Query 009704
Match_columns 528
No_of_seqs 456 out of 1956
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 11:10:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009704.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009704hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 4E-23 1.4E-27 192.7 16.2 138 10-148 6-150 (169)
2 4b93_B Ankyrin repeat domain-c 99.9 7.7E-24 2.6E-28 211.3 11.8 142 1-143 79-227 (269)
3 2rfm_A Putative ankyrin repeat 99.9 8.9E-23 3E-27 191.0 13.9 146 2-148 29-181 (192)
4 4gpm_A Engineered protein OR26 99.9 2.4E-22 8.2E-27 187.4 14.4 128 1-129 30-164 (169)
5 1yyh_A HN1;, notch 1, ankyrin 99.9 8.7E-22 3E-26 192.7 17.1 146 4-150 86-239 (253)
6 3hra_A Ankyrin repeat family p 99.9 1.1E-21 3.6E-26 183.8 16.0 147 1-148 32-192 (201)
7 1awc_B Protein (GA binding pro 99.9 1.1E-21 3.7E-26 177.2 14.5 140 8-148 2-147 (153)
8 4hbd_A KN motif and ankyrin re 99.9 6.7E-22 2.3E-26 197.3 14.3 148 1-149 104-265 (276)
9 1oy3_D Transcription factor in 99.9 9.4E-22 3.2E-26 192.9 14.8 85 60-145 151-236 (282)
10 3v31_A Ankyrin repeat family A 99.9 2.1E-21 7.1E-26 177.4 15.1 142 7-149 2-150 (167)
11 2f8y_A Notch homolog 1, transl 99.9 7.6E-21 2.6E-25 180.9 17.3 144 4-148 21-172 (223)
12 1d9s_A Cyclin-dependent kinase 99.9 1.1E-21 3.8E-26 174.1 10.6 120 1-148 5-125 (136)
13 2rfa_A Transient receptor pote 99.9 5E-21 1.7E-25 183.6 15.7 145 2-146 31-209 (232)
14 3aji_A 26S proteasome non-ATPa 99.9 4.3E-21 1.5E-25 183.6 15.1 146 2-148 34-186 (231)
15 2dzn_A Probable 26S proteasome 99.9 1.7E-21 5.8E-26 185.7 12.2 147 2-149 30-189 (228)
16 1ikn_D Protein (I-kappa-B-alph 99.9 1.2E-21 4.2E-26 188.8 11.1 147 1-148 38-198 (236)
17 3aji_A 26S proteasome non-ATPa 99.9 7.5E-21 2.6E-25 181.9 16.2 136 8-144 6-149 (231)
18 2y1l_E Darpin-8.4; hydrolase-i 99.9 6.2E-21 2.1E-25 175.3 15.0 143 5-148 11-160 (169)
19 2etb_A Transient receptor pote 99.9 1.3E-21 4.4E-26 191.0 10.9 145 4-149 39-236 (256)
20 2xai_A ASB-9, ankyrin repeat a 99.9 2.4E-21 8.2E-26 190.7 12.9 145 1-148 29-180 (261)
21 3c5r_A BARD-1, BRCA1-associate 99.9 1.9E-21 6.5E-26 172.3 10.9 120 3-149 5-124 (137)
22 2dzn_A Probable 26S proteasome 99.9 9.6E-21 3.3E-25 180.5 16.2 139 8-147 2-153 (228)
23 1yyh_A HN1;, notch 1, ankyrin 99.8 6.7E-21 2.3E-25 186.4 15.3 145 3-148 52-204 (253)
24 1oy3_D Transcription factor in 99.8 5E-21 1.7E-25 187.8 14.4 147 1-148 2-206 (282)
25 3v30_A DNA-binding protein rfx 99.8 3.3E-21 1.1E-25 176.8 12.2 142 8-150 2-151 (172)
26 1sw6_A Regulatory protein SWI6 99.8 1.9E-21 6.5E-26 198.7 11.5 142 1-143 123-325 (327)
27 1bi7_B P16INK4A, MTS1, multipl 99.8 1.5E-21 5.3E-26 177.2 9.2 137 2-140 6-150 (156)
28 1s70_B 130 kDa myosin-binding 99.8 5.6E-21 1.9E-25 189.9 14.0 141 2-142 67-273 (299)
29 1k1a_A B-cell lymphoma 3-encod 99.8 1.8E-20 6.1E-25 179.9 17.0 144 2-146 40-195 (241)
30 2f8y_A Notch homolog 1, transl 99.8 2E-20 6.9E-25 178.0 17.0 147 1-148 51-205 (223)
31 2rfa_A Transient receptor pote 99.8 1.4E-20 4.7E-25 180.5 15.5 142 7-149 2-169 (232)
32 3v30_A DNA-binding protein rfx 99.8 1.1E-20 3.9E-25 173.3 14.1 136 1-137 29-171 (172)
33 3b7b_A Euchromatic histone-lys 99.8 7.1E-21 2.4E-25 182.8 13.2 148 1-149 37-192 (237)
34 3aaa_C Myotrophin, protein V-1 99.8 4.7E-21 1.6E-25 166.9 10.9 115 4-145 3-117 (123)
35 1ihb_A P18-INK4C(INK6), cyclin 99.8 8.6E-21 2.9E-25 171.8 12.6 141 6-148 3-151 (162)
36 2xai_A ASB-9, ankyrin repeat a 99.8 2.5E-20 8.4E-25 183.4 16.8 140 7-148 2-148 (261)
37 1k1a_A B-cell lymphoma 3-encod 99.8 8.1E-21 2.8E-25 182.3 13.1 149 1-149 72-231 (241)
38 3b7b_A Euchromatic histone-lys 99.8 3.3E-20 1.1E-24 178.1 16.2 147 1-148 4-158 (237)
39 3d9h_A CDNA FLJ77766, highly s 99.8 1.3E-20 4.5E-25 188.4 13.8 146 1-149 85-237 (285)
40 3f6q_A Integrin-linked protein 99.8 1.5E-20 5.3E-25 174.0 12.8 140 6-146 3-150 (179)
41 2jab_A H10-2-G3; HER2, darpin, 99.8 1.6E-20 5.6E-25 166.6 12.0 117 5-148 11-127 (136)
42 1ycs_B 53BP2, P53BP2; ankyrin 99.8 3.7E-21 1.3E-25 187.3 8.6 136 5-141 2-144 (239)
43 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.9E-20 6.4E-25 168.8 12.3 139 8-149 2-148 (156)
44 3twr_A Tankyrase-2; ankyrin re 99.8 8.7E-21 3E-25 172.9 10.1 139 4-143 4-150 (165)
45 3ljn_A Hypothetical protein; a 99.8 1.8E-20 6.3E-25 192.4 13.6 146 1-148 46-225 (364)
46 1n11_A Ankyrin; clathrin, BAND 99.8 4.2E-20 1.4E-24 194.2 16.1 144 2-146 239-389 (437)
47 3d9h_A CDNA FLJ77766, highly s 99.8 7.3E-20 2.5E-24 183.0 16.3 145 2-148 53-204 (285)
48 3utm_A Tankyrase-1; tankyrase, 99.8 1E-19 3.4E-24 183.5 17.4 95 1-96 51-152 (351)
49 1n0q_A 3ANK, 3 ankyrin repeats 99.8 4.9E-20 1.7E-24 153.0 12.4 93 7-126 1-93 (93)
50 3jxi_A Vanilloid receptor-rela 99.8 9.5E-21 3.3E-25 185.0 8.9 144 5-149 43-240 (260)
51 3kea_A K1L; tropism, ANK repea 99.8 1.6E-20 5.6E-25 187.9 10.7 145 1-148 24-175 (285)
52 2etb_A Transient receptor pote 99.8 5.2E-20 1.8E-24 179.6 13.6 136 7-143 1-181 (256)
53 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.3E-19 4.4E-24 156.2 14.2 114 7-147 1-114 (126)
54 3utm_A Tankyrase-1; tankyrase, 99.8 7.8E-20 2.7E-24 184.3 14.8 84 57-141 237-320 (351)
55 1wdy_A 2-5A-dependent ribonucl 99.8 3E-19 1E-23 174.3 17.4 143 2-145 66-230 (285)
56 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.1E-19 3.9E-24 164.4 12.7 124 1-126 31-162 (162)
57 2pnn_A Transient receptor pote 99.8 5.5E-20 1.9E-24 181.4 11.4 145 4-148 50-247 (273)
58 3v31_A Ankyrin repeat family A 99.8 1.5E-19 5.2E-24 164.9 13.6 126 1-127 29-161 (167)
59 1n11_A Ankyrin; clathrin, BAND 99.8 1.6E-19 5.6E-24 189.6 15.3 147 1-148 7-160 (437)
60 2y1l_E Darpin-8.4; hydrolase-i 99.8 2.3E-19 7.9E-24 164.7 14.4 123 1-124 40-169 (169)
61 3ljn_A Hypothetical protein; a 99.8 6.8E-20 2.3E-24 188.2 11.7 145 2-149 14-188 (364)
62 1ikn_D Protein (I-kappa-B-alph 99.8 2.9E-20 1E-24 179.2 8.4 146 2-148 2-165 (236)
63 2l6b_A NR1C; ankyrin, consensu 99.8 4.7E-20 1.6E-24 158.4 8.8 109 3-138 4-112 (115)
64 3ehr_A Osteoclast-stimulating 99.8 2.4E-20 8.1E-25 178.7 7.2 118 4-148 69-187 (222)
65 2fo1_E LIN-12 protein; beta-ba 99.8 2.1E-19 7.2E-24 186.6 14.8 147 1-148 159-327 (373)
66 2rfm_A Putative ankyrin repeat 99.8 3.3E-19 1.1E-23 166.6 14.5 123 1-124 61-190 (192)
67 1s70_B 130 kDa myosin-binding 99.8 2E-19 6.9E-24 178.6 13.8 143 5-148 37-246 (299)
68 4b93_B Ankyrin repeat domain-c 99.8 1.6E-19 5.5E-24 180.0 12.4 146 2-148 46-199 (269)
69 3deo_A Signal recognition part 99.8 1.2E-19 4.2E-24 169.2 9.6 112 5-144 41-153 (183)
70 1wdy_A 2-5A-dependent ribonucl 99.8 1.1E-18 3.7E-23 170.4 16.6 144 2-146 32-194 (285)
71 3t8k_A Uncharacterized protein 99.8 3.3E-20 1.1E-24 175.4 5.2 139 9-148 7-168 (186)
72 2pnn_A Transient receptor pote 99.8 1.7E-19 5.8E-24 177.9 10.3 143 2-145 7-195 (273)
73 2fo1_E LIN-12 protein; beta-ba 99.8 3.6E-19 1.2E-23 184.8 12.8 147 1-148 192-360 (373)
74 2vge_A RELA-associated inhibit 99.8 7.6E-19 2.6E-23 170.8 14.3 113 2-141 15-128 (229)
75 3twr_A Tankyrase-2; ankyrin re 99.8 3.8E-19 1.3E-23 161.9 10.9 122 2-125 36-164 (165)
76 4g8k_A 2-5A-dependent ribonucl 99.8 9.9E-19 3.4E-23 177.6 15.2 139 3-147 163-314 (337)
77 1awc_B Protein (GA binding pro 99.8 1.2E-18 4E-23 157.2 14.0 116 4-120 30-152 (153)
78 3hra_A Ankyrin repeat family p 99.8 1.4E-18 4.8E-23 162.5 15.0 140 5-145 2-151 (201)
79 3kea_A K1L; tropism, ANK repea 99.8 2.5E-19 8.5E-24 179.3 10.1 140 7-148 61-209 (285)
80 3eu9_A Huntingtin-interacting 99.8 1.9E-18 6.3E-23 164.8 15.6 145 1-145 2-153 (240)
81 3eu9_A Huntingtin-interacting 99.8 1.6E-18 5.4E-23 165.2 14.2 147 1-148 35-191 (240)
82 3jxi_A Vanilloid receptor-rela 99.8 3.8E-19 1.3E-23 173.6 9.8 140 5-145 2-187 (260)
83 3ui2_A Signal recognition part 99.8 2.8E-19 9.7E-24 175.0 8.7 111 5-143 42-153 (244)
84 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.8E-18 6.3E-23 155.7 12.1 120 1-123 29-155 (156)
85 2jab_A H10-2-G3; HER2, darpin, 99.8 2.6E-18 8.9E-23 152.3 12.7 97 1-124 40-136 (136)
86 3f6q_A Integrin-linked protein 99.8 3.3E-18 1.1E-22 158.3 13.5 107 41-148 6-119 (179)
87 4g8k_A 2-5A-dependent ribonucl 99.8 7.6E-18 2.6E-22 171.1 17.1 143 2-145 52-213 (337)
88 1d9s_A Cyclin-dependent kinase 99.8 1.1E-18 3.8E-23 154.7 8.4 98 1-126 38-136 (136)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.7 1.3E-17 4.5E-22 143.4 13.3 99 1-126 28-126 (126)
90 1ycs_B 53BP2, P53BP2; ankyrin 99.7 1.4E-18 4.8E-23 169.0 6.1 128 5-133 34-171 (239)
91 2b0o_E UPLC1; arfgap, structur 99.7 6.2E-18 2.1E-22 171.6 10.9 131 8-145 151-297 (301)
92 1dcq_A PYK2-associated protein 99.7 1.7E-17 5.8E-22 166.3 12.9 98 2-126 163-263 (278)
93 2zgd_A 3 repeat synthetic anky 99.7 1.5E-17 5.1E-22 142.7 10.5 92 2-120 18-109 (110)
94 2vge_A RELA-associated inhibit 99.7 2.4E-18 8.2E-23 167.3 5.5 113 1-140 47-162 (229)
95 4hbd_A KN motif and ankyrin re 99.7 2.3E-17 7.7E-22 164.4 11.0 123 1-124 138-273 (276)
96 3lvq_E ARF-GAP with SH3 domain 99.7 3.8E-17 1.3E-21 176.5 12.3 105 5-142 168-275 (497)
97 1dcq_A PYK2-associated protein 99.7 1.3E-16 4.6E-21 159.8 14.5 119 9-148 131-252 (278)
98 3jue_A Arfgap with coiled-coil 99.7 5.7E-17 2E-21 169.5 12.1 115 7-148 198-315 (368)
99 3ehr_A Osteoclast-stimulating 99.7 3.9E-17 1.3E-21 156.2 6.7 108 1-134 99-206 (222)
100 3lvq_E ARF-GAP with SH3 domain 99.7 1.8E-16 6E-21 171.3 12.6 119 9-148 133-254 (497)
101 3aaa_C Myotrophin, protein V-1 99.7 3.3E-16 1.1E-20 136.1 11.0 83 1-110 33-115 (123)
102 3jue_A Arfgap with coiled-coil 99.6 5.2E-16 1.8E-20 162.3 12.6 99 1-126 226-326 (368)
103 3c5r_A BARD-1, BRCA1-associate 99.6 5.3E-17 1.8E-21 143.6 4.1 98 1-125 36-133 (137)
104 1sw6_A Regulatory protein SWI6 99.6 6.5E-17 2.2E-21 165.0 5.1 137 1-143 45-210 (327)
105 3deo_A Signal recognition part 99.6 7.2E-16 2.5E-20 143.5 11.4 105 1-149 69-174 (183)
106 3t8k_A Uncharacterized protein 99.6 7.2E-17 2.5E-21 152.4 4.3 126 2-128 31-181 (186)
107 3ui2_A Signal recognition part 99.6 6.5E-16 2.2E-20 151.1 11.2 105 1-148 70-174 (244)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.6 1.2E-15 4.2E-20 126.2 10.0 82 67-148 1-82 (93)
109 1bi7_B P16INK4A, MTS1, multipl 99.6 1.5E-15 5.1E-20 137.5 7.8 108 39-148 11-125 (156)
110 2aja_A Ankyrin repeat family p 99.5 2.4E-15 8.2E-20 157.6 3.3 119 5-148 89-213 (376)
111 2zgd_A 3 repeat synthetic anky 99.5 2.2E-14 7.4E-19 122.8 8.7 89 60-149 17-105 (110)
112 2l6b_A NR1C; ankyrin, consensu 99.5 4.6E-14 1.6E-18 120.8 6.7 85 63-148 5-89 (115)
113 2b0o_E UPLC1; arfgap, structur 99.5 9.3E-14 3.2E-18 140.7 10.0 104 44-148 155-273 (301)
114 2aja_A Ankyrin repeat family p 99.4 2E-15 6.9E-20 158.2 -5.8 113 3-147 123-238 (376)
115 3zrh_A Ubiquitin thioesterase 23.5 2E+02 0.0069 29.9 7.9 62 15-89 29-90 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.90 E-value=4e-23 Score=192.69 Aligned_cols=138 Identities=16% Similarity=0.182 Sum_probs=125.5
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHHHcCCHH
Q 009704 10 SPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLRDPI 82 (528)
Q Consensus 10 TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv~~G~~e 82 (528)
++|+.||..|+.++|+.||++|++++..+. +.++++.++..++.+++ |++++.+|. .|+||||+|+..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~-~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhcc-CCCCHHHHHHHcCCHH
Confidence 479999999999999999999999998544 57777777766666544 899999997 9999999999999999
Q ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 83 SAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 83 ~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
++++|+++||+++.+|..|+||||+|+..|+.+++++|+++|++++..+..|+||+++|+.....+
T Consensus 85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~ 150 (169)
T 4gpm_A 85 VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEE 150 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999776443
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.90 E-value=7.7e-24 Score=211.31 Aligned_cols=142 Identities=17% Similarity=0.148 Sum_probs=129.9
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|.+|+||||+||..|+.+++++||+.|++++.... +.++++.++..++.+++ |+++|.+|. .|+||||
T Consensus 79 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~-~g~TpL~ 157 (269)
T 4b93_B 79 VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDL-SGNTPLI 157 (269)
T ss_dssp TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TCCCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCC-CCCCHHH
Confidence 578899999999999999999999999999999987544 56777776666665544 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHH
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASA 143 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l 143 (528)
+||..|+.+++++||++|++++.++..|+||||+|+..|+.+++++|+++|++++..+..|+||+++|+.
