Query 009698
Match_columns 528
No_of_seqs 221 out of 1547
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 16:16:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009698.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009698hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0228 Beta-fructofuranosidas 100.0 1E-102 3E-107 793.5 34.8 515 3-518 46-570 (571)
2 COG1621 SacC Beta-fructosidase 100.0 1.4E-97 3E-102 779.3 45.6 446 1-517 23-486 (486)
3 TIGR01322 scrB_fam sucrose-6-p 100.0 1.1E-88 2.4E-93 726.3 47.2 422 3-486 10-445 (445)
4 smart00640 Glyco_32 Glycosyl h 100.0 3.6E-84 7.7E-89 689.8 48.5 419 11-475 1-437 (437)
5 PF00251 Glyco_hydro_32N: Glyc 100.0 1.2E-73 2.5E-78 583.5 29.1 296 11-326 1-308 (308)
6 cd08996 GH32_B_Fructosidase Gl 100.0 5.6E-65 1.2E-69 517.5 32.0 290 16-329 1-298 (298)
7 cd08995 GH32_Aec43_like Glycos 100.0 1.1E-53 2.5E-58 430.7 29.3 265 20-319 3-278 (280)
8 cd08979 GH_J Glycosyl hydrolas 100.0 3.6E-37 7.9E-42 308.6 27.3 236 27-291 14-264 (276)
9 cd08772 GH43_62_32_68 Glycosyl 100.0 3.7E-33 8E-38 280.2 27.2 270 22-312 5-285 (286)
10 cd08997 GH68 Glycosyl hydrolas 99.9 1.5E-24 3.3E-29 221.6 23.5 186 25-216 17-256 (349)
11 cd08994 GH43_like_2 Glycosyl h 99.9 1.1E-20 2.4E-25 191.6 19.4 184 20-214 83-290 (291)
12 cd08993 GH43_DUF377 Glycosyl h 99.8 2.1E-19 4.5E-24 180.2 18.6 150 19-187 2-159 (268)
13 cd08984 GH43_5 Glycosyl hydrol 99.8 4.7E-19 1E-23 180.0 18.9 159 20-204 82-246 (294)
14 cd09004 GH43_bXyl Glycosyl hyd 99.8 2.4E-17 5.2E-22 165.8 20.1 180 15-215 5-186 (275)
15 cd08994 GH43_like_2 Glycosyl h 99.8 4.2E-17 9.2E-22 165.3 20.4 195 11-214 5-223 (291)
16 cd08999 GH43_ABN_2 Glycosyl hy 99.7 1.8E-15 3.8E-20 153.0 22.2 179 20-215 11-198 (287)
17 cd08990 GH43_AXH_like Glycosyl 99.6 4.9E-15 1.1E-19 149.0 18.0 182 21-215 4-195 (274)
18 cd08992 GH43_like_1 Glycosyl h 99.6 1.1E-13 2.4E-18 141.8 18.2 169 6-182 23-241 (349)
19 cd08978 GH_F Glycosyl hydrolas 99.6 2.3E-13 5.1E-18 135.7 20.3 178 21-215 4-190 (271)
20 cd08991 GH43_bXyl_2 Glycosyl h 99.5 6.2E-13 1.4E-17 135.0 21.0 175 21-214 4-201 (294)
21 cd08984 GH43_5 Glycosyl hydrol 99.5 1.1E-12 2.4E-17 133.3 17.7 166 20-204 14-193 (294)
22 cd08998 GH43_ABN_1 Glycosyl hy 99.5 4.6E-12 9.9E-17 128.4 20.9 174 20-214 4-190 (288)
23 PF04041 DUF377: Domain of unk 99.4 4E-13 8.7E-18 137.2 11.3 163 17-197 32-201 (312)
24 cd08985 GH43_6 Glycosyl hydrol 99.4 2.4E-11 5.2E-16 121.7 18.8 175 20-214 6-187 (265)
25 cd08992 GH43_like_1 Glycosyl h 99.3 1.6E-10 3.5E-15 118.6 19.6 167 20-204 115-310 (349)
26 cd08979 GH_J Glycosyl hydrolas 99.3 9.3E-11 2E-15 117.3 14.9 132 20-161 69-209 (276)
27 cd09003 GH43_AXH_1 Glycosyl hy 99.3 2.2E-10 4.8E-15 117.4 17.6 180 20-215 12-214 (311)
28 PF08244 Glyco_hydro_32C: Glyc 99.2 5.2E-11 1.1E-15 98.4 10.3 73 395-475 10-86 (86)
29 cd09000 GH43_XYL_1 Glycosyl hy 99.2 5.4E-10 1.2E-14 113.2 18.3 171 20-214 11-194 (288)
30 cd08983 GH43_4 Glycosyl hydrol 99.2 8.7E-10 1.9E-14 111.1 18.0 165 20-204 21-195 (276)
31 PF04616 Glyco_hydro_43: Glyco 99.2 1.4E-09 3E-14 109.6 19.4 175 20-214 13-197 (286)
32 cd08981 GH43_2 Glycosyl hydrol 99.1 4E-09 8.8E-14 107.1 17.9 130 20-160 9-142 (291)
33 cd08988 GH43_ABN Glycosyl hydr 99.0 1.1E-08 2.4E-13 103.3 18.1 175 21-214 4-191 (279)
34 cd08993 GH43_DUF377 Glycosyl h 99.0 4.1E-09 8.9E-14 105.7 13.8 98 79-185 3-104 (268)
35 cd08989 GH43_XYL Glycosyl hydr 98.9 4.1E-08 9E-13 98.6 17.4 169 20-215 11-188 (269)
36 COG2152 Predicted glycosylase 98.9 1.4E-08 3E-13 100.3 13.1 154 17-186 31-192 (314)
37 cd09001 GH43_XYL_2 Glycosyl hy 98.8 1E-07 2.2E-12 95.8 16.4 163 20-215 14-190 (269)
38 cd08980 GH43_1 Glycosyl hydrol 98.8 3.4E-07 7.3E-12 92.8 19.1 176 21-215 4-193 (288)
39 cd08986 GH43_7 Glycosyl hydrol 98.7 3.7E-07 8E-12 91.7 15.8 173 20-215 5-201 (269)
40 cd08995 GH32_Aec43_like Glycos 98.7 3.8E-07 8.2E-12 92.0 14.5 129 20-161 65-200 (280)
41 cd09002 GH43_XYL_3 Glycosyl hy 98.7 9.4E-07 2E-11 89.3 17.3 117 20-160 18-134 (280)
42 PF02435 Glyco_hydro_68: Levan 98.6 8.8E-07 1.9E-11 92.4 15.0 176 25-204 72-309 (428)
43 cd08982 GH43_3 Glycosyl hydrol 98.5 7.1E-06 1.5E-10 83.5 18.6 157 20-215 6-179 (295)
44 PF04041 DUF377: Domain of unk 98.5 5E-07 1.1E-11 92.5 9.5 107 72-187 28-137 (312)
45 cd08999 GH43_ABN_2 Glycosyl hy 98.5 2.9E-06 6.3E-11 85.6 15.0 151 20-183 65-226 (287)
46 cd08978 GH_F Glycosyl hydrolas 98.5 3.7E-06 8.1E-11 83.7 15.3 150 20-182 62-215 (271)
47 cd08983 GH43_4 Glycosyl hydrol 98.4 5E-07 1.1E-11 91.1 8.4 88 124-214 4-97 (276)
48 cd08990 GH43_AXH_like Glycosyl 98.4 5.8E-06 1.3E-10 83.1 14.8 146 20-185 67-219 (274)
49 cd08772 GH43_62_32_68 Glycosyl 98.4 8.3E-06 1.8E-10 81.6 15.4 151 20-182 63-224 (286)
50 cd08987 GH62 Glycosyl hydrolas 98.4 2.1E-05 4.6E-10 78.2 17.1 188 12-239 14-217 (303)
51 cd08991 GH43_bXyl_2 Glycosyl h 98.3 1.8E-05 3.9E-10 80.3 15.9 150 20-182 58-227 (294)
52 cd08996 GH32_B_Fructosidase Gl 98.3 6.9E-06 1.5E-10 83.5 12.7 129 22-161 68-201 (298)
53 cd08986 GH43_7 Glycosyl hydrol 98.1 2.5E-05 5.4E-10 78.5 12.5 73 140-215 2-97 (269)
54 cd08998 GH43_ABN_1 Glycosyl hy 98.1 6.3E-05 1.4E-09 76.2 15.5 146 20-180 61-217 (288)
55 COG2152 Predicted glycosylase 98.1 1.5E-05 3.2E-10 79.1 8.9 117 63-188 12-141 (314)
56 TIGR01322 scrB_fam sucrose-6-p 98.0 6.3E-05 1.4E-09 81.1 13.0 131 21-161 90-225 (445)
57 PF04616 Glyco_hydro_43: Glyco 98.0 6.6E-05 1.4E-09 75.6 12.1 147 21-181 71-221 (286)
58 cd08997 GH68 Glycosyl hydrolas 97.9 0.00021 4.5E-09 74.0 14.6 143 26-177 81-279 (349)
59 cd09004 GH43_bXyl Glycosyl hyd 97.9 0.00039 8.4E-09 69.9 16.3 137 20-183 69-212 (275)
60 cd08985 GH43_6 Glycosyl hydrol 97.9 0.00061 1.3E-08 68.3 17.0 143 20-185 68-215 (265)
61 cd08989 GH43_XYL Glycosyl hydr 97.8 3.3E-05 7.1E-10 77.6 7.1 77 126-215 1-86 (269)
62 cd09002 GH43_XYL_3 Glycosyl hy 97.8 0.0003 6.4E-09 71.1 13.6 76 125-214 7-82 (280)
63 smart00640 Glyco_32 Glycosyl h 97.8 0.00014 3E-09 78.2 11.3 131 22-161 74-215 (437)
64 cd08981 GH43_2 Glycosyl hydrol 97.7 0.00045 9.7E-09 70.3 12.6 67 138-204 4-77 (291)
65 cd08988 GH43_ABN Glycosyl hydr 97.6 0.0015 3.3E-08 65.9 15.3 141 20-177 60-214 (279)
66 cd09001 GH43_XYL_2 Glycosyl hy 97.6 0.0013 2.8E-08 66.0 14.4 130 20-181 79-212 (269)
67 cd09003 GH43_AXH_1 Glycosyl hy 97.5 0.0044 9.5E-08 63.6 17.0 147 20-187 81-249 (311)
68 cd09000 GH43_XYL_1 Glycosyl hy 97.4 0.0046 1E-07 62.6 15.0 140 20-182 71-219 (288)
69 cd08980 GH43_1 Glycosyl hydrol 97.3 0.0068 1.5E-07 61.3 15.5 139 20-161 116-260 (288)
70 COG3507 XynB Beta-xylosidase [ 97.3 0.0018 4E-08 69.4 11.2 151 47-215 55-224 (549)
71 PF13088 BNR_2: BNR repeat-lik 97.1 0.021 4.6E-07 56.9 16.4 157 26-204 58-217 (275)
72 cd00260 Sialidase Sialidases o 96.9 0.025 5.3E-07 58.8 15.6 151 18-184 77-240 (351)
73 PF13088 BNR_2: BNR repeat-lik 96.9 0.25 5.5E-06 49.1 21.7 161 27-204 1-168 (275)
74 cd08987 GH62 Glycosyl hydrolas 96.8 0.035 7.6E-07 55.6 14.0 141 20-182 81-230 (303)
75 cd08982 GH43_3 Glycosyl hydrol 96.5 0.024 5.3E-07 57.7 11.3 79 75-159 159-238 (295)
76 PF00251 Glyco_hydro_32N: Glyc 96.0 0.071 1.5E-06 54.6 11.7 114 21-146 73-190 (308)
77 PF03664 Glyco_hydro_62: Glyco 95.9 0.38 8.1E-06 46.8 15.3 169 12-204 16-195 (271)
78 cd00260 Sialidase Sialidases o 92.0 10 0.00022 39.1 17.6 170 20-204 19-207 (351)
79 PF13859 BNR_3: BNR repeat-lik 91.8 0.7 1.5E-05 47.4 8.4 138 25-185 68-216 (310)
80 COG3507 XynB Beta-xylosidase [ 91.3 2.3 5.1E-05 46.2 11.9 142 20-177 94-243 (549)
81 COG3940 Predicted beta-xylosid 90.8 1.4 3.1E-05 41.9 8.7 104 21-131 136-248 (324)
82 PF13810 DUF4185: Domain of un 84.1 28 0.0006 35.9 14.2 155 20-186 98-276 (316)
83 PTZ00334 trans-sialidase; Prov 77.8 14 0.0003 42.5 10.1 85 79-182 263-349 (780)
84 PF13810 DUF4185: Domain of un 77.3 10 0.00022 39.0 8.3 96 83-184 101-211 (316)
85 PF02435 Glyco_hydro_68: Levan 75.5 83 0.0018 33.7 14.5 127 26-161 143-319 (428)
86 PF00337 Gal-bind_lectin: Gala 56.6 60 0.0013 28.4 7.9 30 450-480 78-107 (133)
87 PF03664 Glyco_hydro_62: Glyco 52.8 2.4E+02 0.0053 27.9 13.7 140 20-183 79-230 (271)
88 COG1621 SacC Beta-fructosidase 40.6 1.5E+02 0.0032 32.5 9.1 117 21-146 105-224 (486)
89 PF06905 FAIM1: Fas apoptotic 32.6 45 0.00097 31.3 3.2 31 457-488 108-138 (177)
90 smart00276 GLECT Galectin. Gal 30.9 2.4E+02 0.0051 24.5 7.5 30 450-480 72-101 (128)
91 PF02012 BNR: BNR/Asp-box repe 30.8 40 0.00087 17.2 1.4 11 108-122 2-12 (12)
92 KOG0228 Beta-fructofuranosidas 27.0 2.2E+02 0.0049 31.1 7.5 91 85-184 68-168 (571)
93 PF06439 DUF1080: Domain of Un 26.0 4.3E+02 0.0092 24.0 8.8 29 453-482 126-154 (185)
94 cd00070 GLECT Galectin/galacto 25.5 1.1E+02 0.0024 26.6 4.4 30 449-479 72-101 (127)
No 1
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-102 Score=793.52 Aligned_cols=515 Identities=49% Similarity=0.863 Sum_probs=453.8
Q ss_pred CCcccccceecc-cCcccceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCCCCCCcEEEeeE
Q 009698 3 RNTFSLGYHLCD-ENSMIAGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 81 (528)
Q Consensus 3 ~~~~Rp~~H~~p-~gw~Nng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~d~~gv~sGs~ 81 (528)
+.++||.|||+| .|||| |+.|++|.|||||||||.+..||+++||||||+||+||+.+|+||.|++++|.+|||||||
T Consensus 46 n~~~Rp~~HFqP~k~wMN-~P~~ykG~yHLFyQyNP~gavwg~ivWGHavSkDLinW~~lp~Ai~Ps~~~ding~wSGSa 124 (571)
T KOG0228|consen 46 NQPDRPGFHFQPPKGWMN-DPMYYKGKYHLFYQYNPKGAVWGNIVWGHAVSKDLINWEALPPAIAPSEWFDINGCWSGSA 124 (571)
T ss_pred cccCCceeecCCCccccc-CccccCcEEEEEEecCCCCceeeeeEeeeecchhhccccccCcccCCCCccccCccccceE
Confidence 568999999999 99999 7799999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCeEEEEeccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCC--CCCCCCCccCCeeEEEcCCCcEEEEEE
Q 009698 82 TILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIG 159 (528)
Q Consensus 82 v~~~~g~~~~~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~--~~~~~~~~RDP~V~~~~~~g~~~m~~g 159 (528)
+++++|..+++|||...+..|.|.+|+..|.+|+.|+.|.|.++||++.++ .+.+...||||+++|+.++|+|+|++|
T Consensus 125 ti~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dgkWrm~vg 204 (571)
T KOG0228|consen 125 TIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDGKWRMTVG 204 (571)
T ss_pred EEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCChhhccCCceeeecCCCcEEEEEE
Confidence 999999999999999887789999999999999999999999999999987 677788999999999999999999999
Q ss_pred eecCCeeEEEEEEcCCCCCCeecccccccCCCCCeeeEeeEEEeeecCccceeecCCCCCeEEEEeeecCCCcceEEEEE
Q 009698 160 SKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 239 (528)
Q Consensus 160 ~~~~~~G~i~ly~S~DL~~W~~~~~l~~~~~~~g~wECPdlf~l~~~g~~~l~~~~~g~~~~~vl~~s~~~~~~~~Y~vG 239 (528)
+..+.+|.+++|+|+|+++|+....+.+.....|||||||||++...|.+++..+..++..|+|+..|++++...+|+||
T Consensus 205 sk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~~d~Y~IG 284 (571)
T KOG0228|consen 205 SKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGLDWSLFGSINKHVLKASLGGTSNDQYFIG 284 (571)
T ss_pred eecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCceEEEeccccccccccccCCceeEEEEEe
Confidence 98778899999999999999999988887677789999999999999999999988888889999999999889999999
Q ss_pred EEcCCCCeeccCCCCcccccceeeccCCCccceeeecCCCCcEEEEEEccCCCCCCCCcCCCCcccCcccEEEEEecCCC
Q 009698 240 TYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTG 319 (528)
Q Consensus 240 ~~d~~~~~f~~~~~~~d~g~~~~lD~G~fYA~~tf~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPRel~l~~~~g 319 (528)
+||+++.+|+|+....+.....+.|||.|||.|||.|..++|||+|||++++++.....+.||+|.||+||++.|++..+
T Consensus 285 ~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es~~~~dd~~kgw~g~qtipRki~Ld~~s~ 364 (571)
T KOG0228|consen 285 TYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASESDYTNDDPTKGWRGLQTIPRKIWLDTESG 364 (571)
T ss_pred cccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccCcccccchhcccccccccceEEEeeccCC
Confidence 99998889999877666544567899999999999998899999999999999988888999999999999999997556
Q ss_pred ceEEeechHHHHhhhccceeeeeEEEcCCceeeeccccceeEEEEEEEEEE-eccccc-----cccceeec-CCcccccc
Q 009698 320 SNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE-LLGSGA-----MEEGYGCS-GGAIDRSA 392 (528)
Q Consensus 320 ~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~-l~~~~~-----~~~~~~~~-~~~~~~~~ 392 (528)
..|.|.|+.|++.||.......+..+.+++...+....+.+.+++..|+++ |+.... .+-.+.|. .+...++.
T Consensus 365 k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~~~Leka~~~~~~~t~~~~~c~~~~~~v~~~ 444 (571)
T KOG0228|consen 365 KQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEVEDLEKAIVIEPSWTDPQFLCLTGGSSVREG 444 (571)
T ss_pred CcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEecccccccccCccccccceeeecCCcccccC
Confidence 789999999999999988776666777888777777788888888888776 443211 11234564 34445566
Q ss_pred ccceEEEEEEcCCCCceEEEEEEeccCCCCCeeEEEeecCCCCCCCCccccccceEEeeecCCeEEEEEEEeCCeEEEEE
Q 009698 393 MGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFG 472 (528)
Q Consensus 393 ~~~~gl~v~~~~~~~~~t~i~~~~~~~~~g~~~~~~~Dr~rs~~~~~~~~~~~g~~~~~~~~~~~~LrIfvD~S~iEVF~ 472 (528)
.++|||+++++.+.+|+|.+.|.+.+...+-....|-|.++|++..+..+..++..+++...+++.||++||+|+||.|+
T Consensus 445 ~gpfgl~~la~~dl~eyt~v~f~i~k~~~~~~v~~csd~~~sSl~~d~~k~~~~afvdv~~~~~islr~LiDhsivEsyg 524 (571)
T KOG0228|consen 445 LGPFGLMVLASSDLEEYTPVGFRIFKAKKKYVVLMCSDQSRSSLAEDNYKPSIGAFVDVYPHQKISLRSLIDHSIVESYG 524 (571)
T ss_pred CCcceEEEEeecCcccceeeeEEEeecCCcceeEEeccCCCccccccccccceeeEEEecCCCccchhhhhhhhhHHHhc
Confidence 78999999999999999999999988655436668888899998877766666777777667899999999999999999
Q ss_pred eCCceEEEEeeecCccccCccEEEEEecCCCceEEEEEEEeecccc
Q 009698 473 QGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSA 518 (528)
Q Consensus 473 N~G~~~~T~rvyp~~~~~~~~~i~~~~~~~~~~~~~~~~~w~m~s~ 518 (528)
|+|+.|+|+|+||..+..+++.+++|+++.......++.+|+|+++
T Consensus 525 ~~G~t~iTsrvyp~~ai~~~~~lf~fn~g~~~v~v~sl~aw~m~~~ 570 (571)
T KOG0228|consen 525 NGGKTVITSRVYPTLAIGEGAHLFVFNNGSQLVNVTSLNAWSMKNA 570 (571)
T ss_pred cCCcEEEEeeeeeeecccccceEEEecccccceEEEEeehhhcccC
Confidence 9999999999999998877888999887655433239999999876
No 2
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-97 Score=779.34 Aligned_cols=446 Identities=32% Similarity=0.607 Sum_probs=348.8
Q ss_pred CCCCcccccceecc-cCccc--ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCCCCCCcEE
Q 009698 1 MCRNTFSLGYHLCD-ENSMI--AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVW 77 (528)
Q Consensus 1 ~~~~~~Rp~~H~~p-~gw~N--ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~d~~gv~ 77 (528)
|.+.+|||.|||+| .|||| ||++|++|+|||||||+|+++.||+||||||+|+|||||+++|+||.|+.++|.+|||
T Consensus 23 ~~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~y 102 (486)
T COG1621 23 VAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGCY 102 (486)
T ss_pred ccCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCccccCCce
Confidence 34689999999999 99999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeEEEccCCeEEEEeccCCC----CCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCc
Q 009698 78 TGSATILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGK 153 (528)
Q Consensus 78 sGs~v~~~~g~~~~~YTg~~~----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~ 153 (528)
|||||+ .+|.+.+||||+.+ .+.+.||+|+|+|+ .+|+|+.+|||+..|+++ +.+||||||+|+ ++|+
T Consensus 103 SGSAV~-~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~~~ 174 (486)
T COG1621 103 SGSAVV-DDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EGGK 174 (486)
T ss_pred eeeEEE-eCCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CCCc
Confidence 999986 68999999999875 24679999999995 799998779999988887 789999997796 8899
Q ss_pred EEEEEEee-cCCeeEEEEEEcCCCCCCeecccccccCCCCC-eeeEeeEEEeeecCccceeecCCCCCeEEEEeeecCC-
Q 009698 154 WRLTIGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD- 230 (528)
Q Consensus 154 ~~m~~g~~-~~~~G~i~ly~S~DL~~W~~~~~l~~~~~~~g-~wECPdlf~l~~~g~~~l~~~~~g~~~~~vl~~s~~~- 230 (528)
|+|++||+ .+..|+|+||+|+||++|++.|+|..+.+..+ ||||||||+|++ ..++.+|++| .+.++
T Consensus 175 ~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~--~~~~~~~pqg--------~~~~~~ 244 (486)
T COG1621 175 WWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDG--EDVLLFWPQG--------LSINGG 244 (486)
T ss_pred EEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecC--cCceEEccee--------eecCCC
Confidence 99999998 57789999999999999999999987644444 999999999984 4556666554 22222
Q ss_pred ----CcceEEEEEEEcCCCCeeccCCCCcccccceeeccC-CCccceeeecCCCCcEEEEEEccCCCCC--CCCcCCCCc
Q 009698 231 ----TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTE--SDDLEKGWA 303 (528)
Q Consensus 231 ----~~~~~Y~vG~~d~~~~~f~~~~~~~d~g~~~~lD~G-~fYA~~tf~~~~~gr~i~~gW~~~~~~~--~~~~~~gW~ 303 (528)
.....|++|+||++ +|+....+ ..+||+| ||||||||.++ ++|||++|||++|+++ +|+..++|+
T Consensus 245 ~~~n~~~~~Y~vG~~dg~--~f~~~~~~-----~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w~ 316 (486)
T COG1621 245 EYDNIYQSGYFVGDFDGK--EFKLDDGQ-----FRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGWR 316 (486)
T ss_pred cCCCcceeEEEEEeeccc--eeEecCCC-----ceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCcC
Confidence 12357999999987 56554332 4689999 99999999996 8999999999999987 778888999
Q ss_pred ccCcccEEEEEecCCCceEEeechHHHHhhhccceeeeeEEEcCCceeeeccccceeEEEEEEEEEEeccccccccceee
Q 009698 304 SVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGC 383 (528)
Q Consensus 304 g~lslPRel~l~~~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~l~~~~~~~~~~~~ 383 (528)
|||||||||+|+ +| +|+|+|++||++||.+...+.+..++.. ..+....+.++++. +.+ ....+
T Consensus 317 ~~mTlpRel~l~--~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~--~~l~~~~~~~~~l~--~~~--~~~~~------- 380 (486)
T COG1621 317 GAMTLPRELTLE--DG-KLYQTPVRELESLRKPEEAAHNTTLSGN--SKLELPSGDAYELD--LDL--IWTDA------- 380 (486)
T ss_pred ccceeeEEEEEc--CC-eEEecchHHHHhhhcccccccccccccc--eeeeccCCccEEEE--EEe--ecccc-------
Confidence 999999999995 34 8999999999999998666666665554 22333344444442 222 11110
Q ss_pred cCCccccccccceEEEEEEcCCCCceEEEEEEeccCCCCCeeEEEeecCCCCCCCCccccccce-EEeeecCCeEEEEEE
Q 009698 384 SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGS-KVPVLQGEKLSMRIL 462 (528)
Q Consensus 384 ~~~~~~~~~~~~~gl~v~~~~~~~~~t~i~~~~~~~~~g~~~~~~~Dr~rs~~~~~~~~~~~g~-~~~~~~~~~~~LrIf 462 (528)
..+|+.++.+.. .+.++.. ...+++||++| ..+....... .+.+....+++||||
T Consensus 381 ----------~~~~~~l~~~~~-----~~~~~~~------~~~l~ldR~~s---~~f~~~~~~~r~~~~~~~~~v~l~if 436 (486)
T COG1621 381 ----------TSFGLELRMGLN-----LVGYDVE------NETLTLDRSDS---PLFTVQDGETRECFIENGAKVHLRIF 436 (486)
T ss_pred ----------ceEEEEeecCcc-----eeccccc------cceEEEecccc---ccccccCCceeeeccCCCceEEEEEE
Confidence 125677665442 2223222 12478999877 1111111111 223333445899999
Q ss_pred EeCCeEEEEEeCCceEEEEeeecCccccCccEEEEEecCCCceEEEEEEEeeccc
Q 009698 463 VDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNS 517 (528)
Q Consensus 463 vD~S~iEVF~N~G~~~~T~rvyp~~~~~~~~~i~~~~~~~~~~~~~~~~~w~m~s 517 (528)
||+|+||||+|+|+.|+|+|+||..+ ..+|.+.+..+. +.+..++|.|++
T Consensus 437 ~D~ssvEiF~NdGe~v~T~rifp~~~---~~~i~l~~~~g~--~~~~~~~~~l~~ 486 (486)
T COG1621 437 VDNSSVEIFINDGEKVFTSRIFPTPD---ANGISLYSDQGV--AVVQNTIWPLKS 486 (486)
T ss_pred EeCCeEEEEEcCCceEEEEEecCCCc---ccceEEEccCce--EEEEeeeeccCC
Confidence 99999999999999999999999975 457888765433 334558898864
No 3
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=100.00 E-value=1.1e-88 Score=726.34 Aligned_cols=422 Identities=29% Similarity=0.518 Sum_probs=325.9
Q ss_pred CCcccccceecc-cCccc--ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCCCCCCcEEEe
Q 009698 3 RNTFSLGYHLCD-ENSMI--AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTG 79 (528)
Q Consensus 3 ~~~~Rp~~H~~p-~gw~N--ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~d~~gv~sG 79 (528)
+++|||+|||+| .|||| ||++|++|+||||||++|+++.||+++||||+|+|||||+++|+||.|+..||+.|||||
T Consensus 10 ~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~sG 89 (445)
T TIGR01322 10 QSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCYSG 89 (445)
T ss_pred cCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCceEEC
Confidence 478999999999 99999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEccCCeEEEEeccCCC----CCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEE
Q 009698 80 SATILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWR 155 (528)
Q Consensus 80 s~v~~~~g~~~~~YTg~~~----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~ 155 (528)
||++ .+|+++|||||+.+ ...+.|++|+|+|+ .+|+|.+ +|||.+++.....+||||+| |+ .+|+||
T Consensus 90 sav~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~~~ 160 (445)
T TIGR01322 90 SAVD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGHWY 160 (445)
T ss_pred eEEe-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCEEE
Confidence 9986 68999999999753 23578999999985 6999984 59998654434568999999 54 578999
Q ss_pred EEEEeec-CCeeEEEEEEcCCCCCCeecccccccC----CCCC-eeeEeeEEEeeecCccceeecCCCCCeEEEEeeecC
Q 009698 156 LTIGSKI-GKTGISLVYQTTDFKTYELLDEYLHAV----PGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 229 (528)
Q Consensus 156 m~~g~~~-~~~G~i~ly~S~DL~~W~~~~~l~~~~----~~~g-~wECPdlf~l~~~g~~~l~~~~~g~~~~~vl~~s~~ 229 (528)
|++|++. +..|++++|+|+||++|++.+++.... ...+ |||||+||+|+ ++++|++|++|....- ....
T Consensus 161 M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~k~vL~~s~~g~~~~~---~~~~ 235 (445)
T TIGR01322 161 MVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--GQDVLLFSPQGLDASG---YDYQ 235 (445)
T ss_pred EEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--CcEEEEEeccccCccc---cccc
Confidence 9999874 456899999999999999999986542 2234 99999999997 5677777776521100 0000
Q ss_pred CCcceEEEEEEEcCCCCeeccCCCCcccccceeeccC-CCccceeeecCCCCcEEEEEEccCCCCCCCCcCCCCcccCcc
Q 009698 230 DTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTI 308 (528)
Q Consensus 230 ~~~~~~Y~vG~~d~~~~~f~~~~~~~d~g~~~~lD~G-~fYA~~tf~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lsl 308 (528)
......|++|+||..+.+|++++. .+.+|+| +|||+|+|.++ +|||||||||++|+...++.+.+|+|+|||
T Consensus 236 ~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~~~~~~W~g~lsl 308 (445)
T TIGR01322 236 NIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYPTDRDGWAHCMTL 308 (445)
T ss_pred ccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCCCccCCccccccc
Confidence 112356999999987789987542 2579999 89999999986 799999999999987777778899999999
Q ss_pred cEEEEEecCCCceEEeechHHHHhhhccceeeeeEEEcCCceeeeccccceeEEEEEEEEEEeccccccccceeecCCcc
Q 009698 309 PRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGAI 388 (528)
Q Consensus 309 PRel~l~~~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~l~~~~~~~~~~~~~~~~~ 388 (528)
||+|+|+ +| +|+|+||+||++||..... .... .....+... ..+++|+++++.. .
