Your job contains 1 sequence.
>009696
MATSGHAASGMKGEIDQESVGEYGAQNPSTVHYNYYYPGSNGSFSQVDNNGYIHTDGSHS
GVHSDNGSLLYYLPGYDPYSTLVGVDGQCVGQQPYFSSSGYLQHPVSYGSEVMPCYSWDS
TYVADIQNGNAVGFGNEKYGGSTAFAKSNGLNSVKKNGCFTNKVSKSSYTQSTKPVSKVT
QLDSDLSAGFLKGSNPLGNFSAFSNQKQGFFPNMVNYSTNGRMWNGNDRYKSRDKFSRAG
GLGMPTELIRGPRAENKSASLEISDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYS
EDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAE
MMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEI
GLKQGLEMLKIFKSYSAKTSLLDDFNFYENKERSFHGKKSSKPATLQMDIFNDDDFTKQI
KSAEKEFDEDSISIINLTKNLSLKPCTQKKSEAVKNPVEKAIPSVIAP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009696
(528 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024286 - symbol:ECT11 "AT1G09810" species:370... 860 1.5e-89 2
TAIR|locus:2207405 - symbol:ECT8 "AT1G79270" species:3702... 861 4.3e-86 1
TAIR|locus:2092815 - symbol:ECT2 "evolutionarily conserve... 705 3.2e-75 2
TAIR|locus:2023807 - symbol:ECT7 "AT1G48110" species:3702... 676 1.1e-72 2
TAIR|locus:2088995 - symbol:ECT6 "AT3G17330" species:3702... 718 6.1e-71 1
TAIR|locus:2159391 - symbol:ECT3 "AT5G61020" species:3702... 700 4.9e-69 1
TAIR|locus:2089280 - symbol:ECT5 "AT3G13060" species:3702... 671 5.3e-69 2
TAIR|locus:2095938 - symbol:ECT1 "evolutionarily conserve... 680 6.5e-67 1
TAIR|locus:2161213 - symbol:ECT10 "evolutionarily conserv... 659 1.1e-64 1
TAIR|locus:2010494 - symbol:ECT9 "AT1G27960" species:3702... 603 9.3e-59 1
UNIPROTKB|Q9Y5A9 - symbol:YTHDF2 "YTH domain family prote... 494 1.3e-51 2
MGI|MGI:1917431 - symbol:Ythdf1 "YTH domain family 1" spe... 485 3.3e-51 2
ZFIN|ZDB-GENE-040426-2786 - symbol:ythdf1 "YTH domain fam... 477 9.8e-50 2
MGI|MGI:1918850 - symbol:Ythdf3 "YTH domain family 3" spe... 477 6.8e-49 2
UNIPROTKB|Q7Z739 - symbol:YTHDF3 "YTH domain family prote... 477 6.8e-49 2
CGD|CAL0002569 - symbol:orf19.1939 species:5476 "Candida ... 337 1.3e-32 2
UNIPROTKB|Q5A1Q7 - symbol:CaO19.1939 "Putative uncharacte... 337 1.3e-32 2
SGD|S000002782 - symbol:YDR374C "Putative protein of unkn... 282 4.2e-24 1
RGD|621706 - symbol:Ythdc1 "YTH domain containing 1" spec... 179 3.4e-10 1
UNIPROTKB|Q96MU7 - symbol:YTHDC1 "YTH domain-containing p... 180 1.5e-09 2
UNIPROTKB|F1NS70 - symbol:YTHDC2 "Uncharacterized protein... 168 2.5e-09 2
TAIR|locus:2118046 - symbol:AT4G11970 "AT4G11970" species... 165 4.8e-09 1
UNIPROTKB|F1RLG0 - symbol:YTHDC2 "Uncharacterized protein... 164 7.5e-09 2
ZFIN|ZDB-GENE-041114-114 - symbol:ythdc1 "YTH domain cont... 165 1.0e-08 1
MGI|MGI:2448561 - symbol:Ythdc2 "YTH domain containing 2"... 164 2.1e-08 2
UNIPROTKB|Q9H6S0 - symbol:YTHDC2 "Probable ATP-dependent ... 161 3.3e-08 2
UNIPROTKB|F1MNU7 - symbol:YTHDC2 "Uncharacterized protein... 164 4.1e-08 2
UNIPROTKB|E2QZR7 - symbol:YTHDC2 "Uncharacterized protein... 164 2.5e-07 2
FB|FBgn0027616 - symbol:YT521-B "YT521-B" species:7227 "D... 148 7.8e-07 1
TAIR|locus:2028175 - symbol:CPSF30 "AT1G30460" species:37... 134 2.2e-05 1
>TAIR|locus:2024286 [details] [associations]
symbol:ECT11 "AT1G09810" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AK221696 EMBL:AK226991 IPI:IPI00570420
RefSeq:NP_172452.3 UniGene:At.42210 ProteinModelPortal:Q56XH8
SMR:Q56XH8 PRIDE:Q56XH8 EnsemblPlants:AT1G09810.1 GeneID:837511
KEGG:ath:AT1G09810 TAIR:At1g09810 HOGENOM:HOG000137356
InParanoid:Q56XH8 OMA:WSSTING PhylomeDB:Q56XH8
ProtClustDB:CLSN2920224 Genevestigator:Q56XH8 Uniprot:Q56XH8
Length = 470
Score = 860 (307.8 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
Identities = 198/423 (46%), Positives = 260/423 (61%)
Query: 109 GSEVMPCYSWDS--TYVADIQNGNAVGFGNEKYGGSTAFAKSNGLNSVKKNGCFTNKVSK 166
GS+V+ D+ + D + GN +K S +A S L + G +N +S+
Sbjct: 47 GSDVVSSQPNDNGQAHTTDFRKGNH----RDK-NSSDVYADST-LRGDRPKG--SNCLSQ 98
Query: 167 SSYTQSTKPVSKVT---QLDSDLSA-GF---LKGSNPLGNFSAFSNQKQGFFP--NMVNY 217
+S++ + KP+ +L + A F KG G F FSNQK P +N
Sbjct: 99 TSFS-APKPLGNFNGAGRLPPNTQAHAFRPPFKGKEAAGQFLTFSNQKTSCVPYSGYING 157
Query: 218 STNGRMWNGNDRYKSRDKFSRAGGLGMPTELIRGPRAENKSAS-LEISDKKEVLSPTVS- 275
++N W+ D K K R G EL GPRA K+ E S K+ S ++
Sbjct: 158 NSNNGFWDQRDHNK---KPERNGESDYLVELKCGPRANAKTRPPSESSPLKQNNSFALAL 214
Query: 276 -RDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKA 334
R+ YNLPDFQ +YE AKF+VIKSYSEDD+HK IKY VWSST NGNKKLDA F +AE K
Sbjct: 215 RREMYNLPDFQTDYEDAKFFVIKSYSEDDVHKSIKYSVWSSTINGNKKLDAAFRDAETKT 274
Query: 335 DETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVP 394
E G + PIFLFFSVN S QFVGLAEM+G VDFNKD+DFWQ+DKW+GFFPV+WHV+KD+P
Sbjct: 275 LEDGKKRPIFLFFSVNASRQFVGLAEMVGYVDFNKDLDFWQVDKWSGFFPVEWHVVKDIP 334
Query: 395 NTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYENKERS 454
N LRHI L+NNE+KPVTH+RDT EI LK+GL+ML IFK YSA T LLDD +FYE +E+S
Sbjct: 335 NWELRHIILDNNEDKPVTHTRDTHEIKLKEGLQMLSIFKKYSAVTFLLDDMDFYEEREKS 394
Query: 455 FHGKKSSKPATLQMDIFNDDDF------TKQIKSAEKEFD-------EDSISIINLTKNL 501
KK KPATL+MD+F + D+ +++ E+ ++ + S++N TK L
Sbjct: 395 LRAKKEHKPATLRMDLFKEKDYDYEMEGNRRMNHQERGYNWNRSSNSKTQASLVNQTKYL 454
Query: 502 SLK 504
S++
Sbjct: 455 SIR 457
Score = 53 (23.7 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 39 GSNGSFSQVDNNGYIHTDGSHSGVHSD-NGSLLY 71
GS+ SQ ++NG HT G H D N S +Y
Sbjct: 47 GSDVVSSQPNDNGQAHTTDFRKGNHRDKNSSDVY 80
Score = 38 (18.4 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 38 PGSNGSFSQVDNNGYIHTDGSHSGVHSDN 66
P NG D H D + S V++D+
Sbjct: 55 PNDNGQAHTTDFRKGNHRDKNSSDVYADS 83
>TAIR|locus:2207405 [details] [associations]
symbol:ECT8 "AT1G79270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009805 "coumarin biosynthetic process" evidence=RCA]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=RCA] EMBL:CP002684 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AF326910 EMBL:AY113874 IPI:IPI00530579
RefSeq:NP_565205.1 UniGene:At.25521 UniGene:At.48393
ProteinModelPortal:Q9FPE7 SMR:Q9FPE7 IntAct:Q9FPE7 STRING:Q9FPE7
PRIDE:Q9FPE7 EnsemblPlants:AT1G79270.1 GeneID:844267
KEGG:ath:AT1G79270 TAIR:At1g79270 InParanoid:Q9FPE7 OMA:TNGECES
PhylomeDB:Q9FPE7 ProtClustDB:CLSN2917492 ArrayExpress:Q9FPE7
Genevestigator:Q9FPE7 Uniprot:Q9FPE7
Length = 528
Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
Identities = 202/489 (41%), Positives = 282/489 (57%)
Query: 18 ESVGEY-GAQNPSTVHYNYYYPGSNGSFSQVDNNGYIH--TDGSHSGVHSDNGSLLYYLP 74
E++ Y G P +Y YYYPG +GS + +NGY T+ + + +NGS++Y +P
Sbjct: 53 ETLETYQGLPCPYGGYYGYYYPGLDGSVGEAKDNGYYGYGTEVQYPVMQGENGSVIYLMP 112
Query: 75 GYDPYSTL--------VGVDGQCVGQQPYFSSSGYLQHPVSYGSEVMPCYSWDSTYVADI 126
G+ Y VGV Q + P +++ GY Q+ Y P Y WD
Sbjct: 113 GFQSYDASQTYMPINPVGVSSQAL-HSPMYAAQGYYQNQFGYADVSSPTYLWDPV----- 166
Query: 127 QNGNAVGFGNEKYGGSTAFAKSNGLNSVKKNGCFTNKVSKSSYT---QSTKPVSKVTQLD 183
G+ +G Y T K N +S + + +K SK+S+T +P K +
Sbjct: 167 --GDRYVYGVASY---TPPLKQNISSSSHNHNNYYSK-SKNSFTGHGMGDRP--KTPRKA 218
Query: 184 SDLSAGFLKGSNPLGNFSAFSNQKQG--FFPNMVNYSTNGRMWNGNDRYKSRDKFSRAGG 241
S S PL NQ++G +P +G + N ++ K++ + ++ G
Sbjct: 219 SQNSYA----PPPL------LNQEKGRIAYPMDPVKKKSGAL-NRDETEKAKAR-TKENG 266
Query: 242 LGMPTELIRGP----RAENKSASLEI--SDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYV 295
M +L G E +S SL+ +++ + + RDQYNLP FQ +YE+A F+V
Sbjct: 267 TSM-NDLANGQDHITNGECESCSLDAEGNERSNGVGSVIRRDQYNLPSFQTKYEEAIFFV 325
