDILR 305
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 84/220 (38%), Gaps = 44/220 (20%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-FPGSDHRVILVVGS 77
N+ V+ RLV P G LIG++G+ I IR T ++ G P S R + V G
Sbjct: 96 NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG- 154
Query: 78 GSIDRRIMFCEND---VVVEG-----------------------------GEVSSTQEAV 105
+ I+ C V++E G+ + A
Sbjct: 155 --VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAE 212
Query: 106 IRVFERM------WEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESG 159
+ +++ + + V G G + L IG V+G+ G ++ +R SG
Sbjct: 213 VTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSG 272
Query: 160 AKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
A I + ++ + ITG+ +++ A +T CL+
Sbjct: 273 AHIKIG--NQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Score = 36.6 bits (83), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 18/135 (13%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ LRML G IIGK+G V+ ++ S A I+ + ER+ TI+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-------- 67
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKG-----DAVAVSILVGADFVGCLTGSGSSAV 388
AAV + + + + G V + +++ A G L G + +
Sbjct: 68 ---STAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 389 SEMEDVTGTDIKLVG 403
E+ + TG +++ G
Sbjct: 125 KEIRETTGAQVQVAG 139
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 81/227 (35%), Gaps = 57/227 (25%)
Query: 246 DNASEFHSSSADA---DRDHPGLDKKG---RKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
A+ FH+ S A D D G + V LR++ +IGK G ++ +
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEI 127
Query: 300 QNASGALISFAAP-LTKSGERVVTISALE---YLDTRH-------SPVQNAAVLVFAR-- 346
+ +GA + A L S ER VT+S + L R SP + A +
Sbjct: 128 RETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLS 187
Query: 347 --SVEVEGQQGFSSGENKGDAVAVSI---------------------------------L 371
+V + QGFS G + L
Sbjct: 188 LGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFL 247
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVI 418
V D +GC+ G S +SE+ ++G IK+ G Q G A + V I
Sbjct: 248 VPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GNQAEG-AGERHVTI 291
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G+ + G + +R+L G IIGK+G V+ ++ SGA I+ + ER++T+
Sbjct: 4 GVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITL 61
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA----VAVSILVGADFVGC 379
+ P NA FA ++ + SS N A V + ++V A G
Sbjct: 62 TG---------PT-NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGS 111
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVG 403
L G G + E+ + TG +++ G
Sbjct: 112 LIGKGGCKIKEIRESTGAQVQVAG 135
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 132/355 (37%), Gaps = 91/355 (25%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIH-CEGGFPGSDHRVILVVGSGSIDR 82
++ RL+ VG +IG+ G + IR ++ RI+ EG P R+I + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGP----- 64
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVA-----YCGLLAN 136
A+ + F + + +E ++ A L+
Sbjct: 65 -------------------TNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALV 192
T+ G ++GKGG + +R +GA++ MLP ++ I I G +V + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-----ERAITIAGVPQSVTECVK 160
Query: 193 AVTTCLQHLSTMEKSP-----ICFNRPI---EKVFYSNSSDPHREF--FPHLSLVPPLTG 242
+ CL L T+ +SP +P+ V + D + +PH + L G
Sbjct: 161 QI--CLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH--DLEG 216
Query: 243 NPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRML----FSGWTASG----------- 287
P D A + D L++ R+Q M F+G +S
Sbjct: 217 PPLD-AYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD 275
Query: 288 ------------------IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
IIG++GA + ++ SGA I A P+ S R VTI+
Sbjct: 276 ASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G+ + G + +R+L G IIGK+G V+ ++ SGA I+ + ER++T+
Sbjct: 4 GVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITL 61
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA----VAVSILVGADFVGC 379
+ P NA FA ++ + SS N A V + ++V A G
Sbjct: 62 TG---------PT-NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGS 111