T Consensus 309 pR~l~l~--~g-~L~~~Pv~el~~lr~~~~~---~~~~-~~~~~~~~~-~~~~~l~~~~~~~----------------~- 363 (445)
T TIGR01322 309 PRELTLK--DG-KLVQTPLRELKALRTEEHI---NVFG-DQEHTLPGL-NGEFELILDLEKD----------------S- 363 (445)
T ss_pred CEEEEEe--CC-eEEEEEhHHHHHHhcCccc---cccc-cccccccCC-CceEEEEEEecCC----------------C-
Confidence 9999996 45 8999999999999986532 0111 111111111 1234444332110 0
Q ss_pred ccccccceEEEEEEcCCCCceEEEEEEeccCCCCCeeEEEeecCCCCCCCCccccccceEEeeecCCeEEEEEEEeCCeE
Q 009698 389 DRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIV 468 (528)
Q Consensus 389 ~~~~~~~~gl~v~~~~~~~~~t~i~~~~~~~~~g~~~~~~~Dr~rs~~~~~~~~~~~g~~~~~~~~~~~~LrIfvD~S~i 468 (528)
..++||.+ .+ .++.+.|.|+.+++ .+++||++++...... .. ..+++...+.++||||||+|+|
T Consensus 364 ----~~~~~l~~-~~--~~~~~~i~~~~~~~------~l~~dr~~~~~~~~~~-~~--~~~~~~~~~~~~l~i~vD~s~v 427 (445)
T TIGR01322 364 ----AFELGLAL-TN--KGEETLLTIDADEG------KVTLDRRSSGNLEDYG-GT--RSCPLPNTKKVSLHIFIDKSSV 427 (445)
T ss_pred ----ccEEEEEE-eC--CCCeEEEEEECcCC------EEEEEccCCCCcCCcc-ce--EEEEcCCCCeEEEEEEEECCEE
Confidence 12478877 44 24678898877653 2789998875321110 11 1233333578999999999999
Q ss_pred EEEEeCCceEEEEeeecC
Q 009698 469 ESFGQGGRTVITSRIYPT 486 (528)
Q Consensus 469 EVF~N~G~~~~T~rvyp~ 486 (528)
|||||||+.|||+||||+
T Consensus 428 EvFvn~G~~~~t~riyp~ 445 (445)
T TIGR01322 428 EIFINDGEEVMTSRIFPD 445 (445)
T ss_pred EEEECCCEEEEEEeccCC
Confidence 999999999999999995
No 4
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=100.00 E-value=3.6e-84 Score=689.76 Aligned_cols=419 Identities=49% Similarity=0.903 Sum_probs=317.3
Q ss_pred eecc-cCccc--ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCCCCCCcEEEeeEEEccCC
Q 009698 11 HLCD-ENSMI--AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG 87 (528)
Q Consensus 11 H~~p-~gw~N--ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g 87 (528)
||+| .|||| ||++|++|+||||||++|+++.||+++||||+|+|||||+++|+||.|+.++|++|||||||++ .+|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~-~~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVI-DPG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEE-CCC
Confidence 9999 99999 9999999999999999999999999999999999999999999999999999999999999986 577
Q ss_pred eEEEEeccCCCC------CcceE-EEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEe
Q 009698 88 QIVMLYTGSTDK------SVQVQ-NLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 160 (528)
Q Consensus 88 ~~~~~YTg~~~~------~~~~q-~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~ 160 (528)
++++||||+... ..+.| +.|.|+|+ .+|+|+++|||+.++++....+||||+|+|+ ++|+|||++|+
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g~ 153 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDLG-----GTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIGA 153 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCCC-----CeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEEE
Confidence 799999998421 12333 44555553 8999998899998766656789999999775 44799999998
Q ss_pred e-cCCeeEEEEEEcCCCCCCeeccccccc-CCCC-CeeeEeeEEEeeecCccceeecCCCCCeEEEEeeecCCCcceEEE
Q 009698 161 K-IGKTGISLVYQTTDFKTYELLDEYLHA-VPGT-GMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 237 (528)
Q Consensus 161 ~-~~~~G~i~ly~S~DL~~W~~~~~l~~~-~~~~-g~wECPdlf~l~~~g~~~l~~~~~g~~~~~vl~~s~~~~~~~~Y~ 237 (528)
+ .+..|++++|+|+||++|++.+++... .... .||||||||+|+++++ ..+|||..|..+....+|.
T Consensus 154 ~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~~----------~~~~vLi~s~~g~~~~~y~ 223 (437)
T smart00640 154 SDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDGD----------TSKHVLKVSPQGGSGNYYF 223 (437)
T ss_pred EecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCCC----------ceeEEEEECcCCCCccEEE
Confidence 7 456799999999999999999998753 2333 4999999999986542 3589998887765567899
Q ss_pred EEEEcCCCCeeccCCCCcccccceeeccC-CCccceeeecCCCCcEEEEEEccCCCC-CCCCcCCCCcccCcccEEEEEe
Q 009698 238 IGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDT-ESDDLEKGWASVQTIPRTVLYD 315 (528)
Q Consensus 238 vG~~d~~~~~f~~~~~~~d~g~~~~lD~G-~fYA~~tf~~~~~gr~i~~gW~~~~~~-~~~~~~~gW~g~lslPRel~l~ 315 (528)
+|.|++. .+|+|+... .....+++|+| +|||||+|.+++.+||||||||++++. ....+..+|+|+|||||||+|+
T Consensus 224 ~G~~~g~-~~f~~~~~~-~~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l~ 301 (437)
T smart00640 224 VGYFDGS-DQFTPDDPE-DVGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTLD 301 (437)
T ss_pred EEEEcCc-eeEeECCcc-ccCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEEE
Confidence 9999873 479887543 11223589999 999999999974569999999999873 2222338999999999999996
Q ss_pred cCCCceEEeechHHHHhhhccceeeeeEEEcCCceeeec--cccceeEEEEEEEEEEeccccccccceeecCCccccccc
Q 009698 316 NKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLD--IGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAM 393 (528)
Q Consensus 316 ~~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~ 393 (528)
..+| +|+|+||+||++||... ......+..+....+. ...+.+++|+++|++. .. . .
T Consensus 302 ~~~g-~L~~~Pv~el~~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~--~~------------~-----~ 360 (437)
T smart00640 302 KTGG-KLLQWPVEELESLRNVK-ELSNLTLKPGSVNELLGLTASGDAYEIELSFEVD--SG------------G-----A 360 (437)
T ss_pred ecCC-EEEEeecHHHHhhhCcc-cccceeecCCceeeeecccCCccEEEEEEEEEeC--CC------------c-----c
Confidence 4455 89999999999999542 2333344322211111 1233456666554442 00 0 0
Q ss_pred cceEEEEEEcCCCCceEEEEEEeccCCCCCeeEEEeecCCCCCCCC-ccccccceEEeeecCCeEEEEEEEeCCeEEEEE
Q 009698 394 GPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPD-VFKQVHGSKVPVLQGEKLSMRILVDHSIVESFG 472 (528)
Q Consensus 394 ~~~gl~v~~~~~~~~~t~i~~~~~~~~~g~~~~~~~Dr~rs~~~~~-~~~~~~g~~~~~~~~~~~~LrIfvD~S~iEVF~ 472 (528)
.++||.+++++++++.+.|.|+.+++ .+++||++++.... .........+++...++++||||||+||||||+
T Consensus 361 ~~~~l~~~~~~~~~~~~~i~~~~~~~------~l~vdR~~~~~~~~~~~~~~~~~~~~~~~~~~~~lri~vD~ssvEvf~ 434 (437)
T smart00640 361 GPFGLLVLASEDLSEQTAVYFDVSKG------TLCLDRRSSGTSNDEVFKGVRGATVPVDPGETLSLRILVDHSSVEIFA 434 (437)
T ss_pred eeEEEEEEeCCCCCceEEEEEEcCCe------EEEEecCCCCCCcccccccceeeeeecCCCCeEEEEEEEeceEEEEEe
Confidence 24899998887777889999986643 38899966542111 000111111233335689999999999999999
Q ss_pred eCC
Q 009698 473 QGG 475 (528)
Q Consensus 473 N~G 475 (528)
|||
T Consensus 435 ndG 437 (437)
T smart00640 435 NGG 437 (437)
T ss_pred CCC
Confidence 987
No 5
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=100.00 E-value=1.2e-73 Score=583.45 Aligned_cols=296 Identities=40% Similarity=0.795 Sum_probs=243.2
Q ss_pred eecc-cCccc--ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCCCCCCcEEEeeEEEccCC
Q 009698 11 HLCD-ENSMI--AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG 87 (528)
Q Consensus 11 H~~p-~gw~N--ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g 87 (528)
||+| .|||| ||++|++|+||||||++|+++.||+++||||+|+|||||+++|+||.|+..+|++|||||||+++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 9999 99999 99999999999999999999999999999999999999999999999999999999999999874 66
Q ss_pred eEEEEeccCCCCCcceEEEEEEcCCCCCccceEEEcC-CCceecC-CCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCe
Q 009698 88 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP-GNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 165 (528)
Q Consensus 88 ~~~~~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~-~~Pvi~~-~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~ 165 (528)
++++||||+.+...+.|++|+|.|.+ .+|+|++ +||||.. |++ ...+||||+|+|+ ++++|+|++|++...+
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~-~~~~~~m~~g~~~~~~ 153 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWR-EDGRWYMLLGAGRDGR 153 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEE-CTTEEEEEEEEEETTE
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEe-cCCEEEEEEeccccCc
Confidence 89999999987658999999996654 8999998 4999985 444 6789999999887 5699999999987788
Q ss_pred eEEEEEEcCCCCCCeecccccccCC-CCCeeeEeeEEEeeecCccceeecCCCCCeEEEEeeec----CCCcceEEEEEE
Q 009698 166 GISLVYQTTDFKTYELLDEYLHAVP-GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL----DDTKVDHYAIGT 240 (528)
Q Consensus 166 G~i~ly~S~DL~~W~~~~~l~~~~~-~~g~wECPdlf~l~~~g~~~l~~~~~g~~~~~vl~~s~----~~~~~~~Y~vG~ 240 (528)
|++++|+|+||++|++.+.+..... ..+||||||||+|++++.. +...+|||..+. .....+.|+||+
T Consensus 154 g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~~-------~~~~~~vl~~s~~g~~~~~~~~~Y~vG~ 226 (308)
T PF00251_consen 154 GCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGDG-------TGKWVWVLIFSPQGIEDNGHGTYYMVGD 226 (308)
T ss_dssp EEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTSS-------SEEEEEEEEEEEESTTTTTTEEEEEEEE
T ss_pred ceEEEEEcCCcccCceeCcccccccccccccccceEEEECCcccc-------cceEEEEEEecccccccccccceEEeEE
Confidence 9999999999999999999886433 3459999999999966220 123456777776 345577899999
Q ss_pred EcCCCCeeccCCCCcccccceeeccC-CCccceeeecCCCCcEEEEEEccCCCCCC-CCcCCCCcccCcccEEEEEecCC
Q 009698 241 YNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTES-DDLEKGWASVQTIPRTVLYDNKT 318 (528)
Q Consensus 241 ~d~~~~~f~~~~~~~d~g~~~~lD~G-~fYA~~tf~~~~~gr~i~~gW~~~~~~~~-~~~~~gW~g~lslPRel~l~~~~ 318 (528)
||..+++|+++... .+++|+| +|||+|+|.+++++||||||||++++... ...+.+|+|+|||||||+|++ +
T Consensus 227 ~d~~~~~f~~~~~~-----~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~-~ 300 (308)
T PF00251_consen 227 FDFDGGTFTPDDSS-----FQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKD-E 300 (308)
T ss_dssp EETTTTEEEESSTT-----SEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEET-T
T ss_pred ecCCCCeeeeeccc-----cceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEE-C
Confidence 98777899876221 4689999 79999999997545999999999988642 233689999999999999974 3
Q ss_pred CceEEeec
Q 009698 319 GSNVVQWP 326 (528)
Q Consensus 319 g~~L~q~P 326 (528)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 45899998
No 6
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=100.00 E-value=5.6e-65 Score=517.48 Aligned_cols=290 Identities=40% Similarity=0.760 Sum_probs=238.7
Q ss_pred Cccc--ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEe
Q 009698 16 NSMI--AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 93 (528)
Q Consensus 16 gw~N--ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~Y 93 (528)
|||| ||++|++|+||||||++|.++.|++++||||+|+|||||+++|+||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 8999 99999999999999999999999999999999999999999999999988899999999999875449999999
Q ss_pred ccCCC---CCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeec-CCeeEEE
Q 009698 94 TGSTD---KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 169 (528)
Q Consensus 94 Tg~~~---~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~-~~~G~i~ 169 (528)
||+.. ...+.|++|+|+|.+ .+|+|...+|++.++ .....+||||+|++ .+|+|+|+++++. +..|++.
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~ddg----~~w~k~~~~~~~~~~-~~~~~~~RDP~V~~--~~g~~~m~~g~~~~~~~~~i~ 153 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDDG----RTFTKYEGNPVIPPP-DGYTTHFRDPKVFW--HDGKWYMVLGAGTEDGTGRIL 153 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCCC----CEEEECCCCceEcCC-CCCCCcccCCeEEe--ECCEEEEEEEEEecCCCcEEE
Confidence 99874 456899999998532 899999889988632 33457899999954 3599999999874 4568899
Q ss_pred EEEcCCCCCCeeccccc-ccCCCCCeeeEeeEEEeeecCccceeecCCCCCeEEEEeeecCCCcceEEEEEEEcCCCCee
Q 009698 170 VYQTTDFKTYELLDEYL-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKW 248 (528)
Q Consensus 170 ly~S~DL~~W~~~~~l~-~~~~~~g~wECPdlf~l~~~g~~~l~~~~~g~~~~~vl~~s~~~~~~~~Y~vG~~d~~~~~f 248 (528)
+|+|+||++|++.+.+. .......|||||+||+|+++++++|++|.++....- ......|++|+|++. .|
T Consensus 154 ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~~k~vL~~s~~~~~~~~-------~~~~~~y~~G~~~~~--~~ 224 (298)
T cd08996 154 LYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVEGKWVLIFSPQGLEPEG-------NGSGTGYLVGDFDGT--TF 224 (298)
T ss_pred EEECCCCCCCEEcceecccCCCccceEeCCcEEEECCCCeEEEEECCCCCCCCC-------CccceEEEEEEEECC--CC
Confidence 99999999999998874 222223499999999997534455555554321100 123468999999976 56
Q ss_pred ccCCCCcccccceeeccC-CCccceeeecCCCCcEEEEEEccCCCCCCCCcCCCCcccCcccEEEEEecCCCceEEeech
Q 009698 249 TPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPV 327 (528)
Q Consensus 249 ~~~~~~~d~g~~~~lD~G-~fYA~~tf~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPRel~l~~~~g~~L~q~Pv 327 (528)
+++.. ..+++|+| +|||+|+|.++ ++|+||||||++++...+..+.+|+|+|||||||+|++ ++ +|.|+|+
T Consensus 225 ~~~~~-----~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~-~~-~l~~~P~ 296 (298)
T cd08996 225 TFDHT-----EFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKD-GG-RLYQRPV 296 (298)
T ss_pred eEecC-----CceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEcc-CC-EEEEEeC
Confidence 55311 14689999 99999999987 79999999999999877888999999999999999974 33 8999999
Q ss_pred HH
Q 009698 328 EE 329 (528)
Q Consensus 328 ~e 329 (528)
+|
T Consensus 297 ~e 298 (298)
T cd08996 297 RE 298 (298)
T ss_pred CC
Confidence 76
No 7
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=100.00 E-value=1.1e-53 Score=430.74 Aligned_cols=265 Identities=22% Similarity=0.400 Sum_probs=213.3
Q ss_pred ceeEEECCEEEEEeeeCCCCCCC--CCceEEEEEeCCcccceecccccCC-CCCCCCCcEEEeeEEEccCCeEEEEeccC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVW--GNITWGHAVSADLIHWLYLPIAMVP-DQWYDINGVWTGSATILPDGQIVMLYTGS 96 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~--g~~~wgha~S~Dlv~W~~~p~al~p-~~~~d~~gv~sGs~v~~~~g~~~~~YTg~ 96 (528)
..++|++|+||||||++|.+..| ++++||||+|+||+||+++|+||.| +..++..|||+|||++ .+|+++|||||+
T Consensus 3 ~~~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~YTg~ 81 (280)
T cd08995 3 PMPFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFYTGH 81 (280)
T ss_pred ccceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEEEEE
Confidence 36899999999999999999888 8999999999999999999999988 4567889999999986 689999999997
Q ss_pred CCC--CcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeec-----CCeeEEE
Q 009698 97 TDK--SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTGISL 169 (528)
Q Consensus 97 ~~~--~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~-----~~~G~i~ 169 (528)
... ..+.|++|+|+|+ .+|+|.+.+||+.+++++...+||||+|++.+.+|+|+|+++++. +..|++.
T Consensus 82 ~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g~i~ 156 (280)
T cd08995 82 NLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIA 156 (280)
T ss_pred CCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCeEEE
Confidence 642 4578999999985 799999888998755555567899999965434799999999874 4578999
Q ss_pred EEEcCCCCCCeecccccccCCCCCeeeEeeEEEeeecCccceeecCCCCCeEEEEeeecCCCcceEEEEEEEcCCCCeec
Q 009698 170 VYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWT 249 (528)
Q Consensus 170 ly~S~DL~~W~~~~~l~~~~~~~g~wECPdlf~l~~~g~~~l~~~~~g~~~~~vl~~s~~~~~~~~Y~vG~~d~~~~~f~ 249 (528)
+|+|+||++|++.+++... ....|||||++|+++ ++++|++|.++ ......|++|+.. .+.|.
T Consensus 157 ~~~S~Dl~~W~~~~~~~~~-~~~~~~E~P~l~~~~--g~~~L~~s~~~------------~~~~~~Y~~~~~~--~g~~~ 219 (280)
T cd08995 157 LFTSKDLKNWEYEEPFYAP-GLYFMPECPDLFKMG--DWWYLVYSEFS------------ENRKTHYRVSKSP--FGPWR 219 (280)
T ss_pred EEEeCCcCcceecCceecC-CCcceeecceEEEEC--CEEEEEEEecc------------CCCcEEEEEeCCC--CCCeE
Confidence 9999999999999877543 233499999999997 44444444432 1234568898622 23554
Q ss_pred cCCCCcccccceeeccC-CCccceeeecCCCCcEEEEEEccCCCCCCCCcCCCCcccCcccEEEEEecCCC
Q 009698 250 PDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTG 319 (528)
Q Consensus 250 ~~~~~~d~g~~~~lD~G-~fYA~~tf~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPRel~l~~~~g 319 (528)
.... ..+| | +|||||+|.++ |||||||||++++..+++.+.+|+|||| ||||.+.+ +|
T Consensus 220 ~~~~-------~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~-~g 278 (280)
T cd08995 220 APDD-------DTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNE-DG 278 (280)
T ss_pred cCCc-------CccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECC-CC
Confidence 3221 2478 7 99999999985 9999999999999888888899999999 68888863 55
No 8
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=100.00 E-value=3.6e-37 Score=308.64 Aligned_cols=236 Identities=26% Similarity=0.332 Sum_probs=182.4
Q ss_pred CEEEEEeeeCCCCCCCC-CceEEEEEeCCcccceeccccc--CCCCCCCCCcEEEeeEEEccCCeEEEEeccCCC--CCc
Q 009698 27 GWYHLFYQYNPDSAVWG-NITWGHAVSADLIHWLYLPIAM--VPDQWYDINGVWTGSATILPDGQIVMLYTGSTD--KSV 101 (528)
Q Consensus 27 G~yHlfyq~~p~~~~~g-~~~wgha~S~Dlv~W~~~p~al--~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~~--~~~ 101 (528)
|+||||||++|.+..++ ..+|+||+|+||+||++.+.+| .|...++..+||+|+++...+|+++||||+... ...
T Consensus 14 g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt~~~~~~~~~ 93 (276)
T cd08979 14 GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYTGYDRPKGAV 93 (276)
T ss_pred eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEecccCCCCCc
Confidence 99999999999987644 4568999999999999999887 566788999999999987544999999999863 456
Q ss_pred ceEEEEEEcCCCCCccceEEEcCCCcee-----cCCCCCCCCCccCCeeEEEcCCCcEEEEEEeec-CCeeEEEEEEcCC
Q 009698 102 QVQNLAYPADPSDPLLLDWVKYPGNPVL-----VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTTD 175 (528)
Q Consensus 102 ~~q~lA~s~D~~d~~l~~w~k~~~~Pvi-----~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~-~~~G~i~ly~S~D 175 (528)
+.+++|+|+|+ .+|+|.+.+|++ ..+......++|||+|++.+.+|+|+|++++.. +..+++.+|+|+|
T Consensus 94 ~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~~i~~a~S~D 168 (276)
T cd08979 94 QRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPD 168 (276)
T ss_pred ceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCcEEEEEECCC
Confidence 88999999985 899998777754 222233456899999965433399999999873 4457899999999
Q ss_pred CCCCeeccccc--ccCCCCCeeeEeeEEEeeecCccceeecCCCCCeEEEEeeecCC-CcceEEEEEEEcCCCCeeccCC
Q 009698 176 FKTYELLDEYL--HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-TKVDHYAIGTYNPANDKWTPDN 252 (528)
Q Consensus 176 L~~W~~~~~l~--~~~~~~g~wECPdlf~l~~~g~~~l~~~~~g~~~~~vl~~s~~~-~~~~~Y~vG~~d~~~~~f~~~~ 252 (528)
|++|++.+.+. .......++|||++|+++ + +|+|..+... .....|.+|.++.. .|+|..
T Consensus 169 ~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~~~~--~~~~~~ 231 (276)
T cd08979 169 LIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTALFG--PGRPLT 231 (276)
T ss_pred CCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEecccC--Cccccc
Confidence 99999988762 222233589999999996 3 4555555432 33467999987754 455432
Q ss_pred CCcccccceeeccC-CCccceeeecCCCCcEEEEEEccCC
Q 009698 253 PEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINET 291 (528)
Q Consensus 253 ~~~d~g~~~~lD~G-~fYA~~tf~~~~~gr~i~~gW~~~~ 291 (528)
...+|.| +|||+|++.+..++|++++|||+++
T Consensus 232 -------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 232 -------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred -------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 1358888 8999999987546999999999986
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=100.00 E-value=3.7e-33 Score=280.23 Aligned_cols=270 Identities=26% Similarity=0.396 Sum_probs=197.2
Q ss_pred eEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccC----CCCCCCCCcEEEeeEEEccCCeEEEEeccCC
Q 009698 22 PLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSATILPDGQIVMLYTGST 97 (528)
Q Consensus 22 ~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~----p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~ 97 (528)
+++++|+||||||++|.+ +.++|+|++|+||+||++++.+|. |...++..++|+|+++...+|+++||||+..
T Consensus 5 i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~yt~~~ 81 (286)
T cd08772 5 LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLYYTDVS 81 (286)
T ss_pred EEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEEEEeec
Confidence 788999999999999875 678999999999999999998874 6667788999999998754499999999975
Q ss_pred C-CCcceEEEEEEcCCCCCccceEEEcCCCceecC-CCCCCCCCccCCeeEEEcCCCcEEEEEEeec-CCeeEEEEEEcC
Q 009698 98 D-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTT 174 (528)
Q Consensus 98 ~-~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~-~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~-~~~G~i~ly~S~ 174 (528)
. ...+.+++|+|+|.. ..|++...+||+.. +.......+|||+|+ .+++|+|||++++.. ...+.|.+++|+
T Consensus 82 ~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~-~d~dG~~y~~~~~~~~~~~~~i~~~~s~ 156 (286)
T cd08772 82 FTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVF-EDDDGKWYLVFGSGDHHNFGGIFLYESD 156 (286)
T ss_pred CCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEE-EcCCCCEEEEEccccCCCCCeEEEEEcC
Confidence 3 245789999998863 46776655666543 222334678999995 445699999998763 235678999999
Q ss_pred CCCCCeecccc--cccCCCCCeeeEeeEEEeeecCccceeecCCCCCeEEEEeeecCCCcceEEEEEEEcCCCCeeccCC
Q 009698 175 DFKTYELLDEY--LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDN 252 (528)
Q Consensus 175 DL~~W~~~~~l--~~~~~~~g~wECPdlf~l~~~g~~~l~~~~~g~~~~~vl~~s~~~~~~~~Y~vG~~d~~~~~f~~~~ 252 (528)
|+.+|+..+.. .......+++|||++|+++ |+.+|++|..+... ........|.+++.+ .+.|++..
T Consensus 157 d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g~~yL~~s~~~~~~-------~~~~y~~~~~~~~~~--~g~~~~~~ 225 (286)
T cd08772 157 DDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--GKYYLFYSINGTGR-------VDSTYSIGYARSESD--TGPYVPKS 225 (286)
T ss_pred CCCCcccccceeeEeeccCCCceeccEEEEEC--CEEEEEEEcCCCcC-------CCCCcceEEEEccCC--CCCcccCC
Confidence 99999987764 2222234589999999996 55556665543110 011234567777643 34676543
Q ss_pred CCc-ccccceeeccC-CCccceeeecCCCCcEEEEEEccCCCCCCCCcCCCCcccCcccEEE
Q 009698 253 PEE-DVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV 312 (528)
Q Consensus 253 ~~~-d~g~~~~lD~G-~fYA~~tf~~~~~gr~i~~gW~~~~~~~~~~~~~gW~g~lslPRel 312 (528)
... -.-.....|.+ ++||++.|.++ ++|++|++|+.+++.... ...+|.++|+|||+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~ 285 (286)
T cd08772 226 DTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLL 285 (286)
T ss_pred CCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCcccccccccc
Confidence 210 00011235666 79999999987 799999999998765333 567999999999986
No 10
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.93 E-value=1.5e-24 Score=221.59 Aligned_cols=186 Identities=22% Similarity=0.219 Sum_probs=130.9
Q ss_pred ECCEEEEEeeeCCCC----CCCCCceEEEEEeCCcccceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEeccCCC--
Q 009698 25 YKGWYHLFYQYNPDS----AVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTD-- 98 (528)
Q Consensus 25 ~~G~yHlfyq~~p~~----~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~~-- 98 (528)
++|..-+|+...|.. +.|+.+||||++|+||+||++.+ +|.|+..+|.++||||||++..+|+++|||||+.+
T Consensus 17 ~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~-~l~p~~~~d~~g~wSGsa~~~~dg~~~lfYTg~~~~~ 95 (349)
T cd08997 17 YNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGG-KVFPDGLSPGSREWSGSATLDDDGTVQLFYTAVGRKG 95 (349)
T ss_pred ECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCC-ccCCCCcccCCCeEcceEEEeCCCeEEEEEeccccCC
Confidence 466533899877654 45889999999999999999955 57788889999999999987667999999999863
Q ss_pred --CCcceEEEEEEcCCCCCccceEEEcC--CCceecCC--------------CCCCCCCccCCeeEEEcCCCcEEEEEEe
Q 009698 99 --KSVQVQNLAYPADPSDPLLLDWVKYP--GNPVLVPP--------------RHIGPKDFRDPTTAWAGPDGKWRLTIGS 160 (528)
Q Consensus 99 --~~~~~q~lA~s~D~~d~~l~~w~k~~--~~Pvi~~~--------------~~~~~~~~RDP~V~~~~~~g~~~m~~g~ 160 (528)
.....|++|.+.+.. +..|.+.. ..+++.+. +.....+||||+||..+++|+|||++++
T Consensus 96 ~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G~~ymvfea 172 (349)
T cd08997 96 EPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETGKTYLLFEG 172 (349)
T ss_pred CCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCCcEEEEEEe
Confidence 234677777765431 12232211 12333321 1123568999999433236999999998
Q ss_pred ec-CC---------------------------eeEEEEE--EcCCCCCCeecccccccCCCCCeeeEeeEEEeeecCccc
Q 009698 161 KI-GK---------------------------TGISLVY--QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVG 210 (528)
Q Consensus 161 ~~-~~---------------------------~G~i~ly--~S~DL~~W~~~~~l~~~~~~~g~wECPdlf~l~~~g~~~ 210 (528)
+. .. .|+|.++ +|+||.+|++.++|..+......||||++|+++ |+++
T Consensus 173 nt~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~~~~--gk~y 250 (349)
T cd08997 173 NTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVVFHN--GKYY 250 (349)
T ss_pred ccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEEEEC--CEEE
Confidence 63 22 3555555 678999999999997643223479999999997 6566
Q ss_pred eeecCC
Q 009698 211 LDTSAT 216 (528)
Q Consensus 211 l~~~~~ 216 (528)
|++|+.
T Consensus 251 L~~s~~ 256 (349)
T cd08997 251 LFTISH 256 (349)
T ss_pred EEEeCC
Confidence 665543
No 11
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.86 E-value=1.1e-20 Score=191.56 Aligned_cols=184 Identities=21% Similarity=0.265 Sum_probs=137.6
Q ss_pred ceeEEECCEEEEEeeeCCCC----CCCCCceEEEEEeCCc-ccceec-ccccCCCC-CCCCCcEEEeeEEEccCCeEEEE
Q 009698 20 AGPLFYKGWYHLFYQYNPDS----AVWGNITWGHAVSADL-IHWLYL-PIAMVPDQ-WYDINGVWTGSATILPDGQIVML 92 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~----~~~g~~~wgha~S~Dl-v~W~~~-p~al~p~~-~~d~~gv~sGs~v~~~~g~~~~~ 92 (528)
..+++++|+|||||...... ...+..+.|+|+|+|+ .+|+++ .++|.|.. .|+..++..++++...+|+++|+
T Consensus 83 P~vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~~m~ 162 (291)
T cd08994 83 PTIKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSYLLV 162 (291)
T ss_pred CeEEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCEEEE
Confidence 46677899999999976431 1224578999999994 699984 56777754 37888899999986448999999
Q ss_pred eccCCCC---CcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeec----CCe
Q 009698 93 YTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI----GKT 165 (528)
Q Consensus 93 YTg~~~~---~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~----~~~ 165 (528)
|+|+... ..+.+++|+|+|.. .+|+|.+..||+ . + ....++|||+| |+ .+|+|||+++++. +..
