Query 009708
Match_columns 528
No_of_seqs 462 out of 3386
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 11:15:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009708.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009708hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yxl_A PH0851 protein, 450AA l 100.0 1.8E-77 6.1E-82 641.3 42.4 432 58-527 11-449 (450)
2 1sqg_A SUN protein, FMU protei 100.0 1.5E-75 5E-80 623.1 40.8 423 59-527 6-429 (429)
3 1ixk_A Methyltransferase; open 100.0 2.9E-55 1E-59 448.4 33.4 303 218-527 5-315 (315)
4 3m6w_A RRNA methylase; rRNA me 100.0 7.9E-54 2.7E-58 455.9 28.0 290 228-527 1-300 (464)
5 2frx_A Hypothetical protein YE 100.0 1.2E-53 4.1E-58 458.4 29.0 298 226-527 5-311 (479)
6 3m4x_A NOL1/NOP2/SUN family pr 100.0 1.6E-53 5.3E-58 453.2 26.1 288 227-527 6-303 (456)
7 2b9e_A NOL1/NOP2/SUN domain fa 100.0 1.8E-49 6.3E-54 403.6 27.5 270 254-527 7-301 (309)
8 4fzv_A Putative methyltransfer 100.0 8.9E-47 3E-51 389.4 23.2 295 222-527 17-358 (359)
9 3ajd_A Putative methyltransfer 100.0 1.4E-43 4.9E-48 354.9 23.9 266 250-527 2-274 (274)
10 1tzv_A NUSB protein, N utiliza 100.0 2.2E-29 7.5E-34 227.1 13.1 128 58-203 6-135 (142)
11 3d3b_A Protein NUSB, N utiliza 100.0 1.4E-29 4.7E-34 228.2 10.5 127 58-202 9-136 (141)
12 3r2d_A Protein NUSB, N utiliza 100.0 3.1E-29 1E-33 227.5 9.3 130 58-203 6-136 (149)
13 1eyv_A NUSB protein, N-utilizi 99.9 3.2E-28 1.1E-32 222.5 8.5 132 58-203 11-143 (156)
14 4dmg_A Putative uncharacterize 99.8 5.6E-19 1.9E-23 184.9 14.4 161 309-489 190-353 (393)
15 3u81_A Catechol O-methyltransf 99.7 7.5E-18 2.6E-22 162.2 12.9 169 318-526 41-214 (221)
16 3tfw_A Putative O-methyltransf 99.7 1.8E-17 6.2E-22 162.8 14.8 165 321-527 49-227 (248)
17 3lpm_A Putative methyltransfer 99.7 1.3E-16 4.4E-21 157.5 18.8 166 314-489 20-195 (259)
18 1wxx_A TT1595, hypothetical pr 99.7 1.7E-17 5.7E-22 173.4 12.6 160 310-490 188-353 (382)
19 3duw_A OMT, O-methyltransferas 99.7 1.9E-17 6.3E-22 159.2 11.8 166 320-526 43-223 (223)
20 2as0_A Hypothetical protein PH 99.7 5.2E-17 1.8E-21 170.4 13.8 164 310-490 194-363 (396)
21 3id6_C Fibrillarin-like rRNA/T 99.7 6.6E-17 2.2E-21 157.1 13.5 132 332-492 73-213 (232)
22 3c0k_A UPF0064 protein YCCW; P 99.7 2.7E-17 9.2E-22 172.6 10.4 164 309-490 197-367 (396)
23 2b3t_A Protein methyltransfera 99.7 7.7E-17 2.6E-21 160.6 12.0 159 314-484 86-253 (276)
24 3v97_A Ribosomal RNA large sub 99.7 4.8E-17 1.6E-21 182.1 11.3 152 310-477 517-669 (703)
25 2b78_A Hypothetical protein SM 99.7 7E-17 2.4E-21 168.8 11.0 158 310-484 189-352 (385)
26 3r3h_A O-methyltransferase, SA 99.7 3.9E-17 1.3E-21 159.9 7.6 127 317-468 42-173 (242)
27 1nv8_A HEMK protein; class I a 99.7 8.1E-17 2.8E-21 161.5 8.5 216 230-463 20-247 (284)
28 2qm3_A Predicted methyltransfe 99.7 1.7E-14 5.8E-19 150.1 25.1 251 172-482 25-296 (373)
29 2gpy_A O-methyltransferase; st 99.7 6.4E-16 2.2E-20 149.7 13.4 131 313-469 32-164 (233)
30 2igt_A SAM dependent methyltra 99.7 2.3E-16 8E-21 161.6 10.5 145 310-469 127-277 (332)
31 3c3y_A Pfomt, O-methyltransfer 99.6 4.2E-16 1.4E-20 152.0 11.3 126 319-469 54-185 (237)
32 1yb2_A Hypothetical protein TA 99.6 2E-17 6.9E-22 164.8 1.8 203 249-490 28-232 (275)
33 3tma_A Methyltransferase; thum 99.6 6.3E-15 2.1E-19 152.2 18.4 146 321-490 189-334 (354)
34 3dr5_A Putative O-methyltransf 99.6 1.6E-15 5.5E-20 146.5 13.1 137 330-491 51-200 (221)
35 3mb5_A SAM-dependent methyltra 99.6 2.3E-15 7.8E-20 147.6 13.3 142 312-485 70-211 (255)
36 1sui_A Caffeoyl-COA O-methyltr 99.6 1.7E-15 5.9E-20 148.7 11.9 126 317-467 61-192 (247)
37 3ntv_A MW1564 protein; rossman 99.6 4.7E-15 1.6E-19 143.9 14.4 129 314-468 50-179 (232)
38 2dul_A N(2),N(2)-dimethylguano 99.6 1.7E-16 5.9E-21 165.2 4.2 162 335-527 47-233 (378)
39 3njr_A Precorrin-6Y methylase; 99.6 7E-15 2.4E-19 140.0 14.7 138 320-492 40-177 (204)
40 2frn_A Hypothetical protein PH 99.6 2.4E-15 8.3E-20 150.2 11.8 135 322-489 114-251 (278)
41 3c3p_A Methyltransferase; NP_9 99.6 2.4E-15 8.2E-20 143.3 10.6 126 318-469 39-164 (210)
42 3mti_A RRNA methylase; SAM-dep 99.6 5.2E-15 1.8E-19 137.7 12.6 136 333-485 20-157 (185)
43 3tr6_A O-methyltransferase; ce 99.6 2.5E-15 8.7E-20 144.3 10.8 126 318-468 47-177 (225)
44 2ozv_A Hypothetical protein AT 99.6 6.2E-15 2.1E-19 145.8 13.8 153 323-484 24-185 (260)
45 3eey_A Putative rRNA methylase 99.6 5.1E-15 1.7E-19 139.2 11.9 141 332-485 19-161 (197)
46 3e05_A Precorrin-6Y C5,15-meth 99.6 2.4E-14 8.1E-19 135.6 16.2 139 314-484 20-158 (204)
47 1i1n_A Protein-L-isoaspartate 99.6 1.1E-14 3.8E-19 140.0 13.7 127 318-473 57-190 (226)
48 1o54_A SAM-dependent O-methylt 99.6 2.7E-14 9.2E-19 142.1 16.2 136 323-491 100-235 (277)
49 3k6r_A Putative transferase PH 99.6 6.8E-15 2.3E-19 146.6 11.3 122 333-484 123-247 (278)
50 3axs_A Probable N(2),N(2)-dime 99.6 6.7E-15 2.3E-19 153.4 9.9 110 334-470 51-162 (392)
51 3evz_A Methyltransferase; NYSG 99.6 2E-14 6.9E-19 138.5 12.5 148 333-491 53-202 (230)
52 3bt7_A TRNA (uracil-5-)-methyl 99.5 2.7E-14 9.4E-19 148.3 13.2 149 327-527 206-369 (369)
53 3p9n_A Possible methyltransfer 99.5 5.7E-14 2E-18 131.4 14.0 111 334-468 43-156 (189)
54 2pwy_A TRNA (adenine-N(1)-)-me 99.5 5.5E-14 1.9E-18 137.6 13.7 139 319-490 80-219 (258)
55 3hm2_A Precorrin-6Y C5,15-meth 99.5 1.1E-13 3.9E-18 127.3 14.8 129 325-484 15-143 (178)
56 2esr_A Methyltransferase; stru 99.5 5.2E-14 1.8E-18 130.0 12.4 118 327-469 22-142 (177)
57 1i9g_A Hypothetical protein RV 99.5 8.6E-14 2.9E-18 138.2 14.8 126 315-468 79-206 (280)
58 3cbg_A O-methyltransferase; cy 99.5 2.4E-14 8.4E-19 138.9 10.5 125 320-469 57-186 (232)
59 2avd_A Catechol-O-methyltransf 99.5 5.2E-14 1.8E-18 135.5 12.2 125 319-468 53-182 (229)
60 1inl_A Spermidine synthase; be 99.5 1.7E-14 6E-19 145.3 9.2 137 335-489 90-231 (296)
61 2ift_A Putative methylase HI07 99.5 3.3E-14 1.1E-18 134.9 10.5 110 335-469 53-167 (201)
62 3a27_A TYW2, uncharacterized p 99.5 6.6E-14 2.2E-18 139.4 12.6 122 317-469 101-222 (272)
63 3dou_A Ribosomal RNA large sub 99.5 7.4E-14 2.5E-18 131.7 11.3 123 333-484 23-155 (191)
64 4dzr_A Protein-(glutamine-N5) 99.5 1.5E-14 5.2E-19 136.9 6.0 143 334-482 29-178 (215)
65 2bm8_A Cephalosporin hydroxyla 99.5 5.5E-14 1.9E-18 137.0 9.9 147 315-492 60-216 (236)
66 3gdh_A Trimethylguanosine synt 99.5 7.6E-14 2.6E-18 135.5 10.9 92 325-421 68-159 (241)
67 3kkz_A Uncharacterized protein 99.5 6.2E-14 2.1E-18 138.4 9.7 128 333-486 44-172 (267)
68 4df3_A Fibrillarin-like rRNA/T 99.5 9.4E-14 3.2E-18 134.7 10.3 108 331-465 73-182 (233)
69 2fpo_A Methylase YHHF; structu 99.5 1.4E-13 4.6E-18 130.7 11.0 108 335-468 54-163 (202)
70 2yx1_A Hypothetical protein MJ 99.5 9.3E-14 3.2E-18 142.5 10.6 102 334-469 194-295 (336)
71 2hnk_A SAM-dependent O-methylt 99.5 3E-13 1E-17 131.5 12.3 126 319-469 44-185 (239)
72 1dus_A MJ0882; hypothetical pr 99.5 1.2E-12 4E-17 121.6 15.8 121 322-468 39-160 (194)
73 2b25_A Hypothetical protein; s 99.5 7.7E-13 2.6E-17 135.4 15.6 125 314-465 84-219 (336)
74 4gek_A TRNA (CMO5U34)-methyltr 99.4 3.8E-13 1.3E-17 133.1 12.4 124 321-469 58-182 (261)
75 2fhp_A Methylase, putative; al 99.4 2.5E-13 8.7E-18 125.9 10.2 113 333-470 42-159 (187)
76 4dcm_A Ribosomal RNA large sub 99.4 5.4E-13 1.9E-17 138.8 13.0 131 321-471 208-340 (375)
77 3dxy_A TRNA (guanine-N(7)-)-me 99.4 4.3E-13 1.5E-17 129.1 11.3 138 335-491 34-173 (218)
78 3kr9_A SAM-dependent methyltra 99.4 2.2E-12 7.5E-17 124.4 16.0 127 333-491 13-139 (225)
79 1xdz_A Methyltransferase GIDB; 99.4 5.8E-13 2E-17 129.6 11.9 128 333-490 68-197 (240)
80 2yvl_A TRMI protein, hypotheti 99.4 9.7E-13 3.3E-17 127.9 13.4 130 321-484 77-206 (248)
81 3lbf_A Protein-L-isoaspartate 99.4 6.1E-13 2.1E-17 126.2 11.6 121 314-467 56-176 (210)
82 3tm4_A TRNA (guanine N2-)-meth 99.4 3.5E-13 1.2E-17 140.1 10.6 141 324-490 207-347 (373)
83 3f4k_A Putative methyltransfer 99.4 8E-13 2.7E-17 129.2 12.5 113 332-470 43-155 (257)
84 3fpf_A Mtnas, putative unchara 99.4 1.6E-12 5.5E-17 130.0 14.8 106 330-465 117-222 (298)
85 2fca_A TRNA (guanine-N(7)-)-me 99.4 6.7E-13 2.3E-17 127.0 11.6 117 334-466 37-154 (213)
86 1nt2_A Fibrillarin-like PRE-rR 99.4 2.1E-12 7.3E-17 123.4 14.4 107 331-465 53-161 (210)
87 1o9g_A RRNA methyltransferase; 99.4 3.9E-13 1.3E-17 131.6 9.4 122 333-467 49-216 (250)
88 1yzh_A TRNA (guanine-N(7)-)-me 99.4 1.2E-12 4E-17 125.0 12.4 117 334-466 40-157 (214)
89 3hem_A Cyclopropane-fatty-acyl 99.4 2.6E-12 8.8E-17 129.2 15.4 127 326-471 63-189 (302)
90 3g89_A Ribosomal RNA small sub 99.4 7.4E-13 2.5E-17 130.1 10.9 122 333-483 78-201 (249)
91 3lec_A NADB-rossmann superfami 99.4 2.6E-12 9E-17 124.1 14.6 127 333-491 19-145 (230)
92 1l3i_A Precorrin-6Y methyltran 99.4 1.7E-12 5.8E-17 120.3 12.8 134 319-484 17-150 (192)
93 3dh0_A SAM dependent methyltra 99.4 3.8E-12 1.3E-16 121.3 14.6 142 325-491 27-177 (219)
94 3gnl_A Uncharacterized protein 99.4 5.9E-12 2E-16 122.6 15.4 126 333-490 19-144 (244)
95 2yxd_A Probable cobalt-precorr 99.4 1.5E-11 5E-16 113.1 17.0 135 319-491 19-153 (183)
96 2f8l_A Hypothetical protein LM 99.4 3.6E-13 1.2E-17 138.5 6.7 160 315-484 106-276 (344)
97 1nkv_A Hypothetical protein YJ 99.4 2.6E-12 8.9E-17 125.4 12.5 118 324-467 25-142 (256)
98 3dmg_A Probable ribosomal RNA 99.4 2.3E-12 8E-17 134.2 12.8 115 334-471 232-346 (381)
99 3dlc_A Putative S-adenosyl-L-m 99.4 4.2E-12 1.4E-16 120.3 13.5 120 325-470 34-153 (219)
100 2vdv_E TRNA (guanine-N(7)-)-me 99.4 1.5E-12 5E-17 127.3 10.5 139 333-490 47-195 (246)
101 1dl5_A Protein-L-isoaspartate 99.4 3.1E-12 1.1E-16 129.9 13.3 117 320-466 60-176 (317)
102 2h00_A Methyltransferase 10 do 99.4 4.4E-12 1.5E-16 124.2 13.5 85 335-420 65-154 (254)
103 3grz_A L11 mtase, ribosomal pr 99.4 1.8E-12 6.3E-17 122.5 10.1 124 333-491 58-181 (205)
104 2okc_A Type I restriction enzy 99.4 5.8E-13 2E-17 141.8 7.3 144 314-467 150-309 (445)
105 1wy7_A Hypothetical protein PH 99.4 5.3E-12 1.8E-16 119.4 13.0 126 332-491 46-171 (207)
106 1xxl_A YCGJ protein; structura 99.3 4.9E-12 1.7E-16 122.8 12.9 122 320-468 6-127 (239)
107 1ws6_A Methyltransferase; stru 99.3 1.4E-12 4.7E-17 119.0 8.4 107 335-470 41-152 (171)
108 3vc1_A Geranyl diphosphate 2-C 99.3 2.3E-12 7.7E-17 130.4 10.5 122 320-467 101-223 (312)
109 2plw_A Ribosomal RNA methyltra 99.3 6E-12 2E-16 118.4 12.5 126 333-484 20-170 (201)
110 3ofk_A Nodulation protein S; N 99.3 6.5E-12 2.2E-16 119.5 12.6 116 323-465 39-154 (216)
111 2yxe_A Protein-L-isoaspartate 99.3 5.5E-12 1.9E-16 120.0 12.0 124 314-467 56-179 (215)
112 3ckk_A TRNA (guanine-N(7)-)-me 99.3 4.1E-12 1.4E-16 123.6 11.2 139 334-491 45-191 (235)
113 3adn_A Spermidine synthase; am 99.3 5.6E-12 1.9E-16 126.8 12.4 135 335-488 83-223 (294)
114 1vl5_A Unknown conserved prote 99.3 6.3E-12 2.1E-16 123.3 12.3 130 310-466 12-141 (260)
115 2pbf_A Protein-L-isoaspartate 99.3 3.8E-12 1.3E-16 122.3 10.5 111 325-465 68-193 (227)
116 1jg1_A PIMT;, protein-L-isoasp 99.3 4E-12 1.4E-16 123.2 10.4 124 312-467 68-191 (235)
117 2xvm_A Tellurite resistance pr 99.3 1.1E-11 3.8E-16 115.8 13.1 115 325-465 22-136 (199)
118 2pjd_A Ribosomal RNA small sub 99.3 3.5E-12 1.2E-16 131.0 10.5 128 321-471 182-309 (343)
119 1g8a_A Fibrillarin-like PRE-rR 99.3 4.6E-12 1.6E-16 121.8 10.5 106 333-465 71-178 (227)
120 1mjf_A Spermidine synthase; sp 99.3 1.9E-12 6.5E-17 129.4 8.0 128 334-483 74-212 (281)
121 3ldg_A Putative uncharacterize 99.3 2E-11 7E-16 127.1 15.6 139 310-466 163-344 (384)
122 3orh_A Guanidinoacetate N-meth 99.3 1.9E-12 6.4E-17 126.0 7.3 112 333-465 58-170 (236)
123 2h1r_A Dimethyladenosine trans 99.3 1.9E-12 6.6E-17 130.5 7.6 131 317-468 24-162 (299)
124 3bus_A REBM, methyltransferase 99.3 1.2E-11 4.3E-16 121.9 13.3 119 324-467 50-168 (273)
125 2ipx_A RRNA 2'-O-methyltransfe 99.3 8.5E-12 2.9E-16 120.6 11.8 107 331-464 73-181 (233)
126 3uwp_A Histone-lysine N-methyl 99.3 1.2E-11 4.3E-16 128.2 13.6 117 326-466 164-289 (438)
127 2fk8_A Methoxy mycolic acid sy 99.3 1.6E-11 5.4E-16 124.3 14.0 119 326-470 81-199 (318)
128 2ar0_A M.ecoki, type I restric 99.3 3.3E-12 1.1E-16 139.0 9.4 162 314-483 148-332 (541)
129 2ih2_A Modification methylase 99.3 5.5E-12 1.9E-16 132.6 10.9 155 314-484 18-184 (421)
130 3jwh_A HEN1; methyltransferase 99.3 1.7E-11 5.8E-16 116.9 13.1 120 325-466 19-142 (217)
131 3ldu_A Putative methylase; str 99.3 3.6E-11 1.2E-15 125.5 16.3 139 310-466 164-345 (385)
132 1r18_A Protein-L-isoaspartate( 99.3 4.9E-12 1.7E-16 121.8 8.9 122 315-466 62-195 (227)
133 1vbf_A 231AA long hypothetical 99.3 8.5E-12 2.9E-16 120.0 10.6 120 314-468 49-168 (231)
134 1uwv_A 23S rRNA (uracil-5-)-me 99.3 1.3E-11 4.5E-16 130.8 13.0 88 327-418 278-368 (433)
135 1kpg_A CFA synthase;, cyclopro 99.3 2.4E-11 8.2E-16 120.9 13.9 118 326-469 55-172 (287)
136 3ocj_A Putative exported prote 99.3 4.6E-12 1.6E-16 127.7 8.7 114 333-467 116-229 (305)
137 3k0b_A Predicted N6-adenine-sp 99.3 3.7E-11 1.3E-15 125.6 15.6 125 324-466 190-351 (393)
138 3p2e_A 16S rRNA methylase; met 99.3 5.4E-12 1.8E-16 122.0 8.4 113 334-465 23-139 (225)
139 1pjz_A Thiopurine S-methyltran 99.3 5.6E-12 1.9E-16 119.6 8.3 114 331-468 18-143 (203)
140 1fbn_A MJ fibrillarin homologu 99.3 9.5E-12 3.3E-16 120.2 9.6 106 331-464 70-177 (230)
141 3lkd_A Type I restriction-modi 99.3 8.5E-12 2.9E-16 135.4 9.7 172 313-486 195-381 (542)
142 1ej0_A FTSJ; methyltransferase 99.3 1.2E-11 4E-16 112.7 9.2 125 333-483 20-151 (180)
143 2o07_A Spermidine synthase; st 99.3 1.1E-11 3.7E-16 125.3 9.7 131 334-483 94-228 (304)
144 1jsx_A Glucose-inhibited divis 99.3 1.9E-11 6.7E-16 115.4 10.8 103 335-467 65-167 (207)
145 2nxc_A L11 mtase, ribosomal pr 99.3 2.1E-11 7.3E-16 119.8 11.3 123 333-491 118-240 (254)
146 2jjq_A Uncharacterized RNA met 99.2 2.3E-11 7.7E-16 128.5 12.2 78 333-418 288-365 (425)
147 2o57_A Putative sarcosine dime 99.2 1.8E-11 6E-16 122.5 10.8 118 325-467 68-189 (297)
148 3jwg_A HEN1, methyltransferase 99.2 3.7E-11 1.3E-15 114.6 12.4 121 325-467 19-143 (219)
149 2nyu_A Putative ribosomal RNA 99.2 5.2E-11 1.8E-15 111.3 12.7 112 333-467 20-147 (196)
150 3dtn_A Putative methyltransfer 99.2 4.9E-11 1.7E-15 114.8 12.9 119 326-470 34-153 (234)
151 3gu3_A Methyltransferase; alph 99.2 1.8E-11 6.1E-16 122.1 10.1 117 325-467 12-128 (284)
152 3m70_A Tellurite resistance pr 99.2 3.1E-11 1.1E-15 120.1 11.7 109 329-464 114-222 (286)
153 1iy9_A Spermidine synthase; ro 99.2 3.3E-11 1.1E-15 120.0 11.8 131 335-484 75-209 (275)
154 3khk_A Type I restriction-modi 99.2 2.7E-12 9.2E-17 139.5 4.2 173 313-486 223-419 (544)
155 4htf_A S-adenosylmethionine-de 99.2 3.1E-11 1.1E-15 120.1 11.6 107 335-466 68-174 (285)
156 1zq9_A Probable dimethyladenos 99.2 9.6E-12 3.3E-16 124.5 7.8 94 319-418 12-105 (285)
157 1ri5_A MRNA capping enzyme; me 99.2 2.2E-11 7.6E-16 121.3 10.1 115 333-467 62-176 (298)
158 2gb4_A Thiopurine S-methyltran 99.2 3.7E-11 1.2E-15 118.2 11.5 136 332-492 65-224 (252)
159 3g5t_A Trans-aconitate 3-methy 99.2 2.9E-11 1E-15 121.3 10.9 111 334-467 35-151 (299)
160 2kw5_A SLR1183 protein; struct 99.2 5.7E-11 2E-15 111.7 12.2 106 333-467 28-133 (202)
161 3hnr_A Probable methyltransfer 99.2 8.2E-11 2.8E-15 112.0 12.6 112 331-472 41-152 (220)
162 2pt6_A Spermidine synthase; tr 99.2 4.9E-11 1.7E-15 121.4 11.5 115 334-467 115-232 (321)
163 3mgg_A Methyltransferase; NYSG 99.2 7.4E-11 2.5E-15 116.6 12.6 116 325-465 27-142 (276)
164 3r0q_C Probable protein argini 99.2 1.7E-11 6E-16 127.5 8.1 114 330-467 58-171 (376)
165 2fyt_A Protein arginine N-meth 99.2 2.8E-11 9.7E-16 124.2 9.5 119 326-467 55-173 (340)
166 1ve3_A Hypothetical protein PH 99.2 8.1E-11 2.8E-15 112.4 12.2 108 334-467 37-144 (227)
167 3lcc_A Putative methyl chlorid 99.2 5.2E-11 1.8E-15 114.9 10.8 130 336-491 67-203 (235)
168 2y1w_A Histone-arginine methyl 99.2 3E-11 1E-15 124.3 9.6 118 327-469 42-159 (348)
169 3bkx_A SAM-dependent methyltra 99.2 1.1E-10 3.7E-15 115.2 13.3 124 323-469 31-163 (275)
170 3q87_B N6 adenine specific DNA 99.2 3E-11 1E-15 111.3 8.4 137 321-491 7-145 (170)
171 2p41_A Type II methyltransfera 99.2 1.9E-11 6.4E-16 123.6 7.4 107 333-465 80-191 (305)
172 3q7e_A Protein arginine N-meth 99.2 1.2E-11 4.2E-16 127.3 6.2 113 333-468 64-176 (349)
173 3ujc_A Phosphoethanolamine N-m 99.2 4.9E-11 1.7E-15 116.6 10.0 116 326-467 46-161 (266)
174 1zx0_A Guanidinoacetate N-meth 99.2 2.1E-11 7.2E-16 118.0 7.3 114 333-467 58-172 (236)
175 3e23_A Uncharacterized protein 99.2 2.5E-10 8.6E-15 108.1 14.6 126 333-491 41-178 (211)
176 2b2c_A Spermidine synthase; be 99.2 3.8E-11 1.3E-15 121.8 9.3 130 335-483 108-241 (314)
177 3iv6_A Putative Zn-dependent a 99.2 1.2E-10 4.1E-15 114.9 12.6 117 323-466 33-149 (261)
178 3ou2_A SAM-dependent methyltra 99.2 1.4E-10 4.6E-15 110.0 12.3 113 326-468 37-149 (218)
179 2p35_A Trans-aconitate 2-methy 99.2 1.2E-10 4.2E-15 113.5 12.1 117 320-467 18-134 (259)
180 4fsd_A Arsenic methyltransfera 99.2 6.9E-11 2.3E-15 123.2 10.6 112 333-466 81-204 (383)
181 3cgg_A SAM-dependent methyltra 99.2 7.3E-10 2.5E-14 102.6 16.3 135 325-492 38-172 (195)
182 3g07_A 7SK snRNA methylphospha 99.2 7E-11 2.4E-15 118.4 10.0 116 335-467 46-222 (292)
183 1u2z_A Histone-lysine N-methyl 99.2 3E-10 1E-14 119.7 15.1 115 327-465 234-359 (433)
184 2pxx_A Uncharacterized protein 99.2 6.2E-11 2.1E-15 112.0 9.0 122 334-468 41-162 (215)
185 1m6y_A S-adenosyl-methyltransf 99.2 5.5E-11 1.9E-15 119.8 8.8 90 326-418 17-110 (301)
186 1wzn_A SAM-dependent methyltra 99.1 2.3E-10 8E-15 111.3 12.8 108 332-465 38-145 (252)
187 3sm3_A SAM-dependent methyltra 99.1 1.2E-10 3.9E-15 111.7 10.4 112 334-468 29-144 (235)
188 1g6q_1 HnRNP arginine N-methyl 99.1 3.5E-11 1.2E-15 122.9 7.0 113 332-467 35-147 (328)
189 3bwc_A Spermidine synthase; SA 99.1 9.1E-11 3.1E-15 118.5 10.0 131 334-483 94-229 (304)
190 3g2m_A PCZA361.24; SAM-depende 99.1 4.9E-11 1.7E-15 119.6 7.7 119 326-469 74-194 (299)
191 3mq2_A 16S rRNA methyltransfer 99.1 4.2E-11 1.4E-15 114.2 6.5 114 330-464 22-139 (218)
192 2i7c_A Spermidine synthase; tr 99.1 1.8E-10 6E-15 115.2 11.3 131 334-483 77-211 (283)
193 2qfm_A Spermine synthase; sper 99.1 1E-10 3.5E-15 119.7 9.6 136 335-484 188-333 (364)
194 4hc4_A Protein arginine N-meth 99.1 5.1E-11 1.7E-15 123.4 7.1 111 334-468 82-192 (376)
195 1xj5_A Spermidine synthase 1; 99.1 1.7E-10 5.8E-15 118.0 10.9 117 333-468 118-238 (334)
196 2p8j_A S-adenosylmethionine-de 99.1 1.4E-10 4.6E-15 109.5 9.4 111 333-468 21-131 (209)
197 1uir_A Polyamine aminopropyltr 99.1 1.6E-10 5.3E-15 117.3 10.4 117 335-467 77-197 (314)
198 1y8c_A S-adenosylmethionine-de 99.1 2.3E-10 7.9E-15 110.3 11.0 107 335-466 37-143 (246)
199 3v97_A Ribosomal RNA large sub 99.1 3.1E-10 1.1E-14 127.0 13.5 127 324-465 179-347 (703)
200 3g5l_A Putative S-adenosylmeth 99.1 2E-10 6.7E-15 112.0 10.5 111 327-466 36-146 (253)
201 2vdw_A Vaccinia virus capping 99.1 1.9E-10 6.5E-15 116.1 10.6 112 335-467 48-171 (302)
202 3fzg_A 16S rRNA methylase; met 99.1 5.7E-11 1.9E-15 110.8 6.0 109 334-469 48-157 (200)
203 3d2l_A SAM-dependent methyltra 99.1 2.5E-10 8.5E-15 110.1 10.8 108 334-467 32-139 (243)
204 3i9f_A Putative type 11 methyl 99.1 1.9E-10 6.7E-15 104.9 9.4 125 330-492 12-145 (170)
205 3bzb_A Uncharacterized protein 99.1 5.9E-10 2E-14 111.2 13.4 134 333-492 77-234 (281)
206 3e8s_A Putative SAM dependent 99.1 5.3E-10 1.8E-14 106.3 12.4 105 330-467 47-154 (227)
207 1xtp_A LMAJ004091AAA; SGPP, st 99.1 3.8E-10 1.3E-14 109.7 11.6 113 328-466 86-198 (254)
208 3h2b_A SAM-dependent methyltra 99.1 5.6E-10 1.9E-14 104.9 12.2 126 336-492 42-179 (203)
209 2ex4_A Adrenal gland protein A 99.1 2.4E-10 8.1E-15 110.7 9.7 132 335-491 79-221 (241)
210 3m33_A Uncharacterized protein 99.1 2E-10 7E-15 110.4 9.1 93 334-463 47-140 (226)
211 3b3j_A Histone-arginine methyl 99.1 9.9E-11 3.4E-15 125.5 7.3 113 330-467 153-265 (480)
212 3s1s_A Restriction endonucleas 99.1 4.1E-10 1.4E-14 124.8 12.3 167 314-485 294-488 (878)
213 3thr_A Glycine N-methyltransfe 99.1 3.4E-10 1.2E-14 112.8 10.7 126 325-467 47-177 (293)
214 3ufb_A Type I restriction-modi 99.1 2.8E-10 9.5E-15 123.4 10.8 162 313-484 195-383 (530)
215 3ccf_A Cyclopropane-fatty-acyl 99.1 2.5E-10 8.6E-15 113.2 9.1 111 324-467 46-156 (279)
216 1ne2_A Hypothetical protein TA 99.1 4.4E-10 1.5E-14 105.7 10.3 74 332-417 48-121 (200)
217 3gjy_A Spermidine synthase; AP 99.1 4.4E-10 1.5E-14 113.6 10.9 132 338-489 92-225 (317)
218 2r6z_A UPF0341 protein in RSP 99.1 7.4E-11 2.5E-15 116.4 4.9 91 324-417 72-172 (258)
219 2yqz_A Hypothetical protein TT 99.1 3.7E-10 1.3E-14 110.3 9.9 105 332-464 36-140 (263)
220 3bkw_A MLL3908 protein, S-aden 99.1 4.1E-10 1.4E-14 108.6 10.0 111 326-465 34-144 (243)
221 2wa2_A Non-structural protein 99.1 9E-11 3.1E-15 116.9 5.4 111 333-467 80-195 (276)
222 2oxt_A Nucleoside-2'-O-methylt 99.0 7.2E-11 2.4E-15 116.9 4.1 112 332-467 71-187 (265)
223 1yub_A Ermam, rRNA methyltrans 99.0 3.5E-12 1.2E-16 124.7 -6.0 128 317-465 11-145 (245)
224 3ggd_A SAM-dependent methyltra 99.0 7.5E-10 2.6E-14 107.3 10.2 109 333-468 54-166 (245)
225 1qzz_A RDMB, aclacinomycin-10- 99.0 1.4E-09 4.8E-14 112.4 12.9 118 324-466 171-288 (374)
226 3dli_A Methyltransferase; PSI- 99.0 7E-10 2.4E-14 107.3 10.0 103 333-467 39-142 (240)
227 2xyq_A Putative 2'-O-methyl tr 99.0 2.8E-10 9.4E-15 113.9 7.2 122 331-484 59-187 (290)
228 3pfg_A N-methyltransferase; N, 99.0 4E-10 1.4E-14 110.5 8.2 103 334-465 49-151 (263)
229 2a14_A Indolethylamine N-methy 99.0 1.2E-10 4E-15 114.9 4.3 115 332-466 52-198 (263)
230 3l8d_A Methyltransferase; stru 99.0 9.3E-10 3.2E-14 106.1 10.4 104 334-467 52-155 (242)
231 2p7i_A Hypothetical protein; p 99.0 1.3E-10 4.5E-15 112.0 4.4 102 334-467 41-143 (250)
232 1x19_A CRTF-related protein; m 99.0 5.2E-09 1.8E-13 107.7 16.6 122 323-469 178-299 (359)
233 4hg2_A Methyltransferase type 99.0 5E-10 1.7E-14 110.4 8.1 114 335-482 39-154 (257)
234 3bxo_A N,N-dimethyltransferase 99.0 1.6E-09 5.5E-14 104.1 11.5 106 334-468 39-144 (239)
235 3ege_A Putative methyltransfer 99.0 6E-10 2E-14 109.5 8.5 110 324-467 23-132 (261)
236 2r3s_A Uncharacterized protein 99.0 1.2E-09 4.2E-14 111.0 11.1 120 326-469 154-275 (335)
237 3ll7_A Putative methyltransfer 99.0 3.6E-10 1.2E-14 118.1 7.1 81 335-419 93-176 (410)
238 3mcz_A O-methyltransferase; ad 99.0 2E-09 7E-14 110.3 12.7 120 329-470 172-292 (352)
239 3bgv_A MRNA CAP guanine-N7 met 99.0 1.3E-09 4.6E-14 109.9 11.0 112 335-467 34-157 (313)
240 3gru_A Dimethyladenosine trans 99.0 1.7E-09 5.7E-14 108.6 11.0 94 317-417 32-125 (295)
241 3gwz_A MMCR; methyltransferase 99.0 8.9E-09 3.1E-13 106.6 16.8 120 326-470 193-312 (369)
242 3dp7_A SAM-dependent methyltra 99.0 4.7E-09 1.6E-13 108.4 14.6 115 334-470 178-292 (363)
243 2oyr_A UPF0341 protein YHIQ; a 99.0 6.8E-10 2.3E-14 109.3 7.5 92 323-417 74-175 (258)
244 2cmg_A Spermidine synthase; tr 99.0 1.3E-09 4.5E-14 107.7 9.5 100 335-468 72-174 (262)
245 1tw3_A COMT, carminomycin 4-O- 99.0 4.4E-09 1.5E-13 108.2 13.7 118 325-467 173-290 (360)
246 2i62_A Nicotinamide N-methyltr 98.9 2.7E-10 9.2E-15 111.4 3.8 114 333-466 54-199 (265)
247 2gs9_A Hypothetical protein TT 98.9 2E-09 6.7E-14 101.8 9.5 100 335-468 36-135 (211)
248 3htx_A HEN1; HEN1, small RNA m 98.9 3.9E-09 1.3E-13 117.3 13.0 119 326-467 712-836 (950)
249 2ip2_A Probable phenazine-spec 98.9 2.8E-09 9.6E-14 108.5 11.0 119 325-469 158-276 (334)
250 3i53_A O-methyltransferase; CO 98.9 6.5E-09 2.2E-13 105.8 13.7 114 332-470 166-279 (332)
251 3cvo_A Methyltransferase-like 98.9 4.1E-09 1.4E-13 99.7 10.2 115 335-482 30-169 (202)
252 2aot_A HMT, histamine N-methyl 98.9 3.2E-09 1.1E-13 106.1 10.0 113 333-467 50-174 (292)
253 2avn_A Ubiquinone/menaquinone 98.9 1.8E-09 6.1E-14 105.9 7.7 108 326-467 47-154 (260)
254 3tqs_A Ribosomal RNA small sub 98.9 2.8E-09 9.6E-14 104.8 7.9 87 323-416 17-106 (255)
255 1qam_A ERMC' methyltransferase 98.9 7.1E-09 2.4E-13 101.2 10.1 94 317-417 12-105 (244)
256 3fut_A Dimethyladenosine trans 98.9 5E-09 1.7E-13 103.9 9.0 88 322-417 34-121 (271)
257 1p91_A Ribosomal RNA large sub 98.8 5E-09 1.7E-13 103.0 8.6 97 334-467 84-180 (269)
258 2g72_A Phenylethanolamine N-me 98.8 3.6E-09 1.2E-13 105.4 7.1 111 335-465 71-215 (289)
259 2qe6_A Uncharacterized protein 98.8 6.3E-08 2.2E-12 96.1 15.8 110 335-468 77-199 (274)
260 1vlm_A SAM-dependent methyltra 98.8 1.3E-08 4.3E-13 97.1 10.2 94 336-467 48-141 (219)
261 3hp7_A Hemolysin, putative; st 98.8 1.3E-08 4.6E-13 101.6 10.7 98 335-464 85-184 (291)
262 3cc8_A Putative methyltransfer 98.8 6.6E-09 2.3E-13 98.8 8.1 107 327-467 25-132 (230)
263 3opn_A Putative hemolysin; str 98.8 3.9E-09 1.3E-13 102.3 5.8 98 335-464 37-136 (232)
264 3sso_A Methyltransferase; macr 98.8 8.9E-09 3E-13 106.6 7.9 100 335-467 216-326 (419)
265 1af7_A Chemotaxis receptor met 98.7 2E-08 6.9E-13 99.7 9.2 109 336-464 106-251 (274)
266 3lst_A CALO1 methyltransferase 98.7 3.5E-08 1.2E-12 101.2 10.5 116 326-469 175-290 (348)
267 3uzu_A Ribosomal RNA small sub 98.7 3.2E-08 1.1E-12 98.5 9.2 90 322-416 29-124 (279)
268 3giw_A Protein of unknown func 98.7 4.5E-08 1.5E-12 96.7 10.2 113 336-468 79-203 (277)
269 3ftd_A Dimethyladenosine trans 98.7 2.9E-08 9.9E-13 97.2 8.3 93 318-417 14-106 (249)
270 2px2_A Genome polyprotein [con 98.7 2.3E-08 7.8E-13 96.6 7.0 103 333-462 71-180 (269)
271 2zfu_A Nucleomethylin, cerebra 98.7 3.8E-08 1.3E-12 93.2 8.4 116 328-491 60-175 (215)
272 4e2x_A TCAB9; kijanose, tetron 98.7 4.2E-09 1.5E-13 110.5 1.5 110 327-466 99-209 (416)
273 3gcz_A Polyprotein; flavivirus 98.6 1.4E-08 4.9E-13 99.6 4.4 126 333-483 88-218 (282)
274 3lcv_B Sisomicin-gentamicin re 98.6 3.8E-08 1.3E-12 95.9 6.8 107 336-468 133-240 (281)
275 3frh_A 16S rRNA methylase; met 98.6 1.1E-07 3.9E-12 91.7 9.7 106 335-469 105-211 (253)
276 3evf_A RNA-directed RNA polyme 98.6 2.3E-07 7.9E-12 90.9 11.7 112 332-464 71-183 (277)
277 4a6d_A Hydroxyindole O-methylt 98.6 3.8E-07 1.3E-11 93.8 13.4 119 326-470 170-288 (353)
278 2wk1_A NOVP; transferase, O-me 98.6 3.2E-07 1.1E-11 91.1 12.2 125 336-485 107-263 (282)
279 3eld_A Methyltransferase; flav 98.5 3.4E-07 1.2E-11 90.4 11.3 127 333-484 79-209 (300)
280 1qyr_A KSGA, high level kasuga 98.5 6.8E-08 2.3E-12 94.7 6.1 89 323-417 9-101 (252)
281 1wg8_A Predicted S-adenosylmet 98.5 9.1E-08 3.1E-12 94.3 7.0 85 326-418 13-101 (285)
282 2qy6_A UPF0209 protein YFCK; s 98.5 1.9E-07 6.4E-12 91.8 8.4 134 334-494 59-234 (257)
283 3reo_A (ISO)eugenol O-methyltr 98.5 6.2E-07 2.1E-11 92.6 11.3 104 333-469 201-304 (368)
284 3o4f_A Spermidine synthase; am 98.5 1.2E-06 4.2E-11 87.3 12.8 137 331-487 80-222 (294)
285 3tka_A Ribosomal RNA small sub 98.4 1.3E-07 4.6E-12 95.2 5.7 89 326-419 48-141 (347)
286 4azs_A Methyltransferase WBDD; 98.4 3.4E-07 1.2E-11 100.2 9.0 73 336-412 67-140 (569)
287 3p9c_A Caffeic acid O-methyltr 98.4 9.7E-07 3.3E-11 91.1 11.1 109 328-469 193-302 (364)
288 4gqb_A Protein arginine N-meth 98.4 4.3E-07 1.5E-11 99.5 7.6 111 336-469 358-471 (637)
289 3ua3_A Protein arginine N-meth 98.3 5.4E-07 1.8E-11 98.8 7.2 111 336-467 410-536 (745)
290 1fp1_D Isoliquiritigenin 2'-O- 98.3 1.2E-06 4E-11 90.6 9.3 102 333-467 207-308 (372)
291 1fp2_A Isoflavone O-methyltran 98.3 2.2E-06 7.4E-11 87.8 9.6 103 334-469 187-292 (352)
292 3c6k_A Spermine synthase; sper 98.2 4.5E-06 1.6E-10 85.7 10.9 134 335-483 205-349 (381)
293 2oo3_A Protein involved in cat 98.2 6.8E-07 2.3E-11 88.2 3.9 75 336-416 92-169 (283)
294 3p8z_A Mtase, non-structural p 98.2 1.2E-05 4.1E-10 76.6 12.2 118 332-476 75-194 (267)
295 4auk_A Ribosomal RNA large sub 98.2 8.1E-06 2.8E-10 83.5 11.3 72 333-416 209-280 (375)
296 1zg3_A Isoflavanone 4'-O-methy 98.1 6.4E-06 2.2E-10 84.5 9.8 102 334-468 192-296 (358)
297 3lkz_A Non-structural protein 98.1 4.6E-05 1.6E-09 74.9 14.3 130 332-486 91-225 (321)
298 2ld4_A Anamorsin; methyltransf 98.1 1.2E-06 4.2E-11 80.1 3.1 90 331-464 8-100 (176)
299 3r24_A NSP16, 2'-O-methyl tran 98.0 5.9E-06 2E-10 81.0 6.6 119 332-482 106-231 (344)
300 3g7u_A Cytosine-specific methy 97.9 0.00011 3.9E-09 75.9 14.9 81 337-425 3-90 (376)
301 2c7p_A Modification methylase 97.8 5.2E-05 1.8E-09 77.0 9.8 80 336-425 11-90 (327)
302 2k4m_A TR8_protein, UPF0146 pr 97.7 3.6E-05 1.2E-09 68.2 6.1 88 334-467 34-123 (153)
303 1g55_A DNA cytosine methyltran 97.7 2.5E-05 8.6E-10 79.8 5.4 81 337-424 3-86 (343)
304 2zig_A TTHA0409, putative modi 97.4 0.00046 1.6E-08 68.8 9.0 48 334-384 234-281 (297)
305 3ubt_Y Modification methylase 97.1 0.0009 3.1E-08 67.5 8.3 78 338-424 2-79 (331)
306 3qv2_A 5-cytosine DNA methyltr 97.0 0.0021 7.1E-08 65.1 9.9 80 337-424 11-96 (327)
307 1g60_A Adenine-specific methyl 97.0 0.00076 2.6E-08 65.9 6.3 49 334-385 211-259 (260)
308 2qrv_A DNA (cytosine-5)-methyl 97.0 0.0016 5.6E-08 64.9 8.7 82 335-423 15-100 (295)
309 4h0n_A DNMT2; SAH binding, tra 96.9 0.0014 4.8E-08 66.5 7.6 80 338-424 5-87 (333)
310 1i4w_A Mitochondrial replicati 96.8 0.002 6.9E-08 65.8 7.2 81 315-400 31-118 (353)
311 3vyw_A MNMC2; tRNA wobble urid 96.7 0.013 4.6E-07 58.3 12.4 131 337-494 98-247 (308)
312 3me5_A Cytosine-specific methy 96.6 0.0019 6.5E-08 68.7 6.3 84 336-424 88-187 (482)
313 3s2e_A Zinc-containing alcohol 96.6 0.0041 1.4E-07 62.8 7.9 102 329-464 160-262 (340)
314 2py6_A Methyltransferase FKBM; 96.5 0.0069 2.4E-07 63.1 9.6 67 331-397 222-292 (409)
315 3tos_A CALS11; methyltransfera 96.5 0.0098 3.4E-07 57.9 9.6 125 335-485 70-238 (257)
316 3pvc_A TRNA 5-methylaminomethy 96.4 0.0012 4.1E-08 73.6 3.2 128 336-490 59-228 (689)
317 1pl8_A Human sorbitol dehydrog 96.4 0.015 5.1E-07 59.1 10.7 103 329-464 165-272 (356)
318 4ej6_A Putative zinc-binding d 96.2 0.0076 2.6E-07 61.8 7.7 103 329-464 176-283 (370)
319 3b5i_A S-adenosyl-L-methionine 96.2 0.017 5.9E-07 59.3 10.2 129 336-468 53-228 (374)
320 2efj_A 3,7-dimethylxanthine me 96.1 0.041 1.4E-06 56.7 12.6 127 336-468 53-228 (384)
321 1f8f_A Benzyl alcohol dehydrog 96.1 0.012 4.2E-07 60.1 8.7 102 330-464 185-288 (371)
322 3two_A Mannitol dehydrogenase; 96.1 0.019 6.6E-07 58.1 9.9 93 330-464 171-264 (348)
323 3fpc_A NADP-dependent alcohol 96.0 0.0072 2.5E-07 61.3 6.2 103 329-464 160-265 (352)
324 2dph_A Formaldehyde dismutase; 96.0 0.0093 3.2E-07 61.7 6.9 116 329-464 179-298 (398)
325 2zig_A TTHA0409, putative modi 95.9 0.0058 2E-07 60.8 4.9 77 388-466 21-98 (297)
326 1e3j_A NADP(H)-dependent ketos 95.9 0.04 1.4E-06 55.8 11.0 102 329-464 162-270 (352)
327 4dkj_A Cytosine-specific methy 95.9 0.049 1.7E-06 56.5 11.7 88 338-425 12-144 (403)
328 1uuf_A YAHK, zinc-type alcohol 95.8 0.032 1.1E-06 57.1 10.2 97 331-464 190-287 (369)
329 1e3i_A Alcohol dehydrogenase, 95.7 0.034 1.2E-06 56.9 9.5 103 330-465 190-297 (376)
330 1p0f_A NADP-dependent alcohol 95.7 0.033 1.1E-06 56.9 9.3 102 330-464 186-292 (373)
331 1kol_A Formaldehyde dehydrogen 95.6 0.02 6.8E-07 59.1 7.7 110 330-464 180-299 (398)
332 3uko_A Alcohol dehydrogenase c 95.6 0.024 8.3E-07 58.0 8.3 103 329-464 187-294 (378)
333 1cdo_A Alcohol dehydrogenase; 95.5 0.052 1.8E-06 55.4 10.3 102 330-464 187-293 (374)
334 1m6e_X S-adenosyl-L-methionnin 95.5 0.01 3.6E-07 60.6 4.8 128 337-467 53-211 (359)
335 3uog_A Alcohol dehydrogenase; 95.5 0.021 7.1E-07 58.3 7.1 99 330-464 184-286 (363)
336 4a2c_A Galactitol-1-phosphate 95.5 0.05 1.7E-06 54.7 9.8 104 328-464 153-259 (346)
337 3jv7_A ADH-A; dehydrogenase, n 95.4 0.023 8E-07 57.3 7.1 99 332-464 168-269 (345)
338 2jhf_A Alcohol dehydrogenase E 95.3 0.06 2.1E-06 54.9 10.0 102 330-464 186-292 (374)
339 1piw_A Hypothetical zinc-type 95.3 0.02 6.9E-07 58.3 6.3 96 331-463 175-274 (360)
340 2fzw_A Alcohol dehydrogenase c 95.3 0.061 2.1E-06 54.8 9.9 102 330-464 185-291 (373)
341 4eez_A Alcohol dehydrogenase 1 95.3 0.058 2E-06 54.3 9.5 102 330-464 158-262 (348)
342 2h6e_A ADH-4, D-arabinose 1-de 95.3 0.02 7E-07 57.8 6.1 97 332-464 168-268 (344)
343 4dvj_A Putative zinc-dependent 95.3 0.033 1.1E-06 56.8 7.7 96 335-464 171-269 (363)
344 3swr_A DNA (cytosine-5)-methyl 95.1 0.058 2E-06 62.1 10.0 79 338-424 542-636 (1002)
345 3gms_A Putative NADPH:quinone 95.1 0.02 6.8E-07 57.8 5.4 101 329-464 138-242 (340)
346 4ft4_B DNA (cytosine-5)-methyl 95.1 0.052 1.8E-06 61.3 9.4 44 337-380 213-260 (784)
347 3m6i_A L-arabinitol 4-dehydrog 95.1 0.075 2.6E-06 53.9 9.7 102 329-464 173-282 (363)
348 3ps9_A TRNA 5-methylaminomethy 95.0 0.08 2.7E-06 58.6 10.6 112 337-467 68-221 (676)
349 1vj0_A Alcohol dehydrogenase, 95.0 0.034 1.2E-06 57.0 7.0 103 329-464 188-297 (380)
350 1boo_A Protein (N-4 cytosine-s 94.9 0.018 6.3E-07 57.9 4.6 63 333-400 250-312 (323)
351 1eg2_A Modification methylase 94.9 0.027 9.2E-07 56.6 5.6 49 333-384 240-291 (319)
352 1boo_A Protein (N-4 cytosine-s 94.8 0.03 1E-06 56.3 5.7 71 388-466 14-85 (323)
353 1rjw_A ADH-HT, alcohol dehydro 94.7 0.049 1.7E-06 54.8 7.2 100 331-464 160-260 (339)
354 3jyn_A Quinone oxidoreductase; 94.7 0.051 1.7E-06 54.3 7.2 99 331-464 136-238 (325)
355 1pqw_A Polyketide synthase; ro 94.6 0.043 1.5E-06 50.4 6.1 100 330-464 33-136 (198)
356 1g60_A Adenine-specific methyl 94.5 0.017 5.8E-07 56.2 3.0 69 390-466 6-75 (260)
357 4b7c_A Probable oxidoreductase 94.4 0.046 1.6E-06 54.8 6.1 102 329-464 143-247 (336)
358 3ip1_A Alcohol dehydrogenase, 94.3 0.09 3.1E-06 54.3 8.1 51 332-387 210-261 (404)
359 3qwb_A Probable quinone oxidor 94.2 0.063 2.1E-06 53.8 6.6 99 331-464 144-246 (334)
360 4eye_A Probable oxidoreductase 94.2 0.07 2.4E-06 53.8 6.8 99 330-464 154-256 (342)
361 3goh_A Alcohol dehydrogenase, 94.2 0.045 1.5E-06 54.5 5.3 92 329-464 136-228 (315)
362 4fs3_A Enoyl-[acyl-carrier-pro 94.0 0.26 8.9E-06 47.4 10.2 126 335-464 5-145 (256)
363 2c0c_A Zinc binding alcohol de 93.9 0.09 3.1E-06 53.5 7.2 100 330-464 158-260 (362)
364 2hcy_A Alcohol dehydrogenase 1 93.9 0.13 4.3E-06 51.9 8.1 101 331-465 165-269 (347)
365 1v3u_A Leukotriene B4 12- hydr 93.8 0.091 3.1E-06 52.6 6.9 101 329-464 139-243 (333)
366 3av4_A DNA (cytosine-5)-methyl 93.8 0.16 5.5E-06 60.0 9.7 80 337-424 852-947 (1330)
367 3fbg_A Putative arginate lyase 93.8 0.073 2.5E-06 53.7 6.1 94 335-463 150-246 (346)
368 1jvb_A NAD(H)-dependent alcoho 93.7 0.11 3.8E-06 52.3 7.4 101 331-464 166-270 (347)
369 4dup_A Quinone oxidoreductase; 93.6 0.091 3.1E-06 53.2 6.6 101 330-465 162-265 (353)
370 3grk_A Enoyl-(acyl-carrier-pro 93.6 0.59 2E-05 45.8 12.3 121 335-465 30-169 (293)
371 1wma_A Carbonyl reductase [NAD 93.4 0.3 1E-05 46.6 9.5 126 335-466 3-139 (276)
372 2eih_A Alcohol dehydrogenase; 93.3 0.13 4.4E-06 51.7 7.1 99 331-464 162-264 (343)
373 2j3h_A NADP-dependent oxidored 93.3 0.085 2.9E-06 53.0 5.7 102 329-464 149-254 (345)
374 2cf5_A Atccad5, CAD, cinnamyl 93.3 0.21 7.3E-06 50.5 8.7 98 331-464 175-274 (357)
375 2d8a_A PH0655, probable L-thre 93.3 0.11 3.6E-06 52.5 6.4 98 330-464 163-266 (348)
376 1wly_A CAAR, 2-haloacrylate re 93.0 0.19 6.4E-06 50.3 7.7 100 330-464 140-243 (333)
377 1iz0_A Quinone oxidoreductase; 92.8 0.15 5E-06 50.3 6.4 91 333-463 123-216 (302)
378 4g81_D Putative hexonate dehyd 92.7 0.94 3.2E-05 43.7 11.8 121 335-465 8-145 (255)
379 4eso_A Putative oxidoreductase 92.6 0.61 2.1E-05 44.6 10.5 122 335-465 7-138 (255)
380 1xa0_A Putative NADPH dependen 92.6 0.17 5.7E-06 50.5 6.6 99 331-464 144-245 (328)
381 1qor_A Quinone oxidoreductase; 92.6 0.19 6.5E-06 50.0 6.9 100 330-464 135-238 (327)
382 1eg2_A Modification methylase 92.4 0.055 1.9E-06 54.4 2.6 67 388-465 38-106 (319)
383 3t4x_A Oxidoreductase, short c 92.3 1.2 4E-05 42.8 12.1 83 335-418 9-97 (267)
384 3k31_A Enoyl-(acyl-carrier-pro 92.3 0.72 2.5E-05 45.2 10.7 125 335-465 29-168 (296)
385 3o38_A Short chain dehydrogena 92.3 1.1 3.7E-05 42.9 11.8 83 335-419 21-114 (266)
386 3rku_A Oxidoreductase YMR226C; 92.1 1.3 4.4E-05 43.2 12.3 80 336-416 33-125 (287)
387 3is3_A 17BETA-hydroxysteroid d 92.1 1.7 5.7E-05 41.8 12.9 126 335-466 17-153 (270)
388 3pxx_A Carveol dehydrogenase; 92.1 2.2 7.6E-05 41.0 13.9 124 335-466 9-154 (287)
389 3ioy_A Short-chain dehydrogena 92.1 1.1 3.8E-05 44.4 11.9 83 335-418 7-99 (319)
390 3tjr_A Short chain dehydrogena 92.0 1 3.4E-05 44.2 11.5 83 335-420 30-122 (301)
391 2j8z_A Quinone oxidoreductase; 92.0 0.2 6.9E-06 50.6 6.4 100 330-464 157-260 (354)
392 4a0s_A Octenoyl-COA reductase/ 92.0 0.25 8.6E-06 51.6 7.3 51 331-387 216-268 (447)
393 1yqd_A Sinapyl alcohol dehydro 91.8 0.48 1.6E-05 48.1 9.0 98 331-464 182-281 (366)
394 3oig_A Enoyl-[acyl-carrier-pro 91.8 1.6 5.6E-05 41.5 12.5 128 335-466 6-148 (266)
395 1yb5_A Quinone oxidoreductase; 91.8 0.17 5.9E-06 51.1 5.6 101 330-465 165-269 (351)
396 3v2g_A 3-oxoacyl-[acyl-carrier 91.8 2.2 7.4E-05 41.1 13.4 122 335-466 30-166 (271)
397 2b5w_A Glucose dehydrogenase; 91.8 0.19 6.5E-06 50.8 5.9 99 331-464 162-272 (357)
398 3lyl_A 3-oxoacyl-(acyl-carrier 91.8 1.9 6.7E-05 40.4 12.8 82 336-420 5-96 (247)
399 3lf2_A Short chain oxidoreduct 91.6 2.1 7.1E-05 40.9 13.0 124 336-464 8-144 (265)
400 3ucx_A Short chain dehydrogena 91.6 1.9 6.5E-05 41.2 12.6 78 335-415 10-97 (264)
401 2hwk_A Helicase NSP2; rossman 91.5 0.17 5.8E-06 49.3 4.8 78 393-484 195-272 (320)
402 3nx4_A Putative oxidoreductase 91.3 0.23 7.8E-06 49.3 5.8 95 332-464 142-240 (324)
403 3rkr_A Short chain oxidoreduct 91.3 2.1 7.1E-05 40.8 12.5 79 335-416 28-116 (262)
404 3r3s_A Oxidoreductase; structu 91.2 2.5 8.4E-05 41.2 13.2 122 335-466 48-186 (294)
405 3krt_A Crotonyl COA reductase; 91.2 0.18 6.1E-06 53.0 5.1 51 331-387 224-276 (456)
406 3ek2_A Enoyl-(acyl-carrier-pro 91.1 0.67 2.3E-05 44.3 8.8 126 334-465 12-153 (271)
407 2jah_A Clavulanic acid dehydro 91.1 2.1 7.3E-05 40.4 12.3 79 336-417 7-95 (247)
408 3svt_A Short-chain type dehydr 91.1 2.3 8E-05 40.9 12.8 81 335-416 10-101 (281)
409 4fn4_A Short chain dehydrogena 91.0 1.7 5.7E-05 41.9 11.5 79 335-416 6-94 (254)
410 3ftp_A 3-oxoacyl-[acyl-carrier 90.9 1.5 5E-05 42.4 11.1 83 335-420 27-119 (270)
411 4fgs_A Probable dehydrogenase 90.8 1.3 4.4E-05 43.2 10.5 122 335-465 28-159 (273)
412 2zb4_A Prostaglandin reductase 90.8 0.3 1E-05 49.3 6.2 103 329-464 152-259 (357)
413 3gaz_A Alcohol dehydrogenase s 90.7 0.29 9.8E-06 49.2 6.0 97 330-464 145-245 (343)
414 1tt7_A YHFP; alcohol dehydroge 90.7 0.21 7.3E-06 49.7 5.0 99 331-464 145-246 (330)
415 3pk0_A Short-chain dehydrogena 90.7 2.3 7.9E-05 40.6 12.2 82 335-418 9-100 (262)
416 1ae1_A Tropinone reductase-I; 90.6 1.9 6.6E-05 41.4 11.7 80 335-417 20-110 (273)
417 3gaf_A 7-alpha-hydroxysteroid 90.6 1.4 4.9E-05 41.9 10.7 83 335-420 11-103 (256)
418 3tfo_A Putative 3-oxoacyl-(acy 90.6 1.7 5.9E-05 41.8 11.3 80 336-418 4-93 (264)
419 3h7a_A Short chain dehydrogena 90.6 0.98 3.3E-05 43.1 9.4 83 335-420 6-97 (252)
420 3pgx_A Carveol dehydrogenase; 90.5 1.7 5.9E-05 41.9 11.2 81 335-418 14-117 (280)
421 1yb1_A 17-beta-hydroxysteroid 90.5 3.3 0.00011 39.7 13.2 80 335-417 30-119 (272)
422 2dq4_A L-threonine 3-dehydroge 90.4 0.2 6.8E-06 50.4 4.4 97 330-464 160-261 (343)
423 3rih_A Short chain dehydrogena 90.4 1 3.6E-05 44.1 9.6 82 335-418 40-131 (293)
424 3r1i_A Short-chain type dehydr 90.3 1.3 4.5E-05 42.8 10.2 83 335-420 31-123 (276)
425 4ibo_A Gluconate dehydrogenase 90.3 2 6.9E-05 41.4 11.4 81 335-418 25-115 (271)
426 3ksu_A 3-oxoacyl-acyl carrier 90.2 2.1 7.3E-05 40.9 11.5 122 335-466 10-148 (262)
427 1zsy_A Mitochondrial 2-enoyl t 90.2 0.91 3.1E-05 45.7 9.2 56 330-387 162-219 (357)
428 3ijr_A Oxidoreductase, short c 90.1 3.8 0.00013 39.8 13.4 122 335-466 46-183 (291)
429 3oec_A Carveol dehydrogenase ( 90.1 2.6 8.9E-05 41.6 12.4 84 335-421 45-150 (317)
430 4a27_A Synaptic vesicle membra 90.1 0.25 8.6E-06 49.8 4.9 98 330-464 137-237 (349)
431 4egf_A L-xylulose reductase; s 90.1 1.8 6.3E-05 41.4 10.9 81 336-419 20-111 (266)
432 3u5t_A 3-oxoacyl-[acyl-carrier 90.1 1.7 5.8E-05 41.8 10.7 126 335-466 26-162 (267)
433 3tqh_A Quinone oxidoreductase; 90.0 0.55 1.9E-05 46.6 7.3 95 329-463 146-243 (321)
434 1gu7_A Enoyl-[acyl-carrier-pro 90.0 0.52 1.8E-05 47.5 7.2 103 331-464 162-274 (364)
435 3imf_A Short chain dehydrogena 89.8 2.6 8.8E-05 40.1 11.7 78 336-416 6-93 (257)
436 2ae2_A Protein (tropinone redu 89.7 3 0.0001 39.6 12.0 80 335-417 8-98 (260)
437 1xg5_A ARPG836; short chain de 89.7 4.3 0.00015 38.8 13.3 80 336-416 32-121 (279)
438 1geg_A Acetoin reductase; SDR 89.6 3.1 0.00011 39.4 12.1 78 336-416 2-89 (256)
439 1g0o_A Trihydroxynaphthalene r 89.6 3.5 0.00012 39.7 12.7 120 336-465 29-163 (283)
440 3sc4_A Short chain dehydrogena 89.6 3.5 0.00012 39.9 12.7 126 335-466 8-152 (285)
441 3sju_A Keto reductase; short-c 89.6 2.1 7.2E-05 41.4 11.0 83 336-421 24-116 (279)
442 2cdc_A Glucose dehydrogenase g 89.5 0.61 2.1E-05 47.2 7.3 99 330-465 166-278 (366)
443 3v8b_A Putative dehydrogenase, 89.4 2.3 7.9E-05 41.2 11.2 80 335-417 27-116 (283)
444 3oid_A Enoyl-[acyl-carrier-pro 89.3 2.8 9.6E-05 39.9 11.5 80 335-417 3-93 (258)
445 3tsc_A Putative oxidoreductase 89.3 2.7 9.3E-05 40.3 11.5 81 335-418 10-113 (277)
446 1vl8_A Gluconate 5-dehydrogena 89.2 4.2 0.00014 38.9 12.7 80 335-417 20-110 (267)
447 3e9n_A Putative short-chain de 89.1 3 0.0001 39.1 11.5 74 336-417 5-86 (245)
448 2p91_A Enoyl-[acyl-carrier-pro 89.1 3 0.0001 40.2 11.7 121 335-465 20-160 (285)
449 3gqv_A Enoyl reductase; medium 89.0 1.1 3.9E-05 45.3 8.9 95 334-463 163-261 (371)
450 2pd4_A Enoyl-[acyl-carrier-pro 88.9 1.7 5.9E-05 41.8 9.8 121 335-465 5-144 (275)
451 3t7c_A Carveol dehydrogenase; 88.9 4.1 0.00014 39.6 12.7 80 335-417 27-128 (299)
452 4e6p_A Probable sorbitol dehyd 88.9 3.2 0.00011 39.4 11.6 80 335-420 7-96 (259)
453 1ja9_A 4HNR, 1,3,6,8-tetrahydr 88.9 1.5 5.2E-05 41.7 9.3 120 336-465 21-155 (274)
454 2rhc_B Actinorhodin polyketide 88.9 4.5 0.00015 38.9 12.7 80 335-417 21-110 (277)
455 3uve_A Carveol dehydrogenase ( 88.9 2.7 9.3E-05 40.5 11.2 80 335-417 10-115 (286)
456 3edm_A Short chain dehydrogena 88.9 2.2 7.7E-05 40.6 10.5 126 335-466 7-144 (259)
457 3qiv_A Short-chain dehydrogena 88.8 2.9 0.0001 39.3 11.2 79 335-416 8-96 (253)
458 2vn8_A Reticulon-4-interacting 88.8 1.2 4E-05 45.2 8.8 96 333-463 181-278 (375)
459 3l77_A Short-chain alcohol deh 88.7 5.2 0.00018 37.1 12.8 80 336-418 2-92 (235)
460 3cxt_A Dehydrogenase with diff 88.7 4.1 0.00014 39.6 12.4 80 335-417 33-122 (291)
461 4imr_A 3-oxoacyl-(acyl-carrier 88.7 2.2 7.6E-05 41.1 10.4 80 335-417 32-120 (275)
462 3gvc_A Oxidoreductase, probabl 88.6 3.6 0.00012 39.7 11.9 78 335-418 28-115 (277)
463 3awd_A GOX2181, putative polyo 88.5 3.7 0.00013 38.6 11.7 78 336-416 13-100 (260)
464 3f1l_A Uncharacterized oxidore 88.3 5.3 0.00018 37.7 12.6 80 335-416 11-102 (252)
465 3s55_A Putative short-chain de 88.2 4.6 0.00016 38.8 12.3 84 335-421 9-114 (281)
466 1zem_A Xylitol dehydrogenase; 88.1 3.3 0.00011 39.4 11.1 79 335-416 6-94 (262)
467 3osu_A 3-oxoacyl-[acyl-carrier 88.1 4.3 0.00015 38.2 11.8 83 336-421 4-97 (246)
468 2h7i_A Enoyl-[acyl-carrier-pro 88.0 0.81 2.8E-05 44.0 6.7 124 335-465 6-148 (269)
469 1xq1_A Putative tropinone redu 88.0 4.7 0.00016 38.2 12.1 78 336-416 14-102 (266)
470 1xhl_A Short-chain dehydrogena 87.9 4 0.00014 39.8 11.8 81 335-416 25-116 (297)
471 4dmm_A 3-oxoacyl-[acyl-carrier 87.9 4.7 0.00016 38.6 12.2 83 335-420 27-120 (269)
472 1w6u_A 2,4-dienoyl-COA reducta 87.9 6.5 0.00022 37.9 13.3 79 336-417 26-115 (302)
473 1fmc_A 7 alpha-hydroxysteroid 87.8 4.4 0.00015 37.9 11.7 79 336-417 11-99 (255)
474 3pi7_A NADH oxidoreductase; gr 87.8 0.28 9.4E-06 49.4 3.3 95 334-464 162-262 (349)
475 3ai3_A NADPH-sorbose reductase 87.8 4.9 0.00017 38.1 12.1 79 336-417 7-96 (263)
476 2c07_A 3-oxoacyl-(acyl-carrier 87.7 5.1 0.00018 38.5 12.3 80 336-418 44-133 (285)
477 1gee_A Glucose 1-dehydrogenase 87.7 3.6 0.00012 38.8 11.1 79 336-417 7-96 (261)
478 4dqx_A Probable oxidoreductase 87.6 4.8 0.00017 38.7 12.1 121 336-465 27-159 (277)
479 1iy8_A Levodione reductase; ox 87.6 5.7 0.0002 37.7 12.5 80 336-416 13-102 (267)
480 2a4k_A 3-oxoacyl-[acyl carrier 87.5 3.3 0.00011 39.6 10.8 118 336-466 6-137 (263)
481 3nyw_A Putative oxidoreductase 87.4 3.1 0.00011 39.4 10.4 85 336-421 7-102 (250)
482 4dry_A 3-oxoacyl-[acyl-carrier 87.4 2.5 8.6E-05 40.9 9.9 80 335-416 32-121 (281)
483 4da9_A Short-chain dehydrogena 87.3 2.8 9.7E-05 40.5 10.2 79 335-416 28-117 (280)
484 3tox_A Short chain dehydrogena 87.0 2.5 8.5E-05 41.0 9.6 79 335-416 7-95 (280)
485 2bd0_A Sepiapterin reductase; 86.9 3.4 0.00012 38.5 10.3 78 336-416 2-96 (244)
486 1xkq_A Short-chain reductase f 86.6 4.1 0.00014 39.2 10.9 82 335-417 5-97 (280)
487 2uvd_A 3-oxoacyl-(acyl-carrier 86.6 5.5 0.00019 37.3 11.6 79 336-417 4-93 (246)
488 2wyu_A Enoyl-[acyl carrier pro 86.6 1.8 6E-05 41.3 8.1 120 336-465 8-146 (261)
489 3rwb_A TPLDH, pyridoxal 4-dehy 86.5 4.4 0.00015 38.2 10.9 78 335-418 5-92 (247)
490 4fc7_A Peroxisomal 2,4-dienoyl 86.3 5.9 0.0002 38.0 11.8 79 335-416 26-115 (277)
491 1yxm_A Pecra, peroxisomal tran 86.3 6.2 0.00021 38.1 12.1 80 336-416 18-110 (303)
492 3v2h_A D-beta-hydroxybutyrate 86.2 4.8 0.00017 38.8 11.2 83 336-420 25-118 (281)
493 4dcm_A Ribosomal RNA large sub 86.1 5.5 0.00019 40.5 12.0 97 335-464 38-135 (375)
494 3f9i_A 3-oxoacyl-[acyl-carrier 86.1 5.2 0.00018 37.5 11.1 79 334-418 12-96 (249)
495 1h2b_A Alcohol dehydrogenase; 85.9 1.2 4.2E-05 44.8 6.9 52 331-387 182-234 (359)
496 4iin_A 3-ketoacyl-acyl carrier 85.9 3.9 0.00013 39.1 10.3 81 335-418 28-119 (271)
497 2b4q_A Rhamnolipids biosynthes 85.8 3.9 0.00013 39.4 10.2 80 335-418 28-117 (276)
498 2zat_A Dehydrogenase/reductase 85.7 7.6 0.00026 36.6 12.2 79 335-416 13-101 (260)
499 1sny_A Sniffer CG10964-PA; alp 85.7 4.5 0.00015 38.3 10.5 77 336-416 21-112 (267)
500 3o26_A Salutaridine reductase; 85.6 3.9 0.00013 39.4 10.3 81 335-417 11-102 (311)
No 1
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.8e-77 Score=641.31 Aligned_cols=432 Identities=29% Similarity=0.432 Sum_probs=384.6
Q ss_pred ChHHHHHHHHHHHHHhCCCchHHHhhcCCCCCCCccchhhhhcccCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009708 58 SPHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKDLDD-RDLRLVTDIVGGTIRWRRYLDHLICLL 136 (528)
Q Consensus 58 ~~aR~~A~~~Ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~lv~gv~~~~~~LD~~i~~~ 136 (528)
+++|+.|+|+||+++.++.+++.++... ++...+++ .|++|+++||+||+|++..||++|.++
T Consensus 11 ~~~R~~A~~~L~~v~~~~~~~~~~l~~~----------------~~~~~l~~~~dr~~~~~lv~gvlr~~~~ld~~i~~~ 74 (450)
T 2yxl_A 11 PPKGIRAIIEAIRLGEIIKPSQYAKREA----------------FKKHDVEEAWLNRVLTMIFYDIMKKQGLIDKVIKEI 74 (450)
T ss_dssp CHHHHHHHHHHHHHTTTSSSTHHHHHHH----------------HHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCcHHHHHHHH----------------HHhccCCcHHHHHHHHHHHHHHHHhHHHHHHHHHHh
Confidence 4799999999999988888787755431 11224677 999999999999999999999999999
Q ss_pred ccCCCCCCcccHHHHHHHHHHHHHHHhcCCCCchhHH----HHHHHHHHhcCCCchhhHHHHHHHHHhhcCCCCCCCCcC
Q 009708 137 CHDEKTFSSMEPLLLQILRIGFYEIVKLDMPPYAVVD----ENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPKL 212 (528)
Q Consensus 137 l~~~~~~~~l~~~~~~iLrlg~~el~~~~~p~~~~in----EaV~lak~~~~~~~~~fVN~VL~~~~r~~~~~~~~~~~~ 212 (528)
++ ++++++++++++|||+|+|||+| ++|++++|| |+|++||+++++..++||||||+++++.+.. +.
T Consensus 75 ~~--~~~~~~~~~~~~iLrla~yell~-~ip~~~ain~~~~eaVelak~~~~~~~~~fvNgvL~~~~r~~~~-----~~- 145 (450)
T 2yxl_A 75 VG--VTPLILDPWLRAALRVAVDIALF-HDPSSQTIKNLRWKASDFISSRTHPYVGMYFWDLLDKIFEYKPN-----PK- 145 (450)
T ss_dssp HS--SCGGGSCHHHHHHHHHHHHHHHH-SCBCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTCCCC-----CC-
T ss_pred cc--CChhhcCHHHHHHHHHHHHHHhc-CCCchHHhccccHHHHHHHHhccccccccchHHHHHHHhhcccc-----cc-
Confidence 97 57899999999999999999999 999999999 9999999998888999999999999986311 10
Q ss_pred cCCcHHHHHHHHhhhcChHHHHHHHHHHhCHHHHHHHHHhcC-CCCCeEEEEcCCCCCCHHHHHHHHhhcCCCCCceecc
Q 009708 213 EGNDRAQARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNN-SDPSFSLRANSRKGVTRADLVMQLNLLKLQVPHELSL 291 (528)
Q Consensus 213 ~~~~~~~~~~ls~~~s~P~w~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~rvn~~k~~~~~~~~~~L~~~~~~~~~~~~~ 291 (528)
+....++++||+|+|++++|.+.|| +++++++++++ ++||+++|||++| .+++++.+.|++.|+ .....+
T Consensus 146 -----~~~~~~~~~~~~P~w~~~~~~~~~g-~~~~~~~~a~~~~~~~~~~Rvn~~k-~~~~~~~~~L~~~g~--~~~~~~ 216 (450)
T 2yxl_A 146 -----NELEELEWKYLAPSWLIERVKGILG-DETEDFFRSVNKRHEWISIRVNTLK-ANVEEVIGELEEDGV--EVVRSE 216 (450)
T ss_dssp -----SHHHHHHHHHTSCHHHHHHHHHHHG-GGHHHHHHHHHCCCCEEEEEECTTT-CCHHHHHHHHHHTTC--CEEECS
T ss_pred -----chhhhhhhHhcCcHHHHHHHHHHhh-HHHHHHHHhcCCCCCCEEEEEcCCC-CCHHHHHHHHHhCCc--cceecC
Confidence 1246789999999999999999999 78999999999 9999999999999 799999999998665 445678
Q ss_pred cCCceEEeeCCccchhcccccccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChH
Q 009708 292 HLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKG 371 (528)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~ 371 (528)
++++.+.+.... .+...+.|.+|.+++||.+|++++.++++++|++|||+|||+|++|+++++.+++.++|+|+|+++.
T Consensus 217 ~~~~~~~~~~~~-~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~ 295 (450)
T 2yxl_A 217 RVPTILKIKGPY-NFDTSSAFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKM 295 (450)
T ss_dssp SCTTEEEEESCC-CTTSCHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHH
T ss_pred ccCceEEeCCCC-CcccCchhhCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHH
Confidence 889998885432 4667889999999999999999999999999999999999999999999999876689999999999
Q ss_pred HHHHHHHHHHHcCCCccEEEEcCccccccccCC-CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHH
Q 009708 372 RLRILNETAKLHQVNSVIRTIHADLRTFADNST-VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDA 450 (528)
Q Consensus 372 ~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~-~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~ 450 (528)
+++.+++|++++|+++ ++++++|+..+..... ++||+|++||||||+|+++++|+++|.+++.++..+..+|.++|.+
T Consensus 296 ~l~~~~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~ 374 (450)
T 2yxl_A 296 RMKRLKDFVKRMGIKI-VKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLES 374 (450)
T ss_dssp HHHHHHHHHHHTTCCS-EEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCc-EEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999986 8999999988754332 6799999999999999999999999999999999999999999999
Q ss_pred HhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCCceEecCCCCCCCccccCCceEEEcCCCCCCCceEEEEEEec
Q 009708 451 ASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPEFSIDPADGLVPSDFVTKHGFFFSDPIKHSLDGAFAARLVRA 527 (528)
Q Consensus 451 a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~dGff~a~l~k~ 527 (528)
+.++|||||+|||+|||++++||+++|.+|+++|++|+++++...+ ......|+++++||.+++||||+|+|+|+
T Consensus 375 a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~~~~~dGff~a~l~k~ 449 (450)
T 2yxl_A 375 AARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFKLVPLKSPY--DPGFLEGTMRAWPHRHSTIGFFYALLEKS 449 (450)
T ss_dssp HHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCEECCCCSSS--EECSSTTCEEECHHHHSSCCEEEEEEECC
T ss_pred HHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCEEeeccccc--ccccCCCeEEECCCCCCCCceEEEEEEEC
Confidence 9999999999999999999999999999999999999998875432 11245688999999999999999999985
No 2
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=1.5e-75 Score=623.06 Aligned_cols=423 Identities=29% Similarity=0.415 Sum_probs=372.4
Q ss_pred hHHHHHHHHHHHHHhCCCchHHHhhcCCCCCCCccchhhhhcccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 009708 59 PHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDHLICLLCH 138 (528)
Q Consensus 59 ~aR~~A~~~Ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lv~gv~~~~~~LD~~i~~~l~ 138 (528)
.+|+.|+|+||+++..+.+.+.++... ...+++.|++|+++||+||+||+..||++|.++++
T Consensus 6 ~aR~~A~~~L~~~~~~~~~~~~~l~~~------------------~~~~~~~dr~~~~~lv~gvlr~~~~ld~~i~~~~~ 67 (429)
T 1sqg_A 6 NLRSMAAQAVEQVVEQGQSLSNILPPL------------------QQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMA 67 (429)
T ss_dssp CHHHHHHHHHHHHHHHCCCHHHHHHHH------------------HTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHH------------------HhhCCHHHHHHHHHHHHHHHHhHHHHHHHHHHhcC
Confidence 489999999999988877777665431 12478899999999999999999999999999997
Q ss_pred CCCCCCcccHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHhcCCCchhhHHHHHHHHHhhcCCCCCCCCcCcCCcHH
Q 009708 139 DEKTFSSMEPLLLQILRIGFYEIVKLDMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKDNNSLPLPKLEGNDRA 218 (528)
Q Consensus 139 ~~~~~~~l~~~~~~iLrlg~~el~~~~~p~~~~inEaV~lak~~~~~~~~~fVN~VL~~~~r~~~~~~~~~~~~~~~~~~ 218 (528)
++++++++++++|||+|+|||+|+++|++++|||+|++||+|++..+++||||||+++++..+.. +. .
T Consensus 68 --~~~~~~~~~~~~iLrl~~yel~~~~~p~~~~ineaVelak~~~~~~~~~fvN~vL~~~~r~~~~~----~~------~ 135 (429)
T 1sqg_A 68 --RPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEEL----LA------E 135 (429)
T ss_dssp --SCCCGGGHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHH----HH------H
T ss_pred --CChhhcCHHHHHHHHHHHHHHhhCCCCchHhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhcc----cc------c
Confidence 57899999999999999999999999999999999999999998889999999999999864321 00 0
Q ss_pred HHHHHHhhhcChHHHHHHHHHHhCHHHHHHHHHhcCCCCCeEEEEcCCCCCCHHHHHHHHhhcCCCCCceecccCCceEE
Q 009708 219 QARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKLQVPHELSLHLDEFIR 298 (528)
Q Consensus 219 ~~~~ls~~~s~P~w~~~~~~~~~g~~~~~~~~~~~~~~~~~~~rvn~~k~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 298 (528)
....++ +||+|.|++++|.+.|| +++++++++++++||+++|||++| .+++++.+.|.+.|+ .....++.++.++
T Consensus 136 ~~~~~~-~~~~p~w~~~~~~~~~g-~~~~~~~~~~~~~~~~~~Rvn~~~-~~~~~~~~~l~~~g~--~~~~~~~~~~~~~ 210 (429)
T 1sqg_A 136 FNASDA-RYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTH-HSRDSWLALLDEAGM--KGFPHADYPDAVR 210 (429)
T ss_dssp HTTSGG-GGCSCHHHHHHHHHHCT-TTHHHHHHHHTSCCCEEEEECTTT-CCHHHHHHHHHHTTC--CEECCTTCTTEEE
T ss_pred chhhhh-hhcCcHHHHHHHHHHhh-HHHHHHHHhCCCCCCeEEEEcCCC-CCHHHHHHHHHhCCC--ceeecCCCCCEEE
Confidence 011345 89999999999999999 678999999999999999999999 699999999998665 3456778888888
Q ss_pred eeCCccchhcccccccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHH
Q 009708 299 VKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNE 378 (528)
Q Consensus 299 ~~~~~~~~~~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~ 378 (528)
+..+. .+...+.|.+|.+++||.++++++.++++++|++|||+|||||++|+++++.+++ ++|+|+|+++.+++.+++
T Consensus 211 ~~~~~-~~~~~~~~~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~ 288 (429)
T 1sqg_A 211 LETPA-PVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYD 288 (429)
T ss_dssp ESSCC-CGGGSTTGGGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHH
T ss_pred ECCCC-CcccChHHhCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHH
Confidence 86543 4667889999999999999999999999999999999999999999999998754 899999999999999999
Q ss_pred HHHHcCCCccEEEEcCcccccccc-CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcC
Q 009708 379 TAKLHQVNSVIRTIHADLRTFADN-STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKP 457 (528)
Q Consensus 379 n~~~~g~~~~i~~~~~D~~~~~~~-~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkp 457 (528)
|++++|+. ++++++|+..+... ..++||+|++||||||+|+++++|+++|.++..++..+..+|.++|+++.++|||
T Consensus 289 ~~~~~g~~--~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lkp 366 (429)
T 1sqg_A 289 NLKRLGMK--ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 (429)
T ss_dssp HHHHTTCC--CEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEE
T ss_pred HHHHcCCC--eEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999985 68899999886532 2367999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEcCCCCchhhHHHHHHHHhhCCCceEecCCCCCCCccccCCceEEEcCCCCCCCceEEEEEEec
Q 009708 458 GGVLVYSTCSIDPEENEERVEAFLLRHPEFSIDPADGLVPSDFVTKHGFFFSDPIKHSLDGAFAARLVRA 527 (528)
Q Consensus 458 GG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~dGff~a~l~k~ 527 (528)
||+|||+|||++++||+++|.+|+.+|++|++++ . ......| ++++||.+++||||+|+|+|.
T Consensus 367 GG~lvystcs~~~~ene~~v~~~l~~~~~~~~~~-~-----~~~~~~~-~~~~P~~~~~dGff~a~l~k~ 429 (429)
T 1sqg_A 367 GGTLVYATCSVLPEENSLQIKAFLQRTADAELCE-T-----GTPEQPG-KQNLPGAEEGDGFFYAKLIKK 429 (429)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHCTTCEECS-S-----BCSSSBS-EEECCCTTSCCSEEEEEEEC-
T ss_pred CCEEEEEECCCChhhHHHHHHHHHHhCCCCEEeC-C-----CCCCCCe-EEECCCCCCCCceEEEEEEEC
Confidence 9999999999999999999999999999999876 1 1122234 689999999999999999984
No 3
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=2.9e-55 Score=448.42 Aligned_cols=303 Identities=28% Similarity=0.412 Sum_probs=260.9
Q ss_pred HHHHHHHhhhcChHHHHHHHHHHhCHHHHHHHHHhcCCCCCeEEEEcCCCCCCHHHHHHHHhhcCCCCCceecccCCceE
Q 009708 218 AQARALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKLQVPHELSLHLDEFI 297 (528)
Q Consensus 218 ~~~~~ls~~~s~P~w~~~~~~~~~g~~~~~~~~~~~~~~~~~~~rvn~~k~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~ 297 (528)
+..++||++||||+||+++|.+.|| +++++++++++++||+++|||++| .+++++.+.|++.|+ ..+..+++++.+
T Consensus 5 ~~~~~l~~~~~~P~w~~~~~~~~~g-~~~~~~~~~~~~~~p~~~RvN~~k-~~~~~~~~~L~~~g~--~~~~~~~~~~~~ 80 (315)
T 1ixk_A 5 PSMLDKLLRLGYSKLFADRYFQLWG-ERAIRIAEAMEKPLPRCFRVNTLK-ISVQDLVKRLNKKGF--QFKRVPWAKEGF 80 (315)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHT-THHHHHHHHTTSCCCCEEEECTTT-SCHHHHHHHHHHTTC--EEEEETTEEEEE
T ss_pred cHHHHHHHHhCCcHHHHHHHHHHcc-HHHHHHHHHcCCCCCeEEEEeCCC-CCHHHHHHHHHhCCC--eeeECCCCCceE
Confidence 3577899999999999999999999 789999999999999999999999 799999999999665 345667788787
Q ss_pred EeeCCccchhcccccccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHH
Q 009708 298 RVKTGLQNVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILN 377 (528)
Q Consensus 298 ~~~~~~~~~~~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~ 377 (528)
.+..+...+...+.|.+|++++||.+|++++.++++++|++|||+|||+|++|+++++.+++.++|+|+|+++.+++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~ 160 (315)
T 1ixk_A 81 CLTREPFSITSTPEFLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETR 160 (315)
T ss_dssp EEEECSSCGGGSHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHH
T ss_pred EEeCCCCCcccChhHhcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH
Confidence 77543224667889999999999999999999999999999999999999999999998877789999999999999999
Q ss_pred HHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcC
Q 009708 378 ETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKP 457 (528)
Q Consensus 378 ~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkp 457 (528)
+|++++|+.+ ++++++|+..+.. ..++||+|++||||||+|+++++|+++|.++..++..+...|.++|+++.++|||
T Consensus 161 ~~~~~~g~~~-v~~~~~D~~~~~~-~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lkp 238 (315)
T 1ixk_A 161 LNLSRLGVLN-VILFHSSSLHIGE-LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP 238 (315)
T ss_dssp HHHHHHTCCS-EEEESSCGGGGGG-GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred HHHHHhCCCe-EEEEECChhhccc-ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999986 8999999988764 2467999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEcCCCCchhhHHHHHHHHhhCCCceEecCCCCCC--Ccc----c--cCCceEEEcCCCCCCCceEEEEEEec
Q 009708 458 GGVLVYSTCSIDPEENEERVEAFLLRHPEFSIDPADGLVP--SDF----V--TKHGFFFSDPIKHSLDGAFAARLVRA 527 (528)
Q Consensus 458 GG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~~~~~~~~--~~~----~--~~~g~~~~~P~~~~~dGff~a~l~k~ 527 (528)
||+|||+|||++++||+++|.+|++++ +|+++++....+ ..+ . ...+++|++||.+++||||+|+|+|.
T Consensus 239 GG~lv~stcs~~~~Ene~~v~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGfF~A~l~k~ 315 (315)
T 1ixk_A 239 GGILVYSTCSLEPEENEFVIQWALDNF-DVELLPLKYGEPALTNPFGIELSEEIKNARRLYPDVHETSGFFIAKIRKL 315 (315)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHS-SEEEECCCSSEECCSSGGGCCCCGGGGGSEEECTTTSSSCSEEEEEEEEC
T ss_pred CCEEEEEeCCCChHHhHHHHHHHHhcC-CCEEecCCccccCcccccccccccccCCEEEECCCCCCcccEEEEEEEEC
Confidence 999999999999999999999999986 588877652110 011 0 11467999999999999999999984
No 4
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=7.9e-54 Score=455.94 Aligned_cols=290 Identities=30% Similarity=0.397 Sum_probs=259.0
Q ss_pred cChHHHHHHHHHHhCHHHHHHHHHhcCCC-CCeEEEEcCCCCCCHHHHHHHHhhcCCCCCceecccCCceEEeeCCccch
Q 009708 228 SHPVWMVRRWTKYLGQEEAIKLMVWNNSD-PSFSLRANSRKGVTRADLVMQLNLLKLQVPHELSLHLDEFIRVKTGLQNV 306 (528)
Q Consensus 228 s~P~w~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~rvn~~k~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (528)
.+|+||+++|.+.||+ ++++++++++++ |+++||||++| ++++++.+.| |+ ..+..+++++.+++..+. .+
T Consensus 1 ~lP~w~~~~~~~~~g~-e~~~~l~a~~~~~~~~~lRvN~lk-~~~~~~~~~l---~~--~~~~~~~~~~g~~l~~~~-~~ 72 (464)
T 3m6w_A 1 MLPKAFLSRMAELLGE-EFPAFLKALTEGKRTYGLRVNTLK-LPPEAFQRIS---PW--PLRPIPWCQEGFYYPEEA-RP 72 (464)
T ss_dssp CCCHHHHHHHHHHHGG-GHHHHHHHHHTSCCCCEEEECTTT-CCHHHHHHHC---SS--CCEEETTEEEEEECCTTC-CC
T ss_pred CCcHHHHHHHHHHHHH-HHHHHHHHcCCCCCCeEEEEcCCC-CCHHHHHHHc---CC--CceecCCCCceEEECCCC-Cc
Confidence 3899999999999995 599999999999 99999999999 7999998776 23 345678888888876432 34
Q ss_pred hcccccccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCC
Q 009708 307 IQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN 386 (528)
Q Consensus 307 ~~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~ 386 (528)
...+.|.+|.+++||++|++++.++++++|++|||+|||||++|+++|+++++.++|+|+|+|+.+++.+++|++++|+.
T Consensus 73 ~~~~~~~~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~ 152 (464)
T 3m6w_A 73 GPHPFFYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP 152 (464)
T ss_dssp SSSHHHHTTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC
T ss_pred ccChHHhCCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe
Confidence 56788999999999999999999999999999999999999999999999887899999999999999999999999997
Q ss_pred ccEEEEcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 387 SVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 387 ~~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
+.++++|+..+.....++||+|++||||||+|+++++|+++|.++++++..+..+|.++|+.++++|||||+||||||
T Consensus 153 --v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 153 --LAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp --CEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred --EEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 789999998876433578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhHHHHHHHHhhCCCceEecCCCCCC-----Cccc----cCCceEEEcCCCCCCCceEEEEEEec
Q 009708 467 SIDPEENEERVEAFLLRHPEFSIDPADGLVP-----SDFV----TKHGFFFSDPIKHSLDGAFAARLVRA 527 (528)
Q Consensus 467 s~~~~Ene~~v~~~l~~~~~~~~~~~~~~~~-----~~~~----~~~g~~~~~P~~~~~dGff~a~l~k~ 527 (528)
|++++||+++|.+|+++||+|+++++..... ..+. ...++++++||.+++||||+|+|+|.
T Consensus 231 s~~~eEne~vv~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGfF~A~l~k~ 300 (464)
T 3m6w_A 231 TFAPEENEGVVAHFLKAHPEFRLEDARLHPLFAPGVPEWGEGNPELLKTARLWPHRLEGEGHFLARFRKE 300 (464)
T ss_dssp CCCGGGTHHHHHHHHHHCTTEEEECCCCSTTSEECCGGGTTTCGGGGGSEEECTTTSSSSCEEEEEEEEC
T ss_pred cCchhcCHHHHHHHHHHCCCcEEEecccccccccCcccccccccccCCeEEECCCCCCceeEEEEEEEEC
Confidence 9999999999999999999999998753211 0111 12468999999999999999999985
No 5
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=1.2e-53 Score=458.42 Aligned_cols=298 Identities=26% Similarity=0.350 Sum_probs=258.7
Q ss_pred hhcChHHHHHHHHHHhCHH-HHHHHHHhcCCCCCeEEEEcCCCCCCHHHHHHHHhhcCCCCCceecccCCceEEeeCCcc
Q 009708 226 IYSHPVWMVRRWTKYLGQE-EAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKLQVPHELSLHLDEFIRVKTGLQ 304 (528)
Q Consensus 226 ~~s~P~w~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~rvn~~k~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (528)
.|++|+||+++|.+.||++ ++++++++++++||+++|||++| .+++++.+.|++.|+. .+..+++++.+.+.....
T Consensus 5 ~~~~P~~~~~~~~~~~g~~~~~~~~~~a~~~~~p~~lRvN~lk-~~~~~~~~~L~~~g~~--~~~~~~~~~~~~~~~~~~ 81 (479)
T 2frx_A 5 TVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLK-ISVADFLQLTAPYGWT--LTPIPWCEEGFWIERDNE 81 (479)
T ss_dssp --CCCHHHHHHHGGGCC----CHHHHHHHTSCCCCCEEECTTT-CCHHHHHHHHGGGCCC--CCEETTEEEEEC------
T ss_pred cccCcHHHHHHHHHHcCccHHHHHHHHhcCCCCCEEEEEeCCC-CCHHHHHHHHHHcCCc--eeecCCCCceEEEecCcc
Confidence 4789999999999999977 57999999999999999999999 7999999999987654 456677777776643211
Q ss_pred ---chhcccccccceeEeecchHHHHHHhcCCC--CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHH
Q 009708 305 ---NVIQAGLLKEGLCAVQDESAGLVVAVVDPQ--PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNET 379 (528)
Q Consensus 305 ---~~~~~~~~~~G~~~~Qd~~s~l~~~~l~~~--~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n 379 (528)
.+..++.|.+|.+++||++|++++.++.+. +|++|||+|||||++|+++|+.+++.++|+|+|+++.+++.+++|
T Consensus 82 ~~~~~~~~~~~~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n 161 (479)
T 2frx_A 82 DALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHAN 161 (479)
T ss_dssp ---CGGGSHHHHTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHH
T ss_pred cccCcccChHHhCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 356678899999999999999999999988 999999999999999999999988789999999999999999999
Q ss_pred HHHcCCCccEEEEcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCC
Q 009708 380 AKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGG 459 (528)
Q Consensus 380 ~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG 459 (528)
++++|+.+ ++++++|+..+.....+.||+|++||||||+|+++++|++.|.++++++..+..+|.++|.+++++|||||
T Consensus 162 ~~r~g~~n-v~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG 240 (479)
T 2frx_A 162 ISRCGISN-VALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGG 240 (479)
T ss_dssp HHHHTCCS-EEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred HHHcCCCc-EEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999986 89999999887643346899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCchhhHHHHHHHHhhCCCc-eEecCCCCCCC--ccccCCceEEEcCCCCCCCceEEEEEEec
Q 009708 460 VLVYSTCSIDPEENEERVEAFLLRHPEF-SIDPADGLVPS--DFVTKHGFFFSDPIKHSLDGAFAARLVRA 527 (528)
Q Consensus 460 ~LvysTcs~~~~Ene~~v~~~l~~~~~~-~~~~~~~~~~~--~~~~~~g~~~~~P~~~~~dGff~a~l~k~ 527 (528)
+|||+|||++++||+++|.+|+++++++ ++.++...++. ...+..|+++++||.+++||||+|+|+|.