T Consensus 158 ~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 158 YACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp HHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCT
T ss_pred HHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999864
No 3
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.89 E-value=8.9e-23 Score=190.99 Aligned_cols=146 Identities=14% Similarity=0.103 Sum_probs=133.5
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHHH
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHL 74 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHl 74 (528)
|.+|.+|.||||+|+..|+.+++++|++.|++++..+ .+.++++.++..++.+++ |++++.+|. .|+||||+
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~ 107 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF-SGKTPLMW 107 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TSCCHHHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHH
Confidence 6789999999999999999999999999999988754 457788777777766655 899999997 99999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 75 AVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 75 Av~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 181 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQE 181 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999876544
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.88 E-value=2.4e-22 Score=187.42 Aligned_cols=128 Identities=18% Similarity=0.231 Sum_probs=113.5
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|.+|.+|.||||+|+..++.+++++|++.|++++..+ .+.|+++.++..++.+++ |+++|.+|. .|+||||
T Consensus 30 vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~-~G~TpLh 108 (169)
T 4gpm_A 30 VNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLH 108 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCC-CCCCHHH
Confidence 57899999999999999999999999999999998854 457888877777776655 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhH
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAW 129 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~ 129 (528)
+||..|+.+++++|+++||+++.+|..|+||||+|+..|+.+++++|+++|+++..
T Consensus 109 ~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 109 HAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred HHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999998763
No 5
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.87 E-value=8.7e-22 Score=192.67 Aligned_cols=146 Identities=20% Similarity=0.190 Sum_probs=82.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCcC-CCCCchhHHHHHHhccccc------cccccccCCCCCCcHHHHH
Q 009704 4 FAKYAHSPVHLAVARRDYAALRRIIATLP-RLSKA-GEVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLA 75 (528)
Q Consensus 4 ~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga-~l~~~-~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlA 75 (528)
.|.+|.||||+|+..|+.+++++|++.++ +++.. ..+.++++.++..++.+++ |++++.+|. .|+||||+|
T Consensus 86 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A 164 (253)
T 1yyh_A 86 QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD-LGKSALHWA 164 (253)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCT-TSCBHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCC-CCCCHHHHH
Confidence 34444444444444444444444444443 33332 1223444444433333332 566666665 666666666
Q ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhhhH
Q 009704 76 VRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFY 150 (528)
Q Consensus 76 v~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~Dfy 150 (528)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|+||+++|+..+..+..
T Consensus 165 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~ 239 (253)
T 1yyh_A 165 AAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV 239 (253)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHH
Confidence 666666666666666666666666666666666666666666666666666666666666666666665555443
No 6
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.87 E-value=1.1e-21 Score=183.83 Aligned_cols=147 Identities=16% Similarity=0.208 Sum_probs=131.2
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc-------cccccccCCCCCCcHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV-------SAVIDRRDVPGRETPL 72 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v-------ga~In~kD~p~G~TPL 72 (528)
+|..|.+|.||||+|+..|+.+++++|+++|++++..+. +.++++.++..++.+++ +++++.+|. .|.|||
T Consensus 32 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L 110 (201)
T 3hra_A 32 VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNR-YGGNAL 110 (201)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCT-TSCCSH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccC-CCCcHH
Confidence 467889999999999999999999999999999987544 56777777777666554 678899997 899999
Q ss_pred HHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCC-----HHHHHHHHHhCCChhHhhhcCCchHHHHHHhhh
Q 009704 73 HLAVRLRDPISAEILMAAG-ADWSLQNENGWSALQEAVCTRE-----ESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 73 HlAv~~G~~e~vklLL~~G-Advn~~n~~G~TpLh~A~~~g~-----~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~ 146 (528)
|+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++ .+++++|+++|++++..+..|.||+++|+..+.
T Consensus 111 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 190 (201)
T 3hra_A 111 IPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGY 190 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC
Confidence 9999999999999999999 9999999999999999999998 899999999999999999999999999998765
Q ss_pred hh
Q 009704 147 RD 148 (528)
Q Consensus 147 ~D 148 (528)
.+
T Consensus 191 ~~ 192 (201)
T 3hra_A 191 TE 192 (201)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 7
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.87 E-value=1.1e-21 Score=177.18 Aligned_cols=140 Identities=14% Similarity=0.044 Sum_probs=128.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHHHcCCH
Q 009704 8 AHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLRDP 81 (528)
Q Consensus 8 G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv~~G~~ 81 (528)
..+|||.|+..|+.+++++|++.|++++....+.++++.++..++.+++ |++++.+|. .|+||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK-VDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT-TCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcChH
Confidence 4689999999999999999999999888766678888888888776655 889999997 899999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 82 ISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 82 e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 147 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNED 147 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999876544
No 8
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.87 E-value=6.7e-22 Score=197.29 Aligned_cols=148 Identities=16% Similarity=0.169 Sum_probs=129.6
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCcCCC-CCchhHHHH-----HHhccccc------cccccccCCCC
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLP-RLSKAGE-VNTEDESLA-----AELQADAV------SAVIDRRDVPG 67 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga-~l~~~~~-~~t~l~~~A-----~~~~~~~v------ga~In~kD~p~ 67 (528)
+|..|.+|.||||+||..|+.+++++||+.|+ +++..+. +.++++.++ ..+..+++ |++++..|. .
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~-~ 182 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQ-A 182 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTT-T
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCC-C
Confidence 47789999999999999999999999999998 8877554 566666555 22333333 778888887 8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH-hCCChhHhhhcCCchHHHHHHhhh
Q 009704 68 RETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIAR-HYQPLAWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 68 G~TPLHlAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~-~g~~i~~~~~~g~tPl~lA~l~~~ 146 (528)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++ .|++++..+..|.||+++|+..+.
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~ 262 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQ 262 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999999 899999999999999999998765
Q ss_pred hhh
Q 009704 147 RDF 149 (528)
Q Consensus 147 ~Df 149 (528)
.+.
T Consensus 263 ~~i 265 (276)
T 4hbd_A 263 SEI 265 (276)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 9
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.87 E-value=9.4e-22 Score=192.93 Aligned_cols=85 Identities=24% Similarity=0.249 Sum_probs=48.9
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchH
Q 009704 60 IDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNE-NGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPR 138 (528)
Q Consensus 60 In~kD~p~G~TPLHlAv~~G~~e~vklLL~~GAdvn~~n~-~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl 138 (528)
++.+|. .|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++..+..|.||+
T Consensus 151 ~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL 229 (282)
T 1oy3_D 151 LEAENY-DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPL 229 (282)
T ss_dssp TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCcCC-CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHH
Confidence 444554 555666666655666666666666666555553 356666666666666666666666665555555556666
Q ss_pred HHHHHhh
Q 009704 139 IVASAAR 145 (528)
Q Consensus 139 ~lA~l~~ 145 (528)
++|+...
T Consensus 230 ~~A~~~~ 236 (282)
T 1oy3_D 230 GSALLRP 236 (282)
T ss_dssp HHHHTSS
T ss_pred HHHHHcC
Confidence 6555443
No 10
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.86 E-value=2.1e-21 Score=177.36 Aligned_cols=142 Identities=20% Similarity=0.050 Sum_probs=128.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHHHcC
Q 009704 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLR 79 (528)
Q Consensus 7 ~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv~~G 79 (528)
.|.||||+|+..|+.+++++|++.+++++..+. +.++++.++..++.+++ |++++..|. .|.||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK-GRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcC
Confidence 589999999999999999999999998887544 56777777777766655 889999997 8999999999999
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhhh
Q 009704 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 80 ~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+.
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~ 150 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSV 150 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998765553
No 11
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.86 E-value=7.6e-21 Score=180.91 Aligned_cols=144 Identities=19% Similarity=0.148 Sum_probs=110.7
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cc-cccccCCCCCCcHHHHH
Q 009704 4 FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SA-VIDRRDVPGRETPLHLA 75 (528)
Q Consensus 4 ~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga-~In~kD~p~G~TPLHlA 75 (528)
.|.+|.||||+||..|+.+++++|+++|++++..+. +.++++.++..++.+++ +. +++..|. .|.||||+|
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A 99 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH-DGTTPLILA 99 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCT-TCCCHHHHH
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCCcHHHHH
Confidence 477888888888888888888888888888876443 45666666666555544 33 6777776 788888888
Q ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 76 VRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 76 v~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 100 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 172 (223)
T 2f8y_A 100 ARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYE 172 (223)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHH
Confidence 8888888888888888888888888888888888888888888888888888877778888888887655443
No 12
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.86 E-value=1.1e-21 Score=174.10 Aligned_cols=120 Identities=17% Similarity=0.146 Sum_probs=106.5
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~ 80 (528)
+|..|..|.||||+|+..|+.+++++|+++| ++++.+|. .|+||||+|+. |+
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~~-~~ 56 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAG--------------------------ADPNALNR-FGRRPIQVMMM-GS 56 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTCCCT-TCCTTTTTSTT-SC
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcC--------------------------CCcCCcCC-CCCCHHHHHHc-CC
Confidence 5788999999999999999999999999985 45667776 89999999999 99
Q ss_pred HHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 81 PISAEILMAAGADWSLQNEN-GWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 81 ~e~vklLL~~GAdvn~~n~~-G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 57 ~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 125 (136)
T 1d9s_A 57 AQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRD 125 (136)
T ss_dssp HHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999988 899999999999999999999999999888889999999988765433
No 13
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.85 E-value=5e-21 Score=183.57 Aligned_cols=145 Identities=17% Similarity=0.121 Sum_probs=79.6
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC-----c-CCCCCchhHHHHHHhccccc------cccccccCC----
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLS-----K-AGEVNTEDESLAAELQADAV------SAVIDRRDV---- 65 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~-----~-~~~~~t~l~~~A~~~~~~~v------ga~In~kD~---- 65 (528)
|..|.+|.||||+|+..|+.+++++|++.|+++. . ...+.++++.++..++.+++ |++++.++.
T Consensus 31 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~ 110 (232)
T 2rfa_A 31 HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVF 110 (232)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGG
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcce
Confidence 4455566666666666666666666666655441 1 11234555544444444333 455544431
Q ss_pred --------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHH----HHHHHhCCCh------
Q 009704 66 --------PGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIA----MIIARHYQPL------ 127 (528)
Q Consensus 66 --------p~G~TPLHlAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv----~lLl~~g~~i------ 127 (528)
..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++ ++|+++|++.
T Consensus 111 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~ 190 (232)
T 2rfa_A 111 HYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLE 190 (232)
T ss_dssp SCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGG
T ss_pred eecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhh
Confidence 0356666666666666666666666666666666666666666666665555 5555555554
Q ss_pred hHhhhcCCchHHHHHHhhh
Q 009704 128 AWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 128 ~~~~~~g~tPl~lA~l~~~ 146 (528)
+..+..|.||+++|+..+.
T Consensus 191 ~~~~~~g~tpl~~A~~~g~ 209 (232)
T 2rfa_A 191 LVPNNQGLTPFKLAGVEGN 209 (232)
T ss_dssp GCCCTTSCCHHHHHHHHTC
T ss_pred ccCCCCCCCHHHHHHHcCC
Confidence 3455556666666655443
No 14
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.85 E-value=4.3e-21 Score=183.61 Aligned_cols=146 Identities=13% Similarity=0.069 Sum_probs=122.7
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHHH
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHL 74 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHl 74 (528)
+..|.+|.||||+|+..|+.+++++|++.|++++..+ .+.++++.++..++.+++ |++++.+|. .|.||||+
T Consensus 34 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~ 112 (231)
T 3aji_A 34 TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQ-NGCTPLHY 112 (231)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHH
T ss_pred hcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCC-CCCCHHHH
Confidence 4568889999999999999999999999988887744 456777777666666554 788888887 88999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 75 AVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 75 Av~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..+
T Consensus 113 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 186 (231)
T 3aji_A 113 AASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVE 186 (231)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHH
Confidence 99999999999999999999998889999999999999999999999999888888888999999888765544
No 15
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.85 E-value=1.7e-21 Score=185.74 Aligned_cols=147 Identities=14% Similarity=0.090 Sum_probs=128.8
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCc----CCCCCchhHHHHHHhccccc------c--ccccccCCCCCC
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSK----AGEVNTEDESLAAELQADAV------S--AVIDRRDVPGRE 69 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~----~~~~~t~l~~~A~~~~~~~v------g--a~In~kD~p~G~ 69 (528)
+..|.+|.||||+|+..|+.+++++|++.|++++. ...+.++++.++..++.+++ | ++++.+|. .|.
T Consensus 30 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~-~g~ 108 (228)
T 2dzn_A 30 LQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITN-QGV 108 (228)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCT-TCC
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCc-CCC
Confidence 35789999999999999999999999999954443 23457888777777766554 5 88899997 899
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC-CChhHhhhcCCchHHHHHHhhhhh
Q 009704 70 TPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHY-QPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 70 TPLHlAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g-~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++| ++++..+..|.||+|+|+.....+
T Consensus 109 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~ 188 (228)
T 2dzn_A 109 TCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGD 188 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999876554
Q ss_pred h
Q 009704 149 F 149 (528)
Q Consensus 149 f 149 (528)
.
T Consensus 189 ~ 189 (228)
T 2dzn_A 189 A 189 (228)
T ss_dssp H
T ss_pred H
Confidence 3
No 16
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.85 E-value=1.2e-21 Score=188.83 Aligned_cols=147 Identities=18% Similarity=0.132 Sum_probs=115.2
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cc------cccccCCCC
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SA------VIDRRDVPG 67 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga------~In~kD~p~ 67 (528)
+|..|.+|.||||+|+..|+.+++++|+++|++++..+ .+.++++.++..++.+++ ++ .++..|. .
T Consensus 38 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~-~ 116 (236)
T 1ikn_D 38 LNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY-N 116 (236)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCT-T
T ss_pred hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCC-C
Confidence 45677888888888888888888888888888887744 356777666666655544 32 2566775 7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhh
Q 009704 68 RETPLHLAVRLRDPISAEILMAAGADWSLQNE-NGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 68 G~TPLHlAv~~G~~e~vklLL~~GAdvn~~n~-~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~ 146 (528)
|.||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+....
T Consensus 117 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 196 (236)
T 1ikn_D 117 GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPS 196 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCc
Confidence 88888888888888888888888888888886 88888888888888888888888888888888888888888876554
Q ss_pred hh
Q 009704 147 RD 148 (528)
Q Consensus 147 ~D 148 (528)
.+
T Consensus 197 ~~ 198 (236)
T 1ikn_D 197 TR 198 (236)
T ss_dssp HH
T ss_pred hH
Confidence 43
No 17
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.85 E-value=7.5e-21 Score=181.89 Aligned_cols=136 Identities=16% Similarity=0.139 Sum_probs=66.9
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCC-Cc-CCCCCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHHHcC
Q 009704 8 AHSPVHLAVARRDYAALRRIIATLPRL-SK-AGEVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLR 79 (528)
Q Consensus 8 G~TPLH~Av~~g~~e~vk~LL~~ga~l-~~-~~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv~~G 79 (528)
+.+|||.|+..|+.++++.|+..++.. +. ...+.++++.++..++.+++ |++++.+|. .|+||||+|+..|
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 84 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD-AGWSPLHIAASAG 84 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHHT
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCC-CCCCHHHHHHHcC
Confidence 445555555555555555555443322 11 12233444444444433332 445555554 4555555555555
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHh
Q 009704 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAA 144 (528)
Q Consensus 80 ~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~ 144 (528)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|.+++..+..|.||+|+|+..
T Consensus 85 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 149 (231)
T 3aji_A 85 XDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAK 149 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence 55555555555555555555555555555555555555555555555555555555555555443
No 18
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.85 E-value=6.2e-21 Score=175.26 Aligned_cols=143 Identities=16% Similarity=0.081 Sum_probs=127.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHHH
Q 009704 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVR 77 (528)
Q Consensus 5 Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv~ 77 (528)
...+.+|||+||..|+.+++++|+++|++++..+. +.++++.++..++.+++ |++++.+|. .|+||||+|+.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 89 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDH-AGMTPLRLAAL 89 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHH
Confidence 45678999999999999999999999999987544 56777777777766655 889999997 89999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 78 LRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 78 ~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 160 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNED 160 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999776544
No 19
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.85 E-value=1.3e-21 Score=191.02 Aligned_cols=145 Identities=14% Similarity=0.042 Sum_probs=129.3
Q ss_pred CCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCcC------------CCCCchhHHHHHHhccccc------cccccc
Q 009704 4 FAKYAHSPVHLAVAR---RDYAALRRIIATLPRLSKA------------GEVNTEDESLAAELQADAV------SAVIDR 62 (528)
Q Consensus 4 ~Dk~G~TPLH~Av~~---g~~e~vk~LL~~ga~l~~~------------~~~~t~l~~~A~~~~~~~v------ga~In~ 62 (528)
.|.+|.||||+||.. |+.+++++||+.|++++.. ..+.+++|.++..++.+++ |++++.
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 118 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 789999999999999 9999999999998876532 3467888888887777655 899999
Q ss_pred cCCCC-------------CCcHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCCcHHHHHHH--cCCHH-------HH
Q 009704 63 RDVPG-------------RETPLHLAVRLRDPISAEILMA---AGADWSLQNENGWSALQEAVC--TREES-------IA 117 (528)
Q Consensus 63 kD~p~-------------G~TPLHlAv~~G~~e~vklLL~---~GAdvn~~n~~G~TpLh~A~~--~g~~e-------iv 117 (528)
+|. . |+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+. .++.+ ++
T Consensus 119 ~~~-~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv 197 (256)
T 2etb_A 119 RAC-GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMY 197 (256)
T ss_dssp CCC-SGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred ccc-cccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHH
Confidence 986 5 9999999999999999999999 999999999999999999999 78888 99
Q ss_pred HHHHHhCCCh-------hHhhhcCCchHHHHHHhhhhhh
Q 009704 118 MIIARHYQPL-------AWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 118 ~lLl~~g~~i-------~~~~~~g~tPl~lA~l~~~~Df 149 (528)
++|+++|+++ +..+..|.||+++|+..+..+.