T Consensus 163 y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~-~-~-~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~~~~ 233 (291)
T cd08994 163 YKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI-E-P-GDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVTGEK 233 (291)
T ss_pred EeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc-c-C-CCCCceeCceE-EE-eCCEEEEEEeecccCcCCCC
Confidence 9998642 35678999998863 589998666665 2 1 23468899999 66 5699999999874 346
Q ss_pred eEEEEEEcCCCCCCeecccccc----c-CC----CCCeeeEeeEE-EeeecCccceeec
Q 009698 166 GISLVYQTTDFKTYELLDEYLH----A-VP----GTGMWECVDFY-PVAINGSVGLDTS 214 (528)
Q Consensus 166 G~i~ly~S~DL~~W~~~~~l~~----~-~~----~~g~wECPdlf-~l~~~g~~~l~~~ 214 (528)
+++.+|+|+|+++|++.+.+.. . .+ ...|||||++| ..+ |+..+++|
T Consensus 234 ~~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~--g~~~~l~~ 290 (291)
T cd08994 234 GGGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED--GKPTYLFF 290 (291)
T ss_pred ceEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC--CCEEEEec
Confidence 7899999999999999987731 1 11 23499999999 775 55555544
No 12
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.83 E-value=2.1e-19 Score=180.17 Aligned_cols=150 Identities=19% Similarity=0.212 Sum_probs=118.2
Q ss_pred cceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecc-cccCC--CCCCCCCcEEEeeEEEccCCeEEEEecc
Q 009698 19 IAGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVP--DQWYDINGVWTGSATILPDGQIVMLYTG 95 (528)
Q Consensus 19 Nng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p-~al~p--~~~~d~~gv~sGs~v~~~~g~~~~~YTg 95 (528)
|.++++++|+||||||.++.. +.++||||+|+|++||++.+ +.|.| +..++..+|++++++. .+|+++|+||+
T Consensus 2 nP~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Yta 77 (268)
T cd08993 2 NPAVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITYAA 77 (268)
T ss_pred cCeEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEEEc
Confidence 468899999999999987643 56899999999999999876 44666 5678889999999974 79999999999
Q ss_pred CCC-CCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEE-cCCCcEEEEEEeec---CCeeEEEE
Q 009698 96 STD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWA-GPDGKWRLTIGSKI---GKTGISLV 170 (528)
Q Consensus 96 ~~~-~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~-~~~g~~~m~~g~~~---~~~G~i~l 170 (528)
... ...+++++|.|+|+ .+|+|.. .+ +. + ..||+++ |. +.+|+|+|++.... +..+.|.+
T Consensus 78 ~~~~~~~~~i~lA~S~D~-----~~W~~~~-~~-~~-~------~~~d~~~-~p~~~~g~y~m~~r~~~~~~~~~~~I~l 142 (268)
T cd08993 78 RPNAPNGTRIGLATTKDF-----ITFERLG-TS-LV-P------NNRDGIL-FPEKINGKYVMLHRPFEYGGTSPPDMWL 142 (268)
T ss_pred cCCCCCCcEEEEEEeCCc-----ceEEEec-cc-CC-C------CCCCEEE-eeEEECCEEEEEEccccCCCCCCCcEEE
Confidence 762 34578999999985 8999973 21 21 1 2378888 53 35899999996432 34578999
Q ss_pred EEcCCCCCCeecccccc
Q 009698 171 YQTTDFKTYELLDEYLH 187 (528)
Q Consensus 171 y~S~DL~~W~~~~~l~~ 187 (528)
++|+||.+|+..+.++.
T Consensus 143 A~S~Dl~~W~~~~~~~~ 159 (268)
T cd08993 143 SFSPDLVHWGNHRFVLS 159 (268)
T ss_pred EECCCcCccCCCeEEec
Confidence 99999999998777654
No 13
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.82 E-value=4.7e-19 Score=180.01 Aligned_cols=159 Identities=21% Similarity=0.284 Sum_probs=122.1
Q ss_pred ceeEEECCEEEEEeeeCCCCC--CCCCceEEEEEeCCcccceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEeccCC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSA--VWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 97 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~--~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~ 97 (528)
.-+++++|+||||||++|..+ .++.++|+||+|+||++|++.++++.+ ..++++++++.+.+|+++|||++..
T Consensus 82 P~v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~~-----~~~~iD~~vf~~~dg~~yl~y~~~~ 156 (294)
T cd08984 82 PEVVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDLD-----SDRVIDACVFKLPDGRWRMWYKDER 156 (294)
T ss_pred ceEEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCccccC-----CCCcEEeEEEEeCCCEEEEEEECCC
Confidence 577889999999999998653 346789999999999999998876322 3578999998766699999999864
Q ss_pred CCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEEEEcCCCC
Q 009698 98 DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFK 177 (528)
Q Consensus 98 ~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~ly~S~DL~ 177 (528)
. ...+++|.|.|+ .+|++. .+++.. ...++|+| |+ .+|+|||+++. ..| +.+|+|+|+.
T Consensus 157 ~--~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v-~k-~~g~yym~~~~---~~g-~~~~~S~D~~ 215 (294)
T cd08984 157 R--GSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV-FR-WKGYYWMIIDE---WKG-LGVYRSKDAE 215 (294)
T ss_pred C--CeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-eE-ECCEEEEEEcC---Cce-EEEEECCChh
Confidence 3 245689999885 799985 456542 12389999 55 68999999753 234 6799999999
Q ss_pred CCeecccccccCC---C-CCeeeEeeEEEee
Q 009698 178 TYELLDEYLHAVP---G-TGMWECVDFYPVA 204 (528)
Q Consensus 178 ~W~~~~~l~~~~~---~-~g~wECPdlf~l~ 204 (528)
+|++.+.++.... . ..+++||++++.+
T Consensus 216 ~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 216 NWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred hcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 9999987764321 1 2268999999876
No 14
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.77 E-value=2.4e-17 Score=165.81 Aligned_cols=180 Identities=14% Similarity=0.136 Sum_probs=131.9
Q ss_pred cCccc-ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCC-CCCCCCcEEEeeEEEccCCeEEEE
Q 009698 15 ENSMI-AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD-QWYDINGVWTGSATILPDGQIVML 92 (528)
Q Consensus 15 ~gw~N-ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~-~~~d~~gv~sGs~v~~~~g~~~~~ 92 (528)
.||++ ..+++++|+||||++..+.+. ....|.+++|+||+||+.++.+|.+. ..|+..++|.++++. .+|+++|+
T Consensus 5 ~g~~~DP~i~~~~g~yY~~~t~~~~~~--~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy~y 81 (275)
T cd09004 5 PGWYADPEIRIFGGTYYIYPTSDGAGG--EQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYYFY 81 (275)
T ss_pred CCCCCCCCeEEECCEEEEEEeccCCCC--CeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEEEE
Confidence 56777 778899999999998765432 24679999999999999999988764 456778999999975 68999999
Q ss_pred eccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEEEE
Q 009698 93 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ 172 (528)
Q Consensus 93 YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~ly~ 172 (528)
||+. +.+++|+|++.. ..|++...+|++.+.. .....+||.|| .+++|+|||++++. .+..+.--
T Consensus 82 ys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~i~~l 146 (275)
T cd09004 82 FSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDVF-IDDDGQAYLYWGGW---GHCNVAKL 146 (275)
T ss_pred EEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCeE-ECCCCCEEEEEcCc---CCEEEEEE
Confidence 9986 457899998753 5788755678876432 12568999995 45789999999863 12222235
Q ss_pred cCCCCCCeecccccccCCCCCeeeEeeEEEeeecCccceeecC
Q 009698 173 TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSA 215 (528)
Q Consensus 173 S~DL~~W~~~~~l~~~~~~~g~wECPdlf~l~~~g~~~l~~~~ 215 (528)
|+|+.+|+....... .....+.|||.+|+.+ |..+|++|.
T Consensus 147 ~~d~~~~~~~~~~~~-~~~~~~~EgP~i~k~~--G~yyl~ys~ 186 (275)
T cd09004 147 NEDMISFDGERDGSE-ITPKNYFEGPFMFKRN--GIYYLMWSE 186 (275)
T ss_pred CCCcccccCcceeee-ccCCCceecceEEEEC--CEEEEEEEC
Confidence 788998876443321 1122479999999986 555555554
No 15
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.76 E-value=4.2e-17 Score=165.34 Aligned_cols=195 Identities=19% Similarity=0.193 Sum_probs=140.3
Q ss_pred eecc-cCccc-ceeEEE-CCEEEEEeeeCCCCCC---C-CCceEEEEEeCCcc-cceecccccCCC--CCCCCCcEEEee
Q 009698 11 HLCD-ENSMI-AGPLFY-KGWYHLFYQYNPDSAV---W-GNITWGHAVSADLI-HWLYLPIAMVPD--QWYDINGVWTGS 80 (528)
Q Consensus 11 H~~p-~gw~N-ng~~~~-~G~yHlfyq~~p~~~~---~-g~~~wgha~S~Dlv-~W~~~p~al~p~--~~~d~~gv~sGs 80 (528)
+|.. ..++= ..++.. +|+||||||..|.+.. | ....||||+|+|+. +|+..+++|.|+ ..||..++++++
T Consensus 5 ~~~~~~~~~w~~~vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~P~ 84 (291)
T cd08994 5 GLEDEDYSVWGGSIIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHNPT 84 (291)
T ss_pred eeeeCCeEEEecceEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccCCe
Confidence 3444 44444 566665 4899999999887643 2 23569999999987 899999999887 468999999999
Q ss_pred EEEccCCeEEEEeccCCC-------CCcceEEEEEEcCCCCCccceEEEcCCCceecC-CCCCCCCCccCCeeEEEcCCC
Q 009698 81 ATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGPKDFRDPTTAWAGPDG 152 (528)
Q Consensus 81 ~v~~~~g~~~~~YTg~~~-------~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~-~~~~~~~~~RDP~V~~~~~~g 152 (528)
++. .+|+++||||+... ...+.+++|+|++. +.+|++. .+||+.+ +.+++...+.||+| ++..+|
T Consensus 85 vi~-~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~----~g~w~~~-~~pvl~~~~~~~~~~~~~~p~v-~~~~~g 157 (291)
T cd08994 85 IKR-FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSL----DGPWKRS-DQPILEPRPGGWDNLITSNPAV-TRRPDG 157 (291)
T ss_pred EEE-ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCC----CCCcEEC-CCceecCCCCccccccccCCCe-EEeCCC
Confidence 975 68999999999753 22467889999874 2689997 6899975 33455667899999 554489
Q ss_pred cEEEEEEeecC----CeeEEEEEEcCCC-CCCeeccccc-ccCCCCCeeeEeeEEEeeecCccceeec
Q 009698 153 KWRLTIGSKIG----KTGISLVYQTTDF-KTYELLDEYL-HAVPGTGMWECVDFYPVAINGSVGLDTS 214 (528)
Q Consensus 153 ~~~m~~g~~~~----~~G~i~ly~S~DL-~~W~~~~~l~-~~~~~~g~wECPdlf~l~~~g~~~l~~~ 214 (528)
+|+|++.+... ...++.++.|+|+ ..|+..+... .........|=|.+|+-+ |+..++++
T Consensus 158 ~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V~~~~--g~yym~~~ 223 (291)
T cd08994 158 SYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFVWYDK--GQFHMIVK 223 (291)
T ss_pred CEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceEEEeC--CEEEEEEe
Confidence 99999987531 2356778899887 6899875322 111122357889888875 44444333
No 16
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.70 E-value=1.8e-15 Score=152.97 Aligned_cols=179 Identities=20% Similarity=0.165 Sum_probs=123.9
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCC-CCCCcEEEeeEEEccCCeEEEEeccCCC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-YDINGVWTGSATILPDGQIVMLYTGSTD 98 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~-~d~~gv~sGs~v~~~~g~~~~~YTg~~~ 98 (528)
..+++++|+|+||+...+. .+|++++|+||+||+.++.+|.+... +...++|.+.++. .+|+++|+|++...
T Consensus 11 P~i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~~y~~~~~ 83 (287)
T cd08999 11 PSVIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVLYYSARDK 83 (287)
T ss_pred CeEEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEEEEEeecC
Confidence 6778899999999976432 67999999999999999988877665 4556788888864 68999999999864
Q ss_pred C-CcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCee---EEEEE-Ec
Q 009698 99 K-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG---ISLVY-QT 173 (528)
Q Consensus 99 ~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G---~i~ly-~S 173 (528)
. ..+.+++|+|+|.. ..|++....++..+.. ....+||.|+ .+++|+|||++++.....+ .+.+. .|
T Consensus 84 ~~~~~~i~~a~s~~p~----g~~~~~~~~~~~~~~~---~~~~~Dp~v~-~d~dG~~Yl~~~~~~~~~~~~~~i~~~~ls 155 (287)
T cd08999 84 GSGGQCIGVATADSPL----GPFTDHGKPPLCCPEG---EGGAIDPSFF-TDTDGKRYLVWKSDGNSIGKPTPIYLQELS 155 (287)
T ss_pred CCCCEEEEEEECCCCC----CCCccCCcceEecCCC---CCCccCCCeE-ECCCCCEEEEEeccCCCCCCCceEEEEEeC
Confidence 2 34567889887742 5798864334332221 2467999994 5568999999986532111 13333 37
Q ss_pred CCCCCCeeccc-ccccC-C-CCCeeeEeeEEEeeecCccceeecC
Q 009698 174 TDFKTYELLDE-YLHAV-P-GTGMWECVDFYPVAINGSVGLDTSA 215 (528)
Q Consensus 174 ~DL~~W~~~~~-l~~~~-~-~~g~wECPdlf~l~~~g~~~l~~~~ 215 (528)
+|+.+|..... +.... . ...++|||.+|+.+ |..+|++|.
T Consensus 156 ~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g~yyl~~S~ 198 (287)
T cd08999 156 ADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--GYYYLFYSA 198 (287)
T ss_pred CCCccccCCcEeeecccccccCCceEeeEEEEEC--CEEEEEEEc
Confidence 89988865432 22211 1 22479999999985 554555543
No 17
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.65 E-value=4.9e-15 Score=149.03 Aligned_cols=182 Identities=13% Similarity=0.154 Sum_probs=129.6
Q ss_pred eeEEECCEEEEEeeeCCCCCC---CCCceEEEEEeCCcccceecccccCCCC--CCCCCcEEEeeEEEccCCeEEEEecc
Q 009698 21 GPLFYKGWYHLFYQYNPDSAV---WGNITWGHAVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSATILPDGQIVMLYTG 95 (528)
Q Consensus 21 g~~~~~G~yHlfyq~~p~~~~---~g~~~wgha~S~Dlv~W~~~p~al~p~~--~~d~~gv~sGs~v~~~~g~~~~~YTg 95 (528)
.++.++|+||||.......+. .....|..++|+||+||+..+.+|.+.. .|+..++|.++++. .+|+++|||++
T Consensus 4 ~~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~yy~~ 82 (274)
T cd08990 4 AAHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYLYFPA 82 (274)
T ss_pred CcEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEEEEEe
Confidence 467789999999987654432 2345699999999999999998886543 37788999999975 79999999998
Q ss_pred CCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEEEEcCC
Q 009698 96 STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD 175 (528)
Q Consensus 96 ~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~ly~S~D 175 (528)
......+.+++|+|+|.. ..|+.....|++...+ ......||.|+ .+++|++||++++. .+..+.-.|+|
T Consensus 83 ~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~~~~l~~d 152 (274)
T cd08990 83 RDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAVF-IDDDGQAYLYWGGG---LGLRVAKLKPD 152 (274)
T ss_pred ecCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcEE-ECCCCCEEEEECCc---CCEEEEEeCcc
Confidence 754334678899998752 5798875556554221 23467899995 45789999999864 23333446889
Q ss_pred CCCCeeccccccc-----CCCCCeeeEeeEEEeeecCccceeecC
Q 009698 176 FKTYELLDEYLHA-----VPGTGMWECVDFYPVAINGSVGLDTSA 215 (528)
Q Consensus 176 L~~W~~~~~l~~~-----~~~~g~wECPdlf~l~~~g~~~l~~~~ 215 (528)
+.+|+........ ....+..|+|.+|+.+ |..+|++|.
T Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G~YYl~yS~ 195 (274)
T cd08990 153 MLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--GTYYLSYST 195 (274)
T ss_pred ccccCCCcEEEEeccccCCCCCCcccceeEEEEC--CEEEEEEEC
Confidence 9999765443321 1123468999999986 555555554
No 18
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.56 E-value=1.1e-13 Score=141.80 Aligned_cols=169 Identities=21% Similarity=0.240 Sum_probs=120.0
Q ss_pred ccccceecc-cCccc--c-eeEEECCEEEEEeeeCCC-----------CC--CCCCceEEEEEeCCcccceecccccCCC
Q 009698 6 FSLGYHLCD-ENSMI--A-GPLFYKGWYHLFYQYNPD-----------SA--VWGNITWGHAVSADLIHWLYLPIAMVPD 68 (528)
Q Consensus 6 ~Rp~~H~~p-~gw~N--n-g~~~~~G~yHlfyq~~p~-----------~~--~~g~~~wgha~S~Dlv~W~~~p~al~p~ 68 (528)
..|..=+.+ .+... . .+++.+|+|||||++... .+ .|.....+||+|+||+||++.+++|.+.
T Consensus 23 ~~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~ 102 (349)
T cd08992 23 IYPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRG 102 (349)
T ss_pred cCcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCC
Confidence 344444555 55444 3 578899999999986431 11 2346788999999999999999888654
Q ss_pred C--CCCCCcEEEeeEEEccCCeEEEEeccCCCC----CcceEEEEEEcCCCCCccceEEEcCCCceecCCC---------
Q 009698 69 Q--WYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR--------- 133 (528)
Q Consensus 69 ~--~~d~~gv~sGs~v~~~~g~~~~~YTg~~~~----~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~--------- 133 (528)
. .||..++|.++++ ..+|+++|||++.... ..+.+++|+|++.. ..|++. .+||+.+..
T Consensus 103 ~~g~Wd~~~vwaP~Vi-~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~ 176 (349)
T cd08992 103 EKGAYDDRSVFTPEVL-EHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDED 176 (349)
T ss_pred CCCCccccceECcEEE-EECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccC
Confidence 3 5899999999997 5799999999975421 23568999998752 469986 689986521
Q ss_pred ---------CCCCCCccCCeeEEEcCCCcEEEEEEeecC--------CeeEEEEEEcCCCC-CCeec
Q 009698 134 ---------HIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--------KTGISLVYQTTDFK-TYELL 182 (528)
Q Consensus 134 ---------~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~--------~~G~i~ly~S~DL~-~W~~~ 182 (528)
.++...+.||.|+ + .+|+|||++.+... ..-++.+..|+++. -|+..
T Consensus 177 ~~~~~~~~g~wD~~~v~~P~v~-~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 177 NRFLVKKKGSFDSHKVHDPCLF-P-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred ceeEeccCCCcccCceECCEEE-E-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 1345567899995 4 68999999976421 12257788888764 46543
No 19
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.56 E-value=2.3e-13 Score=135.67 Aligned_cols=178 Identities=22% Similarity=0.169 Sum_probs=119.4
Q ss_pred eeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccC----CCCCCCCCcEEEeeEEEccCCeEEEEeccC
Q 009698 21 GPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSATILPDGQIVMLYTGS 96 (528)
Q Consensus 21 g~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~----p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~ 96 (528)
.++.++|+||||+..... ....+..++|+||++|+..+.+|. +....+..++|.++++. .+|+++|+|++.
T Consensus 4 ~v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~y~~~ 78 (271)
T cd08978 4 YILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLYYSVS 78 (271)
T ss_pred cEEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEEEEcc
Confidence 567889999999987643 234689999999999999998875 44445667899999975 689999999997
Q ss_pred CCC-CcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecC--CeeEEEEEEc
Q 009698 97 TDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--KTGISLVYQT 173 (528)
Q Consensus 97 ~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~--~~G~i~ly~S 173 (528)
... ..+.+++|+|+|. .+|.+....+. +.. .....+||.|+ .+++|++||+++.... ..+.+.++++
T Consensus 79 ~~~~~~~~i~~a~s~d~-----~g~~~~~~~~~---~~~-~~~~~iDp~vf-~d~dg~~yl~~~~~~~~~~~~~i~~~~l 148 (271)
T cd08978 79 DFDYNGSGIGVATSEDP-----TGPFEDKVIRP---PTS-NNGNSIDPTVF-KDDDGKYYLYYGSGDPGAGFGGIYISEL 148 (271)
T ss_pred cCCCCcccEEEEECCCC-----CCCccccccCc---Ccc-CCCCccCcceE-EcCCCCEEEEEecccCCCCCCcEEEEEE
Confidence 532 2467899999885 45554321111 111 12467999995 4566999999986531 2456778887
Q ss_pred CCCCCC-eeccccc-ccCCCCCeeeEeeEEEeeecCccceeecC
Q 009698 174 TDFKTY-ELLDEYL-HAVPGTGMWECVDFYPVAINGSVGLDTSA 215 (528)
Q Consensus 174 ~DL~~W-~~~~~l~-~~~~~~g~wECPdlf~l~~~g~~~l~~~~ 215 (528)
++...| .....+. .......+.|||.+|+.+ |..+|++|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g~yyl~ys~ 190 (271)
T cd08978 149 TDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKN--GYYYLTYSA 190 (271)
T ss_pred CcccccccCCceeeeeeccCCCceEccEEEEEC--CEEEEEEEe
Confidence 665444 3222111 111223479999999986 444444443
No 20
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.54 E-value=6.2e-13 Score=134.99 Aligned_cols=175 Identities=17% Similarity=0.086 Sum_probs=119.5
Q ss_pred eeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCC-CCCCCcEEEeeEEEccCCeEEEEeccCCCC
Q 009698 21 GPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIVMLYTGSTDK 99 (528)
Q Consensus 21 g~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~-~~d~~gv~sGs~v~~~~g~~~~~YTg~~~~ 99 (528)
.+++++|+||||+..... ...+.+++|+||+||+.++.++.+.. .|...++|.++++. .+|+++|+|++....
T Consensus 4 ~v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~~~~ 77 (294)
T cd08991 4 FVLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSANDRD 77 (294)
T ss_pred eEEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEeccCC
Confidence 467889999999876543 23588999999999999998877655 47788999999875 789999999987543
Q ss_pred -CcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCC---eeEEEEEEcCC
Q 009698 100 -SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK---TGISLVYQTTD 175 (528)
Q Consensus 100 -~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~---~G~i~ly~S~D 175 (528)
..+.+++|+|+|.. ..|++....++ .. + ....||.|+ .+++|+|||+++..... .+..+.--|.|
T Consensus 78 ~~~~~i~~a~s~~p~----gp~~~~~~~~~-~~--~---~~~iD~~vf-~d~dG~~yl~~~~~~~~~~~~~i~~~~l~~d 146 (294)
T cd08991 78 EKTEHIGVAVSDSPL----GPFRDIKKPPI-DF--E---PKSIDAHPF-IDDDGKPYLYYSRNNYGNRVSDIYGTELVDD 146 (294)
T ss_pred CCcceEEEEEeCCCC----CCCCcCCCCcc-cC--C---CcccCCceE-ECCCCCEEEEEEecCCCCcccceEEEEEccc
Confidence 45678999998752 57877532232 21 1 346799995 45679999999864211 23333445788
Q ss_pred CCCCeeccccc----cc--------------CCCCCeeeEeeEEEeeecCccceeec
Q 009698 176 FKTYELLDEYL----HA--------------VPGTGMWECVDFYPVAINGSVGLDTS 214 (528)
Q Consensus 176 L~~W~~~~~l~----~~--------------~~~~g~wECPdlf~l~~~g~~~l~~~ 214 (528)
+.+|....... .. .....+.|+|.+++.+ |..+|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g~yyl~ys 201 (294)
T cd08991 147 KLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--GRYYLTYS 201 (294)
T ss_pred eeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--CEEEEEEE
Confidence 87775211100 00 0112379999999996 44445544
No 21
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.48 E-value=1.1e-12 Score=133.34 Aligned_cols=166 Identities=16% Similarity=0.195 Sum_probs=117.5
Q ss_pred ceeEEE--CCEEEEEee-eCC---CC-CCCC-CceEEEEEeCC-cccceecccccCCCCCCCCCcEEEeeEEEccCCeEE
Q 009698 20 AGPLFY--KGWYHLFYQ-YNP---DS-AVWG-NITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIV 90 (528)
Q Consensus 20 ng~~~~--~G~yHlfyq-~~p---~~-~~~g-~~~wgha~S~D-lv~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~ 90 (528)
..+++. +|+|||||- ... .. ..|. ...+|+|+|+| |+||++++.++.++..+....+|.+.++. .+|+++
T Consensus 14 P~i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~G~y~ 92 (294)
T cd08984 14 PTIIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HGGVYH 92 (294)
T ss_pred CEEEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-ECCEEE
Confidence 677887 789999993 211 11 1232 35799999999 99999998776665566677799999975 699999
Q ss_pred EEeccCCC-----CCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCe
Q 009698 91 MLYTGSTD-----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 165 (528)
Q Consensus 91 ~~YTg~~~-----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~ 165 (528)
|||+.... .....+++|+|+|. .+|++.+ ++..+ .....||.|+ +..+|+|+|++.... .+
T Consensus 93 myys~~~~~~~~~~~~~~i~~a~S~Dl-----~~w~~~~--~~~~~-----~~~~iD~~vf-~~~dg~~yl~y~~~~-~~ 158 (294)
T cd08984 93 MYVTYIPGVPPDWGGPRRIVHYTSPNL-----WDWTFVG--RVDLD-----SDRVIDACVF-KLPDGRWRMWYKDER-RG 158 (294)
T ss_pred EEEEecCCCCcccCCCcEEEEEECCCc-----CcceECC--ccccC-----CCCcEEeEEE-EeCCCEEEEEEECCC-CC
Confidence 99997532 12346788999884 7898763 33211 1245799994 546699999996432 22
Q ss_pred eEEEEEEcCCCCCCeecccccccCCCCCeeeEeeEEEee
Q 009698 166 GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 204 (528)
Q Consensus 166 G~i~ly~S~DL~~W~~~~~l~~~~~~~g~wECPdlf~l~ 204 (528)
..+.+..|+|+.+|+..+++.. ...-|+|.+|+.+
T Consensus 159 ~~~~~a~s~D~~~w~~~~~~i~----~~~~EgP~v~k~~ 193 (294)
T cd08984 159 STTYAADSEDLYHWTVEGPVLG----DRPHEGPNVFRWK 193 (294)
T ss_pred eEEEEEECCCCCEEEeCCcccc----CCCCCCCCeeEEC
Confidence 3456778999999998665432 1135999999975
No 22
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.47 E-value=4.6e-12 Score=128.37 Aligned_cols=174 Identities=20% Similarity=0.122 Sum_probs=116.3
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCC-------CCCCcEEEeeEEEccCCeEEEE
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-------YDINGVWTGSATILPDGQIVML 92 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~-------~d~~gv~sGs~v~~~~g~~~~~ 92 (528)
..+++++|+||||+... ++++++|+||+||+..+.+|.+... ....++|.+.++. .+|+++||
T Consensus 4 P~v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~yyl~ 73 (288)
T cd08998 4 PSIIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNGKYYLY 73 (288)
T ss_pred CeEEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECCEEEEE
Confidence 45788999999999864 5899999999999999988765432 3456799999874 69999999
Q ss_pred eccCCCC-CcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEEE
Q 009698 93 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 171 (528)
Q Consensus 93 YTg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~ly 171 (528)
|++.... ....+++|+|++.. ...|++. +||+...++......+||.|| .+++|++||++++.. .| +.+.
T Consensus 74 ys~~~~~~~~~~i~va~s~~~~---~gpw~~~--~~v~~~~~~~~~~~~iDp~vf-~d~dG~~Yl~~~~~~--~~-i~~~ 144 (288)
T cd08998 74 YSVSTFGSNRSAIGLATSDTLP---DGPWTDH--GIVIESGPGRDDPNAIDPNVF-YDEDGKLWLSFGSFW--GG-IFLV 144 (288)
T ss_pred EEEEeCCCCceEEEEEEeCCCC---CCCCEEc--ceeeecCCCCCCcccccCCEE-EcCCCCEEEEeeecc--CC-EEEE
Confidence 9986532 34567899998740 1589875 588865332223467899995 456899999998642 12 2222
Q ss_pred E-cCC---CCCCeeccc-ccccCCCCCeeeEeeEEEeeecCccceeec
Q 009698 172 Q-TTD---FKTYELLDE-YLHAVPGTGMWECVDFYPVAINGSVGLDTS 214 (528)
Q Consensus 172 ~-S~D---L~~W~~~~~-l~~~~~~~g~wECPdlf~l~~~g~~~l~~~ 214 (528)
+ ++| ...|..... +.......+..|-|.+|+.+ |..+|++|
T Consensus 145 ~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g~YYl~~S 190 (288)
T cd08998 145 ELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--GYYYLFVS 190 (288)
T ss_pred EeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--CEEEEEEE
Confidence 2 222 234421111 21111123468999999886 54444444
No 23
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.44 E-value=4e-13 Score=137.18 Aligned_cols=163 Identities=22% Similarity=0.237 Sum_probs=114.8
Q ss_pred cccceeEEECCE--EEEEeeeCCCCCCCCCceEEEEEeCCcccceecc-cccCCCCCCCCCcEEEeeEEEccCCeEEEEe
Q 009698 17 SMIAGPLFYKGW--YHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQWYDINGVWTGSATILPDGQIVMLY 93 (528)
Q Consensus 17 w~Nng~~~~~G~--yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p-~al~p~~~~d~~gv~sGs~v~~~~g~~~~~Y 93 (528)
-+|.|++.++|. |||+|...-.. .+..+.|+|.|+|.+||+..+ ++|.|+..|+..||....++. .+|+++|+|
T Consensus 32 vfNpgai~~~~~~R~~l~yr~~~~~--~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~-i~d~yymtY 108 (312)
T PF04041_consen 32 VFNPGAIVFDGGLRVYLLYRAYGSD--IGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTK-IDDTYYMTY 108 (312)
T ss_dssp EEEEEEEEETTE--EEEEEEEEESS--SSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEE-ETTEEEEEE
T ss_pred EEcCcEEEECCeeEEEEEEEeECCC--CceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEE-ECCEEEEEE
Confidence 344688877776 99999765432 123489999999999999886 789999999999999999974 789999999
Q ss_pred ccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCC---CCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEE
Q 009698 94 TGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLV 170 (528)
Q Consensus 94 Tg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~---~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~l 170 (528)
|+..... ..+++|+|+|. .+|+|.. +++.... ......-+|-.+|-.+.+|+|+|+.+ .+.+.+
T Consensus 109 ta~~~~~-~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~i~l 175 (312)
T PF04041_consen 109 TAYSGKG-PRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPSIWL 175 (312)
T ss_dssp EEEESSS-EEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSSBEE
T ss_pred EEecCCC-cccceEEccch-----HhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCCEEE
Confidence 9987543 57899999995 8999984 3332211 00111236666643356899999988 346889
Q ss_pred EEcCCCCCCeeccc-ccccCCCCCeeeE
Q 009698 171 YQTTDFKTYELLDE-YLHAVPGTGMWEC 197 (528)
Q Consensus 171 y~S~DL~~W~~~~~-l~~~~~~~g~wEC 197 (528)
.+|+||++|+.... +... ..+.||+
T Consensus 176 a~S~Dl~~W~~~~~~~~~~--~~~~~d~ 201 (312)
T PF04041_consen 176 AYSPDLIHWGNHREPLLSP--RPGWWDS 201 (312)
T ss_dssp EEESSSSSEEEEBETSB----STTSSCS
T ss_pred EecCCcccccccccccccC--CCCcChh
Confidence 99999999988655 3322 2245765
No 24
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.38 E-value=2.4e-11 Score=121.68 Aligned_cols=175 Identities=18% Similarity=0.109 Sum_probs=119.2
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCC----CCCCCcEEEeeEEEc-cCCeEEEEec
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ----WYDINGVWTGSATIL-PDGQIVMLYT 94 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~----~~d~~gv~sGs~v~~-~~g~~~~~YT 94 (528)
.++++++|+|++|--....+.. ....|-..+|+||+||+.++.+|.+.. .+...++|.++++.. .+|+++|+|+
T Consensus 6 ~~i~~~~~~yY~ygs~~~~~~~-~~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~~~ 84 (265)
T cd08985 6 GGILKVGGTYYWYGENKGGGDT-AFGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMWMH 84 (265)
T ss_pred CceEEECCEEEEEEEecCCCCc-ccccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEEEE
Confidence 4788899999999876543211 135688999999999999999987764 345567899999764 3699999999
Q ss_pred cCCCC-CcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEEEE-
Q 009698 95 GSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ- 172 (528)
Q Consensus 95 g~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~ly~- 172 (528)
+.... ....+++|+|++.. ..|+... .+. +.+ ...|||.|| .+++|++||++++..+ ..+.+.+
T Consensus 85 ~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~~---~~~~Dp~vf-~DdDG~~Yl~~~~~~~--~~i~i~~L 150 (265)
T cd08985 85 IDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PLG---YQSRDFGLF-VDDDGTAYLLYSDRDN--SDLYIYRL 150 (265)
T ss_pred eCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CCC---CCccCCceE-EcCCCCEEEEEecCCC--CceEEEEe
Confidence 86432 24578899997642 5677642 221 112 357999995 4688999999986532 2344555
Q ss_pred cCCCCCCeecccccccCCCCCeeeEeeEEEeeecCccceeec
Q 009698 173 TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTS 214 (528)
Q Consensus 173 S~DL~~W~~~~~l~~~~~~~g~wECPdlf~l~~~g~~~l~~~ 214 (528)
++|+..+.. ..... ......|||.+|+.+ |..+|++|
T Consensus 151 ~~d~~~~~~--~~~~~-~~~~~~EaP~i~K~~--g~YYL~~S 187 (265)
T cd08985 151 TDDYLSVTG--EVTTV-FVGAGREAPAIFKRN--GKYYLLTS 187 (265)
T ss_pred CCCcccccc--eEEEc-cCCCccccceEEEEC--CEEEEEEc
Confidence 467777753 22111 112368999999996 55555554
No 25
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.30 E-value=1.6e-10 Score=118.64 Aligned_cols=167 Identities=18% Similarity=0.187 Sum_probs=114.6
Q ss_pred ceeEEECCEEEEEeeeCCCC-CCCCCceEEEEEeCCcc-cceecc-cccCCCC------------------CCCCCcEEE
Q 009698 20 AGPLFYKGWYHLFYQYNPDS-AVWGNITWGHAVSADLI-HWLYLP-IAMVPDQ------------------WYDINGVWT 78 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~-~~~g~~~wgha~S~Dlv-~W~~~p-~al~p~~------------------~~d~~gv~s 78 (528)
..+++++|+|||||+..-.. ..-...+.|+|+|++.. .|+++. +.|.|.. .||..++..