Query: 296 IKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQF 355
IKSYSEDDIHK IKY+VWSST NGNKKLD+ + E++ KA + +CP+FLFFSVN SGQF
Sbjct: 326 IKSYSEDDIHKSIKYNVWSSTLNGNKKLDSAYQESQKKAADKSGKCPVFLFFSVNASGQF 385
Query: 356 VGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSR 415
G+AEM+G+VD+ K M+FWQ DKW G+FPVKWH+IKDVPN LRHI LENNENKPVT+SR
Sbjct: 386 CGVAEMIGRVDYEKSMEFWQQDKWTGYFPVKWHIIKDVPNPQLRHIILENNENKPVTNSR 445
Query: 416 DTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYENKERSFHGKKSSKPATLQMDIFNDDD 475
DTQE+ L QG E+L IFK+Y+AKTS+LDDF+FYEN+E+ KK P L+ ++D
Sbjct: 446 DTQEVRLPQGNEVLNIFKNYAAKTSILDDFDFYENREKVMVQKKLRFPPVLKK---KEED 502
Query: 476 FTKQIKSAE 484
K+ E
Sbjct: 503 LVADFKTME 511
>TAIR|locus:2092815 [details] [associations]
symbol:ECT2 "evolutionarily conserved C-terminal region
2" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
GO:GO:0005829 GO:GO:0005634 EMBL:CP002686 EMBL:AP000603
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 EMBL:AY123992
IPI:IPI00538679 RefSeq:NP_187955.2 UniGene:At.23650
UniGene:At.67751 ProteinModelPortal:Q9LJE5 SMR:Q9LJE5 STRING:Q9LJE5
PRIDE:Q9LJE5 ProMEX:Q9LJE5 EnsemblPlants:AT3G13460.1 GeneID:820548
KEGG:ath:AT3G13460 TAIR:At3g13460 InParanoid:Q9LJE5 OMA:DSRTNGR
PhylomeDB:Q9LJE5 ProtClustDB:CLSN2690909 Genevestigator:Q9LJE5
Uniprot:Q9LJE5
Length = 667
Score = 705 (253.2 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 178/439 (40%), Positives = 245/439 (55%)
Query: 98 SSGYLQHPVSYGSEVMPCYSWDSTYVADIQNGNAVGFG-NEKYGGSTAFAKSNGLNSVKK 156
++GY +Y P D + +D+Q + G G Y S+ S N +
Sbjct: 235 AAGYQDPRYAYEGYYAPVPWHDGSKYSDVQRPVS-GSGVASSYSKSSTVPSSRNQN-YRS 292
Query: 157 NGCFTNKVSKSSYTQSTKPVSKVTQLDSDLSAGFL--KGSNPLG-NFSAFSNQKQGFFPN 213
N +T+ SS T ++ + G G + LG S + ++ G
Sbjct: 293 NSHYTSVHQPSSVTGYGTAQGYYNRMYQNKLYGQYGSTGRSALGYGSSGYDSRTNG--RG 350
Query: 214 MVNYSTNGRMWN-GNDRYKSRDKFSRAGGLGMPTELIRGPRAE-------NKSASLEISD 265
R W GN Y + + GL EL RGPRA+ N SLE+ +
Sbjct: 351 WAATDNKYRSWGRGNSYYYGNE--NNVDGLN---ELNRGPRAKGTKNQKGNLDDSLEVKE 405
Query: 266 KK---------EVLSPTV--SRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWS 314
+ E + V R+QYN DF V+Y A F++IKSYSEDD+HK IKY+VW+
Sbjct: 406 QTGESNVTEVGEADNTCVVPDREQYNKEDFPVDYANAMFFIIKSYSEDDVHKSIKYNVWA 465
Query: 315 STPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFW 374
STPNGNKKL A + EA+ KA G CPIFLFFSVN SGQFVGLAEM G VDFN ++++W
Sbjct: 466 STPNGNKKLAAAYQEAQQKAG--G--CPIFLFFSVNASGQFVGLAEMTGPVDFNTNVEYW 521
Query: 375 QLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKS 434
Q DKW G FP+KWH++KDVPN+LL+HITLENNENKPVT+SRDTQE+ L+QGL+++KIFK
Sbjct: 522 QQDKWTGSFPLKWHIVKDVPNSLLKHITLENNENKPVTNSRDTQEVKLEQGLKIVKIFKE 581
Query: 435 YSAKTSLLDDFNFYENKERSFHGKKSSKPATLQMDIFNDDDFTKQIKSAEKEFDEDSISI 494
+S+KT +LDDF+FYE ++++ KK+ K Q+ D K+ +AE E ++
Sbjct: 582 HSSKTCILDDFSFYEVRQKTILEKKA-KQTQKQVSEEKVTDEKKESATAESASKESPAAV 640
Query: 495 -----INLTKNLSL-KPCT 507
+ + +N S+ KP T
Sbjct: 641 QTSSDVKVAENGSVAKPVT 659
Score = 72 (30.4 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 32/105 (30%), Positives = 47/105 (44%)
Query: 25 AQNPSTVH----YN-YYYPGSNGSFSQ-VDNNGYIHTDG--SHSGVHSDNGSLLYYLP-G 75
A +PS + YN Y Y GS + D Y + +G +SG++ +NG+++Y G
Sbjct: 65 AADPSVCYVPNPYNPYQYYNVYGSGQEWTDYPAYTNPEGVDMNSGIYGENGTVVYPQGYG 124
Query: 76 YD--PYSTL------VGVDGQCVGQQPYFSSSGYLQHPVSYGSEV 112
Y PYS +G +GQ G Q Y Y + Y S V
Sbjct: 125 YAAYPYSPATSPAPQLGGEGQLYGAQQY-QYPNYFPNSGPYASSV 168
>TAIR|locus:2023807 [details] [associations]
symbol:ECT7 "AT1G48110" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 UniGene:At.48286 UniGene:At.70184 IPI:IPI01019307
RefSeq:NP_001117446.1 RefSeq:NP_175245.1 ProteinModelPortal:F4HWS5
SMR:F4HWS5 PRIDE:F4HWS5 EnsemblPlants:AT1G48110.1
EnsemblPlants:AT1G48110.2 GeneID:841229 KEGG:ath:AT1G48110
OMA:NYGYYCT Uniprot:F4HWS5
Length = 639
Score = 676 (243.0 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 152/339 (44%), Positives = 213/339 (62%)
Query: 129 GNAVGFGNEKYGGSTAFAKSNGLNSVKKNGCFTNKVSKSSYTQ-STKPVSKVTQLDSDLS 187
GN++G +EK ++ ++ + ++ + + + T S +PV V+ S +S
Sbjct: 171 GNSLGKISEKPRPNSGQSRQSEMDKSDSTSS-SGQARQGRVTSVSAQPVDVVSS--SRVS 227
Query: 188 AGF--LKGSNP-LGNFSAFSNQKQGFFPNMVNYSTNGRMWNGNDRYKSRDKFSRAGGLGM 244
+ F L + P L +FS + P + Y + + R ++R + SRA LG
Sbjct: 228 S-FRQLDIAPPQLNDFSKIATNNNNIRPKL--YGGHANIIPDTVREQNRGRRSRA--LG- 281
Query: 245 PTELIRGPRAENKSASLEISDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYSEDDI 304
+LI +A A ++ V++P+ QYN D +++Y AKF+VIKSYSEDD+
Sbjct: 282 -NQLI--VKAYTTKAGNADAEGNIVINPS----QYNKEDLRIDYSNAKFFVIKSYSEDDV 334
Query: 305 HKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGK 364
HK IKY+VWSST +GNKKL + + +A+ A E CPIFLFFSVN SG F G+AEM G
Sbjct: 335 HKSIKYNVWSSTLHGNKKLQSAYEDAQRIATEKSCECPIFLFFSVNASGLFCGMAEMTGP 394
Query: 365 VDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQ 424
V F+KDMDFWQ DKW+G FPVKWH+IKDVPN+ RHI L+NNENKPVT+SRDTQEI LKQ
Sbjct: 395 VSFDKDMDFWQQDKWSGSFPVKWHIIKDVPNSYFRHIILQNNENKPVTNSRDTQEIMLKQ 454
Query: 425 GLEMLKIFKSYSAKTSLLDDFNFYENKERSFHGKKSSKP 463
GLE+LKIFK + +TSLLDDF +YE+++R +++ P
Sbjct: 455 GLEVLKIFKDHMERTSLLDDFVYYESRQRVMQDERTRLP 493
Score = 77 (32.2 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 37/163 (22%), Positives = 63/163 (38%)
Query: 14 EIDQESVGEYGAQNPSTVHYNYYYPGSNGSFSQVDNNGYIHTDGS---HSGVHSDNGSLL 70
E + V + G P Y YY G ++ + DGS ++G ++N +
Sbjct: 5 EAAPDFVVDQGMYYPVDASYGYYCTGYESPGDWENHQMFFGVDGSEVQYTGGQNENSPYI 64
Query: 71 YYLPGY----DPYSTL--------VGVDGQCVGQQPYFSSSGYLQHPVSYGSEVMPCYSW 118
Y P Y PY+ +GVD V Q ++S Y V+ +P Y+
Sbjct: 65 CYTPSYGYAQSPYNPFNPYIPGASIGVDSAFVAPQQFYSIPPY--QSVATSPTFVP-YAI 121
Query: 119 DSTYVADIQNGNAVGFGNEKYGGSTAFAKSNGLNSVKKNGCFT 161
V++ + V G+ G +S+G S +++G T
Sbjct: 122 QPEIVSNSSTNSLVETGSANRG------RSDGRGSRQRSGTAT 158
>TAIR|locus:2088995 [details] [associations]
symbol:ECT6 "AT3G17330" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] EMBL:CP002686
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 EMBL:BT025338
IPI:IPI00522737 RefSeq:NP_188359.2 UniGene:At.38744
ProteinModelPortal:Q1JPL5 SMR:Q1JPL5 PRIDE:Q1JPL5
EnsemblPlants:AT3G17330.1 GeneID:820996 KEGG:ath:AT3G17330
TAIR:At3g17330 InParanoid:Q1JPL5 OMA:RECPIFL PhylomeDB:Q1JPL5
ProtClustDB:CLSN2682185 Genevestigator:Q1JPL5 Uniprot:Q1JPL5
Length = 595
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 188/510 (36%), Positives = 268/510 (52%)
Query: 32 HYNYYYPGSNG-SFSQVDNNGYIHTDGSHSGVHSDNGSLLYYLPGYDPYSTLVGVDGQCV 90
+Y+ Y S G Q +N YI S+ S Y+PG +GVD V
Sbjct: 20 YYSSGYDSSVGLQGGQNENAPYICYTPSYGYAQSPYNPYNPYIPGAS-----IGVDSSFV 74
Query: 91 GQQPYFSSSGY---LQHPVSYGSEVMPCYSWDSTYVADIQNGN-AVGFGNEKYGGSTAFA 146
G Q Y+S Y P + P +S+ + + NG + G G+ + GS
Sbjct: 75 GFQQYYSDPPYESAASSPTYVPYVIQPDMVSNSSTDSLVANGGQSDGRGSMQRNGSAIAG 134
Query: 147 ------KSNGLNSVKKNGCFTNKVSKSSYTQSTKPVSKVTQLDSDLSAGFLKGSNPLGNF 200
KS K+ G N VS ++ S + K ++ L G +N + +
Sbjct: 135 LPKDAPKSTTTGQYKQPGIPKN-VSTTASAHSLQ--GKTAYANTLLPYGKSDIANGVSSI 191
Query: 201 SAFSNQK-QGFFPNMVNYSTNGRMWNGNDRYKSRDKFSRAGGLGMPTELIRGPRAENKSA 259
+++S + + + +T G + SR + SR +LI +A A
Sbjct: 192 ASYSYKPCSKIYDARGDNNTTGSTYTSEQNRGSRTRRSR-------NQLI--VKAYTTKA 242
Query: 260 SLEISDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNG 319
++ V++P D+YN DF +EY A+F+VIKSYSEDD+HK IKY VWSST NG