T Consensus 198 ~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 198 DGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp HHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 9999999999 8899999999999998765543
No 20
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.85 E-value=2.4e-21 Score=190.66 Aligned_cols=145 Identities=12% Similarity=0.070 Sum_probs=126.4
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|.+|.||||+|+..|+.+++++|+++|++++..+ .+.++++.++..++.+++ |++++..+ .|.||||
T Consensus 29 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~g~t~L~ 106 (261)
T 2xai_A 29 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLASPIH 106 (261)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--TTCCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC--CCCCHHH
Confidence 46788999999999999999999999999999998754 457888777777766655 77777654 5999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +..|.||+|+|+.....+
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~ 180 (261)
T 2xai_A 107 EAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEE 180 (261)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHH
T ss_pred HHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999999999999999885 788999999998766544
No 21
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.85 E-value=1.9e-21 Score=172.33 Aligned_cols=120 Identities=14% Similarity=0.075 Sum_probs=110.9
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHH
Q 009704 3 DFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPI 82 (528)
Q Consensus 3 ~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~e 82 (528)
..|.+|.||||+|+..|+.+++++|++.| ++++.+|. .|+||||+|+..|+.+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~~~~~~~ 57 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNG--------------------------SDPNVKDH-AGWTPLHEACNHGHLK 57 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTT--------------------------CCSCCCCT-TSCCHHHHHHHTTCHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCcCCC-CCCCHHHHHHHcCCHH
Confidence 46889999999999999999999999984 45777786 8999999999999999
Q ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhhh
Q 009704 83 SAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 83 ~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|......++
T Consensus 58 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~ 124 (137)
T 3c5r_A 58 VVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSL 124 (137)
T ss_dssp HHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHH
T ss_pred HHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999986655443
No 22
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.85 E-value=9.6e-21 Score=180.51 Aligned_cols=139 Identities=14% Similarity=0.140 Sum_probs=91.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCc--CCCCCchhHHHHHHhccccc------c--ccccc-cCCCCCCcHHHHHH
Q 009704 8 AHSPVHLAVARRDYAALRRIIATLPRLSK--AGEVNTEDESLAAELQADAV------S--AVIDR-RDVPGRETPLHLAV 76 (528)
Q Consensus 8 G~TPLH~Av~~g~~e~vk~LL~~ga~l~~--~~~~~t~l~~~A~~~~~~~v------g--a~In~-kD~p~G~TPLHlAv 76 (528)
|.||||+||..|+.++++.|++.++.+.. ...+.++++.++..++.+++ | .+++. .|. .|+||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~-~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDD-SGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCT-TSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCC-CCCCHHHHHH
Confidence 56777777777777777777776665433 33345666555555554443 4 44444 554 6777777777
Q ss_pred HcCCHHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhh
Q 009704 77 RLRDPISAEILMAAG--ADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIR 147 (528)
Q Consensus 77 ~~G~~e~vklLL~~G--Advn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~ 147 (528)
..|+.+++++|+++| ++++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 153 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL 153 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH
Confidence 777777777777776 66677777777777777777777777777777777777777777777777655433
No 23
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.85 E-value=6.7e-21 Score=186.38 Aligned_cols=145 Identities=19% Similarity=0.143 Sum_probs=130.7
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cc-cccccCCCCCCcHHHH
Q 009704 3 DFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SA-VIDRRDVPGRETPLHL 74 (528)
Q Consensus 3 ~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga-~In~kD~p~G~TPLHl 74 (528)
..|.+|.||||+||..|+.+++++|+++|++++..+ .+.++++.++..++.+++ ++ +++.+|. .|.||||+
T Consensus 52 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~ 130 (253)
T 1yyh_A 52 QTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH-DGTTPLIL 130 (253)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCT-TCCCHHHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCC-CCCcHHHH
Confidence 358899999999999999999999999999998854 457888777777766654 44 8899997 89999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 75 AVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 75 Av~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+
T Consensus 131 A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~ 204 (253)
T 1yyh_A 131 AARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYE 204 (253)
T ss_dssp HHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999776444
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.85 E-value=5e-21 Score=187.75 Aligned_cols=147 Identities=21% Similarity=0.192 Sum_probs=130.2
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCC---CCcC-CCCCchhHHHHHHhccccc------cccccccCCCCCCc
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPR---LSKA-GEVNTEDESLAAELQADAV------SAVIDRRDVPGRET 70 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~---l~~~-~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~T 70 (528)
++..|.+|.||||+||..|+.+++++||+.|++ ++.. ..+.+++|.++..++.+++ |++++.+|. .|+|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAER-GGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCC
Confidence 578999999999999999999999999999887 5553 4467888888887777665 899999997 9999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCC-----------------------------------------------CCCcCCCCCc
Q 009704 71 PLHLAVRLRDPISAEILMAAGAD-----------------------------------------------WSLQNENGWS 103 (528)
Q Consensus 71 PLHlAv~~G~~e~vklLL~~GAd-----------------------------------------------vn~~n~~G~T 103 (528)
|||+|+..|+.+++++|+++|++ ++.++..|+|
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 99999999999999999998866 6778899999
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCChhHhhhc-CCchHHHHHHhhhhh
Q 009704 104 ALQEAVCTREESIAMIIARHYQPLAWAKWC-RRLPRIVASAARIRD 148 (528)
Q Consensus 104 pLh~A~~~g~~eiv~lLl~~g~~i~~~~~~-g~tPl~lA~l~~~~D 148 (528)
|||+|+..|+.+++++|+++|++++..+.. |.||+|+|+.....+
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~ 206 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAAS 206 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHH
Confidence 999999999999999999999999988754 999999999766443
No 25
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.85 E-value=3.3e-21 Score=176.85 Aligned_cols=142 Identities=18% Similarity=0.035 Sum_probs=121.8
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCC-CCcC-CCCCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHHHcC
Q 009704 8 AHSPVHLAVARRDYAALRRIIATLPR-LSKA-GEVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLR 79 (528)
Q Consensus 8 G~TPLH~Av~~g~~e~vk~LL~~ga~-l~~~-~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv~~G 79 (528)
+.||||+|+..|+.++++.|+..++. ++.. ..+.++++.++..++.+++ |++++.+|. .|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAK-ERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcc-cCCCHHHHHHHCC
Confidence 46889999999999999999988776 4543 3456777777766666554 889999997 8999999999999
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhhhH
Q 009704 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFY 150 (528)
Q Consensus 80 ~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~Dfy 150 (528)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+..
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~ 151 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQ 151 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999987655543
No 26
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.85 E-value=1.9e-21 Score=198.66 Aligned_cols=142 Identities=11% Similarity=0.005 Sum_probs=125.0
Q ss_pred CCC-CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhc---cccc-------cccccccCCCCC
Q 009704 1 MED-FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQ---ADAV-------SAVIDRRDVPGR 68 (528)
Q Consensus 1 In~-~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~---~~~v-------ga~In~kD~p~G 68 (528)
+|. .|.+|.||||+||..|+.+++++||++|++++..+ .+.+++|.++..++ .+.+ .++++.+|. .|
T Consensus 123 vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~-~g 201 (327)
T 1sw6_A 123 LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDS-MN 201 (327)
T ss_dssp SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECT-TC
T ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCC-CC
Confidence 456 79999999999999999999999999999998855 45788877777655 2222 478999997 99
Q ss_pred CcHHHHHHH----cCCHHHHHHHHHcCC---------------------------------------------CCCCcCC
Q 009704 69 ETPLHLAVR----LRDPISAEILMAAGA---------------------------------------------DWSLQNE 99 (528)
Q Consensus 69 ~TPLHlAv~----~G~~e~vklLL~~GA---------------------------------------------dvn~~n~ 99 (528)
+||||+|+. .|+.+++++|++.++ +++.+|.
T Consensus 202 ~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~ 281 (327)
T 1sw6_A 202 RTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDS 281 (327)
T ss_dssp CCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCT
T ss_pred CCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCC
Confidence 999999999 899999999998743 5788899
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHH
Q 009704 100 NGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASA 143 (528)
Q Consensus 100 ~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l 143 (528)
.|+||||+|+..|+.+++++|+++|++++..+..|+||+++|+.
T Consensus 282 ~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 282 NGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHh
Confidence 99999999999999999999999999999999999999999863
No 27
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.85 E-value=1.5e-21 Score=177.23 Aligned_cols=137 Identities=15% Similarity=0.002 Sum_probs=104.0
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCCCc-HHH
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRET-PLH 73 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~T-PLH 73 (528)
+..+..|.||||+||..|+.+++++|+++|++++..+. +.+++|. |..++.+++ |++++.+|. .|+| |||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~-A~~~~~~~v~~Ll~~g~~~~~~d~-~g~ttpL~ 83 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQV-MMMGSARVAELLLLHGAEPNCADP-ATLTRPVH 83 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTS-SCTTCHHHHHHHHTTTCCCCCCCT-TTCCCHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH-HHcCCHHHHHHHHHcCCCCCCcCC-CCCcHHHH
Confidence 45678899999999999999999999999999887544 5677665 445555544 889999997 8998 999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHH
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIV 140 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~l 140 (528)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.+|..-
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEG 150 (156)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred HHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999888763
No 28
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.85 E-value=5.6e-21 Score=189.92 Aligned_cols=141 Identities=15% Similarity=0.122 Sum_probs=92.1
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCC---------
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDV--------- 65 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~--------- 65 (528)
|..|.+|.||||+||..|+.+++++|+++|++++..+ .+.+++|.++..++.+++ |++++..|.
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 146 (299)
T 1s70_B 67 NYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIA 146 (299)
T ss_dssp TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHH
Confidence 4556666666666666666666666666666666533 345555555555544433 344333321
Q ss_pred --------------------------------------------------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 009704 66 --------------------------------------------------PGRETPLHLAVRLRDPISAEILMAAGADWS 95 (528)
Q Consensus 66 --------------------------------------------------p~G~TPLHlAv~~G~~e~vklLL~~GAdvn 95 (528)
..|.||||+|+..|+.+++++|+++|++++
T Consensus 147 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~ 226 (299)
T 1s70_B 147 EEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN 226 (299)
T ss_dssp CSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT
T ss_pred HhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence 146677777777777777777777777777
Q ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHH
Q 009704 96 LQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVAS 142 (528)
Q Consensus 96 ~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~ 142 (528)
.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|.
T Consensus 227 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 273 (299)
T 1s70_B 227 IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273 (299)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCC
T ss_pred CcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 77777777777777777777777777777777777777777777764
No 29
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.85 E-value=1.8e-20 Score=179.87 Aligned_cols=144 Identities=19% Similarity=0.217 Sum_probs=88.9
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cc----cccccCCCCCCc
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SA----VIDRRDVPGRET 70 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga----~In~kD~p~G~T 70 (528)
|..|.+|.||||+|+..|+.+++++|++.|++++..+. +.++++.++..++.+++ ++ +++..|. .|.|
T Consensus 40 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-~g~t 118 (241)
T 1k1a_A 40 DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY-DGLT 118 (241)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCT-TSCC
T ss_pred CcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCc-CCCc
Confidence 44556666666666666666666666666666655332 34555544444444333 22 5566665 6666
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhh
Q 009704 71 PLHLAVRLRDPISAEILMAAGADWSLQN-ENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 71 PLHlAv~~G~~e~vklLL~~GAdvn~~n-~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~ 146 (528)
|||+|+..|+.+++++|+++|++++..+ ..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+....
T Consensus 119 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 195 (241)
T 1k1a_A 119 ALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGL 195 (241)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 6666666666666666666666666666 566666666666666666666666666666666666666666665443
No 30
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.85 E-value=2e-20 Score=177.96 Aligned_cols=147 Identities=20% Similarity=0.181 Sum_probs=132.1
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCcC-CCCCchhHHHHHHhccccc------cccccccCCCCCCcHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLP-RLSKA-GEVNTEDESLAAELQADAV------SAVIDRRDVPGRETPL 72 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga-~l~~~-~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPL 72 (528)
++..|.+|.||||+|+..|+.+++++|++.++ .++.. ....++++.++..++.+++ |++++.+|. .|+|||
T Consensus 51 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L 129 (223)
T 2f8y_A 51 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD-LGKSAL 129 (223)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TSCBHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCC-CCCcHH
Confidence 46788999999999999999999999999987 66654 3456777777777766654 899999997 899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 73 HLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 73 HlAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 130 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 205 (223)
T 2f8y_A 130 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHD 205 (223)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999876544
No 31
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.84 E-value=1.4e-20 Score=180.46 Aligned_cols=142 Identities=20% Similarity=0.156 Sum_probs=125.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHc-CCCCCcCC-CCCchhHHHHHHhccccc------cccc-----cccCCCCCCcHHH
Q 009704 7 YAHSPVHLAVARRDYAALRRIIAT-LPRLSKAG-EVNTEDESLAAELQADAV------SAVI-----DRRDVPGRETPLH 73 (528)
Q Consensus 7 ~G~TPLH~Av~~g~~e~vk~LL~~-ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~I-----n~kD~p~G~TPLH 73 (528)
.|.||||+||..|+.+++++||+. |++++..+ .+.++++.++..++.+++ |+++ +.+|. .|+||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELY-EGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTT-TTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCC-CCcCHHH
Confidence 589999999999999999999998 88988754 457888777777766655 6655 66776 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCC-------------CCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHH
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQNE-------------NGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIV 140 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~n~-------------~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~l 140 (528)
+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++..+..|.||+|+
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 160 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHI 160 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 99999999999999999999999876 79999999999999999999999999999999999999999
Q ss_pred HHHhhhhhh
Q 009704 141 ASAARIRDF 149 (528)
Q Consensus 141 A~l~~~~Df 149 (528)
|+.....+.
T Consensus 161 A~~~~~~~~ 169 (232)
T 2rfa_A 161 LILQPNKTF 169 (232)
T ss_dssp HHTCSCHHH
T ss_pred HHHcCChHH
Confidence 998765554
No 32
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.84 E-value=1.1e-20 Score=173.26 Aligned_cols=136 Identities=21% Similarity=0.197 Sum_probs=117.4
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
++..|.+|.||||+|+..|+.+++++|+++|++++..+ .+.+++|.++..++.+++ |++++.+|. .|+||||
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 107 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDW-NGGTPLL 107 (172)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT-TSCCHHH
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC-CCCCHHH
Confidence 35678999999999999999999999999999998854 457777777777666655 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCch
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLP 137 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tP 137 (528)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++....+..+.+|
T Consensus 108 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 108 YAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred HHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999888777777776
No 33
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.84 E-value=7.1e-21 Score=182.79 Aligned_cols=148 Identities=16% Similarity=0.137 Sum_probs=124.8
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------c-ccccccCCCCCCcHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------S-AVIDRRDVPGRETPL 72 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------g-a~In~kD~p~G~TPL 72 (528)
++..|.+|.||||+|+..|+.+++++|+++|++++..+. +.++++.++..++.+++ + ++++..|. .|.|||
T Consensus 37 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L 115 (237)
T 3b7b_A 37 IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD-GGWTPM 115 (237)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCT-TSCCHH
T ss_pred cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-CCCCHH
Confidence 466788899999999999999999999999988877443 56777666666665554 4 77888886 899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhhh
Q 009704 73 HLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 73 HlAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
|+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+.....+.
T Consensus 116 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 192 (237)
T 3b7b_A 116 IWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDC 192 (237)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhH
Confidence 99999999999999999999999999999999999999999999999999999998888889999999987665543
No 34
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=4.7e-21 Score=166.88 Aligned_cols=115 Identities=16% Similarity=0.107 Sum_probs=104.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHH
Q 009704 4 FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPIS 83 (528)
Q Consensus 4 ~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~e~ 83 (528)
.+..|.||||+|+..|+.+++++|++.| ++++.+|. .|+||||+|+..|+.++
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~--------------------------~~~~~~~~-~g~t~L~~A~~~~~~~~ 55 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKG--------------------------EDVNRTLE-GGRKPLHYAADCGQLEI 55 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTSCCT-TSSCHHHHHHHTTCHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcC--------------------------CCcCccCC-CCCcHHHHHHHcCCHHH
Confidence 3567899999999999999999999985 45777786 89999999999999999
Q ss_pred HHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhh
Q 009704 84 AEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAAR 145 (528)
Q Consensus 84 vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~ 145 (528)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|....
T Consensus 56 v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 56 LEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred HHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence 99999999999999999999999999999999999999999999999999999999985443
No 35
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.84 E-value=8.6e-21 Score=171.84 Aligned_cols=141 Identities=14% Similarity=0.053 Sum_probs=123.2
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHHHc
Q 009704 6 KYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRL 78 (528)
Q Consensus 6 k~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv~~ 78 (528)
....||||+|+..|+.+++++|++.|++++..+. +.++++. |..++.+++ |++++.+|. .|+||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~-A~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 80 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQV-MKLGNPEIARRLLLRGANPDLKDR-TGFAVIHDAARA 80 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHH-CCSSCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHH-HHcCcHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHc
Confidence 3467999999999999999999999999987554 4566655 444555544 899999997 999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC-hhHhhhcCCchHHHHHHhhhhh
Q 009704 79 RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP-LAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 79 G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~-i~~~~~~g~tPl~lA~l~~~~D 148 (528)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++..+..|.||+++|+.....+
T Consensus 81 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~ 151 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNE 151 (162)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999998 5888999999999999776544
No 36
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.84 E-value=2.5e-20 Score=183.40 Aligned_cols=140 Identities=16% Similarity=0.056 Sum_probs=124.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHHHcC
Q 009704 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLR 79 (528)
Q Consensus 7 ~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv~~G 79 (528)
+|+||||+||..|+.+++++|++.|++++..+ .+.+++|.++..++.+++ |++++.+|. .|+||||+|+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA-DWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcC
Confidence 68999999999999999999999999998855 467888877777776655 899999997 9999999999999
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 80 ~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+.+++++|+++|++++.. ..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+.....+
T Consensus 81 ~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 148 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA 148 (261)
T ss_dssp CHHHHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHH
T ss_pred CHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHH
Confidence 999999999999999864 46999999999999999999999999999999999999999999765544
No 37
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.84 E-value=8.1e-21 Score=182.26 Aligned_cols=149 Identities=21% Similarity=0.217 Sum_probs=131.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCC----CCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCC
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLP----RLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRE 69 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga----~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~ 69 (528)
++..|.+|.||||+|+..|+.+++++|++.++ +++..+ .+.++++.++..++.+++ |++++..+...|.
T Consensus 72 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 151 (241)
T 1k1a_A 72 PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGR 151 (241)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCC
Confidence 35678999999999999999999999999987 555533 456777777777666654 8899988822899
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhhh
Q 009704 70 TPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 70 TPLHlAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+.