T Consensus 115 P~Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~~v~~ 194 (349)
T cd08992 115 PEVLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSHKVHD 194 (349)
T ss_pred cEEEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccCceEC
Confidence 46777899999999853211 11123578888888876 698765 5566642 367777877
Q ss_pred eeEEEccCCeEEEEeccCCC-------CCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCC
Q 009698 79 GSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPD 151 (528)
Q Consensus 79 Gs~v~~~~g~~~~~YTg~~~-------~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~ 151 (528)
.+++ ..+|+++|||+|+.. ...+.+++|+|++.. ..|+|.+.|||+... + ..+| |+ ..
T Consensus 195 P~v~-~~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GPf~r~~~nPi~~~~------~--~~~~-~~-~~ 259 (349)
T cd08992 195 PCLF-PFNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GPYVKSPYNPITNSG------H--ETCV-WQ-YK 259 (349)
T ss_pred CEEE-EECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CCCEeCCCCcccCCC------C--ceEE-Ee-cC
Confidence 7765 579999999999752 124678999998863 689999899998521 2 2477 87 55
Q ss_pred CcE-EEEEEeecCCeeEEEEEEcCCCCCCeecccccccCCCCCeeeEeeEEEee
Q 009698 152 GKW-RLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 204 (528)
Q Consensus 152 g~~-~m~~g~~~~~~G~i~ly~S~DL~~W~~~~~l~~~~~~~g~wECPdlf~l~ 204 (528)
+.+ .|+..-..+ .+. +..|+|.++|+....+...+...|...|||-+.-+
T Consensus 260 ~~~~~~~~~d~~~-~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 260 GGIAAMLTTDGPE-KNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred CceEEEEeccCCC-Cce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 667 565443222 343 68899999999877665433344567777766554
No 26
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.26 E-value=9.3e-11 Score=117.32 Aligned_cols=132 Identities=21% Similarity=0.249 Sum_probs=94.5
Q ss_pred ceeEEEC-CEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccC-------CCCCCCCCcEEEeeEEEccC-CeEE
Q 009698 20 AGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV-------PDQWYDINGVWTGSATILPD-GQIV 90 (528)
Q Consensus 20 ng~~~~~-G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~-------p~~~~d~~gv~sGs~v~~~~-g~~~ 90 (528)
..+++++ |+|||||...... ......+++|+|+|+++|+..+..+. +...++...+.++.++.+++ |+++
T Consensus 69 p~v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~ 147 (276)
T cd08979 69 PSVVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWR 147 (276)
T ss_pred ceEEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEE
Confidence 4566677 9999999976532 23457899999999999999875542 22334556688898876433 8999
Q ss_pred EEeccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEee
Q 009698 91 MLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 161 (528)
Q Consensus 91 ~~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~ 161 (528)
|+|++........+.+|.|.|+ .+|++.+..+.. ..+.....+.+|.+ ++ .+|+|+|++.+.
T Consensus 148 m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~~~--~~~~~~~~~e~P~~-~~-~~g~~~l~~~~~ 209 (276)
T cd08979 148 MYYGARDADERGAIGLATSPDL-----IHWTPVPPPPGP--RTGYDDGQLEVPQV-VK-IDGRWYLLYSGR 209 (276)
T ss_pred EEEEeEccCCCcEEEEEECCCC-----CcceECCCCCCC--CCcccCCcCccceE-EE-ECCEEEEEEEec
Confidence 9999876444567889999985 899987433311 12223456789999 54 579999999865
No 27
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.25 E-value=2.2e-10 Score=117.38 Aligned_cols=180 Identities=13% Similarity=0.219 Sum_probs=117.2
Q ss_pred ceeEEECCEEEEEeeeCCCC---------CCCCCceEEEEEeCCcccceecccccCC--CCCCCCCcEEEeeEEEccC--
Q 009698 20 AGPLFYKGWYHLFYQYNPDS---------AVWGNITWGHAVSADLIHWLYLPIAMVP--DQWYDINGVWTGSATILPD-- 86 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~---------~~~g~~~wgha~S~Dlv~W~~~p~al~p--~~~~d~~gv~sGs~v~~~~-- 86 (528)
..++.++|+|+||....... ..+....+-..+|+||+||+.++.+|.| ...|. .++|.+.++. .+
T Consensus 12 P~~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v~~-~~~~ 89 (311)
T cd09003 12 PTAVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSIAV-KKIN 89 (311)
T ss_pred CCeEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCceEE-eccC
Confidence 55678899999998764322 1122356889999999999999988863 23453 4789999974 56
Q ss_pred --CeEEEEeccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCC-CCCCCCC-ccCCeeEEEcCCCcEEEEEEeec
Q 009698 87 --GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIGPKD-FRDPTTAWAGPDGKWRLTIGSKI 162 (528)
Q Consensus 87 --g~~~~~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~-~~~~~~~-~RDP~V~~~~~~g~~~m~~g~~~ 162 (528)
|+++|+|+.. ...+++|+|++.. ..|+.....|++... ++..... ..||.||+ +++|++||++++..
T Consensus 90 ~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~-DdDG~~Yl~~g~~~ 160 (311)
T cd09003 90 GKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFV-DDDGQGYLYFGGGV 160 (311)
T ss_pred CCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeEE-CCCCCEEEEECCcc
Confidence 9999999864 2357899987752 689875456777532 2221112 37999954 57899999998532
Q ss_pred C-----CeeEEEEEE-cCCCCCCeecccccccCCCCCeeeEeeEEEeeecCccceeecC
Q 009698 163 G-----KTGISLVYQ-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSA 215 (528)
Q Consensus 163 ~-----~~G~i~ly~-S~DL~~W~~~~~l~~~~~~~g~wECPdlf~l~~~g~~~l~~~~ 215 (528)
. ..+.+.+.+ ++|+..-. ++...- .....+|.|.+++.+ |..+|.+|.
T Consensus 161 ~~~~~~~~~~i~i~~l~~D~~~~~--g~~~~i-~~~~~~Egp~~~K~~--G~YYL~ys~ 214 (311)
T cd09003 161 PGGRWANPNTARVIKLGDDMISVD--GSAVTI-DAPYFFEASGLHKIN--GTYYYSYCT 214 (311)
T ss_pred CCCccccCCCEEEEEeCCCceecc--CCceEc-cCCCceEeeeEEEEC--CEEEEEEeC
Confidence 1 112344454 45665432 322111 111469999999986 555555543
No 28
>PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B ....
Probab=99.25 E-value=5.2e-11 Score=98.37 Aligned_cols=73 Identities=33% Similarity=0.467 Sum_probs=52.5
Q ss_pred ceEEEEEEcCCCCceEEEEEEeccCCCCCeeEEEeecCCCCCCCCccccccce---EEeeec-CCeEEEEEEEeCCeEEE
Q 009698 395 PFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGS---KVPVLQ-GEKLSMRILVDHSIVES 470 (528)
Q Consensus 395 ~~gl~v~~~~~~~~~t~i~~~~~~~~~g~~~~~~~Dr~rs~~~~~~~~~~~g~---~~~~~~-~~~~~LrIfvD~S~iEV 470 (528)
.+||.|+++.+.++.|.|.|+...+ .+++||++++.. ..... ++. ..++.. ++.++||||||+|+|||
T Consensus 10 ~~g~~l~~s~~~~e~~~i~~d~~~~------~l~vDR~~s~~~-~~~~~-~~~~~~~~~~~~~~~~l~L~i~vD~SsvEi 81 (86)
T PF08244_consen 10 SFGLRLRASNDGGEETSIGYDPANG------TLTVDRTNSGIN-DFSEE-FGTFVRSAPLDLGDKILKLRIFVDRSSVEI 81 (86)
T ss_dssp EEEEEEEEETTSSSEEEEEEETTTT------EEEEEETTSSTT-SCCCE-EEEEEEEEETTTTESEEEEEEEEETTEEEE
T ss_pred CeEEEEEECCCccEEEEEEEECCCC------EEEEeCCCCccc-ccccc-cCcceEEeeccCCCCcEEEEEEEeCCEEEE
Confidence 5899999888888999999986543 389999998732 11111 222 122222 35679999999999999
Q ss_pred EEeCC
Q 009698 471 FGQGG 475 (528)
Q Consensus 471 F~N~G 475 (528)
|+|||
T Consensus 82 FvNdG 86 (86)
T PF08244_consen 82 FVNDG 86 (86)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 99997
No 29
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.22 E-value=5.4e-10 Score=113.23 Aligned_cols=171 Identities=20% Similarity=0.156 Sum_probs=109.6
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCC--CC----CCCcEEEeeEEEccCCeEEEEe
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ--WY----DINGVWTGSATILPDGQIVMLY 93 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~--~~----d~~gv~sGs~v~~~~g~~~~~Y 93 (528)
..+++++|+|+||...... ...+..++|+||+||+.++.+|.+.. .+ ...++|.+.++. .+|+++|+|
T Consensus 11 P~i~~~~~~yy~~~t~~~~-----~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~yy~yy 84 (288)
T cd09000 11 PSICRVGDDYYLVTSSFEY-----FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HDGTFYLIT 84 (288)
T ss_pred CCEEEECCEEEEEECCccc-----CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-ECCEEEEEE
Confidence 6788899999999532221 23589999999999999998875433 11 345799999975 699999999
Q ss_pred ccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecC-----CeeEE
Q 009698 94 TGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-----KTGIS 168 (528)
Q Consensus 94 Tg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~-----~~G~i 168 (528)
++........+++|+|++.. ..|+. |++.. ....||.||+ +++|++||+++.... ..+.+
T Consensus 85 ~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~-d~dG~~Y~~~~~~~~~~~~~~~~~i 149 (288)
T cd09000 85 TNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFF-DDDGKVYLVGNGWDERRGYNGHGGI 149 (288)
T ss_pred EecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeE-cCCCCEEEEecccCCccccCCCCcE
Confidence 98753333456788887652 45652 33321 1458999954 578999999875421 12334
Q ss_pred EEEEcCCCCCCeeccccc--ccCCCCCeeeEeeEEEeeecCccceeec
Q 009698 169 LVYQTTDFKTYELLDEYL--HAVPGTGMWECVDFYPVAINGSVGLDTS 214 (528)
Q Consensus 169 ~ly~S~DL~~W~~~~~l~--~~~~~~g~wECPdlf~l~~~g~~~l~~~ 214 (528)
.+.+. |...|+..+... .........|+|.+|+.+ |..+|++|
T Consensus 150 ~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g~YYl~ys 194 (288)
T cd09000 150 WLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--GWYYLLIA 194 (288)
T ss_pred EEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC--CEEEEEEe
Confidence 44443 333455443321 111112368999999985 54444444
No 30
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.19 E-value=8.7e-10 Score=111.10 Aligned_cols=165 Identities=12% Similarity=0.069 Sum_probs=109.6
Q ss_pred ceeEEE--CCEEEEEeeeCCCCCCC-CCceEEEEEeCCcccceecccccCCCCCCCCCcEEEeeEEEcc-CCeEEEEecc
Q 009698 20 AGPLFY--KGWYHLFYQYNPDSAVW-GNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILP-DGQIVMLYTG 95 (528)
Q Consensus 20 ng~~~~--~G~yHlfyq~~p~~~~~-g~~~wgha~S~Dlv~W~~~p~al~p~~~~d~~gv~sGs~v~~~-~g~~~~~YTg 95 (528)
.-++++ +|+||||+-..-....+ +...+.+++|+||+||+..+.++.... ...++|.+.++.++ +|+++|+|+.
T Consensus 21 P~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~y~~~~s~ 98 (276)
T cd08983 21 PFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQYVVYWSS 98 (276)
T ss_pred CeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCeEEEEEec
Confidence 677777 89999999754321112 356799999999999999886642221 24568999987654 6999999998
Q ss_pred CCCC---Cc--ceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEE
Q 009698 96 STDK---SV--QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLV 170 (528)
Q Consensus 96 ~~~~---~~--~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~l 170 (528)
.... .. ..+..+.+.|. .+|+.. .|++.+ + ....|+.|+ + .+|+|||++....+ ..|.+
T Consensus 99 ~~~~~~~~~~~~~i~~~tt~Df-----~tft~p--~~~~~~--~---~~~ID~~v~-~-~~g~~Yl~~k~~~~--~~i~~ 162 (276)
T cd08983 99 RLYDNTGGFYNYRLYATTTSDF-----VTFTEP--KVWIDL--G---ANVIDTTVV-K-VGGTYYRFYKNEGS--KDIEL 162 (276)
T ss_pred ccCCCCCCCccEEEEEEecCcc-----cccCCC--eEeecC--C---CCeEeeEEE-E-eCCEEEEEEecCCC--CcEEE
Confidence 7542 11 22333433353 688752 566652 2 356899994 4 45999999875322 34777
Q ss_pred EEcCCCC-CCeecccccccCCCCCeeeEeeEEEee
Q 009698 171 YQTTDFK-TYELLDEYLHAVPGTGMWECVDFYPVA 204 (528)
Q Consensus 171 y~S~DL~-~W~~~~~l~~~~~~~g~wECPdlf~l~ 204 (528)
.+|++|. .|+...... .......|-|.+|+++
T Consensus 163 ~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~ 195 (276)
T cd08983 163 ARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLN 195 (276)
T ss_pred EEeCCCCCCceEecccc--cCCCCceeCCeEEEEC
Confidence 8899876 676654321 1112368999999997
No 31
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.18 E-value=1.4e-09 Score=109.64 Aligned_cols=175 Identities=19% Similarity=0.186 Sum_probs=117.5
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCCCC--CCcE-EEeeEEEccCCeEEEEeccC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD--INGV-WTGSATILPDGQIVMLYTGS 96 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~d--~~gv-~sGs~v~~~~g~~~~~YTg~ 96 (528)
..++.++|.|+||+...+.. ..+..++|+||+||+..+.+|.+...++ ..+. |.+.++ ..+|+++|+|+..
T Consensus 13 P~i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yy~y~~~~ 86 (286)
T PF04616_consen 13 PSIVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIH-YINGKYYMYYSDS 86 (286)
T ss_dssp EEEEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEE-EETTEEEEEEEEE
T ss_pred CEEEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEE-EcCCeEEEEEEcc
Confidence 57788999999999876543 4589999999999999997776655333 2333 999987 5799999999932
Q ss_pred CCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecC--CeeEEEEEE-c
Q 009698 97 TDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--KTGISLVYQ-T 173 (528)
Q Consensus 97 ~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~--~~G~i~ly~-S 173 (528)
.......+++|+|++.. ..|+... .+.+. .....||.|+ .+++|++||+++.... ..+.+.+.+ +
T Consensus 87 ~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~------~~~~iD~~vf-~d~dG~~Yl~~~~~~~~~~~~~i~~~~l~ 154 (286)
T PF04616_consen 87 GGDAGSGIGVATADSPD----GPWTDPG-KIPIP------GGNSIDPSVF-VDDDGKYYLYYGSWDNGDPGGGIYIAELD 154 (286)
T ss_dssp STSTTEEEEEEEESSTT----S-EEEEE-EEEEE------SSSSSSEEEE-EETTSEEEEEEEESTTTSSEEEEEEEEEE
T ss_pred CCCCCcceeEEEeCCcc----ccccccc-ceeec------cccccCceEE-EecCCCcEEeCcccCCCccceeEEeeccc
Confidence 22334568899998753 6888752 22222 1356899995 4567999999987632 234455555 4
Q ss_pred CCCCCCeecc-ccc-ccC--CCCCeeeEeeEEEeeecCccceeec
Q 009698 174 TDFKTYELLD-EYL-HAV--PGTGMWECVDFYPVAINGSVGLDTS 214 (528)
Q Consensus 174 ~DL~~W~~~~-~l~-~~~--~~~g~wECPdlf~l~~~g~~~l~~~ 214 (528)
+|...+.... ... ... ......|+|.+|+.+ |..+|++|
T Consensus 155 ~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g~yYl~~s 197 (286)
T PF04616_consen 155 PDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--GKYYLFYS 197 (286)
T ss_dssp TTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--TEEEEEEE
T ss_pred CccccccCcccccccccccccCCccccceEEEEcC--CCEEEEEe
Confidence 6676666544 222 211 123479999999986 44444444
No 32
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.09 E-value=4e-09 Score=107.07 Aligned_cols=130 Identities=18% Similarity=0.120 Sum_probs=90.6
Q ss_pred ceeEEE--CCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCC-CCCCCcEEEeeEEEccCCeEEEEeccC
Q 009698 20 AGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIVMLYTGS 96 (528)
Q Consensus 20 ng~~~~--~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~-~~d~~gv~sGs~v~~~~g~~~~~YTg~ 96 (528)
..++++ +|+||||.-............+.+.+|+||+||+..+.++.+.. .|...++|.+.++ ..+|+++|||+..
T Consensus 9 P~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~-~~~G~yyly~s~~ 87 (291)
T cd08981 9 PFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVH-EYKGRYYMFATFH 87 (291)
T ss_pred CEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeee-eeCCEEEEEEEec
Confidence 467777 99999998654322111124589999999999999998886544 3555679999986 5799999999876
Q ss_pred CCC-CcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEe
Q 009698 97 TDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 160 (528)
Q Consensus 97 ~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~ 160 (528)
... ....+.+|+|++. +..|+.....|+... + ....||.+| .+++|++||+++.
T Consensus 88 ~~~~~~~~~~va~s~~p----~GP~~~~~~~~~~~~--~---~~~iDp~~f-~DdDG~~Yl~~~~ 142 (291)
T cd08981 88 NPGGERRGTAILVSDSP----EGPFVPHSDGPVTPE--D---WMCLDGTLY-VDEDGKPWMVFCH 142 (291)
T ss_pred cCCCceeeEEEEECCCC----CCCCEeCCCCccCCC--C---CceEcCceE-EcCCCCEEEEEEe
Confidence 432 2234678888764 257876543454321 1 235799994 4578999999864
No 33
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.03 E-value=1.1e-08 Score=103.28 Aligned_cols=175 Identities=18% Similarity=0.160 Sum_probs=107.8
Q ss_pred eeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCCC-------CCCcEEEeeEEEccCCeEEEEe
Q 009698 21 GPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY-------DINGVWTGSATILPDGQIVMLY 93 (528)
Q Consensus 21 g~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~-------d~~gv~sGs~v~~~~g~~~~~Y 93 (528)
.++.++|+|+||.-. + .+..++|+||+||+..+.+|.+...| ...++|.+.++. .+|+++|||
T Consensus 4 ~vi~~~~~YY~~~T~-~--------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~yylyy 73 (279)
T cd08988 4 VIIKEGDTWYVFGTG-P--------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGKFYLYY 73 (279)
T ss_pred EEEEECCEEEEEEec-C--------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCEEEEEE
Confidence 467789999998653 1 37899999999999999888654433 235799999874 689999999
Q ss_pred ccCCCC-CcceEEEEEEcCCCCCcc-ceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEEE
Q 009698 94 TGSTDK-SVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 171 (528)
Q Consensus 94 Tg~~~~-~~~~q~lA~s~D~~d~~l-~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~ly 171 (528)
++.... ....+++|+|++...+.- ..|++ ..|++..... ......||.+|+ +++|++||++++.. .| +.+.
T Consensus 74 s~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~-DdDG~~Yl~~g~~~--~g-i~~~ 146 (279)
T cd08988 74 SVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIF-DQHGQPWLSFGSFW--GG-IKLF 146 (279)
T ss_pred EeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEE-cCCCCEEEEecccC--CC-EEEE
Confidence 986432 235778999987531100 11432 2466553211 112457999965 57899999998532 23 3333
Q ss_pred E-cCCCCCCeeccc---ccccCCCCCeeeEeeEEEeeecCccceeec
Q 009698 172 Q-TTDFKTYELLDE---YLHAVPGTGMWECVDFYPVAINGSVGLDTS 214 (528)
Q Consensus 172 ~-S~DL~~W~~~~~---l~~~~~~~g~wECPdlf~l~~~g~~~l~~~ 214 (528)
+ +.|+..-...+. +..........|-|-+++.+ |..+|++|
T Consensus 147 eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g~YYl~~S 191 (279)
T cd08988 147 ELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--DYYYLFVS 191 (279)
T ss_pred EECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--CeEEEEEE
Confidence 3 445443211122 11111112367999999885 54444444
No 34
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.01 E-value=4.1e-09 Score=105.70 Aligned_cols=98 Identities=21% Similarity=0.298 Sum_probs=75.6
Q ss_pred eeEEEccCCeEEEEeccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecC--CCCCCCCCccCCeeEEEcCCCcEEE
Q 009698 79 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP--PRHIGPKDFRDPTTAWAGPDGKWRL 156 (528)
Q Consensus 79 Gs~v~~~~g~~~~~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~--~~~~~~~~~RDP~V~~~~~~g~~~m 156 (528)
..++ ..+|+++|||++........+++|+|.|+ ++|++.+ +|++.+ ...++...++||.|+ + .+|+|+|
T Consensus 3 P~v~-~~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~m 73 (268)
T cd08993 3 PAVV-YDNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYYI 73 (268)
T ss_pred CeEE-EECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEEE
Confidence 4565 47999999999876555678999999995 8999975 555543 223456778999994 4 6899999
Q ss_pred EEEeec--CCeeEEEEEEcCCCCCCeecccc
Q 009698 157 TIGSKI--GKTGISLVYQTTDFKTYELLDEY 185 (528)
Q Consensus 157 ~~g~~~--~~~G~i~ly~S~DL~~W~~~~~l 185 (528)
++++.. ....++.+++|+|+.+|++.+..
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~ 104 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGTS 104 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEeccc
Confidence 998864 34557889999999999998754
No 35
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=98.93 E-value=4.1e-08 Score=98.57 Aligned_cols=169 Identities=17% Similarity=0.137 Sum_probs=105.4
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCCC------CCCcEEEeeEEEccCCeEEEEe
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY------DINGVWTGSATILPDGQIVMLY 93 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~------d~~gv~sGs~v~~~~g~~~~~Y 93 (528)
..++.++|+|+||+..... .......+|+||+||+..+.++.....+ ...++|.+.++ ..+|+++|+|
T Consensus 11 P~ii~~~~~yY~~~t~~~~-----~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~G~yy~yy 84 (269)
T cd08989 11 PSIIRAGDDYYMASSTFEW-----FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLS-YYDGKFWLIY 84 (269)
T ss_pred CcEEEECCeEEEEECcccc-----CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEE-EECCEEEEEE
Confidence 5778899999999854221 1236788999999999998777543211 24579999986 4799999999
Q ss_pred ccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEEEE-
Q 009698 94 TGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ- 172 (528)
Q Consensus 94 Tg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~ly~- 172 (528)
+.........+++|++++.. ..|+. |+... ....||.||. +++|+.||+.+.. +.+.+.+
T Consensus 85 ~~~~~~~~~~i~va~sd~~~----Gpw~~----~~~~~------~~~IDp~~f~-D~dG~~Yl~~~~~----~~i~l~~l 145 (269)
T cd08989 85 TAVKVWKDCHNYLFTAEDIT----GPWSR----PIFLN------YGGFDPSLFH-DDDGKKYLINMGW----SGIRLQEY 145 (269)
T ss_pred eccccCCCceEEEEEECCCC----CCCcC----CEECC------CCcccCceEE-cCCCCEEEEecCC----CcEEEEEE
Confidence 98743334567889887653 45653 44321 1348999954 5899999998742 1233333
Q ss_pred cCCCCCC--eecccccccCCCCCeeeEeeEEEeeecCccceeecC
Q 009698 173 TTDFKTY--ELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSA 215 (528)
Q Consensus 173 S~DL~~W--~~~~~l~~~~~~~g~wECPdlf~l~~~g~~~l~~~~ 215 (528)
+.|+..= +...............|-|.+++.+ |..+|++|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--G~YYl~~S~ 188 (269)
T cd08989 146 SPAEKKLIGKPLNKVIIKGTDDGLTEGPHLYKIN--GKYYLTTAE 188 (269)
T ss_pred ChhhCCCCCCceeEEEecCCCCCccccceEEEEC--CEEEEEEee
Confidence 2332210 0000001111122368999999875 555565554
No 36
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=98.92 E-value=1.4e-08 Score=100.31 Aligned_cols=154 Identities=21% Similarity=0.233 Sum_probs=114.5
Q ss_pred cccceeEEECCEEEEEeeeCC--CCCCCCCceEEEEEeCCccc-ceecc-cccCC-CCCCCCCcEEEeeEEEccCCeEEE
Q 009698 17 SMIAGPLFYKGWYHLFYQYNP--DSAVWGNITWGHAVSADLIH-WLYLP-IAMVP-DQWYDINGVWTGSATILPDGQIVM 91 (528)
Q Consensus 17 w~Nng~~~~~G~yHlfyq~~p--~~~~~g~~~wgha~S~Dlv~-W~~~p-~al~p-~~~~d~~gv~sGs~v~~~~g~~~~ 91 (528)
-.|.++++.++++||+|+--- +...-...|.+.|.|+|+++ |+-.+ +.+.| ..+++.-||.+..++ ..+|+++|
T Consensus 31 vFNpav~~~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt-~I~~~y~m 109 (314)
T COG2152 31 VFNPAVVLVGGELLLLYRVVEGYYEDHSSISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVT-KIGGRYYM 109 (314)
T ss_pred EecceeEEECCEEEEEEEEeccccccCccceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEE-EECCEEEE
Confidence 344688999999999999710 01111457899999999999 99776 78899 657788899999997 58999999
Q ss_pred EeccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeec-CC--eeEE
Q 009698 92 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GK--TGIS 168 (528)
Q Consensus 92 ~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~-~~--~G~i 168 (528)
.|||.+.. .+..++|++.|- .+|+|. .+++.+ +.||-.++=+..+|+|.|+.--.. +. .+.+
T Consensus 110 tYTa~s~~-g~~~~la~t~~f-----~n~~ri--g~i~~p-------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~ni 174 (314)
T COG2152 110 TYTAYSDK-GPRLALAVTKDF-----LNWERI--GAIFPP-------DNKDAALFPKKINGKYALLHRPVLGEYGMKGNI 174 (314)
T ss_pred EEEecCCC-Ccccchhhhhhh-----hhhhhc--ccccCC-------CCCCceEeeEEecCcEEEEEeecccccCccCce
Confidence 99998643 367789999985 789996 344432 346666632246799999976442 22 4679
Q ss_pred EEEEcCCCCCCeeccccc
Q 009698 169 LVYQTTDFKTYELLDEYL 186 (528)
Q Consensus 169 ~ly~S~DL~~W~~~~~l~ 186 (528)
++..|.||.+|.....+.
T Consensus 175 wia~S~dl~~w~~~~~~l 192 (314)
T COG2152 175 WIAFSPDLEHWGIHRKLL 192 (314)
T ss_pred EEEEcCCccCCCccceee
Confidence 999999999998764443
No 37
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=98.83 E-value=1e-07 Score=95.76 Aligned_cols=163 Identities=17% Similarity=0.114 Sum_probs=105.2
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCC-----------CCCCcEEEeeEEEccCCe
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-----------YDINGVWTGSATILPDGQ 88 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~-----------~d~~gv~sGs~v~~~~g~ 88 (528)
..+++++|+|+||.-..-. ...+..++|+||+||+.++.++..... .-..++|.+.++. .+|+
T Consensus 14 P~v~~~~~~yY~~~t~~~~-----~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~gk 87 (269)
T cd09001 14 PDVIRVGDDYYMVSTTMHY-----SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLRY-HNGT 87 (269)
T ss_pred CeEEEECCEEEEEECCccc-----CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceEE-ECCE
Confidence 6788899999999854211 124678899999999999876643221 1135699999874 6999
Q ss_pred EEEEeccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEE
Q 009698 89 IVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGIS 168 (528)
Q Consensus 89 ~~~~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i 168 (528)
++|+|+... ..+.+|+|++.. ..|+.. +++. ...||.|++ +++|+.||+++.. .+
T Consensus 88 yy~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~~---------~~iDp~~f~-D~dG~~Yl~~~~~-----~i 142 (269)
T cd09001 88 FYVFFCTNT----GGTYIYTADDPE----GPWTKT--ALDG---------GYHDPSLLF-DDDGTAYLVYGGG-----TI 142 (269)
T ss_pred EEEEEEecC----CCeEEEEcCCCC----CCCcCC--CcCC---------CcccCceEE-cCCCCEEEEeCCC-----cE
Confidence 999999862 346788887642 456543 1211 347999954 5789999998753 23
Q ss_pred EEEE-cCCCCCCeecc-cccccCC-CCCeeeEeeEEEeeecCccceeecC
Q 009698 169 LVYQ-TTDFKTYELLD-EYLHAVP-GTGMWECVDFYPVAINGSVGLDTSA 215 (528)
Q Consensus 169 ~ly~-S~DL~~W~~~~-~l~~~~~-~~g~wECPdlf~l~~~g~~~l~~~~ 215 (528)
.+.+ ++|+....-.. .+..... .....|-|.+++-+ |..+|++|.