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVG 403
L G G + E+ + TG +++ G
Sbjct: 112 LIGKGGCKIKEIRESTGAQVQVAG 135
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 132/355 (37%), Gaps = 91/355 (25%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIH-CEGGFPGSDHRVILVVGSGSIDR 82
++ RL+ VG +IG+ G + IR ++ RI+ EG P R+I + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGP----- 64
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVA-----YCGLLAN 136
A+ + F + + +E ++ A L+
Sbjct: 65 -------------------TNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALV 192
T+ G ++GKGG + +R +GA++ MLP ++ I I G +V + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-----ERAITIAGVPQSVTECVK 160
Query: 193 AVTTCLQHLSTMEKSP-----ICFNRPI---EKVFYSNSSDPHREF--FPHLSLVPPLTG 242
+ CL L T+ +SP +P+ V + D + +PH + L G
Sbjct: 161 QI--CLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH--DLEG 216
Query: 243 NPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRML----FSGWTASG----------- 287
P D A + D L++ R+Q M F+G +S
Sbjct: 217 PPLD-AYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD 275
Query: 288 ------------------IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
IIG++GA + ++ SGA I A P+ S R VTI+
Sbjct: 276 ASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G+ + G + +R+L G IIGK+G V+ ++ SGA I+ + ER++T+
Sbjct: 4 GVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITL 61
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA----VAVSILVGADFVGC 379
+ P NA FA ++ + SS N A V + ++V A G
Sbjct: 62 TG---------PT-NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGS 111
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVG 403
L G G + E+ + TG +++ G
Sbjct: 112 LIGKGGCKIKEIRESTGAQVQVAG 135
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 132/355 (37%), Gaps = 91/355 (25%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIH-CEGGFPGSDHRVILVVGSGSIDR 82
++ RL+ VG +IG+ G + IR ++ RI+ EG P R+I + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGP----- 64
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVA-----YCGLLAN 136
A+ + F + + +E ++ A L+
Sbjct: 65 -------------------TNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALV 192
T+ G ++GKGG + +R +GA++ MLP ++ I I G +V + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-----ERAITIAGVPQSVTECVK 160
Query: 193 AVTTCLQHLSTMEKSP-----ICFNRPI---EKVFYSNSSDPHREF--FPHLSLVPPLTG 242
+ CL L T+ +SP +P+ V + D + +PH + L G
Sbjct: 161 QI--CLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH--DLEG 216
Query: 243 NPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRML----FSGWTASG----------- 287
P D A + D L++ R+Q M F+G +S
Sbjct: 217 PPLD-AYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD 275
Query: 288 ------------------IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
IIG++GA + ++ SGA I A P+ S R VTI+
Sbjct: 276 ASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G+ + G + +R+L G IIGK+G V+ ++ SGA I+ + ER++T+
Sbjct: 4 GVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITL 61
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA----VAVSILVGADFVGC 379
+ P NA FA ++ + SS N A V + ++V A G
Sbjct: 62 TG---------PT-NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGS 111
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVG 403
L G G + E+ + TG +++ G
Sbjct: 112 LIGKGGCKIKEIRESTGAQVQVAG 135
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 132/355 (37%), Gaps = 91/355 (25%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIH-CEGGFPGSDHRVILVVGSGSIDR 82
++ RL+ VG +IG+ G + IR ++ RI+ EG P R+I + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGP----- 64
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVA-----YCGLLAN 136
A+ + F + + +E ++ A L+
Sbjct: 65 -------------------TNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALV 192
T+ G ++GKGG + +R +GA++ MLP ++ I I G +V + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST-----ERAITIAGVPQSVTECVK 160
Query: 193 AVTTCLQHLSTMEKSP-----ICFNRPI---EKVFYSNSSDPHREF--FPHLSLVPPLTG 242
+ CL L T+ +SP +P+ V + D + +PH + L G
Sbjct: 161 QI--CLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH--DLEG 216