T Consensus 152 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i 231 (241)
T 1k1a_A 152 SPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 231 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987765553
No 38
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.84 E-value=3.3e-20 Score=178.15 Aligned_cols=147 Identities=17% Similarity=0.187 Sum_probs=132.9
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
++..|.+|.||||+||..|+.+++++|+++|++++..+ .+.++++.++..++.+++ |++++.+|. .|.||||
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 82 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDA-EGSTCLH 82 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCT-TSCCHHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCC-CCCcHHH
Confidence 46789999999999999999999999999999998754 456777777777766655 888999997 8999999
Q ss_pred HHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 74 LAVRLRDPISAEILMAAG-ADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~G-Advn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+|+..|+.+++++|+++| ++++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+.....+
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 158 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVD 158 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHH
Confidence 999999999999999999 899999999999999999999999999999999999999999999999999766544
No 39
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.84 E-value=1.3e-20 Score=188.36 Aligned_cols=146 Identities=12% Similarity=0.069 Sum_probs=123.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|.+|.||||+||..|+.+++++|+++|++++..+ .+.++++.++..++.+++ |++++..+ .|.||||
T Consensus 85 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~g~t~L~ 162 (285)
T 3d9h_A 85 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLASPIH 162 (285)
T ss_dssp SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--TTSCHHH
T ss_pred CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC--CCCCHHH
Confidence 46678899999999999999999999999999888744 456777777777766655 77777655 4899999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhhh
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +..|.||+|+|+.....+.
T Consensus 163 ~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~ 237 (285)
T 3d9h_A 163 EAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEEL 237 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999999999999999999998885 7788899999987665443
No 40
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.83 E-value=1.5e-20 Score=174.01 Aligned_cols=140 Identities=19% Similarity=0.111 Sum_probs=120.1
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHc-CCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHHH
Q 009704 6 KYAHSPVHLAVARRDYAALRRIIAT-LPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVR 77 (528)
Q Consensus 6 k~G~TPLH~Av~~g~~e~vk~LL~~-ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv~ 77 (528)
.++.+|||.||..|+.+++++||+. +.+++..+ .+.++++.++..++.+++ |++++.+|. .|+||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNR-GDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHH
Confidence 4578899999999999999999988 44566543 356777777776666554 889999997 99999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhh
Q 009704 78 LRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 78 ~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~ 146 (528)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|.....
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 150 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLR 150 (179)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHH
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999876543
No 41
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.83 E-value=1.6e-20 Score=166.56 Aligned_cols=117 Identities=19% Similarity=0.134 Sum_probs=107.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHHH
Q 009704 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISA 84 (528)
Q Consensus 5 Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~e~v 84 (528)
...|.||||+||..|+.+++++|+++| ++++.+|. .|+||||+|+..|+.+++
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~~~~~~~~v 63 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANG--------------------------ADVNAKDE-YGLTPLYLATAHGHLEIV 63 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcC--------------------------CCCCCcCC-CCCCHHHHHHHcCCHHHH
Confidence 456789999999999999999999985 45677786 899999999999999999
Q ss_pred HHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 85 EILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 85 klLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+
T Consensus 64 ~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~ 127 (136)
T 2jab_A 64 EVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNED 127 (136)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999776544
No 42
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.83 E-value=3.7e-21 Score=187.29 Aligned_cols=136 Identities=13% Similarity=-0.003 Sum_probs=93.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHHHc
Q 009704 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRL 78 (528)
Q Consensus 5 Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv~~ 78 (528)
+..|.||||.|+..++.+.++.||++|++++......++++.++..++.+++ |+++|.+|. .|+||||+||..
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~ 80 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPND-EGITALHNAVCA 80 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCT-TSCCHHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHc
Confidence 4579999999999999999999999999998765567788887777777655 889999997 999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCC-chHHHH
Q 009704 79 RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRR-LPRIVA 141 (528)
Q Consensus 79 G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~-tPl~lA 141 (528)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..+. ||+++|
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHC
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHH
Confidence 999999999999999999999999999999999999999999999999999888877 999988
No 43
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.83 E-value=1.9e-20 Score=168.81 Aligned_cols=139 Identities=19% Similarity=0.147 Sum_probs=122.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHHc-CCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHHHcC
Q 009704 8 AHSPVHLAVARRDYAALRRIIAT-LPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLR 79 (528)
Q Consensus 8 G~TPLH~Av~~g~~e~vk~LL~~-ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv~~G 79 (528)
|.||||+|+..|+.++++.|++. +.+++..+ .+.++++. +..++.+++ |++++.+|. .|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDT-SGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcC
Confidence 46899999999999999999988 22666543 45677777 776666554 899999997 9999999999999
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhhh
Q 009704 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 80 ~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++..+..|.||+++|+..+..+.
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~ 148 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDL 148 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHH
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 99999999999999999999999999999999999999999999 9999999999999999997765443
No 44
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.83 E-value=8.7e-21 Score=172.87 Aligned_cols=139 Identities=18% Similarity=0.141 Sum_probs=120.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCcC-CCCCchhHHHHHHhccccc------cccccccCCCCCCcHHHHH
Q 009704 4 FAKYAHSPVHLAVARRDYAALRRIIATLP-RLSKA-GEVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLA 75 (528)
Q Consensus 4 ~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga-~l~~~-~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlA 75 (528)
.|.+|.||||.|+..|+.++++.|++.+. .++.. ....++++.++..++.+++ |++++.+|. .|+||||+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A 82 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDK-GGLVPLHNA 82 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCC-CCCCHHHHH
Confidence 46778999999999999999999998543 33332 3346777777777766655 889999997 899999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHH
Q 009704 76 VRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASA 143 (528)
Q Consensus 76 v~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l 143 (528)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|..
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT
T ss_pred HHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999654
No 45
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.83 E-value=1.8e-20 Score=192.41 Aligned_cols=146 Identities=15% Similarity=0.055 Sum_probs=108.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccc----------cccccc--------
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV----------SAVIDR-------- 62 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~v----------ga~In~-------- 62 (528)
+|..|.+|.||||+||..|+.+++++||++|++++. ..+.++++.++..++.+++ +++++.
T Consensus 46 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 124 (364)
T 3ljn_A 46 PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL-WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDER 124 (364)
T ss_dssp TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC-BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc-cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchH
Confidence 466788888888888888888888888888875554 2345666665555555443 333333
Q ss_pred ---------cCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC-----
Q 009704 63 ---------RDVPGRETPLHLAVRLR--DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP----- 126 (528)
Q Consensus 63 ---------kD~p~G~TPLHlAv~~G--~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~----- 126 (528)
+|. .|.||||+|+..| +.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 125 ~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 203 (364)
T 3ljn_A 125 EVNEIGSHVKHC-KGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLR 203 (364)
T ss_dssp CEEEETTEEEEE-SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCC
T ss_pred hhhhhccccCCC-CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccc
Confidence 665 6888888888888 88888888888888888888888888888888888888888888777
Q ss_pred hhHhhhcCCchHHHHHHhhhhh
Q 009704 127 LAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 127 i~~~~~~g~tPl~lA~l~~~~D 148 (528)
++..+..|.||+|+|+.....+
T Consensus 204 ~~~~~~~g~t~L~~A~~~g~~~ 225 (364)
T 3ljn_A 204 LDYANKQGNSHLHWAILINWED 225 (364)
T ss_dssp TTCCCTTCCCTTHHHHTTTCHH
T ss_pred ccccCCCCCcHHHHHHHcCCHH
Confidence 7777778888888887665444
No 46
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.83 E-value=4.2e-20 Score=194.17 Aligned_cols=144 Identities=16% Similarity=0.132 Sum_probs=110.1
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHHH
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHL 74 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHl 74 (528)
|..+..|.||||+|+..|+.+++++|+++|++++..+ .+.++++.++..++.+++ |++++.+|. .|+||||+
T Consensus 239 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~ 317 (437)
T 1n11_A 239 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR-MGYTPLHV 317 (437)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCS-SCCCHHHH
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCC-CCCCHHHH
Confidence 4566777777777777777777777777777776643 345666666666655544 777888886 78888888
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhh
Q 009704 75 AVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 75 Av~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~ 146 (528)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|...+.
T Consensus 318 A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~ 389 (437)
T 1n11_A 318 ASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGY 389 (437)
T ss_dssp HHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTC
T ss_pred HHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCc
Confidence 888888888888888888888888888888888888888888888888888888888888888888776543
No 47
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.83 E-value=7.3e-20 Score=182.96 Aligned_cols=145 Identities=16% Similarity=0.043 Sum_probs=130.5
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHHH
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHL 74 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHl 74 (528)
+..|.+|+||||+||..|+.+++++|++.|++++..+ .+.++++.++..++.+++ |++++.+|. .|+||||+
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~ 131 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA-DWHTPLFN 131 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCT-TCCCHHHH
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCC-CCCCHHHH
Confidence 5678999999999999999999999999999998744 467888777777776655 899999997 99999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 75 AVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 75 Av~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
|+..|+.+++++|+++|++++..+ .|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 132 A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 204 (285)
T 3d9h_A 132 ACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA 204 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHH
T ss_pred HHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 999999999999999999998755 4999999999999999999999999999999999999999999876544
No 48
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.82 E-value=1e-19 Score=183.47 Aligned_cols=95 Identities=17% Similarity=0.151 Sum_probs=73.1
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|.+|.||||+||..|+.+++++|+++|++++..+ .+.+++|.++..++.+++ |++++..|. .|.||||
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~-~g~t~L~ 129 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDL-WQFTPLH 129 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHH
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCC-CCCCHHH
Confidence 35677888888888888888888888888888887644 456777776666666554 778888886 7888888
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCC
Q 009704 74 LAVRLRDPISAEILMAAGADWSL 96 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~ 96 (528)
+|+..|+.+++++|+++|++++.
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~ 152 (351)
T 3utm_A 130 EAASKNRVEVCSLLLSHGADPTL 152 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCCcc
Confidence 88888888888887777776554
No 49
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=4.9e-20 Score=152.99 Aligned_cols=93 Identities=24% Similarity=0.345 Sum_probs=86.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHHHHH
Q 009704 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISAEI 86 (528)
Q Consensus 7 ~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~e~vkl 86 (528)
+|+||||+|+..|+.+++++|++.| +++|.+|. .|+||||+|+..|+.+++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g--------------------------~~~n~~d~-~g~t~L~~A~~~~~~~~v~~ 53 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG--------------------------ADVNAKDK-NGRTPLHLAARNGHLEVVKL 53 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCT-TSCCHHHHHHHTTCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC--------------------------CCCcccCC-CCCCHHHHHHHcCCHHHHHH
Confidence 5899999999999999999999984 46778887 89999999999999999999
Q ss_pred HHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Q 009704 87 LMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (528)
Q Consensus 87 LL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~ 126 (528)
|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 54 Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 54 LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999874
No 50
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.82 E-value=9.5e-21 Score=185.00 Aligned_cols=144 Identities=15% Similarity=0.080 Sum_probs=123.8
Q ss_pred CCCCChHHHHHH---HcCCHHHHHHHHHcCCCCC-----------cC-CCCCchhHHHHHHhccccc------ccccccc
Q 009704 5 AKYAHSPVHLAV---ARRDYAALRRIIATLPRLS-----------KA-GEVNTEDESLAAELQADAV------SAVIDRR 63 (528)
Q Consensus 5 Dk~G~TPLH~Av---~~g~~e~vk~LL~~ga~l~-----------~~-~~~~t~l~~~A~~~~~~~v------ga~In~k 63 (528)
|.+|.||||+|+ ..|+.+++++||+.|++.. .. ..+.+++|.++..++.+++ |++++.+
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 477999999999 6799999999999875422 11 2567888888887777655 8999998
Q ss_pred C--------------CCCCCcHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCCcHHHHHHHcCC---------HHHH
Q 009704 64 D--------------VPGRETPLHLAVRLRDPISAEILMA---AGADWSLQNENGWSALQEAVCTRE---------ESIA 117 (528)
Q Consensus 64 D--------------~p~G~TPLHlAv~~G~~e~vklLL~---~GAdvn~~n~~G~TpLh~A~~~g~---------~eiv 117 (528)
| . .|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..++ .+++
T Consensus 123 ~~~~~~~~~~~~~~~~-~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v 201 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFY-FGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMY 201 (260)
T ss_dssp CEECCCSSSCCCCSCC-SCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHH
T ss_pred ccccccCccccccccc-CCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHH
Confidence 8 4 79999999999999999999999 999999999999999999998888 6899
Q ss_pred HHHHHhCCCh-------hHhhhcCCchHHHHHHhhhhhh
Q 009704 118 MIIARHYQPL-------AWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 118 ~lLl~~g~~i-------~~~~~~g~tPl~lA~l~~~~Df 149 (528)
++|+++|+++ +..+..|.||+|+|+..+..+.
T Consensus 202 ~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 240 (260)
T 3jxi_A 202 DLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240 (260)
T ss_dssp HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence 9999999988 6789999999999998765543
No 51
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.82 E-value=1.6e-20 Score=187.86 Aligned_cols=145 Identities=12% Similarity=-0.047 Sum_probs=128.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccc------cccccccCCCCCCcHHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHL 74 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHl 74 (528)
+|..|.+|.||||+|+..|+.+++++|+++|++++..+ +.+++|.++..++.+++ |++++.+|. .|+||||+
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~t~L~~ 101 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE-NEFPLHQAATLEDTKIVKILLFSGLDDSQFDD-KGNTALYY 101 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT-TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCT-TSCCHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCcHHHH
Confidence 47889999999999999999999999999999988763 67888777777776655 899999997 99999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCC-CcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 75 AVRLRDPISAEILMAAGADWSLQNENG-WSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 75 Av~~G~~e~vklLL~~GAdvn~~n~~G-~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
|+..|+.+++++|+++|++++.++..| .||||+|+..|+.+++++|+++|++.... ..|.||+|+|+.....+
T Consensus 102 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~ 175 (285)
T 3kea_A 102 AVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVD 175 (285)
T ss_dssp HHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHH
Confidence 999999999999999999999999999 69999999999999999999999876322 27889999999776544
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.82 E-value=5.2e-20 Score=179.59 Aligned_cols=136 Identities=15% Similarity=0.083 Sum_probs=119.6
Q ss_pred CCChHHHHHHHcCCHH----HHHHHHHcCCCCCc-----CCCCCchhHHHHHH---hccccc------cccccc------
Q 009704 7 YAHSPVHLAVARRDYA----ALRRIIATLPRLSK-----AGEVNTEDESLAAE---LQADAV------SAVIDR------ 62 (528)
Q Consensus 7 ~G~TPLH~Av~~g~~e----~vk~LL~~ga~l~~-----~~~~~t~l~~~A~~---~~~~~v------ga~In~------ 62 (528)
+|+||||+||..|+.+ ++++|++.|++++. ...+.+++|.++.. ++.+++ |++++.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 6899999999999997 66788889999986 45567888888777 666655 555542
Q ss_pred -----cCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-------------CCcHHHHHHHcCCHHHHHHHHH--
Q 009704 63 -----RDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNEN-------------GWSALQEAVCTREESIAMIIAR-- 122 (528)
Q Consensus 63 -----kD~p~G~TPLHlAv~~G~~e~vklLL~~GAdvn~~n~~-------------G~TpLh~A~~~g~~eiv~lLl~-- 122 (528)
+|. .|+||||+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 159 (256)
T 2etb_A 81 AQCTDEFY-QGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP 159 (256)
T ss_dssp CCCCSTTT-TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccc-cCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 345 7999999999999999999999999999999876 9999999999999999999999
Q ss_pred -hCCChhHhhhcCCchHHHHHH
Q 009704 123 -HYQPLAWAKWCRRLPRIVASA 143 (528)
Q Consensus 123 -~g~~i~~~~~~g~tPl~lA~l 143 (528)
+|++++..+..|+||+|+|+.
T Consensus 160 ~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 160 HQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHH
T ss_pred ccCCCcCccCCCCCCHHHHHHH
Confidence 999999999999999999997
No 53
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.82 E-value=1.3e-19 Score=156.15 Aligned_cols=114 Identities=21% Similarity=0.275 Sum_probs=101.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHHHHH
Q 009704 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISAEI 86 (528)
Q Consensus 7 ~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~e~vkl 86 (528)
+|.||||+|+..|+.+++++|+++|+ +++..|. .|.||||+|+..|+.+++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~--------------------------~~~~~~~-~g~t~L~~A~~~~~~~~~~~ 53 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA--------------------------DVNAKDK-NGRTPLHLAARNGHLEVVKL 53 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC--------------------------CTTCCCT-TSCCHHHHHHHHTCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC--------------------------CCCCcCC-CCCcHHHHHHHcCcHHHHHH
Confidence 58999999999999999999999854 4566675 78999999999999999999
Q ss_pred HHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhh
Q 009704 87 LMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIR 147 (528)
Q Consensus 87 LL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~ 147 (528)
|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....
T Consensus 54 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 114 (126)
T 1n0r_A 54 LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 114 (126)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcH
Confidence 9999999999999999999999999999999999999999888888999999998876543
No 54
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.82 E-value=7.8e-20 Score=184.28 Aligned_cols=84 Identities=17% Similarity=0.120 Sum_probs=45.2
Q ss_pred cccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCc
Q 009704 57 SAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRL 136 (528)
Q Consensus 57 ga~In~kD~p~G~TPLHlAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~t 136 (528)
|++++.+|. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.|
T Consensus 237 g~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t 315 (351)
T 3utm_A 237 GANVNEKNK-DFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFT 315 (351)
T ss_dssp TCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCcCCcCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCC
Confidence 444455554 4555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred hHHHH
Q 009704 137 PRIVA 141 (528)
Q Consensus 137 Pl~lA 141 (528)
|++++
T Consensus 316 al~~a 320 (351)
T 3utm_A 316 AAQMG 320 (351)
T ss_dssp HHHHS
T ss_pred hhhhh
Confidence 55554
No 55
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.81 E-value=3e-19 Score=174.33 Aligned_cols=143 Identities=20% Similarity=0.146 Sum_probs=76.1
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------ccccccc----------C
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRR----------D 64 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~k----------D 64 (528)
+..|.+|.||||+|+..|+.+++++|+++|++++..+. +.++++.++..++.+++ |++++.. +
T Consensus 66 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~ 145 (285)
T 1wdy_A 66 VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLR 145 (285)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTT
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhc
Confidence 34555566666666666666666666666655554322 34444444444433332 4444443 3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCC----HHHHHHHHHhCCChhHhhhcCCchHH
Q 009704 65 VPGRETPLHLAVRLRDPISAEILMAA-GADWSLQNENGWSALQEAVCTRE----ESIAMIIARHYQPLAWAKWCRRLPRI 139 (528)
Q Consensus 65 ~p~G~TPLHlAv~~G~~e~vklLL~~-GAdvn~~n~~G~TpLh~A~~~g~----~eiv~lLl~~g~~i~~~~~~g~tPl~ 139 (528)
. .|.||||+|+..|+.+++++|+++ |++++..|..|+||||.|+..++ .+++++|+++|++++..+..|.||+|
T Consensus 146 ~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~ 224 (285)
T 1wdy_A 146 K-GGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI 224 (285)
T ss_dssp C-CCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHH
T ss_pred c-CCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 3 455555555555555555555554 55555555555555555555555 55555555555555555555555555
Q ss_pred HHHHhh
Q 009704 140 VASAAR 145 (528)
Q Consensus 140 lA~l~~ 145 (528)
+|+...