T Consensus 241 ~LvysTcs~~~~Ene~vv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~r~~P~~~~~dGfF~A~l~k~ 311 (479)
T 2frx_A 241 TLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDCEGFFVARLRKT 311 (479)
T ss_dssp EEEEEESCCSSTTTHHHHHHHHHHSTTTEEECCCTTSSTTGGGGBCTTSCEEECTTTTTSCCEEEEEEEEC
T ss_pred EEEEecccCCcccCHHHHHHHHHHCCCceecccccccccccccccccCCeEEECCCCCCcCccEEEEEEEc
Confidence 9999999999999999999999999987 55555432221 12345789999999999999999999985
No 6
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=1.6e-53 Score=453.19 Aligned_cols=288 Identities=26% Similarity=0.315 Sum_probs=251.8
Q ss_pred hcChHHHHHHHHHHhCHHHHHHHHHhcCCCCC-eEEEEcCCCCCCHHHHHHHHhhcCCCCC-ceecccCCceEEeeCCcc
Q 009708 227 YSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPS-FSLRANSRKGVTRADLVMQLNLLKLQVP-HELSLHLDEFIRVKTGLQ 304 (528)
Q Consensus 227 ~s~P~w~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~rvn~~k~~~~~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~ 304 (528)
.++|+||+++|.+.||+ ++++++++++++|| +++|||++| + +++.+.+. +... ....+++++.++ . +
T Consensus 6 ~~~P~w~~~~~~~~~g~-e~~~~~~a~~~~~~~~~lRvN~lk-~--~~~~~~~~---~~~~~~~~~~~~~~~~~-~-~-- 74 (456)
T 3m4x_A 6 TTLPQQFIKKYRLLLGE-EASDFFSALEQGSVKKGFRWNPLK-P--AGLDMVQT---YHSEELQPAPYSNEGFL-G-T-- 74 (456)
T ss_dssp -CCCHHHHHHHHHHHGG-GHHHHHHHHHHCCCCCEEECCTTS-T--THHHHHHH---HTCSSCCBCTTCTTEEE-S-C--
T ss_pred hhChHHHHHHHHHHhCH-HHHHHHHHcCCCCCCcEEEEcCcc-H--HHHHHhcC---CcccccCCCCCCcceEE-c-C--
Confidence 57999999999999995 59999999999999 999999999 3 66665442 2211 125678888877 2 2
Q ss_pred chhcccccccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcC
Q 009708 305 NVIQAGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ 384 (528)
Q Consensus 305 ~~~~~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g 384 (528)
.+..++.|.+|++++||++|++++.++++++|++|||+|||||++|+++|+++++.++|+|+|+++.+++.+++|++++|
T Consensus 75 ~~~~~~~~~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g 154 (456)
T 3m4x_A 75 VNGKSFLHQAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG 154 (456)
T ss_dssp CCTTSHHHHTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT
T ss_pred CCCCChHHhCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC
Confidence 23567889999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred CCccEEEEcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 385 VNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 385 ~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+.+ +.++++|+..+.....+.||+|++||||||+|+++++|+++|.++..++..+..+|.++|..++++|||||+||||
T Consensus 155 ~~n-v~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYs 233 (456)
T 3m4x_A 155 VSN-AIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYS 233 (456)
T ss_dssp CSS-EEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCc-eEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 986 8999999988764345789999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCchhhHHHHHHHHhhCCCceEecCCCCCC-----Cccc---cCCceEEEcCCCCCCCceEEEEEEec
Q 009708 465 TCSIDPEENEERVEAFLLRHPEFSIDPADGLVP-----SDFV---TKHGFFFSDPIKHSLDGAFAARLVRA 527 (528)
Q Consensus 465 Tcs~~~~Ene~~v~~~l~~~~~~~~~~~~~~~~-----~~~~---~~~g~~~~~P~~~~~dGff~a~l~k~ 527 (528)
|||++++|||++|.+|+++|+ |++.++..... ..+. ...++++++||.+++||||+|+|+|.
T Consensus 234 TCs~~~eEne~vv~~~l~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGFF~A~l~k~ 303 (456)
T 3m4x_A 234 TCTFAPEENEEIISWLVENYP-VTIEEIPLTQSVSSGRSEWGSVAGLEKTIRIWPHKDQGEGHFVAKLTFH 303 (456)
T ss_dssp ESCCCGGGTHHHHHHHHHHSS-EEEECCCCSSCCEECCGGGSSSTTGGGSEEECTTTSSSSCEEEEEEEEC
T ss_pred EeecccccCHHHHHHHHHhCC-CEEEeccccccccccccccccccccCCeEEECCCCCCCcCeEEEEEEEC
Confidence 999999999999999999999 99988753211 0111 23468999999999999999999984
No 7
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=1.8e-49 Score=403.59 Aligned_cols=270 Identities=26% Similarity=0.352 Sum_probs=217.6
Q ss_pred CCCCCeEEEEcCCCCCCHHHHHHHHhhcCCCCCc----------------eecccCCceEEeeCCccchhccccccccee
Q 009708 254 NSDPSFSLRANSRKGVTRADLVMQLNLLKLQVPH----------------ELSLHLDEFIRVKTGLQNVIQAGLLKEGLC 317 (528)
Q Consensus 254 ~~~~~~~~rvn~~k~~~~~~~~~~L~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 317 (528)
+.++|+++|||++| .+++++++.|++.|+.... ..++++++.+.+..+. .+..++.|++|++
T Consensus 7 ~~~~p~~lRvN~lk-~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~-~~~~~~~~~~G~~ 84 (309)
T 2b9e_A 7 ASQLPRFVRVNTLK-TCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQT-DLHEHPLYRAGHL 84 (309)
T ss_dssp --CCCEEEEECTTT-CCHHHHHHHHHHTTCEEEEECSSHHHHHTCCTTEEEECSSSTTEEEECTTC-CCTTSHHHHTTSE
T ss_pred CCCCCeEEEEeCCC-CCHHHHHHHHHhCCCeeeeccccccccccccccccccccCCCceEEeCCCC-CcccChHHHCCeE
Confidence 46789999999999 7999999999987763211 1124556677775432 4667889999999
Q ss_pred EeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccc
Q 009708 318 AVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR 397 (528)
Q Consensus 318 ~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~ 397 (528)
++||.+|++++.++++++|++|||+|||||++|+++|+.+++.++|+|+|+++.+++.+++|++++|+.+ ++++++|+.
T Consensus 85 ~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~-v~~~~~D~~ 163 (309)
T 2b9e_A 85 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSC-CELAEEDFL 163 (309)
T ss_dssp EECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEECCGG
T ss_pred EEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEeCChH
Confidence 9999999999999999999999999999999999999998878999999999999999999999999986 899999998
Q ss_pred cccccC--CCCCCEEEEcCCCCCCccccCCchhhccC--CHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhh
Q 009708 398 TFADNS--TVKCDKVLLDAPCSGLGVLSKRADLRWNR--RLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEEN 473 (528)
Q Consensus 398 ~~~~~~--~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~--~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~En 473 (528)
.+.... ..+||+|++||||||+|+++++||++|.. +++++..+..+|.++|++|+++++ ||+|||+|||++++||
T Consensus 164 ~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~En 242 (309)
T 2b9e_A 164 AVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEEN 242 (309)
T ss_dssp GSCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGT
T ss_pred hcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHh
Confidence 865422 14799999999999999999999999864 677899999999999999999997 9999999999999999
Q ss_pred HHHHHHHHhhCCC-ceEecCCCCCCCc----cccCCceEEEcCCCCCCCceEEEEEEec
Q 009708 474 EERVEAFLLRHPE-FSIDPADGLVPSD----FVTKHGFFFSDPIKHSLDGAFAARLVRA 527 (528)
Q Consensus 474 e~~v~~~l~~~~~-~~~~~~~~~~~~~----~~~~~g~~~~~P~~~~~dGff~a~l~k~ 527 (528)
+++|.+||++|++ |+++++...++.. +....++++++||.+++||||+|+|+|.
T Consensus 243 e~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGfF~A~l~k~ 301 (309)
T 2b9e_A 243 EDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIERV 301 (309)
T ss_dssp HHHHHHHHTTSTTTEEECCCCTTCCCBCCSSSTTGGGSEEECHHHHSSCSEEEEEEEEC
T ss_pred HHHHHHHHHhCCCcEEEeccccccccccccccCCCCCeEEECCCCCCCCCeEEEEEEEC
Confidence 9999999999999 9998775433321 1124578999999999999999999985
No 8
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=8.9e-47 Score=389.44 Aligned_cols=295 Identities=22% Similarity=0.225 Sum_probs=230.8
Q ss_pred HHHhhhcChHHHHHHHHHHhCHHHHHHHHHhcCCCCCeEEEEcCCCCCCHHHHHHHHhhcCCCC----------------
Q 009708 222 ALATIYSHPVWMVRRWTKYLGQEEAIKLMVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKLQV---------------- 285 (528)
Q Consensus 222 ~ls~~~s~P~w~~~~~~~~~g~~~~~~~~~~~~~~~~~~~rvn~~k~~~~~~~~~~L~~~~~~~---------------- 285 (528)
.++..| |-+.+.+.||+ ++..+..++.++++..+|+|+.+ +.+++...|+..|...
T Consensus 17 ~~al~~-----Fd~~Y~~~~G~-~W~~~r~aL~~~~~~~a~vN~f~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 88 (359)
T 4fzv_A 17 RLALQN-----FDMTYSVQFGD-LWPSIRVSLLSEQKYGALVNNFA--AWDHVSAKLEQLSAKDFVNEAISHWELQSEGG 88 (359)
T ss_dssp HHHHHH-----HHHHHHHHHGG-GHHHHHHHHTSCCCCEEEECTTS--CHHHHHHHHHHTTCEEHHHHHHHTTTCCC---
T ss_pred HHHHHH-----HHHHHHHHhhh-hhHHHHHHHcCcchhEEEeccCC--ChHHHHHHHHhccCccchhhhhcccccccccc
Confidence 455555 67777888884 68889999999999999999985 6788888888755310
Q ss_pred ----CceecccCCc---eEEeeCCccchhccc-----ccccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHH
Q 009708 286 ----PHELSLHLDE---FIRVKTGLQNVIQAG-----LLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYM 353 (528)
Q Consensus 286 ----~~~~~~~~~~---~~~~~~~~~~~~~~~-----~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~l 353 (528)
+.....+.+. .+..+.+ ++...+ .+.-+.|++||.+|++++.+|+++||++|||+||||||||+++
T Consensus 89 ~~~~p~~~~~~~~~~l~~~~~~~g--~~~~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~l 166 (359)
T 4fzv_A 89 QSAAPSPASWACSPNLRCFTFDRG--DISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLAL 166 (359)
T ss_dssp --CCSSCHHHHSCSSCCEEECCTT--CCCCCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHH
T ss_pred cccCCCcccccCCccceEEecCCC--ChhcCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHH
Confidence 0000001111 1222222 222333 3444568889999999999999999999999999999999999
Q ss_pred HHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCC-----ccEEEEcCccccccccCCCCCCEEEEcCCCCCC--ccccCCc
Q 009708 354 ASCLSGQGLVYAIDINKGRLRILNETAKLHQVN-----SVIRTIHADLRTFADNSTVKCDKVLLDAPCSGL--GVLSKRA 426 (528)
Q Consensus 354 a~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~-----~~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~--G~~~~~p 426 (528)
++.+ +.+.|+|+|+++.+++.+++|++++|.. +++.+.+.|+..+.....+.||+||+||||||+ |+++++|
T Consensus 167 a~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~ 245 (359)
T 4fzv_A 167 LQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEEN 245 (359)
T ss_dssp HHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTT
T ss_pred HHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccCh
Confidence 9975 4578999999999999999999999874 348899999998876556789999999999997 7889999
Q ss_pred hhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCCceEecCCCCCC---------
Q 009708 427 DLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPEFSIDPADGLVP--------- 497 (528)
Q Consensus 427 d~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~~~~~~~~--------- 497 (528)
+++|+++..++..+..+|.+||.+|+++|||||+|||||||++++|||+||++||++++++...++.....
T Consensus 246 ~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~l~~~~~~~~~ 325 (359)
T 4fzv_A 246 NIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMD 325 (359)
T ss_dssp CTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHTT
T ss_pred hhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCCCCccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999988754433211100
Q ss_pred C-cc-ccCCceEEEcCCCC-CCCceEEEEEEec
Q 009708 498 S-DF-VTKHGFFFSDPIKH-SLDGAFAARLVRA 527 (528)
Q Consensus 498 ~-~~-~~~~g~~~~~P~~~-~~dGff~a~l~k~ 527 (528)
. .+ ....+..+++||.+ +++|||+|+|+|.
T Consensus 326 ~~~~~~~~~~g~r~~P~~~~~~gGFFiA~L~Kv 358 (359)
T 4fzv_A 326 TFCFFSSCQVGELVIPNLMANFGPMYFCKMRRL 358 (359)
T ss_dssp TCEECTTCSSSEEEECBTTBCCCCEEEEEEEEC
T ss_pred ccccCccccceEEECCCCCCCCCCEEEEEEEEC
Confidence 0 00 11223368999976 5678999999985
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=1.4e-43 Score=354.89 Aligned_cols=266 Identities=29% Similarity=0.354 Sum_probs=212.7
Q ss_pred HHhcCCCCCeEEEEcCCCCCCHHHHHHHHhhcCCCCCceecccCCceEEeeCCccchhcccccccceeEeecchHHHHHH
Q 009708 250 MVWNNSDPSFSLRANSRKGVTRADLVMQLNLLKLQVPHELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLVVA 329 (528)
Q Consensus 250 ~~~~~~~~~~~~rvn~~k~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~~s~l~~~ 329 (528)
|+.+++++|+++|||++| .+++++.+.|++.|+. .+. ++.++.+.+......+...+.|.+|.+++||.++++++.
T Consensus 2 m~~~~~~~~~~~rvn~~~-~~~~~~~~~l~~~g~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~ 77 (274)
T 3ajd_A 2 MIVYKGEKMQFIRVNTLK-INPEVLKKRLENKGVV--LEK-TFLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISSMIPPI 77 (274)
T ss_dssp -------CCEEEEECTTT-CCHHHHHHHHHTTTCE--EEE-CSSTTEEEEEECSSCTTSSHHHHTTSEEECCSGGGHHHH
T ss_pred hhhhCCCCCeEEEEeCCC-CCHHHHHHHHHHCCCe--ecC-CCCCceEEEecCCCCcccChhhhCCeEEEeCHHHHHHHH
Confidence 445678899999999999 7999999999986653 344 778888887322124566788999999999999999999
Q ss_pred hcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---CCCC
Q 009708 330 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---STVK 406 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---~~~~ 406 (528)
++++++|++|||+|||+|++|+++++.+++.++|+|+|+++.+++.+++|++++|+.+ ++++++|+..+... ..++
T Consensus 78 ~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~~ 156 (274)
T 3ajd_A 78 VLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLN-TIIINADMRKYKDYLLKNEIF 156 (274)
T ss_dssp HHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCHHHHHHHHHHTTCC
T ss_pred HhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCc-EEEEeCChHhcchhhhhcccc
Confidence 9999999999999999999999999988766899999999999999999999999985 99999999887542 1468
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCC
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPE 486 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~ 486 (528)
||+|++||||||+|+++++| .++.+++..+...|.++|++++++|||||+|+|+|||++++||+++|.+|+++|++
T Consensus 157 fD~Vl~d~Pcs~~g~~~~~p----~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~~ 232 (274)
T 3ajd_A 157 FDKILLDAPCSGNIIKDKNR----NVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRND 232 (274)
T ss_dssp EEEEEEEECCC----------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCSS
T ss_pred CCEEEEcCCCCCCcccccCC----CCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhCCC
Confidence 99999999999999999987 35677888888999999999999999999999999999999999999999999999
Q ss_pred ceEecCCCCCCCc---c-ccCCceEEEcCCCCCCCceEEEEEEec
Q 009708 487 FSIDPADGLVPSD---F-VTKHGFFFSDPIKHSLDGAFAARLVRA 527 (528)
Q Consensus 487 ~~~~~~~~~~~~~---~-~~~~g~~~~~P~~~~~dGff~a~l~k~ 527 (528)
|++.++......+ + ....|+++++||.++ ||+|+|+|.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~---ff~a~l~k~ 274 (274)
T 3ajd_A 233 VELIIIKANEFKGINIKEGYIKGTLRVFPPNEP---FFIAKLRKI 274 (274)
T ss_dssp EEEECCCSTTCTTSCEEECSSTTCEEECTTSCC---EEEEEEEEC
T ss_pred cEEecCccccccCcccccccCCCeEEECCCCCC---EEEEEEEEC
Confidence 9998775211111 1 123678999998764 999999984
No 10
>1tzv_A NUSB protein, N utilization substance protein B homolog; RNA-protein interaction, transcriptional antitermination, transcription regulation; 1.35A {Thermotoga maritima} SCOP: a.79.1.1 PDB: 1tzu_A 1tzt_A 1tzw_A 1tzx_A*
Probab=99.96 E-value=2.2e-29 Score=227.09 Aligned_cols=128 Identities=19% Similarity=0.249 Sum_probs=116.2
Q ss_pred ChHHHHHHHHHHHHHhCCC-chHHHhhcCCCCCCCccchhhhhcccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009708 58 SPHRAVSAVRLMRIQFGGA-FADLLNKKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDHLICLL 136 (528)
Q Consensus 58 ~~aR~~A~~~Ly~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lv~gv~~~~~~LD~~i~~~ 136 (528)
+.+|+.|+|+||+++.++. +++.+.... .+ ..+++.|++|+++||+||++++..||++|+++
T Consensus 6 ~~aR~~A~~~L~~~~~~~~~~~~~~l~~~----------------~~-~~l~~~d~~~~~~Lv~gvl~~~~~lD~~I~~~ 68 (142)
T 1tzv_A 6 RRMRLAVFKALFQHEFRRDEDLEQILEEI----------------LD-ETYDKKAKEDARRYIRGIKENLSMIDDLISRY 68 (142)
T ss_dssp HHHHHHHHHHHHHHTTCTTSCHHHHHHHH----------------CC-TTSCHHHHHHHHHHHHHHHHTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHH----------------HH-hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3789999999999999888 777766542 22 45789999999999999999999999999999
Q ss_pred ccCCCCCCcccHHHHHHHHHHHHHHHhc-CCCCchhHHHHHHHHHHhcCCCchhhHHHHHHHHHhhcC
Q 009708 137 CHDEKTFSSMEPLLLQILRIGFYEIVKL-DMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKD 203 (528)
Q Consensus 137 l~~~~~~~~l~~~~~~iLrlg~~el~~~-~~p~~~~inEaV~lak~~~~~~~~~fVN~VL~~~~r~~~ 203 (528)
+++ |+++++++++++|||+|+|||+|+ ++|++++|||||+|||+|+++++++|||||||+++++..
T Consensus 69 l~~-w~l~rl~~~~r~iLrla~yEl~~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVL~~i~r~~~ 135 (142)
T 1tzv_A 69 LEK-WSLNRLSVVDRNVLRLATYELLFEKDIPIEVTIDEAIEIAKRYGTENSGKFVNGILDRIAKEHA 135 (142)
T ss_dssp CSS-SCGGGSCHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHC
T ss_pred cCC-CChHHCCHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHhc
Confidence 987 999999999999999999999998 599999999999999999999999999999999998653
No 11
>3d3b_A Protein NUSB, N utilization substance protein B; NUSB, NUSE, NUT site, phage lambda, lambdan antitermina antitermination; HET: NHE; 1.30A {Escherichia coli} PDB: 3d3c_A 3imq_A 1ey1_A
Probab=99.96 E-value=1.4e-29 Score=228.19 Aligned_cols=127 Identities=22% Similarity=0.302 Sum_probs=112.4
Q ss_pred ChHHHHHHHHHHHHHhCCCchHHHhhcCCCCCCCccchhhhhcccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009708 58 SPHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDHLICLLC 137 (528)
Q Consensus 58 ~~aR~~A~~~Ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lv~gv~~~~~~LD~~i~~~l 137 (528)
+.+|+.|+|+||+++..+...+.+...+ ++...+++.|++|+++||+||++++..||++|++++
T Consensus 9 ~~aR~~A~~~L~~~~~~~~~~~~~~~~~----------------~~~~~l~~~d~~~~~~Lv~gvl~~~~~lD~~I~~~l 72 (141)
T 3d3b_A 9 RRARECAVQALYSWQLSQNDIADVEYQF----------------LAEQDVKDVDVLYFRELLAGVATNTAYLDGLMKPYL 72 (141)
T ss_dssp HHHHHHHHHHHHHHHHHCCCHHHHHHHH----------------HHHSCCTTSCHHHHHHHHHHHHHTHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHH----------------HHhccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Confidence 3689999999999988776665554331 112346778999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHHHHHHHhc-CCCCchhHHHHHHHHHHhcCCCchhhHHHHHHHHHhhc
Q 009708 138 HDEKTFSSMEPLLLQILRIGFYEIVKL-DMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLK 202 (528)
Q Consensus 138 ~~~~~~~~l~~~~~~iLrlg~~el~~~-~~p~~~~inEaV~lak~~~~~~~~~fVN~VL~~~~r~~ 202 (528)
+ |+++++++++++|||+|+|||+|+ ++|++++|||||+|||+|+++++++|||||||+++++.
T Consensus 73 ~--~~l~rl~~~~r~iLrla~yEll~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVLr~i~r~~ 136 (141)
T 3d3b_A 73 S--RLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAPVI 136 (141)
T ss_dssp T--TCSSCCCHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH
T ss_pred C--CCHHHcCHHHHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHHHCCCCchHHHHHHHHHHHHHH
Confidence 7 999999999999999999999997 59999999999999999999999999999999999864
No 12
>3r2d_A Protein NUSB, N utilization substance protein B; cross species NUSB-NUSE-RNA interaction; 2.20A {Aquifex aeolicus} PDB: 2jr0_A 3r2c_A* 4eya_A
Probab=99.96 E-value=3.1e-29 Score=227.53 Aligned_cols=130 Identities=22% Similarity=0.214 Sum_probs=113.5
Q ss_pred ChHHHHHHHHHHHHHhCCCchHHHhhcCCCCCCCccchhhhhcccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009708 58 SPHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDHLICLLC 137 (528)
Q Consensus 58 ~~aR~~A~~~Ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lv~gv~~~~~~LD~~i~~~l 137 (528)
+.+|+.|+|+||+++.++.+++.+++.. .. ....+++.|+.|+++||+||++|+..||++|++++
T Consensus 6 ~~aR~~A~q~L~~~~~~~~~~~~~l~~~----------~~-----~~~~~~~~dr~~~~~lv~gvl~~~~~lD~~i~~~l 70 (149)
T 3r2d_A 6 KGARDTAFLVLYRWDLRGENPGELFKEV----------VE-----EKNIKNKDAYEYAKKLVDTAVRHIEEIDSIIEKHL 70 (149)
T ss_dssp HHHHHHHHHHHHHHHHHCCCHHHHHHHH----------HH-----HHTCCCHHHHHHHHHHHHHHHHTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHH----------HH-----hcccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 4789999999999998888888776542 11 11127899999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHHHHHHHhc-CCCCchhHHHHHHHHHHhcCCCchhhHHHHHHHHHhhcC
Q 009708 138 HDEKTFSSMEPLLLQILRIGFYEIVKL-DMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKD 203 (528)
Q Consensus 138 ~~~~~~~~l~~~~~~iLrlg~~el~~~-~~p~~~~inEaV~lak~~~~~~~~~fVN~VL~~~~r~~~ 203 (528)
++ |+++++++++++|||+|+|||+|+ ++|++++|||||+|||.|+++++++||||||++++++..
T Consensus 71 ~~-w~~~rl~~~~r~iLrla~yEl~~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVLr~i~r~~~ 136 (149)
T 3r2d_A 71 KG-WSIDRLGYVERNALRLGVAELIFLKSKEPGRVFIDIVDLVKKYADEKAGKFVNGVLSAIYKAYI 136 (149)
T ss_dssp ----CGGGSCHHHHHHHHHHHHHHTTSCCSCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHC-
T ss_pred cC-CCccccCHHHHHHHHHHHHHHHHcCCCCCeehHHHHHHHHHHhCCCCccccchHHhhHHHHhhc
Confidence 76 999999999999999999999998 599999999999999999999999999999999999754
No 13
>1eyv_A NUSB protein, N-utilizing substance protein B homolog; helical bundle, structural genomics, PSI, protein structure initiative; 1.60A {Mycobacterium tuberculosis} SCOP: a.79.1.1
Probab=99.95 E-value=3.2e-28 Score=222.48 Aligned_cols=132 Identities=23% Similarity=0.290 Sum_probs=108.8
Q ss_pred ChHHHHHHHHHHHHHhCCCchHHHhhcCCCCCCCccchhhhhcccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 009708 58 SPHRAVSAVRLMRIQFGGAFADLLNKKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDHLICLLC 137 (528)
Q Consensus 58 ~~aR~~A~~~Ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lv~gv~~~~~~LD~~i~~~l 137 (528)
+.+|+.|+|+||+++.++.+.+.+.... . .+. ......+.|+.|+++||+||++++..||++|.+++
T Consensus 11 ~~aR~~Alq~L~~~~~~~~~~~~~l~~~----------~--~l~-~~d~~~~~~~~~~~~lv~gvl~~~~~lD~~i~~~l 77 (156)
T 1eyv_A 11 HQARKRAVALLFEAEVRGISAAEVVDTR----------A--ALA-EAKPDIARLHPYTAAVARGVSEHAAHIDDLITAHL 77 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHH----------H--HHH-HHCTTSCCCCHHHHHHHHHHHHTHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHH----------H--hcc-ccccccHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 4689999999999988887766654321 0 000 00112244589999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHHHHHHHhc-CCCCchhHHHHHHHHHHhcCCCchhhHHHHHHHHHhhcC
Q 009708 138 HDEKTFSSMEPLLLQILRIGFYEIVKL-DMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKD 203 (528)
Q Consensus 138 ~~~~~~~~l~~~~~~iLrlg~~el~~~-~~p~~~~inEaV~lak~~~~~~~~~fVN~VL~~~~r~~~ 203 (528)
++ |+++++++++++|||+|+|||+|+ ++|++++|||+|+|||+|+++++++|||||||++.+..+
T Consensus 78 ~~-w~l~rl~~~~r~iLrla~yel~~~~~iP~~v~InEaVelak~~~~~~~~~fVNgVLr~i~r~~~ 143 (156)
T 1eyv_A 78 RG-WTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFVNGVLGQVMLVTP 143 (156)
T ss_dssp TT-CCGGGSCHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHC----
T ss_pred cC-CChhhCCHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHhCCCccccchHHHHHHHHHhHH
Confidence 76 999999999999999999999998 599999999999999999999999999999999998754
No 14
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.79 E-value=5.6e-19 Score=184.88 Aligned_cols=161 Identities=24% Similarity=0.254 Sum_probs=130.3
Q ss_pred ccccccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCcc
Q 009708 309 AGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSV 388 (528)
Q Consensus 309 ~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~ 388 (528)
...++.|.|..|.....++..++ ++|.+|||+|||+|++++++|.. +..|+|+|+|+.+++.+++|++.+|+.+
T Consensus 190 ~~~~~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~~- 263 (393)
T 4dmg_A 190 ALAQKTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLRV- 263 (393)
T ss_dssp TTCCTTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCC-
T ss_pred hhccccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCCC-
Confidence 45678999999999988887664 36899999999999999999985 3459999999999999999999999985
Q ss_pred EEEEcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 389 IRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 389 i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
.+.++|+.++.....+.||+|++||||.. .+..++......|.+++..+.++|||||+|+|++|+.
T Consensus 264 -~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~-------------~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 264 -DIRHGEALPTLRGLEGPFHHVLLDPPTLV-------------KRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp -EEEESCHHHHHHTCCCCEEEEEECCCCCC-------------SSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred -cEEEccHHHHHHHhcCCCCEEEECCCcCC-------------CCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 45699998876443345999999999943 2234677788889999999999999999999999999
Q ss_pred CchhhH--HHHHHHHh-hCCCceE
Q 009708 469 DPEENE--ERVEAFLL-RHPEFSI 489 (528)
Q Consensus 469 ~~~Ene--~~v~~~l~-~~~~~~~ 489 (528)
+..+++ +.+...+. ....+++
T Consensus 330 ~~~~~~f~~~v~~a~~~~g~~~~i 353 (393)
T 4dmg_A 330 HLRLEDLLEVARRAAADLGRRLRV 353 (393)
T ss_dssp TSCHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCeEEE
Confidence 887665 55655554 3334443
No 15
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.74 E-value=7.5e-18 Score=162.22 Aligned_cols=169 Identities=16% Similarity=0.142 Sum_probs=129.7
Q ss_pred EeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccc
Q 009708 318 AVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR 397 (528)
Q Consensus 318 ~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~ 397 (528)
.+++..+.++..++...++.+|||+|||+|..++.+++.+++.++|+++|+++.+++.+++|++.+|+.++++++++|+.
T Consensus 41 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 120 (221)
T 3u81_A 41 NVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQ 120 (221)
T ss_dssp GCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred ccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHH
Confidence 34566667777776666788999999999999999998776678999999999999999999999999878999999997
Q ss_pred cccccCC-----CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchh
Q 009708 398 TFADNST-----VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEE 472 (528)
Q Consensus 398 ~~~~~~~-----~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~E 472 (528)
+..+... ++||+|++|+++.. . ....+++..+ ++|||||+|++.+|.....
T Consensus 121 ~~l~~~~~~~~~~~fD~V~~d~~~~~------------------~----~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~- 176 (221)
T 3u81_A 121 DLIPQLKKKYDVDTLDMVFLDHWKDR------------------Y----LPDTLLLEKC-GLLRKGTVLLADNVIVPGT- 176 (221)
T ss_dssp HHGGGTTTTSCCCCCSEEEECSCGGG------------------H----HHHHHHHHHT-TCCCTTCEEEESCCCCCCC-
T ss_pred HHHHHHHHhcCCCceEEEEEcCCccc------------------c----hHHHHHHHhc-cccCCCeEEEEeCCCCcch-
Confidence 7544332 58999999976621 1 1123456666 9999999999998885432
Q ss_pred hHHHHHHHHhhCCCceEecCCCCCCCccccCCceEEEcCCCCCCCceEEEEEEe
Q 009708 473 NEERVEAFLLRHPEFSIDPADGLVPSDFVTKHGFFFSDPIKHSLDGAFAARLVR 526 (528)
Q Consensus 473 ne~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~dGff~a~l~k 526 (528)
..+.+++..+++|+...++ ..+|.....|||++++++.
T Consensus 177 --~~~~~~l~~~~~~~~~~~~--------------~~~~~~~~~dG~~~~~~~g 214 (221)
T 3u81_A 177 --PDFLAYVRGSSSFECTHYS--------------SYLEYMKVVDGLEKAIYQG 214 (221)
T ss_dssp --HHHHHHHHHCTTEEEEEEE--------------EEETTTTEEEEEEEEEECC
T ss_pred --HHHHHHHhhCCCceEEEcc--------------cccccCCCCCceEEEEEeC
Confidence 3456788888887765431 1245555679999998763
No 16
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.74 E-value=1.8e-17 Score=162.79 Aligned_cols=165 Identities=16% Similarity=0.228 Sum_probs=123.4
Q ss_pred cchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc
Q 009708 321 DESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA 400 (528)
Q Consensus 321 d~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~ 400 (528)
+..+.++..++...++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++++++.|+.++++++++|+.+..
T Consensus 49 ~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l 128 (248)
T 3tfw_A 49 ANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSL 128 (248)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 44555555555556788999999999999999999876578999999999999999999999999877999999998754
Q ss_pred ccC--CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC--------c
Q 009708 401 DNS--TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID--------P 470 (528)
Q Consensus 401 ~~~--~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~--------~ 470 (528)
+.. .++||+|++|+++. . +..+++.+.++|||||+|++.++.+. .
T Consensus 129 ~~~~~~~~fD~V~~d~~~~------------------~-------~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~ 183 (248)
T 3tfw_A 129 ESLGECPAFDLIFIDADKP------------------N-------NPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSA 183 (248)
T ss_dssp HTCCSCCCCSEEEECSCGG------------------G-------HHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCC
T ss_pred HhcCCCCCeEEEEECCchH------------------H-------HHHHHHHHHHhcCCCeEEEEeCCCcCCcccCcccc
Confidence 433 24899999998752 1 12358889999999999999888754 1
Q ss_pred hhhHHHH---HHHHhhCCCceEecCCCCCCCccccCCceEEEcCC-CCCCCceEEEEEEec
Q 009708 471 EENEERV---EAFLLRHPEFSIDPADGLVPSDFVTKHGFFFSDPI-KHSLDGAFAARLVRA 527 (528)
Q Consensus 471 ~Ene~~v---~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~-~~~~dGff~a~l~k~ 527 (528)
.+....+ ..++..+++|+...+. |. ..+.|||++|++++.
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~l~-----------------~~g~~~~DG~~i~~~~~~ 227 (248)
T 3tfw_A 184 DERVQGVRQFIEMMGAEPRLTATALQ-----------------TVGTKGWDGFTLAWVNAA 227 (248)
T ss_dssp CHHHHHHHHHHHHHHHCTTEEEEEEE-----------------ECSTTCSEEEEEEEECCC
T ss_pred chHHHHHHHHHHHHhhCCCEEEEEee-----------------cCCCCCCCeeEEEEEeCC
Confidence 2222233 3445567777654321 11 234699999988763
No 17
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.72 E-value=1.3e-16 Score=157.47 Aligned_cols=166 Identities=17% Similarity=0.228 Sum_probs=115.0
Q ss_pred cceeEeecch-------HHHHHHhcCCC-CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCC
Q 009708 314 EGLCAVQDES-------AGLVVAVVDPQ-PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV 385 (528)
Q Consensus 314 ~G~~~~Qd~~-------s~l~~~~l~~~-~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~ 385 (528)
.+..+.|+.. +.++..++.+. ++.+|||+|||+|..++.+++.. .++|+|+|+++.+++.+++|++.+++
T Consensus 20 ~~~~i~q~~~~~~~~~d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~--~~~v~gvDi~~~~~~~a~~n~~~~~~ 97 (259)
T 3lpm_A 20 ENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT--KAKIVGVEIQERLADMAKRSVAYNQL 97 (259)
T ss_dssp TTEEEEEBTTTBCCCHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC--CCEEEEECCSHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCCccCcHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc--CCcEEEEECCHHHHHHHHHHHHHCCC
Confidence 4445556554 77888888888 89999999999999999999862 34999999999999999999999999
Q ss_pred CccEEEEcCccccccccC-CCCCCEEEEcCCCCCC-ccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEE
Q 009708 386 NSVIRTIHADLRTFADNS-TVKCDKVLLDAPCSGL-GVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVY 463 (528)
Q Consensus 386 ~~~i~~~~~D~~~~~~~~-~~~fD~Vl~D~Pcsg~-G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvy 463 (528)
.++++++++|+.++.... .++||+|++|||+... +.-...++..+.. ...........+++.+.++|||||++++
T Consensus 98 ~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~---a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 98 EDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRI---ARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp TTTEEEECSCGGGGGGTSCTTCEEEEEECCCC--------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHh---hhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 878999999999876532 4789999999999655 1111222111110 0111122345789999999999999997
Q ss_pred EcCCCCchhhHHHHHHHHhhCCCceE
Q 009708 464 STCSIDPEENEERVEAFLLRHPEFSI 489 (528)
Q Consensus 464 sTcs~~~~Ene~~v~~~l~~~~~~~~ 489 (528)
.. +.+....+...+.++ +|.+
T Consensus 175 ~~----~~~~~~~~~~~l~~~-~~~~ 195 (259)
T 3lpm_A 175 VH----RPERLLDIIDIMRKY-RLEP 195 (259)
T ss_dssp EE----CTTTHHHHHHHHHHT-TEEE
T ss_pred EE----cHHHHHHHHHHHHHC-CCce
Confidence 43 233334455566654 3443
No 18
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.72 E-value=1.7e-17 Score=173.43 Aligned_cols=160 Identities=25% Similarity=0.253 Sum_probs=128.3
Q ss_pred cccccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccE
Q 009708 310 GLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVI 389 (528)
Q Consensus 310 ~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i 389 (528)
..+..|+|..|.....++..+ ++.+|||+|||+|++++.++.. ..+|+++|+++.+++.+++|++.+|+++ +
T Consensus 188 ~~~~~g~f~~~~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~ 259 (382)
T 1wxx_A 188 AGQKTGAYLDQRENRLYMERF----RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGN-V 259 (382)
T ss_dssp TTSCCCCCGGGHHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTT-E
T ss_pred hcccCccccchHHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCC-c
Confidence 456778888887776665544 6789999999999999999986 4789999999999999999999999987 9
Q ss_pred EEEcCccccccccC---CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 390 RTIHADLRTFADNS---TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 390 ~~~~~D~~~~~~~~---~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
+++++|+.++.... ..+||+|++|||+.+.+ ...+......+.+++..+.++|+|||+|++++|
T Consensus 260 ~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~-------------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 260 RVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKG-------------KKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCS-------------TTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred eEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCC-------------hhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 99999998865421 46899999999995422 234566677888999999999999999999999
Q ss_pred CCCchhh--HHHHHHHH-hhCCCceEe
Q 009708 467 SIDPEEN--EERVEAFL-LRHPEFSID 490 (528)
Q Consensus 467 s~~~~En--e~~v~~~l-~~~~~~~~~ 490 (528)
+.+..++ .+.+...+ +....+++.
T Consensus 327 ~~~~~~~~~~~~i~~~~~~~g~~~~~i 353 (382)
T 1wxx_A 327 SHHMTEPLFYAMVAEAAQDAHRLLRVV 353 (382)
T ss_dssp CTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 9776654 45555444 444556554
No 19
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.72 E-value=1.9e-17 Score=159.25 Aligned_cols=166 Identities=15% Similarity=0.182 Sum_probs=122.6
Q ss_pred ecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccc
Q 009708 320 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 399 (528)
Q Consensus 320 Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~ 399 (528)
++..+.++..++...++.+|||+|||+|..+.++++.+++.++|+++|+++.+++.+++++++.|+.++++++++|+.+.
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 122 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDS 122 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 34455566666555678899999999999999999987656899999999999999999999999988899999999775
Q ss_pred cccC----CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCc-----
Q 009708 400 ADNS----TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDP----- 470 (528)
Q Consensus 400 ~~~~----~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~----- 470 (528)
.... ..+||+|++|+++. . +..+++.+.++|||||+|++.++.+..
T Consensus 123 ~~~~~~~~~~~fD~v~~d~~~~------------------~-------~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~ 177 (223)
T 3duw_A 123 LQQIENEKYEPFDFIFIDADKQ------------------N-------NPAYFEWALKLSRPGTVIIGDNVVREGEVIDN 177 (223)
T ss_dssp HHHHHHTTCCCCSEEEECSCGG------------------G-------HHHHHHHHHHTCCTTCEEEEESCSGGGGGGCT
T ss_pred HHHHHhcCCCCcCEEEEcCCcH------------------H-------HHHHHHHHHHhcCCCcEEEEeCCCcCCcccCc
Confidence 4321 15799999998862 1 234688999999999999987765441
Q ss_pred ---hhhHHH---HHHHHhhCCCceEecCCCCCCCccccCCceEEEcCCCCCCCceEEEEEEe
Q 009708 471 ---EENEER---VEAFLLRHPEFSIDPADGLVPSDFVTKHGFFFSDPIKHSLDGAFAARLVR 526 (528)
Q Consensus 471 ---~Ene~~---v~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~dGff~a~l~k 526 (528)
.+.... +..++..++++....++ + +...+.|||++|+++|
T Consensus 178 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p---------------~-~~~~~~dG~~~~~~~~ 223 (223)
T 3duw_A 178 TSNDPRVQGIRRFYELIAAEPRVSATALQ---------------T-VGSKGYDGFIMAVVKE 223 (223)
T ss_dssp TCCCHHHHHHHHHHHHHHHCTTEEEEEEE---------------E-EETTEEEEEEEEEEC-
T ss_pred cccchHHHHHHHHHHHHhhCCCeEEEEEe---------------c-cCCCCCCeeEEEEEeC
Confidence 122223 33445567776543221 1 1145679999999875
No 20
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.70 E-value=5.2e-17 Score=170.40 Aligned_cols=164 Identities=24% Similarity=0.215 Sum_probs=127.9
Q ss_pred cccccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccE
Q 009708 310 GLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVI 389 (528)
Q Consensus 310 ~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i 389 (528)
..++.|.|..|.....++..++ +++++|||+|||+|++++.++.. +..+|+|+|+++.+++.+++|++.+|+++++
T Consensus 194 ~~~~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v 269 (396)
T 2as0_A 194 RGQKTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVEDRM 269 (396)
T ss_dssp SSSSSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCGGGE
T ss_pred cccccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccc
Confidence 3466788877777776666553 47889999999999999999975 4569999999999999999999999997569
Q ss_pred EEEcCcccccccc---CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 390 RTIHADLRTFADN---STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 390 ~~~~~D~~~~~~~---~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
+++++|+.++... ...+||+|++|||+.+. +...+......+..++..+.++|+|||+|+|++|
T Consensus 270 ~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~-------------~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 270 KFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQ-------------HEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCCCSCS-------------SGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred eEEECCHHHHHHHHHhhCCCCCEEEECCCCCCC-------------CHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 9999999876542 14689999999998542 2245566677788899999999999999999999
Q ss_pred CCCchh--hHHHHHHHHhh-CCCceEe
Q 009708 467 SIDPEE--NEERVEAFLLR-HPEFSID 490 (528)
Q Consensus 467 s~~~~E--ne~~v~~~l~~-~~~~~~~ 490 (528)
+.+..+ .++.+...... ...+++.
T Consensus 337 ~~~~~~~~~~~~v~~~~~~~~~~~~~i 363 (396)
T 2as0_A 337 SQHVDLQMFKDMIIAAGAKAGKFLKML 363 (396)
T ss_dssp CTTSCHHHHHHHHHHHHHHTTEEEEES
T ss_pred CCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 976544 34555544433 3344444
No 21
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.70 E-value=6.6e-17 Score=157.12 Aligned_cols=132 Identities=18% Similarity=0.183 Sum_probs=102.4
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc--CCCCCCE
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STVKCDK 409 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~--~~~~fD~ 409 (528)
.+++|++|||+|||||++|.++|+.+++.|+|+|+|+++.+++.+.+.++.. .| +.++++|+...... ..++||+
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~n-v~~i~~Da~~~~~~~~~~~~~D~ 149 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PN-IFPLLADARFPQSYKSVVENVDV 149 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TT-EEEEECCTTCGGGTTTTCCCEEE
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CC-eEEEEcccccchhhhccccceEE
Confidence 3789999999999999999999999888899999999999987766665543 34 88999999865321 2468999
Q ss_pred EEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHH-HHHHhccCcCCCEEEEE---cC---CCCchhhHHHHHHHHh
Q 009708 410 VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDEL-LDAASLLVKPGGVLVYS---TC---SIDPEENEERVEAFLL 482 (528)
Q Consensus 410 Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~l-L~~a~~~LkpGG~Lvys---Tc---s~~~~Ene~~v~~~l~ 482 (528)
|++|.+. | .|.++ +..+.++|||||+|+++ +| +..++||.+.+.++|+
T Consensus 150 I~~d~a~---------~----------------~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~ 204 (232)
T 3id6_C 150 LYVDIAQ---------P----------------DQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLE 204 (232)
T ss_dssp EEECCCC---------T----------------THHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHH
T ss_pred EEecCCC---------h----------------hHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHH
Confidence 9999764 1 12333 44556699999999976 88 8999999988889999
Q ss_pred hCCCceEecC
Q 009708 483 RHPEFSIDPA 492 (528)
Q Consensus 483 ~~~~~~~~~~ 492 (528)
+++ |++...
T Consensus 205 ~~g-f~~~~~ 213 (232)
T 3id6_C 205 NSN-FETIQI 213 (232)
T ss_dssp HTT-EEEEEE
T ss_pred HCC-CEEEEE
Confidence 884 877653
No 22
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.70 E-value=2.7e-17 Score=172.64 Aligned_cols=164 Identities=16% Similarity=0.128 Sum_probs=125.8
Q ss_pred ccccccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCC-Cc
Q 009708 309 AGLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV-NS 387 (528)
Q Consensus 309 ~~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~-~~ 387 (528)
...++.|.|..|.....++..+ .+|.+|||+|||+|+++++++.. +..+|+|+|+|+.+++.+++|++.+|+ ++
T Consensus 197 ~~~~~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~ 271 (396)
T 3c0k_A 197 QHGHKTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEALDIARQNVELNKLDLS 271 (396)
T ss_dssp TTSSTTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCGG
T ss_pred cccccCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCcc
Confidence 3457789998888887777776 46889999999999999999985 356999999999999999999999999 64
Q ss_pred cEEEEcCccccccccC---CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 388 VIRTIHADLRTFADNS---TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 388 ~i~~~~~D~~~~~~~~---~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+++++++|+.++.... ..+||+|++|||+.+.+- . .+......+.+++..+.++|+|||+|+++
T Consensus 272 ~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~-----~--------~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 338 (396)
T 3c0k_A 272 KAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENK-----S--------QLMGACRGYKDINMLAIQLLNEGGILLTF 338 (396)
T ss_dssp GEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCS-----S--------SSSCCCTHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCCh-----h--------HHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 5999999998865421 368999999999954321 0 01111223556799999999999999999
Q ss_pred cCCCCch--hhHHHHHHHH-hhCCCceEe
Q 009708 465 TCSIDPE--ENEERVEAFL-LRHPEFSID 490 (528)
Q Consensus 465 Tcs~~~~--Ene~~v~~~l-~~~~~~~~~ 490 (528)
+|+.... ++.+.+...+ +....+++.
T Consensus 339 ~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 367 (396)
T 3c0k_A 339 SCSGLMTSDLFQKIIADAAIDAGRDVQFI 367 (396)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred eCCCcCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 9997654 5566676444 444455544
No 23
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.69 E-value=7.7e-17 Score=160.59 Aligned_cols=159 Identities=12% Similarity=0.082 Sum_probs=116.0
Q ss_pred cceeEeecchHHHHHHhcCC--CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEE
Q 009708 314 EGLCAVQDESAGLVVAVVDP--QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRT 391 (528)
Q Consensus 314 ~G~~~~Qd~~s~l~~~~l~~--~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~ 391 (528)
.|.++.+..+..++..++.. .++.+|||+|||+|..+..++... +..+|+|+|+|+.+++.+++|++.+|+++ +++
T Consensus 86 ~~~~ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~-v~~ 163 (276)
T 2b3t_A 86 PATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKN-IHI 163 (276)
T ss_dssp TTSCCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCS-EEE
T ss_pred CCCcccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEE
Confidence 44444445454444443321 567899999999999999999875 45799999999999999999999999885 999
Q ss_pred EcCccccccccCCCCCCEEEEcCCCCCCc-------cccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 392 IHADLRTFADNSTVKCDKVLLDAPCSGLG-------VLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 392 ~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G-------~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+++|+..... .++||+|++||||.+.+ ++...|...+.-. ......+..+++.+.++|||||++++.
T Consensus 164 ~~~d~~~~~~--~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~----~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 164 LQSDWFSALA--GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAA----DSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp ECCSTTGGGT--TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCH----HHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEcchhhhcc--cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCC----CcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9999987542 36899999999998763 3333444333211 222345577899999999999999987
Q ss_pred cCCCCchhhHHHHHHHHhhC
Q 009708 465 TCSIDPEENEERVEAFLLRH 484 (528)
Q Consensus 465 Tcs~~~~Ene~~v~~~l~~~ 484 (528)
.+... .+.+..++.++
T Consensus 238 ~~~~~----~~~~~~~l~~~ 253 (276)
T 2b3t_A 238 HGWQQ----GEAVRQAFILA 253 (276)
T ss_dssp CCSSC----HHHHHHHHHHT
T ss_pred ECchH----HHHHHHHHHHC
Confidence 65432 33456667664
No 24
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.69 E-value=4.8e-17 Score=182.14 Aligned_cols=152 Identities=16% Similarity=0.258 Sum_probs=121.0
Q ss_pred cccccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCC-cc
Q 009708 310 GLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN-SV 388 (528)
Q Consensus 310 ~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~-~~ 388 (528)
..++.|.|..|.....++.... +|.+|||+|||+|+++++++.. +..+|+++|+|+.+++.+++|++.+|++ ++
T Consensus 517 ~~~~tG~f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~~--ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~ 591 (703)
T 3v97_A 517 DYLDTGLFLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGLG--GARSTTTVDMSRTYLEWAERNLRLNGLTGRA 591 (703)
T ss_dssp SSSSCSCCGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCSTT
T ss_pred ccccCCCcccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccc
Confidence 4567899999999888887764 5889999999999999999873 4568999999999999999999999997 46
Q ss_pred EEEEcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 389 IRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 389 i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
++++++|+.++.....++||+|++||||.+.+. . ..++......+.+++..+.++|+|||+|++++|+-
T Consensus 592 v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~---~--------~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 592 HRLIQADCLAWLREANEQFDLIFIDPPTFSNSK---R--------MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp EEEEESCHHHHHHHCCCCEEEEEECCCSBC------------------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred eEEEecCHHHHHHhcCCCccEEEECCccccCCc---c--------chhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 999999999865544578999999999965322 0 01122344667889999999999999999999995
Q ss_pred CchhhHHHH
Q 009708 469 DPEENEERV 477 (528)
Q Consensus 469 ~~~Ene~~v 477 (528)
....+++.+
T Consensus 661 ~~~~~~~~l 669 (703)
T 3v97_A 661 GFRMDLDGL 669 (703)
T ss_dssp TCCCCHHHH
T ss_pred ccccCHHHH
Confidence 544444433
No 25
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.68 E-value=7e-17 Score=168.83 Aligned_cols=158 Identities=11% Similarity=0.151 Sum_probs=120.5
Q ss_pred cccccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCc-c
Q 009708 310 GLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS-V 388 (528)
Q Consensus 310 ~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~-~ 388 (528)
..++.|.|..|.....++..++ .+|.+|||+|||+|++++.+|.. +..+|+++|+|+.+++.+++|++.+|+++ +
T Consensus 189 ~~~~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~ 264 (385)
T 2b78_A 189 DGLMTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFEANHLDMAN 264 (385)
T ss_dssp SSSCCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHHHTTCCCTT
T ss_pred ccccCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCccc
Confidence 3456788877777777777665 56889999999999999999974 34589999999999999999999999974 5
Q ss_pred EEEEcCccccccccC---CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 389 IRTIHADLRTFADNS---TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 389 i~~~~~D~~~~~~~~---~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
++++++|+.++.... ..+||+|++|||+.+.+. .........+.+++..+.++|+|||+|++++
T Consensus 265 v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~-------------~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 265 HQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNK-------------KEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp EEEEESCHHHHHHHHHHTTCCEEEEEECCCCC------------------CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCCh-------------hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999999998754321 358999999999964221 0112233456778999999999999999999
Q ss_pred CCCCc--hhhHHHHHHHHhhC
Q 009708 466 CSIDP--EENEERVEAFLLRH 484 (528)
Q Consensus 466 cs~~~--~Ene~~v~~~l~~~ 484 (528)
|+... .+..+.+.......
T Consensus 332 ~~~~~~~~~~~~~i~~~~~~~ 352 (385)
T 2b78_A 332 NAANMTVSQFKKQIEKGFGKQ 352 (385)
T ss_dssp CCTTSCHHHHHHHHHHHHTTC
T ss_pred CCCcCCHHHHHHHHHHHHHHc
Confidence 98664 44455665555544
No 26
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.67 E-value=3.9e-17 Score=159.94 Aligned_cols=127 Identities=17% Similarity=0.183 Sum_probs=104.5
Q ss_pred eEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcc
Q 009708 317 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 396 (528)
Q Consensus 317 ~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~ 396 (528)
+.++...+.++..++...++.+|||+|||+|..++.+|+.++++++|+++|+++.+++.++++++..|+.++++++++|+
T Consensus 42 ~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 42 MQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp TSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 44556666777766666667899999999999999999987667899999999999999999999999987799999999
Q ss_pred ccccccC-----CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 397 RTFADNS-----TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 397 ~~~~~~~-----~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
.+..... .++||+|++|++.. . +..+++.+.++|||||+|++.++.+
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~d~~~~------------------~-------~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFIDADKT------------------N-------YLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEEESCGG------------------G-------HHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred HHHHHHHhhccCCCCEeEEEEcCChH------------------H-------hHHHHHHHHHhcCCCeEEEEECCcc
Confidence 8765432 36899999997741 1 1235888999999999999876654
No 27
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.66 E-value=8.1e-17 Score=161.49 Aligned_cols=216 Identities=11% Similarity=0.063 Sum_probs=137.2
Q ss_pred hHHHHHHHHHHh--CHHHHHHHHHhcCCCCCeEEEEcC--CCCCCHHHHHHHHhhcCCCCCceecccCCceEEeeCCccc
Q 009708 230 PVWMVRRWTKYL--GQEEAIKLMVWNNSDPSFSLRANS--RKGVTRADLVMQLNLLKLQVPHELSLHLDEFIRVKTGLQN 305 (528)
Q Consensus 230 P~w~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~rvn~--~k~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (528)
-.|..++|.+.+ +..+++.++......++.+++.+. ....+.+.+.+.+.......|.. ++-.. ..
T Consensus 20 ~~~~~~~l~~~~~~~~~~a~~ll~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~p~~---yi~g~-------~~ 89 (284)
T 1nv8_A 20 IRDCSGKLEGVTETSVLEVLLIVSRVLGIRKEDLFLKDLGVSPTEEKRILELVEKRASGYPLH---YILGE-------KE 89 (284)
T ss_dssp HHHHHHHTTTTCSCHHHHHHHHHHHHHTCCGGGGCCSSCCCCHHHHHHHHHHHHHHHTTCCHH---HHHTE-------EE
T ss_pred HHHHHHHHHhccCChHHHHHHHHHHHcCCCHHHHHhccccccccCHHHHHHHHHHHHCCCCCe---EEeee-------eE
Confidence 356777776655 455688888888777777777776 32122344444444322222211 10000 00
Q ss_pred hhcccc-cccceeEeecchHHHHHHhc---CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHH
Q 009708 306 VIQAGL-LKEGLCAVQDESAGLVVAVV---DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAK 381 (528)
Q Consensus 306 ~~~~~~-~~~G~~~~Qd~~s~l~~~~l---~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~ 381 (528)
...... +..|.++.+..+..++..++ ...++.+|||+|||+|..++.++.. +..+|+|+|+|+.+++.+++|++
T Consensus 90 f~~~~~~v~~~~lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~ 167 (284)
T 1nv8_A 90 FMGLSFLVEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAE 167 (284)
T ss_dssp ETTEEEECCTTSCCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHH
T ss_pred ECCeEEEeCCCceecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHH
Confidence 001111 12344444444444433332 2336679999999999999999987 46899999999999999999999
Q ss_pred HcCCCccEEEEcCccccccccCCCCC---CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHh-ccCcC
Q 009708 382 LHQVNSVIRTIHADLRTFADNSTVKC---DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAAS-LLVKP 457 (528)
Q Consensus 382 ~~g~~~~i~~~~~D~~~~~~~~~~~f---D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~-~~Lkp 457 (528)
.+|+.++++++++|+..... ++| |+|++||||.+.+. ...++++|.. ...+. .......+++.+. +.++|
T Consensus 168 ~~~l~~~v~~~~~D~~~~~~---~~f~~~D~IvsnPPyi~~~~-~l~~~v~~ep-~~al~-~~~dgl~~~~~i~~~~l~p 241 (284)
T 1nv8_A 168 RHGVSDRFFVRKGEFLEPFK---EKFASIEMILSNPPYVKSSA-HLPKDVLFEP-PEALF-GGEDGLDFYREFFGRYDTS 241 (284)
T ss_dssp HTTCTTSEEEEESSTTGGGG---GGTTTCCEEEECCCCBCGGG-SCTTSCCCSC-HHHHB-CTTTSCHHHHHHHHHCCCT
T ss_pred HcCCCCceEEEECcchhhcc---cccCCCCEEEEcCCCCCccc-ccChhhccCc-HHHhc-CCCcHHHHHHHHHHhcCCC
Confidence 99998779999999987543 368 99999999988776 4445544211 01000 0000114578888 99999
Q ss_pred CCEEEE
Q 009708 458 GGVLVY 463 (528)
Q Consensus 458 GG~Lvy 463 (528)
||.|++
T Consensus 242 gG~l~~ 247 (284)
T 1nv8_A 242 GKIVLM 247 (284)
T ss_dssp TCEEEE
T ss_pred CCEEEE
Confidence 999995
No 28
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.65 E-value=1.7e-14 Score=150.07 Aligned_cols=251 Identities=12% Similarity=0.146 Sum_probs=153.3
Q ss_pred HHHHHHHHHHhcC-CCchhhHHHHHHHHHhhcCCCCCCCCcCcCCcHHHHHHHHhhhcChHHHHHHHHHHhCHHHHHHHH
Q 009708 172 VDENVRLAKVALR-PGAGNLVNGILRKLVLLKDNNSLPLPKLEGNDRAQARALATIYSHPVWMVRRWTKYLGQEEAIKLM 250 (528)
Q Consensus 172 inEaV~lak~~~~-~~~~~fVN~VL~~~~r~~~~~~~~~~~~~~~~~~~~~~ls~~~s~P~w~~~~~~~~~g~~~~~~~~ 250 (528)
.|+.++.++.-.+ +...+++|+||+.+ +.. . ...+|+..+++|+|.+++|.+.++.. .++
T Consensus 25 ~~~~~~~~~~~~~l~~~~~~~~~ll~~L-~~~------~---------t~~eLa~~~g~~~~~v~~~L~~l~~~---gll 85 (373)
T 2qm3_A 25 MKEIVERVKTKTKIPVYERSVENVLSAV-LAS------D---------DIWRIVDLSEEPLPLVVAILESLNEL---GYV 85 (373)
T ss_dssp HHHHHHHHHTTCSSCCCHHHHHHHHHHH-HHC------S---------CHHHHHHHHTSCHHHHHHHHHHHHHT---TSE
T ss_pred HHHHHHHHHHhcCccHhHHHHHHHHHHh-cCC------C---------CHHHHHHHhCCChHHHHHHHHHHhhC---CcE
Confidence 4444444442211 23478999999999 421 1 13468889999999999999988632 222
Q ss_pred HhcCCCCCeEEEEcCCCCCCHHHHHHHHhhcCCCCCceec-ccCCc-eEEee-------------CCccchhcccccccc
Q 009708 251 VWNNSDPSFSLRANSRKGVTRADLVMQLNLLKLQVPHELS-LHLDE-FIRVK-------------TGLQNVIQAGLLKEG 315 (528)
Q Consensus 251 ~~~~~~~~~~~rvn~~k~~~~~~~~~~L~~~~~~~~~~~~-~~~~~-~~~~~-------------~~~~~~~~~~~~~~G 315 (528)
+..+ . +|.+.. .+.+... .+........ ..+.+ .+... .+.+ .....|.++
T Consensus 86 ~~~~---~--~~lt~~----~~~~l~~---~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~ 151 (373)
T 2qm3_A 86 TFED---G--VKLTEK----GEELVAE---YGIGKRYDFTCPHCQGKTVDLQAFADLLEQFREIVKDRP--EPLHEFDQA 151 (373)
T ss_dssp ECSS---S--SEECHH----HHHHHHH---HTCCCCCC------------CGGGHHHHHHHHHHHTTCC--CCCGGGTCC
T ss_pred EECC---C--EEECHH----HHHHHHh---cCccccccccchhhcCCCcchhhhHHHHHHHHHHHhcCC--ccchhcCCe
Confidence 2111 1 444321 1233322 2221100000 00000 00000 0000 011234555
Q ss_pred eeEeecchHHHHHHh-cCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcC
Q 009708 316 LCAVQDESAGLVVAV-VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA 394 (528)
Q Consensus 316 ~~~~Qd~~s~l~~~~-l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~ 394 (528)
+...|+..+.++... ....+|.+|||+| |+|..+..++.. ++.++|+++|+++.+++.+++|++++|+. +++++++
T Consensus 152 ~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~ 228 (373)
T 2qm3_A 152 YVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTF 228 (373)
T ss_dssp CBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECC
T ss_pred ecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEC
Confidence 666666665555332 2234688999999 999999999875 44479999999999999999999999987 5999999
Q ss_pred cccc-ccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCC-EEEEEcCC--CCc
Q 009708 395 DLRT-FADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGG-VLVYSTCS--IDP 470 (528)
Q Consensus 395 D~~~-~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG-~LvysTcs--~~~ 470 (528)
|+.. ++....++||+|++||||.. .. ...++..+.+.||||| .++|++|+ -.+
T Consensus 229 D~~~~l~~~~~~~fD~Vi~~~p~~~----------------~~-------~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~ 285 (373)
T 2qm3_A 229 DLRKPLPDYALHKFDTFITDPPETL----------------EA-------IRAFVGRGIATLKGPRCAGYFGITRRESSL 285 (373)
T ss_dssp CTTSCCCTTTSSCBSEEEECCCSSH----------------HH-------HHHHHHHHHHTBCSTTCEEEEEECTTTCCH
T ss_pred hhhhhchhhccCCccEEEECCCCch----------------HH-------HHHHHHHHHHHcccCCeEEEEEEecCcCCH
Confidence 9988 43222358999999999842 11 1567999999999999 55888876 222
Q ss_pred hhhHHHHHHHHh
Q 009708 471 EENEERVEAFLL 482 (528)
Q Consensus 471 ~Ene~~v~~~l~ 482 (528)
.+. ..+..++.
T Consensus 286 ~~~-~~~~~~l~ 296 (373)
T 2qm3_A 286 DKW-REIQKLLL 296 (373)
T ss_dssp HHH-HHHHHHHH
T ss_pred HHH-HHHHHHHH
Confidence 111 44566665
No 29
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.65 E-value=6.4e-16 Score=149.71 Aligned_cols=131 Identities=16% Similarity=0.227 Sum_probs=110.0
Q ss_pred ccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEE
Q 009708 313 KEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTI 392 (528)
Q Consensus 313 ~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~ 392 (528)
..|..++|...+.++..++...++.+|||+|||+|..+..+++.++ .++|+++|+++.+++.++++++..|+.++++++
T Consensus 32 ~~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~ 110 (233)
T 2gpy_A 32 EQQVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELL 110 (233)
T ss_dssp HTTCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HcCCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4566778888888888887777889999999999999999999864 589999999999999999999999997779999
Q ss_pred cCccccccccC--CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 393 HADLRTFADNS--TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 393 ~~D~~~~~~~~--~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
++|+....+.. .++||+|++|+++. .+..+++.+.++|+|||+|++.++.+.
T Consensus 111 ~~d~~~~~~~~~~~~~fD~I~~~~~~~-------------------------~~~~~l~~~~~~L~pgG~lv~~~~~~~ 164 (233)
T 2gpy_A 111 FGDALQLGEKLELYPLFDVLFIDAAKG-------------------------QYRRFFDMYSPMVRPGGLILSDNVLFR 164 (233)
T ss_dssp CSCGGGSHHHHTTSCCEEEEEEEGGGS-------------------------CHHHHHHHHGGGEEEEEEEEEETTTC-
T ss_pred ECCHHHHHHhcccCCCccEEEECCCHH-------------------------HHHHHHHHHHHHcCCCeEEEEEcCCcC
Confidence 99998753322 36899999998873 124568999999999999999876543
No 30
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.65 E-value=2.3e-16 Score=161.59 Aligned_cols=145 Identities=21% Similarity=0.251 Sum_probs=112.4
Q ss_pred cccccceeEeecchHHHHHHhcC-CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCc-
Q 009708 310 GLLKEGLCAVQDESAGLVVAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS- 387 (528)
Q Consensus 310 ~~~~~G~~~~Qd~~s~l~~~~l~-~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~- 387 (528)
..++.|+|..|......+...+. ..++.+|||+|||+|+.++.++.. +.+|+++|+|+.+++.+++|++.+|+++
T Consensus 127 ~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~~~ 203 (332)
T 2igt_A 127 AFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLEQA 203 (332)
T ss_dssp SSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCTTS
T ss_pred ccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcc
Confidence 44667888888887766766654 456789999999999999999984 3499999999999999999999999976
Q ss_pred cEEEEcCccccccccC---CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCE-EEE
Q 009708 388 VIRTIHADLRTFADNS---TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGV-LVY 463 (528)
Q Consensus 388 ~i~~~~~D~~~~~~~~---~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~-Lvy 463 (528)
+++++++|+.++.... ..+||+|++||||.+.+.- .+ .| .....+..++..+.++|||||+ ++.
T Consensus 204 ~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~---~~-~~--------~~~~~~~~ll~~~~~~LkpgG~lli~ 271 (332)
T 2igt_A 204 PIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTH---GE-VW--------QLFDHLPLMLDICREILSPKALGLVL 271 (332)
T ss_dssp CEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTT---CC-EE--------EHHHHHHHHHHHHHHTBCTTCCEEEE
T ss_pred ceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCch---HH-HH--------HHHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 4899999998865421 3689999999999654310 00 01 1233456789999999999998 556
Q ss_pred EcCCCC
Q 009708 464 STCSID 469 (528)
Q Consensus 464 sTcs~~ 469 (528)
++|+..
T Consensus 272 ~~~~~~ 277 (332)
T 2igt_A 272 TAYSIR 277 (332)
T ss_dssp EECCTT
T ss_pred ECCCCC
Confidence 667755
No 31
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.65 E-value=4.2e-16 Score=152.03 Aligned_cols=126 Identities=20% Similarity=0.166 Sum_probs=103.0
Q ss_pred eecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc
Q 009708 319 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 398 (528)
Q Consensus 319 ~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~ 398 (528)
++.....++..++...++.+|||+|||+|..++.+++.+++.++|+++|+++.+++.+++++++.|+.++++++++|+.+
T Consensus 54 ~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 133 (237)
T 3c3y_A 54 TSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAML 133 (237)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 44455556655555556779999999999999999998876789999999999999999999999998789999999987
Q ss_pred ccccC------CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 399 FADNS------TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 399 ~~~~~------~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
..+.. .++||+|++|+++. .+..+++.+.++|+|||+|++.+|.+.
T Consensus 134 ~l~~l~~~~~~~~~fD~I~~d~~~~-------------------------~~~~~l~~~~~~L~pGG~lv~d~~~~~ 185 (237)
T 3c3y_A 134 ALDNLLQGQESEGSYDFGFVDADKP-------------------------NYIKYHERLMKLVKVGGIVAYDNTLWG 185 (237)
T ss_dssp HHHHHHHSTTCTTCEEEEEECSCGG-------------------------GHHHHHHHHHHHEEEEEEEEEECTTGG
T ss_pred HHHHHHhccCCCCCcCEEEECCchH-------------------------HHHHHHHHHHHhcCCCeEEEEecCCcC
Confidence 54322 36899999997752 124568889999999999999987543
No 32
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.65 E-value=2e-17 Score=164.81 Aligned_cols=203 Identities=16% Similarity=0.218 Sum_probs=122.4
Q ss_pred HHHhcCCCCCeEEEEcCCCCCCHHHH-HHHHhhcCCCCCceecccCCceEEeeCCccchhcccccccceeEeecchHHHH
Q 009708 249 LMVWNNSDPSFSLRANSRKGVTRADL-VMQLNLLKLQVPHELSLHLDEFIRVKTGLQNVIQAGLLKEGLCAVQDESAGLV 327 (528)
Q Consensus 249 ~~~~~~~~~~~~~rvn~~k~~~~~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~~s~l~ 327 (528)
++.+.++.++++.|+|+.+ .+.+++ .+.|...+++. ... .....+....... ......+..+...+++..+.++
T Consensus 28 i~~~~~~~~~~~~r~~~~~-~~~~~~~~~~l~g~~~g~--~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 102 (275)
T 1yb2_A 28 ILVSEDEYGKFDESTNSIL-VKGKMHHLGISRVIEPGD--ELI-VSGKSFIVSDFSP-MYFGRVIRRNTQIISEIDASYI 102 (275)
T ss_dssp EEECSSCCEEEETTTTEEE-C-CCEEECC-CCCCCTTC--EEE-ETTEEEEEECCCG-GGHHHHC---------------
T ss_pred EEEecCCCCceecccccee-ccCCccchhheeCCCCCc--EEE-ECCeEEEEeCCCH-HHHHhhccccccccChhhHHHH
Confidence 4456788888898888553 122111 12222222211 111 1222222111111 1122345566777778788888
Q ss_pred HHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc-CCCccEEEEcCccccccccCCCC
Q 009708 328 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHADLRTFADNSTVK 406 (528)
Q Consensus 328 ~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~-g~~~~i~~~~~D~~~~~~~~~~~ 406 (528)
...+++.++.+|||+|||+|..+..+++.+.+.++|+++|+++.+++.+++|++.+ |.++ ++++++|+.+... .++
T Consensus 103 ~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~-v~~~~~d~~~~~~--~~~ 179 (275)
T 1yb2_A 103 IMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGN-VRTSRSDIADFIS--DQM 179 (275)
T ss_dssp ---CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTT-EEEECSCTTTCCC--SCC
T ss_pred HHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCc-EEEEECchhccCc--CCC
Confidence 88889999999999999999999999987666789999999999999999999998 8664 8999999987332 367
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCC
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPE 486 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~ 486 (528)
||+|++|+|.. ..+++.+.++|||||+|++++|+... .+.+...+.+. +
T Consensus 180 fD~Vi~~~~~~---------------------------~~~l~~~~~~LkpgG~l~i~~~~~~~---~~~~~~~l~~~-G 228 (275)
T 1yb2_A 180 YDAVIADIPDP---------------------------WNHVQKIASMMKPGSVATFYLPNFDQ---SEKTVLSLSAS-G 228 (275)
T ss_dssp EEEEEECCSCG---------------------------GGSHHHHHHTEEEEEEEEEEESSHHH---HHHHHHHSGGG-T
T ss_pred ccEEEEcCcCH---------------------------HHHHHHHHHHcCCCCEEEEEeCCHHH---HHHHHHHHHHC-C
Confidence 99999987741 13588999999999999999886532 22333445443 4
Q ss_pred ceEe
Q 009708 487 FSID 490 (528)
Q Consensus 487 ~~~~ 490 (528)
|...
T Consensus 229 f~~~ 232 (275)
T 1yb2_A 229 MHHL 232 (275)
T ss_dssp EEEE
T ss_pred CeEE
Confidence 5443
No 33
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.63 E-value=6.3e-15 Score=152.17 Aligned_cols=146 Identities=28% Similarity=0.355 Sum_probs=115.4
Q ss_pred cchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc
Q 009708 321 DESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA 400 (528)
Q Consensus 321 d~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~ 400 (528)
..-+..+..++...++.+|||+|||+|.+++.++...++..+|+|+|+++.+++.+++|++.+|++ .++++++|+.++.
T Consensus 189 ~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~ 267 (354)
T 3tma_A 189 PVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLP 267 (354)
T ss_dssp HHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGG
T ss_pred HHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCc
Confidence 334555666777888999999999999999999987534679999999999999999999999998 5999999999876
Q ss_pred ccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHH
Q 009708 401 DNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAF 480 (528)
Q Consensus 401 ~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~ 480 (528)
... ..||+|++||||.- .......+..++..+++.+.++|||||++++.||. ++.+..+
T Consensus 268 ~~~-~~~D~Ii~npPyg~--------------r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~------~~~~~~~ 326 (354)
T 3tma_A 268 RFF-PEVDRILANPPHGL--------------RLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR------PALLKRA 326 (354)
T ss_dssp GTC-CCCSEEEECCCSCC------------------CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC------HHHHHHH
T ss_pred ccc-CCCCEEEECCCCcC--------------ccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC------HHHHHHH
Confidence 432 46899999999931 01122445667889999999999999999999883 4455555
Q ss_pred HhhCCCceEe
Q 009708 481 LLRHPEFSID 490 (528)
Q Consensus 481 l~~~~~~~~~ 490 (528)
++ .+++..
T Consensus 327 ~~--~g~~~~ 334 (354)
T 3tma_A 327 LP--PGFALR 334 (354)
T ss_dssp CC--TTEEEE
T ss_pred hh--cCcEEE
Confidence 55 556553
No 34
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.63 E-value=1.6e-15 Score=146.45 Aligned_cols=137 Identities=15% Similarity=0.168 Sum_probs=107.0
Q ss_pred hcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCC-ccEEEEcCccccccccC-CCCC
Q 009708 330 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN-SVIRTIHADLRTFADNS-TVKC 407 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~-~~i~~~~~D~~~~~~~~-~~~f 407 (528)
...++++.+|||+|||+|..++.+++.++++++|+++|+++.+++.++++++..|+. ++++++++|+.++.+.. .++|
T Consensus 51 ~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~f 130 (221)
T 3dr5_A 51 TTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSY 130 (221)
T ss_dssp HSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCE
T ss_pred hhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCc
Confidence 334445569999999999999999998776789999999999999999999999998 67999999998876544 5789
Q ss_pred CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC-----chhhH------HH
Q 009708 408 DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID-----PEENE------ER 476 (528)
Q Consensus 408 D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~-----~~Ene------~~ 476 (528)
|+|++|++... +..+++.+.++|||||+|++.++.+. +..++ ..
T Consensus 131 D~V~~d~~~~~-------------------------~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~ 185 (221)
T 3dr5_A 131 QLVFGQVSPMD-------------------------LKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARD 185 (221)
T ss_dssp EEEEECCCTTT-------------------------HHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHH
T ss_pred CeEEEcCcHHH-------------------------HHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHH
Confidence 99999976521 13368889999999999998877652 22111 22
Q ss_pred HHHHHhhCCCceEec
Q 009708 477 VEAFLLRHPEFSIDP 491 (528)
Q Consensus 477 v~~~l~~~~~~~~~~ 491 (528)
+..++...++++..-
T Consensus 186 ~~~~l~~~~~~~~~~ 200 (221)
T 3dr5_A 186 ADEYIRSIEGAHVAR 200 (221)
T ss_dssp HHHHHTTCTTEEEEE
T ss_pred HHHHHhhCCCeeEEE
Confidence 445566677776543
No 35
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.62 E-value=2.3e-15 Score=147.59 Aligned_cols=142 Identities=25% Similarity=0.353 Sum_probs=110.9
Q ss_pred cccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEE
Q 009708 312 LKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRT 391 (528)
Q Consensus 312 ~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~ 391 (528)
+..+...+....+..+...+++.++.+|||+|||+|..+..++..+++.++|+++|+++.+++.+++|++.+|+.+++++
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~ 149 (255)
T 3mb5_A 70 MKRGPQIVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTI 149 (255)
T ss_dssp SCCCSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEE
T ss_pred CccccccccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEE
Confidence 33443344445566777788889999999999999999999999877678999999999999999999999999887999
Q ss_pred EcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCch
Q 009708 392 IHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPE 471 (528)
Q Consensus 392 ~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~ 471 (528)
+++|+.+... ..+||.|++|+|+. ..+++++.++|+|||++++.+.+ .
T Consensus 150 ~~~d~~~~~~--~~~~D~v~~~~~~~---------------------------~~~l~~~~~~L~~gG~l~~~~~~---~ 197 (255)
T 3mb5_A 150 KLKDIYEGIE--EENVDHVILDLPQP---------------------------ERVVEHAAKALKPGGFFVAYTPC---S 197 (255)
T ss_dssp ECSCGGGCCC--CCSEEEEEECSSCG---------------------------GGGHHHHHHHEEEEEEEEEEESS---H
T ss_pred EECchhhccC--CCCcCEEEECCCCH---------------------------HHHHHHHHHHcCCCCEEEEEECC---H
Confidence 9999986532 36799999998862 13588899999999999865422 2
Q ss_pred hhHHHHHHHHhhCC
Q 009708 472 ENEERVEAFLLRHP 485 (528)
Q Consensus 472 Ene~~v~~~l~~~~ 485 (528)
+....+...+.++.
T Consensus 198 ~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 198 NQVMRLHEKLREFK 211 (255)
T ss_dssp HHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHcC
Confidence 23334455666553
No 36
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.61 E-value=1.7e-15 Score=148.71 Aligned_cols=126 Identities=18% Similarity=0.165 Sum_probs=101.6
Q ss_pred eEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcc
Q 009708 317 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 396 (528)
Q Consensus 317 ~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~ 396 (528)
..++.....++..++...++.+|||+|||+|..++.++..++++++|+++|+++.+++.+++++++.|+.++++++++|+
T Consensus 61 ~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda 140 (247)
T 1sui_A 61 MTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA 140 (247)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH
Confidence 33455556666665555567899999999999999999987657899999999999999999999999977799999999
Q ss_pred ccccccC------CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 397 RTFADNS------TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 397 ~~~~~~~------~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
.+..+.. .++||+|++|+++.. +..+++.+.++|||||+|++.++.
T Consensus 141 ~~~l~~l~~~~~~~~~fD~V~~d~~~~~-------------------------~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 141 LPVLDEMIKDEKNHGSYDFIFVDADKDN-------------------------YLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp HHHHHHHHHSGGGTTCBSEEEECSCSTT-------------------------HHHHHHHHHHHBCTTCCEEEECTT
T ss_pred HHHHHHHHhccCCCCCEEEEEEcCchHH-------------------------HHHHHHHHHHhCCCCeEEEEecCC
Confidence 8754321 368999999976511 234688899999999999987643
No 37
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.61 E-value=4.7e-15 Score=143.92 Aligned_cols=129 Identities=14% Similarity=0.172 Sum_probs=105.3
Q ss_pred cceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc
Q 009708 314 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH 393 (528)
Q Consensus 314 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~ 393 (528)
.+...++.....++..++...++.+|||+|||+|..+..++... +.++|+++|+++.+++.++++++..|+.+++++++
T Consensus 50 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~ 128 (232)
T 3ntv_A 50 NEVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIE 128 (232)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred cCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 34445566666777777666678899999999999999999853 46899999999999999999999999986799999
Q ss_pred Cccccccc-cCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 394 ADLRTFAD-NSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 394 ~D~~~~~~-~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
+|+.+..+ ...++||+|++|+++.. +..+++.+.++|||||+|++..+.+
T Consensus 129 ~d~~~~~~~~~~~~fD~V~~~~~~~~-------------------------~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 129 GNALEQFENVNDKVYDMIFIDAAKAQ-------------------------SKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp SCGGGCHHHHTTSCEEEEEEETTSSS-------------------------HHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred CCHHHHHHhhccCCccEEEEcCcHHH-------------------------HHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 99988655 33578999999977631 2346899999999999999865543
No 38
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.61 E-value=1.7e-16 Score=165.20 Aligned_cols=162 Identities=17% Similarity=0.101 Sum_probs=114.9
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc---------------CCCccEEEEcCccccc
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH---------------QVNSVIRTIHADLRTF 399 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~---------------g~~~~i~~~~~D~~~~ 399 (528)
++.+|||+|||+|.+++.++..++ ..+|+++|+++.+++.+++|++.+ |+++ ++++++|+..+
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~-i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT-IVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE-EEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc-eEEEcCcHHHH
Confidence 688999999999999999999864 468999999999999999999999 8876 99999999887
Q ss_pred cccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHH
Q 009708 400 ADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEA 479 (528)
Q Consensus 400 ~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~ 479 (528)
.......||+|++||||+. ..+++.+.+.||+|| ++|.||+-...........
T Consensus 125 ~~~~~~~fD~I~lDP~~~~--------------------------~~~l~~a~~~lk~gG-~l~vt~td~~~l~~~~~~~ 177 (378)
T 2dul_A 125 MAERHRYFHFIDLDPFGSP--------------------------MEFLDTALRSAKRRG-ILGVTATDGAPLCGAHPRA 177 (378)
T ss_dssp HHHSTTCEEEEEECCSSCC--------------------------HHHHHHHHHHEEEEE-EEEEEECCHHHHTTSSHHH
T ss_pred HHhccCCCCEEEeCCCCCH--------------------------HHHHHHHHHhcCCCC-EEEEEeecchhhccccHHH
Confidence 6543457999999999852 246899999999999 6788997444222222333
Q ss_pred HHhhCCCceEecCCCCCCCc----------cccCCceEEEcCCCCCCCceEEEEEEec
Q 009708 480 FLLRHPEFSIDPADGLVPSD----------FVTKHGFFFSDPIKHSLDGAFAARLVRA 527 (528)
Q Consensus 480 ~l~~~~~~~~~~~~~~~~~~----------~~~~~g~~~~~P~~~~~dGff~a~l~k~ 527 (528)
.+.++..+ ........... .....| +.+.|.....+|||++++.|.
T Consensus 178 ~~~~yg~~-p~~~~~~~e~~~ri~l~~~~~~~~~~g-~~i~P~~~~~~~~y~rv~vrv 233 (378)
T 2dul_A 178 CLRKYLAV-PLRGELCHEVGTRILVGVIARYAAKYD-LGIDVILAYYKDHYFRAFVKL 233 (378)
T ss_dssp HHHHHSSB-CCCSTTHHHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETTEEEEEEEE
T ss_pred HHHHccCC-CcccccccchhHHHHHHHHHHhcCcCC-cEEEEEEEEecCCEEEEEEEE
Confidence 44443211 11100000000 011233 466776666689999999874
No 39
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.60 E-value=7e-15 Score=140.01 Aligned_cols=138 Identities=15% Similarity=0.208 Sum_probs=108.8
Q ss_pred ecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccc
Q 009708 320 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 399 (528)
Q Consensus 320 Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~ 399 (528)
+.....++...+.+.++++|||+|||+|..+..+++. .++|+|+|+++.+++.+++|++.+|++++++++++|+.+.
T Consensus 40 ~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 40 KSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA 116 (204)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG
T ss_pred cHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh
Confidence 3444456667778889999999999999999999986 5799999999999999999999999985599999999884
Q ss_pred cccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHH
Q 009708 400 ADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEA 479 (528)
Q Consensus 400 ~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~ 479 (528)
.... ..||.|++++.. . +. +++.+.++|||||+|++++|+. ++...+..
T Consensus 117 ~~~~-~~~D~v~~~~~~--------~------------------~~-~l~~~~~~LkpgG~lv~~~~~~---~~~~~~~~ 165 (204)
T 3njr_A 117 LADL-PLPEAVFIGGGG--------S------------------QA-LYDRLWEWLAPGTRIVANAVTL---ESETLLTQ 165 (204)
T ss_dssp GTTS-CCCSEEEECSCC--------C------------------HH-HHHHHHHHSCTTCEEEEEECSH---HHHHHHHH
T ss_pred cccC-CCCCEEEECCcc--------c------------------HH-HHHHHHHhcCCCcEEEEEecCc---ccHHHHHH
Confidence 4322 579999987521 0 12 5889999999999999988764 45555666
Q ss_pred HHhhCCCceEecC
Q 009708 480 FLLRHPEFSIDPA 492 (528)
Q Consensus 480 ~l~~~~~~~~~~~ 492 (528)
+++++. +++..+
T Consensus 166 ~l~~~g-~~i~~i 177 (204)
T 3njr_A 166 LHARHG-GQLLRI 177 (204)
T ss_dssp HHHHHC-SEEEEE
T ss_pred HHHhCC-CcEEEE
Confidence 777654 555443
No 40
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.60 E-value=2.4e-15 Score=150.21 Aligned_cols=135 Identities=21% Similarity=0.297 Sum_probs=106.7
Q ss_pred chHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc
Q 009708 322 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 401 (528)
Q Consensus 322 ~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~ 401 (528)
.....+... .++|++|||+|||+|+.++.++... ..+|+|+|+|+.+++.+++|++.+|+.++++++++|+.++..
T Consensus 114 ~~~~~l~~~--~~~~~~VLDlgcG~G~~~~~la~~~--~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~ 189 (278)
T 2frn_A 114 KERVRMAKV--AKPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG 189 (278)
T ss_dssp HHHHHHHHH--CCTTCEEEETTCTTTTTHHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC
T ss_pred HHHHHHHHh--CCCCCEEEEecccCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc
Confidence 444445554 3578999999999999999999872 238999999999999999999999998889999999998765
Q ss_pred cCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC---chhhHHHHH
Q 009708 402 NSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID---PEENEERVE 478 (528)
Q Consensus 402 ~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~---~~Ene~~v~ 478 (528)
..+||+|++|||++. ..++..+.++|||||+|++++|+.. ..+..+.+.
T Consensus 190 --~~~fD~Vi~~~p~~~--------------------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~ 241 (278)
T 2frn_A 190 --ENIADRILMGYVVRT--------------------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFK 241 (278)
T ss_dssp --CSCEEEEEECCCSSG--------------------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHH
T ss_pred --cCCccEEEECCchhH--------------------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHH
Confidence 478999999999742 2348889999999999999999842 234445556
Q ss_pred HHHhhCCCceE
Q 009708 479 AFLLRHPEFSI 489 (528)
Q Consensus 479 ~~l~~~~~~~~ 489 (528)
..+.+. ++.+
T Consensus 242 ~~~~~~-G~~~ 251 (278)
T 2frn_A 242 RITKEY-GYDV 251 (278)
T ss_dssp HHHHHT-TCEE
T ss_pred HHHHHc-CCee
Confidence 666654 3444
No 41
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.60 E-value=2.4e-15 Score=143.28 Aligned_cols=126 Identities=13% Similarity=0.109 Sum_probs=100.3
Q ss_pred EeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccc
Q 009708 318 AVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR 397 (528)
Q Consensus 318 ~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~ 397 (528)
.++.....++..++...++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++..|+.++++++++|+.
T Consensus 39 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 118 (210)
T 3c3p_A 39 IVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPL 118 (210)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHH
Confidence 34444555555444444577999999999999999998765468999999999999999999999998877999999998
Q ss_pred cccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 398 TFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 398 ~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
+..+...+ ||+|++|+++.. +..+++.+.++|||||+|++.++.+.
T Consensus 119 ~~~~~~~~-fD~v~~~~~~~~-------------------------~~~~l~~~~~~LkpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 119 GIAAGQRD-IDILFMDCDVFN-------------------------GADVLERMNRCLAKNALLIAVNALRR 164 (210)
T ss_dssp HHHTTCCS-EEEEEEETTTSC-------------------------HHHHHHHHGGGEEEEEEEEEESSSSC
T ss_pred HHhccCCC-CCEEEEcCChhh-------------------------hHHHHHHHHHhcCCCeEEEEECcccc
Confidence 76443345 999999965421 23468999999999999999876543
No 42
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.60 E-value=5.2e-15 Score=137.72 Aligned_cols=136 Identities=12% Similarity=0.080 Sum_probs=97.4
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
+.+|++|||+|||+|..+..+++. .++|+|+|+|+.+++.++++++.+|++ +++++++|...+.....++||.|++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIE-NTELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCC-CEEEEESCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCcHHHHHhhccCCcCEEEE
Confidence 467899999999999999999976 589999999999999999999999985 4899998887754433578999999
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCch--hhHHHHHHHHhhCC
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPE--ENEERVEAFLLRHP 485 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~--Ene~~v~~~l~~~~ 485 (528)
++++-..+ ...+......+..+++.+.++|||||+++++.++.++. +..+.+..++...+
T Consensus 96 ~~~~~~~~-------------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~ 157 (185)
T 3mti_A 96 NLGYLPSA-------------DKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLD 157 (185)
T ss_dssp EEC------------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSC
T ss_pred eCCCCCCc-------------chhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCC
Confidence 86552110 01122223345567999999999999999888775543 22234556666543
No 43
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.60 E-value=2.5e-15 Score=144.33 Aligned_cols=126 Identities=15% Similarity=0.198 Sum_probs=102.4
Q ss_pred EeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccc
Q 009708 318 AVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR 397 (528)
Q Consensus 318 ~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~ 397 (528)
.++...+.++..++...++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++..|+.++++++++|+.
T Consensus 47 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 126 (225)
T 3tr6_A 47 QTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAK 126 (225)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred ccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHH
Confidence 34455566666666656788999999999999999998876578999999999999999999999999888999999997
Q ss_pred cccccCC-----CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 398 TFADNST-----VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 398 ~~~~~~~-----~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
+..+... ++||+|++|++.. . +..+++.+.++|||||+|++.++.+
T Consensus 127 ~~~~~~~~~~~~~~fD~v~~~~~~~------------------~-------~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 127 DTLAELIHAGQAWQYDLIYIDADKA------------------N-------TDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp HHHHHHHTTTCTTCEEEEEECSCGG------------------G-------HHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHHHhhhccCCCCccEEEECCCHH------------------H-------HHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 7543221 6899999998741 1 2346889999999999999877654
No 44
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=6.2e-15 Score=145.75 Aligned_cols=153 Identities=17% Similarity=0.182 Sum_probs=106.3
Q ss_pred hHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHH---cCCCccEEEEcCccccc
Q 009708 323 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL---HQVNSVIRTIHADLRTF 399 (528)
Q Consensus 323 ~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~---~g~~~~i~~~~~D~~~~ 399 (528)
.+.+++.++...++.+|||+|||+|..++.++++.+ ..+|+++|+++.+++.+++|++. +++.++++++++|+.++
T Consensus 24 D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 24 DAMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR 102 (260)
T ss_dssp HHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC
T ss_pred HHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH
Confidence 467778888888889999999999999999999853 57999999999999999999999 88887799999999887
Q ss_pred cc------cCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhh
Q 009708 400 AD------NSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEEN 473 (528)
Q Consensus 400 ~~------~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~En 473 (528)
.. ....+||+|++|||+...+ -...++..... ...........+++.+.++|||||+|++.. +.+.
T Consensus 103 ~~~~~~~~~~~~~fD~Vv~nPPy~~~~-~~~~~~~~~~~---a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~----~~~~ 174 (260)
T 2ozv_A 103 AKARVEAGLPDEHFHHVIMNPPYNDAG-DRRTPDALKAE---AHAMTEGLFEDWIRTASAIMVSGGQLSLIS----RPQS 174 (260)
T ss_dssp HHHHHHTTCCTTCEEEEEECCCC-------------------------CCHHHHHHHHHHHEEEEEEEEEEE----CGGG
T ss_pred hhhhhhhccCCCCcCEEEECCCCcCCC-CCCCcCHHHHH---HhhcCcCCHHHHHHHHHHHcCCCCEEEEEE----cHHH
Confidence 32 1246899999999996553 11222221110 000111124567999999999999998643 2233
Q ss_pred HHHHHHHHhhC
Q 009708 474 EERVEAFLLRH 484 (528)
Q Consensus 474 e~~v~~~l~~~ 484 (528)
...+...+.++
T Consensus 175 ~~~~~~~l~~~ 185 (260)
T 2ozv_A 175 VAEIIAACGSR 185 (260)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHhc
Confidence 33344555543
No 45
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.59 E-value=5.1e-15 Score=139.23 Aligned_cols=141 Identities=18% Similarity=0.217 Sum_probs=106.8
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEE
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 411 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl 411 (528)
.+.++.+|||+|||+|..+..+++.+++.++|+|+|+++.+++.++++++.+|+.++++++++|+..+.....++||+|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 35678899999999999999999987666799999999999999999999999866699999999887644457899999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCch--hhHHHHHHHHhhCC
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPE--ENEERVEAFLLRHP 485 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~--Ene~~v~~~l~~~~ 485 (528)
+|+|+...+. ........ .+.++++.+.++|||||++++++++-++. +..+.+..++...+
T Consensus 99 ~~~~~~~~~~------~~~~~~~~-------~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 161 (197)
T 3eey_A 99 FNLGYLPSGD------HSISTRPE-------TTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVD 161 (197)
T ss_dssp EEESBCTTSC------TTCBCCHH-------HHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSC
T ss_pred EcCCcccCcc------cccccCcc-------cHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCC
Confidence 9987721110 00111111 23447999999999999999887654432 23345667776543
No 46
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.59 E-value=2.4e-14 Score=135.60 Aligned_cols=139 Identities=17% Similarity=0.242 Sum_probs=110.3
Q ss_pred cceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc
Q 009708 314 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH 393 (528)
Q Consensus 314 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~ 393 (528)
+|.+ .++.....+...+.+.++.+|||+|||+|..+..++.. .+.++|+++|+|+.+++.+++|++.+|++ ++++++
T Consensus 20 ~g~~-~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~ 96 (204)
T 3e05_A 20 KKLI-TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNL-MPNGRIFALERNPQYLGFIRDNLKKFVAR-NVTLVE 96 (204)
T ss_dssp TTTS-CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHH-CTTSEEEEEECCHHHHHHHHHHHHHHTCT-TEEEEE
T ss_pred CCcC-ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEe
Confidence 3666 55555566677788889999999999999999999987 34689999999999999999999999986 499999
Q ss_pred CccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhh
Q 009708 394 ADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEEN 473 (528)
Q Consensus 394 ~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~En 473 (528)
+|+.+..... ..||+|+++.+.. + ...+++.+.++|||||++++++++. ++
T Consensus 97 ~d~~~~~~~~-~~~D~i~~~~~~~------------------~-------~~~~l~~~~~~LkpgG~l~~~~~~~---~~ 147 (204)
T 3e05_A 97 AFAPEGLDDL-PDPDRVFIGGSGG------------------M-------LEEIIDAVDRRLKSEGVIVLNAVTL---DT 147 (204)
T ss_dssp CCTTTTCTTS-CCCSEEEESCCTT------------------C-------HHHHHHHHHHHCCTTCEEEEEECBH---HH
T ss_pred CChhhhhhcC-CCCCEEEECCCCc------------------C-------HHHHHHHHHHhcCCCeEEEEEeccc---cc
Confidence 9997654332 5799999987652 1 1356999999999999999877653 34
Q ss_pred HHHHHHHHhhC
Q 009708 474 EERVEAFLLRH 484 (528)
Q Consensus 474 e~~v~~~l~~~ 484 (528)
.+.+..++.++
T Consensus 148 ~~~~~~~l~~~ 158 (204)
T 3e05_A 148 LTKAVEFLEDH 158 (204)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHC
Confidence 44556666665
No 47
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.58 E-value=1.1e-14 Score=140.03 Aligned_cols=127 Identities=16% Similarity=0.147 Sum_probs=99.8
Q ss_pred Eeecch-HHHHHHhcC--CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCC----CccEE
Q 009708 318 AVQDES-AGLVVAVVD--PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV----NSVIR 390 (528)
Q Consensus 318 ~~Qd~~-s~l~~~~l~--~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~----~~~i~ 390 (528)
.++++. ...+...+. +.++.+|||+|||+|.++..+++.+++.++|+++|+++.+++.++++++.+|. .++++
T Consensus 57 ~~~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~ 136 (226)
T 1i1n_A 57 TISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQ 136 (226)
T ss_dssp EECCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEE
T ss_pred eecCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEE
Confidence 344443 234444554 77899999999999999999999876567999999999999999999998774 23489
Q ss_pred EEcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCc
Q 009708 391 TIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDP 470 (528)
Q Consensus 391 ~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~ 470 (528)
++++|+...... ...||+|+++.+|.. +++.+.++|||||+|++++|+...