Query: 243 NPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRML----FSGWTASG----------- 287
P D A + D L++ R+Q M F+G +S
Sbjct: 217 PPLD-AYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD 275
Query: 288 ------------------IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
IIG++GA + ++ SGA I A P+ S R VTI+
Sbjct: 276 ASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G+ + G + +R+L G IIGK+G V+ ++ SGA I+ + ER++T+
Sbjct: 4 GVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITL 61
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA----VAVSILVGADFVGC 379
+ NA FA ++ + SS N A V + ++V A G
Sbjct: 62 AG----------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGS 111
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVG 403
L G G + E+ + TG +++ G
Sbjct: 112 LIGKGGCKIKEIRESTGAQVQVAG 135
Score = 39.3 bits (90), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 136/364 (37%), Gaps = 101/364 (27%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIH-CEGGFPGSDHRVILVVGSGSIDR 82
++ RL+ VG +IG+ G + +R ++ RI+ EG P R+I + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGP----- 64
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVA-----YCGLLAN 136
A+ + F + + +E ++ A L+
Sbjct: 65 -------------------TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALV 192
++ G ++GKGG + +R +GA++ MLP ++ I I G ++ + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP-----NSTERAITIAGIPQSIIECVK 160
Query: 193 AVTTCLQHLSTMEKSP----ICFNRPIEK----VF------YSNSSD----PHREFFPHL 234
+ C+ L T+ +SP RP +F YS SD PH P +
Sbjct: 161 QI--CVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTT--PSM 216
Query: 235 SLVPPLTGNPSD-------------NASEFHS---------------------SSADADR 260
L P L G P + + ++ H SS+ +
Sbjct: 217 CLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVK 276
Query: 261 DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERV 320
+ GLD Q + + IIG++GA + ++ SGA I A P+ S +R
Sbjct: 277 GYWGLDASA--QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQ 334
Query: 321 VTIS 324
VTI+
Sbjct: 335 VTIT 338
Score = 35.8 bits (81), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 76/195 (38%), Gaps = 62/195 (31%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G +V +MR ESGA+I + + +++I + G T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGNCPERIITLAGPTNAIFKAFA 73
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFH 252
+ L+ D +S
Sbjct: 74 MIIDKLEE---------------------------------------------DISSSMT 88
Query: 253 SSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP 312
+S+A + + V LR++ +IGK G ++ ++ ++GA + A
Sbjct: 89 NSTAAS------------RPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 313 -LTKSGERVVTISAL 326
L S ER +TI+ +
Sbjct: 137 MLPNSTERAITIAGI 151
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 18 LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS 77
L+ S L P ++G +IGR G+ I+ IR+ + +I GS R + + GS
Sbjct: 281 LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGS 340
Query: 78 GS 79
+
Sbjct: 341 AA 342
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G+ + G + +R+L G IIGK+G V+ ++ SGA I+ + ER++T+
Sbjct: 4 GVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITL 61
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA----VAVSILVGADFVGC 379
+ NA FA ++ + SS N A V + ++V A G
Sbjct: 62 AG----------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGS 111
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVG 403
L G G + E+ + TG +++ G
Sbjct: 112 LIGKGGCKIKEIRESTGAQVQVAG 135
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-FPGSDHRVILVVGSGSIDRR 83
V+ RLV P G LIG+ G I IR T ++ G P S R I + G I +
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAG---IPQS 154
Query: 84 IMFCENDVVV 93
I+ C + V
Sbjct: 155 IIECVKQICV 164
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 127/356 (35%), Gaps = 88/356 (24%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIH-CEGGFPGSDHRVILVVGSGSIDR 82
++ RL+ VG +IG+ G + +R ++ RI+ EG P R+I + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGP----- 64
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVA-----YCGLLAN 136
A+ + F + + +E ++ A L+
