BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009712
(528 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359481017|ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis vinifera]
Length = 931
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 258/550 (46%), Positives = 342/550 (62%), Gaps = 50/550 (9%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+ +L SM E ENS+ L EVYKRS+D+C QLYEKELL+++SYL+ YGLQGA NAQQL
Sbjct: 410 MRTQLLSMA-ELENSNALLLEVYKRSFDICMQLYEKELLTDSSYLYTYGLQGAHFNAQQL 468
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
A+VAGL EWRDV+ARA+DESTGY+LPN+TL+EIAKQ+P T +KLRRLLKSKH Y+ER +G
Sbjct: 469 AIVAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTTSKLRRLLKSKHPYVERNLG 528
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEET-------EVLVLDTSSNLKIPNVGR 173
PV+SII++S+ NAA FE AQ LKE + ASE+ E L ++ ++++ +
Sbjct: 529 PVVSIIRHSILNAAAFEAAAQHLKEGHIGTASEDNTVDTTGFEALPSESPTSIRAADARA 588
Query: 174 ESVDGVDALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAH-PGEAIASENKEA 232
ES D + + G + K+ + GS++ G G + PGE+ ++++
Sbjct: 589 ESFDTDNVINGGKTDKLQTFVSAKEYHMEPGSTIDGPGSKGQGGSSEPPGESKEVKDEKD 648
Query: 233 THI-----STLSSSGQSRDLN--ACKSPSPRVTEAAVQALKKPNRGFGALLGN--PKRKF 283
+ I T +SSGQSRD + S S +VTE VQ LKKPNR FG+LLGN KRK
Sbjct: 649 SFIPEVARETPASSGQSRDTDTHTSVSQSEKVTEVTVQLLKKPNRAFGSLLGNSASKRKL 708
Query: 284 DGEKKDKEAMKLEQIKSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSGEQT 343
+ + K KE +KLEQIKSSVNLPFHS S N+ +L +
Sbjct: 709 NSDPKGKEDIKLEQIKSSVNLPFHSF--------------SGGNREEL-----------S 743
Query: 344 KPIIEESNRVTVVSQSEEP--APAARPDTEDIITLEDDIDEEEQNLGNLETASAP---GE 398
K EE +V SEEP PA+R D E+II E++ +E GN A+ E
Sbjct: 744 KLDTEEHTKVLETQGSEEPLAVPASRNDLEEIIMFEENSGSDESVNGNSGAANEQLEGKE 803
Query: 399 DGSAGSALEMGKQDETMSLSDLSTSFQECFHSANNNRKPGKPERSEEPSGFLQLKPFDFE 458
D GS LEM + +E MSL+DLS+ FQ+C S N RK + E+S+E +G LQ+KPFD+E
Sbjct: 804 DNPKGSGLEMDEGNEPMSLTDLSSGFQKCSQSLNETRKARRVEKSQESNGLLQVKPFDYE 863
Query: 459 AARKQIEFGEDAKEKSAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKELSQGRRRSAFP 518
AARKQ+ FGED E+S G +G + V+S KK+ + Q +D T + +QGRRR AFP
Sbjct: 864 AARKQVRFGEDP-EESRGKEG-RGGLVDSVSKKRSLGKGRVQGEDETGDYAQGRRRQAFP 921
Query: 519 ATGNRSATFR 528
ATGNRS TFR
Sbjct: 922 ATGNRSVTFR 931
>gi|296085897|emb|CBI31221.3| unnamed protein product [Vitis vinifera]
Length = 901
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 258/550 (46%), Positives = 342/550 (62%), Gaps = 50/550 (9%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+ +L SM E ENS+ L EVYKRS+D+C QLYEKELL+++SYL+ YGLQGA NAQQL
Sbjct: 380 MRTQLLSMA-ELENSNALLLEVYKRSFDICMQLYEKELLTDSSYLYTYGLQGAHFNAQQL 438
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
A+VAGL EWRDV+ARA+DESTGY+LPN+TL+EIAKQ+P T +KLRRLLKSKH Y+ER +G
Sbjct: 439 AIVAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTTSKLRRLLKSKHPYVERNLG 498
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEET-------EVLVLDTSSNLKIPNVGR 173
PV+SII++S+ NAA FE AQ LKE + ASE+ E L ++ ++++ +
Sbjct: 499 PVVSIIRHSILNAAAFEAAAQHLKEGHIGTASEDNTVDTTGFEALPSESPTSIRAADARA 558
Query: 174 ESVDGVDALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAH-PGEAIASENKEA 232
ES D + + G + K+ + GS++ G G + PGE+ ++++
Sbjct: 559 ESFDTDNVINGGKTDKLQTFVSAKEYHMEPGSTIDGPGSKGQGGSSEPPGESKEVKDEKD 618
Query: 233 THI-----STLSSSGQSRDLN--ACKSPSPRVTEAAVQALKKPNRGFGALLGN--PKRKF 283
+ I T +SSGQSRD + S S +VTE VQ LKKPNR FG+LLGN KRK
Sbjct: 619 SFIPEVARETPASSGQSRDTDTHTSVSQSEKVTEVTVQLLKKPNRAFGSLLGNSASKRKL 678
Query: 284 DGEKKDKEAMKLEQIKSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSGEQT 343
+ + K KE +KLEQIKSSVNLPFHS S N+ +L +
Sbjct: 679 NSDPKGKEDIKLEQIKSSVNLPFHSF--------------SGGNREEL-----------S 713
Query: 344 KPIIEESNRVTVVSQSEEP--APAARPDTEDIITLEDDIDEEEQNLGNLETASAP---GE 398
K EE +V SEEP PA+R D E+II E++ +E GN A+ E
Sbjct: 714 KLDTEEHTKVLETQGSEEPLAVPASRNDLEEIIMFEENSGSDESVNGNSGAANEQLEGKE 773
Query: 399 DGSAGSALEMGKQDETMSLSDLSTSFQECFHSANNNRKPGKPERSEEPSGFLQLKPFDFE 458
D GS LEM + +E MSL+DLS+ FQ+C S N RK + E+S+E +G LQ+KPFD+E
Sbjct: 774 DNPKGSGLEMDEGNEPMSLTDLSSGFQKCSQSLNETRKARRVEKSQESNGLLQVKPFDYE 833
Query: 459 AARKQIEFGEDAKEKSAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKELSQGRRRSAFP 518
AARKQ+ FGED E+S G +G + V+S KK+ + Q +D T + +QGRRR AFP
Sbjct: 834 AARKQVRFGEDP-EESRGKEG-RGGLVDSVSKKRSLGKGRVQGEDETGDYAQGRRRQAFP 891
Query: 519 ATGNRSATFR 528
ATGNRS TFR
Sbjct: 892 ATGNRSVTFR 901
>gi|356565747|ref|XP_003551099.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 889
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 249/534 (46%), Positives = 326/534 (61%), Gaps = 70/534 (13%)
Query: 1 MKIKLSSMPKESENS---DTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNA 57
M+IKL ++ KESE+S DTPL EVYKRSYDVC QLYEKELL+ENSYLHIYGLQGAG NA
Sbjct: 420 MRIKLFALSKESESSESSDTPLVEVYKRSYDVCIQLYEKELLTENSYLHIYGLQGAGFNA 479
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIER 117
QQLA+V+GLCEWRD++ARA+DESTGYVLPN++++EIAKQ+P T +KLRRL+KSKH Y+E
Sbjct: 480 QQLAIVSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQMPLTTSKLRRLVKSKHPYVEH 539
Query: 118 YMGPVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVD 177
+ V+SII++S+QNAA+FE AQ+LKE + AS+ V T P+ R S +
Sbjct: 540 NLDTVVSIIRHSIQNAASFEEAAQQLKEAQAVTASDVVPV----TDGTEDPPSHTRHSKE 595
Query: 178 GVDALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKEATHIST 237
T++P L EPPK ++AE
Sbjct: 596 SSQHQ-ATSVPIKIKSNSLIFEPPKDSLTIAE---------------------------- 626
Query: 238 LSSSGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGN--PKRKFDGEKKDKEAMKL 295
Q+RD N + + AAVQ LKKP FGALLG+ KRK G K KE +KL
Sbjct: 627 -----QNRDANVGALSTAKGNGAAVQVLKKPTGAFGALLGSSASKRKL-GPGKGKEEIKL 680
Query: 296 EQIKSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSGEQTKPIIEESNRVTV 355
EQI+SSV+LPFHS E KSEP + ++P +S S E KP+ + V
Sbjct: 681 EQIRSSVSLPFHSFLGSSE--------KSEPTE-EIPSVASEMS-EPQKPVSD------V 724
Query: 356 VSQSEEPAPAARPDTEDIITLEDDIDEEEQNLGNLETASAPGEDGSAGSALEMGKQDETM 415
VS S ++II LE D ++ NLE ++ E S S +DE +
Sbjct: 725 VSASP---------VDEIIMLESDTGAKDMEQNNLENSNEHREKDSVVSTSGKEDEDEPV 775
Query: 416 SLSDLSTSFQECFHSANNNRKPGKPERSEEPSGFLQLKPFDFEAARKQIEFGEDAKEKSA 475
SLS+LS++ ++CFHS + N K +P+++E+PSG +QLKPFD+EAARK ++FGE K S+
Sbjct: 776 SLSELSSNLKKCFHSNDQNNKIRQPKKTEQPSGLVQLKPFDYEAARKHVKFGEHKKHASS 835
Query: 476 -GVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKELSQGRRRSAFPATGNRSATFR 528
G DG+ +SG KK+ S Q Q D +K+L QGRRR AFPA+GNRS+TFR
Sbjct: 836 KGSDGHMEVVEDSGSKKQRSTTGQGQASDLSKQLPQGRRRQAFPASGNRSSTFR 889
>gi|255569470|ref|XP_002525702.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223535002|gb|EEF36685.1| 3'-5' exonuclease, putative [Ricinus communis]
Length = 857
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 242/548 (44%), Positives = 313/548 (57%), Gaps = 103/548 (18%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+I L SMP E+ENS++PL EVYKRSYDVC QLYEKELL+E+SYLHIYGLQ AG NAQQL
Sbjct: 393 MRIMLLSMPNETENSNSPLAEVYKRSYDVCMQLYEKELLTESSYLHIYGLQTAGFNAQQL 452
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
A+VAGLCEWRDVIAR +DESTG++LPN+TL+EIAKQ+P T KLRR LKSKH YIER +G
Sbjct: 453 AIVAGLCEWRDVIARTEDESTGFILPNKTLLEIAKQMPVTPQKLRRALKSKHPYIERNLG 512
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERME-----------VASEETEVLV---LDTSSNL 166
V+++++++MQNAA FE AQ+LKE +E + + + V V +D +NL
Sbjct: 513 SVVNVVRHAMQNAAEFEAAAQRLKEGCIETDNLSSIFAFFMKASQDNVEVNDDMDMDTNL 572
Query: 167 KIPNVGRESVDGVDALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIA 226
+ G E++ A+ G+ QLK+EP K ++
Sbjct: 573 ETAEAGTETICDGSAVEGSENALQTDSPQLKKEPLKAALAI------------------- 613
Query: 227 SENKEATHISTLSSSGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGNP---KRKF 283
+A VQ LKKP FGALLG KR+F
Sbjct: 614 --------------------------------DATVQVLKKPAGAFGALLGKSSAGKRRF 641
Query: 284 DGEKKDKEAMKLEQIKSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSGEQT 343
D KKDK+ +KL++I+SSV+LPFHS R E P+
Sbjct: 642 DMAKKDKDEIKLDKIRSSVSLPFHSFLGRKE-------------------PA-------- 674
Query: 344 KPIIEESNRVTVVSQSEE--PAPAARPDTEDIITLEDDIDEEEQNLGNLETASAPGEDGS 401
KP EE N VT + EE PA EDII L D+ D Q + +T S
Sbjct: 675 KPAAEEPNLVTETPRPEESFAVPATGSSLEDIILLGDNSDVVVQENVDSDTKDV---SKS 731
Query: 402 AGSALEMGKQDETMSLSDLSTSFQECFHSANNNRKPGKP-ERSEEPSGFLQLKPFDFEAA 460
G E ++ E SLSDLSTSFQ+CF S N N+ ++S++P+G LQLKPFD+ AA
Sbjct: 732 VGCESETDEEGEPASLSDLSTSFQKCFQSNNENKTNENNMQKSQDPTGLLQLKPFDYAAA 791
Query: 461 RKQIEFGEDAKEKSAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKELSQGRRRSAFPAT 520
RK++ FGE++K S G D ++ V D++K S +KDDGT++ QG+RR AFPAT
Sbjct: 792 RKEVIFGEESKAASGGKDQSRNDGVK--DRRKNSVGGGVEKDDGTRDFPQGKRRQAFPAT 849
Query: 521 GNRSATFR 528
GNRSATFR
Sbjct: 850 GNRSATFR 857
>gi|224123860|ref|XP_002319182.1| predicted protein [Populus trichocarpa]
gi|222857558|gb|EEE95105.1| predicted protein [Populus trichocarpa]
Length = 858
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 252/539 (46%), Positives = 311/539 (57%), Gaps = 88/539 (16%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+ L S P ++EN+D PL EVYKRSYDVC QLYEKEL +ENSYL++YGL AG NAQQL
Sbjct: 397 MRALLLSKPIDNENADPPLLEVYKRSYDVCMQLYEKELFTENSYLNMYGLPSAGFNAQQL 456
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
A+VAGL EWRD IARA+DESTGY+LPN+TL+EIAK++P T +KLR+LLKSKHSYIER++
Sbjct: 457 AIVAGLYEWRDAIARAEDESTGYILPNKTLLEIAKEMPVTISKLRQLLKSKHSYIERHLS 516
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVDGVD 180
V+SII++SMQ +A FE Q LKE ME+AS+E E D S IP G GV
Sbjct: 517 SVVSIIRHSMQTSAAFEAAVQHLKERHMEIASQE-ETEANDGSEARSIPG-GNGMNSGVA 574
Query: 181 ALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKEATHISTLSS 240
A T+ QL++ K GSS+ EL R G GS A H
Sbjct: 575 ACHETS-------AQLEKGLLKQGSSIVELGRGGQGS-------------SAKH------ 608
Query: 241 SGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGN--PKRKFDGEKKDKEAMKLEQI 298
A VQ LKKP FGALLG KRK D +KK KE +KLE+I
Sbjct: 609 ------------------HATVQVLKKPTGAFGALLGGAVAKRKLDTDKKVKEKIKLEKI 650
Query: 299 KSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSGEQTKPIIEESNRVTVVSQ 358
+SSVNLPFHS G E K ++EE V+ +S
Sbjct: 651 RSSVNLPFHSF---------------------------MGINEPPKVVVEEPIGVSEISH 683
Query: 359 SEEP--APAARPDTEDIITLEDDIDEE------EQNLGNLETASAPGEDGSAGSALEMGK 410
EE PA +DII L++D D E E + + +T +A G+D S+GSALE
Sbjct: 684 PEESLDVPATGSSLQDIILLDNDSDMEQNTHIAEPDRDDSKTTNANGDDKSSGSALETDG 743
Query: 411 QDETMSLSDLSTSFQECFHSANNNRKPGKPERSEEPSGFLQLKPFDFEAARKQIEFGED- 469
+ E +SL+DLS SFQ+CF S N N+K + +S EPSG L+LKPFD+ A + GED
Sbjct: 744 E-EPVSLADLSMSFQKCFPSGNQNKKTAEVMKSGEPSGGLKLKPFDYTTALRS---GEDP 799
Query: 470 AKEKSAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKELSQGRRRSAFPATGNRSATFR 528
A G N+R ++S K S + QKDD T E QGRRR AFPATGNRSATFR
Sbjct: 800 AGRLKVGSAKNQRGVLDSVGTIKSSPGAKMQKDDETGEYRQGRRRQAFPATGNRSATFR 858
>gi|449462768|ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumis sativus]
Length = 936
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 255/560 (45%), Positives = 327/560 (58%), Gaps = 69/560 (12%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M++KL+SMP+ESE SD PL EVYKRS+DVC LYEKELL+E+SYL++YGLQG+G +AQQL
Sbjct: 414 MRMKLASMPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQL 473
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
AV AGL EWRDV+ARA+DESTGY+LPN+TL+EIAKQ+P T KLRRLLKSKH YIER +
Sbjct: 474 AVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLA 533
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEET-------EVLVLDTSSNLKIPNVGR 173
+++II++SM N+ FE AQ+LKE R E ASEE E + DT N+K V
Sbjct: 534 SIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDN 593
Query: 174 ESVDGVDALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASEN---- 229
D V + P S VA L+R G F PG+ + ++
Sbjct: 594 TPSDRVCS-------------------PSSQSKVAPLER-GYRPFV-PGKCVKVDHSLHP 632
Query: 230 --KEATHISTL--SSSGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGN--PKRKF 283
+ HIS + ++S S+ N K P VT + KK NRG G+LLGN PKRK
Sbjct: 633 VLNGSRHISPVGPTTSEPSKHSNGDKYPVAHVTGVNISLQKKTNRGLGSLLGNSAPKRKL 692
Query: 284 DGEKKDKEAMKLEQIKSSVNLPFHSIFARDEQLK----PVDVMKSEPNKPDLPFPSSFGS 339
D +KKDKE KL++I+SSV LPFHS EQLK P V + +LP S S
Sbjct: 693 DIDKKDKEESKLDKIRSSVTLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKS 752
Query: 340 GEQTKPIIEESNRVTVVSQSEEPAPAARPDTEDIITLEDDIDEEEQNLGNL--------- 390
P + P P P T++II LEDD D+ ++
Sbjct: 753 SNVEPPAV--------------PVPKPFP-TDEIIMLEDDSDDNVEDEDEDEDEELRAVD 797
Query: 391 ETASAPGEDG-SAGSALEMGKQDETMSLSDLSTSFQECFHSANNNRKPGKPERSEEPSGF 449
E P G SA S LE+ DE MSLS+LS+SFQ+C +S G+ + S F
Sbjct: 798 EATGEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNSNEKAMNVGETDNPGNQSDF 857
Query: 450 LQLKPFDFEAARKQIEFGEDAKEKSAGV-DGNKRKPVNSGDKKKVSAVDQAQKDDGTKEL 508
LQ+KPFD+EAARK++ FGED +E D + + N+G K + +D+ QK+ GT EL
Sbjct: 858 LQIKPFDYEAARKEVVFGEDLEEDLEPENDKDPKASKNAGAKLDL-GLDRVQKNSGTVEL 916
Query: 509 SQGRRRSAFPATGNRSATFR 528
QG+RR AFPATGNRSATFR
Sbjct: 917 PQGKRRHAFPATGNRSATFR 936
>gi|449522510|ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumis sativus]
Length = 935
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 250/559 (44%), Positives = 323/559 (57%), Gaps = 68/559 (12%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M++KL+SMP+ESE SD PL EVYKRS+DVC LYEKELL+E+SYL++YGLQG+G +AQQL
Sbjct: 414 MRMKLASMPRESEESDLPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQL 473
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
AV AGL EWRDV+ARA+DESTGY+LPN+TL+EIAKQ+P T KLRRLLKSKH YIER +
Sbjct: 474 AVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLA 533
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEET-------EVLVLDTSSNLKIPNVGR 173
+++II++SM N+ FE AQ+LKE R E ASEE E + DT N+K V
Sbjct: 534 SIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDTILNMKNSAVDN 593
Query: 174 ESVDGVDALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASEN---- 229
D V + P S VA L+R G F PG+ + ++
Sbjct: 594 TPSDRVCS-------------------PSSQSKVAPLER-GYRPFV-PGKCVKVDHSLHP 632
Query: 230 --KEATHISTL--SSSGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGN--PKRKF 283
+ HIS + ++S S+ N K P VT + KK NRG G+LLGN PKRK
Sbjct: 633 VLNGSRHISPVGPTTSEPSKHSNGDKYPVAHVTGVNISLQKKTNRGLGSLLGNSAPKRKL 692
Query: 284 DGEKKDKEAMKLEQIKSSVNLPFHSIFARDEQLK----PVDVMKSEPNKPDLPFPSSFGS 339
D +KKDKE KL++I+SSV LPFHS EQLK P V + +LP S S
Sbjct: 693 DIDKKDKEESKLDKIRSSVTLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKS 752
Query: 340 GEQTKPIIEESNRVTVVSQSEEPAPAARPDTEDIITLEDDIDEEEQNLGNL--------- 390
P + P P P T++II LEDD D+ ++
Sbjct: 753 SNVEPPAV--------------PVPKPFP-TDEIIMLEDDSDDNVEDEDEDEDEELRAVD 797
Query: 391 ETASAPGEDG-SAGSALEMGKQDETMSLSDLSTSFQECFHSANNNRKPGKPERSEEPSGF 449
E P G SA S LE+ DE MSLS+LS+SFQ+C +S G+ + S F
Sbjct: 798 EATGEPKLKGLSASSPLEIDDDDEPMSLSELSSSFQKCLNSNEKAMNVGETDNPGNQSDF 857
Query: 450 LQLKPFDFEAARKQIEFGEDAKEKSAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKELS 509
LQ+KPFD+EAARK + + ++ D + + N+G K + +D+ QK+ GT EL
Sbjct: 858 LQIKPFDYEAARKVVFGEDLEEDLEPENDKDPKASKNAGAKLDL-GLDRVQKNSGTVELP 916
Query: 510 QGRRRSAFPATGNRSATFR 528
QG+RR AFPATGNRSATFR
Sbjct: 917 QGKRRHAFPATGNRSATFR 935
>gi|356514039|ref|XP_003525715.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 877
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 227/535 (42%), Positives = 308/535 (57%), Gaps = 80/535 (14%)
Query: 1 MKIKLSSMPKESENS---DTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNA 57
M+I+L ++ KESE+S DTP EVYKRSYDVC QLYEKE L+ENSYLHIYGLQGAG NA
Sbjct: 416 MRIRLFALSKESESSESSDTPPVEVYKRSYDVCMQLYEKEFLTENSYLHIYGLQGAGFNA 475
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIER 117
QQLA+V+GLCEWRD++ARA+DESTGYVLPN++++EIAKQ+P T +KLRRL+KSKH Y+E
Sbjct: 476 QQLAIVSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQMPLTTSKLRRLVKSKHPYVEH 535
Query: 118 YMGPVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVD 177
+ V+SII++S+QN+A FE AQ+LKE + AS+ V+ + + P +
Sbjct: 536 NLDTVVSIIRHSIQNSAAFEEAAQQLKEAQAGTASD-----VVPFTDGTEDPQSHTQDSK 590
Query: 178 GVDALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKEATHIST 237
T +P L+ EPPK +
Sbjct: 591 ESSNHQDTNVPINLKSNSLRSEPPK---------------------------------DS 617
Query: 238 LSSSGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGN--PKRKFDGEKKDKEAMKL 295
L+ + Q+RD N + + A VQ LKKP FGALLGN KRK G K KE KL
Sbjct: 618 LTIADQNRDANVGALSTTKGNGATVQVLKKPTGAFGALLGNSASKRKL-GPDKGKEDSKL 676
Query: 296 EQIKSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSGEQTKPIIEESNRVTV 355
EQI+SSV+LPFHS GS E+++P +E +
Sbjct: 677 EQIRSSVSLPFHSF---------------------------LGSSEKSEPTVETHTVASE 709
Query: 356 VSQSEEPAP--AARPDTEDIITLEDDIDEEEQNLGNLETASAPGEDGSAGSALEMGKQDE 413
+ +S+ P + ++II LE E NLE++S E S S +DE
Sbjct: 710 MLESQRPVSDVVSVSPLDEIIMLESGTGAENMEQNNLESSSEHREKDSVVSISGKEDEDE 769
Query: 414 TMSLSDLSTSFQECFHSANNNRKPGKPERSEEPSGFLQLKPFDFEAARKQIEFGEDAKEK 473
++SL +LS++F++CFHS + N K P+++E+PSG + +KPFD+EAARK ++FGE K
Sbjct: 770 SVSLLELSSNFKKCFHSNDQNYKTRWPKKTEQPSGLVPMKPFDYEAARKHVKFGEHTKHA 829
Query: 474 SAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKELSQGRRRSAFPATGNRSATFR 528
S+ + + +SG KK+ S + Q Q L QGRRR AFPA+GNRS+TFR
Sbjct: 830 SSKGSDSHMEVEDSGSKKQRSTIGQGQ-------LPQGRRRQAFPASGNRSSTFR 877
>gi|224144831|ref|XP_002325430.1| predicted protein [Populus trichocarpa]
gi|222862305|gb|EEE99811.1| predicted protein [Populus trichocarpa]
Length = 855
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 243/539 (45%), Positives = 305/539 (56%), Gaps = 90/539 (16%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+ L + +++N D PL EVYKRSYDVC QLYEKEL +ENSYL++YGL AG NAQQL
Sbjct: 396 MRALLLTKHSDNDNGDPPLVEVYKRSYDVCMQLYEKELFTENSYLNMYGLPNAGFNAQQL 455
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
A+VAGL EWRD IARA+DESTGY+LPN+TL+EIAK++P T +KLRRLLKSKHSYIER++
Sbjct: 456 AIVAGLYEWRDAIARAEDESTGYILPNKTLLEIAKEMPVTPSKLRRLLKSKHSYIERHLS 515
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVDGVD 180
V+SII++SMQ +A FE Q LKE ME AS++ DT N +SV G +
Sbjct: 516 SVVSIIRHSMQTSAAFEAAVQHLKERLMETASQK------DTEVN---DGCEEKSVHGGN 566
Query: 181 ALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKEATHISTLSS 240
+ G+ QLK+ K GSS+ EL + G S A H
Sbjct: 567 GMNGSVAAE--TSMQLKRGLLKQGSSIVELGKGGHES-------------SAKH------ 605
Query: 241 SGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALL--GNPKRKFDGEKKDKEAMKLEQI 298
A VQ LKKP FGALL KRK +KK E +KLE+I
Sbjct: 606 ------------------HATVQILKKPTGAFGALLRGAAAKRKLGTDKKVGEEVKLEKI 647
Query: 299 KSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSGEQTKPIIEESNRVTVVSQ 358
+SSVNLPFHS R+E KPV +PI+ E +S
Sbjct: 648 RSSVNLPFHSFMPRNEPPKPV----------------------VEEPIVSE------ISH 679
Query: 359 SEE--PAPAARPDTEDIITLEDDID-EEEQNLGNLET-----ASAPGEDGSAGSALEMGK 410
EE PA +DII L+DD D E++ +G E + +D S+G+ALE K
Sbjct: 680 PEESLAVPATGSSLQDIIMLDDDSDMEQDTRIGEPERDDSKPTNVNRDDISSGTALETDK 739
Query: 411 QDETMSLSDLSTSFQECFHSANNNRKPGKPERSEEPSGFLQLKPFDFEAARKQIEFGEDA 470
+E +SLSDLSTS Q+ F S+N NR+ + ++S E S L+LKPFD+ AA + FGE
Sbjct: 740 VEEPVSLSDLSTSSQKRFQSSNQNRRTAEGKKSGESSSVLKLKPFDYTAA---LRFGEGP 796
Query: 471 KEK-SAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKELSQGRRRSAFPATGNRSATFR 528
EK G D N+R S K K S QKDD T E +GRRR AFPA+GNRSATFR
Sbjct: 797 TEKLKVGNDKNQRDVRVSVGKIKSSPGAPVQKDDETGEFREGRRRQAFPASGNRSATFR 855
>gi|297805136|ref|XP_002870452.1| hypothetical protein ARALYDRAFT_355577 [Arabidopsis lyrata subsp.