Sbjct: 243 GNADAEGNIVINP----DRYNKEDFSIEYSDARFFVIKSYSEDDVHKSIKYGVWSSTLNG 298
Query: 320 NKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKW 379
NKKL + + +A+ A E CPIFLFFSVN SG F G+AEM G V F++DMDFWQ DKW
Sbjct: 299 NKKLQSVYEDAQRIATEKSRECPIFLFFSVNSSGLFCGVAEMTGPVSFDRDMDFWQQDKW 358
Query: 380 NGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKT 439
+G FPVKWH+IKDVPN+ RHI L NNENKPVT+SRDTQEI LKQGLE+LK+FK ++ KT
Sbjct: 359 SGSFPVKWHIIKDVPNSYFRHIILHNNENKPVTNSRDTQEIILKQGLEVLKLFKHHAEKT 418
Query: 440 SLLDDFNFYENKERSFHGKKSSKP-ATLQ--MDIFNDDDFTKQIKSAEKEFDEDSISIIN 496
SLLDDF +YE+++R +++ P T + + N D + KS++ + S++
Sbjct: 419 SLLDDFMYYEDRQRLMQEERARLPFRTFRRPFPVLNLDFSDRSKKSSKDVVKKPSVTSAE 478
Query: 497 LTKNLSLKPCTQKKSEAVKNPVEKAIPSVI 526
TK + LK + + + + PS +
Sbjct: 479 -TKVVQLKNSDGDEKSNTQEATDDSTPSTL 507
>TAIR|locus:2159391 [details] [associations]
symbol:ECT3 "AT5G61020" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=RCA] EMBL:CP002688
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 IPI:IPI00547508
RefSeq:NP_851236.1 UniGene:At.21835 UniGene:At.70904 PRIDE:F4K1Z0
EnsemblPlants:AT5G61020.1 GeneID:836223 KEGG:ath:AT5G61020
OMA:HASKTCI Uniprot:F4K1Z0
Length = 495
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 141/250 (56%), Positives = 183/250 (73%)
Query: 227 NDRYKSRDKFSRAGGLGMP--TELIRGPRA-----ENKSASLEISDKKEVLSPT--VSRD 277
N+ YK R+ + G + E+ RGPRA ++ S + +S K++ ++ T +S D
Sbjct: 181 NNTYKPRNGYHGYGKENIEGLNEMNRGPRAKGFNSQDGSKVMAVSLKEQRVTETEKLSED 240
Query: 278 -------QYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEA 330
YN DF Y +AKFYVIKSYSEDDIHK IKY VWSSTPNGNKKLDA++NEA
Sbjct: 241 VSLLDPKDYNKIDFPETYTEAKFYVIKSYSEDDIHKSIKYSVWSSTPNGNKKLDASYNEA 300
Query: 331 EAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVI 390
+ K+D G CP+FL FSVN SGQFVGLAEM+G VDFNK +++WQ DKW G FPVKWH +
Sbjct: 301 KQKSD--G--CPVFLLFSVNTSGQFVGLAEMVGPVDFNKTVEYWQQDKWIGCFPVKWHFV 356
Query: 391 KDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYEN 450
KD+PN+ LRHITLENNENKPVT+SRDTQE+ L+QG++++KIFK +++KT +LDDF FYEN
Sbjct: 357 KDIPNSSLRHITLENNENKPVTNSRDTQEVKLEQGIKVIKIFKDHASKTCILDDFEFYEN 416
Query: 451 KERSFHGKKS 460
+++ +KS
Sbjct: 417 RQKIIQERKS 426
>TAIR|locus:2089280 [details] [associations]
symbol:ECT5 "AT3G13060" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR InterPro:IPR007275
Pfam:PF04146 PROSITE:PS50882 eggNOG:NOG276347 EMBL:AK228498
IPI:IPI00526241 RefSeq:NP_187912.2 UniGene:At.39501
UniGene:At.47843 ProteinModelPortal:Q0WR25 SMR:Q0WR25 PaxDb:Q0WR25
PRIDE:Q0WR25 EnsemblPlants:AT3G13060.2 GeneID:820492
KEGG:ath:AT3G13060 TAIR:At3g13060 HOGENOM:HOG000238171
InParanoid:Q0WR25 OMA:HITKSFA PhylomeDB:Q0WR25
ProtClustDB:CLSN2690899 Genevestigator:Q0WR25 Uniprot:Q0WR25
Length = 634
Score = 671 (241.3 bits), Expect = 5.3e-69, Sum P(2) = 5.3e-69
Identities = 144/295 (48%), Positives = 183/295 (62%)
Query: 189 GFLKGSNPLGN---FSAFSNQKQGFFPNMV-NYSTNGRMWNGNDRYKSRDKFS--RAGGL 242
GF GSN S Q + ++ N + W G D + R + S GG
Sbjct: 279 GFGSGSNSYNRGYMHSGGRGQGSNYGSRLISNVGMGNQGWIGVDNSRGRGRVSDPSLGGA 338
Query: 243 GMPT-----ELIRGPRAEN-KSASLEISD-----KKEVLSPTVSRDQYNLPDFQVEYEKA 291
T E RGPRA K+ LE D KK ++ N DF +Y A
Sbjct: 339 YNGTFDILNEQNRGPRASKPKTQVLEELDSAADSKKNNKGSAKEHEESNNADFVTDYTNA 398
Query: 292 KFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNG 351
K ++IKSYSED++HK IKY+VW+STPNGNKKLDA + EA+ DE CP+FL FSVN
Sbjct: 399 KLFIIKSYSEDNVHKSIKYNVWASTPNGNKKLDAAYREAK---DEKEP-CPLFLLFSVNA 454
Query: 352 SGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPV 411
S QF G+AEM+G VDF K +D+WQ DKW+G FPVKWH+IKDVPN+ RHI LENN+NKPV
Sbjct: 455 SSQFCGVAEMVGPVDFEKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFRHIILENNDNKPV 514
Query: 412 THSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYENKERSFHGKKSSKPATL 466
T+SRDTQE+ L+QG+EMLKIFK+Y A TS+LDDF FYE +E+ +K+ + +L
Sbjct: 515 TNSRDTQEVKLEQGIEMLKIFKNYDADTSILDDFGFYEEREKIIQDRKARRQPSL 569
Score = 47 (21.6 bits), Expect = 5.3e-69, Sum P(2) = 5.3e-69
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 76 YDPYSTLVGVDGQCVGQQPYFSSSGYLQHPVSYG-SEVMP 114
+D YS+ V V+G + F+ + L + YG + MP
Sbjct: 94 WDEYSSYVNVEGLDITSPVGFNENASLVYQTGYGYNPQMP 133
>TAIR|locus:2095938 [details] [associations]
symbol:ECT1 "evolutionarily conserved C-terminal region
1" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019722 "calcium-mediated signaling" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] GO:GO:0005634 EMBL:CP002686 GO:GO:0019722
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
HOGENOM:HOG000238171 EMBL:AY894117 EMBL:AK317103 IPI:IPI00657449
RefSeq:NP_001030629.1 UniGene:At.27388 SMR:Q3MK94 IntAct:Q3MK94
EnsemblPlants:AT3G03950.3 GeneID:819550 KEGG:ath:AT3G03950
TAIR:At3g03950 eggNOG:NOG299038 OMA:YYEAKEN ProtClustDB:CLSN2688051
Genevestigator:Q3MK94 Uniprot:Q3MK94
Length = 428
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 161/391 (41%), Positives = 214/391 (54%)
Query: 87 GQCVGQQPYFSSSGYLQHPVSYGSEVMPCYSWDSTYVADIQNGNAVG----FGNEKYGGS 142
G + P + G QHP YG S S ++ GN + G+ +G
Sbjct: 29 GSDANEVPMNFTKGSFQHP--YGHAPYGASSHGSERRPNMNAGNLLNGGDSIGSYPWGYI 86
Query: 143 TAFAKSNGLNSVKKNGCFTNKVSKSSYTQSTKPVS--KVTQLDSDLSAGFLKGSNPLGNF 200
A S G + + + SS++ P S +V D L SN G +
Sbjct: 87 PANYPSGGYPDPRFG--YDRNSNHSSFSHLMNPHSSQEVPSFDQ-LGYNDHLYSNH-GLY 142
Query: 201 SAFSNQ-KQGFFPNMVNYST--NGRMWNGNDRYKSRDKFSRAGGLGMP-----TELIRGP 252
+ N G Y + GR W D Y+ F+ G EL RGP
Sbjct: 143 GLYGNVIDSGHAYGTFGYDSWKLGRGWYPVDGYRKTRSFNHGRGYSDEKADRLNELCRGP 202
Query: 253 RAEN-KSASLEISDKKEVLSPTVSR---DQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCI 308
R+ + K+ + S + + VS +YN +F + KAKF+VIKSYSEDD+H CI
Sbjct: 203 RSSDFKNPQVLNSSMLDAMKQDVSAVDLQRYNGENFPESFVKAKFFVIKSYSEDDVHNCI 262
Query: 309 KYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFN 368
KY WSSTP GNKKL+A + EA+ + E CP++L FSVN SGQFVGLAEM+G VDFN
Sbjct: 263 KYGAWSSTPTGNKKLNAAYYEAKENSQE----CPVYLLFSVNASGQFVGLAEMVGPVDFN 318
Query: 369 KDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEM 428
K M++WQ DKW G FPVKWH+IKD+PN+LLRHITL NNENKPVT+SRDTQE+ L+ G ++
Sbjct: 319 KTMEYWQQDKWIGCFPVKWHIIKDIPNSLLRHITLANNENKPVTNSRDTQEVNLEHGTKI 378
Query: 429 LKIFKSYSAKTSLLDDFNFYENKERSFHGKK 459
+KIFK Y +KT +LDD+ FYE +++ KK
Sbjct: 379 IKIFKEYMSKTCILDDYKFYETRQKIIRDKK 409
>TAIR|locus:2161213 [details] [associations]
symbol:ECT10 "evolutionarily conserved C-terminal region
10" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] EMBL:CP002688 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 IPI:IPI00522420 RefSeq:NP_974954.1 UniGene:At.28271
UniGene:At.29291 ProteinModelPortal:F4KDJ9 SMR:F4KDJ9 PRIDE:F4KDJ9
EnsemblPlants:AT5G58190.2 GeneID:835931 KEGG:ath:AT5G58190
OMA:RFCHILL PhylomeDB:F4KDJ9 Uniprot:F4KDJ9
Length = 528
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 167/460 (36%), Positives = 249/460 (54%)
Query: 26 QNPSTVHYNYYYPGSNGSFSQVDN--NGYIH-----TDGSHSG--VHSDNGSLLYYLPGY 76
Q P+ + Y+Y + +N ++Q N +GY + H V++DN SL+Y PGY
Sbjct: 64 QTPTNL-YHYDWDIANSGYAQGINTWDGYPRYATTTPEAMHVPPVVYNDNSSLMYQYPGY 122
Query: 77 DPYSTLVGVDGQCVGQQPYFSSSGYLQHPVSYGSEV--MPCYSWDSTYVADIQNGNAVGF 134
++ V GQ P S Y P S + +P D T A + + +
Sbjct: 123 G-FNPYPSV--MLEGQIPV--SPAYYPQPFGAPSAMHYLPS-DIDPTSAAYM-----IPY 171
Query: 135 GNEKYGGSTAFAKSNGLNSVKKNGCFTNKVS-KSSYTQSTKPVSKVTQLDSDLSAGFLKG 193