Sbjct: 65 -------------------TNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPP-----ACAAIDDQLIQITGATLAV 187
++ G ++GKGG + +R +GA++ MLP A I +I+ V
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVV 165
Query: 188 KKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSD----PHREFFPHLSLVPPLTGN 243
+ + SP+ F ++ YS SD PH P + L P L G
Sbjct: 166 MLESPPKGVTIPYRPKPSSSPVIFAGGQDR--YSTGSDSASFPHTT--PSMCLNPDLEGP 221
Query: 244 PSD-------------NASEFH----------------------SSSADADRDHPGLDKK 268
P + + ++ H SSS + GLD
Sbjct: 222 PLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDAS 281
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
Q + + IIG++GA + ++ SGA I A P+ S +R VTI+
Sbjct: 282 A--QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 335
Score = 35.4 bits (80), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 76/195 (38%), Gaps = 62/195 (31%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G +V +MR ESGA+I + + +++I + G T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGNCPERIITLAGPTNAIFKAFA 73
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFH 252
+ L+ D +S
Sbjct: 74 MIIDKLEE---------------------------------------------DISSSMT 88
Query: 253 SSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP 312
+S+A + + V LR++ +IGK G ++ ++ ++GA + A
Sbjct: 89 NSTAAS------------RPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 136
Query: 313 -LTKSGERVVTISAL 326
L S ER +TI+ +
Sbjct: 137 MLPNSTERAITIAGI 151
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 18 LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS 77
L+ S L P ++G +IGR G+ I+ IR+ + +I GS R + + GS
Sbjct: 278 LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGS 337
Query: 78 GS 79
+
Sbjct: 338 AA 339
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 19/109 (17%)
Query: 113 WEVEAEVEGDGDGDDVAYCGLLAN---------TTKI-------GVVVGKGGRNVTRMRI 156
W++ E +G G G D +Y G + TT++ G ++GKGG+ + ++R
Sbjct: 357 WQMAYEPQG-GSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRH 415
Query: 157 ESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
ESGA I + P +D++I ITG ++ A + ++ + +E
Sbjct: 416 ESGASIKIDEP--LEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVE 462
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 8 YGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
Y Y+ R +L +++ ++ P + G +IG+ G I IR ++ I + GS
Sbjct: 371 YSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS 430
Query: 68 DHRVILVVGS 77
+ R+I + G+
Sbjct: 431 EDRIITITGT 440
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLV- 343
A IIGK G ++ +++ SGA I PL S +R++TI+ + +QNA L+
Sbjct: 399 AGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQ 452
Query: 344 --FARSVEVEG 352
+ +VEG
Sbjct: 453 NSVKQYADVEG 463
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 19/109 (17%)
Query: 113 WEVEAEVEGDGDGDDVAYCGLLAN---------TTKI-------GVVVGKGGRNVTRMRI 156
W++ E +G G G D +Y G + TT++ G ++GKGG+ + ++R
Sbjct: 357 WQMAYEPQG-GSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRH 415
Query: 157 ESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
ESGA I + P +D++I ITG ++ A + ++ + +E
Sbjct: 416 ESGASIKIDEP--LEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVE 462
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 8 YGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
Y Y+ R +L +++ ++ P + G +IG+ G I IR ++ I + GS
Sbjct: 371 YSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS 430
Query: 68 DHRVILVVGS 77
+ R+I + G+
Sbjct: 431 EDRIITITGT 440
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLV- 343
A IIGK G ++ +++ SGA I PL S +R++TI+ + +QNA L+
Sbjct: 399 AGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQ 452
Query: 344 --FARSVEVEG 352
+ +VEG
Sbjct: 453 NSVKQYADVEG 463
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 19/109 (17%)
Query: 113 WEVEAEVEGDGDGDDVAYCGLLAN---------TTKI-------GVVVGKGGRNVTRMRI 156
W++ E +G G G D +Y G + TT++ G ++GKGG+ + ++R
Sbjct: 357 WQMAYEPQG-GSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRH 415
Query: 157 ESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
ESGA I + P +D++I ITG ++ A + ++ + +E
Sbjct: 416 ESGASIKIDEP--LEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVE 462