lyrata]
gi|297316288|gb|EFH46711.1| hypothetical protein ARALYDRAFT_355577 [Arabidopsis lyrata subsp.
lyrata]
Length = 867
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 212/540 (39%), Positives = 289/540 (53%), Gaps = 105/540 (19%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L M K+ E++D+PL +VYKRSYDVC QLYEKELL+ENSYLH+YGLQ AG NA QL
Sbjct: 420 MRLELERMAKDDEHTDSPLLQVYKRSYDVCTQLYEKELLTENSYLHVYGLQAAGFNAAQL 479
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
A+VAGLCEWRD IARA+DESTGYVLPN+ L+EIAK++P + KLRR+LKSKH YIER +
Sbjct: 480 AIVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPVSVGKLRRMLKSKHPYIERNVD 539
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVDGVD 180
V+S+I+ SMQN+A FE A LK D
Sbjct: 540 SVVSVIRQSMQNSAAFESAALSLK-----------------------------------D 564
Query: 181 ALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKEATHISTLSS 240
GT M + K++ V + L N + E+ N +A + + S
Sbjct: 565 VSPGTVMDKNIEHISEKKDMHAVDVASPSLKEN-----SSQLESTRDLNMDAANTNEGSG 619
Query: 241 SGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGNP--KRKFDGEKKDKEAMKLEQI 298
G +A S + R++ KKP+ G GALLG+ K+K ++K KE +KLEQI
Sbjct: 620 LGTGLFGSAKVSAAVRIS-------KKPSSGLGALLGSAASKKKSRTDEKVKEDVKLEQI 672
Query: 299 KSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSGEQTKPIIEESNRVTVVSQ 358
+SSVNL FHS + P S + E T + + + Q
Sbjct: 673 RSSVNLSFHSFTEK--------------------VPDSKSTTETTPKVYGKPEEMFTTMQ 712
Query: 359 SEEPAPAARPDTEDIIT-LEDDIDEEEQNLGNLETASAPGEDGSA---------GSALEM 408
A ED +T L+DD +E + +G S GS G E+
Sbjct: 713 -------ASVSKEDGVTELKDDSEEASEIVGTSGRVSESKVFGSKTGDIILLENGDEKEV 765
Query: 409 GKQDETMSLSDLSTSFQECFHSANNNRKPGKPERSEEPSGFLQLKPFDFEAARKQIEFGE 468
+DE MSLS+LST+FQ+CF S K ++++ + FL ++PFD+EAARK+++FGE
Sbjct: 766 EAEDEPMSLSELSTNFQKCFKSMK------KSNKAQKQTEFLNIEPFDYEAARKEVKFGE 819
Query: 469 DAKEKSAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKELSQGRRRSAFPATGNRSATFR 528
K + +K V +G KKK S +Q+ E QG+RR AFPA+GNRSATF+
Sbjct: 820 GHKGRQG------KKEVAAGQKKKGSGPEQS-------EFGQGKRRQAFPASGNRSATFK 866
>gi|334188034|ref|NP_198440.2| exosome complex exonuclease RRP6 [Arabidopsis thaliana]
gi|160892401|gb|ABX52080.1| RRP6-like protein 2 [Arabidopsis thaliana]
gi|332006642|gb|AED94025.1| exosome complex exonuclease RRP6 [Arabidopsis thaliana]
Length = 870
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 205/545 (37%), Positives = 288/545 (52%), Gaps = 116/545 (21%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
+K++L M K+ ++D+PL EVYKRSYDVC QLYEKELL+ENSYLH+YGLQ AG NA QL
Sbjct: 424 IKLELQRMAKDDAHTDSPLLEVYKRSYDVCTQLYEKELLTENSYLHVYGLQAAGFNAAQL 483
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
A+VAGLCEWRD IARA+DESTGYVLPN+ L+EIAK++P + KLRR+LKSKH YIER +
Sbjct: 484 AIVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPDSVGKLRRMLKSKHPYIERNVD 543
Query: 121 PVLSIIKNSMQNAANFEVIAQKLK--------EERMEVASEETEVLVLDTSSNLKIPNVG 172
V+S+I+ SMQ+ A FE A LK ++ +E SE+ ++ D +S P++
Sbjct: 544 SVVSVIRQSMQHYAAFESAALSLKDVSPGNVMDKNIEPISEKKDLHTGDVAS----PSLK 599
Query: 173 RESVDGVDALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKEA 232
S +QL+ + + + GLGS +++ A
Sbjct: 600 ENS------------------SQLESTRDLIMGAANTNEGRGLGSGLFGSAKVSA----A 637
Query: 233 THISTLSSSGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGNP--KRKFDGEKKDK 290
IS SSG GALLGN K+K ++K K
Sbjct: 638 VRISKKPSSG-----------------------------LGALLGNAASKKKSRTDEKVK 668
Query: 291 EAMKLEQIKSSVNLPFHSIFAR------DEQLKPVDVMKSEPNKPDLPFPSSFGSG-EQT 343
E +KLEQI+SSVNL FHS + + P K E +P S G ++
Sbjct: 669 EDVKLEQIRSSVNLSFHSFTEKVPDSKSTSETSPKVYGKPEEMSSTMPASVSKEDGVKEL 728
Query: 344 KPIIEESNRVTVVSQSEEPAPAARPDTEDIITLEDDIDEEEQNLGNLETASAPGEDGSAG 403
K EE++ + S + + + DII LE+ G
Sbjct: 729 KDDSEEASEIVGTSGRVSESKVSSSEMGDIILLEN------------------------G 764
Query: 404 SALEMGKQDETMSLSDLSTSFQECFHSANNNRKPGKPERSEEPSGFLQLKPFDFEAARKQ 463
++ +DE MSLS+LST+FQ+CF S N ++K +++ + FL ++PFD+EAARK+
Sbjct: 765 DEKKVDAEDEPMSLSELSTNFQKCFKSMNKSKK------AQKQTEFLNIEPFDYEAARKE 818
Query: 464 IEFGEDAKEKSAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKELSQGRRRSAFPATGNR 523
++FGE G G + K + +KK S +Q+ E QG+RR AFPA+GNR
Sbjct: 819 VKFGE-------GHKGRQGKREAAAGQKKGSTQEQS-------EFGQGKRRQAFPASGNR 864
Query: 524 SATFR 528
S +F+
Sbjct: 865 SMSFK 869
>gi|10176710|dbj|BAB09932.1| nucleolar protein-like [Arabidopsis thaliana]
Length = 834
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 205/546 (37%), Positives = 288/546 (52%), Gaps = 117/546 (21%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
+K++L M K+ ++D+PL EVYKRSYDVC QLYEKELL+ENSYLH+YGLQ AG NA QL
Sbjct: 387 IKLELQRMAKDDAHTDSPLLEVYKRSYDVCTQLYEKELLTENSYLHVYGLQAAGFNAAQL 446
Query: 61 AVVA-GLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYM 119
A+VA GLCEWRD IARA+DESTGYVLPN+ L+EIAK++P + KLRR+LKSKH YIER +
Sbjct: 447 AIVAVGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPDSVGKLRRMLKSKHPYIERNV 506
Query: 120 GPVLSIIKNSMQNAANFEVIAQKLK--------EERMEVASEETEVLVLDTSSNLKIPNV 171
V+S+I+ SMQ+ A FE A LK ++ +E SE+ ++ D +S P++
Sbjct: 507 DSVVSVIRQSMQHYAAFESAALSLKDVSPGNVMDKNIEPISEKKDLHTGDVAS----PSL 562
Query: 172 GRESVDGVDALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKE 231
S +QL+ + + + GLGS +++
Sbjct: 563 KENS------------------SQLESTRDLIMGAANTNEGRGLGSGLFGSAKVSA---- 600
Query: 232 ATHISTLSSSGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGNP--KRKFDGEKKD 289
A IS SSG GALLGN K+K ++K
Sbjct: 601 AVRISKKPSSG-----------------------------LGALLGNAASKKKSRTDEKV 631
Query: 290 KEAMKLEQIKSSVNLPFHSIFAR------DEQLKPVDVMKSEPNKPDLPFPSSFGSG-EQ 342
KE +KLEQI+SSVNL FHS + + P K E +P S G ++
Sbjct: 632 KEDVKLEQIRSSVNLSFHSFTEKVPDSKSTSETSPKVYGKPEEMSSTMPASVSKEDGVKE 691
Query: 343 TKPIIEESNRVTVVSQSEEPAPAARPDTEDIITLEDDIDEEEQNLGNLETASAPGEDGSA 402
K EE++ + S + + + DII LE+
Sbjct: 692 LKDDSEEASEIVGTSGRVSESKVSSSEMGDIILLEN------------------------ 727
Query: 403 GSALEMGKQDETMSLSDLSTSFQECFHSANNNRKPGKPERSEEPSGFLQLKPFDFEAARK 462
G ++ +DE MSLS+LST+FQ+CF S N ++K +++ + FL ++PFD+EAARK
Sbjct: 728 GDEKKVDAEDEPMSLSELSTNFQKCFKSMNKSKK------AQKQTEFLNIEPFDYEAARK 781
Query: 463 QIEFGEDAKEKSAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKELSQGRRRSAFPATGN 522
+++FGE G G + K + +KK S +Q+ E QG+RR AFPA+GN
Sbjct: 782 EVKFGE-------GHKGRQGKREAAAGQKKGSTQEQS-------EFGQGKRRQAFPASGN 827
Query: 523 RSATFR 528
RS +F+
Sbjct: 828 RSMSFK 833
>gi|147776669|emb|CAN74351.1| hypothetical protein VITISV_038575 [Vitis vinifera]
Length = 452
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 189/480 (39%), Positives = 258/480 (53%), Gaps = 76/480 (15%)
Query: 97 LPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAANFEVIAQKLKEERMEVASEET- 155
+P T +KLRRLLKSKH Y+ER +GPV+SII++S+ NAA FE AQ LKE + ASE+
Sbjct: 1 MPVTTSKLRRLLKSKHPYVERNLGPVVSIIRHSILNAAAFEAAAQHLKEGHIGTASEDNT 60
Query: 156 ------EVLVLDTSSNLKIPNVGRESVDGVDALVGTTMPHPPAYTQLKQEPPKVGSSVAE 209
E L ++ ++++ + ES D + + G + K+ + GS++
Sbjct: 61 VDTTGFEALPSESPTSIRAADARAESFDTDNVINGGKTDKLQTFVSAKEYHMEPGSTIDG 120
Query: 210 LDRNGLGSFAHP-GEAIASENKEATHI-----STLSSSGQSRDLNACKS--PSPRVTEAA 261
G G + P GE+ ++++ + I T +SSGQSRD + S S +VTE
Sbjct: 121 PGSKGQGGSSEPPGESKEVKDEKDSFIPEVARETPASSGQSRDTDTHTSVSQSEKVTEVT 180
Query: 262 VQALKKPNRGFGALLGNP--KRKFDGEKK-------------------------DKEAMK 294
VQ LKKPNR FG+LLGN KRK + + K KE +K
Sbjct: 181 VQLLKKPNRAFGSLLGNSASKRKLNSDPKVCNSDWVSLAQPVKMQDWVEECPLBGKEDIK 240
Query: 295 LEQIKSSVNLPFHSIFARD-EQLKPVDVMKSEPNKPDLPFPSSFGSGEQTKPIIEESNRV 353
LEQIKSSVNLPFHS + E+L +D EE +V
Sbjct: 241 LEQIKSSVNLPFHSFSGGNREELSKLDT--------------------------EEHTKV 274
Query: 354 TVVSQSEEP--APAARPDTEDIITLEDDIDEEEQNLGNLETASAP---GEDGSAGSALEM 408
SEEP PA+R D E+II E++ +E GN A+ ED GS LEM
Sbjct: 275 LETQGSEEPLAVPASRNDLEEIIMFEENSGSDESVNGNSGAANEQLEGKEDNPKGSGLEM 334
Query: 409 GKQDETMSLSDLSTSFQECFHSANNNRKPGKPERSEEPSGFLQLKPFDFEAARKQIEFGE 468
+ +E MSL+DLS+ FQ+C S N RK + E+S+E +G LQ+KPFD+EAARKQ+ FGE
Sbjct: 335 DEGNEPMSLTDLSSGFQKCSQSLNETRKARRVEKSQESNGLLQVKPFDYEAARKQVRFGE 394
Query: 469 DAKEKSAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKELSQGRRRSAFPATGNRSATFR 528
D E+S G +G + V+S KK+ + Q +D T + +QGRRR AFPATGNRS TFR
Sbjct: 395 DP-EESRGKEG-RGGLVDSVSKKRSLGKGRVQGEDETGDYAQGRRRQAFPATGNRSVTFR 452
>gi|357146328|ref|XP_003573952.1| PREDICTED: exosome component 10-like [Brachypodium distachyon]
Length = 906
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 182/541 (33%), Positives = 282/541 (52%), Gaps = 76/541 (14%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L + ES + + L EV KRS ++C QLYEKELL+++SYL+I+GL+ L+A+QL
Sbjct: 429 MRLRLVN---ESSDENDLLLEVCKRSNEICLQLYEKELLTDSSYLYIHGLKENELSARQL 485
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
AV++GL +WRD +ARA+DESTGY+LPN+ L+EIAKQ+P T+ +L+R +KSK+ ++ER++G
Sbjct: 486 AVLSGLYQWRDSVARAEDESTGYILPNKALLEIAKQMPLTSGRLKRTVKSKNPFLERHLG 545
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLVLD----TSSNLKIPNVGRESV 176
V++II+N+++N+ FE IA++LK+ R+E E+LV D T IP V +++
Sbjct: 546 HVITIIRNAIENSVAFESIAEQLKKGRLE------ELLVADAKNSTEDTEMIPAVNADNI 599
Query: 177 DGVDALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKEATHIS 236
+ L + P T + +S A L LG+ I E K +S
Sbjct: 600 ESNFVLSDGSALVPTVITNVVTASSGNVTSGASLGNLQLGN-------ITPETKSLVTLS 652
Query: 237 TLSSSGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGNPK-----RKFDGEKKDKE 291
+ + L S +V +A VQ K+P FGALLG F G ++
Sbjct: 653 GPTGLADTEVLT--NSSQQQVAKAKVQVSKRPT-AFGALLGKSSSGRRPNLFPGFSSEQS 709
Query: 292 AMKLEQIKSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSGEQTKPIIEESN 351
K+++IKSSV LPFH F S + P+ E
Sbjct: 710 KSKVDKIKSSVVLPFHH------------------------FSGGVKSPATSLPVAE--- 742
Query: 352 RVTVVSQSEEPAPAARPDTEDIITLEDDIDEEEQNLGNL-ETASAPGEDGSAGSALEMGK 410
++ SE + P ++ +E+ I + +L E + G++ EM
Sbjct: 743 ----LAYSEPESICNDPASQ----MEEVIQLDTGTHNHLPENCNVDGQNHCEPEDTEM-- 792
Query: 411 QDETMSLSDLSTSFQECFHSANNNRKPGKPERS-EEPSGFLQLKPFDFEAARKQIEFGED 469
+ S +LS+ ++ F S N +R + ++ EEP QLKPFD+ ARK I FGE
Sbjct: 793 ---SSSPRELSSGNEQRFRSINESRNVQQNHKALEEPEFHDQLKPFDYAEARKNISFGEV 849
Query: 470 AKEKSAGVDGNKRKPVN--SGDKKKVSAVDQAQKDDGTKELSQGRRRSAFPATGNRSATF 527
E+ D + +N SGDK++ S ++D+G + RRR AFP +GNRSAT+
Sbjct: 850 KSERRK--DNAVARAINKDSGDKRRTSKQPGGEEDEG--DFQNPRRRQAFPPSGNRSATY 905
Query: 528 R 528
Sbjct: 906 H 906
>gi|326521328|dbj|BAJ96867.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 906
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 277/545 (50%), Gaps = 85/545 (15%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L + ES D L EV KRS ++C QLYEKELL+++SYL+I+GL+ L+A+QL