T Consensus 137 ~~~~d~~~~~~~-~~~fD~i~~~~~~~~----------------------------~~~~~~~~LkpgG~lv~~~~~~~~ 187 (226)
T 1i1n_A 137 LVVGDGRMGYAE-EAPYDAIHVGAAAPV----------------------------VPQALIDQLKPGGRLILPVGPAGG 187 (226)
T ss_dssp EEESCGGGCCGG-GCCEEEEEECSBBSS----------------------------CCHHHHHTEEEEEEEEEEESCTTS
T ss_pred EEECCcccCccc-CCCcCEEEECCchHH----------------------------HHHHHHHhcCCCcEEEEEEecCCC
Confidence 999998764322 357999999988821 256778999999999999998766
Q ss_pred hhh
Q 009708 471 EEN 473 (528)
Q Consensus 471 ~En 473 (528)
+++
T Consensus 188 ~~~ 190 (226)
T 1i1n_A 188 NQM 190 (226)
T ss_dssp CEE
T ss_pred ceE
Confidence 554
No 48
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.57 E-value=2.7e-14 Score=142.13 Aligned_cols=136 Identities=15% Similarity=0.190 Sum_probs=107.2
Q ss_pred hHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc
Q 009708 323 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 402 (528)
Q Consensus 323 ~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~ 402 (528)
.+..+...+++.++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++|++.+|+.++++++++|+.+...
T Consensus 100 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 178 (277)
T 1o54_A 100 DSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD- 178 (277)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS-
T ss_pred HHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc-
Confidence 3446667778889999999999999999999998666789999999999999999999999986569999999987632
Q ss_pred CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHh
Q 009708 403 STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLL 482 (528)
Q Consensus 403 ~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~ 482 (528)
.+.||+|++|+|+. ..+++.+.++|+|||+|++.+++.. ....+...+.
T Consensus 179 -~~~~D~V~~~~~~~---------------------------~~~l~~~~~~L~pgG~l~~~~~~~~---~~~~~~~~l~ 227 (277)
T 1o54_A 179 -EKDVDALFLDVPDP---------------------------WNYIDKCWEALKGGGRFATVCPTTN---QVQETLKKLQ 227 (277)
T ss_dssp -CCSEEEEEECCSCG---------------------------GGTHHHHHHHEEEEEEEEEEESSHH---HHHHHHHHHH
T ss_pred -CCccCEEEECCcCH---------------------------HHHHHHHHHHcCCCCEEEEEeCCHH---HHHHHHHHHH
Confidence 35799999998862 1358888999999999998876532 2223344555
Q ss_pred hCCCceEec
Q 009708 483 RHPEFSIDP 491 (528)
Q Consensus 483 ~~~~~~~~~ 491 (528)
+ .+|....
T Consensus 228 ~-~gf~~~~ 235 (277)
T 1o54_A 228 E-LPFIRIE 235 (277)
T ss_dssp H-SSEEEEE
T ss_pred H-CCCceeE
Confidence 5 4565443
No 49
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.57 E-value=6.8e-15 Score=146.55 Aligned_cols=122 Identities=23% Similarity=0.332 Sum_probs=97.9
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
.++|++|||+|||+|.+++.+|.. +..+|+|+|+|+.+++.+++|++.+|+.++++++++|++++... ..||.|++
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~--~~~D~Vi~ 198 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGE--NIADRILM 198 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCC--SCEEEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccc--cCCCEEEE
Confidence 467999999999999999999986 35689999999999999999999999999999999999987653 68999999
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC---CCchhhHHHHHHHHhhC
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS---IDPEENEERVEAFLLRH 484 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs---~~~~Ene~~v~~~l~~~ 484 (528)
|+|+++. ++|..|.++||+||+|.|.+.. ....+..+.+..+....
T Consensus 199 ~~p~~~~--------------------------~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~ 247 (278)
T 3k6r_A 199 GYVVRTH--------------------------EFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp CCCSSGG--------------------------GGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHT
T ss_pred CCCCcHH--------------------------HHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHc
Confidence 9998541 2478889999999998754321 12223344555655544
No 50
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.55 E-value=6.7e-15 Score=153.44 Aligned_cols=110 Identities=20% Similarity=0.189 Sum_probs=93.9
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCcc-EEEEcCccccccc-cCCCCCCEEE
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSV-IRTIHADLRTFAD-NSTVKCDKVL 411 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~-i~~~~~D~~~~~~-~~~~~fD~Vl 411 (528)
++|.+|||+|||+|++++.+|..+.+.++|+++|+++.+++.+++|++.+|++++ ++++++|+..+.. ....+||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 5688999999999999999999765457999999999999999999999999877 9999999988765 4456799999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCc
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDP 470 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~ 470 (528)
+||+++. ..+++.+.++|++|| ++|+||+-..
T Consensus 131 lDP~g~~--------------------------~~~l~~a~~~Lk~gG-ll~~t~t~~~ 162 (392)
T 3axs_A 131 LDPFGTP--------------------------VPFIESVALSMKRGG-ILSLTATDTA 162 (392)
T ss_dssp ECCSSCC--------------------------HHHHHHHHHHEEEEE-EEEEEECCHH
T ss_pred ECCCcCH--------------------------HHHHHHHHHHhCCCC-EEEEEecchh
Confidence 9997531 236888999999999 7788897544
No 51
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.55 E-value=2e-14 Score=138.48 Aligned_cols=148 Identities=10% Similarity=0.065 Sum_probs=101.4
Q ss_pred CCCCCeEEEeCCc-cchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEE
Q 009708 333 PQPGQSIVDCCAA-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 411 (528)
Q Consensus 333 ~~~g~~VLDl~aG-~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl 411 (528)
+.++.+|||+||| +|..++.++... ..+|+|+|+++.+++.+++|++.+|+ +++++++|+..+.....++||+|+
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~ 128 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIF 128 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEE
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEE
Confidence 5678999999999 999999999874 57999999999999999999999998 389999997544333347899999
Q ss_pred EcCCCCCCccccCC-chhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCCceEe
Q 009708 412 LDAPCSGLGVLSKR-ADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPEFSID 490 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~-pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~ 490 (528)
+|||+...+.-... |...|...... ......+++.+.++|||||++++.+++. .+..+.+...+.++ +|.+.
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~--~~~~~~~~~~l~~~-g~~~~ 201 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYG----EEFSVKLLEEAFDHLNPGGKVALYLPDK--EKLLNVIKERGIKL-GYSVK 201 (230)
T ss_dssp ECCCCC---------------CCSSS----CHHHHHHHHHHGGGEEEEEEEEEEEESC--HHHHHHHHHHHHHT-TCEEE
T ss_pred ECCCCcCCccccccChhhhhccCccc----hHHHHHHHHHHHHHhCCCeEEEEEeccc--HhHHHHHHHHHHHc-CCceE
Confidence 99999654331111 11011000001 1223568999999999999999865432 23334455666665 45554
Q ss_pred c
Q 009708 491 P 491 (528)
Q Consensus 491 ~ 491 (528)
.
T Consensus 202 ~ 202 (230)
T 3evz_A 202 D 202 (230)
T ss_dssp E
T ss_pred E
Confidence 4
No 52
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.54 E-value=2.7e-14 Score=148.33 Aligned_cols=149 Identities=15% Similarity=0.281 Sum_probs=106.0
Q ss_pred HHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC-C-
Q 009708 327 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-T- 404 (528)
Q Consensus 327 ~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~-~- 404 (528)
+.+.+... +++|||+|||+|.+++.+|.. ..+|+|+|+++.+++.+++|++.+|+++ ++++++|+.++.... .
T Consensus 206 ~~~~~~~~-~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~-v~~~~~d~~~~~~~~~~~ 280 (369)
T 3bt7_A 206 ALDVTKGS-KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDN-VQIIRMAAEEFTQAMNGV 280 (369)
T ss_dssp HHHHTTTC-CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCS-EEEECCCSHHHHHHHSSC
T ss_pred HHHHhhcC-CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEECCHHHHHHHHhhc
Confidence 34445444 578999999999999998864 4699999999999999999999999975 999999998764321 1
Q ss_pred -------------CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCch
Q 009708 405 -------------VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPE 471 (528)
Q Consensus 405 -------------~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~ 471 (528)
..||+|++|||+.| . ...+.+.|+++|+|||++|+...-
T Consensus 281 ~~~~~l~~~~~~~~~fD~Vv~dPPr~g--~--------------------------~~~~~~~l~~~g~ivyvsc~p~t~ 332 (369)
T 3bt7_A 281 REFNRLQGIDLKSYQCETIFVDPPRSG--L--------------------------DSETEKMVQAYPRILYISCNPETL 332 (369)
T ss_dssp CCCTTGGGSCGGGCCEEEEEECCCTTC--C--------------------------CHHHHHHHTTSSEEEEEESCHHHH
T ss_pred cccccccccccccCCCCEEEECcCccc--c--------------------------HHHHHHHHhCCCEEEEEECCHHHH
Confidence 27999999999964 1 233455567899999999974322
Q ss_pred hhHHHHHHHHhhCCCceEecCCCCCCCccccCCceEEEcCCCCCCCceEEEEEEec
Q 009708 472 ENEERVEAFLLRHPEFSIDPADGLVPSDFVTKHGFFFSDPIKHSLDGAFAARLVRA 527 (528)
Q Consensus 472 Ene~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~dGff~a~l~k~ 527 (528)
..-+..+.. ++++..+. -+..+||.+..+- +|+|+|+
T Consensus 333 --ard~~~l~~---~y~~~~~~------------~~D~FP~T~HvE~--v~ll~r~ 369 (369)
T 3bt7_A 333 --CKNLETLSQ---THKVERLA------------LFDQFPYTHHMQC--GVLLTAK 369 (369)
T ss_dssp --HHHHHHHHH---HEEEEEEE------------EECCSTTSSCCEE--EEEEEEC
T ss_pred --HHHHHHHhh---CcEEEEEE------------eeccCCCCCcEEE--EEEEEeC
Confidence 122223332 35554331 1234687777665 6777663
No 53
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.54 E-value=5.7e-14 Score=131.43 Aligned_cols=111 Identities=18% Similarity=0.198 Sum_probs=90.2
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC-CCCCCEEEE
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-TVKCDKVLL 412 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~-~~~fD~Vl~ 412 (528)
.++.+|||+|||+|..++.+++. +..+|+|+|+|+.+++.+++|++.++++ +++++++|+.++.... .++||+|++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~fD~i~~ 119 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGLS-GATLRRGAVAAVVAAGTTSPVDLVLA 119 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTCS-CEEEEESCHHHHHHHCCSSCCSEEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEccHHHHHhhccCCCccEEEE
Confidence 56889999999999999988774 4568999999999999999999999985 4999999998875432 478999999
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhc--cCcCCCEEEEEcCCC
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASL--LVKPGGVLVYSTCSI 468 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~--~LkpGG~LvysTcs~ 468 (528)
|||+.. ... ....++..+.+ +|||||++++.+.+-
T Consensus 120 ~~p~~~--------------~~~-------~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 120 DPPYNV--------------DSA-------DVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp CCCTTS--------------CHH-------HHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCCCCc--------------chh-------hHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 999732 011 22345777777 999999999876543
No 54
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.53 E-value=5.5e-14 Score=137.56 Aligned_cols=139 Identities=22% Similarity=0.285 Sum_probs=105.8
Q ss_pred eecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc-CCCccEEEEcCccc
Q 009708 319 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHADLR 397 (528)
Q Consensus 319 ~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~-g~~~~i~~~~~D~~ 397 (528)
+....+..+...+++.++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++.+ |.+ +++++++|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~-~v~~~~~d~~ 158 (258)
T 2pwy_A 80 TYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVE-NVRFHLGKLE 158 (258)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCC-CEEEEESCGG
T ss_pred ccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC-CEEEEECchh
Confidence 33334456667778889999999999999999999998766789999999999999999999998 854 4899999998
Q ss_pred cccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHH
Q 009708 398 TFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERV 477 (528)
Q Consensus 398 ~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v 477 (528)
+... ..+.||+|++|+|.. ..+++++.++|+|||++++.+.+. +....+
T Consensus 159 ~~~~-~~~~~D~v~~~~~~~---------------------------~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~ 207 (258)
T 2pwy_A 159 EAEL-EEAAYDGVALDLMEP---------------------------WKVLEKAALALKPDRFLVAYLPNI---TQVLEL 207 (258)
T ss_dssp GCCC-CTTCEEEEEEESSCG---------------------------GGGHHHHHHHEEEEEEEEEEESCH---HHHHHH
T ss_pred hcCC-CCCCcCEEEECCcCH---------------------------HHHHHHHHHhCCCCCEEEEEeCCH---HHHHHH
Confidence 7621 235799999988751 135888999999999999776543 222233
Q ss_pred HHHHhhCCCceEe
Q 009708 478 EAFLLRHPEFSID 490 (528)
Q Consensus 478 ~~~l~~~~~~~~~ 490 (528)
...+.+ .+|...
T Consensus 208 ~~~l~~-~gf~~~ 219 (258)
T 2pwy_A 208 VRAAEA-HPFRLE 219 (258)
T ss_dssp HHHHTT-TTEEEE
T ss_pred HHHHHH-CCCceE
Confidence 344554 355543
No 55
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.53 E-value=1.1e-13 Score=127.29 Aligned_cols=129 Identities=17% Similarity=0.211 Sum_probs=100.1
Q ss_pred HHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCC
Q 009708 325 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 404 (528)
Q Consensus 325 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~ 404 (528)
..+...+.+.++.+|||+|||+|..+..++... +..+|+++|+++.+++.++++++.+|++.++ ++++|+....+...
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~ 92 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVP 92 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCC
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccC
Confidence 445556678889999999999999999999874 4689999999999999999999999998557 88888865433323
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhC
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRH 484 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~ 484 (528)
++||+|+++.+... ..+++.+.++|||||++++++++. ++...+..++.++
T Consensus 93 ~~~D~i~~~~~~~~--------------------------~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 93 DNPDVIFIGGGLTA--------------------------PGVFAAAWKRLPVGGRLVANAVTV---ESEQMLWALRKQF 143 (178)
T ss_dssp SCCSEEEECC-TTC--------------------------TTHHHHHHHTCCTTCEEEEEECSH---HHHHHHHHHHHHH
T ss_pred CCCCEEEECCcccH--------------------------HHHHHHHHHhcCCCCEEEEEeecc---ccHHHHHHHHHHc
Confidence 68999998665521 235889999999999999887754 3344455666655
No 56
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.52 E-value=5.2e-14 Score=129.96 Aligned_cols=118 Identities=18% Similarity=0.242 Sum_probs=92.1
Q ss_pred HHHhcC-CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCC
Q 009708 327 VVAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 405 (528)
Q Consensus 327 ~~~~l~-~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~ 405 (528)
+...+. ..++.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++|++.+++.++++++++|+.+.......
T Consensus 22 ~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 99 (177)
T 2esr_A 22 IFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTG 99 (177)
T ss_dssp HHHHHCSCCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCS
T ss_pred HHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcC
Confidence 333444 567889999999999999999875 45799999999999999999999999876799999999885443346
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHH--hccCcCCCEEEEEcCCCC
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA--SLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a--~~~LkpGG~LvysTcs~~ 469 (528)
+||+|++|+|+.. ... .++++.. .++|||||++++++++..
T Consensus 100 ~fD~i~~~~~~~~----------------~~~-------~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 100 RFDLVFLDPPYAK----------------ETI-------VATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp CEEEEEECCSSHH----------------HHH-------HHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCEEEECCCCCc----------------chH-------HHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 7999999999720 111 2223333 499999999998877644
No 57
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.52 E-value=8.6e-14 Score=138.21 Aligned_cols=126 Identities=23% Similarity=0.303 Sum_probs=100.6
Q ss_pred ceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc-C-CCccEEEE
Q 009708 315 GLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-Q-VNSVIRTI 392 (528)
Q Consensus 315 G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~-g-~~~~i~~~ 392 (528)
+...++......+...+++.++.+|||+|||+|..+..++..+++.++|+++|+++.+++.+++|++.. | +..+++++
T Consensus 79 ~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~ 158 (280)
T 1i9g_A 79 GPQVIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLV 158 (280)
T ss_dssp CSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEE
T ss_pred cceeecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 333344445556677788899999999999999999999987766789999999999999999999988 6 33359999
Q ss_pred cCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 393 HADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 393 ~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
++|+..... ..+.||+|++|+|. | | .++.++.++|+|||++++++++.
T Consensus 159 ~~d~~~~~~-~~~~~D~v~~~~~~---------~---~---------------~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 159 VSDLADSEL-PDGSVDRAVLDMLA---------P---W---------------EVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp CSCGGGCCC-CTTCEEEEEEESSC---------G---G---------------GGHHHHHHHEEEEEEEEEEESSH
T ss_pred ECchHhcCC-CCCceeEEEECCcC---------H---H---------------HHHHHHHHhCCCCCEEEEEeCCH
Confidence 999987642 23679999998774 1 1 25888999999999999877653
No 58
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.52 E-value=2.4e-14 Score=138.88 Aligned_cols=125 Identities=16% Similarity=0.158 Sum_probs=99.5
Q ss_pred ecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccc
Q 009708 320 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 399 (528)
Q Consensus 320 Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~ 399 (528)
+.....++..++...++.+|||+|||+|..++.++..+++.++|+++|+++.+++.++++++..|+.++++++++|+.+.
T Consensus 57 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 136 (232)
T 3cbg_A 57 SPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALAT 136 (232)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 34444555555444567799999999999999999887656899999999999999999999999987799999998764
Q ss_pred cccC---C--CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 400 ADNS---T--VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 400 ~~~~---~--~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
.... . ++||+|++|++.. . +..+++.+.++|+|||+|++.++.+.
T Consensus 137 l~~l~~~~~~~~fD~V~~d~~~~------------------~-------~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 137 LEQLTQGKPLPEFDLIFIDADKR------------------N-------YPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp HHHHHTSSSCCCEEEEEECSCGG------------------G-------HHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred HHHHHhcCCCCCcCEEEECCCHH------------------H-------HHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 3221 1 6799999997641 1 23468899999999999999888754
No 59
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.52 E-value=5.2e-14 Score=135.47 Aligned_cols=125 Identities=16% Similarity=0.140 Sum_probs=99.1
Q ss_pred eecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc
Q 009708 319 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 398 (528)
Q Consensus 319 ~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~ 398 (528)
+......++..++...++.+|||+|||+|..++.+++.+++.++|+++|+++.+++.++++++..|+.++++++++|+.+
T Consensus 53 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 132 (229)
T 2avd_A 53 MTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALE 132 (229)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHH
Confidence 33344445555555567789999999999999999987665689999999999999999999999997679999999976
Q ss_pred ccccC--C---CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 399 FADNS--T---VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 399 ~~~~~--~---~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
..... . ++||+|++|++.. .+..+++.+.++|+|||++++.++.+
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~~~-------------------------~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDADKE-------------------------NCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSCST-------------------------THHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred HHHHHHhcCCCCCccEEEECCCHH-------------------------HHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 53321 1 5799999998741 12346888999999999999877653
No 60
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.52 E-value=1.7e-14 Score=145.35 Aligned_cols=137 Identities=11% Similarity=0.054 Sum_probs=100.6
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHH--cCC-CccEEEEcCccccccccCCCCCCEEE
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL--HQV-NSVIRTIHADLRTFADNSTVKCDKVL 411 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~--~g~-~~~i~~~~~D~~~~~~~~~~~fD~Vl 411 (528)
.+.+|||+|||+|+.+..+++.. +..+|+++|+|+.+++.+++++.. .++ ..+++++++|+..+.....++||+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 45799999999999999998763 457999999999999999999865 233 23599999999886544456899999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC--CCchhhHHHHHHHHhhCCCceE
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS--IDPEENEERVEAFLLRHPEFSI 489 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs--~~~~Ene~~v~~~l~~~~~~~~ 489 (528)
+|+|+...|... ...+.++++.+.++|||||+|++.+|+ +..++...++..+.+.++.+.+
T Consensus 169 ~d~~~~~~~~~~-----------------~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 231 (296)
T 1inl_A 169 IDSTDPTAGQGG-----------------HLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRV 231 (296)
T ss_dssp EEC---------------------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEE
T ss_pred EcCCCcccCchh-----------------hhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEE
Confidence 999873222100 002356789999999999999999988 4456666677666666665544
No 61
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.52 E-value=3.3e-14 Score=134.90 Aligned_cols=110 Identities=15% Similarity=0.165 Sum_probs=88.1
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCC-ccEEEEcCcccccccc-CCCC-CCEEE
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN-SVIRTIHADLRTFADN-STVK-CDKVL 411 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~-~~i~~~~~D~~~~~~~-~~~~-fD~Vl 411 (528)
++.+|||+|||+|..++.++.. +..+|+|+|+|+.+++.+++|++.+|+. ++++++++|+.++... ..++ ||+|+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEE
Confidence 5789999999999999987765 3469999999999999999999999983 3499999999886543 2467 99999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHH--hccCcCCCEEEEEcCCCC
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA--SLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a--~~~LkpGG~LvysTcs~~ 469 (528)
+|||+. .+ .. ..+++.+ .++|||||++++++|+..
T Consensus 131 ~~~~~~-~~---------------~~-------~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 131 LDPPFH-FN---------------LA-------EQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp ECCCSS-SC---------------HH-------HHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred ECCCCC-Cc---------------cH-------HHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 999962 11 11 2235555 678999999999988765
No 62
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.51 E-value=6.6e-14 Score=139.36 Aligned_cols=122 Identities=25% Similarity=0.261 Sum_probs=95.8
Q ss_pred eEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcc
Q 009708 317 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 396 (528)
Q Consensus 317 ~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~ 396 (528)
|..|.........+..+.++++|||+|||+|.+++.+|...+ .++|+|+|+++.+++.+++|++.+|+++ +.++++|+
T Consensus 101 f~~~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~-~~~~~~d~ 178 (272)
T 3a27_A 101 MWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNN-VIPILADN 178 (272)
T ss_dssp CCCGGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSS-EEEEESCG
T ss_pred EECCCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEECCh
Confidence 334443333333344567889999999999999999998743 5699999999999999999999999986 78999999
Q ss_pred ccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 397 RTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 397 ~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
.++ +. ..+||+|++|||. +. .+++..+.+.|+|||+++++ |...
T Consensus 179 ~~~-~~-~~~~D~Vi~d~p~---~~-----------------------~~~l~~~~~~LkpgG~l~~s-~~~~ 222 (272)
T 3a27_A 179 RDV-EL-KDVADRVIMGYVH---KT-----------------------HKFLDKTFEFLKDRGVIHYH-ETVA 222 (272)
T ss_dssp GGC-CC-TTCEEEEEECCCS---SG-----------------------GGGHHHHHHHEEEEEEEEEE-EEEE
T ss_pred HHc-Cc-cCCceEEEECCcc---cH-----------------------HHHHHHHHHHcCCCCEEEEE-EcCc
Confidence 987 33 4689999999997 11 12488889999999988754 5543
No 63
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.50 E-value=7.4e-14 Score=131.68 Aligned_cols=123 Identities=18% Similarity=0.234 Sum_probs=91.9
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc------CC--
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN------ST-- 404 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~------~~-- 404 (528)
+++|.+|||+|||||+++..+++. .++|+|+|+++.. ..++ ++++++|+.+.... ..
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~~~-v~~~~~D~~~~~~~~~~~~~~~~~ 87 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EIAG-VRFIRCDIFKETIFDDIDRALREE 87 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CCTT-CEEEECCTTSSSHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cCCC-eEEEEccccCHHHHHHHHHHhhcc
Confidence 467899999999999999999886 6899999999852 2343 88999999874311 11
Q ss_pred --CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHh
Q 009708 405 --VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLL 482 (528)
Q Consensus 405 --~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~ 482 (528)
++||+|++|+++..+|.. ..+......++..+++.+.++|||||.|+ |.++..++...+..+++
T Consensus 88 ~~~~~D~Vlsd~~~~~~g~~-----------~~d~~~~~~l~~~~l~~a~~~LkpGG~lv---~k~~~~~~~~~~~~~l~ 153 (191)
T 3dou_A 88 GIEKVDDVVSDAMAKVSGIP-----------SRDHAVSYQIGQRVMEIAVRYLRNGGNVL---LKQFQGDMTNDFIAIWR 153 (191)
T ss_dssp TCSSEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHEEEEEEEE---EEEECSTHHHHHHHHHG
T ss_pred cCCcceEEecCCCcCCCCCc-----------ccCHHHHHHHHHHHHHHHHHHccCCCEEE---EEEcCCCCHHHHHHHHH
Confidence 489999999988766651 12333445667889999999999999999 44445555556667776
Q ss_pred hC
Q 009708 483 RH 484 (528)
Q Consensus 483 ~~ 484 (528)
.+
T Consensus 154 ~~ 155 (191)
T 3dou_A 154 KN 155 (191)
T ss_dssp GG
T ss_pred Hh
Confidence 54
No 64
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.49 E-value=1.5e-14 Score=136.89 Aligned_cols=143 Identities=13% Similarity=0.129 Sum_probs=79.0
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---CCCCCCEE
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---STVKCDKV 410 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---~~~~fD~V 410 (528)
.++.+|||+|||+|..+..++... +..+++++|+++.+++.+++|+..++. +++++++|+.+.... ..++||+|
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~fD~i 105 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIEWLIERAERGRPWHAI 105 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC---------------------CCHHHHHHHHHHHHHTTCCBSEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHhhhhhhhhccCcccEE
Confidence 678899999999999999999974 457999999999999999999999887 488999999874332 13689999
Q ss_pred EEcCCCCCCccccCCchhhccCCH----HHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHh
Q 009708 411 LLDAPCSGLGVLSKRADLRWNRRL----EDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLL 482 (528)
Q Consensus 411 l~D~Pcsg~G~~~~~pd~~~~~~~----~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~ 482 (528)
++|||+...+.+...+.......+ ..-......+..+++.+.++|||||++++.++.... .+.+..++.
T Consensus 106 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~---~~~~~~~l~ 178 (215)
T 4dzr_A 106 VSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQ---ADEVARLFA 178 (215)
T ss_dssp EECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSC---HHHHHHHTG
T ss_pred EECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCcc---HHHHHHHHH
Confidence 999999766554332111000000 000011223467899999999999995555554332 334455555
No 65
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.49 E-value=5.5e-14 Score=137.00 Aligned_cols=147 Identities=14% Similarity=0.138 Sum_probs=105.8
Q ss_pred ceeEee-cchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHH---cCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEE
Q 009708 315 GLCAVQ-DESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASC---LSGQGLVYAIDINKGRLRILNETAKLHQVNSVIR 390 (528)
Q Consensus 315 G~~~~Q-d~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~---~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~ 390 (528)
|....| .....++..++...++.+|||+|||+|..+..+++. +.+.++|+|+|+++.+++.++ ++.++++
T Consensus 60 ~~~~~~~p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~ 133 (236)
T 2bm8_A 60 GLRMLKDPDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENIT 133 (236)
T ss_dssp TEECCSCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEE
T ss_pred cccccCCHHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceE
Confidence 334445 333444555555455789999999999999999987 456789999999999998776 2224599
Q ss_pred EEcCccccc---cccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhc-cCcCCCEEEEEcC
Q 009708 391 TIHADLRTF---ADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASL-LVKPGGVLVYSTC 466 (528)
Q Consensus 391 ~~~~D~~~~---~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~-~LkpGG~LvysTc 466 (528)
++++|+... ......+||+|++|... . + ...+|.++.+ +|||||+|++.++
T Consensus 134 ~~~gD~~~~~~l~~~~~~~fD~I~~d~~~---------~---------~-------~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 134 LHQGDCSDLTTFEHLREMAHPLIFIDNAH---------A---------N-------TFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEECCSSCSGGGGGGSSSCSSEEEEESSC---------S---------S-------HHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EEECcchhHHHHHhhccCCCCEEEECCch---------H---------h-------HHHHHHHHHHhhCCCCCEEEEEeC
Confidence 999999874 22222379999998642 0 0 1236888886 9999999998654
Q ss_pred -CCCchhhHHHHHHHHhhCC-CceEecC
Q 009708 467 -SIDPEENEERVEAFLLRHP-EFSIDPA 492 (528)
Q Consensus 467 -s~~~~Ene~~v~~~l~~~~-~~~~~~~ 492 (528)
.+.+..+.+.+..+++.++ +|++...
T Consensus 189 ~~~~~~~~~~~~~~~l~~~~~~f~~~~~ 216 (236)
T 2bm8_A 189 IPYWYRYAPQLFSEYLGAFRDVLSMDML 216 (236)
T ss_dssp HHHHHHHCHHHHHHHHHTTTTTEEEETT
T ss_pred cccccccCHHHHHHHHHhCcccEEEcch
Confidence 3334556668889999998 7887654
No 66
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.49 E-value=7.6e-14 Score=135.49 Aligned_cols=92 Identities=25% Similarity=0.316 Sum_probs=77.4
Q ss_pred HHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCC
Q 009708 325 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 404 (528)
Q Consensus 325 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~ 404 (528)
.++..+....++.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.+++|++.+|+..+++++++|+..+.. .
T Consensus 68 ~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~ 142 (241)
T 3gdh_A 68 HIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS--F 142 (241)
T ss_dssp HHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG--G
T ss_pred HHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc--c
Confidence 33333333447889999999999999999985 479999999999999999999999996569999999998763 3
Q ss_pred CCCCEEEEcCCCCCCcc
Q 009708 405 VKCDKVLLDAPCSGLGV 421 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~ 421 (528)
++||+|++||||.+.+.
T Consensus 143 ~~~D~v~~~~~~~~~~~ 159 (241)
T 3gdh_A 143 LKADVVFLSPPWGGPDY 159 (241)
T ss_dssp CCCSEEEECCCCSSGGG
T ss_pred CCCCEEEECCCcCCcch
Confidence 68999999999977554
No 67
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.48 E-value=6.2e-14 Score=138.38 Aligned_cols=128 Identities=21% Similarity=0.285 Sum_probs=99.7
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
+.++.+|||+|||+|..+..+++. +.++|+|+|+|+.+++.++++++..|++++++++++|+.+++. ..++||+|++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~i~~ 120 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF-RNEELDLIWS 120 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC-CTTCEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC-CCCCEEEEEE
Confidence 677899999999999999999986 4569999999999999999999999998789999999987652 2478999998
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHH-hhCCC
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFL-LRHPE 486 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l-~~~~~ 486 (528)
..+.... . ...+++.+.++|||||+++++++++........+..+. ..++.
T Consensus 121 ~~~~~~~-------------~----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (267)
T 3kkz_A 121 EGAIYNI-------------G----------FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPE 172 (267)
T ss_dssp SSCGGGT-------------C----------HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTT
T ss_pred cCCceec-------------C----------HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCC
Confidence 6554211 1 13469999999999999999988755443333333333 44443
No 68
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.48 E-value=9.4e-14 Score=134.70 Aligned_cols=108 Identities=17% Similarity=0.242 Sum_probs=89.2
Q ss_pred cCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc--CCCCCC
Q 009708 331 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STVKCD 408 (528)
Q Consensus 331 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~--~~~~fD 408 (528)
+.++||++|||+|||+|..+.++|..+++.|+|+|+|+++.+++.++++++..+ | +..+.+|....... ....+|
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~--n-i~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR--N-IFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT--T-EEEEESCTTCGGGGTTTCCCEE
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc--C-eeEEEEeccCccccccccceEE
Confidence 458999999999999999999999999999999999999999999998876643 3 78888888764332 246799
Q ss_pred EEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 409 KVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 409 ~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
.|++|.+... + ...++.++.++|||||+++++.
T Consensus 150 vVf~d~~~~~-----------------~-------~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 150 GLYADVAQPE-----------------Q-------AAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEEECCCCTT-----------------H-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeccCCh-----------------h-------HHHHHHHHHHhccCCCEEEEEE
Confidence 9999987731 1 2346899999999999999764
No 69
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.47 E-value=1.4e-13 Score=130.74 Aligned_cols=108 Identities=14% Similarity=0.188 Sum_probs=85.5
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 414 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~ 414 (528)
++.+|||+|||+|..++.++.. +..+|+++|+|+.+++.+++|++.++++ +++++++|+.++.+...++||+|++||
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~--~~~~V~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~fD~V~~~~ 130 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSR--YAAGATLIEMDRAVSQQLIKNLATLKAG-NARVVNSNAMSFLAQKGTPHNIVFVDP 130 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCHHHHHSSCCCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHhc--CCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEECCHHHHHhhcCCCCCEEEECC
Confidence 5789999999999999987775 2359999999999999999999999985 499999999885543346899999999
Q ss_pred CCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHH--hccCcCCCEEEEEcCCC
Q 009708 415 PCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA--SLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 415 Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a--~~~LkpGG~LvysTcs~ 468 (528)
|+. .+. . ..+++.+ .++|+|||+|++++|+.
T Consensus 131 p~~-~~~---------------~-------~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 131 PFR-RGL---------------L-------EETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp SSS-TTT---------------H-------HHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CCC-CCc---------------H-------HHHHHHHHhcCccCCCcEEEEEECCC
Confidence 952 111 1 1224444 45699999999888763
No 70
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.47 E-value=9.3e-14 Score=142.51 Aligned_cols=102 Identities=29% Similarity=0.448 Sum_probs=90.9
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.+|.+|||+|||+|+.++. +. +..+|+|+|+|+.+++.+++|++.+|+.++++++++|+.++. .+||+|++|
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----~~fD~Vi~d 265 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----VKGNRVIMN 265 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----CCEEEEEEC
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----CCCcEEEEC
Confidence 4788999999999999999 75 367999999999999999999999999656999999998876 679999999
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
||..+. +++..+.++|+|||.|++++|+..
T Consensus 266 pP~~~~--------------------------~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 266 LPKFAH--------------------------KFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp CTTTGG--------------------------GGHHHHHHHEEEEEEEEEEEEESS
T ss_pred CcHhHH--------------------------HHHHHHHHHcCCCCEEEEEEeecC
Confidence 998531 358889999999999999999987
No 71
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.46 E-value=3e-13 Score=131.50 Aligned_cols=126 Identities=18% Similarity=0.206 Sum_probs=99.8
Q ss_pred eecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc
Q 009708 319 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 398 (528)
Q Consensus 319 ~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~ 398 (528)
++.....++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++..|+.++++++++|+..
T Consensus 44 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 44 ISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALE 123 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH
Confidence 34445556666666667889999999999999999998765689999999999999999999999998779999999876
Q ss_pred ccccC---------------C-CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEE
Q 009708 399 FADNS---------------T-VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLV 462 (528)
Q Consensus 399 ~~~~~---------------~-~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lv 462 (528)
..+.. . ++||+|++|... ... ..+++.+.++|+|||+|+
T Consensus 124 ~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~------------------~~~-------~~~l~~~~~~L~pgG~lv 178 (239)
T 2hnk_A 124 TLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADK------------------ENY-------PNYYPLILKLLKPGGLLI 178 (239)
T ss_dssp HHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG------------------GGH-------HHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHhhcccccccccccCCCCCcCEEEEeCCH------------------HHH-------HHHHHHHHHHcCCCeEEE
Confidence 43211 1 679999998432 111 245888999999999999
Q ss_pred EEcCCCC
Q 009708 463 YSTCSID 469 (528)
Q Consensus 463 ysTcs~~ 469 (528)
+.++.+.
T Consensus 179 ~~~~~~~ 185 (239)
T 2hnk_A 179 ADNVLWD 185 (239)
T ss_dssp EECSSGG
T ss_pred EEccccC
Confidence 9876543
No 72
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.46 E-value=1.2e-12 Score=121.58 Aligned_cols=121 Identities=20% Similarity=0.283 Sum_probs=99.8
Q ss_pred chHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCc-cEEEEcCcccccc
Q 009708 322 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS-VIRTIHADLRTFA 400 (528)
Q Consensus 322 ~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~-~i~~~~~D~~~~~ 400 (528)
..+..+...+...++.+|||+|||+|..+..++.. ..+++++|+++.+++.+++++..+++++ +++++++|+....
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV 115 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc
Confidence 45667777788888999999999999999999876 5799999999999999999999999875 5899999998754
Q ss_pred ccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 401 DNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 401 ~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
. .++||+|++++|... ... ....+++.+.++|+|||.+++.+++.
T Consensus 116 ~--~~~~D~v~~~~~~~~--------------~~~-------~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 116 K--DRKYNKIITNPPIRA--------------GKE-------VLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp T--TSCEEEEEECCCSTT--------------CHH-------HHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred c--cCCceEEEECCCccc--------------chh-------HHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 3 468999999988731 011 23456999999999999999887664
No 73
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.45 E-value=7.7e-13 Score=135.39 Aligned_cols=125 Identities=19% Similarity=0.349 Sum_probs=95.3
Q ss_pred cceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcC---------
Q 009708 314 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ--------- 384 (528)
Q Consensus 314 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g--------- 384 (528)
.|....+......+...+++.+|.+|||+|||+|..+..++..+++.++|+++|+++.+++.+++|++..|
T Consensus 84 ~~~~~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~ 163 (336)
T 2b25_A 84 RGTAITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVE 163 (336)
T ss_dssp CSSCCCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSS
T ss_pred CCCcccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccccc
Confidence 34444444445666677788999999999999999999999876666899999999999999999998743
Q ss_pred -CCccEEEEcCcccccccc-CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEE
Q 009708 385 -VNSVIRTIHADLRTFADN-STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLV 462 (528)
Q Consensus 385 -~~~~i~~~~~D~~~~~~~-~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lv 462 (528)
...+++++++|+.+.... ..+.||+|++|+|... .++.++.++|||||+|+
T Consensus 164 ~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~---------------------------~~l~~~~~~LkpgG~lv 216 (336)
T 2b25_A 164 EWPDNVDFIHKDISGATEDIKSLTFDAVALDMLNPH---------------------------VTLPVFYPHLKHGGVCA 216 (336)
T ss_dssp CCCCCEEEEESCTTCCC-------EEEEEECSSSTT---------------------------TTHHHHGGGEEEEEEEE
T ss_pred ccCCceEEEECChHHcccccCCCCeeEEEECCCCHH---------------------------HHHHHHHHhcCCCcEEE
Confidence 223599999999876422 2357999999977521 14888999999999998
Q ss_pred EEc
Q 009708 463 YST 465 (528)
Q Consensus 463 ysT 465 (528)
..+
T Consensus 217 ~~~ 219 (336)
T 2b25_A 217 VYV 219 (336)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 74
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.45 E-value=3.8e-13 Score=133.11 Aligned_cols=124 Identities=22% Similarity=0.216 Sum_probs=94.7
Q ss_pred cchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccc
Q 009708 321 DESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 399 (528)
Q Consensus 321 d~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~ 399 (528)
+....++... +++|.+|||+|||+|..+..+++.+. ++.+|+|+|+|+.+++.++++++..+...+|+++++|+.++
T Consensus 58 ~~i~~l~~~~--~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~ 135 (261)
T 4gek_A 58 SMIGMLAERF--VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI 135 (261)
T ss_dssp HHHHHHHHHH--CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC
T ss_pred HHHHHHHHHh--CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc
Confidence 3334444444 46899999999999999999998764 34599999999999999999999999887799999999887
Q ss_pred cccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 400 ADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 400 ~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
+. +.||+|++.- ++.. ....+. ..+|+++.+.|||||+|+++.-...
T Consensus 136 ~~---~~~d~v~~~~------~l~~-------~~~~~~-------~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 136 AI---ENASMVVLNF------TLQF-------LEPSER-------QALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp CC---CSEEEEEEES------CGGG-------SCHHHH-------HHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred cc---cccccceeee------eeee-------cCchhH-------hHHHHHHHHHcCCCcEEEEEeccCC
Confidence 53 4699998742 1111 111221 3469999999999999998765443
No 75
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.44 E-value=2.5e-13 Score=125.94 Aligned_cols=113 Identities=19% Similarity=0.242 Sum_probs=88.5
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---CCCCCCE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---STVKCDK 409 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---~~~~fD~ 409 (528)
..++.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++|++.+++.++++++++|+.+.... ..++||+
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 119 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDL 119 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred hcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCE
Confidence 357889999999999999998874 35799999999999999999999999866699999999875431 1468999
Q ss_pred EEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHH--HhccCcCCCEEEEEcCCCCc
Q 009708 410 VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDA--ASLLVKPGGVLVYSTCSIDP 470 (528)
Q Consensus 410 Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~--a~~~LkpGG~LvysTcs~~~ 470 (528)
|++|+|+. .+ .... .+.. +.++|+|||++++++++...
T Consensus 120 i~~~~~~~-~~------------~~~~----------~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 120 VLLDPPYA-KQ------------EIVS----------QLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp EEECCCGG-GC------------CHHH----------HHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred EEECCCCC-ch------------hHHH----------HHHHHHHhcccCCCCEEEEEeCCccc
Confidence 99999962 00 0111 1222 38899999999998877543
No 76
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.43 E-value=5.4e-13 Score=138.77 Aligned_cols=131 Identities=15% Similarity=0.049 Sum_probs=101.9
Q ss_pred cchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCc--cEEEEcCcccc
Q 009708 321 DESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS--VIRTIHADLRT 398 (528)
Q Consensus 321 d~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~--~i~~~~~D~~~ 398 (528)
|..+.++...+...++.+|||+|||+|..++.++... +..+|+++|+|+.+++.+++|++.+|+.+ .++++.+|+..
T Consensus 208 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~ 286 (375)
T 4dcm_A 208 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 286 (375)
T ss_dssp CHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT
T ss_pred cHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc
Confidence 5567778888888888899999999999999999873 46799999999999999999999999763 47889999987
Q ss_pred ccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCch
Q 009708 399 FADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPE 471 (528)
Q Consensus 399 ~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~ 471 (528)
... .++||+|++|||+.....+.. ....++++.+.++|||||++++++.+..+.
T Consensus 287 ~~~--~~~fD~Ii~nppfh~~~~~~~-----------------~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~ 340 (375)
T 4dcm_A 287 GVE--PFRFNAVLCNPPFHQQHALTD-----------------NVAWEMFHHARRCLKINGELYIVANRHLDY 340 (375)
T ss_dssp TCC--TTCEEEEEECCCC-------C-----------------CHHHHHHHHHHHHEEEEEEEEEEEETTSCH
T ss_pred cCC--CCCeeEEEECCCcccCcccCH-----------------HHHHHHHHHHHHhCCCCcEEEEEEECCcCH
Confidence 432 368999999999842111100 012357999999999999999876555443
No 77
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.43 E-value=4.3e-13 Score=129.06 Aligned_cols=138 Identities=13% Similarity=0.058 Sum_probs=100.9
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc--cCCCCCCEEEE
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCDKVLL 412 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~--~~~~~fD~Vl~ 412 (528)
++.+|||+|||+|..+..+|+.. +...|+|+|+++.+++.++++++..|++| +.++++|+.++.. ...++||.|++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~n-v~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSN-LRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSS-EEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCc-EEEEECCHHHHHHHHcCCCChheEEE
Confidence 57799999999999999999874 46799999999999999999999999987 9999999988533 23578999999
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCCceEec
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPEFSIDP 491 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~~ 491 (528)
+-|.. +.+....+.+. .|..+++.+.++|||||+|+++|-. ..-.+.+...+..+++|+...
T Consensus 112 ~~~~p----~~~~~~~~rr~----------~~~~~l~~~~r~LkpGG~l~i~td~---~~~~~~~~~~~~~~~~~~~~~ 173 (218)
T 3dxy_A 112 FFPDP----WHKARHNKRRI----------VQVPFAELVKSKLQLGGVFHMATDW---EPYAEHMLEVMSSIDGYKNLS 173 (218)
T ss_dssp ESCCC----CCSGGGGGGSS----------CSHHHHHHHHHHEEEEEEEEEEESC---HHHHHHHHHHHHTSTTEEECC
T ss_pred eCCCC----ccchhhhhhhh----------hhHHHHHHHHHHcCCCcEEEEEeCC---HHHHHHHHHHHHhCCCccccc
Confidence 73321 11111111110 1234789999999999999987743 222233445666777777654
No 78
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.43 E-value=2.2e-12 Score=124.40 Aligned_cols=127 Identities=14% Similarity=0.154 Sum_probs=100.4
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
+.+|++|||+|||+|..++.++.. .+.++|+|+|+++.+++.+++|++++|+.++|+++++|+....+. ..+||.|++
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~Ivi 90 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITI 90 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-CcCCCEEEE
Confidence 457889999999999999999986 446799999999999999999999999998899999999754332 126999886
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCCceEec
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPEFSIDP 491 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~~ 491 (528)
.|.|- .+-.++|..+...|+++|+||++.. .+.+.+..+|.++ +|.+..
T Consensus 91 ----aG~Gg--------------------~~i~~Il~~~~~~L~~~~~lVlq~~-----~~~~~vr~~L~~~-Gf~i~~ 139 (225)
T 3kr9_A 91 ----AGMGG--------------------RLIARILEEGLGKLANVERLILQPN-----NREDDLRIWLQDH-GFQIVA 139 (225)
T ss_dssp ----EEECH--------------------HHHHHHHHHTGGGCTTCCEEEEEES-----SCHHHHHHHHHHT-TEEEEE
T ss_pred ----cCCCh--------------------HHHHHHHHHHHHHhCCCCEEEEECC-----CCHHHHHHHHHHC-CCEEEE
Confidence 23332 1224569999999999999998654 2556777888876 576654
No 79
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.42 E-value=5.8e-13 Score=129.61 Aligned_cols=128 Identities=20% Similarity=0.159 Sum_probs=98.1
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc--CCCCCCEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STVKCDKV 410 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~--~~~~fD~V 410 (528)
..++.+|||+|||+|..++.++.. .+.++|+|+|+|+.+++.++++++.+|+++ ++++++|+.++... ..++||+|
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKIC-FPHLHVTIVDSLNKRITFLEKLSEALQLEN-TTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEESCHHHHTTCTTTTTCEEEE
T ss_pred cCCCCEEEEecCCCCHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEeccHHHhcccccccCCccEE
Confidence 346789999999999999999975 346799999999999999999999999986 99999999886531 14689999
Q ss_pred EEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCCceEe
Q 009708 411 LLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPEFSID 490 (528)
Q Consensus 411 l~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~ 490 (528)
+++... + ...+++.+.++|||||++++..+....++-++ +...+... +|++.
T Consensus 146 ~~~~~~-------------------~-------~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~-~~~~l~~~-g~~~~ 197 (240)
T 1xdz_A 146 TARAVA-------------------R-------LSVLSELCLPLVKKNGLFVALKAASAEEELNA-GKKAITTL-GGELE 197 (240)
T ss_dssp EEECCS-------------------C-------HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHH-HHHHHHHT-TEEEE
T ss_pred EEeccC-------------------C-------HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHH-HHHHHHHc-CCeEe
Confidence 986521 1 23569999999999999998877665544333 33445544 45443
No 80
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.42 E-value=9.7e-13 Score=127.85 Aligned_cols=130 Identities=6% Similarity=0.075 Sum_probs=100.6
Q ss_pred cchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc
Q 009708 321 DESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA 400 (528)
Q Consensus 321 d~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~ 400 (528)
......+...+++.++++|||+|||+|..+..+++. ..+|+++|+++.+++.++++++.+++..+++++++|+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc
Confidence 334456666778889999999999999999999987 57999999999999999999999998656999999998754
Q ss_pred ccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHH
Q 009708 401 DNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAF 480 (528)
Q Consensus 401 ~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~ 480 (528)
. ....||+|++|+|. | ..+++.+.++|+|||++++.+.+. +....+...
T Consensus 154 ~-~~~~~D~v~~~~~~---------~------------------~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~ 202 (248)
T 2yvl_A 154 V-PEGIFHAAFVDVRE---------P------------------WHYLEKVHKSLMEGAPVGFLLPTA---NQVIKLLES 202 (248)
T ss_dssp C-CTTCBSEEEECSSC---------G------------------GGGHHHHHHHBCTTCEEEEEESSH---HHHHHHHHH
T ss_pred c-CCCcccEEEECCcC---------H------------------HHHHHHHHHHcCCCCEEEEEeCCH---HHHHHHHHH
Confidence 1 13579999998773 1 124788899999999999776443 222334445
Q ss_pred HhhC
Q 009708 481 LLRH 484 (528)
Q Consensus 481 l~~~ 484 (528)
+.++
T Consensus 203 l~~~ 206 (248)
T 2yvl_A 203 IENY 206 (248)
T ss_dssp STTT
T ss_pred HHhh
Confidence 5544
No 81
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.42 E-value=6.1e-13 Score=126.18 Aligned_cols=121 Identities=17% Similarity=0.159 Sum_probs=99.2
Q ss_pred cceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc
Q 009708 314 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH 393 (528)
Q Consensus 314 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~ 393 (528)
.|.+..+......+...+.+.++.+|||+|||+|..+..+++. .++|+++|+++.+++.++++++.+|+++ +++++
T Consensus 56 ~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~ 131 (210)
T 3lbf_A 56 QGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHN-VSTRH 131 (210)
T ss_dssp TSCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEE
T ss_pred CCCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCc-eEEEE
Confidence 4556666666677778888899999999999999999999987 5799999999999999999999999885 99999
Q ss_pred CccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 394 ADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 394 ~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
+|+...... .++||+|+++..+.. - .+.+.++|||||+|+++...
T Consensus 132 ~d~~~~~~~-~~~~D~i~~~~~~~~------~----------------------~~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 132 GDGWQGWQA-RAPFDAIIVTAAPPE------I----------------------PTALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SCGGGCCGG-GCCEEEEEESSBCSS------C----------------------CTHHHHTEEEEEEEEEEECS
T ss_pred CCcccCCcc-CCCccEEEEccchhh------h----------------------hHHHHHhcccCcEEEEEEcC
Confidence 999875433 368999999855421 1 12467889999999987665
No 82
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.42 E-value=3.5e-13 Score=140.13 Aligned_cols=141 Identities=16% Similarity=0.164 Sum_probs=104.9
Q ss_pred HHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC
Q 009708 324 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS 403 (528)
Q Consensus 324 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~ 403 (528)
+..+..+. ..++.+|||+|||+|+.++.++.. ...++|+|+|+|+.+++.+++|++.+|+.+.++++++|+.++...
T Consensus 207 a~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~-~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~- 283 (373)
T 3tm4_A 207 ANAMIELA-ELDGGSVLDPMCGSGTILIELALR-RYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQY- 283 (373)
T ss_dssp HHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHT-TCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGT-
T ss_pred HHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcc-
Confidence 34444555 778899999999999999999986 334589999999999999999999999966799999999987643
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhh
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLR 483 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~ 483 (528)
.++||+|++|||+.- + ......+..++.++++.+.++| ||.++|.+|+ .+.+...+.+
T Consensus 284 ~~~fD~Ii~npPyg~-----r---------~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~------~~~~~~~~~~ 341 (373)
T 3tm4_A 284 VDSVDFAISNLPYGL-----K---------IGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE------KKAIEEAIAE 341 (373)
T ss_dssp CSCEEEEEEECCCC--------------------CCHHHHHHHHHHHHHHHE--EEEEEEEESC------HHHHHHHHHH
T ss_pred cCCcCEEEECCCCCc-----c---------cCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC------HHHHHHHHHH
Confidence 368999999999831 0 0111224456788899999988 7788888873 2334445544
Q ss_pred CCCceEe
Q 009708 484 HPEFSID 490 (528)
Q Consensus 484 ~~~~~~~ 490 (528)
. +|++.
T Consensus 342 ~-G~~~~ 347 (373)
T 3tm4_A 342 N-GFEII 347 (373)
T ss_dssp T-TEEEE
T ss_pred c-CCEEE
Confidence 3 45543
No 83
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.42 E-value=8e-13 Score=129.17 Aligned_cols=113 Identities=19% Similarity=0.282 Sum_probs=93.0
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEE
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 411 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl 411 (528)
.+.++.+|||+|||+|..+..+++..+ ++|+|+|+|+.+++.+++++...|+.++++++++|+..++. ..++||+|+
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~fD~v~ 119 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF-QNEELDLIW 119 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS-CTTCEEEEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC-CCCCEEEEE
Confidence 567788999999999999999999743 49999999999999999999999998889999999977653 247899999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCc
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDP 470 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~ 470 (528)
+....... + ...+++.+.++|||||+++++++++..
T Consensus 120 ~~~~l~~~-------------~----------~~~~l~~~~~~L~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 120 SEGAIYNI-------------G----------FERGMNEWSKYLKKGGFIAVSEASWFT 155 (257)
T ss_dssp EESCSCCC-------------C----------HHHHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred ecChHhhc-------------C----------HHHHHHHHHHHcCCCcEEEEEEeeccC
Confidence 86443211 1 134689999999999999999876433
No 84
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.42 E-value=1.6e-12 Score=129.97 Aligned_cols=106 Identities=14% Similarity=0.106 Sum_probs=86.9
Q ss_pred hcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCE
Q 009708 330 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 409 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~ 409 (528)
++.+++|++|||+|||+|+.+..++.... +++|+|+|+|+.+++.|++++++.|+ ++++++++|+.+++ .+.||+
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~---d~~FDv 191 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID---GLEFDV 191 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG---GCCCSE
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC---CCCcCE
Confidence 56788999999999999988755444433 57999999999999999999999999 56999999999875 368999
Q ss_pred EEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 410 VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 410 Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
|+++.-. + ...++++++.+.|||||+|++.+
T Consensus 192 V~~~a~~---------~----------------d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 192 LMVAALA---------E----------------PKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp EEECTTC---------S----------------CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEECCCc---------c----------------CHHHHHHHHHHHcCCCcEEEEEc
Confidence 9985321 1 12356999999999999999765
No 85
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.42 E-value=6.7e-13 Score=127.03 Aligned_cols=117 Identities=15% Similarity=0.140 Sum_probs=90.0
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc-CCCCCCEEEE
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-STVKCDKVLL 412 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~-~~~~fD~Vl~ 412 (528)
.++.+|||+|||+|..++.+|+.. +...|+|+|+|+.+++.++++++..|+++ ++++++|+..+... ..+.||.|++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~n-v~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQN-VKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSS-EEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCC-EEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 357799999999999999999874 46799999999999999999999999976 99999999886432 2467999998
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
+.|.- ..+....+.+ + .+..+++.+.++|||||.|++.|-
T Consensus 115 ~~~~p----~~~~~~~~~r--------l--~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 115 NFSDP----WPKKRHEKRR--------L--TYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp ESCCC----CCSGGGGGGS--------T--TSHHHHHHHHHHHTTSCEEEEEES
T ss_pred ECCCC----CcCccccccc--------c--CcHHHHHHHHHHcCCCCEEEEEeC
Confidence 75541 0010000000 0 145679999999999999998763
No 86
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.41 E-value=2.1e-12 Score=123.44 Aligned_cols=107 Identities=19% Similarity=0.215 Sum_probs=82.6
Q ss_pred cCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc--cCCCCCC
Q 009708 331 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCD 408 (528)
Q Consensus 331 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~--~~~~~fD 408 (528)
+.+.+|++|||+|||+|..+..+++..+ .++|+|+|+|+.+++.+.++++.. . ++.++.+|+..... ...++||
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--~-~v~~~~~d~~~~~~~~~~~~~fD 128 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--N-NIIPLLFDASKPWKYSGIVEKVD 128 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--S-SEEEECSCTTCGGGTTTTCCCEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--C-CeEEEEcCCCCchhhccccccee
Confidence 3467899999999999999999999865 689999999999998877777654 3 37888999876421 1236899
Q ss_pred EEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 409 KVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 409 ~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
+|++|.+- + .. ...+++++.++|||||+|+++.
T Consensus 129 ~V~~~~~~---------~--------~~-------~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 129 LIYQDIAQ---------K--------NQ-------IEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEECCCS---------T--------TH-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeccC---------h--------hH-------HHHHHHHHHHHhCCCCEEEEEE
Confidence 99998321 1 01 1234889999999999999873
No 87
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.41 E-value=3.9e-13 Score=131.60 Aligned_cols=122 Identities=16% Similarity=0.096 Sum_probs=91.2
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHc-CCCcEEEEEcCChHHHHHHHHHHHHc---CCCcc--------------------
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCL-SGQGLVYAIDINKGRLRILNETAKLH---QVNSV-------------------- 388 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~-~~~~~v~avD~s~~~l~~~~~n~~~~---g~~~~-------------------- 388 (528)
..++.+|||+|||+|..++.++..+ .+..+|+|+|+|+.+++.+++|+..+ ++.+.
T Consensus 49 ~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (250)
T 1o9g_A 49 GDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAA 128 (250)
T ss_dssp CCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred cCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhh
Confidence 3456799999999999999999863 23468999999999999999999877 65433
Q ss_pred -----EE-------------EEcCcccccccc----CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHH
Q 009708 389 -----IR-------------TIHADLRTFADN----STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDE 446 (528)
Q Consensus 389 -----i~-------------~~~~D~~~~~~~----~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~ 446 (528)
++ ++++|+...... ...+||+|++|||+.....+.+ ......+..
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~-------------~~~~~~~~~ 195 (250)
T 1o9g_A 129 QAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEG-------------QVPGQPVAG 195 (250)
T ss_dssp HHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSS-------------CCCHHHHHH
T ss_pred hhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccc-------------cccccHHHH
Confidence 56 899998875421 2347999999999843222111 011234566
Q ss_pred HHHHHhccCcCCCEEEEEcCC
Q 009708 447 LLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 447 lL~~a~~~LkpGG~LvysTcs 467 (528)
+++.+.++|||||+|+++.++
T Consensus 196 ~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 196 LLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp HHHHHHHHSCTTCEEEEEESS
T ss_pred HHHHHHHhcCCCcEEEEeCcc
Confidence 799999999999999986554
No 88
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.41 E-value=1.2e-12 Score=125.01 Aligned_cols=117 Identities=17% Similarity=0.126 Sum_probs=90.4
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc-CCCCCCEEEE
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-STVKCDKVLL 412 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~-~~~~fD~Vl~ 412 (528)
.++.+|||+|||+|..+..++... +..+++|+|+++.+++.+++|++..|+++ ++++++|+..+... ..++||.|++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGVPN-IKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCSS-EEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCCCC-EEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 457899999999999999999874 36799999999999999999999999865 99999999886532 2467999999
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
++|..-. +....+.+ -.+..+++.+.++|||||.|++.|-
T Consensus 118 ~~~~~~~----~~~~~~~~----------~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 118 NFSDPWP----KKRHEKRR----------LTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp ESCCCCC----SGGGGGGS----------TTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred ECCCCcc----ccchhhhc----------cCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 9774210 00000000 0245679999999999999998753
No 89
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.40 E-value=2.6e-12 Score=129.21 Aligned_cols=127 Identities=13% Similarity=0.110 Sum_probs=98.2
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCC
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 405 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~ 405 (528)
.+...+.+.+|.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.+++++...|+.++++++++|+.++ .+
T Consensus 63 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~ 136 (302)
T 3hem_A 63 LALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF----DE 136 (302)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC----CC
T ss_pred HHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc----CC
Confidence 455667788999999999999999999998753 789999999999999999999999987799999999876 37
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCch
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPE 471 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~ 471 (528)
+||+|++... +..-|+..-.....+ ...+++.+.++|||||++++.+.+....
T Consensus 137 ~fD~v~~~~~------~~~~~d~~~~~~~~~-------~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 189 (302)
T 3hem_A 137 PVDRIVSLGA------FEHFADGAGDAGFER-------YDTFFKKFYNLTPDDGRMLLHTITIPDK 189 (302)
T ss_dssp CCSEEEEESC------GGGTTCCSSCCCTTH-------HHHHHHHHHHSSCTTCEEEEEEEECCCH
T ss_pred CccEEEEcch------HHhcCccccccchhH-------HHHHHHHHHHhcCCCcEEEEEEEeccCc
Confidence 8999997532 222211100000111 2456999999999999999988765543
No 90
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.40 E-value=7.4e-13 Score=130.06 Aligned_cols=122 Identities=13% Similarity=0.096 Sum_probs=96.2
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc--CCCCCCEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STVKCDKV 410 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~--~~~~fD~V 410 (528)
..++.+|||+|||+|..++.++... +..+|+++|+++.+++.+++|++.+|+.+ ++++++|+.++... ..++||+|
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~-v~~~~~d~~~~~~~~~~~~~fD~I 155 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKG-ARALWGRAEVLAREAGHREAYARA 155 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEECCHHHHTTSTTTTTCEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEECcHHHhhcccccCCCceEE
Confidence 3568899999999999999999874 46899999999999999999999999987 99999999887642 24689999
Q ss_pred EEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhh
Q 009708 411 LLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLR 483 (528)
Q Consensus 411 l~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~ 483 (528)
++..-. ++ ..+++.+.++|||||++++..+....+|-+ .+...+..
T Consensus 156 ~s~a~~-------------------~~-------~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~-~~~~~l~~ 201 (249)
T 3g89_A 156 VARAVA-------------------PL-------CVLSELLLPFLEVGGAAVAMKGPRVEEELA-PLPPALER 201 (249)
T ss_dssp EEESSC-------------------CH-------HHHHHHHGGGEEEEEEEEEEECSCCHHHHT-THHHHHHH
T ss_pred EECCcC-------------------CH-------HHHHHHHHHHcCCCeEEEEEeCCCcHHHHH-HHHHHHHH
Confidence 985321 11 346899999999999999887765554433 23344444
No 91
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.40 E-value=2.6e-12 Score=124.11 Aligned_cols=127 Identities=15% Similarity=0.195 Sum_probs=101.4
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
+.+|++|||+|||+|..++.++.. ++..+|+|+|+++.+++.+++|++++|+.++|+++++|+...... ..+||.|++
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~-~~~~D~Ivi 96 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE-ADNIDTITI 96 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc-ccccCEEEE
Confidence 457889999999999999999986 445789999999999999999999999998899999999886542 236999886
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCCceEec
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPEFSIDP 491 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~~ 491 (528)
.|.|- . +-.+||..+...|+++|+||.+.. .+.+.+..+|.++ +|.+..
T Consensus 97 ----aGmGg-------------~-------lI~~IL~~~~~~l~~~~~lIlqp~-----~~~~~lr~~L~~~-Gf~i~~ 145 (230)
T 3lec_A 97 ----CGMGG-------------R-------LIADILNNDIDKLQHVKTLVLQPN-----NREDDLRKWLAAN-DFEIVA 145 (230)
T ss_dssp ----EEECH-------------H-------HHHHHHHHTGGGGTTCCEEEEEES-----SCHHHHHHHHHHT-TEEEEE
T ss_pred ----eCCch-------------H-------HHHHHHHHHHHHhCcCCEEEEECC-----CChHHHHHHHHHC-CCEEEE
Confidence 23332 1 224469999999999999997653 2466788888887 576654
No 92
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.40 E-value=1.7e-12 Score=120.25 Aligned_cols=134 Identities=20% Similarity=0.271 Sum_probs=103.8
Q ss_pred eecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc
Q 009708 319 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 398 (528)
Q Consensus 319 ~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~ 398 (528)
.++.....+...+.+.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++++.+++..+++++++|+..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 17 TAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred ChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH
Confidence 344445566667788889999999999999999998763 79999999999999999999999985569999999877
Q ss_pred ccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHH
Q 009708 399 FADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVE 478 (528)
Q Consensus 399 ~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~ 478 (528)
.... ...||+|+++.+.. ++ ..+++.+.++|+|||++++.+++. ++...+.
T Consensus 94 ~~~~-~~~~D~v~~~~~~~------------------~~-------~~~l~~~~~~l~~gG~l~~~~~~~---~~~~~~~ 144 (192)
T 1l3i_A 94 ALCK-IPDIDIAVVGGSGG------------------EL-------QEILRIIKDKLKPGGRIIVTAILL---ETKFEAM 144 (192)
T ss_dssp HHTT-SCCEEEEEESCCTT------------------CH-------HHHHHHHHHTEEEEEEEEEEECBH---HHHHHHH
T ss_pred hccc-CCCCCEEEECCchH------------------HH-------HHHHHHHHHhcCCCcEEEEEecCc---chHHHHH
Confidence 3222 14799999976641 11 346899999999999999887752 3334455
Q ss_pred HHHhhC
Q 009708 479 AFLLRH 484 (528)
Q Consensus 479 ~~l~~~ 484 (528)
.++.++
T Consensus 145 ~~l~~~ 150 (192)
T 1l3i_A 145 ECLRDL 150 (192)
T ss_dssp HHHHHT
T ss_pred HHHHHC
Confidence 666655
No 93
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.39 E-value=3.8e-12 Score=121.26 Aligned_cols=142 Identities=14% Similarity=0.188 Sum_probs=106.9
Q ss_pred HHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCC
Q 009708 325 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 404 (528)
Q Consensus 325 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~ 404 (528)
..+...+.+.++.+|||+|||+|..+..+++..++..+|+++|+++.+++.+++++...++++ ++++++|+..+.. ..
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~~~-~~ 104 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKN-VEVLKSEENKIPL-PD 104 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEECBTTBCSS-CS
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCc-EEEEecccccCCC-CC
Confidence 345556677889999999999999999999986556799999999999999999999999885 9999999987652 24
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCch---------hhHH
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPE---------ENEE 475 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~---------Ene~ 475 (528)
++||+|++.... ..-++ ...+++.+.++|||||+++++++..... -..+
T Consensus 105 ~~fD~v~~~~~l------~~~~~----------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 162 (219)
T 3dh0_A 105 NTVDFIFMAFTF------HELSE----------------PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEW 162 (219)
T ss_dssp SCEEEEEEESCG------GGCSS----------------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHH
T ss_pred CCeeEEEeehhh------hhcCC----------------HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHH
Confidence 689999975332 11111 1356999999999999999887653321 1234
Q ss_pred HHHHHHhhCCCceEec
Q 009708 476 RVEAFLLRHPEFSIDP 491 (528)
Q Consensus 476 ~v~~~l~~~~~~~~~~ 491 (528)
.+...+++. +|+...
T Consensus 163 ~~~~~l~~~-Gf~~~~ 177 (219)
T 3dh0_A 163 EVGLILEDA-GIRVGR 177 (219)
T ss_dssp HHHHHHHHT-TCEEEE
T ss_pred HHHHHHHHC-CCEEEE
Confidence 555666654 566544
No 94
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.38 E-value=5.9e-12 Score=122.63 Aligned_cols=126 Identities=10% Similarity=0.128 Sum_probs=100.2
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
+.+|++|||+|||+|..++.++.. ++..+|+|+|+++.+++.|++|++++|+.++|+++++|+...... ..+||.|++
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~-~~~~D~Ivi 96 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK-KDAIDTIVI 96 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc-cccccEEEE
Confidence 457889999999999999999986 445689999999999999999999999998899999999876532 135999886
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCCceEe
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPEFSID 490 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~ 490 (528)
.|.|- . +-.++|..+...|+++|+||.+.. .+.+.+..+|.++ +|.+.
T Consensus 97 ----agmGg-------------~-------lI~~IL~~~~~~L~~~~~lIlq~~-----~~~~~lr~~L~~~-Gf~i~ 144 (244)
T 3gnl_A 97 ----AGMGG-------------T-------LIRTILEEGAAKLAGVTKLILQPN-----IAAWQLREWSEQN-NWLIT 144 (244)
T ss_dssp ----EEECH-------------H-------HHHHHHHHTGGGGTTCCEEEEEES-----SCHHHHHHHHHHH-TEEEE
T ss_pred ----eCCch-------------H-------HHHHHHHHHHHHhCCCCEEEEEcC-----CChHHHHHHHHHC-CCEEE
Confidence 23332 1 224469999999999999997653 2566777888776 56654
No 95
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=1.5e-11 Score=113.13 Aligned_cols=135 Identities=15% Similarity=0.282 Sum_probs=102.4
Q ss_pred eecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc
Q 009708 319 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 398 (528)
Q Consensus 319 ~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~ 398 (528)
.++.....+...+...++.+|||+|||+|..+..++. +..+++++|+++.+++.++++++.+|+++ ++++++|+.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~~~~~~d~~~ 94 (183)
T 2yxd_A 19 TKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKN-CQIIKGRAED 94 (183)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCS-EEEEESCHHH
T ss_pred CHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCc-EEEEECCccc
Confidence 3344455666667778889999999999999999987 46799999999999999999999999865 9999999987
Q ss_pred ccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHH
Q 009708 399 FADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVE 478 (528)
Q Consensus 399 ~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~ 478 (528)
... .++||+|+++++. + ...+++.+.++ |||.+++++|... +...+.
T Consensus 95 ~~~--~~~~D~i~~~~~~--------~------------------~~~~l~~~~~~--~gG~l~~~~~~~~---~~~~~~ 141 (183)
T 2yxd_A 95 VLD--KLEFNKAFIGGTK--------N------------------IEKIIEILDKK--KINHIVANTIVLE---NAAKII 141 (183)
T ss_dssp HGG--GCCCSEEEECSCS--------C------------------HHHHHHHHHHT--TCCEEEEEESCHH---HHHHHH
T ss_pred ccc--CCCCcEEEECCcc--------c------------------HHHHHHHHhhC--CCCEEEEEecccc---cHHHHH
Confidence 332 2689999998770 0 12357777777 9999999886532 233455
Q ss_pred HHHhhCCCceEec
Q 009708 479 AFLLRHPEFSIDP 491 (528)
Q Consensus 479 ~~l~~~~~~~~~~ 491 (528)
..++++. +.+..
T Consensus 142 ~~l~~~g-~~~~~ 153 (183)
T 2yxd_A 142 NEFESRG-YNVDA 153 (183)
T ss_dssp HHHHHTT-CEEEE
T ss_pred HHHHHcC-CeEEE
Confidence 6666664 55544
No 96
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.37 E-value=3.6e-13 Score=138.45 Aligned_cols=160 Identities=14% Similarity=0.148 Sum_probs=108.9
Q ss_pred ceeEeecchHHHHHHhc----CCCCCCeEEEeCCccchHHHHHHHHcCCC----cEEEEEcCChHHHHHHHHHHHHcCCC
Q 009708 315 GLCAVQDESAGLVVAVV----DPQPGQSIVDCCAAPGGKTLYMASCLSGQ----GLVYAIDINKGRLRILNETAKLHQVN 386 (528)
Q Consensus 315 G~~~~Qd~~s~l~~~~l----~~~~g~~VLDl~aG~G~kt~~la~~~~~~----~~v~avD~s~~~l~~~~~n~~~~g~~ 386 (528)
|.++..+..+.++..++ .+.++.+|||+|||+|++++.+++.+... .+|+|+|+++.+++.++.|+...|+.
T Consensus 106 g~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~ 185 (344)
T 2f8l_A 106 NHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQK 185 (344)
T ss_dssp GGCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCC
T ss_pred CcCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCC
Confidence 55555554444444433 55677899999999999999999886532 78999999999999999999999883
Q ss_pred ccEEEEcCccccccccCCCCCCEEEEcCCCCCCccccCCchh--hccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 387 SVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADL--RWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 387 ~~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~--~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+.++++|..... ...+||+|++|||++ .+.. ++. +|... ........+..++.++.++|||||++++.
T Consensus 186 --~~i~~~D~l~~~--~~~~fD~Ii~NPPfg---~~~~-~~~~~~~~~~--~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v 255 (344)
T 2f8l_A 186 --MTLLHQDGLANL--LVDPVDVVISDLPVG---YYPD-DENAKTFELC--REEGHSFAHFLFIEQGMRYTKPGGYLFFL 255 (344)
T ss_dssp --CEEEESCTTSCC--CCCCEEEEEEECCCS---EESC-HHHHTTSTTC--CSSSCEEHHHHHHHHHHHTEEEEEEEEEE
T ss_pred --ceEEECCCCCcc--ccCCccEEEECCCCC---CcCc-hhhhhhcccc--CCCCcchHHHHHHHHHHHHhCCCCEEEEE
Confidence 688999987643 236799999999973 2221 111 11100 00001123456799999999999999887
Q ss_pred cCC-CCchhhHHHHHHHHhhC
Q 009708 465 TCS-IDPEENEERVEAFLLRH 484 (528)
Q Consensus 465 Tcs-~~~~Ene~~v~~~l~~~ 484 (528)
+++ +........+..++.++
T Consensus 256 ~p~~~~~~~~~~~ir~~l~~~ 276 (344)
T 2f8l_A 256 VPDAMFGTSDFAKVDKFIKKN 276 (344)
T ss_dssp EEGGGGGSTTHHHHHHHHHHH
T ss_pred ECchhcCCchHHHHHHHHHhC
Confidence 633 33334445566666554
No 97
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.37 E-value=2.6e-12 Score=125.43 Aligned_cols=118 Identities=18% Similarity=0.138 Sum_probs=94.7
Q ss_pred HHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC
Q 009708 324 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS 403 (528)
Q Consensus 324 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~ 403 (528)
...+...+.+.++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.++++++..|+.++++++++|+.+++.
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 100 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-- 100 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC--
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc--
Confidence 3445566778889999999999999999999875 468999999999999999999999987679999999988754
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
.++||+|++... +...++ ...+|+++.++|||||+|++++..
T Consensus 101 ~~~fD~V~~~~~------~~~~~~----------------~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 101 NEKCDVAACVGA------TWIAGG----------------FAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp SSCEEEEEEESC------GGGTSS----------------SHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred CCCCCEEEECCC------hHhcCC----------------HHHHHHHHHHHcCCCeEEEEecCc
Confidence 478999997322 111111 134699999999999999987643
No 98
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.37 E-value=2.3e-12 Score=134.22 Aligned_cols=115 Identities=17% Similarity=0.274 Sum_probs=94.1
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.+++|++.++++ ++++++|+...... .++||+|++|
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~D~~~~~~~-~~~fD~Ii~n 305 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK--AQALHSDVDEALTE-EARFDIIVTN 305 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTSCT-TCCEEEEEEC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEEcchhhcccc-CCCeEEEEEC
Confidence 46789999999999999999986 469999999999999999999999976 78999999886542 3689999999
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCch
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPE 471 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~ 471 (528)
||+...+.. .. .....+++.+.++|||||+++++++...+.
T Consensus 306 pp~~~~~~~----------~~-------~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~ 346 (381)
T 3dmg_A 306 PPFHVGGAV----------IL-------DVAQAFVNVAAARLRPGGVFFLVSNPFLKY 346 (381)
T ss_dssp CCCCTTCSS----------CC-------HHHHHHHHHHHHHEEEEEEEEEEECTTSCH
T ss_pred Cchhhcccc----------cH-------HHHHHHHHHHHHhcCcCcEEEEEEcCCCCh
Confidence 998532211 01 123457999999999999999988876654
No 99
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.37 E-value=4.2e-12 Score=120.30 Aligned_cols=120 Identities=14% Similarity=0.141 Sum_probs=94.7
Q ss_pred HHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCC
Q 009708 325 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 404 (528)
Q Consensus 325 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~ 404 (528)
..+...+...++ +|||+|||+|..+..+++. +..+|+++|+++.+++.++++++..++.++++++++|+.+++. ..
T Consensus 34 ~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~ 109 (219)
T 3dlc_A 34 ENIINRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI-ED 109 (219)
T ss_dssp HHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS-CT
T ss_pred HHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC-Cc
Confidence 344555566666 9999999999999999987 3579999999999999999999999988779999999988652 24
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCc
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDP 470 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~ 470 (528)
++||+|++..... .-+ + ...+|+++.++|||||++++++....+
T Consensus 110 ~~~D~v~~~~~l~------~~~---------~-------~~~~l~~~~~~L~pgG~l~~~~~~~~~ 153 (219)
T 3dlc_A 110 NYADLIVSRGSVF------FWE---------D-------VATAFREIYRILKSGGKTYIGGGFGNK 153 (219)
T ss_dssp TCEEEEEEESCGG------GCS---------C-------HHHHHHHHHHHEEEEEEEEEEECCSSH
T ss_pred ccccEEEECchHh------hcc---------C-------HHHHHHHHHHhCCCCCEEEEEeccCcH
Confidence 6899999865431 111 1 234699999999999999987654444
No 100
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.37 E-value=1.5e-12 Score=127.30 Aligned_cols=139 Identities=17% Similarity=0.212 Sum_probs=98.4
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc--------CCCccEEEEcCccccccc--c
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--------QVNSVIRTIHADLRTFAD--N 402 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~--------g~~~~i~~~~~D~~~~~~--~ 402 (528)
+.++.+|||+|||+|..++.++... +...|+|+|+|+.+++.++++++.+ ++.+ ++++++|+.+... .
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~n-v~~~~~D~~~~l~~~~ 124 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQN-INVLRGNAMKFLPNFF 124 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTT-EEEEECCTTSCGGGTS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCc-EEEEeccHHHHHHHhc
Confidence 3467799999999999999999874 4579999999999999999999887 7775 8999999987433 1
Q ss_pred CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHh
Q 009708 403 STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLL 482 (528)
Q Consensus 403 ~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~ 482 (528)
..+.+|.|+++-|..-. +....+.+. .+..++..+.++|+|||+|++.|- .++..+.+...+.
T Consensus 125 ~~~~~d~v~~~~p~p~~----k~~~~~~r~----------~~~~~l~~~~~~LkpgG~l~~~td---~~~~~~~~~~~~~ 187 (246)
T 2vdv_E 125 EKGQLSKMFFCFPDPHF----KQRKHKARI----------ITNTLLSEYAYVLKEGGVVYTITD---VKDLHEWMVKHLE 187 (246)
T ss_dssp CTTCEEEEEEESCCCC----------CSSC----------CCHHHHHHHHHHEEEEEEEEEEES---CHHHHHHHHHHHH
T ss_pred cccccCEEEEECCCccc----ccchhHHhh----------ccHHHHHHHHHHcCCCCEEEEEec---cHHHHHHHHHHHH
Confidence 24679999876444210 000000000 134679999999999999997653 2333444555666
Q ss_pred hCCCceEe
Q 009708 483 RHPEFSID 490 (528)
Q Consensus 483 ~~~~~~~~ 490 (528)
.++.|+..
T Consensus 188 ~~~~~~~~ 195 (246)
T 2vdv_E 188 EHPLFERL 195 (246)
T ss_dssp HSTTEEEC
T ss_pred hCcCeEec
Confidence 77766554
No 101
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.37 E-value=3.1e-12 Score=129.91 Aligned_cols=117 Identities=13% Similarity=0.164 Sum_probs=95.9
Q ss_pred ecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccc
Q 009708 320 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 399 (528)
Q Consensus 320 Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~ 399 (528)
|......+...+.+.+|++|||+|||+|..+..+++.....++|+++|+++.+++.++++++..|+++ ++++++|+.+.
T Consensus 60 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~ 138 (317)
T 1dl5_A 60 QPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYG 138 (317)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhc
Confidence 44455666777888999999999999999999999885445789999999999999999999999987 99999999875
Q ss_pred cccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 400 ADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 400 ~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
... .++||+|+++++....+ +.+.++|||||+++++..
T Consensus 139 ~~~-~~~fD~Iv~~~~~~~~~----------------------------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 139 VPE-FSPYDVIFVTVGVDEVP----------------------------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CGG-GCCEEEEEECSBBSCCC----------------------------HHHHHHEEEEEEEEEEBC
T ss_pred ccc-CCCeEEEEEcCCHHHHH----------------------------HHHHHhcCCCcEEEEEEC
Confidence 432 36799999998874211 345678999999998743
No 102
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.36 E-value=4.4e-12 Score=124.17 Aligned_cols=85 Identities=9% Similarity=0.127 Sum_probs=70.0
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc-ccccC----CCCCCE
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADNS----TVKCDK 409 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~-~~~~~----~~~fD~ 409 (528)
++.+|||+|||+|..+..++.... ..+|+|+|+|+.+++.+++|++.+++.++++++++|+.+ +.... ..+||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 567999999999999999988753 479999999999999999999999998779999999765 22111 157999
Q ss_pred EEEcCCCCCCc
Q 009708 410 VLLDAPCSGLG 420 (528)
Q Consensus 410 Vl~D~Pcsg~G 420 (528)
|++|||+...+
T Consensus 144 i~~npp~~~~~ 154 (254)
T 2h00_A 144 CMCNPPFFANQ 154 (254)
T ss_dssp EEECCCCC---
T ss_pred EEECCCCccCc
Confidence 99999997654
No 103
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.36 E-value=1.8e-12 Score=122.50 Aligned_cols=124 Identities=19% Similarity=0.192 Sum_probs=98.5
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
+.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.++++++..++.+ ++++++|+.... .++||+|++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~---~~~fD~i~~ 131 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV---DGKFDLIVA 131 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC---CSCEEEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC---CCCceEEEE
Confidence 567889999999999999998874 45699999999999999999999999987 899999997754 368999999
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCCceEec
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPEFSIDP 491 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~~ 491 (528)
+++. .. ...+++.+.++|||||++++++... +..+.+...+.+. +|+...
T Consensus 132 ~~~~------------------~~-------~~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~~-Gf~~~~ 181 (205)
T 3grz_A 132 NILA------------------EI-------LLDLIPQLDSHLNEDGQVIFSGIDY---LQLPKIEQALAEN-SFQIDL 181 (205)
T ss_dssp ESCH------------------HH-------HHHHGGGSGGGEEEEEEEEEEEEEG---GGHHHHHHHHHHT-TEEEEE
T ss_pred CCcH------------------HH-------HHHHHHHHHHhcCCCCEEEEEecCc---ccHHHHHHHHHHc-CCceEE
Confidence 8765 11 2457999999999999999865432 2334455666654 566554
No 104
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.35 E-value=5.8e-13 Score=141.75 Aligned_cols=144 Identities=17% Similarity=0.167 Sum_probs=110.3
Q ss_pred cceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcC------------CCcEEEEEcCChHHHHHHHHHHH
Q 009708 314 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLS------------GQGLVYAIDINKGRLRILNETAK 381 (528)
Q Consensus 314 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~------------~~~~v~avD~s~~~l~~~~~n~~ 381 (528)
.|.|+.....+.+++.++.+.++.+|||.|||+|++++.+++.+. ....++|+|+++.+++.++.|+.
T Consensus 150 ~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 566777777788888899999999999999999999999988652 13579999999999999999999
Q ss_pred HcCCCc-cEEEEcCccccccccCCCCCCEEEEcCCCCCCccccCC---chhhccCCHHHHHHHHHHHHHHHHHHhccCcC
Q 009708 382 LHQVNS-VIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKR---ADLRWNRRLEDMEELKILQDELLDAASLLVKP 457 (528)
Q Consensus 382 ~~g~~~-~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~---pd~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkp 457 (528)
.+|+.. .+.++++|....... .+||+|++|||+++....... .+..+..+ ..+..++.++.++|||
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~~--~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~--------~~~~~fl~~~~~~Lk~ 299 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEPS--TLVDVILANPPFGTRPAGSVDINRPDFYVETK--------NNQLNFLQHMMLMLKT 299 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCCS--SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCS--------CHHHHHHHHHHHHEEE
T ss_pred HhCCCcCCCCEeeCCCCCCccc--CCcCEEEECCCCCCcccccchhhHhhcCCCCc--------chHHHHHHHHHHHhcc
Confidence 999852 367889998775432 489999999999875443211 11111111 1245679999999999
Q ss_pred CCEEEEEcCC
Q 009708 458 GGVLVYSTCS 467 (528)
Q Consensus 458 GG~LvysTcs 467 (528)
||++++.++.
T Consensus 300 gG~~a~V~p~ 309 (445)
T 2okc_A 300 GGRAAVVLPD 309 (445)
T ss_dssp EEEEEEEEEH
T ss_pred CCEEEEEECC
Confidence 9999988764
No 105
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.35 E-value=5.3e-12 Score=119.38 Aligned_cols=126 Identities=21% Similarity=0.270 Sum_probs=93.8
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEE
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 411 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl 411 (528)
.+.++.+|||+|||+|..+..++.. +..+|+|+|+++.+++.+++|++.+++ +++++++|+.+++ .+||+|+
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~----~~~D~v~ 117 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN----SRVDIVI 117 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC----CCCSEEE
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC----CCCCEEE
Confidence 4567889999999999999999875 345899999999999999999999888 3899999998863 4799999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCCceEec
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPEFSIDP 491 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~~ 491 (528)
+|||+... ++.. ...+++.+.+++ || +|+.| +.+.++.+.+..++.++ ++++..
T Consensus 118 ~~~p~~~~---~~~~-----------------~~~~l~~~~~~l--~~--~~~~~-~~~~~~~~~~~~~l~~~-g~~~~~ 171 (207)
T 1wy7_A 118 MNPPFGSQ---RKHA-----------------DRPFLLKAFEIS--DV--VYSIH-LAKPEVRRFIEKFSWEH-GFVVTH 171 (207)
T ss_dssp ECCCCSSS---STTT-----------------THHHHHHHHHHC--SE--EEEEE-ECCHHHHHHHHHHHHHT-TEEEEE
T ss_pred EcCCCccc---cCCc-----------------hHHHHHHHHHhc--Cc--EEEEE-eCCcCCHHHHHHHHHHC-CCeEEE
Confidence 99998421 1111 123477777777 43 55666 33455666677777765 455443
No 106
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.35 E-value=4.9e-12 Score=122.79 Aligned_cols=122 Identities=13% Similarity=0.179 Sum_probs=99.3
Q ss_pred ecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccc
Q 009708 320 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 399 (528)
Q Consensus 320 Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~ 399 (528)
|++++..++..+++.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++++..|+++ ++++++|+..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~ 81 (239)
T 1xxl_A 6 HHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY---VQECIGVDATKEMVEVASSFAQEKGVEN-VRFQQGTAESL 81 (239)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHHTCCS-EEEEECBTTBC
T ss_pred cCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEecccccC
Confidence 6778888889999999999999999999999999876 3599999999999999999999999875 89999999876
Q ss_pred cccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 400 ADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 400 ~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
+. ..++||+|++.... ..-+ + ...+|.++.++|||||+++++++..
T Consensus 82 ~~-~~~~fD~v~~~~~l------~~~~---------~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 82 PF-PDDSFDIITCRYAA------HHFS---------D-------VRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp CS-CTTCEEEEEEESCG------GGCS---------C-------HHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CC-CCCcEEEEEECCch------hhcc---------C-------HHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 42 24689999975322 1111 1 1346899999999999999876543
No 107
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.35 E-value=1.4e-12 Score=119.04 Aligned_cols=107 Identities=18% Similarity=0.162 Sum_probs=83.9
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC---CCCCCEEE
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS---TVKCDKVL 411 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~---~~~fD~Vl 411 (528)
++.+|||+|||+|..+..+++. ...|+++|+|+.+++.+++|++.+++ +++++++|+.+..... .++||+|+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~ 115 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE---GWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAF 115 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT---TCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHC---CCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEE
Confidence 6789999999999999999986 23499999999999999999999988 3899999998753321 24799999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHH--hccCcCCCEEEEEcCCCCc
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA--SLLVKPGGVLVYSTCSIDP 470 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a--~~~LkpGG~LvysTcs~~~ 470 (528)
+|+|+. +. . . ++++.. .++|||||++++++++...
T Consensus 116 ~~~~~~--~~---~---------~----------~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 116 MAPPYA--MD---L---------A----------ALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp ECCCTT--SC---T---------T----------HHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred ECCCCc--hh---H---------H----------HHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 999974 11 0 0 123333 5999999999988776443
No 108
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.34 E-value=2.3e-12 Score=130.39 Aligned_cols=122 Identities=14% Similarity=0.181 Sum_probs=97.4
Q ss_pred ecchHHHHHHhcC-CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc
Q 009708 320 QDESAGLVVAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 398 (528)
Q Consensus 320 Qd~~s~l~~~~l~-~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~ 398 (528)
++.....+...+. +.++.+|||+|||+|..+..+++.. +.+|+|+|+++.+++.++++++..|+.++++++++|+.+
T Consensus 101 ~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 178 (312)
T 3vc1_A 101 ESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLD 178 (312)
T ss_dssp HHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhc
Confidence 3334445666666 7889999999999999999999874 468999999999999999999999998779999999987
Q ss_pred ccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 399 FADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 399 ~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
++. ..++||+|++.-.. .. .. +..+|+.+.++|||||+|++.+..
T Consensus 179 ~~~-~~~~fD~V~~~~~l------~~-------~~----------~~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 179 TPF-DKGAVTASWNNEST------MY-------VD----------LHDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp CCC-CTTCEEEEEEESCG------GG-------SC----------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCC-CCCCEeEEEECCch------hh-------CC----------HHHHHHHHHHHcCCCcEEEEEEcc
Confidence 652 24789999974221 11 01 355799999999999999988754
No 109
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.34 E-value=6e-12 Score=118.36 Aligned_cols=126 Identities=14% Similarity=0.162 Sum_probs=89.0
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCC-CcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc----------
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------- 401 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~-~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~---------- 401 (528)
+.++.+|||+|||+|+++..+++.+++ .++|+|+|+++.. ..++ ++++++|+.....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~-v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPN-VYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTT-CEEEECCTTTTSSCCC-------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCC-ceEEEccccchhhhhhccccccc
Confidence 467889999999999999999998653 5899999999831 2343 7889999877540
Q ss_pred --------------cCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 402 --------------NSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 402 --------------~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
....+||+|++|+++...|. ...+......++..++..+.++|||||.+++.+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~-----------~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGN-----------KIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCSC-----------HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCCCCC-----------cccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 12358999999976643332 01233334456778899999999999999975432
Q ss_pred CCchhhHHHHHHHHhhC
Q 009708 468 IDPEENEERVEAFLLRH 484 (528)
Q Consensus 468 ~~~~Ene~~v~~~l~~~ 484 (528)
.++...+...+..+
T Consensus 157 ---~~~~~~l~~~l~~~ 170 (201)
T 2plw_A 157 ---GSQTNNLKTYLKGM 170 (201)
T ss_dssp ---STTHHHHHHHHHTT
T ss_pred ---CCCHHHHHHHHHHH
Confidence 23334455566553
No 110
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.33 E-value=6.5e-12 Score=119.48 Aligned_cols=116 Identities=16% Similarity=0.179 Sum_probs=90.2
Q ss_pred hHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc
Q 009708 323 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 402 (528)
Q Consensus 323 ~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~ 402 (528)
-..++...+...++.+|||+|||+|..+..+++. ..+|+|+|+++.+++.+++++...+ +++++++|+.++.
T Consensus 39 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~-- 110 (216)
T 3ofk_A 39 HTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFS-- 110 (216)
T ss_dssp HHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCC--
T ss_pred HHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCC--
Confidence 3445565667778889999999999999999876 3689999999999999999887654 4899999998876
Q ss_pred CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 403 STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 403 ~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
..++||+|++.... ..-+ ++..+ ..+|..+.++|||||++++++
T Consensus 111 ~~~~fD~v~~~~~l------~~~~------~~~~~-------~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 111 TAELFDLIVVAEVL------YYLE------DMTQM-------RTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp CSCCEEEEEEESCG------GGSS------SHHHH-------HHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCccEEEEccHH------HhCC------CHHHH-------HHHHHHHHHHcCCCCEEEEEe
Confidence 34789999985222 2211 12222 346999999999999999876
No 111
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=5.5e-12 Score=120.02 Aligned_cols=124 Identities=16% Similarity=0.177 Sum_probs=97.2
Q ss_pred cceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc
Q 009708 314 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH 393 (528)
Q Consensus 314 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~ 393 (528)
.|....+......+...+.+.++.+|||+|||+|..+..++...++.++|+++|+++.+++.+++++...|+++ +++++
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~ 134 (215)
T 2yxe_A 56 YGQTISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDN-VIVIV 134 (215)
T ss_dssp TTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEE
T ss_pred CCcEeCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEE
Confidence 34444444455566677788889999999999999999999986445799999999999999999999999886 89999
Q ss_pred CccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 394 ADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 394 ~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
+|+..... ...+||+|+++.+... +.+.+.++|||||+|++++.+
T Consensus 135 ~d~~~~~~-~~~~fD~v~~~~~~~~----------------------------~~~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 135 GDGTLGYE-PLAPYDRIYTTAAGPK----------------------------IPEPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp SCGGGCCG-GGCCEEEEEESSBBSS----------------------------CCHHHHHTEEEEEEEEEEESS
T ss_pred CCcccCCC-CCCCeeEEEECCchHH----------------------------HHHHHHHHcCCCcEEEEEECC
Confidence 99865332 1367999998766521 013678899999999977644
No 112
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.33 E-value=4.1e-12 Score=123.65 Aligned_cols=139 Identities=15% Similarity=0.200 Sum_probs=96.6
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHH------cCCCccEEEEcCcccc-ccc-cCCC
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL------HQVNSVIRTIHADLRT-FAD-NSTV 405 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~------~g~~~~i~~~~~D~~~-~~~-~~~~ 405 (528)
.++.+|||+|||+|..+..+|... +...|+|+|+++.+++.++++++. .++.| +.++++|+.. +.. ...+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~n-v~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQN-IACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTT-EEEEECCTTTCHHHHCCTT
T ss_pred CCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCe-EEEEECcHHHhhhhhCCCc
Confidence 456789999999999999999864 467999999999999999998875 45665 9999999987 332 1246
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCC
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHP 485 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~ 485 (528)
.||.|++..|.- |........+ -.+..+|+.+.++|||||.|++.|+. .+..+.+...+..++
T Consensus 123 ~~D~v~~~~~dp------------~~k~~h~krr--~~~~~~l~~~~~~LkpGG~l~~~td~---~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 123 QLTKMFFLFPDP------------HFKRTKHKWR--IISPTLLAEYAYVLRVGGLVYTITDV---LELHDWMCTHFEEHP 185 (235)
T ss_dssp CEEEEEEESCC-------------------------CCCHHHHHHHHHHEEEEEEEEEEESC---HHHHHHHHHHHHTST
T ss_pred CeeEEEEeCCCc------------hhhhhhhhhh--hhhHHHHHHHHHHCCCCCEEEEEeCC---HHHHHHHHHHHHHCC
Confidence 899999865431 1000000000 01345799999999999999988764 222233445567788
Q ss_pred CceEec
Q 009708 486 EFSIDP 491 (528)
Q Consensus 486 ~~~~~~ 491 (528)
.|+...