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 8 YGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
Y Y+ R +L +++ ++ P + G +IG+ G I IR ++ I + GS
Sbjct: 371 YSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS 430
Query: 68 DHRVILVVGS 77
+ R+I + G+
Sbjct: 431 EDRIITITGT 440
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLV- 343
A IIGK G ++ +++ SGA I PL S +R++TI+ + +QNA L+
Sbjct: 399 AGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQ 452
Query: 344 --FARSVEVEG 352
+ +VEG
Sbjct: 453 NSVKQYADVEG 463
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 107/266 (40%), Gaps = 44/266 (16%)
Query: 7 PYGYSSKRRGPLNLPDDVVSF-RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-- 63
P S+KR N +D F +++ P+ G +IG+ G I ++++T I
Sbjct: 34 PEAGSTKRT---NTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 90
Query: 64 -FPGSDHRVILVVGS--------GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE 114
+PG+ RV L+ G+ G I +I +V + VS Q +R+ +
Sbjct: 91 FYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVA-KTEPVSILQPQTTVNPDRIKQ 149
Query: 115 V---EAEVEGDGDGDDVAYCGLLANTTKI-------GVVVGKGGRNVTRMRIESGAKIVM 164
D + AN KI G+++GKGG V + +SGA + +
Sbjct: 150 TLPSSPTTTKSSPSDPMTTS--RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 207
Query: 165 LPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSS 224
P + ++++ ++G +K AV +Q + +S C N + Y+N +
Sbjct: 208 SQKPDGINLQERVVTVSGEPEQNRK---AVELIIQKIQEDPQSGSCLN-----ISYANVT 259
Query: 225 DPHREFFPHLSLVPPLTGNPSDNASE 250
P P TG+P N +E
Sbjct: 260 GPVANSNP--------TGSPYANTAE 277
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 40.4 bits (93), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 113 WEVEAEVEGDGDGDDVAYCGLLAN---------TTKI-------GVVVGKGGRNVTRMRI 156
W++ E +G G G D +Y G + TT++ G ++GKGG+ + ++R
Sbjct: 357 WQMAYEPQG-GSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRH 415
Query: 157 ESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
ESGA I + P +D++I ITG ++ A + ++ S
Sbjct: 416 ESGASIKIDEP--LEGSEDRIITITGTQDQIQNAQYLLQNSVKQYS 459
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 8 YGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
Y Y+ R +L +++ ++ P + G +IG+ G I IR ++ I + GS
Sbjct: 371 YSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS 430
Query: 68 DHRVILVVGS 77
+ R+I + G+
Sbjct: 431 EDRIITITGT 440
Score = 36.6 bits (83), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLV 343
A IIGK G ++ +++ SGA I PL S +R++TI+ + +QNA L+
Sbjct: 399 AGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLL 451
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 40.4 bits (93), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 113 WEVEAEVEGDGDGDDVAYCGLLAN---------TTKI-------GVVVGKGGRNVTRMRI 156
W++ E +G G G D +Y G + TT++ G ++GKGG+ + ++R
Sbjct: 357 WQMAYEPQG-GSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRH 415
Query: 157 ESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
ESGA I + P +D++I ITG ++ A + ++ S
Sbjct: 416 ESGASIKIDEP--LEGSEDRIITITGTQDQIQNAQYLLQNSVKQYS 459
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 8 YGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
Y Y+ R +L +++ ++ P + G +IG+ G I IR ++ I + GS
Sbjct: 371 YSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS 430
Query: 68 DHRVILVVGS 77
+ R+I + G+
Sbjct: 431 EDRIITITGT 440
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLV 343
A IIGK G ++ +++ SGA I PL S +R++TI+ + +QNA L+
Sbjct: 399 AGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLL 451
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 40.4 bits (93), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 113 WEVEAEVEGDGDGDDVAYCGLLAN---------TTKI-------GVVVGKGGRNVTRMRI 156
W++ E +G G G D +Y G + TT++ G ++GKGG+ + ++R
Sbjct: 357 WQMAYEPQG-GSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRH 415
Query: 157 ESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
ESGA I + P +D++I ITG ++ A + ++ S
Sbjct: 416 ESGASIKIDEP--LEGSEDRIITITGTQDQIQNAQYLLQNSVKQYS 459
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 8 YGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