T Consensus 225 ~A~~~~ 230 (285)
T 1wdy_A 225 LAVEKK 230 (285)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 555443
No 56
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.81 E-value=1.1e-19 Score=164.39 Aligned_cols=124 Identities=15% Similarity=0.092 Sum_probs=111.1
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|.+|.||||+|+. |+.+++++|+++|++++..+ .+.+++|.++..++.+++ |++++.+|. .|+||||
T Consensus 31 ~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 108 (162)
T 1ihb_A 31 VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDN-EGNLPLH 108 (162)
T ss_dssp TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHH
T ss_pred ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHH
Confidence 46788999999999999 99999999999999998754 457888777777766655 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Q 009704 74 LAVRLRDPISAEILMAAGAD-WSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAd-vn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~ 126 (528)
+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 109 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 109 LAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999999999999999998 699999999999999999999999999999874
No 57
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.81 E-value=5.5e-20 Score=181.41 Aligned_cols=145 Identities=14% Similarity=0.024 Sum_probs=123.7
Q ss_pred CCCCCChHHHHHHHc---CCHHHHHHHHHcCCCC-------Cc-----CCCCCchhHHHHHHhccccc------cccccc
Q 009704 4 FAKYAHSPVHLAVAR---RDYAALRRIIATLPRL-------SK-----AGEVNTEDESLAAELQADAV------SAVIDR 62 (528)
Q Consensus 4 ~Dk~G~TPLH~Av~~---g~~e~vk~LL~~ga~l-------~~-----~~~~~t~l~~~A~~~~~~~v------ga~In~ 62 (528)
.|.+|.||||+||.. |+.+++++||++|++. +. ...+.+++|.++..++.+++ |++++.
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 478999999999987 9999999999997653 21 23567888888777777655 888988
Q ss_pred cCC-------------CCCCcHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCCcHHHHHHHcCC---------HHHH
Q 009704 63 RDV-------------PGRETPLHLAVRLRDPISAEILMA---AGADWSLQNENGWSALQEAVCTRE---------ESIA 117 (528)
Q Consensus 63 kD~-------------p~G~TPLHlAv~~G~~e~vklLL~---~GAdvn~~n~~G~TpLh~A~~~g~---------~eiv 117 (528)
++. ..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+ .+++
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v 209 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMY 209 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHH
Confidence 883 159999999999999999999999 999999999999999999999988 7899
Q ss_pred HHHHHhCCChh-------HhhhcCCchHHHHHHhhhhh
Q 009704 118 MIIARHYQPLA-------WAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 118 ~lLl~~g~~i~-------~~~~~g~tPl~lA~l~~~~D 148 (528)
++|+++|++++ ..+..|.||+++|+..+..+
T Consensus 210 ~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~ 247 (273)
T 2pnn_A 210 NEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIG 247 (273)
T ss_dssp HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHH
Confidence 99999999886 47889999999999876554
No 58
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.81 E-value=1.5e-19 Score=164.91 Aligned_cols=126 Identities=19% Similarity=0.253 Sum_probs=113.9
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|.+|.||||+|+..|+.+++++|+++|++++..+. +.+++|.++..++.+++ |++++.+|. .|+||||
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 107 (167)
T 3v31_A 29 INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDW-NGGTPLL 107 (167)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TSCCHHH
T ss_pred cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCC-CCCCHHH
Confidence 467899999999999999999999999999999987544 56788777777766655 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCCh
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPL 127 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i 127 (528)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++.+.
T Consensus 108 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 108 YAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999887543
No 59
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.81 E-value=1.6e-19 Score=189.62 Aligned_cols=147 Identities=16% Similarity=0.133 Sum_probs=125.1
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..+..|.||||+||..|+.+++++|+++|++++..+ .+.++++.++..++.+++ |+++|.+|. .|+||||
T Consensus 7 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 85 (437)
T 1n11_A 7 GGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAK-DDQTPLH 85 (437)
T ss_dssp --------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCT-TSCCHHH
T ss_pred ccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCCHHH
Confidence 46778899999999999999999999999999988744 457888888777777665 899999997 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|++++.+.+..+..|.||+++|+.....+
T Consensus 86 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~ 160 (437)
T 1n11_A 86 CAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVR 160 (437)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999988888889999999998765443
No 60
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.81 E-value=2.3e-19 Score=164.74 Aligned_cols=123 Identities=21% Similarity=0.234 Sum_probs=111.2
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|.+|.||||+|+..|+.+++++|+++|++++..+. +.+++|.++..++.+++ |++++.+|. .|+||||
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~ 118 (169)
T 2y1l_E 40 VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDM-EGHTPLH 118 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHH
Confidence 467889999999999999999999999999999987544 57788777777766655 899999997 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHY 124 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g 124 (528)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 119 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 119 LAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999998765
No 61
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.81 E-value=6.8e-20 Score=188.18 Aligned_cols=145 Identities=17% Similarity=0.059 Sum_probs=126.4
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCCCcHHHH
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHL 74 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHl 74 (528)
+..|.+|.||||+||..|+.+++++||++|++++..+. +.++++.++..++.+++ |++++. . .|.||||+
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~-~g~t~L~~ 90 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--W-HGQKPIHL 90 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--B-TTBCHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--c-CCCCHHHH
Confidence 56788999999999999999999999999999988544 57888777777777765 564443 3 68999999
Q ss_pred HHHcCCHHHHHHHHHc----CCCCCC-----------------cCCCCCcHHHHHHHcC--CHHHHHHHHHhCCChhHhh
Q 009704 75 AVRLRDPISAEILMAA----GADWSL-----------------QNENGWSALQEAVCTR--EESIAMIIARHYQPLAWAK 131 (528)
Q Consensus 75 Av~~G~~e~vklLL~~----GAdvn~-----------------~n~~G~TpLh~A~~~g--~~eiv~lLl~~g~~i~~~~ 131 (528)
|+..|+.+++++|+++ |++++. .|..|+||||+|+..| +.+++++|+++|++++..+
T Consensus 91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d 170 (364)
T 3ljn_A 91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKD 170 (364)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCC
T ss_pred HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccC
Confidence 9999999999999999 888887 8899999999999999 9999999999999999999
Q ss_pred hcCCchHHHHHHhhhhhh
Q 009704 132 WCRRLPRIVASAARIRDF 149 (528)
Q Consensus 132 ~~g~tPl~lA~l~~~~Df 149 (528)
..|.||+|+|+.....+.
T Consensus 171 ~~g~t~L~~A~~~g~~~~ 188 (364)
T 3ljn_A 171 KADETPLMRAMEFRNREA 188 (364)
T ss_dssp TTSCCHHHHHHHTTCHHH
T ss_pred CCCCCHHHHHHHcCCHHH
Confidence 999999999998765443
No 62
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.81 E-value=2.9e-20 Score=179.19 Aligned_cols=146 Identities=19% Similarity=0.119 Sum_probs=122.3
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCC----CCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCc
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLP----RLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRET 70 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga----~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~T 70 (528)
+.+|.+|.||||+|+..|+.+++++|++.+. +++..+ .+.++++.++..++.+++ |++++.+|. .|+|
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t 80 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDF-RGNT 80 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCT-TCCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCC
Confidence 4679999999999999999999999998765 466544 357888777777766655 899999997 9999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhh-cCCchHHHHHH
Q 009704 71 PLHLAVRLRDPISAEILMAAGAD------WSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKW-CRRLPRIVASA 143 (528)
Q Consensus 71 PLHlAv~~G~~e~vklLL~~GAd------vn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~-~g~tPl~lA~l 143 (528)
|||+|+..|+.+++++|+.+|++ ++..+..|+||||+|+..|+.+++++|+++|++++..+. .|.||+|+|+.
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~ 160 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVD 160 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999986 567788999999999999999999999999999999887 99999999997
Q ss_pred hhhhh
Q 009704 144 ARIRD 148 (528)
Q Consensus 144 ~~~~D 148 (528)
....+
T Consensus 161 ~~~~~ 165 (236)
T 1ikn_D 161 LQNPD 165 (236)
T ss_dssp TTCHH
T ss_pred cCCHH
Confidence 76444
No 63
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.81 E-value=4.7e-20 Score=158.40 Aligned_cols=109 Identities=19% Similarity=0.256 Sum_probs=100.2
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHH
Q 009704 3 DFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPI 82 (528)
Q Consensus 3 ~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~e 82 (528)
..|.+|.||||+||..|+.+++++|+++| ++++.+|. .|+||||+|+..|+.+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g--------------------------~~~~~~d~-~g~t~L~~A~~~~~~~ 56 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKG--------------------------ADVNARSK-DGNTPLHLAAKNGHAE 56 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTT--------------------------CCSSCCCS-SSCCTTHHHHTTTCHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCCcCC-CCCCHHHHHHHcCcHH
Confidence 47899999999999999999999999984 45777786 8999999999999999
Q ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchH
Q 009704 83 SAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPR 138 (528)
Q Consensus 83 ~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl 138 (528)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..+.+|-
T Consensus 57 ~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 57 IVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999999999999999999999999998888774
No 64
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=2.4e-20 Score=178.66 Aligned_cols=118 Identities=19% Similarity=0.156 Sum_probs=109.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHH
Q 009704 4 FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPIS 83 (528)
Q Consensus 4 ~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~e~ 83 (528)
.+..|.||||+||..|+.+++++||+.| ++++.+|. .|+||||+||..|+.++
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~~~~~~~~ 121 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNR--------------------------VGVNGLDK-AGSTALYWACHGGHKDI 121 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCT-TSCCHHHHHHHTTCHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCC--------------------------CCccccCC-CCCCHHHHHHHcCCHHH
Confidence 4567899999999999999999999984 45777886 89999999999999999
Q ss_pred HHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 84 AEILMAA-GADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 84 vklLL~~-GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+++|+.+ |++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+
T Consensus 122 v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 187 (222)
T 3ehr_A 122 VEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACAS 187 (222)
T ss_dssp HHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHH
T ss_pred HHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHH
Confidence 9999999 9999999999999999999999999999999999999999999999999998665444
No 65
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.80 E-value=2.1e-19 Score=186.60 Aligned_cols=147 Identities=16% Similarity=0.122 Sum_probs=127.9
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------c---ccccccCCCCCCc
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------S---AVIDRRDVPGRET 70 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------g---a~In~kD~p~G~T 70 (528)
+|..|.+|.||||+||..|+.+++++||++|++++..+. +.++++.++..++.+++ + ++++..|. .|.|
T Consensus 159 vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~-~g~t 237 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR-NGMT 237 (373)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCT-TSCC
T ss_pred CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCC-CCCC
Confidence 477899999999999999999999999999999987544 56777777777766554 3 78888997 8999
Q ss_pred HHHHHHHcC---CHHHHHHHHHcCCCCCC--------cCCCCCcHHHHHHHcCCHHHHHHHHHhC-CChhHhhhcCCchH
Q 009704 71 PLHLAVRLR---DPISAEILMAAGADWSL--------QNENGWSALQEAVCTREESIAMIIARHY-QPLAWAKWCRRLPR 138 (528)
Q Consensus 71 PLHlAv~~G---~~e~vklLL~~GAdvn~--------~n~~G~TpLh~A~~~g~~eiv~lLl~~g-~~i~~~~~~g~tPl 138 (528)
|||+|+..+ +.+++++|+++|++++. .|..|+||||+|+..|+.+++++|++++ ++++..+..|.||+
T Consensus 238 ~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL 317 (373)
T 2fo1_E 238 ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPI 317 (373)
T ss_dssp HHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHH
T ss_pred HHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHH
Confidence 999999988 89999999999999886 5678999999999999999999999876 99999999999999
Q ss_pred HHHHHhhhhh
Q 009704 139 IVASAARIRD 148 (528)
Q Consensus 139 ~lA~l~~~~D 148 (528)
|+|+..+..+
T Consensus 318 ~~A~~~g~~~ 327 (373)
T 2fo1_E 318 MLAAQEGRIE 327 (373)
T ss_dssp HHHHHHTCHH
T ss_pred HHHHHcCCHH
Confidence 9999776544
No 66
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.80 E-value=3.3e-19 Score=166.63 Aligned_cols=123 Identities=17% Similarity=0.131 Sum_probs=112.1
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
++..|.+|.||||+|+..|+.+++++|+++|++++..+. +.+++|.++..++.+++ |++++.+|. .|.||||
T Consensus 61 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 139 (192)
T 2rfm_A 61 LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNL-EGETPLI 139 (192)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TCCCHHH
T ss_pred cccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHH
Confidence 467889999999999999999999999999999987544 57888777777766654 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHY 124 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g 124 (528)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 140 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 140 VASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999875
No 67
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.80 E-value=2e-19 Score=178.64 Aligned_cols=143 Identities=18% Similarity=0.107 Sum_probs=121.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHHH
Q 009704 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVR 77 (528)
Q Consensus 5 Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv~ 77 (528)
+..|.||||+||..|+.+++++||++|++++..+ .+.+++|.++..++.+++ |++++.+|. .|+||||+|+.
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~tpL~~A~~ 115 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDN-EGWIPLHAAAS 115 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHH
Confidence 4567899999999999999999999999998754 457888777777776655 899999997 99999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCcCC----------------------------------------------------------
Q 009704 78 LRDPISAEILMAAGADWSLQNE---------------------------------------------------------- 99 (528)
Q Consensus 78 ~G~~e~vklLL~~GAdvn~~n~---------------------------------------------------------- 99 (528)
.|+.+++++|+++|++++..|.
T Consensus 116 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRH 195 (299)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred cCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhh
Confidence 9999999999999999987764
Q ss_pred --CCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 100 --NGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 100 --~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
.|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..+
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~ 246 (299)
T 1s70_B 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEE 246 (299)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred cCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHH
Confidence 4667778888888888888888888888888888888888888765443
No 68
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.80 E-value=1.6e-19 Score=179.96 Aligned_cols=146 Identities=14% Similarity=0.058 Sum_probs=107.9
Q ss_pred CCCCCCCChHHHHHHHcCCH-HHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 2 EDFAKYAHSPVHLAVARRDY-AALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~-e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+..|..|.||||+|+..++. .++++|+..|++++..+ .+.|++|.++..++.+++ +++++.++. .|.||||
T Consensus 46 ~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~-~g~t~l~ 124 (269)
T 4b93_B 46 SAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNA-DQAVPLH 124 (269)
T ss_dssp -----------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCT-TCCCHHH
T ss_pred cccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCC-CCCCccc
Confidence 45677899999999988776 48899999999998854 467888888877777665 889999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..+
T Consensus 125 ~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~ 199 (269)
T 4b93_B 125 LACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVF 199 (269)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred cccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999876443
No 69
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.79 E-value=1.2e-19 Score=169.21 Aligned_cols=112 Identities=18% Similarity=0.139 Sum_probs=104.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHHH
Q 009704 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISA 84 (528)
Q Consensus 5 Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~e~v 84 (528)
+.+|.||||+|+..|+.++++.||+ |+ ++|.+|. .|+||||+|+..|+.+++
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--------------------------~~~~~d~-~g~t~L~~A~~~~~~~~v 92 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DR--------------------------DVDAVDE-NGRTALLFVAGLGSDKCV 92 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TS--------------------------CTTCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cC--------------------------CCCCcCC-CCCCHHHHHHHcCCHHHH
Confidence 5578999999999999999999998 43 4677786 899999999999999999
Q ss_pred HHHHHcCCCCCCcC-CCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHh
Q 009704 85 EILMAAGADWSLQN-ENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAA 144 (528)
Q Consensus 85 klLL~~GAdvn~~n-~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~ 144 (528)
++|+++|++++.++ ..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..
T Consensus 93 ~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 93 RLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 99999999999998 8999999999999999999999999999999999999999999864
No 70
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.79 E-value=1.1e-18 Score=170.40 Aligned_cols=144 Identities=15% Similarity=0.015 Sum_probs=128.6
Q ss_pred CCC-CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 2 EDF-AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 2 n~~-Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
|.. +..|.||||+|+..|+.+++++|+++|++++..+ .+.++++.++..++.+++ |++++.+|. .|+||||
T Consensus 32 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 110 (285)
T 1wdy_A 32 NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDF-YGFTAFM 110 (285)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TCCBHHH
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCc-ccCCHHH
Confidence 344 7789999999999999999999999999988754 456788777777766655 889999997 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCc----------CCCCCcHHHHHHHcCCHHHHHHHHHh-CCChhHhhhcCCchHHHHH
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQ----------NENGWSALQEAVCTREESIAMIIARH-YQPLAWAKWCRRLPRIVAS 142 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~----------n~~G~TpLh~A~~~g~~eiv~lLl~~-g~~i~~~~~~g~tPl~lA~ 142 (528)
+|+..|+.+++++|+++|++++.. +..|+||||+|+..|+.+++++|+++ +.+++..+..|.||+++++
T Consensus 111 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~ 190 (285)
T 1wdy_A 111 EAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 190 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHH
T ss_pred HHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 999999999999999999999988 78899999999999999999999997 9999999999999999998
Q ss_pred Hhhh
Q 009704 143 AARI 146 (528)
Q Consensus 143 l~~~ 146 (528)
....
T Consensus 191 ~~~~ 194 (285)
T 1wdy_A 191 LSSD 194 (285)
T ss_dssp HCSC
T ss_pred Hccc
Confidence 7554
No 71
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.79 E-value=3.3e-20 Score=175.44 Aligned_cols=139 Identities=9% Similarity=-0.083 Sum_probs=100.7
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccc----cc------cccccccCCCCCCcHHHHHHHc
Q 009704 9 HSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQAD----AV------SAVIDRRDVPGRETPLHLAVRL 78 (528)
Q Consensus 9 ~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~----~v------ga~In~kD~p~G~TPLHlAv~~ 78 (528)
+++||.||..|+.+.++.++..+........+.+++|.++..++.+ ++ |+++|.+|. .|+||||+|+..