Sbjct: 430 MRLRLVN---ESSGDDL-LLEVCKRSNEICLQLYEKELLTDSSYLYIHGLKENDLSARQL 485
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
AV+AGL +WRD +ARA+DESTGY+LPN+TL+EIAKQ+P T +L+R +KSK+ ++E Y+G
Sbjct: 486 AVLAGLYQWRDGVARAEDESTGYILPNKTLLEIAKQMPVTTGRLKRTVKSKNKFLEHYLG 545
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERME---VA-----SEETEVL-VLDTSSNLKIPNV 171
V++ I+N++ NA FE IA++LK+ R+E VA +E+TE++ +D SN
Sbjct: 546 HVITTIRNAVANADAFESIAEQLKKGRLEELMVAEVKDGAEDTEMISAVDADSN------ 599
Query: 172 GRESVDGVDALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKE 231
++ ++ +V T+ +T G+S+ L + + E K
Sbjct: 600 -ESNLQLIEPVVAPTV-ITNIHTSFCTGNVTSGASLGNLQLDN----------VTPETKS 647
Query: 232 ATHISTLSSSGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGNPKRK-----FDGE 286
+ ++GQ+ + S +V +A VQ K+P FGALLG P F G
Sbjct: 648 FGALP--GATGQADTVIPSNSGQQQVIKATVQVSKRPT-AFGALLGKPSSARRSNLFPGF 704
Query: 287 KKDKEAMKLEQIKSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSGEQTKPI 346
D+ K+E+IKSSV LPFH + P LP
Sbjct: 705 SSDQSKSKVEKIKSSVVLPFHHFSG-----------GANPAATSLP-------------- 739
Query: 347 IEESNRVTVVSQSEEPAPAARPDTEDIITLEDDIDEEEQNLGNLETASAPGEDGSAGSAL 406
V++S EP E I +D + E+ + L+T + E+G+A
Sbjct: 740 ---------VAKSVEP--------EAEIMCDDPASQMEEVI-QLDTGTDDPENGNADGQS 781
Query: 407 EM--GKQDETMSLSDLSTSFQECFHSANNNRK-PGKPERSEEPSGFLQLKPFDFEAARKQ 463
E G D + S +LS+ ++ F N +R K + EEP QLK FD+ ARK
Sbjct: 782 ECKPGDTDVSSSPPELSSGIEQRFRPLNESRDLQQKHQAPEEPEFNDQLKAFDYAEARKN 841
Query: 464 IEFGEDAKEKSAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKELSQGRRRSAFPATGNR 523
FGE E+ + +SGDK++ S ++ RRR AFP +GNR
Sbjct: 842 TSFGEVRSERRKDNAVARAINADSGDKRRSSKQIPGGGEEDEGNFQNPRRRQAFPPSGNR 901
Query: 524 SATFR 528
SAT+
Sbjct: 902 SATYH 906
>gi|222612881|gb|EEE51013.1| hypothetical protein OsJ_31642 [Oryza sativa Japonica Group]
Length = 877
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 186/552 (33%), Positives = 287/552 (51%), Gaps = 98/552 (17%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L KES + + L EVYKRS ++C QLYEKELL+ +SYL+I+GL+ +A+QL
Sbjct: 400 MRLRLV---KESSDENDLLLEVYKRSKEICLQLYEKELLTHSSYLYIHGLKENEFDARQL 456
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V+A + +WRD +AR +DESTGY+LPN+TL+EIAKQ+P T +L+R++KSK+SY+ER++G
Sbjct: 457 SVLANIYKWRDSVARGEDESTGYILPNKTLLEIAKQMPATTGRLKRIVKSKNSYLERHLG 516
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVDGVD 180
V+S I++++ N FE IA++LK+ R+E E+ V + SN DG
Sbjct: 517 HVISTIRSAIANCDAFESIAEQLKKGRLE------ELAVANMKSN-----------DGDT 559
Query: 181 ALVGTTMPHPPAYTQLKQE----PPKVGSSVAELDRNGLGSFAHPGEAIAS--------- 227
+V PA + P +VA ++ +G+ +H + S
Sbjct: 560 EMV-------PADDGNNDDDNVGPSDEHGAVASVE--NVGAASHCTGNVTSGASSVNVQL 610
Query: 228 EN-KEATHISTLSS-SGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGNP---KRK 282
EN E + LS SGQ ++ +V +A VQ K+P FGALLG P +R+
Sbjct: 611 ENPAETKSLGILSGVSGQDMEV-LSNGDRKQVAKATVQVSKRPT-AFGALLGKPTSGRRQ 668
Query: 283 --FDGEKKDKEAMKLEQIKSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSG 340
F G + +++IKSSV LPFH+ F + + E +P+ P S
Sbjct: 669 NLFSGFSSGQNM--VDKIKSSVALPFHN-FCGGAKSPATSIPLEESVRPE---PESI--- 719
Query: 341 EQTKPIIEESNRVTVVSQSEEPAPAARPDTEDIITLEDDIDEEEQNLGNLETASAPGEDG 400
+ + P + + + + ++++ P P + + L D ++E + +P E
Sbjct: 720 QYSDPACQTEDVIQLGTETDGPQPPENHNKDGQGHLVPD---------DMEMSRSPPEHS 770
Query: 401 SAGSALEMGKQDETMSLSDLSTSFQECFHSAN--NNRKPGKPERSEEPSGFLQLKPFDFE 458
SAG+ KQ FQ S N N KP +EP QLKPFD+
Sbjct: 771 SAGA-----KQ-----------RFQSLIESRNQQQNHKP-----HQEPEFNHQLKPFDYA 809
Query: 459 AARKQIEFGEDAKEKSAGVDGNKRKPVN--SGDKKKVSAVDQAQKDDGTKELSQGRRRSA 516
ARK I FGE E+ D + +N SGDK + S A +++G ++ +GR+ A
Sbjct: 810 EARKNITFGERKAERIK--DNAVARAINKDSGDKGRTSNQFGAGENEGNRQNPRGRQ--A 865
Query: 517 FPATGNRSATFR 528
FP +GNRSAT+
Sbjct: 866 FPPSGNRSATYH 877
>gi|110289135|gb|AAP53938.2| Nucleolar protein, putative, expressed [Oryza sativa Japonica
Group]
Length = 902
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 182/551 (33%), Positives = 283/551 (51%), Gaps = 96/551 (17%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L KES + + L EVYKRS ++C QLYEKELL+ +SYL+I+GL+ +A+QL
Sbjct: 425 MRLRLV---KESSDENDLLLEVYKRSKEICLQLYEKELLTHSSYLYIHGLKENEFDARQL 481
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V+A + +WRD +AR +DESTGY+LPN+TL+EIAKQ+P T +L+R++KSK+SY+ER++G
Sbjct: 482 SVLANIYKWRDSVARGEDESTGYILPNKTLLEIAKQMPATTGRLKRIVKSKNSYLERHLG 541
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVDGVD 180
V+S I++++ N FE IA++LK+ R+E E+ V + SN DG
Sbjct: 542 HVISTIRSAIANCDAFESIAEQLKKGRLE------ELAVANMKSN-----------DGDT 584
Query: 181 ALVGTTMPHPPAYTQLKQE----PPKVGSSVAELDRNGLGSFAHPGEAIAS--------- 227
+V PA + P +VA ++ +G+ +H + S
Sbjct: 585 EMV-------PADDGNNDDDNVGPSDEHGAVASVE--NVGAASHCTGNVTSGASSVNVQL 635
Query: 228 ENKEATHISTLSSSGQSRDLNACKSPSPR-VTEAAVQALKKPNRGFGALLGNP-----KR 281
EN T + S +D+ + + V +A VQ K+P FGALLG P +
Sbjct: 636 ENPAETKSLGILSGVSGQDMEVLSNGDRKQVAKATVQVSKRPT-AFGALLGKPTSGRRQN 694
Query: 282 KFDGEKKDKEAMKLEQIKSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSGE 341
F G + +++IKSSV LPFH+ F + + E +P+ P S +
Sbjct: 695 LFSGFSSGQNM--VDKIKSSVALPFHN-FCGGAKSPATSIPLEESVRPE---PESI---Q 745
Query: 342 QTKPIIEESNRVTVVSQSEEPAPAARPDTEDIITLEDDIDEEEQNLGNLETASAPGEDGS 401
+ P + + + + ++++ P P + + L D ++E + +P E S
Sbjct: 746 YSDPACQTEDVIQLGTETDGPQPPENHNKDGQGHLVPD---------DMEMSRSPPEHSS 796
Query: 402 AGSALEMGKQDETMSLSDLSTSFQECFHSAN--NNRKPGKPERSEEPSGFLQLKPFDFEA 459
AG+ KQ FQ S N N KP +EP QLKPFD+
Sbjct: 797 AGA-----KQ-----------RFQSLIESRNQQQNHKP-----HQEPEFNHQLKPFDYAE 835
Query: 460 ARKQIEFGEDAKEKSAGVDGNKRKPVN--SGDKKKVSAVDQAQKDDGTKELSQGRRRSAF 517
ARK I FGE E+ D + +N SGDK + S A +++G ++ +GR+ AF
Sbjct: 836 ARKNITFGERKAERIK--DNAVARAINKDSGDKGRTSNQFGAGENEGNRQNPRGRQ--AF 891
Query: 518 PATGNRSATFR 528
P +GNRSAT+
Sbjct: 892 PPSGNRSATYH 902
>gi|218184595|gb|EEC67022.1| hypothetical protein OsI_33743 [Oryza sativa Indica Group]
Length = 854
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 182/551 (33%), Positives = 283/551 (51%), Gaps = 96/551 (17%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L KES + + L EVYKRS ++C QLYEKELL+ +SYL+I+GL+ +A+QL
Sbjct: 377 MRLRLV---KESSDENDLLLEVYKRSKEICLQLYEKELLTHSSYLYIHGLKENEFDARQL 433
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V+A + +WRD +AR +DESTGY+LPN+TL+EIAKQ+P T +L+R++KSK+ Y+ER++G
Sbjct: 434 SVLANIYKWRDSVARGEDESTGYILPNKTLLEIAKQMPATTGRLKRIVKSKNLYLERHLG 493
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVDGVD 180
V+S I++++ N FE IA++LK+ R+E E+ V + SN DG
Sbjct: 494 HVISTIRSAIANCDAFESIAEQLKKGRLE------ELAVANMKSN-----------DGDT 536
Query: 181 ALVGTTMPHPPAYTQLKQE----PPKVGSSVAELDRNGLGSFAHPGEAIAS--------- 227
+V PA + P +VA ++ +G+ +H + S
Sbjct: 537 EMV-------PADDGNNDDDNVGPSDEHGAVASVE--NVGAASHCTGNVTSGASSVNVQL 587
Query: 228 ENKEATHISTLSSSGQSRDLNACKSPSPR-VTEAAVQALKKPNRGFGALLGNP-----KR 281
EN T + S +D+ + + V +A VQ K+P FGALLG P +
Sbjct: 588 ENPAETKSLGILSGVSGQDMEVLSNGDRKQVAKATVQVSKRPT-AFGALLGKPTSGRRQN 646
Query: 282 KFDGEKKDKEAMKLEQIKSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSGE 341
F G + K+++IKSSV LPFH+ F + + E +P+ P S +
Sbjct: 647 LFSGFSSGQN--KVDKIKSSVALPFHN-FCGGAKSPATSIPLEESVRPE---PESI---Q 697
Query: 342 QTKPIIEESNRVTVVSQSEEPAPAARPDTEDIITLEDDIDEEEQNLGNLETASAPGEDGS 401
+ P + + + + ++++ P P + + L D ++E + +P E S
Sbjct: 698 YSDPACQTEDVIQLGTETDGPQPPENHNEDGQGHLVPD---------DMEMSRSPPEHSS 748
Query: 402 AGSALEMGKQDETMSLSDLSTSFQECFHSAN--NNRKPGKPERSEEPSGFLQLKPFDFEA 459
AG+ KQ FQ S N N KP +EP QLKPFD+
Sbjct: 749 AGA-----KQ-----------RFQSLIESRNQQQNHKP-----HQEPEFNHQLKPFDYAE 787
Query: 460 ARKQIEFGEDAKEKSAGVDGNKRKPVN--SGDKKKVSAVDQAQKDDGTKELSQGRRRSAF 517
ARK I FGE E+ D + +N SGDK + S A +++G ++ +GR+ AF
Sbjct: 788 ARKNITFGERKAERIK--DNAVARAINKDSGDKGRTSNQFGAGENEGNRQNPRGRQ--AF 843
Query: 518 PATGNRSATFR 528
P +GNRSAT+
Sbjct: 844 PPSGNRSATYH 854
>gi|110739343|dbj|BAF01584.1| hypothetical protein [Arabidopsis thaliana]
Length = 377
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 98/153 (64%), Positives = 120/153 (78%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L +M KE E SD+PL EVYKRSYDVC QLYEKEL + +SYLH+YG+Q LNA QL
Sbjct: 19 MRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVYGVQTGNLNAVQL 78
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
++VAGLCEWRD IARADDESTGYVLPN+TL +IAK++P A+LRRLLKSK Y+ER
Sbjct: 79 SIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLLKSKLPYLERNFD 138
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASE 153
V+S+I+ SMQNAA FE + Q LK+ R E E
Sbjct: 139 AVISVIRRSMQNAAAFEPVVQSLKDRRPETVVE 171
>gi|145336746|ref|NP_175846.3| RRP6-like protein 1 [Arabidopsis thaliana]
gi|110741918|dbj|BAE98900.1| hypothetical protein [Arabidopsis thaliana]
gi|160892399|gb|ABX52079.1| RRP6-like protein 1 [Arabidopsis thaliana]
gi|332194981|gb|AEE33102.1| RRP6-like protein 1 [Arabidopsis thaliana]
Length = 637
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/153 (64%), Positives = 120/153 (78%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L +M KE E SD+PL EVYKRSYDVC QLYEKEL + +SYLH+YG+Q LNA QL
Sbjct: 279 MRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVYGVQTGNLNAVQL 338
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
++VAGLCEWRD IARADDESTGYVLPN+TL +IAK++P A+LRRLLKSK Y+ER
Sbjct: 339 SIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLLKSKLPYLERNFD 398
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASE 153
V+S+I+ SMQNAA FE + Q LK+ R E E
Sbjct: 399 AVISVIRRSMQNAAAFEPVVQSLKDRRPETVVE 431
>gi|334183304|ref|NP_001185222.1| RRP6-like protein 1 [Arabidopsis thaliana]
gi|332194982|gb|AEE33103.1| RRP6-like protein 1 [Arabidopsis thaliana]
Length = 639
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/153 (64%), Positives = 120/153 (78%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L +M KE E SD+PL EVYKRSYDVC QLYEKEL + +SYLH+YG+Q LNA QL
Sbjct: 279 MRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVYGVQTGNLNAVQL 338
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
++VAGLCEWRD IARADDESTGYVLPN+TL +IAK++P A+LRRLLKSK Y+ER
Sbjct: 339 SIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLLKSKLPYLERNFD 398
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASE 153
V+S+I+ SMQNAA FE + Q LK+ R E E
Sbjct: 399 AVISVIRRSMQNAAAFEPVVQSLKDRRPETVVE 431
>gi|297848030|ref|XP_002891896.1| hypothetical protein ARALYDRAFT_337734 [Arabidopsis lyrata subsp.
lyrata]
gi|297337738|gb|EFH68155.1| hypothetical protein ARALYDRAFT_337734 [Arabidopsis lyrata subsp.