T Consensus 186 ~f~~~~ 191 (235)
T 3ckk_A 186 LFERVP 191 (235)
T ss_dssp TEEEEC
T ss_pred CccccC
Confidence 777653
No 113
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.33 E-value=5.6e-12 Score=126.81 Aligned_cols=135 Identities=12% Similarity=0.199 Sum_probs=92.4
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcC---C-CccEEEEcCccccccccCCCCCCEE
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ---V-NSVIRTIHADLRTFADNSTVKCDKV 410 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g---~-~~~i~~~~~D~~~~~~~~~~~fD~V 410 (528)
++.+|||+|||+|+.+..+++. .+..+|++||+|+.+++.+++++...+ + +.+++++++|+..+.....++||+|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTC-TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 4569999999999999999875 346799999999999999999987653 2 2368999999988765445789999
Q ss_pred EEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC--CchhhHHHHHHHHhhCCCce
Q 009708 411 LLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI--DPEENEERVEAFLLRHPEFS 488 (528)
Q Consensus 411 l~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~--~~~Ene~~v~~~l~~~~~~~ 488 (528)
++|++... |. . .. -...++++.+.+.|+|||+|+..+++. .++.-...+..+-+.++...
T Consensus 162 i~D~~~p~-~~-----~-------~~-----l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~ 223 (294)
T 3adn_A 162 ISDCTDPI-GP-----G-------ES-----LFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVG 223 (294)
T ss_dssp EECC----------------------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEE
T ss_pred EECCCCcc-Cc-----c-------hh-----ccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeE
Confidence 99987521 11 0 00 012457899999999999999876553 23333334444333445433
No 114
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.33 E-value=6.3e-12 Score=123.31 Aligned_cols=130 Identities=11% Similarity=0.137 Sum_probs=95.4
Q ss_pred cccccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccE
Q 009708 310 GLLKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVI 389 (528)
Q Consensus 310 ~~~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i 389 (528)
..|.......|......+...+.+.++.+|||+|||+|..+..+++. ..+|+++|+|+.+++.++++++..|+++ +
T Consensus 12 ~~~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~-v 87 (260)
T 1vl5_A 12 HMYVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPF---VKKVVAFDLTEDILKVARAFIEGNGHQQ-V 87 (260)
T ss_dssp -----------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCCS-E
T ss_pred eeeecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHhcCCCc-e
Confidence 44556666677777777788888888999999999999999999876 2599999999999999999999999875 8
Q ss_pred EEEcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 390 RTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 390 ~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
+++++|+..++. ..++||+|++.... ..-+ + ...+|.++.++|||||+|++++.
T Consensus 88 ~~~~~d~~~l~~-~~~~fD~V~~~~~l------~~~~------d----------~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 88 EYVQGDAEQMPF-TDERFHIVTCRIAA------HHFP------N----------PASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp EEEECCC-CCCS-CTTCEEEEEEESCG------GGCS------C----------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEecHHhCCC-CCCCEEEEEEhhhh------HhcC------C----------HHHHHHHHHHHcCCCCEEEEEEc
Confidence 999999987652 24689999975322 1111 1 12469999999999999998643
No 115
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.33 E-value=3.8e-12 Score=122.26 Aligned_cols=111 Identities=19% Similarity=0.243 Sum_probs=89.5
Q ss_pred HHHHHhc--CCCCCCeEEEeCCccchHHHHHHHHcC----CCcEEEEEcCChHHHHHHHHHHHHcC-----CCccEEEEc
Q 009708 325 GLVVAVV--DPQPGQSIVDCCAAPGGKTLYMASCLS----GQGLVYAIDINKGRLRILNETAKLHQ-----VNSVIRTIH 393 (528)
Q Consensus 325 ~l~~~~l--~~~~g~~VLDl~aG~G~kt~~la~~~~----~~~~v~avD~s~~~l~~~~~n~~~~g-----~~~~i~~~~ 393 (528)
..+...+ .+.++.+|||+|||+|..+..+++... +.++|+++|+++.+++.++++++..+ .. ++++++
T Consensus 68 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~-~v~~~~ 146 (227)
T 2pbf_A 68 ALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKID-NFKIIH 146 (227)
T ss_dssp HHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSST-TEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccC-CEEEEE
Confidence 3444555 477899999999999999999999864 45799999999999999999999988 44 489999
Q ss_pred Ccccccc----ccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 394 ADLRTFA----DNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 394 ~D~~~~~----~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
+|+.... .. ..+||+|+++.++.. +++.+.++|||||+|+++.
T Consensus 147 ~d~~~~~~~~~~~-~~~fD~I~~~~~~~~----------------------------~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 147 KNIYQVNEEEKKE-LGLFDAIHVGASASE----------------------------LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp CCGGGCCHHHHHH-HCCEEEEEECSBBSS----------------------------CCHHHHHHEEEEEEEEEEE
T ss_pred CChHhcccccCcc-CCCcCEEEECCchHH----------------------------HHHHHHHhcCCCcEEEEEE
Confidence 9998743 21 367999999887731 2566788999999998654
No 116
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.32 E-value=4e-12 Score=123.18 Aligned_cols=124 Identities=15% Similarity=0.218 Sum_probs=97.6
Q ss_pred cccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEE
Q 009708 312 LKEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRT 391 (528)
Q Consensus 312 ~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~ 391 (528)
+..|....+......+...+.+.++.+|||+|||+|..+..+++..+ ++|+++|+++.+++.++++++..|+.+ +++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~ 144 (235)
T 1jg1_A 68 IPAGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKN-VHV 144 (235)
T ss_dssp CSTTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCS-EEE
T ss_pred cCCCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCC-cEE
Confidence 34566666666666777778888999999999999999999998753 789999999999999999999999987 899
Q ss_pred EcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 392 IHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 392 ~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
+.+|+..... ...+||+|+++.+... +.+.+.+.|||||+|++++-.
T Consensus 145 ~~~d~~~~~~-~~~~fD~Ii~~~~~~~----------------------------~~~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 145 ILGDGSKGFP-PKAPYDVIIVTAGAPK----------------------------IPEPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp EESCGGGCCG-GGCCEEEEEECSBBSS----------------------------CCHHHHHTEEEEEEEEEEECS
T ss_pred EECCcccCCC-CCCCccEEEECCcHHH----------------------------HHHHHHHhcCCCcEEEEEEec
Confidence 9999732221 1245999998766521 123567889999999987643
No 117
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.32 E-value=1.1e-11 Score=115.81 Aligned_cols=115 Identities=18% Similarity=0.177 Sum_probs=91.1
Q ss_pred HHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCC
Q 009708 325 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 404 (528)
Q Consensus 325 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~ 404 (528)
..+...+...++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.++++++..++++ ++++++|+..+.. .
T Consensus 22 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~~~--~ 95 (199)
T 2xvm_A 22 SEVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDN-LHTRVVDLNNLTF--D 95 (199)
T ss_dssp HHHHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEECCGGGCCC--C
T ss_pred HHHHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCC-cEEEEcchhhCCC--C
Confidence 34555666667889999999999999999986 4699999999999999999999998865 8999999988654 4
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
++||+|++..... .. ...+. ..+++.+.++|||||++++.+
T Consensus 96 ~~~D~v~~~~~l~------~~-------~~~~~-------~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 96 RQYDFILSTVVLM------FL-------EAKTI-------PGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp CCEEEEEEESCGG------GS-------CGGGH-------HHHHHHHHHTEEEEEEEEEEE
T ss_pred CCceEEEEcchhh------hC-------CHHHH-------HHHHHHHHHhcCCCeEEEEEE
Confidence 7899999764331 11 11222 346999999999999987654
No 118
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.32 E-value=3.5e-12 Score=130.99 Aligned_cols=128 Identities=15% Similarity=0.173 Sum_probs=101.8
Q ss_pred cchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc
Q 009708 321 DESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA 400 (528)
Q Consensus 321 d~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~ 400 (528)
|..+.++...+.+.++.+|||+|||+|..+..+++. .+..+|+++|+|+.+++.++++++.+++. ++++.+|+....
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~-~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~ 258 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARH-SPKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV 258 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHH-CTTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc
Confidence 445777777777667789999999999999999987 34569999999999999999999999886 467888987654
Q ss_pred ccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCch
Q 009708 401 DNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPE 471 (528)
Q Consensus 401 ~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~ 471 (528)
.++||+|++++|.. .|. .........+++.+.++|||||.+++.+....+.
T Consensus 259 ---~~~fD~Iv~~~~~~-~g~----------------~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 309 (343)
T 2pjd_A 259 ---KGRFDMIISNPPFH-DGM----------------QTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPY 309 (343)
T ss_dssp ---CSCEEEEEECCCCC-SSS----------------HHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSH
T ss_pred ---cCCeeEEEECCCcc-cCc----------------cCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCc
Confidence 36899999999973 111 0011234567999999999999999988876654
No 119
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.32 E-value=4.6e-12 Score=121.82 Aligned_cols=106 Identities=21% Similarity=0.263 Sum_probs=85.8
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc--cCCCCCCEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCDKV 410 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~--~~~~~fD~V 410 (528)
+.++++|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++.. + +++++++|+..... ....+||+|
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~-~v~~~~~d~~~~~~~~~~~~~~D~v 147 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--R-NIVPILGDATKPEEYRALVPKVDVI 147 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--T-TEEEEECCTTCGGGGTTTCCCEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--C-CCEEEEccCCCcchhhcccCCceEE
Confidence 678899999999999999999988765689999999999999999998765 3 48999999987431 123579999
Q ss_pred EEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 411 LLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 411 l~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
++|+|. ++ ....++.++.++|||||+++++.
T Consensus 148 ~~~~~~---------~~---------------~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 148 FEDVAQ---------PT---------------QAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EECCCS---------TT---------------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCCC---------Hh---------------HHHHHHHHHHHhcCCCCEEEEEE
Confidence 999872 10 11234888999999999999863
No 120
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.32 E-value=1.9e-12 Score=129.37 Aligned_cols=128 Identities=12% Similarity=0.112 Sum_probs=93.1
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc--CC--------CccEEEEcCccccccccC
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV--------NSVIRTIHADLRTFADNS 403 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~--g~--------~~~i~~~~~D~~~~~~~~ 403 (528)
..+.+|||+|||+|+.+..+++. +..+|+++|+++.+++.+++++ .. ++ ..+++++++|+..+...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-
Confidence 34679999999999999999886 4679999999999999999998 44 33 34699999999876543
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC-chhhHHHHHHHHh
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID-PEENEERVEAFLL 482 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~-~~Ene~~v~~~l~ 482 (528)
.++||+|++|+|+. .|. + ..+ .+.++++.+.++|+|||++++.+++.. ..+.-..+...+.
T Consensus 150 ~~~fD~Ii~d~~~~-~~~----~--------~~l-----~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~ 211 (281)
T 1mjf_A 150 NRGFDVIIADSTDP-VGP----A--------KVL-----FSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMK 211 (281)
T ss_dssp CCCEEEEEEECCCC-C-----------------T-----TSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHH
T ss_pred cCCeeEEEECCCCC-CCc----c--------hhh-----hHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHH
Confidence 47899999999862 111 0 000 124578899999999999998876643 2233333444454
Q ss_pred h
Q 009708 483 R 483 (528)
Q Consensus 483 ~ 483 (528)
+
T Consensus 212 ~ 212 (281)
T 1mjf_A 212 K 212 (281)
T ss_dssp H
T ss_pred H
Confidence 3
No 121
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.31 E-value=2e-11 Score=127.11 Aligned_cols=139 Identities=17% Similarity=0.157 Sum_probs=99.0
Q ss_pred cccccceeEeecc------hHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCC------------------------
Q 009708 310 GLLKEGLCAVQDE------SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG------------------------ 359 (528)
Q Consensus 310 ~~~~~G~~~~Qd~------~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~------------------------ 359 (528)
.+++.|+-..|.. -+..++.+....++..|||.|||+|++.+.+|....+
T Consensus 163 ~LhkRgyr~~~~~Apl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~ 242 (384)
T 3ldg_A 163 SLFKRGYRTEKGGAPIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTR 242 (384)
T ss_dssp CTTCCSCCCC---CCCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHH
T ss_pred cccccCcccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHH
Confidence 4456666544422 2344455667788999999999999999998876432
Q ss_pred -------------CcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcCCCCCCccccCCc
Q 009708 360 -------------QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRA 426 (528)
Q Consensus 360 -------------~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~p 426 (528)
..+|+|+|+|+.+++.+++|++.+|+.+.++++++|+.++... ..||+|++|||+.- .+
T Consensus 243 ~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~--~~fD~Iv~NPPYG~-rl----- 314 (384)
T 3ldg_A 243 VRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN--KINGVLISNPPYGE-RL----- 314 (384)
T ss_dssp HHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC--CCSCEEEECCCCTT-TT-----
T ss_pred HHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc--CCcCEEEECCchhh-cc-----
Confidence 1469999999999999999999999988899999999987643 58999999999931 11
Q ss_pred hhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 427 DLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 427 d~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
.+...+..++..+.+... . -+||.+++.|-
T Consensus 315 --------~~~~~l~~ly~~lg~~lk-~-~~g~~~~iit~ 344 (384)
T 3ldg_A 315 --------LDDKAVDILYNEMGETFA-P-LKTWSQFILTN 344 (384)
T ss_dssp --------SCHHHHHHHHHHHHHHHT-T-CTTSEEEEEES
T ss_pred --------CCHHHHHHHHHHHHHHHh-h-CCCcEEEEEEC
Confidence 111233344555444433 3 46998887654
No 122
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.31 E-value=1.9e-12 Score=125.96 Aligned_cols=112 Identities=17% Similarity=0.160 Sum_probs=87.0
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC-CCCCCEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-TVKCDKVL 411 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~-~~~fD~Vl 411 (528)
..+|.+|||+|||+|..+.++++. ...+|++||+|+.+++.++++++..+.. +.++.+|+....... .++||.|+
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~--~~~~v~~id~~~~~~~~a~~~~~~~~~~--~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQTHK--VIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTS--CEEEEEEEECCHHHHHHHHHHGGGCSSE--EEEEESCHHHHGGGSCTTCEEEEE
T ss_pred ccCCCeEEEECCCccHHHHHHHHh--CCcEEEEEeCCHHHHHHHHHHHhhCCCc--eEEEeehHHhhcccccccCCceEE
Confidence 357889999999999999999875 2358999999999999999999887753 788899987754332 56899999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
.|+..+..... +. .....+++++.++|||||+|+|.+
T Consensus 134 ~D~~~~~~~~~-~~----------------~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 134 YDTYPLSEETW-HT----------------HQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ECCCCCBGGGT-TT----------------HHHHHHHHTHHHHEEEEEEEEECC
T ss_pred Eeeeecccchh-hh----------------cchhhhhhhhhheeCCCCEEEEEe
Confidence 99876433221 11 123456899999999999999854
No 123
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.31 E-value=1.9e-12 Score=130.52 Aligned_cols=131 Identities=13% Similarity=0.080 Sum_probs=95.0
Q ss_pred eEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcc
Q 009708 317 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 396 (528)
Q Consensus 317 ~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~ 396 (528)
|.+++.....++..+.+.++++|||+|||+|..|..+++. .++|+|+|+++.+++.++++++..++++ ++++++|+
T Consensus 24 fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~-v~~~~~D~ 99 (299)
T 2h1r_A 24 LLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNN-LEVYEGDA 99 (299)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCC-EEC----C
T ss_pred eecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEECch
Confidence 4455666777778888889999999999999999999875 4699999999999999999999888864 89999999
Q ss_pred ccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHH--------HHHHhccCcCCCEEEEEcCCC
Q 009708 397 RTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDEL--------LDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 397 ~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~l--------L~~a~~~LkpGG~LvysTcs~ 468 (528)
..+.. .+||.|++|+|+.... ..+..+.+.+..+ .+.+.++++++|...|+|||.
T Consensus 100 ~~~~~---~~~D~Vv~n~py~~~~--------------~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~~~y~~ls~ 162 (299)
T 2h1r_A 100 IKTVF---PKFDVCTANIPYKISS--------------PLIFKLISHRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTI 162 (299)
T ss_dssp CSSCC---CCCSEEEEECCGGGHH--------------HHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTSTTCCHHHH
T ss_pred hhCCc---ccCCEEEEcCCccccc--------------HHHHHHHhcCCccceeeehHHHHHHHHHhcCCCCcchhHHHH
Confidence 87653 4799999999985311 1111111100000 145778899999888887764
No 124
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.31 E-value=1.2e-11 Score=121.86 Aligned_cols=119 Identities=17% Similarity=0.232 Sum_probs=95.5
Q ss_pred HHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC
Q 009708 324 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS 403 (528)
Q Consensus 324 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~ 403 (528)
...+...+.+.++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.+++++...|+.++++++++|+..++. .
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~ 126 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF-E 126 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-C
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC-C
Confidence 3445566777889999999999999999999864 479999999999999999999999988779999999987642 2
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
.++||+|++.... ..-++ ...+|+.+.++|||||++++++..
T Consensus 127 ~~~fD~v~~~~~l------~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 127 DASFDAVWALESL------HHMPD----------------RGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp TTCEEEEEEESCT------TTSSC----------------HHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred CCCccEEEEechh------hhCCC----------------HHHHHHHHHHHcCCCeEEEEEEee
Confidence 4689999974332 22111 134699999999999999988754
No 125
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.31 E-value=8.5e-12 Score=120.58 Aligned_cols=107 Identities=23% Similarity=0.271 Sum_probs=86.1
Q ss_pred cCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc--ccCCCCCC
Q 009708 331 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA--DNSTVKCD 408 (528)
Q Consensus 331 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~--~~~~~~fD 408 (528)
+.+.++.+|||+|||+|..+..+++..++.++|+|+|+++.+++.+.++++.. . +++++++|+.... +...++||
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~-~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--T-NIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--T-TEEEECSCTTCGGGGGGGCCCEE
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--C-CeEEEEcccCChhhhcccCCcEE
Confidence 44678999999999999999999998755689999999999999998888876 3 4899999998743 12246899
Q ss_pred EEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 409 KVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 409 ~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+|++|+|. ++ ....++.++.++|||||+++++
T Consensus 150 ~V~~~~~~---------~~---------------~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 150 VIFADVAQ---------PD---------------QTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp EEEECCCC---------TT---------------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcCCC---------cc---------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 99999872 11 1133578899999999999974
No 126
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.31 E-value=1.2e-11 Score=128.20 Aligned_cols=117 Identities=14% Similarity=0.112 Sum_probs=89.4
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHH-------HHcCCC-ccEEEEcCccc
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETA-------KLHQVN-SVIRTIHADLR 397 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~-------~~~g~~-~~i~~~~~D~~ 397 (528)
.+...+.+.+|++|||+|||+|..++.+|... +..+|+|||+++.+++.+++++ +.+|+. .+|+++++|+.
T Consensus 164 ~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~ 242 (438)
T 3uwp_A 164 QMIDEIKMTDDDLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL 242 (438)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTT
T ss_pred HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECccc
Confidence 34556788999999999999999999999864 3457999999999999998865 445763 46999999998
Q ss_pred cccccC-CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 398 TFADNS-TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 398 ~~~~~~-~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
+++... ...||+|++++++.. | +. ...|.+.++.|||||+||.+..
T Consensus 243 ~lp~~d~~~~aDVVf~Nn~~F~-------p---------dl-------~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 243 SEEWRERIANTSVIFVNNFAFG-------P---------EV-------DHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp SHHHHHHHHTCSEEEECCTTCC-------H---------HH-------HHHHHHHHTTSCTTCEEEESSC
T ss_pred CCccccccCCccEEEEcccccC-------c---------hH-------HHHHHHHHHcCCCCcEEEEeec
Confidence 865321 136999999988721 1 22 1236677899999999996543
No 127
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.30 E-value=1.6e-11 Score=124.26 Aligned_cols=119 Identities=13% Similarity=0.148 Sum_probs=95.1
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCC
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 405 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~ 405 (528)
.+...+.+.++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.+++++...|+.++++++++|+.+++ +
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~ 154 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA----E 154 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC----C
T ss_pred HHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC----C
Confidence 44555677889999999999999999999875 35999999999999999999999998777999999997763 6
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCc
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDP 470 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~ 470 (528)
+||+|++.... ..-+ ..+ ...+++.+.++|||||++++.+.....
T Consensus 155 ~fD~v~~~~~l------~~~~-------~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 155 PVDRIVSIEAF------EHFG-------HEN-------YDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp CCSEEEEESCG------GGTC-------GGG-------HHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred CcCEEEEeChH------HhcC-------HHH-------HHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 79999975322 1111 011 244699999999999999988876544
No 128
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.30 E-value=3.3e-12 Score=138.95 Aligned_cols=162 Identities=12% Similarity=0.100 Sum_probs=115.4
Q ss_pred cceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCC-----------------cEEEEEcCChHHHHHH
Q 009708 314 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQ-----------------GLVYAIDINKGRLRIL 376 (528)
Q Consensus 314 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~-----------------~~v~avD~s~~~l~~~ 376 (528)
.|.|+..+..+.+++.++.+.++.+|||.|||+|++.+.++..+... ..++|+|+++.++..+
T Consensus 148 ~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp --CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 57788878888888999999999999999999999999998875321 3799999999999999
Q ss_pred HHHHHHcCCCc----cEEEEcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHh
Q 009708 377 NETAKLHQVNS----VIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAAS 452 (528)
Q Consensus 377 ~~n~~~~g~~~----~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~ 452 (528)
+.|+...|+.+ .+.++++|..........+||+|++|||+++........+.....+ ..+..++.+++
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~--------~~~~~Fl~~~l 299 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTS--------NKQLCFMQHII 299 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCS--------CHHHHHHHHHH
T ss_pred HHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCC--------chHHHHHHHHH
Confidence 99999998874 2567899987654323367999999999976543221111111001 12335799999
Q ss_pred ccCcCCCEEEEEcCC--CCchhhHHHHHHHHhh
Q 009708 453 LLVKPGGVLVYSTCS--IDPEENEERVEAFLLR 483 (528)
Q Consensus 453 ~~LkpGG~LvysTcs--~~~~Ene~~v~~~l~~ 483 (528)
++|||||++++.+.. +........+..+|.+
T Consensus 300 ~~Lk~gGr~a~V~p~~~L~~~~~~~~iR~~L~~ 332 (541)
T 2ar0_A 300 ETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMD 332 (541)
T ss_dssp HHEEEEEEEEEEEEHHHHHCCTHHHHHHHHHHH
T ss_pred HHhCCCCEEEEEecCcceecCcHHHHHHHHHhh
Confidence 999999998877543 2222223445555544
No 129
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.30 E-value=5.5e-12 Score=132.59 Aligned_cols=155 Identities=21% Similarity=0.217 Sum_probs=107.2
Q ss_pred cceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc
Q 009708 314 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH 393 (528)
Q Consensus 314 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~ 393 (528)
.|.|+..+..+..++..+...++.+|||+|||+|++++.+++.+....+|+|+|+++.+++.+ .++++++
T Consensus 18 ~g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~ 87 (421)
T 2ih2_A 18 LGRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGIL 87 (421)
T ss_dssp ---CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEE
T ss_pred CceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEe
Confidence 567777777778888888766677999999999999999998764467999999999998766 2488999
Q ss_pred CccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHH----------HHHHHHHHHHHhccCcCCCEEEE
Q 009708 394 ADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEEL----------KILQDELLDAASLLVKPGGVLVY 463 (528)
Q Consensus 394 ~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l----------~~~q~~lL~~a~~~LkpGG~Lvy 463 (528)
+|+..... .++||+|++|||+...+...+.. ..........+ ...+..++..+.++|+|||++++
T Consensus 88 ~D~~~~~~--~~~fD~Ii~NPPy~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~ 162 (421)
T 2ih2_A 88 ADFLLWEP--GEAFDLILGNPPYGIVGEASKYP---IHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVF 162 (421)
T ss_dssp SCGGGCCC--SSCEEEEEECCCCCCBSCTTTCS---BCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CChhhcCc--cCCCCEEEECcCccCcccccccc---cccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEE
Confidence 99987653 36899999999997654421100 00001111111 12456789999999999999998
Q ss_pred EcCCC--CchhhHHHHHHHHhhC
Q 009708 464 STCSI--DPEENEERVEAFLLRH 484 (528)
Q Consensus 464 sTcs~--~~~Ene~~v~~~l~~~ 484 (528)
.++.- .....+ .+..++.++
T Consensus 163 i~p~~~l~~~~~~-~lr~~l~~~ 184 (421)
T 2ih2_A 163 VVPATWLVLEDFA-LLREFLARE 184 (421)
T ss_dssp EEEGGGGTCGGGH-HHHHHHHHH
T ss_pred EEChHHhcCccHH-HHHHHHHhc
Confidence 87652 222333 445555443
No 130
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.30 E-value=1.7e-11 Score=116.89 Aligned_cols=120 Identities=14% Similarity=0.088 Sum_probs=90.4
Q ss_pred HHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCc----cEEEEcCcccccc
Q 009708 325 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS----VIRTIHADLRTFA 400 (528)
Q Consensus 325 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~----~i~~~~~D~~~~~ 400 (528)
..+...+...++.+|||+|||+|..+..+++. .+..+|+|+|+|+.+++.++++++..++.. +++++++|+....
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 19 NGVVAALKQSNARRVIDLGCGQGNLLKILLKD-SFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHHC-TTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhh-CCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc
Confidence 34445555567889999999999999999985 334699999999999999999999888764 5999999986543
Q ss_pred ccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 401 DNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 401 ~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
. ..++||+|++.... .. ....+ ...+++.+.++|||||.++...+
T Consensus 98 ~-~~~~fD~v~~~~~l------~~-------~~~~~-------~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 98 K-RFHGYDAATVIEVI------EH-------LDLSR-------LGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp G-GGCSCSEEEEESCG------GG-------CCHHH-------HHHHHHHHHTTTCCSEEEEEEEB
T ss_pred c-cCCCcCEEeeHHHH------Hc-------CCHHH-------HHHHHHHHHHHcCCCEEEEEccC
Confidence 2 23689999974322 11 11122 24569999999999998876655
No 131
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.29 E-value=3.6e-11 Score=125.45 Aligned_cols=139 Identities=22% Similarity=0.217 Sum_probs=101.1
Q ss_pred cccccceeEeecch------HHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCC------------------------
Q 009708 310 GLLKEGLCAVQDES------AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG------------------------ 359 (528)
Q Consensus 310 ~~~~~G~~~~Qd~~------s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~------------------------ 359 (528)
.+++.|+...|..+ +..++.+....++..|||+|||+|++++.+|....+
T Consensus 164 ~l~krgyr~~~~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~ 243 (385)
T 3ldu_A 164 ALHKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWD 243 (385)
T ss_dssp CTTCCSCCCC--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHH
T ss_pred hhhhcccccCCCCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHH
Confidence 45667776555322 334455667788899999999999999999876422
Q ss_pred -------------CcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcCCCCCCccccCCc
Q 009708 360 -------------QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRA 426 (528)
Q Consensus 360 -------------~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~p 426 (528)
..+|+|+|+++.+++.+++|++.+|+.+.+++.++|+.++.. +.+||+|++|||+.-
T Consensus 244 ~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~--~~~~D~Iv~NPPyg~-------- 313 (385)
T 3ldu_A 244 VRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS--EDEFGFIITNPPYGE-------- 313 (385)
T ss_dssp HHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC--SCBSCEEEECCCCCC--------
T ss_pred HHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc--CCCCcEEEECCCCcC--------
Confidence 157999999999999999999999998779999999998764 357999999999831
Q ss_pred hhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 427 DLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 427 d~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
...+...+..++..+-+.... -+||.+++.|.
T Consensus 314 ------rl~~~~~l~~ly~~lg~~lk~--~~g~~~~iit~ 345 (385)
T 3ldu_A 314 ------RLEDKDSVKQLYKELGYAFRK--LKNWSYYLITS 345 (385)
T ss_dssp ------SHHHHHHHHHHHHHHHHHHHT--SBSCEEEEEES
T ss_pred ------ccCCHHHHHHHHHHHHHHHhh--CCCCEEEEEEC
Confidence 112334455555554444333 45888877664
No 132
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.29 E-value=4.9e-12 Score=121.77 Aligned_cols=122 Identities=12% Similarity=0.151 Sum_probs=93.3
Q ss_pred ceeEeecchHHHHHHhc--CCCCCCeEEEeCCccchHHHHHHHHcCC-----CcEEEEEcCChHHHHHHHHHHHHcC---
Q 009708 315 GLCAVQDESAGLVVAVV--DPQPGQSIVDCCAAPGGKTLYMASCLSG-----QGLVYAIDINKGRLRILNETAKLHQ--- 384 (528)
Q Consensus 315 G~~~~Qd~~s~l~~~~l--~~~~g~~VLDl~aG~G~kt~~la~~~~~-----~~~v~avD~s~~~l~~~~~n~~~~g--- 384 (528)
|..+.|......+...+ .+.++.+|||+|||+|..+..+++.++. .++|+++|+++.+++.++++++..+
T Consensus 62 ~~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~ 141 (227)
T 1r18_A 62 GVTISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM 141 (227)
T ss_dssp TEEECCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred CCccCChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccc
Confidence 33333444445555666 4778999999999999999999987542 3699999999999999999998876
Q ss_pred --CCccEEEEcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEE
Q 009708 385 --VNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLV 462 (528)
Q Consensus 385 --~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lv 462 (528)
..+ ++++++|+...... ..+||+|+++.++.. +++.+.++|||||+|+
T Consensus 142 ~~~~~-v~~~~~d~~~~~~~-~~~fD~I~~~~~~~~----------------------------~~~~~~~~LkpgG~lv 191 (227)
T 1r18_A 142 LDSGQ-LLIVEGDGRKGYPP-NAPYNAIHVGAAAPD----------------------------TPTELINQLASGGRLI 191 (227)
T ss_dssp HHHTS-EEEEESCGGGCCGG-GCSEEEEEECSCBSS----------------------------CCHHHHHTEEEEEEEE
T ss_pred cCCCc-eEEEECCcccCCCc-CCCccEEEECCchHH----------------------------HHHHHHHHhcCCCEEE
Confidence 454 89999999873221 257999999887621 2356788999999999
Q ss_pred EEcC
Q 009708 463 YSTC 466 (528)
Q Consensus 463 ysTc 466 (528)
+++.
T Consensus 192 i~~~ 195 (227)
T 1r18_A 192 VPVG 195 (227)
T ss_dssp EEES
T ss_pred EEEe
Confidence 7654
No 133
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.29 E-value=8.5e-12 Score=120.04 Aligned_cols=120 Identities=18% Similarity=0.175 Sum_probs=94.7
Q ss_pred cceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc
Q 009708 314 EGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH 393 (528)
Q Consensus 314 ~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~ 393 (528)
.|....+......+...+.+.++.+|||+|||+|..+..++... .+|+++|+++.+++.+++++...+ ++++++
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~ 122 (231)
T 1vbf_A 49 PGINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN---NIKLIL 122 (231)
T ss_dssp TTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS---SEEEEE
T ss_pred CCCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEE
Confidence 44555555556667777788889999999999999999999872 799999999999999999998877 489999
Q ss_pred CccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 394 ADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 394 ~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
+|+..... ..++||+|+++.++.. +.+.+.++|||||++++++.+-
T Consensus 123 ~d~~~~~~-~~~~fD~v~~~~~~~~----------------------------~~~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 123 GDGTLGYE-EEKPYDRVVVWATAPT----------------------------LLCKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp SCGGGCCG-GGCCEEEEEESSBBSS----------------------------CCHHHHHTEEEEEEEEEEECSS
T ss_pred CCcccccc-cCCCccEEEECCcHHH----------------------------HHHHHHHHcCCCcEEEEEEcCC
Confidence 99987322 2367999999866521 1234678999999999887653
No 134
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.29 E-value=1.3e-11 Score=130.76 Aligned_cols=88 Identities=23% Similarity=0.292 Sum_probs=75.2
Q ss_pred HHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---C
Q 009708 327 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---S 403 (528)
Q Consensus 327 ~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---~ 403 (528)
+...+.+.++++|||+|||+|.+++.++.. ..+|+|+|+|+.+++.+++|++.+|+++ ++++++|+.+.... .
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~-v~f~~~d~~~~l~~~~~~ 353 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQN-VTFYHENLEEDVTKQPWA 353 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEECCTTSCCSSSGGG
T ss_pred HHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEECCHHHHhhhhhhh
Confidence 344566778889999999999999999975 5799999999999999999999999985 99999999874321 2
Q ss_pred CCCCCEEEEcCCCCC
Q 009708 404 TVKCDKVLLDAPCSG 418 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg 418 (528)
.++||+|++|||+.|
T Consensus 354 ~~~fD~Vv~dPPr~g 368 (433)
T 1uwv_A 354 KNGFDKVLLDPARAG 368 (433)
T ss_dssp TTCCSEEEECCCTTC
T ss_pred cCCCCEEEECCCCcc
Confidence 357999999999975
No 135
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.28 E-value=2.4e-11 Score=120.90 Aligned_cols=118 Identities=16% Similarity=0.204 Sum_probs=92.8
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCC
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 405 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~ 405 (528)
.+...+.+.++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.++++++..|+..+++++++|+.+++ +
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----~ 128 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGATMMRAVEKY--DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD----E 128 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC----C
T ss_pred HHHHHcCCCCcCEEEEECCcccHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC----C
Confidence 34555667889999999999999999999664 35999999999999999999999998767999999997654 6
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
+||+|++.-. +..-++ .+ ...+++++.++|||||++++.+....
T Consensus 129 ~fD~v~~~~~------l~~~~~-------~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 129 PVDRIVSIGA------FEHFGH-------ER-------YDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp CCSEEEEESC------GGGTCT-------TT-------HHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred CeeEEEEeCc------hhhcCh-------HH-------HHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 7999997422 211110 11 23468999999999999998776543
No 136
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.28 E-value=4.6e-12 Score=127.67 Aligned_cols=114 Identities=18% Similarity=0.088 Sum_probs=91.5
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
+.++.+|||+|||+|..+..++....+..+|+++|+|+.+++.+++++...|+.++++++++|+.+++.. ++||+|++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~fD~v~~ 193 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR--EGYDLLTS 193 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC--SCEEEEEC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc--CCeEEEEE
Confidence 4678899999999999999986333456799999999999999999999999988899999999987533 78999997
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
+.+. ...| ++.. +..+++.+.++|||||+|++++..
T Consensus 194 ~~~~------~~~~------~~~~-------~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 194 NGLN------IYEP------DDAR-------VTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp CSSG------GGCC------CHHH-------HHHHHHHHHHHEEEEEEEEEECCC
T ss_pred CChh------hhcC------CHHH-------HHHHHHHHHHhcCCCeEEEEEecC
Confidence 5443 1111 1111 234699999999999999988744
No 137
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.28 E-value=3.7e-11 Score=125.58 Aligned_cols=125 Identities=18% Similarity=0.155 Sum_probs=95.2
Q ss_pred HHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCC-------------------------------------CcEEEEE
Q 009708 324 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG-------------------------------------QGLVYAI 366 (528)
Q Consensus 324 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~-------------------------------------~~~v~av 366 (528)
+..++.+....++..|||+|||+|++++.+|....+ ..+|+|+
T Consensus 190 Aa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~Gv 269 (393)
T 3k0b_A 190 AAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGG 269 (393)
T ss_dssp HHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred HHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEE
Confidence 444556677788899999999999999998876432 1469999
Q ss_pred cCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHH
Q 009708 367 DINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDE 446 (528)
Q Consensus 367 D~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~ 446 (528)
|+|+.+++.+++|++.+|+.+.++++++|+.++.. ..+||+|++|||+.- ...+...+..++..
T Consensus 270 Did~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~--~~~fD~Iv~NPPYg~--------------rl~~~~~l~~ly~~ 333 (393)
T 3k0b_A 270 DIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT--EDEYGVVVANPPYGE--------------RLEDEEAVRQLYRE 333 (393)
T ss_dssp ESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC--CCCSCEEEECCCCCC--------------SHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC--CCCCCEEEECCCCcc--------------ccCCchhHHHHHHH
Confidence 99999999999999999998779999999998764 358999999999831 11233445555665
Q ss_pred HHHHHhccCcCCCEEEEEcC
Q 009708 447 LLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 447 lL~~a~~~LkpGG~LvysTc 466 (528)
+-+.... -+||.+++.|.
T Consensus 334 lg~~lk~--~~g~~~~iit~ 351 (393)
T 3k0b_A 334 MGIVYKR--MPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHT--CTTCEEEEEEC
T ss_pred HHHHHhc--CCCCEEEEEEC
Confidence 5444443 46888887654
No 138
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.28 E-value=5.4e-12 Score=121.97 Aligned_cols=113 Identities=13% Similarity=0.091 Sum_probs=85.5
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCC-hHHHHHH---HHHHHHcCCCccEEEEcCccccccccCCCCCCE
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDIN-KGRLRIL---NETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 409 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s-~~~l~~~---~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~ 409 (528)
+++++|||+|||+|..+..+++. .+..+|+|+|+| +.+++.+ +++++..|+.+ +.++++|+..++......+|.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~-~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~-v~~~~~d~~~l~~~~~d~v~~ 100 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAIN-DQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSN-VVFVIAAAESLPFELKNIADS 100 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHT-CTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSS-EEEECCBTTBCCGGGTTCEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCC-eEEEEcCHHHhhhhccCeEEE
Confidence 57889999999999999999875 456799999999 6666665 88888888886 899999999885433356788
Q ss_pred EEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 410 VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 410 Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
|.++.|.. .........+..+|..+.++|||||++++++
T Consensus 101 i~~~~~~~-----------------~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 101 ISILFPWG-----------------TLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EEEESCCH-----------------HHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEeCCCc-----------------HHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 88877751 1111111122457899999999999999843
No 139
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.27 E-value=5.6e-12 Score=119.62 Aligned_cols=114 Identities=8% Similarity=0.061 Sum_probs=83.6
Q ss_pred cCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc------------CCCccEEEEcCcccc
Q 009708 331 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH------------QVNSVIRTIHADLRT 398 (528)
Q Consensus 331 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~------------g~~~~i~~~~~D~~~ 398 (528)
+.+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.++++.... +.. +++++++|+.+
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~d~~~ 93 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAP-GIEIWCGDFFA 93 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECS-SSEEEEECCSS
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCC-ccEEEECcccc
Confidence 45567889999999999999999986 469999999999999999876431 123 48999999988
Q ss_pred ccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 399 FADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 399 ~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
++....++||+|++... +..- ...+ ...+++++.++|||||++++.++.+
T Consensus 94 l~~~~~~~fD~v~~~~~------l~~l-------~~~~-------~~~~l~~~~r~LkpgG~~~l~~~~~ 143 (203)
T 1pjz_A 94 LTARDIGHCAAFYDRAA------MIAL-------PADM-------RERYVQHLEALMPQACSGLLITLEY 143 (203)
T ss_dssp STHHHHHSEEEEEEESC------GGGS-------CHHH-------HHHHHHHHHHHSCSEEEEEEEEESS
T ss_pred CCcccCCCEEEEEECcc------hhhC-------CHHH-------HHHHHHHHHHHcCCCcEEEEEEEec
Confidence 76421257999986322 1111 1111 2346899999999999966666554
No 140
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.27 E-value=9.5e-12 Score=120.15 Aligned_cols=106 Identities=22% Similarity=0.249 Sum_probs=84.0
Q ss_pred cCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc--cCCCCCC
Q 009708 331 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD--NSTVKCD 408 (528)
Q Consensus 331 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~--~~~~~fD 408 (528)
+.+.++.+|||+|||+|..+..+++..+ .++|+|+|+++.+++.++++++.. + ++.++++|+..... .....||
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~-~v~~~~~d~~~~~~~~~~~~~~D 145 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--E-NIIPILGDANKPQEYANIVEKVD 145 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--T-TEEEEECCTTCGGGGTTTSCCEE
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--C-CeEEEECCCCCcccccccCccEE
Confidence 3466889999999999999999999865 679999999999999999998765 4 48999999987211 1126799
Q ss_pred EEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 409 KVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 409 ~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+|+.|+|..+ ....+++++.++|||||+++++
T Consensus 146 ~v~~~~~~~~------------------------~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 146 VIYEDVAQPN------------------------QAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEECCCSTT------------------------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEecCChh------------------------HHHHHHHHHHHhCCCCcEEEEE
Confidence 9998765411 1134589999999999999875
No 141
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.26 E-value=8.5e-12 Score=135.38 Aligned_cols=172 Identities=17% Similarity=0.137 Sum_probs=118.7
Q ss_pred ccceeEeecchHHHHHHhcC----CCCCCeEEEeCCccchHHHHHHHHcC--CCcEEEEEcCChHHHHHHHHHHHHcCCC
Q 009708 313 KEGLCAVQDESAGLVVAVVD----PQPGQSIVDCCAAPGGKTLYMASCLS--GQGLVYAIDINKGRLRILNETAKLHQVN 386 (528)
Q Consensus 313 ~~G~~~~Qd~~s~l~~~~l~----~~~g~~VLDl~aG~G~kt~~la~~~~--~~~~v~avD~s~~~l~~~~~n~~~~g~~ 386 (528)
..|.|+.....+.+++.++. +.++.+|+|.|||+|++.+.+++.+. +...++|+|+++..+..++.|+..+|+.
T Consensus 195 ~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 274 (542)
T 3lkd_A 195 KAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP 274 (542)
T ss_dssp CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred cCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC
Confidence 35778887888888888877 56788999999999999999998864 2568999999999999999999999985
Q ss_pred -ccEEEEcCccccc--cccCCCCCCEEEEcCCCCCCccccC--CchhhccCCHHH-HHHHHHHHHHHHHHHhccCc-CCC
Q 009708 387 -SVIRTIHADLRTF--ADNSTVKCDKVLLDAPCSGLGVLSK--RADLRWNRRLED-MEELKILQDELLDAASLLVK-PGG 459 (528)
Q Consensus 387 -~~i~~~~~D~~~~--~~~~~~~fD~Vl~D~Pcsg~G~~~~--~pd~~~~~~~~~-~~~l~~~q~~lL~~a~~~Lk-pGG 459 (528)
..+.+.++|.... +.....+||+|++|||+++...-.. ..+.+|.. .. +......+..++.++.++|| +||
T Consensus 275 ~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~--~G~~~~~s~~~~~Fl~~~l~~Lk~~gG 352 (542)
T 3lkd_A 275 IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSP--FGKLAPKSKADFAFLLHGYYHLKQDNG 352 (542)
T ss_dssp GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGG--GSSCCCTTCCHHHHHHHHHHTBCTTTC
T ss_pred cCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhh--hhhcCCCchhhHHHHHHHHHHhCCCce
Confidence 3478999998765 3223468999999999974321100 01112210 00 00001112247999999999 999
Q ss_pred EEEEEcCC--CCchhhHHHHHHHHhhCCC
Q 009708 460 VLVYSTCS--IDPEENEERVEAFLLRHPE 486 (528)
Q Consensus 460 ~LvysTcs--~~~~Ene~~v~~~l~~~~~ 486 (528)
++++.+-. +.....+..+..+|.++-.
T Consensus 353 r~a~VlP~g~Lf~~~~~~~iRk~Lle~~~ 381 (542)
T 3lkd_A 353 VMAIVLPHGVLFRGNAEGTIRKALLEEGA 381 (542)
T ss_dssp EEEEEEETHHHHCCTHHHHHHHHHHHTTC
T ss_pred eEEEEecchHhhCCchhHHHHHHHHhCCc
Confidence 98766543 2222224556666655433
No 142
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.26 E-value=1.2e-11 Score=112.69 Aligned_cols=125 Identities=23% Similarity=0.270 Sum_probs=90.2
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc-------cCCC
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-------NSTV 405 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~-------~~~~ 405 (528)
+.++.+|||+|||+|..+..+++.+++..+++++|+++ ++.. . +++++++|+..... ...+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~-~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------V-GVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------T-TEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------C-cEEEEEcccccchhhhhhhccCCCC
Confidence 67788999999999999999999865568999999999 6432 3 48899999987531 1236
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhh
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLR 483 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~ 483 (528)
+||+|++|+|+...+.. ..+.......+..+++.+.++|+|||.+++++... ++...+...+..
T Consensus 88 ~~D~i~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~ 151 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTP-----------AVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG---EGFDEYLREIRS 151 (180)
T ss_dssp CEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS---TTHHHHHHHHHH
T ss_pred ceeEEEECCCccccCCC-----------ccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC---CcHHHHHHHHHH
Confidence 89999999998654431 11222334455788999999999999999765433 233334444544
No 143
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.25 E-value=1.1e-11 Score=125.32 Aligned_cols=131 Identities=12% Similarity=0.093 Sum_probs=93.2
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHH--cCC-CccEEEEcCccccccccCCCCCCEE
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL--HQV-NSVIRTIHADLRTFADNSTVKCDKV 410 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~--~g~-~~~i~~~~~D~~~~~~~~~~~fD~V 410 (528)
..+.+|||+|||+|..+..+++. .+..+|+++|+++.+++.+++++.. .++ ..+++++++|+..+.....++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKH-PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 45679999999999999999875 3457999999999999999999876 344 3469999999987654345789999
Q ss_pred EEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC-CCchhhHHHHHHHHhh
Q 009708 411 LLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS-IDPEENEERVEAFLLR 483 (528)
Q Consensus 411 l~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs-~~~~Ene~~v~~~l~~ 483 (528)
++|+|... + |. . ...+.++++.+.++|+|||+|+..+.+ +...+....+..++++
T Consensus 173 i~d~~~~~-~-----~~-------~-----~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 228 (304)
T 2o07_A 173 ITDSSDPM-G-----PA-------E-----SLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQS 228 (304)
T ss_dssp EEECC-----------------------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHH
T ss_pred EECCCCCC-C-----cc-------h-----hhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHH
Confidence 99987521 1 00 0 012346799999999999999987744 3332223334455554
No 144
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.25 E-value=1.9e-11 Score=115.36 Aligned_cols=103 Identities=15% Similarity=0.210 Sum_probs=86.2
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 414 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~ 414 (528)
++.+|||+|||+|..+..++... +..+|+++|+++.+++.++++++.+++++ ++++++|+..+.. .++||+|+++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~--~~~~D~i~~~~ 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFPS--EPPFDGVISRA 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSCC--CSCEEEEECSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCCc--cCCcCEEEEec
Confidence 47799999999999999999875 45799999999999999999999999987 9999999987653 36799999742
Q ss_pred CCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 415 PCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 415 Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
-. + ...+++.+.++|+|||.+++....
T Consensus 141 ~~-------------------~-------~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 141 FA-------------------S-------LNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp SS-------------------S-------HHHHHHHHTTSEEEEEEEEEEESS
T ss_pred cC-------------------C-------HHHHHHHHHHhcCCCcEEEEEeCC
Confidence 10 1 235699999999999999987554
No 145
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.25 E-value=2.1e-11 Score=119.82 Aligned_cols=123 Identities=17% Similarity=0.155 Sum_probs=95.5
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
..++.+|||+|||+|..++.++.. + .+|+|+|+++.+++.+++|++.+++. ++++++|+..... .++||+|++
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g--~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~--~~~fD~Vv~ 190 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-G--GKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALP--FGPFDLLVA 190 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGG--GCCEEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-C--CeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCc--CCCCCEEEE
Confidence 467889999999999999998875 2 39999999999999999999999986 7899999877432 357999999
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCCceEec
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPEFSIDP 491 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~~ 491 (528)
+.+. .. ...++..+.++|||||+++++.... +..+.+...++++ +|++..
T Consensus 191 n~~~------------------~~-------~~~~l~~~~~~LkpgG~lils~~~~---~~~~~v~~~l~~~-Gf~~~~ 240 (254)
T 2nxc_A 191 NLYA------------------EL-------HAALAPRYREALVPGGRALLTGILK---DRAPLVREAMAGA-GFRPLE 240 (254)
T ss_dssp ECCH------------------HH-------HHHHHHHHHHHEEEEEEEEEEEEEG---GGHHHHHHHHHHT-TCEEEE
T ss_pred CCcH------------------HH-------HHHHHHHHHHHcCCCCEEEEEeecc---CCHHHHHHHHHHC-CCEEEE
Confidence 7653 11 2456899999999999999875432 3344556666664 566654
No 146
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.25 E-value=2.3e-11 Score=128.51 Aligned_cols=78 Identities=22% Similarity=0.269 Sum_probs=69.7
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
+.++++|||+|||+|.+++.+|+. ..+|+|+|+++.+++.+++|++.+|++ ++++++|+.++.. .+||+|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~---~~fD~Vv~ 359 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSV---KGFDTVIV 359 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCC---TTCSEEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCc---cCCCEEEE
Confidence 567889999999999999999975 469999999999999999999999987 8999999988753 27999999
Q ss_pred cCCCCC
Q 009708 413 DAPCSG 418 (528)
Q Consensus 413 D~Pcsg 418 (528)
|||..|
T Consensus 360 dPPr~g 365 (425)
T 2jjq_A 360 DPPRAG 365 (425)
T ss_dssp CCCTTC
T ss_pred cCCccc
Confidence 999865
No 147
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.25 E-value=1.8e-11 Score=122.48 Aligned_cols=118 Identities=12% Similarity=0.099 Sum_probs=93.7
Q ss_pred HHHHHhc----CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc
Q 009708 325 GLVVAVV----DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA 400 (528)
Q Consensus 325 ~l~~~~l----~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~ 400 (528)
..+...+ ...++.+|||+|||+|..+..+++.. +.+|+++|+++.+++.++++++..|+.++++++++|+..++
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 145 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP 145 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC
Confidence 3444555 67789999999999999999999875 35999999999999999999999998777999999998865
Q ss_pred ccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 401 DNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 401 ~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
. ..++||+|++.-.. .+-++ ...+|+++.++|||||+|++++..
T Consensus 146 ~-~~~~fD~v~~~~~l------~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 146 C-EDNSYDFIWSQDAF------LHSPD----------------KLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp S-CTTCEEEEEEESCG------GGCSC----------------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred C-CCCCEeEEEecchh------hhcCC----------------HHHHHHHHHHHcCCCeEEEEEEec
Confidence 2 24689999974221 11111 235699999999999999988654
No 148
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.25 E-value=3.7e-11 Score=114.59 Aligned_cols=121 Identities=13% Similarity=0.140 Sum_probs=89.8
Q ss_pred HHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCc----cEEEEcCcccccc
Q 009708 325 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS----VIRTIHADLRTFA 400 (528)
Q Consensus 325 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~----~i~~~~~D~~~~~ 400 (528)
..+...+...++.+|||+|||+|..+..+++. .+..+|+++|+|+.+++.+++++...++.+ +++++++|+....
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKD-KSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHTS-TTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC
T ss_pred HHHHHHHhhcCCCEEEEecCCCCHHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc
Confidence 34445555567889999999999999999875 334699999999999999999998888764 5999999986544
Q ss_pred ccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 401 DNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 401 ~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
. ..++||+|++... +..- ...+ ...+++.+.++|||||.++...+.
T Consensus 98 ~-~~~~fD~V~~~~~------l~~~-------~~~~-------~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 98 K-RFSGYDAATVIEV------IEHL-------DENR-------LQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp G-GGTTCSEEEEESC------GGGC-------CHHH-------HHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred c-ccCCCCEEEEHHH------HHhC-------CHHH-------HHHHHHHHHHhhCCCEEEEEccch
Confidence 2 2368999997422 2111 1122 235699999999999977755443
No 149
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.24 E-value=5.2e-11 Score=111.31 Aligned_cols=112 Identities=23% Similarity=0.332 Sum_probs=81.9
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCC--------cEEEEEcCChHHHHHHHHHHHHcCCCccEEEE-cCccccccc--
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQ--------GLVYAIDINKGRLRILNETAKLHQVNSVIRTI-HADLRTFAD-- 401 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~--------~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~-~~D~~~~~~-- 401 (528)
+.++.+|||+|||+|..+..+++.++.. ++|+|+|+++.+ .+.+ ++++ ++|+.....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~-~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEG-ATFLCPADVTDPRTSQ 87 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTT-CEEECSCCTTSHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCC-CeEEEeccCCCHHHHH
Confidence 5678999999999999999999986543 799999999842 2343 7888 899876431
Q ss_pred -----cCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 402 -----NSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 402 -----~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
....+||+|++|.++...|.. ..+......++..+++.+.++|||||+|++.++.
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGFR-----------DLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCCc-----------ccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 112479999999865444431 0122233445678899999999999999987654
No 150
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.24 E-value=4.9e-11 Score=114.78 Aligned_cols=119 Identities=17% Similarity=0.225 Sum_probs=92.0
Q ss_pred HHHHhcC-CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCC
Q 009708 326 LVVAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 404 (528)
Q Consensus 326 l~~~~l~-~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~ 404 (528)
.+..++. ..++.+|||+|||+|..+..+++.. +..+|+++|+|+.+++.+++++...+ +++++++|+..++..
T Consensus 34 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~-- 107 (234)
T 3dtn_A 34 VSVSIASVDTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFE-- 107 (234)
T ss_dssp HHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCC--
T ss_pred HHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCC--
Confidence 3444444 5678899999999999999999975 36799999999999999999887665 489999999887643
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCc
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDP 470 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~ 470 (528)
++||+|++.... ..-+ ... ...+|+++.++|||||++++++.....
T Consensus 108 ~~fD~v~~~~~l------~~~~-------~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 108 EKYDMVVSALSI------HHLE-------DED-------KKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp SCEEEEEEESCG------GGSC-------HHH-------HHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred CCceEEEEeCcc------ccCC-------HHH-------HHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 789999986433 1111 111 134699999999999999998866544
No 151
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.24 E-value=1.8e-11 Score=122.05 Aligned_cols=117 Identities=20% Similarity=0.087 Sum_probs=92.9
Q ss_pred HHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCC
Q 009708 325 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 404 (528)
Q Consensus 325 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~ 404 (528)
.++..+....++.+|||+|||+|..+..+++..++..+|+|+|+|+.+++.+++++...+. +++++++|+.+++. .
T Consensus 12 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~--~ 87 (284)
T 3gu3_A 12 FLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIEL--N 87 (284)
T ss_dssp HHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCC--S
T ss_pred HHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCc--C
Confidence 3444445667889999999999999999998765557999999999999999999988776 48999999998654 3
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
++||+|++.... ..-++ ...+++++.++|||||+++..+..
T Consensus 88 ~~fD~v~~~~~l------~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 DKYDIAICHAFL------LHMTT----------------PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SCEEEEEEESCG------GGCSS----------------HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCeeEEEECChh------hcCCC----------------HHHHHHHHHHHcCCCCEEEEEecc
Confidence 689999986432 11111 135699999999999999987765
No 152
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.23 E-value=3.1e-11 Score=120.09 Aligned_cols=109 Identities=17% Similarity=0.128 Sum_probs=87.0
Q ss_pred HhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCC
Q 009708 329 AVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCD 408 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD 408 (528)
..+...++.+|||+|||+|..+..++.. +.+|+|+|+|+.+++.+++++...|+ +++++++|+..+.. .++||
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--~~~fD 186 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI--QENYD 186 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC--CSCEE
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc--cCCcc
Confidence 3344447889999999999999999986 45999999999999999999999988 38999999988664 47899
Q ss_pred EEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 409 KVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 409 ~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+|+++.+... .+.... ..+++.+.++|||||++++.
T Consensus 187 ~i~~~~~~~~-------------~~~~~~-------~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 187 FIVSTVVFMF-------------LNRERV-------PSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp EEEECSSGGG-------------SCGGGH-------HHHHHHHHHTEEEEEEEEEE
T ss_pred EEEEccchhh-------------CCHHHH-------HHHHHHHHHhcCCCcEEEEE
Confidence 9998765421 111222 34699999999999997654
No 153
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.23 E-value=3.3e-11 Score=120.04 Aligned_cols=131 Identities=12% Similarity=0.066 Sum_probs=94.1
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc--CC-CccEEEEcCccccccccCCCCCCEEE
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADNSTVKCDKVL 411 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~--g~-~~~i~~~~~D~~~~~~~~~~~fD~Vl 411 (528)
.+.+|||+|||+|+.+..+++. .+..+|++||+++.+++.+++++... ++ ..+++++++|+..+.....++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKH-PSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTC-TTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhC-CCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 4579999999999999999875 34579999999999999999998653 34 34699999999886544457899999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC-chhhHHHHHHHHhhC
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID-PEENEERVEAFLLRH 484 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~-~~Ene~~v~~~l~~~ 484 (528)
+|+|.. .+. ++..+ ..++++.+.+.|+|||+++..+.+.. ..+....+...+++.
T Consensus 154 ~d~~~~-~~~----~~~l~-------------~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 209 (275)
T 1iy9_A 154 VDSTEP-VGP----AVNLF-------------TKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI 209 (275)
T ss_dssp ESCSSC-CSC----CCCCS-------------TTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT
T ss_pred ECCCCC-CCc----chhhh-------------HHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh
Confidence 998862 121 10000 12468889999999999998876532 223333344445543
No 154
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.23 E-value=2.7e-12 Score=139.51 Aligned_cols=173 Identities=14% Similarity=0.175 Sum_probs=118.7
Q ss_pred ccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCC--------------CcEEEEEcCChHHHHHHHH
Q 009708 313 KEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG--------------QGLVYAIDINKGRLRILNE 378 (528)
Q Consensus 313 ~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~--------------~~~v~avD~s~~~l~~~~~ 378 (528)
..|.|+.....+.+++.++.+.++ +|||.|||+|++.+.++..+.. ...++|+|+++.++..++.
T Consensus 223 ~~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~ 301 (544)
T 3khk_A 223 QGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAM 301 (544)
T ss_dssp CSTTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHH
T ss_pred cCCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHH
Confidence 358888888889999999998877 9999999999999888765421 3589999999999999999
Q ss_pred HHHHcCCCccEEEEcCccccccccCCCCCCEEEEcCCCCCCcccc--CCchhhccCCHHH-----HHHHHHHHHHHHHHH
Q 009708 379 TAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLS--KRADLRWNRRLED-----MEELKILQDELLDAA 451 (528)
Q Consensus 379 n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~--~~pd~~~~~~~~~-----~~~l~~~q~~lL~~a 451 (528)
|+..+|+...+.+.++|....+.....+||+|++|||++....-. ...+.+|...... +..-...+..++.++
T Consensus 302 Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~ 381 (544)
T 3khk_A 302 NMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHM 381 (544)
T ss_dssp HHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHH
T ss_pred HHHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHH
Confidence 999999876555588898765433346899999999997532111 0112222110000 000001122478999
Q ss_pred hccCcCCCEEEEEcCC--CCch-hhHHHHHHHHhhCCC
Q 009708 452 SLLVKPGGVLVYSTCS--IDPE-ENEERVEAFLLRHPE 486 (528)
Q Consensus 452 ~~~LkpGG~LvysTcs--~~~~-Ene~~v~~~l~~~~~ 486 (528)
+++|||||++++.+-. +... ..+..+..+|.++-.
T Consensus 382 l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 382 LYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDL 419 (544)
T ss_dssp HHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTC
T ss_pred HHHhccCceEEEEecchhhhcCcchHHHHHHHHHhCCc
Confidence 9999999998876533 2222 245566666665533
No 155
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.23 E-value=3.1e-11 Score=120.06 Aligned_cols=107 Identities=21% Similarity=0.257 Sum_probs=87.3
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 414 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~ 414 (528)
++.+|||+|||+|..+..++.. +.+|+|+|+|+.+++.++++++..|+..+++++++|+..+.....++||+|++..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 144 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA 144 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEES
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECc
Confidence 3679999999999999999986 5699999999999999999999999866799999999988744457899999853
Q ss_pred CCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 415 PCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 415 Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
.. ..-++ ...+|+.+.++|||||++++.+.
T Consensus 145 ~l------~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 145 VL------EWVAD----------------PRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp CG------GGCSC----------------HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hh------hcccC----------------HHHHHHHHHHHcCCCeEEEEEEe
Confidence 32 11111 13469999999999999998765
No 156
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.23 E-value=9.6e-12 Score=124.52 Aligned_cols=94 Identities=12% Similarity=0.109 Sum_probs=79.5
Q ss_pred eecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc
Q 009708 319 VQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 398 (528)
Q Consensus 319 ~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~ 398 (528)
.+......++..+.+.++++|||+|||+|..|..+++. ..+|+|+|+|+.+++.+++++...+..++++++++|+..
T Consensus 12 ~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~ 88 (285)
T 1zq9_A 12 KNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLK 88 (285)
T ss_dssp CCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTT
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceec
Confidence 34445667777788888999999999999999999987 469999999999999999999887775569999999987
Q ss_pred ccccCCCCCCEEEEcCCCCC
Q 009708 399 FADNSTVKCDKVLLDAPCSG 418 (528)
Q Consensus 399 ~~~~~~~~fD~Vl~D~Pcsg 418 (528)
+.. ..||.|++|+|+..
T Consensus 89 ~~~---~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 89 TDL---PFFDTCVANLPYQI 105 (285)
T ss_dssp SCC---CCCSEEEEECCGGG
T ss_pred ccc---hhhcEEEEecCccc
Confidence 642 36999999999953
No 157
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.23 E-value=2.2e-11 Score=121.28 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=89.3
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
+.++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.+++++...++..+++++++|+...+....++||+|++
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEE
Confidence 357889999999999999998875 346999999999999999999999888667999999998764323468999997
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
+... ... ..+..+ ...+|+.+.++|||||+|+++++.
T Consensus 140 ~~~l------~~~-----~~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 140 QFSF------HYA-----FSTSES-------LDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp ESCG------GGG-----GSSHHH-------HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred Cchh------hhh-----cCCHHH-------HHHHHHHHHHhcCCCCEEEEEECC
Confidence 6322 000 011122 345699999999999999988764
No 158
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.23 E-value=3.7e-11 Score=118.17 Aligned_cols=136 Identities=13% Similarity=0.094 Sum_probs=91.9
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHH----------cC------CCccEEEEcCc
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKL----------HQ------VNSVIRTIHAD 395 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~----------~g------~~~~i~~~~~D 395 (528)
.+.++.+|||+|||+|..+..+|+. +.+|+|+|+|+.+++.++++... .+ ...+++++++|
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D 141 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS 141 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence 3457889999999999999999985 45999999999999999765431 00 11348999999
Q ss_pred cccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCch----
Q 009708 396 LRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPE---- 471 (528)
Q Consensus 396 ~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~---- 471 (528)
+.++.....++||+|++.... ..-| ..+ ...+++.+.++|||||++++.|......
T Consensus 142 ~~~l~~~~~~~FD~V~~~~~l------~~l~-------~~~-------~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g 201 (252)
T 2gb4_A 142 IFDLPRANIGKFDRIWDRGAL------VAIN-------PGD-------HDRYADIILSLLRKEFQYLVAVLSYDPTKHAG 201 (252)
T ss_dssp TTTGGGGCCCCEEEEEESSST------TTSC-------GGG-------HHHHHHHHHHTEEEEEEEEEEEEECCTTSCCC
T ss_pred cccCCcccCCCEEEEEEhhhh------hhCC-------HHH-------HHHHHHHHHHHcCCCeEEEEEEEecCCccCCC
Confidence 998765433689999963221 1111 111 2346899999999999997655432110
Q ss_pred ----hhHHHHHHHHhhCCCceEecC
Q 009708 472 ----ENEERVEAFLLRHPEFSIDPA 492 (528)
Q Consensus 472 ----Ene~~v~~~l~~~~~~~~~~~ 492 (528)
-..+.+..++.. .|++...
T Consensus 202 ~~~~~~~~el~~~l~~--~f~v~~~ 224 (252)
T 2gb4_A 202 PPFYVPSAELKRLFGT--KCSMQCL 224 (252)
T ss_dssp SSCCCCHHHHHHHHTT--TEEEEEE
T ss_pred CCCCCCHHHHHHHhhC--CeEEEEE
Confidence 123445556654 3666543
No 159
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.22 E-value=2.9e-11 Score=121.28 Aligned_cols=111 Identities=15% Similarity=0.138 Sum_probs=87.7
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc-CCCccEEEEcCccccccccC-----CCCC
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHADLRTFADNS-----TVKC 407 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~-g~~~~i~~~~~D~~~~~~~~-----~~~f 407 (528)
.++.+|||+|||+|..+..+++.+.+..+|+|+|+|+.+++.++++++.. +...+++++++|+.++.... .++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 57889999999999999999987645789999999999999999999987 44446999999998865332 2689
Q ss_pred CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 408 DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 408 D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
|+|++..... |. + ...+++.+.++|||||+|++.+++
T Consensus 115 D~V~~~~~l~------------~~----~-------~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 115 DMITAVECAH------------WF----D-------FEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp EEEEEESCGG------------GS----C-------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eEEeHhhHHH------------Hh----C-------HHHHHHHHHHhcCCCcEEEEEecC
Confidence 9999853321 11 1 235689999999999999875443
No 160
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.22 E-value=5.7e-11 Score=111.67 Aligned_cols=106 Identities=20% Similarity=0.183 Sum_probs=84.1
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
..++ +|||+|||+|..+..++.. +.+|+++|+++.+++.+++++...+. +++++++|+..+.. ..++||+|++
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-~~~~fD~v~~ 100 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDI-VADAWEGIVS 100 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSC-CTTTCSEEEE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCC-CcCCccEEEE
Confidence 3466 9999999999999998875 46999999999999999999998887 38899999987642 2468999997
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
.... ....+ ...+++.+.++|||||++++++..
T Consensus 101 ~~~~---------------~~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 101 IFCH---------------LPSSL-------RQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp ECCC---------------CCHHH-------HHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred Ehhc---------------CCHHH-------HHHHHHHHHHhcCCCcEEEEEEec
Confidence 3211 01122 345699999999999999988754
No 161
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.21 E-value=8.2e-11 Score=112.01 Aligned_cols=112 Identities=15% Similarity=0.219 Sum_probs=85.7
Q ss_pred cCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEE
Q 009708 331 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKV 410 (528)
Q Consensus 331 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~V 410 (528)
+.+.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++. .+++++++|+..++.. ++||+|
T Consensus 41 ~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~--~~fD~v 110 (220)
T 3hnr_A 41 VVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVP--TSIDTI 110 (220)
T ss_dssp HHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCC--SCCSEE
T ss_pred hhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCC--CCeEEE
Confidence 34457889999999999999999986 5699999999999999988765 2478999999887543 789999
Q ss_pred EEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchh
Q 009708 411 LLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEE 472 (528)
Q Consensus 411 l~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~E 472 (528)
++.... ..-++ .. ...+|+.+.++|||||.+++++......+
T Consensus 111 ~~~~~l------~~~~~-------~~-------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 152 (220)
T 3hnr_A 111 VSTYAF------HHLTD-------DE-------KNVAIAKYSQLLNKGGKIVFADTIFADQD 152 (220)
T ss_dssp EEESCG------GGSCH-------HH-------HHHHHHHHHHHSCTTCEEEEEEECBSSHH
T ss_pred EECcch------hcCCh-------HH-------HHHHHHHHHHhcCCCCEEEEEeccccChH
Confidence 986332 21111 11 13468999999999999998875554443
No 162
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.20 E-value=4.9e-11 Score=121.44 Aligned_cols=115 Identities=15% Similarity=0.208 Sum_probs=87.3
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc--CC-CccEEEEcCccccccccCCCCCCEE
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADNSTVKCDKV 410 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~--g~-~~~i~~~~~D~~~~~~~~~~~fD~V 410 (528)
..+.+|||+|||+|+.+..+++. .+..+|+++|+|+.+++.+++++... ++ ..+++++++|+..+.....++||+|
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 34579999999999999999875 34579999999999999999998762 33 3459999999987654334689999
Q ss_pred EEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 411 LLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 411 l~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
++|++.. .| |. ..+ .+.++++.+.+.|||||++++.+.+
T Consensus 194 i~d~~~p-~~-----~~-------~~l-----~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 194 IVDSSDP-IG-----PA-------ETL-----FNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EEECCCS-SS-----GG-------GGG-----SSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EECCcCC-CC-----cc-------hhh-----hHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9998531 11 10 000 0145789999999999999987655
No 163
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.20 E-value=7.4e-11 Score=116.57 Aligned_cols=116 Identities=16% Similarity=0.261 Sum_probs=92.1
Q ss_pred HHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCC
Q 009708 325 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 404 (528)
Q Consensus 325 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~ 404 (528)
.++.......++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.+++++...++++ ++++++|+..++. ..
T Consensus 27 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~d~~~~~~-~~ 103 (276)
T 3mgg_A 27 KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKN-VKFLQANIFSLPF-ED 103 (276)
T ss_dssp HHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEECCGGGCCS-CT
T ss_pred HHHhhcccCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCC-cEEEEcccccCCC-CC
Confidence 344444456788999999999999999999873 46799999999999999999999999885 9999999987653 24
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
++||+|++.... ..-++ + ..+|+.+.++|||||++++.+
T Consensus 104 ~~fD~v~~~~~l------~~~~~------~----------~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 104 SSFDHIFVCFVL------EHLQS------P----------EEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp TCEEEEEEESCG------GGCSC------H----------HHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEEEEechh------hhcCC------H----------HHHHHHHHHHcCCCcEEEEEE
Confidence 789999985433 11111 1 246889999999999999875
No 164
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.20 E-value=1.7e-11 Score=127.46 Aligned_cols=114 Identities=18% Similarity=0.234 Sum_probs=90.7
Q ss_pred hcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCE
Q 009708 330 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 409 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~ 409 (528)
.+...++.+|||+|||+|..+..+++. +..+|+|+|+| .+++.++++++.+|+.++++++++|+.++... ++||+
T Consensus 58 ~~~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~ 132 (376)
T 3r0q_C 58 NKHHFEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP--EKVDV 132 (376)
T ss_dssp TTTTTTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS--SCEEE
T ss_pred ccccCCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC--CcceE
Confidence 345667899999999999999999986 34599999999 99999999999999998899999999887532 78999
Q ss_pred EEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 410 VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 410 Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
|++++...... +. .. ...++..+.++|||||+|+.+.++
T Consensus 133 Iv~~~~~~~l~----~e--------~~-------~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 133 IISEWMGYFLL----RE--------SM-------FDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp EEECCCBTTBT----TT--------CT-------HHHHHHHHHHHEEEEEEEESSEEE
T ss_pred EEEcChhhccc----ch--------HH-------HHHHHHHHHhhCCCCeEEEEecCe
Confidence 99976432110 00 11 234588889999999999876665
No 165
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.20 E-value=2.8e-11 Score=124.17 Aligned_cols=119 Identities=15% Similarity=0.191 Sum_probs=90.0
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCC
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 405 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~ 405 (528)
.+...+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++.+|+.++++++++|+.++.. ..+
T Consensus 55 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~ 130 (340)
T 2fyt_A 55 FIYQNPHIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL-PVE 130 (340)
T ss_dssp HHHHCGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC-SCS
T ss_pred HHHhhhhhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC-CCC
Confidence 3344455677889999999999999999885 346999999997 999999999999996679999999987642 236
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
+||+|++++.... . .+ ...+ ..+|..+.++|||||+++.+.|+
T Consensus 131 ~~D~Ivs~~~~~~--l--~~--------~~~~-------~~~l~~~~~~LkpgG~lip~~~~ 173 (340)
T 2fyt_A 131 KVDVIISEWMGYF--L--LF--------ESML-------DSVLYAKNKYLAKGGSVYPDICT 173 (340)
T ss_dssp CEEEEEECCCBTT--B--TT--------TCHH-------HHHHHHHHHHEEEEEEEESCEEE
T ss_pred cEEEEEEcCchhh--c--cC--------HHHH-------HHHHHHHHhhcCCCcEEEcccce
Confidence 8999999763211 1 00 0112 24588889999999999844443
No 166
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.20 E-value=8.1e-11 Score=112.36 Aligned_cols=108 Identities=17% Similarity=0.221 Sum_probs=85.3
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.++.+|||+|||+|..+..++.. ..+|+++|+|+.+++.++++++..+ . +++++++|+..+.. ..++||+|+++
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~~~~~~d~~~~~~-~~~~~D~v~~~ 110 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDY---GFEVVGVDISEDMIRKAREYAKSRE-S-NVEFIVGDARKLSF-EDKTFDYVIFI 110 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTT-C-CCEEEECCTTSCCS-CTTCEEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHhcC-C-CceEEECchhcCCC-CCCcEEEEEEc
Confidence 34789999999999999999886 2399999999999999999999887 3 48999999987542 23689999998
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
.+.. . ....+ ...+++.+.++|||||++++.++.
T Consensus 111 ~~~~---~----------~~~~~-------~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 111 DSIV---H----------FEPLE-------LNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp SCGG---G----------CCHHH-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CchH---h----------CCHHH-------HHHHHHHHHHHcCCCcEEEEEecC
Confidence 6621 0 01112 245699999999999999988765
No 167
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.20 E-value=5.2e-11 Score=114.92 Aligned_cols=130 Identities=19% Similarity=0.123 Sum_probs=95.0
Q ss_pred CCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAP 415 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~P 415 (528)
+.+|||+|||+|..+..++. ...+|+|+|+|+.+++.+++++...+...+++++++|+..+.. ..+||+|++...
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~~~ 141 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP--TELFDLIFDYVF 141 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--SSCEEEEEEESS
T ss_pred CCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC--CCCeeEEEEChh
Confidence 34999999999999998875 3678999999999999999999876665569999999998663 358999997533
Q ss_pred CCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCch-------hhHHHHHHHHhhCCCce
Q 009708 416 CSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPE-------ENEERVEAFLLRHPEFS 488 (528)
Q Consensus 416 csg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~-------Ene~~v~~~l~~~~~~~ 488 (528)
.. .-+ +.+. ..+++.+.++|||||+|++.+...... -..+.+..++.+. +|+
T Consensus 142 l~------~~~-------~~~~-------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gf~ 200 (235)
T 3lcc_A 142 FC------AIE-------PEMR-------PAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPI-GFK 200 (235)
T ss_dssp TT------TSC-------GGGH-------HHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGG-TEE
T ss_pred hh------cCC-------HHHH-------HHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHc-CCe
Confidence 21 111 1222 346899999999999999876543221 1244566666654 566
Q ss_pred Eec
Q 009708 489 IDP 491 (528)
Q Consensus 489 ~~~ 491 (528)
++.
T Consensus 201 ~~~ 203 (235)
T 3lcc_A 201 AVS 203 (235)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 168
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.20 E-value=3e-11 Score=124.31 Aligned_cols=118 Identities=15% Similarity=0.165 Sum_probs=91.2
Q ss_pred HHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCC
Q 009708 327 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVK 406 (528)
Q Consensus 327 ~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~ 406 (528)
+...+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++.+|+.++++++++|+.++.. +++
T Consensus 42 i~~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~--~~~ 116 (348)
T 2y1w_A 42 ILQNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL--PEQ 116 (348)
T ss_dssp HHHTGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC--SSC
T ss_pred HHhccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC--CCc
Confidence 344455567889999999999999999875 456999999996 889999999999997679999999987642 367
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
||+|+++++...... +.. ...+..+.++|||||.++.+.++++
T Consensus 117 ~D~Ivs~~~~~~~~~-------------~~~-------~~~l~~~~~~LkpgG~li~~~~~~~ 159 (348)
T 2y1w_A 117 VDIIISEPMGYMLFN-------------ERM-------LESYLHAKKYLKPSGNMFPTIGDVH 159 (348)
T ss_dssp EEEEEECCCBTTBTT-------------TSH-------HHHHHHGGGGEEEEEEEESCEEEEE
T ss_pred eeEEEEeCchhcCCh-------------HHH-------HHHHHHHHhhcCCCeEEEEecCcEE
Confidence 999999876432110 111 2346788999999999997666543
No 169
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.20 E-value=1.1e-10 Score=115.19 Aligned_cols=124 Identities=15% Similarity=0.087 Sum_probs=92.6
Q ss_pred hHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChH------HHHHHHHHHHHcCCCccEEEEcCc-
Q 009708 323 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKG------RLRILNETAKLHQVNSVIRTIHAD- 395 (528)
Q Consensus 323 ~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~------~l~~~~~n~~~~g~~~~i~~~~~D- 395 (528)
....+...+.+.++.+|||+|||+|..+..++...++.++|+++|+|+. +++.++++++..++.++++++++|
T Consensus 31 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 110 (275)
T 3bkx_A 31 HRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTN 110 (275)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCC
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECCh
Confidence 3445556677888999999999999999999988655579999999997 999999999998886679999998
Q ss_pred cc--cccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 396 LR--TFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 396 ~~--~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
.. .++ ...++||+|++..... ..+ ++ ..+++....+++|||++++++....
T Consensus 111 ~~~~~~~-~~~~~fD~v~~~~~l~------~~~------~~----------~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 111 LSDDLGP-IADQHFDRVVLAHSLW------YFA------SA----------NALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp TTTCCGG-GTTCCCSEEEEESCGG------GSS------CH----------HHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred hhhccCC-CCCCCEEEEEEccchh------hCC------CH----------HHHHHHHHHHhCCCCEEEEEEecCC
Confidence 32 222 1246899999864431 111 11 1246666677778999998876653
No 170
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.19 E-value=3e-11 Score=111.26 Aligned_cols=137 Identities=16% Similarity=0.097 Sum_probs=90.2
Q ss_pred cchHHHHHHhcCC--CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc
Q 009708 321 DESAGLVVAVVDP--QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT 398 (528)
Q Consensus 321 d~~s~l~~~~l~~--~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~ 398 (528)
.+.+..++..+.. .++.+|||+|||+|..+..+++. . +|+|+|+|+.+++. .++++++++|+.+
T Consensus 7 ~~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~---~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~~ 72 (170)
T 3q87_B 7 GEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKR---N-TVVSTDLNIRALES----------HRGGNLVRADLLC 72 (170)
T ss_dssp CHHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTT---S-EEEEEESCHHHHHT----------CSSSCEEECSTTT
T ss_pred CccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhc---C-cEEEEECCHHHHhc----------ccCCeEEECChhh
Confidence 4445555555554 66789999999999999999875 2 99999999999987 2347899999987
Q ss_pred ccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHH
Q 009708 399 FADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVE 478 (528)
Q Consensus 399 ~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~ 478 (528)
... .++||+|++|||+...... +. |...... ..++..+.+.+ |||.+++++.+. ...+.+.
T Consensus 73 ~~~--~~~fD~i~~n~~~~~~~~~----~~-~~~~~~~--------~~~~~~~~~~l-pgG~l~~~~~~~---~~~~~l~ 133 (170)
T 3q87_B 73 SIN--QESVDVVVFNPPYVPDTDD----PI-IGGGYLG--------REVIDRFVDAV-TVGMLYLLVIEA---NRPKEVL 133 (170)
T ss_dssp TBC--GGGCSEEEECCCCBTTCCC----TT-TBCCGGG--------CHHHHHHHHHC-CSSEEEEEEEGG---GCHHHHH
T ss_pred hcc--cCCCCEEEECCCCccCCcc----cc-ccCCcch--------HHHHHHHHhhC-CCCEEEEEEecC---CCHHHHH
Confidence 432 2689999999998432110 00 1101111 12355555556 999999876543 2334556
Q ss_pred HHHhhCCCceEec
Q 009708 479 AFLLRHPEFSIDP 491 (528)
Q Consensus 479 ~~l~~~~~~~~~~ 491 (528)
.++++. +|+...
T Consensus 134 ~~l~~~-gf~~~~ 145 (170)
T 3q87_B 134 ARLEER-GYGTRI 145 (170)
T ss_dssp HHHHHT-TCEEEE
T ss_pred HHHHHC-CCcEEE
Confidence 667654 465543
No 171
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.19 E-value=1.9e-11 Score=123.62 Aligned_cols=107 Identities=16% Similarity=0.161 Sum_probs=74.8
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcC----ChHHHHHHHHHHHHcCCCccEEEEcC-ccccccccCCCCC
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDI----NKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKC 407 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~----s~~~l~~~~~n~~~~g~~~~i~~~~~-D~~~~~~~~~~~f 407 (528)
+.+|.+|||+|||||++|..++++ ++|+|+|+ ++.+++.+ ..+..+. ++++++++ |+..++ ..+|
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~~~~-~~v~~~~~~D~~~l~---~~~f 149 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPI--PMSTYGW-NLVRLQSGVDVFFIP---PERC 149 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCC--CCCSTTG-GGEEEECSCCTTTSC---CCCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHH--HhhhcCC-CCeEEEeccccccCC---cCCC
Confidence 467889999999999999999875 57999999 55443211 1112222 35899999 988764 2589
Q ss_pred CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 408 DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 408 D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
|+|++|.+++ +|.. ...... +..+|..+.++|||||.++..+
T Consensus 150 D~V~sd~~~~-~g~~-------------~~d~~~--~l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 150 DTLLCDIGES-SPNP-------------TVEAGR--TLRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp SEEEECCCCC-CSSH-------------HHHHHH--HHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEECCccc-cCcc-------------hhhHHH--HHHHHHHHHHHhCCCCEEEEEe
Confidence 9999998885 4541 111111 1146888999999999988643
No 172
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.19 E-value=1.2e-11 Score=127.28 Aligned_cols=113 Identities=14% Similarity=0.175 Sum_probs=89.3
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
..++.+|||+|||+|..+..+++. +..+|+|+|+|+ +++.++++++.+|+.++++++++|+.++.. ..++||+|++
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~Iis 139 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVEL-PVEKVDIIIS 139 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC-SSSCEEEEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccC-CCCceEEEEE
Confidence 356889999999999999999986 456999999995 999999999999999889999999988742 2478999999
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
+++..... .. .. ...++..+.++|||||+++...+++
T Consensus 140 ~~~~~~l~---~~---------~~-------~~~~l~~~~r~LkpgG~li~~~~~~ 176 (349)
T 3q7e_A 140 EWMGYCLF---YE---------SM-------LNTVLHARDKWLAPDGLIFPDRATL 176 (349)
T ss_dssp CCCBBTBT---BT---------CC-------HHHHHHHHHHHEEEEEEEESCEEEE
T ss_pred cccccccc---Cc---------hh-------HHHHHHHHHHhCCCCCEEccccceE
Confidence 86543211 00 11 1245888899999999998665553
No 173
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.18 E-value=4.9e-11 Score=116.60 Aligned_cols=116 Identities=17% Similarity=0.223 Sum_probs=89.4
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCC
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 405 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~ 405 (528)
.+...+.+.++.+|||+|||+|..+..++... ..+|+|+|+|+.+++.+++++... .+++++++|+..++. ..+
T Consensus 46 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~-~~~ 119 (266)
T 3ujc_A 46 KILSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEF-PEN 119 (266)
T ss_dssp HHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCC-CTT
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCC-CCC
Confidence 34445567789999999999999999999875 469999999999999999877654 358999999988642 247
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
+||+|++.... ..- ...+ ...+|+.+.++|||||++++++..
T Consensus 120 ~fD~v~~~~~l------~~~-------~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 120 NFDLIYSRDAI------LAL-------SLEN-------KNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp CEEEEEEESCG------GGS-------CHHH-------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cEEEEeHHHHH------Hhc-------ChHH-------HHHHHHHHHHHcCCCCEEEEEEec
Confidence 89999974322 111 1122 245699999999999999988754
No 174
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.18 E-value=2.1e-11 Score=118.02 Aligned_cols=114 Identities=18% Similarity=0.178 Sum_probs=85.1
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc-cCCCCCCEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-NSTVKCDKVL 411 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~-~~~~~fD~Vl 411 (528)
+.++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.++++++..+ . +++++++|+.++.. ...++||+|+
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~-~-~v~~~~~d~~~~~~~~~~~~fD~V~ 133 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQT-H-KVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTS--CEEEEEEEECCHHHHHHHHHHGGGCS-S-EEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhc--CCCeEEEEcCCHHHHHHHHHHHHhcC-C-CeEEEecCHHHhhcccCCCceEEEE
Confidence 467889999999999999999753 23489999999999999999988877 3 48999999988632 2246899999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
+|.-. . . .++. .. .....+++++.++|||||+|++.+++
T Consensus 134 ~d~~~--~-~---~~~~----~~-------~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 134 YDTYP--L-S---EETW----HT-------HQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp ECCCC--C-B---GGGT----TT-------HHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ECCcc--c-c---hhhh----hh-------hhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 97211 0 0 0110 00 11244689999999999999986654
No 175
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.18 E-value=2.5e-10 Score=108.08 Aligned_cols=126 Identities=17% Similarity=0.058 Sum_probs=91.5
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
..++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.+++++ + +.++++|+..+. ..++||+|++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~----~~~~~~d~~~~~--~~~~fD~v~~ 108 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL---G----RPVRTMLFHQLD--AIDAYDAVWA 108 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH---T----SCCEECCGGGCC--CCSCEEEEEE
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc---C----CceEEeeeccCC--CCCcEEEEEe
Confidence 456889999999999999999985 469999999999999999887 2 456788888776 3578999997
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCch-----------hhHHHHHHHH
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPE-----------ENEERVEAFL 481 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~-----------Ene~~v~~~l 481 (528)
.... ..- ...+ ...+|+.+.++|||||+++++++..... -..+.+..++
T Consensus 109 ~~~l------~~~-------~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (211)
T 3e23_A 109 HACL------LHV-------PRDE-------LADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARY 168 (211)
T ss_dssp CSCG------GGS-------CHHH-------HHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHH
T ss_pred cCch------hhc-------CHHH-------HHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHH
Confidence 5322 111 1122 2456999999999999999886654321 1344555666
Q ss_pred hhCCC-ceEec
Q 009708 482 LRHPE-FSIDP 491 (528)
Q Consensus 482 ~~~~~-~~~~~ 491 (528)
++. + |+++.
T Consensus 169 ~~a-G~f~~~~ 178 (211)
T 3e23_A 169 AEA-GTWASVA 178 (211)
T ss_dssp HHH-CCCSEEE
T ss_pred HhC-CCcEEEE
Confidence 654 4 65543
No 176
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.18 E-value=3.8e-11 Score=121.81 Aligned_cols=130 Identities=14% Similarity=0.099 Sum_probs=92.2
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc--CC-CccEEEEcCccccccccCCCCCCEEE
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADNSTVKCDKVL 411 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~--g~-~~~i~~~~~D~~~~~~~~~~~fD~Vl 411 (528)
.+.+|||+|||+|+.+..+++. .+..+|+++|+++.+++.+++++... ++ ..+++++++|+..+.....++||+|+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKH-ESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTC-TTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 4579999999999999999875 34579999999999999999998764 44 34699999999886543457899999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC-chhhHHHHHHHHhh
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID-PEENEERVEAFLLR 483 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~-~~Ene~~v~~~l~~ 483 (528)
+|++.. .+ |. .. + ...++++.+.++|+|||+|+..+.+.. ..+....+..++++
T Consensus 187 ~d~~~~-~~-----~~-------~~---l--~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 241 (314)
T 2b2c_A 187 TDSSDP-VG-----PA-------ES---L--FGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRK 241 (314)
T ss_dssp ECCC-------------------------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHH
T ss_pred EcCCCC-CC-----cc-------hh---h--hHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHH
Confidence 998641 11 00 00 0 125679999999999999998875543 22333344455554
No 177
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.18 E-value=1.2e-10 Score=114.90 Aligned_cols=117 Identities=15% Similarity=0.023 Sum_probs=81.4
Q ss_pred hHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc
Q 009708 323 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 402 (528)
Q Consensus 323 ~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~ 402 (528)
....+...+.+.++.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.+++++....+. ..+...+.. ....
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~~v~--~~~~~~~~~-~~~~ 106 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADRCVT--IDLLDITAE-IPKE 106 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSSCCE--EEECCTTSC-CCGG
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhccce--eeeeecccc-cccc
Confidence 3445566778889999999999999999999985 469999999999999999987655211 222222220 0111
Q ss_pred CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 403 STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 403 ~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
..++||+|+++.... + ....+ ....+..+.++| |||+|+++..
T Consensus 107 ~~~~fD~Vv~~~~l~------~-------~~~~~-------~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 107 LAGHFDFVLNDRLIN------R-------FTTEE-------ARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp GTTCCSEEEEESCGG------G-------SCHHH-------HHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cCCCccEEEEhhhhH------h-------CCHHH-------HHHHHHHHHHhC-cCcEEEEEec
Confidence 246899999875431 1 11122 234588888999 9999997754
No 178
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.17 E-value=1.4e-10 Score=109.96 Aligned_cols=113 Identities=15% Similarity=0.205 Sum_probs=86.8
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCC
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 405 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~ 405 (528)
++..+....++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++ .+..+ ++++++|+.++. ..+
T Consensus 37 ~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~~~-~~~~~~d~~~~~--~~~ 106 (218)
T 3ou2_A 37 ALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGLDN-VEFRQQDLFDWT--PDR 106 (218)
T ss_dssp HHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCCTT-EEEEECCTTSCC--CSS
T ss_pred HHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCCCC-eEEEecccccCC--CCC
Confidence 3333334677889999999999999999987 4699999999999999887 56554 899999998872 347
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
+||+|++.. ++..-++ . ....+|+.+.++|||||++++++...
T Consensus 107 ~~D~v~~~~------~l~~~~~-------~-------~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 107 QWDAVFFAH------WLAHVPD-------D-------RFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp CEEEEEEES------CGGGSCH-------H-------HHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ceeEEEEec------hhhcCCH-------H-------HHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 899999742 2222221 1 12456999999999999999988765
No 179
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.17 E-value=1.2e-10 Score=113.52 Aligned_cols=117 Identities=20% Similarity=0.173 Sum_probs=89.3
Q ss_pred ecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccc
Q 009708 320 QDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF 399 (528)
Q Consensus 320 Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~ 399 (528)
|......+...+.+.++.+|||+|||+|..+..++...+ ..+|+++|+|+.+++.++++ .. +++++++|+..+
T Consensus 18 ~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~-----~~-~~~~~~~d~~~~ 90 (259)
T 2p35_A 18 RTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR-----LP-NTNFGKADLATW 90 (259)
T ss_dssp GGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH-----ST-TSEEEECCTTTC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh-----CC-CcEEEECChhhc
Confidence 333344455566677888999999999999999998753 57899999999999999887 23 378999999887
Q ss_pred cccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 400 ADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 400 ~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
. ..++||+|++.... ...+ + ...+|+++.++|||||+|++++..
T Consensus 91 ~--~~~~fD~v~~~~~l------~~~~---------~-------~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 91 K--PAQKADLLYANAVF------QWVP---------D-------HLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp C--CSSCEEEEEEESCG------GGST---------T-------HHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred C--ccCCcCEEEEeCch------hhCC---------C-------HHHHHHHHHHhcCCCeEEEEEeCC
Confidence 6 34789999985332 1111 1 234699999999999999988754
No 180
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.17 E-value=6.9e-11 Score=123.19 Aligned_cols=112 Identities=17% Similarity=0.325 Sum_probs=88.2
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc-----C-CC-ccEEEEcCcccccc-----
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-----Q-VN-SVIRTIHADLRTFA----- 400 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~-----g-~~-~~i~~~~~D~~~~~----- 400 (528)
+.++.+|||+|||+|..+..+++..++.++|+++|+|+.+++.++++++.+ | .. .+++++++|+.++.
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 457889999999999999999998766789999999999999999998876 4 31 35999999998762
Q ss_pred ccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 401 DNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 401 ~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
+...++||+|+++... ...++ ...+|+++.++|||||+|++++.
T Consensus 161 ~~~~~~fD~V~~~~~l------~~~~d----------------~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVC------NLSTN----------------KLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp CCCTTCEEEEEEESCG------GGCSC----------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccch------hcCCC----------------HHHHHHHHHHHcCCCCEEEEEEe
Confidence 2224689999986433 11111 13569999999999999998753
No 181
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.16 E-value=7.3e-10 Score=102.59 Aligned_cols=135 Identities=14% Similarity=0.061 Sum_probs=95.1
Q ss_pred HHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCC
Q 009708 325 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 404 (528)
Q Consensus 325 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~ 404 (528)
.++..+ +.++.+|||+|||+|..+..++.. ..+++++|+++.+++.+++++. + ++++++|+..+.. ..
T Consensus 38 ~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~-----~-~~~~~~d~~~~~~-~~ 105 (195)
T 3cgg_A 38 RLIDAM--APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFP-----E-ARWVVGDLSVDQI-SE 105 (195)
T ss_dssp HHHHHH--SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCT-----T-SEEEECCTTTSCC-CC
T ss_pred HHHHHh--ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCC-----C-CcEEEcccccCCC-CC
Confidence 344444 357889999999999999999886 4699999999999999988752 2 6789999987542 24
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhC
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRH 484 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~ 484 (528)
++||+|++++++. .. ....+ ...+|+.+.++|+|||++++++..... -..+.+...+.+.
T Consensus 106 ~~~D~i~~~~~~~-----~~-------~~~~~-------~~~~l~~~~~~l~~~G~l~~~~~~~~~-~~~~~~~~~l~~~ 165 (195)
T 3cgg_A 106 TDFDLIVSAGNVM-----GF-------LAEDG-------REPALANIHRALGADGRAVIGFGAGRG-WVFGDFLEVAERV 165 (195)
T ss_dssp CCEEEEEECCCCG-----GG-------SCHHH-------HHHHHHHHHHHEEEEEEEEEEEETTSS-CCHHHHHHHHHHH
T ss_pred CceeEEEECCcHH-----hh-------cChHH-------HHHHHHHHHHHhCCCCEEEEEeCCCCC-cCHHHHHHHHHHc
Confidence 6899999976551 11 11122 245699999999999999987654332 1233455555543
Q ss_pred CCceEecC
Q 009708 485 PEFSIDPA 492 (528)
Q Consensus 485 ~~~~~~~~ 492 (528)
+|++...
T Consensus 166 -Gf~~~~~ 172 (195)
T 3cgg_A 166 -GLELENA 172 (195)
T ss_dssp -TEEEEEE
T ss_pred -CCEEeee
Confidence 5666543
No 182
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.16 E-value=7e-11 Score=118.44 Aligned_cols=116 Identities=16% Similarity=0.199 Sum_probs=83.7
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCC----------------------------
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN---------------------------- 386 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~---------------------------- 386 (528)
++.+|||+|||+|..+..++..++ ..+|+|+|+|+.+++.++++++..+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 578999999999999999999864 469999999999999999998766532
Q ss_pred -----------------------------ccEEEEcCccccccc----cCCCCCCEEEEcCCCCCCccccCCchhhccCC
Q 009708 387 -----------------------------SVIRTIHADLRTFAD----NSTVKCDKVLLDAPCSGLGVLSKRADLRWNRR 433 (528)
Q Consensus 387 -----------------------------~~i~~~~~D~~~~~~----~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~ 433 (528)
++++++++|+..... ...+.||+|++.... .|
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl------------~~--- 189 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLT------------KW--- 189 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCH------------HH---
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHH------------HH---
Confidence 469999999875431 124789999973211 11
Q ss_pred HHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 434 LEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 434 ~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
-.+..-.....++++.+.++|||||+|++.+..