Y Y+ R +L +++ ++ P + G +IG+ G I IR ++ I + GS
Sbjct: 371 YSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS 430
Query: 68 DHRVILVVGS 77
+ R+I + G+
Sbjct: 431 EDRIITITGT 440
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLV 343
A IIGK G ++ +++ SGA I PL S +R++TI+ + +QNA L+
Sbjct: 399 AGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLL 451
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 40.4 bits (93), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 113 WEVEAEVEGDGDGDDVAYCGLLAN---------TTKI-------GVVVGKGGRNVTRMRI 156
W++ E +G G G D +Y G + TT++ G ++GKGG+ + ++R
Sbjct: 357 WQMAYEPQG-GSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRH 415
Query: 157 ESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
ESGA I + P +D++I ITG ++ A + ++ S
Sbjct: 416 ESGASIKIDEP--LEGSEDRIITITGTQDQIQNAQYLLQNSVKQYS 459
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 8 YGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
Y Y+ R +L +++ ++ P + G +IG+ G I IR ++ I + GS
Sbjct: 371 YSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS 430
Query: 68 DHRVILVVGS 77
+ R+I + G+
Sbjct: 431 EDRIITITGT 440
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLV 343
A IIGK G ++ +++ SGA I PL S +R++TI+ + +QNA L+
Sbjct: 399 AGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLL 451
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 39.3 bits (90), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 83/220 (37%), Gaps = 44/220 (20%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-FPGSDHRVILVVGS 77
N+ V+ RLV P G LIG++G+ I IR T ++ G P S R + V G
Sbjct: 96 NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG- 154
Query: 78 GSIDRRIMFCEND---VVVEG-----------------------------GEVSSTQEAV 105
+ I+ C V++E G+ + A
Sbjct: 155 --VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAE 212
Query: 106 IRVFERM------WEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESG 159
+ +++ + + V G + L IG V+G+ G ++ +R SG
Sbjct: 213 VTKLQQLSGHAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSG 272
Query: 160 AKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
A I + ++ + ITG+ +++ A +T CL+
Sbjct: 273 AHIKIG--NQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Score = 36.6 bits (83), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 18/135 (13%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ LRML G IIGK+G V+ ++ S A I+ + ER+ TI+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-------- 67
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKG-----DAVAVSILVGADFVGCLTGSGSSAV 388
AAV + + + + G V + +++ A G L G + +
Sbjct: 68 ---STAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 389 SEMEDVTGTDIKLVG 403
E+ + TG +++ G
Sbjct: 125 KEIRETTGAQVQVAG 139
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 81/227 (35%), Gaps = 57/227 (25%)
Query: 246 DNASEFHSSSADA---DRDHPGLDKKG---RKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
A+ FH+ S A D D G + V LR++ +IGK G ++ +
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEI 127
Query: 300 QNASGALISFAAP-LTKSGERVVTISALE---YLDTRH-------SPVQNAAVLVFAR-- 346
+ +GA + A L S ER VT+S + L R SP + A +
Sbjct: 128 RETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLS 187
Query: 347 --SVEVEGQQGFSSGENKGDAVAVSI---------------------------------L 371
+V + QGFS G + L
Sbjct: 188 LGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSGHAVPFASPSMVPGLDPSTQTSSQEFL 247
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVI 418
V D +GC+ G S +SE+ ++G IK+ G Q G A + V I
Sbjct: 248 VPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GNQAEG-AGERHVTI 291
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 108/269 (40%), Gaps = 47/269 (17%)
Query: 7 PYGYSSKRRGPLNLPDDVVSF-RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIH------ 59
P S+KR N +D F +++ P+ G +IG+ G I ++++T I
Sbjct: 34 PEAGSTKRT---NTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSK 90
Query: 60 CEGGFPGSDHRVILVVGS--------GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFER 111
+ +PG+ RV L+ G+ G I +I +V + VS Q +R
Sbjct: 91 SKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVA-KTEPVSILQPQTTVNPDR 149