lyrata]
Length = 681
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/154 (64%), Positives = 119/154 (77%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+I L +M KE E SD+PL E YK SYDVC QLYEKELL+ +SYLH YG++ LNA QL
Sbjct: 372 MRIDLHTMAKEDEQSDSPLVEAYKGSYDVCMQLYEKELLTGDSYLHTYGVRSGNLNAVQL 431
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
++VAGLCEWRD IARADDESTGYVLPN+TL +IAK +P T A+LRRLLKSKH YIER
Sbjct: 432 SIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKDMPITTAQLRRLLKSKHPYIERNFD 491
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEE 154
V+S+I+ SMQNAA FE + Q LK+ R E E+
Sbjct: 492 AVISVIRRSMQNAAAFEPVVQSLKDWRPETVVEK 525
>gi|26452498|dbj|BAC43334.1| putative nucleolar protein [Arabidopsis thaliana]
Length = 578
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 96/145 (66%), Positives = 119/145 (82%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
+K++L M K+ ++D+PL EVYKRSYDVC QLYEKELL+ENSYLH+YGLQ AG NA QL
Sbjct: 424 IKLELQRMAKDDAHTDSPLLEVYKRSYDVCTQLYEKELLTENSYLHVYGLQAAGFNAAQL 483
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
A+VAGLCEWRD IARA+DESTGYVLPN+ L+EIAK++P + KLRR+LKSKH YIER +
Sbjct: 484 AIVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPDSVGKLRRMLKSKHPYIERNVD 543
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKE 145
V+S+I+ SMQ+ A FE A LK+
Sbjct: 544 SVVSVIRQSMQHYAAFESAALSLKD 568
>gi|4585987|gb|AAD25623.1|AC005287_25 Similar to nucleolar protein [Arabidopsis thaliana]
Length = 642
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 120/155 (77%), Gaps = 2/155 (1%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L +M KE E SD+PL EVYKRSYDVC QLYEKEL + +SYLH+YG+Q LNA QL
Sbjct: 279 MRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVYGVQTGNLNAVQL 338
Query: 61 AVVA--GLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERY 118
++VA GLCEWRD IARADDESTGYVLPN+TL +IAK++P A+LRRLLKSK Y+ER
Sbjct: 339 SIVALQGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLLKSKLPYLERN 398
Query: 119 MGPVLSIIKNSMQNAANFEVIAQKLKEERMEVASE 153
V+S+I+ SMQNAA FE + Q LK+ R E E
Sbjct: 399 FDAVISVIRRSMQNAAAFEPVVQSLKDRRPETVVE 433
>gi|356571755|ref|XP_003554038.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 643
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/148 (64%), Positives = 120/148 (81%), Gaps = 1/148 (0%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+IKL ++ KESE SD PL EVYKRSYDVC QLYEKELL E+SYLHI+GL+GAG NAQQL
Sbjct: 347 MRIKLFALSKESEGSDNPLLEVYKRSYDVCMQLYEKELLKEDSYLHIWGLRGAGFNAQQL 406
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLL-KSKHSYIERYM 119
AVV+GL EWRD +ARADDE GYVLPNR ++EIA Q+P + LRR++ ++KH Y+ER +
Sbjct: 407 AVVSGLWEWRDGLARADDEGPGYVLPNRIILEIANQMPVIISNLRRIVGRTKHPYVERSL 466
Query: 120 GPVLSIIKNSMQNAANFEVIAQKLKEER 147
+++I+++SMQNAA FE A +LKEE
Sbjct: 467 DVIVNIVRHSMQNAAAFEEAALRLKEEH 494
>gi|242034371|ref|XP_002464580.1| hypothetical protein SORBIDRAFT_01g021230 [Sorghum bicolor]
gi|241918434|gb|EER91578.1| hypothetical protein SORBIDRAFT_01g021230 [Sorghum bicolor]
Length = 882
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 274/544 (50%), Gaps = 85/544 (15%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L + ES + L EV KRS ++C QLYEKE L++ SYLHI+GL+ LNA+QL
Sbjct: 408 MRLRLVN---ESSGENDLLLEVCKRSNEICLQLYEKEQLTDTSYLHIHGLKENELNARQL 464
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V++ L WRD IARA+DESTGY+LPN+TL+EIAK++P T+ KL+R++KS++ ++ER++G
Sbjct: 465 SVLSSLYRWRDGIARAEDESTGYILPNKTLLEIAKEMPVTSGKLKRIVKSRNLFLERHLG 524
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERME---VA-----SEETEVLVLDTSSNLKIPNVG 172
V++ I++++ + FE +A++LK+ ++E VA SE+ E++ N++ PN
Sbjct: 525 HVINNIRDAIAASGAFESVAEQLKKGKLEELTVADVKNSSEDIEMIPAVDVGNIEDPNDE 584
Query: 173 RESVDGVDALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKEA 232
V V VG P +G+ +E LG+ E + E K++
Sbjct: 585 SAVVSAVITNVGAA--------------PCMGTITSEA---SLGNMHL--EDVVPETKDS 625
Query: 233 THISTLSSSGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGNPK--RK---FDGEK 287
S + + L+ + + +A VQ K+P FGAL G P RK F G
Sbjct: 626 GTSSGFTGLADTEKLSNDQQ---QAAKATVQVSKRPT-AFGALFGKPAAGRKPDLFLGFP 681
Query: 288 KDKEAMKLEQIKSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSGEQTKPII 347
+ K+++I SSV LPFH ++P+ P LP S S + I
Sbjct: 682 NVQGKTKVDKITSSVVLPFHHFSG-----------GAKPSSPILPAKESLHSEPEN---I 727
Query: 348 EESNRVTVVSQSEEPAPAARPDTEDIITLEDDIDEEEQNLGNLETASAPGEDGSAGSALE 407
+ + PA R E++I L+ + DE + P E+G+ E
Sbjct: 728 QHGD------------PACR--LEEVIQLDMETDEPQ-----------PPENGNEDGHCE 762
Query: 408 MGKQDETMSLSDLSTSFQECFHSANNNRKPGKPERSEEPSGF---LQLKPFDFEAARKQI 464
+ + S SD + ++ F + N R + +++ P F + + PFD+ ARK +
Sbjct: 763 TEDTEMSKSPSDDPSGTEQRFRTLNEERNIQQNQKT--PREFELSVPVVPFDYAEARKNL 820
Query: 465 EFGEDAKEKSAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKELSQGRRRSAFPATGNRS 524
+ E+ + +SGDK+ S +D+G RRR AFP +GNRS
Sbjct: 821 VSSQPKAERRKDDAVARAINTDSGDKRIASKKPGGGEDEGN--FQHPRRRQAFPPSGNRS 878
Query: 525 ATFR 528
AT+
Sbjct: 879 ATYH 882
>gi|356514082|ref|XP_003525736.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 506
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/144 (61%), Positives = 114/144 (79%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+I+L SM KE E+ D PL EVYK SY VC +LYEKELL+E S+L IYGLQGAG NAQQL
Sbjct: 244 MRIELFSMLKEPESVDAPLVEVYKCSYKVCMRLYEKELLTEKSFLRIYGLQGAGFNAQQL 303
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
AVV+GL +WRD +AR D+STGYVLPN++++EIAKQ+P TA LR L+ S+H Y+E +
Sbjct: 304 AVVSGLFKWRDFVARVKDDSTGYVLPNKSILEIAKQMPVTANNLRLLVNSRHPYVEHNLD 363
Query: 121 PVLSIIKNSMQNAANFEVIAQKLK 144
+++II++S+QN A FE IAQ LK
Sbjct: 364 SLVNIIRHSIQNTAAFEEIAQLLK 387
>gi|124359359|gb|ABD28520.2| HRDC; Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 341
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 89/148 (60%), Positives = 118/148 (79%), Gaps = 2/148 (1%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+IKL + KESE+ D PL EVY+RSY+VC QLYEK+LL+ENS+L+I GL+GAG N QQL
Sbjct: 156 MRIKLFELSKESESPDDPLLEVYQRSYNVCMQLYEKDLLTENSFLNIKGLRGAGFNGQQL 215
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLL--KSKHSYIERY 118
AVV+GL EWRDV+ARA+DESTGY+LPN+ ++ IAK +P TA+ LRRL+ +S+ Y+ER
Sbjct: 216 AVVSGLYEWRDVLARAEDESTGYILPNKVILLIAKHMPVTASNLRRLIAERSRLPYVERN 275
Query: 119 MGPVLSIIKNSMQNAANFEVIAQKLKEE 146
V++I+++SM AA FE A +LKEE
Sbjct: 276 HDIVVNIVRHSMGKAAAFEEAALRLKEE 303
>gi|356514085|ref|XP_003525737.1| PREDICTED: LOW QUALITY PROTEIN: exosome component 10-like [Glycine
max]
Length = 429
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 109/144 (75%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+I+L SM E E+ D PL EVYK SY VC +LYEK LL+E S+L IYGLQGAG AQQL
Sbjct: 238 MRIELFSMLNEPESVDAPLVEVYKCSYKVCMRLYEKXLLTEKSFLRIYGLQGAGFTAQQL 297
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V+GL +WRD +AR D+STGYVLPN++++EIAKQ+P TA LR L+ S+H Y+E +
Sbjct: 298 VIVSGLFKWRDFVARVKDDSTGYVLPNKSILEIAKQMPVTANNLRLLVNSRHPYVEHNLD 357
Query: 121 PVLSIIKNSMQNAANFEVIAQKLK 144
++ II++S+QN + FE IAQ LK
Sbjct: 358 SLVDIIRHSIQNTSAFEEIAQLLK 381
>gi|357508795|ref|XP_003624686.1| Exosome complex exonuclease rrp6 [Medicago truncatula]
gi|355499701|gb|AES80904.1| Exosome complex exonuclease rrp6 [Medicago truncatula]
Length = 832
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 187/375 (49%), Gaps = 87/375 (23%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+IKL + KESE+ D PL EVY+RSY+VC QLYEK+LL+ENS+L+I GL+GAG N QQL
Sbjct: 454 MRIKLFELSKESESPDDPLLEVYQRSYNVCMQLYEKDLLTENSFLNIKGLRGAGFNGQQL 513
Query: 61 AVVAG-----------------------------------------------------LC 67
AVV+G L
Sbjct: 514 AVVSGKTMVGSLQPQNTLLRRGKETQANGVPKVLIMVVSDQKNKIVACIASALGFCTGLY 573
Query: 68 EWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLL--KSKHSYIERYMGPVLSI 125
EWRDV+ARA+DESTGY+LPN+ ++ IAK +P TA+ LRRL+ +S+ Y+ER V++I
Sbjct: 574 EWRDVLARAEDESTGYILPNKVILLIAKHMPVTASNLRRLIAERSRLPYVERNHDIVVNI 633
Query: 126 IKNSMQNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVDGVDALVGT 185
+++SM AA FE A +LKEE A E L L + NV SV+ GT
Sbjct: 634 VRHSMGKAAAFEEAALRLKEEH--AAFVEAAALRLKEEHAASVSNVA--SVED-----GT 684
Query: 186 TMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKEATHISTLSSSGQSR 245
P P+ + LK E GS I EN +IS S
Sbjct: 685 EAPQSPSLS-LKDECAANGS-------------------IGIENATCVNISEKSLFSSDP 724
Query: 246 DLNACKSPSPRVTEAAVQALKKPNRGFGA-LLGNPKRKFDG--EKKDKEAMKLEQIKSSV 302
+ +A K + VQALK P A LLGN + +G +KK K+ +K+EQ SS+
Sbjct: 725 NSSAVKLIGRQENGTNVQALKMPTVACDATLLGNSTSEGNGYPDKKGKKKIKVEQNVSSI 784
Query: 303 NLPFHSIFARDEQLK 317
NLP HS +E+ K
Sbjct: 785 NLPSHSFLGNNEKSK 799
>gi|293332135|ref|NP_001169203.1| uncharacterized protein LOC100383056 [Zea mays]
gi|223975495|gb|ACN31935.1| unknown [Zea mays]
Length = 475
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 169/539 (31%), Positives = 258/539 (47%), Gaps = 109/539 (20%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L EV KRS ++C QLYEKE L++ SYLHI+GL+ LNA QL+V++ L WRD IARA+D
Sbjct: 16 LLEVCKRSNEICLQLYEKEQLTDTSYLHIHGLKENELNATQLSVLSSLYRWRDGIARAED 75
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAANFEV 138
ESTGY+LPN+TL+EIAK++P T+ KL+R++KS++S +ER + V++ I++++ + FE
Sbjct: 76 ESTGYILPNKTLLEIAKEMPVTSGKLKRMIKSRNSILERNLNHVINNIRDAIAASGAFES 135
Query: 139 IAQKLKEERME--------VASEETEVLVLDTSSNLKIPNVGRESVDGVDALVGTTMPHP 190
I ++LK+ ++E +SE+TE++ N++ P+ V V VG
Sbjct: 136 IVEQLKKGKLEELTLADVKNSSEDTEMIPAVDVDNIEDPSDESAVVPAVITNVGAA---- 191
Query: 191 PAYT--------QLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKEATHISTLSSSG 242
P T L+ PK S A GL ++NK+ LS+
Sbjct: 192 PCITSEASLGNMHLEDPVPKTKDSGASSGFTGL-----------TDNKK------LSNDQ 234
Query: 243 QSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGNPK--RK---FDGEKKDKEAMKLEQ 297
Q + +A VQ K+P FGAL G R+ F G + K+++
Sbjct: 235 Q------------QAAKATVQVSKRPT-AFGALFGKAAAGRRPDLFLGFSNVQGKTKVDK 281
Query: 298 IKSSVNLPFHSIFARDEQLKPVDVMKSEPNKPDLPFPSSFGSGEQTKPIIEESNRVTVVS 357
I SSV LPFH F+ +L + LP S S + I+ S+
Sbjct: 282 ITSSVVLPFHH-FSGGAKL----------SSAALPAKESLHSEPDS---IQHSD------ 321
Query: 358 QSEEPAPAARPDTEDIITLEDDIDEEEQNLGNLETASAPGEDGSAGSALEMGKQDETMSL 417
PA + E++I L+ DE++ P E+G+ +D MS
Sbjct: 322 ------PACQ--LEEVIQLDMGTDEQQ-----------PPENGNEDDG-HCETEDTEMSK 361
Query: 418 S---DLSTSFQECFHSANNNRKPGKPERSEEPSGF-LQLKPFDFEAARKQIEFGEDAKEK 473
S D S + Q F S N R + +++ F + + PFD+ ARK + E+
Sbjct: 362 SPSGDPSVTEQR-FRSLNEERNVKQNQKTPREFEFSVPVVPFDYAEARKNLVSSLPKAER 420
Query: 474 SAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKE----LSQGRRRSAFPATGNRSATFR 528
+ ++GDK++ S +K G E RRR AFP +GNR+AT+
Sbjct: 421 RKDDAVARAINTDAGDKQRGS-----KKPPGGGENEGNFQHPRRRQAFPPSGNRNATYH 474
>gi|414871320|tpg|DAA49877.1| TPA: hypothetical protein ZEAMMB73_153639 [Zea mays]
Length = 901
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 258/544 (47%), Gaps = 119/544 (21%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L EV KRS ++C QLYEKE L++ SYLHI+GL+ LNA QL+V++ L WRD IARA+D
Sbjct: 442 LLEVCKRSNEICLQLYEKEQLTDTSYLHIHGLKENELNATQLSVLSSLYRWRDGIARAED 501
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAANFEV 138
ESTGY+LPN+TL+EIAK++P T+ KL+R++KS++S +ER + V++ I++++ + FE
Sbjct: 502 ESTGYILPNKTLLEIAKEMPVTSGKLKRMIKSRNSILERNLNHVINNIRDAIAASGAFES 561
Query: 139 IAQKLKEERME--------VASEETEVLVLDTSSNLKIPNVGRESVDGVDALVGTTMPHP 190
I ++LK+ ++E +SE+TE++ N++ P+ V V VG
Sbjct: 562 IVEQLKKGKLEELTLADVKNSSEDTEMIPAVDVDNIEDPSDESAVVPAVITNVGAA---- 617
Query: 191 PAYT--------QLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKEATHISTLSSSG 242
P T L+ PK S A GL ++NK+ LS+
Sbjct: 618 PCITSEASLGNMHLEDPVPKTKDSGASSGFTGL-----------TDNKK------LSNDQ 660
Query: 243 QSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGNPK--RK---FDGEKKDKEAMKLEQ 297
Q + +A VQ K+P FGAL G R+ F G + K+++
Sbjct: 661 Q------------QAAKATVQVSKRPT-AFGALFGKAAAGRRPDLFLGFSNVQGKTKVDK 707
Query: 298 IKSSVNLPFHSIFARDEQLKPVDV-----MKSEPNKPDLPFPSSFGSGEQTKPIIEESNR 352
I SSV LPFH F+ +L + + SEP+ I+ S+
Sbjct: 708 ITSSVVLPFHH-FSGGAKLSSAALPAKESLHSEPDS------------------IQHSD- 747
Query: 353 VTVVSQSEEPAPAARPDTEDIITLEDDIDEEEQNLGNLETASAPGEDGSAGSALEMGKQD 412
PA + E++I L+ DE++ P E+G+ +D
Sbjct: 748 -----------PACQ--LEEVIQLDMGTDEQQ-----------PPENGNEDDG-HCETED 782
Query: 413 ETMSLS---DLSTSFQECFHSANNNRKPGKPERSEEPSGF-LQLKPFDFEAARKQIEFGE 468
MS S D S + Q F S N R + +++ F + + PFD+ ARK +
Sbjct: 783 TEMSKSPSGDPSVTEQR-FRSLNEERNVKQNQKTPREFEFSVPVVPFDYAEARKNLVSSL 841
Query: 469 DAKEKSAGVDGNKRKPVNSGDKKKVSAVDQAQKDDGTKE----LSQGRRRSAFPATGNRS 524
E+ + ++GDK++ S +K G E RRR AFP +GNR+
Sbjct: 842 PKAERRKDDAVARAINTDAGDKQRGS-----KKPPGGGENEGNFQHPRRRQAFPPSGNRN 896
Query: 525 ATFR 528
AT+
Sbjct: 897 ATYH 900
>gi|326502996|dbj|BAJ99123.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/312 (38%), Positives = 171/312 (54%), Gaps = 27/312 (8%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L +ES + + L EV KRS D+C QLYEKELL++ SYLHIYGLQ L A QL
Sbjct: 197 MRLRLQ---RESTSENDLLLEVQKRSNDICLQLYEKELLTDKSYLHIYGLQEHELTAAQL 253
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
AVV+ L +WRD IAR DESTGYVLPN+ LIEIAK++PTT A LRR++KSK+ ++
Sbjct: 254 AVVSALHQWRDYIARDQDESTGYVLPNKALIEIAKKMPTTTADLRRIVKSKYPCVDDNFD 313
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIP-----NVGRES 175
+L + N+ +N+ FE IA++LK+ R+ ++ +LDT +++ NVG S
Sbjct: 314 LILDTVWNATENSGAFEAIAEQLKKVRLGELDLKS---ILDTGEVIEMAPSDADNVGI-S 369
Query: 176 VDGVDALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAI-ASENKEATH 234
D D P + ++ S + + G I +SENK +
Sbjct: 370 FDPADQYSLA----PSSTANIRVTSNSRDSFMTDGTLTGSIWLHDKTSTIPSSENKTSWS 425
Query: 235 ISTLSSSGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGNPKR-----KFDGEKKD 289
+S L+ S + + T AAV+ LK+P FGAL+GN F G +
Sbjct: 426 LSGLTGPSNKE----VMSNNKQETHAAVEELKRP-MPFGALVGNSTYGRQTDYFGGFPNE 480
Query: 290 KEAMKLEQIKSS 301
+ L+QI+SS
Sbjct: 481 QAQSGLDQIQSS 492
>gi|326496869|dbj|BAJ98461.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 524
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/312 (38%), Positives = 172/312 (55%), Gaps = 27/312 (8%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L +ES + + L EV KRS D+C QLYEKELL++ SYLHIYGLQ L A QL
Sbjct: 129 MRLRLQ---RESTSENDLLLEVQKRSNDICLQLYEKELLTDKSYLHIYGLQEHELTAAQL 185
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
AVV+ L +WRD IAR DESTGYVLPN+ LIEIAK++PTT A LRR++KSK+ ++
Sbjct: 186 AVVSALHQWRDYIARDQDESTGYVLPNKALIEIAKKMPTTTADLRRIVKSKYPCVDDNFD 245
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIP-----NVGRES 175
+L + N+ +N+ FE IA++LK+ R+ ++ +LDT +++ NVG S
Sbjct: 246 LILDTVWNATENSGAFEAIAEQLKKVRLGELDLKS---ILDTGEVIEMAPSDADNVGI-S 301
Query: 176 VDGVDALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAI-ASENKEATH 234
D D P + ++ S + + G I +SENK +
Sbjct: 302 FDPADQYSLA----PSSTANIRVTSNSRDSFMTDGTLTGSIWLHDKTSTIPSSENKTSWS 357
Query: 235 ISTLSSSGQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGNPKR-----KFDGEKKD 289
+S L+ + S + + T AAV+ LK+P FGAL+GN F G +
Sbjct: 358 LSGLTGPSNKEVM----SNNKQETHAAVEELKRP-MPFGALVGNSTYGRQTDYFGGFPNE 412
Query: 290 KEAMKLEQIKSS 301
+ L+QI+SS
Sbjct: 413 QAQSGLDQIQSS 424
>gi|115450833|ref|NP_001049017.1| Os03g0157800 [Oryza sativa Japonica Group]
gi|108706273|gb|ABF94068.1| 3'-5' exonuclease family protein, expressed [Oryza sativa Japonica
Group]
gi|113547488|dbj|BAF10931.1| Os03g0157800 [Oryza sativa Japonica Group]
gi|215695202|dbj|BAG90393.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624215|gb|EEE58347.1| hypothetical protein OsJ_09469 [Oryza sativa Japonica Group]
Length = 600
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 149/233 (63%), Gaps = 16/233 (6%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L KES + + L EV KRS ++C QLYEKELL++ SYLHIYGLQ L+A+QL
Sbjct: 309 MRLRLQ---KESTSDNDLLLEVQKRSNEICLQLYEKELLTDTSYLHIYGLQEHDLDAKQL 365
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
AVV L +WRD IAR DESTGYVLPN+ LIEIAK++PT A+L+R++KSK+ +++ +
Sbjct: 366 AVVYALHQWRDYIAREVDESTGYVLPNKALIEIAKKMPTDTAELKRMVKSKYPFVDENLD 425
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLV---LDTSSNL--KIPNVGRES 175
V+ II N+ +++ FE A++LK+ER+E ++ + + + TS NL +I ++ +E
Sbjct: 426 QVVGIIWNATESSYAFESRAEQLKKERLEQLTDRVQTISSPEMKTSMNLSGQIRSMDKEI 485
Query: 176 V-DGVDALVGTTMPHPPAYTQLKQEPP--KVGSSVAELDRNGLGSFAHPGEAI 225
+ D + V + +LK+ VG+S + R+ G F++ E +
Sbjct: 486 LSDNIHQQVAQA-----TFQELKRPMALGAVGNSTSGGQRDFFGGFSNKSEKM 533
>gi|218192123|gb|EEC74550.1| hypothetical protein OsI_10088 [Oryza sativa Indica Group]
Length = 599
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 149/233 (63%), Gaps = 16/233 (6%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L KES + + L EV KRS ++C QLYEKELL++ SYLHIYGLQ L+A+QL
Sbjct: 308 MRLRLQ---KESTSDNDLLLEVQKRSNEICLQLYEKELLTDTSYLHIYGLQEHDLDAKQL 364
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
AVV L +WRD IAR DESTGYVLPN+ LIEIAK++PT A+L+R++KSK+ +++ +
Sbjct: 365 AVVYALHQWRDYIAREVDESTGYVLPNKALIEIAKKMPTDTAELKRMVKSKYPFVDENLD 424
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLV---LDTSSNL--KIPNVGRES 175
V+ II N+ +++ FE A++LK+ER+E ++ + + + TS NL +I ++ +E
Sbjct: 425 QVVGIIWNATESSYAFESRAEQLKKERLEQLTDRVQTISSPEMKTSMNLSGQIRSMDKEI 484
Query: 176 V-DGVDALVGTTMPHPPAYTQLKQEPP--KVGSSVAELDRNGLGSFAHPGEAI 225
+ D + V + +LK+ +G+S + R+ G F++ E +
Sbjct: 485 LSDNIHQQVAQA-----TFQELKRPMALGAIGNSTSGGQRDFFGGFSNKSEKM 532
>gi|414864886|tpg|DAA43443.1| TPA: hypothetical protein ZEAMMB73_373944 [Zea mays]
Length = 352
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 106/142 (74%)
Query: 8 MPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLC 67
+ +ES + L EV+KRS ++C Q YEKELL++ SYLHIYGLQ L+A+QLAVVA L
Sbjct: 5 LQRESTFENDLLLEVHKRSNEICLQFYEKELLTDTSYLHIYGLQEHELDARQLAVVAALH 64
Query: 68 EWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIK 127
EWRD IAR +DESTGY+LPN+ LIEIAKQ+PT L+R++KSK+ Y+E + + +
Sbjct: 65 EWRDRIARQEDESTGYILPNKALIEIAKQMPTDVGHLKRIVKSKYPYVESNLELIAYTVW 124
Query: 128 NSMQNAANFEVIAQKLKEERME 149
N+++ + FE IA++LK+ER+E
Sbjct: 125 NALEYSYAFEGIAEQLKKERLE 146
>gi|293334443|ref|NP_001170525.1| uncharacterized protein LOC100384536 [Zea mays]
gi|238005848|gb|ACR33959.1| unknown [Zea mays]
gi|414864884|tpg|DAA43441.1| TPA: hypothetical protein ZEAMMB73_373944 [Zea mays]
Length = 666
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 163/303 (53%), Gaps = 41/303 (13%)
Query: 8 MPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLC 67
+ +ES + L EV+KRS ++C Q YEKELL++ SYLHIYGLQ L+A+QLAVVA L
Sbjct: 319 LQRESTFENDLLLEVHKRSNEICLQFYEKELLTDTSYLHIYGLQEHELDARQLAVVAALH 378
Query: 68 EWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIK 127