T Consensus 190 -ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 190 -VHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred -hhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 011112224466799999999999999987554
No 183
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.16 E-value=3e-10 Score=119.71 Aligned_cols=115 Identities=14% Similarity=0.142 Sum_probs=86.1
Q ss_pred HHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHH-------HHHHHHcCCC-ccEEEEcCcccc
Q 009708 327 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRIL-------NETAKLHQVN-SVIRTIHADLRT 398 (528)
Q Consensus 327 ~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~-------~~n~~~~g~~-~~i~~~~~D~~~ 398 (528)
+...+.+.+|++|||+|||+|..++.+|...+ ..+|+|+|+++.+++.+ ++|++..|+. .+++++++|...
T Consensus 234 ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~ 312 (433)
T 1u2z_A 234 VYQQCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV 312 (433)
T ss_dssp HHHHTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred HHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccc
Confidence 44566788899999999999999999998753 46899999999999988 9999999943 348998876542
Q ss_pred cc-c--cCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 399 FA-D--NSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 399 ~~-~--~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
.. . .....||+|+++..+.+ .++ ...|..+.+.|||||+||...
T Consensus 313 ~~~~~~~~~~~FDvIvvn~~l~~----------------~d~-------~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 313 DNNRVAELIPQCDVILVNNFLFD----------------EDL-------NKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp TCHHHHHHGGGCSEEEECCTTCC----------------HHH-------HHHHHHHHTTCCTTCEEEESS
T ss_pred cccccccccCCCCEEEEeCcccc----------------ccH-------HHHHHHHHHhCCCCeEEEEee
Confidence 10 0 11257999998644311 122 234788899999999999653
No 184
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.16 E-value=6.2e-11 Score=111.97 Aligned_cols=122 Identities=17% Similarity=0.175 Sum_probs=88.7
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++++.. .. +++++++|+..+.. ..++||+|+++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~--~~-~i~~~~~d~~~~~~-~~~~fD~v~~~ 114 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLG-G-FPNVTSVDYSSVVVAAMQACYAH--VP-QLRWETMDVRKLDF-PSASFDVVLEK 114 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHT-T-CCCEEEEESCHHHHHHHHHHTTT--CT-TCEEEECCTTSCCS-CSSCEEEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhccc--CC-CcEEEEcchhcCCC-CCCcccEEEEC
Confidence 56889999999999999999886 2 23899999999999999998764 23 48899999987632 24689999987
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
.+... +.......|....... .....+++.+.++|||||++++.+++.
T Consensus 115 ~~~~~---~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 115 GTLDA---LLAGERDPWTVSSEGV----HTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp SHHHH---HTTTCSCTTSCCHHHH----HHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cchhh---hccccccccccccchh----HHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 66421 1101112343332322 233567999999999999999887653
No 185
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.15 E-value=5.5e-11 Score=119.79 Aligned_cols=90 Identities=22% Similarity=0.310 Sum_probs=76.6
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC--
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-- 403 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~-- 403 (528)
.+...+.+.+|.+|||+|||+|+.+..+++.++ .++|+|+|+|+.+++.+++|++.+| . +++++++|+.++....
T Consensus 17 e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-~-~v~~v~~d~~~l~~~l~~ 93 (301)
T 1m6y_A 17 EVIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-D-RVSLFKVSYREADFLLKT 93 (301)
T ss_dssp HHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-T-TEEEEECCGGGHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-C-cEEEEECCHHHHHHHHHh
Confidence 455677888899999999999999999999864 6899999999999999999999888 4 5999999998764211
Q ss_pred --CCCCCEEEEcCCCCC
Q 009708 404 --TVKCDKVLLDAPCSG 418 (528)
Q Consensus 404 --~~~fD~Vl~D~Pcsg 418 (528)
..+||.|++|+|||+
T Consensus 94 ~g~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 94 LGIEKVDGILMDLGVST 110 (301)
T ss_dssp TTCSCEEEEEEECSCCH
T ss_pred cCCCCCCEEEEcCccch
Confidence 147999999999873
No 186
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.15 E-value=2.3e-10 Score=111.30 Aligned_cols=108 Identities=22% Similarity=0.259 Sum_probs=84.0
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEE
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 411 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl 411 (528)
...++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.+++++...+.. ++++++|+..+.. ..+||+|+
T Consensus 38 ~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~--v~~~~~d~~~~~~--~~~fD~v~ 110 (252)
T 1wzn_A 38 AKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNLK--IEFLQGDVLEIAF--KNEFDAVT 110 (252)
T ss_dssp CSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCC--CEEEESCGGGCCC--CSCEEEEE
T ss_pred cccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCCc--eEEEECChhhccc--CCCccEEE
Confidence 3456789999999999999999885 469999999999999999999988763 8899999988653 36799999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
+.... ... ....+ ...+++.+.++|||||.+++..
T Consensus 111 ~~~~~--~~~----------~~~~~-------~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 111 MFFST--IMY----------FDEED-------LRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp ECSSG--GGG----------SCHHH-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCCc--hhc----------CCHHH-------HHHHHHHHHHHcCCCeEEEEec
Confidence 63211 011 11122 3456999999999999998754
No 187
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.15 E-value=1.2e-10 Score=111.66 Aligned_cols=112 Identities=19% Similarity=0.210 Sum_probs=87.6
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCC----ccEEEEcCccccccccCCCCCCE
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN----SVIRTIHADLRTFADNSTVKCDK 409 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~----~~i~~~~~D~~~~~~~~~~~fD~ 409 (528)
.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...++. .+++++++|+..+.. ..++||+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~ 104 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF-HDSSFDF 104 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS-CTTCEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC-CCCceeE
Confidence 46889999999999999999986 469999999999999999999888773 248899999987653 2478999
Q ss_pred EEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 410 VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 410 Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
|++.... ..-+ ++.. ...+|+.+.++|||||+|+++++..
T Consensus 105 v~~~~~l------~~~~------~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 105 AVMQAFL------TSVP------DPKE-------RSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp EEEESCG------GGCC------CHHH-------HHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred EEEcchh------hcCC------CHHH-------HHHHHHHHHHHcCCCeEEEEEECCc
Confidence 9986333 1111 1222 2356999999999999999887654
No 188
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.14 E-value=3.5e-11 Score=122.87 Aligned_cols=113 Identities=19% Similarity=0.245 Sum_probs=88.0
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEE
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 411 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl 411 (528)
...++.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++.+|+.++++++++|+.++.. ..++||+|+
T Consensus 35 ~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~D~Iv 110 (328)
T 1g6q_1 35 DLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL-PFPKVDIII 110 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC-SSSCEEEEE
T ss_pred hhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC-CCCcccEEE
Confidence 3456789999999999999998875 35699999999 5999999999999998889999999987642 236899999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
++++..... .. ..+ ..++..+.++|||||+++..+++
T Consensus 111 s~~~~~~l~---~~---------~~~-------~~~l~~~~~~LkpgG~li~~~~~ 147 (328)
T 1g6q_1 111 SEWMGYFLL---YE---------SMM-------DTVLYARDHYLVEGGLIFPDKCS 147 (328)
T ss_dssp ECCCBTTBS---TT---------CCH-------HHHHHHHHHHEEEEEEEESCEEE
T ss_pred EeCchhhcc---cH---------HHH-------HHHHHHHHhhcCCCeEEEEeece
Confidence 987753211 00 111 23578888999999999855544
No 189
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.14 E-value=9.1e-11 Score=118.50 Aligned_cols=131 Identities=14% Similarity=0.137 Sum_probs=92.0
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc---CCCccEEEEcCcccccccc-CCCCCCE
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH---QVNSVIRTIHADLRTFADN-STVKCDK 409 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~---g~~~~i~~~~~D~~~~~~~-~~~~fD~ 409 (528)
.++.+|||+|||+|+.+..+++. .+..+|+++|+|+.+++.+++++... ....+++++++|+..+... ..++||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRH-GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 45679999999999999999875 34579999999999999999987431 2234599999999887643 3478999
Q ss_pred EEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC-CchhhHHHHHHHHhh
Q 009708 410 VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI-DPEENEERVEAFLLR 483 (528)
Q Consensus 410 Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~-~~~Ene~~v~~~l~~ 483 (528)
|++|++... + |. ..+ .+.++++.+.++|||||+|++.+.+. ...+....+...+++
T Consensus 173 Ii~d~~~~~-~-----~~-------~~l-----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 229 (304)
T 3bwc_A 173 VIIDTTDPA-G-----PA-------SKL-----FGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRE 229 (304)
T ss_dssp EEEECC---------------------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHH
T ss_pred EEECCCCcc-c-----cc-------hhh-----hHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHh
Confidence 999977521 1 00 000 12467899999999999999865542 222333344455554
No 190
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.14 E-value=4.9e-11 Score=119.64 Aligned_cols=119 Identities=16% Similarity=0.250 Sum_probs=89.6
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCC--ccEEEEcCccccccccC
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN--SVIRTIHADLRTFADNS 403 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~--~~i~~~~~D~~~~~~~~ 403 (528)
.+...+.+.++ +|||+|||+|..+..+++. +.+|+|+|+|+.+++.+++++...++. .+++++++|+..++.
T Consensus 74 ~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 147 (299)
T 3g2m_A 74 EFATRTGPVSG-PVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-- 147 (299)
T ss_dssp HHHHHHCCCCS-CEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC--
T ss_pred HHHHhhCCCCC-cEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc--
Confidence 34444555444 9999999999999999875 468999999999999999999987742 348999999998754
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
.++||.|++.. +++.. .+..+ +..+|+++.++|||||+|++++....
T Consensus 148 ~~~fD~v~~~~-----~~~~~-------~~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 148 DKRFGTVVISS-----GSINE-------LDEAD-------RRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp SCCEEEEEECH-----HHHTT-------SCHHH-------HHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred CCCcCEEEECC-----ccccc-------CCHHH-------HHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 47899998621 11111 12222 34569999999999999998876643
No 191
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.13 E-value=4.2e-11 Score=114.22 Aligned_cols=114 Identities=15% Similarity=0.200 Sum_probs=82.9
Q ss_pred hcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHH----HHcCCCccEEEEcCccccccccCCC
Q 009708 330 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETA----KLHQVNSVIRTIHADLRTFADNSTV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~----~~~g~~~~i~~~~~D~~~~~~~~~~ 405 (528)
.+.+.++.+|||+|||+|..+..+++. .+..+|+|+|+|+.+++.+.+++ ...++++ ++++++|+.+++.. ..
T Consensus 22 ~l~~~~~~~vLDiGcG~G~~~~~la~~-~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~-v~~~~~d~~~l~~~-~~ 98 (218)
T 3mq2_A 22 QLRSQYDDVVLDVGTGDGKHPYKVARQ-NPSRLVVALDADKSRMEKISAKAAAKPAKGGLPN-LLYLWATAERLPPL-SG 98 (218)
T ss_dssp HHHTTSSEEEEEESCTTCHHHHHHHHH-CTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTT-EEEEECCSTTCCSC-CC
T ss_pred HhhccCCCEEEEecCCCCHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCc-eEEEecchhhCCCC-CC
Confidence 345678899999999999999999997 34689999999999888644333 3456665 89999999886532 23
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
. |.|++..+.. .........+..+++++.++|||||+++++
T Consensus 99 ~-d~v~~~~~~~-----------------~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 99 V-GELHVLMPWG-----------------SLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp E-EEEEEESCCH-----------------HHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred C-CEEEEEccch-----------------hhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 4 8777655431 111111222356799999999999999975
No 192
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.13 E-value=1.8e-10 Score=115.18 Aligned_cols=131 Identities=13% Similarity=0.177 Sum_probs=94.1
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcC--C-CccEEEEcCccccccccCCCCCCEE
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ--V-NSVIRTIHADLRTFADNSTVKCDKV 410 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g--~-~~~i~~~~~D~~~~~~~~~~~fD~V 410 (528)
.++.+|||+|||+|+.+..+++. .+..+|+++|+++.+++.+++++...+ + ..+++++++|+..+.....++||+|
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 35679999999999999999875 345799999999999999999886543 2 2359999999988654335789999
Q ss_pred EEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC-CchhhHHHHHHHHhh
Q 009708 411 LLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI-DPEENEERVEAFLLR 483 (528)
Q Consensus 411 l~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~-~~~Ene~~v~~~l~~ 483 (528)
++|++.. .|. . ..+ ...++++.+.+.|+|||+++..+++. ...+....+...+++
T Consensus 156 i~d~~~~-~~~-----~-------~~l-----~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~ 211 (283)
T 2i7c_A 156 IVDSSDP-IGP-----A-------ETL-----FNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKK 211 (283)
T ss_dssp EEECCCT-TTG-----G-------GGG-----SSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHT
T ss_pred EEcCCCC-CCc-----c-------hhh-----hHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHH
Confidence 9997652 111 0 000 11456899999999999999887763 232322333344444
No 193
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.13 E-value=1e-10 Score=119.75 Aligned_cols=136 Identities=13% Similarity=0.112 Sum_probs=98.4
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcC---CCc----cEEEEcCcccccccc---CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ---VNS----VIRTIHADLRTFADN---ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g---~~~----~i~~~~~D~~~~~~~---~~ 404 (528)
.+.+|||+|||.|+.+..+++. + ..+|++||+++..++.+++++...+ +++ +++++.+|+..+... ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~-~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 4579999999999999998876 3 4799999999999999999976432 222 599999999998753 25
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhC
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRH 484 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~ 484 (528)
++||+|++|+|-...|. .| ..+ -..+.+..+++.+.+.|+|||+++..+|+.+..+-....+..+.+.
T Consensus 266 ~~fDvII~D~~d~P~~~---~p--------~~L-~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~ 333 (364)
T 2qfm_A 266 REFDYVINDLTAVPIST---SP--------EED-STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRL 333 (364)
T ss_dssp CCEEEEEEECCSSCCCC---C-------------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTS
T ss_pred CCceEEEECCCCcccCc---Cc--------hhh-hHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHh
Confidence 78999999997521111 11 111 1134455667777999999999999999988755545555545443
No 194
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.12 E-value=5.1e-11 Score=123.45 Aligned_cols=111 Identities=18% Similarity=0.343 Sum_probs=86.3
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.+|.+|||+|||+|..++.+|+. +..+|+|||.|+ +++.++++++.+|+.++|+++++|+.++.. +++||+|+++
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a--GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l--pe~~DvivsE 156 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA--GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL--PEQVDAIVSE 156 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC--SSCEEEEECC
T ss_pred cCCCEEEEeCCCccHHHHHHHHh--CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC--CccccEEEee
Confidence 36889999999999999888874 456999999996 789999999999999999999999988643 4789999986
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
.-- .+.+.- ..+ ..++....++|||||.++-+.|++
T Consensus 157 ~~~--~~l~~e----------~~l-------~~~l~a~~r~Lkp~G~~iP~~atl 192 (376)
T 4hc4_A 157 WMG--YGLLHE----------SML-------SSVLHARTKWLKEGGLLLPASAEL 192 (376)
T ss_dssp CCB--TTBTTT----------CSH-------HHHHHHHHHHEEEEEEEESCEEEE
T ss_pred ccc--cccccc----------chh-------hhHHHHHHhhCCCCceECCccceE
Confidence 432 222111 112 234777778999999998666653
No 195
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.12 E-value=1.7e-10 Score=117.99 Aligned_cols=117 Identities=15% Similarity=0.204 Sum_probs=88.3
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc--CC-CccEEEEcCccccccccC-CCCCC
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADNS-TVKCD 408 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~--g~-~~~i~~~~~D~~~~~~~~-~~~fD 408 (528)
...+.+|||+|||+|..+..+++. .+..+|+++|+|+.+++.+++++... |+ ..+++++++|+..+.... .++||
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~-~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARH-ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 345679999999999999999875 34579999999999999999998764 44 235999999998764322 36899
Q ss_pred EEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 409 KVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 409 ~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
+|++|++... +. ++ . -.+.++++.+.++|+|||+|+..+.+.
T Consensus 197 lIi~d~~~p~-~~----~~--------~-----l~~~~~l~~~~~~LkpgG~lv~~~~~~ 238 (334)
T 1xj5_A 197 AVIVDSSDPI-GP----AK--------E-----LFEKPFFQSVARALRPGGVVCTQAESL 238 (334)
T ss_dssp EEEECCCCTT-SG----GG--------G-----GGSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred EEEECCCCcc-Cc----ch--------h-----hhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 9999976311 10 00 0 012457899999999999999875443
No 196
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.12 E-value=1.4e-10 Score=109.46 Aligned_cols=111 Identities=17% Similarity=0.215 Sum_probs=83.7
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
..++.+|||+|||+|..++.++.. .+.+|+++|+|+.+++.+++++...+. +++++++|+..++. ..++||+|++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-~~~~fD~v~~ 95 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENNF--KLNISKGDIRKLPF-KDESMSFVYS 95 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHTC--CCCEEECCTTSCCS-CTTCEEEEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEECchhhCCC-CCCceeEEEE
Confidence 456789999999999986555443 246999999999999999999988774 37889999987642 2468999997
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
.... .. ....+ ...+++.+.++|||||++++++++.
T Consensus 96 ~~~l------~~-------~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 96 YGTI------FH-------MRKND-------VKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp CSCG------GG-------SCHHH-------HHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred cChH------Hh-------CCHHH-------HHHHHHHHHHHcCCCcEEEEEEecc
Confidence 4322 11 11122 3456999999999999999888764
No 197
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.12 E-value=1.6e-10 Score=117.32 Aligned_cols=117 Identities=13% Similarity=0.155 Sum_probs=87.0
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc--C-C-CccEEEEcCccccccccCCCCCCEE
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--Q-V-NSVIRTIHADLRTFADNSTVKCDKV 410 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~--g-~-~~~i~~~~~D~~~~~~~~~~~fD~V 410 (528)
.+.+|||+|||+|+.+..+++. .+..+|+++|+++.+++.+++++... + + ..+++++++|+..+.....++||+|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKH-PTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 4579999999999999999875 34579999999999999999998752 2 2 3459999999988654345789999
Q ss_pred EEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 411 LLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 411 l~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
++|++... +. ..|. ..+ ...++++.+.++|||||+|+..+.+
T Consensus 156 i~d~~~~~-~~--~~~~-------~~l-----~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 156 IIDLTDPV-GE--DNPA-------RLL-----YTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEECCCCB-ST--TCGG-------GGG-----SSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCcc-cc--cCcc-------hhc-----cHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99977521 00 0010 000 0245689999999999999977544
No 198
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.11 E-value=2.3e-10 Score=110.32 Aligned_cols=107 Identities=17% Similarity=0.157 Sum_probs=83.5
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 414 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~ 414 (528)
++.+|||+|||+|..+..+++. ..+++++|+++.+++.+++++...+. +++++++|+..+... ++||+|++..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~--~~fD~v~~~~ 109 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNIN--RKFDLITCCL 109 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCS--CCEEEEEECT
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCcc--CCceEEEEcC
Confidence 6789999999999999999875 46899999999999999999998876 388999999886532 6899999743
Q ss_pred CCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 415 PCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 415 Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
- ++..- .+..+ ...+|+.+.++|||||++++++.
T Consensus 110 ~-----~l~~~------~~~~~-------~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 110 D-----STNYI------IDSDD-------LKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp T-----GGGGC------CSHHH-------HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred c-----ccccc------CCHHH-------HHHHHHHHHHhcCCCcEEEEEec
Confidence 0 11111 11122 24569999999999999997543
No 199
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.11 E-value=3.1e-10 Score=126.99 Aligned_cols=127 Identities=17% Similarity=0.130 Sum_probs=93.3
Q ss_pred HHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcC-----------------------------------------CCcE
Q 009708 324 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLS-----------------------------------------GQGL 362 (528)
Q Consensus 324 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~-----------------------------------------~~~~ 362 (528)
+..++.+....++..|||.|||+|++.+.+|.... ...+
T Consensus 179 Aa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~ 258 (703)
T 3v97_A 179 AAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSH 258 (703)
T ss_dssp HHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCcc
Confidence 34455566777889999999999999998887531 1257
Q ss_pred EEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC-CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHH
Q 009708 363 VYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELK 441 (528)
Q Consensus 363 v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~-~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~ 441 (528)
|+|+|+++.+++.++.|++++|+.+.+++.++|+.++.... .++||+|++|||+.. -+ . +...+ .
T Consensus 259 i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~-Rl-g---------~~~~l---~ 324 (703)
T 3v97_A 259 FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGE-RL-D---------SEPAL---I 324 (703)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC--------------CCHHH---H
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccc-cc-c---------chhHH---H
Confidence 99999999999999999999999988999999999875332 237999999999931 10 0 11222 2
Q ss_pred HHHHHHHHHHhccCcCCCEEEEEc
Q 009708 442 ILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 442 ~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
.++.. +...++.+.|||.+++.|
T Consensus 325 ~ly~~-l~~~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 325 ALHSL-LGRIMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHHH-HHHHHHHHCTTCEEEEEE
T ss_pred HHHHH-HHHHHHhhCCCCeEEEEe
Confidence 33333 455556667899888664
No 200
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.11 E-value=2e-10 Score=112.01 Aligned_cols=111 Identities=16% Similarity=0.198 Sum_probs=85.0
Q ss_pred HHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCC
Q 009708 327 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVK 406 (528)
Q Consensus 327 ~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~ 406 (528)
+...+...++.+|||+|||+|..+..+++. +..+|+++|+|+.+++.+++++. ..+++++++|+..++. ..++
T Consensus 36 l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~-~~~~ 108 (253)
T 3g5l_A 36 LKKMLPDFNQKTVLDLGCGFGWHCIYAAEH--GAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAI-EPDA 108 (253)
T ss_dssp HHTTCCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCC-CTTC
T ss_pred HHHhhhccCCCEEEEECCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCC-CCCC
Confidence 344556667889999999999999999986 23399999999999999988765 2348999999987653 2478
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
||+|++.... ..-++ ...+|+.+.++|||||+|++++.
T Consensus 109 fD~v~~~~~l------~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 109 YNVVLSSLAL------HYIAS----------------FDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp EEEEEEESCG------GGCSC----------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEEchhh------hhhhh----------------HHHHHHHHHHHcCCCcEEEEEeC
Confidence 9999985322 11111 23469999999999999998754
No 201
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.11 E-value=1.9e-10 Score=116.06 Aligned_cols=112 Identities=12% Similarity=0.072 Sum_probs=77.4
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCc-----cEEEEcCcc------ccccc-c
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS-----VIRTIHADL------RTFAD-N 402 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~-----~i~~~~~D~------~~~~~-~ 402 (528)
+|.+|||+|||+|+.+..++.. +.++|+|+|+|+.+++.|++++...+... .+++.+.|+ .++.. .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 5789999999999876665553 34699999999999999999988776531 156667766 22221 1
Q ss_pred CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 403 STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 403 ~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
..++||+|+|-- ++ .|..+..+. ..+|+++.++|||||+++.+|+.
T Consensus 126 ~~~~FD~V~~~~------~l------hy~~~~~~~-------~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 126 YFGKFNIIDWQF------AI------HYSFHPRHY-------ATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp CSSCEEEEEEES------CG------GGTCSTTTH-------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCCeeEEEECc------hH------HHhCCHHHH-------HHHHHHHHHHcCCCCEEEEEeCC
Confidence 236899998631 11 111111121 35699999999999999988763
No 202
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.11 E-value=5.7e-11 Score=110.81 Aligned_cols=109 Identities=17% Similarity=0.087 Sum_probs=82.2
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.+.++|||+|||+|..++.++... +..+++|+|+|+.+++.+++|+.++|+.+++++ .|..... .++.||+|++-
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~--~~~~~DvVLa~ 122 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDV--YKGTYDVVFLL 122 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHH--TTSEEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccC--CCCCcChhhHh
Confidence 346699999999999999998763 456999999999999999999999999865666 5554432 34679999962
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEE-EEcCCCC
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLV-YSTCSID 469 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lv-ysTcs~~ 469 (528)
+-+.-+ ..++..+..+++.|+|||.+| +-|-|+.
T Consensus 123 ---------------------k~LHlL-~~~~~al~~v~~~L~pggvfISfptksl~ 157 (200)
T 3fzg_A 123 ---------------------KMLPVL-KQQDVNILDFLQLFHTQNFVISFPIKSLS 157 (200)
T ss_dssp ---------------------TCHHHH-HHTTCCHHHHHHTCEEEEEEEEEECCCCC
T ss_pred ---------------------hHHHhh-hhhHHHHHHHHHHhCCCCEEEEeChHHhc
Confidence 122233 445556668999999999888 4445544
No 203
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.11 E-value=2.5e-10 Score=110.14 Aligned_cols=108 Identities=24% Similarity=0.323 Sum_probs=82.9
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.++.+|||+|||+|..+..+++. .+|+++|+|+.+++.+++++...+. +++++++|+..+.. .++||+|++.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--~~~fD~v~~~ 103 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNR--HVDFWVQDMRELEL--PEPVDAITIL 103 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTC--CCEEEECCGGGCCC--SSCEEEEEEC
T ss_pred CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCC--ceEEEEcChhhcCC--CCCcCEEEEe
Confidence 35689999999999999988764 6899999999999999999988773 37899999987653 3689999985
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
..+ +.. ..+..+. ..+++.+.++|||||++++++.+
T Consensus 104 ~~~-----~~~------~~~~~~~-------~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 104 CDS-----LNY------LQTEADV-------KQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp TTG-----GGG------CCSHHHH-------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCc-----hhh------cCCHHHH-------HHHHHHHHHhcCCCeEEEEEcCC
Confidence 322 111 1122222 34689999999999999976543
No 204
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.10 E-value=1.9e-10 Score=104.93 Aligned_cols=125 Identities=16% Similarity=0.240 Sum_probs=89.4
Q ss_pred hcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCE
Q 009708 330 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 409 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~ 409 (528)
.+.+.++.+|||+|||+|..+..+++.. .+|+++|+++.+++.++++ .+ +++++++| ..+ ..++||+
T Consensus 12 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~~-~v~~~~~d-~~~---~~~~~D~ 78 (170)
T 3i9f_A 12 NIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----FD-SVITLSDP-KEI---PDNSVDF 78 (170)
T ss_dssp HHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----CT-TSEEESSG-GGS---CTTCEEE
T ss_pred hcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----CC-CcEEEeCC-CCC---CCCceEE
Confidence 3456778899999999999999998763 4999999999999999888 33 48899999 222 2468999
Q ss_pred EEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchh---------hHHHHHHH
Q 009708 410 VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEE---------NEERVEAF 480 (528)
Q Consensus 410 Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~E---------ne~~v~~~ 480 (528)
|++..... .-++ ...+++++.++|||||++++.+....... ..+.+..+
T Consensus 79 v~~~~~l~------~~~~----------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (170)
T 3i9f_A 79 ILFANSFH------DMDD----------------KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGW 136 (170)
T ss_dssp EEEESCST------TCSC----------------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHH
T ss_pred EEEccchh------cccC----------------HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHH
Confidence 99764431 1111 23568999999999999998876533211 13345555
Q ss_pred HhhCCCceEecC
Q 009708 481 LLRHPEFSIDPA 492 (528)
Q Consensus 481 l~~~~~~~~~~~ 492 (528)
++ +|++...
T Consensus 137 l~---Gf~~~~~ 145 (170)
T 3i9f_A 137 FS---NFVVEKR 145 (170)
T ss_dssp TT---TEEEEEE
T ss_pred Hh---CcEEEEc
Confidence 55 6766544
No 205
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.10 E-value=5.9e-10 Score=111.15 Aligned_cols=134 Identities=16% Similarity=0.165 Sum_probs=83.3
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcC-ChHHHHHHHHHH-----HHcCCC----ccEEEEcCcccc----
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDI-NKGRLRILNETA-----KLHQVN----SVIRTIHADLRT---- 398 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~-s~~~l~~~~~n~-----~~~g~~----~~i~~~~~D~~~---- 398 (528)
..+|.+|||+|||+|..++.++.. +.++|+++|+ ++.+++.+++|+ +.+|+. ++++++..|..+
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHH
T ss_pred hcCCCeEEEecccccHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHH
Confidence 356889999999999999988875 3459999999 899999999999 555654 347777554332
Q ss_pred cccc-CCCCCCEEEE-cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCc---C--CCEEEEEcCCCCch
Q 009708 399 FADN-STVKCDKVLL-DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVK---P--GGVLVYSTCSIDPE 471 (528)
Q Consensus 399 ~~~~-~~~~fD~Vl~-D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~Lk---p--GG~LvysTcs~~~~ 471 (528)
+... ...+||+|++ |+.+. ... ...+++.+.++|+ | ||+++++.+...+.
T Consensus 155 ~~~~~~~~~fD~Ii~~dvl~~----------------~~~-------~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~ 211 (281)
T 3bzb_A 155 LQRCTGLQRFQVVLLADLLSF----------------HQA-------HDALLRSVKMLLALPANDPTAVALVTFTHHRPH 211 (281)
T ss_dssp HHHHHSCSSBSEEEEESCCSC----------------GGG-------HHHHHHHHHHHBCCTTTCTTCEEEEEECC----
T ss_pred HHhhccCCCCCEEEEeCcccC----------------hHH-------HHHHHHHHHHHhcccCCCCCCEEEEEEEeeecc
Confidence 2110 1367999986 65541 011 2346888899999 9 99876654433221
Q ss_pred --hhHHHHHHHHhhCCC-ceEecC
Q 009708 472 --ENEERVEAFLLRHPE-FSIDPA 492 (528)
Q Consensus 472 --Ene~~v~~~l~~~~~-~~~~~~ 492 (528)
+....+...+.++ + |++..+
T Consensus 212 ~~~~~~~~~~~l~~~-G~f~v~~~ 234 (281)
T 3bzb_A 212 LAERDLAFFRLVNAD-GALIAEPW 234 (281)
T ss_dssp ----CTHHHHHHHHS-TTEEEEEE
T ss_pred cchhHHHHHHHHHhc-CCEEEEEe
Confidence 1112233344444 5 766544
No 206
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.09 E-value=5.3e-10 Score=106.28 Aligned_cols=105 Identities=17% Similarity=0.106 Sum_probs=79.0
Q ss_pred hcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccc---cccCCCC
Q 009708 330 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF---ADNSTVK 406 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~---~~~~~~~ 406 (528)
.+...++.+|||+|||+|..+..++.. +.+|+|+|+++.+++.++++ . .+.+++.|+.++ ......+
T Consensus 47 ~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~-~~~~~~~~~~~~~~~~~~~~~~ 116 (227)
T 3e8s_A 47 AILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA------G-AGEVHLASYAQLAEAKVPVGKD 116 (227)
T ss_dssp HHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT------C-SSCEEECCHHHHHTTCSCCCCC
T ss_pred HhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh------c-ccccchhhHHhhcccccccCCC
Confidence 333445689999999999999999875 46999999999999999877 2 256778888776 2222456
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
||+|++..... .++ ...+++.+.++|||||+|++++..
T Consensus 117 fD~v~~~~~l~-------~~~----------------~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 117 YDLICANFALL-------HQD----------------IIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp EEEEEEESCCC-------SSC----------------CHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ccEEEECchhh-------hhh----------------HHHHHHHHHHHhCCCeEEEEEecC
Confidence 99999864431 111 124689999999999999988753
No 207
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.09 E-value=3.8e-10 Score=109.67 Aligned_cols=113 Identities=15% Similarity=0.108 Sum_probs=86.4
Q ss_pred HHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCC
Q 009708 328 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 407 (528)
Q Consensus 328 ~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~f 407 (528)
...+...++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++++... .+++++++|+..+.. ..++|
T Consensus 86 l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~-~~~~f 159 (254)
T 1xtp_A 86 IASLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATL-PPNTY 159 (254)
T ss_dssp HHTSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCC-CSSCE
T ss_pred HHhhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCC-CCCCe
Confidence 344556678899999999999999998863 468999999999999999987654 358999999987643 24689
Q ss_pred CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 408 DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 408 D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
|+|++... +..- ...+ ...+|+.+.++|||||+|++++.
T Consensus 160 D~v~~~~~------l~~~-------~~~~-------~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 160 DLIVIQWT------AIYL-------TDAD-------FVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEEEESC------GGGS-------CHHH-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEcch------hhhC-------CHHH-------HHHHHHHHHHhcCCCeEEEEEec
Confidence 99997432 1111 1122 34569999999999999998874
No 208
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.09 E-value=5.6e-10 Score=104.89 Aligned_cols=126 Identities=17% Similarity=0.119 Sum_probs=91.3
Q ss_pred CCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAP 415 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~P 415 (528)
+.+|||+|||+|..+..++.. +.+|+|+|+++.+++.++++ .. +++++++|+..++. ..++||+|++...
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----~~-~~~~~~~d~~~~~~-~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-----HP-SVTFHHGTITDLSD-SPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-----CT-TSEEECCCGGGGGG-SCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-----CC-CCeEEeCccccccc-CCCCeEEEEehhh
Confidence 779999999999999999886 45899999999999999887 23 37899999988653 3478999998532
Q ss_pred CCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCc------------hhhHHHHHHHHhh
Q 009708 416 CSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDP------------EENEERVEAFLLR 483 (528)
Q Consensus 416 csg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~------------~Ene~~v~~~l~~ 483 (528)
. ..-+ .++ ...+|+.+.++|||||++++++..... .-..+.+..++.+
T Consensus 112 l------~~~~-------~~~-------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 171 (203)
T 3h2b_A 112 L------IHMG-------PGE-------LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALET 171 (203)
T ss_dssp S------TTCC-------TTT-------HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHH
T ss_pred H------hcCC-------HHH-------HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHH
Confidence 2 1111 112 234699999999999999988755332 1124455666666
Q ss_pred CCCceEecC
Q 009708 484 HPEFSIDPA 492 (528)
Q Consensus 484 ~~~~~~~~~ 492 (528)
. +|+++.+
T Consensus 172 ~-Gf~~~~~ 179 (203)
T 3h2b_A 172 A-GFQVTSS 179 (203)
T ss_dssp T-TEEEEEE
T ss_pred C-CCcEEEE
Confidence 4 5766544
No 209
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.09 E-value=2.4e-10 Score=110.75 Aligned_cols=132 Identities=16% Similarity=0.137 Sum_probs=94.7
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 414 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~ 414 (528)
++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++...+.. +++++++|+..+... .++||+|+++.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~-~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKR-VRNYFCCGLQDFTPE-PDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGG-EEEEEECCGGGCCCC-SSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCc-eEEEEEcChhhcCCC-CCCEEEEEEcc
Confidence 57899999999999999888753 469999999999999999998877533 488999998876532 35799999863
Q ss_pred CCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCc-----------hhhHHHHHHHHhh
Q 009708 415 PCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDP-----------EENEERVEAFLLR 483 (528)
Q Consensus 415 Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~-----------~Ene~~v~~~l~~ 483 (528)
. +..-+ ... ...+|+.+.++|||||+|++++..... ....+.+..++.+
T Consensus 155 ~------l~~~~-------~~~-------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 214 (241)
T 2ex4_A 155 V------IGHLT-------DQH-------LAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICS 214 (241)
T ss_dssp C------GGGSC-------HHH-------HHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHH
T ss_pred h------hhhCC-------HHH-------HHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHH
Confidence 2 21111 111 245699999999999999986643211 0134456666666
Q ss_pred CCCceEec
Q 009708 484 HPEFSIDP 491 (528)
Q Consensus 484 ~~~~~~~~ 491 (528)
. +|++..
T Consensus 215 a-Gf~~~~ 221 (241)
T 2ex4_A 215 A-GLSLLA 221 (241)
T ss_dssp T-TCCEEE
T ss_pred c-CCeEEE
Confidence 4 465543
No 210
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.08 E-value=2e-10 Score=110.35 Aligned_cols=93 Identities=9% Similarity=0.072 Sum_probs=74.6
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC-CCCCCEEEE
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-TVKCDKVLL 412 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~-~~~fD~Vl~ 412 (528)
.++.+|||+|||+|..+..+++. ..+|+++|+|+.+++.++++ .. +++++++|+....+.. .++||+|++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~-~~~~~~~d~~~~~~~~~~~~fD~v~~ 117 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-----AP-HADVYEWNGKGELPAGLGAPFGLIVS 117 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-----CT-TSEEEECCSCSSCCTTCCCCEEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-----CC-CceEEEcchhhccCCcCCCCEEEEEe
Confidence 56889999999999999999886 46999999999999999988 23 3789999995433333 478999998
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEE
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVY 463 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvy 463 (528)
.... ..+++++.++|||||+|+.
T Consensus 118 ~~~~----------------------------~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 118 RRGP----------------------------TSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp ESCC----------------------------SGGGGGHHHHEEEEEEEEE
T ss_pred CCCH----------------------------HHHHHHHHHHcCCCcEEEE
Confidence 6221 1247788999999999993
No 211
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.08 E-value=9.9e-11 Score=125.48 Aligned_cols=113 Identities=14% Similarity=0.118 Sum_probs=87.4
Q ss_pred hcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCE
Q 009708 330 VVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 409 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~ 409 (528)
.+...++.+|||+|||+|..++.+++. +..+|+|+|+++ +++.++++++.+|+.++++++++|+.++.. +++||+
T Consensus 153 ~l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~--~~~fD~ 227 (480)
T 3b3j_A 153 NHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL--PEQVDI 227 (480)
T ss_dssp TGGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC--SSCEEE
T ss_pred hhhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc--CCCeEE
Confidence 344457889999999999999988874 456999999998 999999999999997779999999987532 368999
Q ss_pred EEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 410 VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 410 Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
|+++++... . ..+. ....+..+.++|||||+++...++
T Consensus 228 Ivs~~~~~~----~---------~~e~-------~~~~l~~~~~~LkpgG~li~~~~~ 265 (480)
T 3b3j_A 228 IISEPMGYM----L---------FNER-------MLESYLHAKKYLKPSGNMFPTIGD 265 (480)
T ss_dssp EECCCCHHH----H---------TCHH-------HHHHHHHGGGGEEEEEEEESCEEE
T ss_pred EEEeCchHh----c---------CcHH-------HHHHHHHHHHhcCCCCEEEEEece
Confidence 999876310 0 0011 233466889999999999855444
No 212
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.08 E-value=4.1e-10 Score=124.83 Aligned_cols=167 Identities=14% Similarity=0.132 Sum_probs=106.2
Q ss_pred cceeEeecchHHHHHHh----cC--CCCCCeEEEeCCccchHHHHHHHHcC--CCcEEEEEcCChHHHHHH--HHHHHH-
Q 009708 314 EGLCAVQDESAGLVVAV----VD--PQPGQSIVDCCAAPGGKTLYMASCLS--GQGLVYAIDINKGRLRIL--NETAKL- 382 (528)
Q Consensus 314 ~G~~~~Qd~~s~l~~~~----l~--~~~g~~VLDl~aG~G~kt~~la~~~~--~~~~v~avD~s~~~l~~~--~~n~~~- 382 (528)
.|.|+....-+.+++.+ +. ..++.+|||.|||+|++.+.++..++ ...+++|+|+++.++..+ +.|+..
T Consensus 294 ~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN 373 (878)
T 3s1s_A 294 EGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFP 373 (878)
T ss_dssp CBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTST
T ss_pred CceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHh
Confidence 45666666666666665 33 23578999999999999999998764 135799999999999999 666655
Q ss_pred ---cCCCccEEEEcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHH-----------HHHHHHHHH
Q 009708 383 ---HQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEE-----------LKILQDELL 448 (528)
Q Consensus 383 ---~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~-----------l~~~q~~lL 448 (528)
.|+.+ ..+...|+.........+||+|++|||+++.... +..... ....+.. ...++..++
T Consensus 374 ~LlhGi~~-~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~---~~e~kd-~~~r~~~g~p~~p~s~~G~~DLy~aFI 448 (878)
T 3s1s_A 374 QLVSSNNA-PTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTD---PAIKRK-FAHKIIQLTGNRPQTLFGQIGVEALFL 448 (878)
T ss_dssp TTCBTTBC-CEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCC---HHHHHH-HHHHHHHHHSSCCSSCSSSCCHHHHHH
T ss_pred hhhcCCCc-ceEEecchhcccccccCCCCEEEECCCccccccc---hhhhhh-HHHHhhhhccccccccccccchHHHHH
Confidence 33332 3556777766432234689999999999642211 100000 0000000 012466789
Q ss_pred HHHhccCcCCCEEEEEcCC-CCc--hhhHHHHHHHHhhCC
Q 009708 449 DAASLLVKPGGVLVYSTCS-IDP--EENEERVEAFLLRHP 485 (528)
Q Consensus 449 ~~a~~~LkpGG~LvysTcs-~~~--~Ene~~v~~~l~~~~ 485 (528)
.++.++|++||++++.+-. +.. ......+..+|.++-
T Consensus 449 e~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kkLRk~LLe~~ 488 (878)
T 3s1s_A 449 ELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFLVGNF 488 (878)
T ss_dssp HHHHHHSCTTCEEEEEEETHHHHCCSHHHHHHHHHHTTTT
T ss_pred HHHHHhcCCCcEEEEEEChHHhccCChHHHHHHHHHHhCC
Confidence 9999999999999877644 221 222445666666543
No 213
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.08 E-value=3.4e-10 Score=112.76 Aligned_cols=126 Identities=13% Similarity=0.160 Sum_probs=89.5
Q ss_pred HHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCC---ccEEEEcCccccccc
Q 009708 325 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVN---SVIRTIHADLRTFAD 401 (528)
Q Consensus 325 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~---~~i~~~~~D~~~~~~ 401 (528)
.++...+...++.+|||+|||+|..+..++.. +.+|+|+|+|+.+++.+++++...+.. .++.+..+|+..++.
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK 123 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc
Confidence 34455555567889999999999999999986 459999999999999999988654432 237788899887651
Q ss_pred --cCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 402 --NSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 402 --~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
...++||+|++...+ +.+-++... +..+ ...+|+++.++|||||+|++.++.
T Consensus 124 ~~~~~~~fD~V~~~g~~-----l~~~~~~~~--~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 124 DVPAGDGFDAVICLGNS-----FAHLPDSKG--DQSE-------HRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HSCCTTCEEEEEECTTC-----GGGSCCSSS--SSHH-------HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccccCCCeEEEEEcChH-----HhhcCcccc--CHHH-------HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 124689999974211 222221000 0112 245699999999999999988764
No 214
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=99.08 E-value=2.8e-10 Score=123.41 Aligned_cols=162 Identities=17% Similarity=0.188 Sum_probs=111.8
Q ss_pred ccceeEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCC------------CcEEEEEcCChHHHHHHHHHH
Q 009708 313 KEGLCAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG------------QGLVYAIDINKGRLRILNETA 380 (528)
Q Consensus 313 ~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~------------~~~v~avD~s~~~l~~~~~n~ 380 (528)
+.|.|+....-+.+++.++.+++|++|+|.|||+|++.+.+.+.+.. ...++|+|+++.....++.|+
T Consensus 195 ~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 195 DSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp SCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred cCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 46899998889999999999999999999999999999988776532 246999999999999999999
Q ss_pred HHcCCCccEEEEcCcccccccc---CCCCCCEEEEcCCCCCCcc---ccCCchhhccCCHHHHHHHHHHHHHHHHHHhcc
Q 009708 381 KLHQVNSVIRTIHADLRTFADN---STVKCDKVLLDAPCSGLGV---LSKRADLRWNRRLEDMEELKILQDELLDAASLL 454 (528)
Q Consensus 381 ~~~g~~~~i~~~~~D~~~~~~~---~~~~fD~Vl~D~Pcsg~G~---~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~ 454 (528)
-.+|+.. ..+.++|....+.. ...+||+|+.|||+++... ..+.+.. ...+ +.+..++.+++..
T Consensus 275 ~lhg~~~-~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~-~~~~--------~~~~~Fl~~~l~~ 344 (530)
T 3ufb_A 275 LLHGLEY-PRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPED-MQTA--------ETAMLFLQLIMRK 344 (530)
T ss_dssp HHHTCSC-CEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGG-GCCC--------BHHHHHHHHHHHH
T ss_pred HhcCCcc-ccccccccccCchhhhcccccceEEEecCCCCccccccccccCchh-cccc--------hhHHHHHHHHHHH
Confidence 9999874 45778887654321 1357999999999975321 1111110 0111 1223356666666
Q ss_pred Cc-------CCCEEEEEcCC--CCchhhHHHHHHHHhhC
Q 009708 455 VK-------PGGVLVYSTCS--IDPEENEERVEAFLLRH 484 (528)
Q Consensus 455 Lk-------pGG~LvysTcs--~~~~Ene~~v~~~l~~~ 484 (528)
|| +||++.+.+-. +.....+..+..+|-++
T Consensus 345 Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~~iRk~Lle~ 383 (530)
T 3ufb_A 345 LKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKN 383 (530)
T ss_dssp BCCTTSSSSSCCEEEEEEEHHHHHCCTHHHHHHHHHHHH
T ss_pred hhhhhhccCCCceEEEEecchhhhccchHHHHHHHHhhc
Confidence 65 79998766432 33332344455555443
No 215
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.07 E-value=2.5e-10 Score=113.18 Aligned_cols=111 Identities=20% Similarity=0.203 Sum_probs=85.5
Q ss_pred HHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC
Q 009708 324 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS 403 (528)
Q Consensus 324 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~ 403 (528)
...+...+.+.++.+|||+|||+|..+..++. ..++|+|+|+|+.+++.++++. . +++++++|+..++.
T Consensus 46 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-----~-~~~~~~~d~~~~~~-- 114 (279)
T 3ccf_A 46 GEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-----P-HLHFDVADARNFRV-- 114 (279)
T ss_dssp CCHHHHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-----T-TSCEEECCTTTCCC--
T ss_pred HHHHHHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-----C-CCEEEECChhhCCc--
Confidence 33445666778889999999999999999988 3579999999999999998765 3 37788999988653
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
.++||+|++.... ..-++ ...+|+++.++|||||+|++++..
T Consensus 115 ~~~fD~v~~~~~l------~~~~d----------------~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 115 DKPLDAVFSNAML------HWVKE----------------PEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp SSCEEEEEEESCG------GGCSC----------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCcCEEEEcchh------hhCcC----------------HHHHHHHHHHhcCCCcEEEEEecC
Confidence 4689999975332 11111 124689999999999999987654
No 216
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.06 E-value=4.4e-10 Score=105.70 Aligned_cols=74 Identities=19% Similarity=0.228 Sum_probs=63.4
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEE
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 411 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl 411 (528)
.+.++.+|||+|||+|..+..++.. +..+|+|+|+++.+++.+++|+. +++++++|+..++ ++||+|+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~----~~~D~v~ 115 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS----GKYDTWI 115 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC----CCEEEEE
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC----CCeeEEE
Confidence 4557889999999999999999875 34589999999999999999875 3789999998863 5799999
Q ss_pred EcCCCC
Q 009708 412 LDAPCS 417 (528)
Q Consensus 412 ~D~Pcs 417 (528)
+|||..
T Consensus 116 ~~~p~~ 121 (200)
T 1ne2_A 116 MNPPFG 121 (200)
T ss_dssp ECCCC-
T ss_pred ECCCch
Confidence 999983
No 217
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.06 E-value=4.4e-10 Score=113.61 Aligned_cols=132 Identities=12% Similarity=0.128 Sum_probs=94.0
Q ss_pred eEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC-CCCCCEEEEcCCC
Q 009708 338 SIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-TVKCDKVLLDAPC 416 (528)
Q Consensus 338 ~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~-~~~fD~Vl~D~Pc 416 (528)
+|||+|||.|+.+..+++..+ ..+|++||+++.+++.+++++.... ..+++++++|+..+.... .++||+|++|.+.
T Consensus 92 rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred EEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 899999999999999998644 5699999999999999999876543 345999999999876433 4689999999755
Q ss_pred CCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchh-hHHHHHHHHhhCCCceE
Q 009708 417 SGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEE-NEERVEAFLLRHPEFSI 489 (528)
Q Consensus 417 sg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~E-ne~~v~~~l~~~~~~~~ 489 (528)
.. +. |...+ ..++++.+.+.|+|||+|+..+.+..+.+ ...++..+-+.++...+
T Consensus 170 ~~-~~----~~~L~-------------t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~ 225 (317)
T 3gjy_A 170 GA-IT----PQNFT-------------TVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAV 225 (317)
T ss_dssp TS-CC----CGGGS-------------BHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEE
T ss_pred cc-cc----chhhh-------------HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEE
Confidence 21 11 11000 13568999999999999998776533322 22344444444554443
No 218
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.06 E-value=7.4e-11 Score=116.37 Aligned_cols=91 Identities=18% Similarity=0.128 Sum_probs=75.4
Q ss_pred HHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCCh-------HHHHHHHHHHHHcCCCccEEEEcCcc
Q 009708 324 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINK-------GRLRILNETAKLHQVNSVIRTIHADL 396 (528)
Q Consensus 324 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~-------~~l~~~~~n~~~~g~~~~i~~~~~D~ 396 (528)
..++..++.+.++.+|||+|||+|..++.+|.. +++|+++|+++ .+++.+++|++.+|+.++++++++|+
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 445556666667889999999999999999985 46899999999 99999999999988876799999999
Q ss_pred ccccccCC---CCCCEEEEcCCCC
Q 009708 397 RTFADNST---VKCDKVLLDAPCS 417 (528)
Q Consensus 397 ~~~~~~~~---~~fD~Vl~D~Pcs 417 (528)
.++..... .+||+|++|||+.
T Consensus 149 ~~~l~~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 149 AEQMPALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHHHHHHHHHHCCCSEEEECCCC-
T ss_pred HHHHHhhhccCCCccEEEECCCCC
Confidence 88643222 5799999999984
No 219
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.06 E-value=3.7e-10 Score=110.28 Aligned_cols=105 Identities=16% Similarity=0.182 Sum_probs=81.8
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEE
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 411 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl 411 (528)
.+.++.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.+++++ ..+.. +++++++|+..++. ..++||+|+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~-~~~~~~~d~~~~~~-~~~~fD~v~ 109 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGVDR-KVQVVQADARAIPL-PDESVHGVI 109 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTSCT-TEEEEESCTTSCCS-CTTCEEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hccCC-ceEEEEcccccCCC-CCCCeeEEE
Confidence 4567889999999999999999875 479999999999999999988 33334 48999999987652 246899999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+.... ...+ + ...+++++.++|||||+++++
T Consensus 110 ~~~~l------~~~~---------~-------~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 110 VVHLW------HLVP---------D-------WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EESCG------GGCT---------T-------HHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCch------hhcC---------C-------HHHHHHHHHHHCCCCcEEEEE
Confidence 74322 1111 1 134689999999999999876
No 220
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.06 E-value=4.1e-10 Score=108.59 Aligned_cols=111 Identities=21% Similarity=0.199 Sum_probs=85.3
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCC
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 405 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~ 405 (528)
.+...+...++.+|||+|||+|..+..+++. +..+|+++|+++.+++.++++... ++++++++|+..+.. ..+
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~-~~~ 106 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHL-PQD 106 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCC-CTT
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccC-CCC
Confidence 4566677678899999999999999999886 234999999999999999877543 248899999987652 246
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
+||+|++.... ...+ + ...+|+.+.++|||||++++++
T Consensus 107 ~fD~v~~~~~l------~~~~---------~-------~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 107 SFDLAYSSLAL------HYVE---------D-------VARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CEEEEEEESCG------GGCS---------C-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEEeccc------cccc---------h-------HHHHHHHHHHhcCcCcEEEEEe
Confidence 89999975432 1111 1 2346899999999999999876
No 221
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.05 E-value=9e-11 Score=116.88 Aligned_cols=111 Identities=16% Similarity=0.107 Sum_probs=74.5
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHH-HHcCCCccEEEE--cCccccccccCCCCCCE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETA-KLHQVNSVIRTI--HADLRTFADNSTVKCDK 409 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~-~~~g~~~~i~~~--~~D~~~~~~~~~~~fD~ 409 (528)
+.+|.+|||+|||||+++..++++ ++|+|+|+++ ++..++++. .......+++++ ++|+..++ .++||+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~---~~~fD~ 151 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME---PFQADT 151 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC---CCCCSE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC---CCCcCE
Confidence 567899999999999999998875 6899999998 432222110 000111147888 99998865 368999
Q ss_pred EEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCC--EEEEEcCC
Q 009708 410 VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGG--VLVYSTCS 467 (528)
Q Consensus 410 Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG--~LvysTcs 467 (528)
|++|.. ..+|. + .+..... ..+|..+.++||||| .+++.+..
T Consensus 152 Vvsd~~-~~~~~----~---------~~d~~~~--l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 152 VLCDIG-ESNPT----A---------AVEASRT--LTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EEECCC-CCCSC----H---------HHHHHHH--HHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred EEECCC-cCCCc----h---------hhhHHHH--HHHHHHHHHHhccCCCcEEEEEeCC
Confidence 999866 32222 1 1111111 126888999999999 99875544
No 222
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.04 E-value=7.2e-11 Score=116.93 Aligned_cols=112 Identities=15% Similarity=0.065 Sum_probs=74.2
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHH-HHcCCCccEEEE--cCccccccccCCCCCC
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETA-KLHQVNSVIRTI--HADLRTFADNSTVKCD 408 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~-~~~g~~~~i~~~--~~D~~~~~~~~~~~fD 408 (528)
.+.+|.+|||+|||||+++..+++. ++|+|+|+++ ++..++++. .......++.++ ++|+..++ .++||
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~---~~~fD 142 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP---VERTD 142 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC---CCCCS
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC---CCCCc
Confidence 3567899999999999999998874 6899999998 432221110 000011137888 99998865 36899
Q ss_pred EEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCC--EEEEEcCC
Q 009708 409 KVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGG--VLVYSTCS 467 (528)
Q Consensus 409 ~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG--~LvysTcs 467 (528)
+|++|.. ..+|. + .++.... ..+|..+.++||||| .+++.+..
T Consensus 143 ~V~sd~~-~~~~~----~---------~~d~~~~--l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 143 VIMCDVG-ESSPK----W---------SVESERT--IKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EEEECCC-CCCSC----H---------HHHHHHH--HHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEEEeCc-ccCCc----c---------chhHHHH--HHHHHHHHHHhccCCCeEEEEEeCC
Confidence 9999966 32222 1 1111111 126888999999999 99865543
No 223
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.03 E-value=3.5e-12 Score=124.69 Aligned_cols=128 Identities=13% Similarity=0.121 Sum_probs=93.1
Q ss_pred eEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcc
Q 009708 317 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 396 (528)
Q Consensus 317 ~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~ 396 (528)
|..+......++..+.+.++++|||+|||+|..+..+++. .++|+|+|+|+.+++.++++++ +. .+++++++|+
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~---~~~v~~id~~~~~~~~a~~~~~--~~-~~v~~~~~D~ 84 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLK--LN-TRVTLIHQDI 84 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH---SSEEEESSSSCSSSSSSSCTTT--TC-SEEEECCSCC
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh---CCeEEEEECCHHHHHHHHHHhc--cC-CceEEEECCh
Confidence 4556666777888888888999999999999999999987 3799999999999999988775 22 3589999999
Q ss_pred ccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHH---HHHHHH----HHHhccCcCCCEEEEEc
Q 009708 397 RTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKI---LQDELL----DAASLLVKPGGVLVYST 465 (528)
Q Consensus 397 ~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~---~q~~lL----~~a~~~LkpGG~LvysT 465 (528)
.++.....++| .|++|||+..++. .+..+.. .....+ +.+.++|+|||.|++.+
T Consensus 85 ~~~~~~~~~~f-~vv~n~Py~~~~~--------------~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 85 LQFQFPNKQRY-KIVGNIPYHLSTQ--------------IIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp TTTTCCCSSEE-EEEEECCSSSCHH--------------HHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred hhcCcccCCCc-EEEEeCCccccHH--------------HHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 88753212468 8999999954321 1111110 111223 66888899999876443
No 224
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.02 E-value=7.5e-10 Score=107.31 Aligned_cols=109 Identities=14% Similarity=0.171 Sum_probs=82.2
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC----CCCCC
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS----TVKCD 408 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~----~~~fD 408 (528)
+.++.+|||+|||+|..+..++... .+|+++|+|+.+++.+++++ ... +++++++|+.++.... ...||
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~~~~~a~~~~---~~~-~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFF---PRVIGLDVSKSALEIAAKEN---TAA-NISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHS---SCEEEEESCHHHHHHHHHHS---CCT-TEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhC---CCEEEEECCHHHHHHHHHhC---ccc-CceEEECcccccccccccccccCcc
Confidence 5678899999999999999999873 38999999999999999876 222 4899999998754321 12499
Q ss_pred EEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 409 KVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 409 ~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
+|++...... . ...+. ..+++++.++|||||+|++++...
T Consensus 127 ~v~~~~~~~~------~-------~~~~~-------~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 127 NIYMRTGFHH------I-------PVEKR-------ELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp EEEEESSSTT------S-------CGGGH-------HHHHHHHHHHHTTTCEEEEEEECT
T ss_pred EEEEcchhhc------C-------CHHHH-------HHHHHHHHHHcCCCCEEEEEeCCc
Confidence 9998644321 1 11222 346999999999999988876654
No 225
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.02 E-value=1.4e-09 Score=112.36 Aligned_cols=118 Identities=16% Similarity=0.088 Sum_probs=92.1
Q ss_pred HHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC
Q 009708 324 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS 403 (528)
Q Consensus 324 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~ 403 (528)
...+...++..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...|+.++++++++|+.+..
T Consensus 171 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 245 (374)
T 1qzz_A 171 YEAPADAYDWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL--- 245 (374)
T ss_dssp THHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---
T ss_pred HHHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcC---
Confidence 3445556667778899999999999999999875 4579999999 9999999999999998867999999987622
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
+..||+|++.... .. ..... ...+|+++.+.|||||+|++.+.
T Consensus 246 ~~~~D~v~~~~vl------~~-------~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 246 PVTADVVLLSFVL------LN-------WSDED-------ALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp SCCEEEEEEESCG------GG-------SCHHH-------HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCEEEEeccc------cC-------CCHHH-------HHHHHHHHHHhcCCCcEEEEEec
Confidence 2349999974322 11 11111 23579999999999999998766
No 226
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.02 E-value=7e-10 Score=107.34 Aligned_cols=103 Identities=14% Similarity=0.113 Sum_probs=78.6
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc-ccCCCCCCEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DNSTVKCDKVL 411 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~-~~~~~~fD~Vl 411 (528)
..++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.++++ ++++++|+.++. +...++||+|+
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~ 106 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVM 106 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEE
Confidence 456789999999999999999886 45799999999999988765 568899988763 22347899999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
+.- ++..-+ ..++ ..+++++.++|||||++++++..
T Consensus 107 ~~~------~l~~~~-------~~~~-------~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 107 ISH------FVEHLD-------PERL-------FELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp EES------CGGGSC-------GGGH-------HHHHHHHHHHBCTTCCEEEEEEC
T ss_pred ECC------chhhCC-------cHHH-------HHHHHHHHHHcCCCcEEEEEeCC
Confidence 742 222211 1122 34699999999999999987754
No 227
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.02 E-value=2.8e-10 Score=113.93 Aligned_cols=122 Identities=16% Similarity=0.128 Sum_probs=82.0
Q ss_pred cCCCCCCeEEEeCC------ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEE-EcCccccccccC
Q 009708 331 VDPQPGQSIVDCCA------APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRT-IHADLRTFADNS 403 (528)
Q Consensus 331 l~~~~g~~VLDl~a------G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~-~~~D~~~~~~~~ 403 (528)
+.+.+|.+|||+|| |||+ ..++++++..++|+|+|+++. ++ ++++ +++|+..+..
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~-~v~~~i~gD~~~~~~-- 120 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VS-DADSTLIGDCATVHT-- 120 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BC-SSSEEEESCGGGCCC--
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CC-CCEEEEECccccCCc--
Confidence 45788999999999 7788 556666665689999999998 13 3678 9999987643
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhh
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLR 483 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~ 483 (528)
.++||+|++|+++...|....+.. .. ..++..+++.+.++|||||+|++.+... ...+ .+.+.+++
T Consensus 121 ~~~fD~Vvsn~~~~~~g~~~~d~~----~~-------~~l~~~~l~~a~r~LkpGG~~v~~~~~~--~~~~-~l~~~l~~ 186 (290)
T 2xyq_A 121 ANKWDLIISDMYDPRTKHVTKEND----SK-------EGFFTYLCGFIKQKLALGGSIAVKITEH--SWNA-DLYKLMGH 186 (290)
T ss_dssp SSCEEEEEECCCCCC---CCSCCC----CC-------CTHHHHHHHHHHHHEEEEEEEEEEECSS--SCCH-HHHHHHTT
T ss_pred cCcccEEEEcCCcccccccccccc----ch-------HHHHHHHHHHHHHhcCCCcEEEEEEecc--CCHH-HHHHHHHH
Confidence 267999999987655554322110 00 1123467999999999999999754332 2222 44456665
Q ss_pred C
Q 009708 484 H 484 (528)
Q Consensus 484 ~ 484 (528)
+
T Consensus 187 ~ 187 (290)
T 2xyq_A 187 F 187 (290)
T ss_dssp E
T ss_pred c
Confidence 4
No 228
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.02 E-value=4e-10 Score=110.53 Aligned_cols=103 Identities=20% Similarity=0.234 Sum_probs=79.0
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.++.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.+++++. +++++++|+..+.. .++||+|++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~--~~~fD~v~~~ 117 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSL--GRRFSAVTCM 117 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCC--SCCEEEEEEC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCc--cCCcCEEEEc
Confidence 35679999999999999999875 4689999999999999988743 37899999988654 4789999975
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
.. ++..-+ ++.+ ...+|+.+.++|||||+|++++
T Consensus 118 ~~-----~l~~~~------~~~~-------~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 118 FS-----SIGHLA------GQAE-------LDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp TT-----GGGGSC------HHHH-------HHHHHHHHHHTEEEEEEEEECC
T ss_pred Cc-----hhhhcC------CHHH-------HHHHHHHHHHhcCCCcEEEEEe
Confidence 31 111111 1122 2456999999999999999864
No 229
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.01 E-value=1.2e-10 Score=114.90 Aligned_cols=115 Identities=17% Similarity=0.092 Sum_probs=78.6
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcC--C------------------------
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ--V------------------------ 385 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g--~------------------------ 385 (528)
...+|.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.++++++... +
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4457889999999999887766543 23479999999999999999876542 1
Q ss_pred --CccEE-EEcCcccccccc---CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCC
Q 009708 386 --NSVIR-TIHADLRTFADN---STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGG 459 (528)
Q Consensus 386 --~~~i~-~~~~D~~~~~~~---~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG 459 (528)
...+. ++++|+....+. ..++||+|++.- ++ ..+..-......+|+++.++|||||
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~------~l------------~~i~~~~~~~~~~l~~i~r~LKPGG 191 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLL------AM------------ECACCSLDAYRAALCNLASLLKPGG 191 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEES------CH------------HHHCSSHHHHHHHHHHHHTTEEEEE
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeehH------HH------------HHhcCCHHHHHHHHHHHHHHcCCCc
Confidence 01243 788998874221 135899999631 11 1100001123457999999999999
Q ss_pred EEEEEcC
Q 009708 460 VLVYSTC 466 (528)
Q Consensus 460 ~LvysTc 466 (528)
+|++++.
T Consensus 192 ~li~~~~ 198 (263)
T 2a14_A 192 HLVTTVT 198 (263)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999864
No 230
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.01 E-value=9.3e-10 Score=106.12 Aligned_cols=104 Identities=12% Similarity=0.115 Sum_probs=81.1
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.++.+|||+|||+|..+..++.. +.+|+++|+++.+++.++++. .. .+++++++|+..++. ..++||+|++.
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~~-~~~~~~~~d~~~~~~-~~~~fD~v~~~ 123 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG---EG-PDLSFIKGDLSSLPF-ENEQFEAIMAI 123 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT---CB-TTEEEEECBTTBCSS-CTTCEEEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc---cc-CCceEEEcchhcCCC-CCCCccEEEEc
Confidence 46789999999999999999986 469999999999999988774 22 348999999988653 24789999974
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
... ...++ ...+|+.+.++|||||++++++..
T Consensus 124 ~~l------~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 124 NSL------EWTEE----------------PLRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp SCT------TSSSC----------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ChH------hhccC----------------HHHHHHHHHHHhCCCeEEEEEEcC
Confidence 322 22121 134689999999999999988754
No 231
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.01 E-value=1.3e-10 Score=112.03 Aligned_cols=102 Identities=16% Similarity=0.141 Sum_probs=79.5
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.++.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.+++++.. +++++++|+.++. ..++||+|++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~--~~~~fD~v~~~ 110 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEH---FNDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQ--LPRRYDNIVLT 110 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTT---CSCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCC--CSSCEEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHh---CCcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcC--cCCcccEEEEh
Confidence 46779999999999999999875 34899999999999999887543 3889999998873 34789999974
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHh-ccCcCCCEEEEEcCC
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAAS-LLVKPGGVLVYSTCS 467 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~-~~LkpGG~LvysTcs 467 (528)
- ++.+-++ ...+|+++. ++|||||+|++++..
T Consensus 111 ~------~l~~~~~----------------~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 111 H------VLEHIDD----------------PVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp S------CGGGCSS----------------HHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred h------HHHhhcC----------------HHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 2 2222211 134699999 999999999987744
No 232
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.01 E-value=5.2e-09 Score=107.71 Aligned_cols=122 Identities=17% Similarity=0.160 Sum_probs=93.9
Q ss_pred hHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc
Q 009708 323 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 402 (528)
Q Consensus 323 ~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~ 402 (528)
....+...++..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++++..++.++++++.+|+.+.+.
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 254 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY- 254 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC-
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC-
Confidence 33445556667778899999999999999999985 3579999999 99999999999999988789999999987532
Q ss_pred CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 403 STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 403 ~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
..+|+|++.-.. .. +..++ ..++|+++.+.|||||+|++.+....
T Consensus 255 --~~~D~v~~~~vl------h~-------~~d~~-------~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 255 --PEADAVLFCRIL------YS-------ANEQL-------STIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp --CCCSEEEEESCG------GG-------SCHHH-------HHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred --CCCCEEEEechh------cc-------CCHHH-------HHHHHHHHHHhcCCCCEEEEEecccC
Confidence 235999973222 11 11122 34569999999999999987765543
No 233
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.00 E-value=5e-10 Score=110.37 Aligned_cols=114 Identities=18% Similarity=0.237 Sum_probs=81.6
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 414 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~ 414 (528)
.+.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.+++ .. +++++++|+.+++. ..++||+|++.-
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~------~~-~v~~~~~~~e~~~~-~~~sfD~v~~~~ 107 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR------HP-RVTYAVAPAEDTGL-PPASVDVAIAAQ 107 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC------CT-TEEEEECCTTCCCC-CSSCEEEEEECS
T ss_pred CCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh------cC-Cceeehhhhhhhcc-cCCcccEEEEee
Confidence 3569999999999999999875 4689999999999977643 23 48999999987653 347899999721
Q ss_pred CCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCch--hhHHHHHHHHh
Q 009708 415 PCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPE--ENEERVEAFLL 482 (528)
Q Consensus 415 Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~--Ene~~v~~~l~ 482 (528)
++. |. +. ..++.++.++|||||+|++.+...... +-...+..+..
T Consensus 108 ------~~h------~~-~~----------~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 154 (257)
T 4hg2_A 108 ------AMH------WF-DL----------DRFWAELRRVARPGAVFAAVTYGLTRVDPEVDAVVDRLYH 154 (257)
T ss_dssp ------CCT------TC-CH----------HHHHHHHHHHEEEEEEEEEEEECCCBCCHHHHHHHHHHHH
T ss_pred ------ehh------Hh-hH----------HHHHHHHHHHcCCCCEEEEEECCCCCCCHHHHHHHHHHHh
Confidence 111 11 11 135888999999999999877765432 22334445443
No 234
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.00 E-value=1.6e-09 Score=104.13 Aligned_cols=106 Identities=15% Similarity=0.180 Sum_probs=80.4
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.++++. . +++++++|+..+.. .++||+|++.
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----~-~~~~~~~d~~~~~~--~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----P-DATLHQGDMRDFRL--GRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----T-TCEEEECCTTTCCC--SSCEEEEEEC
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----C-CCEEEECCHHHccc--CCCCcEEEEc
Confidence 467899999999999999999873 38999999999999998864 3 37889999987653 4689999952
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
. +++... .+..+ ...+|+.+.++|||||.++++++..
T Consensus 108 ~-----~~~~~~------~~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 108 F-----SSVGYL------KTTEE-------LGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp T-----TGGGGC------CSHHH-------HHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred C-----chHhhc------CCHHH-------HHHHHHHHHHhcCCCeEEEEEeccC
Confidence 1 122111 11222 2456999999999999999887654
No 235
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.00 E-value=6e-10 Score=109.49 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=83.7
Q ss_pred HHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC
Q 009708 324 AGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS 403 (528)
Q Consensus 324 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~ 403 (528)
...+...+.+.++.+|||+|||+|..+..+++ ...+|+|+|+|+.+++.++++. +++++++|+..++. .
T Consensus 23 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~-~ 91 (261)
T 3ege_A 23 VNAIINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLAL-P 91 (261)
T ss_dssp HHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCS-C
T ss_pred HHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCC-C
Confidence 44555666777889999999999999999986 3579999999999988766543 48999999987652 2
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
.++||+|++.... ..-+ + ...+++++.++|| ||++++.++.
T Consensus 92 ~~~fD~v~~~~~l------~~~~---------~-------~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 92 DKSVDGVISILAI------HHFS---------H-------LEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp TTCBSEEEEESCG------GGCS---------S-------HHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred CCCEeEEEEcchH------hhcc---------C-------HHHHHHHHHHHhC-CcEEEEEEcC
Confidence 4789999975332 1111 1 2346999999999 9988877765
No 236
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.00 E-value=1.2e-09 Score=110.96 Aligned_cols=120 Identities=18% Similarity=0.168 Sum_probs=92.2
Q ss_pred HHHHhcCC--CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC
Q 009708 326 LVVAVVDP--QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS 403 (528)
Q Consensus 326 l~~~~l~~--~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~ 403 (528)
.+...++. .++.+|||+|||+|..+..+++.. +..+++++|++ .+++.+++++...|+.++++++.+|+.+...
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 229 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY-- 229 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC--
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC--
Confidence 33444555 678899999999999999999885 45799999999 9999999999999988789999999987532
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
+..||+|++.-.. .. ....+ ..++|+++.+.|+|||++++.+....
T Consensus 230 ~~~~D~v~~~~~l------~~-------~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 230 GNDYDLVLLPNFL------HH-------FDVAT-------CEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp CSCEEEEEEESCG------GG-------SCHHH-------HHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred CCCCcEEEEcchh------cc-------CCHHH-------HHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 2459999973221 11 11122 24569999999999999888766544
No 237
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.99 E-value=3.6e-10 Score=118.07 Aligned_cols=81 Identities=15% Similarity=0.124 Sum_probs=68.9
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc--CCCccEEEEcCccccccccC-CCCCCEEE
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QVNSVIRTIHADLRTFADNS-TVKCDKVL 411 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~--g~~~~i~~~~~D~~~~~~~~-~~~fD~Vl 411 (528)
+|.+|||+|||+|..++.++.. ..+|+++|+|+.+++.+++|++.+ |++ +++++++|+.++.... ..+||+|+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~-~i~~i~~Da~~~L~~~~~~~fDvV~ 168 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGK-DVNILTGDFKEYLPLIKTFHPDYIY 168 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTC-EEEEEESCGGGSHHHHHHHCCSEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCC-cEEEEECcHHHhhhhccCCCceEEE
Confidence 4889999999999999998874 579999999999999999999998 885 5999999998863321 24799999
Q ss_pred EcCCCCCC
Q 009708 412 LDAPCSGL 419 (528)
Q Consensus 412 ~D~Pcsg~ 419 (528)
+|||..+.
T Consensus 169 lDPPrr~~ 176 (410)
T 3ll7_A 169 VDPARRSG 176 (410)
T ss_dssp ECCEEC--
T ss_pred ECCCCcCC
Confidence 99999763
No 238
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.99 E-value=2e-09 Score=110.29 Aligned_cols=120 Identities=18% Similarity=0.191 Sum_probs=92.7
Q ss_pred HhcCCCC-CCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCC
Q 009708 329 AVVDPQP-GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 407 (528)
Q Consensus 329 ~~l~~~~-g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~f 407 (528)
..++..+ +.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...++.++++++.+|+.......+..|
T Consensus 172 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 249 (352)
T 3mcz_A 172 SELGVFARARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAA 249 (352)
T ss_dssp HTCGGGTTCCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCE
T ss_pred HhCCCcCCCCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCc
Confidence 3445555 78999999999999999998754 579999999 88999999999999998889999999987652234569
Q ss_pred CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCc
Q 009708 408 DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDP 470 (528)
Q Consensus 408 D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~ 470 (528)
|+|++.- ++.. +...+ ...+|+++.+.|||||+|++....+..
T Consensus 250 D~v~~~~------vlh~-------~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 250 DVVMLND------CLHY-------FDARE-------AREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp EEEEEES------CGGG-------SCHHH-------HHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred cEEEEec------cccc-------CCHHH-------HHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 9999732 1211 12222 245699999999999999987765443
No 239
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.99 E-value=1.3e-09 Score=109.88 Aligned_cols=112 Identities=17% Similarity=0.156 Sum_probs=83.2
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcC------CCccEEEEcCcccccc----cc-C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ------VNSVIRTIHADLRTFA----DN-S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g------~~~~i~~~~~D~~~~~----~~-~ 403 (528)
++.+|||+|||+|..+..+++. +..+|+++|+|+.+++.++++....+ ...+++++++|+.... .. .
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 6779999999999999998874 45799999999999999999987652 1224899999998764 11 1
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhcc-CCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWN-RRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~-~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
.++||+|++.... .|. .+..+ ...+|.++.++|||||.+++++..
T Consensus 112 ~~~fD~V~~~~~l------------~~~~~~~~~-------~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 112 QMCFDICSCQFVC------------HYSFESYEQ-------ADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp TCCEEEEEEETCG------------GGGGGSHHH-------HHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCCEEEEEEecch------------hhccCCHHH-------HHHHHHHHHHHhCCCcEEEEecCC
Confidence 3489999974311 121 12222 235699999999999999987653
No 240
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.98 E-value=1.7e-09 Score=108.61 Aligned_cols=94 Identities=20% Similarity=0.208 Sum_probs=77.5
Q ss_pred eEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcc
Q 009708 317 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 396 (528)
Q Consensus 317 ~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~ 396 (528)
|.+.......++..+++.++++|||+|||+|..|..+++. ..+|+|+|+|+.+++.+++++.. .. +++++++|+
T Consensus 32 fL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~--~~-~v~vi~gD~ 105 (295)
T 3gru_A 32 FLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKEL--YN-NIEIIWGDA 105 (295)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHH--CS-SEEEEESCT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhcc--CC-CeEEEECch
Confidence 4444444566777888889999999999999999999987 47999999999999999999873 34 489999999
Q ss_pred ccccccCCCCCCEEEEcCCCC
Q 009708 397 RTFADNSTVKCDKVLLDAPCS 417 (528)
Q Consensus 397 ~~~~~~~~~~fD~Vl~D~Pcs 417 (528)
..+... ...||.|++|+|+.
T Consensus 106 l~~~~~-~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 106 LKVDLN-KLDFNKVVANLPYQ 125 (295)
T ss_dssp TTSCGG-GSCCSEEEEECCGG
T ss_pred hhCCcc-cCCccEEEEeCccc
Confidence 876533 24699999999983
No 241
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.97 E-value=8.9e-09 Score=106.55 Aligned_cols=120 Identities=14% Similarity=0.033 Sum_probs=92.8
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCC
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 405 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~ 405 (528)
.+...++..++.+|||+|||+|..+..+++.. +..+++++|+ +..++.+++++...++.++++++.+|+.... +.
T Consensus 193 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---p~ 267 (369)
T 3gwz_A 193 QVAAAYDFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETI---PD 267 (369)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCC---CS
T ss_pred HHHHhCCCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCC---CC
Confidence 34455566778899999999999999999874 4679999999 9999999999999998878999999998322 23
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCc
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDP 470 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~ 470 (528)
.||+|++.-.. .. +.... ..++|+++.+.|||||+|++.+.....
T Consensus 268 ~~D~v~~~~vl------h~-------~~d~~-------~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 268 GADVYLIKHVL------HD-------WDDDD-------VVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp SCSEEEEESCG------GG-------SCHHH-------HHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred CceEEEhhhhh------cc-------CCHHH-------HHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 79999873221 11 12222 235799999999999999987765543
No 242
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.97 E-value=4.7e-09 Score=108.41 Aligned_cols=115 Identities=11% Similarity=0.018 Sum_probs=88.5
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
..+.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...++.++++++.+|+.......++.||+|++-
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEe
Confidence 346799999999999999999874 4579999999 99999999999998887789999999987420112679999973
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCc
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDP 470 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~ 470 (528)
--. .. +...+. ..+|+++.+.|||||+|++....+..
T Consensus 256 ~vl------h~-------~~~~~~-------~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 256 QFL------DC-------FSEEEV-------ISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp SCS------TT-------SCHHHH-------HHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred chh------hh-------CCHHHH-------HHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 221 11 122222 35699999999999999987765543
No 243
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.97 E-value=6.8e-10 Score=109.28 Aligned_cols=92 Identities=21% Similarity=0.179 Sum_probs=74.4
Q ss_pred hHHHHHHhcCCCCC--CeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcC--------CCccEEEE
Q 009708 323 SAGLVVAVVDPQPG--QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ--------VNSVIRTI 392 (528)
Q Consensus 323 ~s~l~~~~l~~~~g--~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g--------~~~~i~~~ 392 (528)
....+..++.+.+| .+|||+|||+|..++.+|.+ +++|+++|+++..+..+++++++.+ +.++++++
T Consensus 74 ~~e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~ 150 (258)
T 2oyr_A 74 RGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLI 150 (258)
T ss_dssp GGSHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEE
T ss_pred hHHHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEE
Confidence 34556667777777 89999999999999999987 4589999999999888888876542 32459999
Q ss_pred cCccccccccCCCCCCEEEEcCCCC
Q 009708 393 HADLRTFADNSTVKCDKVLLDAPCS 417 (528)
Q Consensus 393 ~~D~~~~~~~~~~~fD~Vl~D~Pcs 417 (528)
++|+.++.......||+|++|||+.
T Consensus 151 ~~D~~~~L~~~~~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 151 HASSLTALTDITPRPQVVYLDPMFP 175 (258)
T ss_dssp ESCHHHHSTTCSSCCSEEEECCCCC
T ss_pred ECCHHHHHHhCcccCCEEEEcCCCC
Confidence 9999987654445799999999984
No 244
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.96 E-value=1.3e-09 Score=107.65 Aligned_cols=100 Identities=9% Similarity=-0.068 Sum_probs=80.1
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc--CC-CccEEEEcCccccccccCCCCCCEEE
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--QV-NSVIRTIHADLRTFADNSTVKCDKVL 411 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~--g~-~~~i~~~~~D~~~~~~~~~~~fD~Vl 411 (528)
.+.+|||+|||+|+.+..+++. + .+|+++|+++.+++.+++++... ++ +.+++++.+|+..+. ++||+|+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~Ii 144 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLIF 144 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEEE
Confidence 4579999999999999998876 4 79999999999999998876431 12 236899999998865 5799999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
+|.+- |. .+++.+.+.|+|||+++..+++.
T Consensus 145 ~d~~d---------p~------------------~~~~~~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 145 CLQEP---------DI------------------HRIDGLKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp ESSCC---------CH------------------HHHHHHHTTEEEEEEEEEEEECT
T ss_pred ECCCC---------hH------------------HHHHHHHHhcCCCcEEEEEcCCc
Confidence 98432 11 15889999999999999876553
No 245
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.96 E-value=4.4e-09 Score=108.15 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=91.8
Q ss_pred HHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCC
Q 009708 325 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 404 (528)
Q Consensus 325 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~ 404 (528)
..+...++..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++++..|+.++++++++|+.+.. +
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~ 247 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL---P 247 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC---S
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCC---C
Confidence 344556667778899999999999999999875 4579999999 9999999999999998867999999987632 2
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
..||+|++.... .. ....+ ..++|+++.+.|||||+|++.+..
T Consensus 248 ~~~D~v~~~~vl------~~-------~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 248 RKADAIILSFVL------LN-------WPDHD-------AVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp SCEEEEEEESCG------GG-------SCHHH-------HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCccEEEEcccc------cC-------CCHHH-------HHHHHHHHHHhcCCCcEEEEEEEe
Confidence 359999974322 11 11121 135699999999999999987765
No 246
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.95 E-value=2.7e-10 Score=111.37 Aligned_cols=114 Identities=19% Similarity=0.130 Sum_probs=81.6
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCC---------------------------
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV--------------------------- 385 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~--------------------------- 385 (528)
..++.+|||+|||+|..+..++.. . ..+|+++|+|+.+++.+++++...+.
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACE-S-FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGG-T-EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhc-c-cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 356789999999999999888764 1 24899999999999999998865431
Q ss_pred -CccE-EEEcCccccccccCC---CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCE
Q 009708 386 -NSVI-RTIHADLRTFADNST---VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGV 460 (528)
Q Consensus 386 -~~~i-~~~~~D~~~~~~~~~---~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~ 460 (528)
..++ .++++|+........ ++||+|++.-.. ..+.........+|+++.++|||||+
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l------------------~~~~~~~~~~~~~l~~~~~~LkpgG~ 193 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCL------------------DAACPDLPAYRTALRNLGSLLKPGGF 193 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCH------------------HHHCSSHHHHHHHHHHHHTTEEEEEE
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhh------------------hhhcCChHHHHHHHHHHHhhCCCCcE
Confidence 1126 889999987643223 689999973211 10000012235679999999999999
Q ss_pred EEEEcC
Q 009708 461 LVYSTC 466 (528)
Q Consensus 461 LvysTc 466 (528)
|++++.
T Consensus 194 li~~~~ 199 (265)
T 2i62_A 194 LVMVDA 199 (265)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 998763
No 247
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.94 E-value=2e-09 Score=101.80 Aligned_cols=100 Identities=20% Similarity=0.175 Sum_probs=76.5
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 414 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~ 414 (528)
++.+|||+|||+|..+..+ +..+++++|+|+.+++.+++++ . .++++++|+..++. ..++||+|++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~-~~~~~~~d~~~~~~-~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----P-EATWVRAWGEALPF-PGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----T-TSEEECCCTTSCCS-CSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----C-CcEEEEcccccCCC-CCCcEEEEEEcC
Confidence 7889999999999988766 2238999999999999998876 3 37889999987642 246899999753
Q ss_pred CCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 415 PCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 415 Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
.. ...++ ...+|+++.++|||||++++++...
T Consensus 104 ~l------~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 104 TL------EFVED----------------VERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CT------TTCSC----------------HHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred hh------hhcCC----------------HHHHHHHHHHHcCCCCEEEEEecCC
Confidence 32 11111 1346899999999999999887543
No 248
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.94 E-value=3.9e-09 Score=117.31 Aligned_cols=119 Identities=13% Similarity=0.148 Sum_probs=89.1
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc------CCCccEEEEcCccccc
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH------QVNSVIRTIHADLRTF 399 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~------g~~~~i~~~~~D~~~~ 399 (528)
.+...+...++.+|||+|||+|..+..+++..++..+|+|+|+|+.+++.++++++.. ++. +++++++|+..+
T Consensus 712 ~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~-nVefiqGDa~dL 790 (950)
T 3htx_A 712 YALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVK-SATLYDGSILEF 790 (950)
T ss_dssp HHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCS-EEEEEESCTTSC
T ss_pred HHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCC-ceEEEECchHhC
Confidence 3445555567889999999999999999876323469999999999999999977643 555 499999999887
Q ss_pred cccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 400 ADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 400 ~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
+.. .+.||+|++. +++.+-++ .. ...+++.+.++|||| .++++|..
T Consensus 791 p~~-d~sFDlVV~~------eVLeHL~d-------p~-------l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 791 DSR-LHDVDIGTCL------EVIEHMEE-------DQ-------ACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp CTT-SCSCCEEEEE------SCGGGSCH-------HH-------HHHHHHHHHHTTCCS-EEEEEECB
T ss_pred Ccc-cCCeeEEEEe------CchhhCCh-------HH-------HHHHHHHHHHHcCCC-EEEEEecC
Confidence 643 4689999973 22322221 11 234689999999999 88877754
No 249
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.94 E-value=2.8e-09 Score=108.45 Aligned_cols=119 Identities=15% Similarity=0.091 Sum_probs=90.8
Q ss_pred HHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCC
Q 009708 325 GLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 404 (528)
Q Consensus 325 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~ 404 (528)
..+...++..+ .+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...|+.++++++.+|+.+. .+
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~ 231 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE---VP 231 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC---CC
T ss_pred HHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC---CC
Confidence 33444455555 899999999999999999875 4579999999 999999999998888776799999999772 23
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
..||+|++.-.. .. +..... ..+|+++.+.|||||+|++......
T Consensus 232 ~~~D~v~~~~vl------~~-------~~~~~~-------~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 232 SNGDIYLLSRII------GD-------LDEAAS-------LRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp SSCSEEEEESCG------GG-------CCHHHH-------HHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred CCCCEEEEchhc------cC-------CCHHHH-------HHHHHHHHHhcCCCCEEEEEEeccC
Confidence 579999963221 11 122222 4569999999999999998876543
No 250
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.93 E-value=6.5e-09 Score=105.76 Aligned_cols=114 Identities=13% Similarity=0.075 Sum_probs=88.1
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEE
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 411 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl 411 (528)
+..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...++.++++++.+|+.... +..||+|+
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---p~~~D~v~ 240 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPL---PAGAGGYV 240 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---CCSCSEEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCC---CCCCcEEE
Confidence 34456799999999999999999875 4579999999 9999999999999998778999999997322 23799999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCc
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDP 470 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~ 470 (528)
+-- ++.. +...+ ..++|+++.+.|||||+|++.......
T Consensus 241 ~~~------vlh~-------~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 241 LSA------VLHD-------WDDLS-------AVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp EES------CGGG-------SCHHH-------HHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred Eeh------hhcc-------CCHHH-------HHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 631 1211 12222 345699999999999999987765543
No 251
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.91 E-value=4.1e-09 Score=99.67 Aligned_cols=115 Identities=17% Similarity=0.213 Sum_probs=86.0
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCC--CccEEEEcCccccc-------------
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV--NSVIRTIHADLRTF------------- 399 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~--~~~i~~~~~D~~~~------------- 399 (528)
+..+||++|| |.-|+.+|+. . +++|+++|.+++..+.+++++++.|+ .++|+++.+|+...
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred CCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 4679999998 5778888863 3 68999999999999999999999998 77799999996542
Q ss_pred --cc-------c-CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 400 --AD-------N-STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 400 --~~-------~-~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
.. . ..+.||+||+|+... ...+..+..+|+|||+|++-.....
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~k~---------------------------~~~~~~~l~~l~~GG~Iv~DNv~~r 158 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGRFR---------------------------VGCALATAFSITRPVTLLFDDYSQR 158 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSSSH---------------------------HHHHHHHHHHCSSCEEEEETTGGGC
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCCCc---------------------------hhHHHHHHHhcCCCeEEEEeCCcCC
Confidence 10 1 126799999997640 0235557799999999987654433
Q ss_pred chhhHHHHHHHHh
Q 009708 470 PEENEERVEAFLL 482 (528)
Q Consensus 470 ~~Ene~~v~~~l~ 482 (528)
+. ...+..|+.
T Consensus 159 ~~--y~~v~~~~~ 169 (202)
T 3cvo_A 159 RW--QHQVEEFLG 169 (202)
T ss_dssp SS--GGGGHHHHC
T ss_pred cc--hHHHHHHHh
Confidence 32 234567776
No 252
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.91 E-value=3.2e-09 Score=106.07 Aligned_cols=113 Identities=11% Similarity=0.041 Sum_probs=76.9
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHc---CCCcEE--EEEcCChHHHHHHHHHHHHc-CCCc-cEEEEcCccccccc----
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCL---SGQGLV--YAIDINKGRLRILNETAKLH-QVNS-VIRTIHADLRTFAD---- 401 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~---~~~~~v--~avD~s~~~l~~~~~n~~~~-g~~~-~i~~~~~D~~~~~~---- 401 (528)
+.++.+|||+|||+|..+..++..+ .+...| +++|.|+.+++.+++++... ++.+ .+.+..+|+.++..
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 3567799999999998876554332 134544 99999999999999998764 5554 13445667655431
Q ss_pred -cCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 402 -NSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 402 -~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
...++||+|++--- +..-+| ....|+++.++|||||+|++++.+
T Consensus 130 ~~~~~~fD~V~~~~~------l~~~~d----------------~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 130 KKELQKWDFIHMIQM------LYYVKD----------------IPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp TTCCCCEEEEEEESC------GGGCSC----------------HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccCCCceeEEEEeee------eeecCC----------------HHHHHHHHHHHcCCCcEEEEEEec
Confidence 12468999996321 111111 123599999999999999987544
No 253
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.90 E-value=1.8e-09 Score=105.94 Aligned_cols=108 Identities=14% Similarity=0.161 Sum_probs=79.7
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCC
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 405 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~ 405 (528)
++...+. ++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.++++.. .+ ++++|+..++. ..+
T Consensus 47 ~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~----~~---~~~~d~~~~~~-~~~ 113 (260)
T 2avn_A 47 FLEEYLK--NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV----KN---VVEAKAEDLPF-PSG 113 (260)
T ss_dssp HHHHHCC--SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC----SC---EEECCTTSCCS-CTT
T ss_pred HHHHhcC--CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC----CC---EEECcHHHCCC-CCC
Confidence 3444443 6789999999999999999875 4689999999999999988753 22 67888877652 246
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
+||+|++..... .+......+|+++.++|||||+|++++.+
T Consensus 114 ~fD~v~~~~~~~---------------------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 114 AFEAVLALGDVL---------------------SYVENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp CEEEEEECSSHH---------------------HHCSCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CEEEEEEcchhh---------------------hccccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 899999743220 00001345699999999999999987765
No 254
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.87 E-value=2.8e-09 Score=104.81 Aligned_cols=87 Identities=17% Similarity=0.219 Sum_probs=72.4
Q ss_pred hHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc
Q 009708 323 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 402 (528)
Q Consensus 323 ~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~ 402 (528)
....++..+++.++++|||+|||+|..|..+++. .++|+|+|+|+.+++.+++++.. .. +++++++|+..+...
T Consensus 17 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~--~~-~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 17 VLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ--QK-NITIYQNDALQFDFS 90 (255)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT--CT-TEEEEESCTTTCCGG
T ss_pred HHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh--CC-CcEEEEcchHhCCHH
Confidence 4556777888889999999999999999999875 47999999999999999999865 23 489999999887532
Q ss_pred C---CCCCCEEEEcCCC
Q 009708 403 S---TVKCDKVLLDAPC 416 (528)
Q Consensus 403 ~---~~~fD~Vl~D~Pc 416 (528)
. ..+|| |+.|+|+
T Consensus 91 ~~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 91 SVKTDKPLR-VVGNLPY 106 (255)
T ss_dssp GSCCSSCEE-EEEECCH
T ss_pred HhccCCCeE-EEecCCc
Confidence 2 24677 9999998
No 255
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.85 E-value=7.1e-09 Score=101.17 Aligned_cols=94 Identities=14% Similarity=0.187 Sum_probs=75.1
Q ss_pred eEeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcc
Q 009708 317 CAVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL 396 (528)
Q Consensus 317 ~~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~ 396 (528)
|.++......++..+++.++++|||+|||+|..|..+++. .++|+|+|+|+.+++.++++++.. + +++++++|+
T Consensus 12 fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~--~-~v~~~~~D~ 85 (244)
T 1qam_A 12 FITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR---CNFVTAIEIDHKLCKTTENKLVDH--D-NFQVLNKDI 85 (244)
T ss_dssp BCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHTTTC--C-SEEEECCCG
T ss_pred ccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc---CCeEEEEECCHHHHHHHHHhhccC--C-CeEEEEChH
Confidence 3444555566777788888999999999999999999987 379999999999999999987642 3 489999999
Q ss_pred ccccccCCCCCCEEEEcCCCC
Q 009708 397 RTFADNSTVKCDKVLLDAPCS 417 (528)
Q Consensus 397 ~~~~~~~~~~fD~Vl~D~Pcs 417 (528)
.++.......| .|++|+|+.
T Consensus 86 ~~~~~~~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 86 LQFKFPKNQSY-KIFGNIPYN 105 (244)
T ss_dssp GGCCCCSSCCC-EEEEECCGG
T ss_pred HhCCcccCCCe-EEEEeCCcc
Confidence 88753322345 689999983
No 256
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.85 E-value=5e-09 Score=103.90 Aligned_cols=88 Identities=16% Similarity=0.163 Sum_probs=73.1
Q ss_pred chHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc
Q 009708 322 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 401 (528)
Q Consensus 322 ~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~ 401 (528)
.....++..+++.++ +|||+|||+|..|..+++. .++|+|+|+|+.+++.+++++.. .+++++++|+..+..
T Consensus 34 ~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~~ 105 (271)
T 3fut_A 34 AHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYPW 105 (271)
T ss_dssp HHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSCG
T ss_pred HHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCCh
Confidence 345567777888889 9999999999999999986 36899999999999999998752 348999999988754
Q ss_pred cCCCCCCEEEEcCCCC
Q 009708 402 NSTVKCDKVLLDAPCS 417 (528)
Q Consensus 402 ~~~~~fD~Vl~D~Pcs 417 (528)
.....+|.|+.|+|+.
T Consensus 106 ~~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 106 EEVPQGSLLVANLPYH 121 (271)
T ss_dssp GGSCTTEEEEEEECSS
T ss_pred hhccCccEEEecCccc
Confidence 3223689999999994
No 257
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.84 E-value=5e-09 Score=103.01 Aligned_cols=97 Identities=16% Similarity=0.170 Sum_probs=76.7
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.++.+|||+|||+|..+..+++.+ ++.+|+++|+++.+++.++++. . .+.++.+|+..++. ..++||+|++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~-----~-~~~~~~~d~~~~~~-~~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY-----P-QVTFCVASSHRLPF-SDTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC-----T-TSEEEECCTTSCSB-CTTCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC-----C-CcEEEEcchhhCCC-CCCceeEEEEe
Confidence 568899999999999999999875 3569999999999999988763 2 36788999877542 23689999963
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
... ..++++.++|||||+|++.+..