T Consensus 143 ~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G~YYl~~S~ 190 (269)
T cd09001 143 RLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--GYYYIFNIA 190 (269)
T ss_pred EEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--CEEEEEEec
Confidence 3343 66766652211 2222111 12368999999865 555555554
No 38
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.80 E-value=3.4e-07 Score=92.82 Aligned_cols=176 Identities=14% Similarity=0.058 Sum_probs=107.2
Q ss_pred eeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceeccccc--CCCC-CCCCCcEEEeeEEEccCCeEEEEeccCC
Q 009698 21 GPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM--VPDQ-WYDINGVWTGSATILPDGQIVMLYTGST 97 (528)
Q Consensus 21 g~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al--~p~~-~~d~~gv~sGs~v~~~~g~~~~~YTg~~ 97 (528)
.++.++++|+||+-... .....++|+||+||+.....+ .+.. .+...++|.+.++. .+|+++|+|+...
T Consensus 4 ~v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyys~~~ 75 (288)
T cd08980 4 WVIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYFAAGD 75 (288)
T ss_pred eEEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEEEccC
Confidence 35678899999986431 457899999999999865332 2222 13456799999974 7999999999875
Q ss_pred C--CCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecC---CeeEEEEEE
Q 009698 98 D--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG---KTGISLVYQ 172 (528)
Q Consensus 98 ~--~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~---~~G~i~ly~ 172 (528)
. ...+.+++|.+++. |..+..|+.. .+++... + ..--||.++ . .+|++||+++.... ....+.+.+
T Consensus 76 ~~~~~~~~~~v~~a~~~-~~~~Gpw~~~--~~~~~~~-~---~~~iDp~~~-~-ddG~~Yl~~~~~~~~~~~~~~i~~~~ 146 (288)
T cd08980 76 GGGNANHRMYVLENAGA-DPPTGPWTFK--GRLADPT-D---RWAIDGTVF-E-HNGQLYFVWSGWEGRTNGNQNLYIAK 146 (288)
T ss_pred CCCCcceeEEEEEeCCC-CCCCCCceEe--eEeccCC-C---CeeeeeEEE-E-ECCEEEEEEEccCCCCCCCccEEEEE
Confidence 3 23456778888752 1123689874 3444221 1 234799994 4 35999999875421 223355556
Q ss_pred cCCCCCCeecccccccCC----C--CCeeeEeeEEEeeecCccceeecC
Q 009698 173 TTDFKTYELLDEYLHAVP----G--TGMWECVDFYPVAINGSVGLDTSA 215 (528)
Q Consensus 173 S~DL~~W~~~~~l~~~~~----~--~g~wECPdlf~l~~~g~~~l~~~~ 215 (528)
.++...+.-......... . ....|-|.+++.+ |..+|++|.
T Consensus 147 l~~~~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G~yYl~yS~ 193 (288)
T cd08980 147 MSNPWTLTGPRVLISRPEYDWERQGPGVNEGPAALKRN--GKVFLTYSA 193 (288)
T ss_pred CCCCCccCCcceEecCCCCCceecCceeeECcEEEEEC--CEEEEEEEC
Confidence 555434431111111111 1 1357999999996 444444443
No 39
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.71 E-value=3.7e-07 Score=91.72 Aligned_cols=173 Identities=17% Similarity=0.089 Sum_probs=104.5
Q ss_pred ceeEEE-CCEEEEEeeeCCCCC----CC-CCceEEEEEeCCcccceecccccCCCCC------------CCCCcEEEeeE
Q 009698 20 AGPLFY-KGWYHLFYQYNPDSA----VW-GNITWGHAVSADLIHWLYLPIAMVPDQW------------YDINGVWTGSA 81 (528)
Q Consensus 20 ng~~~~-~G~yHlfyq~~p~~~----~~-g~~~wgha~S~Dlv~W~~~p~al~p~~~------------~d~~gv~sGs~ 81 (528)
.-++.+ +|+|+|+.-....+. .+ .....-.++|+||+||+.++.++..... +...++|.+.+
T Consensus 5 P~v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~WAP~v 84 (269)
T cd08986 5 TYVTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVWAPEL 84 (269)
T ss_pred CeEEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcCCceE
Confidence 445665 679999986543221 00 1245779999999999999877754321 23567898888
Q ss_pred EEccCCeEEEEeccCCCC-CcceEEEEEEcCCCCCccceEEEcCCC-ceecCCCCCCCCCccCCeeEEEcCCCcEEEEEE
Q 009698 82 TILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGN-PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIG 159 (528)
Q Consensus 82 v~~~~g~~~~~YTg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~-Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g 159 (528)
.. .+|+++|+|+..... ....+++|++++.. ..|+..... |+ ..-.||.+| .+++|++||+.+
T Consensus 85 ~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~f-~D~DG~~Yl~~~ 149 (269)
T cd08986 85 HY-IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSLF-EDDDGKVYLVWH 149 (269)
T ss_pred EE-ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCceE-EcCCCCEEEEee
Confidence 64 789999999976432 23456778776542 467764322 11 134799995 567899999987
Q ss_pred eecCCeeEEEEEEcCCCCCCeecccccccCC----CCCeeeEeeEEEeeecCccceeecC
Q 009698 160 SKIGKTGISLVYQTTDFKTYELLDEYLHAVP----GTGMWECVDFYPVAINGSVGLDTSA 215 (528)
Q Consensus 160 ~~~~~~G~i~ly~S~DL~~W~~~~~l~~~~~----~~g~wECPdlf~l~~~g~~~l~~~~ 215 (528)
.. .+ .--+.|+....-......... .....|-|.+++.+ |..+|++|.
T Consensus 150 ~~-----~i-~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G~YYL~yS~ 201 (269)
T cd08986 150 NT-----LI-ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG--GKYYLFGTA 201 (269)
T ss_pred CC-----ce-EeccCccccccCCcEEEecccccccCCccccccEEEEEC--CEEEEEEee
Confidence 53 11 112455554332111111110 11247999999875 555555553
No 40
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=98.67 E-value=3.8e-07 Score=91.99 Aligned_cols=129 Identities=21% Similarity=0.169 Sum_probs=86.8
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecc--cccCCCCCCCCCcEEEeeEEEcc-CCeEEEEeccC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP--IAMVPDQWYDINGVWTGSATILP-DGQIVMLYTGS 96 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p--~al~p~~~~d~~gv~sGs~v~~~-~g~~~~~YTg~ 96 (528)
..++..+|+|||||..+... .......++|+|+|+++|++.+ +.+.+...++...+-...++.+. +|+++|+|.+.
T Consensus 65 gs~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~ 143 (280)
T cd08995 65 GSVIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATR 143 (280)
T ss_pred eEEEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEec
Confidence 34566899999999865422 1134679999999999999875 33432223433445567776543 59999999765
Q ss_pred CC----CCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEee
Q 009698 97 TD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 161 (528)
Q Consensus 97 ~~----~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~ 161 (528)
.. .....+.++.|+|. .+|+.. .+++.+..+ ..+--|.+ ++ .+|+|+|+++.+
T Consensus 144 ~~~~~~~~~g~i~~~~S~Dl-----~~W~~~--~~~~~~~~~---~~~E~P~l-~~-~~g~~~L~~s~~ 200 (280)
T cd08995 144 LLDGPYNRRGCIALFTSKDL-----KNWEYE--EPFYAPGLY---FMPECPDL-FK-MGDWWYLVYSEF 200 (280)
T ss_pred cCCCCCCCCeEEEEEEeCCc-----Ccceec--CceecCCCc---ceeecceE-EE-ECCEEEEEEEec
Confidence 42 22345677888884 899876 466543221 24678988 54 689999999875
No 41
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.67 E-value=9.4e-07 Score=89.29 Aligned_cols=117 Identities=17% Similarity=0.172 Sum_probs=83.5
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEeccCCCC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK 99 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~~~ 99 (528)
..+++++|+|+|+..... ....+...+|+||+||+.++.++.+. ..++|.+.++ ..+|+++|+|+.....
T Consensus 18 P~i~~~~~~yY~~~t~~~-----~~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~-~~~gkyy~yys~~~~~ 87 (280)
T cd09002 18 PSILRDGEDYYMTHSSFK-----YTPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLC-KYDGRYYIYFPAIPEG 87 (280)
T ss_pred CEEEEECCEEEEEEcchh-----cCCCEEEEECCCcCCceEccccccCC----CCCEEcCeeE-EECCEEEEEEEeecCC
Confidence 778889999999764211 12357889999999999988777542 3579999886 5899999999987543
Q ss_pred CcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEe
Q 009698 100 SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 160 (528)
Q Consensus 100 ~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~ 160 (528)
....+.+|++++.. ..|++ |+... ....-||.||+ +++|++||+.+.
T Consensus 88 ~~~~~~va~ad~p~----Gpw~~----~~~~~-----~~~~IDp~vf~-DddG~~Yl~~~~ 134 (280)
T cd09002 88 GNWTNMVIWADSPE----GPWSK----PIDLK-----IGGCIDPGHVV-DEDGNRYLFLSG 134 (280)
T ss_pred CCceEEEEEECCCC----CCCcC----CEecC-----CCCccCCceEE-cCCCCEEEEECC
Confidence 44567889887642 46754 22111 11236999965 588999999863
No 42
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.60 E-value=8.8e-07 Score=92.36 Aligned_cols=176 Identities=20% Similarity=0.185 Sum_probs=109.0
Q ss_pred ECCEEEEEeeeCCCC----CCCCCceEEEEEeCCcc----cceecccccCCCCCC-CCCcEEEeeEEEcc-CCeEEEEec
Q 009698 25 YKGWYHLFYQYNPDS----AVWGNITWGHAVSADLI----HWLYLPIAMVPDQWY-DINGVWTGSATILP-DGQIVMLYT 94 (528)
Q Consensus 25 ~~G~yHlfyq~~p~~----~~~g~~~wgha~S~Dlv----~W~~~p~al~p~~~~-d~~gv~sGs~v~~~-~g~~~~~YT 94 (528)
++|.--+|-...|.. ..|+.-|+++.-|++.. +|+..+.++...... ...--|||||++.. +|++.||||
T Consensus 72 ~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~dg~I~LfYT 151 (428)
T PF02435_consen 72 YNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNNDDGSIQLFYT 151 (428)
T ss_dssp BTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTTTSEEEEEEE
T ss_pred ECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCCCCeEEEEEe
Confidence 578555666665543 34678899999999998 999999776554431 22447999999876 899999999
Q ss_pred cCCC--CC--cce-----EEEEEEcCCCCCccceEEEcCCCceecCCCC-C------CCCCccCCeeEEEc-CCCcEEEE
Q 009698 95 GSTD--KS--VQV-----QNLAYPADPSDPLLLDWVKYPGNPVLVPPRH-I------GPKDFRDPTTAWAG-PDGKWRLT 157 (528)
Q Consensus 95 g~~~--~~--~~~-----q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~-~------~~~~~RDP~V~~~~-~~g~~~m~ 157 (528)
.... .. .|+ .+++..++.+ ..+..|+++ ..++.+... | ....||||++ |.+ .+|+-||+
T Consensus 152 av~~~~~~~~~Q~l~t~~~g~~~~d~~~-v~i~g~~~~--~~lfe~DG~~Yqt~~Q~~~~afRDP~~-f~DP~~G~~YLv 227 (428)
T PF02435_consen 152 AVGFSDTPTFRQRLATATLGLIHADDDG-VWITGFSNH--HELFEGDGKHYQTYEQNPGYAFRDPHV-FEDPEDGKRYLV 227 (428)
T ss_dssp EEEEETTTTTEEEEEEEEEEEEEECSTE-EEEEEEEEE--EEEES--SSSB--HHHHHH---EEEEE-EEETTTTEEEEE
T ss_pred ecccCCCcchhhhhhhHhcCeeecCCCc-eeEccccce--eEeeccchhhhhChhhcCCccccCCee-EECCCCCcEEEE
Confidence 8543 11 122 2233333321 112345544 455553211 1 1357999999 454 68999998
Q ss_pred EEeec---C------------------------------CeeEEEEEEcCC--CCCCeecccccccCCCCCeeeEeeEEE
Q 009698 158 IGSKI---G------------------------------KTGISLVYQTTD--FKTYELLDEYLHAVPGTGMWECVDFYP 202 (528)
Q Consensus 158 ~g~~~---~------------------------------~~G~i~ly~S~D--L~~W~~~~~l~~~~~~~g~wECPdlf~ 202 (528)
.-+.. + ..|+|.|.+.+| +..|+...+|+.+..-....|=|+++.
T Consensus 228 FEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~de~ERP~iv~ 307 (428)
T PF02435_consen 228 FEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVNDELERPHIVF 307 (428)
T ss_dssp EEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTBS-EEEEEEEE
T ss_pred EecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceecccccccccCCcEEE
Confidence 85421 0 257788887654 568999999987643334899999999
Q ss_pred ee
Q 009698 203 VA 204 (528)
Q Consensus 203 l~ 204 (528)
++
T Consensus 308 ~~ 309 (428)
T PF02435_consen 308 MN 309 (428)
T ss_dssp ET
T ss_pred EC
Confidence 97
No 43
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.51 E-value=7.1e-06 Score=83.54 Aligned_cols=157 Identities=22% Similarity=0.258 Sum_probs=92.5
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEeccCCCC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK 99 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~~~ 99 (528)
..++.++|+|+||--.. + ++.+|+||++|+..+.++. ..++|.+++. ..+|++|++|+..
T Consensus 6 P~i~~~~g~YY~~~T~~------~----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~-~~~g~~Y~~~~~~--- 65 (295)
T cd08982 6 PVVILFKGEYYLFASMS------G----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVF-VYDGTLYYTASTY--- 65 (295)
T ss_pred CeEEEECCEEEEEEeCC------C----CeEECCCcCCceECCcccC------CCCcCcCEEE-EECCEEEEEEeCC---
Confidence 35678899999886541 1 3689999999999987663 4578999986 4789877766542
Q ss_pred CcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeE------------
Q 009698 100 SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI------------ 167 (528)
Q Consensus 100 ~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~------------ 167 (528)
.+.+|+|++.. .-.|+.. .+. ......||.||+ +++|++||++|... ..+.
T Consensus 66 ---~~~v~~s~~p~---gp~w~~~--~~~-------~~~~~IDp~vf~-DdDGk~Yl~~g~~~-~~~i~~~eL~~d~~~~ 128 (295)
T cd08982 66 ---NSRIYKTADPL---SGPWEEV--DKS-------FPPGLADPALFI-DDDGRLYLYYGCSN-NYPLRGVEVDPDTFRP 128 (295)
T ss_pred ---CceEEEeCCCC---CCCcccc--ccc-------cCCCccCCceEE-CCCCCEEEEEecCC-CCCeEEEEECcccCCc
Confidence 23577776642 1135432 010 112457999954 57899999987531 1111
Q ss_pred ----EEEE-EcCCCCCCeecccccccCCCCCeeeEeeEEEeeecCccceeecC
Q 009698 168 ----SLVY-QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSA 215 (528)
Q Consensus 168 ----i~ly-~S~DL~~W~~~~~l~~~~~~~g~wECPdlf~l~~~g~~~l~~~~ 215 (528)
..++ .+..-..|+..+.........+..|-|.+++.+ |+.+|++|.
T Consensus 129 ~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~--G~YYL~yS~ 179 (295)
T cd08982 129 IGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHN--GKYYLQYAA 179 (295)
T ss_pred cCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEEC--CEEEEEEeC
Confidence 1111 222234465543321111112357889988864 555555554
No 44
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.48 E-value=5e-07 Score=92.53 Aligned_cols=107 Identities=21% Similarity=0.301 Sum_probs=80.8
Q ss_pred CCCcEEEeeEEEccCCe--EEEEeccCCCCCcc-eEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEE
Q 009698 72 DINGVWTGSATILPDGQ--IVMLYTGSTDKSVQ-VQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWA 148 (528)
Q Consensus 72 d~~gv~sGs~v~~~~g~--~~~~YTg~~~~~~~-~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~ 148 (528)
....||-..|++. +|. ++|+|.+....... .+++|.|.|+ ++|++. .+||+.+...++....-||.|+.
T Consensus 28 ~~~~vfNpgai~~-~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~- 99 (312)
T PF04041_consen 28 EPNAVFNPGAIVF-DGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTK- 99 (312)
T ss_dssp TSSEEEEEEEEEE-TTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEE-
T ss_pred CcceEEcCcEEEE-CCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEE-
Confidence 3467999999864 555 88988876544334 8999999996 899986 58999875555666789999963
Q ss_pred cCCCcEEEEEEeecCCeeEEEEEEcCCCCCCeecccccc
Q 009698 149 GPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 187 (528)
Q Consensus 149 ~~~g~~~m~~g~~~~~~G~i~ly~S~DL~~W~~~~~l~~ 187 (528)
.+++|||++.+......++.+.+|+|+.+|+..+..+.
T Consensus 100 -i~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~~~ 137 (312)
T PF04041_consen 100 -IDDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKIFP 137 (312)
T ss_dssp -ETTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECTTT
T ss_pred -ECCEEEEEEEEecCCCcccceEEccchHhhEEeccccC
Confidence 57899999998765556788999999999999987654
No 45
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.48 E-value=2.9e-06 Score=85.65 Aligned_cols=151 Identities=16% Similarity=0.129 Sum_probs=95.7
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcc-cceecccc-cC-CCCCCCCCcEEEeeEEEccCCeEEEEeccC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIA-MV-PDQWYDINGVWTGSATILPDGQIVMLYTGS 96 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv-~W~~~p~a-l~-p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~ 96 (528)
..+++++|+|||||..+..+ ......|+|+|+|.. .|++.+.. +. +.. .......+++++++|+++|+|.+.
T Consensus 65 P~v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~~---~~~~~Dp~v~~d~dG~~Yl~~~~~ 139 (287)
T cd08999 65 PDVSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCPEG---EGGAIDPSFFTDTDGKRYLVWKSD 139 (287)
T ss_pred ceEEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecCCC---CCCccCCCeEECCCCCEEEEEecc
Confidence 45788999999999876543 235679999999965 89887533 22 222 234677888876689999999764
Q ss_pred CCC--CcceEEEE-EEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeec--CC--eeEEE
Q 009698 97 TDK--SVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--GK--TGISL 169 (528)
Q Consensus 97 ~~~--~~~~q~lA-~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~--~~--~G~i~ 169 (528)
... ..+.+.++ .|.|+ .+|.... ..++.+........+--|.+ ++ .+|+|||++.+.. .. .-++.
T Consensus 140 ~~~~~~~~~i~~~~ls~d~-----~~~~~~~-~~i~~~~~~~~~~~~EgP~i-~k-~~g~yyl~~S~~~~~~~~~~y~i~ 211 (287)
T cd08999 140 GNSIGKPTPIYLQELSADG-----LTLTGEP-VRLLRNDEDWEGPLVEAPYL-VK-RGGYYYLFYSAGGCCSGASTYAVG 211 (287)
T ss_pred CCCCCCCceEEEEEeCCCC-----ccccCCc-EeeecccccccCCceEeeEE-EE-ECCEEEEEEEcCCccCCCCCEEEE
Confidence 321 11224444 44453 5665321 23333222222335677999 55 6899999997642 11 22567
Q ss_pred EEEcCCCC-CCeecc
Q 009698 170 VYQTTDFK-TYELLD 183 (528)
Q Consensus 170 ly~S~DL~-~W~~~~ 183 (528)
+++|+++. .|+...
T Consensus 212 ~~~s~~~~Gpw~~~~ 226 (287)
T cd08999 212 VARSKSLLGPYVKAP 226 (287)
T ss_pred EEEeCCCcCCcCCCC
Confidence 78999976 787654
No 46
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=98.47 E-value=3.7e-06 Score=83.66 Aligned_cols=150 Identities=17% Similarity=0.143 Sum_probs=94.2
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEeccCCCC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK 99 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~~~ 99 (528)
.-+++++|+|||||.....+ ....+.+.|+|+|+.+|....... +... ....+..++++.+++|+++|+|.+....
T Consensus 62 P~v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~-~~~~-~~~~~iDp~vf~d~dg~~yl~~~~~~~~ 137 (271)
T cd08978 62 PEVIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIR-PPTS-NNGNSIDPTVFKDDDGKYYLYYGSGDPG 137 (271)
T ss_pred CeEEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccC-cCcc-CCCCccCcceEEcCCCCEEEEEecccCC
Confidence 67888999999999987542 234679999999999987653211 1111 2345778999887669999999876421
Q ss_pred -CcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeec--CCeeEEEEEEcCCC
Q 009698 100 -SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--GKTGISLVYQTTDF 176 (528)
Q Consensus 100 -~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~--~~~G~i~ly~S~DL 176 (528)
....+.++.+.+. ..+.. ..+++..........+..|.+ ++ .+|+|||++.+.. ...-.+.+++|+++
T Consensus 138 ~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~~~~~s~~~ 208 (271)
T cd08978 138 AGFGGIYISELTDD-----LTKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNIGYATSDSI 208 (271)
T ss_pred CCCCcEEEEEECcc-----ccccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceEEEEECCCC
Confidence 1234566766653 22222 233321111111234678999 55 6799999987652 22335777888876
Q ss_pred C-CCeec
Q 009698 177 K-TYELL 182 (528)
Q Consensus 177 ~-~W~~~ 182 (528)
. -|+..
T Consensus 209 ~Gp~~~~ 215 (271)
T cd08978 209 DGPYVKK 215 (271)
T ss_pred CCCcCcC
Confidence 4 45554
No 47
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.45 E-value=5e-07 Score=91.07 Aligned_cols=88 Identities=23% Similarity=0.323 Sum_probs=60.2
Q ss_pred CCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeec-----CCeeEEEEEEcCCCCCCeecccccccCCCCC-eeeE
Q 009698 124 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTGISLVYQTTDFKTYELLDEYLHAVPGTG-MWEC 197 (528)
Q Consensus 124 ~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~-----~~~G~i~ly~S~DL~~W~~~~~l~~~~~~~g-~wEC 197 (528)
.++|||.+..+ ...+|||+|++..++|+|||+..... .....|.+|+|+||++|+..+.+....+..+ +| |
T Consensus 4 ~~~pvl~~~~g--~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-A 80 (276)
T cd08983 4 NGNPVLTSTAG--TKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-A 80 (276)
T ss_pred CCceEEeCCcC--CCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-C
Confidence 35899986433 47899999965335889999976531 1223588999999999999887643222334 67 9
Q ss_pred eeEEEeeecCccceeec
Q 009698 198 VDFYPVAINGSVGLDTS 214 (528)
Q Consensus 198 Pdlf~l~~~g~~~l~~~ 214 (528)
|++|..+..|...+.++
T Consensus 81 Pev~~d~~~g~y~~~~s 97 (276)
T cd08983 81 PEAFWDAERGQYVVYWS 97 (276)
T ss_pred ccceEcCCCCeEEEEEe
Confidence 99998864444433333
No 48
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=98.40 E-value=5.8e-06 Score=83.13 Aligned_cols=146 Identities=14% Similarity=0.044 Sum_probs=91.6
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcc-cceecccc-cCCCCCCCCCcEEEeeEEEccCCeEEEEeccCC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIA-MVPDQWYDINGVWTGSATILPDGQIVMLYTGST 97 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv-~W~~~p~a-l~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~ 97 (528)
..+++++|+|||||..... .+....|+|+|+|.. .|++.... +.+ ...+......++++++.||+++|+|.+.
T Consensus 67 P~i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~yl~~~~~- 141 (274)
T cd08990 67 PDVVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAYLYWGGG- 141 (274)
T ss_pred CeEEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEEEEECCc-
Confidence 5678899999999987643 235679999999976 79987633 322 2223345668888877789999999864
Q ss_pred CCCcceEEEEE-EcCCCCCccceEEEcCCCceecCCC---CCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEEEEc
Q 009698 98 DKSVQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQT 173 (528)
Q Consensus 98 ~~~~~~q~lA~-s~D~~d~~l~~w~k~~~~Pvi~~~~---~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~ly~S 173 (528)
+.+.+|. +.|. .+|+.. ..+|..+. ......+-=|.| ++ .+|+|||++.+.. ...+.+.+|
T Consensus 142 ----~~~~~~~l~~d~-----~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~~~~~a~s 206 (274)
T cd08990 142 ----LGLRVAKLKPDM-----LSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PEEIAYATS 206 (274)
T ss_pred ----CCEEEEEeCccc-----cccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--CcEEEEEEc
Confidence 2334443 3342 566532 22332110 111122456888 55 7899999988642 345666678
Q ss_pred CCCC-CCeecccc
Q 009698 174 TDFK-TYELLDEY 185 (528)
Q Consensus 174 ~DL~-~W~~~~~l 185 (528)
+++. -|+..+.+
T Consensus 207 ~~p~GP~~~~g~~ 219 (274)
T cd08990 207 DSPLGPFTYRGVI 219 (274)
T ss_pred CCCCCCcccCcEE
Confidence 7764 46655544
No 49
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=98.38 E-value=8.3e-06 Score=81.59 Aligned_cols=151 Identities=17% Similarity=0.155 Sum_probs=97.1
Q ss_pred ceeEEEC-CEEEEEeeeCCCCCCCCCceEEEEEeCCccc-ceecc--cccCCCC--CCCCCcEEEeeEEEccCCeEEEEe
Q 009698 20 AGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIH-WLYLP--IAMVPDQ--WYDINGVWTGSATILPDGQIVMLY 93 (528)
Q Consensus 20 ng~~~~~-G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~-W~~~p--~al~p~~--~~d~~gv~sGs~v~~~~g~~~~~Y 93 (528)
..+++++ |+|+|||..... ..+....+.|+|+|+.. |+... +.+ +.. ..+...+..++++.+++|+++|+|
T Consensus 63 p~v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dp~v~~d~dG~~y~~~ 139 (286)
T cd08772 63 PSIVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVL-PDNPPAADVSNFRDPFVFEDDDGKWYLVF 139 (286)
T ss_pred ceEEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccc-cCCCCccccccccCCeEEEcCCCCEEEEE
Confidence 4566777 999999987543 22456899999999975 56442 222 221 223345788999876569999999
Q ss_pred ccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeec----CCeeEEE
Q 009698 94 TGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI----GKTGISL 169 (528)
Q Consensus 94 Tg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~----~~~G~i~ 169 (528)
.+........+.+|.|+|. .+|++.+..+++.... ....+.-|.+ ++ .+|+|||++.+.. ...-++.
T Consensus 140 ~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~-~~-~~g~~yL~~s~~~~~~~~~~y~~~ 210 (286)
T cd08772 140 GSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGL-LK-KNGKYYLFYSINGTGRVDSTYSIG 210 (286)
T ss_pred ccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEE-EE-ECCEEEEEEEcCCCcCCCCCcceE
Confidence 8765333456789999885 6887753222222211 2245678999 44 6799999998652 2223466
Q ss_pred EEEcCC-CCCCeec
Q 009698 170 VYQTTD-FKTYELL 182 (528)
Q Consensus 170 ly~S~D-L~~W~~~ 182 (528)
.++|++ +-.|+..
T Consensus 211 ~~~~~~~~g~~~~~ 224 (286)
T cd08772 211 YARSESDTGPYVPK 224 (286)
T ss_pred EEEccCCCCCcccC
Confidence 667765 4455543
No 50
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=98.36 E-value=2.1e-05 Score=78.19 Aligned_cols=188 Identities=14% Similarity=0.215 Sum_probs=114.4
Q ss_pred ecc-cCc-cc---ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccC----CCCCCCCCcEEEeeEE
Q 009698 12 LCD-ENS-MI---AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSAT 82 (528)
Q Consensus 12 ~~p-~gw-~N---ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~----p~~~~d~~gv~sGs~v 82 (528)
+.| .|| +. .-+++++|+||||--.... ..|+-+-+. |+||+.++.|+. +.. ...+.|.+.++
T Consensus 14 ~~pk~~~~~~lkDPtiv~~nGkYyvYgT~~~~------~~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~~~fwAPqVf 84 (303)
T cd08987 14 ISPKSDWIVAIKDPTVVYYNGRYHVYATTADA------GNYGSMYFN-FTDWSQAASATQYYLQNGN--MTGYRVAPQVF 84 (303)
T ss_pred ccCCCCCeeeecCCeEEEECCEEEEEEccCCC------CCceeeeec-ccCHhHhccchhhcccCCC--CCcccccCEEe
Confidence 568 899 55 6778899999999765331 224333333 999999886652 222 23457788775
Q ss_pred E-ccCCeEEEEeccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEee
Q 009698 83 I-LPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 161 (528)
Q Consensus 83 ~-~~~g~~~~~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~ 161 (528)
. .+++++||+|+- . ..++|+|+|..++. .|... .|++...........-|+.|+ . ++++.||+....
T Consensus 85 yf~pk~kwYL~Yq~-~-----~~~yaTs~dp~~P~--~ws~~--qpl~~~~~~~~~~~~ID~~vI-~-Dd~~~YLff~~d 152 (303)
T cd08987 85 YFAPQNKWYLIYQW-W-----PAAYSTNSDISNPN--GWSAP--QPLFSGTPNGSPGGWIDFWVI-C-DDTNCYLFFSDD 152 (303)
T ss_pred eeccCCEEEEEEec-C-----ceEEEeCCCCCCCC--ccCCC--cccccCcccCCCCCccceeEE-e-CCCCEEEEEecC
Confidence 2 468999999995 1 24688888876553 57653 677653222223456899995 3 688888887532
Q ss_pred cCCeeEEEEEEcC-CCCCC-----eecccccccCCCCCeeeEeeEEEeeecCccceeecCCCCCeEEEEeeecCCCcceE
Q 009698 162 IGKTGISLVYQTT-DFKTY-----ELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDH 235 (528)
Q Consensus 162 ~~~~G~i~ly~S~-DL~~W-----~~~~~l~~~~~~~g~wECPdlf~l~~~g~~~l~~~~~g~~~~~vl~~s~~~~~~~~ 235 (528)
.| .||+|+ .+.+. +.. .+..........|-|++++++.. .+++|.++..+..+..
T Consensus 153 ---nG--~iyra~~~~~nFp~~~~~~~-~~~~~~~~~~lfEa~~Vykv~G~-------------~~YlmiveA~g~~~~r 213 (303)
T cd08987 153 ---NG--KLYRSSTTLGNFPNGGTETV-IIMSDSNKNNLFEASNVYKVKGQ-------------NQYLLIVEAIGSDGGR 213 (303)
T ss_pred ---CC--eEEEEecchhhCCCCCCccE-EEecCCCccccceeeEEEEECCC-------------eEEEEEEEecCCCCCC
Confidence 34 368764 22222 111 11111112247999999999722 2555666554443334
Q ss_pred EEEE
Q 009698 236 YAIG 239 (528)
Q Consensus 236 Y~vG 239 (528)
|+++
T Consensus 214 Yfrs 217 (303)
T cd08987 214 YFRS 217 (303)
T ss_pred eEEE
Confidence 6666
No 51
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.30 E-value=1.8e-05 Score=80.28 Aligned_cols=150 Identities=15% Similarity=0.147 Sum_probs=90.4
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcc-cceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEeccCCC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTD 98 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv-~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~~ 98 (528)
..+++++|+|||||...... ......++|+|+|.. .|+..+..+.+.. .....++++.+.||+++|+|+....