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~-~g~TpLh~a~~~ 85 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTK-EGTTLFFPLFQG 85 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCT-TCCCTHHHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHhcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHc
Confidence 3455555555555555555554432211122344444433332211 11 778899997 999999999999
Q ss_pred CC------HHHHHHHHHcCCCCCCcCCCCC-cHHHHHHHcCC-----HHHHHHHHH-hCCChhHhhhcCCchHHHHHHhh
Q 009704 79 RD------PISAEILMAAGADWSLQNENGW-SALQEAVCTRE-----ESIAMIIAR-HYQPLAWAKWCRRLPRIVASAAR 145 (528)
Q Consensus 79 G~------~e~vklLL~~GAdvn~~n~~G~-TpLh~A~~~g~-----~eiv~lLl~-~g~~i~~~~~~g~tPl~lA~l~~ 145 (528)
|+ .+++++|+++||+++.+|..|+ ||||+|+..+. .+++++|+. +|++++.++..|+||+++|+...
T Consensus 86 ~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~ 165 (186)
T 3t8k_A 86 GGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQ 165 (186)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTT
T ss_pred CCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcC
Confidence 87 6889999999999999999999 99999998543 568999999 99999999999999999998765
Q ss_pred hhh
Q 009704 146 IRD 148 (528)
Q Consensus 146 ~~D 148 (528)
.+.
T Consensus 166 ~~~ 168 (186)
T 3t8k_A 166 KPI 168 (186)
T ss_dssp CHH
T ss_pred CHH
Confidence 443
No 72
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.79 E-value=1.7e-19 Score=177.89 Aligned_cols=143 Identities=17% Similarity=0.166 Sum_probs=118.4
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHH----cCCCCCc-----CCCCCchhHHHHHH---hccccc------ccc----
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIA----TLPRLSK-----AGEVNTEDESLAAE---LQADAV------SAV---- 59 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~----~ga~l~~-----~~~~~t~l~~~A~~---~~~~~v------ga~---- 59 (528)
+..|.+|.||||+||..|+.++++.||+ .+++++. ...+.+++|.++.. ++.+++ |++
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 4678999999999999999999888886 4555542 34567888777764 555544 433
Q ss_pred ---ccc----cCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC--------------CCCcHHHHHHHcCCHHHHH
Q 009704 60 ---IDR----RDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNE--------------NGWSALQEAVCTREESIAM 118 (528)
Q Consensus 60 ---In~----kD~p~G~TPLHlAv~~G~~e~vklLL~~GAdvn~~n~--------------~G~TpLh~A~~~g~~eiv~ 118 (528)
++. +|. .|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.++++
T Consensus 87 ~~~i~~~~~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~ 165 (273)
T 2pnn_A 87 KQFVNASYTDSYY-KGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVK 165 (273)
T ss_dssp HHHHTCCCCSTTT-TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHH
T ss_pred hHHhhcccccccC-CCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence 333 565 899999999999999999999999999999987 7999999999999999999
Q ss_pred HHHH---hCCChhHhhhcCCchHHHHHHhh
Q 009704 119 IIAR---HYQPLAWAKWCRRLPRIVASAAR 145 (528)
Q Consensus 119 lLl~---~g~~i~~~~~~g~tPl~lA~l~~ 145 (528)
+|++ +|++++..+..|+||+|+|+...
T Consensus 166 ~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~ 195 (273)
T 2pnn_A 166 FLLQNSWQPADISARDSVGNTVLHALVEVA 195 (273)
T ss_dssp HHHHCSSCCCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHhcccCCCCceeeCCCCCcHHHHHHHcc
Confidence 9999 99999999999999999999743
No 73
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.79 E-value=3.6e-19 Score=184.82 Aligned_cols=147 Identities=17% Similarity=0.171 Sum_probs=127.5
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcC---CCCCcC-CCCCchhHHHHHHh---ccccc------cccccc-----
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATL---PRLSKA-GEVNTEDESLAAEL---QADAV------SAVIDR----- 62 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~g---a~l~~~-~~~~t~l~~~A~~~---~~~~v------ga~In~----- 62 (528)
++..|.+|.||||+|+..|+.+++++|++++ ++++.. ..+.++++.++..+ +.+++ |++++.
T Consensus 192 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~ 271 (373)
T 2fo1_E 192 PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAAR 271 (373)
T ss_dssp SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGG
T ss_pred CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccc
Confidence 4678899999999999999999999999987 677764 44577777766665 33333 777765
Q ss_pred ---cCCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchH
Q 009704 63 ---RDVPGRETPLHLAVRLRDPISAEILMAAG-ADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPR 138 (528)
Q Consensus 63 ---kD~p~G~TPLHlAv~~G~~e~vklLL~~G-Advn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl 138 (528)
.|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+
T Consensus 272 ~~~~d~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l 350 (373)
T 2fo1_E 272 KDSEKY-KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTAR 350 (373)
T ss_dssp TSSSSC-CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHH
T ss_pred cCcccc-cCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHH
Confidence 565 8999999999999999999999886 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhh
Q 009704 139 IVASAARIRD 148 (528)
Q Consensus 139 ~lA~l~~~~D 148 (528)
++|+..+..+
T Consensus 351 ~~A~~~g~~~ 360 (373)
T 2fo1_E 351 QLAQANNHHN 360 (373)
T ss_dssp HHHHHTTCHH
T ss_pred HHHHHcCCHH
Confidence 9999876554
No 74
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.79 E-value=7.6e-19 Score=170.85 Aligned_cols=113 Identities=14% Similarity=0.122 Sum_probs=100.6
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCH
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDP 81 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~ 81 (528)
+..+..|.||||+||..|+.+++++||+.| ++++.+|. .|+||||+||..|+.
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g--------------------------~~~~~~d~-~g~tpLh~A~~~g~~ 67 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELEVVQQAVKEM--------------------------NDPSQPNE-EGITALHNAICGANY 67 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHHHHHHHHHHS--------------------------SCTTCCCT-TSCCHHHHHHHTTCH
T ss_pred cccccchhHHHHHHHHcCCHHHHHHHHhcC--------------------------CCCCCCCC-CCCCHHHHHHHcCCH
Confidence 345667889999999999999999999985 45677776 899999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhh-hcCCchHHHH
Q 009704 82 ISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAK-WCRRLPRIVA 141 (528)
Q Consensus 82 e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~-~~g~tPl~lA 141 (528)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+ ..|.||+++|
T Consensus 68 ~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 68 SIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999998876 5899999988
No 75
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.78 E-value=3.8e-19 Score=161.93 Aligned_cols=122 Identities=16% Similarity=0.178 Sum_probs=108.6
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCCCcHHHH
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHL 74 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHl 74 (528)
+..+..|.||||+|+..|+.+++++|+++|++++..+. +.+++|.++..++.+++ |++++.+|. .|+||||+
T Consensus 36 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~ 114 (165)
T 3twr_A 36 RDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADL-WKFTPLHE 114 (165)
T ss_dssp CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHH
T ss_pred cccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCC-CCCCHHHH
Confidence 45678899999999999999999999999999987554 57888777777766655 899999997 99999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Q 009704 75 AVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQ 125 (528)
Q Consensus 75 Av~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~ 125 (528)
|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|+
T Consensus 115 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 115 AAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 999999999999999999999999999999999877 99999999998775
No 76
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.78 E-value=9.9e-19 Score=177.58 Aligned_cols=139 Identities=14% Similarity=0.069 Sum_probs=119.0
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCcCCC-CCchhHHHHHHhccc----cc------cccccccCCCCCCc
Q 009704 3 DFAKYAHSPVHLAVARRDYAALRRIIA-TLPRLSKAGE-VNTEDESLAAELQAD----AV------SAVIDRRDVPGRET 70 (528)
Q Consensus 3 ~~Dk~G~TPLH~Av~~g~~e~vk~LL~-~ga~l~~~~~-~~t~l~~~A~~~~~~----~v------ga~In~kD~p~G~T 70 (528)
..+..|.||||+||..|+.+++++||+ .|++++..+. +.+++++++...... ++ |+++|.+|. .|+|
T Consensus 163 ~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~-~g~t 241 (337)
T 4g8k_A 163 RLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE-RGKT 241 (337)
T ss_dssp -CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCG-GGCC
T ss_pred cccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCC-CCCC
Confidence 356789999999999999999999996 5899987544 567777766655321 11 899999997 9999
Q ss_pred HHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhh
Q 009704 71 PLHLAVRLRDPISAEILMAA-GADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIR 147 (528)
Q Consensus 71 PLHlAv~~G~~e~vklLL~~-GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~ 147 (528)
|||+|+..|+.+++++|+.+ |++++.+|..|+||||+|+..|+.+++++|+++|++++. .+|+++|+.....
T Consensus 242 ~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-----~~~L~~A~~~~~~ 314 (337)
T 4g8k_A 242 PLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC-----GDLVMTARRNYDH 314 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-----CCHHHHHHHTTCH
T ss_pred HHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----CCHHHHHHHcCCH
Confidence 99999999999999999985 899999999999999999999999999999999998764 5699999876543
No 77
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.78 E-value=1.2e-18 Score=157.16 Aligned_cols=116 Identities=22% Similarity=0.220 Sum_probs=106.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHH
Q 009704 4 FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAV 76 (528)
Q Consensus 4 ~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv 76 (528)
.|.+|.||||+|+..|+.+++++|++.|++++..+. +.+++|.++..++.+++ |++++.+|. .|+||||+|+
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 108 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDM-LKMTALHWAT 108 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH
Confidence 577899999999999999999999999999987544 57888777777766655 899999997 9999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Q 009704 77 RLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMII 120 (528)
Q Consensus 77 ~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lL 120 (528)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 109 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 109 EHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999999999999987
No 78
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.78 E-value=1.4e-18 Score=162.52 Aligned_cols=140 Identities=16% Similarity=0.115 Sum_probs=124.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHH
Q 009704 5 AKYAHSPVHLAVARRDYAALRRIIATLP-RLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAV 76 (528)
Q Consensus 5 Dk~G~TPLH~Av~~g~~e~vk~LL~~ga-~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv 76 (528)
+.++.||||+|+..|+.++++.||..+. +++..+ .+.++++.++..++.+++ |++++.+|. .|+||||+|+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~ 80 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNS-ISDSPYLYAG 80 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH
Confidence 4678999999999999999999999876 777643 457888777777776655 899999997 8999999999
Q ss_pred HcCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC-CChhHhhhcCCchHHHHHHhh
Q 009704 77 RLRDPISAEILM-AAGADWSLQNENGWSALQEAVCTREESIAMIIARHY-QPLAWAKWCRRLPRIVASAAR 145 (528)
Q Consensus 77 ~~G~~e~vklLL-~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g-~~i~~~~~~g~tPl~lA~l~~ 145 (528)
..|+.+++++|+ ..+++++..|..|+||||+|+..|+.+++++|++++ .+++..+..|.||+|+|+...
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSS
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhc
Confidence 999999999999 677899999999999999999999999999999998 899999999999999999654
No 79
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.78 E-value=2.5e-19 Score=179.26 Aligned_cols=140 Identities=11% Similarity=-0.036 Sum_probs=124.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCC-CcHHHHHHHc
Q 009704 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGR-ETPLHLAVRL 78 (528)
Q Consensus 7 ~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G-~TPLHlAv~~ 78 (528)
+|.||||+|+..|+.+++++|+++|++++..+ .+.+++|.++..++.+++ |++++.+|. .| .||||+|+..
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~~t~L~~A~~~ 139 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGK-TGWKTSFYHAVML 139 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSS-SGGGSHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCC-CCCCCHHHHHHHc
Confidence 59999999999999999999999999998754 457888777777776655 899999997 88 7999999999
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCch-HHHHHHhhhhh
Q 009704 79 RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLP-RIVASAARIRD 148 (528)
Q Consensus 79 G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tP-l~lA~l~~~~D 148 (528)
|+.+++++|+++|+++... ..|+||||+|+..|+.+++++|+++|++++..+..|.|| +|+|+.....+
T Consensus 140 ~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~ 209 (285)
T 3kea_A 140 NDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIE 209 (285)
T ss_dssp TCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHH
T ss_pred CCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHH
Confidence 9999999999999987333 389999999999999999999999999999999999998 99998766443
No 80
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.78 E-value=1.9e-18 Score=164.76 Aligned_cols=145 Identities=22% Similarity=0.149 Sum_probs=116.9
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
++..|.+|.||||+|+..|+.+++++|++.|++++..+. +.++++.++..++.+++ +++++..+...|.||||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 456788888999999999999999999988888876443 45666666666666554 66666554325889999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhh
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAAR 145 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~ 145 (528)
+|+..|+.+++++|+++|++++..+..|+||||.|+..|+.+++++|++++++++..+..|.||+++++...
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~ 153 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRT 153 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Confidence 999999999999999999998888888999999999999999999999988888888888889998888544
No 81
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.78 E-value=1.6e-18 Score=165.25 Aligned_cols=147 Identities=15% Similarity=0.065 Sum_probs=130.4
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC--CCCchhHHHHHHhccccc------cccccccCCCCCCcHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG--EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPL 72 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~--~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPL 72 (528)
++..|.+|.||||+|+..|+.+++++|++.|++++... ...++++.++..++.+++ |++++.+|. .|.|||
T Consensus 35 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l 113 (240)
T 3eu9_A 35 VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDG-EGCSCI 113 (240)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHH
T ss_pred cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHH
Confidence 46788999999999999999999999999999887633 257888777777776655 889999997 899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC-HHHHHHHHHhCCChhHhhh-cCCchHHHHHHhhhhh
Q 009704 73 HLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTRE-ESIAMIIARHYQPLAWAKW-CRRLPRIVASAARIRD 148 (528)
Q Consensus 73 HlAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~-~eiv~lLl~~g~~i~~~~~-~g~tPl~lA~l~~~~D 148 (528)
|+|+..|+.+++++|+++|++++..+..|+||||+|+..++ .+++++|+..+.+++..+. .|.||+|+|+.....+
T Consensus 114 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 191 (240)
T 3eu9_A 114 HLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTT 191 (240)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHH
T ss_pred HHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999997776 8899999999999998886 8999999999876544
No 82
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.77 E-value=3.8e-19 Score=173.58 Aligned_cols=140 Identities=19% Similarity=0.132 Sum_probs=118.1
Q ss_pred CCCCChHHHHHHHcCCHHHH----HHHHHcCCCCCcC-----CCCCchhHHHH---HHhccccc------c---------
Q 009704 5 AKYAHSPVHLAVARRDYAAL----RRIIATLPRLSKA-----GEVNTEDESLA---AELQADAV------S--------- 57 (528)
Q Consensus 5 Dk~G~TPLH~Av~~g~~e~v----k~LL~~ga~l~~~-----~~~~t~l~~~A---~~~~~~~v------g--------- 57 (528)
+.+|++|||.||..|+.+++ ++|++.+++++.. ..+.+++|.++ ..++.+++ |
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 67899999999999999954 4455589888864 33678887776 34555544 3
Q ss_pred --ccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC--------------CCCCcHHHHHHHcCCHHHHHHHH
Q 009704 58 --AVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQN--------------ENGWSALQEAVCTREESIAMIIA 121 (528)
Q Consensus 58 --a~In~kD~p~G~TPLHlAv~~G~~e~vklLL~~GAdvn~~n--------------~~G~TpLh~A~~~g~~eiv~lLl 121 (528)
..++..|. .|+||||+||..|+.++|++|+++|++++..+ ..|+||||+|+..|+.+++++|+
T Consensus 82 ~~~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 160 (260)
T 3jxi_A 82 INSPFRDVYY-RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT 160 (260)
T ss_dssp HTCCBCCSSE-ESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hccccccccc-CCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 33455565 79999999999999999999999999999998 68999999999999999999999
Q ss_pred H---hCCChhHhhhcCCchHHHHHHhh
Q 009704 122 R---HYQPLAWAKWCRRLPRIVASAAR 145 (528)
Q Consensus 122 ~---~g~~i~~~~~~g~tPl~lA~l~~ 145 (528)
+ +|++++..+..|+||+|+|+...
T Consensus 161 ~~~~~ga~~~~~d~~g~TpLh~A~~~~ 187 (260)
T 3jxi_A 161 ENGHKQADLRRQDSRGNTVLHALVAIA 187 (260)
T ss_dssp HCSSCCCCTTCCCTTSCCHHHHHHHHC
T ss_pred hccccCCCCcccCCCCCcHHHHHHHhc
Confidence 9 99999999999999999999643
No 83
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.77 E-value=2.8e-19 Score=175.03 Aligned_cols=111 Identities=18% Similarity=0.143 Sum_probs=103.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHHH
Q 009704 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISA 84 (528)
Q Consensus 5 Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~e~v 84 (528)
+..|.||||+||..|+.++++.||+ |+ ++|.+|. .|+||||+||..|+.+++
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--------------------------~~~~~d~-~g~t~L~~A~~~g~~~~v 93 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DR--------------------------DVDAVDE-NGRTALLFVAGLGSDKCV 93 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TC--------------------------CTTCBCT-TSCBHHHHHHHHTCHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CC--------------------------CCCCcCC-CCCCHHHHHHHCCCHHHH
Confidence 4578999999999999999999998 53 4677786 899999999999999999
Q ss_pred HHHHHcCCCCCCcC-CCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHH
Q 009704 85 EILMAAGADWSLQN-ENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASA 143 (528)
Q Consensus 85 klLL~~GAdvn~~n-~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l 143 (528)
++|+++|++++.++ ..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.