T Consensus 156 ~~~-----------------------------~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 156 YAP-----------------------------CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp SCC-----------------------------CCHHHHHHHEEEEEEEEEEEEC
T ss_pred CCh-----------------------------hhHHHHHHhcCCCcEEEEEEcC
Confidence 221 0277889999999999987654
No 258
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.83 E-value=3.6e-09 Score=105.37 Aligned_cols=111 Identities=18% Similarity=0.162 Sum_probs=73.2
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc-----------------CCC-----------
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH-----------------QVN----------- 386 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~-----------------g~~----------- 386 (528)
++.+|||+|||+|..+..++. ....+|+|+|+|+.+++.++++++.. |..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~--~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSAC--SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGG--GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhc--cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 678999999999994433332 23469999999999999998866431 100
Q ss_pred -ccEEEEcCccccccc-----cCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCE
Q 009708 387 -SVIRTIHADLRTFAD-----NSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGV 460 (528)
Q Consensus 387 -~~i~~~~~D~~~~~~-----~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~ 460 (528)
..++++++|+....+ ...++||+|++.... ..+..-......+|+++.++|||||+
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l------------------~~~~~~~~~~~~~l~~~~r~LkpGG~ 210 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCL------------------EAVSPDLASFQRALDHITTLLRPGGH 210 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCH------------------HHHCSSHHHHHHHHHHHHTTEEEEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhh------------------hhhcCCHHHHHHHHHHHHHhcCCCCE
Confidence 125677788877221 113569999974211 11000012235579999999999999
Q ss_pred EEEEc
Q 009708 461 LVYST 465 (528)
Q Consensus 461 LvysT 465 (528)
|+++.
T Consensus 211 l~~~~ 215 (289)
T 2g72_A 211 LLLIG 215 (289)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99763
No 259
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.82 E-value=6.3e-08 Score=96.08 Aligned_cols=110 Identities=15% Similarity=0.090 Sum_probs=79.6
Q ss_pred CCCeEEEeCCcc---chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc----------
Q 009708 335 PGQSIVDCCAAP---GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------- 401 (528)
Q Consensus 335 ~g~~VLDl~aG~---G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~---------- 401 (528)
+..+|||+|||+ |..+..+.+. .+..+|+++|+|+.+++.+++++.. ..+++++++|+.+...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhcc
Confidence 347999999999 9877655554 4568999999999999999998843 2358999999976421
Q ss_pred cCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 402 NSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 402 ~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
....+||.|++. +++..-++ .+. ..+|+++.+.|+|||+|++++...
T Consensus 153 ~d~~~~d~v~~~------~vlh~~~d-------~~~-------~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 153 IDFSRPAAIMLV------GMLHYLSP-------DVV-------DRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp CCTTSCCEEEET------TTGGGSCT-------TTH-------HHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCCCCEEEEEe------chhhhCCc-------HHH-------HHHHHHHHHhCCCCcEEEEEEecC
Confidence 112479999863 22222221 112 346999999999999999887654
No 260
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.81 E-value=1.3e-08 Score=97.08 Aligned_cols=94 Identities=13% Similarity=0.118 Sum_probs=71.8
Q ss_pred CCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAP 415 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~P 415 (528)
+.+|||+|||+|..+..++.. +++|+++.+++.++++ .++++++|+..++. ..++||+|++...
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~-~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--------GVFVLKGTAENLPL-KDESFDFALMVTT 111 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--------TCEEEECBTTBCCS-CTTCEEEEEEESC
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--------CCEEEEcccccCCC-CCCCeeEEEEcch
Confidence 779999999999998877531 9999999999998876 26788899877642 2468999997532
Q ss_pred CCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 416 CSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 416 csg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
. ...++ ...+|+.+.++|+|||.+++++..
T Consensus 112 l------~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 112 I------CFVDD----------------PERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp G------GGSSC----------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred H------hhccC----------------HHHHHHHHHHHcCCCcEEEEEEeC
Confidence 2 11111 134689999999999999987654
No 261
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.81 E-value=1.3e-08 Score=101.59 Aligned_cols=98 Identities=23% Similarity=0.216 Sum_probs=69.3
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc-CC-CCCCEEEE
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-ST-VKCDKVLL 412 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~-~~-~~fD~Vl~ 412 (528)
+|.+|||+|||||++|..+++. +.++|+|+|+++.+++.+.++ . ...+.+...|+..+... .+ ..||.|++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r~----~-~rv~~~~~~ni~~l~~~~l~~~~fD~v~~ 157 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKLRQ----D-DRVRSMEQYNFRYAEPVDFTEGLPSFASI 157 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHHHT----C-TTEEEECSCCGGGCCGGGCTTCCCSEEEE
T ss_pred cccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHHHh----C-cccceecccCceecchhhCCCCCCCEEEE
Confidence 5779999999999999999885 457999999999999874332 1 11122223444443321 12 34999999
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
|...... ..+|..+.++|||||.|+..
T Consensus 158 d~sf~sl-------------------------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 158 DVSFISL-------------------------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CCSSSCG-------------------------GGTHHHHHHHSCTTCEEEEE
T ss_pred EeeHhhH-------------------------HHHHHHHHHHcCcCCEEEEE
Confidence 9765321 23588999999999999976
No 262
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.81 E-value=6.6e-09 Score=98.80 Aligned_cols=107 Identities=13% Similarity=0.131 Sum_probs=78.5
Q ss_pred HHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc-CCC
Q 009708 327 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-STV 405 (528)
Q Consensus 327 ~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~-~~~ 405 (528)
+...+. .++.+|||+|||+|..+..+++. ..+++++|+++.+++.++++. .+++++|+...... ..+
T Consensus 25 l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~ 92 (230)
T 3cc8_A 25 LLKHIK-KEWKEVLDIGCSSGALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEE 92 (230)
T ss_dssp HHTTCC-TTCSEEEEETCTTSHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTT
T ss_pred HHHHhc-cCCCcEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCC
Confidence 344444 57889999999999999999876 379999999999999887653 25778888764222 246
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
+||+|++.... ...++ ...+++.+.++|+|||++++++..
T Consensus 93 ~fD~v~~~~~l------~~~~~----------------~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 93 QFDCVIFGDVL------EHLFD----------------PWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp CEEEEEEESCG------GGSSC----------------HHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred ccCEEEECChh------hhcCC----------------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 89999974322 21111 125699999999999999987643
No 263
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.79 E-value=3.9e-09 Score=102.30 Aligned_cols=98 Identities=19% Similarity=0.223 Sum_probs=68.1
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc-ccCCC-CCCEEEE
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DNSTV-KCDKVLL 412 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~-~~~~~-~fD~Vl~ 412 (528)
+|.+|||+|||+|+.+..+++. +..+|+|+|+|+.+++.++++..+.. .....++.... ..... .||.+.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~~ml~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGTNQLAWKIRSDERVV-----VMEQFNFRNAVLADFEQGRPSFTSI 109 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSCCCCCHHHHTCTTEE-----EECSCCGGGCCGGGCCSCCCSEEEE
T ss_pred CCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCHHHHHHHHHhCcccc-----ccccceEEEeCHhHcCcCCCCEEEE
Confidence 4679999999999999999986 34599999999999998766533221 11112222211 11112 3788888
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
|...+.. ..+|..+.++|||||.+++.
T Consensus 110 D~v~~~l-------------------------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 110 DVSFISL-------------------------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CCSSSCG-------------------------GGTHHHHHHHSCTTCEEEEE
T ss_pred EEEhhhH-------------------------HHHHHHHHHhccCCCEEEEE
Confidence 8777531 23589999999999999975
No 264
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.77 E-value=8.9e-09 Score=106.61 Aligned_cols=100 Identities=22% Similarity=0.191 Sum_probs=74.9
Q ss_pred CCCeEEEeCCc------cchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc-----C
Q 009708 335 PGQSIVDCCAA------PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-----S 403 (528)
Q Consensus 335 ~g~~VLDl~aG------~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~-----~ 403 (528)
++.+|||+||| +|+.++.+++...+.++|+|+|+|+.+. ... .+++++++|+.+++.. .
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~-~rI~fv~GDa~dlpf~~~l~~~ 285 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDE-LRIRTIQGDQNDAEFLDRIARR 285 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCB-TTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcC-CCcEEEEecccccchhhhhhcc
Confidence 45799999999 7888888887654578999999999972 122 3599999999875422 0
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
.++||+|++|.-. . ...+...|++++++|||||++++.+..
T Consensus 286 d~sFDlVisdgsH--------~---------------~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 286 YGPFDIVIDDGSH--------I---------------NAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HCCEEEEEECSCC--------C---------------HHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cCCccEEEECCcc--------c---------------chhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 3689999986321 0 012355799999999999999987654
No 265
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.74 E-value=2e-08 Score=99.67 Aligned_cols=109 Identities=18% Similarity=0.179 Sum_probs=76.3
Q ss_pred CCeEEEeCCccch----HHHHHHHHcCC---CcEEEEEcCChHHHHHHHHHHH--------------H---------cC-
Q 009708 336 GQSIVDCCAAPGG----KTLYMASCLSG---QGLVYAIDINKGRLRILNETAK--------------L---------HQ- 384 (528)
Q Consensus 336 g~~VLDl~aG~G~----kt~~la~~~~~---~~~v~avD~s~~~l~~~~~n~~--------------~---------~g- 384 (528)
+.+|||+|||+|. .++.+++.++. +.+|+|+|+|+.+++.|++++. + .|
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4689999999998 55666665442 3589999999999999998741 0 01
Q ss_pred ------CCccEEEEcCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCC
Q 009708 385 ------VNSVIRTIHADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPG 458 (528)
Q Consensus 385 ------~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpG 458 (528)
+...|++.++|+.+.+....++||+|+|- . ++.. .++ ..|.+++....+.|+||
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~cr----n--vliy-------f~~-------~~~~~vl~~~~~~L~pg 245 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCR----N--VMIY-------FDK-------TTQEDILRRFVPLLKPD 245 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEEC----S--SGGG-------SCH-------HHHHHHHHHHGGGEEEE
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEEC----C--chHh-------CCH-------HHHHHHHHHHHHHhCCC
Confidence 01258999999987322113679999971 1 1111 111 23577899999999999
Q ss_pred CEEEEE
Q 009708 459 GVLVYS 464 (528)
Q Consensus 459 G~Lvys 464 (528)
|+|+..
T Consensus 246 G~L~lg 251 (274)
T 1af7_A 246 GLLFAG 251 (274)
T ss_dssp EEEEEC
T ss_pred cEEEEE
Confidence 999863
No 266
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.72 E-value=3.5e-08 Score=101.20 Aligned_cols=116 Identities=13% Similarity=0.101 Sum_probs=82.8
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCC
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 405 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~ 405 (528)
.+...++..++.+|||+|||+|..+..+++.. +..+++++|+ +..+. +++++..+..++++++.+|+.... +
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~---p- 246 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREV---P- 246 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCC---C-
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCC---C-
Confidence 44555667778899999999999999999875 4678999999 44444 444444566667999999997322 2
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
.||+|++.- ++.. +...+. ..+|+++.+.|||||+|++.+....
T Consensus 247 ~~D~v~~~~------vlh~-------~~d~~~-------~~~L~~~~~~LkpgG~l~i~e~~~~ 290 (348)
T 3lst_A 247 HADVHVLKR------ILHN-------WGDEDS-------VRILTNCRRVMPAHGRVLVIDAVVP 290 (348)
T ss_dssp CCSEEEEES------CGGG-------SCHHHH-------HHHHHHHHHTCCTTCEEEEEECCBC
T ss_pred CCcEEEEeh------hccC-------CCHHHH-------HHHHHHHHHhcCCCCEEEEEEeccC
Confidence 799999732 1211 122222 3569999999999999998776543
No 267
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.70 E-value=3.2e-08 Score=98.53 Aligned_cols=90 Identities=17% Similarity=0.235 Sum_probs=70.9
Q ss_pred chHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCC-CcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc
Q 009708 322 ESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA 400 (528)
Q Consensus 322 ~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~-~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~ 400 (528)
.....++..+++.++++|||+|||+|..|..+++.... .++|+|+|+|+.+++.++++. ..+++++++|+..+.
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~~ 103 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTFD 103 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcCC
Confidence 34456677788889999999999999999999987432 245999999999999999983 235899999998865
Q ss_pred ccC-CC----CCCEEEEcCCC
Q 009708 401 DNS-TV----KCDKVLLDAPC 416 (528)
Q Consensus 401 ~~~-~~----~fD~Vl~D~Pc 416 (528)
... .. ..+.|+.|+|+
T Consensus 104 ~~~~~~~~~~~~~~vv~NlPY 124 (279)
T 3uzu_A 104 FGSIARPGDEPSLRIIGNLPY 124 (279)
T ss_dssp GGGGSCSSSSCCEEEEEECCH
T ss_pred hhHhcccccCCceEEEEccCc
Confidence 321 11 34579999998
No 268
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.70 E-value=4.5e-08 Score=96.72 Aligned_cols=113 Identities=12% Similarity=0.025 Sum_probs=80.0
Q ss_pred CCeEEEeCCcc--chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc-----CCCCCC
Q 009708 336 GQSIVDCCAAP--GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-----STVKCD 408 (528)
Q Consensus 336 g~~VLDl~aG~--G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~-----~~~~fD 408 (528)
...|||+|||+ |+.+..+++...+..+|+++|.|+.++..++.++...+. .+++++++|+.+.... ....||
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~-~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE-GRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS-SEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC-CcEEEEEecccChhhhhcccccccccC
Confidence 36899999997 666777777666788999999999999999988865433 3589999999886310 013354
Q ss_pred -----EEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCC
Q 009708 409 -----KVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 409 -----~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~ 468 (528)
.|+++ +++..-++ ..+ ...++....+.|+|||+|++++.+-
T Consensus 158 ~~~p~av~~~------avLH~l~d------~~~-------p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 158 LTRPVALTVI------AIVHFVLD------EDD-------AVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp TTSCCEEEEE------SCGGGSCG------GGC-------HHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred cCCcchHHhh------hhHhcCCc------hhh-------HHHHHHHHHHhCCCCcEEEEEeccC
Confidence 45542 33333222 111 1346899999999999999987654
No 269
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.69 E-value=2.9e-08 Score=97.21 Aligned_cols=93 Identities=17% Similarity=0.210 Sum_probs=71.9
Q ss_pred EeecchHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccc
Q 009708 318 AVQDESAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR 397 (528)
Q Consensus 318 ~~Qd~~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~ 397 (528)
..+......++..+.+.++++|||+|||+|..|..+++. +..+|+|+|+|+.+++.++++ +.. +++++++|+.
T Consensus 14 l~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~~~-~v~~i~~D~~ 86 (249)
T 3ftd_A 14 LVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI----GDE-RLEVINEDAS 86 (249)
T ss_dssp EECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----CCT-TEEEECSCTT
T ss_pred cCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----cCC-CeEEEEcchh
Confidence 333444566777788888999999999999999999875 347999999999999999887 223 4899999998
Q ss_pred cccccCCCCCCEEEEcCCCC
Q 009708 398 TFADNSTVKCDKVLLDAPCS 417 (528)
Q Consensus 398 ~~~~~~~~~fD~Vl~D~Pcs 417 (528)
.+..........|+.|+|+.
T Consensus 87 ~~~~~~~~~~~~vv~NlPy~ 106 (249)
T 3ftd_A 87 KFPFCSLGKELKVVGNLPYN 106 (249)
T ss_dssp TCCGGGSCSSEEEEEECCTT
T ss_pred hCChhHccCCcEEEEECchh
Confidence 86533211134899999994
No 270
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.67 E-value=2.3e-08 Score=96.61 Aligned_cols=103 Identities=19% Similarity=0.191 Sum_probs=68.6
Q ss_pred CCCCCeEEEeCCccchHHHHHHHH--cCC-CcEEEEEcC--ChHHHHHHHHHHHHcCCCccEEEEcC-ccccccccCCCC
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASC--LSG-QGLVYAIDI--NKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVK 406 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~--~~~-~~~v~avD~--s~~~l~~~~~n~~~~g~~~~i~~~~~-D~~~~~~~~~~~ 406 (528)
++||.+|||||||||+++..++++ ++. .|.++|+|+ .|-... -.|+ +.+++.++ |++.+. +.+
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~-------~~Gv-~~i~~~~G~Df~~~~---~~~ 139 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQ-------SYGW-NIVTMKSGVDVFYKP---SEI 139 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCC-------STTG-GGEEEECSCCGGGSC---CCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCccc-------CCCc-eEEEeeccCCccCCC---CCC
Confidence 578999999999999999999986 322 356777773 221100 0122 23566667 998744 357
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCC-EEE
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGG-VLV 462 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG-~Lv 462 (528)
+|+||+|...+ +|. ..+++...+. .|+-|.++|+||| .++
T Consensus 140 ~DvVLSDMAPn-SG~-------------~~vD~~Rs~~--aL~~A~~~Lk~gG~~Fv 180 (269)
T 2px2_A 140 SDTLLCDIGES-SPS-------------AEIEEQRTLR--ILEMVSDWLSRGPKEFC 180 (269)
T ss_dssp CSEEEECCCCC-CSC-------------HHHHHHHHHH--HHHHHHHHHTTCCSEEE
T ss_pred CCEEEeCCCCC-CCc-------------cHHHHHHHHH--HHHHHHHHhhcCCcEEE
Confidence 99999995444 665 2233222222 6788889999999 887
No 271
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.67 E-value=3.8e-08 Score=93.23 Aligned_cols=116 Identities=15% Similarity=0.129 Sum_probs=79.2
Q ss_pred HHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCC
Q 009708 328 VAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 407 (528)
Q Consensus 328 ~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~f 407 (528)
..+....++.+|||+|||+|..+..++ .+|+++|+++. .++++++|+..++. ..++|
T Consensus 60 ~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------------~~~~~~~d~~~~~~-~~~~f 116 (215)
T 2zfu_A 60 RDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL----------------DPRVTVCDMAQVPL-EDESV 116 (215)
T ss_dssp HHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS----------------STTEEESCTTSCSC-CTTCE
T ss_pred HHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------------CceEEEeccccCCC-CCCCE
Confidence 333334567899999999999887662 57999999988 14577888877542 24679
Q ss_pred CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCCc
Q 009708 408 DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPEF 487 (528)
Q Consensus 408 D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~~ 487 (528)
|+|++.... . .++ ...+|+.+.++|+|||.++++++.... ...+.+..++.+. +|
T Consensus 117 D~v~~~~~l------~-~~~----------------~~~~l~~~~~~L~~gG~l~i~~~~~~~-~~~~~~~~~l~~~-Gf 171 (215)
T 2zfu_A 117 DVAVFCLSL------M-GTN----------------IRDFLEEANRVLKPGGLLKVAEVSSRF-EDVRTFLRAVTKL-GF 171 (215)
T ss_dssp EEEEEESCC------C-SSC----------------HHHHHHHHHHHEEEEEEEEEEECGGGC-SCHHHHHHHHHHT-TE
T ss_pred eEEEEehhc------c-ccC----------------HHHHHHHHHHhCCCCeEEEEEEcCCCC-CCHHHHHHHHHHC-CC
Confidence 999974332 1 111 134688999999999999988765321 1344556666664 56
Q ss_pred eEec
Q 009708 488 SIDP 491 (528)
Q Consensus 488 ~~~~ 491 (528)
++..
T Consensus 172 ~~~~ 175 (215)
T 2zfu_A 172 KIVS 175 (215)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6544
No 272
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.66 E-value=4.2e-09 Score=110.54 Aligned_cols=110 Identities=14% Similarity=0.115 Sum_probs=76.8
Q ss_pred HHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEE-EEcCccccccccCCC
Q 009708 327 VVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIR-TIHADLRTFADNSTV 405 (528)
Q Consensus 327 ~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~-~~~~D~~~~~~~~~~ 405 (528)
+...+.+.++.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.++++ ++..... +...+...++. ..+
T Consensus 99 l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~-~~~ 170 (416)
T 4e2x_A 99 FLATELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRR-TEG 170 (416)
T ss_dssp HHHTTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHH-HHC
T ss_pred HHHHhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhccc-CCC
Confidence 344456678899999999999999999875 45999999999999988765 5543211 12233333321 236
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
+||+|++.- ++.+-++ ...+|+.+.++|||||+|++.+-
T Consensus 171 ~fD~I~~~~------vl~h~~d----------------~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 171 PANVIYAAN------TLCHIPY----------------VQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp CEEEEEEES------CGGGCTT----------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEEEECC------hHHhcCC----------------HHHHHHHHHHHcCCCeEEEEEeC
Confidence 899999742 2222221 24569999999999999998753
No 273
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.64 E-value=1.4e-08 Score=99.57 Aligned_cols=126 Identities=18% Similarity=0.092 Sum_probs=77.7
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcC-ccccccccCCCCCCEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKCDKVL 411 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~-D~~~~~~~~~~~fD~Vl 411 (528)
+.++.+|||||||||+++..++..+ +...|+++|+.......... .+..+. +.+.+... |...+. ..++|+|+
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~-~~~~g~-~ii~~~~~~dv~~l~---~~~~DvVL 161 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIM-RTTLGW-NLIRFKDKTDVFNME---VIPGDTLL 161 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCGGGSC---CCCCSEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCccccccc-cccCCC-ceEEeeCCcchhhcC---CCCcCEEE
Confidence 5678899999999999999888753 45679999997653211100 001121 22333322 443332 46899999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCC--CEEEEEcCCCCc--hhhHHHHHHHHhh
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPG--GVLVYSTCSIDP--EENEERVEAFLLR 483 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpG--G~LvysTcs~~~--~Ene~~v~~~l~~ 483 (528)
+|.... +|. ..+++.. +..+|+-|..+|+|| |.+| |.++. .+....+.+.+++
T Consensus 162 SDmApn-sG~-------------~~~D~~r--s~~LL~~A~~~Lk~g~~G~Fv---~KvF~pyg~~~~~l~~~lk~ 218 (282)
T 3gcz_A 162 CDIGES-SPS-------------IAVEEQR--TLRVLNCAKQWLQEGNYTEFC---IKVLCPYTPLIMEELSRLQL 218 (282)
T ss_dssp ECCCCC-CSC-------------HHHHHHH--HHHHHHHHHHHHHHHCCCEEE---EEESCCCSHHHHHHHHHHHH
T ss_pred ecCccC-CCC-------------hHHHHHH--HHHHHHHHHHHcCCCCCCcEE---EEEecCCCccHHHHHHHHHH
Confidence 996555 665 2333332 223499999999999 9999 55555 4443333444444
No 274
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.62 E-value=3.8e-08 Score=95.88 Aligned_cols=107 Identities=19% Similarity=0.092 Sum_probs=80.4
Q ss_pred CCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAP 415 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~P 415 (528)
..+|||+|||.|-+++.++.. .+..+++|+|+++.+++.+++|+..+|+. .++...|...-.. ++.||+||+.
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~-~p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~p--~~~~DvaL~l-- 205 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGL-PAETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDRL--DEPADVTLLL-- 205 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTC-CTTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSCC--CSCCSEEEET--
T ss_pred CceeeeeccCccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccCC--CCCcchHHHH--
Confidence 459999999999999988764 45789999999999999999999999987 5677788765443 4789999873
Q ss_pred CCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEE-EEcCCC
Q 009708 416 CSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLV-YSTCSI 468 (528)
Q Consensus 416 csg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lv-ysTcs~ 468 (528)
.-+..+...|+..+-..+..|+++|.+| +-|-|+
T Consensus 206 -------------------kti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl 240 (281)
T 3lcv_B 206 -------------------KTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSL 240 (281)
T ss_dssp -------------------TCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC--
T ss_pred -------------------HHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhh
Confidence 1233333334433337889999999888 445343
No 275
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.61 E-value=1.1e-07 Score=91.71 Aligned_cols=106 Identities=17% Similarity=0.136 Sum_probs=78.0
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDA 414 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~ 414 (528)
+..+|||+|||.|-+++.++ +..+++|+|+|+.+++.+++++..+|.+ ..+..+|....+. ++.||+|++.
T Consensus 105 ~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~--~~~~v~D~~~~~~--~~~~DvvLll- 175 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWD--FTFALQDVLCAPP--AEAGDLALIF- 175 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCE--EEEEECCTTTSCC--CCBCSEEEEE-
T ss_pred CCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeecccCCC--CCCcchHHHH-
Confidence 45699999999999988766 4789999999999999999999999854 6788888876553 3689999863
Q ss_pred CCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEE-EEcCCCC
Q 009708 415 PCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLV-YSTCSID 469 (528)
Q Consensus 415 Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lv-ysTcs~~ 469 (528)
.-+..+...++..+......|+++|.+| +-|-|+.
T Consensus 176 --------------------k~lh~LE~q~~~~~~~ll~aL~~~~vvVsfPtksl~ 211 (253)
T 3frh_A 176 --------------------KLLPLLEREQAGSAMALLQSLNTPRMAVSFPTRSLG 211 (253)
T ss_dssp --------------------SCHHHHHHHSTTHHHHHHHHCBCSEEEEEEECC---
T ss_pred --------------------HHHHHhhhhchhhHHHHHHHhcCCCEEEEcChHHhc
Confidence 1223333344444557778999998777 3344544
No 276
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.60 E-value=2.3e-07 Score=90.91 Aligned_cols=112 Identities=16% Similarity=0.127 Sum_probs=68.5
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEE
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVL 411 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl 411 (528)
.++++.+|||||||||+++..+++.. +...++|+|+.......... ....|. +.+. +..++.. .....++||+|+
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~pi~-~~~~g~-~ii~-~~~~~dv-~~l~~~~~DlVl 145 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKPMN-VQSLGW-NIIT-FKDKTDI-HRLEPVKCDTLL 145 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCCCC-CCBTTG-GGEE-EECSCCT-TTSCCCCCSEEE
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCcccccc-cCcCCC-CeEE-Eecccee-hhcCCCCccEEE
Confidence 35678899999999999999888753 34578888887432100000 000111 3333 4444311 112246899999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCC-CEEEEE
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPG-GVLVYS 464 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpG-G~Lvys 464 (528)
+|.... +|. ..++.... ..+|+.|.++|+|| |.+|..
T Consensus 146 sD~apn-sG~-------------~~~D~~rs--~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 146 CDIGES-SSS-------------SVTEGERT--VRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp ECCCCC-CSC-------------HHHHHHHH--HHHHHHHHHHHTTCCSEEEEE
T ss_pred ecCccC-cCc-------------hHHHHHHH--HHHHHHHHHHhCCCCCeEEEE
Confidence 996555 565 22333322 23489999999999 999954
No 277
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.58 E-value=3.8e-07 Score=93.77 Aligned_cols=119 Identities=17% Similarity=0.121 Sum_probs=87.3
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCC
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTV 405 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~ 405 (528)
.+....+..+..+|+|+|||+|..+..+++.. +..+++..|. |..++.+++++...+. ++|+++.+|++..+ ..
T Consensus 170 ~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~~-~rv~~~~gD~~~~~---~~ 243 (353)
T 4a6d_A 170 SVLTAFDLSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQEE-EQIDFQEGDFFKDP---LP 243 (353)
T ss_dssp HHHHSSCGGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC--C-CSEEEEESCTTTSC---CC
T ss_pred HHHHhcCcccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhccc-CceeeecCccccCC---CC
Confidence 34445566667899999999999999999985 4678999997 8899999988876554 46999999997643 23
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCc
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDP 470 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~ 470 (528)
.+|+|++- .++ +.++.++. .++|+++.+.|+|||+|++....+.+
T Consensus 244 ~~D~~~~~------~vl-------h~~~d~~~-------~~iL~~~~~al~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 244 EADLYILA------RVL-------HDWADGKC-------SHLLERIYHTCKPGGGILVIESLLDE 288 (353)
T ss_dssp CCSEEEEE------SSG-------GGSCHHHH-------HHHHHHHHHHCCTTCEEEEEECCCCT
T ss_pred CceEEEee------eec-------ccCCHHHH-------HHHHHHHHhhCCCCCEEEEEEeeeCC
Confidence 58999861 112 12233333 34599999999999999988766544
No 278
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.57 E-value=3.2e-07 Score=91.15 Aligned_cols=125 Identities=12% Similarity=0.101 Sum_probs=96.1
Q ss_pred CCeEEEeCCccchHHHHHHHHcC----CCcEEEEEcCCh--------------------------HHHHHHHHHHHHcCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS----GQGLVYAIDINK--------------------------GRLRILNETAKLHQV 385 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~----~~~~v~avD~s~--------------------------~~l~~~~~n~~~~g~ 385 (528)
...||++|++.|+.++.++..+. +.++|+++|..+ ..++.+++|+++.|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 34899999999999999988764 367899999642 147789999999999
Q ss_pred C-ccEEEEcCccccccccC-CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEE
Q 009708 386 N-SVIRTIHADLRTFADNS-TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVY 463 (528)
Q Consensus 386 ~-~~i~~~~~D~~~~~~~~-~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvy 463 (528)
. ++|+++.+|+.+..+.. .++||.|++|+-. ..-+...|+.++..|+|||+||+
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~------------------------y~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL------------------------YESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS------------------------HHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc------------------------cccHHHHHHHHHhhcCCCEEEEE
Confidence 4 67999999998765543 4689999999643 01123468889999999999998
Q ss_pred EcCCCCchhhHHHHHHHHhhCC
Q 009708 464 STCSIDPEENEERVEAFLLRHP 485 (528)
Q Consensus 464 sTcs~~~~Ene~~v~~~l~~~~ 485 (528)
-...+.+.+ ...+.+|++++.
T Consensus 243 DD~~~~~G~-~~Av~Ef~~~~~ 263 (282)
T 2wk1_A 243 DDYMMCPPC-KDAVDEYRAKFD 263 (282)
T ss_dssp SSCTTCHHH-HHHHHHHHHHTT
T ss_pred cCCCCCHHH-HHHHHHHHHhcC
Confidence 776443443 556788888764
No 279
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.54 E-value=3.4e-07 Score=90.38 Aligned_cols=127 Identities=12% Similarity=-0.006 Sum_probs=77.3
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcC-ccccccccCCCCCCEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKCDKVL 411 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~-D~~~~~~~~~~~fD~Vl 411 (528)
..+|.+|||+|||||+++..+++.+ +...|+|+|+.......... .+..+. +.+.+... |+..+. +.++|+|+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~l~---~~~~DlVl 152 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFTMP---TEPSDTLL 152 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTTSC---CCCCSEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEecccccccccc-ccccCC-ceEEeecCceeeecC---CCCcCEEe
Confidence 3578899999999999999998753 34579999997532100000 000111 22333322 333322 46899999
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCC-CEEEEEcCCCCc--hhhHHHHHHHHhhC
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPG-GVLVYSTCSIDP--EENEERVEAFLLRH 484 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpG-G~LvysTcs~~~--~Ene~~v~~~l~~~ 484 (528)
+|.... +|. ..+++. .|..+|+-|..+|+|| |.+| |.++. .+....+.+.++++
T Consensus 153 sD~APn-sG~-------------~~~D~~--rs~~LL~~A~~~LkpG~G~FV---~KvF~~yG~~~~~ll~~lk~~ 209 (300)
T 3eld_A 153 CDIGES-SSN-------------PLVERD--RTMKVLENFERWKHVNTENFC---VKVLAPYHPDVIEKLERLQLR 209 (300)
T ss_dssp ECCCCC-CSS-------------HHHHHH--HHHHHHHHHHHHCCTTCCEEE---EEESSTTSHHHHHHHHHHHHH
T ss_pred ecCcCC-CCC-------------HHHHHH--HHHHHHHHHHHHhcCCCCcEE---EEeccccCccHHHHHHHHHHh
Confidence 997766 676 233333 2334599999999999 9999 55555 44443344444443
No 280
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.53 E-value=6.8e-08 Score=94.75 Aligned_cols=89 Identities=17% Similarity=0.173 Sum_probs=68.0
Q ss_pred hHHHHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc
Q 009708 323 SAGLVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN 402 (528)
Q Consensus 323 ~s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~ 402 (528)
....++..+++.++++|||+|||+|..|. ++ . ....+|+|+|+++.+++.+++++... + +++++++|+..+...
T Consensus 9 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~~--~-~v~~i~~D~~~~~~~ 82 (252)
T 1qyr_A 9 VIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFLG--P-KLTIYQQDAMTFNFG 82 (252)
T ss_dssp HHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTTG--G-GEEEECSCGGGCCHH
T ss_pred HHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhccC--C-ceEEEECchhhCCHH
Confidence 34556677788889999999999999999 64 3 22223999999999999999877543 2 599999999886421
Q ss_pred C----CCCCCEEEEcCCCC
Q 009708 403 S----TVKCDKVLLDAPCS 417 (528)
Q Consensus 403 ~----~~~fD~Vl~D~Pcs 417 (528)
. ....|.|+.|+|+.
T Consensus 83 ~~~~~~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 83 ELAEKMGQPLRVFGNLPYN 101 (252)
T ss_dssp HHHHHHTSCEEEEEECCTT
T ss_pred HhhcccCCceEEEECCCCC
Confidence 1 12457999999994
No 281
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.53 E-value=9.1e-08 Score=94.32 Aligned_cols=85 Identities=16% Similarity=0.246 Sum_probs=71.2
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC--
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-- 403 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~-- 403 (528)
-+++.+.+++|+.+||++||.||.|..+++. +++|+|+|.++.+++.+++ ++. ++++++++++.++....
T Consensus 13 e~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~ 84 (285)
T 1wg8_A 13 EALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAA 84 (285)
T ss_dssp HHHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHH
Confidence 4556778889999999999999999999986 5899999999999999987 543 36999999998874321
Q ss_pred --CCCCCEEEEcCCCCC
Q 009708 404 --TVKCDKVLLDAPCSG 418 (528)
Q Consensus 404 --~~~fD~Vl~D~Pcsg 418 (528)
..+||.|++|..+|+
T Consensus 85 ~g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 85 LGVERVDGILADLGVSS 101 (285)
T ss_dssp TTCSCEEEEEEECSCCH
T ss_pred cCCCCcCEEEeCCcccc
Confidence 257999999998776
No 282
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.51 E-value=1.9e-07 Score=91.83 Aligned_cols=134 Identities=19% Similarity=0.248 Sum_probs=90.2
Q ss_pred CCCCeEEEeCCccchHHHHHHHHc------CCC-----cEEEEEcCCh---HHHH-----------HHHHHHHHc-----
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCL------SGQ-----GLVYAIDINK---GRLR-----------ILNETAKLH----- 383 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~------~~~-----~~v~avD~s~---~~l~-----------~~~~n~~~~----- 383 (528)
.++.+|||+|+|+|..++.+++.. .+. .+++++|..| +.+. .++.+++..
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 355699999999999998877654 332 5899999987 4433 566666641
Q ss_pred -----CCC---ccEEEEcCccccccccCCC----CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHH
Q 009708 384 -----QVN---SVIRTIHADLRTFADNSTV----KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAA 451 (528)
Q Consensus 384 -----g~~---~~i~~~~~D~~~~~~~~~~----~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a 451 (528)
.+. .+++++.+|+.+..+.... .||+|++|+-. -.++|++ |. .++++.+
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fs-----p~~~p~l-w~-------------~~~l~~l 199 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFA-----PAKNPDM-WT-------------QNLFNAM 199 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSC-----TTTCGGG-CC-------------HHHHHHH
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCC-----cccChhh-cC-------------HHHHHHH
Confidence 121 2478999999886544322 79999999722 1245542 32 3568889
Q ss_pred hccCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCCceEecCCC
Q 009708 452 SLLVKPGGVLVYSTCSIDPEENEERVEAFLLRHPEFSIDPADG 494 (528)
Q Consensus 452 ~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~~~~~ 494 (528)
.++|+|||+|+..|+. ..|..-|.. -+|.+...+.
T Consensus 200 ~~~L~pGG~l~tysaa-------~~vrr~L~~-aGF~v~~~~g 234 (257)
T 2qy6_A 200 ARLARPGGTLATFTSA-------GFVRRGLQE-AGFTMQKRKG 234 (257)
T ss_dssp HHHEEEEEEEEESCCB-------HHHHHHHHH-HTEEEEEECC
T ss_pred HHHcCCCcEEEEEeCC-------HHHHHHHHH-CCCEEEeCCC
Confidence 9999999999843332 245555555 3788776543
No 283
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.46 E-value=6.2e-07 Score=92.64 Aligned_cols=104 Identities=13% Similarity=0.092 Sum_probs=76.2
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++ .+++++.+|+.+.. +.. |+|++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~~---p~~-D~v~~ 267 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFDGV---PKG-DAIFI 267 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTCC---CCC-SEEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCCCC---CCC-CEEEE
Confidence 4567899999999999999999885 4678999999 8888665431 35999999998622 223 99986
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
.-.. . .+...+. .++|+++.+.|||||+|++....+.
T Consensus 268 ~~vl------h-------~~~~~~~-------~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 268 KWIC------H-------DWSDEHC-------LKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp ESCG------G-------GBCHHHH-------HHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred echh------h-------cCCHHHH-------HHHHHHHHHHcCCCCEEEEEEeccC
Confidence 3221 1 1222222 3469999999999999998877654
No 284
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.46 E-value=1.2e-06 Score=87.26 Aligned_cols=137 Identities=12% Similarity=0.229 Sum_probs=96.6
Q ss_pred cCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc--C-C-CccEEEEcCccccccccCCCC
Q 009708 331 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH--Q-V-NSVIRTIHADLRTFADNSTVK 406 (528)
Q Consensus 331 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~--g-~-~~~i~~~~~D~~~~~~~~~~~ 406 (528)
+.+.| .+||=+|.|.|+.+..+++. .+..+|+.||+++..++.+++.+... + . +.+++++.+|+..+.....++
T Consensus 80 ~~p~p-k~VLIiGgGdG~~~revlk~-~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~ 157 (294)
T 3o4f_A 80 AHGHA-KHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQT 157 (294)
T ss_dssp HSSCC-CEEEEESCTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCC
T ss_pred hCCCC-CeEEEECCCchHHHHHHHHc-CCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhcccc
Confidence 34444 58999999999999998875 34569999999999999999987542 2 1 357999999999998776789
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc--CCCCchhhHHHHHHHHhhC
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST--CSIDPEENEERVEAFLLRH 484 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT--cs~~~~Ene~~v~~~l~~~ 484 (528)
||+|++|.+-. .|. +... ...++++.+.+.|+|||+++.-+ +.++++.-......+-+-.
T Consensus 158 yDvIi~D~~dp-~~~----~~~L-------------~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F 219 (294)
T 3o4f_A 158 FDVIISDCTDP-IGP----GESL-------------FTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYF 219 (294)
T ss_dssp EEEEEESCCCC-CCT----TCCS-------------SCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCc-CCC----chhh-------------cCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhC
Confidence 99999997642 121 1101 11346888999999999999643 3344444444444444445
Q ss_pred CCc
Q 009708 485 PEF 487 (528)
Q Consensus 485 ~~~ 487 (528)
|..
T Consensus 220 ~~v 222 (294)
T 3o4f_A 220 SDV 222 (294)
T ss_dssp SEE
T ss_pred Cce
Confidence 543
No 285
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.45 E-value=1.3e-07 Score=95.20 Aligned_cols=89 Identities=22% Similarity=0.300 Sum_probs=73.4
Q ss_pred HHHHhcCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC--
Q 009708 326 LVVAVVDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-- 403 (528)
Q Consensus 326 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~-- 403 (528)
-+++.|.++||+.++|+++|.||.|..+++.+++.|+|+|+|+++.+++.++ ++ . .++++++++++.++....
T Consensus 48 Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~-~~Rv~lv~~nF~~l~~~L~~ 122 (347)
T 3tka_A 48 EAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---D-DPRFSIIHGPFSALGEYVAE 122 (347)
T ss_dssp HHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---C-CTTEEEEESCGGGHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---c-CCcEEEEeCCHHHHHHHHHh
Confidence 3556778899999999999999999999998888899999999999999884 33 2 357999999998875321
Q ss_pred ---CCCCCEEEEcCCCCCC
Q 009708 404 ---TVKCDKVLLDAPCSGL 419 (528)
Q Consensus 404 ---~~~fD~Vl~D~Pcsg~ 419 (528)
.+++|.|+.|..+|+.
T Consensus 123 ~g~~~~vDgILfDLGVSS~ 141 (347)
T 3tka_A 123 RDLIGKIDGILLDLGVSSP 141 (347)
T ss_dssp TTCTTCEEEEEEECSCCHH
T ss_pred cCCCCcccEEEECCccCHH
Confidence 1369999999988764
No 286
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.43 E-value=3.4e-07 Score=100.16 Aligned_cols=73 Identities=14% Similarity=0.088 Sum_probs=63.6
Q ss_pred CCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc-CCCCCCEEEE
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-STVKCDKVLL 412 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~-~~~~fD~Vl~ 412 (528)
+.+|||+|||.|..+..||++ +..|+|||.++..++.|+..+...|..+ |++.++|+.++... ..++||+|++
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFA-AEFRVGRIEEVIAALEEGEFDLAIG 140 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSE-EEEEECCHHHHHHHCCTTSCSEEEE
T ss_pred CCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCc-eEEEECCHHHHhhhccCCCccEEEE
Confidence 469999999999999999986 5799999999999999999999888654 89999999887543 2468999996
No 287
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.40 E-value=9.7e-07 Score=91.08 Aligned_cols=109 Identities=13% Similarity=0.112 Sum_probs=78.1
Q ss_pred HHhcC-CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCC
Q 009708 328 VAVVD-PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVK 406 (528)
Q Consensus 328 ~~~l~-~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~ 406 (528)
...+. ..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++ .+++++.+|+.+ + .. ..
T Consensus 193 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~-~-~p-~~ 260 (364)
T 3p9c_A 193 LELYHGFEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK-E-VP-SG 260 (364)
T ss_dssp HHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-C-CC-CC
T ss_pred HHhcccccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC-C-CC-CC
Confidence 33444 5667899999999999999999875 4578999999 8887665431 359999999986 2 11 23
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
|+|++--- +. .+..++. .++|+++.+.|||||+|++....+.
T Consensus 261 -D~v~~~~v------lh-------~~~d~~~-------~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 261 -DTILMKWI------LH-------DWSDQHC-------ATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp -SEEEEESC------GG-------GSCHHHH-------HHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred -CEEEehHH------hc-------cCCHHHH-------HHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99986221 11 1222333 3469999999999999998776544
No 288
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.36 E-value=4.3e-07 Score=99.52 Aligned_cols=111 Identities=21% Similarity=0.173 Sum_probs=81.2
Q ss_pred CCeEEEeCCccchH---HHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 336 GQSIVDCCAAPGGK---TLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 336 g~~VLDl~aG~G~k---t~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
+..|||+|||+|.. ++.+++......+|+|||.|+. ...+++..+.+|+.++|+++++|++++.. ++++|+|++
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~~dkVtVI~gd~eev~L--PEKVDIIVS 434 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEWGSQVTVVSSDMREWVA--PEKADIIVS 434 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTTGGGEEEEESCTTTCCC--SSCEEEEEC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccCCCeEEEEeCcceeccC--CcccCEEEE
Confidence 34799999999998 5555555332337999999984 56778889999999999999999998753 479999998
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCC
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSID 469 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~ 469 (528)
..--+ ..+. +.. .+.|...-++|||||+++=+.|+++
T Consensus 435 EwMG~--fLl~-----------E~m-------levL~Ardr~LKPgGimiPs~atly 471 (637)
T 4gqb_A 435 ELLGS--FADN-----------ELS-------PECLDGAQHFLKDDGVSIPGEYTSF 471 (637)
T ss_dssp CCCBT--TBGG-----------GCH-------HHHHHHHGGGEEEEEEEESCEEEEE
T ss_pred EcCcc--cccc-----------cCC-------HHHHHHHHHhcCCCcEEccccceEE
Confidence 64432 2211 111 1357788899999999985555533
No 289
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.33 E-value=5.4e-07 Score=98.75 Aligned_cols=111 Identities=15% Similarity=0.136 Sum_probs=79.4
Q ss_pred CCeEEEeCCccchHHHHH---HHHcC---------CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc-
Q 009708 336 GQSIVDCCAAPGGKTLYM---ASCLS---------GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN- 402 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~l---a~~~~---------~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~- 402 (528)
+..|||+|||+|..+..+ ++..+ ...+|+|||.++..+..++.... +|+.++|+++++|++++...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 347999999999997433 22111 23499999999988877766654 89988899999999987531
Q ss_pred ---CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 403 ---STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 403 ---~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
..+++|+|++...-+ .|. + ++..+.|..+-++|||||+++=+.|+
T Consensus 489 ~~~~~ekVDIIVSElmGs-fl~---n----------------EL~pe~Ld~v~r~Lkp~Gi~iP~~~t 536 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGS-FGD---N----------------ELSPECLDGVTGFLKPTTISIPQKYT 536 (745)
T ss_dssp HHTTCCCCSEEEECCCBT-TBG---G----------------GSHHHHHHTTGGGSCTTCEEESCEEE
T ss_pred ccCCCCcccEEEEecccc-ccc---h----------------hccHHHHHHHHHhCCCCcEEECCccE
Confidence 147899999875532 111 0 12234578888999999999855555
No 290
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.32 E-value=1.2e-06 Score=90.56 Aligned_cols=102 Identities=16% Similarity=0.123 Sum_probs=75.2
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ .+ +++++.+|+.. . .+. ||+|++
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~------~~-~v~~~~~d~~~-~--~~~-~D~v~~ 273 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP------LS-GIEHVGGDMFA-S--VPQ-GDAMIL 273 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CT-TEEEEECCTTT-C--CCC-EEEEEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh------cC-CCEEEeCCccc-C--CCC-CCEEEE
Confidence 5567899999999999999999985 4578999999 888876653 23 38999999976 2 223 999997
Q ss_pred cCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 413 DAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 413 D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
.- ++..- ..... ..+|+++.+.|||||+|++....
T Consensus 274 ~~------~lh~~-------~d~~~-------~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 274 KA------VCHNW-------SDEKC-------IEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp ES------SGGGS-------CHHHH-------HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ec------ccccC-------CHHHH-------HHHHHHHHHhcCCCCEEEEEEec
Confidence 31 22211 11221 35699999999999999987544
No 291
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.26 E-value=2.2e-06 Score=87.82 Aligned_cols=103 Identities=20% Similarity=0.175 Sum_probs=75.6
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ..+ ++++.+|+.... + .||+|++.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~-v~~~~~d~~~~~---p-~~D~v~~~ 253 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSG------SNN-LTYVGGDMFTSI---P-NADAVLLK 253 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------BTT-EEEEECCTTTCC---C-CCSEEEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhccc------CCC-cEEEeccccCCC---C-CccEEEee
Confidence 4567999999999999999998753 579999999 998877654 233 899999997621 2 39999973
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcC---CCEEEEEcCCCC
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKP---GGVLVYSTCSID 469 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkp---GG~LvysTcs~~ 469 (528)
-. +.. +...+ ..++|+++.+.||| ||+|++......
T Consensus 254 ~~------lh~-------~~d~~-------~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 254 YI------LHN-------WTDKD-------CLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp SC------GGG-------SCHHH-------HHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred hh------hcc-------CCHHH-------HHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 21 211 11122 13569999999999 999998766543
No 292
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.22 E-value=4.5e-06 Score=85.73 Aligned_cols=134 Identities=14% Similarity=0.125 Sum_probs=90.0
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHc---CC----CccEEEEcCcccccccc---CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLH---QV----NSVIRTIHADLRTFADN---ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~---g~----~~~i~~~~~D~~~~~~~---~~ 404 (528)
+..+||=+|.|-|+....+.+. + ..+|+.||+++..++.+++.+... .. ..+++++.+|+..+... ..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 4579999999999999998875 3 479999999999999999865321 11 13588999999987642 24
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE-cCCCCchhhHHHHHHHHhh
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS-TCSIDPEENEERVEAFLLR 483 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys-Tcs~~~~Ene~~v~~~l~~ 483 (528)
++||+|++|.+-...+. .| ... ......+++++.+.+.|+|||++|.- .|...+ +.-..+...+++
T Consensus 283 ~~yDvIIvDl~D~~~s~---~p--------~g~-a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~-~~~~~i~~tl~~ 349 (381)
T 3c6k_A 283 REFDYVINDLTAVPIST---SP--------EED-STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLT-EALSLYEEQLGR 349 (381)
T ss_dssp CCEEEEEEECCSSCCCC---C-------------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCH-HHHHHHHHHHTT
T ss_pred CceeEEEECCCCCcccC---cc--------cCc-chHHHHHHHHHHHHHhcCCCCEEEEecCCCcch-hHHHHHHHHHHH
Confidence 68999999965321111 01 000 01124567899999999999999863 344443 322334444444
No 293
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.19 E-value=6.8e-07 Score=88.21 Aligned_cols=75 Identities=12% Similarity=0.112 Sum_probs=62.5
Q ss_pred CCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---CCCCCCEEEE
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---STVKCDKVLL 412 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---~~~~fD~Vl~ 412 (528)
+..+||+++|+|..++.+.+ ++.+++.||.++..++.+++|++. ..++++++.|+...... ...+||+||+
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfi 165 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFI 165 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEE
T ss_pred CCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEE
Confidence 55799999999999998876 357999999999999999999975 34589999998764432 2357999999
Q ss_pred cCCC
Q 009708 413 DAPC 416 (528)
Q Consensus 413 D~Pc 416 (528)
|||+
T Consensus 166 DPPY 169 (283)
T 2oo3_A 166 DPSY 169 (283)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9999
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.19 E-value=1.2e-05 Score=76.57 Aligned_cols=118 Identities=16% Similarity=0.131 Sum_probs=75.8
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcC-ccccccccCCCCCCEE
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKCDKV 410 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~-D~~~~~~~~~~~fD~V 410 (528)
.++++.+|||+||+||+++-.++.. .+..+|+|+|+-..-.+.= ..++.+|.. .|++..+ |+..+.+ .++|.|
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~-~g~~~V~avdvG~~ghe~P-~~~~s~gwn-~v~fk~gvDv~~~~~---~~~Dtl 148 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGL-KKVTEVRGYTKGGPGHEEP-VPMSTYGWN-IVKLMSGKDVFYLPP---EKCDTL 148 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCC-CCCCCTTTT-SEEEECSCCGGGCCC---CCCSEE
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHh-cCCCEEEEEecCCCCccCc-chhhhcCcC-ceEEEeccceeecCC---ccccEE
Confidence 4568889999999999999988876 4455899999965433100 011234555 4899999 9866554 569999
Q ss_pred EEc-CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHH
Q 009708 411 LLD-APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEER 476 (528)
Q Consensus 411 l~D-~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~ 476 (528)
+|| +|.|+ . | .+++.-. .+.|+-+.++|++ |.++ |.+...+..++
T Consensus 149 lcDIgeSs~--~----~---------~vE~~Rt--lrvLela~~wL~~-~~fc---~KVl~py~p~v 194 (267)
T 3p8z_A 149 LCDIGESSP--S----P---------TVEESRT--IRVLKMVEPWLKN-NQFC---IKVLNPYMPTV 194 (267)
T ss_dssp EECCCCCCS--C----H---------HHHHHHH--HHHHHHHGGGCSS-CEEE---EEESCCCSHHH
T ss_pred EEecCCCCC--C----h---------hhhhhHH--HHHHHHHHHhccc-CCEE---EEEccCCChhH
Confidence 999 44332 1 1 1111100 1268888999998 6666 44443333333
No 295
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.16 E-value=8.1e-06 Score=83.54 Aligned_cols=72 Identities=19% Similarity=0.174 Sum_probs=56.0
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEE
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLL 412 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~ 412 (528)
+.+|.+|||+||+|||+|..++++ +++|+|||+.+-. ..+. ..+ +|+++.+|+..+.+. ...||.|++
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~-----~~l~--~~~-~V~~~~~d~~~~~~~-~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMA-----QSLM--DTG-QVTWLREDGFKFRPT-RSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCCC-----HHHH--TTT-CEEEECSCTTTCCCC-SSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcC-----hhhc--cCC-CeEEEeCccccccCC-CCCcCEEEE
Confidence 568999999999999999999886 5799999986421 1111 223 489999999887653 357999999
Q ss_pred cCCC
Q 009708 413 DAPC 416 (528)
Q Consensus 413 D~Pc 416 (528)
|.-+
T Consensus 277 Dm~~ 280 (375)
T 4auk_A 277 DMVE 280 (375)
T ss_dssp CCSS
T ss_pred cCCC
Confidence 9777
No 296
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.13 E-value=6.4e-06 Score=84.51 Aligned_cols=102 Identities=18% Similarity=0.156 Sum_probs=74.7
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEc
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ .++ ++++.+|+.. . . + .||+|++.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~-v~~~~~d~~~-~-~-~-~~D~v~~~ 258 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG------NEN-LNFVGGDMFK-S-I-P-SADAVLLK 258 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC------CSS-EEEEECCTTT-C-C-C-CCSEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhccc------CCC-cEEEeCccCC-C-C-C-CceEEEEc
Confidence 456799999999999999999985 4578999999 788766543 244 8999999976 2 1 2 49999974
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcC---CCEEEEEcCCC
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKP---GGVLVYSTCSI 468 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkp---GG~LvysTcs~ 468 (528)
-.. .. +..... .++|+++.+.||| ||+|++.....
T Consensus 259 ~vl------h~-------~~d~~~-------~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 259 WVL------HD-------WNDEQS-------LKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp SCG------GG-------SCHHHH-------HHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred ccc------cC-------CCHHHH-------HHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 222 11 111221 3569999999999 99999876554
No 297
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.09 E-value=4.6e-05 Score=74.89 Aligned_cols=130 Identities=18% Similarity=0.150 Sum_probs=79.0
Q ss_pred CCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcC-ccccccccCCCCCCEE
Q 009708 332 DPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA-DLRTFADNSTVKCDKV 410 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~-D~~~~~~~~~~~fD~V 410 (528)
.+.++..|||+||+|||++..++.. .+...|+|+|+-..-.+.= ..++.++.. .|.+... |+..+.+ .++|.|
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~-~gv~~V~avdvG~~~he~P-~~~~ql~w~-lV~~~~~~Dv~~l~~---~~~D~i 164 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQ-KRVQEVRGYTKGGPGHEEP-QLVQSYGWN-IVTMKSGVDVFYRPS---ECCDTL 164 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTC-TTEEEEEEECCCSTTSCCC-CCCCBTTGG-GEEEECSCCTTSSCC---CCCSEE
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhh-cCCCEEEEEEcCCCCccCc-chhhhcCCc-ceEEEeccCHhhCCC---CCCCEE
Confidence 3567889999999999999988875 3445899999975521000 000122333 4778877 8877654 569999
Q ss_pred EEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCC-CEEEEEcCCCC-c--hhhHHHHHHHHhhCCC
Q 009708 411 LLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPG-GVLVYSTCSID-P--EENEERVEAFLLRHPE 486 (528)
Q Consensus 411 l~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpG-G~LvysTcs~~-~--~Ene~~v~~~l~~~~~ 486 (528)
+||.-- ++|. | .++..-. .+.|+-+-++|++| |.++ |.+. | ++-.+.++.+-.++.+
T Consensus 165 vcDige-Ss~~----~---------~ve~~Rt--l~vLel~~~wL~~~~~~f~---~KVl~pY~~~v~e~l~~lq~~fgg 225 (321)
T 3lkz_A 165 LCDIGE-SSSS----A---------EVEEHRT--IRVLEMVEDWLHRGPREFC---VKVLCPYMPKVIEKMELLQRRYGG 225 (321)
T ss_dssp EECCCC-CCSC----H---------HHHHHHH--HHHHHHHHHHHTTCCCEEE---EEESCTTSHHHHHHHHHHHHHHCC
T ss_pred EEECcc-CCCC----h---------hhhhhHH--HHHHHHHHHHhccCCCcEE---EEEcCCCChHHHHHHHHHHHHhCC
Confidence 999763 2232 1 1111111 12678888889888 8777 3433 2 3333444444444543
No 298
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.09 E-value=1.2e-06 Score=80.11 Aligned_cols=90 Identities=16% Similarity=0.210 Sum_probs=66.2
Q ss_pred cCCCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc--CCCCCC
Q 009708 331 VDPQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STVKCD 408 (528)
Q Consensus 331 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~--~~~~fD 408 (528)
+++.+|++|||+|||. +++|+|+.+++.++++... .++++++|+.+++.. ..++||
T Consensus 8 ~g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~~~~~~~fD 65 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQSAHKESSFD 65 (176)
T ss_dssp TTCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGGCCCSSCEE
T ss_pred cCCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCccccCCCCCEe
Confidence 3567899999999985 2389999999999887532 278899999887641 347899
Q ss_pred EEEEcCCCCCCccccCC-chhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 409 KVLLDAPCSGLGVLSKR-ADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 409 ~Vl~D~Pcsg~G~~~~~-pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+|++.-. +..- ++ ...+|+++.++|||||++++.
T Consensus 66 ~V~~~~~------l~~~~~~----------------~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 66 IILSGLV------PGSTTLH----------------SAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp EEEECCS------TTCCCCC----------------CHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCh------hhhcccC----------------HHHHHHHHHHHCCCCEEEEEE
Confidence 9997321 1111 11 134699999999999999974
No 299
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.02 E-value=5.9e-06 Score=80.99 Aligned_cols=119 Identities=16% Similarity=0.121 Sum_probs=76.0
Q ss_pred CCCCCCeEEEeCC------ccchHHHHHHHHcCCC-cEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCC
Q 009708 332 DPQPGQSIVDCCA------APGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNST 404 (528)
Q Consensus 332 ~~~~g~~VLDl~a------G~G~kt~~la~~~~~~-~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~ 404 (528)
.+.-|.+|||+|| +||+. .+.+. .+. +.|+++|+.+-.. ..+ .++++|+..... .
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS~--VLr~~-~p~g~~VVavDL~~~~s-----------da~--~~IqGD~~~~~~--~ 167 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGTA--VLRQW-LPTGTLLVDSDLNDFVS-----------DAD--STLIGDCATVHT--A 167 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHHH--HHHHH-SCTTCEEEEEESSCCBC-----------SSS--EEEESCGGGEEE--S
T ss_pred eecCCCEEEeCCCCCCCCCCCcHH--HHHHh-CCCCcEEEEeeCccccc-----------CCC--eEEEcccccccc--C
Confidence 3556899999996 99993 33343 454 5999999986431 122 348999876543 3
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHHHHHHh
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERVEAFLL 482 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v~~~l~ 482 (528)
.+||+||+|.....+|.... + ...+ ..+.++ .++-|.+.|+|||.++ |.++..+.++.+....+
T Consensus 168 ~k~DLVISDMAPNtTG~~D~--d--~~Rs-~~L~El------ALdfA~~~LkpGGsFv---VKVFQGsg~~~L~~lrk 231 (344)
T 3r24_A 168 NKWDLIISDMYDPRTKHVTK--E--NDSK-EGFFTY------LCGFIKQKLALGGSIA---VKITEHSWNADLYKLMG 231 (344)
T ss_dssp SCEEEEEECCCCTTSCSSCS--C--CCCC-CTHHHH------HHHHHHHHEEEEEEEE---EEECSSSCCHHHHHHHT
T ss_pred CCCCEEEecCCCCcCCcccc--c--hhHH-HHHHHH------HHHHHHHhCcCCCEEE---EEEecCCCHHHHHHHHh
Confidence 78999999966655565211 1 0001 122222 5788899999999999 55555554444544443
No 300
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.94 E-value=0.00011 Score=75.85 Aligned_cols=81 Identities=17% Similarity=0.337 Sum_probs=60.4
Q ss_pred CeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc-------CCCCCCE
Q 009708 337 QSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-------STVKCDK 409 (528)
Q Consensus 337 ~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~-------~~~~fD~ 409 (528)
-+|||+|||.||.++.+.+. +-..|.++|+++.+++..+.|.. + ..++++|+.++... ....+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~~-----~-~~~~~~DI~~~~~~~~~~~~~~~~~~D~ 74 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINFP-----R-SLHVQEDVSLLNAEIIKGFFKNDMPIDG 74 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHCT-----T-SEEECCCGGGCCHHHHHHHHCSCCCCCE
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhCC-----C-CceEecChhhcCHHHHHhhcccCCCeeE
Confidence 37999999999999988775 33457799999999999888742 2 46788999876431 1357999
Q ss_pred EEEcCCCCCCccccCC
Q 009708 410 VLLDAPCSGLGVLSKR 425 (528)
Q Consensus 410 Vl~D~Pcsg~G~~~~~ 425 (528)
|+.+|||.+.....+.
T Consensus 75 i~ggpPCQ~fS~ag~~ 90 (376)
T 3g7u_A 75 IIGGPPCQGFSSIGKG 90 (376)
T ss_dssp EEECCCCCTTC-----
T ss_pred EEecCCCCCcccccCC
Confidence 9999999887766543
No 301
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.82 E-value=5.2e-05 Score=76.98 Aligned_cols=80 Identities=21% Similarity=0.359 Sum_probs=63.0
Q ss_pred CCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAP 415 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~P 415 (528)
+-+|+|+|||.||.++.+.+. +-..|+++|+++.+++..+.|.... .++|+.++....-..+|+|+.+||
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~--------~~~Di~~~~~~~~~~~D~l~~gpP 80 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEK--------PEGDITQVNEKTIPDHDILCAGFP 80 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCC--------CBSCGGGSCGGGSCCCSEEEEECC
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCC--------CcCCHHHcCHhhCCCCCEEEECCC
Confidence 458999999999999988764 3456889999999999999987421 168888775443346999999999
Q ss_pred CCCCccccCC
Q 009708 416 CSGLGVLSKR 425 (528)
Q Consensus 416 csg~G~~~~~ 425 (528)
|.+....++.
T Consensus 81 CQ~fS~ag~~ 90 (327)
T 2c7p_A 81 CQAFSISGKQ 90 (327)
T ss_dssp CTTTCTTSCC
T ss_pred CCCcchhccc
Confidence 9887766553
No 302
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.74 E-value=3.6e-05 Score=68.18 Aligned_cols=88 Identities=15% Similarity=0.181 Sum_probs=64.6
Q ss_pred CCCCeEEEeCCccc-hHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEE-E
Q 009708 334 QPGQSIVDCCAAPG-GKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKV-L 411 (528)
Q Consensus 334 ~~g~~VLDl~aG~G-~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~V-l 411 (528)
.++++|||+|||+| ..+..|++. .+..|+|+|+++..+. +++.|+++.....-..||+| .
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~--~g~~V~atDInp~Av~----------------~v~dDiF~P~~~~Y~~~DLIYs 95 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKH--SKVDLVLTDIKPSHGG----------------IVRDDITSPRMEIYRGAALIYS 95 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHH--SCCEEEEECSSCSSTT----------------EECCCSSSCCHHHHTTEEEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHh--CCCeEEEEECCccccc----------------eEEccCCCCcccccCCcCEEEE
Confidence 34679999999999 599999874 2467999999998875 78899987443222479999 8
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCC
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCS 467 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs 467 (528)
++||- ++|.-+++-|.+. |.-|++-+-+
T Consensus 96 irPP~-------------------------El~~~i~~lA~~v---~adliI~pL~ 123 (153)
T 2k4m_A 96 IRPPA-------------------------EIHSSLMRVADAV---GARLIIKPLT 123 (153)
T ss_dssp ESCCT-------------------------TTHHHHHHHHHHH---TCEEEEECBT
T ss_pred cCCCH-------------------------HHHHHHHHHHHHc---CCCEEEEcCC
Confidence 88887 3455667666665 5667755443
No 303
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.71 E-value=2.5e-05 Score=79.85 Aligned_cols=81 Identities=14% Similarity=0.244 Sum_probs=56.0
Q ss_pred CeEEEeCCccchHHHHHHHHcCC-CcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC-C-CCCCEEEEc
Q 009708 337 QSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-T-VKCDKVLLD 413 (528)
Q Consensus 337 ~~VLDl~aG~G~kt~~la~~~~~-~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~-~-~~fD~Vl~D 413 (528)
.+|||++||.||.++.+... +- ...|+++|+++.+++..+.|... ..++++|+.++.... . ..+|+|+.+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~~~~~~~~~D~l~~g 75 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITLEEFDRLSFDMILMS 75 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCHHHHHHHCCSEEEEC
T ss_pred CeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhccc------cccccCCHHHccHhHcCcCCcCEEEEc
Confidence 47999999999999988875 11 13699999999999999988632 246788988765321 1 269999999
Q ss_pred CCCCCCccccC
Q 009708 414 APCSGLGVLSK 424 (528)
Q Consensus 414 ~Pcsg~G~~~~ 424 (528)
|||.+....++
T Consensus 76 pPCq~fS~ag~ 86 (343)
T 1g55_A 76 PPCQPFTRIGR 86 (343)
T ss_dssp CC---------
T ss_pred CCCcchhhcCC
Confidence 99988776544
No 304
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.35 E-value=0.00046 Score=68.83 Aligned_cols=48 Identities=13% Similarity=0.111 Sum_probs=42.8
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcC
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQ 384 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g 384 (528)
.+|+.|||+|||+|..++.++.+ +.+++|+|+++.+++.++++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 67899999999999999887764 4689999999999999999998763
No 305
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.12 E-value=0.0009 Score=67.48 Aligned_cols=78 Identities=15% Similarity=0.322 Sum_probs=61.7
Q ss_pred eEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEEEEcCCCC
Q 009708 338 SIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKVLLDAPCS 417 (528)
Q Consensus 338 ~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~Vl~D~Pcs 417 (528)
+|||++||.||.++-+-+. +--.|.|+|+++.+++..+.|. ++ .++++|+.++....-..+|+|+.-|||.
T Consensus 2 kvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~-----~~--~~~~~DI~~i~~~~~~~~D~l~ggpPCQ 72 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNH-----SA--KLIKGDISKISSDEFPKCDGIIGGPPSQ 72 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHC-----CS--EEEESCGGGCCGGGSCCCSEEECCCCGG
T ss_pred eEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHC-----CC--CcccCChhhCCHhhCCcccEEEecCCCC
Confidence 6999999999999877653 2335789999999999988874 32 4678999987655445799999999998
Q ss_pred CCccccC
Q 009708 418 GLGVLSK 424 (528)
Q Consensus 418 g~G~~~~ 424 (528)
+....++
T Consensus 73 ~fS~ag~ 79 (331)
T 3ubt_Y 73 SWSEGGS 79 (331)
T ss_dssp GTEETTE
T ss_pred CcCCCCC
Confidence 8766554
No 306
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.03 E-value=0.0021 Score=65.05 Aligned_cols=80 Identities=18% Similarity=0.310 Sum_probs=59.1
Q ss_pred CeEEEeCCccchHHHHHHHHcCC-CcEE-EEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC--CCCCCEEEE
Q 009708 337 QSIVDCCAAPGGKTLYMASCLSG-QGLV-YAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--TVKCDKVLL 412 (528)
Q Consensus 337 ~~VLDl~aG~G~kt~~la~~~~~-~~~v-~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~--~~~fD~Vl~ 412 (528)
-+|+|+|||.||.++.+.+. +- ...| .|+|+++.+++..+.|.... ++++|+.++.... ...+|+|+.
T Consensus 11 ~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFKEE-------VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCCCC-------cccCChhhcCHHHhccCCCCEEEe
Confidence 47999999999999888763 21 1346 79999999999999886321 4677887764321 126999999
Q ss_pred cCCCCCC--ccccC
Q 009708 413 DAPCSGL--GVLSK 424 (528)
Q Consensus 413 D~Pcsg~--G~~~~ 424 (528)
.|||.+. ....+
T Consensus 83 gpPCQ~fs~S~ag~ 96 (327)
T 3qv2_A 83 SPPCQPYNNSIMSK 96 (327)
T ss_dssp CCCCTTCSHHHHTT
T ss_pred cCCccCcccccCCC
Confidence 9999987 44433
No 307
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.01 E-value=0.00076 Score=65.89 Aligned_cols=49 Identities=14% Similarity=0.240 Sum_probs=41.4
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCC
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQV 385 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~ 385 (528)
.+|+.|||.+||+|..+..+.++ +.+++++|+++..++.+++|++.+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 67999999999999988877764 46899999999999999999987664
No 308
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.01 E-value=0.0016 Score=64.88 Aligned_cols=82 Identities=12% Similarity=0.106 Sum_probs=60.9
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcE-EEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC---CCCCCEE
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGL-VYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS---TVKCDKV 410 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~-v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~---~~~fD~V 410 (528)
.+-+|+|++||.||.++.+.+. +-... |+++|+++.+++..+.|. ++ ..++++|+.++.... ...+|+|
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~-----~~-~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH-----QG-KIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT-----TT-CEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred CCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC-----CC-CceeCCChHHccHHHhcccCCcCEE
Confidence 3558999999999999887764 21122 699999999999888774 22 346788998765321 2469999
Q ss_pred EEcCCCCCCcccc
Q 009708 411 LLDAPCSGLGVLS 423 (528)
Q Consensus 411 l~D~Pcsg~G~~~ 423 (528)
+..|||.+....+
T Consensus 88 ~ggpPCQ~fS~ag 100 (295)
T 2qrv_A 88 IGGSPCNDLSIVN 100 (295)
T ss_dssp EECCCCGGGBTTC
T ss_pred EecCCCccccccC
Confidence 9999997766654
No 309
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.93 E-value=0.0014 Score=66.53 Aligned_cols=80 Identities=16% Similarity=0.266 Sum_probs=59.9
Q ss_pred eEEEeCCccchHHHHHHHHcCCC-cEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC--CCCCCEEEEcC
Q 009708 338 SIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--TVKCDKVLLDA 414 (528)
Q Consensus 338 ~VLDl~aG~G~kt~~la~~~~~~-~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~--~~~fD~Vl~D~ 414 (528)
+|+|+|||.||.++.+.+. +-. ..|.|+|+++.+++..+.|... ..++++|+.++.... ...+|+++..|
T Consensus 5 ~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQVIKKWNVDTILMSP 77 (333)
T ss_dssp EEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHHHHHTTCCEEEECC
T ss_pred EEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHHhccCCCCEEEecC
Confidence 7999999999999888764 211 3478999999999998887532 235678888765322 13699999999
Q ss_pred CCCCCccccC
Q 009708 415 PCSGLGVLSK 424 (528)
Q Consensus 415 Pcsg~G~~~~ 424 (528)
||.+.....+
T Consensus 78 PCQ~fS~ag~ 87 (333)
T 4h0n_A 78 PCQPFTRNGK 87 (333)
T ss_dssp CCCCSEETTE
T ss_pred CCcchhhhhh
Confidence 9988765543
No 310
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.77 E-value=0.002 Score=65.79 Aligned_cols=81 Identities=9% Similarity=0.089 Sum_probs=61.3
Q ss_pred ceeEeecch-HHHHHHhcCCCC------CCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCc
Q 009708 315 GLCAVQDES-AGLVVAVVDPQP------GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 387 (528)
Q Consensus 315 G~~~~Qd~~-s~l~~~~l~~~~------g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~ 387 (528)
|+-++.|+. ..-++..+++.+ ++.|||+|.|+|..|..|++... ..+|+++|+++..+..+++.. . .+
T Consensus 31 GQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~--~~- 105 (353)
T 1i4w_A 31 GFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E--GS- 105 (353)
T ss_dssp GCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T--TS-
T ss_pred CcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c--CC-
Confidence 443444444 455666666653 58999999999999999998632 358999999999999998876 2 23
Q ss_pred cEEEEcCcccccc
Q 009708 388 VIRTIHADLRTFA 400 (528)
Q Consensus 388 ~i~~~~~D~~~~~ 400 (528)
+++++++|+..+.
T Consensus 106 ~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 106 PLQILKRDPYDWS 118 (353)
T ss_dssp SCEEECSCTTCHH
T ss_pred CEEEEECCccchh
Confidence 5899999997764
No 311
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.70 E-value=0.013 Score=58.33 Aligned_cols=131 Identities=18% Similarity=0.131 Sum_probs=81.7
Q ss_pred CeEEEeCCccchHHHHHH---HHcCCCc--EEEEEcCChH--------HHH-HHHHHHHHc----CCCccEEEEcCcccc
Q 009708 337 QSIVDCCAAPGGKTLYMA---SCLSGQG--LVYAIDINKG--------RLR-ILNETAKLH----QVNSVIRTIHADLRT 398 (528)
Q Consensus 337 ~~VLDl~aG~G~kt~~la---~~~~~~~--~v~avD~s~~--------~l~-~~~~n~~~~----g~~~~i~~~~~D~~~ 398 (528)
-+|||+|-|+|...+... ...++.. +.+++|..+- .+. ..+...... +-.-.++++.+|+..
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~ 177 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARK 177 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHH
Confidence 479999999998664333 2224444 4577776321 111 222222222 111125678899987
Q ss_pred ccccC-CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchhhHHHH
Q 009708 399 FADNS-TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEENEERV 477 (528)
Q Consensus 399 ~~~~~-~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~Ene~~v 477 (528)
..+.. ..+||+|++|+=. -.++|++ |. .++++.++++++|||+|+--||+ ..|
T Consensus 178 ~l~~l~~~~~Da~flDgFs-----P~kNPeL-Ws-------------~e~f~~l~~~~~pgg~laTYtaa-------g~V 231 (308)
T 3vyw_A 178 RIKEVENFKADAVFHDAFS-----PYKNPEL-WT-------------LDFLSLIKERIDEKGYWVSYSSS-------LSV 231 (308)
T ss_dssp HGGGCCSCCEEEEEECCSC-----TTTSGGG-GS-------------HHHHHHHHTTEEEEEEEEESCCC-------HHH
T ss_pred HHhhhcccceeEEEeCCCC-----cccCccc-CC-------------HHHHHHHHHHhCCCcEEEEEeCc-------HHH
Confidence 65543 3479999999622 3467874 43 45789999999999999865554 356
Q ss_pred HHHHhhCCCceEecCCC
Q 009708 478 EAFLLRHPEFSIDPADG 494 (528)
Q Consensus 478 ~~~l~~~~~~~~~~~~~ 494 (528)
..-|... +|++..+++
T Consensus 232 RR~L~~a-GF~V~k~~G 247 (308)
T 3vyw_A 232 RKSLLTL-GFKVGSSRE 247 (308)
T ss_dssp HHHHHHT-TCEEEEEEC
T ss_pred HHHHHHC-CCEEEecCC
Confidence 7777764 687776654
No 312
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.65 E-value=0.0019 Score=68.71 Aligned_cols=84 Identities=19% Similarity=0.265 Sum_probs=57.9
Q ss_pred CCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc-------------
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN------------- 402 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~------------- 402 (528)
.-+|+|+|||.||.++-+.+. +-..|.++|+++.+++..+.|.... ++ ..++++|+.++...
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~~--p~-~~~~~~DI~~i~~~~~~~~~~~~~~~~ 162 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYCD--PA-THHFNEDIRDITLSHQEGVSDEAAAEH 162 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCCC--TT-TCEEESCTHHHHCTTCTTSCHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhcccC--CC-cceeccchhhhhhccccccchhhHHhh
Confidence 347999999999999887653 2234899999999999888775221 11 34567888776421
Q ss_pred ---CCCCCCEEEEcCCCCCCccccC
Q 009708 403 ---STVKCDKVLLDAPCSGLGVLSK 424 (528)
Q Consensus 403 ---~~~~fD~Vl~D~Pcsg~G~~~~ 424 (528)
....+|+|+..|||.+....++
T Consensus 163 i~~~~~~~Dvl~gGpPCQ~FS~AG~ 187 (482)
T 3me5_A 163 IRQHIPEHDVLLAGFPCQPFSLAGV 187 (482)
T ss_dssp HHHHSCCCSEEEEECCCCCC-----
T ss_pred hhhcCCCCCEEEecCCCcchhhhCc
Confidence 1246899999999988766543
No 313
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.56 E-value=0.0041 Score=62.81 Aligned_cols=102 Identities=20% Similarity=0.258 Sum_probs=67.3
Q ss_pred HhcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCC
Q 009708 329 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 407 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~f 407 (528)
....+++|++||-.|||+ |..++++|+.++ .+|+++|.++++++.++ .+|.+..+.....|.........+.+
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~~i~~~~~~~~~~~~~~~g~~ 233 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLAR----RLGAEVAVNARDTDPAAWLQKEIGGA 233 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCSEEEETTTSCHHHHHHHHHSSE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----HcCCCEEEeCCCcCHHHHHHHhCCCC
Confidence 345678999999999876 778888888753 59999999999988764 46766422111112211111112368
Q ss_pred CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 408 DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 408 D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
|.|+.. +|.+ ..+..+++.|++||+++..
T Consensus 234 d~vid~---~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 234 HGVLVT---AVSP-------------------------KAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp EEEEES---SCCH-------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred CEEEEe---CCCH-------------------------HHHHHHHHHhccCCEEEEe
Confidence 988763 2211 1377888999999999864
No 314
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.54 E-value=0.0069 Score=63.14 Aligned_cols=67 Identities=16% Similarity=0.166 Sum_probs=53.3
Q ss_pred cCCCCCCeEEEeCCccchHHHHHH-HHcCCCcEEEEEcCChHHHHHHHHHHHH--c-CCCccEEEEcCccc
Q 009708 331 VDPQPGQSIVDCCAAPGGKTLYMA-SCLSGQGLVYAIDINKGRLRILNETAKL--H-QVNSVIRTIHADLR 397 (528)
Q Consensus 331 l~~~~g~~VLDl~aG~G~kt~~la-~~~~~~~~v~avD~s~~~l~~~~~n~~~--~-g~~~~i~~~~~D~~ 397 (528)
+.+.+++.|+|+||+.|..++.++ ...++.++|+|+|.+|..++.+++|++. + +.+.++++++.-+.
T Consensus 222 ~~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 222 LRFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred cccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 345789999999999999999988 4433348999999999999999999998 3 45134777765443
No 315
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.48 E-value=0.0098 Score=57.90 Aligned_cols=125 Identities=14% Similarity=0.123 Sum_probs=83.4
Q ss_pred CCCeEEEeCCccchHHHHHHHHc------CCCcEEEEEcC-----Ch----------------------HHHHH---HHH
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCL------SGQGLVYAIDI-----NK----------------------GRLRI---LNE 378 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~------~~~~~v~avD~-----s~----------------------~~l~~---~~~ 378 (528)
|| .|+++|+..|+.+..++... +...+|+++|. .+ +.++. ..+
T Consensus 70 pG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 70 PG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp CS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 45 89999999999988877532 23578999992 21 11221 122
Q ss_pred HHHHcCC-CccEEEEcCcccccccc-----CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHh
Q 009708 379 TAKLHQV-NSVIRTIHADLRTFADN-----STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAAS 452 (528)
Q Consensus 379 n~~~~g~-~~~i~~~~~D~~~~~~~-----~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~ 452 (528)
|.+++|. .++|+++.+++.+..+. ...+||.|++|.-. ..-....++.++
T Consensus 149 ~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~------------------------Y~~t~~~le~~~ 204 (257)
T 3tos_A 149 CSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL------------------------YEPTKAVLEAIR 204 (257)
T ss_dssp TTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC------------------------HHHHHHHHHHHG
T ss_pred hhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc------------------------cchHHHHHHHHH
Confidence 3335666 36799999999875443 23479999999643 011234578889
Q ss_pred ccCcCCCEEEEEcCCC--CchhhHHHHHHHHhhCC
Q 009708 453 LLVKPGGVLVYSTCSI--DPEENEERVEAFLLRHP 485 (528)
Q Consensus 453 ~~LkpGG~LvysTcs~--~~~Ene~~v~~~l~~~~ 485 (528)
..|+|||+||+-.+.. .+.+ .+.+.+|+..+.
T Consensus 205 p~l~~GGvIv~DD~~~~~w~G~-~~A~~ef~~~~~ 238 (257)
T 3tos_A 205 PYLTKGSIVAFDELDNPKWPGE-NIAMRKVLGLDH 238 (257)
T ss_dssp GGEEEEEEEEESSTTCTTCTHH-HHHHHHHTCTTS
T ss_pred HHhCCCcEEEEcCCCCCCChHH-HHHHHHHHhhCC
Confidence 9999999999888642 3433 356678887763
No 316
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.43 E-value=0.0012 Score=73.55 Aligned_cols=128 Identities=16% Similarity=0.200 Sum_probs=82.8
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-----------CCcEEEEEcCChHHHHHHHHHH--------------HHc-----C-
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-----------GQGLVYAIDINKGRLRILNETA--------------KLH-----Q- 384 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-----------~~~~v~avD~s~~~l~~~~~n~--------------~~~-----g- 384 (528)
.-+|+|+|.|+|...+.+.+... ...+++++|..|-..+.+++.+ +.. |
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 45899999999998887766431 1257999999665554444322 211 1
Q ss_pred ----CC---ccEEEEcCccccccccC----CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhc
Q 009708 385 ----VN---SVIRTIHADLRTFADNS----TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASL 453 (528)
Q Consensus 385 ----~~---~~i~~~~~D~~~~~~~~----~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~ 453 (528)
++ -.++++.+|+.+..+.. ...||.+++|+-. -.++|++ |. .+++....+
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~-----p~~np~~-w~-------------~~~~~~l~~ 199 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFA-----PAKNPDM-WN-------------EQLFNAMAR 199 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSC-----C--CCTT-CS-------------HHHHHHHHH
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCC-----CCCChhh-hh-------------HHHHHHHHH
Confidence 11 14678889998766543 3679999999865 3467763 42 346777888
Q ss_pred cCcCCCEEEEEcCCCCchhhHHHHHHHHhhCCCceEe
Q 009708 454 LVKPGGVLVYSTCSIDPEENEERVEAFLLRHPEFSID 490 (528)
Q Consensus 454 ~LkpGG~LvysTcs~~~~Ene~~v~~~l~~~~~~~~~ 490 (528)
++++||++...+|. ..|...|.+. +|.+.
T Consensus 200 ~~~~g~~~~t~~~~-------~~vr~~l~~a-Gf~~~ 228 (689)
T 3pvc_A 200 MTRPGGTFSTFTAA-------GFVRRGLQQA-GFNVT 228 (689)
T ss_dssp HEEEEEEEEESCCC-------HHHHHHHHHT-TCEEE
T ss_pred HhCCCCEEEeccCc-------HHHHHHHHhC-CeEEE
Confidence 99999998866665 2455555543 35443
No 317
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.37 E-value=0.015 Score=59.14 Aligned_cols=103 Identities=20% Similarity=0.302 Sum_probs=65.8
Q ss_pred HhcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEE---cCccc-cccccC
Q 009708 329 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTI---HADLR-TFADNS 403 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~---~~D~~-~~~~~~ 403 (528)
...++++|++||-.|||+ |..++++|+.++ ..+|+++|.++.+++.++ .+|.+..+... ..|.. .+....
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLSKAK----EIGADLVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCSEEEECSSCCHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HhCCCEEEcCcccccchHHHHHHHHh
Confidence 345788999999999876 667777777643 348999999999987764 46776322111 01111 111111
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
...||+||- |+|.. ..+..++++|++||+++..
T Consensus 240 ~~g~D~vid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 240 GCKPEVTIE---CTGAE-------------------------ASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp TSCCSEEEE---CSCCH-------------------------HHHHHHHHHSCTTCEEEEC
T ss_pred CCCCCEEEE---CCCCh-------------------------HHHHHHHHHhcCCCEEEEE
Confidence 246999875 33211 1367788999999999864
No 318
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.23 E-value=0.0076 Score=61.78 Aligned_cols=103 Identities=17% Similarity=0.202 Sum_probs=67.5
Q ss_pred HhcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc----cC
Q 009708 329 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD----NS 403 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~----~~ 403 (528)
....+++|++||=.|+|+ |..++++|+.++ ..+|+++|.++.+++.+++ +|.+..+.....|...... ..
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAEE----VGATATVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCSEEECTTSSCHHHHHHSTTSSS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCCEEECCCCcCHHHHHHhhhhcc
Confidence 456788999999999876 666777777643 3489999999999877654 6776422111222222111 11
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
.+.||+||- |+|.+ ..+..++++|++||+++..
T Consensus 251 ~gg~Dvvid---~~G~~-------------------------~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 251 PGGVDVVIE---CAGVA-------------------------ETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp TTCEEEEEE---CSCCH-------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEE---CCCCH-------------------------HHHHHHHHHhccCCEEEEE
Confidence 247998874 44322 1377889999999998854
No 319
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.23 E-value=0.017 Score=59.30 Aligned_cols=129 Identities=15% Similarity=0.070 Sum_probs=69.7
Q ss_pred CCeEEEeCCccchHHHHHHHHc--------------CCCcEEEEEcCChHHHHHHHHHHHHcCC-----------CccEE
Q 009708 336 GQSIVDCCAAPGGKTLYMASCL--------------SGQGLVYAIDINKGRLRILNETAKLHQV-----------NSVIR 390 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~--------------~~~~~v~avD~s~~~l~~~~~n~~~~g~-----------~~~i~ 390 (528)
..+|+|+|||+|..|+.++..+ .+.-+|+..|+-..-...+=+.+....- ...--
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 4689999999999999875432 1345777777766655444333322100 00001
Q ss_pred EEcCcccccc--ccCCCCCCEEEEcCCCCCCccccCCchhh-------cc--------CCHHHHHH-----HHHHHHHHH
Q 009708 391 TIHADLRTFA--DNSTVKCDKVLLDAPCSGLGVLSKRADLR-------WN--------RRLEDMEE-----LKILQDELL 448 (528)
Q Consensus 391 ~~~~D~~~~~--~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~-------~~--------~~~~~~~~-----l~~~q~~lL 448 (528)
++.+....+- ..+.++||.|++. ...-.+.+.|+.. |+ .++. +.+ ..+....+|
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss---~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~-v~~ay~~Qf~~D~~~fL 208 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSA---FSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEK-TTTAYKRQFQADLAEFL 208 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEE---SCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHH-HHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEec---ceeeeeccCchhhhccccccccCCceEeCCCCHH-HHHHHHHHHHHHHHHHH
Confidence 2222211111 0124678998864 2222333333211 11 1233 322 333445679
Q ss_pred HHHhccCcCCCEEEEEcCCC
Q 009708 449 DAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 449 ~~a~~~LkpGG~LvysTcs~ 468 (528)
+.-.+.|+|||++|+++..-
T Consensus 209 ~~ra~eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 209 RARAAEVKRGGAMFLVCLGR 228 (374)
T ss_dssp HHHHHHEEEEEEEEEEEEEC
T ss_pred HHHHHHhCCCCEEEEEEecC
Confidence 99999999999999876643
No 320
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.15 E-value=0.041 Score=56.66 Aligned_cols=127 Identities=14% Similarity=-0.010 Sum_probs=72.2
Q ss_pred CCeEEEeCCccchHHHHHHHHc----------------CCCcEEEEEcCC-----------hHHHHHHHHHHHHcCCCcc
Q 009708 336 GQSIVDCCAAPGGKTLYMASCL----------------SGQGLVYAIDIN-----------KGRLRILNETAKLHQVNSV 388 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~----------------~~~~~v~avD~s-----------~~~l~~~~~n~~~~g~~~~ 388 (528)
.-+|+|+||++|..|+.+...+ .+.-+|+..|+- +...+.++ +..|-...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~---~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLE---KENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHH---HHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhh---hhccCCCC
Confidence 3589999999999999887751 134578899987 33333321 22332111
Q ss_pred EEEEcCccccccc--cCCCCCCEEEEcCCCCCCccccCCchh-------hccC--------CHHHH-----HHHHHHHHH
Q 009708 389 IRTIHADLRTFAD--NSTVKCDKVLLDAPCSGLGVLSKRADL-------RWNR--------RLEDM-----EELKILQDE 446 (528)
Q Consensus 389 i~~~~~D~~~~~~--~~~~~fD~Vl~D~Pcsg~G~~~~~pd~-------~~~~--------~~~~~-----~~l~~~q~~ 446 (528)
--++.+....+-. .+.++||.|++.. ..--+.+.|+. .|++ ++..+ .+..+.-..
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~---aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCY---CLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEES---CTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecc---eeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 2355554443321 1247899998742 22222333311 0111 12223 233444456
Q ss_pred HHHHHhccCcCCCEEEEEcCCC
Q 009708 447 LLDAASLLVKPGGVLVYSTCSI 468 (528)
Q Consensus 447 lL~~a~~~LkpGG~LvysTcs~ 468 (528)
+|+.-.+-|+|||++|..+...
T Consensus 207 FL~~Ra~eL~pGG~mvl~~~gr 228 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTFICK 228 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHhccCCeEEEEEecC
Confidence 7999999999999999877654
No 321
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.14 E-value=0.012 Score=60.07 Aligned_cols=102 Identities=20% Similarity=0.214 Sum_probs=66.1
Q ss_pred hcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc-ccccCCCCC
Q 009708 330 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADNSTVKC 407 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~-~~~~~~~~f 407 (528)
..++++|++||-.|||+ |..++++|+.++ ..+|+++|.++++++.++ .+|.+..+.....|..+ +.....+.|
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~vi~~~~~~~~~~~~~~~~gg~ 259 (371)
T 1f8f_A 185 ALKVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAK----QLGATHVINSKTQDPVAAIKEITDGGV 259 (371)
T ss_dssp TTCCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----HHTCSEEEETTTSCHHHHHHHHTTSCE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCCEEecCCccCHHHHHHHhcCCCC
Confidence 45678999999999876 667778887653 347999999999988775 45765322111112211 111112369
Q ss_pred CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 408 DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 408 D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
|+||- |+|. ...+..+++.|++||+++..
T Consensus 260 D~vid---~~g~-------------------------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 260 NFALE---STGS-------------------------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEEEE---CSCC-------------------------HHHHHHHHHTEEEEEEEEEC
T ss_pred cEEEE---CCCC-------------------------HHHHHHHHHHHhcCCEEEEe
Confidence 98874 3321 11377889999999998854
No 322
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.11 E-value=0.019 Score=58.05 Aligned_cols=93 Identities=13% Similarity=0.022 Sum_probs=65.1
Q ss_pred hcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCC
Q 009708 330 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCD 408 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD 408 (528)
...+++|++||-.|+|+ |..++++|+.++ .+|+++|.++++++.++ .+|.+. + + .|...+. ..+|
T Consensus 171 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~-v--~-~~~~~~~----~~~D 236 (348)
T 3two_A 171 FSKVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDAL----SMGVKH-F--Y-TDPKQCK----EELD 236 (348)
T ss_dssp HTTCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHH----HTTCSE-E--E-SSGGGCC----SCEE
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----hcCCCe-e--c-CCHHHHh----cCCC
Confidence 34788999999999876 667777887643 58999999999988764 478764 2 2 3332221 2699
Q ss_pred EEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 409 KVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 409 ~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+||- |.|... .+..+++.|++||+++..
T Consensus 237 ~vid---~~g~~~-------------------------~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 237 FIIS---TIPTHY-------------------------DLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EEEE---CCCSCC-------------------------CHHHHHTTEEEEEEEEEC
T ss_pred EEEE---CCCcHH-------------------------HHHHHHHHHhcCCEEEEE
Confidence 8874 333220 177789999999998854
No 323
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.02 E-value=0.0072 Score=61.35 Aligned_cols=103 Identities=19% Similarity=0.221 Sum_probs=65.7
Q ss_pred HhcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc-c-CCC
Q 009708 329 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-N-STV 405 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~-~-~~~ 405 (528)
....+++|++||=.|+|+ |..++++|+.+ +..+|+++|.++++++.++ .+|.+..+.....|..+... . ...
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~vi~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIAL----EYGATDIINYKNGDIVEQILKATDGK 234 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHH----HHTCCEEECGGGSCHHHHHHHHTTTC
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHH----HhCCceEEcCCCcCHHHHHHHHcCCC
Confidence 456788999999999876 66667777764 2347999999999987765 45765322111122221111 1 124
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
.||+|+- |+|.. ..+..++++|++||+++..
T Consensus 235 g~D~v~d---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 235 GVDKVVI---AGGDV-------------------------HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp CEEEEEE---CSSCT-------------------------THHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEE---CCCCh-------------------------HHHHHHHHHHhcCCEEEEe
Confidence 6998874 33321 1377788999999998843
No 324
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.98 E-value=0.0093 Score=61.70 Aligned_cols=116 Identities=18% Similarity=0.167 Sum_probs=67.0
Q ss_pred HhcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcc-cc-cccc-CC
Q 009708 329 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL-RT-FADN-ST 404 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~-~~-~~~~-~~ 404 (528)
...++++|++||-.|||+ |..++++|+.++ ..+|+++|.++++++.++ .+|.+ .+.....|. .+ +... ..
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~-~i~~~~~~~~~~~~~~~~~g 252 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLS----DAGFE-TIDLRNSAPLRDQIDQILGK 252 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----TTTCE-EEETTSSSCHHHHHHHHHSS
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCCc-EEcCCCcchHHHHHHHHhCC
Confidence 345788999999999877 777888888753 348999999999987764 45752 222111222 11 1111 12
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
..||+||- |+|.......++..+. .. ...+..++++|++||+++..
T Consensus 253 ~g~Dvvid---~~g~~~~~~~~~~~~~-~~----------~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 253 PEVDCGVD---AVGFEAHGLGDEANTE-TP----------NGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SCEEEEEE---CSCTTCBCSGGGTTSB-CT----------THHHHHHHHHEEEEEEEECC
T ss_pred CCCCEEEE---CCCCcccccccccccc-cc----------HHHHHHHHHHHhcCCEEEEe
Confidence 36998874 3331110000000000 00 01367788999999998843
No 325
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.93 E-value=0.0058 Score=60.78 Aligned_cols=77 Identities=22% Similarity=0.188 Sum_probs=47.5
Q ss_pred cEEEEcCccccccccC-CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 388 VIRTIHADLRTFADNS-TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 388 ~i~~~~~D~~~~~~~~-~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
.++++++|+.+..... .++||+|++|||+.........++.. ...............++..+.++|||||.|++...
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~--~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQL--GHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CC--HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhh--cccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 3689999999865432 46899999999995432211111100 00112222334456788999999999999886643
No 326
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.86 E-value=0.04 Score=55.77 Aligned_cols=102 Identities=15% Similarity=0.178 Sum_probs=64.9
Q ss_pred HhcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc-Ccccc-ccccC--
Q 009708 329 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH-ADLRT-FADNS-- 403 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~-~D~~~-~~~~~-- 403 (528)
...++++|++||-.|+|+ |..++++|+.+ +.+|+++|.++++++.++ .+|.+..+.... .|... +....