G +YGG ++ + G S+ + + + Y + V+ L +
Sbjct: 172 G--QYGGGN-YSGNQGDISLTSHIPYPQTMGILGPYDHNASQVA--------LHGSGVAS 220
Query: 194 SNPLGNF-SAFSNQKQGFFPNMVNYSTNGRMWNGNDRYKSRDKFSRAGGLGMPTELI--R 250
S+ LG + S Q P+ Y + R+ D K R+K G + ++L R
Sbjct: 221 SSSLGGYYHVGSYQNPSSTPSY--YGVDNRVRLTPDIGKRREKDQ--GSISSTSDLYGNR 276
Query: 251 GPRAENKSASLEISDKKEVLSPTVSRDQ--------YNLPDFQVEYEKAKFYVIKSYSED 302
GPRA ++ S S + + S YN P+F +Y+ AKF+++KS+SED
Sbjct: 277 GPRASSRVKSKNSSKPCSTIGDSASDSSTAGPNPSLYNHPEFVTDYKNAKFFIVKSFSED 336
Query: 303 DIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMM 362
++H+ IKY+VW+STP+GNKKLD + +AE + G +CPIFLFFSVN SGQF G++EM+
Sbjct: 337 NVHRSIKYNVWASTPHGNKKLDTAYRDAE----KMGGKCPIFLFFSVNASGQFCGVSEMV 392
Query: 363 GKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGL 422
G VDF KD +WQ D+W+G FPVKWH++KD+PN HI L+NN+NKPVTHSRD+QE+ L
Sbjct: 393 GPVDFEKDAGYWQQDRWSGQFPVKWHIVKDIPNNRFCHILLQNNDNKPVTHSRDSQEVKL 452
Query: 423 KQGLEMLKIFKSYSAKTSLLDDFNFYENKERSFHGKKSSK 462
+QG+EML+IFK Y A TS+LDDF +Y+ E G+ ++
Sbjct: 453 RQGIEMLRIFKEYEAHTSILDDFGYYDELEGQKVGEDGTR 492
>TAIR|locus:2010494 [details] [associations]
symbol:ECT9 "AT1G27960" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016571 "histone methylation" evidence=RCA]
EMBL:CP002684 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
eggNOG:NOG276347 EMBL:BT022109 IPI:IPI00540009 RefSeq:NP_174117.2
UniGene:At.40970 ProteinModelPortal:Q500V8 SMR:Q500V8
EnsemblPlants:AT1G27960.1 GeneID:839689 KEGG:ath:AT1G27960
TAIR:At1g27960 InParanoid:Q500V8 OMA:DIFISCE PhylomeDB:Q500V8
ProtClustDB:CLSN2918485 Genevestigator:Q500V8 Uniprot:Q500V8
Length = 539
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 119/241 (49%), Positives = 168/241 (69%)
Query: 229 RYKSRDKFSRAGG-LGMPTELIRGPRAENKSASLEISDKKEVLSPTVSR-DQYNLPDFQV 286
R +S + FS L M TE RGPRA ++ K +++S R D++ +
Sbjct: 274 RSESYNDFSHCPAMLDMLTESNRGPRASR------LNSKSKMIS--YDRVDRFCQQELLS 325
Query: 287 EYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLF 346
++ AKF+VIKSYSED++HK IK+ VW+ST NGNKKLDA + EA+ K CP+FL
Sbjct: 326 QFRDAKFFVIKSYSEDNVHKSIKHCVWASTKNGNKKLDAAYREAKKK----DVACPVFLL 381
Query: 347 FSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENN 406
FSVN S QF G+AEM+G VDFN +++WQ D+W+G FPV+W ++KDVPN+L RHI +E+N
Sbjct: 382 FSVNASSQFCGVAEMVGPVDFNTSVEYWQQDRWSGHFPVQWLIVKDVPNSLFRHIIIESN 441
Query: 407 ENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYENKERSFHGKKSSKPATL 466
+NKPVT+SRDTQE+GL++G+EML IF S ++S+LDDFNFYE ++ + +K+ + A L
Sbjct: 442 DNKPVTNSRDTQEVGLEKGIEMLDIFISCEMRSSILDDFNFYEERQIAIQDRKARQRAVL 501
Query: 467 Q 467
+
Sbjct: 502 E 502
>UNIPROTKB|Q9Y5A9 [details] [associations]
symbol:YTHDF2 "YTH domain family protein 2" species:9606
"Homo sapiens" [GO:0006959 "humoral immune response" evidence=TAS]
EMBL:CH471059 GO:GO:0006959 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AL645729 eggNOG:NOG276347 HOVERGEN:HBG060315
EMBL:AF155095 EMBL:AF192968 EMBL:AF432214 EMBL:AK292581
EMBL:AK303833 EMBL:AL356786 EMBL:BC002559 IPI:IPI00306043
IPI:IPI00397024 RefSeq:NP_001166299.1 RefSeq:NP_001166599.1
RefSeq:NP_057342.2 UniGene:Hs.532286 ProteinModelPortal:Q9Y5A9
SMR:Q9Y5A9 IntAct:Q9Y5A9 STRING:Q9Y5A9 PhosphoSite:Q9Y5A9
DMDM:41019527 PaxDb:Q9Y5A9 PRIDE:Q9Y5A9 DNASU:51441
Ensembl:ENST00000373812 Ensembl:ENST00000541996
Ensembl:ENST00000542507 GeneID:51441 KEGG:hsa:51441 UCSC:uc001brc.3
CTD:51441 GeneCards:GC01P029063 HGNC:HGNC:31675 MIM:610640
neXtProt:NX_Q9Y5A9 PharmGKB:PA134964518 InParanoid:Q9Y5A9
OMA:SVPKVVG OrthoDB:EOG4001J0 PhylomeDB:Q9Y5A9 GenomeRNAi:51441
NextBio:55027 PMAP-CutDB:Q9Y5A9 ArrayExpress:Q9Y5A9 Bgee:Q9Y5A9
CleanEx:HS_YTHDF2 Genevestigator:Q9Y5A9 GermOnline:ENSG00000198492
Uniprot:Q9Y5A9
Length = 579
Score = 494 (179.0 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 95/199 (47%), Positives = 125/199 (62%)
Query: 264 SDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKL 323
S+ VL S + YN DF + + ++IKSYSEDDIH+ IKY++W ST +GNK+L
Sbjct: 383 SEPHPVLEKLRSINNYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRL 442
Query: 324 DATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFF 383
DA + K P++L FSVNGSG F G+AEM VD+N W DKW G F
Sbjct: 443 DAAYRSMNGKG-------PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRF 495
Query: 384 PVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKTSLLD 443
V+W +KDVPN+ LRHI LENNENKPVT+SRDTQE+ L++ ++LKI SY TS+ D
Sbjct: 496 DVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFD 555
Query: 444 DFNFYENKERSFHGKKSSK 462
DF+ YE ++ K +
Sbjct: 556 DFSHYEKRQEEEESVKKER 574
Score = 59 (25.8 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 39/148 (26%), Positives = 55/148 (37%)
Query: 72 YLPGYDPYSTLVGVDGQCVGQQPYFSSSGYLQHP--VSYGSEVMPCYSWDSTYVADIQNG 129
YLP Y YS +G +G+ + S+ G P SYG + + ++ D
Sbjct: 55 YLPSY--YSPSIGFS-YSLGEAAW-STGGDTAMPYLTSYGQ----LSNGEPHFLPDAM-- 104
Query: 130 NAVGFGNEKYGGSTAFAKSNGLNSVKKNGCFT---NKVSKSSYTQSTKPVSKVTQLDSDL 186
FG GST F +G N F+ N S+ TQS+ S S L
Sbjct: 105 ----FGQPGALGSTPFLGQHGFNFFPSGIDFSAWGNNSSQGQSTQSSGYSSNYAYAPSSL 160
Query: 187 SAGFLKGSNPLGNFSAFSNQKQGFFPNM 214
+ G SAF+N+ P M
Sbjct: 161 GGAMIDGQ------SAFANETLNKAPGM 182
Score = 42 (19.8 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 187 SAGFLKGSNPLGNFSAFSNQKQGFFPNMVNYSTNGRMWNGNDRYKSRDKFSRAGGLG 243
S GF S LG +A+S P + +Y G++ NG + F + G LG
Sbjct: 63 SIGF---SYSLGE-AAWSTGGDTAMPYLTSY---GQLSNGEPHFLPDAMFGQPGALG 112
Score = 41 (19.5 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 84 GVDGQCVGQQPYFSSSGYLQ-HPV 106
GVDG VGQ S S + HPV
Sbjct: 365 GVDGNGVGQSQAGSGSTPSEPHPV 388
>MGI|MGI:1917431 [details] [associations]
symbol:Ythdf1 "YTH domain family 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] MGI:MGI:1917431 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 eggNOG:NOG276347 GeneTree:ENSGT00390000017549
EMBL:AK046768 EMBL:AK172582 EMBL:BC061479 EMBL:BC065050
IPI:IPI00187444 RefSeq:NP_776122.1 UniGene:Mm.30205
ProteinModelPortal:P59326 SMR:P59326 STRING:P59326
PhosphoSite:P59326 PaxDb:P59326 PRIDE:P59326
Ensembl:ENSMUST00000037299 GeneID:228994 KEGG:mmu:228994 CTD:54915
HOGENOM:HOG000232058 HOVERGEN:HBG060315 OrthoDB:EOG4894M9
ChiTaRS:YTHDF1 NextBio:379293 Bgee:P59326 CleanEx:MM_YTHDF1
Genevestigator:P59326 GermOnline:ENSMUSG00000038848 Uniprot:P59326
Length = 559
Score = 485 (175.8 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 96/217 (44%), Positives = 129/217 (59%)
Query: 236 FSRAGGLGMPTELIRGPRAENKSASLEISDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYV 295
F ++GG + + G + S+E VL + YN +F + + ++
Sbjct: 338 FGQSGGANSDSNSV-GNAQPTSAPSVE---SHPVLEKLKAAHSYNPKEFDWNLKSGRVFI 393
Query: 296 IKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQF 355
IKSYSEDDIH+ IKY +W ST +GNK+LD F +K P++L FSVNGSG F
Sbjct: 394 IKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKG-------PVYLLFSVNGSGHF 446
Query: 356 VGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSR 415
G+AEM VD+ W DKW G F VKW +KDVPN LRHI LENN+NKPVT+SR
Sbjct: 447 CGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNSR 506
Query: 416 DTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYENKE 452
DTQE+ L++ ++LKI SY TS+ DDF+ YE ++
Sbjct: 507 DTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQ 543