T Consensus 94 ~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 94 RLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 99999999999998 889999999999999999999999999999999999999999984
No 84
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.77 E-value=1.8e-18 Score=155.71 Aligned_cols=120 Identities=15% Similarity=0.185 Sum_probs=108.6
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
+|..|.+|.||||+ +..|+.+++++|+++|++++..+. +.+++|.++..++.+++ |++++.+|. .|+||||
T Consensus 29 ~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 106 (156)
T 1bd8_A 29 PDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDG-TGALPIH 106 (156)
T ss_dssp TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCHHH
T ss_pred ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCcHHH
Confidence 46788999999999 999999999999999999988544 57788777777766655 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHh
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARH 123 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~ 123 (528)
+|+..|+.+++++|+++ ++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 107 ~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 107 LAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999999 99999999999999999999999999999864
No 85
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.77 E-value=2.6e-18 Score=152.27 Aligned_cols=97 Identities=26% Similarity=0.319 Sum_probs=90.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~ 80 (528)
+|..|.+|.||||+||..|+.+++++|+++| ++++.+|. .|+||||+|+..|+
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--------------------------~~~~~~d~-~g~t~L~~A~~~~~ 92 (136)
T 2jab_A 40 VNAKDEYGLTPLYLATAHGHLEIVEVLLKNG--------------------------ADVNAVDA-IGFTPLHLAAFIGH 92 (136)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCT-TCCCHHHHHHHHTC
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCcCCC-CCCCHHHHHHHcCC
Confidence 4678999999999999999999999999984 45777886 89999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Q 009704 81 PISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHY 124 (528)
Q Consensus 81 ~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g 124 (528)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 93 ~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 93 LEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999875
No 86
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.76 E-value=3.3e-18 Score=158.27 Aligned_cols=107 Identities=19% Similarity=0.104 Sum_probs=95.0
Q ss_pred CchhHHHHHHhccccc-------cccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Q 009704 41 NTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTRE 113 (528)
Q Consensus 41 ~t~l~~~A~~~~~~~v-------ga~In~kD~p~G~TPLHlAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~ 113 (528)
.++++.++..++.+.+ +.+++.+|. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 84 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDD-HGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGH 84 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCcccccccCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 4566666666666544 677899997 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 114 ESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 114 ~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
.+++++|+++|++++..+..|.||+|+|+.....+
T Consensus 85 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 119 (179)
T 3f6q_A 85 RDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQ 119 (179)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999999999999766443
No 87
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.76 E-value=7.6e-18 Score=171.07 Aligned_cols=143 Identities=15% Similarity=0.023 Sum_probs=110.6
Q ss_pred CCCCC-CCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC-CchhHHHHHHhccccc------cccccccCCCCCCcHHH
Q 009704 2 EDFAK-YAHSPVHLAVARRDYAALRRIIATLPRLSKAGEV-NTEDESLAAELQADAV------SAVIDRRDVPGRETPLH 73 (528)
Q Consensus 2 n~~Dk-~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~-~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLH 73 (528)
|.++. .|+||||+||..|+.+++++||++|++++..+.. .++++..+.......+ +++++.+|. .|+||||
T Consensus 52 n~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~g~t~l~ 130 (337)
T 4g8k_A 52 NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDF-YGFTAFM 130 (337)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCT-TCCBHHH
T ss_pred CccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhcc-CCCCHHH
Confidence 44543 4778888888888888888888888777764443 3444433333332221 678888897 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCc----------CCCCCcHHHHHHHcCCHHHHHHHHH-hCCChhHhhhcCCchHHHHH
Q 009704 74 LAVRLRDPISAEILMAAGADWSLQ----------NENGWSALQEAVCTREESIAMIIAR-HYQPLAWAKWCRRLPRIVAS 142 (528)
Q Consensus 74 lAv~~G~~e~vklLL~~GAdvn~~----------n~~G~TpLh~A~~~g~~eiv~lLl~-~g~~i~~~~~~g~tPl~lA~ 142 (528)
+|+..|+.+++++|+.+|++++.. +..|+||||+|+..|+.+++++|+. .|++++..+..|++|++.++
T Consensus 131 ~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~ 210 (337)
T 4g8k_A 131 EAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 210 (337)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHH
T ss_pred HHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHH
Confidence 999999999999999999998764 3468999999999999999999996 58999999999999998877
Q ss_pred Hhh
Q 009704 143 AAR 145 (528)
Q Consensus 143 l~~ 145 (528)
...
T Consensus 211 ~~~ 213 (337)
T 4g8k_A 211 LSS 213 (337)
T ss_dssp HHS
T ss_pred HHc
Confidence 643
No 88
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.75 E-value=1.1e-18 Score=154.68 Aligned_cols=98 Identities=15% Similarity=0.115 Sum_probs=91.6
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCC-CCcHHHHHHHcC
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPG-RETPLHLAVRLR 79 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~-G~TPLHlAv~~G 79 (528)
+|..|.+|.||||+|+. |+.+++++|+++| ++++.+|. . |+||||+|+..|
T Consensus 38 ~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g--------------------------~~~~~~~~-~~g~t~L~~A~~~~ 89 (136)
T 1d9s_A 38 PNALNRFGRRPIQVMMM-GSAQVAELLLLHG--------------------------AEPNCADP-ATLTRPVHDAAREG 89 (136)
T ss_dssp TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHT--------------------------CCSSCCBT-TTTBCHHHHHHHHT
T ss_pred cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCC--------------------------CCCCCcCC-CCCCCHHHHHHHcC
Confidence 46789999999999999 9999999999985 45777786 7 999999999999
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Q 009704 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (528)
Q Consensus 80 ~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~ 126 (528)
+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|++
T Consensus 90 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 90 FLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999874
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.74 E-value=1.3e-17 Score=143.41 Aligned_cols=99 Identities=23% Similarity=0.330 Sum_probs=92.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~ 80 (528)
++..|..|.||||+|+..|+.+++++|+++| ++++.+|. .|.||||+|+..|+
T Consensus 28 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--------------------------~~~~~~~~-~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 28 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAG--------------------------ADVNAKDK-NGRTPLHLAARNGH 80 (126)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCT-TSCCHHHHHHHTTC
T ss_pred CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC--------------------------CCCcccCC-CCCcHHHHHHHcCh
Confidence 4678899999999999999999999999984 45677776 89999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Q 009704 81 PISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (528)
Q Consensus 81 ~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~ 126 (528)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999875
No 90
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.73 E-value=1.4e-18 Score=168.98 Aligned_cols=128 Identities=13% Similarity=0.078 Sum_probs=111.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHHH
Q 009704 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVR 77 (528)
Q Consensus 5 Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv~ 77 (528)
+..|.||||+|+..|+.+++++||+.|++++..+ .+.+++|.++..++.+++ |+++|.+|. .|+||||+|+.
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~tpL~~A~~ 112 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADS-DGWTPLHCAAS 112 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHH
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHH
Confidence 3567999999999999999999999999998854 467888888877777655 899999998 99999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCcCCCCC-cHHHHH--HHcCCHHHHHHHHHhCCChhHhhhc
Q 009704 78 LRDPISAEILMAAGADWSLQNENGW-SALQEA--VCTREESIAMIIARHYQPLAWAKWC 133 (528)
Q Consensus 78 ~G~~e~vklLL~~GAdvn~~n~~G~-TpLh~A--~~~g~~eiv~lLl~~g~~i~~~~~~ 133 (528)
.|+.+++++|+++|++++.++..|. ||||+| +..|+.+++++|+.++++++..+..
T Consensus 113 ~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~ 171 (239)
T 1ycs_B 113 CNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKG 171 (239)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGG
T ss_pred cCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccc
Confidence 9999999999999999999997777 999999 7889999999999999887765443
No 91
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.73 E-value=6.2e-18 Score=171.56 Aligned_cols=131 Identities=16% Similarity=0.111 Sum_probs=98.6
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCc-------CCCCCchhHHHHHH---hccccc------cccccccCCCCCCcH
Q 009704 8 AHSPVHLAVARRDYAALRRIIATLPRLSK-------AGEVNTEDESLAAE---LQADAV------SAVIDRRDVPGRETP 71 (528)
Q Consensus 8 G~TPLH~Av~~g~~e~vk~LL~~ga~l~~-------~~~~~t~l~~~A~~---~~~~~v------ga~In~kD~p~G~TP 71 (528)
+.++||.|+..|+.+.++.|+..|++++. ...+.+++|.++.. ++.+++ |+++|.+|. .|+||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~-~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCT-TCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCC-CCCCH
Confidence 34679999999999999999999998875 33345666655554 333333 788888886 78888
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhh
Q 009704 72 LHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAAR 145 (528)
Q Consensus 72 LHlAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~ 145 (528)
||+|+..|+.+++++||++||+++.+|..|+||||+|+..|+.+++++|+++|++ .|.||+|+|+...
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWV 297 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcC
Confidence 8888888888888888888888888888888888888888888888888887754 5778888887544
No 92
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.72 E-value=1.7e-17 Score=166.31 Aligned_cols=98 Identities=16% Similarity=0.210 Sum_probs=91.8
Q ss_pred CCCCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHc
Q 009704 2 EDFAKYAHSPVHLAVAR---RDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRL 78 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~---g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~ 78 (528)
+..|..|.||||+|+.. |+.+++++||++| +++|.+|. .|+||||+|+..
T Consensus 163 ~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g--------------------------a~in~~d~-~g~TpLh~A~~~ 215 (278)
T 1dcq_A 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS--------------------------GNLDKQTG-KGSTALHYCCLT 215 (278)
T ss_dssp SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC--------------------------SCTTCCCT-TCCCHHHHHHHT
T ss_pred cccccCCCCcchHHHHhcccchHHHHHHHHHCC--------------------------CCccccCC-CCCCHHHHHHHc
Confidence 45588999999999999 8999999999994 56788887 899999999999
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Q 009704 79 RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (528)
Q Consensus 79 G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~ 126 (528)
|+.+++++||++||+++.+|..|+||||+|+..|+.+++++|+++|+.
T Consensus 216 g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 216 DNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999874
No 93
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.72 E-value=1.5e-17 Score=142.73 Aligned_cols=92 Identities=25% Similarity=0.285 Sum_probs=83.2
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCH
Q 009704 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDP 81 (528)
Q Consensus 2 n~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~ 81 (528)
...|.+|.||||+||..|+.+++++|++.| ++++.+|. .|+||||+||..|+.
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--------------------------~~i~~~d~-~g~tpLh~A~~~~~~ 70 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANG--------------------------ADVAAKDK-NGSTPLHLAARNGHL 70 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCT-TCCCHHHHHHHTTCH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCccCC-CCCCHHHHHHHcCCH
Confidence 456889999999999999999999999984 45777786 899999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Q 009704 82 ISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMII 120 (528)
Q Consensus 82 e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lL 120 (528)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 71 ~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 71 EVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999999999999999999886
No 94
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.72 E-value=2.4e-18 Score=167.33 Aligned_cols=113 Identities=18% Similarity=0.141 Sum_probs=103.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~ 80 (528)
+|..|.+|.||||+||..|+.+++++||+.| +++|.+|. .|+||||+|+..|+
T Consensus 47 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g--------------------------a~~n~~d~-~g~tpLh~A~~~g~ 99 (229)
T 2vge_A 47 PSQPNEEGITALHNAICGANYSIVDFLITAG--------------------------ANVNSPDS-HGWTPLHCAASCND 99 (229)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTCCCT-TCCCHHHHHHHTTC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC--------------------------CCCCCCCC-CCCCHHHHHHHcCC
Confidence 4678999999999999999999999999984 56778887 89999999999999
Q ss_pred HHHHHHHHHcCCCCCCcC-CCCCcHHHHH--HHcCCHHHHHHHHHhCCChhHhhhcCCchHHH
Q 009704 81 PISAEILMAAGADWSLQN-ENGWSALQEA--VCTREESIAMIIARHYQPLAWAKWCRRLPRIV 140 (528)
Q Consensus 81 ~e~vklLL~~GAdvn~~n-~~G~TpLh~A--~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~l 140 (528)
.+++++|+++|++++.++ ..|+||||+| +..|+.+++++|+++|++++..+..+.+|++.
T Consensus 100 ~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~ 162 (229)
T 2vge_A 100 TVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWD 162 (229)
T ss_dssp HHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSC
T ss_pred HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHH
Confidence 999999999999999996 6999999999 99999999999999999998888777776664
No 95
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.71 E-value=2.3e-17 Score=164.41 Aligned_cols=123 Identities=21% Similarity=0.205 Sum_probs=111.2
Q ss_pred CCCCCCCCChHHHHHH-----HcCCHHHHHHHHHcCCCCCcCCC-CCchhHHHHHHhccccc------cccccccCCCCC
Q 009704 1 MEDFAKYAHSPVHLAV-----ARRDYAALRRIIATLPRLSKAGE-VNTEDESLAAELQADAV------SAVIDRRDVPGR 68 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av-----~~g~~e~vk~LL~~ga~l~~~~~-~~t~l~~~A~~~~~~~v------ga~In~kD~p~G 68 (528)
+|..|.+|.||||+|+ ..++.+++++|++.|...+..+. +.+++|.++..++.+++ |+++|.+|. .|
T Consensus 138 ~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~-~G 216 (276)
T 4hbd_A 138 VDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDD-DG 216 (276)
T ss_dssp TTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TS
T ss_pred CCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CC
Confidence 4678999999999999 66899999999999987776444 67888888887777655 999999997 99
Q ss_pred CcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Q 009704 69 ETPLHLAVRLRDPISAEILMA-AGADWSLQNENGWSALQEAVCTREESIAMIIARHY 124 (528)
Q Consensus 69 ~TPLHlAv~~G~~e~vklLL~-~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g 124 (528)
+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 217 ~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 217 STALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999999999999999 89999999999999999999999999999999875
No 96
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.70 E-value=3.8e-17 Score=176.55 Aligned_cols=105 Identities=21% Similarity=0.178 Sum_probs=89.9
Q ss_pred CCCCChHHHHHHH---cCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCH
Q 009704 5 AKYAHSPVHLAVA---RRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDP 81 (528)
Q Consensus 5 Dk~G~TPLH~Av~---~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~ 81 (528)
|..|.||||+||. .|+.+++++||++| +++|.+|. .|+||||+||..|+.
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g--------------------------a~vn~~d~-~g~TpLh~A~~~g~~ 220 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNG--------------------------GHLDAKAA-DGNTALHYAALYNQP 220 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHS--------------------------CCTTCCCS-SSCCHHHHHTTTTCH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcC--------------------------CCCCccCC-CCCcHHHHHHHcCCH
Confidence 8899999999977 89999999999984 56788887 899999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHH
Q 009704 82 ISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVAS 142 (528)
Q Consensus 82 e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~ 142 (528)
++|++||++||+++.+|..|+||||+|+..|+.+++++|+++|++++. +|+|++.
T Consensus 221 ~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 221 DCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDY 275 (497)
T ss_dssp HHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeec
Confidence 999999999999999999999999999999999999999999999775 4666554
No 97
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.69 E-value=1.3e-16 Score=159.78 Aligned_cols=119 Identities=21% Similarity=0.177 Sum_probs=107.1
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHc---CCHHHHH
Q 009704 9 HSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRL---RDPISAE 85 (528)
Q Consensus 9 ~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~---G~~e~vk 85 (528)
.++||.|+..|+.+.+..++..|++++.. ..++..|. .|+||||+|+.. |+.++++
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~--------------------~~l~~~~~-~g~t~Lh~A~~~~~~~~~~~v~ 189 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEK--------------------IPLANGHE-PDETALHLAVRSVDRTSLHIVD 189 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSB--------------------CCCSSCSS-TTCBHHHHHHHHCCTTTHHHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhh--------------------cccccccc-CCCCcchHHHHhcccchHHHHH
Confidence 46899999999999999999998765421 12666676 899999999999 8999999
Q ss_pred HHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 86 ILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 86 lLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+|+++||+++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+
T Consensus 190 ~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~ 252 (278)
T 1dcq_A 190 FLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEH 252 (278)
T ss_dssp HHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999876544
No 98
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.69 E-value=5.7e-17 Score=169.51 Aligned_cols=115 Identities=17% Similarity=0.165 Sum_probs=95.0
Q ss_pred CCChHHHHHHHc-CCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccC--CCCCCcHHHHHHHcCCHHH
Q 009704 7 YAHSPVHLAVAR-RDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRD--VPGRETPLHLAVRLRDPIS 83 (528)
Q Consensus 7 ~G~TPLH~Av~~-g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD--~p~G~TPLHlAv~~G~~e~ 83 (528)
.+.||||+|+.. |+.++++.||.+|+++ |..| . .|.||||+|+..|+.++
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv--------------------------n~~~~~~-~g~TpLh~Aa~~g~~~i 250 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADV--------------------------NWVNGGQ-DNATPLIQATAANSLLA 250 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCT--------------------------TCCCTTT-TCCCHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCC--------------------------Ccccccc-CCCCHHHHHHHCCCHHH
Confidence 456899999999 9999999999996554 4444 4 68888888888888888
Q ss_pred HHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 84 AEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 84 vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+++||++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 251 v~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~ 315 (368)
T 3jue_A 251 CEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANAD 315 (368)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHH
Confidence 88888888888888888888888888888888888888888888888888888888887665444
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.67 E-value=3.9e-17 Score=156.19 Aligned_cols=108 Identities=14% Similarity=0.053 Sum_probs=85.9
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~ 80 (528)
+|..|.+|.||||+||..|+.+++++||+.+ |++++.+|. .|+||||+|+..|+
T Consensus 99 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-------------------------g~~~~~~d~-~g~tpL~~A~~~~~ 152 (222)
T 3ehr_A 99 VNGLDKAGSTALYWACHGGHKDIVEMLFTQP-------------------------NIELNQQNK-LGDTALHAAAWKGY 152 (222)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHTTST-------------------------TCCCCCCCT-TSCCHHHHHHHHTC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHcCC-------------------------CCCccccCC-CCCCHHHHHHHcCC
Confidence 4678999999999999999999999999871 346778887 89999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcC
Q 009704 81 PISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCR 134 (528)
Q Consensus 81 ~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g 134 (528)
.+++++|+++||+++.+|..|+||||+|+..++.++++.|+..++.....+..+
T Consensus 153 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 153 ADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp HHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred HHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence 999999999999999999999999999999999999999999988876655443
No 100
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.67 E-value=1.8e-16 Score=171.33 Aligned_cols=119 Identities=13% Similarity=0.120 Sum_probs=104.8
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHH---cCCHHHHH
Q 009704 9 HSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVR---LRDPISAE 85 (528)
Q Consensus 9 ~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~---~G~~e~vk 85 (528)
.+.||.|+..|+.++++.||..|++++.... ....|. .|+||||+||. .|+.++++
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~--------------------~~~~~~-~g~t~Lh~A~~~a~~g~~~~v~ 191 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLP--------------------GPDAQA-PEELVLHLAVKVANQASLPLVD 191 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBC--------------------CSSSCC-SCBCHHHHHHHTCCTTTHHHHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCC--------------------Cccccc-ccchHHHHHHHhcccccHHHHH
Confidence 3679999999999999999999876653211 112254 79999999977 89999999
Q ss_pred HHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 86 ILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 86 lLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+||++||+++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+.....+
T Consensus 192 ~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 254 (497)
T 3lvq_E 192 FIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 254 (497)
T ss_dssp HHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999766544
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.66 E-value=3.3e-16 Score=136.05 Aligned_cols=83 Identities=22% Similarity=0.251 Sum_probs=76.8
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~ 80 (528)
+|..|.+|.||||+|+..|+.+++++|+++| ++++.+|. .|+||||+|+..|+
T Consensus 33 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--------------------------~~~~~~d~-~g~tpL~~A~~~~~ 85 (123)
T 3aaa_C 33 VNRTLEGGRKPLHYAADCGQLEILEFLLLKG--------------------------ADINAPDK-HHITPLLSAVYEGH 85 (123)
T ss_dssp TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT--------------------------CCTTCCCT-TSCCHHHHHHHHTC
T ss_pred cCccCCCCCcHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCcCCC-CCCCHHHHHHHcCC
Confidence 4678899999999999999999999999984 46778886 89999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Q 009704 81 PISAEILMAAGADWSLQNENGWSALQEAVC 110 (528)
Q Consensus 81 ~e~vklLL~~GAdvn~~n~~G~TpLh~A~~ 110 (528)
.+++++|+++|++++.+|..|+||||+|+.