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~----~lGa~~~~~~~~~~~~~~~i~~~~~~ 235 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAK----NCGADVTLVVDPAKEEESSIIERIRS 235 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH----HTTCSEEEECCTTTSCHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHH----HhCCCEEEcCcccccHHHHHHHHhcc
Confidence 345788999999999865 55667777764 346999999999988765 467663221110 12211 11111
Q ss_pred --CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 404 --TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 404 --~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
...+|+||- |+|.. ..+..++++|++||+++..
T Consensus 236 ~~g~g~D~vid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 236 AIGDLPNVTID---CSGNE-------------------------KCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HSSSCCSEEEE---CSCCH-------------------------HHHHHHHHHSCTTCEEEEC
T ss_pred ccCCCCCEEEE---CCCCH-------------------------HHHHHHHHHHhcCCEEEEE
Confidence 246999875 32211 1367788999999999854
No 327
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=95.86 E-value=0.049 Score=56.50 Aligned_cols=88 Identities=9% Similarity=0.071 Sum_probs=59.0
Q ss_pred eEEEeCCccchHHHHHHHHcCCCcE----EEEEcCChHHHHHHHHHHHHcCCC--cc-----------------------
Q 009708 338 SIVDCCAAPGGKTLYMASCLSGQGL----VYAIDINKGRLRILNETAKLHQVN--SV----------------------- 388 (528)
Q Consensus 338 ~VLDl~aG~G~kt~~la~~~~~~~~----v~avD~s~~~l~~~~~n~~~~g~~--~~----------------------- 388 (528)
+|+|+|||.||.+..+-+.-.+-.- |.++|+++.++...+.|....... ..
T Consensus 12 rvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~~i~~ 91 (403)
T 4dkj_A 12 KVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEYGIKK 91 (403)
T ss_dssp EEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHHHHHH
T ss_pred eEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhcccccccccccccccc
Confidence 7999999999999887664100112 889999999999998887532100 00
Q ss_pred -----EE----------EEcCccccccccC-CCCCCEEEEcCCCCCCccccCC
Q 009708 389 -----IR----------TIHADLRTFADNS-TVKCDKVLLDAPCSGLGVLSKR 425 (528)
Q Consensus 389 -----i~----------~~~~D~~~~~~~~-~~~fD~Vl~D~Pcsg~G~~~~~ 425 (528)
+. ...+|++++.... ++.+|+++.-|||.+....++.
T Consensus 92 l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip~~vDll~ggpPCQ~fS~ag~~ 144 (403)
T 4dkj_A 92 INNTIKASYLNYAKKHFNNLFDIKKVNKDNFPKNIDIFTYSFPCQDLSVQGLQ 144 (403)
T ss_dssp HTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSCSSCSEEEECCCCTTTCTTSCC
T ss_pred ccHHHHHHHHhhcccCCCcccchhhcCHhhCCCCCcEEEEeCCCCCHHHhCCC
Confidence 00 0246777664432 4457999999999887665543
No 328
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.84 E-value=0.032 Score=57.10 Aligned_cols=97 Identities=13% Similarity=0.121 Sum_probs=62.8
Q ss_pred cCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCE
Q 009708 331 VDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 409 (528)
Q Consensus 331 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~ 409 (528)
+.+++|++||-.|+|+ |..++++|+.+ +.+|+++|.++++++.+++ +|.+. ++..+-.++.......+|+
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~~~~~~~~~~g~Dv 260 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKA----LGADE---VVNSRNADEMAAHLKSFDF 260 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCSE---EEETTCHHHHHTTTTCEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCcE---EeccccHHHHHHhhcCCCE
Confidence 4678999999999875 66677777764 3579999999999887754 57653 2221111111111246898
Q ss_pred EEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 410 VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 410 Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
||- |+|... .+..+++.|++||+++..
T Consensus 261 vid---~~g~~~-------------------------~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 261 ILN---TVAAPH-------------------------NLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEE---CCSSCC-------------------------CHHHHHTTEEEEEEEEEC
T ss_pred EEE---CCCCHH-------------------------HHHHHHHHhccCCEEEEe
Confidence 874 333210 156678889999988743
No 329
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.66 E-value=0.034 Score=56.88 Aligned_cols=103 Identities=17% Similarity=0.154 Sum_probs=65.1
Q ss_pred hcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc--Ccccccc-ccCCC
Q 009708 330 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH--ADLRTFA-DNSTV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~--~D~~~~~-~~~~~ 405 (528)
..++++|++||-.|+|+ |..++++|+.++ ..+|+++|.++++++.++ .+|.+..+.... .|+.+.. ....+
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~vi~~~~~~~~~~~~v~~~~~~ 264 (376)
T 1e3i_A 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAK----ALGATDCLNPRELDKPVQDVITELTAG 264 (376)
T ss_dssp TSCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCSEEECGGGCSSCHHHHHHHHHTS
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCcEEEccccccchHHHHHHHHhCC
Confidence 45678999999999865 556677777643 348999999999987764 467653111100 1111111 11123
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCC-CEEEEEc
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPG-GVLVYST 465 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpG-G~LvysT 465 (528)
.+|+||- |+|.. ..+..++++|++| |+++...
T Consensus 265 g~Dvvid---~~G~~-------------------------~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 265 GVDYSLD---CAGTA-------------------------QTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp CBSEEEE---SSCCH-------------------------HHHHHHHHTBCTTTCEEEECC
T ss_pred CccEEEE---CCCCH-------------------------HHHHHHHHHhhcCCCEEEEEC
Confidence 7998874 33311 1377889999999 9998543
No 330
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.65 E-value=0.033 Score=56.93 Aligned_cols=102 Identities=13% Similarity=0.106 Sum_probs=65.1
Q ss_pred hcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc--Ccccccc-ccCCC
Q 009708 330 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH--ADLRTFA-DNSTV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~--~D~~~~~-~~~~~ 405 (528)
...+++|++||-.|||+ |..++++|+.++ ..+|+++|.++++++.++ .+|.+..+.... .|..+.. ....+
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~vi~~~~~~~~~~~~i~~~t~g 260 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAI----ELGATECLNPKDYDKPIYEVICEKTNG 260 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HTTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCcEEEecccccchHHHHHHHHhCC
Confidence 45678999999999865 556677777653 348999999999988764 467753211100 1121111 11123
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCC-CEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPG-GVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpG-G~Lvys 464 (528)
.+|+||- |+|.. ..+..++++|++| |+++..
T Consensus 261 g~Dvvid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 261 GVDYAVE---CAGRI-------------------------ETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp CBSEEEE---CSCCH-------------------------HHHHHHHHTBCTTTCEEEEC
T ss_pred CCCEEEE---CCCCH-------------------------HHHHHHHHHHhcCCCEEEEE
Confidence 7998874 33311 1377889999999 998854
No 331
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.64 E-value=0.02 Score=59.10 Aligned_cols=110 Identities=17% Similarity=0.186 Sum_probs=66.1
Q ss_pred hcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCc-ccc-cccc-CCC
Q 009708 330 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHAD-LRT-FADN-STV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D-~~~-~~~~-~~~ 405 (528)
...+++|++||-.|||+ |..++++|+.++ ..+|+++|.++++++.++ .+|.+ .+.....| ..+ +... ...
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~----~lGa~-~i~~~~~~~~~~~v~~~t~g~ 253 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAK----AQGFE-IADLSLDTPLHEQIAALLGEP 253 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCE-EEETTSSSCHHHHHHHHHSSS
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHH----HcCCc-EEccCCcchHHHHHHHHhCCC
Confidence 35678999999999876 667778887753 348999999999998775 46763 22211111 111 1111 124
Q ss_pred CCCEEEEcCCCCCCcccc------CCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLS------KRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~------~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
.+|+||- |+|..... .+++ + ...+..++++|++||+++..
T Consensus 254 g~Dvvid---~~G~~~~~~~~~~~~~~~------~----------~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 254 EVDCAVD---AVGFEARGHGHEGAKHEA------P----------ATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp CEEEEEE---CCCTTCBCSSTTGGGSBC------T----------THHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEE---CCCCcccccccccccccc------h----------HHHHHHHHHHHhcCCEEEEe
Confidence 6998874 33321100 0110 0 11367788999999998854
No 332
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.62 E-value=0.024 Score=58.03 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=66.3
Q ss_pred HhcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEE--cCcccccc-ccCC
Q 009708 329 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTI--HADLRTFA-DNST 404 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~--~~D~~~~~-~~~~ 404 (528)
....+++|++||=.|||+ |..++++|+.++ ..+|+++|.++++++.++ .+|.+..+... ..|..+.. ....
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~vi~~~~~~~~~~~~i~~~~~ 261 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAK----KFGVNEFVNPKDHDKPIQEVIVDLTD 261 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHH----TTTCCEEECGGGCSSCHHHHHHHHTT
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCcEEEccccCchhHHHHHHHhcC
Confidence 345678999999999865 666777777653 348999999999988664 56776421111 11111111 1112
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCC-CEEEEE
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPG-GVLVYS 464 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpG-G~Lvys 464 (528)
+.+|+||- |+|.. ..+..++++|++| |+++..
T Consensus 262 gg~D~vid---~~g~~-------------------------~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 262 GGVDYSFE---CIGNV-------------------------SVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp SCBSEEEE---CSCCH-------------------------HHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEE---CCCCH-------------------------HHHHHHHHHhhccCCEEEEE
Confidence 47999874 43311 2378889999997 998854
No 333
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.52 E-value=0.052 Score=55.39 Aligned_cols=102 Identities=15% Similarity=0.172 Sum_probs=64.6
Q ss_pred hcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc--Ccccccc-ccCCC
Q 009708 330 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH--ADLRTFA-DNSTV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~--~D~~~~~-~~~~~ 405 (528)
..++++|++||-.|+|+ |..++++|+.++ ..+|+++|.++.+++.++ .+|.+..+.... .|..+.. ....+
T Consensus 187 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~vi~~~~~~~~~~~~~~~~~~~ 261 (374)
T 1cdo_A 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAK----VFGATDFVNPNDHSEPISQVLSKMTNG 261 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCCEEECGGGCSSCHHHHHHHHHTS
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HhCCceEEeccccchhHHHHHHHHhCC
Confidence 35678999999999765 556677777642 338999999999988764 467653111100 1111111 11123
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCC-CEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPG-GVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpG-G~Lvys 464 (528)
.+|+||- |+|.+ ..+..++++|++| |++|..
T Consensus 262 g~D~vid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 262 GVDFSLE---CVGNV-------------------------GVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp CBSEEEE---CSCCH-------------------------HHHHHHHHTBCTTTCEEEEC
T ss_pred CCCEEEE---CCCCH-------------------------HHHHHHHHHhhcCCcEEEEE
Confidence 7998874 33311 1377889999999 998854
No 334
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=95.49 E-value=0.01 Score=60.56 Aligned_cols=128 Identities=13% Similarity=0.080 Sum_probs=74.3
Q ss_pred CeEEEeCCccchHHHHHHHH---------------cCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc
Q 009708 337 QSIVDCCAAPGGKTLYMASC---------------LSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD 401 (528)
Q Consensus 337 ~~VLDl~aG~G~kt~~la~~---------------~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~ 401 (528)
-+|+|+||++|..|+.+... -.+.-+|+.+|+-..-...+-+++....-...--++.+....+-.
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~ 132 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYG 132 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhh
Confidence 47999999999998765543 123467999999888887776655431100012344444333211
Q ss_pred --cCCCCCCEEEEcCCCCCCccccCCchhh-------c-c-CCH-----HHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 402 --NSTVKCDKVLLDAPCSGLGVLSKRADLR-------W-N-RRL-----EDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 402 --~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~-------~-~-~~~-----~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
.+..++|.|++... .--+.+.|+.. | . .++ .-..+..+.-..+|+.-.+-|+|||++|..+
T Consensus 133 rlfp~~S~d~v~Ss~a---LHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 133 RLFPRNTLHFIHSSYS---LMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp CCSCTTCBSCEEEESC---TTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred ccCCCCceEEEEehhh---hhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 12468999986521 11122222110 0 0 001 1123445555667999999999999999776
Q ss_pred CC
Q 009708 466 CS 467 (528)
Q Consensus 466 cs 467 (528)
..
T Consensus 210 ~g 211 (359)
T 1m6e_X 210 LG 211 (359)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 335
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.48 E-value=0.021 Score=58.25 Aligned_cols=99 Identities=15% Similarity=0.040 Sum_probs=64.6
Q ss_pred hcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc-Cccccccc--cCCC
Q 009708 330 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH-ADLRTFAD--NSTV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~-~D~~~~~~--~~~~ 405 (528)
...+++|++||-.|+|+ |..++++|+.+ +.+|+++|.++.+++.++ .+|.+..+. .. .|..+... ....
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~----~lGa~~vi~-~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAF----ALGADHGIN-RLEEDWVERVYALTGDR 256 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH----HHTCSEEEE-TTTSCHHHHHHHHHTTC
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHH----HcCCCEEEc-CCcccHHHHHHHHhCCC
Confidence 45678999999999776 66667777764 358999999999988764 467764222 11 12111111 1124
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
.+|+|+- |+|... +..+++.|++||+++..
T Consensus 257 g~D~vid---~~g~~~--------------------------~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 257 GADHILE---IAGGAG--------------------------LGQSLKAVAPDGRISVI 286 (363)
T ss_dssp CEEEEEE---ETTSSC--------------------------HHHHHHHEEEEEEEEEE
T ss_pred CceEEEE---CCChHH--------------------------HHHHHHHhhcCCEEEEE
Confidence 6998875 333111 67788899999998854
No 336
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.47 E-value=0.05 Score=54.74 Aligned_cols=104 Identities=15% Similarity=0.150 Sum_probs=66.1
Q ss_pred HHhcCCCCCCeEEEeCCccch-HHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc--CC
Q 009708 328 VAVVDPQPGQSIVDCCAAPGG-KTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--ST 404 (528)
Q Consensus 328 ~~~l~~~~g~~VLDl~aG~G~-kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~--~~ 404 (528)
......++|++||=.|||+.| .++++|+.+ +...++++|.++++++.++ .+|.+..+.....|..+.... ..
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~-G~~~vi~~~~~~~k~~~a~----~lGa~~~i~~~~~~~~~~~~~~~~~ 227 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVAL-GAKSVTAIDISSEKLALAK----SFGAMQTFNSSEMSAPQMQSVLREL 227 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHH----HTTCSEEEETTTSCHHHHHHHHGGG
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHc-CCcEEEEEechHHHHHHHH----HcCCeEEEeCCCCCHHHHHHhhccc
Confidence 344567899999999987754 556667664 3457899999999987664 578764222222222221111 12
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
..+|.|+- |+|.+ ..++.+++++++||+++..
T Consensus 228 ~g~d~v~d---~~G~~-------------------------~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 228 RFNQLILE---TAGVP-------------------------QTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp CSSEEEEE---CSCSH-------------------------HHHHHHHHHCCTTCEEEEC
T ss_pred CCcccccc---ccccc-------------------------chhhhhhheecCCeEEEEE
Confidence 45777764 33321 1377788999999998854
No 337
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.39 E-value=0.023 Score=57.31 Aligned_cols=99 Identities=17% Similarity=0.186 Sum_probs=65.9
Q ss_pred CCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc--CCCCCC
Q 009708 332 DPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STVKCD 408 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~--~~~~fD 408 (528)
.+++|++||-.|+|+ |..++++|+.++ ..+|+++|.++++++.++ .+|.+..+. ...|..+.... ....+|
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~----~lGa~~~i~-~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALAR----EVGADAAVK-SGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHH----HTTCSEEEE-CSTTHHHHHHHHHGGGCEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCCCEEEc-CCCcHHHHHHHHhCCCCCe
Confidence 578899999999876 667778887653 469999999999998764 468764221 11122111111 123699
Q ss_pred EEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 409 KVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 409 ~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+||- |+|.. ..+..+++.|++||+++..
T Consensus 242 ~v~d---~~G~~-------------------------~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 242 AVFD---FVGAQ-------------------------STIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp EEEE---SSCCH-------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred EEEE---CCCCH-------------------------HHHHHHHHHHhcCCEEEEE
Confidence 8874 43311 1377889999999999854
No 338
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.32 E-value=0.06 Score=54.93 Aligned_cols=102 Identities=14% Similarity=0.100 Sum_probs=64.3
Q ss_pred hcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc--Ccccccc-ccCCC
Q 009708 330 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH--ADLRTFA-DNSTV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~--~D~~~~~-~~~~~ 405 (528)
..++++|++||-.|+|+ |..++++|+.++ ..+|+++|.++++++.++ .+|.+..+.... .|..+.. ....+
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~vi~~~~~~~~~~~~~~~~~~~ 260 (374)
T 2jhf_A 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAKAK----EVGATECVNPQDYKKPIQEVLTEMSNG 260 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCceEecccccchhHHHHHHHHhCC
Confidence 45678999999999765 556677777642 348999999999988764 467653111100 1111111 11123
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCC-CEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPG-GVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpG-G~Lvys 464 (528)
.+|+||- |+|.. ..+..++++|++| |+++..
T Consensus 261 g~D~vid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 261 GVDFSFE---VIGRL-------------------------DTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp CBSEEEE---CSCCH-------------------------HHHHHHHHHBCTTTCEEEEC
T ss_pred CCcEEEE---CCCCH-------------------------HHHHHHHHHhhcCCcEEEEe
Confidence 6998874 33211 1367788999999 998854
No 339
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.30 E-value=0.02 Score=58.25 Aligned_cols=96 Identities=13% Similarity=0.167 Sum_probs=61.3
Q ss_pred cCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccc-cccccCCCCCC
Q 009708 331 VDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLR-TFADNSTVKCD 408 (528)
Q Consensus 331 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~-~~~~~~~~~fD 408 (528)
.++++|++||-.|+|+ |..++++|+.++ .+|+++|.++.+++.+++ +|.+. ++..+-. ++.......+|
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~~----lGa~~---v~~~~~~~~~~~~~~~~~D 245 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAMK----MGADH---YIATLEEGDWGEKYFDTFD 245 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSE---EEEGGGTSCHHHHSCSCEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH----cCCCE---EEcCcCchHHHHHhhcCCC
Confidence 5688999999999864 556677777643 479999999999887654 57653 2221111 11111114699
Q ss_pred EEEEcCCCCCC--ccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEE
Q 009708 409 KVLLDAPCSGL--GVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVY 463 (528)
Q Consensus 409 ~Vl~D~Pcsg~--G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvy 463 (528)
+||- |+|. .. .+..++++|++||+++.
T Consensus 246 ~vid---~~g~~~~~-------------------------~~~~~~~~l~~~G~iv~ 274 (360)
T 1piw_A 246 LIVV---CASSLTDI-------------------------DFNIMPKAMKVGGRIVS 274 (360)
T ss_dssp EEEE---CCSCSTTC-------------------------CTTTGGGGEEEEEEEEE
T ss_pred EEEE---CCCCCcHH-------------------------HHHHHHHHhcCCCEEEE
Confidence 8875 3332 10 14557788899998874
No 340
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.29 E-value=0.061 Score=54.80 Aligned_cols=102 Identities=17% Similarity=0.188 Sum_probs=64.5
Q ss_pred hcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc--Ccccccc-ccCCC
Q 009708 330 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH--ADLRTFA-DNSTV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~--~D~~~~~-~~~~~ 405 (528)
..++++|++||-.|+|+ |..++++|+.++ ..+|+++|.++++++.++ .+|.+..+.... .|..+.. ....+
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~vi~~~~~~~~~~~~v~~~~~~ 259 (373)
T 2fzw_A 185 TAKLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAK----EFGATECINPQDFSKPIQEVLIEMTDG 259 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HHTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCceEeccccccccHHHHHHHHhCC
Confidence 45678999999999765 556677777653 348999999999988765 457653111100 1111111 11123
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCC-CEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPG-GVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpG-G~Lvys 464 (528)
.+|+||- |+|. ...+..++++|++| |+++..
T Consensus 260 g~D~vid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 260 GVDYSFE---CIGN-------------------------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp CBSEEEE---CSCC-------------------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCEEEE---CCCc-------------------------HHHHHHHHHhhccCCcEEEEE
Confidence 6998874 3331 11377889999999 998854
No 341
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.27 E-value=0.058 Score=54.29 Aligned_cols=102 Identities=21% Similarity=0.177 Sum_probs=64.9
Q ss_pred hcCCCCCCeEEEeCCccch-HHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc--CCCC
Q 009708 330 VVDPQPGQSIVDCCAAPGG-KTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STVK 406 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~G~-kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~--~~~~ 406 (528)
...+++|++||=.|+|+++ .+.++++.+. ..+|+++|.++++++.+ +.+|.+..+.....|..+.... ....
T Consensus 158 ~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~----~~~Ga~~~i~~~~~~~~~~v~~~t~g~g 232 (348)
T 4eez_A 158 VSGVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLA----KKIGADVTINSGDVNPVDEIKKITGGLG 232 (348)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHH----HHTTCSEEEEC-CCCHHHHHHHHTTSSC
T ss_pred ccCCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhh----hhcCCeEEEeCCCCCHHHHhhhhcCCCC
Confidence 3467899999999998755 5555565543 57999999999988665 4567764333323333221111 1235
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+|.++.+..- + ..+..+...|+++|+++..
T Consensus 233 ~d~~~~~~~~---~-------------------------~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 233 VQSAIVCAVA---R-------------------------IAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp EEEEEECCSC---H-------------------------HHHHHHHHTEEEEEEEEEC
T ss_pred ceEEEEeccC---c-------------------------chhheeheeecCCceEEEE
Confidence 7777764221 1 1367788999999998754
No 342
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.26 E-value=0.02 Score=57.77 Aligned_cols=97 Identities=9% Similarity=0.018 Sum_probs=62.5
Q ss_pred CCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcc-cccccc--CCCCC
Q 009708 332 DPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL-RTFADN--STVKC 407 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~-~~~~~~--~~~~f 407 (528)
++ +|++||-.|+|+ |..++++|+.+.++.+|+++|.++++++.+++ +|.+. ++..+- .+.... ....+
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGADY---VSEMKDAESLINKLTDGLGA 239 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCSE---EECHHHHHHHHHHHHTTCCE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCCE---EeccccchHHHHHhhcCCCc
Confidence 67 899999999865 56677777765113589999999999887654 57653 222111 111111 12369
Q ss_pred CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 408 DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 408 D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
|+||- |+|.. ..+..++++|++||+++..
T Consensus 240 D~vid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 240 SIAID---LVGTE-------------------------ETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEE---SSCCH-------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred cEEEE---CCCCh-------------------------HHHHHHHHHhhcCCEEEEe
Confidence 98875 33311 1367788899999998854
No 343
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.26 E-value=0.033 Score=56.81 Aligned_cols=96 Identities=15% Similarity=0.029 Sum_probs=61.8
Q ss_pred CCCeEEEeC-Ccc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccc-cccCCCCCCEEE
Q 009708 335 PGQSIVDCC-AAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF-ADNSTVKCDKVL 411 (528)
Q Consensus 335 ~g~~VLDl~-aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~-~~~~~~~fD~Vl 411 (528)
+|++||=.| +|+ |..++++|+.+. +.+|+++|.++++++.++ .+|.+..+. ...|.... .......+|+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~----~lGad~vi~-~~~~~~~~v~~~~~~g~Dvvi 244 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVK----SLGAHHVID-HSKPLAAEVAALGLGAPAFVF 244 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHH----HTTCSEEEC-TTSCHHHHHHTTCSCCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHH----HcCCCEEEe-CCCCHHHHHHHhcCCCceEEE
Confidence 788999887 443 667777777543 469999999999988765 467663211 11122111 111235799887
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
- |+|.. ..+..++++|++||+++..
T Consensus 245 d---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 245 S---TTHTD-------------------------KHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp E---CSCHH-------------------------HHHHHHHHHSCTTCEEEEC
T ss_pred E---CCCch-------------------------hhHHHHHHHhcCCCEEEEE
Confidence 4 44311 2377889999999999864
No 344
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=95.15 E-value=0.058 Score=62.08 Aligned_cols=79 Identities=13% Similarity=0.231 Sum_probs=57.4
Q ss_pred eEEEeCCccchHHHHHHHHcCCC-cEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc------------c-c-
Q 009708 338 SIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA------------D-N- 402 (528)
Q Consensus 338 ~VLDl~aG~G~kt~~la~~~~~~-~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~------------~-~- 402 (528)
+++||+||.||.++-+.+. +- -.+.|+|+++.+++..+.|. ++ ..++++|+..+. . .
T Consensus 542 ~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N~-----p~-~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 542 RTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLNN-----PG-STVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp EEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHHC-----TT-SEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred eEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CC-CccccccHHHHhhhccchhhhhhhhhhc
Confidence 7999999999999888664 22 25789999999999888774 22 346677764431 0 0
Q ss_pred -CCCCCCEEEEcCCCCCCccccC
Q 009708 403 -STVKCDKVLLDAPCSGLGVLSK 424 (528)
Q Consensus 403 -~~~~fD~Vl~D~Pcsg~G~~~~ 424 (528)
..+.+|+|+.-|||.+....++
T Consensus 614 p~~~~vDll~GGpPCQ~FS~ag~ 636 (1002)
T 3swr_A 614 PQKGDVEMLCGGPPCQGFSGMNR 636 (1002)
T ss_dssp CCTTTCSEEEECCCCTTCCSSSC
T ss_pred ccCCCeeEEEEcCCCcchhhhCC
Confidence 1246899999999988766554
No 345
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.10 E-value=0.02 Score=57.76 Aligned_cols=101 Identities=15% Similarity=0.070 Sum_probs=63.8
Q ss_pred HhcCCCCCCeEEEeCCc--cchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc-c-CC
Q 009708 329 AVVDPQPGQSIVDCCAA--PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-N-ST 404 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~aG--~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~-~-~~ 404 (528)
....+++|++||-.||| .|..++++++.+ +.+|+++|.++++++.+++ +|.+..+.....|...... . ..
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lga~~~~~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLR----LGAAYVIDTSTAPLYETVMELTNG 211 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCSEEEETTTSCHHHHHHHHTTT
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----CCCcEEEeCCcccHHHHHHHHhCC
Confidence 44678899999999986 567777887765 3589999999999887764 5665322111112211111 1 12
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
..+|+|+- |.|.. .+..+.+.|++||+++..
T Consensus 212 ~g~Dvvid---~~g~~--------------------------~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 212 IGADAAID---SIGGP--------------------------DGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp SCEEEEEE---SSCHH--------------------------HHHHHHHTEEEEEEEEEC
T ss_pred CCCcEEEE---CCCCh--------------------------hHHHHHHHhcCCCEEEEE
Confidence 46998875 43311 123345789999998854
No 346
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=95.09 E-value=0.052 Score=61.25 Aligned_cols=44 Identities=18% Similarity=0.218 Sum_probs=33.9
Q ss_pred CeEEEeCCccchHHHHHHHHcC--C--CcEEEEEcCChHHHHHHHHHH
Q 009708 337 QSIVDCCAAPGGKTLYMASCLS--G--QGLVYAIDINKGRLRILNETA 380 (528)
Q Consensus 337 ~~VLDl~aG~G~kt~~la~~~~--~--~~~v~avD~s~~~l~~~~~n~ 380 (528)
-+||||+||.||.++-+.+... + --.+.|+|+++.+++..+.|.
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 4799999999999987765310 0 025789999999999988874
No 347
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.07 E-value=0.075 Score=53.94 Aligned_cols=102 Identities=23% Similarity=0.307 Sum_probs=65.4
Q ss_pred HhcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc-----Ccccccc-c
Q 009708 329 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH-----ADLRTFA-D 401 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~-----~D~~~~~-~ 401 (528)
....+++|++||=.|+|+ |..++++|+.++ ...|+++|.++++++.+++. + +..+.... .|..+.. .
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~l----~-~~~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAG-ACPLVITDIDEGRLKFAKEI----C-PEVVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESCHHHHHHHHHH----C-TTCEEEECCSCCHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHh----c-hhcccccccccchHHHHHHHHH
Confidence 345788999999999866 666777777643 33499999999999988764 2 22232221 1111111 1
Q ss_pred c-CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 402 N-STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 402 ~-~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
. ....+|+||- |+|.. ..+..++++|++||+++..
T Consensus 247 ~t~g~g~Dvvid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 247 SFGGIEPAVALE---CTGVE-------------------------SSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp HTSSCCCSEEEE---CSCCH-------------------------HHHHHHHHHSCTTCEEEEC
T ss_pred HhCCCCCCEEEE---CCCCh-------------------------HHHHHHHHHhcCCCEEEEE
Confidence 1 1357998874 33311 1377889999999999864
No 348
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.03 E-value=0.08 Score=58.56 Aligned_cols=112 Identities=17% Similarity=0.271 Sum_probs=73.0
Q ss_pred CeEEEeCCccchHHHHHHHHcC-----------CCcEEEEEcC---ChHHHHHHH-----------HHHHHcCC------
Q 009708 337 QSIVDCCAAPGGKTLYMASCLS-----------GQGLVYAIDI---NKGRLRILN-----------ETAKLHQV------ 385 (528)
Q Consensus 337 ~~VLDl~aG~G~kt~~la~~~~-----------~~~~v~avD~---s~~~l~~~~-----------~n~~~~g~------ 385 (528)
-+|+|+|-|+|...+...+... ..-+++++|. +++-+..+- +..+....
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 4899999999998876665431 1246899999 555554221 22222211
Q ss_pred -------CccEEEEcCccccccccC----CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhcc
Q 009708 386 -------NSVIRTIHADLRTFADNS----TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLL 454 (528)
Q Consensus 386 -------~~~i~~~~~D~~~~~~~~----~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~ 454 (528)
.-.+++..+|+.+..... ...||+|++|+-. -.++|+ .|. .+++....++
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~-----p~~np~-~w~-------------~~~~~~l~~~ 208 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFA-----PAKNPD-MWT-------------QNLFNAMARL 208 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSC-----GGGCGG-GSC-------------HHHHHHHHHH
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCC-----CcCChh-hhh-------------HHHHHHHHHH
Confidence 012556778887755433 3679999999855 456777 343 3467888899
Q ss_pred CcCCCEEEEEcCC
Q 009708 455 VKPGGVLVYSTCS 467 (528)
Q Consensus 455 LkpGG~LvysTcs 467 (528)
++|||++...+|.
T Consensus 209 ~~~g~~~~t~~~~ 221 (676)
T 3ps9_A 209 ARPGGTLATFTSA 221 (676)
T ss_dssp EEEEEEEEESCCC
T ss_pred hCCCCEEEeccCc
Confidence 9999998755554
No 349
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.01 E-value=0.034 Score=57.00 Aligned_cols=103 Identities=20% Similarity=0.198 Sum_probs=63.6
Q ss_pred HhcC-CCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEE---cCcccc-cccc
Q 009708 329 AVVD-PQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTI---HADLRT-FADN 402 (528)
Q Consensus 329 ~~l~-~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~---~~D~~~-~~~~ 402 (528)
..++ +++|++||-.|+|+ |..++++|+.++ ..+|+++|.++++++.++ .+|.+..+... ..|..+ +...
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~vi~~~~~~~~~~~~~v~~~ 262 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAE----EIGADLTLNRRETSVEERRKAIMDI 262 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHH----HTTCSEEEETTTSCHHHHHHHHHHH
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHH----HcCCcEEEeccccCcchHHHHHHHH
Confidence 3456 78999999999664 555667776642 249999999999988765 46765322111 111111 1111
Q ss_pred C-CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 403 S-TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 403 ~-~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
. ...+|+||- |+|.. ..+..++++|++||+++..
T Consensus 263 ~~g~g~Dvvid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 263 THGRGADFILE---ATGDS-------------------------RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp TTTSCEEEEEE---CSSCT-------------------------THHHHHHHHEEEEEEEEEC
T ss_pred hCCCCCcEEEE---CCCCH-------------------------HHHHHHHHHHhcCCEEEEE
Confidence 1 236998874 33311 1267788899999998853
No 350
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.94 E-value=0.018 Score=57.88 Aligned_cols=63 Identities=8% Similarity=0.022 Sum_probs=50.4
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA 400 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~ 400 (528)
..+|+.|||.+||+|..+..+..+ +-+.+++|+++..++.+++++++.+.+ ...++.|+.++.
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~~--~~~~~~~~~~i~ 312 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERE---SRKWISFEMKPEYVAASAFRFLDNNIS--EEKITDIYNRIL 312 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHGGGSCSCSC--HHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHc---CCCEEEEeCCHHHHHHHHHHHHhcccc--hHHHHHHHHHHH
Confidence 467999999999999977666553 468999999999999999999887765 345666776654
No 351
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.87 E-value=0.027 Score=56.63 Aligned_cols=49 Identities=12% Similarity=0.050 Sum_probs=39.2
Q ss_pred CCCCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCCh---HHHHHHHHHHHHcC
Q 009708 333 PQPGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINK---GRLRILNETAKLHQ 384 (528)
Q Consensus 333 ~~~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~---~~l~~~~~n~~~~g 384 (528)
..+|+.|||.+||+|..+..+..+ +-+.+++|+++ ..++.+++++++.|
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 367999999999999988777665 46899999999 99999999987765
No 352
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.76 E-value=0.03 Score=56.28 Aligned_cols=71 Identities=11% Similarity=0.011 Sum_probs=48.4
Q ss_pred cEEEEcCccccccccC-CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 388 VIRTIHADLRTFADNS-TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 388 ~i~~~~~D~~~~~~~~-~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
...++++|+....... .++||+|++|||+..... . .|. .....+........|..+.++|||||.+++...
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~-~-----~y~--~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRK-K-----EYG--NLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCS-C-----SSC--SCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcc-c-----ccC--CcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 4678999998754432 468999999999943211 0 111 123344555567789999999999999987644
No 353
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.74 E-value=0.049 Score=54.85 Aligned_cols=100 Identities=16% Similarity=0.211 Sum_probs=62.0
Q ss_pred cCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCE
Q 009708 331 VDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDK 409 (528)
Q Consensus 331 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~ 409 (528)
..+++|++||-.|+|+ |..+++++..+ +.+|+++|.++.+++.++ .+|.+..+.....|...........+|+
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~lGa~~~~d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAK----ELGADLVVNPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHH----HTTCSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----HCCCCEEecCCCccHHHHHHHHhCCCCE
Confidence 4678999999999864 55666777664 359999999999988764 4676531111111111110000136898
Q ss_pred EEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 410 VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 410 Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
|+- |+|.. ..+..++++|++||+++..
T Consensus 234 vid---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 234 AVV---TAVSK-------------------------PAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp EEE---SSCCH-------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred EEE---CCCCH-------------------------HHHHHHHHHhhcCCEEEEe
Confidence 875 33311 1367788889999998853
No 354
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.69 E-value=0.051 Score=54.33 Aligned_cols=99 Identities=18% Similarity=0.120 Sum_probs=62.7
Q ss_pred cCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc-cc-CCCC
Q 009708 331 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DN-STVK 406 (528)
Q Consensus 331 l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~-~~-~~~~ 406 (528)
.++++|++||-.|+ |.|..++++++.+ +.+|+++|.++++++.+++ +|.+..+.....|..... .. ....
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~~~~~~~~~g 209 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKA----LGAWETIDYSHEDVAKRVLELTDGKK 209 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHTTTCC
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEeCCCccHHHHHHHHhCCCC
Confidence 46789999998883 3466666777764 3589999999999887753 565532211111211111 11 1246
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+|+|+- |.|.. .+..+++.|++||+++..
T Consensus 210 ~Dvvid---~~g~~--------------------------~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 210 CPVVYD---GVGQD--------------------------TWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp EEEEEE---SSCGG--------------------------GHHHHHTTEEEEEEEEEC
T ss_pred ceEEEE---CCChH--------------------------HHHHHHHHhcCCCEEEEE
Confidence 998875 43321 267789999999998854
No 355
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.65 E-value=0.043 Score=50.43 Aligned_cols=100 Identities=18% Similarity=0.223 Sum_probs=59.2
Q ss_pred hcCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc-ccccC-CC
Q 009708 330 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADNS-TV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~-~~~~~-~~ 405 (528)
..++++|++||..|+ |.|.....++... +.+|+++|.++++++.++ ..|....+.....|... +.... ..
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~----~~g~~~~~d~~~~~~~~~~~~~~~~~ 106 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLS----RLGVEYVGDSRSVDFADEILELTDGY 106 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHH----TTCCSEEEETTCSTHHHHHHHHTTTC
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----HcCCCEEeeCCcHHHHHHHHHHhCCC
Confidence 356788999999985 3344455555543 358999999998876654 35654211111111111 11111 23
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
.+|.|+.. .| . ..+..+.+.|++||+++..
T Consensus 107 ~~D~vi~~---~g--~------------------------~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 107 GVDVVLNS---LA--G------------------------EAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp CEEEEEEC---CC--T------------------------HHHHHHHHTEEEEEEEEEC
T ss_pred CCeEEEEC---Cc--h------------------------HHHHHHHHHhccCCEEEEE
Confidence 68988853 22 1 0267788999999998854
No 356
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.52 E-value=0.017 Score=56.21 Aligned_cols=69 Identities=13% Similarity=0.222 Sum_probs=45.0
Q ss_pred EEEcCccccccccC-CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 390 RTIHADLRTFADNS-TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 390 ~~~~~D~~~~~~~~-~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
+++++|+....... .++||+|++|||+.. +. .. |. ......+........|..+.++|+|||.+++..|
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~-~~--~~----~d-~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~ 75 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNL-SK--AD----WD-SFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNT 75 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSS-CS--SG----GG-CCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCC-Cc--cc----cc-ccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcC
Confidence 46889987755433 468999999999942 21 00 10 0002333444556778889999999999886654
No 357
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.43 E-value=0.046 Score=54.84 Aligned_cols=102 Identities=21% Similarity=0.132 Sum_probs=64.5
Q ss_pred HhcCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc-ccCCC
Q 009708 329 AVVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DNSTV 405 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~-~~~~~ 405 (528)
....+++|++||-.|| |.|..+++++... +.+|+++|.++++++.+. +.+|.+..+.....|..... ....+
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~ 217 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLV---EELGFDGAIDYKNEDLAAGLKRECPK 217 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH---HTTCCSEEEETTTSCHHHHHHHHCTT
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH---HHcCCCEEEECCCHHHHHHHHHhcCC
Confidence 4567889999999998 4466666777653 359999999999887662 34566532211111221111 11134
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
.+|+|+- |.|. ..+..+++.|++||+++..
T Consensus 218 ~~d~vi~---~~g~--------------------------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 218 GIDVFFD---NVGG--------------------------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp CEEEEEE---SSCH--------------------------HHHHHHHTTEEEEEEEEEC
T ss_pred CceEEEE---CCCc--------------------------chHHHHHHHHhhCCEEEEE
Confidence 6998875 4331 1377889999999998853
No 358
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.25 E-value=0.09 Score=54.32 Aligned_cols=51 Identities=16% Similarity=0.189 Sum_probs=38.5
Q ss_pred CCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCc
Q 009708 332 DPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 387 (528)
Q Consensus 332 ~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~ 387 (528)
.+++|++||=.|+|+ |..++++|+.+ +..+|+++|.++.+++.++ .+|.+.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 261 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA-GASKVILSEPSEVRRNLAK----ELGADH 261 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHH----HHTCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH----HcCCCE
Confidence 578999999999865 55666777764 3348999999999998775 457653
No 359
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.21 E-value=0.063 Score=53.83 Aligned_cols=99 Identities=14% Similarity=0.073 Sum_probs=61.8
Q ss_pred cCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc-c-CCCC
Q 009708 331 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-N-STVK 406 (528)
Q Consensus 331 l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~-~-~~~~ 406 (528)
..+++|++||-.|+ |.|..++++++.. +.+|+++|.++++++.++ .+|.+..+.....|...... . ....
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~ga~~~~~~~~~~~~~~~~~~~~~~g 217 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAK----EYGAEYLINASKEDILRQVLKFTNGKG 217 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCSEEEETTTSCHHHHHHHHTTTSC
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----HcCCcEEEeCCCchHHHHHHHHhCCCC
Confidence 46789999999984 3455666677653 358999999999988664 45755311111112211111 1 1346
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+|+|+- |.|.. .+..++++|++||+++..
T Consensus 218 ~D~vid---~~g~~--------------------------~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 218 VDASFD---SVGKD--------------------------TFEISLAALKRKGVFVSF 246 (334)
T ss_dssp EEEEEE---CCGGG--------------------------GHHHHHHHEEEEEEEEEC
T ss_pred ceEEEE---CCChH--------------------------HHHHHHHHhccCCEEEEE
Confidence 998875 33311 267788899999998854
No 360
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.16 E-value=0.07 Score=53.78 Aligned_cols=99 Identities=14% Similarity=0.115 Sum_probs=63.3
Q ss_pred hcCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc-cC-CC
Q 009708 330 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-NS-TV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~-~~-~~ 405 (528)
...+++|++||=.|| |.|..++++++.+ +.+|++++.++++++.+++ +|.+..+. ...|..+... .. ..
T Consensus 154 ~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~v~~-~~~~~~~~v~~~~~~~ 226 (342)
T 4eye_A 154 RGQLRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKS----VGADIVLP-LEEGWAKAVREATGGA 226 (342)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCSEEEE-SSTTHHHHHHHHTTTS
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCcEEec-CchhHHHHHHHHhCCC
Confidence 456789999999987 4466777777764 3599999999999877664 57653111 1122211111 11 23
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
.+|+|+- |.|.. .+..+++.|++||+++..
T Consensus 227 g~Dvvid---~~g~~--------------------------~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 227 GVDMVVD---PIGGP--------------------------AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp CEEEEEE---SCC----------------------------CHHHHHHTEEEEEEEEEC
T ss_pred CceEEEE---CCchh--------------------------HHHHHHHhhcCCCEEEEE
Confidence 6998875 43321 166788999999998853
No 361
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.16 E-value=0.045 Score=54.46 Aligned_cols=92 Identities=10% Similarity=0.008 Sum_probs=61.1
Q ss_pred HhcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCC
Q 009708 329 AVVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 407 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~f 407 (528)
....+++|++||=.|+|+ |..++++|+.++ .+|++++ ++++++.+++ +|.+. ++. |...+ ...+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~~~----lGa~~---v~~-d~~~v----~~g~ 200 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALAAK----RGVRH---LYR-EPSQV----TQKY 200 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHHHH----HTEEE---EES-SGGGC----CSCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHHHH----cCCCE---EEc-CHHHh----CCCc
Confidence 445678999999999964 667778887753 4999999 9998887754 57643 233 42222 4679
Q ss_pred CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 408 DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 408 D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
|+|| | |+|... +..+++.|++||+++..
T Consensus 201 Dvv~-d--~~g~~~--------------------------~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 201 FAIF-D--AVNSQN--------------------------AAALVPSLKANGHIICI 228 (315)
T ss_dssp EEEE-C--C---------------------------------TTGGGEEEEEEEEEE
T ss_pred cEEE-E--CCCchh--------------------------HHHHHHHhcCCCEEEEE
Confidence 9886 3 433111 35578899999998865
No 362
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.96 E-value=0.26 Score=47.40 Aligned_cols=126 Identities=13% Similarity=0.025 Sum_probs=76.3
Q ss_pred CCCeEEEeCCccc-hHHHHHHHHc-CCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPG-GKTLYMASCL-SGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G-~kt~~la~~~-~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.++|=.|++.+ |++..+|+.+ ..+.+|+.+|.++..++.+.+.++..+-.. +.++..|+.+.... .
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPE-AHLYQIDVQSDEEVINGFEQIGKD 83 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSS-CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCc-EEEEEccCCCHHHHHHHHHHHHHH
Confidence 4778999987653 4555555433 235689999999999998888888776543 67888998764221 1
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHH----HHHHHHHHHHHhccCcCCCEEEEE
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEEL----KILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
.+..|.++.++-..+...+.... ...+.++.... ......+...+..+++.||.+|..
T Consensus 84 ~G~iD~lvnnAg~~~~~~~~~~~---~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVni 145 (256)
T 4fs3_A 84 VGNIDGVYHSIAFANMEDLRGRF---SETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVAT 145 (256)
T ss_dssp HCCCSEEEECCCCCCGGGGTSCG---GGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEE
T ss_pred hCCCCEEEecccccccccccccc---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEE
Confidence 25799999887654432221111 11122222211 111223445667788889988854
No 363
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.92 E-value=0.09 Score=53.46 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=63.0
Q ss_pred hcCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc-ccCCCC
Q 009708 330 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DNSTVK 406 (528)
Q Consensus 330 ~l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~-~~~~~~ 406 (528)
..++++|++||-.|+ |.|..+++++... +.+|++++.++++++.+++ +|.+..+.....|..+.. ......
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~~~~~~~~g 231 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKS----LGCDRPINYKTEPVGTVLKQEYPEG 231 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHCTTC
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH----cCCcEEEecCChhHHHHHHHhcCCC
Confidence 456889999999983 4466677777764 3589999999998877654 676531111111221111 111246
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+|+|+- |.|. ..+..+++.|++||+++..
T Consensus 232 ~D~vid---~~g~--------------------------~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 232 VDVVYE---SVGG--------------------------AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp EEEEEE---CSCT--------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred CCEEEE---CCCH--------------------------HHHHHHHHHHhcCCEEEEE
Confidence 898875 3331 1266788899999998854
No 364
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.87 E-value=0.13 Score=51.92 Aligned_cols=101 Identities=15% Similarity=0.118 Sum_probs=61.6
Q ss_pred cCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEE-cCcccccccc-CCCC
Q 009708 331 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTI-HADLRTFADN-STVK 406 (528)
Q Consensus 331 l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~-~~D~~~~~~~-~~~~ 406 (528)
.++++|++||-.|+ |.|..+.+++... +.+|+++|.++.+++.++ .+|.+..+... ..|....... ..+.
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~----~~g~~~~~d~~~~~~~~~~~~~~~~~~ 238 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFR----SIGGEVFIDFTKEKDIVGAVLKATDGG 238 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHH----HTTCCEEEETTTCSCHHHHHHHHHTSC
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHH----HcCCceEEecCccHhHHHHHHHHhCCC
Confidence 46788999999998 3455666666653 358999999998887654 35654211110 0111111111 1126
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
+|+|+... |. ...+..+++.|++||+++...
T Consensus 239 ~D~vi~~~---g~-------------------------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 239 AHGVINVS---VS-------------------------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp EEEEEECS---SC-------------------------HHHHHHHTTSEEEEEEEEECC
T ss_pred CCEEEECC---Cc-------------------------HHHHHHHHHHHhcCCEEEEEe
Confidence 89887632 21 013778899999999988543
No 365
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.84 E-value=0.091 Score=52.57 Aligned_cols=101 Identities=16% Similarity=0.102 Sum_probs=60.6
Q ss_pred HhcCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc-Ccccccc-ccCC
Q 009708 329 AVVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH-ADLRTFA-DNST 404 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~-~D~~~~~-~~~~ 404 (528)
...++++|++||-.|| |.|..+.+++... +.+|+++|.++++++.++ .+|....+.... .|..... ....
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~----~~g~~~~~d~~~~~~~~~~~~~~~~ 212 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLK----QIGFDAAFNYKTVNSLEEALKKASP 212 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCSEEEETTSCSCHHHHHHHHCT
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----hcCCcEEEecCCHHHHHHHHHHHhC
Confidence 3456789999999997 3444555555543 358999999998887663 346542111111 1111111 1112
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+.+|.|+.. .| . ..+..+++.|++||+++..
T Consensus 213 ~~~d~vi~~---~g--~------------------------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 213 DGYDCYFDN---VG--G------------------------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp TCEEEEEES---SC--H------------------------HHHHHHHTTEEEEEEEEEC
T ss_pred CCCeEEEEC---CC--h------------------------HHHHHHHHHHhcCCEEEEE
Confidence 468988753 22 0 1267788999999998854
No 366
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=93.79 E-value=0.16 Score=60.04 Aligned_cols=80 Identities=13% Similarity=0.218 Sum_probs=57.2
Q ss_pred CeEEEeCCccchHHHHHHHHcCCC-cEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc-------------c
Q 009708 337 QSIVDCCAAPGGKTLYMASCLSGQ-GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD-------------N 402 (528)
Q Consensus 337 ~~VLDl~aG~G~kt~~la~~~~~~-~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~-------------~ 402 (528)
-++|||+||.||.++-+-+. +- -.+.|+|+++.+++..+.|. ++ ..++++|+..+.. .
T Consensus 852 l~viDLFsG~GGlslGfe~A--G~~~vv~avEid~~A~~ty~~N~-----p~-~~~~~~DI~~l~~~~~~gdi~~~~~~~ 923 (1330)
T 3av4_A 852 LRTLDVFSGCGGLSEGFHQA--GISETLWAIEMWDPAAQAFRLNN-----PG-TTVFTEDCNVLLKLVMAGEVTNSLGQR 923 (1330)
T ss_dssp EEEEEETCTTSHHHHHHHHT--TSEEEEEEECCSHHHHHHHHHHC-----TT-SEEECSCHHHHHHHHTTTCSBCSSCCB
T ss_pred ceEEecccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CC-CcEeeccHHHHhHhhhccchhhhhhhh
Confidence 47999999999999887653 21 24789999999999888774 22 3456666553310 0
Q ss_pred C--CCCCCEEEEcCCCCCCccccC
Q 009708 403 S--TVKCDKVLLDAPCSGLGVLSK 424 (528)
Q Consensus 403 ~--~~~fD~Vl~D~Pcsg~G~~~~ 424 (528)
. .+.+|+|+.-|||.+....++
T Consensus 924 lp~~~~vDvl~GGpPCQ~FS~agr 947 (1330)
T 3av4_A 924 LPQKGDVEMLCGGPPCQGFSGMNR 947 (1330)
T ss_dssp CCCTTTCSEEEECCCCTTTCSSSC
T ss_pred ccccCccceEEecCCCcccccccc
Confidence 1 246899999999988766554
No 367
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.78 E-value=0.073 Score=53.73 Aligned_cols=94 Identities=16% Similarity=0.123 Sum_probs=58.9
Q ss_pred CCCeEEEeC-Cc-cchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccc-cccCCCCCCEEE
Q 009708 335 PGQSIVDCC-AA-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF-ADNSTVKCDKVL 411 (528)
Q Consensus 335 ~g~~VLDl~-aG-~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~-~~~~~~~fD~Vl 411 (528)
+|++||=.| +| .|..++++|+.+ +.+|+++|.++++++.+++ +|.+..+. ...|.... .......+|+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~vi~-~~~~~~~~~~~~~~~g~Dvv~ 222 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKK----MGADIVLN-HKESLLNQFKTQGIELVDYVF 222 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHH----HTCSEEEC-TTSCHHHHHHHHTCCCEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCcEEEE-CCccHHHHHHHhCCCCccEEE
Confidence 899999883 43 355667777764 3599999999999887765 57653111 11121111 111234699887
Q ss_pred EcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEE
Q 009708 412 LDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVY 463 (528)
Q Consensus 412 ~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvy 463 (528)
- |+|.. ..+..++++|++||+++.
T Consensus 223 d---~~g~~-------------------------~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 223 C---TFNTD-------------------------MYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp E---SSCHH-------------------------HHHHHHHHHEEEEEEEEE
T ss_pred E---CCCch-------------------------HHHHHHHHHhccCCEEEE
Confidence 4 43311 136778899999999974
No 368
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.74 E-value=0.11 Score=52.34 Aligned_cols=101 Identities=14% Similarity=0.148 Sum_probs=61.7
Q ss_pred cCCCCCCeEEEeCCc--cchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc-ccccCC-CC
Q 009708 331 VDPQPGQSIVDCCAA--PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADNST-VK 406 (528)
Q Consensus 331 l~~~~g~~VLDl~aG--~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~-~~~~~~-~~ 406 (528)
..+++|++||-.|+| .|..+++++.... +.+|+++|.++++++.+++ +|.+..+.....|... ...... +.
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAKR----AGADYVINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHTTTSC
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCCEEecCCCccHHHHHHHHhcCCC
Confidence 567899999999987 4445566666541 3589999999999887643 4654311111111100 111111 46
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+|.|+-. .|.. ..+..++++|++||+++..
T Consensus 241 ~d~vi~~---~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 241 VDAVIDL---NNSE-------------------------KTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp EEEEEES---CCCH-------------------------HHHTTGGGGEEEEEEEEEC
T ss_pred ceEEEEC---CCCH-------------------------HHHHHHHHHHhcCCEEEEE
Confidence 8988753 2211 1367788999999998853
No 369
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.65 E-value=0.091 Score=53.19 Aligned_cols=101 Identities=15% Similarity=0.162 Sum_probs=62.5
Q ss_pred hcCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc-ccCCCC
Q 009708 330 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DNSTVK 406 (528)
Q Consensus 330 ~l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~-~~~~~~ 406 (528)
...+++|++||-.|+ |.|..++++++.. +.+|+++|.++++++.+++ +|.+..+.....|..... ......
T Consensus 162 ~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~~~~~~~g 235 (353)
T 4dup_A 162 MAGLTEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACER----LGAKRGINYRSEDFAAVIKAETGQG 235 (353)
T ss_dssp TTCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHHSSC
T ss_pred hcCCCCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCEEEeCCchHHHHHHHHHhCCC
Confidence 346789999998843 3455666777654 3589999999999987764 566532211111211111 111356
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
+|+|+- |.|.. .+..+++.|++||+++...
T Consensus 236 ~Dvvid---~~g~~--------------------------~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 236 VDIILD---MIGAA--------------------------YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEEEE---SCCGG--------------------------GHHHHHHTEEEEEEEEECC
T ss_pred ceEEEE---CCCHH--------------------------HHHHHHHHhccCCEEEEEE
Confidence 998875 43321 1667888999999988543
No 370
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.61 E-value=0.59 Score=45.81 Aligned_cols=121 Identities=13% Similarity=0.004 Sum_probs=73.7
Q ss_pred CCCeEEEeCCccc-hHHHHHHHHc-CCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPG-GKTLYMASCL-SGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G-~kt~~la~~~-~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|++.| |.+..++..+ ..+.+|+.++.++...+.+++..+..+ .+.++.+|+.+.... .
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHh
Confidence 4778999998754 4666555543 234689999999776666666666554 367888998774321 1
Q ss_pred CCCCCEEEEcCCCCC----CccccCCchhhccCCHHHHHH----HHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 404 TVKCDKVLLDAPCSG----LGVLSKRADLRWNRRLEDMEE----LKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg----~G~~~~~pd~~~~~~~~~~~~----l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
.+..|.++.++-... .+.+.. .+.++... ...-...+++.+...++.+|.+|+.+
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~-------~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYID-------TSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGG-------CCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cCCCCEEEECCccCCcccccccccc-------cCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 247899998765432 111111 22233222 12223345677777777789888654
No 371
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=93.39 E-value=0.3 Score=46.65 Aligned_cols=126 Identities=13% Similarity=-0.011 Sum_probs=75.5
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC--CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC---------
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS--GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--------- 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~--~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~--------- 403 (528)
.+.+||=.| |+|+.+.+++..+- .+.+|+.++.++..++.+.+.++..+. .+.++.+|+.+.....
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL--SPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC--eeEEEECCCCCHHHHHHHHHHHHHh
Confidence 355677555 56888888877653 356899999999888877777776553 3678889987643210
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
.+.+|.|+.++-....+.......-.|. ..+.....-...+++.+...++++|++|+.+.
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~---~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 80 YGGLDVLVNNAGIAFKVADPTPFHIQAE---VTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHH---HHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred cCCCCEEEECCcccccCCCccccHHHHH---hhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 1368999987654322211000001110 11111222234567777888877888887654
No 372
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.34 E-value=0.13 Score=51.74 Aligned_cols=99 Identities=16% Similarity=0.235 Sum_probs=62.2
Q ss_pred cCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc-ccccC-CCC
Q 009708 331 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADNS-TVK 406 (528)
Q Consensus 331 l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~-~~~~~-~~~ 406 (528)
.++++|++||-.|+ |.|..+++++... +.+|+++|.++.+++.+++ +|.+..+.....|..+ +.... ...
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~ga~~~~d~~~~~~~~~~~~~~~~~~ 235 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKA----LGADETVNYTHPDWPKEVRRLTGGKG 235 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTSTTHHHHHHHHTTTTC
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCCEEEcCCcccHHHHHHHHhCCCC
Confidence 36788999999998 4566677777764 3589999999999887753 4654311111111111 11111 246
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+|+|+-. .| +. .+..+++.|+++|+++..
T Consensus 236 ~d~vi~~---~g-~~-------------------------~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 236 ADKVVDH---TG-AL-------------------------YFEGVIKATANGGRIAIA 264 (343)
T ss_dssp EEEEEES---SC-SS-------------------------SHHHHHHHEEEEEEEEES
T ss_pred ceEEEEC---CC-HH-------------------------HHHHHHHhhccCCEEEEE
Confidence 9988853 33 21 156678889999998854
No 373
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.34 E-value=0.085 Score=53.02 Aligned_cols=102 Identities=18% Similarity=0.167 Sum_probs=62.5
Q ss_pred HhcCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc-Cccccccc-cCC
Q 009708 329 AVVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH-ADLRTFAD-NST 404 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~-~D~~~~~~-~~~ 404 (528)
...++++|++||-.|| |.|..+++++... +.+|+++|.++.+++.+++ .+|.+..+.... .|...... ...
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~~~d~~~~~~~~~~~~~~~~ 223 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKT---KFGFDDAFNYKEESDLTAALKRCFP 223 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TSCCSEEEETTSCSCSHHHHHHHCT
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCCceEEecCCHHHHHHHHHHHhC
Confidence 3456789999999997 4455666666653 3589999999998877642 346543111100 11111111 112
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
..+|+|+- |.|. ..+..+++.|++||+++..
T Consensus 224 ~~~d~vi~---~~g~--------------------------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 224 NGIDIYFE---NVGG--------------------------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp TCEEEEEE---SSCH--------------------------HHHHHHHTTEEEEEEEEEC
T ss_pred CCCcEEEE---CCCH--------------------------HHHHHHHHHHhcCCEEEEE
Confidence 46898875 2220 1267788999999998853
No 374
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=93.31 E-value=0.21 Score=50.51 Aligned_cols=98 Identities=15% Similarity=0.075 Sum_probs=60.4
Q ss_pred cCCC-CCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCC
Q 009708 331 VDPQ-PGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCD 408 (528)
Q Consensus 331 l~~~-~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD 408 (528)
..++ +|++||=.|+|+ |..++++|+.++ .+|+++|.++++++.++ +.+|.+..+ -..|..... .....+|
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~~~~~~~~~~~---~~lGa~~vi--~~~~~~~~~-~~~~g~D 246 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAMG--HHVTVISSSNKKREEAL---QDLGADDYV--IGSDQAKMS-ELADSLD 246 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSTTHHHHHH---TTSCCSCEE--ETTCHHHHH-HSTTTEE
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCChHHHHHHH---HHcCCceee--ccccHHHHH-HhcCCCC
Confidence 4667 899999998754 445566666643 58999999998887654 246765422 112211111 1124689
Q ss_pred EEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 409 KVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 409 ~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+||- |+|... .+..++++|++||+++..
T Consensus 247 ~vid---~~g~~~-------------------------~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 247 YVID---TVPVHH-------------------------ALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEEE---CCCSCC-------------------------CSHHHHTTEEEEEEEEEC
T ss_pred EEEE---CCCChH-------------------------HHHHHHHHhccCCEEEEe
Confidence 8874 333210 155677889999988754
No 375
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.28 E-value=0.11 Score=52.48 Aligned_cols=98 Identities=18% Similarity=0.125 Sum_probs=61.0
Q ss_pred hcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcC---cccccccc--C
Q 009708 330 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA---DLRTFADN--S 403 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~---D~~~~~~~--~ 403 (528)
..++ +|++||-.|+|+ |..++++|+.++ ..+|+++|.++++++.++ .+|.+. ++.. |..+.... .
T Consensus 163 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~----~~Ga~~---~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 163 AGPI-SGKSVLITGAGPLGLLGIAVAKASG-AYPVIVSEPSDFRRELAK----KVGADY---VINPFEEDVVKEVMDITD 233 (348)
T ss_dssp TSCC-TTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHHHHH----HHTCSE---EECTTTSCHHHHHHHHTT
T ss_pred hcCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HhCCCE---EECCCCcCHHHHHHHHcC
Confidence 3467 899999999854 555666666542 338999999999988765 356653 2222 21111111 1
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
...+|+|+- |+|. ...+..+++.|++||+++..
T Consensus 234 g~g~D~vid---~~g~-------------------------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 234 GNGVDVFLE---FSGA-------------------------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp TSCEEEEEE---CSCC-------------------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEE---CCCC-------------------------HHHHHHHHHHHhcCCEEEEE
Confidence 236998875 3221 01367778889999998854
No 376
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.00 E-value=0.19 Score=50.25 Aligned_cols=100 Identities=15% Similarity=0.108 Sum_probs=61.4
Q ss_pred hcCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc-cccc-CCC
Q 009708 330 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADN-STV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~-~~~~-~~~ 405 (528)
..++++|++||-.|+ |.|..+.+++... +.+|+++|.++++++.+++ +|.+..+.....|..+ +... ...
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~i~~~~~~~ 213 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCHHTINYSTQDFAEVVREITGGK 213 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHHTTC
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCCHHHHHHHHHHhCCC
Confidence 346788999999985 4455666666653 3589999999988887754 4654211111111111 1110 124
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
.+|+|+- |.|.. .+..+++.|++||+++..
T Consensus 214 ~~d~vi~---~~g~~--------------------------~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 214 GVDVVYD---SIGKD--------------------------TLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp CEEEEEE---CSCTT--------------------------THHHHHHTEEEEEEEEEC
T ss_pred CCeEEEE---CCcHH--------------------------HHHHHHHhhccCCEEEEE
Confidence 6898885 33311 167788999999998753
No 377
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.79 E-value=0.15 Score=50.30 Aligned_cols=91 Identities=21% Similarity=0.150 Sum_probs=59.6
Q ss_pred CCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcc-ccccccCCCCCCE
Q 009708 333 PQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL-RTFADNSTVKCDK 409 (528)
Q Consensus 333 ~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~-~~~~~~~~~~fD~ 409 (528)
+++|++||-.|+ |.|..+++++..+ +.+|+++|.++++++.++ .+|.+. + +..+- .++.... ..+|.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~ga~~-~--~~~~~~~~~~~~~-~~~d~ 192 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPL----ALGAEE-A--ATYAEVPERAKAW-GGLDL 192 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHH----HTTCSE-E--EEGGGHHHHHHHT-TSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----hcCCCE-E--EECCcchhHHHHh-cCceE
Confidence 788999999997 3456667777764 358999999999887764 357653 2 21111 1121111 46898
Q ss_pred EEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEE
Q 009708 410 VLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVY 463 (528)
Q Consensus 410 Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvy 463 (528)
|+- ..- . .+..+++.|++||+++.
T Consensus 193 vid-~g~---~--------------------------~~~~~~~~l~~~G~~v~ 216 (302)
T 1iz0_A 193 VLE-VRG---K--------------------------EVEESLGLLAHGGRLVY 216 (302)
T ss_dssp EEE-CSC---T--------------------------THHHHHTTEEEEEEEEE
T ss_pred EEE-CCH---H--------------------------HHHHHHHhhccCCEEEE
Confidence 874 321 1 16778899999999884
No 378
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=92.67 E-value=0.94 Score=43.74 Aligned_cols=121 Identities=15% Similarity=0.089 Sum_probs=74.7
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccc---------cCC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFAD---------NST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~---------~~~ 404 (528)
.|.++|=-|++. |.+..+|..+- .+.+|+.+|.+++.++.+.+.++..|.+ +..+.+|+.+... ...
T Consensus 8 ~gKvalVTGas~-GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~--~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSAR-GLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD--AHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC--EEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc--EEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 377777777665 56666665442 3569999999999999888888887754 6788999877422 113
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHH----HHHHHHHHHhccC---cCCCEEEEEc
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKI----LQDELLDAASLLV---KPGGVLVYST 465 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~----~q~~lL~~a~~~L---kpGG~LvysT 465 (528)
++.|.++.++-....+.+... +.++.++..+ -...+.+.+...+ +.+|.+|..+
T Consensus 85 G~iDiLVNNAG~~~~~~~~~~-------~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnis 145 (255)
T 4g81_D 85 IHVDILINNAGIQYRKPMVEL-------ELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIG 145 (255)
T ss_dssp CCCCEEEECCCCCCCCCGGGC-------CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred CCCcEEEECCCCCCCCChhhC-------CHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEe
Confidence 578999987754433333332 3333332211 1223445555555 2467877543
No 379
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.64 E-value=0.61 Score=44.62 Aligned_cols=122 Identities=14% Similarity=0.198 Sum_probs=73.9
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.+|.++..++.+.+.+ + ..+.++..|+.+.... ..
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G--PRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G--GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 46788888865 566776666542 3468999999998887666544 2 2478889998874321 02
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
+..|.++.++-.+..+.+...+.-.|. ..+.....-...+++.+...++.+|.+|+.+
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~---~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYD---RQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHH---HHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHH---HHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 468999987655443332222221221 1111112223346777788888889888654
No 380
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.57 E-value=0.17 Score=50.47 Aligned_cols=99 Identities=13% Similarity=0.039 Sum_probs=60.2
Q ss_pred cCCCCCC-eEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCC
Q 009708 331 VDPQPGQ-SIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 407 (528)
Q Consensus 331 l~~~~g~-~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~f 407 (528)
.++++|+ +||-.|+ |.|..++++|+.++ .+|++++.++++++.++ .+|.+..+.....|...........+
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~----~lGa~~~i~~~~~~~~~~~~~~~~~~ 217 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAAEHDYLR----VLGAKEVLAREDVMAERIRPLDKQRW 217 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTTCHHHHH----HTTCSEEEECC---------CCSCCE
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH----HcCCcEEEecCCcHHHHHHHhcCCcc
Confidence 3577786 8999987 45667778887643 57999999998887764 46765322211111000111112468
Q ss_pred CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 408 DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 408 D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
|+|+- |+|... +..+++.+++||+++..
T Consensus 218 d~vid---~~g~~~--------------------------~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 218 AAAVD---PVGGRT--------------------------LATVLSRMRYGGAVAVS 245 (328)
T ss_dssp EEEEE---CSTTTT--------------------------HHHHHHTEEEEEEEEEC
T ss_pred cEEEE---CCcHHH--------------------------HHHHHHhhccCCEEEEE
Confidence 98764 333111 66788899999998853
No 381
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.55 E-value=0.19 Score=50.05 Aligned_cols=100 Identities=14% Similarity=0.044 Sum_probs=60.4
Q ss_pred hcCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc-cccc-CCC
Q 009708 330 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADN-STV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~-~~~~-~~~ 405 (528)
..++++|++||-.|+ |.|..+.+++... +.+|+++|.++++++.+++ +|.+..+.....|... +... ...
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~ 208 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALK----AGAWQVINYREEDLVERLKEITGGK 208 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHTTTC
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCCccHHHHHHHHhCCC
Confidence 346788999999984 3344555555553 3589999999998887754 4654211111111111 1111 123
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
.+|.|+.. .| +. .+..++++|++||+++..
T Consensus 209 ~~D~vi~~---~g-~~-------------------------~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 209 KVRVVYDS---VG-RD-------------------------TWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp CEEEEEEC---SC-GG-------------------------GHHHHHHTEEEEEEEEEC
T ss_pred CceEEEEC---Cc-hH-------------------------HHHHHHHHhcCCCEEEEE
Confidence 68988863 33 11 267788899999998854
No 382
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.37 E-value=0.055 Score=54.36 Aligned_cols=67 Identities=12% Similarity=0.153 Sum_probs=43.4
Q ss_pred cEEEE-cCccccccccC-CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 388 VIRTI-HADLRTFADNS-TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 388 ~i~~~-~~D~~~~~~~~-~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
...++ ++|+....... .++||+|++|||+... . -.|.. ...........|..+.++|+|||.+++..
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~-~------d~~~~----~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIM-L------ADWDD----HMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCC-G------GGGGT----CSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCC-C------CCccC----HHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 35677 99998765433 4689999999999431 0 01210 11122234556888899999999988653
No 383
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=92.33 E-value=1.2 Score=42.79 Aligned_cols=83 Identities=13% Similarity=0.089 Sum_probs=56.8
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc-----CCCCCC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-----STVKCD 408 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~-----~~~~fD 408 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.+|.++..++.+.+.+...+....+.++.+|..+.... ..+..|
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 35677777755 667777766542 35689999999999888777777665444577888888763211 124789
Q ss_pred EEEEcCCCCC
Q 009708 409 KVLLDAPCSG 418 (528)
Q Consensus 409 ~Vl~D~Pcsg 418 (528)
.++.++-...
T Consensus 88 ~lv~nAg~~~ 97 (267)
T 3t4x_A 88 ILINNLGIFE 97 (267)
T ss_dssp EEEECCCCCC
T ss_pred EEEECCCCCC
Confidence 9998765543
No 384
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=92.30 E-value=0.72 Score=45.18 Aligned_cols=125 Identities=14% Similarity=0.021 Sum_probs=74.8
Q ss_pred CCCeEEEeCCcc-chHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAP-GGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~-G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|++. ++.+..+++.+- .+.+|+.+|.++...+.+.+..+..+- +.++.+|+.+.... .
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGV---KLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTC---CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCC---eEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367888888764 466666665442 356899999998777777766666552 46788898774321 0
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHH----HHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEEL----KILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
.+..|.++.++-......+. .+ .+..+.++.... ..-...+++.+...++.+|.+|+.+
T Consensus 106 ~g~iD~lVnnAG~~~~~~~~-~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 106 WGSLDFVVHAVAFSDKNELK-GR--YVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HSCCSEEEECCCCCCHHHHT-SC--GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred cCCCCEEEECCCcCCccccc-CC--hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 14789999876543310000 00 111222333222 2233456777888888889888654
No 385
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.28 E-value=1.1 Score=42.86 Aligned_cols=83 Identities=14% Similarity=0.095 Sum_probs=55.8
Q ss_pred CCCeEEEeCC-ccchHHHHHHHHc-CCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCA-APGGKTLYMASCL-SGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~a-G~G~kt~~la~~~-~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|+ |. |.+.+++..+ ..+.+|+.++.+...++.+.+.++..+-. .+.++.+|+.+.... .
T Consensus 21 ~~k~vlITGasg~-GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGT-GIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLG-RVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSS-SHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSS-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCC-chHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCC-ceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 3667888777 34 3455554433 23568999999999998888877665533 488999999874321 0
Q ss_pred CCCCCEEEEcCCCCCC
Q 009708 404 TVKCDKVLLDAPCSGL 419 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~ 419 (528)
.+..|.++.++-....
T Consensus 99 ~g~id~li~~Ag~~~~ 114 (266)
T 3o38_A 99 AGRLDVLVNNAGLGGQ 114 (266)
T ss_dssp HSCCCEEEECCCCCCC
T ss_pred hCCCcEEEECCCcCCC
Confidence 1468999987665443
No 386
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=92.15 E-value=1.3 Score=43.25 Aligned_cols=80 Identities=13% Similarity=0.004 Sum_probs=55.4
Q ss_pred CCeEEEeCCccchHHHHHHHHcCCC----cEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLSGQ----GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--------- 402 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~~~----~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~--------- 402 (528)
|.+||=.|++ ||.+..++..+-.. .+|+.++.+...++.+.+.+....-...+.++.+|+.+....
T Consensus 33 ~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 33 KKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 6788888865 56777776654211 289999999999988887776653233478889998875321
Q ss_pred CCCCCCEEEEcCCC
Q 009708 403 STVKCDKVLLDAPC 416 (528)
Q Consensus 403 ~~~~fD~Vl~D~Pc 416 (528)
..+..|.++.++-.
T Consensus 112 ~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 112 EFKDIDILVNNAGK 125 (287)
T ss_dssp GGCSCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 12468999987654
No 387
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=92.12 E-value=1.7 Score=41.80 Aligned_cols=126 Identities=14% Similarity=0.063 Sum_probs=74.2
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcC-ChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~-s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.++. +...++.+.+.++..+.. +.++.+|+.+.... .
T Consensus 17 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 17 DGKVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSD--AIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TTCEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC--EEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc--EEEEEcCCCCHHHHHHHHHHHHHH
Confidence 36678877765 566776666543 3457887665 566777777777776643 78889998874321 0
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
.+..|.++.++-....+.+...+.-.|. ..+.....-...+++.+...++++|.+|+.+.
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~---~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFD---RVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHH---HHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHH---HHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 1468999887655433332222211221 11111122233467777788888998887654
No 388
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.10 E-value=2.2 Score=41.00 Aligned_cols=124 Identities=16% Similarity=0.072 Sum_probs=76.2
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCC------------hHHHHHHHHHHHHcCCCccEEEEcCccccccc
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDIN------------KGRLRILNETAKLHQVNSVIRTIHADLRTFAD 401 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s------------~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~ 401 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.+|.+ ...++.+...++..+. .+.++.+|+.+...
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR--KAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS--CEEEEECCTTCHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC--ceEEEEccCCCHHH
Confidence 36678877766 566766666542 34689999987 7777777777776654 37888999887432
Q ss_pred c---------CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 402 N---------STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 402 ~---------~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
. ..+..|.++.++-....+. . .+.-.|. ..+.....-...+++.+...++.+|.+|+.+.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~-~-~~~~~~~---~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGA-H-LPVQAFA---DAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCT-T-CCTHHHH---HHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccC-c-CCHHHHH---HHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 1 0147899998775543331 1 1111111 11111222234567788888888999887643
No 389
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=92.06 E-value=1.1 Score=44.37 Aligned_cols=83 Identities=12% Similarity=0.019 Sum_probs=59.3
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+++.+++..+- .+.+|++++.++..++.+.+.+...+....+.++..|+.+.... ..
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 36678888866 667777776552 34689999999999998888887766544588899998874311 12
Q ss_pred CCCCEEEEcCCCCC
Q 009708 405 VKCDKVLLDAPCSG 418 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg 418 (528)
+..|.++.++-...
T Consensus 86 g~id~lv~nAg~~~ 99 (319)
T 3ioy_A 86 GPVSILCNNAGVNL 99 (319)
T ss_dssp CCEEEEEECCCCCC
T ss_pred CCCCEEEECCCcCC
Confidence 46899998765433
No 390
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=92.05 E-value=1 Score=44.25 Aligned_cols=83 Identities=17% Similarity=0.144 Sum_probs=59.0
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS---------T 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~---------~ 404 (528)
.|.+||=.|++ |+.+.+++..+- .+.+|+.++.++..++.+.+.++..+.. +.++..|+.+..... .
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD--AHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC--EEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc--eEEEEccCCCHHHHHHHHHHHHHhC
Confidence 47788888876 566766666542 3468999999999999888888776643 788899988743210 1
Q ss_pred CCCCEEEEcCCCCCCc
Q 009708 405 VKCDKVLLDAPCSGLG 420 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G 420 (528)
+..|.++.++-....+
T Consensus 107 g~id~lvnnAg~~~~~ 122 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVAG 122 (301)
T ss_dssp SSCSEEEECCCCCCCB
T ss_pred CCCCEEEECCCcCCCC
Confidence 4789999877554433
No 391
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=92.03 E-value=0.2 Score=50.60 Aligned_cols=100 Identities=11% Similarity=0.093 Sum_probs=59.7
Q ss_pred hcCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc-cccc-CCC
Q 009708 330 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADN-STV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~-~~~~-~~~ 405 (528)
..++++|++||-.|+ |.|..+++++... +.+|+++|.++++++.++ .+|.+..+.....|..+ +... ...
T Consensus 157 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~ 230 (354)
T 2j8z_A 157 VGNVQAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAE----KLGAAAGFNYKKEDFSEATLKFTKGA 230 (354)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH----HHTCSEEEETTTSCHHHHHHHHTTTS
T ss_pred hcCCCCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----HcCCcEEEecCChHHHHHHHHHhcCC
Confidence 346788999999884 3445555666553 358999999999988774 34654211111111111 1111 124
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
.+|.|+- |.|... +..+++.|++||+++..
T Consensus 231 ~~d~vi~---~~G~~~--------------------------~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 231 GVNLILD---CIGGSY--------------------------WEKNVNCLALDGRWVLY 260 (354)
T ss_dssp CEEEEEE---SSCGGG--------------------------HHHHHHHEEEEEEEEEC
T ss_pred CceEEEE---CCCchH--------------------------HHHHHHhccCCCEEEEE
Confidence 6898875 333111 56678889999998854
No 392
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.97 E-value=0.25 Score=51.56 Aligned_cols=51 Identities=10% Similarity=0.061 Sum_probs=37.9
Q ss_pred cCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCc
Q 009708 331 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 387 (528)
Q Consensus 331 l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~ 387 (528)
.++++|++||=.|+ |.|..++++++.+ +.+|++++.++++++.++ .+|.+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~----~lGa~~ 268 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVR----ALGCDL 268 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCCC
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----hcCCCE
Confidence 56789999999886 3355666777664 358999999999988764 467764
No 393
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.82 E-value=0.48 Score=48.08 Aligned_cols=98 Identities=16% Similarity=0.100 Sum_probs=58.5
Q ss_pred cCCC-CCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCC
Q 009708 331 VDPQ-PGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCD 408 (528)
Q Consensus 331 l~~~-~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD 408 (528)
..+. +|++||=.|+|+ |..++++|+.+ +.+|++++.++.+++.++ +.+|.+. + +-..+..... ...+.+|
T Consensus 182 ~~~~~~g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~---~~lGa~~-v-~~~~~~~~~~-~~~~~~D 253 (366)
T 1yqd_A 182 FGLDEPGKHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEAL---KNFGADS-F-LVSRDQEQMQ-AAAGTLD 253 (366)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHH---HTSCCSE-E-EETTCHHHHH-HTTTCEE
T ss_pred cCcCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH---HhcCCce-E-EeccCHHHHH-HhhCCCC
Confidence 4566 899999998754 44455666653 358999999998887654 2467653 1 1112211111 1124689
Q ss_pred EEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 409 KVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 409 ~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+|+- |+|... .+..+++.|++||+++..
T Consensus 254 ~vid---~~g~~~-------------------------~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 254 GIID---TVSAVH-------------------------PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EEEE---CCSSCC-------------------------CSHHHHHHEEEEEEEEEC
T ss_pred EEEE---CCCcHH-------------------------HHHHHHHHHhcCCEEEEE
Confidence 8875 333210 145567778889988754
No 394
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.81 E-value=1.6 Score=41.54 Aligned_cols=128 Identities=15% Similarity=0.033 Sum_probs=76.4
Q ss_pred CCCeEEEeCCccc-hHHHHHHHHc-CCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPG-GKTLYMASCL-SGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G-~kt~~la~~~-~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|++.| |.+..++..+ ..+.+|+.++.+....+.+.+..+..+-. .+.++.+|+.+.... .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRN-DSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSC-CCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCC-CceEEeCCCCCHHHHHHHHHHHHHH
Confidence 3678888887743 4565555544 23568999999987777777776666543 478889998874321 0
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHH----HHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEEL----KILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
.+.+|.++.++-....+.... ..+..+.++.... ..-...+++.+...++++|.+|+.+.
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVG---EYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSS---CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred hCCeeEEEEcccccccccccc---chhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 146899998765543110000 0111233333322 22233467778888888898886543
No 395
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=91.80 E-value=0.17 Score=51.12 Aligned_cols=101 Identities=12% Similarity=0.058 Sum_probs=60.8
Q ss_pred hcCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc-cccc-CCC
Q 009708 330 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADN-STV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~-~~~~-~~~ 405 (528)
..++++|++||-.|+ |.|..+++++... +.+|++++.++++++.++ .+|.+..+.....|... +... ...
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~ga~~~~d~~~~~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVL----QNGAHEVFNHREVNYIDKIKKYVGEK 238 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCSEEEETTSTTHHHHHHHHHCTT
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHH----HcCCCEEEeCCCchHHHHHHHHcCCC
Confidence 356789999999997 3455556666653 358999999999887553 45655311111111111 1111 123
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
.+|+|+- |.| . ..+..+++.|++||+++...
T Consensus 239 ~~D~vi~---~~G--~------------------------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 239 GIDIIIE---MLA--N------------------------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp CEEEEEE---SCH--H------------------------HHHHHHHHHEEEEEEEEECC
T ss_pred CcEEEEE---CCC--h------------------------HHHHHHHHhccCCCEEEEEe
Confidence 6898875 222 0 12566788999999988543
No 396
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=91.79 E-value=2.2 Score=41.12 Aligned_cols=122 Identities=16% Similarity=0.068 Sum_probs=74.5
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcC-ChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~-s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|++ |+.+..+++.+- .+.+|+.++. +...++.+.+.++..|.. +.++.+|+.+.... .
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 30 AGKTAFVTGGS-RGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGR--AVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC--EEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc--EEEEECCCCCHHHHHHHHHHHHHH
Confidence 46788888876 566766666543 3457888755 457777777777766643 77888998764321 0
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHH----HHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEEL----KILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
.+..|.++.++-....+.+... +.++.... ..-...+++.+...++++|.+|+.+.
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~-------~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEET-------TVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGC-------CHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred cCCCcEEEECCCCCCCCChhhC-------CHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 2478999987654433332222 22332221 12233467777888888998887644
No 397
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=91.79 E-value=0.19 Score=50.84 Aligned_cols=99 Identities=12% Similarity=0.098 Sum_probs=58.8
Q ss_pred cCCCCC------CeEEEeCCcc-chHH-HHHH-HHcCCCcEEEEEcCChH---HHHHHHHHHHHcCCCccEEEEcCcccc
Q 009708 331 VDPQPG------QSIVDCCAAP-GGKT-LYMA-SCLSGQGLVYAIDINKG---RLRILNETAKLHQVNSVIRTIHADLRT 398 (528)
Q Consensus 331 l~~~~g------~~VLDl~aG~-G~kt-~~la-~~~~~~~~v~avD~s~~---~l~~~~~n~~~~g~~~~i~~~~~D~~~ 398 (528)
..+++| ++||-.|+|+ |..+ +++| +.+ +..+|+++|.+++ +++.++ .+|.+. +.....|..+
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~----~lGa~~-v~~~~~~~~~ 235 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIE----ELDATY-VDSRQTPVED 235 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHH----HTTCEE-EETTTSCGGG
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHH----HcCCcc-cCCCccCHHH
Confidence 456788 9999999843 3444 5555 432 2234999999998 887764 467643 2111112222
Q ss_pred ccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 399 FADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 399 ~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+... .+.||+||- |+|.. ..+..++++|++||+++..
T Consensus 236 i~~~-~gg~Dvvid---~~g~~-------------------------~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 236 VPDV-YEQMDFIYE---ATGFP-------------------------KHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp HHHH-SCCEEEEEE---CSCCH-------------------------HHHHHHHHHEEEEEEEEEC
T ss_pred HHHh-CCCCCEEEE---CCCCh-------------------------HHHHHHHHHHhcCCEEEEE
Confidence 1111 236898874 33311 1367788899999998854
No 398
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=91.77 E-value=1.9 Score=40.44 Aligned_cols=82 Identities=11% Similarity=0.091 Sum_probs=57.5
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 405 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~~ 405 (528)
+.+||=.|+ +|+.+.++++.+- .+.+|+.++.++..++.+.+.++..+.. +.++..|+.+.... ..+
T Consensus 5 ~k~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 5 EKVALVTGA-SRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFK--ARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCC--EEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc--eEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 557777775 4667776666543 3468999999999999888888777643 78889998764311 124
Q ss_pred CCCEEEEcCCCCCCc
Q 009708 406 KCDKVLLDAPCSGLG 420 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G 420 (528)
..|.++.++-....+
T Consensus 82 ~id~li~~Ag~~~~~ 96 (247)
T 3lyl_A 82 AIDILVNNAGITRDN 96 (247)
T ss_dssp CCSEEEECCCCCCCC
T ss_pred CCCEEEECCCCCCCC
Confidence 689999876554333
No 399
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=91.61 E-value=2.1 Score=40.94 Aligned_cols=124 Identities=12% Similarity=0.045 Sum_probs=71.9
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHH-cCCCccEEEEcCcccccccc---------CC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKL-HQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~-~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
|.+||=.|++ |+.+.++++.+- .+.+|+.+|.++..++.+.+.+.. .+-. .+.++.+|+.+.... ..
T Consensus 8 ~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 8 EAVAVVTGGS-SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGA-RLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCc-eEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 6678877766 556666665542 346899999999999888777766 4333 378888998774321 02
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcC--CCEEEEE
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKP--GGVLVYS 464 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkp--GG~Lvys 464 (528)
+..|.++.++-....+.+...+.-.|. ..+.....-...+++.+...++. +|.+|+.
T Consensus 86 g~id~lvnnAg~~~~~~~~~~~~~~~~---~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~i 144 (265)
T 3lf2_A 86 GCASILVNNAGQGRVSTFAETTDEAWS---EELQLKFFSVIHPVRAFLPQLESRADAAIVCV 144 (265)
T ss_dssp CSCSEEEECCCCCCCBCTTTCCHHHHH---HHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHH---HHHHHHHHHHHHHHHHHHHHhhccCCeEEEEE
Confidence 468999987755443333222222221 11111122223345555555543 5666654
No 400
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=91.58 E-value=1.9 Score=41.22 Aligned_cols=78 Identities=13% Similarity=0.019 Sum_probs=55.6
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++. +.+.+++..+- .+.+|+.+|.++..++.+.+.+...+. .+.++.+|+.+.... ..
T Consensus 10 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVGP-ALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR--RALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCCT-THHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCc-HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467888888764 55665555442 356899999999999988888877664 378889998874321 12
Q ss_pred CCCCEEEEcCC
Q 009708 405 VKCDKVLLDAP 415 (528)
Q Consensus 405 ~~fD~Vl~D~P 415 (528)
+..|.++.++-
T Consensus 87 g~id~lv~nAg 97 (264)
T 3ucx_A 87 GRVDVVINNAF 97 (264)
T ss_dssp SCCSEEEECCC
T ss_pred CCCcEEEECCC
Confidence 47899998763
No 401
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=91.51 E-value=0.17 Score=49.34 Aligned_cols=78 Identities=19% Similarity=0.201 Sum_probs=43.6
Q ss_pred cCccccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcCCCCchh
Q 009708 393 HADLRTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTCSIDPEE 472 (528)
Q Consensus 393 ~~D~~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTcs~~~~E 472 (528)
..|+..... .+++|+|++|.....+|. +|. .- .++...++. +++.|..+|+|||.+|.-.--.-...
T Consensus 195 ~lDfg~p~~--~~k~DvV~SDMApn~sGh-------~yq-QC--~DHarii~L-al~fA~~vLkPGGtfV~KvyggaDr~ 261 (320)
T 2hwk_A 195 RLDLGIPGD--VPKYDIIFVNVRTPYKYH-------HYQ-QC--EDHAIKLSM-LTKKACLHLNPGGTCVSIGYGYADRA 261 (320)
T ss_dssp CGGGCSCTT--SCCEEEEEEECCCCCCSC-------HHH-HH--HHHHHHHHH-THHHHGGGEEEEEEEEEEECCCCSHH
T ss_pred ccccCCccc--cCcCCEEEEcCCCCCCCc-------ccc-cc--chHHHHHHH-HHHHHHHhcCCCceEEEEEecCCccc
Confidence 666655332 267999999955444443 000 00 222222333 89999999999999994433333223
Q ss_pred hHHHHHHHHhhC
Q 009708 473 NEERVEAFLLRH 484 (528)
Q Consensus 473 ne~~v~~~l~~~ 484 (528)
.+ .+...|++.
T Consensus 262 se-~lv~~LaR~ 272 (320)
T 2hwk_A 262 SE-SIIGAIARQ 272 (320)
T ss_dssp HH-HHHHHHHTT
T ss_pred HH-HHHHHHHHh
Confidence 34 444555543
No 402
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=91.26 E-value=0.23 Score=49.34 Aligned_cols=95 Identities=16% Similarity=0.175 Sum_probs=60.3
Q ss_pred CCCC--CCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCC
Q 009708 332 DPQP--GQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 407 (528)
Q Consensus 332 ~~~~--g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~f 407 (528)
.+++ |+ ||=.|| +.|..++++|+.++ .+|++++.++++++.+++ +|.+..+. ..|...........+
T Consensus 142 ~~~~~~g~-VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~vi~--~~~~~~~~~~~~~~~ 212 (324)
T 3nx4_A 142 GIRPQDGE-VVVTGASGGVGSTAVALLHKLG--YQVAAVSGRESTHGYLKS----LGANRILS--RDEFAESRPLEKQLW 212 (324)
T ss_dssp TCCGGGCC-EEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGGGHHHHHH----HTCSEEEE--GGGSSCCCSSCCCCE
T ss_pred ccCCCCCe-EEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCCEEEe--cCCHHHHHhhcCCCc
Confidence 3444 45 888876 45777788888753 489999999999988754 67664221 122111111113468
Q ss_pred CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 408 DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 408 D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
|.|+ | |+| . ..+..+++.|+++|+++..
T Consensus 213 d~v~-d--~~g--~------------------------~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 213 AGAI-D--TVG--D------------------------KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp EEEE-E--SSC--H------------------------HHHHHHHHTEEEEEEEEEC
T ss_pred cEEE-E--CCC--c------------------------HHHHHHHHHHhcCCEEEEE
Confidence 8776 4 332 1 1377889999999999854
No 403
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=91.25 E-value=2.1 Score=40.85 Aligned_cols=79 Identities=19% Similarity=0.116 Sum_probs=56.8
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+.+.+++..+- .+.+|+.++.++..++.+.+.+...+. .+.++.+|+.+.... ..
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG--EAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC--ceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 46678877764 677777776552 346899999999999988888877653 378889998764321 02
Q ss_pred CCCCEEEEcCCC
Q 009708 405 VKCDKVLLDAPC 416 (528)
Q Consensus 405 ~~fD~Vl~D~Pc 416 (528)
+..|.|+.++-.
T Consensus 105 g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 GRCDVLVNNAGV 116 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999987654
No 404
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=91.20 E-value=2.5 Score=41.23 Aligned_cols=122 Identities=10% Similarity=-0.036 Sum_probs=74.5
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCC--hHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDIN--KGRLRILNETAKLHQVNSVIRTIHADLRTFADN--------- 402 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s--~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~--------- 402 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.++.+ ....+.+.+.++..|. .+.++.+|+.+....
T Consensus 48 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGGD-SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGR--KAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTC--CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCC--cEEEEEecCCCHHHHHHHHHHHHH
Confidence 36688888865 667777776543 34588888886 4556666666666664 378889998764311
Q ss_pred CCCCCCEEEEcCCCCC-CccccCCchhhccCCHHHHHH----HHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 403 STVKCDKVLLDAPCSG-LGVLSKRADLRWNRRLEDMEE----LKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 403 ~~~~fD~Vl~D~Pcsg-~G~~~~~pd~~~~~~~~~~~~----l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
..+..|.++.++-... .+.+.. .+.++... ...-...+++.+...++.+|.+|+.+.
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~-------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKD-------LTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGG-------CCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HcCCCCEEEECCCCcCCCCCccc-------CCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 0247899998765422 121111 22222222 222334567888888888999887543
No 405
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=91.19 E-value=0.18 Score=52.99 Aligned_cols=51 Identities=10% Similarity=0.017 Sum_probs=38.6
Q ss_pred cCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCc
Q 009708 331 VDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 387 (528)
Q Consensus 331 l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~ 387 (528)
..+++|++||=.|+ |.|..++++|+.+ +.++++++.++.+++.++ .+|.+.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~----~lGa~~ 276 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICR----AMGAEA 276 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HHTCCE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHH----hhCCcE
Confidence 46789999999987 3466777777764 358999999999988774 467664
No 406
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=91.14 E-value=0.67 Score=44.27 Aligned_cols=126 Identities=10% Similarity=-0.050 Sum_probs=75.1
Q ss_pred CCCCeEEEeCCc-cchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------
Q 009708 334 QPGQSIVDCCAA-PGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--------- 402 (528)
Q Consensus 334 ~~g~~VLDl~aG-~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~--------- 402 (528)
..+.+||=.|++ +|+.+.++++.+- .+.+|+.++.+....+.+++..+..+ .+.++.+|+.+....
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHHH
Confidence 357789988874 4777777776542 34689999998776666666666554 256788898774321
Q ss_pred CCCCCCEEEEcCCCCCCccccCCchhhcc-CCHHHHHHHH----HHHHHHHHHHhccCcCCCEEEEEc
Q 009708 403 STVKCDKVLLDAPCSGLGVLSKRADLRWN-RRLEDMEELK----ILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 403 ~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~-~~~~~~~~l~----~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
..+..|.++.++-....+.+... .+. .+.++..... .-...+++.+...++++|.+|+.+
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGD---FLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSC---TTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HcCCCCEEEECCccCccccccCc---cccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 12468999987654332100000 011 2333333322 223456777778887788877654
No 407
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=91.08 E-value=2.1 Score=40.40 Aligned_cols=79 Identities=15% Similarity=0.083 Sum_probs=54.8
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 405 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~~ 405 (528)
|.++|=.|++ |+.+..++..+- .+.+|+.++.++..++.+.+.++..+. .+.++.+|+.+.... ..+
T Consensus 7 ~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 7 GKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA--KVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5678877765 667777766543 345899999999988887777766553 377888998764321 014
Q ss_pred CCCEEEEcCCCC
Q 009708 406 KCDKVLLDAPCS 417 (528)
Q Consensus 406 ~fD~Vl~D~Pcs 417 (528)
..|.++.++-..
T Consensus 84 ~id~lv~nAg~~ 95 (247)
T 2jah_A 84 GLDILVNNAGIM 95 (247)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876543
No 408
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=91.05 E-value=2.3 Score=40.95 Aligned_cols=81 Identities=15% Similarity=0.047 Sum_probs=56.8
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCC-ccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVN-SVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~-~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.+|.++..++.+.+.++..+.. ..+.++.+|+.+.... .
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGGG-SGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 36678877765 566776666542 3568999999999998888888776542 2578889998874321 0
Q ss_pred CCCCCEEEEcCCC
Q 009708 404 TVKCDKVLLDAPC 416 (528)
Q Consensus 404 ~~~fD~Vl~D~Pc 416 (528)
.+..|.++.++-.
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 2468999987654
No 409
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=91.03 E-value=1.7 Score=41.92 Aligned_cols=79 Identities=15% Similarity=0.164 Sum_probs=57.4
Q ss_pred CCCeEEEeCCccchHHHHHHHHc-CCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCL-SGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~-~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.++|=-|++.| .+..+|..+ ..+.+|+.+|.+++.++.+.+.++..|.+ +.++.+|+.+.... ..
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~--~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE--VLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC--EEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCc--EEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3778888887665 565555544 24579999999999999999988888754 77889999874321 12
Q ss_pred CCCCEEEEcCCC
Q 009708 405 VKCDKVLLDAPC 416 (528)
Q Consensus 405 ~~fD~Vl~D~Pc 416 (528)
++.|.++.++-.