T Consensus 58 P~v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~~~~~~~ 131 (294)
T cd08991 58 PEVYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLYYSRNNY 131 (294)
T ss_pred cEEEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEEEEecCC
Confidence 57888999999999876432 235688999999987 7887664333322 2356788887777999999986543
Q ss_pred CC--cceEEEEEEcCCCCCccceEEEcCC---CceecC-------C-C---CCCCCCccCCeeEEEcCCCcEEEEEEeec
Q 009698 99 KS--VQVQNLAYPADPSDPLLLDWVKYPG---NPVLVP-------P-R---HIGPKDFRDPTTAWAGPDGKWRLTIGSKI 162 (528)
Q Consensus 99 ~~--~~~q~lA~s~D~~d~~l~~w~k~~~---~Pvi~~-------~-~---~~~~~~~RDP~V~~~~~~g~~~m~~g~~~ 162 (528)
.. ......+.+.|. .+|..... .|+..+ + . ..+....--|.+ ++ .+|+|||++.+..
T Consensus 132 ~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~ 204 (294)
T cd08991 132 GNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTV-LK-HNGRYYLTYSANH 204 (294)
T ss_pred CCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEE-EE-ECCEEEEEEECCC
Confidence 21 123344556553 45532111 122111 0 0 011123457888 44 6899999987542
Q ss_pred --CCeeEEEEEEcCC-CCCCeec
Q 009698 163 --GKTGISLVYQTTD-FKTYELL 182 (528)
Q Consensus 163 --~~~G~i~ly~S~D-L~~W~~~ 182 (528)
...-.+.+.+|++ +-.|+..
T Consensus 205 ~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 205 YENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred CCCCCceEEEEEcCCCCCCcEec
Confidence 1111466678876 4667764
No 52
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=98.30 E-value=6.9e-06 Score=83.53 Aligned_cols=129 Identities=19% Similarity=0.128 Sum_probs=87.2
Q ss_pred eEEEC-CEEEEEeeeCCCCCCCCCceEEEEEeC-Ccccceecccc-cCCCCCCCCCcEEEeeEEEccCCeEEEEeccCCC
Q 009698 22 PLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSA-DLIHWLYLPIA-MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTD 98 (528)
Q Consensus 22 ~~~~~-G~yHlfyq~~p~~~~~g~~~wgha~S~-Dlv~W~~~p~a-l~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~~ 98 (528)
++..+ |+|+|||..+......+....++|+|+ |+++|++.+.. +.+....+..+.-...++. .+|+++|+|++...
T Consensus 68 av~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~-~~g~~~m~~g~~~~ 146 (298)
T cd08996 68 AVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVIPPPDGYTTHFRDPKVFW-HDGKWYMVLGAGTE 146 (298)
T ss_pred EEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCceEcCCCCCCCcccCCeEEe-ECCEEEEEEEEEec
Confidence 34456 999999986543211245678999999 89999987522 2211223345567888865 57999999998765
Q ss_pred CCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCC--CcEEEEEEee
Q 009698 99 KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPD--GKWRLTIGSK 161 (528)
Q Consensus 99 ~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~--g~~~m~~g~~ 161 (528)
+....+.++.|+|+ .+|++. .++...... ....+--|.+ ++ .+ ++|+|+++..
T Consensus 147 ~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~~~-~~~~~EcP~l-~~-l~~~~k~vL~~s~~ 201 (298)
T cd08996 147 DGTGRILLYRSDDL-----KNWEYL--GELLTSLGD-FGYMWECPDL-FP-LDVEGKWVLIFSPQ 201 (298)
T ss_pred CCCcEEEEEECCCC-----CCCEEc--ceecccCCC-ccceEeCCcE-EE-ECCCCeEEEEECCC
Confidence 44456788999885 899886 344322111 2246789999 44 56 9999999865
No 53
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.14 E-value=2.5e-05 Score=78.49 Aligned_cols=73 Identities=19% Similarity=0.157 Sum_probs=49.9
Q ss_pred ccCCeeEEEcCCCcEEEEEEeecC---------CeeEEEEEEcCCCCCCeecccccccCC--------------CCCeee
Q 009698 140 FRDPTTAWAGPDGKWRLTIGSKIG---------KTGISLVYQTTDFKTYELLDEYLHAVP--------------GTGMWE 196 (528)
Q Consensus 140 ~RDP~V~~~~~~g~~~m~~g~~~~---------~~G~i~ly~S~DL~~W~~~~~l~~~~~--------------~~g~wE 196 (528)
+|||+|+ +..+|.|||+..+... ..+.+.+|+|+||++|+..+.++...+ ..+..+
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999995 4457789998765421 124588999999999999887764211 122345
Q ss_pred EeeEEEeeecCccceeecC
Q 009698 197 CVDFYPVAINGSVGLDTSA 215 (528)
Q Consensus 197 CPdlf~l~~~g~~~l~~~~ 215 (528)
||+++.++ |+.++.+|+
T Consensus 81 AP~v~~~~--g~yyl~~s~ 97 (269)
T cd08986 81 APELHYIK--GRWYLVACM 97 (269)
T ss_pred CceEEEEC--CEEEEEEEc
Confidence 99999986 544444443
No 54
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.13 E-value=6.3e-05 Score=76.17 Aligned_cols=146 Identities=16% Similarity=0.115 Sum_probs=89.0
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCc--ccceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEeccCC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL--IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 97 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dl--v~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~ 97 (528)
.-+++.+|+|||||..+..+. .....++|+|+|+ -.|+..++++.+...........++++++++|+++|+|....
T Consensus 61 P~v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Yl~~~~~~ 138 (288)
T cd08998 61 PDVIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLWLSFGSFW 138 (288)
T ss_pred CeEEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEEEEeeecc
Confidence 457788999999998764331 3467899999999 799988766655432223356788888777899999997542
Q ss_pred CCCcceEEEEEEc-CCCCCccceEEEcCCCc--eecCCCCCCCCCccCCeeEEEcCCCcEEEEEEee-cC---Cee-EEE
Q 009698 98 DKSVQVQNLAYPA-DPSDPLLLDWVKYPGNP--VLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK-IG---KTG-ISL 169 (528)
Q Consensus 98 ~~~~~~q~lA~s~-D~~d~~l~~w~k~~~~P--vi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~-~~---~~G-~i~ 169 (528)
. .+.++..+ |.+.+ ..+.. .+ ++..+.. ....-.|++ ++ .+|+|||++.+. .. ..+ ++.
T Consensus 139 ~----~i~~~~l~~~~~~~--~~~~~---~~~~i~~~~~~--~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~~~y~v~ 205 (288)
T cd08998 139 G----GIFLVELDPKTGKP--LYPGG---YGYNIAGRPRG--HGAIEAPYI-IY-RGGYYYLFVSYGGCCAGEDSTYNIR 205 (288)
T ss_pred C----CEEEEEeCcccCCc--cCCCC---cceEEeccCCC--CCceeeeEE-EE-eCCEEEEEEEcchhcCCCCCceEEE
Confidence 1 23344332 21111 12210 12 2222111 123568999 55 789999998653 11 112 577
Q ss_pred EEEcCCCC-CCe
Q 009698 170 VYQTTDFK-TYE 180 (528)
Q Consensus 170 ly~S~DL~-~W~ 180 (528)
+++|+++. -|+
T Consensus 206 ~~~s~~~~GP~~ 217 (288)
T cd08998 206 VGRSKSITGPYV 217 (288)
T ss_pred EEEcCCCCCCcC
Confidence 88998753 354
No 55
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=98.06 E-value=1.5e-05 Score=79.13 Aligned_cols=117 Identities=16% Similarity=0.219 Sum_probs=88.2
Q ss_pred cccCCCC--CCCCC----cEEEeeEEEccCCeEEEEeccCC-----CCCcceEEEEEEcCCCCCccce-EEEcCCCceec
Q 009698 63 IAMVPDQ--WYDIN----GVWTGSATILPDGQIVMLYTGST-----DKSVQVQNLAYPADPSDPLLLD-WVKYPGNPVLV 130 (528)
Q Consensus 63 ~al~p~~--~~d~~----gv~sGs~v~~~~g~~~~~YTg~~-----~~~~~~q~lA~s~D~~d~~l~~-w~k~~~~Pvi~ 130 (528)
+.|.|.. .+++. .+|.++++. .++++.|+|-... ........+|.|+|+ .+ |++. .+|++.
T Consensus 12 pIi~~~~~~~~~~~~~~~~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e-~ep~~~ 84 (314)
T COG2152 12 PIITRSDYIPPHARFIVVSVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIE-PEPTLW 84 (314)
T ss_pred CceeeccccCCCCceeEEEEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecC-CcceEe
Confidence 4455544 34555 789999875 6899999988722 224567889999996 56 9886 489887
Q ss_pred C-CCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEEEEcCCCCCCeeccccccc
Q 009698 131 P-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHA 188 (528)
Q Consensus 131 ~-~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~ly~S~DL~~W~~~~~l~~~ 188 (528)
| ...++....-||.|+ + .+++|+|.+.+..+.+.+..+.-++|+.+|++.+.++.+
T Consensus 85 P~~~~~e~~G~EDPRvt-~-I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~~p 141 (314)
T COG2152 85 PANYPYEIYGIEDPRVT-K-IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIFPP 141 (314)
T ss_pred cCCCchhhhcccCceEE-E-ECCEEEEEEEecCCCCcccchhhhhhhhhhhhcccccCC
Confidence 6 334456678999994 4 789999999997665556778899999999999988654
No 56
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=98.00 E-value=6.3e-05 Score=81.09 Aligned_cols=131 Identities=15% Similarity=0.080 Sum_probs=83.6
Q ss_pred eeEEECCEEEEEeeeCCCCCCCC-CceEEEEEeCCcccceecc-cccCCCCCCCCCcEEEeeEEEccCCeEEEEeccCCC
Q 009698 21 GPLFYKGWYHLFYQYNPDSAVWG-NITWGHAVSADLIHWLYLP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTD 98 (528)
Q Consensus 21 g~~~~~G~yHlfyq~~p~~~~~g-~~~wgha~S~Dlv~W~~~p-~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~~ 98 (528)
..+..+|++||||..+.....+. ...-++|+|+|+.+|+..+ ++|.+.......+.-.+.++ ..+|+++|++.+...
T Consensus 90 sav~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~~~fRDP~V~-~~~g~~~M~~g~~~~ 168 (445)
T TIGR01322 90 SAVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYTAHFRDPKVW-KHNGHWYMVIGAQTE 168 (445)
T ss_pred eEEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCcCcCCCCcEE-eECCEEEEEEEEecC
Confidence 34457999999998764322221 2335799999999999876 56655332112234456665 468999999877543
Q ss_pred CCcceEEEEEEcCCCCCccceEEEcCCCceecCCC---CCCCCCccCCeeEEEcCCCcEEEEEEee
Q 009698 99 KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSK 161 (528)
Q Consensus 99 ~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~---~~~~~~~RDP~V~~~~~~g~~~m~~g~~ 161 (528)
.......+..|+|. .+|+.. .++..+.. +.....+--|-+ ++ -+++|+|+++..
T Consensus 169 ~~~g~i~ly~S~Dl-----~~W~~~--g~~~~~~~~~~~~~g~~~ECPdl-f~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 169 TEKGSILLYRSKDL-----KNWTFV--GEILGDGQNGLDDRGYMWECPDL-FS-LDGQDVLLFSPQ 225 (445)
T ss_pred CCceEEEEEECCCc-----ccCeEe--cccccccccccCCccceEECCeE-EE-ECCcEEEEEecc
Confidence 33234567778774 899986 45554320 111235778988 54 678999998754
No 57
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=97.98 E-value=6.6e-05 Score=75.56 Aligned_cols=147 Identities=13% Similarity=0.055 Sum_probs=90.2
Q ss_pred eeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcc-cceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEeccCCCC
Q 009698 21 GPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK 99 (528)
Q Consensus 21 g~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv-~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~~~ 99 (528)
.+++++|+|||||..... -.....+.|+|++.. .|+..+..+.+ ...+..++++++++|+.+|+|.+....
T Consensus 71 ~i~~~~g~yy~y~~~~~~---~~~~~~~va~a~~~~Gp~~~~~~~~~~-----~~~~iD~~vf~d~dG~~Yl~~~~~~~~ 142 (286)
T PF04616_consen 71 EIHYINGKYYMYYSDSGG---DAGSGIGVATADSPDGPWTDPGKIPIP-----GGNSIDPSVFVDDDGKYYLYYGSWDNG 142 (286)
T ss_dssp EEEEETTEEEEEEEEEST---STTEEEEEEEESSTTS-EEEEEEEEEE-----SSSSSSEEEEEETTSEEEEEEEESTTT
T ss_pred eEEEcCCeEEEEEEccCC---CCCcceeEEEeCCcccccccccceeec-----cccccCceEEEecCCCcEEeCcccCCC
Confidence 467789999999992211 124568999999986 89987644333 223567888887779999999886542
Q ss_pred -CcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeec-CCeeEEEEEEcCCCC
Q 009698 100 -SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTTDFK 177 (528)
Q Consensus 100 -~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~-~~~G~i~ly~S~DL~ 177 (528)
..+.+.+|...+.. .++...+...+..........-.--|++ ++ .+|+|||++.+.. ...-++.+++|+++.
T Consensus 143 ~~~~~i~~~~l~~d~----~~~~~~~~~~~~~~~~~~~~~~~Egp~~-~k-~~g~yYl~~s~~~~~~~y~v~~~~s~~~~ 216 (286)
T PF04616_consen 143 DPGGGIYIAELDPDG----TSLTGEPVVVIFPGDEGWDGGVVEGPFV-FK-HGGKYYLFYSAGGTGSPYQVGYARSDSPL 216 (286)
T ss_dssp SSEEEEEEEEEETTT----SSEEEEECEEEEEESGSSTTTBEEEEEE-EE-ETTEEEEEEEESGSSTTTEEEEEEESSTT
T ss_pred ccceeEEeecccCcc----ccccCcccccccccccccCCccccceEE-EE-cCCCEEEEEeccCCCCCceEEEeeccCCC
Confidence 23445555544321 4454432122332221112234456888 55 7899999988652 222356778999976
Q ss_pred C-Cee
Q 009698 178 T-YEL 181 (528)
Q Consensus 178 ~-W~~ 181 (528)
. |+.
T Consensus 217 gp~~~ 221 (286)
T PF04616_consen 217 GPWEW 221 (286)
T ss_dssp SGGEE
T ss_pred Cceee
Confidence 5 443
No 58
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=97.92 E-value=0.00021 Score=73.95 Aligned_cols=143 Identities=16% Similarity=0.135 Sum_probs=89.1
Q ss_pred CCEEEEEeeeCCCCC---CCCCceEEEEEeCCccc----ceecccccCCCCCC-C-------------CCcEEEeeEEEc
Q 009698 26 KGWYHLFYQYNPDSA---VWGNITWGHAVSADLIH----WLYLPIAMVPDQWY-D-------------INGVWTGSATIL 84 (528)
Q Consensus 26 ~G~yHlfyq~~p~~~---~~g~~~wgha~S~Dlv~----W~~~p~al~p~~~~-d-------------~~gv~sGs~v~~ 84 (528)
+|+|||||-.+-... ..-.+..++|+++|+.. |+.+.+.+.++..+ . ....-.+.++.+
T Consensus 81 dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d 160 (349)
T cd08997 81 DGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFED 160 (349)
T ss_pred CCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEec
Confidence 599999998763211 11246799999999844 44344445555422 1 112335566654
Q ss_pred c-CCeEEEEeccCCCCC---------------------------cceEEEEEEcCCCCCccceEEEcCCCceecCCCCCC
Q 009698 85 P-DGQIVMLYTGSTDKS---------------------------VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIG 136 (528)
Q Consensus 85 ~-~g~~~~~YTg~~~~~---------------------------~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~ 136 (528)
+ +|.++|++.++.... ...+++|++++. .+.+|+-+ .|++.....
T Consensus 161 ~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~~v-- 233 (349)
T cd08997 161 PETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLLEANGV-- 233 (349)
T ss_pred CCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--CccccCCCc--
Confidence 4 588999999876421 135678877642 14789876 688764321
Q ss_pred CCCccCCeeEEEcCCCcEEEEEEeecC-------CeeEEEEEEcCCCC
Q 009698 137 PKDFRDPTTAWAGPDGKWRLTIGSKIG-------KTGISLVYQTTDFK 177 (528)
Q Consensus 137 ~~~~RDP~V~~~~~~g~~~m~~g~~~~-------~~G~i~ly~S~DL~ 177 (528)
...+.+|.| ++ .+|+|||+..++.. ....+..|.|++|.
T Consensus 234 ~d~~E~P~v-~~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~ 279 (349)
T cd08997 234 NDELERPHV-VF-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLR 279 (349)
T ss_pred CCceEcceE-EE-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCC
Confidence 235789999 54 79999999775421 11135567888764
No 59
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.91 E-value=0.00039 Score=69.90 Aligned_cols=137 Identities=15% Similarity=0.040 Sum_probs=84.5
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcc-ccee-cc-cccCCCCCCCCCcEEEeeEEEccCCeEEEEeccC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLY-LP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGS 96 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv-~W~~-~p-~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~ 96 (528)
..+++++|+|||||..+ ...++|+|+|.. .|++ .+ +.+.+.. ......+++++.+.+|+++|+|.+.
T Consensus 69 P~v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~~~~~ 138 (275)
T cd09004 69 PSVIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLYWGGW 138 (275)
T ss_pred CeEEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEEEcCc
Confidence 57888999999999864 358999999975 7887 33 3343321 1234567888877789999999753
Q ss_pred CCCCcceEEEE-EEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeec-C-CeeEEEEEEc
Q 009698 97 TDKSVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-G-KTGISLVYQT 173 (528)
Q Consensus 97 ~~~~~~~q~lA-~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~-~-~~G~i~ly~S 173 (528)
. ...++ .+.|. .+|+.. ..++...+. .-+--|.+ ++ .+|+|||++.+.. . ..-++...+|
T Consensus 139 ~-----~~~i~~l~~d~-----~~~~~~--~~~~~~~~~---~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~ya~s 201 (275)
T cd09004 139 G-----HCNVAKLNEDM-----ISFDGE--RDGSEITPK---NYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVAYAMA 201 (275)
T ss_pred C-----CEEEEEECCCc-----ccccCc--ceeeeccCC---CceecceE-EE-ECCEEEEEEECCCCCCCCceEEEEEc
Confidence 1 12233 34443 456432 112211111 13568988 55 7899999987642 1 2225666788
Q ss_pred CCCC-CCeecc
Q 009698 174 TDFK-TYELLD 183 (528)
Q Consensus 174 ~DL~-~W~~~~ 183 (528)
+++. -|+..+
T Consensus 202 ~~~~GP~~~~~ 212 (275)
T cd09004 202 DSPLGPFERPG 212 (275)
T ss_pred CCCCCCcccCC
Confidence 8754 376654
No 60
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.89 E-value=0.00061 Score=68.31 Aligned_cols=143 Identities=16% Similarity=0.173 Sum_probs=88.5
Q ss_pred ceeEEE--CCEEEEEeeeCCCCCCCCCceEEEEEeCCcc-cceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEeccC
Q 009698 20 AGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGS 96 (528)
Q Consensus 20 ng~~~~--~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv-~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~ 96 (528)
.-++|+ +|+|||||.....+ .+..+.|+|+|++.. .|+.++..+ |. ......+++++++||+.+|+|...
T Consensus 68 P~v~y~~~~g~Y~m~~~~~~~~--~~~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Yl~~~~~ 140 (265)
T cd08985 68 PKVIYNAKTGKYVMWMHIDSSD--YSDARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAYLLYSDR 140 (265)
T ss_pred CeEEEeCCCCEEEEEEEeCCCC--CcceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEEEEEecC
Confidence 455664 59999999987532 245789999999875 688766433 21 223567888888899999999864
Q ss_pred CCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecC-CeeEEEEEEcCC
Q 009698 97 TDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVYQTTD 175 (528)
Q Consensus 97 ~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~-~~G~i~ly~S~D 175 (528)
.. ....++.-++. +..+ .+.+..... ......|.+ ++ .+|.|||++..... ....+..++|++
T Consensus 141 ~~---~~i~i~~L~~d----~~~~---~~~~~~~~~----~~~~EaP~i-~K-~~g~YYL~~S~~t~~~~~~~~y~~s~s 204 (265)
T cd08985 141 DN---SDLYIYRLTDD----YLSV---TGEVTTVFV----GAGREAPAI-FK-RNGKYYLLTSGLTGWNPNDARYATATS 204 (265)
T ss_pred CC---CceEEEEeCCC----cccc---cceEEEccC----CCccccceE-EE-ECCEEEEEEccCCCccCCceEEEEecC
Confidence 31 23455543321 1233 223332111 134578999 65 78999999875421 112355678877
Q ss_pred CC-CCeecccc
Q 009698 176 FK-TYELLDEY 185 (528)
Q Consensus 176 L~-~W~~~~~l 185 (528)
+. -|+..+.+
T Consensus 205 ~~GP~~~~~~~ 215 (265)
T cd08985 205 ILGPWTDLGNP 215 (265)
T ss_pred CCCCccccCcC
Confidence 54 57776654
No 61
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=97.85 E-value=3.3e-05 Score=77.61 Aligned_cols=77 Identities=19% Similarity=0.238 Sum_probs=53.0
Q ss_pred CceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEEEEcCCCCCCeecccccccC---------CCCCeee
Q 009698 126 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAV---------PGTGMWE 196 (528)
Q Consensus 126 ~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~ly~S~DL~~W~~~~~l~~~~---------~~~g~wE 196 (528)
||||. ..+.||.|+ + .++.|||+.+..... ..+.+|+|+||.+|+..+..+... ...++|
T Consensus 1 NPvi~-------~~~~DP~ii-~-~~~~yY~~~t~~~~~-~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSII-R-AGDDYYMASSTFEWF-PGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEE-E-ECCeEEEEECccccC-CCcEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 68874 256899995 4 678999997653222 236789999999999988765321 122477
Q ss_pred EeeEEEeeecCccceeecC
Q 009698 197 CVDFYPVAINGSVGLDTSA 215 (528)
Q Consensus 197 CPdlf~l~~~g~~~l~~~~ 215 (528)
||+++.++ |+.++.+++
T Consensus 70 AP~v~~~~--G~yy~yy~~ 86 (269)
T cd08989 70 APCLSYYD--GKFWLIYTA 86 (269)
T ss_pred cceEEEEC--CEEEEEEec
Confidence 99999985 544444443
No 62
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=97.82 E-value=0.0003 Score=71.13 Aligned_cols=76 Identities=18% Similarity=0.299 Sum_probs=52.4
Q ss_pred CCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEEEEcCCCCCCeecccccccCCCCCeeeEeeEEEee
Q 009698 125 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 204 (528)
Q Consensus 125 ~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~ly~S~DL~~W~~~~~l~~~~~~~g~wECPdlf~l~ 204 (528)
.||||. ..+.||.|+ + .++.|||+.++. +..+.+.+|+|+||.+|+..+..+... ..++| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~-~-~~~~yY~~~t~~-~~~~gi~i~~S~DL~~W~~~g~~~~~~-~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSIL-R-DGEDYYMTHSSF-KYTPGLVIWHSRDLVNWTPVGPALPEY-EGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEE-E-ECCEEEEEEcch-hcCCCEEEEECCCcCCceEccccccCC-CCCEE-cCeeEEEC
Confidence 389986 245799995 4 578999976532 222357899999999999988765431 23489 79999875
Q ss_pred ecCccceeec
Q 009698 205 INGSVGLDTS 214 (528)
Q Consensus 205 ~~g~~~l~~~ 214 (528)
|+.++.++
T Consensus 75 --gkyy~yys 82 (280)
T cd09002 75 --GRYYIYFP 82 (280)
T ss_pred --CEEEEEEE
Confidence 44443333
No 63
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=97.79 E-value=0.00014 Score=78.20 Aligned_cols=131 Identities=15% Similarity=0.098 Sum_probs=82.7
Q ss_pred eEEECCEEEEEeeeCC-CCC--CCCCc-eEEEEEeCCcccceecc--cccCCCCCCCCCcEEEeeEEEccCCeEEEEecc
Q 009698 22 PLFYKGWYHLFYQYNP-DSA--VWGNI-TWGHAVSADLIHWLYLP--IAMVPDQWYDINGVWTGSATILPDGQIVMLYTG 95 (528)
Q Consensus 22 ~~~~~G~yHlfyq~~p-~~~--~~g~~-~wgha~S~Dlv~W~~~p--~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg 95 (528)
++..+|+|||||..+- ... ...+. .-.+|+|+|+.+|+..+ ++|.+...+.....-++.++..++|+++|++.+
T Consensus 74 av~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~ 153 (437)
T smart00640 74 AVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGA 153 (437)
T ss_pred EEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEE
Confidence 4456889999998652 111 11222 23788999999999973 666554433333344566654434689999886
Q ss_pred CCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCC-----cEEEEEEee
Q 009698 96 STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG-----KWRLTIGSK 161 (528)
Q Consensus 96 ~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g-----~~~m~~g~~ 161 (528)
...+..-.+.++.|+|. .+|+.. .+++.++.+.....|-.|-+ |+ -++ +|+|+++..
T Consensus 154 ~~~~~~G~i~ly~S~Dl-----~~W~~~--~~~~~~~~~~~g~~wECPdl-f~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 154 SDEDKTGIALLYRSTDL-----KNWTLL--GELLHSGVGDTGGMWECPDL-FP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EecCCCeEEEEEECCCc-----ccCeEC--CcccccCCCCccceEECCcE-EE-eCCCCCceeEEEEECcC
Confidence 65444456778888884 899886 45554311111146788988 44 445 899998765
No 64
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.69 E-value=0.00045 Score=70.25 Aligned_cols=67 Identities=15% Similarity=0.060 Sum_probs=47.4
Q ss_pred CCccCCeeEEEcCCCcEEEEEEeecCC----eeEEEEEEcCCCCCCeecccccccCC---CCCeeeEeeEEEee
Q 009698 138 KDFRDPTTAWAGPDGKWRLTIGSKIGK----TGISLVYQTTDFKTYELLDEYLHAVP---GTGMWECVDFYPVA 204 (528)
Q Consensus 138 ~~~RDP~V~~~~~~g~~~m~~g~~~~~----~G~i~ly~S~DL~~W~~~~~l~~~~~---~~g~wECPdlf~l~ 204 (528)
..+|||+|++.+.+|.|||+..+.... ...+.+|+|+||++|+..+.++.... ......+|+++..+
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~ 77 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK 77 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC
Confidence 358999997544589999997754211 12378999999999999887764322 12245689999875
No 65
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=97.63 E-value=0.0015 Score=65.93 Aligned_cols=141 Identities=14% Similarity=0.106 Sum_probs=81.7
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcc-c-----ceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEe
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-H-----WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 93 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv-~-----W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~Y 93 (528)
..+.+++|+|||||.....+. .....|.|+|++.. - |+..++.+.+... .......+++++++||+++|+|
T Consensus 60 P~v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~~Yl~~ 136 (279)
T cd08988 60 PDIYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQPWLSF 136 (279)
T ss_pred ceEEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCCEEEEe
Confidence 577889999999998765432 24578999999864 3 5443343333322 1233568889888889999999
Q ss_pred ccCCCCCcceEEEE-EEcCCCCCccceEEEcCCC--ceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEee--c---CCe
Q 009698 94 TGSTDKSVQVQNLA-YPADPSDPLLLDWVKYPGN--PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK--I---GKT 165 (528)
Q Consensus 94 Tg~~~~~~~~q~lA-~s~D~~d~~l~~w~k~~~~--Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~--~---~~~ 165 (528)
..... . +.++ .+.|.. ... .... .++..+. ......=|++ ++ .+|.|||++.+. . ...
T Consensus 137 g~~~~-g---i~~~eL~~d~~-----~~~-~~~~~~~i~~~~~--~~~~~Egp~i-~k-~~g~YYl~~S~g~~~~~~~~~ 202 (279)
T cd08988 137 GSFWG-G---IKLFELDKDTM-----KPA-EPGELHSIAGRER--SSAAIEAPFI-LY-RGDYYYLFVSFGLCCRGGDST 202 (279)
T ss_pred cccCC-C---EEEEEECcccC-----Ccc-CCCcceEEeccCC--CCCceEeeEE-EE-cCCeEEEEEEcCcccCCCCCC
Confidence 64321 1 2233 333321 110 0111 1222111 1123467888 55 789999987653 1 122
Q ss_pred eEEEEEEcCCCC
Q 009698 166 GISLVYQTTDFK 177 (528)
Q Consensus 166 G~i~ly~S~DL~ 177 (528)
-++.+++|+++.
T Consensus 203 y~v~~arS~~~~ 214 (279)
T cd08988 203 YKIAVGRSKNIT 214 (279)
T ss_pred eEEEEEEeCCCC
Confidence 357788998763
No 66
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.61 E-value=0.0013 Score=66.02 Aligned_cols=130 Identities=14% Similarity=0.094 Sum_probs=79.5
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcc-cceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEeccCCC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTD 98 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv-~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~~ 98 (528)
..+.+.+|+|||||-.+. .+.+.|+|++.. .|++.+... ...++++++++||+.+|+|.+.
T Consensus 79 P~v~~~~gkyy~yys~~~-------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~~~-- 140 (269)
T cd09001 79 PSLRYHNGTFYVFFCTNT-------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYGGG-- 140 (269)
T ss_pred CceEEECCEEEEEEEecC-------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeCCC--
Confidence 578889999999997751 135678887754 787665321 2457788888899999999653
Q ss_pred CCcceEEEEE-EcCCCCCccceEEEcCCCce-ecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEEEEcCCC
Q 009698 99 KSVQVQNLAY-PADPSDPLLLDWVKYPGNPV-LVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDF 176 (528)
Q Consensus 99 ~~~~~q~lA~-s~D~~d~~l~~w~k~~~~Pv-i~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~ly~S~DL 176 (528)
.+.++. +.|. .... ...++ +..+.. ......-|++ ++ .+|.|||++.+.......+.+++|+++
T Consensus 141 ----~i~~~~l~~d~-----~~~~--~~~~~~~~~~~~-~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~s~~~ 206 (269)
T cd09001 141 ----TIRLVELSPDL-----TGVG--GKDQVIIDAGEE-IGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLRSKSL 206 (269)
T ss_pred ----cEEEEEECccc-----CCcC--CCceEEEeCCCc-cccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEEeCCC
Confidence 234443 3332 2221 12233 333211 1124567888 55 789999998764212234567889885
Q ss_pred CC-Cee
Q 009698 177 KT-YEL 181 (528)
Q Consensus 177 ~~-W~~ 181 (528)
.. |+.