EWRD IAR +DESTGY+LPN+ LIEIAKQ+PT L+R++KSK+ Y+E + + +
Sbjct: 379 EWRDRIARQEDESTGYILPNKALIEIAKQMPTDVGHLKRIVKSKYPYVESNLELIAYTVW 438
Query: 128 NSMQNAANFEVIAQKLKEERMEVASEET-----EVLVLDTSSNLKIPNVGRESVDGVDAL 182
N+++ + FE IA++LK+ER+E + ++ EV LD ++ R + D D
Sbjct: 439 NALEYSYAFEGIAEQLKKERLEQVALKSGQTSDEVTPLDA-------DIDRSNFDSSDQ- 490
Query: 183 VGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKEATHISTLSSS- 241
+VA R G S A +I E+K T S +S
Sbjct: 491 -------------------SANVNVASGSRAGFMSEAALISSIHLEDKTQTMSSVKTSQT 531
Query: 242 --GQSRDLNACKSPSPRVTEAAVQALKKPNRGFGALLGNPKRKFDGEKKDKEAMKLEQIK 299
GQ R +N S + + A+Q L + AL GN GE ++ + +E +
Sbjct: 532 LLGQIRPVNK-DVLSNNIHQQAIQDL---SLTLKALKGNLAS--GGESNEQAGINVENFR 585
Query: 300 SSV 302
SSV
Sbjct: 586 SSV 588
>gi|242042163|ref|XP_002468476.1| hypothetical protein SORBIDRAFT_01g046585 [Sorghum bicolor]
gi|241922330|gb|EER95474.1| hypothetical protein SORBIDRAFT_01g046585 [Sorghum bicolor]
Length = 702
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 120/178 (67%), Gaps = 12/178 (6%)
Query: 8 MPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLC 67
+ KES + L EV+KRS ++C Q YEKELL++ SYLHIYGLQ L+A+QLAVVA L
Sbjct: 319 LQKESTFENDLLLEVHKRSNEICLQFYEKELLTDTSYLHIYGLQEHELDAKQLAVVAALH 378
Query: 68 EWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIK 127
EWRD IAR +DESTGY+LPN+ LIEIAKQ+PT L+R++KSK+ Y+E + + +
Sbjct: 379 EWRDSIARQEDESTGYILPNKALIEIAKQMPTDVGHLKRIVKSKYPYVESNLELIAYTVW 438
Query: 128 NSMQNAANFEVIAQKLKEERMEVASEET-----EVLVLDTSSNLKIPNVGRESVDGVD 180
N+++ + +E IA++LK+ER+E + ++ EV LD ++GR + D D
Sbjct: 439 NALKYSYAYEGIAEQLKKERLEQLALKSGQASDEVTPLDA-------DIGRSNFDSSD 489
>gi|414864885|tpg|DAA43442.1| TPA: hypothetical protein ZEAMMB73_373944 [Zea mays]
Length = 577
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 106/142 (74%)
Query: 8 MPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLC 67
+ +ES + L EV+KRS ++C Q YEKELL++ SYLHIYGLQ L+A+QLAVVA L
Sbjct: 319 LQRESTFENDLLLEVHKRSNEICLQFYEKELLTDTSYLHIYGLQEHELDARQLAVVAALH 378
Query: 68 EWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIK 127
EWRD IAR +DESTGY+LPN+ LIEIAKQ+PT L+R++KSK+ Y+E + + +
Sbjct: 379 EWRDRIARQEDESTGYILPNKALIEIAKQMPTDVGHLKRIVKSKYPYVESNLELIAYTVW 438
Query: 128 NSMQNAANFEVIAQKLKEERME 149
N+++ + FE IA++LK+ER+E
Sbjct: 439 NALEYSYAFEGIAEQLKKERLE 460
>gi|357120688|ref|XP_003562057.1| PREDICTED: exosome component 10-like [Brachypodium distachyon]
Length = 690
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 108/148 (72%), Gaps = 3/148 (2%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
M+++L KES + L EV RS ++C QLYEKELL++ SYLHIYGLQ L A QL
Sbjct: 315 MRLRLQ---KESTCENDLLLEVQNRSNEICLQLYEKELLTDTSYLHIYGLQEHELEAAQL 371
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
AVV+ L +WRD AR +DESTGYVLPN+ LIEIAK++PT+ A+L+R++KSK+ ++E
Sbjct: 372 AVVSALHQWRDYTARQEDESTGYVLPNKALIEIAKKMPTSTAELQRIVKSKYPFVEANFD 431
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERM 148
+L I+ N+ +N+ FE IA++LK+ R+
Sbjct: 432 VILDIVWNATENSEAFEAIAEQLKKARL 459
>gi|21397264|gb|AAM51828.1|AC105730_2 Putative nucleolar protein [Oryza sativa Japonica Group]
gi|22773226|gb|AAN06832.1| Putative nucleolar protein [Oryza sativa Japonica Group]
Length = 523
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 138/213 (64%), Gaps = 13/213 (6%)
Query: 21 EVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDES 80
+V KRS ++C QLYEKELL++ SYLHIYGLQ L+A+QLAVV L +WRD IAR DES
Sbjct: 249 QVQKRSNEICLQLYEKELLTDTSYLHIYGLQEHDLDAKQLAVVYALHQWRDYIAREVDES 308
Query: 81 TGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAANFEVIA 140
TGYVLPN+ LIEIAK++PT A+L+R++KSK+ +++ + V+ II N+ +++ FE A
Sbjct: 309 TGYVLPNKALIEIAKKMPTDTAELKRMVKSKYPFVDENLDQVVGIIWNATESSYAFESRA 368
Query: 141 QKLKEERMEVASEETEVLV---LDTSSNL--KIPNVGRESV-DGVDALVGTTMPHPPAYT 194
++LK+ER+E ++ + + + TS NL +I ++ +E + D + V +
Sbjct: 369 EQLKKERLEQLTDRVQTISSPEMKTSMNLSGQIRSMDKEILSDNIHQQVAQA-----TFQ 423
Query: 195 QLKQEPP--KVGSSVAELDRNGLGSFAHPGEAI 225
+LK+ VG+S + R+ G F++ E +
Sbjct: 424 ELKRPMALGAVGNSTSGGQRDFFGGFSNKSEKM 456
>gi|242039749|ref|XP_002467269.1| hypothetical protein SORBIDRAFT_01g022350 [Sorghum bicolor]
gi|241921123|gb|EER94267.1| hypothetical protein SORBIDRAFT_01g022350 [Sorghum bicolor]
Length = 284
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 103/162 (63%), Gaps = 20/162 (12%)
Query: 8 MPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLC 67
+ +ES + L EV+KRS ++C Q YEKELL++ SYLHIYGLQ L+A+QLAVVA L
Sbjct: 31 LQRESTFENDLLLEVHKRSNEICLQFYEKELLTDTSYLHIYGLQEHELDAKQLAVVAALH 90
Query: 68 EWRDVIARADDESTGYVLPNRTLIEI--------------------AKQLPTTAAKLRRL 107
EWRD IAR +DESTGY+LPN+ + + AKQ+PT L+R+
Sbjct: 91 EWRDSIARQEDESTGYILPNKAFLLLWCKIRYATSLTPPPLFFNSKAKQMPTDVGHLKRI 150
Query: 108 LKSKHSYIERYMGPVLSIIKNSMQNAANFEVIAQKLKEERME 149
+KSK Y+E + + + N+++ + FE IA++LK+ER+E
Sbjct: 151 VKSKCPYVESNLELIAYTVWNALKYSYAFEGIAEQLKKERLE 192
>gi|168065993|ref|XP_001784929.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663516|gb|EDQ50276.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 515
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
Query: 2 KIKLSSMPKESEN-SDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQL 60
++ L SM + N +D P+ +VYKRS D+C ++Y+K++L+E SYL +YGLQ N++Q+
Sbjct: 388 RVVLVSMRSTAGNDADDPVLQVYKRSRDICLKMYKKDILTETSYLSLYGLQDKNFNSEQM 447
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V+AGL WRD +AR DESTG+VLPN+ L ++A+++P TA L+ ++ HS + +Y
Sbjct: 448 SVLAGLYAWRDNLARKLDESTGFVLPNQLLYKLAEEMPDTARTLQIAIRGPHSVVGQYTA 507
Query: 121 PVLSIIK 127
VL +I+
Sbjct: 508 EVLEVIR 514
>gi|302776536|ref|XP_002971426.1| hypothetical protein SELMODRAFT_95804 [Selaginella moellendorffii]
gi|300160558|gb|EFJ27175.1| hypothetical protein SELMODRAFT_95804 [Selaginella moellendorffii]
Length = 512
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 83/126 (65%)
Query: 4 KLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVV 63
K+ M +++E ++ EV +RS D+C QLYEKEL +E+S+LHIYGL L ++LA+V
Sbjct: 387 KMKGMLRDAETTEDLYLEVCQRSRDLCLQLYEKELFTESSFLHIYGLAEKNLTPEKLAIV 446
Query: 64 AGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVL 123
AGL WRD + R++DESTGY+LPN L +A+ P A +L+ +L+ H + +L
Sbjct: 447 AGLYAWRDKLCRSEDESTGYILPNSLLFRLAEDAPQDAKRLQGILRRGHPVAAFHSAALL 506
Query: 124 SIIKNS 129
+I+++
Sbjct: 507 KVIRDA 512
>gi|302765286|ref|XP_002966064.1| hypothetical protein SELMODRAFT_84661 [Selaginella moellendorffii]
gi|300166878|gb|EFJ33484.1| hypothetical protein SELMODRAFT_84661 [Selaginella moellendorffii]
Length = 512
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 82/126 (65%)
Query: 4 KLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVV 63
K+ + +++E ++ EV +RS D+C QLYEKEL +E+S+LHIYGL L ++LA+V
Sbjct: 387 KMKGLLRDAETTEDLYLEVCQRSRDLCLQLYEKELFTESSFLHIYGLAEKNLTPEKLAIV 446
Query: 64 AGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVL 123
AGL WRD + R++DESTGY+LPN L +A+ P +L+ +L+ H + +L
Sbjct: 447 AGLYAWRDKLCRSEDESTGYILPNSLLFRLAEDAPQDVKRLQGILRRGHPVAAFHSAALL 506
Query: 124 SIIKNS 129
+I+++
Sbjct: 507 KVIRDA 512
>gi|242079315|ref|XP_002444426.1| hypothetical protein SORBIDRAFT_07g021745 [Sorghum bicolor]
gi|241940776|gb|EES13921.1| hypothetical protein SORBIDRAFT_07g021745 [Sorghum bicolor]
Length = 112
Score = 112 bits (279), Expect = 7e-22, Method: Composition-based stats.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 8 MPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLC 67
+ +ES + L EV+KRS ++C Q YEKELL++ SYLHIYGL+ L+A+QLAVVA L
Sbjct: 25 LQRESTFENNLLLEVHKRSNEICLQFYEKELLTDTSYLHIYGLREHELDAKQLAVVAALH 84
Query: 68 EWRDVIARADDESTGYVLPNRTLIEIA 94
EWRD IAR +DESTGY+LPN+ LIEI
Sbjct: 85 EWRDSIARQEDESTGYILPNKALIEIG 111
>gi|414871321|tpg|DAA49878.1| TPA: hypothetical protein ZEAMMB73_153639 [Zea mays]
Length = 532
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 57/71 (80%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L EV KRS ++C QLYEKE L++ SYLHI+GL+ LNA QL+V++ L WRD IARA+D
Sbjct: 442 LLEVCKRSNEICLQLYEKEQLTDTSYLHIHGLKENELNATQLSVLSSLYRWRDGIARAED 501
Query: 79 ESTGYVLPNRT 89
ESTGY+LPN+T
Sbjct: 502 ESTGYILPNKT 512
>gi|449268441|gb|EMC79305.1| Exosome component 10, partial [Columba livia]
Length = 829
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 17 TPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARA 76
T L V++RS D+C + Y K L S+ SYL +Y Q LN QQLA L WRD +AR
Sbjct: 429 TQLQVVWQRSRDICLKKYIKPLFSDESYLELYRRQKKHLNTQQLAAFRLLFAWRDKMARQ 488
Query: 77 DDESTGYVLPNRTLIEIAKQLP 98
+DESTGYVLPN L++IA++LP
Sbjct: 489 EDESTGYVLPNHMLLKIAEELP 510
>gi|71051605|ref|NP_001012748.1| exosome component 10 [Gallus gallus]
Length = 910
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 53/82 (64%)
Query: 17 TPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARA 76
T L V++RS D+C + Y K L S+ SYL +Y Q LN QQLA L WRD AR
Sbjct: 482 TQLKVVWQRSRDICLKKYIKPLFSDESYLELYRRQKKHLNTQQLAAFRLLFSWRDKTARQ 541
Query: 77 DDESTGYVLPNRTLIEIAKQLP 98
+DES GYVLPN L++IA++LP
Sbjct: 542 EDESIGYVLPNHMLLKIAEELP 563
>gi|148237165|ref|NP_001084822.1| exosome component 10 [Xenopus laevis]
gi|47124776|gb|AAH70757.1| MGC83774 protein [Xenopus laevis]
Length = 883
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 53/80 (66%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + +E SYL +Y Q LN QQL L WRD IAR +D
Sbjct: 462 LQLVWQRSKDICLKRFTKLIFTEESYLDLYQKQKKHLNTQQLTAFRLLFAWRDKIARRED 521
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGYVLPN L++IA++LP
Sbjct: 522 ESTGYVLPNHMLMKIAEELP 541
>gi|45708813|gb|AAH67962.1| exosome component 10 [Xenopus (Silurana) tropicalis]
Length = 883
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V+++S D+C + + K + +E+SYL +Y Q LN QQL L WRD IAR +D
Sbjct: 462 LQLVWQKSRDICLKKFTKSIFTEDSYLELYQKQKKHLNTQQLTAFRLLFAWRDKIARQED 521
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGYVLPN L++I ++LP
Sbjct: 522 ESTGYVLPNHMLLKITEELP 541
>gi|348041370|ref|NP_998833.2| exosome component 10 [Xenopus (Silurana) tropicalis]
Length = 890
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V+++S D+C + + K + +E+SYL +Y Q LN QQL L WRD IAR +D
Sbjct: 469 LQLVWQKSRDICLKKFTKSIFTEDSYLELYQKQKKHLNTQQLTAFRLLFAWRDKIARQED 528
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGYVLPN L++I ++LP
Sbjct: 529 ESTGYVLPNHMLLKITEELP 548
>gi|326932437|ref|XP_003212324.1| PREDICTED: exosome component 10-like [Meleagris gallopavo]
Length = 888
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 52/82 (63%)
Query: 17 TPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARA 76
T L V++RS D+C + Y K L S+ SYL +Y Q LN QQL L WRD AR
Sbjct: 460 TQLKVVWQRSRDICLKKYIKPLFSDESYLELYRRQKRHLNTQQLTAFRLLFSWRDKTARQ 519
Query: 77 DDESTGYVLPNRTLIEIAKQLP 98
+DES GYVLPN L++IA++LP
Sbjct: 520 EDESIGYVLPNHMLLKIAEELP 541
>gi|327291874|ref|XP_003230645.1| PREDICTED: exosome component 10-like, partial [Anolis carolinensis]
Length = 329
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 54/80 (67%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + Y K + +ENSYL +Y Q LN QQ+ L WRD +AR +D
Sbjct: 250 LQVVWQRSRDICLKKYLKPIFTENSYLELYRKQKKHLNTQQMTAFKLLFAWRDKMARQED 309
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGYVLPN L++I+++LP
Sbjct: 310 ESTGYVLPNHMLLKISEELP 329
>gi|405972152|gb|EKC36938.1| Exosome component 10 [Crassostrea gigas]
Length = 826
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 12/119 (10%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V +RS ++C ++Y+K++ E+SYL +Y N++QL + L +WRD +AR +D
Sbjct: 431 LLSVLQRSTEICAKVYKKQVFKEDSYLELYRKSKKVFNSRQLQALQKLYQWRDKLARQED 490
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKL-----------RRLLKSKHSYI-ERYMGPVLSI 125
ESTGYVLPN +++IA LP + R+ L HS+I E P+L +
Sbjct: 491 ESTGYVLPNHMILQIADILPREQQGIFACCNPIPPLVRQFLPEIHSFILEAREAPLLKV 549
>gi|354502292|ref|XP_003513221.1| PREDICTED: exosome component 10 isoform 2 [Cricetulus griseus]
Length = 860
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQLA L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLAAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|354502290|ref|XP_003513220.1| PREDICTED: exosome component 10 isoform 1 [Cricetulus griseus]
Length = 885
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQLA L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLAAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|156361913|ref|XP_001625528.1| predicted protein [Nematostella vectensis]
gi|156212365|gb|EDO33428.1| predicted protein [Nematostella vectensis]
Length = 552
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 49/80 (61%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY RS +VC++ YEK L + SY+++Y Q LN QL L WRD IAR +D
Sbjct: 428 LLSVYSRSTEVCQKHYEKPLFTSESYMNLYTKQRRPLNPVQLRAFRALYAWRDTIARRED 487
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN L IA+ LP
Sbjct: 488 ESYGYVLPNHMLFTIAETLP 507
>gi|351713711|gb|EHB16630.1| Exosome component 10 [Heterocephalus glaber]
Length = 882
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 17 TPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARA 76
T L V++RS D+C + + K + ++ SYL +Y Q LN+QQL L WRD AR
Sbjct: 464 TQLQAVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFSWRDKTARR 523
Query: 77 DDESTGYVLPNRTLIEIAKQLP 98
+DES GYVLPN +++IA++LP
Sbjct: 524 EDESFGYVLPNHMMLKIAEELP 545
>gi|395521908|ref|XP_003765056.1| PREDICTED: exosome component 10 [Sarcophilus harrisii]
Length = 992
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + +E+SYL +Y Q LN QQL L WRD AR +D
Sbjct: 573 LQVVWQRSKDICLKKFIKPIFTEDSYLELYRKQKKHLNTQQLTAFQLLYSWRDRTARRED 632
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 633 ESYGYVLPNHMMLKIAEELP 652
>gi|359319089|ref|XP_003638993.1| PREDICTED: exosome component 10 isoform 1 [Canis lupus familiaris]
Length = 861
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K L ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFVKPLFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|359319087|ref|XP_535408.4| PREDICTED: exosome component 10 isoform 2 [Canis lupus familiaris]
Length = 886
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K L ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFVKPLFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|296206702|ref|XP_002750328.1| PREDICTED: exosome component 10 isoform 2 [Callithrix jacchus]
Length = 885
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQLA L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLAAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|296206700|ref|XP_002750327.1| PREDICTED: exosome component 10 isoform 1 [Callithrix jacchus]
Length = 860
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQLA L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLAAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|426239734|ref|XP_004013774.1| PREDICTED: exosome component 10 isoform 1 [Ovis aries]
Length = 887
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 17 TPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARA 76
T L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR
Sbjct: 464 TQLQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARR 523
Query: 77 DDESTGYVLPNRTLIEIAKQLP 98
+DES GYVLPN +++IA++LP
Sbjct: 524 EDESYGYVLPNHMMLKIAEELP 545
>gi|126328718|ref|XP_001364197.1| PREDICTED: exosome component 10 isoform 1 [Monodelphis domestica]
Length = 861
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + E+SYL +Y Q LN QQL L WRD AR +D
Sbjct: 442 LQVVWQRSKDICLKRFIKPIFMEDSYLELYRKQKKHLNTQQLTAFQLLYSWRDRTARRED 501
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 502 ESYGYVLPNHMMLKIAEELP 521
>gi|426239736|ref|XP_004013775.1| PREDICTED: exosome component 10 isoform 2 [Ovis aries]
Length = 862
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 17 TPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARA 76
T L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR
Sbjct: 464 TQLQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARR 523
Query: 77 DDESTGYVLPNRTLIEIAKQLP 98
+DES GYVLPN +++IA++LP
Sbjct: 524 EDESYGYVLPNHMMLKIAEELP 545
>gi|126328720|ref|XP_001364275.1| PREDICTED: exosome component 10 isoform 2 [Monodelphis domestica]
Length = 836
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + E+SYL +Y Q LN QQL L WRD AR +D
Sbjct: 442 LQVVWQRSKDICLKRFIKPIFMEDSYLELYRKQKKHLNTQQLTAFQLLYSWRDRTARRED 501
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 502 ESYGYVLPNHMMLKIAEELP 521
>gi|426327783|ref|XP_004024690.1| PREDICTED: exosome component 10 [Gorilla gorilla gorilla]
Length = 909
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K L ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 490 LQVVWQRSRDICLKKFIKPLFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 549
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 550 ESYGYVLPNHMMLKIAEELP 569
>gi|260790959|ref|XP_002590508.1| hypothetical protein BRAFLDRAFT_124507 [Branchiostoma floridae]
gi|229275702|gb|EEN46519.1| hypothetical protein BRAFLDRAFT_124507 [Branchiostoma floridae]
Length = 832
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L +RS VC Q Y+K L +E+SYL++ N+QQL V + WRD IAR +D
Sbjct: 451 LHNTLERSRQVCLQRYQKLLYTEDSYLNLLNKHKKTFNSQQLHAVRLVYRWRDTIARQED 510
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGYVLPN L+ +A+ LP
Sbjct: 511 ESTGYVLPNHMLLVLAETLP 530
>gi|149695529|ref|XP_001492550.1| PREDICTED: exosome component 10 isoform 1 [Equus caballus]
Length = 886
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS DVC + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDVCLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|13278238|gb|AAH03952.1| Exosc10 protein, partial [Mus musculus]
Length = 517
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQL L WRD AR +D
Sbjct: 96 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARRED 155
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 156 ESYGYVLPNHMMLKIAEELP 175
>gi|338722160|ref|XP_003364495.1| PREDICTED: exosome component 10 isoform 2 [Equus caballus]
Length = 861
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS DVC + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDVCLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|392340770|ref|XP_003754164.1| PREDICTED: exosome component 10-like isoform 1 [Rattus norvegicus]
gi|392348528|ref|XP_003750136.1| PREDICTED: exosome component 10-like isoform 1 [Rattus norvegicus]
gi|149024626|gb|EDL81123.1| rCG30986, isoform CRA_a [Rattus norvegicus]
Length = 885
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|6018165|gb|AAF01779.1|AF091392_1 P100 polymyositis-scleroderma overlap syndrome associated