T Consensus 83 G~iDiLVNNAGi 94 (254)
T 4fn4_A 83 SRIDVLCNNAGI 94 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 578998887643
No 410
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=90.94 E-value=1.5 Score=42.36 Aligned_cols=83 Identities=11% Similarity=-0.030 Sum_probs=57.1
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.+.+||=.|+ +|+.+..++..+- .+.+|+.++.++..++.+...++..+.. +.++..|+.+.... ..
T Consensus 27 ~~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 27 DKQVAIVTGA-SRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE--GRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCC--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc--EEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 3667776665 4667776666542 3468999999999998888888777654 56788888764321 01
Q ss_pred CCCCEEEEcCCCCCCc
Q 009708 405 VKCDKVLLDAPCSGLG 420 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G 420 (528)
+..|.++.++-....+
T Consensus 104 g~iD~lvnnAg~~~~~ 119 (270)
T 3ftp_A 104 GALNVLVNNAGITQDQ 119 (270)
T ss_dssp SCCCEEEECCCCCCCB
T ss_pred CCCCEEEECCCCCCCC
Confidence 4689999877554433
No 411
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=90.76 E-value=1.3 Score=43.22 Aligned_cols=122 Identities=16% Similarity=0.070 Sum_probs=74.1
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.++|=-|++.| .+..+|..+- .+.+|+.+|.+++.++.+.+ ..|-. +..+.+|+.+.... ..
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~---~~g~~--~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIA---EIGGG--AVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHCTT--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcCCC--eEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4778888887665 5655555442 35699999999988876544 33433 56788898764321 12
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
++.|.++.++-....+.+...++-.|.. -+.-...-...+.+.+..+++.+|.+|..+
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~---~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDD---TFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHH---HHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHH---HHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 5789888877554434333333333431 111112223346778888888888877553
No 412
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=90.75 E-value=0.3 Score=49.27 Aligned_cols=103 Identities=14% Similarity=0.093 Sum_probs=60.7
Q ss_pred HhcCCCCC--CeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccc-cccC
Q 009708 329 AVVDPQPG--QSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF-ADNS 403 (528)
Q Consensus 329 ~~l~~~~g--~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~-~~~~ 403 (528)
...++++| ++||-.|+ |.|..+++++... +.++|+++|.++++++.+++ .+|.+..+.....|.... ....
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~---~~g~~~~~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTS---ELGFDAAINYKKDNVAEQLRESC 227 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHH---TSCCSEEEETTTSCHHHHHHHHC
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHH---HcCCceEEecCchHHHHHHHHhc
Confidence 44578889 99999997 3344445555543 22389999999988876643 256542111111111111 1111
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
.+.+|+|+- |.|. ..+..++++|++||+++..
T Consensus 228 ~~~~d~vi~---~~G~--------------------------~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 228 PAGVDVYFD---NVGG--------------------------NISDTVISQMNENSHIILC 259 (357)
T ss_dssp TTCEEEEEE---SCCH--------------------------HHHHHHHHTEEEEEEEEEC
T ss_pred CCCCCEEEE---CCCH--------------------------HHHHHHHHHhccCcEEEEE
Confidence 226898875 3331 1367788999999998853
No 413
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.73 E-value=0.29 Score=49.24 Aligned_cols=97 Identities=21% Similarity=0.147 Sum_probs=61.3
Q ss_pred hcCCCCCCeEEEeCC-c-cchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc--CCC
Q 009708 330 VVDPQPGQSIVDCCA-A-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--STV 405 (528)
Q Consensus 330 ~l~~~~g~~VLDl~a-G-~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~--~~~ 405 (528)
...+++|++||-.|| | .|..++++++.. +.+|+++ .++.+++.++ .+|.+. +. ...|....... ...
T Consensus 145 ~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~----~lGa~~-i~-~~~~~~~~~~~~~~~~ 215 (343)
T 3gaz_A 145 RAQVQDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVR----DLGATP-ID-ASREPEDYAAEHTAGQ 215 (343)
T ss_dssp TTCCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHH----HHTSEE-EE-TTSCHHHHHHHHHTTS
T ss_pred hcCCCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHH----HcCCCE-ec-cCCCHHHHHHHHhcCC
Confidence 456789999999984 3 466677777764 3589999 8988877654 457653 32 12222211111 134
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
.+|+|+- |.|.. .+..++..|++||+++..
T Consensus 216 g~D~vid---~~g~~--------------------------~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 216 GFDLVYD---TLGGP--------------------------VLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp CEEEEEE---SSCTH--------------------------HHHHHHHHEEEEEEEEES
T ss_pred CceEEEE---CCCcH--------------------------HHHHHHHHHhcCCeEEEE
Confidence 6998874 43311 267788899999998853
No 414
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=90.71 E-value=0.21 Score=49.72 Aligned_cols=99 Identities=19% Similarity=0.077 Sum_probs=60.5
Q ss_pred cCCCCCC-eEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCC
Q 009708 331 VDPQPGQ-SIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKC 407 (528)
Q Consensus 331 l~~~~g~-~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~f 407 (528)
.++++|+ +||=.|| |.|..++++|+.++ .+|++++.++++++.+++ +|.+..+.....|...........+
T Consensus 145 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~~----lGa~~v~~~~~~~~~~~~~~~~~~~ 218 (330)
T 1tt7_A 145 NGLSPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNREAADYLKQ----LGASEVISREDVYDGTLKALSKQQW 218 (330)
T ss_dssp TTCCGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSSTHHHHHH----HTCSEEEEHHHHCSSCCCSSCCCCE
T ss_pred cCcCCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCCcEEEECCCchHHHHHHhhcCCc
Confidence 3567785 8999997 44566677777653 579999999888877653 5765322111111000111112468
Q ss_pred CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 408 DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 408 D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
|+|+- |+|.. .+..+++.+++||+++..
T Consensus 219 d~vid---~~g~~--------------------------~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 219 QGAVD---PVGGK--------------------------QLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp EEEEE---SCCTH--------------------------HHHHHHTTEEEEEEEEEC
T ss_pred cEEEE---CCcHH--------------------------HHHHHHHhhcCCCEEEEE
Confidence 88764 33310 267788999999998854
No 415
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=90.67 E-value=2.3 Score=40.59 Aligned_cols=82 Identities=13% Similarity=0.038 Sum_probs=56.9
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+.+.+++..+- .+.+|+.++.++..++.+.+.++..+-. .+.++.+|+.+.... ..
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSG-KVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSS-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC-cEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 36677777755 667777766542 3458999999999998888877766533 478899998874321 01
Q ss_pred CCCCEEEEcCCCCC
Q 009708 405 VKCDKVLLDAPCSG 418 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg 418 (528)
+..|.++.++-...
T Consensus 87 g~id~lvnnAg~~~ 100 (262)
T 3pk0_A 87 GGIDVVCANAGVFP 100 (262)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 47899998765443
No 416
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=90.64 E-value=1.9 Score=41.37 Aligned_cols=80 Identities=15% Similarity=0.068 Sum_probs=55.1
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc----------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN----------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~----------~ 403 (528)
.|.+||=.|+ +|+.+.+++..+- .+.+|+.++.++..++.+.+.++..+. .+.++.+|+.+.... .
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL--NVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3667887776 4667777766543 346899999999888877766666553 377888998764321 1
Q ss_pred CCCCCEEEEcCCCC
Q 009708 404 TVKCDKVLLDAPCS 417 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcs 417 (528)
.+..|.++.++-..
T Consensus 97 ~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 97 DGKLNILVNNAGVV 110 (273)
T ss_dssp TSCCCEEEECCCCC
T ss_pred CCCCcEEEECCCCC
Confidence 15789999876543
No 417
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=90.63 E-value=1.4 Score=41.91 Aligned_cols=83 Identities=11% Similarity=0.033 Sum_probs=57.4
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.+|.++..++.+.+.++..+. .+.++.+|+.+.... ..
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAA-AGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG--KAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCS-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 36677777765 566666665442 246899999999999888888877664 378889998874321 01
Q ss_pred CCCCEEEEcCCCCCCc
Q 009708 405 VKCDKVLLDAPCSGLG 420 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G 420 (528)
+..|.++.++-....+
T Consensus 88 g~id~lv~nAg~~~~~ 103 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPK 103 (256)
T ss_dssp SCCCEEEECCCCCCCC
T ss_pred CCCCEEEECCCCCCCC
Confidence 4789999877654433
No 418
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=90.62 E-value=1.7 Score=41.81 Aligned_cols=80 Identities=13% Similarity=0.015 Sum_probs=55.8
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 405 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~~ 405 (528)
+.+||=.|++ ||.+..++..+- .+.+|+.++.++..++.+.+.++..+. .+.++.+|+.+.... ..+
T Consensus 4 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 4 DKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG--TALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5567777765 566776666542 356899999999999888888877653 377888898764321 024
Q ss_pred CCCEEEEcCCCCC
Q 009708 406 KCDKVLLDAPCSG 418 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg 418 (528)
..|.++.++-...
T Consensus 81 ~iD~lVnnAG~~~ 93 (264)
T 3tfo_A 81 RIDVLVNNAGVMP 93 (264)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7899998765433
No 419
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=90.58 E-value=0.98 Score=43.05 Aligned_cols=83 Identities=12% Similarity=-0.041 Sum_probs=57.9
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC--------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--------TV 405 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~--------~~ 405 (528)
.|.+||=.|++ ||.+..++..+- .+.+|+.+|.++..++.+.+.++..|. .+.++.+|+.+..... .+
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG--RIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 35678877766 556666666542 346899999999999988888877653 4788999987743210 14
Q ss_pred CCCEEEEcCCCCCCc
Q 009708 406 KCDKVLLDAPCSGLG 420 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G 420 (528)
..|.++.++-....+
T Consensus 83 ~id~lv~nAg~~~~~ 97 (252)
T 3h7a_A 83 PLEVTIFNVGANVNF 97 (252)
T ss_dssp CEEEEEECCCCCCCC
T ss_pred CceEEEECCCcCCCC
Confidence 789999876654433
No 420
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.50 E-value=1.7 Score=41.86 Aligned_cols=81 Identities=21% Similarity=0.052 Sum_probs=55.4
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcC-------------ChHHHHHHHHHHHHcCCCccEEEEcCcccccc
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-------------NKGRLRILNETAKLHQVNSVIRTIHADLRTFA 400 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~-------------s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~ 400 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.+|. ++..++.+.+.++..|. .+.++..|+.+..
T Consensus 14 ~gk~~lVTGas-~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 14 QGRVAFITGAA-RGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR--KALTRVLDVRDDA 90 (280)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC--CEEEEECCTTCHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHH
Confidence 46778877776 566666666542 3568999998 77888887777776664 3778889987643
Q ss_pred cc---------CCCCCCEEEEcCCCCC
Q 009708 401 DN---------STVKCDKVLLDAPCSG 418 (528)
Q Consensus 401 ~~---------~~~~fD~Vl~D~Pcsg 418 (528)
.. ..+..|.++.++-...
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGVLS 117 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 21 0147899998765543
No 421
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=90.48 E-value=3.3 Score=39.66 Aligned_cols=80 Identities=18% Similarity=0.054 Sum_probs=55.9
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.+.+||=.|+ +|+.+.+++..+- .+.+|+++|.++..++.+.+.++..+. .+.++.+|+.+.... ..
T Consensus 30 ~~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGA-GHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA--KVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC--eEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 3567887775 4677877776553 346899999999988887777776553 378889998764211 12
Q ss_pred CCCCEEEEcCCCC
Q 009708 405 VKCDKVLLDAPCS 417 (528)
Q Consensus 405 ~~fD~Vl~D~Pcs 417 (528)
+.+|.|+.++-..
T Consensus 107 g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 107 GDVSILVNNAGVV 119 (272)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 4689999876543
No 422
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=90.40 E-value=0.2 Score=50.36 Aligned_cols=97 Identities=19% Similarity=0.209 Sum_probs=59.8
Q ss_pred hcCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcC---ccccccc-cCC
Q 009708 330 VVDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHA---DLRTFAD-NST 404 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~---D~~~~~~-~~~ 404 (528)
..++ +|++||-.|+|+ |..++++|+.++ ..+|+++|.++++++.+++ + .+. ++.. |...... ...
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~~----l-a~~---v~~~~~~~~~~~~~~~~~ 229 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASG-AGPILVSDPNPYRLAFARP----Y-ADR---LVNPLEEDLLEVVRRVTG 229 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHGGGTT----T-CSE---EECTTTSCHHHHHHHHHS
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----h-HHh---ccCcCccCHHHHHHHhcC
Confidence 4567 899999999854 555667776642 2379999999998877654 2 221 2221 2111110 013
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
..+|+|+- |+|. ...+..+++.|++||+++..
T Consensus 230 ~g~D~vid---~~g~-------------------------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 230 SGVEVLLE---FSGN-------------------------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp SCEEEEEE---CSCC-------------------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEE---CCCC-------------------------HHHHHHHHHHHhcCCEEEEE
Confidence 46998874 3321 11367788889999998854
No 423
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=90.36 E-value=1 Score=44.08 Aligned_cols=82 Identities=11% Similarity=-0.004 Sum_probs=56.1
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+++..+++.+- .+.+|+.+|.++..++.+.+.++..+.. .+.++.+|+.+.... ..
T Consensus 40 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 40 SARSVLVTGGT-KGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAG-NVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSS-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCC-cEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 36677766654 667777666542 3468999999999888877777665533 478899999874321 12
Q ss_pred CCCCEEEEcCCCCC
Q 009708 405 VKCDKVLLDAPCSG 418 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg 418 (528)
+..|.++.++-...
T Consensus 118 g~iD~lvnnAg~~~ 131 (293)
T 3rih_A 118 GALDVVCANAGIFP 131 (293)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 46899998765543
No 424
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=90.32 E-value=1.3 Score=42.81 Aligned_cols=83 Identities=12% Similarity=0.036 Sum_probs=57.8
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.++.++..++.+.+.++..+.. +.++.+|+.+.... ..
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK--ALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCC--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe--EEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 36678877766 566766666542 3468999999999998888888776643 67888998774321 01
Q ss_pred CCCCEEEEcCCCCCCc
Q 009708 405 VKCDKVLLDAPCSGLG 420 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G 420 (528)
+..|.++.++-....+
T Consensus 108 g~iD~lvnnAg~~~~~ 123 (276)
T 3r1i_A 108 GGIDIAVCNAGIVSVQ 123 (276)
T ss_dssp SCCSEEEECCCCCCCC
T ss_pred CCCCEEEECCCCCCCC
Confidence 4799999877554433
No 425
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=90.26 E-value=2 Score=41.36 Aligned_cols=81 Identities=11% Similarity=0.073 Sum_probs=57.1
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+.+..+++.+- .+.+|+.+|.++..++.+.+.++..|.. +.++.+|+.+.... ..
T Consensus 25 ~gk~~lVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 25 GGRTALVTGSS-RGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHD--AEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC--EEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc--eEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 36677777754 667777666542 3468999999999998888888776643 78889998874321 12
Q ss_pred CCCCEEEEcCCCCC
Q 009708 405 VKCDKVLLDAPCSG 418 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg 418 (528)
+..|.++.++-...
T Consensus 102 g~iD~lv~nAg~~~ 115 (271)
T 4ibo_A 102 IDVDILVNNAGIQF 115 (271)
T ss_dssp CCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 47899998765543
No 426
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=90.18 E-value=2.1 Score=40.88 Aligned_cols=122 Identities=9% Similarity=-0.007 Sum_probs=73.5
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCC-CcEEEEEcCC---hHHHHHHHHHHHHcCCCccEEEEcCcccccccc--------
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDIN---KGRLRILNETAKLHQVNSVIRTIHADLRTFADN-------- 402 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~-~~~v~avD~s---~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~-------- 402 (528)
.|.+||=.|++ ||.+..++..+-. +.+|+.++.+ ...++.+.+.++..|. .+.++.+|+.+....
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA--KVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTC--EEEEEECCCCSHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHH
Confidence 36678877766 5677777776643 4578887654 4456655555555443 478889998774321
Q ss_pred -CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHH----HHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 403 -STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEE----LKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 403 -~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~----l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
..+..|.++.++-....+.+.. .+.++... ...-...+++.+...++++|.+|+.+.
T Consensus 87 ~~~g~iD~lvnnAg~~~~~~~~~-------~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS 148 (262)
T 3ksu_A 87 KEFGKVDIAINTVGKVLKKPIVE-------TSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT 148 (262)
T ss_dssp HHHCSEEEEEECCCCCCSSCGGG-------CCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred HHcCCCCEEEECCCCCCCCCccc-------CCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 0146899998765433332222 22233322 222334567777888888898887644
No 427
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=90.15 E-value=0.91 Score=45.71 Aligned_cols=56 Identities=14% Similarity=0.234 Sum_probs=34.7
Q ss_pred hcCCCCCCeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCc
Q 009708 330 VVDPQPGQSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 387 (528)
Q Consensus 330 ~l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~ 387 (528)
..++++|++||=.|+ |.|..++++|+.++ ...|..++.++..-+. .+.++.+|.+.
T Consensus 162 ~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~G-a~vi~~~~~~~~~~~~-~~~~~~lGa~~ 219 (357)
T 1zsy_A 162 FEQLQPGDSVIQNASNSGVGQAVIQIAAALG-LRTINVVRDRPDIQKL-SDRLKSLGAEH 219 (357)
T ss_dssp SSCCCTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEECCCSCHHHH-HHHHHHTTCSE
T ss_pred HhccCCCCEEEEeCCcCHHHHHHHHHHHHcC-CEEEEEecCccchHHH-HHHHHhcCCcE
Confidence 356889999999997 45667788888753 3345555655432211 12345678764
No 428
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.13 E-value=3.8 Score=39.79 Aligned_cols=122 Identities=11% Similarity=0.029 Sum_probs=73.3
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChH-HHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKG-RLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~-~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.++.+.. ..+.+.+.++..+. .+.++.+|+.+.... .
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGV--KCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC--CEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36788888865 566776666543 3468999998865 44555555555553 378899998874321 0
Q ss_pred CCCCCEEEEcCCCCCC-ccccCCchhhccCCHHHHHH----HHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 404 TVKCDKVLLDAPCSGL-GVLSKRADLRWNRRLEDMEE----LKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~-G~~~~~pd~~~~~~~~~~~~----l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
.+..|.++.++-.... +.+.. .+.++... ...-...+++.+...++.+|.+|+.+.
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~-------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEY-------ITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGG-------CCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCcCCCCCccc-------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 2468999987643211 11111 12222222 222334567888888888998887643
No 429
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=90.12 E-value=2.6 Score=41.57 Aligned_cols=84 Identities=21% Similarity=0.132 Sum_probs=55.7
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCC------------hHHHHHHHHHHHHcCCCccEEEEcCccccccc
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDIN------------KGRLRILNETAKLHQVNSVIRTIHADLRTFAD 401 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s------------~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~ 401 (528)
.|.+||=.|++ |+++..++..+- .+.+|+.+|.+ +..++.+.+.++..+. .+.++.+|+.+...
T Consensus 45 ~gk~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 45 QGKVAFITGAA-RGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR--RIIARQADVRDLAS 121 (317)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC--eEEEEECCCCCHHH
Confidence 46677777765 566766665542 35689999886 6777777666666664 37888999876432
Q ss_pred c---------CCCCCCEEEEcCCCCCCcc
Q 009708 402 N---------STVKCDKVLLDAPCSGLGV 421 (528)
Q Consensus 402 ~---------~~~~fD~Vl~D~Pcsg~G~ 421 (528)
. ..+..|.++.++-....+.
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~ 150 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGISNQGE 150 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 1 0147899998876544443
No 430
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=90.08 E-value=0.25 Score=49.75 Aligned_cols=98 Identities=19% Similarity=0.172 Sum_probs=55.2
Q ss_pred hcCCCCCCeEEEeCCc--cchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc-ccCCCC
Q 009708 330 VVDPQPGQSIVDCCAA--PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DNSTVK 406 (528)
Q Consensus 330 ~l~~~~g~~VLDl~aG--~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~-~~~~~~ 406 (528)
...+++|++||=.|++ .|..++++|+.+ +..+|++++ ++.+.+.++ .|.+..+. ...|..... ...+..
T Consensus 137 ~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~-g~~~V~~~~-~~~~~~~~~-----~ga~~~~~-~~~~~~~~~~~~~~~g 208 (349)
T 4a27_A 137 VANLREGMSVLVHSAGGGVGQAVAQLCSTV-PNVTVFGTA-STFKHEAIK-----DSVTHLFD-RNADYVQEVKRISAEG 208 (349)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHTTS-TTCEEEEEE-CGGGHHHHG-----GGSSEEEE-TTSCHHHHHHHHCTTC
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCcEEEEeC-CHHHHHHHH-----cCCcEEEc-CCccHHHHHHHhcCCC
Confidence 4567899999999883 344555666543 246899988 665555443 56654222 222222111 112357
Q ss_pred CCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 407 CDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 407 fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
+|+||- |+|.. .+..++++|++||+++..
T Consensus 209 ~Dvv~d---~~g~~--------------------------~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 209 VDIVLD---CLCGD--------------------------NTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp EEEEEE---ECC---------------------------------CTTEEEEEEEEEE
T ss_pred ceEEEE---CCCch--------------------------hHHHHHHHhhcCCEEEEE
Confidence 998874 43311 146688999999999854
No 431
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=90.06 E-value=1.8 Score=41.42 Aligned_cols=81 Identities=14% Similarity=0.035 Sum_probs=55.6
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHH-cCCCccEEEEcCcccccccc---------CC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKL-HQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~-~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
|.+||=.|++ |+.+.++++.+- .+.+|+.++.++..++.+.+.+.. .+. .+.++.+|+.+.... ..
T Consensus 20 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 20 GKRALITGAT-KGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT--DVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 6677777765 566776666543 346899999999998887776655 443 378899998874321 01
Q ss_pred CCCCEEEEcCCCCCC
Q 009708 405 VKCDKVLLDAPCSGL 419 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~ 419 (528)
+..|.++.++-....
T Consensus 97 g~id~lv~nAg~~~~ 111 (266)
T 4egf_A 97 GGLDVLVNNAGISHP 111 (266)
T ss_dssp TSCSEEEEECCCCCC
T ss_pred CCCCEEEECCCcCCC
Confidence 478999988755443
No 432
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=90.06 E-value=1.7 Score=41.81 Aligned_cols=126 Identities=13% Similarity=0.019 Sum_probs=73.7
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEE-cCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAI-DINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~av-D~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|++ |+.+..++..+- .+.+|+.+ ..++..++.+.+.++..+. .+.++.+|+.+.... .
T Consensus 26 ~~k~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 26 TNKVAIVTGAS-RGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG--KALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp -CCEEEEESCS-SHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 36678877765 456666665442 24577766 5677778777777777664 377888998874321 0
Q ss_pred CCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 404 TVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
.+..|.++.++-....+.+...++-.|. ..+.....-...+++.+...++.+|.+|+.+.
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~---~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFD---RVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHH---HHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHH---HHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 1468999987655433333222222221 11111222233456777777788888887653
No 433
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.03 E-value=0.55 Score=46.56 Aligned_cols=95 Identities=15% Similarity=0.077 Sum_probs=59.3
Q ss_pred HhcCCCCCCeEEEeC-Cc-cchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccc-ccccCCC
Q 009708 329 AVVDPQPGQSIVDCC-AA-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRT-FADNSTV 405 (528)
Q Consensus 329 ~~l~~~~g~~VLDl~-aG-~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~-~~~~~~~ 405 (528)
....+++|++||=.| +| .|..++++|+.+ +.+|++++ ++.+++. ++.+|.+.. +..+-.+ +... ..
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~----~~~lGa~~~---i~~~~~~~~~~~-~~ 214 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAF----LKALGAEQC---INYHEEDFLLAI-ST 214 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHH----HHHHTCSEE---EETTTSCHHHHC-CS
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHH----HHHcCCCEE---EeCCCcchhhhh-cc
Confidence 446788999999885 44 366777888765 35899887 5555544 455787642 2221111 2111 24
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEE
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVY 463 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvy 463 (528)
.+|+|+- |+|.. .+..++++|++||+++.
T Consensus 215 g~D~v~d---~~g~~--------------------------~~~~~~~~l~~~G~iv~ 243 (321)
T 3tqh_A 215 PVDAVID---LVGGD--------------------------VGIQSIDCLKETGCIVS 243 (321)
T ss_dssp CEEEEEE---SSCHH--------------------------HHHHHGGGEEEEEEEEE
T ss_pred CCCEEEE---CCCcH--------------------------HHHHHHHhccCCCEEEE
Confidence 6898874 43311 14678899999999885
No 434
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=90.02 E-value=0.52 Score=47.54 Aligned_cols=103 Identities=15% Similarity=0.118 Sum_probs=58.9
Q ss_pred cCCCCC-CeEEEeCC--ccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEc---Ccccccccc--
Q 009708 331 VDPQPG-QSIVDCCA--APGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIH---ADLRTFADN-- 402 (528)
Q Consensus 331 l~~~~g-~~VLDl~a--G~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~---~D~~~~~~~-- 402 (528)
.++++| ++||=.|+ +.|..++++|+.++ .+++++..++..+...++.++.+|.+..+.... .|+......
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t 239 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLN--FNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWI 239 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHT--CEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHH
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCC--CEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHh
Confidence 367889 99998886 34666778887653 577777655544322233445678764222111 122111110
Q ss_pred --CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 403 --STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 403 --~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
....+|+||- |+|.. . +..++++|++||+++..
T Consensus 240 ~~~~~g~Dvvid---~~G~~-------------------------~-~~~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 240 KQSGGEAKLALN---CVGGK-------------------------S-STGIARKLNNNGLMLTY 274 (364)
T ss_dssp HHHTCCEEEEEE---SSCHH-------------------------H-HHHHHHTSCTTCEEEEC
T ss_pred hccCCCceEEEE---CCCch-------------------------h-HHHHHHHhccCCEEEEe
Confidence 1246998874 33311 1 22678999999998854
No 435
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=89.85 E-value=2.6 Score=40.08 Aligned_cols=78 Identities=17% Similarity=0.104 Sum_probs=54.1
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 405 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~~ 405 (528)
|.+||=.|++ |+.+.++++.+- .+.+|+.+|.++..++.+.+.++..+. .+.++.+|+.+.... ..+
T Consensus 6 ~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 6 EKVVIITGGS-SGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG--QILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTT--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5677766654 667777766542 346899999999998888777665443 478889998874321 014
Q ss_pred CCCEEEEcCCC
Q 009708 406 KCDKVLLDAPC 416 (528)
Q Consensus 406 ~fD~Vl~D~Pc 416 (528)
..|.++.++-.
T Consensus 83 ~id~lv~nAg~ 93 (257)
T 3imf_A 83 RIDILINNAAG 93 (257)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987654
No 436
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=89.67 E-value=3 Score=39.63 Aligned_cols=80 Identities=14% Similarity=0.048 Sum_probs=54.7
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc----------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN----------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~----------~ 403 (528)
.|.+||=.|+ +|+.+.+++..+- .+.+|+.++.++..++.+.+.++..+. .+.++.+|+.+.... .
T Consensus 8 ~~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 8 EGCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF--KVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3667887776 5677777766543 346899999999888877666665543 477888998764211 1
Q ss_pred CCCCCEEEEcCCCC
Q 009708 404 TVKCDKVLLDAPCS 417 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcs 417 (528)
.+..|.++.++-..
T Consensus 85 ~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 85 HGKLNILVNNAGIV 98 (260)
T ss_dssp TTCCCEEEECCCCC
T ss_pred CCCCCEEEECCCCC
Confidence 15789999876543
No 437
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=89.65 E-value=4.3 Score=38.85 Aligned_cols=80 Identities=18% Similarity=0.085 Sum_probs=56.8
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 405 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~~ 405 (528)
+.+||=.|+ +|+.+.++++.+- .+.+|++++.++..++.+.+.++..+....+.++.+|+.+.... ..+
T Consensus 32 ~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 32 DRLALVTGA-SGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 567777775 5677777776542 34689999999999888877777777655678888998764321 013
Q ss_pred CCCEEEEcCCC
Q 009708 406 KCDKVLLDAPC 416 (528)
Q Consensus 406 ~fD~Vl~D~Pc 416 (528)
.+|.|+.++-.
T Consensus 111 ~iD~vi~~Ag~ 121 (279)
T 1xg5_A 111 GVDICINNAGL 121 (279)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987644
No 438
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=89.65 E-value=3.1 Score=39.36 Aligned_cols=78 Identities=13% Similarity=-0.006 Sum_probs=52.9
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 405 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~~ 405 (528)
+.+||=.|+ +|+.+.+++..+- .+.+|+.++.++..++.+.+.++..+. .+.++.+|+.+.... ..+
T Consensus 2 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g 78 (256)
T 1geg_A 2 KKVALVTGA-GQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG--HAVAVKVDVSDRDQVFAAVEQARKTLG 78 (256)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 345666665 4667777766543 345899999999888877776666553 377888898764311 024
Q ss_pred CCCEEEEcCCC
Q 009708 406 KCDKVLLDAPC 416 (528)
Q Consensus 406 ~fD~Vl~D~Pc 416 (528)
.+|.++.++-.
T Consensus 79 ~id~lv~nAg~ 89 (256)
T 1geg_A 79 GFDVIVNNAGV 89 (256)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999987654
No 439
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=89.64 E-value=3.5 Score=39.70 Aligned_cols=120 Identities=18% Similarity=0.057 Sum_probs=69.7
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHH-HHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGR-LRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~-l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
|.+||=.|+ +|+.+.++++.+- .+.+|+.++.++.. .+.+.+.++..|. .+.++.+|+.+.... ..
T Consensus 29 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 29 GKVALVTGA-GRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS--DAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCC--CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 567777765 4677777776553 34589999988653 4555555555553 377888898764211 01
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHH----HHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEEL----KILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
+..|.++.++-....+.+.. .+.++.... ..-...+++.+...++.+|.+|+.+
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~-------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKD-------VTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGG-------CCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred CCCCEEEECCCcCCCCCccc-------CCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 46899998765433222211 222332221 1222345666677677788888654
No 440
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=89.58 E-value=3.5 Score=39.86 Aligned_cols=126 Identities=11% Similarity=-0.011 Sum_probs=73.7
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChH-------HHHHHHHHHHHcCCCccEEEEcCcccccccc----
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKG-------RLRILNETAKLHQVNSVIRTIHADLRTFADN---- 402 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~-------~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---- 402 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.++.++. .++.+.+.++..+. .+.++.+|+.+....
T Consensus 8 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 8 RGKTMFISGGS-RGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG--QALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS--EEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHH
Confidence 36678877766 566776666553 3458999999876 45555555655553 478889998874321
Q ss_pred -----CCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCc--CCCEEEEEcC
Q 009708 403 -----STVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVK--PGGVLVYSTC 466 (528)
Q Consensus 403 -----~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~Lk--pGG~LvysTc 466 (528)
..+..|.++.++-....+.+...+.-.|. ..+.-...-...+.+.+...++ .+|.+|+.+.
T Consensus 85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~---~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS 152 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFD---LMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSP 152 (285)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHH---HHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCC
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH---HHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence 02479999987755443333322222221 1111122233446777777775 3577776543
No 441
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=89.57 E-value=2.1 Score=41.36 Aligned_cols=83 Identities=13% Similarity=0.041 Sum_probs=57.2
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 405 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~~ 405 (528)
+.+||=.|++ |+.+.+++..+- .+.+|+.++.++..++.+.+.++..+. .+.++.+|+.+.... ..+
T Consensus 24 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 24 PQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH--DVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp -CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 6678888865 566766665442 356899999999999888887776654 378889998764321 024
Q ss_pred CCCEEEEcCCCCCCcc
Q 009708 406 KCDKVLLDAPCSGLGV 421 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~ 421 (528)
..|.++.++-....+.
T Consensus 101 ~id~lv~nAg~~~~~~ 116 (279)
T 3sju_A 101 PIGILVNSAGRNGGGE 116 (279)
T ss_dssp SCCEEEECCCCCCCSC
T ss_pred CCcEEEECCCCCCCCC
Confidence 7899998776544333
No 442
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=89.52 E-value=0.61 Score=47.20 Aligned_cols=99 Identities=13% Similarity=0.071 Sum_probs=58.8
Q ss_pred hcCCC--C-------CCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCCh---HHHHHHHHHHHHcCCCccEEEEcCcc
Q 009708 330 VVDPQ--P-------GQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINK---GRLRILNETAKLHQVNSVIRTIHADL 396 (528)
Q Consensus 330 ~l~~~--~-------g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~---~~l~~~~~n~~~~g~~~~i~~~~~D~ 396 (528)
..+++ + |++||-.|+|+ |..+++++..+ +.+|+++|.++ ++++.++ .+|.+. +. ..|.
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~----~~ga~~-v~--~~~~ 236 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIE----ETKTNY-YN--SSNG 236 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHH----HHTCEE-EE--CTTC
T ss_pred ccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHH----HhCCce-ec--hHHH
Confidence 44566 7 99999999843 33445555543 24999999998 7776654 356542 21 1121
Q ss_pred ccccccCCCCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHH-HHHhccCcCCCEEEEEc
Q 009708 397 RTFADNSTVKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELL-DAASLLVKPGGVLVYST 465 (528)
Q Consensus 397 ~~~~~~~~~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL-~~a~~~LkpGG~LvysT 465 (528)
.+........+|+|+- |+|... .+ +.+++.|++||+++...
T Consensus 237 ~~~~~~~~~~~d~vid---~~g~~~-------------------------~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 237 YDKLKDSVGKFDVIID---ATGADV-------------------------NILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp SHHHHHHHCCEEEEEE---CCCCCT-------------------------HHHHHHGGGEEEEEEEEECS
T ss_pred HHHHHHhCCCCCEEEE---CCCChH-------------------------HHHHHHHHHHhcCCEEEEEe
Confidence 1110001146898875 322110 25 77889999999988543
No 443
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=89.40 E-value=2.3 Score=41.21 Aligned_cols=80 Identities=15% Similarity=0.021 Sum_probs=55.3
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.+.+||=.|++ |+.+.+++..+- .+.+|+.+|.++..++.+.+.+...+. .+.++.+|+.+.... ..
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 27 PSPVALITGAG-SGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG--QAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 36678877765 566766665442 356899999999998887777765543 378889998774321 02
Q ss_pred CCCCEEEEcCCCC
Q 009708 405 VKCDKVLLDAPCS 417 (528)
Q Consensus 405 ~~fD~Vl~D~Pcs 417 (528)
+..|.++.++-..
T Consensus 104 g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 104 GHLDIVVANAGIN 116 (283)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4799999876543
No 444
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=89.30 E-value=2.8 Score=39.92 Aligned_cols=80 Identities=13% Similarity=-0.018 Sum_probs=54.3
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEE-cCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAI-DINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~av-D~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.+ +.++..++.+.+.++..+. .+.++.+|+.+.... .
T Consensus 3 ~~k~vlVTGas-~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 3 QNKCALVTGSS-RGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV--KVLVVKANVGQPAKIKEMFQQIDET 79 (258)
T ss_dssp CCCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35677766654 677777776553 34577775 8999888888777776664 378889998874321 0
Q ss_pred CCCCCEEEEcCCCC
Q 009708 404 TVKCDKVLLDAPCS 417 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcs 417 (528)
.++.|.++.++-..
T Consensus 80 ~g~id~lv~nAg~~ 93 (258)
T 3oid_A 80 FGRLDVFVNNAASG 93 (258)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 24689999876543
No 445
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=89.27 E-value=2.7 Score=40.35 Aligned_cols=81 Identities=19% Similarity=0.133 Sum_probs=54.5
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcC-------------ChHHHHHHHHHHHHcCCCccEEEEcCcccccc
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-------------NKGRLRILNETAKLHQVNSVIRTIHADLRTFA 400 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~-------------s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~ 400 (528)
.|.+||=.|++ |+.+.+++..+- .+.+|+.+|. ++..++.+.+.++..+. .+.++..|+.+..
T Consensus 10 ~~k~~lVTGas-~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 10 EGRVAFITGAA-RGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR--RIVAAVVDTRDFD 86 (277)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCHH
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC--eEEEEECCCCCHH
Confidence 36678877766 556666665442 3568999998 67777777777766654 3788889987743
Q ss_pred cc---------CCCCCCEEEEcCCCCC
Q 009708 401 DN---------STVKCDKVLLDAPCSG 418 (528)
Q Consensus 401 ~~---------~~~~fD~Vl~D~Pcsg 418 (528)
.. ..+..|.++.++-...
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~~~ 113 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGVAA 113 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 21 0146899998765543
No 446
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=89.16 E-value=4.2 Score=38.88 Aligned_cols=80 Identities=15% Similarity=0.074 Sum_probs=53.3
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHH-HHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETA-KLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~-~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.+.+||=.|++ |+.+.++++.+- .+.+|++++.++..++.+.+.+ +..+. .+.++.+|+.+.... .
T Consensus 20 ~~k~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 20 RGRVALVTGGS-RGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV--ETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35677777754 677777776543 3468999999998887766655 44443 367788898764211 0
Q ss_pred CCCCCEEEEcCCCC
Q 009708 404 TVKCDKVLLDAPCS 417 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcs 417 (528)
.+.+|.++.++-..
T Consensus 97 ~g~iD~lvnnAg~~ 110 (267)
T 1vl8_A 97 FGKLDTVVNAAGIN 110 (267)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCcC
Confidence 14689999876543
No 447
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=89.13 E-value=3 Score=39.14 Aligned_cols=74 Identities=23% Similarity=0.267 Sum_probs=49.0
Q ss_pred CCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc--------CCCCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN--------STVKC 407 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~--------~~~~f 407 (528)
|.+||=.|+ +|+.+.++++.+..++.|++++.++..++.+.+ .. .+.++..|+.+.... ..+..
T Consensus 5 ~k~vlITGa-s~gIG~~~a~~l~~g~~v~~~~r~~~~~~~~~~------~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~i 76 (245)
T 3e9n_A 5 KKIAVVTGA-TGGMGIEIVKDLSRDHIVYALGRNPEHLAALAE------IE-GVEPIESDIVKEVLEEGGVDKLKNLDHV 76 (245)
T ss_dssp -CEEEEEST-TSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHT------ST-TEEEEECCHHHHHHTSSSCGGGTTCSCC
T ss_pred CCEEEEEcC-CCHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHh------hc-CCcceecccchHHHHHHHHHHHHhcCCC
Confidence 556777775 467888888877667899999999888765543 22 377888887654211 12468
Q ss_pred CEEEEcCCCC
Q 009708 408 DKVLLDAPCS 417 (528)
Q Consensus 408 D~Vl~D~Pcs 417 (528)
|.++.++-..
T Consensus 77 d~lv~~Ag~~ 86 (245)
T 3e9n_A 77 DTLVHAAAVA 86 (245)
T ss_dssp SEEEECC---
T ss_pred CEEEECCCcC
Confidence 9999876543
No 448
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=89.06 E-value=3 Score=40.25 Aligned_cols=121 Identities=13% Similarity=0.006 Sum_probs=67.7
Q ss_pred CCCeEEEeCCcc-chHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAP-GGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~-G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|+++ |+.+.+++..+- .+.+|+.++.++..-+.+++..+..+ + +.++.+|+.+.... .
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~-~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG--S-DLVVKCDVSLDEDIKNLKKFLEEN 96 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--C-CCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--C-eEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367889888863 778877776553 34689999998752223333223333 2 45778888764211 1
Q ss_pred CCCCCEEEEcCCCCCC----ccccCCchhhccCCHHHHHHH----HHHHHHHHHHHhccCc-CCCEEEEEc
Q 009708 404 TVKCDKVLLDAPCSGL----GVLSKRADLRWNRRLEDMEEL----KILQDELLDAASLLVK-PGGVLVYST 465 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~----G~~~~~pd~~~~~~~~~~~~l----~~~q~~lL~~a~~~Lk-pGG~LvysT 465 (528)
.+..|.++.++-.... +.+. ..+.++.... ..-...+++.+...++ .+|++|+.+
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~-------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~is 160 (285)
T 2p91_A 97 WGSLDIIVHSIAYAPKEEFKGGVI-------DTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLS 160 (285)
T ss_dssp TSCCCEEEECCCCCCGGGGSSCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEE
T ss_pred cCCCCEEEECCCCCCcccCCCCcc-------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 2478999987654321 1111 1222332221 1122345666666665 578888654
No 449
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=88.98 E-value=1.1 Score=45.30 Aligned_cols=95 Identities=13% Similarity=0.023 Sum_probs=59.6
Q ss_pred CCCCeEEEeCCc--cchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccc-ccCCCCCCEE
Q 009708 334 QPGQSIVDCCAA--PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFA-DNSTVKCDKV 410 (528)
Q Consensus 334 ~~g~~VLDl~aG--~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~-~~~~~~fD~V 410 (528)
++|++||=.|++ .|..++++|+.+ +.+|+++. ++++++.+ +.+|.+..+.....|..+.. ....+.+|+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~-~~~~~~~~----~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v 235 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS--GYIPIATC-SPHNFDLA----KSRGAEEVFDYRAPNLAQTIRTYTKNNLRYA 235 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHH----HHTTCSEEEETTSTTHHHHHHHHTTTCCCEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CHHHHHHH----HHcCCcEEEECCCchHHHHHHHHccCCccEE
Confidence 789999999983 677888888874 35888884 88887755 45787642221122222111 1113459988
Q ss_pred EEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccC-cCCCEEEE
Q 009708 411 LLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLV-KPGGVLVY 463 (528)
Q Consensus 411 l~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~L-kpGG~Lvy 463 (528)
+- |+|.. ..+..+++.| ++||+++.
T Consensus 236 ~d---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 236 LD---CITNV-------------------------ESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp EE---SSCSH-------------------------HHHHHHHHHSCTTCEEEEE
T ss_pred EE---CCCch-------------------------HHHHHHHHHhhcCCCEEEE
Confidence 74 43311 1367778888 69999885
No 450
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=88.95 E-value=1.7 Score=41.75 Aligned_cols=121 Identities=12% Similarity=0.000 Sum_probs=69.2
Q ss_pred CCCeEEEeCCc-cchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAA-PGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG-~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|++ +|+.+.+++..+- .+.+|+.++.++..-+.+++..+..+ . +.++.+|+.+.... .
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~-~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN--S-PYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT--C-CCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--C-cEEEEcCCCCHHHHHHHHHHHHHH
Confidence 36688888886 4788888877653 34589999998762222333223333 2 56778888764211 1
Q ss_pred CCCCCEEEEcCCCCCC----ccccCCchhhccCCHHHHHHH----HHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 404 TVKCDKVLLDAPCSGL----GVLSKRADLRWNRRLEDMEEL----KILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~----G~~~~~pd~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
.+..|.++.++-.... +.+. ..+.++.... ..-...+++.+...++++|++|+.+
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~-------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (275)
T 2pd4_A 82 LGSLDFIVHSVAFAPKEALEGSLL-------ETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLS 144 (275)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCCCEEEECCccCccccCCCCcc-------cCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 2468999887644321 1111 1222333221 2223446677777777778888654
No 451
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=88.93 E-value=4.1 Score=39.65 Aligned_cols=80 Identities=23% Similarity=0.156 Sum_probs=54.3
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCC------------hHHHHHHHHHHHHcCCCccEEEEcCccccccc
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDIN------------KGRLRILNETAKLHQVNSVIRTIHADLRTFAD 401 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s------------~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~ 401 (528)
.|.+||=.|++. |++..++..+- .+.+|+.+|.+ +..++.+.+.++..+. .+.++..|+.+...
T Consensus 27 ~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 27 EGKVAFITGAAR-GQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR--RIIASQVDVRDFDA 103 (299)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC--ceEEEECCCCCHHH
Confidence 466888888764 56666665442 35689999987 7777777777776664 37889999887432
Q ss_pred c---------CCCCCCEEEEcCCCC
Q 009708 402 N---------STVKCDKVLLDAPCS 417 (528)
Q Consensus 402 ~---------~~~~fD~Vl~D~Pcs 417 (528)
. ..+..|.++.++-..
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCC
Confidence 1 014789999876543
No 452
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=88.91 E-value=3.2 Score=39.42 Aligned_cols=80 Identities=18% Similarity=0.091 Sum_probs=53.1
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.+|.++..++.+...+ +- .+.++.+|+.+.... ..
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 7 EGKSALITGSA-RGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GP--AAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CT--TEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC--CceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 46678877755 677777766542 3468999999988876655443 32 367888998764321 12
Q ss_pred CCCCEEEEcCCCCCCc
Q 009708 405 VKCDKVLLDAPCSGLG 420 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G 420 (528)
+..|.++.++-....+
T Consensus 81 g~id~lv~~Ag~~~~~ 96 (259)
T 4e6p_A 81 GGLDILVNNAALFDLA 96 (259)
T ss_dssp SSCCEEEECCCCCCCB
T ss_pred CCCCEEEECCCcCCCC
Confidence 4799999887654433
No 453
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=88.88 E-value=1.5 Score=41.71 Aligned_cols=120 Identities=13% Similarity=-0.034 Sum_probs=70.6
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcC-ChHHHHHHHHHHHHcCCCccEEEEcCccccccccC---------C
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS---------T 404 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~-s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~---------~ 404 (528)
+.+||=.|+ +|+.+.++++.+- .+.+|++++. ++..++.+.+.++..+. .+.++.+|+.+..... .
T Consensus 21 ~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 21 GKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA--QGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 567876664 5778887777553 2458999998 88888777776666553 3778889987643210 1
Q ss_pred CCCCEEEEcCCCCCCccccCCchhhccCCHHHHHHH----HHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 405 VKCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEEL----KILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
+.+|.|+.++-....+.+.. .+.++.... ..-...+++.+...++.+|.+|+.+
T Consensus 98 ~~~d~vi~~Ag~~~~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~s 155 (274)
T 1ja9_A 98 GGLDFVMSNSGMEVWCDELE-------VTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS 155 (274)
T ss_dssp SCEEEEECCCCCCCCCCGGG-------CCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCccccc-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEc
Confidence 36899987665433222111 222222221 1222345555566555568877653
No 454
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=88.86 E-value=4.5 Score=38.89 Aligned_cols=80 Identities=16% Similarity=0.077 Sum_probs=55.1
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.+.+||=.|++ |+.+..++..+- .+.+|++++.++..++.+.+.++..+. .+.++.+|+.+.... ..
T Consensus 21 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 21 DSEVALVTGAT-SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV--EADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp TSCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 36678877765 677777766543 345899999999988877777766553 377888998764211 12
Q ss_pred CCCCEEEEcCCCC
Q 009708 405 VKCDKVLLDAPCS 417 (528)
Q Consensus 405 ~~fD~Vl~D~Pcs 417 (528)
+.+|.++.++-..
T Consensus 98 g~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 98 GPVDVLVNNAGRP 110 (277)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999876543
No 455
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=88.86 E-value=2.7 Score=40.54 Aligned_cols=80 Identities=23% Similarity=0.179 Sum_probs=53.5
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCC----------------hHHHHHHHHHHHHcCCCccEEEEcCccc
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDIN----------------KGRLRILNETAKLHQVNSVIRTIHADLR 397 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s----------------~~~l~~~~~n~~~~g~~~~i~~~~~D~~ 397 (528)
.|.+||=.|++. +.+.+++..+- .+.+|+.+|.+ ++.++.+.+.++..+. .+.++..|+.
T Consensus 10 ~~k~~lVTGas~-gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~ 86 (286)
T 3uve_A 10 EGKVAFVTGAAR-GQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR--RIVTAEVDVR 86 (286)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC--CEEEEECCTT
T ss_pred CCCEEEEeCCCc-hHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC--ceEEEEcCCC
Confidence 466788887764 56666665542 35689999987 6777776666665553 4788899988
Q ss_pred ccccc---------CCCCCCEEEEcCCCC
Q 009708 398 TFADN---------STVKCDKVLLDAPCS 417 (528)
Q Consensus 398 ~~~~~---------~~~~fD~Vl~D~Pcs 417 (528)
+.... ..+..|.++.++-..
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 64321 014789999876543
No 456
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=88.86 E-value=2.2 Score=40.61 Aligned_cols=126 Identities=13% Similarity=-0.007 Sum_probs=73.3
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEE-cCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAI-DINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~av-D~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|++ |+.+.+++..+- .+.+|+.+ +.+....+.+.+.++..+.. +.++.+|+.+.... .
T Consensus 7 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAG-RDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS--ALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSC--CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc--eEEEEcCCCCHHHHHHHHHHHHHH
Confidence 36678877765 556666665542 34578777 78888888777777766543 67888998774321 0
Q ss_pred CCCCCEEEEcCCCC-CCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 404 TVKCDKVLLDAPCS-GLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcs-g~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
.+..|.++.++-.. ..+.+...+.-.|. ..+.-...-...+++.+...++++|.+|+.+.
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~---~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 144 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWH---QVLDVNLTSLFLTAKTALPKMAKGGAIVTFSS 144 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHH---HHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence 14689998876332 11222221111121 11111222234567777888877888886543
No 457
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=88.84 E-value=2.9 Score=39.34 Aligned_cols=79 Identities=14% Similarity=0.068 Sum_probs=56.3
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.+.+||=.|++ |+.+.++++.+- .+.+|+.+|.++..++.+.+.++..+. .+.++.+|+.+.... ..
T Consensus 8 ~~k~vlITGas-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSG-GGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG--TAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 36678877765 667777766553 346899999999999888888777653 478889998874321 01
Q ss_pred CCCCEEEEcCCC
Q 009708 405 VKCDKVLLDAPC 416 (528)
Q Consensus 405 ~~fD~Vl~D~Pc 416 (528)
+..|.++.++-.
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 378999987654
No 458
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=88.81 E-value=1.2 Score=45.23 Aligned_cols=96 Identities=15% Similarity=0.087 Sum_probs=57.9
Q ss_pred CCCCCeEEEeCC-c-cchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccCCCCCCEE
Q 009708 333 PQPGQSIVDCCA-A-PGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNSTVKCDKV 410 (528)
Q Consensus 333 ~~~g~~VLDl~a-G-~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~~~~fD~V 410 (528)
+++|++||=.|+ | .|..++++|+.+ +.+|++++ ++.+++.+ +.+|.+..+.....|..+.... ...+|+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~~~~~~~----~~lGa~~v~~~~~~~~~~~~~~-~~g~D~v 252 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQDASELV----RKLGADDVIDYKSGSVEEQLKS-LKPFDFI 252 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHH----HHTTCSEEEETTSSCHHHHHHT-SCCBSEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-ChHHHHHH----HHcCCCEEEECCchHHHHHHhh-cCCCCEE
Confidence 778999999983 3 455667777764 35899998 77776654 4567653221111121111111 1469988
Q ss_pred EEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEE
Q 009708 411 LLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVY 463 (528)
Q Consensus 411 l~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvy 463 (528)
|- |+|... ..+..+++.+++||+++.
T Consensus 253 id---~~g~~~------------------------~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 253 LD---NVGGST------------------------ETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp EE---SSCTTH------------------------HHHGGGGBCSSSCCEEEE
T ss_pred EE---CCCChh------------------------hhhHHHHHhhcCCcEEEE
Confidence 74 333111 125678899999999885
No 459
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=88.73 E-value=5.2 Score=37.06 Aligned_cols=80 Identities=18% Similarity=0.003 Sum_probs=54.1
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHH-HcCCCccEEEEcCcccccccc---C------C
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAK-LHQVNSVIRTIHADLRTFADN---S------T 404 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~-~~g~~~~i~~~~~D~~~~~~~---~------~ 404 (528)
+.+||=.|++ |+.+.++++.+- .+.+|+.++.++..++.+.+.+. ..+. .+.++.+|+.+.... . .
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV--EVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC--eEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 4567766754 667777776553 34589999999999888777665 4443 378889998774321 0 1
Q ss_pred CCCCEEEEcCCCCC
Q 009708 405 VKCDKVLLDAPCSG 418 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg 418 (528)
+..|.++.++-...
T Consensus 79 g~id~li~~Ag~~~ 92 (235)
T 3l77_A 79 GDVDVVVANAGLGY 92 (235)
T ss_dssp SSCSEEEECCCCCC
T ss_pred CCCCEEEECCcccc
Confidence 36899998765443
No 460
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=88.72 E-value=4.1 Score=39.65 Aligned_cols=80 Identities=15% Similarity=0.020 Sum_probs=54.7
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+.+..++..+- .+.+|+.++.++..++.+.+.++..+. .+.++.+|+.+.... ..
T Consensus 33 ~~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 33 KGKIALVTGAS-YGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI--NAHGYVCDVTDEDGIQAMVAQIESEV 109 (291)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 36678877764 677777776543 346899999999888877776666553 367788898764211 12
Q ss_pred CCCCEEEEcCCCC
Q 009708 405 VKCDKVLLDAPCS 417 (528)
Q Consensus 405 ~~fD~Vl~D~Pcs 417 (528)
+..|.++.++-..
T Consensus 110 g~iD~lvnnAg~~ 122 (291)
T 3cxt_A 110 GIIDILVNNAGII 122 (291)
T ss_dssp CCCCEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 4689999876543
No 461
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=88.71 E-value=2.2 Score=41.15 Aligned_cols=80 Identities=13% Similarity=0.162 Sum_probs=56.0
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC--------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--------TV 405 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~--------~~ 405 (528)
.|.+||=.|++ |+.+..++..+- .+.+|+.+|.++..++.+.+.+...+. .+.++.+|+.+..... .+
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 32 RGRTALVTGSS-RGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGG--TAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTC--CEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC--eEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 36678877755 667776666542 356899999999988888887777654 3788899987642210 14
Q ss_pred CCCEEEEcCCCC
Q 009708 406 KCDKVLLDAPCS 417 (528)
Q Consensus 406 ~fD~Vl~D~Pcs 417 (528)
..|.++.++-..
T Consensus 109 ~iD~lvnnAg~~ 120 (275)
T 4imr_A 109 PVDILVINASAQ 120 (275)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999876543
No 462
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=88.61 E-value=3.6 Score=39.73 Aligned_cols=78 Identities=17% Similarity=0.093 Sum_probs=51.2
Q ss_pred CCCeEEEeCCccchHHHHHHHHc-CCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCL-SGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~-~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+.+.+++..+ ..+.+|+.+|.++..++.+.+.+ +. .+.++.+|+.+.... ..
T Consensus 28 ~gk~vlVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 28 AGKVAIVTGAG-AGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GC--GAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TTCEEEETTTT-STHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CS--SCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC--cceEEEecCCCHHHHHHHHHHHHHHc
Confidence 36677777765 55666666544 23568999999998877665544 33 367888898774321 01
Q ss_pred CCCCEEEEcCCCCC
Q 009708 405 VKCDKVLLDAPCSG 418 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg 418 (528)
+..|.++.++-...
T Consensus 102 g~iD~lvnnAg~~~ 115 (277)
T 3gvc_A 102 GGVDKLVANAGVVH 115 (277)
T ss_dssp SSCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 46899998765543
No 463
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=88.54 E-value=3.7 Score=38.64 Aligned_cols=78 Identities=10% Similarity=0.069 Sum_probs=54.3
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC---------CC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS---------TV 405 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~---------~~ 405 (528)
+.+||=.|+ +|+.+.++++.+- .+.+|++++.++..++.+.+.++..+. .+.++.+|+.+..... .+
T Consensus 13 ~k~vlItGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 13 NRVAIVTGG-AQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH--DVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 567887775 4777877776553 346899999999888777776666553 3788899987643210 13
Q ss_pred CCCEEEEcCCC
Q 009708 406 KCDKVLLDAPC 416 (528)
Q Consensus 406 ~fD~Vl~D~Pc 416 (528)
.+|.|+.++-.
T Consensus 90 ~id~vi~~Ag~ 100 (260)
T 3awd_A 90 RVDILVACAGI 100 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987644
No 464
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=88.26 E-value=5.3 Score=37.71 Aligned_cols=80 Identities=19% Similarity=0.064 Sum_probs=53.6
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcc--ccccc---------c
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADL--RTFAD---------N 402 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~--~~~~~---------~ 402 (528)
.|.+||=.|++ |+.+..+++.+- .+.+|+.+|.++..++.+.+.+...+.. .+.++..|+ .+... .
T Consensus 11 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 11 NDRIILVTGAS-DGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR-QPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSC-CCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-CceEEEEecccCCHHHHHHHHHHHHH
Confidence 36678877765 566766666542 3568999999999988887777665433 266788888 44211 0
Q ss_pred CCCCCCEEEEcCCC
Q 009708 403 STVKCDKVLLDAPC 416 (528)
Q Consensus 403 ~~~~fD~Vl~D~Pc 416 (528)
..+..|.++.++-.
T Consensus 89 ~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 89 NYPRLDGVLHNAGL 102 (252)
T ss_dssp HCSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 12478999987654
No 465
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=88.18 E-value=4.6 Score=38.77 Aligned_cols=84 Identities=14% Similarity=0.027 Sum_probs=55.9
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCC------------hHHHHHHHHHHHHcCCCccEEEEcCccccccc
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDIN------------KGRLRILNETAKLHQVNSVIRTIHADLRTFAD 401 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s------------~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~ 401 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.+|.+ ...++.....++..+. .+.++..|+.+...
T Consensus 9 ~~k~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 9 EGKTALITGGA-RGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR--RCISAKVDVKDRAA 85 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCC--eEEEEeCCCCCHHH
Confidence 36688888865 566776666542 35689999987 6667766666666664 37888999877432
Q ss_pred c---------CCCCCCEEEEcCCCCCCcc
Q 009708 402 N---------STVKCDKVLLDAPCSGLGV 421 (528)
Q Consensus 402 ~---------~~~~fD~Vl~D~Pcsg~G~ 421 (528)
. ..+..|.++.++-.+..+.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 114 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGISTIAL 114 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCCCCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence 1 0147999998775544333
No 466
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=88.10 E-value=3.3 Score=39.37 Aligned_cols=79 Identities=19% Similarity=0.147 Sum_probs=54.1
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+.+.+++..+- .+.+|+.++.++..++.+.+.++..|. .+.++.+|+.+.... ..
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (262)
T 1zem_A 6 NGKVCLVTGAG-GNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV--EARSYVCDVTSEEAVIGTVDSVVRDF 82 (262)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 36678877765 567777766543 346899999999888877776665553 377888998764311 01
Q ss_pred CCCCEEEEcCCC
Q 009708 405 VKCDKVLLDAPC 416 (528)
Q Consensus 405 ~~fD~Vl~D~Pc 416 (528)
+.+|.++.++-.
T Consensus 83 g~id~lv~nAg~ 94 (262)
T 1zem_A 83 GKIDFLFNNAGY 94 (262)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999987654
No 467
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=88.05 E-value=4.3 Score=38.17 Aligned_cols=83 Identities=17% Similarity=0.030 Sum_probs=54.1
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcC-ChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~-s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
+.+||=.|+ +|+.+.+++..+- .+.+|+.++. ++..++.+.+.++..+.. +.++.+|+.+.... ..
T Consensus 4 ~k~~lVTGa-s~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 4 TKSALVTGA-SRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVD--SFAIQANVADADEVKAMIKEVVSQF 80 (246)
T ss_dssp SCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSC--EEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc--EEEEEccCCCHHHHHHHHHHHHHHc
Confidence 456666565 4677777776543 3457888776 667777777777776643 77888998764321 01
Q ss_pred CCCCEEEEcCCCCCCcc
Q 009708 405 VKCDKVLLDAPCSGLGV 421 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~ 421 (528)
+..|.++.++-....+.
T Consensus 81 g~id~lv~nAg~~~~~~ 97 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNL 97 (246)
T ss_dssp SCCCEEEECCCCCCCCC
T ss_pred CCCCEEEECCCCCCCCC
Confidence 47899998876544333
No 468
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=88.04 E-value=0.81 Score=43.98 Aligned_cols=124 Identities=11% Similarity=0.093 Sum_probs=69.7
Q ss_pred CCCeEEEeCC-ccchHHHHHHHHcC-CCcEEEEEcCChHH-HHHHHHHHHHcCCCccEEEEcCcccccccc---------
Q 009708 335 PGQSIVDCCA-APGGKTLYMASCLS-GQGLVYAIDINKGR-LRILNETAKLHQVNSVIRTIHADLRTFADN--------- 402 (528)
Q Consensus 335 ~g~~VLDl~a-G~G~kt~~la~~~~-~~~~v~avD~s~~~-l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~--------- 402 (528)
.|.+||=.|+ |+|+.+..++..+. .+.+|+.++.++.. ++.+. +..+ ..+.++.+|+.+....
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT---DRLP--AKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH---TTSS--SCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH---HhcC--CCceEEEccCCCHHHHHHHHHHHHH
Confidence 3678898898 48888888877553 34689999998765 23332 2223 2366788888764211
Q ss_pred CCC---CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHH----HHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 403 STV---KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEEL----KILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 403 ~~~---~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
..+ .+|.++.++-..........| ....+.++.... ..-...+++.+...++++|.+|+.+
T Consensus 81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMPQTGMGINP--FFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 148 (269)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSC--GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HhCCCCCceEEEECCccCccccccccc--cccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence 012 789999876432200000000 011233333222 2223346777788877788888654
No 469
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=87.98 E-value=4.7 Score=38.16 Aligned_cols=78 Identities=8% Similarity=-0.038 Sum_probs=53.6
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc----------CC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN----------ST 404 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~----------~~ 404 (528)
+.+||=.|+ +|+.+.++++.+- .+.+|++++.++..++.+.+.++..+. .+.++.+|+.+.... ..
T Consensus 14 ~k~vlITGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 14 AKTVLVTGG-TKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF--QVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 567776665 6777877776553 345899999999888877776666553 377888898764211 01
Q ss_pred CCCCEEEEcCCC
Q 009708 405 VKCDKVLLDAPC 416 (528)
Q Consensus 405 ~~fD~Vl~D~Pc 416 (528)
+.+|.|+.++-.
T Consensus 91 ~~id~li~~Ag~ 102 (266)
T 1xq1_A 91 GKLDILINNLGA 102 (266)
T ss_dssp TCCSEEEEECCC
T ss_pred CCCcEEEECCCC
Confidence 578999987654
No 470
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=87.93 E-value=4 Score=39.78 Aligned_cols=81 Identities=19% Similarity=0.142 Sum_probs=55.0
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCC-ccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVN-SVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~-~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|+ +|+.+..+++.+- .+.+|+.++.++..++.+.+.+...+.. ..+.++.+|+.+.... .
T Consensus 25 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITGS-SNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 3567776665 5677777776553 3468999999999888777777665531 1478888998764321 0
Q ss_pred CCCCCEEEEcCCC
Q 009708 404 TVKCDKVLLDAPC 416 (528)
Q Consensus 404 ~~~fD~Vl~D~Pc 416 (528)
.+.+|.++.++-.
T Consensus 104 ~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 104 FGKIDILVNNAGA 116 (297)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1468999987654
No 471
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=87.92 E-value=4.7 Score=38.60 Aligned_cols=83 Identities=12% Similarity=-0.039 Sum_probs=55.7
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcC-ChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~-s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|++ |+.+.+++..+- .+.+|+.++. ++..++.+.+.++..+. .+.++.+|+.+.... .
T Consensus 27 ~~k~vlVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 27 TDRIALVTGAS-RGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG--EAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36677777755 667777666543 3458888888 77788877777777654 377888998874321 0
Q ss_pred CCCCCEEEEcCCCCCCc
Q 009708 404 TVKCDKVLLDAPCSGLG 420 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg~G 420 (528)
.+..|.++.++-....+
T Consensus 104 ~g~id~lv~nAg~~~~~ 120 (269)
T 4dmm_A 104 WGRLDVLVNNAGITRDT 120 (269)
T ss_dssp HSCCCEEEECCCCCCCC
T ss_pred cCCCCEEEECCCCCCCC
Confidence 14789999887554433
No 472
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=87.85 E-value=6.5 Score=37.92 Aligned_cols=79 Identities=15% Similarity=0.032 Sum_probs=53.6
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHc-CCCccEEEEcCcccccccc---------CC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~-g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
|.+||=.|+ +|+.+.+++..+- .+.+|++++.++..++.+.+.+... +. .+.++.+|+.+.... ..
T Consensus 26 ~k~vlITGa-sggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 26 GKVAFITGG-GTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN--KVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--ceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 567877775 4677777776553 3468999999998887766665543 42 378889998764210 12
Q ss_pred CCCCEEEEcCCCC
Q 009708 405 VKCDKVLLDAPCS 417 (528)
Q Consensus 405 ~~fD~Vl~D~Pcs 417 (528)
+.+|.|+.++-..
T Consensus 103 g~id~li~~Ag~~ 115 (302)
T 1w6u_A 103 GHPNIVINNAAGN 115 (302)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999876543
No 473
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=87.81 E-value=4.4 Score=37.91 Aligned_cols=79 Identities=16% Similarity=0.073 Sum_probs=54.9
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC---------CC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS---------TV 405 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~---------~~ 405 (528)
+.+||=.| |+|+.+.++++.+- .+.+|++++.++..++.+.+.++..+. .+.++.+|+.+..... .+
T Consensus 11 ~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 11 GKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG--QAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC--ceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 56777666 46788888877653 345899999999888877777766553 3778889987643210 13
Q ss_pred CCCEEEEcCCCC
Q 009708 406 KCDKVLLDAPCS 417 (528)
Q Consensus 406 ~fD~Vl~D~Pcs 417 (528)
.+|.|+.++-..
T Consensus 88 ~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 88 KVDILVNNAGGG 99 (255)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876543
No 474
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=87.80 E-value=0.28 Score=49.41 Aligned_cols=95 Identities=12% Similarity=-0.032 Sum_probs=53.9
Q ss_pred CCC-CeEEEeCCccch---HHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC--CCCC
Q 009708 334 QPG-QSIVDCCAAPGG---KTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--TVKC 407 (528)
Q Consensus 334 ~~g-~~VLDl~aG~G~---kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~--~~~f 407 (528)
++| ++|| +..|+|+ .++++|+.+ +.+|+++|.++++++.++ .+|.+..+.....|........ ...+
T Consensus 162 ~~g~~~vl-i~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~----~~Ga~~~~~~~~~~~~~~v~~~~~~~g~ 234 (349)
T 3pi7_A 162 QEGEKAFV-MTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLK----DIGAAHVLNEKAPDFEATLREVMKAEQP 234 (349)
T ss_dssp HHCCSEEE-ESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHH----HHTCSEEEETTSTTHHHHHHHHHHHHCC
T ss_pred hCCCCEEE-EeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----HcCCCEEEECCcHHHHHHHHHHhcCCCC
Confidence 456 4555 4444444 445566554 359999999999988775 4576532211111211111100 1369
Q ss_pred CEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 408 DKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 408 D~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
|+|+- |.|.. .+..+++.|++||+++..
T Consensus 235 D~vid---~~g~~--------------------------~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 235 RIFLD---AVTGP--------------------------LASAIFNAMPKRARWIIY 262 (349)
T ss_dssp CEEEE---SSCHH--------------------------HHHHHHHHSCTTCEEEEC
T ss_pred cEEEE---CCCCh--------------------------hHHHHHhhhcCCCEEEEE
Confidence 98874 43311 145678889999999864
No 475
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=87.79 E-value=4.9 Score=38.10 Aligned_cols=79 Identities=18% Similarity=0.127 Sum_probs=53.1
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHc-CCCccEEEEcCcccccccc---------CC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLH-QVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~-g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
|.+||=.|++ |+.+.++++.+- .+.+|++++.++..++.+.+.+... +. .+.++.+|+.+.... ..
T Consensus 7 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 7 GKVAVITGSS-SGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV--RVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC--ceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5677877755 667777776543 3458999999998887766655543 43 377888998764311 01
Q ss_pred CCCCEEEEcCCCC
Q 009708 405 VKCDKVLLDAPCS 417 (528)
Q Consensus 405 ~~fD~Vl~D~Pcs 417 (528)
+..|.++.++-..
T Consensus 84 g~id~lv~~Ag~~ 96 (263)
T 3ai3_A 84 GGADILVNNAGTG 96 (263)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999876543
No 476
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=87.67 E-value=5.1 Score=38.54 Aligned_cols=80 Identities=13% Similarity=0.029 Sum_probs=55.2
Q ss_pred CCeEEEeCCccchHHHHHHHHcCC-CcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLSG-QGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 405 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~~-~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~~ 405 (528)
+.+||=.|++ |+.+..++..+-. +.+|++++.++..++.+.+.++..+. .+.++.+|+.+.... ..+
T Consensus 44 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 44 NKVALVTGAG-RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY--ESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp SCEEEEESTT-SHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC--CEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC--ceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5678877755 7788888876643 45899999998888777666665543 377888998764221 124
Q ss_pred CCCEEEEcCCCCC
Q 009708 406 KCDKVLLDAPCSG 418 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg 418 (528)
.+|.|+.++-...
T Consensus 121 ~id~li~~Ag~~~ 133 (285)
T 2c07_A 121 NVDILVNNAGITR 133 (285)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899998765443
No 477
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=87.66 E-value=3.6 Score=38.78 Aligned_cols=79 Identities=16% Similarity=0.048 Sum_probs=53.2
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcC-ChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~-s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
+.+||=.|+ +|+.+.+++..+- .+.+|++++. ++..++.+.+.++..+. .+.++.+|+.+.... ..
T Consensus 7 ~k~vlITGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 7 GKVVVITGS-STGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG--EAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 567776665 5777877776542 3468999999 88877777666665543 477888998764311 01
Q ss_pred CCCCEEEEcCCCC
Q 009708 405 VKCDKVLLDAPCS 417 (528)
Q Consensus 405 ~~fD~Vl~D~Pcs 417 (528)
+.+|.|+.++-..
T Consensus 84 g~id~li~~Ag~~ 96 (261)
T 1gee_A 84 GKLDVMINNAGLE 96 (261)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999876543
No 478
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=87.61 E-value=4.8 Score=38.74 Aligned_cols=121 Identities=12% Similarity=0.078 Sum_probs=68.0
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 405 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~~ 405 (528)
|.+||=.|++ |+.+.+++..+- .+.+|+.+|.++..++.+.+. .+. .+.++..|+.+.... ..+
T Consensus 27 ~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 27 QRVCIVTGGG-SGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IGS--KAFGVRVDVSSAKDAESMVEKTTAKWG 100 (277)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH---HCT--TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCC--ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 6678877765 566776666542 346899999998877665543 332 377888998764321 014
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcC--CCEEEEEc
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKP--GGVLVYST 465 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~Lkp--GG~LvysT 465 (528)
..|.++.++-....+.+...+.-.|. ..+.....-...+++.+...++. +|.+|+.+
T Consensus 101 ~iD~lv~nAg~~~~~~~~~~~~~~~~---~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~is 159 (277)
T 4dqx_A 101 RVDVLVNNAGFGTTGNVVTIPEETWD---RIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTT 159 (277)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHH---HHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEEC
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHH---HHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEC
Confidence 78999987765443333322222221 01111111222345555555543 56777654
No 479
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=87.61 E-value=5.7 Score=37.72 Aligned_cols=80 Identities=14% Similarity=0.057 Sum_probs=53.4
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 405 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~~ 405 (528)
|.+||=.|++ |+.+.+++..+- .+.+|+.++.++..++.+.+.+........+.++.+|+.+.... ..+
T Consensus 13 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 13 DRVVLITGGG-SGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 6678877764 677777766543 34689999999988887766665541112377888998764321 013
Q ss_pred CCCEEEEcCCC
Q 009708 406 KCDKVLLDAPC 416 (528)
Q Consensus 406 ~fD~Vl~D~Pc 416 (528)
.+|.++.++-.
T Consensus 92 ~id~lv~nAg~ 102 (267)
T 1iy8_A 92 RIDGFFNNAGI 102 (267)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999987644
No 480
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=87.53 E-value=3.3 Score=39.56 Aligned_cols=118 Identities=17% Similarity=0.062 Sum_probs=66.4
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CCC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------STV 405 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~~ 405 (528)
+.+||=.|++ |+.+.++++.+- .+.+|+.++.++..++.+.+ ..+ ..+.++.+|+.+.... ..+
T Consensus 6 ~k~vlITGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 6 GKTILVTGAA-SGIGRAALDLFAREGASLVAVDREERLLAEAVA---ALE--AEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---TCC--SSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hhc--CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5677777764 667777766543 34589999999887665443 222 3477888998764311 014
Q ss_pred CCCEEEEcCCCCCCccccCCchhhccCCHHHHHHH----HHHHHHHHHHHhccCcCCCEEEEEcC
Q 009708 406 KCDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEEL----KILQDELLDAASLLVKPGGVLVYSTC 466 (528)
Q Consensus 406 ~fD~Vl~D~Pcsg~G~~~~~pd~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpGG~LvysTc 466 (528)
..|.++.++-....+.+.. .+.++.... ..-...+++.+...++.+|.+|+.+.
T Consensus 80 ~iD~lvnnAg~~~~~~~~~-------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 137 (263)
T 2a4k_A 80 RLHGVAHFAGVAHSALSWN-------LPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGS 137 (263)
T ss_dssp CCCEEEEGGGGTTTTC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCcEEEECCCCCCCCChhh-------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEec
Confidence 6899998765433222211 222222221 11223345556665554788876543
No 481
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=87.43 E-value=3.1 Score=39.40 Aligned_cols=85 Identities=14% Similarity=0.012 Sum_probs=56.4
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCC-ccEEEEcCcccccccc---------CC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVN-SVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~-~~i~~~~~D~~~~~~~---------~~ 404 (528)
+.++|=.|++ |+.+..+++.+- .+.+|+.++.++..++.+.+.+...+-. ..+.++.+|+.+.... ..
T Consensus 7 ~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 7 KGLAIITGAS-QGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCEEEEESTT-SHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 5677877766 566666665442 2468999999999998888777665221 2477888998874321 01
Q ss_pred CCCCEEEEcCCCCCCcc
Q 009708 405 VKCDKVLLDAPCSGLGV 421 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G~ 421 (528)
+..|.++.++-....+.
T Consensus 86 g~iD~lvnnAg~~~~~~ 102 (250)
T 3nyw_A 86 GAVDILVNAAAMFMDGS 102 (250)
T ss_dssp CCEEEEEECCCCCCCCC
T ss_pred CCCCEEEECCCcCCCCC
Confidence 46899998765544333
No 482
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=87.38 E-value=2.5 Score=40.89 Aligned_cols=80 Identities=15% Similarity=0.058 Sum_probs=54.2
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.+|.++..++.+.+.+...+-. .+.++.+|+.+.... ..
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 32 EGRIALVTGGG-TGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN-IVRAVVCDVGDPDQVAALFAAVRAEF 109 (281)
T ss_dssp --CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 36677777755 677777776552 3568999999999988877777655433 357888998774321 02
Q ss_pred CCCCEEEEcCCC
Q 009708 405 VKCDKVLLDAPC 416 (528)
Q Consensus 405 ~~fD~Vl~D~Pc 416 (528)
+..|.++.++-.
T Consensus 110 g~iD~lvnnAG~ 121 (281)
T 4dry_A 110 ARLDLLVNNAGS 121 (281)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999987654
No 483
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=87.29 E-value=2.8 Score=40.48 Aligned_cols=79 Identities=13% Similarity=0.030 Sum_probs=53.9
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcC-ChHHHHHHHHHHHHcCCCccEEEEcCccccccccC---------
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS--------- 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~-s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~--------- 403 (528)
.+.+||=.|++ |+.+.++++.+- .+.+|+.+|. ++..++.+.+.+...|. .+.++.+|+.+.....
T Consensus 28 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 28 ARPVAIVTGGR-RGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA--RVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTC--CEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCCEEEEecCC-CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 46678877765 566666665542 3468999985 78888877777776664 3788999998753210
Q ss_pred CCCCCEEEEcCCC
Q 009708 404 TVKCDKVLLDAPC 416 (528)
Q Consensus 404 ~~~fD~Vl~D~Pc 416 (528)
.+..|.++.++-.
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 1478999987654
No 484
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=87.03 E-value=2.5 Score=40.95 Aligned_cols=79 Identities=15% Similarity=0.009 Sum_probs=54.5
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+.+..++..+- .+.+|+.+|.++..++.+.+.+...+. .+.++.+|+.+.... ..
T Consensus 7 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 7 EGKIAIVTGAS-SGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGG--EAAALAGDVGDEALHEALVELAVRRF 83 (280)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTC--CEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 36677777765 566766665542 356899999999998887777655443 478889998874321 01
Q ss_pred CCCCEEEEcCCC
Q 009708 405 VKCDKVLLDAPC 416 (528)
Q Consensus 405 ~~fD~Vl~D~Pc 416 (528)
+..|.++.++-.
T Consensus 84 g~iD~lvnnAg~ 95 (280)
T 3tox_A 84 GGLDTAFNNAGA 95 (280)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999987654
No 485
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=86.89 E-value=3.4 Score=38.50 Aligned_cols=78 Identities=15% Similarity=0.098 Sum_probs=51.9
Q ss_pred CCeEEEeCCccchHHHHHHHHcCC-Cc-------EEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc-----
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLSG-QG-------LVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN----- 402 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~~-~~-------~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~----- 402 (528)
+.+||=.|+ +|+.+.+++..+-. +. +|++++.++..++.+...+...+ ..+.++.+|+.+....
T Consensus 2 ~k~vlITGa-sggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~ 78 (244)
T 2bd0_A 2 KHILLITGA-GKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG--ALTDTITADISDMADVRRLTT 78 (244)
T ss_dssp CEEEEEETT-TSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT--CEEEEEECCTTSHHHHHHHHH
T ss_pred CCEEEEECC-CChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC--CeeeEEEecCCCHHHHHHHHH
Confidence 345665664 57777777765432 23 79999999988887776665544 2478889998764211
Q ss_pred ----CCCCCCEEEEcCCC
Q 009708 403 ----STVKCDKVLLDAPC 416 (528)
Q Consensus 403 ----~~~~fD~Vl~D~Pc 416 (528)
..+.+|.|+.++-.
T Consensus 79 ~~~~~~g~id~li~~Ag~ 96 (244)
T 2bd0_A 79 HIVERYGHIDCLVNNAGV 96 (244)
T ss_dssp HHHHHTSCCSEEEECCCC
T ss_pred HHHHhCCCCCEEEEcCCc
Confidence 02468999987644
No 486
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=86.64 E-value=4.1 Score=39.15 Aligned_cols=82 Identities=15% Similarity=0.093 Sum_probs=54.6
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCC-ccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVN-SVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~-~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|+ +|+.+.+++..+- .+.+|+.++.++..++.+.+.+...+.. ..+.++.+|+.+.... .
T Consensus 5 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 5 SNKTVIITGS-SNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 3567777775 4667777766543 3468999999999888777666654431 1478889998764311 0
Q ss_pred CCCCCEEEEcCCCC
Q 009708 404 TVKCDKVLLDAPCS 417 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcs 417 (528)
.+.+|.++.++-..
T Consensus 84 ~g~iD~lv~nAg~~ 97 (280)
T 1xkq_A 84 FGKIDVLVNNAGAA 97 (280)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 14689999876543
No 487
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=86.63 E-value=5.5 Score=37.33 Aligned_cols=79 Identities=16% Similarity=0.062 Sum_probs=53.2
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcC-ChHHHHHHHHHHHHcCCCccEEEEcCccccccccC---------C
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS---------T 404 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~-s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~---------~ 404 (528)
|.+||=.|+ +|+.+.++++.+- .+.+|+.++. ++..++.+.+.++..+. .+.++.+|+.+..... .
T Consensus 4 ~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 4 GKVALVTGA-SRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS--DAIAVRADVANAEDVTNMVKQTVDVF 80 (246)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 556776664 5777777776553 3458999998 88888777776666553 3778888987643210 1
Q ss_pred CCCCEEEEcCCCC
Q 009708 405 VKCDKVLLDAPCS 417 (528)
Q Consensus 405 ~~fD~Vl~D~Pcs 417 (528)
+..|.++.++-..
T Consensus 81 g~id~lv~nAg~~ 93 (246)
T 2uvd_A 81 GQVDILVNNAGVT 93 (246)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999876543
No 488
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=86.59 E-value=1.8 Score=41.32 Aligned_cols=120 Identities=14% Similarity=0.013 Sum_probs=67.9
Q ss_pred CCeEEEeCCc-cchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC---------C
Q 009708 336 GQSIVDCCAA-PGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS---------T 404 (528)
Q Consensus 336 g~~VLDl~aG-~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~---------~ 404 (528)
+.+||=.|++ +|+.+.++++.+- .+.+|+.++.++..-+.+++..+..+ . +.++.+|+.+..... .
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~-~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG--G-ALLFRADVTQDEELDALFAGVKEAF 84 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT--C-CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--C-cEEEECCCCCHHHHHHHHHHHHHHc
Confidence 6688888886 3777877776542 24689999998762223333323333 2 567888987643210 1
Q ss_pred CCCCEEEEcCCCCCC----ccccCCchhhccCCHHHHHHH----HHHHHHHHHHHhccCcCCCEEEEEc
Q 009708 405 VKCDKVLLDAPCSGL----GVLSKRADLRWNRRLEDMEEL----KILQDELLDAASLLVKPGGVLVYST 465 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~----G~~~~~pd~~~~~~~~~~~~l----~~~q~~lL~~a~~~LkpGG~LvysT 465 (528)
+..|.++.++-.... +.+. ..+.++.... ..-...+++.+...++.+|++|+.+
T Consensus 85 g~iD~lv~~Ag~~~~~~~~~~~~-------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 146 (261)
T 2wyu_A 85 GGLDYLVHAIAFAPREAMEGRYI-------DTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLT 146 (261)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGG-------GCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCcccCCCCcc-------cCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 368999987654321 1111 1222332222 1223346677777776678888654
No 489
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=86.46 E-value=4.4 Score=38.18 Aligned_cols=78 Identities=22% Similarity=0.148 Sum_probs=52.0
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|++ |+.+..+++.+- .+.+|+.+|.++..++.+...+ +. .+.++.+|+.+.... ..
T Consensus 5 ~gk~vlVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 5 AGKTALVTGAA-QGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GK--KARAIAADISDPGSVKALFAEIQALT 78 (247)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CT--TEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC--ceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 36678877765 566766666542 3568999999998877665443 32 478889998764321 01
Q ss_pred CCCCEEEEcCCCCC
Q 009708 405 VKCDKVLLDAPCSG 418 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg 418 (528)
+..|.++.++-...
T Consensus 79 g~id~lv~nAg~~~ 92 (247)
T 3rwb_A 79 GGIDILVNNASIVP 92 (247)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 46899998765543
No 490
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=86.31 E-value=5.9 Score=38.02 Aligned_cols=79 Identities=9% Similarity=-0.071 Sum_probs=53.7
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHH-cCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKL-HQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~-~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|++ |+.+.++++.+- .+.+|+.++.+...++.+...+.. .+. .+.++.+|+.+.... .
T Consensus 26 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 26 RDKVAFITGGG-SGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGR--RCLPLSMDVRAPPAVMAAVDQALKE 102 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSS--CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 36678877765 567777776553 345899999999887766665543 343 378889998764221 0
Q ss_pred CCCCCEEEEcCCC
Q 009708 404 TVKCDKVLLDAPC 416 (528)
Q Consensus 404 ~~~fD~Vl~D~Pc 416 (528)
.+..|.++.++-.
T Consensus 103 ~g~id~lv~nAg~ 115 (277)
T 4fc7_A 103 FGRIDILINCAAG 115 (277)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCcC
Confidence 1478999987654
No 491
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=86.30 E-value=6.2 Score=38.14 Aligned_cols=80 Identities=13% Similarity=0.049 Sum_probs=54.2
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcC---CCccEEEEcCccccccccC--------
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQ---VNSVIRTIHADLRTFADNS-------- 403 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g---~~~~i~~~~~D~~~~~~~~-------- 403 (528)
+.+||=.|+ +|+.+.+++..+- .+.+|+.++.++..++.+.+.++... ....+.++.+|+.+.....
T Consensus 18 ~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 18 GQVAIVTGG-ATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 567887775 5777877776553 34689999999988887777665521 1124788999987643210
Q ss_pred -CCCCCEEEEcCCC
Q 009708 404 -TVKCDKVLLDAPC 416 (528)
Q Consensus 404 -~~~fD~Vl~D~Pc 416 (528)
.+.+|.|+.++-.
T Consensus 97 ~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 97 TFGKINFLVNNGGG 110 (303)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 1368999987654
No 492
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=86.23 E-value=4.8 Score=38.80 Aligned_cols=83 Identities=12% Similarity=0.065 Sum_probs=54.9
Q ss_pred CCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcC-ChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~-s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
+.+||=.|++ |+.+.+++..+- .+.+|+.+|. ++..++.+.+.++...- ..+.++.+|+.+.... ..
T Consensus 25 ~k~~lVTGas-~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 25 TKTAVITGST-SGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS-GTVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCS-SCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccC-CcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 6678888865 566776666542 3468999998 67777777666655422 2478899998764321 12
Q ss_pred CCCCEEEEcCCCCCCc
Q 009708 405 VKCDKVLLDAPCSGLG 420 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg~G 420 (528)
+..|.++.++-....+
T Consensus 103 g~iD~lv~nAg~~~~~ 118 (281)
T 3v2h_A 103 GGADILVNNAGVQFVE 118 (281)
T ss_dssp SSCSEEEECCCCCCCC
T ss_pred CCCCEEEECCCCCCCC
Confidence 4789999877654433
No 493
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=86.11 E-value=5.5 Score=40.49 Aligned_cols=97 Identities=14% Similarity=0.146 Sum_probs=67.3
Q ss_pred CCCeEEEeCCccchHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCcc-EEEEcCccccccccCCCCCCEEEEc
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNSV-IRTIHADLRTFADNSTVKCDKVLLD 413 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~~-i~~~~~D~~~~~~~~~~~fD~Vl~D 413 (528)
.+..||.++.+-|..++.++.. .++.+.=|--....++.|++++|+++. +++... .. .....||.|++-
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~---~~~~~~~~v~~~ 107 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLDS--TA---DYPQQPGVVLIK 107 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--TS---CCCSSCSEEEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--cc---ccccCCCEEEEE
Confidence 4568999999999999988743 345553366666789999999999752 444321 11 224679999987
Q ss_pred CCCCCCccccCCchhhccCCHHHHHHHHHHHHHHHHHHhccCcCCCEEEEE
Q 009708 414 APCSGLGVLSKRADLRWNRRLEDMEELKILQDELLDAASLLVKPGGVLVYS 464 (528)
Q Consensus 414 ~Pcsg~G~~~~~pd~~~~~~~~~~~~l~~~q~~lL~~a~~~LkpGG~Lvys 464 (528)
.|-+ ...+ ...|..+...|++|+.|+..
T Consensus 108 lpk~----------------~~~l-------~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 108 VPKT----------------LALL-------EQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp CCSC----------------HHHH-------HHHHHHHHTTCCTTSEEEEE
T ss_pred cCCC----------------HHHH-------HHHHHHHHhhCCCCCEEEEE
Confidence 7752 1222 23488889999999988643
No 494
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=86.06 E-value=5.2 Score=37.46 Aligned_cols=79 Identities=18% Similarity=0.122 Sum_probs=51.2
Q ss_pred CCCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc-----CCCCC
Q 009708 334 QPGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN-----STVKC 407 (528)
Q Consensus 334 ~~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~-----~~~~f 407 (528)
.++.+||=.|++ |+.+.+++..+- .+.+|+.++.++..++.+.+.+. ..+.++.+|..+.... .....
T Consensus 12 ~~~k~vlVTGas-~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~i 85 (249)
T 3f9i_A 12 LTGKTSLITGAS-SGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-----DNYTIEVCNLANKEECSNLISKTSNL 85 (249)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHHHHHHHTCSCC
T ss_pred CCCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-----cCccEEEcCCCCHHHHHHHHHhcCCC
Confidence 346678877765 667777766543 34689999999988877655442 2477888888764321 12468
Q ss_pred CEEEEcCCCCC
Q 009708 408 DKVLLDAPCSG 418 (528)
Q Consensus 408 D~Vl~D~Pcsg 418 (528)
|.++.++-...
T Consensus 86 d~li~~Ag~~~ 96 (249)
T 3f9i_A 86 DILVCNAGITS 96 (249)
T ss_dssp SEEEECCC---
T ss_pred CEEEECCCCCC
Confidence 99998776543
No 495
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=85.87 E-value=1.2 Score=44.79 Aligned_cols=52 Identities=13% Similarity=0.240 Sum_probs=37.9
Q ss_pred cCCCCCCeEEEeCCcc-chHHHHHHHHcCCCcEEEEEcCChHHHHHHHHHHHHcCCCc
Q 009708 331 VDPQPGQSIVDCCAAP-GGKTLYMASCLSGQGLVYAIDINKGRLRILNETAKLHQVNS 387 (528)
Q Consensus 331 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~~~v~avD~s~~~l~~~~~n~~~~g~~~ 387 (528)
.++++|++||=.|+|+ |..++++|+.+. +.+|+++|.++++++.++ .+|.+.
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~-Ga~Vi~~~~~~~~~~~~~----~lGa~~ 234 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMT-PATVIALDVKEEKLKLAE----RLGADH 234 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESSHHHHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEeCCHHHHHHHH----HhCCCE
Confidence 5788999999999853 334556666641 248999999999988764 467653
No 496
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=85.85 E-value=3.9 Score=39.05 Aligned_cols=81 Identities=16% Similarity=0.034 Sum_probs=54.7
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcC-ChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDI-NKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~-s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~ 403 (528)
.|.+||=.|++ |+.+.+++..+- .+.+|+.++. ++...+.+.+.++..+.. +.++..|+.+.... .
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 28 TGKNVLITGAS-KGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYK--AAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp SCCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC--EEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc--eEEEECCCCCHHHHHHHHHHHHHh
Confidence 36678777765 566766666542 3458999888 677777777777776643 78889998764321 0
Q ss_pred CCCCCEEEEcCCCCC
Q 009708 404 TVKCDKVLLDAPCSG 418 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcsg 418 (528)
.+..|.++.++-...
T Consensus 105 ~g~id~li~nAg~~~ 119 (271)
T 4iin_A 105 DGGLSYLVNNAGVVR 119 (271)
T ss_dssp HSSCCEEEECCCCCC
T ss_pred cCCCCEEEECCCcCC
Confidence 247899998765543
No 497
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=85.84 E-value=3.9 Score=39.40 Aligned_cols=80 Identities=16% Similarity=0.063 Sum_probs=53.8
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.+.+||=.|++ |+.+..+++.+- .+.+|+.+|.++..++.+.+.+...+ .+.++.+|+.+.... ..
T Consensus 28 ~~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 28 AGRIALVTGGS-RGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG---DCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS---CEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---ceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 36678877764 677777766543 34689999999988876666554433 377888998764211 12
Q ss_pred CCCCEEEEcCCCCC
Q 009708 405 VKCDKVLLDAPCSG 418 (528)
Q Consensus 405 ~~fD~Vl~D~Pcsg 418 (528)
+..|.++.++-...
T Consensus 104 g~iD~lvnnAg~~~ 117 (276)
T 2b4q_A 104 ARLDILVNNAGTSW 117 (276)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 47899998765433
No 498
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=85.69 E-value=7.6 Score=36.63 Aligned_cols=79 Identities=11% Similarity=0.048 Sum_probs=53.4
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCcccccccc---------CC
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADN---------ST 404 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~---------~~ 404 (528)
.|.+||=.|+ +|+.+.+++..+- .+.+|+.++.++..++.+.+.++..+. .+.++.+|+.+.... ..
T Consensus 13 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 13 ENKVALVTAS-TDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL--SVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3567776665 5677777776543 345899999999888777766666553 367788888764211 01
Q ss_pred CCCCEEEEcCCC
Q 009708 405 VKCDKVLLDAPC 416 (528)
Q Consensus 405 ~~fD~Vl~D~Pc 416 (528)
+..|.++.++-.
T Consensus 90 g~iD~lv~~Ag~ 101 (260)
T 2zat_A 90 GGVDILVSNAAV 101 (260)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999987654
No 499
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=85.68 E-value=4.5 Score=38.25 Aligned_cols=77 Identities=22% Similarity=0.210 Sum_probs=50.5
Q ss_pred CCeEEEeCCccchHHHHHHHHcCC-C---cEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccccccC--------
Q 009708 336 GQSIVDCCAAPGGKTLYMASCLSG-Q---GLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTFADNS-------- 403 (528)
Q Consensus 336 g~~VLDl~aG~G~kt~~la~~~~~-~---~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~~~~~-------- 403 (528)
+.+||=.|+ +|+.+.++++.+-. + .+|++++.++..++.+++..+. + ..+.++.+|+.+.....
T Consensus 21 ~k~vlITGa-sggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~-~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 96 (267)
T 1sny_A 21 MNSILITGC-NRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-H--SNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp CSEEEESCC-SSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH-C--TTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred CCEEEEECC-CCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhcc-C--CceEEEEecCCChHHHHHHHHHHHH
Confidence 557777765 57888888876643 3 5899999988766655443333 2 24788899987643210
Q ss_pred -CC--CCCEEEEcCCC
Q 009708 404 -TV--KCDKVLLDAPC 416 (528)
Q Consensus 404 -~~--~fD~Vl~D~Pc 416 (528)
.+ .+|.|+.++-.
T Consensus 97 ~~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGI 112 (267)
T ss_dssp HHGGGCCSEEEECCCC
T ss_pred hcCCCCccEEEECCCc
Confidence 01 68999987644
No 500
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=85.64 E-value=3.9 Score=39.42 Aligned_cols=81 Identities=15% Similarity=-0.025 Sum_probs=56.9
Q ss_pred CCCeEEEeCCccchHHHHHHHHcC-CCcEEEEEcCChHHHHHHHHHHHHcCCCccEEEEcCccccc-ccc---------C
Q 009708 335 PGQSIVDCCAAPGGKTLYMASCLS-GQGLVYAIDINKGRLRILNETAKLHQVNSVIRTIHADLRTF-ADN---------S 403 (528)
Q Consensus 335 ~g~~VLDl~aG~G~kt~~la~~~~-~~~~v~avD~s~~~l~~~~~n~~~~g~~~~i~~~~~D~~~~-~~~---------~ 403 (528)
.+.+||=.|++ ||++.+++..+- .+.+|+.++.++..++.+.+.++..+-. .+.++..|+.+. ... .
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE-NVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC-SEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 35677766655 677777776552 3568999999999988887777766544 488899999875 210 0
Q ss_pred CCCCCEEEEcCCCC
Q 009708 404 TVKCDKVLLDAPCS 417 (528)
Q Consensus 404 ~~~fD~Vl~D~Pcs 417 (528)
.+..|.++.++-..
T Consensus 89 ~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 89 FGKLDILVNNAGVA 102 (311)
T ss_dssp HSSCCEEEECCCCC
T ss_pred CCCCCEEEECCccc
Confidence 24799999876554
Done!