T Consensus 207 ~GP~~~ 212 (269)
T cd09001 207 TGPYES 212 (269)
T ss_pred CCCcCC
Confidence 43 554
No 67
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=97.51 E-value=0.0044 Score=63.64 Aligned_cols=147 Identities=11% Similarity=0.126 Sum_probs=87.1
Q ss_pred ceeEEEC----CEEEEEeeeCCCCCCCCCceEEEEEeCCcc-cceec-cc-ccCCCC-CCC-CCcEEEeeEEEccCCeEE
Q 009698 20 AGPLFYK----GWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYL-PI-AMVPDQ-WYD-INGVWTGSATILPDGQIV 90 (528)
Q Consensus 20 ng~~~~~----G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv-~W~~~-p~-al~p~~-~~d-~~gv~sGs~v~~~~g~~~ 90 (528)
..+++++ |+|||||... ....+.|+|++.. .|+++ +. .+.+.. ..+ ......+++++++||+.|
T Consensus 81 P~v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG~~Y 153 (311)
T cd09003 81 PSIAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDGQGY 153 (311)
T ss_pred CceEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCCCEE
Confidence 6778888 9999999532 2458999999965 89975 32 222211 111 112468888888899999
Q ss_pred EEeccCCC----CCcceEEEEEEc-CCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeec---
Q 009698 91 MLYTGSTD----KSVQVQNLAYPA-DPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--- 162 (528)
Q Consensus 91 ~~YTg~~~----~~~~~q~lA~s~-D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~--- 162 (528)
|+|.+... ...+.+.+|... |. .+ ..+.++....+ ..+.=|++ ++ .+|.|||++.+.-
T Consensus 154 l~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~---~~g~~~~i~~~----~~~Egp~~-~K-~~G~YYL~ys~~~~~~ 219 (311)
T cd09003 154 LYFGGGVPGGRWANPNTARVIKLGDDM-----IS---VDGSAVTIDAP----YFFEASGL-HK-INGTYYYSYCTNFGGR 219 (311)
T ss_pred EEECCccCCCccccCCCEEEEEeCCCc-----ee---ccCCceEccCC----CceEeeeE-EE-ECCEEEEEEeCCCCcc
Confidence 99975321 111334555443 32 22 22233322111 24567888 55 7999999987531
Q ss_pred ----CCeeEEEEEEcCCC-CCCeecccccc
Q 009698 163 ----GKTGISLVYQTTDF-KTYELLDEYLH 187 (528)
Q Consensus 163 ----~~~G~i~ly~S~DL-~~W~~~~~l~~ 187 (528)
....++...+|+++ =-|+..++++.
T Consensus 220 ~~~~~~~y~v~y~~s~~~~GP~~~~g~il~ 249 (311)
T cd09003 220 DPGKPPPGRIAYMTSKNPMGPFTYKGIILK 249 (311)
T ss_pred CCCCCCceeEEEEEcCCCCCCcccCCEecc
Confidence 22335656678764 35777665543
No 68
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.37 E-value=0.0046 Score=62.60 Aligned_cols=140 Identities=15% Similarity=0.068 Sum_probs=83.8
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCc-ccceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEeccCCC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL-IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTD 98 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dl-v~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~~ 98 (528)
.-+++++|+|||||...... +....+.|+|+|. -.|++. . +.+. .+..++++.+++|+++|+|.....
T Consensus 71 P~v~~~~g~yy~yy~~~~~~---~~~~~~v~~s~~p~gpw~~~-~-~~~~------~~iDp~vf~d~dG~~Y~~~~~~~~ 139 (288)
T cd09000 71 PTIRYHDGTFYLITTNVDGM---KDGGNFIVTADDPAGPWSDP-V-WLDS------GGIDPSLFFDDDGKVYLVGNGWDE 139 (288)
T ss_pred ceEEEECCEEEEEEEecCCC---CCCceEEEEeCCCCCCCcCC-E-ecCC------CccCCceeEcCCCCEEEEecccCC
Confidence 67888999999999876432 2345678999888 378742 2 2221 456788887778999998865432
Q ss_pred C----CcceEEEEEEcCCCCCccceEEEcCCCc--eecCCCCCCCCCccCCeeEEEcCCCcEEEEEEee-cCCeeEEEEE
Q 009698 99 K----SVQVQNLAYPADPSDPLLLDWVKYPGNP--VLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK-IGKTGISLVY 171 (528)
Q Consensus 99 ~----~~~~q~lA~s~D~~d~~l~~w~k~~~~P--vi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~-~~~~G~i~ly 171 (528)
. ....+.++..+. ..++-. +.| +..... ....--|.| ++ .+|+|||++... ....-++.++
T Consensus 140 ~~~~~~~~~i~~~~l~~------~~~~~~-~~~~~~~~~~~---~~~~Egp~v-~k-~~g~YYl~ys~~~~~~~~~v~~~ 207 (288)
T cd09000 140 RRGYNGHGGIWLQEIDL------ETGKLL-GEPKVIWNGTG---GRWPEGPHL-YK-RDGWYYLLIAEGGTGYGHSVTVA 207 (288)
T ss_pred ccccCCCCcEEEEEEcc------ccCCCC-CCcEEEEeCCC---CCCcccCeE-EE-ECCEEEEEEecCCCCCCeEEEEE
Confidence 1 123445554332 122211 222 222111 123457888 55 789999998653 2222357788
Q ss_pred EcCCCC-CCeec
Q 009698 172 QTTDFK-TYELL 182 (528)
Q Consensus 172 ~S~DL~-~W~~~ 182 (528)
+|+++. -|+..
T Consensus 208 ~s~~~~Gp~~~~ 219 (288)
T cd09000 208 RSRSITGPYEPA 219 (288)
T ss_pred EeCCCCCCCccC
Confidence 999876 56653
No 69
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.32 E-value=0.0068 Score=61.33 Aligned_cols=139 Identities=15% Similarity=0.132 Sum_probs=79.2
Q ss_pred ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccc-cCCCCCCCCC--cEEEeeEEEccCCeEEEEeccC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIA-MVPDQWYDIN--GVWTGSATILPDGQIVMLYTGS 96 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~a-l~p~~~~d~~--gv~sGs~v~~~~g~~~~~YTg~ 96 (528)
..++.++|+++|||...-.....+..-|. +...|...+...+.. ..|...|+.. .+..|+.++..+|.++|+|++.
T Consensus 116 p~~~~ddG~~Yl~~~~~~~~~~~~~~i~~-~~l~~~~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G~yYl~yS~~ 194 (288)
T cd08980 116 GTVFEHNGQLYFVWSGWEGRTNGNQNLYI-AKMSNPWTLTGPRVLISRPEYDWERQGPGVNEGPAALKRNGKVFLTYSAS 194 (288)
T ss_pred eEEEEECCEEEEEEEccCCCCCCCccEEE-EECCCCCccCCcceEecCCCCCceecCceeeECcEEEEECCEEEEEEECC
Confidence 67777899999998542211111112233 333344455433333 3455556554 4678888888899999999976
Q ss_pred CC-CCcceEEEEEEcCCCCCcc-ceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCc-EEEEEEee
Q 009698 97 TD-KSVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGK-WRLTIGSK 161 (528)
Q Consensus 97 ~~-~~~~~q~lA~s~D~~d~~l-~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~-~~m~~g~~ 161 (528)
.. .....+++|+++...+++. ..|++. .+||+.....-....--.+.| +...+|+ |+|++=+.
T Consensus 195 ~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~-~~pil~~~~~~~~~g~GH~~i-v~~~~G~~~~~~yH~~ 260 (288)
T cd08980 195 GSWTPDYCLGLLTADGGADLLDPASWTKS-PTPVFQSSPENGVYGPGHNSF-TKSPDGTEDWIVYHAR 260 (288)
T ss_pred CCCCCCCEEEEEEEcCCCCCCChhhCcCC-CCCceecCCCCccCcCCccce-EECCCCCEEEEEEccc
Confidence 53 3334567888765322211 248886 479887533101111234456 4456787 88887543
No 70
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=97.29 E-value=0.0018 Score=69.42 Aligned_cols=151 Identities=20% Similarity=0.291 Sum_probs=86.1
Q ss_pred EEEEEeCCcccceecccccCCCCCC-------CCCcEEEeeEEEccCCeEEEEeccCCCCC---cceEEEEEEcCCCCCc
Q 009698 47 WGHAVSADLIHWLYLPIAMVPDQWY-------DINGVWTGSATILPDGQIVMLYTGSTDKS---VQVQNLAYPADPSDPL 116 (528)
Q Consensus 47 wgha~S~Dlv~W~~~p~al~p~~~~-------d~~gv~sGs~v~~~~g~~~~~YTg~~~~~---~~~q~lA~s~D~~d~~ 116 (528)
-.-+.|+||+||+...-.|.+...+ +.+|||..++. ..||+++|+||...... .......++.+..
T Consensus 55 l~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~--- 130 (549)
T COG3507 55 LAIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESI--- 130 (549)
T ss_pred eeeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCC---
Confidence 4567899999999887656554422 35789999986 68999999998654321 1122233333221
Q ss_pred cceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCC------eeEEEEEEcC---CCCCCeecccccc
Q 009698 117 LLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK------TGISLVYQTT---DFKTYELLDEYLH 187 (528)
Q Consensus 117 l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~------~G~i~ly~S~---DL~~W~~~~~l~~ 187 (528)
...|.. |+.-+.. .--||.+|+ +++|+-+|+.+..... .+.++-..++ .|..+.+ +.++.
T Consensus 131 ~G~WsD----pi~l~~~-----~~iDPslf~-D~dGr~wlv~~~w~~~~~~~~~~~i~l~~~~~~~~~l~g~~~-~~~~~ 199 (549)
T COG3507 131 DGPWSD----PIKLNGS-----NAIDPSLFF-DKDGRKWLVNGSWDGGIFMHSFAGIILQEYDKTTQKLVGQGY-KIIFD 199 (549)
T ss_pred CCCccc----ceecCCc-----CccCCceee-cCCCCEEEEecccCCCcccccccceeeeeccccccccCCccc-eeEec
Confidence 135643 4433211 236999965 6889999998865311 1333322221 2333322 22322
Q ss_pred cCCCCCeeeEeeEEEeeecCccceeecC
Q 009698 188 AVPGTGMWECVDFYPVAINGSVGLDTSA 215 (528)
Q Consensus 188 ~~~~~g~wECPdlf~l~~~g~~~l~~~~ 215 (528)
. ...+..|-|-|++.+ +..+|+.+.
T Consensus 200 G-~~~~~~EGPhl~k~~--gYYYL~~a~ 224 (549)
T COG3507 200 G-GNGGLTEGPHLYKKT--GYYYLYVAE 224 (549)
T ss_pred c-CCCccccCceeeccC--CEEEEEEEc
Confidence 1 122368999888875 444455444
No 71
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=97.10 E-value=0.021 Score=56.89 Aligned_cols=157 Identities=18% Similarity=0.277 Sum_probs=90.3
Q ss_pred CCEEEEEeeeCCCCCCCCCceEEEEEeCC-cccceecccccCCCCCCCCCcEEEeeEEEccCCeEEEE-eccCCCCCcce
Q 009698 26 KGWYHLFYQYNPDSAVWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML-YTGSTDKSVQV 103 (528)
Q Consensus 26 ~G~yHlfyq~~p~~~~~g~~~wgha~S~D-lv~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~-YTg~~~~~~~~ 103 (528)
+|+.||||........|......+.+|+| ..+|.... .|.+.......+...+.++...+|++++- |.. . .....
T Consensus 58 ~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~~~~~i~~~~G~l~~~~~~~-~-~~~~~ 134 (275)
T PF13088_consen 58 DGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPGRGPPIQLPDGRLIAPYYHE-S-GGSFS 134 (275)
T ss_dssp TSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECSEEEEEEECTTEEEEEEEEE-S-SCEEE
T ss_pred CCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceeccceeeeeEecCCCEEEEEeec-c-ccCcc
Confidence 89999999665554444444545599999 79999754 33333222223444554444568887765 433 1 12355
Q ss_pred EEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEEEEcCC-CCCCeec
Q 009698 104 QNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELL 182 (528)
Q Consensus 104 q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~ly~S~D-L~~W~~~ 182 (528)
..+.+|+|+| .+|+... ++.. ....--|.++ ...+|..+|++... . .+.+.++.|.| ..+|+..
T Consensus 135 ~~~~~S~D~G----~tW~~~~--~~~~------~~~~~e~~~~-~~~dG~l~~~~R~~-~-~~~~~~~~S~D~G~TWs~~ 199 (275)
T PF13088_consen 135 AFVYYSDDGG----KTWSSGS--PIPD------GQGECEPSIV-ELPDGRLLAVFRTE-G-NDDIYISRSTDGGRTWSPP 199 (275)
T ss_dssp EEEEEESSTT----SSEEEEE--ECEC------SEEEEEEEEE-EETTSEEEEEEEEC-S-STEEEEEEESSTTSS-EEE
T ss_pred eEEEEeCCCC----ceeeccc--cccc------cCCcceeEEE-ECCCCcEEEEEEcc-C-CCcEEEEEECCCCCcCCCc
Confidence 6778899986 8998752 2211 1123456663 34788888887653 2 22667788877 8999874
Q ss_pred ccccccCCCCCeeeEeeEEEee
Q 009698 183 DEYLHAVPGTGMWECVDFYPVA 204 (528)
Q Consensus 183 ~~l~~~~~~~g~wECPdlf~l~ 204 (528)
..+..+ .. -.++.+.++.
T Consensus 200 ~~~~~~--~~--~~~~~~~~~~ 217 (275)
T PF13088_consen 200 QPTNLP--NP--NSSISLVRLS 217 (275)
T ss_dssp EEEECS--SC--CEEEEEEECT
T ss_pred eecccC--cc--cCCceEEEcC
Confidence 322111 11 1445666664
No 72
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=96.94 E-value=0.025 Score=58.78 Aligned_cols=151 Identities=19% Similarity=0.187 Sum_probs=90.2
Q ss_pred ccceeEEEC-CEEEEEeeeCCCCC-------CCCCceEEEEEeCCc-ccceecccccCCCCC-CCCCcEE--EeeEEEcc
Q 009698 18 MIAGPLFYK-GWYHLFYQYNPDSA-------VWGNITWGHAVSADL-IHWLYLPIAMVPDQW-YDINGVW--TGSATILP 85 (528)
Q Consensus 18 ~Nng~~~~~-G~yHlfyq~~p~~~-------~~g~~~wgha~S~Dl-v~W~~~p~al~p~~~-~d~~gv~--sGs~v~~~ 85 (528)
+|..+++.. |+-+|||...+... .+...+..+..|.|. ..|.. |..|.+... .+-...+ .|+.++..
T Consensus 77 ~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~-p~~l~~~~~~~~~~~~~~~~g~gi~l~ 155 (351)
T cd00260 77 KDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSS-PRDLTPSVKGDNWAALFTGPGSGIQMK 155 (351)
T ss_pred EcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecC-CccCCccccCcceeEEEecCcCeEEec
Confidence 335666666 99999998877642 123456778888887 79975 434443321 1112233 23344445
Q ss_pred CCeEEEEeccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCe
Q 009698 86 DGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 165 (528)
Q Consensus 86 ~g~~~~~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~ 165 (528)
+|++++.+.+....+.....+.+|+|.| .+|+... +. .+ ......|.|+ .-.+|..+|+..... .
T Consensus 156 ~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~--~~----~~~~~e~~i~-el~dG~l~~~~R~~~--~ 220 (351)
T cd00260 156 DGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV--ND----AGGCSECSVV-ELSDGKLYMYTRDNS--G 220 (351)
T ss_pred CCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC--CC----CCCCcCCEEE-EecCCEEEEEEeeCC--C
Confidence 7887765544333233456677899876 8997632 11 11 1234568885 335888888766532 3
Q ss_pred eEEEEEEcCC-CCCCeeccc
Q 009698 166 GISLVYQTTD-FKTYELLDE 184 (528)
Q Consensus 166 G~i~ly~S~D-L~~W~~~~~ 184 (528)
+...+|.|.| ..+|+....
T Consensus 221 ~~~~~~~S~D~G~tWs~~~~ 240 (351)
T cd00260 221 GRRPVYESRDMGTTWTEALG 240 (351)
T ss_pred CcEEEEEEcCCCcCcccCcC
Confidence 5666788877 599987443
No 73
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=96.86 E-value=0.25 Score=49.11 Aligned_cols=161 Identities=17% Similarity=0.098 Sum_probs=87.4
Q ss_pred CEEEEEeeeCCCCCCCCCceEEEEEe--CCc-ccceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEeccCCCC---C
Q 009698 27 GWYHLFYQYNPDSAVWGNITWGHAVS--ADL-IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK---S 100 (528)
Q Consensus 27 G~yHlfyq~~p~~~~~g~~~wgha~S--~Dl-v~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~~~---~ 100 (528)
|+...++.. +...+.......+| +|. .+|...-.+..+. -....+..++++++.+|+++|||+..... .
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 556666665 33344555666666 988 7898754333333 12345677777766799999999543321 1
Q ss_pred cceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCeeEEEEEEc-CCCCCC
Q 009698 101 VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQT-TDFKTY 179 (528)
Q Consensus 101 ~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G~i~ly~S-~DL~~W 179 (528)
.......+|.|+| .+|+... +|...+........+.+-+. -.+|.+++..-........+.++.| +..+.|
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~i~--~~~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW 147 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPPIQ--LPDGRLIAPYYHESGGSFSAFVYYSDDGGKTW 147 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEEEE--ECTTEEEEEEEEESSCEEEEEEEEESSTTSSE
T ss_pred ceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeeeeE--ecCCCEEEEEeeccccCcceEEEEeCCCCcee
Confidence 1222238899976 8998752 33322111111123443332 2578877763222222344455555 558999
Q ss_pred eecccccccCCCCCeeeEeeEEEee
Q 009698 180 ELLDEYLHAVPGTGMWECVDFYPVA 204 (528)
Q Consensus 180 ~~~~~l~~~~~~~g~wECPdlf~l~ 204 (528)
+....+. ...+.+| |.+++++
T Consensus 148 ~~~~~~~---~~~~~~e-~~~~~~~ 168 (275)
T PF13088_consen 148 SSGSPIP---DGQGECE-PSIVELP 168 (275)
T ss_dssp EEEEECE---CSEEEEE-EEEEEET
T ss_pred ecccccc---ccCCcce-eEEEECC
Confidence 9876553 1112333 6777775
No 74
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=96.75 E-value=0.035 Score=55.64 Aligned_cols=141 Identities=11% Similarity=0.135 Sum_probs=79.3
Q ss_pred ceeEEE--CCEEEEEeeeCCCCCCCCCceEEEEEeCCcc---cceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEec
Q 009698 20 AGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLI---HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYT 94 (528)
Q Consensus 20 ng~~~~--~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv---~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YT 94 (528)
.-++|+ +++|+|+||+.+ ...+||+|.. -|...-+.+.....-...+..+-.+ +.+++++|||+.
T Consensus 81 PqVfyf~pk~kwYL~Yq~~~---------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YLff~ 150 (303)
T cd08987 81 PQVFYFAPQNKWYLIYQWWP---------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYLFFS 150 (303)
T ss_pred CEEeeeccCCEEEEEEecCc---------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEEEEe
Confidence 566765 599999999732 5699999975 4765433333222222234455666 467899999998
Q ss_pred cCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCC--cEEEEEEeecCCeeE-EEEE
Q 009698 95 GSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG--KWRLTIGSKIGKTGI-SLVY 171 (528)
Q Consensus 95 g~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g--~~~m~~g~~~~~~G~-i~ly 171 (528)
+-.. .+..|.... .+|-..-..++..-.+.-...-|.-|.| ++ .+| +|+|++-|.....++ ..-+
T Consensus 151 ~dnG----~iyra~~~~------~nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~rYfrs~ 218 (303)
T cd08987 151 DDNG----KLYRSSTTL------GNFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGRYFRSW 218 (303)
T ss_pred cCCC----eEEEEecch------hhCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCCeEEEE
Confidence 7542 334443322 1222111123221110111245788999 66 555 899999775321222 2236
Q ss_pred EcCCCC-CCeec
Q 009698 172 QTTDFK-TYELL 182 (528)
Q Consensus 172 ~S~DL~-~W~~~ 182 (528)
+|+.|- .|+..
T Consensus 219 Ts~Sl~GpWt~~ 230 (303)
T cd08987 219 TATSLDGPWTPL 230 (303)
T ss_pred EcCCCCCCceec
Confidence 677764 68765
No 75
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=96.48 E-value=0.024 Score=57.71 Aligned_cols=79 Identities=14% Similarity=0.167 Sum_probs=50.8
Q ss_pred cEEEeeEEEccCCeEEEEeccCCCC-CcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCc
Q 009698 75 GVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGK 153 (528)
Q Consensus 75 gv~sGs~v~~~~g~~~~~YTg~~~~-~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~ 153 (528)
++..|..+...+|+++|+|++.... ..-.+.+|+|++. +..|++...+||+..+.+. ...--...+ +...+|+
T Consensus 159 ~~~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p----~GP~~~~~~~pil~~~~~~-~~g~GH~s~-v~~~~G~ 232 (295)
T cd08982 159 PWMEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSP----LGPFTYQPHNPFSYKPGGF-ITGAGHGST-FQDKYGN 232 (295)
T ss_pred ccccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCC----CCCCCcCCCCccccCCCCe-EecCCcccE-EECCCCC
Confidence 4677888888899999999865322 2235678888764 4678877678988643321 011123345 3457888
Q ss_pred EEEEEE
Q 009698 154 WRLTIG 159 (528)
Q Consensus 154 ~~m~~g 159 (528)
|++++=
T Consensus 233 ~~~~yh 238 (295)
T cd08982 233 YWHVGT 238 (295)
T ss_pred EEEEEE
Confidence 888763
No 76
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=95.97 E-value=0.071 Score=54.58 Aligned_cols=114 Identities=21% Similarity=0.231 Sum_probs=75.1
Q ss_pred eeEEECCEEEEEeeeCCCCCCCCCceEEEEEe-CCcccceecc---cccCCCCCCCCCcEEEeeEEEccCCeEEEEeccC
Q 009698 21 GPLFYKGWYHLFYQYNPDSAVWGNITWGHAVS-ADLIHWLYLP---IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGS 96 (528)
Q Consensus 21 g~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S-~Dlv~W~~~p---~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~ 96 (528)
..+.+++++||||..+... +...-.+|+| .|.+||+..+ ++|......+..+.-+..++...++.++|+..+.
T Consensus 73 s~~~~~~~~~~~YTg~~~~---~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~~~~~~m~~g~~ 149 (308)
T PF00251_consen 73 SAVVDDDNLVLFYTGNNRD---GKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWREDGRWYMLLGAG 149 (308)
T ss_dssp EEEEETTCEEEEEEEEETT---TEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEECTTEEEEEEEEE
T ss_pred eEEEECCEEEEEEeccCCC---CCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEecCCEEEEEEecc
Confidence 3444688999999876542 1356788999 8899999843 4454222225667888988666789999887765
Q ss_pred CCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeE
Q 009698 97 TDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 146 (528)
Q Consensus 97 ~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~ 146 (528)
.. ....+.+..|+|. .+|+.. .++...... ....+--|-++
T Consensus 150 ~~-~~g~i~~y~S~Dl-----~~W~~~--~~l~~~~~~-~g~~~ECPdlf 190 (308)
T PF00251_consen 150 RD-GRGCILLYTSDDL-----IHWEYL--GPLFIPGDN-GGGMWECPDLF 190 (308)
T ss_dssp ET-TEEEEEEEEESSS-----SSEEEE--EEESEEETT-TSSEEEEEEEE
T ss_pred cc-CcceEEEEEcCCc-----ccCcee--Ccccccccc-cccccccceEE
Confidence 44 3445677788874 899886 444443221 12457788884
No 77
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=95.92 E-value=0.38 Score=46.81 Aligned_cols=169 Identities=14% Similarity=0.190 Sum_probs=89.9
Q ss_pred ecc-cCccc---ceeEEECCEEEEEeeeCCCCCCCCCceEEEEEeCCcccceecccccCCCCCCCCCcEEEeeEE-EccC
Q 009698 12 LCD-ENSMI---AGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT-ILPD 86 (528)
Q Consensus 12 ~~p-~gw~N---ng~~~~~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~p~al~p~~~~d~~gv~sGs~v-~~~~ 86 (528)
..| .||.. --+++++|+||+|.-..-.+.. ||...=.-+-+|.+...| +-..-+. +.-.+.++ ..+.
T Consensus 16 ~~Pk~g~~slKD~T~V~ynGk~~VyAtt~d~~~~-----y~sm~f~~Ftdws~~~sA--~q~~m~~-~~vAP~vFYFaPk 87 (271)
T PF03664_consen 16 AQPKSGWVSLKDFTIVPYNGKHHVYATTADTGGG-----YGSMNFGPFTDWSQMASA--SQNYMDQ-SAVAPQVFYFAPK 87 (271)
T ss_pred ccCCCCceeccCceEEeECCEEEEEEEeccCCCc-----cceEeeeccCCHHHhhcc--ccccCCc-ccccceEEEecCC
Confidence 568 99999 7889999999999987644443 554444455678776533 2111111 11222222 1356
Q ss_pred CeEEEEeccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeecCCee
Q 009698 87 GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG 166 (528)
Q Consensus 87 g~~~~~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~~~~G 166 (528)
...+|.|--.. ..-...++.|..++ ..|... .|++.....-.....-|..|+- ++..-||+.... .|
T Consensus 88 ~~W~L~yQwg~----~~fsY~Ts~Dptnp--ngWSap--q~lf~g~i~~~~~g~iD~~vI~--D~~n~yLFfa~D---nG 154 (271)
T PF03664_consen 88 NIWYLAYQWGP----AAFSYSTSSDPTNP--NGWSAP--QPLFSGSISGSGTGPIDQWVIC--DDTNMYLFFAGD---NG 154 (271)
T ss_pred cEEEEEEecCC----CcceeecCCCCCCC--ccCCCC--cccccccccCCCCCceeeEEEe--cCCceEEEEcCC---CC
Confidence 77888875211 11123345565555 358754 5665421111123457999874 233345554432 25
Q ss_pred EEEEEEcCCCCCCeeccccc------ccCCCCCeeeEeeEEEee
Q 009698 167 ISLVYQTTDFKTYELLDEYL------HAVPGTGMWECVDFYPVA 204 (528)
Q Consensus 167 ~i~ly~S~DL~~W~~~~~l~------~~~~~~g~wECPdlf~l~ 204 (528)
. ||+|.--+. .|-+.+. ..+.....+|.++.+++.
T Consensus 155 k--iYRs~~~i~-nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~ 195 (271)
T PF03664_consen 155 K--IYRSSMPIG-NFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK 195 (271)
T ss_pred c--EEEeccchh-hCCCCCCCceEEEEecCccceeeeeEEEEEc
Confidence 4 698854221 1111111 122223479999999997
No 78
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=91.96 E-value=10 Score=39.13 Aligned_cols=170 Identities=14% Similarity=0.131 Sum_probs=93.6
Q ss_pred ceeEEECCEEEEEeeeCCCC-CCCC-CceEEEEEeCCc-ccceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEeccC
Q 009698 20 AGPLFYKGWYHLFYQYNPDS-AVWG-NITWGHAVSADL-IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGS 96 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~-~~~g-~~~wgha~S~Dl-v~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~ 96 (528)
..++...+..-.|+-....+ ...+ .+....++|.|. .+|... .++..... ....+..++.+++.+|+++|||...
T Consensus 19 Psl~~~~~~lla~~e~r~~~~~D~~~~~~iv~~~S~D~G~tW~~~-~~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~ 96 (351)
T cd00260 19 PSLVCTPGTLLAFADARYGGCSDRSNAIDIVARRSTDGGKTWSPS-TVISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSF 96 (351)
T ss_pred ceEEEECCEEEEEEEEEEcCCCCCCcccceeEEEeccCCCccccc-EEehhcCC-CCCcEEcceEEEcCCCCEEEEEEEC
Confidence 44555555555555322212 1233 567788888875 899875 34444332 2345788888875449999999765
Q ss_pred CCC----------CcceEEEEEEcCCCCCccceEEEcCCCceecCC--CCCCCCCccCC--eeEEEcCCCcEEEEEEeec
Q 009698 97 TDK----------SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDP--TTAWAGPDGKWRLTIGSKI 162 (528)
Q Consensus 97 ~~~----------~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~--~~~~~~~~RDP--~V~~~~~~g~~~m~~g~~~ 162 (528)
... ....+.+.+|+|.| .+|.+. ..+.... ..+ ...++-| -+. . .+|+++|.+-...
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~S~D~G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~-l-~~Grlv~p~~~~~ 167 (351)
T cd00260 97 PNGEGEDNDYAGPSNAYLVLVYSDDDG----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQ-M-KDGRLVFPVYGGN 167 (351)
T ss_pred CCcccccccccCCCceEEEEEEEEcCC----ceecCC--ccCCccccCcce-eEEEecCcCeEE-e-cCCcEEEEEEEEc
Confidence 431 23457788898876 899753 2222211 111 1112333 232 2 4788877655432
Q ss_pred CC--eeEEEEEEcCCCCCCeecccccccCCCCCeeeEeeEEEee
Q 009698 163 GK--TGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 204 (528)
Q Consensus 163 ~~--~G~i~ly~S~DL~~W~~~~~l~~~~~~~g~wECPdlf~l~ 204 (528)
.. .-..++|..++.++|+..... . ...+..| |.++++.
T Consensus 168 ~~~~~~~~~~~S~D~G~tW~~~~~~-~--~~~~~~e-~~i~el~ 207 (351)
T cd00260 168 AGGRVSSAIIYSDDSGKTWKLGEGV-N--DAGGCSE-CSVVELS 207 (351)
T ss_pred CCCCEEEEEEEECCCCCCcEECCCC-C--CCCCCcC-CEEEEec
Confidence 21 223445555568999864322 1 1123456 7788885
No 79
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=91.82 E-value=0.7 Score=47.40 Aligned_cols=138 Identities=22% Similarity=0.388 Sum_probs=65.8
Q ss_pred ECCEEEEEe-eeCCCCCCCCCceEE--EEEeCCc-ccceecccccCCCCCCCC-CcEE--EeeEEEccCCeEEEEeccCC
Q 009698 25 YKGWYHLFY-QYNPDSAVWGNITWG--HAVSADL-IHWLYLPIAMVPDQWYDI-NGVW--TGSATILPDGQIVMLYTGST 97 (528)
Q Consensus 25 ~~G~yHlfy-q~~p~~~~~g~~~wg--ha~S~Dl-v~W~~~p~al~p~~~~d~-~gv~--sGs~v~~~~g~~~~~YTg~~ 97 (528)
.+...+|+. .|+... +...|+ ++.|.|- +.|.+.- .|..... .. ...+ =||.|+.+||++++=-.+..