Score = 64 (27.6 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 39/159 (24%), Positives = 56/159 (35%)
Query: 25 AQNPSTVHYNYYYPGSNGSFSQVDNNGYIHTDGSHSGVHSDNGSLLYYLPGYDPYSTLVG 84
A +P + Y SNG + + + G + ++ + P + + T G
Sbjct: 78 AGDPPIPYLTTYGQLSNGDHHFMHDAVFGQPGGLGNNIYQHRFNFFPENPAFSAWGTS-G 136
Query: 85 VDGQCVGQQPYFSSSGYLQHPVSYGSEVMPC---YSWDSTYVADIQNGNAVGFGNEKYGG 141
GQ Y SS Y P S G V+ + DS A N G K G
Sbjct: 137 SQGQQTQSSAYGSS--YTYPPSSLGGTVVDGQTGFHSDSLNKAPGMNSLEQGMVGLKIGD 194
Query: 142 STAFAKSNGLNSVKKNGCFTNKVSKSSYTQSTKPVSKVT 180
T A + SV + T +S + T PVSK T
Sbjct: 195 VTTSAVKT-VGSVVNSVALTGVLSGNGGTNVNMPVSKPT 232
Score = 46 (21.3 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 212 PNMVNYSTNGRMWNGNDRYKSRDKFSRAGGLG 243
P + +T G++ NG+ + F + GGLG
Sbjct: 81 PPIPYLTTYGQLSNGDHHFMHDAVFGQPGGLG 112
Score = 45 (20.9 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 21 GEYGAQNPSTVH-YNYYYPGSNGSFSQVDNNGYIHTD 56
G G Q S+ + +Y YP S+ + VD H+D
Sbjct: 136 GSQGQQTQSSAYGSSYTYPPSSLGGTVVDGQTGFHSD 172
>ZFIN|ZDB-GENE-040426-2786 [details] [associations]
symbol:ythdf1 "YTH domain family, member 1"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND]
ZFIN:ZDB-GENE-040426-2786 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 eggNOG:NOG276347 GeneTree:ENSGT00390000017549
CTD:54915 HOGENOM:HOG000232058 HOVERGEN:HBG060315 OrthoDB:EOG4894M9
EMBL:BX649575 EMBL:CR759927 EMBL:BC046885 IPI:IPI00501109
RefSeq:NP_997878.1 UniGene:Dr.116333 Ensembl:ENSDART00000025171
GeneID:327606 KEGG:dre:327606 InParanoid:Q802Z0 OMA:PSMTDPY
NextBio:20810106 Uniprot:Q802Z0
Length = 614
Score = 477 (173.0 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 92/200 (46%), Positives = 125/200 (62%)
Query: 269 VLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFN 328
VL + YN +F + + ++IKSYSEDDIH+ IKY +W ST +GNK+LD+ F
Sbjct: 407 VLEKLRAAHSYNPKEFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFR 466
Query: 329 EAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWH 388
K P++L FSVNGSG F G+AEM VD+ W DKW G F V W
Sbjct: 467 AINGKG-------PVYLLFSVNGSGHFCGVAEMRSPVDYGTSAGVWAQDKWKGKFDVDWL 519
Query: 389 VIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFY 448
+KDVPN+ LRHI LENN+NKPVT+SRDTQE+ L++ ++LKI +Y TS+ DDF+ Y
Sbjct: 520 FVKDVPNSQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATYKHTTSIFDDFSHY 579
Query: 449 ENKERSFHG-KKSSKPATLQ 467
E ++ +K+ +PA +Q
Sbjct: 580 EKRQEEEEVVRKNLEPAPIQ 599
Score = 58 (25.5 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 46/199 (23%), Positives = 74/199 (37%)
Query: 41 NGSFSQV----DNNGYIHTDGSHSGVHSDNGSLLYYLPGYDPYSTLVGVDGQCVGQQPYF 96
NGS Q DN+ + G + +S YL Y Y+ +G + + P+
Sbjct: 20 NGSLHQKETVHDNDFEPYLTGQSNPNNSYQSMTDPYLSSY--YAPSIGFPYP-LSEAPW- 75
Query: 97 SSSGYLQHPVSYGSEVMPCYSWDSTYVADIQNGNAVGFGNEKYGGSTAFAKSN-GLNSVK 155
S+ G P+ Y + P + D ++ D G G G+ Y F N ++
Sbjct: 76 STGG--DPPIPYLTPYAPLSNGDHHFMHDTVFGQPGGLGSSIYPHRFNFFPENPAFSAWG 133
Query: 156 KNGCFTNKVSKSSY--TQSTKPVSKVTQLDSDLSAGFLKGSNPLGNFSAFSNQKQGFFPN 213
+G + S+Y + S P S L D GF S+ L ++ +QG
Sbjct: 134 TSGSQGQQTQSSAYGGSYSYPPSSLGGTLVPDGQTGF--PSDTLNKAPGMNSLEQG---- 187
Query: 214 MVNYSTNGRMWNGNDRYKS 232
MV G + G K+
Sbjct: 188 MVGLKIGGDVTGGGSGVKT 206
>MGI|MGI:1918850 [details] [associations]
symbol:Ythdf3 "YTH domain family 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] MGI:MGI:1918850 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 eggNOG:NOG276347 GeneTree:ENSGT00390000017549
HOGENOM:HOG000232058 HOVERGEN:HBG060315 CTD:253943
OrthoDB:EOG4RR6H8 EMBL:AK137245 EMBL:AK039176 EMBL:AK053736
EMBL:BC057158 EMBL:BC067040 EMBL:BC067042 IPI:IPI00227149
IPI:IPI00465894 IPI:IPI00742314 RefSeq:NP_001139391.1
RefSeq:NP_766265.3 UniGene:Mm.23834 ProteinModelPortal:Q8BYK6
SMR:Q8BYK6 STRING:Q8BYK6 PhosphoSite:Q8BYK6 PaxDb:Q8BYK6
PRIDE:Q8BYK6 Ensembl:ENSMUST00000108345 Ensembl:ENSMUST00000108346
GeneID:229096 KEGG:mmu:229096 UCSC:uc008org.2 UCSC:uc008orh.2
UCSC:uc008ori.2 OMA:STGMTSI ChiTaRS:YTHDF3 NextBio:379337
Bgee:Q8BYK6 CleanEx:MM_YTHDF3 Genevestigator:Q8BYK6 Uniprot:Q8BYK6
Length = 585
Score = 477 (173.0 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 93/195 (47%), Positives = 122/195 (62%)
Query: 258 SASLEISDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTP 317
SAS + VL + + YN DF + + ++IKSYSEDDIH+ IKY +W ST
Sbjct: 383 SASPSSVEVHPVLEKLKAINNYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTE 442
Query: 318 NGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLD 377
+GNK+LDA + K P++L FSVNGSG F G+AEM VD+N W D
Sbjct: 443 HGNKRLDAAYRSLNGKG-------PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQD 495
Query: 378 KWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSA 437
KW G F VKW +KDVPN LRHI LENN+NKPVT+SRDTQE+ L++ ++LKI ++
Sbjct: 496 KWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKH 555
Query: 438 KTSLLDDFNFYENKE 452
TS+ DDF YE ++
Sbjct: 556 TTSIFDDFAHYEKRQ 570
Score = 50 (22.7 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 34/148 (22%), Positives = 59/148 (39%)
Query: 72 YLPGYDPYSTLVGVDGQCVGQQPYFSSSGYLQHPVSYGSEVMPCYSWDSTYVADIQNGNA 131
Y+P Y Y+ +G +G+ + S++G P+ Y + + + Y+ D
Sbjct: 56 YMPSY--YAPSIGFP-YSLGEAAW-STAG--DQPMPYLTTYGQMSNGEHHYIPDGVFSQP 109
Query: 132 VGFGNEKYGGSTAFAKSNGLNSVKKNGCFTNKVSKSSYTQSTK----------PVSKVTQ 181
GN + F +G N N F+ + S QST+ P S + +
Sbjct: 110 GALGN-----TPPFLGQHGFNFFPGNADFSTWGTSGSQGQSTQNSAYSSSYGYPPSSLGR 164
Query: 182 LDSDLSAGFLKGSNPLGNFSAFSNQKQG 209
+D AGF G++ L S+ +QG
Sbjct: 165 AITDGQAGF--GNDTLSKVPGISSIEQG 190
Score = 48 (22.0 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 218 STNGRMWNGNDRYKSRDKFSRAGGLG 243
+T G+M NG Y FS+ G LG
Sbjct: 88 TTYGQMSNGEHHYIPDGVFSQPGALG 113
Score = 40 (19.1 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 25/86 (29%), Positives = 34/86 (39%)
Query: 6 HAASGMKGEIDQESVGEYGAQNPSTVHYNYYYPGSNGSFSQVDNNGYIHTDGSHSGVHSD 65
H + G D + G G+Q ST N Y S G + G TDG +G +D
Sbjct: 122 HGFNFFPGNADFSTWGTSGSQGQST--QNSAYSSSYGY--PPSSLGRAITDGQ-AGFGND 176
Query: 66 NGSLLYYLPGYDPYSTLVGVDGQCVG 91
L +PG S G+ G +G
Sbjct: 177 T---LSKVPGIS--SIEQGMTGLKIG 197
>UNIPROTKB|Q7Z739 [details] [associations]
symbol:YTHDF3 "YTH domain family protein 3" species:9606
"Homo sapiens" [GO:0005515 "protein binding" evidence=IPI]
EMBL:CH471068 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
eggNOG:NOG276347 HOVERGEN:HBG060315 EMBL:AK127574 EMBL:AL832005
EMBL:BX537996 EMBL:BC052970 IPI:IPI00396131 RefSeq:NP_689971.4
UniGene:Hs.491861 ProteinModelPortal:Q7Z739 SMR:Q7Z739
IntAct:Q7Z739 STRING:Q7Z739 PhosphoSite:Q7Z739 DMDM:74738853
PaxDb:Q7Z739 PRIDE:Q7Z739 DNASU:253943 GeneID:253943
KEGG:hsa:253943 UCSC:uc003xuy.3 CTD:253943 GeneCards:GC08P064081
HGNC:HGNC:26465 neXtProt:NX_Q7Z739 PharmGKB:PA134976395
InParanoid:Q7Z739 OrthoDB:EOG4RR6H8 GenomeRNAi:253943 NextBio:92198
PMAP-CutDB:Q7Z739 CleanEx:HS_YTHDF3 Genevestigator:Q7Z739
Uniprot:Q7Z739
Length = 585
Score = 477 (173.0 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 93/195 (47%), Positives = 122/195 (62%)
Query: 258 SASLEISDKKEVLSPTVSRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTP 317
SAS + VL + + YN DF + + ++IKSYSEDDIH+ IKY +W ST
Sbjct: 383 SASPSSVEVHPVLEKLKAINNYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTE 442