autoantigen homolog [Mus musculus]
gi|74184429|dbj|BAE25741.1| unnamed protein product [Mus musculus]
gi|148682877|gb|EDL14824.1| exosome component 10, isoform CRA_c [Mus musculus]
Length = 887
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|345327688|ref|XP_003431189.1| PREDICTED: exosome component 10 [Ornithorhynchus anatinus]
Length = 864
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + +E SYL +Y LN QQL L WRD AR +D
Sbjct: 439 LQVVWQRSKDICLKRFIKPIFTEESYLELYKKHKKHLNTQQLTAFQLLFSWRDKTARKED 498
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 499 ESFGYVLPNHMMLKIAEELP 518
>gi|148682876|gb|EDL14823.1| exosome component 10, isoform CRA_b [Mus musculus]
Length = 864
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQL L WRD AR +D
Sbjct: 468 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARRED 527
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 528 ESYGYVLPNHMMLKIAEELP 547
>gi|20071218|gb|AAH27326.1| Exosome component 10 [Mus musculus]
Length = 887
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|392340772|ref|XP_003754165.1| PREDICTED: exosome component 10-like isoform 2 [Rattus norvegicus]
gi|392348530|ref|XP_003750137.1| PREDICTED: exosome component 10-like isoform 2 [Rattus norvegicus]
Length = 860
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|227116266|ref|NP_057908.2| exosome component 10 [Mus musculus]
gi|341940669|sp|P56960.2|EXOSX_MOUSE RecName: Full=Exosome component 10; AltName: Full=Autoantigen
PM/Scl 2 homolog; AltName: Full=Polymyositis/scleroderma
autoantigen 2 homolog
Length = 887
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|355686789|gb|AER98187.1| exosome component 10 [Mustela putorius furo]
Length = 732
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 342 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 401
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 402 ESYGYVLPNHMMLKIAEELP 421
>gi|410966022|ref|XP_003989537.1| PREDICTED: exosome component 10 isoform 2 [Felis catus]
Length = 862
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|410966020|ref|XP_003989536.1| PREDICTED: exosome component 10 isoform 1 [Felis catus]
Length = 887
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|431906334|gb|ELK10531.1| Exosome component 10 [Pteropus alecto]
Length = 883
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 460 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 519
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 520 ESYGYVLPNHMMLKIAEELP 539
>gi|241600516|ref|XP_002405158.1| exosome component, putative [Ixodes scapularis]
gi|215502468|gb|EEC11962.1| exosome component, putative [Ixodes scapularis]
Length = 518
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS VC + YEK L +E+SYL +Y N++QL + L WRD I+R +D
Sbjct: 190 LHSVFQRSKQVCLKRYEKPLYTEDSYLELYRKSKKAFNSKQLYALRHLYSWRDRISRLED 249
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGYVLPN +++I++ LP
Sbjct: 250 ESTGYVLPNHMILQISEILP 269
>gi|291414300|ref|XP_002723398.1| PREDICTED: exosome component 10 [Oryctolagus cuniculus]
Length = 886
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 17 TPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARA 76
T L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR
Sbjct: 461 TQLQVVWQRSRDLCLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARR 520
Query: 77 DDESTGYVLPNRTLIEIAKQLP 98
+DES GYVLPN +++IA++LP
Sbjct: 521 EDESYGYVLPNHMMLKIAEELP 542
>gi|417405124|gb|JAA49287.1| Putative exosome 3'-5' exoribonuclease complex subunit pm/scl-100
rrp6 [Desmodus rotundus]
Length = 888
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFKLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|20381286|gb|AAH27840.1| Exosc10 protein [Mus musculus]
Length = 862
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|344283519|ref|XP_003413519.1| PREDICTED: exosome component 10 isoform 2 [Loxodonta africana]
Length = 862
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFSWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|348571393|ref|XP_003471480.1| PREDICTED: exosome component 10-like isoform 1 [Cavia porcellus]
Length = 885
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|344283517|ref|XP_003413518.1| PREDICTED: exosome component 10 isoform 1 [Loxodonta africana]
Length = 887
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFSWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|148682875|gb|EDL14822.1| exosome component 10, isoform CRA_a [Mus musculus]
Length = 916
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQL L WRD AR +D
Sbjct: 469 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARRED 528
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 529 ESYGYVLPNHMMLKIAEELP 548
>gi|348571395|ref|XP_003471481.1| PREDICTED: exosome component 10-like isoform 2 [Cavia porcellus]
Length = 860
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|432098121|gb|ELK28008.1| Exosome component 10 [Myotis davidii]
Length = 876
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 455 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 514
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 515 ESYGYVLPNHMMLKIAEELP 534
>gi|6018181|gb|AAF01781.1| P100 polymyositis-scleroderma overlap syndrome associated
autoantigen homolog [Mus musculus]
Length = 831
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|335290492|ref|XP_003127631.2| PREDICTED: exosome component 10 isoform 1 [Sus scrofa]
Length = 886
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLDLYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|119592083|gb|EAW71677.1| exosome component 10, isoform CRA_a [Homo sapiens]
Length = 899
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 490 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 549
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 550 ESYGYVLPNHMMLKIAEELP 569
>gi|355744909|gb|EHH49534.1| hypothetical protein EGM_00210 [Macaca fascicularis]
Length = 887
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 490 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 549
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 550 ESYGYVLPNHMMLKIAEELP 569
>gi|332807618|ref|XP_001136533.2| PREDICTED: exosome component 10 isoform 4 [Pan troglodytes]
Length = 909
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 490 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 549
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 550 ESYGYVLPNHMMLKIAEELP 569
>gi|108997029|ref|XP_001103741.1| PREDICTED: exosome component 10-like isoform 4 [Macaca mulatta]
gi|355557539|gb|EHH14319.1| hypothetical protein EGK_00224 [Macaca mulatta]
Length = 884
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|332250403|ref|XP_003274341.1| PREDICTED: exosome component 10 [Nomascus leucogenys]
Length = 912
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 490 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 549
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 550 ESYGYVLPNHMMLKIAEELP 569
>gi|402852919|ref|XP_003891154.1| PREDICTED: exosome component 10 [Papio anubis]
Length = 844
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 426 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 485
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 486 ESYGYVLPNHMMLKIAEELP 505
>gi|397503016|ref|XP_003822132.1| PREDICTED: exosome component 10 [Pan paniscus]
Length = 909
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 490 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 549
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 550 ESYGYVLPNHMMLKIAEELP 569
>gi|410215482|gb|JAA04960.1| exosome component 10 [Pan troglodytes]
gi|410256428|gb|JAA16181.1| exosome component 10 [Pan troglodytes]
gi|410289248|gb|JAA23224.1| exosome component 10 [Pan troglodytes]
Length = 885
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|410350403|gb|JAA41805.1| exosome component 10 [Pan troglodytes]
Length = 885
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|410256430|gb|JAA16182.1| exosome component 10 [Pan troglodytes]
Length = 890
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|410215484|gb|JAA04961.1| exosome component 10 [Pan troglodytes]
Length = 890
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|343962561|dbj|BAK62868.1| exosome component 10 [Pan troglodytes]
Length = 885
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|297282176|ref|XP_001103657.2| PREDICTED: exosome component 10-like isoform 3 [Macaca mulatta]
Length = 884
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 490 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 549
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 550 ESYGYVLPNHMMLKIAEELP 569
>gi|50301240|ref|NP_001001998.1| exosome component 10 isoform 1 [Homo sapiens]
gi|8928564|sp|Q01780.2|EXOSX_HUMAN RecName: Full=Exosome component 10; AltName: Full=Autoantigen
PM/Scl 2; AltName: Full=P100 polymyositis-scleroderma
overlap syndrome-associated autoantigen; AltName:
Full=Polymyositis/scleroderma autoantigen 100 kDa;
Short=PM/Scl-100; AltName: Full=Polymyositis/scleroderma
autoantigen 2
gi|35555|emb|CAA46904.1| PM/Scl 100kD nucleolar protein [Homo sapiens]
gi|25140242|gb|AAH39901.1| Exosome component 10 [Homo sapiens]
gi|49257470|gb|AAH73788.1| Exosome component 10 [Homo sapiens]
gi|119592085|gb|EAW71679.1| exosome component 10, isoform CRA_c [Homo sapiens]
gi|190690525|gb|ACE87037.1| exosome component 10 protein [synthetic construct]
gi|190691893|gb|ACE87721.1| exosome component 10 protein [synthetic construct]
gi|261858988|dbj|BAI46016.1| exosome component 10 [synthetic construct]
Length = 885
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|380813852|gb|AFE78800.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|383419271|gb|AFH32849.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|384947746|gb|AFI37478.1| exosome component 10 isoform 1 [Macaca mulatta]
Length = 884
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|380813854|gb|AFE78801.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|383419273|gb|AFH32850.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|384947748|gb|AFI37479.1| exosome component 10 isoform 1 [Macaca mulatta]
Length = 882
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|119592084|gb|EAW71678.1| exosome component 10, isoform CRA_b [Homo sapiens]
Length = 884
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 490 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 549
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 550 ESYGYVLPNHMMLKIAEELP 569
>gi|4505917|ref|NP_002676.1| exosome component 10 isoform 2 [Homo sapiens]
gi|179283|gb|AAB59352.1| PM-Scl autoantigen [Homo sapiens]
gi|11136976|emb|CAC15569.1| PM-scl autoantigen [Homo sapiens]
Length = 860
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|335290494|ref|XP_003356194.1| PREDICTED: exosome component 10 isoform 2 [Sus scrofa]
Length = 861
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLDLYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|395841111|ref|XP_003793392.1| PREDICTED: exosome component 10 [Otolemur garnettii]
Length = 881
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%)
Query: 22 VYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDEST 81
V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +DES
Sbjct: 464 VWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARREDESY 523
Query: 82 GYVLPNRTLIEIAKQLP 98
GYVLPN +++IA++LP
Sbjct: 524 GYVLPNHMMLKIAEELP 540
>gi|403289992|ref|XP_003936119.1| PREDICTED: exosome component 10 [Saimiri boliviensis boliviensis]
Length = 884
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 464 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 523
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 524 ESYGYVLPNHMMLKIAEELP 543
>gi|345478840|ref|XP_001599044.2| PREDICTED: exosome component 10 [Nasonia vitripennis]
Length = 1163
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY RS D+C+Q Y K + +ENSY +Y N +QL + L +WRD ARA+D
Sbjct: 814 LKAVYTRSTDICKQTYTKPVWTENSYKAMYRKSQKMFNNRQLFALQELHKWRDETARAED 873
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
+ST YVLPN L+ IA+ LP
Sbjct: 874 DSTNYVLPNHMLLNIAETLP 893
>gi|156121019|ref|NP_001095656.1| exosome component 10 [Bos taurus]
gi|154757487|gb|AAI51675.1| EXOSC10 protein [Bos taurus]
gi|296479174|tpg|DAA21289.1| TPA: exosome component 10 [Bos taurus]
Length = 702
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 17 TPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARA 76
T L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR
Sbjct: 464 TQLQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARR 523
Query: 77 DDESTGYVLPNRTLIEIAKQLP 98
+DES GYVLPN +++IA++LP
Sbjct: 524 EDESYGYVLPNHMMLKIAEELP 545
>gi|301774745|ref|XP_002922791.1| PREDICTED: exosome component 10-like isoform 1 [Ailuropoda
melanoleuca]
Length = 885
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L ++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 489 LQVAWQRSRDICLKKFAKPIFTDESYLELYRKQKRHLNTQQLTAFQLLFAWRDKTARRED 548
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 549 ESYGYVLPNHMMLKIAEELP 568
>gi|12856957|dbj|BAB30844.1| unnamed protein product [Mus musculus]
Length = 705
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN+QQL L WRD AR +D
Sbjct: 443 LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQLTAFQLLFAWRDKTARRED 502
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 503 ESYGYVLPNHMMLKIAEELP 522
>gi|301774747|ref|XP_002922792.1| PREDICTED: exosome component 10-like isoform 2 [Ailuropoda
melanoleuca]
Length = 887
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L ++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVAWQRSRDICLKKFAKPIFTDESYLELYRKQKRHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|210147550|ref|NP_957383.2| exosome component 10 [Danio rerio]
Length = 899
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 17 TPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARA 76
T + +V+ +S D+ + Y K + +E+SY+ +Y Q N QQLA + WRD +AR
Sbjct: 462 TLIQQVWTKSRDLSLKKYVKPIFTEDSYMELYRKQKKSFNTQQLAAFRLMYAWRDKLARE 521
Query: 77 DDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQN-AAN 135
+DESTGY+LPN +++IA +LP + + + + + +IK + +
Sbjct: 522 EDESTGYILPNHMMMKIADELPKEPQGIIACCNPTPPLVRQQINELHQLIKQARETPLLK 581
Query: 136 FEVIAQKLK 144
EV+AQK K
Sbjct: 582 AEVVAQKRK 590
>gi|281349256|gb|EFB24840.1| hypothetical protein PANDA_011805 [Ailuropoda melanoleuca]
Length = 834
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L ++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVAWQRSRDICLKKFAKPIFTDESYLELYRKQKRHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|384247138|gb|EIE20625.1| hypothetical protein COCSUDRAFT_18228, partial [Coccomyxa
subellipsoidea C-169]
Length = 344
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 56/92 (60%)
Query: 17 TPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARA 76
T + V +RS +C Q YEKEL SE SYL Y L +QLAV AGL WRD AR
Sbjct: 247 TCMGVVLERSRLLCLQRYEKELFSETSYLDAYRRCQEPLTREQLAVFAGLYAWRDRTARE 306
Query: 77 DDESTGYVLPNRTLIEIAKQLPTTAAKLRRLL 108
DESTG+VL L+++AK+ P+ A LR +L
Sbjct: 307 RDESTGFVLSRALLVKLAKRAPSNARDLRAVL 338
>gi|320167779|gb|EFW44678.1| exosome component 10 protein [Capsaspora owczarzaki ATCC 30864]
Length = 945
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 12 SENSDTPLTEVYKRSYDVCRQLYEKELLS-ENSYLHIYGLQGAGLNAQQLAVVAGLCEWR 70
S S L Y +S DVC + YEK L ENS++ ++ QQ+ V L WR
Sbjct: 464 SNESSNLLRVAYAKSRDVCLKTYEKPLFDPENSHMQLFLKHSRTFGPQQMQVFKALFAWR 523
Query: 71 DVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
D + R +DESTGYVLPN L IA+ LPT +A +
Sbjct: 524 DRMGREEDESTGYVLPNHMLFHIAEALPTESAGI 557
>gi|405969148|gb|EKC34144.1| Exosome component 10, partial [Crassostrea gigas]
Length = 309
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V +RS ++C ++Y+K++ E+SYL +Y N++QL + L +WRD +AR +D
Sbjct: 189 LLSVLQRSTEICAKVYKKQVFKEDSYLELYRKSKKVFNSRQLQALQKLYQWRDKLARQED 248
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGYVLPN +++IA LP
Sbjct: 249 ESTGYVLPNHMILQIADILP 268
>gi|444728183|gb|ELW68647.1| Serine/threonine-protein kinase mTOR [Tupaia chinensis]
Length = 3780
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%)
Query: 14 NSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVI 73
N L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD
Sbjct: 3150 NQPVQLQVVWQRSRDICLKKFLKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKT 3209
Query: 74 ARADDESTGYVLPNRTLIEIAKQLP 98
AR +DES GYVLPN +++IA++LP
Sbjct: 3210 ARREDESYGYVLPNHMMLKIAEELP 3234
>gi|67970274|dbj|BAE01480.1| unnamed protein product [Macaca fascicularis]
Length = 673
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|194383644|dbj|BAG59180.1| unnamed protein product [Homo sapiens]
Length = 679
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 526 ESYGYVLPNHMMLKIAEELP 545
>gi|339717675|pdb|3SAH|A Chain A, Crystal Structure Of The Human Rrp6 Catalytic Domain With
Y436a Mutation In The Catalytic Site
gi|339717676|pdb|3SAH|B Chain B, Crystal Structure Of The Human Rrp6 Catalytic Domain With
Y436a Mutation In The Catalytic Site
Length = 428
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 288 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 347
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 348 ESYGYVLPNHMMLKIAEELP 367
>gi|339717671|pdb|3SAF|A Chain A, Crystal Structure Of The Human Rrp6 Catalytic Domain With
D313n Mutation In The Active Site
gi|339717672|pdb|3SAF|B Chain B, Crystal Structure Of The Human Rrp6 Catalytic Domain With
D313n Mutation In The Active Site
gi|339717673|pdb|3SAG|A Chain A, Crystal Structure Of The Human Rrp6 Catalytic Domain With
D313n Mutation In The Active Site
gi|339717674|pdb|3SAG|B Chain B, Crystal Structure Of The Human Rrp6 Catalytic Domain With
D313n Mutation In The Active Site
Length = 428
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 288 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 347
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA++LP
Sbjct: 348 ESYGYVLPNHMMLKIAEELP 367
>gi|307107266|gb|EFN55509.1| hypothetical protein CHLNCDRAFT_133914 [Chlorella variabilis]
Length = 1092
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 22 VYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDEST 81
V +RS +C Y+KE S ++L + A L +QL+V L EWRD +AR DEST