Query: 112 MWEV---EAEVEGDGDGDDVAYCGLLANTTKI-------GVVVGKGGRNVTRMRIESGAK 161
+ + D + AN KI G+++GKGG V + +SGA
Sbjct: 150 IKQTLPSSPTTTKSSPSDPMTTS--RANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAW 207
Query: 162 IVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYS 221
+ + P + ++++ ++G +K AV +Q + +S C N + Y+
Sbjct: 208 VQLSQKPDGINLQERVVTVSGEPEQNRK---AVELIIQKIQEDPQSGSCLN-----ISYA 259
Query: 222 NSSDPHREFFPHLSLVPPLTGNPSDNASE 250
N + P P TG+P N +E
Sbjct: 260 NVTGPVANSNP--------TGSPYANTAE 280
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 81/214 (37%), Gaps = 44/214 (20%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-FPGSDHRVILVVGSGSIDRR 83
V+ RLV P G LIG++G+ I IR T ++ G P S R + V G +
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG---VPDA 158
Query: 84 IMFCEND---VVVEG-----------------------------GEVSSTQEAVIRVFER 111
I+ C V++E G+ + A + ++
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 112 M------WEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML 165
+ + + V G + L IG V+G+ G ++ +R SGA I +
Sbjct: 219 LSGHAVPFASPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG 278
Query: 166 PPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
++ + ITG+ +++ A +T CL+
Sbjct: 279 --NQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 18/135 (13%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ LRML G IIGK+G V+ ++ S A I+ + ER+ TI+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE--GSCPERITTITG-------- 67
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVA-----VSILVGADFVGCLTGSGSSAV 388
AAV + + + + G +V+ + +++ A G L G + +
Sbjct: 68 ---STAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 389 SEMEDVTGTDIKLVG 403
E+ + TG +++ G
Sbjct: 125 KEIRETTGAQVQVAG 139
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 81/227 (35%), Gaps = 57/227 (25%)
Query: 246 DNASEFHSSSADA---DRDHPGLDKKG---RKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
A+ FH+ S A D D G + V LR++ +IGK G ++ +
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEI 127
Query: 300 QNASGALISFAAP-LTKSGERVVTISALE---YLDTRH-------SPVQNAAVLVFAR-- 346
+ +GA + A L S ER VT+S + L R SP + A +
Sbjct: 128 RETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLS 187
Query: 347 --SVEVEGQQGFSSGENKGDAVAVSI---------------------------------L 371
+V + QGFS G + L
Sbjct: 188 LGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGMDPSTQTSSQEFL 247
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVI 418
V D +GC+ G S +SE+ ++G IK+ G Q G A + V I
Sbjct: 248 VPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GNQAEG-AGERHVTI 291
>sp|P81021|VIGLN_CHICK Vigilin OS=Gallus gallus GN=HDLBP PE=2 SV=1
Length = 1270
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
++GKGG N+ ++R +GA+I+ P D +LI I G AVK+A + +++L
Sbjct: 742 LIGKGGGNIRKVRDNTGARIIF---PTSEDKDQELITIMGTEEAVKEAQKELEALIKNLD 798
Query: 203 TM 204
+
Sbjct: 799 NV 800
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLV 343
A IIGK G ++ +++ SGA I PL S +R++TI+ + +QNA L+
Sbjct: 363 AGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLL 415
Score = 37.0 bits (84), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
G ++GKGG+ + ++R ESGA I + P +D++I ITG ++ A + ++
Sbjct: 364 GSIIGKGGQRIKQIRHESGASIKIDEP--LEGSEDRIITITGTQDQIQNAQYLLQNSVKQ 421
Query: 201 LS 202
S
Sbjct: 422 YS 423
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 8 YGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
Y Y+ R +L +++ ++ P + G +IG+ G I IR ++ I + GS
Sbjct: 335 YSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS 394
Query: 68 DHRVILVVGS 77
+ R+I + G+
Sbjct: 395 EDRIITITGT 404
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 198,910,589
Number of Sequences: 539616
Number of extensions: 8678906
Number of successful extensions: 23842
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 23374
Number of HSP's gapped (non-prelim): 397
length of query: 528
length of database: 191,569,459
effective HSP length: 122
effective length of query: 406
effective length of database: 125,736,307
effective search space: 51048940642
effective search space used: 51048940642
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)