T Consensus 86 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 86 VSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 999999999999999999999999999943
No 102
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.65 E-value=5.2e-16 Score=162.26 Aligned_cols=99 Identities=20% Similarity=0.213 Sum_probs=90.7
Q ss_pred CCCCC--CCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHc
Q 009704 1 MEDFA--KYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRL 78 (528)
Q Consensus 1 In~~D--k~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~ 78 (528)
+|..| .+|.||||+||..|+.+++++||++| +++|.+|. .|+||||+|+..
T Consensus 226 vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G--------------------------advn~~d~-~G~TpLh~A~~~ 278 (368)
T 3jue_A 226 VNWVNGGQDNATPLIQATAANSLLACEFLLQNG--------------------------ANVNQADS-AGRGPLHHATIL 278 (368)
T ss_dssp TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTCCCT-TSCCHHHHHHHH
T ss_pred CCccccccCCCCHHHHHHHCCCHHHHHHHHHcC--------------------------CCCCCCCC-CCCCHHHHHHHc
Confidence 35556 88999999999999999999999984 56778887 899999999999
Q ss_pred CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Q 009704 79 RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (528)
Q Consensus 79 G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~ 126 (528)
|+.+++++||++||+++.+|..|+||||+|+..|+.+++++|+.++..
T Consensus 279 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999987643
No 103
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.64 E-value=5.3e-17 Score=143.56 Aligned_cols=98 Identities=14% Similarity=0.172 Sum_probs=85.8
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~ 80 (528)
+|..|.+|.||||+|+..|+.+++++|+++| ++++.+|. .|+||||+|+..|+
T Consensus 36 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~~~~~ 88 (137)
T 3c5r_A 36 PNVKDHAGWTPLHEACNHGHLKVVELLLQHK--------------------------ALVNTTGY-QNDSPLHDAAKNGH 88 (137)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTCCCG-GGCCHHHHHHHTTC
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC--------------------------CcccCcCC-CCCCHHHHHHHcCC
Confidence 4678899999999999999999999999984 45777786 89999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Q 009704 81 PISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQ 125 (528)
Q Consensus 81 ~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~ 125 (528)
.+++++|+++|++++.+|..|+||||+|+..+..+++.+|.+...
T Consensus 89 ~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 89 VDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 999999999999999999999999999998888888877765543
No 104
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.64 E-value=6.5e-17 Score=164.98 Aligned_cols=137 Identities=12% Similarity=0.027 Sum_probs=107.4
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCC---------------C--CCchhHHHHHHhcc-ccc------
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG---------------E--VNTEDESLAAELQA-DAV------ 56 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~---------------~--~~t~l~~~A~~~~~-~~v------ 56 (528)
|+..|.+|.|++| |+.++++.||++|.+.+... . .....++++..... +++
T Consensus 45 i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~ 119 (327)
T 1sw6_A 45 IMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNT 119 (327)
T ss_dssp CEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTS
T ss_pred cccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhc
Confidence 4567889999988 99999999999987654310 0 00111223333322 211
Q ss_pred cccccc-cCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC---HHHHHHHHHhC-CChhHhh
Q 009704 57 SAVIDR-RDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTRE---ESIAMIIARHY-QPLAWAK 131 (528)
Q Consensus 57 ga~In~-kD~p~G~TPLHlAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~---~eiv~lLl~~g-~~i~~~~ 131 (528)
|+++|. +|. .|+||||+||..|+.++|++||++||+++.+|..|+||||+|+..|+ .+++..|++++ ++++..+
T Consensus 120 g~dvn~~~d~-~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d 198 (327)
T 1sw6_A 120 QLNLNIPVDE-HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED 198 (327)
T ss_dssp CCCSCSCCST-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEEC
T ss_pred CCCcccccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCC
Confidence 799999 897 99999999999999999999999999999999999999999999998 67888888876 7789999
Q ss_pred hcCCchHHHHHH
Q 009704 132 WCRRLPRIVASA 143 (528)
Q Consensus 132 ~~g~tPl~lA~l 143 (528)
..|.||+|+|+.
T Consensus 199 ~~g~tpLh~A~~ 210 (327)
T 1sw6_A 199 SMNRTILHHIII 210 (327)
T ss_dssp TTCCCHHHHHHH
T ss_pred CCCCCHHHHHHH
Confidence 999999999986
No 105
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.64 E-value=7.2e-16 Score=143.52 Aligned_cols=105 Identities=21% Similarity=0.249 Sum_probs=90.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccC-CCCCCcHHHHHHHcC
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRD-VPGRETPLHLAVRLR 79 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD-~p~G~TPLHlAv~~G 79 (528)
+|..|.+|+||||+|+..|+.+++++|+++| +++|.+| . .|+||||+|+..|
T Consensus 69 ~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g--------------------------a~~~~~~~~-~g~tpL~~A~~~~ 121 (183)
T 3deo_A 69 VDAVDENGRTALLFVAGLGSDKCVRLLAEAG--------------------------ADLDHRDMR-GGLTALHMAAGYV 121 (183)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCSS-SSCCHHHHHHHTT
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC--------------------------CCCCcCCCC-CCCCHHHHHHhcC
Confidence 4778999999999999999999999999985 4566666 5 8999999999999
Q ss_pred CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhhh
Q 009704 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (528)
Q Consensus 80 ~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~Df 149 (528)
+.+++++|+++|++++.+|..|+||||+|+..++. ..+.+|+++++..+..+.
T Consensus 122 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i 174 (183)
T 3deo_A 122 RPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKV 174 (183)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHH
Confidence 99999999999999999999999999999874322 346788888887665554
No 106
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.63 E-value=7.2e-17 Score=152.42 Aligned_cols=126 Identities=11% Similarity=-0.009 Sum_probs=107.1
Q ss_pred CCCC-CCCChHHHHHHHcCC----HHHHHHHHHcCCCCCcCC-CCCchhHHHHHHhccc------cc------ccccccc
Q 009704 2 EDFA-KYAHSPVHLAVARRD----YAALRRIIATLPRLSKAG-EVNTEDESLAAELQAD------AV------SAVIDRR 63 (528)
Q Consensus 2 n~~D-k~G~TPLH~Av~~g~----~e~vk~LL~~ga~l~~~~-~~~t~l~~~A~~~~~~------~v------ga~In~k 63 (528)
|..+ .+|+||||+|+.+|+ .+++++||++|++++..+ .+.+++|.++..++.+ ++ |+++|.+
T Consensus 31 ~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~ 110 (186)
T 3t8k_A 31 EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITAL 110 (186)
T ss_dssp SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSC
T ss_pred ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCcc
Confidence 3444 679999999999985 999999999999999854 4678888777766432 22 9999999
Q ss_pred CCCCCC-cHHHHHHHcC-----CHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChh
Q 009704 64 DVPGRE-TPLHLAVRLR-----DPISAEILMA-AGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLA 128 (528)
Q Consensus 64 D~p~G~-TPLHlAv~~G-----~~e~vklLL~-~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~ 128 (528)
|. .|+ ||||+|+..+ +.+++++|++ +||+++.+|..|+||||+|+..|+.+++++|..+....+
T Consensus 111 d~-~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 111 YK-PYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp BG-GGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred CC-CcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 98 899 9999999955 3569999999 999999999999999999999999999999998765443
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.63 E-value=6.5e-16 Score=151.09 Aligned_cols=105 Identities=21% Similarity=0.258 Sum_probs=90.9
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCC
Q 009704 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (528)
Q Consensus 1 In~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~ 80 (528)
+|..|.+|+||||+||..|+.+++++||++| +++|.+|...|+||||+|+..|+
T Consensus 70 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--------------------------a~~~~~~~~~g~t~L~~A~~~g~ 123 (244)
T 3ui2_A 70 VDAVDENGRTALLFVAGLGSDKCVRLLAEAG--------------------------ADLDHRDMRGGLTALHMAAGYVR 123 (244)
T ss_dssp TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT--------------------------CCTTCCCSSSCCCHHHHHHHTTC
T ss_pred CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC--------------------------CCCCcCCCCCCCCHHHHHHHcCC
Confidence 4788999999999999999999999999985 45666662279999999999999
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 81 PISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 81 ~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
.+++++|+++|++++.+|..|+||||+|+..++ ...+.+|+++++.....+
T Consensus 124 ~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~ 174 (244)
T 3ui2_A 124 PEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEK 174 (244)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHH
Confidence 999999999999999999999999999985322 246789999998766555
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.62 E-value=1.2e-15 Score=126.24 Aligned_cols=82 Identities=23% Similarity=0.254 Sum_probs=76.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhh
Q 009704 67 GRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (528)
Q Consensus 67 ~G~TPLHlAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~ 146 (528)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+....
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999997764
Q ss_pred hh
Q 009704 147 RD 148 (528)
Q Consensus 147 ~D 148 (528)
.+
T Consensus 81 ~~ 82 (93)
T 1n0q_A 81 LE 82 (93)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 109
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.59 E-value=1.5e-15 Score=137.52 Aligned_cols=108 Identities=18% Similarity=0.144 Sum_probs=97.3
Q ss_pred CCCchhHHHHHHhccccc------cccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCc-HHHHHHHc
Q 009704 39 EVNTEDESLAAELQADAV------SAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWS-ALQEAVCT 111 (528)
Q Consensus 39 ~~~t~l~~~A~~~~~~~v------ga~In~kD~p~G~TPLHlAv~~G~~e~vklLL~~GAdvn~~n~~G~T-pLh~A~~~ 111 (528)
...++++.++..++.+++ |++++.+|. .|+||||+|+ .|+.+++++|+++|++++.+|..|+| |||+|+..
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~ 88 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPNAPNS-YGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAARE 88 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCS-SSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHH
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHC
Confidence 346777777777776655 889999997 9999999995 99999999999999999999999999 99999999
Q ss_pred CCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 112 REESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 112 g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 89 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 125 (156)
T 1bi7_B 89 GFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRD 125 (156)
T ss_dssp TCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHH
Confidence 9999999999999999999999999999999776443
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.52 E-value=2.4e-15 Score=157.62 Aligned_cols=119 Identities=12% Similarity=-0.027 Sum_probs=89.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHHH
Q 009704 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISA 84 (528)
Q Consensus 5 Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~e~v 84 (528)
+.++.||||+||..|+.+++++|++.|+... ..+..+. .|.||||+||..|+.++|
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~-----------------------~~~~~~~-~~~tpL~~Aa~~G~~eiv 144 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDE-----------------------IVKVIQA-ENYQAFRLAAENGHLHVL 144 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCS-----------------------SCC--CH-HHHHHHHHHHHTTCHHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHH-----------------------HHHHhcc-CCCCHHHHHHHcCCHHHH
Confidence 4456799999999999999999999865211 1122232 467899999999999999
Q ss_pred HHHHHcCCCC---CCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhH--hhhcCCchHHHHH-Hhhhhh
Q 009704 85 EILMAAGADW---SLQNENGWSALQEAVCTREESIAMIIARHYQPLAW--AKWCRRLPRIVAS-AARIRD 148 (528)
Q Consensus 85 klLL~~GAdv---n~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~--~~~~g~tPl~lA~-l~~~~D 148 (528)
++|+++|+++ +..+.+ +||||+|+..|+.+++++|+++|++++. .+..|.||+|+|+ ..+..+
T Consensus 145 ~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~e 213 (376)
T 2aja_A 145 NRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHN 213 (376)
T ss_dssp HHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHH
T ss_pred HHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHH
Confidence 9999988762 333333 8899999999999999999988888776 7788889999888 766444
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.52 E-value=2.2e-14 Score=122.84 Aligned_cols=89 Identities=17% Similarity=0.094 Sum_probs=79.5
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHH
Q 009704 60 IDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRI 139 (528)
Q Consensus 60 In~kD~p~G~TPLHlAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~ 139 (528)
....|. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||++
T Consensus 17 ~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 17 GSHMGS-DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp -----C-CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccccCC-ccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 455665 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhh
Q 009704 140 VASAARIRDF 149 (528)
Q Consensus 140 lA~l~~~~Df 149 (528)
+|+.....+.
T Consensus 96 ~A~~~~~~~~ 105 (110)
T 2zgd_A 96 ISIDNGNEDL 105 (110)
T ss_dssp HHHHHTCHHH
T ss_pred HHHHcCCHHH
Confidence 9998765543
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.47 E-value=4.6e-14 Score=120.76 Aligned_cols=85 Identities=18% Similarity=0.179 Sum_probs=79.6
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHH
Q 009704 63 RDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVAS 142 (528)
Q Consensus 63 kD~p~G~TPLHlAv~~G~~e~vklLL~~GAdvn~~n~~G~TpLh~A~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~ 142 (528)
+|. .|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+
T Consensus 5 ~d~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSK-DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSC-SSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 465 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhh
Q 009704 143 AARIRD 148 (528)
Q Consensus 143 l~~~~D 148 (528)
.....+
T Consensus 84 ~~~~~~ 89 (115)
T 2l6b_A 84 KNGHHE 89 (115)
T ss_dssp TTTCHH
T ss_pred HCCCHH
Confidence 765433
No 113
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.47 E-value=9.3e-14 Score=140.74 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=90.7
Q ss_pred hHHHHHHhccccc------cccccc------cCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Q 009704 44 DESLAAELQADAV------SAVIDR------RDVPGRETPLHLAVRL---RDPISAEILMAAGADWSLQNENGWSALQEA 108 (528)
Q Consensus 44 l~~~A~~~~~~~v------ga~In~------kD~p~G~TPLHlAv~~---G~~e~vklLL~~GAdvn~~n~~G~TpLh~A 108 (528)
++.++..++...+ |++++. .|. .|+||||+||.. |+.+++++||++|++++.+|..|+||||+|
T Consensus 155 L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~-~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A 233 (301)
T 2b0o_E 155 LWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQA-PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYA 233 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCS-CEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHH
T ss_pred HhhhhhccCHHHHHHHHhcCCcccccCCCcccCC-CCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence 4444444444333 788887 576 899999999997 899999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhhh
Q 009704 109 VCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (528)
Q Consensus 109 ~~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~D 148 (528)
+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 234 ~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~ 273 (301)
T 2b0o_E 234 ALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 273 (301)
T ss_dssp HHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999999999999999876544
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.43 E-value=2e-15 Score=158.18 Aligned_cols=113 Identities=12% Similarity=0.012 Sum_probs=87.0
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHH
Q 009704 3 DFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPI 82 (528)
Q Consensus 3 ~~Dk~G~TPLH~Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~e 82 (528)
..+..|.||||+||.+|+.+++++|+++|+++.. ++++ +. +.||||+||..|+.+
T Consensus 123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~---------------------~~i~--~~--~~TpLh~Aa~~G~~e 177 (376)
T 2aja_A 123 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM---------------------AMIQ--AE--NYHAFRLAAENGHLH 177 (376)
T ss_dssp --CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH---------------------HHHS--HH--HHHHHHHHHHTTCHH
T ss_pred HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccc---------------------cccC--CC--CCCHHHHHHHCCCHH
Confidence 4556788999999999999999999999764310 1222 22 278999999999999
Q ss_pred HHHHHHHcCCCCCC--cCCCCCcHHHHHH-HcCCHHHHHHHHHhCCChhHhhhcCCchHHHHHHhhhh
Q 009704 83 SAEILMAAGADWSL--QNENGWSALQEAV-CTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIR 147 (528)
Q Consensus 83 ~vklLL~~GAdvn~--~n~~G~TpLh~A~-~~g~~eiv~lLl~~g~~i~~~~~~g~tPl~lA~l~~~~ 147 (528)
+|++|+++|++++. .|..|+||||+|+ ..|+.+++++|+++|+ .+.||+++|+..+..
T Consensus 178 iv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~ 238 (376)
T 2aja_A 178 VLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEK 238 (376)
T ss_dssp HHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTT
T ss_pred HHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCH
Confidence 99999999988877 7888889999999 8899999998888653 256788777665443
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=23.54 E-value=2e+02 Score=29.89 Aligned_cols=62 Identities=23% Similarity=0.202 Sum_probs=38.8
Q ss_pred HHHcCCHHHHHHHHHcCCCCCcCCCCCchhHHHHHHhccccccccccccCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 009704 15 AVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISAEILMA 89 (528)
Q Consensus 15 Av~~g~~e~vk~LL~~ga~l~~~~~~~t~l~~~A~~~~~~~vga~In~kD~p~G~TPLHlAv~~G~~e~vklLL~ 89 (528)
.|..|+...|+.-|..|.+++..- |. ...+.-+ ..++.|. |.|-+|+|+++.+.+++.+|+.
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~l---t~-~e~~lln-------~~~af~~--g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQL---TA-DEVRLLN-------RPSAFDV--GYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCC---CH-HHHHHHC-------CTTTCCT--TCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhccc---CH-HHHHHhC-------CCccccc--CchhhhhhhhhhhhhHHHHhhh
Confidence 356799999999999887665311 10 0111110 1233453 7888888888888888887776
Done!