Sbjct: 451 VLERSRRLCLLQYDKERYSPLAFLDLASKLNASLTDEQLSVFGALYEWRDSVARQLDEST 510
Query: 82 GYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAANFEVIAQ 141
GY+LP L+++A+ +P T +L + L I R + VL+ I+ + Q EV+A
Sbjct: 511 GYLLPRAQLLKLAQAMPRTVLELHKALGRSSPVISRQVAEVLAAIQAARQP----EVVA- 565
Query: 142 KLKEERME 149
+ E+R +
Sbjct: 566 AVGEQRQQ 573
>gi|383849711|ref|XP_003700481.1| PREDICTED: exosome component 10-like [Megachile rotundata]
Length = 1271
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY RS D+C++ Y K + +E S + IY N +QL + L +WRDV AR +D
Sbjct: 440 LKSVYDRSTDICKKTYVKPIWTEESCMSIYRKSQKMFNNKQLYALIELHKWRDVTAREED 499
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
+ST YVLPN L+ IA+ LP
Sbjct: 500 DSTAYVLPNHMLLNIAETLP 519
>gi|290982318|ref|XP_002673877.1| 3'-5' exonuclease and HRDC domain-containing protein [Naegleria
gruberi]
gi|284087464|gb|EFC41133.1| 3'-5' exonuclease and HRDC domain-containing protein [Naegleria
gruberi]
Length = 956
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
+ EV RS ++C + YEKEL SE SYL + + V+ L +WRD +AR DD
Sbjct: 525 MEEVLVRSKELCMRRYEKELFSETSYLSLIKFSRGCTASISENVIRVLFKWRDTVARKDD 584
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQ 131
ES YVLP+ ++ IA++ PT ++L + R ++ +I ++Q
Sbjct: 585 ESIRYVLPDHMILSIAQEAPTEVSQLLSCCNPVPKLVRRDAKIIVDLITKALQ 637
>gi|440797552|gb|ELR18636.1| 3'5' exonuclease domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 929
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%)
Query: 15 SDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIA 74
S+ + V RS ++C YEK L + S+L +Y N QQ+ V A + +WRD +A
Sbjct: 432 SNNLILAVLNRSRELCLLQYEKPLWTPTSHLSLYNRFNYVFNEQQMRVFAAVYKWRDTVA 491
Query: 75 RADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
R +DES YVLPN L IA+ +PT+ L
Sbjct: 492 REEDESYRYVLPNHMLFHIAELVPTSVPAL 521
>gi|410899603|ref|XP_003963286.1| PREDICTED: exosome component 10-like [Takifugu rubripes]
Length = 885
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V+ RS D+ + Y K + +E SYL + Q N QQLA L WRD +AR +D
Sbjct: 463 LKSVWDRSRDISLKKYMKPIFTEESYLELQRKQKKSFNTQQLAAFRLLFAWRDKLARQED 522
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGY LP +I+I+++LP
Sbjct: 523 ESTGYALPTHMMIKISEELP 542
>gi|195328901|ref|XP_002031150.1| GM25821 [Drosophila sechellia]
gi|194120093|gb|EDW42136.1| GM25821 [Drosophila sechellia]
Length = 532
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY++S DVC++ Y K + S+L + + +QL + G+ EWRD AR++D
Sbjct: 80 LGSVYQQSTDVCKKRYNKPHIGPESHLDLVRKTKRSFDNRQLYALRGIFEWRDATARSED 139
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA+ LP
Sbjct: 140 ESYGYVLPNHMMLQIAESLP 159
>gi|281206812|gb|EFA80996.1| 3'-5' exonuclease [Polysphondylium pallidum PN500]
Length = 1011
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L EV +RS ++C YEK++L ENS+ G N QL + L WR+ +AR DD
Sbjct: 452 LMEVLRRSKEICLIKYEKDILDENSHAEYLKKNGITYNPAQLKIFRLLYNWREKVARDDD 511
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLS-IIKNSMQN 132
ES Y+LPN + I ++ PTT L YI++Y +L I+++ + N
Sbjct: 512 ESVRYILPNSMMQLIVEKQPTTITDLLACCTPIPPYIKQYGHELLQDILRSRISN 566
>gi|195501501|ref|XP_002097822.1| GE26425 [Drosophila yakuba]
gi|194183923|gb|EDW97534.1| GE26425 [Drosophila yakuba]
Length = 900
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY++S DVC++ Y K + S+L + + +QL + G+ EWRD AR++D
Sbjct: 448 LGSVYQQSTDVCKKRYNKPHIGPESHLDLVRKTKRSFDNRQLYALRGIFEWRDATARSED 507
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA+ LP
Sbjct: 508 ESYGYVLPNHMMLQIAESLP 527
>gi|189182142|gb|ACD81847.1| LD13130p [Drosophila melanogaster]
Length = 930
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY++S DVC++ Y K + S+L + + +QL + G+ EWRD AR++D
Sbjct: 478 LGSVYQQSTDVCKKRYNKPHIGPESHLDLVRKTKRSFDNRQLYALRGIFEWRDATARSED 537
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA+ LP
Sbjct: 538 ESYGYVLPNHMMLQIAESLP 557
>gi|383792210|gb|AFH41845.1| FI19715p1 [Drosophila melanogaster]
Length = 930
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY++S DVC++ Y K + S+L + + +QL + G+ EWRD AR++D
Sbjct: 478 LGSVYQQSTDVCKKRYNKPHIGPESHLDLVRKTKRSFDNRQLYALRGIFEWRDATARSED 537
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA+ LP
Sbjct: 538 ESYGYVLPNHMMLQIAESLP 557
>gi|161078302|ref|NP_001097795.1| Rrp6 [Drosophila melanogaster]
gi|158030263|gb|AAF55107.3| Rrp6 [Drosophila melanogaster]
Length = 900
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY++S DVC++ Y K + S+L + + +QL + G+ EWRD AR++D
Sbjct: 448 LGSVYQQSTDVCKKRYNKPHIGPESHLDLVRKTKRSFDNRQLYALRGIFEWRDATARSED 507
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA+ LP
Sbjct: 508 ESYGYVLPNHMMLQIAESLP 527
>gi|307177174|gb|EFN66407.1| Exosome component 10 [Camponotus floridanus]
Length = 1189
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY R D+C++ Y K + +E S +++Y N +Q+ + L +WRD+ AR +D
Sbjct: 411 LKAVYDRCTDLCKRTYVKSIWTEESCMNMYRKSQKSFNNKQMYALLELHKWRDITAREED 470
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
+S GYVLPN L+ IA+ LP
Sbjct: 471 DSIGYVLPNHMLLNIAETLP 490
>gi|147772956|emb|CAN67183.1| hypothetical protein VITISV_007528 [Vitis vinifera]
Length = 1587
Score = 73.2 bits (178), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/43 (74%), Positives = 39/43 (90%)
Query: 22 VYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVA 64
VYKRS+D+C QLYEKELL+++SYL+ YGLQGA NAQQLA+VA
Sbjct: 1504 VYKRSFDICMQLYEKELLTDSSYLYTYGLQGAHFNAQQLAIVA 1546
>gi|346467363|gb|AEO33526.1| hypothetical protein [Amblyomma maculatum]
Length = 656
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%)
Query: 6 SSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAG 65
S + S +D L V+ RS V + YEK +E SYL +Y N +QL +
Sbjct: 202 SDLADRSNKNDNLLRSVFDRSKQVALKRYEKPSYNEQSYLELYRKSRKTFNTRQLHALRH 261
Query: 66 LCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
L WRD IAR +DESTGYVLP ++EI++ LP
Sbjct: 262 LYAWRDHIARVEDESTGYVLPKHMILEISEILP 294
>gi|47228827|emb|CAG07559.1| unnamed protein product [Tetraodon nigroviridis]
Length = 550
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V+ RS D+ + Y K + +E SYL + Q N QQLA L WRD +AR +D
Sbjct: 433 LKSVWDRSRDISLKKYMKPIFTEESYLELQRKQKKSFNTQQLAAFRLLFAWRDKLARQED 492
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGYVLP +I+I+++LP
Sbjct: 493 ESTGYVLPTHMMIKISEELP 512
>gi|194900862|ref|XP_001979974.1| GG21034 [Drosophila erecta]
gi|190651677|gb|EDV48932.1| GG21034 [Drosophila erecta]
Length = 900
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY++S DVC++ Y K + S+L + + +QL + G+ EWRD AR +D
Sbjct: 448 LASVYQQSTDVCKKRYNKPHIGPESHLDLVRKTKRSFDNRQLYALRGIFEWRDATARLED 507
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA+ LP
Sbjct: 508 ESYGYVLPNHMMLQIAESLP 527
>gi|196007028|ref|XP_002113380.1| hypothetical protein TRIADDRAFT_27020 [Trichoplax adhaerens]
gi|190583784|gb|EDV23854.1| hypothetical protein TRIADDRAFT_27020, partial [Trichoplax
adhaerens]
Length = 535
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%)
Query: 23 YKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTG 82
+ RS +C + YEK + ++ SYL++ N QQ A L WRD +AR +DES
Sbjct: 420 FDRSKKICLRTYEKPVFNKKSYLNLLYKHKGRFNHQQNYAFAKLYSWRDSVARDNDESAN 479
Query: 83 YVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAAN 135
+VLPN L++IA+ LP + + + +Y+G + IIK + + + N
Sbjct: 480 FVLPNHMLLQIAENLPREPQGILACCNPIPTLVRQYIGDIHQIIKKARERSIN 532
>gi|427793373|gb|JAA62138.1| Putative exosome 3'-5' exoribonuclease complex subunit pm/scl-100
rrp6, partial [Rhipicephalus pulchellus]
Length = 911
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 12 SENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRD 71
S +D L V+ RS V + YEK E SY+ +Y N++QL + L WRD
Sbjct: 444 SNENDNLLRSVFDRSKQVALRCYEKPSYHEQSYMELYRKSRKTFNSRQLHALRHLYSWRD 503
Query: 72 VIARADDESTGYVLPNRTLIEIAKQLP 98
AR +DESTGYVLPN ++EI++ LP
Sbjct: 504 RTARNEDESTGYVLPNHMILEISEILP 530
>gi|193697404|ref|XP_001951643.1| PREDICTED: exosome component 10-like [Acyrthosiphon pisum]
Length = 739
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%)
Query: 12 SENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRD 71
S N + V++RS DVC+ YE +L ++S+L +Y + QQ+ + L WRD
Sbjct: 380 STNQCNYIELVFQRSADVCKSRYEVNILRDDSHLSMYKRSKKMFDIQQMYALKHLYAWRD 439
Query: 72 VIARADDESTGYVLPNRTLIEIAKQLP 98
+AR DES GY+LPN L++I++ LP
Sbjct: 440 KLARELDESPGYILPNHMLLKISEMLP 466
>gi|221121078|ref|XP_002157951.1| PREDICTED: exosome component 10-like [Hydra magnipapillata]
Length = 758
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY +S +C +Y+K L + +SY+ Y LN QQL L EWRD AR +D
Sbjct: 419 LKSVYSKSTSICATMYQKPLFNNDSYIATYEKYRGRLNPQQLECFRLLFEWRDKTAREED 478
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES Y LPN L +IA+ LP
Sbjct: 479 ESIVYTLPNHMLFQIAENLP 498
>gi|195037619|ref|XP_001990258.1| GH19240 [Drosophila grimshawi]
gi|193894454|gb|EDV93320.1| GH19240 [Drosophila grimshawi]
Length = 911
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY++S D+C++ Y K + +S+L + + +QL + G+ WRD AR +D
Sbjct: 460 LRMVYQQSTDICKKRYTKPYIGPDSHLDLVRKTKRSFDNRQLYALRGIFTWRDATARQED 519
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA+ LP
Sbjct: 520 ESYGYVLPNHMMLQIAESLP 539
>gi|195451328|ref|XP_002072866.1| GK13832 [Drosophila willistoni]
gi|194168951|gb|EDW83852.1| GK13832 [Drosophila willistoni]
Length = 913
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY+ S +VCR+ Y K + +S+L + + +QL + GL EWRD AR +D
Sbjct: 462 LRSVYQMSTEVCRKRYTKPHIGPDSHLDLVRKTKQIFDNRQLHALRGLFEWRDTTARQED 521
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYV+PN +++IA+ LP
Sbjct: 522 ESYGYVMPNHMMLQIAESLP 541
>gi|213510932|ref|NP_001133834.1| Exosome component 10 [Salmo salar]
gi|209155512|gb|ACI33988.1| Exosome component 10 [Salmo salar]
Length = 885
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V+ +S D+ + Y K L +++SY+ + Q N QQL L WRD +AR +D
Sbjct: 465 LQMVWHKSKDISLKKYMKPLFTDDSYMDLLRKQKKVFNTQQLTAFRLLYGWRDKLARQED 524
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGYVLPN +I+I+ LP
Sbjct: 525 ESTGYVLPNHMMIKISDILP 544
>gi|432864718|ref|XP_004070425.1| PREDICTED: exosome component 10-like [Oryzias latipes]
Length = 890
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V+ +S D+ Y K + +E+SYL + Q N QQL L WRD +AR +D
Sbjct: 466 LQSVWNKSKDISLTKYMKPVFTEDSYLEVLRKQKRSFNTQQLTAFRLLFAWRDKLARQED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGY LP +I+I+++LP
Sbjct: 526 ESTGYTLPIHMMIKISEELP 545
>gi|195570818|ref|XP_002103401.1| GD20396 [Drosophila simulans]
gi|194199328|gb|EDX12904.1| GD20396 [Drosophila simulans]
Length = 896
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 66/108 (61%), Gaps = 4/108 (3%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY++S DVC++ Y K + S+L + + +QL + G+ EWRD AR++D
Sbjct: 448 LGSVYQQSTDVCKKRYNKPHIGPESHLDLVRKTKRSFDNRQLYALRGIFEWRDATARSED 507
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSII 126
ES GYVLPN +++IA+ +++ ++ +L ++++ I + + +L I+
Sbjct: 508 ESYGYVLPNHKMVQIAE---SSSREMHGIL-ARYNLIPQLLHTLLPIV 551
>gi|195143871|ref|XP_002012920.1| GL23665 [Drosophila persimilis]
gi|194101863|gb|EDW23906.1| GL23665 [Drosophila persimilis]
Length = 903
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY+ S +VC++ Y K + S+L + + +QL + GL +WRD AR +D
Sbjct: 455 LRTVYQLSMEVCKKRYTKPHIGPESHLDLVRKTKRSFDNRQLHALRGLFQWRDATARQED 514
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA+ LP
Sbjct: 515 ESYGYVLPNHMMLQIAESLP 534
>gi|332024515|gb|EGI64713.1| Exosome component 10 [Acromyrmex echinatior]
Length = 885
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY +S ++C++ Y K + +E S +++Y N +Q+ + L WRD+ AR +D
Sbjct: 442 LKAVYDQSTEICKRTYVKPIWTEESCMNMYRKSQKSFNNKQIYALLELHRWRDLTARQED 501
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
+S GY+LPN L+ IA+ LP
Sbjct: 502 DSIGYILPNHMLLNIAETLP 521
>gi|348514838|ref|XP_003444947.1| PREDICTED: exosome component 10 [Oreochromis niloticus]
Length = 892
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V+ +S + + Y K + +E SYL + Q N QQL L WRD +AR +D
Sbjct: 466 LQSVWNKSRSISLKKYVKPIYTEESYLELQRKQKKSFNTQQLTAFRLLFAWRDKLARQED 525
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGYVLP +I+I+++LP
Sbjct: 526 ESTGYVLPTHMMIKISEELP 545
>gi|341889055|gb|EGT44990.1| hypothetical protein CAEBREN_17638 [Caenorhabditis brenneri]
Length = 864
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 12/136 (8%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L +Y DVC ++Y+K + + Y+ L+ A LN++Q V+ L WRD +ARA+D
Sbjct: 446 LASMYSECTDVCVRVYKKPVFNPKGYMTEIKLRFA-LNSRQDYVLTNLYRWRDTVARAED 504
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAANFEV 138
ES +VLPN L+ I++ LP + ++++ +G +L I+ V
Sbjct: 505 ESPQFVLPNTMLLNISESLPRDIGSIYGCCNPLPLFVKKRVGDILKIV-----------V 553
Query: 139 IAQKLKEERMEVASEE 154
A+ +K E++E ++E
Sbjct: 554 QARDVKLEKIERTTKE 569
>gi|194743298|ref|XP_001954137.1| GF18126 [Drosophila ananassae]
gi|190627174|gb|EDV42698.1| GF18126 [Drosophila ananassae]
Length = 909
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY S +VC++ Y K + S+L + + +QL + G+ EWRD AR +D
Sbjct: 460 LNNVYMMSTEVCKKRYNKPHVGPESHLDLVRKTKRNFDNRQLYALRGIFEWRDATARLED 519
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA+ LP
Sbjct: 520 ESYGYVLPNHMMLQIAESLP 539
>gi|308473314|ref|XP_003098882.1| hypothetical protein CRE_31359 [Caenorhabditis remanei]
gi|308268021|gb|EFP11974.1| hypothetical protein CRE_31359 [Caenorhabditis remanei]
Length = 860
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY D+C ++Y+K + YL L+ N++Q + L +WRDV+AR +D
Sbjct: 443 LNVVYSECNDLCVRVYKKPVFKPKGYLTDLKLRFT-FNSRQDHALTSLYKWRDVVARQED 501
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAANFEV 138
ES +VLPN L+ +A+QLP + ++++ G +L II V
Sbjct: 502 ESPQFVLPNHMLLALAEQLPRDVGGIYACCNPLPHFVKKLAGQILKII-----------V 550
Query: 139 IAQKLKEERMEVASEE 154
A+++K E+++V ++E
Sbjct: 551 EAREVKLEKVKVTAKE 566
>gi|308509326|ref|XP_003116846.1| CRE-CRN-3 protein [Caenorhabditis remanei]
gi|308241760|gb|EFO85712.1| CRE-CRN-3 protein [Caenorhabditis remanei]
Length = 488
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY D+C ++Y+K + YL L+ N++Q + L +WRDV+AR +D
Sbjct: 71 LNVVYSECNDLCVRVYKKPVFKPKGYLTDLKLRFT-FNSRQDHALTSLYKWRDVVARQED 129
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAANFEV 138
ES +VLPN L+ +A+QLP + ++++ G +L II V
Sbjct: 130 ESPQFVLPNHMLLALAEQLPRDVGGIYACCNPLPHFVKKLAGQILKII-----------V 178
Query: 139 IAQKLKEERMEVASEE 154
A+++K E+++V ++E
Sbjct: 179 EAREVKLEKVKVTAKE 194
>gi|195108841|ref|XP_001999001.1| GI24274 [Drosophila mojavensis]
gi|193915595|gb|EDW14462.1| GI24274 [Drosophila mojavensis]
Length = 901
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%)
Query: 11 ESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWR 70
+SE L VY+ S DVC++ Y K + +S+L + + +QL + G+ WR
Sbjct: 446 QSEQGLQGLRMVYQMSTDVCKKRYTKPHIGPDSHLDLVRKTKRSFDNRQLHALRGIFVWR 505
Query: 71 DVIARADDESTGYVLPNRTLIEIAKQLP 98
D AR +DES GYVLPN +++IA+ LP
Sbjct: 506 DSTARQEDESYGYVLPNHMMLQIAESLP 533
>gi|195390616|ref|XP_002053964.1| GJ23053 [Drosophila virilis]
gi|194152050|gb|EDW67484.1| GJ23053 [Drosophila virilis]
Length = 904
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%)
Query: 11 ESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWR 70
++E L VY+ S +VC++ Y K + +S+L + + +QL+ + G+ WR
Sbjct: 443 QAEQGPQALRMVYQMSTEVCKKRYTKPHIGPDSHLDLVRKTKRSFDNRQLSALRGIFVWR 502
Query: 71 DVIARADDESTGYVLPNRTLIEIAKQLP 98
D AR +DES GYVLPN +++IA+ LP
Sbjct: 503 DATARQEDESYGYVLPNHMMLQIAESLP 530
>gi|357607504|gb|EHJ65543.1| PM-Scl autoantigen-like protein [Danaus plexippus]
Length = 787
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++ S +C Y KE+++E+S+L +Y N +Q+A + L WRD AR D
Sbjct: 401 LRSVFENSRHICSLTYNKEVINESSHLKLYVRSKKSFNTRQMAALRLLYRWRDANARELD 460
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
EST Y+LPN L+ +A+ LP
Sbjct: 461 ESTTYLLPNHMLLALAETLP 480
>gi|325183710|emb|CCA18169.1| exosome complex exonuclease RRP6like protein putativ [Albugo
laibachii Nc14]
Length = 770
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 22/162 (13%)
Query: 2 KIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSEN--SYLHIYGLQGAGLNA-- 57
K+K + K N+ + EV+K S +C Q+Y K +SE+ + L AG+ A
Sbjct: 384 KMKEELLLKSDSNAANLVREVHKHSNQLCLQVYSKPQVSEDDCTALVTKLTASAGVTAFS 443
Query: 58 -QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIE 116
Q V L WRD +AR DES+ YVLPN+ L++IA+ LP+ + +L RL
Sbjct: 444 ELQQRVFRRLYFWRDAVARETDESSMYVLPNQLLLQIARHLPSKSEQLLRL--------- 494
Query: 117 RYMGPVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVL 158
R + P L +Q A FE++ L E+ ME SEET+ +
Sbjct: 495 RNVIPPL------VQKHA-FEIVQLILTEKEME-QSEETKAV 528
>gi|321468927|gb|EFX79910.1| hypothetical protein DAPPUDRAFT_304334 [Daphnia pulex]
Length = 834
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%)
Query: 16 DTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIAR 75
D LT V++ S VC + Y ++ S+L +Y L N +QL + L WRD IAR
Sbjct: 407 DNLLTAVWQNSRLVCLKRYRIPPITAESHLELYRLSKKIFNERQLFALKELFAWRDRIAR 466
Query: 76 ADDESTGYVLPNRTLIEIAKQLP 98
+DESTG+VLP L++IA LP
Sbjct: 467 EEDESTGFVLPKHMLLQIADVLP 489
>gi|340723182|ref|XP_003399974.1| PREDICTED: exosome component 10-like [Bombus terrestris]
Length = 1295
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY RS ++C+ Y K + +E S + +Y N +QL + L +WRD AR +D
Sbjct: 433 LKAVYDRSTEICKNTYIKPVWTEESCMIMYRKSQKMFNNKQLYALKELHKWRDQTARGED 492
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
+S GYVLPN L+ IA+ LP
Sbjct: 493 DSIGYVLPNHMLLNIAETLP 512
>gi|391347098|ref|XP_003747802.1| PREDICTED: exosome component 10-like [Metaseiulus occidentalis]
Length = 867
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 22 VYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDEST 81
V++RS +C + YEK +L+E S+ ++ N +QL + + WRD +AR DEST
Sbjct: 432 VWQRSSLLCLKRYEKPILTEESHRNLLKTANKRFNDKQLYALKHIFAWRDRLARELDEST 491
Query: 82 GYVLPNRTLIEIAKQLP 98
GYVLPN L+ I + LP
Sbjct: 492 GYVLPNHMLLNICELLP 508
>gi|307212494|gb|EFN88225.1| Exosome component 10 [Harpegnathos saltator]
Length = 804
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY S D+C++ Y K + +E S ++ Y N +QL L +WRD+ AR +D
Sbjct: 352 LKAVYDMSTDICKRTYVKPIWTEESCMNTYRKSQKMFNNKQLYAFKELHKWRDLTAREED 411
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
+S YVLPN L+ IA+ LP
Sbjct: 412 DSINYVLPNHMLLNIAETLP 431
>gi|125773943|ref|XP_001358230.1| GA20243 [Drosophila pseudoobscura pseudoobscura]
gi|54637966|gb|EAL27368.1| GA20243 [Drosophila pseudoobscura pseudoobscura]
Length = 905
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY+ S +VC++ Y K + S+L + + +QL + G+ +WRD AR +D
Sbjct: 455 LRTVYQLSTEVCKKRYTKPHVGPESHLDLVRKTKRSFDNRQLHALRGIFQWRDATARQED 514