T Consensus 68 kgn~IymLvG~y~~~~---~~~~~~llLvks~~~g~~W~~~~-~l~~~~~-~~~~~figgGGSGV~m~dGTLVFPv~a~~ 142 (310)
T PF13859_consen 68 KGNKIYMLVGSYSRSA---GADDWGLLLVKSTDGGIKWGDTK-SLPSTSF-QSWKQFIGGGGSGVVMEDGTLVFPVQATK 142 (310)
T ss_dssp ETTEEEEEEEEESS-----SSTTEEEEEEEEESSSSEE---E-E-GGGS--EEEEEEEE-SEE-EE-TTS-EEEEEEEEE
T ss_pred cceeEEEEEEEEeccc---cccccceeeeeccCCcceeeecc-cCCchhc-cccceeecCCCCceEEcCCCEEEEEeeec
Confidence 355555555 333211 223444 5566654 5798643 2211111 10 1221 13445557898877666655
Q ss_pred CCCc-ceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeE-EEcCCCcEEEEEEeecCCeeEEEEEEcCC
Q 009698 98 DKSV-QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDGKWRLTIGSKIGKTGISLVYQTTD 175 (528)
Q Consensus 98 ~~~~-~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~-~~~~~g~~~m~~g~~~~~~G~i~ly~S~D 175 (528)
+... ..-.|-+|.|.+ .+|+-..+. ....++||.|+ | ++|+-.|+.. +.+ |+-.+|+|.|
T Consensus 143 ~~~~~~~SlIiYS~d~g----~~W~lskg~---------s~~gC~~psv~EW--e~gkLlM~~~-c~~--g~rrVYeS~D 204 (310)
T PF13859_consen 143 KNGDGTVSLIIYSTDDG----KTWKLSKGM---------SPAGCSDPSVVEW--EDGKLLMMTA-CDD--GRRRVYESGD 204 (310)
T ss_dssp TT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE---TTEEEEEEE--TT--S---EEEESS
T ss_pred cCccceEEEEEEECCCc----cceEecccc---------CCCCcceEEEEec--cCCeeEEEEe-ccc--ceEEEEEEcc
Confidence 4444 366788999865 899754221 12467999997 5 4688777743 332 4555899988
Q ss_pred -CCCCee-cccc
Q 009698 176 -FKTYEL-LDEY 185 (528)
Q Consensus 176 -L~~W~~-~~~l 185 (528)
...|+. .+.|
T Consensus 205 mG~tWtea~gtl 216 (310)
T PF13859_consen 205 MGTTWTEALGTL 216 (310)
T ss_dssp TTSS-EE-TTTT
T ss_pred cceehhhccCcc
Confidence 588987 4443
No 80
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=91.26 E-value=2.3 Score=46.21 Aligned_cols=142 Identities=13% Similarity=0.083 Sum_probs=71.2
Q ss_pred ceeEEECCEEEEEeeeCCCCC-CCCCceEEEEEeCC-cccceecccccCCCCCCCCCcEEEeeEEEccCCeEEEEeccCC
Q 009698 20 AGPLFYKGWYHLFYQYNPDSA-VWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 97 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~~~-~~g~~~wgha~S~D-lv~W~~~p~al~p~~~~d~~gv~sGs~v~~~~g~~~~~YTg~~ 97 (528)
..++|+||+|+|+|-.-+... .|.+.+=-..+.++ .=.|.+ |+.+ +.. ..++.|.+.|++|+.+|+|-+..
T Consensus 94 Pdl~y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~G~WsD-pi~l-~~~-----~~iDPslf~D~dGr~wlv~~~w~ 166 (549)
T COG3507 94 PDLSYHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESIDGPWSD-PIKL-NGS-----NAIDPSLFFDKDGRKWLVNGSWD 166 (549)
T ss_pred cceecCCCcEEEEEecccccCCcccccccEEEEecCCCCCccc-ceec-CCc-----CccCCceeecCCCCEEEEecccC
Confidence 468899999999994333321 22222222333222 235665 2222 221 25778888899999999998876
Q ss_pred CCC--cceEEEEEEcCCCCCccceEEEcCC--CceecCCCCCCCCCccCCeeEEEcCCCcEEEEEEeec-CCee-EEEEE
Q 009698 98 DKS--VQVQNLAYPADPSDPLLLDWVKYPG--NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTG-ISLVY 171 (528)
Q Consensus 98 ~~~--~~~q~lA~s~D~~d~~l~~w~k~~~--~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m~~g~~~-~~~G-~i~ly 171 (528)
... ...-.+-.+... .+=.+..+ -+++-. +.+..--.-|.+ ++ ++|-|||+.+-+- ...| .+.++
T Consensus 167 ~~~~~~~~~~i~l~~~~-----~~~~~l~g~~~~~~~~--G~~~~~~EGPhl-~k-~~gYYYL~~a~gG~t~~gh~~~va 237 (549)
T COG3507 167 GGIFMHSFAGIILQEYD-----KTTQKLVGQGYKIIFD--GGNGGLTEGPHL-YK-KTGYYYLYVAEGGLTTYGHAIRVA 237 (549)
T ss_pred CCcccccccceeeeecc-----ccccccCCccceeEec--cCCCccccCcee-ec-cCCEEEEEEEcCCCCccceeEEEE
Confidence 421 000011111111 01111111 011111 111112245766 54 7888888876432 2233 47788
Q ss_pred EcCCCC
Q 009698 172 QTTDFK 177 (528)
Q Consensus 172 ~S~DL~ 177 (528)
||+.+.
T Consensus 238 RSKsid 243 (549)
T COG3507 238 RSKSID 243 (549)
T ss_pred eccCCC
Confidence 998754
No 81
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=90.83 E-value=1.4 Score=41.95 Aligned_cols=104 Identities=26% Similarity=0.512 Sum_probs=65.3
Q ss_pred eeEEECC-EEEEEeeeCCCCCCCCCceEEEEEeCCcccceec--cccc-CCCCCCCCCcEE--EeeEEEccCCeEEEEec
Q 009698 21 GPLFYKG-WYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYL--PIAM-VPDQWYDINGVW--TGSATILPDGQIVMLYT 94 (528)
Q Consensus 21 g~~~~~G-~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~--p~al-~p~~~~d~~gv~--sGs~v~~~~g~~~~~YT 94 (528)
..++|+| .|+++-|..|.- -|+.....|.-.+- |+-. |+.| .|.-+|+-.|.| .|.||+.++|++.+-|+
T Consensus 136 ttfeh~gk~yyvwaqkdp~i--~gnsniyiaemenp--wtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ys 211 (324)
T COG3940 136 TTFEHNGKLYYVWAQKDPNI--KGNSNIYIAEMENP--WTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYS 211 (324)
T ss_pred eeeeeCCEEEEEEeccCCCc--cCCcceEEEeccCC--ceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEe
Confidence 3455666 588888988863 35555566655443 5543 4444 344467777754 78898889999999998
Q ss_pred cCCCCCcceEEEEEEcC---CCCCccceEEEcCCCceecC
Q 009698 95 GSTDKSVQVQNLAYPAD---PSDPLLLDWVKYPGNPVLVP 131 (528)
Q Consensus 95 g~~~~~~~~q~lA~s~D---~~d~~l~~w~k~~~~Pvi~~ 131 (528)
....+..-..++-.... .-|+ .+|+|.+ .||+..
T Consensus 212 asatd~nycmgllwanen~dlldp--aswtksp-tpvf~t 248 (324)
T COG3940 212 ASATDVNYCMGLLWANENSDLLDP--ASWTKSP-TPVFKT 248 (324)
T ss_pred ccccccceeeeeeeecccCCcCCc--hhcccCC-Ccceee
Confidence 86543223334433332 2222 4799974 788864
No 82
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=84.12 E-value=28 Score=35.85 Aligned_cols=155 Identities=19% Similarity=0.184 Sum_probs=87.2
Q ss_pred ceeEEECCEEEEEeeeCCC-CC---CCCCceEEEEEeCC-cccceecccccCCCCCCCCCc------EEEeeEEEccCCe
Q 009698 20 AGPLFYKGWYHLFYQYNPD-SA---VWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDING------VWTGSATILPDGQ 88 (528)
Q Consensus 20 ng~~~~~G~yHlfyq~~p~-~~---~~g~~~wgha~S~D-lv~W~~~p~al~p~~~~d~~g------v~sGs~v~~~~g~ 88 (528)
.+.|-.+|+-+|.|+..-. ++ .|....=+.|.|.| ..+|+..|..+.+..+.- .| -|.-++....+|-
T Consensus 98 t~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a~~~~dgy 176 (316)
T PF13810_consen 98 TDGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAAFVKDDGY 176 (316)
T ss_pred cceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCccccccccc-CCccccccccccccccCCCCE
Confidence 6777889999999976421 11 23333457899999 689999986665554111 11 1222344345666
Q ss_pred EEEEeccCCCCCcceEEEEEEcC--CCCCc------cce--EEEcC--CCceecCCCCCCCCCccCCeeEEEcCCCcEEE
Q 009698 89 IVMLYTGSTDKSVQVQNLAYPAD--PSDPL------LLD--WVKYP--GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRL 156 (528)
Q Consensus 89 ~~~~YTg~~~~~~~~q~lA~s~D--~~d~~------l~~--w~k~~--~~Pvi~~~~~~~~~~~RDP~V~~~~~~g~~~m 156 (528)
+|+|=|...+. ....||+..- ..|.. ... |.+.. ..||+..+- --..|.|.+..|+|+|
T Consensus 177 VYv~gt~~~R~--g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~v-------gElSv~~~~~~gk~Vl 247 (316)
T PF13810_consen 177 VYVYGTPFGRN--GGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGPV-------GELSVRYNEYLGKWVL 247 (316)
T ss_pred EEEEeCCCCCC--CcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCCc-------cceEEEEeCCCCEEEE
Confidence 66666654443 2334554321 11110 012 65432 136665432 2234556667899999
Q ss_pred EEEeecCCeeEEEEEEcCCCC-CCeeccccc
Q 009698 157 TIGSKIGKTGISLVYQTTDFK-TYELLDEYL 186 (528)
Q Consensus 157 ~~g~~~~~~G~i~ly~S~DL~-~W~~~~~l~ 186 (528)
++... ..+.|.+.+++++. .|+....+.
T Consensus 248 ~~~~~--~~~~I~~RtA~~P~GpWs~~~~l~ 276 (316)
T PF13810_consen 248 SYFDA--GTGGIVLRTAPSPTGPWSEPKPLV 276 (316)
T ss_pred EEecc--cCCcEEEEecCCCCCCCCCCeeEE
Confidence 97643 23567788888877 587655544
No 83
>PTZ00334 trans-sialidase; Provisional
Probab=77.76 E-value=14 Score=42.46 Aligned_cols=85 Identities=20% Similarity=0.328 Sum_probs=51.6
Q ss_pred eeEEEccCCeEEEEeccCCCCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeE-EEcCCCcEEEE
Q 009698 79 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDGKWRLT 157 (528)
Q Consensus 79 Gs~v~~~~g~~~~~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~-~~~~~g~~~m~ 157 (528)
||.|+-.||++++=-.+..+++...-.+-+|.|. .+|+=.. +.....++||.|+ | ++|+-.|+
T Consensus 263 GSGI~medGTLVFPv~a~~~~g~~vslIiYS~d~-----g~W~ls~---------g~s~~gC~~P~I~EW--e~gkLlM~ 326 (780)
T PTZ00334 263 GSGVQMKDGTLVFPVEGTKKDGKAVSLIIYSSAT-----ESGNLSK---------GMSADGCSDPSVVEW--KEGKLMMM 326 (780)
T ss_pred cCeEEecCCeEEEEEEEEcCCCCEEEEEEEecCC-----CCeEEcC---------CCCCCCCCCCEEEEE--cCCeEEEE
Confidence 4445557898775444544344445567788875 3585321 1122467999987 4 35777775
Q ss_pred EEeecCCeeEEEEEEcCC-CCCCeec
Q 009698 158 IGSKIGKTGISLVYQTTD-FKTYELL 182 (528)
Q Consensus 158 ~g~~~~~~G~i~ly~S~D-L~~W~~~ 182 (528)
. ++.+ |+-.+|+|.| ...|+..
T Consensus 327 t-~C~d--G~RrVYES~DmG~tWtEA 349 (780)
T PTZ00334 327 T-ACDD--GRRRVYESGDKGDSWTEA 349 (780)
T ss_pred E-EeCC--CCEEEEEECCCCCChhhC
Confidence 4 3332 4445899988 5889863
No 84
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=77.26 E-value=10 Score=39.00 Aligned_cols=96 Identities=18% Similarity=0.315 Sum_probs=54.3
Q ss_pred EccCCeEEEEeccCCCCC-------cceEEEEEEcCCCCCccceEEEcCCCceecCC---CCCCCCCccCCeeEEEcCCC
Q 009698 83 ILPDGQIVMLYTGSTDKS-------VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP---RHIGPKDFRDPTTAWAGPDG 152 (528)
Q Consensus 83 ~~~~g~~~~~YTg~~~~~-------~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~---~~~~~~~~RDP~V~~~~~~g 152 (528)
|..+|+.||.|..+..-. .....||+|+|.+ .+|++.+ ..+-.+. ++............+. ..+
T Consensus 101 I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G----~tW~~~~-~~~~~~~~~~~g~~~~~~~fq~~a~~-~~d 174 (316)
T PF13810_consen 101 ISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNG----ETWTVVP-GTIRPNSPFHPGFNQGNWNFQMAAFV-KDD 174 (316)
T ss_pred EEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCC----CCceeCC-CcccccccccCCcccccccccccccc-CCC
Confidence 356899999998764311 2256899999976 8999874 2222221 1211000111112122 355
Q ss_pred cEEEEEEeecCCeeEEEEEEc-----CCCCCCeeccc
Q 009698 153 KWRLTIGSKIGKTGISLVYQT-----TDFKTYELLDE 184 (528)
Q Consensus 153 ~~~m~~g~~~~~~G~i~ly~S-----~DL~~W~~~~~ 184 (528)
.|+-++|......|.+.|++- .|+..|+|-..
T Consensus 175 gyVYv~gt~~~R~g~~~LaRV~~~~i~d~~ayeyw~g 211 (316)
T PF13810_consen 175 GYVYVYGTPFGRNGGVYLARVPPDDILDRSAYEYWDG 211 (316)
T ss_pred CEEEEEeCCCCCCCcEEEEEeCHHHCCChhhccccCC
Confidence 677777765444566778875 35666776543
No 85
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=75.54 E-value=83 Score=33.71 Aligned_cols=127 Identities=17% Similarity=0.142 Sum_probs=79.8
Q ss_pred CCEEEEEeeeCCCC-CCCC-----CceEEEEEeCC----cccceecccccCCCCCCCC-------CcEEEeeEEEc-cCC
Q 009698 26 KGWYHLFYQYNPDS-AVWG-----NITWGHAVSAD----LIHWLYLPIAMVPDQWYDI-------NGVWTGSATIL-PDG 87 (528)
Q Consensus 26 ~G~yHlfyq~~p~~-~~~g-----~~~wgha~S~D----lv~W~~~p~al~p~~~~d~-------~gv~sGs~v~~-~~g 87 (528)
+|+..|||-....+ .... ...-|++.+.| +-.|+.+-+.+.||..+-+ ...-.+.++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999873331 1111 14556777777 4467777777888874322 23557888765 489
Q ss_pred eEEEEeccCCCC--------C------------------------cceEEEEEEcCCCCCccceEEEcCCCceecCCCCC
Q 009698 88 QIVMLYTGSTDK--------S------------------------VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHI 135 (528)
Q Consensus 88 ~~~~~YTg~~~~--------~------------------------~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~ 135 (528)
+.||+|.|++.. . ...++||...+.. +..|+-+ .|+|... +.
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~--~PL~~a~-~v 296 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELL--PPLLSAN-GV 296 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEE--EEEEEET-TT
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEe--Ccceecc-cc
Confidence 999999987521 0 1257888887642 2568877 5888742 11
Q ss_pred CCCCccCCeeEEEcCCCcEEEEEEee
Q 009698 136 GPKDFRDPTTAWAGPDGKWRLTIGSK 161 (528)
Q Consensus 136 ~~~~~RDP~V~~~~~~g~~~m~~g~~ 161 (528)
.....=|.|++ .+|+|||+..++
T Consensus 297 -~de~ERP~iv~--~~gkyYLFt~s~ 319 (428)
T PF02435_consen 297 -NDELERPHIVF--MNGKYYLFTISH 319 (428)
T ss_dssp -BS-EEEEEEEE--ETTEEEEEEEEE
T ss_pred -cccccCCcEEE--ECCEEEEEEEec
Confidence 23445689864 589999998876
No 86
>PF00337 Gal-bind_lectin: Galactoside-binding lectin; InterPro: IPR001079 Galectins (also known as galaptins or S-lectin) are a family of proteins defined by having at least one characteristic carbohydrate recognition domain (CRD) with an affinity for beta-galactosides and sharing certain sequence elements. Members of the galectins family are found in mammals, birds, amphibians, fish, nematodes, sponges, and some fungi. Galectins are known to carry out intra- and extracellular functions through glycoconjugate-mediated recogntion. From the cytosol they may be secreted by non-classical pathways, but they may also be targeted to the nucleus or specific sub-cytosolic sites. Within the same peptide chain some galectins have a CRD with only a few additional amino acids, whereas others have two CRDs joined by a link peptide, and one (galectin-3) has one CRD joined to a different type of domain [, ]. The galectin carbohydrate recognition domain (CRD) is a beta-sandwich of about 135 amino acid. The two sheets are slightly bent with 6 strands forming the concave side and 5 strands forming the convex side. The concave side forms a groove in which carbohydrate is bound, and which is long enough to hold about a linear tetrasaccharide [, ].; GO: 0005529 sugar binding; PDB: 2WSU_B 2WT0_A 2WT1_A 2WT2_B 2WSV_A 1HLC_A 2ZGQ_A 3M3Q_B 1WW5_C 3M3E_A ....
Probab=56.56 E-value=60 Score=28.37 Aligned_cols=30 Identities=20% Similarity=0.432 Sum_probs=23.7
Q ss_pred eeecCCeEEEEEEEeCCeEEEEEeCCceEEE
Q 009698 450 PVLQGEKLSMRILVDHSIVESFGQGGRTVIT 480 (528)
Q Consensus 450 ~~~~~~~~~LrIfvD~S~iEVF~N~G~~~~T 480 (528)
|...++..+|+|.+.....+|++|| ....+
T Consensus 78 pf~~g~~F~i~I~~~~~~f~I~vng-~~~~~ 107 (133)
T PF00337_consen 78 PFQPGQPFEIRIRVEEDGFKIYVNG-KHFCS 107 (133)
T ss_dssp SSTTTSEEEEEEEEESSEEEEEETT-EEEEE
T ss_pred eecCCceEEEEEEEecCeeEEEECC-eEEEE
Confidence 4445778999999999999999995 55433
No 87
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=52.82 E-value=2.4e+02 Score=27.91 Aligned_cols=140 Identities=11% Similarity=0.212 Sum_probs=71.6
Q ss_pred ceeEEE--CCEEEEEeeeCCCCCCCCCceEEEEEeCCccc---ceecccccCCCCC-CCCCcEEEeeEEEccCCeEEEEe
Q 009698 20 AGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIH---WLYLPIAMVPDQW-YDINGVWTGSATILPDGQIVMLY 93 (528)
Q Consensus 20 ng~~~~--~G~yHlfyq~~p~~~~~g~~~wgha~S~Dlv~---W~~~p~al~p~~~-~d~~gv~sGs~v~~~~g~~~~~Y 93 (528)
.-++|+ +..|.|.||+.|. .....||+|.-+ |.. |-.|..+.- -...|...-.+| -++-..|||+
T Consensus 79 P~vFYFaPk~~W~L~yQwg~~-------~fsY~Ts~DptnpngWSa-pq~lf~g~i~~~~~g~iD~~vI-~D~~n~yLFf 149 (271)
T PF03664_consen 79 PQVFYFAPKNIWYLAYQWGPA-------AFSYSTSSDPTNPNGWSA-PQPLFSGSISGSGTGPIDQWVI-CDDTNMYLFF 149 (271)
T ss_pred ceEEEecCCcEEEEEEecCCC-------cceeecCCCCCCCccCCC-CcccccccccCCCCCceeeEEE-ecCCceEEEE
Confidence 356776 7999999997542 356889998753 764 223333221 112233444443 2455689999
Q ss_pred ccCCCCCcceEEEEEEcCCCCCccceEEEc-CCCcee--cCCCCCCCCCccCCeeEEEc-CCCcEEEEEEeecCCeeE-E
Q 009698 94 TGSTDKSVQVQNLAYPADPSDPLLLDWVKY-PGNPVL--VPPRHIGPKDFRDPTTAWAG-PDGKWRLTIGSKIGKTGI-S 168 (528)
Q Consensus 94 Tg~~~~~~~~q~lA~s~D~~d~~l~~w~k~-~~~Pvi--~~~~~~~~~~~RDP~V~~~~-~~g~~~m~~g~~~~~~G~-i 168 (528)
++-.. . |-+|.-. +.+|-.. ...+++ ... ...-|.-+.| ++- -.++|+|++=+.. ..|+ .
T Consensus 150 a~DnG-k-----iYRs~~~----i~nFP~~fgs~~~vvmsd~---~~nLFEA~~V-Ykv~G~~~YLmiVEaiG-s~gRyF 214 (271)
T PF03664_consen 150 AGDNG-K-----IYRSSMP----IGNFPGGFGSSYTVVMSDT---RNNLFEAVQV-YKVKGQNQYLMIVEAIG-SDGRYF 214 (271)
T ss_pred cCCCC-c-----EEEeccc----hhhCCCCCCCceEEEEecC---ccceeeeeEE-EEEcCCceEEEEEEEec-CCCcEE
Confidence 88542 1 1111110 0122111 112322 222 1234667777 663 3478999986642 2343 2
Q ss_pred EEEEcCCCC-CCeecc
Q 009698 169 LVYQTTDFK-TYELLD 183 (528)
Q Consensus 169 ~ly~S~DL~-~W~~~~ 183 (528)
.-|+|..|- .|+-+.
T Consensus 215 RSfTa~sL~G~Wtp~A 230 (271)
T PF03664_consen 215 RSFTATSLDGPWTPQA 230 (271)
T ss_pred EeeecCCCCCcceecc
Confidence 233456653 576543
No 88
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=40.56 E-value=1.5e+02 Score=32.50 Aligned_cols=117 Identities=15% Similarity=-0.002 Sum_probs=68.3
Q ss_pred eeEEECCEEEEEeeeCCCCCCCCCc-eEEEEEeCCcccceec-ccccCCCC-CCCCCcEEEeeEEEccCCeEEEEeccCC
Q 009698 21 GPLFYKGWYHLFYQYNPDSAVWGNI-TWGHAVSADLIHWLYL-PIAMVPDQ-WYDINGVWTGSATILPDGQIVMLYTGST 97 (528)
Q Consensus 21 g~~~~~G~yHlfyq~~p~~~~~g~~-~wgha~S~Dlv~W~~~-p~al~p~~-~~d~~gv~sGs~v~~~~g~~~~~YTg~~ 97 (528)
..+.++|.--|||-.+-....+.+. .-..|.|+|..+++.. +..|.+-+ .+ ......+=++.+.+|+.+|+--+..
T Consensus 105 SAV~~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~~~~~~~~mlgAq~ 183 (486)
T COG1621 105 SAVVDDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIIDQPEGY-TPHFRDPKVVWDEGGKWWMMLGAQG 183 (486)
T ss_pred eEEEeCCcEEEEEccceeccCCcceeEEEEEEEcCCCceEeccCCceecCCCcc-cccCCCCcccccCCCcEEEEEEEec
Confidence 4555789999999876654444443 6789999999999983 33332222 11 2233455555567788877755443
Q ss_pred CCCcceEEEEEEcCCCCCccceEEEcCCCceecCCCCCCCCCccCCeeE
Q 009698 98 DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 146 (528)
Q Consensus 98 ~~~~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~~~~~RDP~V~ 146 (528)
.+..-.+.+=.|.| |++|+.. .++.... +.....+..|-++
T Consensus 184 ~~~~g~i~lY~S~D-----L~~W~~~--g~~~~~~-~~~gym~ECPdlf 224 (486)
T COG1621 184 EDLKGTILLYESDD-----LKNWQFT--GEFGLEQ-GGLGYMWECPDLF 224 (486)
T ss_pred CCCCceEEEEeCCC-----ccCcEEE--EeeccCC-CceeeEEECCCeE
Confidence 32222344444555 4899886 4444331 1111246777773
No 89
>PF06905 FAIM1: Fas apoptotic inhibitory molecule (FAIM1); InterPro: IPR010695 This family consists of several fas apoptotic inhibitory molecule (FAIM) proteins. FAIM expression is upregulated in B cells by anti-Ig treatment that induces Fas-resistance, and overexpression of FAIM diminishes sensitivity to Fas-mediated apoptosis of B and non-B cell lines. FAIM is highly evolutionarily conserved and is widely expressed in murine tissues, suggesting that FAIM plays an important role in cellular physiology [].; GO: 0043066 negative regulation of apoptosis; PDB: 3MX7_A 2KW1_A 2KD2_A.
Probab=32.58 E-value=45 Score=31.32 Aligned_cols=31 Identities=16% Similarity=0.335 Sum_probs=26.3
Q ss_pred EEEEEEEeCCeEEEEEeCCceEEEEeeecCcc
Q 009698 457 LSMRILVDHSIVESFGQGGRTVITSRIYPTKA 488 (528)
Q Consensus 457 ~~LrIfvD~S~iEVF~N~G~~~~T~rvyp~~~ 488 (528)
.+.||++|+..++||+| |+..=|.+-|.+.+
T Consensus 108 ~~~RIvLdk~t~~vwvn-G~~iet~~eFvd~G 138 (177)
T PF06905_consen 108 QEYRIVLDKDTMDVWVN-GEKIETEGEFVDDG 138 (177)
T ss_dssp EEEEEEEETTTTEEEET-TCEE--EEEEETTC
T ss_pred CEEEEEEEcceEEEEEC-CEEccccceecCCC
Confidence 68999999999999999 78899999998865
No 90
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=30.94 E-value=2.4e+02 Score=24.55 Aligned_cols=30 Identities=23% Similarity=0.453 Sum_probs=23.7
Q ss_pred eeecCCeEEEEEEEeCCeEEEEEeCCceEEE
Q 009698 450 PVLQGEKLSMRILVDHSIVESFGQGGRTVIT 480 (528)
Q Consensus 450 ~~~~~~~~~LrIfvD~S~iEVF~N~G~~~~T 480 (528)
|+..+...+|.|.+.....+||+|+ ....+
T Consensus 72 Pf~~g~~F~l~i~~~~~~f~i~vng-~~~~~ 101 (128)
T smart00276 72 PFQPGQPFDLTIIVQPDHFQIFVNG-VHITT 101 (128)
T ss_pred CCCCCCEEEEEEEEcCCEEEEEECC-EeEEE
Confidence 4444678999999999999999995 55443
No 91
>PF02012 BNR: BNR/Asp-box repeat; InterPro: IPR002860 Members of this entry contain multiple BNR (bacterial neuraminidase repeat) repeats or Asp-boxes. The repeats are short, however the repeats are never found closer than 40 residues together suggesting that the repeat is structurally longer. These repeats are found in a variety of non-homologous proteins, including bacterial ribonucleases, sulphite oxidases, reelin, netrins, sialidases, neuraminidases, some lipoprotein receptors, and a variety of glycosyl hydrolases [].; PDB: 2JKB_A 2VW0_A 2VW2_A 2VW1_A 2CN2_D 2CN3_B 2VK7_B 2VK5_A 2VK6_A 2BF6_A ....
Probab=30.82 E-value=40 Score=17.24 Aligned_cols=11 Identities=36% Similarity=0.785 Sum_probs=7.0
Q ss_pred EEcCCCCCccceEEE
Q 009698 108 YPADPSDPLLLDWVK 122 (528)
Q Consensus 108 ~s~D~~d~~l~~w~k 122 (528)
+|+|+| .+|++
T Consensus 2 ~S~D~G----~TW~~ 12 (12)
T PF02012_consen 2 YSTDGG----KTWKK 12 (12)
T ss_dssp EESSTT----SS-EE
T ss_pred EeCCCc----ccCcC
Confidence 577776 88874
No 92
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=26.97 E-value=2.2e+02 Score=31.14 Aligned_cols=91 Identities=13% Similarity=0.188 Sum_probs=53.4
Q ss_pred cCCeEEEEeccCCCCC---cceEEEEEEcCCCCCccceEEEcCCCceecCCCCCC-CCCccCCeeEEEcCCCcEEEEEEe
Q 009698 85 PDGQIVMLYTGSTDKS---VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIG-PKDFRDPTTAWAGPDGKWRLTIGS 160 (528)
Q Consensus 85 ~~g~~~~~YTg~~~~~---~~~q~lA~s~D~~d~~l~~w~k~~~~Pvi~~~~~~~-~~~~RDP~V~~~~~~g~~~m~~g~ 160 (528)
.+|.|+|||-=+.++. ...=+.|+|+|. ++|+.++ |-|.|...++ ..-|---.++ .++|.=.|++.+
T Consensus 68 ykG~yHLFyQyNP~gavwg~ivWGHavSkDL-----inW~~lp--~Ai~Ps~~~ding~wSGSati--~~~~~~vilytg 138 (571)
T KOG0228|consen 68 YKGKYHLFYQYNPKGAVWGNIVWGHAVSKDL-----INWEALP--PAIAPSEWFDINGCWSGSATI--DPNNSPVILYTG 138 (571)
T ss_pred cCcEEEEEEecCCCCceeeeeEeeeecchhh-----ccccccC--cccCCCCccccCccccceEEE--ccCCCeEEEecc
Confidence 5899999997665431 244478999994 9999873 5555432111 1123333332 366777777665
Q ss_pred ecCCeeEEEEEEc-C-----CCCCCeeccc
Q 009698 161 KIGKTGISLVYQT-T-----DFKTYELLDE 184 (528)
Q Consensus 161 ~~~~~G~i~ly~S-~-----DL~~W~~~~~ 184 (528)
-.....++..|.- . -|+.|...+.
T Consensus 139 ~d~~~rqVqn~a~p~d~sdp~l~~w~k~~g 168 (571)
T KOG0228|consen 139 IDPNNRQVQNYAYPKDVSDPQLIAWSKDGG 168 (571)
T ss_pred cCcCceEEEEEeccCCCCchhhheeecCCC
Confidence 4333456666742 1 2567876553
No 93
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function.; PDB: 3IMM_B 3NMB_A 3S5Q_A 3OSD_A 3HBK_A 3H3L_A 3U1X_A.
Probab=26.00 E-value=4.3e+02 Score=23.95 Aligned_cols=29 Identities=24% Similarity=0.347 Sum_probs=24.4
Q ss_pred cCCeEEEEEEEeCCeEEEEEeCCceEEEEe
Q 009698 453 QGEKLSMRILVDHSIVESFGQGGRTVITSR 482 (528)
Q Consensus 453 ~~~~~~LrIfvD~S~iEVF~N~G~~~~T~r 482 (528)
.++=.+++|.+....|.||+| |+.+++..
T Consensus 126 ~~~W~~~~I~~~g~~i~v~vn-G~~v~~~~ 154 (185)
T PF06439_consen 126 PGEWNTVRIVVKGNRITVWVN-GKPVADFT 154 (185)
T ss_dssp TTSEEEEEEEEETTEEEEEET-TEEEEEEE
T ss_pred CCceEEEEEEEECCEEEEEEC-CEEEEEEE
Confidence 367789999999999999999 57776665
No 94
>cd00070 GLECT Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation.
Probab=25.54 E-value=1.1e+02 Score=26.56 Aligned_cols=30 Identities=23% Similarity=0.497 Sum_probs=23.7
Q ss_pred EeeecCCeEEEEEEEeCCeEEEEEeCCceEE
Q 009698 449 VPVLQGEKLSMRILVDHSIVESFGQGGRTVI 479 (528)
Q Consensus 449 ~~~~~~~~~~LrIfvD~S~iEVF~N~G~~~~ 479 (528)
.|+..+...+|+|.++....+||+|+ ....
T Consensus 72 ~pf~~g~~F~l~i~~~~~~f~i~vng-~~~~ 101 (127)
T cd00070 72 FPFQPGQPFELTILVEEDKFQIFVNG-QHFF 101 (127)
T ss_pred CCCCCCCeEEEEEEEcCCEEEEEECC-EeEE
Confidence 34445778999999999999999995 5443
Done!