Query: 318 NGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLD 377
+GNK+LDA + K P++L FSVNGSG F G+AEM VD+N W D
Sbjct: 443 HGNKRLDAAYRSLNGKG-------PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQD 495
Query: 378 KWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSA 437
KW G F VKW +KDVPN LRHI LENN+NKPVT+SRDTQE+ L++ ++LKI ++
Sbjct: 496 KWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKH 555
Query: 438 KTSLLDDFNFYENKE 452
TS+ DDF YE ++
Sbjct: 556 TTSIFDDFAHYEKRQ 570
Score = 50 (22.7 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 34/148 (22%), Positives = 59/148 (39%)
Query: 72 YLPGYDPYSTLVGVDGQCVGQQPYFSSSGYLQHPVSYGSEVMPCYSWDSTYVADIQNGNA 131
Y+P Y Y+ +G +G+ + S++G P+ Y + + + Y+ D
Sbjct: 56 YMPSY--YAPSIGFP-YSLGEAAW-STAG--DQPMPYLTTYGQMSNGEHHYIPDGVFSQP 109
Query: 132 VGFGNEKYGGSTAFAKSNGLNSVKKNGCFTNKVSKSSYTQSTK----------PVSKVTQ 181
GN + F +G N N F+ + S QST+ P S + +
Sbjct: 110 GALGN-----TPPFLGQHGFNFFPGNADFSTWGTSGSQGQSTQSSAYSSSYGYPPSSLGR 164
Query: 182 LDSDLSAGFLKGSNPLGNFSAFSNQKQG 209
+D AGF G++ L S+ +QG
Sbjct: 165 AITDGQAGF--GNDTLSKVPGISSIEQG 190
Score = 48 (22.0 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 218 STNGRMWNGNDRYKSRDKFSRAGGLG 243
+T G+M NG Y FS+ G LG
Sbjct: 88 TTYGQMSNGEHHYIPDGVFSQPGALG 113
>CGD|CAL0002569 [details] [associations]
symbol:orf19.1939 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0002569 EMBL:AACQ01000082 EMBL:AACQ01000081
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 eggNOG:NOG276347
RefSeq:XP_715645.1 RefSeq:XP_715702.1 ProteinModelPortal:Q5A1Q7
GeneID:3642646 GeneID:3642692 KEGG:cal:CaO19.1939
KEGG:cal:CaO19.9494 Uniprot:Q5A1Q7
Length = 364
Score = 337 (123.7 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 65/148 (43%), Positives = 95/148 (64%)
Query: 291 AKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVN 350
+KF+VIKSY+ D++ +++W+ST GN++LD + E +K + IFLFFSVN
Sbjct: 216 SKFFVIKSYNILDVNASFIHNIWTSTELGNRRLDKAYTEL-SKTNNPDVDGKIFLFFSVN 274
Query: 351 GSGQFVGLAEMMGKVDFNKDMDFW-QLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENK 409
SG+F G+AEM +DF + W + +W G FPV+W +IKDVPN +H+ + N+ K
Sbjct: 275 SSGKFCGIAEMKSAIDFTTASNIWCEQTRWKGIFPVEWLLIKDVPNKFFQHLKIPANDYK 334
Query: 410 PVTHSRDTQEIGLKQGLEMLKIFKSYSA 437
VT+SRDTQEI G+ MLKI S+ +
Sbjct: 335 LVTNSRDTQEIPFDIGISMLKIVSSFKS 362
Score = 41 (19.5 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 160 FTNKVSKSSYTQSTKPVSKVTQLDSDL-SAGFLKGSNPLGN-FSAFSNQKQGFFPN 213
F+N S S+ + + +SK+ ++S++ + + +N N +S N+ F N
Sbjct: 66 FSNNQSNSNRYGTPRSLSKLRSIESEIDNLPLVFKTNIWSNDYSVTHNKTANMFAN 121
>UNIPROTKB|Q5A1Q7 [details] [associations]
symbol:CaO19.1939 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0002569 EMBL:AACQ01000082 EMBL:AACQ01000081
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 eggNOG:NOG276347
RefSeq:XP_715645.1 RefSeq:XP_715702.1 ProteinModelPortal:Q5A1Q7
GeneID:3642646 GeneID:3642692 KEGG:cal:CaO19.1939
KEGG:cal:CaO19.9494 Uniprot:Q5A1Q7
Length = 364
Score = 337 (123.7 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 65/148 (43%), Positives = 95/148 (64%)
Query: 291 AKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVN 350
+KF+VIKSY+ D++ +++W+ST GN++LD + E +K + IFLFFSVN
Sbjct: 216 SKFFVIKSYNILDVNASFIHNIWTSTELGNRRLDKAYTEL-SKTNNPDVDGKIFLFFSVN 274
Query: 351 GSGQFVGLAEMMGKVDFNKDMDFW-QLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENK 409
SG+F G+AEM +DF + W + +W G FPV+W +IKDVPN +H+ + N+ K
Sbjct: 275 SSGKFCGIAEMKSAIDFTTASNIWCEQTRWKGIFPVEWLLIKDVPNKFFQHLKIPANDYK 334
Query: 410 PVTHSRDTQEIGLKQGLEMLKIFKSYSA 437
VT+SRDTQEI G+ MLKI S+ +
Sbjct: 335 LVTNSRDTQEIPFDIGISMLKIVSSFKS 362
Score = 41 (19.5 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 160 FTNKVSKSSYTQSTKPVSKVTQLDSDL-SAGFLKGSNPLGN-FSAFSNQKQGFFPN 213
F+N S S+ + + +SK+ ++S++ + + +N N +S N+ F N
Sbjct: 66 FSNNQSNSNRYGTPRSLSKLRSIESEIDNLPLVFKTNIWSNDYSVTHNKTANMFAN 121
>SGD|S000002782 [details] [associations]
symbol:YDR374C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
SGD:S000002782 EMBL:BK006938 EMBL:U28373 KO:K02139
RefSeq:NP_010665.3 GeneID:851983 KEGG:sce:YDR377W
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 RefSeq:NP_010662.3
GeneID:851980 KEGG:sce:YDR374C PIR:S61169 ProteinModelPortal:Q06390
SMR:Q06390 DIP:DIP-5677N IntAct:Q06390 MINT:MINT-514883
STRING:Q06390 EnsemblFungi:YDR374C CYGD:YDR374c eggNOG:NOG276347
GeneTree:ENSGT00390000017549 HOGENOM:HOG000001065 OrthoDB:EOG4K9FMS
NextBio:970124 Genevestigator:Q06390 GermOnline:YDR374C
Uniprot:Q06390
Length = 306
Score = 282 (104.3 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 66/192 (34%), Positives = 110/192 (57%)
Query: 256 NKSASLEISDKKEVLSPTVSRDQYNL-PDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWS 314
+K L+ S K++ + R + P + E ++F+VIKS S + + +WS
Sbjct: 119 SKPRYLQQSTKEQTFNEINKRKSAAIIPPWLNIPENSRFFVIKSSSLKHVKRSFYNGIWS 178
Query: 315 STPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFW 374
ST GNK+L +EA K + +G + +FLFFS+N SG+F G+AEM+ + + D W
Sbjct: 179 STHFGNKRL----SEAYKKLN-SGAK--VFLFFSINTSGRFCGVAEMVSDLKMDLDTSIW 231
Query: 375 QLD-KWNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFK 433
+ + K+ F V+W +++D+ N L+ + +NE KP+THSRDTQEI G+ ++ +FK
Sbjct: 232 EDEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITHSRDTQEIPYSIGISIINLFK 291
Query: 434 SYSAKT-SLLDD 444
+ + S LD+
Sbjct: 292 TQDSDIFSFLDE 303
>RGD|621706 [details] [associations]
symbol:Ythdc1 "YTH domain containing 1" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0016604 "nuclear body"
evidence=IDA] RGD:621706 GO:GO:0016604 GO:GO:0000398
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 CTD:91746
eggNOG:NOG311295 HOGENOM:HOG000088650 HOVERGEN:HBG055528
OrthoDB:EOG4ZW5BC EMBL:D78303 EMBL:AF144731 IPI:IPI00196301
IPI:IPI00213467 RefSeq:NP_596914.1 UniGene:Rn.48752
ProteinModelPortal:Q9QY02 SMR:Q9QY02 STRING:Q9QY02
PhosphoSite:Q9QY02 PRIDE:Q9QY02 GeneID:170956 KEGG:rno:170956
UCSC:RGD:621706 InParanoid:Q9QY02 NextBio:621483
ArrayExpress:Q9QY02 Genevestigator:Q9QY02
GermOnline:ENSRNOG00000001996 Uniprot:Q9QY02
Length = 738
Score = 179 (68.1 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 66/223 (29%), Positives = 101/223 (45%)
Query: 220 NGRMWNGNDRYKSRDKFSRAGGLGMPTELIRGPRAENKSASLEISDKK-EVLSPTVS--- 275
+G +G+D K K RA G+ P R + S S S+KK E LS +V
Sbjct: 290 SGSGTDGSDEKKKERK--RARGIS-PIVFDRS--GSSASESYAGSEKKHEKLSSSVRAVR 344
Query: 276 RDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKAD 335
+DQ + + + A+F++IKS + +++ VWS+ P KKL+ F A +
Sbjct: 345 KDQTS--KLKSVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARS--- 399
Query: 336 ETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKW------NGFFPVKWHV 389
+ L FSV SG+F G A + + W L G F + W
Sbjct: 400 -------VILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWIC 452
Query: 390 IKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIF 432
+++P T H+T NE+KPV RD QEI L+ G ++ +F
Sbjct: 453 RRELPFTKSAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLF 495
>UNIPROTKB|Q96MU7 [details] [associations]
symbol:YTHDC1 "YTH domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
GO:GO:0016604 GO:GO:0000398 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AK056430 EMBL:AC074378 EMBL:BC041119
EMBL:BC053863 EMBL:AB075846 IPI:IPI00144293 IPI:IPI00376222
RefSeq:NP_001026902.1 RefSeq:NP_588611.2 UniGene:Hs.175955 PDB:2YUD
PDBsum:2YUD ProteinModelPortal:Q96MU7 SMR:Q96MU7 IntAct:Q96MU7
STRING:Q96MU7 PhosphoSite:Q96MU7 DMDM:47606762 PaxDb:Q96MU7
PRIDE:Q96MU7 Ensembl:ENST00000344157 Ensembl:ENST00000355665
GeneID:91746 KEGG:hsa:91746 UCSC:uc003hdx.3 UCSC:uc003hdy.3
CTD:91746 GeneCards:GC04M069176 HGNC:HGNC:30626 HPA:HPA036462
HPA:HPA036463 neXtProt:NX_Q96MU7 PharmGKB:PA143485673
eggNOG:NOG311295 HOGENOM:HOG000088650 HOVERGEN:HBG055528
InParanoid:Q96MU7 OMA:VIHKMRH OrthoDB:EOG4ZW5BC PhylomeDB:Q96MU7
ChiTaRS:YTHDC1 EvolutionaryTrace:Q96MU7 GenomeRNAi:91746
NextBio:77419 Bgee:Q96MU7 CleanEx:HS_YTHDC1 Genevestigator:Q96MU7
GermOnline:ENSG00000083896 Uniprot:Q96MU7
Length = 727
Score = 180 (68.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 220 NGRMWNGNDRYKSRDKFSRAGGLGMPTELIRGPRAENKSASLEISDKK-EVLSPTVS--- 275
+G +G+D K K RA G+ P R + S S S+KK E LS +V
Sbjct: 287 SGSGTDGSDEKKKERK--RARGIS-PIVFDRS--GSSASESYAGSEKKHEKLSSSVRAVR 341
Query: 276 RDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKAD 335
+DQ + + ++ A+F++IKS + +++ VWS+ P KKL+ F A +
Sbjct: 342 KDQTSKLKYVLQ--DARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARS--- 396
Query: 336 ETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKW------NGFFPVKWHV 389
+ L FSV SG+F G A + + W L G F + W
Sbjct: 397 -------VILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWIC 449
Query: 390 IKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIF 432
+++P T H+T NE+KPV RD QEI L+ G ++ +F
Sbjct: 450 RRELPFTKSAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLF 492
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 4 SGHAASGMKGEIDQESVGEYGAQNPSTVHYNYYYPGSNGSFSQVDNNGYIHTDGSHSGVH 63
+ ++ K E++ E EYG+ + + GS+GS + NN T+ GV
Sbjct: 163 ASRSSQSSKEEVNSE---EYGSDHET---------GSSGSSDEQGNN----TENEEEGVE 206
Query: 64 SD 65
D
Sbjct: 207 ED 208
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 168 (64.2 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 43/153 (28%), Positives = 76/153 (49%)
Query: 292 KFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNG 351
+++++KS + ++ + +WS+TP+ +KL+ F E+ ++L FSV G
Sbjct: 1196 RYFIMKSSNLQNLDISQQKGIWSTTPSNEQKLNRAFWESSL----------VYLIFSVQG 1245
Query: 352 SGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPV 411
SG F G A M ++ + W G F V+W + +P H+ N+NK V
Sbjct: 1246 SGHFQGFARMSSEIGCEQSQ-CWGSTGLGGVFKVEWIRKESIPFQFTHHLLNPWNDNKEV 1304
Query: 412 THSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDD 444
SRD QE+ + G ++LK++ SA + D+
Sbjct: 1305 QISRDGQELEPQIGEQLLKLWDHTSAVKASTDN 1337
Score = 56 (24.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 64 SDNGSLLYYLPGYDPYSTL 82
SD G++L +LPGYD +L
Sbjct: 530 SDGGAILIFLPGYDEIISL 548
>TAIR|locus:2118046 [details] [associations]
symbol:AT4G11970 "AT4G11970" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 UniGene:At.48848 UniGene:At.68491 IPI:IPI00541281
RefSeq:NP_192934.2 ProteinModelPortal:F4JPV2 SMR:F4JPV2
PRIDE:F4JPV2 EnsemblPlants:AT4G11970.1 GeneID:826804
KEGG:ath:AT4G11970 OMA:GIWATQV PhylomeDB:F4JPV2 Uniprot:F4JPV2
Length = 444
Score = 165 (63.1 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 58/216 (26%), Positives = 98/216 (45%)
Query: 274 VSRDQYNLPDFQVEYEKA----------KFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKL 323
V D+ N PD Q+E KA ++++IKS + D+I ++ +W++ L
Sbjct: 46 VDVDRRNFPD-QLESAKANKNSKPGYRTRYFIIKSLNYDNIQVSVEKGIWATQVMNEPIL 104
Query: 324 DATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQL-----DK 378
+ F+++ G + L FSVN SG F G AEM+ V + +D W +
Sbjct: 105 EGAFHKS-------GR---VILIFSVNMSGFFQGYAEMLSPVGWRRDQ-IWSQGGGKNNP 153
Query: 379 WNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAK 438
W F VKW + ++P H+ N+ KPV SRD QE+ G + ++ + S
Sbjct: 154 WGRSFKVKWLRLSELPFQKTLHLKNPLNDYKPVKISRDCQELPEDIGEALCELLDANSCD 213
Query: 439 TSLLDDFNFYENKERSFHGKKSSKPATLQMDIFNDD 474
LL N + S ++ P++ D +N++
Sbjct: 214 DGLL---NSSSRDDYSTKRSRAEPPSSSGDDEYNNN 246
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 164 (62.8 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 40/142 (28%), Positives = 73/142 (51%)
Query: 292 KFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNG 351
+++++KS + ++ + +WS+TP+ +KL+ F E+ ++L FSV G
Sbjct: 1010 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSM----------VYLVFSVQG 1059
Query: 352 SGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPV 411
SG F G + M ++ K D W G F V+W + +P H+ N+NK V
Sbjct: 1060 SGHFQGFSRMSSEIGREKSQD-WGSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKV 1118
Query: 412 THSRDTQEIGLKQGLEMLKIFK 433
SRD QE+ + G ++L++++
Sbjct: 1119 QISRDGQELEPQVGEQLLQLWE 1140
Score = 54 (24.1 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 63 HS-DNGSLLYYLPGYDPYSTLVGVDGQCVGQQPYFSSSGYLQHPV 106
HS D G++L +LPGYD +VG+ + + F+ + + ++ V
Sbjct: 338 HSCDAGAVLIFLPGYDE---IVGLRDRILFDDKRFADNTHSRYQV 379
>ZFIN|ZDB-GENE-041114-114 [details] [associations]
symbol:ythdc1 "YTH domain containing 1"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-041114-114 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:91746 HOVERGEN:HBG055528 EMBL:BC085378
IPI:IPI00509525 RefSeq:NP_001007411.1 UniGene:Dr.84175
ProteinModelPortal:Q5U3V6 SMR:Q5U3V6 PRIDE:Q5U3V6 GeneID:492769
KEGG:dre:492769 InParanoid:Q5U3V6 NextBio:20865266 Bgee:Q5U3V6
Uniprot:Q5U3V6
Length = 679
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 59/209 (28%), Positives = 93/209 (44%)
Query: 264 SDKK-EVLSPTVS---RDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNG 319
S+KK E LS +V +D+ N + +A+F++IKS + +++ VWS+ P
Sbjct: 270 SEKKHEKLSSSVRDVRKDRIN--KLKHILREARFFLIKSNNHENVSLAKAKGVWSTLPVN 327
Query: 320 NKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLDKW 379
KKL+A F A + + L FSV SG+F G A + + W L
Sbjct: 328 EKKLNAAFRAARS----------VVLIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAG 377
Query: 380 ------NGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFK 433
G F + W +++P T H+ NE+KPV RD QEI + G E+ +F
Sbjct: 378 MNAKMLGGVFKIDWICRRELPFTKTAHLANPWNEHKPVKIGRDGQEIEPECGTELCMLFP 437
Query: 434 SYSAKTSLLDDFNFYENKERSFHGKKSSK 462
+ L + +K R H + S+
Sbjct: 438 -HDESIDLYQVIHKMRHKRR-MHSEPRSR 464
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 164 (62.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 40/142 (28%), Positives = 73/142 (51%)
Query: 292 KFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNG 351
+++++KS + ++ + +WS+TP+ +KL+ F E+ ++L FSV G
Sbjct: 1304 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSM----------VYLVFSVQG 1353
Query: 352 SGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPV 411
SG F G + M ++ K D W G F V+W + +P H+ N+NK V
Sbjct: 1354 SGHFQGFSRMSSEIGREKSQD-WGSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKV 1412
Query: 412 THSRDTQEIGLKQGLEMLKIFK 433
SRD QE+ + G ++L++++
Sbjct: 1413 QISRDGQELEPQVGEQLLQLWE 1434
Score = 52 (23.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 63 HS-DNGSLLYYLPGYD 77
HS D G++L +LPGYD
Sbjct: 633 HSCDAGAILIFLPGYD 648
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 161 (61.7 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 40/142 (28%), Positives = 72/142 (50%)
Query: 292 KFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNG 351
+++++KS + ++ + +WS+TP+ +KL+ F E+ ++L FSV G
Sbjct: 1289 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSI----------VYLVFSVQG 1338
Query: 352 SGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPV 411
SG F G + M ++ K D W G F V+W + +P H+ N+NK V
Sbjct: 1339 SGHFQGFSRMSSEIGREKSQD-WGSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKV 1397
Query: 412 THSRDTQEIGLKQGLEMLKIFK 433
SRD QE+ G ++L++++
Sbjct: 1398 QISRDGQELEPLVGEQLLQLWE 1419
Score = 53 (23.7 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 63 HS-DNGSLLYYLPGYDPYSTLVGVDGQCVGQQPYFSSS 99
HS D G++L +LPGYD +VG+ + + F+ S
Sbjct: 618 HSCDAGAVLIFLPGYDE---IVGLRDRILFDDKRFADS 652
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 164 (62.8 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 40/142 (28%), Positives = 73/142 (51%)
Query: 292 KFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNG 351
+++++KS + ++ + +WS+TP+ +KL+ F E+ ++L FSV G
Sbjct: 1288 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSM----------VYLVFSVQG 1337
Query: 352 SGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPV 411
SG F G + M ++ K D W G F V+W + +P H+ N+NK V
Sbjct: 1338 SGHFQGFSRMSSEIGREKSQD-WGSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKV 1396
Query: 412 THSRDTQEIGLKQGLEMLKIFK 433
SRD QE+ + G ++L++++
Sbjct: 1397 QISRDGQELEPQVGEQLLQLWE 1418
Score = 49 (22.3 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 63 HS-DNGSLLYYLPGYDPYSTLVGVDGQCVGQQPYFSSSGY 101
HS + G++L +LPGYD +VG+ + + F+ + +
Sbjct: 617 HSCEAGAILIFLPGYDE---IVGLRDRILFDDKRFAENAH 653
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 164 (62.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 40/142 (28%), Positives = 73/142 (51%)
Query: 292 KFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNG 351
+++++KS + ++ + +WS+TP+ +KL+ F E+ ++L FSV G
Sbjct: 1235 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSM----------VYLVFSVQG 1284
Query: 352 SGQFVGLAEMMGKVDFNKDMDFWQLDKWNGFFPVKWHVIKDVPNTLLRHITLENNENKPV 411
SG F G + M ++ K D W G F V+W + +P H+ N+NK V
Sbjct: 1285 SGHFQGFSRMSSEIGREKSQD-WGSAGLGGVFKVEWVRKESLPFQFAHHLLNPWNDNKKV 1343
Query: 412 THSRDTQEIGLKQGLEMLKIFK 433
SRD QE+ + G ++L++++
Sbjct: 1344 QISRDGQELEPQVGEQLLQLWE 1365
Score = 41 (19.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 44 FSQVDNNGYIHTDGSHSGVHSDNGSLLYYLPGYD 77
F +D + +HT+GS D L Y +D
Sbjct: 568 FGNLDESSLVHTNGSDLSAE-DRELLKAYHHSFD 600
Score = 39 (18.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 68 SLLYYLPGYD 77
++L +LPGYD
Sbjct: 624 AILIFLPGYD 633
>FB|FBgn0027616 [details] [associations]
symbol:YT521-B "YT521-B" species:7227 "Drosophila
melanogaster" [GO:0016604 "nuclear body" evidence=ISS] [GO:0003723
"RNA binding" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] EMBL:AE014296 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 FlyBase:FBgn0027616 UniGene:Dm.7409 GeneID:38420
KEGG:dme:Dmel_CG12076 CTD:38420 GeneTree:ENSGT00690000102240
GenomeRNAi:38420 NextBio:808571 RefSeq:NP_647811.2
ProteinModelPortal:Q9VZQ1 SMR:Q9VZQ1 IntAct:Q9VZQ1
EnsemblMetazoa:FBtr0073078 UCSC:CG12076-RA InParanoid:Q9VZQ1
OMA:ADYMRNM PhylomeDB:Q9VZQ1 ArrayExpress:Q9VZQ1 Bgee:Q9VZQ1
Uniprot:Q9VZQ1
Length = 721
Score = 148 (57.2 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 74/305 (24%), Positives = 118/305 (38%)
Query: 137 EKYGGSTAFAKSNGLNSVKKNGCFTNKVSKSSYTQSTKPVSKVTQLDSDLSAGFLKGSNP 196
E GG +G + SKS T+ +P +K ++ +A G
Sbjct: 113 ELNGGKKKKRTDSGTKKTTSSEASDKVKSKSPDTEDRQPSAKKSRTKIPSNANDSAGHK- 171
Query: 197 LGNFSAFSNQKQGFFPNMVNYSTNGRMWNGNDRYKSRDKFSRAGGLGMPTELIRGPRAEN 256
+ S ++K P + + S + +G ++ GG G RG + +
Sbjct: 172 -SDLSEAEDEKPSL-PTLESDSESSDSDSGTQHKRNG---GNGGGNG------RG-KPSS 219
Query: 257 KSASLEISDKKEVLSPTVSRDQ--YN-LPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVW 313
KS++ E K V T S Q Y+ + + +F++IKS + D++ VW
Sbjct: 220 KSSTPE---KDSVGGGTHSHSQKGYDYMTKLNYLFRDTRFFLIKSNNSDNVQLSKNKSVW 276
Query: 314 SSTPNGNKKLDATFNEAEAKADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDF 373
++ P + L+ F EA + L FSVN SG+F G A M +
Sbjct: 277 ATLPQNDANLNQAFKEARN----------VLLIFSVNESGKFAGFARMAAPSRRDIPQVA 326
Query: 374 WQLDK------WNGFFPVKWHVIKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLE 427
W L G + W K++ H+ NE KPV RD QEI K G E
Sbjct: 327 WVLPPSISPKALGGVIELDWICRKELSFNATLHLHNTWNEGKPVKIGRDGQEIEPKIGGE 386
Query: 428 MLKIF 432
+ ++F
Sbjct: 387 LCRLF 391
>TAIR|locus:2028175 [details] [associations]
symbol:CPSF30 "AT1G30460" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=ISS] [GO:0006396 "RNA processing" evidence=RCA;IDA;TAS]
[GO:0004519 "endonuclease activity" evidence=IDA] [GO:0004521
"endoribonuclease activity" evidence=IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP] [GO:0006979 "response to oxidative
stress" evidence=IMP] [GO:1900363 "regulation of mRNA
polyadenylation" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006397 "mRNA processing" evidence=RCA]
InterPro:IPR000571 PROSITE:PS50103 SMART:SM00356 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006979 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006378 EMBL:AC009917 GO:GO:0003723
GO:GO:0005516 GO:GO:0004521 eggNOG:COG5084 GO:GO:0005847 KO:K14404
EMBL:EU250988 EMBL:AY140901 IPI:IPI00527840 IPI:IPI00846485
PIR:B86429 PIR:C86429 RefSeq:NP_001077629.1 RefSeq:NP_174334.2
UniGene:At.40546 UniGene:At.69479 ProteinModelPortal:A9LNK9
SMR:A9LNK9 IntAct:A9LNK9 STRING:A9LNK9 PaxDb:A9LNK9 PRIDE:A9LNK9
EnsemblPlants:AT1G30460.1 GeneID:839925 KEGG:ath:AT1G30460
TAIR:At1g30460 HOGENOM:HOG000242019 InParanoid:A9LNK9 OMA:AKMTSRI
PhylomeDB:A9LNK9 ProtClustDB:CLSN2714254 Genevestigator:A9LNK9
GO:GO:1900363 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
Uniprot:A9LNK9
Length = 631
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 64/288 (22%), Positives = 120/288 (41%)
Query: 216 NYSTNGRMWNG-NDRYKSRDK-FSRAGGLGMPTELIRGPRAENKSASLEISDKKEVLSPT 273
NY TN R++ N + +D+ + G P E + + + + L P
Sbjct: 162 NYGTN-RLYQARNVAPQLQDRPQGQVPMQGQPQESGNLQQQQQQQPQQSQHQVSQTLIPN 220
Query: 274 VSRDQYNLPDFQVEYEKAKFYVIKSYSEDDIHKCIKYDVWSSTPNGNKKLDATFNEAEAK 333
+ DQ N + +++V+KS + ++ ++ VW++ + KL+ F+ E
Sbjct: 221 PA-DQTNRTSHPLPQGVNRYFVVKSNNRENFELSVQQGVWATQRSNEAKLNEAFDSVEN- 278
Query: 334 ADETGTRCPIFLFFSVNGSGQFVGLAEMMGKVDFNKDMDFWQLD----KWNGFFPVKWHV 389
+ L FSVN + F G A+M ++ W+ + ++ F VKW
Sbjct: 279 ---------VILIFSVNRTRHFQGCAKMTSRIGGYIGGGNWKHEHGTAQYGRNFSVKWLK 329
Query: 390 IKDVPNTLLRHITLENNENKPVTHSRDTQEIGLKQGLEMLKIFKSYSAKTSLLDDFNFYE 449
+ ++ R++ NEN PV SRD QE+ G ++ + Y S L +
Sbjct: 330 LCELSFHKTRNLRNPYNENLPVKISRDCQELEPSVGEQLASLL--YLEPDSELMAISIAA 387
Query: 450 NKERSFHGKKSSKPATL--QMDI--FNDDDFTKQIKSAEKEFDEDSIS 493
+R K P + DI F D++ ++ + E E +E+S++
Sbjct: 388 EAKREEEKAKGVNPESRAENPDIVPFEDNEEEEE-EEDESEEEEESMA 434
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.131 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 528 528 0.00091 119 3 11 23 0.47 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 614 (65 KB)
Total size of DFA: 323 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 52.31u 0.13s 52.44t Elapsed: 00:00:02
Total cpu time: 52.31u 0.13s 52.44t Elapsed: 00:00:02
Start: Tue May 21 05:53:23 2013 End: Tue May 21 05:53:25 2013