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLPN +++IA+ LP
Sbjct: 515 ESYGYVLPNHMMLQIAESLP 534
>gi|443695610|gb|ELT96477.1| hypothetical protein CAPTEDRAFT_99256, partial [Capitella teleta]
Length = 627
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V S VC+ Y K +LS +S+L I N+QQ+ + + WRD R DD
Sbjct: 410 LCSVLDSSTGVCKARYVKPILSSDSHLVIMKKARKWFNSQQMQALKEMYAWRDGCGRVDD 469
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGYVLPN ++ IA+ LP
Sbjct: 470 ESTGYVLPNHMMLNIAENLP 489
>gi|312385767|gb|EFR30186.1| hypothetical protein AND_00361 [Anopheles darlingi]
Length = 526
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%)
Query: 16 DTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIAR 75
D+ L VY +S +C+Q Y+K +++E+S ++IY + +Q+ + + WRD IAR
Sbjct: 382 DSLLQTVYDKSTFLCKQRYQKPIVNEDSIMNIYRRSRYVFDHRQMYALREILYWRDKIAR 441
Query: 76 ADDESTGYVLPNRTLIEIAKQLP 98
+DES GYVLP ++IA +LP
Sbjct: 442 QEDESPGYVLPQHMALDIASKLP 464
>gi|347967581|ref|XP_003436085.1| AGAP002300-PB [Anopheles gambiae str. PEST]
gi|333468394|gb|EGK96928.1| AGAP002300-PB [Anopheles gambiae str. PEST]
Length = 988
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 13 ENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDV 72
E ++ L VY +S +C+Q Y+K ++E++ ++IY + +Q+ + WRD
Sbjct: 435 EKGESLLQTVYDKSTFMCKQRYQKPTMNEDTVMNIYRRSRYVFDHRQMYAFREVLYWRDQ 494
Query: 73 IARADDESTGYVLPNRTLIEIAKQLP 98
IAR +DES GYVLP ++IA +LP
Sbjct: 495 IARLEDESPGYVLPQHMALDIASKLP 520
>gi|452823689|gb|EME30697.1| exosome complex exonuclease RRP6 [Galdieria sulphuraria]
Length = 736
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
LT Y+ S V +YEK ++ Y I + + +Q + LC WRD IAR +D
Sbjct: 402 LTCAYRASIQVSMLIYEKPQMNPLEYQSILSRRKLHFDEKQTLALRTLCRWRDEIARIED 461
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLR 105
ES YVLP + +IEIAK++P + ++LR
Sbjct: 462 ESLVYVLPEKCMIEIAKRIPQSESELR 488
>gi|347967577|ref|XP_312669.5| AGAP002300-PA [Anopheles gambiae str. PEST]
gi|333468393|gb|EAA07463.5| AGAP002300-PA [Anopheles gambiae str. PEST]
Length = 992
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 13 ENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDV 72
E ++ L VY +S +C+Q Y+K ++E++ ++IY + +Q+ + WRD
Sbjct: 439 EKGESLLQTVYDKSTFMCKQRYQKPTMNEDTVMNIYRRSRYVFDHRQMYAFREVLYWRDQ 498
Query: 73 IARADDESTGYVLPNRTLIEIAKQLP 98
IAR +DES GYVLP ++IA +LP
Sbjct: 499 IARLEDESPGYVLPQHMALDIASKLP 524
>gi|403344491|gb|EJY71591.1| hypothetical protein OXYTRI_07421 [Oxytricha trifallax]
Length = 967
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 13 ENSDTPLT---EVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEW 69
+N+ PL+ +V +S +C++ YEK ++ + +Y I G + +Q++V+ L +
Sbjct: 459 QNASNPLSMYRQVLIKSNQLCQKQYEKPIVKDYNYYMIVGRNKTIQSMKQISVLKMLVKL 518
Query: 70 RDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKS 110
RD IAR +DES+ Y +PN + ++ K LPTT +++ +S
Sbjct: 519 RDYIARLEDESSQYAIPNHIMFQMGKDLPTTRNQIKDCCRS 559
>gi|170035413|ref|XP_001845564.1| exosome component 10 [Culex quinquefasciatus]
gi|167877380|gb|EDS40763.1| exosome component 10 [Culex quinquefasciatus]
Length = 796
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY +S +C+ YEK +++E+S ++IY + +Q+ + WRD AR +D
Sbjct: 436 LQTVYNKSTFLCKHRYEKPVINEDSIMNIYHRSKHVFDQRQMYAFREILYWRDKTARLED 495
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ES GYVLP ++IA +LP
Sbjct: 496 ESAGYVLPQHMALDIASKLP 515
>gi|350418690|ref|XP_003491936.1| PREDICTED: hypothetical protein LOC100746784 [Bombus impatiens]
Length = 1271
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY RS ++C++ Y K + +E S + +Y N +QL + L +WRD AR +D
Sbjct: 433 LKAVYDRSTEICKKTYIKPVWTEESCMIMYRKSQKMFNNKQLYALKELHKWRDQTARGED 492
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
+S YVLPN L+ IA+ LP
Sbjct: 493 DSIAYVLPNHMLLNIAETLP 512
>gi|17531757|ref|NP_496283.1| Protein CRN-3, isoform a [Caenorhabditis elegans]
gi|3874231|emb|CAA90108.1| Protein CRN-3, isoform a [Caenorhabditis elegans]
gi|31747255|gb|AAP57299.1| cell death-related nuclease 3 [Caenorhabditis elegans]
Length = 876
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY S D+C ++Y+K + + YL + LN +Q + L +WRDV+ARA+D
Sbjct: 453 LANVYSESSDLCIKVYKKPVFNPKGYLTEIKFRFT-LNTRQDYALTHLFKWRDVVARAED 511
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSII 126
ES +VLPN ++ +++ LP + ++++ G +L II
Sbjct: 512 ESPHFVLPNHMMLSLSETLPRDVGGIYACCNPLPYFVKQRTGDILKII 559
>gi|157124837|ref|XP_001660547.1| hypothetical protein AaeL_AAEL010007 [Aedes aegypti]
gi|108873835|gb|EAT38060.1| AAEL010007-PA [Aedes aegypti]
Length = 949
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY +S +C+Q Y K +++E++ ++IY + +Q+ + WRD +AR +D
Sbjct: 446 LPTVYNKSTYMCKQRYVKPVINEDAVMNIYRRSKHVFDQRQMYAFREILYWRDKLARQED 505
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAANFEV 138
ES GYVLP ++IA +LP + S + +++ + II + + + N V
Sbjct: 506 ESPGYVLPQHMALDIASKLPREMQGIIACCTPVPSLVRQHLHTIHQIILKAREISLNKSV 565
Query: 139 IA 140
A
Sbjct: 566 AA 567
>gi|322799595|gb|EFZ20873.1| hypothetical protein SINV_12011 [Solenopsis invicta]
Length = 813
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY +S ++C++ Y K + +E S + +Y N +Q+ + L WRD+IAR +D
Sbjct: 440 LKAVYDQSTEICKRTYVKPIWTEESCIDLYRKSRKSFNNKQMYALVELHRWRDLIAREED 499
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
+S YVLP ++ IA+ LP
Sbjct: 500 DSIDYVLPKHMMLNIAETLP 519
>gi|302817816|ref|XP_002990583.1| hypothetical protein SELMODRAFT_448085 [Selaginella moellendorffii]
gi|300141751|gb|EFJ08460.1| hypothetical protein SELMODRAFT_448085 [Selaginella moellendorffii]
Length = 1449
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 22/149 (14%)
Query: 11 ESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYG-LQGAGLN----AQQLAVVAG 65
E++ ++ PL +RS+ +C QLYEK+ S ++ ++ Q + L+ A +
Sbjct: 931 ETDLANAPLQMATRRSHLICLQLYEKDASSASAAASLFSKFQESNLDKPREASMRRRLRL 990
Query: 66 LCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRR-----------------LL 108
LCEWRD +AR +DES +VL + ++ IA+ LP T ++ R LL
Sbjct: 991 LCEWRDAVARIEDESLRFVLSDAAIVAIARTLPRTGKEVYRSIHAADMATSTDSSKTSLL 1050
Query: 109 KSKHSYIERYMGPVLSIIKNSMQNAANFE 137
S ++R++ ++ IK+S NA + E
Sbjct: 1051 PSPSPLVKRHISSLILAIKDSAANATSGE 1079
>gi|159163846|pdb|2CPR|A Chain A, Solution Structure Of The Hrdc Domain Of Human Exosome
Component 10
Length = 124
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 36 KELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAK 95
K + ++ SYL +Y Q LN QQL L WRD AR +DES GYVLPN +++IA+
Sbjct: 8 KPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKIAE 67
Query: 96 QLP 98
+LP
Sbjct: 68 ELP 70
>gi|268532256|ref|XP_002631256.1| C. briggsae CBR-CRN-3 protein [Caenorhabditis briggsae]
Length = 868
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY S D+C ++Y+K + + Y+ + LN +Q + L WRD++ARA+D
Sbjct: 446 LENVYAESNDLCIRVYKKPVFNPKGYMTEIKFRFT-LNNRQDFALTSLYRWRDIVARAED 504
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSII 126
ES +VLPN L+ +A+ LP + ++++ G +L I+
Sbjct: 505 ESPQFVLPNHMLLSLAETLPRDVGGIYVCCNPLPYFVKQRTGDILKIM 552
>gi|328776419|ref|XP_003249163.1| PREDICTED: exosome component 10-like [Apis mellifera]
Length = 1271
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY RS ++C++ Y K + +E + + +Y N +QL + L +WRD AR +D
Sbjct: 437 LKVVYDRSTEICKKTYVKPIWTEENCMTMYRKSQKMFNNKQLYALRELHKWRDDTARIED 496
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
+S YVLPN L+ IA+ LP
Sbjct: 497 DSIAYVLPNHMLLNIAETLP 516
>gi|326431455|gb|EGD77025.1| hypothetical protein PTSG_07367 [Salpingoeca sp. ATCC 50818]
Length = 848
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 3 IKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAV 62
+K + + +EN++ L V+ RS D+C Q YE E + +Y Q L + LA+
Sbjct: 420 LKAELLERGNENANL-LRSVFTRSTDICLQRYEVPKYDEEQAMRLYNRQSLALTPKGLAI 478
Query: 63 VAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPV 122
L WRD +AR +DES YV+ + L +A+ PT +++ + + + + +
Sbjct: 479 FRALHAWRDAVARREDESPRYVMEDHMLFSLARNAPTQPSQVFAICQPTPTLVRMNAHTI 538
Query: 123 LSIIKNS 129
+ I N+
Sbjct: 539 IETITNA 545
>gi|198424231|ref|XP_002122101.1| PREDICTED: similar to exosome component 10 [Ciona intestinalis]
Length = 669
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG----LNAQQLAVVAGLCEWRDVIA 74
+ +V S D+C YEK ++ + S+L + +GAG Q+L + + WRD +A
Sbjct: 293 MHKVIGNSRDICLLKYEKLIIDDTSHLKLLR-KGAGKIEDWEPQELEALRLIYMWRDELA 351
Query: 75 RADDESTGYVLPNRTLIEIAKQLPTTAAKLR 105
R DES GY++PN+ L++IAK LP T +R
Sbjct: 352 RQKDESCGYIMPNKMLVQIAKTLPQTVQDVR 382
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG----LNAQQLAVVAGLCEWRDVIA 74
+ +V S D+C YEK ++ + S+ + +GAG Q+L + + WRD +A
Sbjct: 508 MRKVIGNSRDICLLKYEKLIIDDTSHRKLLR-KGAGKIEDWEPQELEALRLIYMWRDKLA 566
Query: 75 RADDESTGYVLPNRTLIEIAKQLPTTAAKLR 105
R DES GYVLPN+ L++IAK +P T LR
Sbjct: 567 RQMDESCGYVLPNKLLVQIAKTMPQTEQDLR 597
>gi|330802281|ref|XP_003289147.1| hypothetical protein DICPUDRAFT_153473 [Dictyostelium purpureum]
gi|325080770|gb|EGC34311.1| hypothetical protein DICPUDRAFT_153473 [Dictyostelium purpureum]
Length = 1045
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 15 SDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIA 74
S+ L EV +RS ++ YEKE+L +N+++ N QL V+ + WR+ +A
Sbjct: 425 SNNLLLEVLRRSRELALLKYEKEILDDNTHIQFAKKLNLQYNPVQLNVLKVIYHWREGLA 484
Query: 75 RADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
R +DES YVLPN+ + I + P T +L L
Sbjct: 485 REEDESVRYVLPNQMMFSIIENQPVTVQELIAL 517
>gi|440640360|gb|ELR10279.1| hypothetical protein GMDG_04665 [Geomyces destructans 20631-21]
Length = 782
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
LN +Q AV + WRD IAR DD+ST +V+ N TL+ +AK +PT A L +
Sbjct: 445 LNNEQFAVFRAVHAWRDKIARQDDDSTNFVMANHTLLSVAKVMPTDMASLLGTVHPISYN 504
Query: 115 IERYMGPVLSIIKNSMQNAANFEVIAQKLK 144
++ G +L +IK + NA + +A+ LK
Sbjct: 505 VKARTGELLELIKAAKTNAKDGPSMAEVLK 534
>gi|166240642|ref|XP_645586.2| 3'-5' exonuclease [Dictyostelium discoideum AX4]
gi|165988709|gb|EAL71650.2| 3'-5' exonuclease [Dictyostelium discoideum AX4]
Length = 1195
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L EV +RS ++ YEK++L +NS+++ + QL V+ L WR+ +AR +D
Sbjct: 443 LLEVLRRSRELSLLRYEKDILDDNSHINFAKKLNLQYSPTQLNVLKVLYHWREGLARDED 502
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
ES Y+LPN+ ++ I ++ PT+ +L L
Sbjct: 503 ESVRYILPNQMMLTIVERQPTSVQELLTL 531
>gi|390368374|ref|XP_003731440.1| PREDICTED: exosome component 10-like, partial [Strongylocentrotus
purpuratus]
Length = 776
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V +S +C Q Y K + + +S++ + N +Q+ L WRD +AR +D
Sbjct: 296 LRAVLDQSTRICVQRYNKPIFTNDSHVTAFQKNRKIFNKKQMHAFKKLFAWRDSLARQED 355
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGY+LP L +IA+ LP
Sbjct: 356 ESTGYILPMHMLFQIAEILP 375
>gi|324501716|gb|ADY40761.1| Exosome component 10 [Ascaris suum]
Length = 892
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 11 ESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQG-AGLNAQQLAVVAGLCEW 69
E S+ L Y S +CR +Y+K Y + L+G LN++QL + L +W
Sbjct: 441 EGNESNNLLRSTYNESALICRTVYKKPKFESEGYETL--LRGRKSLNSRQLYALKALWKW 498
Query: 70 RDVIARADDESTGYVLPNRTLIEIAKQLPTTA 101
RD ARA+DES YVLPN L++IA+ LP A
Sbjct: 499 RDDRARAEDESLEYVLPNHMLLQIAEVLPREA 530
>gi|397603830|gb|EJK58534.1| hypothetical protein THAOC_21330 [Thalassiosira oceanica]
Length = 452
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 16 DTPLTEVYKRSYDVCRQLYEKELLSENSYLHIY--GLQGAG----LNAQQLAVVAGLCEW 69
D + V RS VC Y+KE ++Y I G +G L +Q A + L +W
Sbjct: 30 DVSIEVVLDRSKQVCLVRYDKEPFQPSAYKSIINKGRRGGKVVTQLTQKQDASLKALYDW 89
Query: 70 RDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNS 129
RD AR +DES +V PN +L+ IA P T L+RLL + R +L + +
Sbjct: 90 RDATARKEDESIFFVCPNASLVRIASNHPKTVNALQRLLNPTPPLVMRRSQEILDALSSL 149
Query: 130 MQNA 133
NA
Sbjct: 150 AANA 153
>gi|390345989|ref|XP_001198503.2| PREDICTED: exosome component 10 [Strongylocentrotus purpuratus]
Length = 752
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V +S +C Q Y K + + +S++ + N +Q+ L WRD +AR +D
Sbjct: 442 LRAVLDQSTRICVQRYNKPIFTNDSHVTAFQKNRKIFNKKQMHAFKKLFAWRDSLARQED 501
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
ESTGY+LP L +IA+ LP
Sbjct: 502 ESTGYILPMHMLFQIAEILP 521
>gi|255075175|ref|XP_002501262.1| predicted protein [Micromonas sp. RCC299]
gi|226516526|gb|ACO62520.1| predicted protein [Micromonas sp. RCC299]
Length = 332
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 25 RSYDVCRQLYEKELLSENSYLHIY--GLQGAGLNAQQLAVVAGLCEWRDVIARADDESTG 82
RS DVC LYEK + +Y Y L+ +LAV A L WRD RA+DES G
Sbjct: 225 RSRDVCATLYEKPVTHPLTYHADYRKNRDAGDLDLPRLAVYAALHGWRDERCRAEDESIG 284
Query: 83 YVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSM 130
YV+P ++ +A++ PT L + + + ++ G ++ II ++
Sbjct: 285 YVMPRALMLRLAREAPTNPRALLAVTRGDSPLVAKHSGELVDIISRAL 332
>gi|313233556|emb|CBY09728.1| unnamed protein product [Oikopleura dioica]
Length = 790
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 21 EVYKRSYDVCRQLYEKELLSENSYLHIYGLQG-AGLNAQQLAVVAGLCEWRDVIARADDE 79
E+++ S + YEK + E+ Y +Y + N QQL + L WRD IAR +DE
Sbjct: 433 EIFRLSREFSLSKYEKPIFGESDYKKLYESKNRKKFNNQQLKALELLYAWRDQIARFEDE 492
Query: 80 STGYVLPNRTLIEIAKQLP 98
ST YV+PN L+++++ LP
Sbjct: 493 STDYVIPNHILLQVSEILP 511
>gi|301119505|ref|XP_002907480.1| exosome complex exonuclease RRP6-like protein [Phytophthora
infestans T30-4]
gi|262105992|gb|EEY64044.1| exosome complex exonuclease RRP6-like protein [Phytophthora
infestans T30-4]
Length = 1465
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 24/143 (16%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHI-YGLQGA----GLNAQQLAVVAGLCEWRDVI 73
L + + S +C Q+YEK +E L + L+G L+A Q V+ L WRD +
Sbjct: 425 LFQTLQNSSKLCLQVYEKPQPTEEDALAVGEKLKGTVYLRDLSALQKRVIVALYLWRDRV 484
Query: 74 ARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPV-LSIIKNSMQN 132
AR +DES YV+PN L+++ K LP + L R+ PV L I K+++Q
Sbjct: 485 ARQEDESVAYVMPNHVLMKLTKHLPVRSDDLFRVCH-----------PVPLLIRKHALQ- 532
Query: 133 AANFEVIAQKLKEERMEVASEET 155
I + + E+ ++A+EET
Sbjct: 533 ------ITKMIVAEKTKLAAEET 549
>gi|299473136|emb|CBN78712.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1278
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 11 ESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLA-----VVAG 65
E D + V S ++C + +EK E + + QG V++
Sbjct: 465 ERSGGDVAVKAVLDASREICLRRFEKPAFQEKGWSEVLKRQGGNGVLDDFGDVPRRVLSA 524
Query: 66 LCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSI 125
L WRD+IARA+DES GYV+ +I +A++ P++ L ++++ +L I
Sbjct: 525 LWSWRDMIARAEDESYGYVMSAYVMIRVARKCPSSRDDLEGCGNPLPRLVQQHAEDILEI 584
Query: 126 IKNSMQNAAN 135
++N+ +A
Sbjct: 585 VENAKDESAG 594
>gi|302415657|ref|XP_003005660.1| 3'-5' exonuclease domain-containing protein [Verticillium
albo-atrum VaMs.102]
gi|261355076|gb|EEY17504.1| 3'-5' exonuclease domain-containing protein [Verticillium
albo-atrum VaMs.102]
Length = 894
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
L+ +Q A + +WRD AR DESTGYVLPN + EIA+ +P A L L+ S
Sbjct: 492 LSGKQFAAYRAIWKWRDDTARRLDESTGYVLPNAAIAEIARHMPPDAKALHSLIHSNSII 551
Query: 115 IERYMGPVLSIIK 127
+R +G + + K
Sbjct: 552 AKRNVGEIWAAFK 564
>gi|313213333|emb|CBY37160.1| unnamed protein product [Oikopleura dioica]
Length = 689
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 21 EVYKRSYDVCRQLYEKELLSENSYLHIYGLQG-AGLNAQQLAVVAGLCEWRDVIARADDE 79
E+++ S + YEK + E+ Y +Y + N QQL + L WRD IAR +DE
Sbjct: 433 EIFRLSREFSLSKYEKPIFGESDYKKLYESKNRKKFNNQQLKALELLYAWRDQIARFEDE 492
Query: 80 STGYVLPNRTLIEIAKQLP 98
ST YV+PN L+++++ LP
Sbjct: 493 STDYVIPNHILLQVSEILP 511
>gi|213408214|ref|XP_002174878.1| exosome complex exonuclease RRP6 [Schizosaccharomyces japonicus
yFS275]
gi|212002925|gb|EEB08585.1| exosome complex exonuclease RRP6 [Schizosaccharomyces japonicus
yFS275]
Length = 782
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 22 VYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG-------------LNAQQLAVVAGLCE 68
V K S DV + YE+E +Y IYGL G + + LAV L
Sbjct: 399 VVKSSDDVALRRYERE-----AYDEIYGLGTDGWRHVLTKWGSSKIIGREALAVFKSLHR 453
Query: 69 WRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKN 128
WRD +AR +DES YV+PN L+++A +P+ + L + + Y ++ +I+N
Sbjct: 454 WRDQVARNEDESVRYVMPNHLLVKLAASMPSDPSDLYTSARQLPPLVRMYANEIIEVIQN 513
Query: 129 SMQN 132
+ ++
Sbjct: 514 ARED 517
>gi|336467546|gb|EGO55710.1| hypothetical protein NEUTE1DRAFT_86290 [Neurospora tetrasperma FGSC
2508]
gi|350287803|gb|EGZ69039.1| hypothetical protein NEUTE2DRAFT_115146 [Neurospora tetrasperma
FGSC 2509]
Length = 825
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSEN--------SYLHIYGLQGAGLNAQQLAVVAGLCEWR 70
L +V +RS DV Q YE LS N + ++ N +Q AV + +WR
Sbjct: 410 LEQVLERSKDVALQRYEN--LSYNVETGQGPRGWYNVLLKSPTLYNGEQFAVYKAVHQWR 467
Query: 71 DVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSM 130
D +AR +DES + + + L +IA+ LPT L +L S ++ ++ + +I+ +
Sbjct: 468 DNLARREDESPFFFMTQQVLADIARILPTDKKALWSILDSNAKGLKSHLDDLFDVIQKAK 527
Query: 131 QNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVDGVDALVGTTM 187
+ N + K E +A + ++ D S IP+V D G T+
Sbjct: 528 EEGVNGPKMMDIFKSESFVLAPAKIAAVIADDSD---IPDVKELKADRSQFWGGVTL 581
>gi|168005501|ref|XP_001755449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693577|gb|EDQ79929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 824
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 14 NSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLA-----------V 62
N + L EV +RS VC+QLYEKE + ++S + + G N A +
Sbjct: 244 NDNQLLLEVVRRSNAVCQQLYEKEGVGDSSSAVVASILGRLYNNSNSAMRGEEDAYLRRL 303
Query: 63 VAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTT 100
V L EWRD +ARA+DES +V+ + L+ +AK+ P T
Sbjct: 304 VQKLVEWRDALARAEDESLRFVMSDAALLAVAKERPLT 341
>gi|225447009|ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261955 [Vitis vinifera]
Length = 936
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 11 ESENSDTP------LTEVYKRSYDVCRQLYEKEL--------LSENSYLHIYGLQGAGLN 56
+SENS P + E +RS VC QLY KE+ S H+ G G
Sbjct: 284 DSENSCCPDDKLRFVLEASRRSNTVCLQLYIKEIEISPGESAASSIISRHLNGQGGISSK 343
Query: 57 AQQLA-VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLL 108
A L +V LC WRD++AR DES YVL ++ +I +A ++PTT ++ L+
Sbjct: 344 ACDLQDLVRRLCTWRDLMARVHDESLRYVLSDQAIIALADKVPTTQKEICTLI 396
>gi|147856691|emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera]
Length = 951
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 17/115 (14%)
Query: 11 ESENSDTP------LTEVYKRSYDVCRQLYEKEL--------LSENSYLHIYGLQGAGLN 56
+SENS P + E +RS VC QLY KE+ S H+ G G
Sbjct: 255 DSENSCCPDDKLRFVLEASRRSNTVCLQLYIKEIEISPGESAASSIISRHLNGQGGISSK 314
Query: 57 AQQLA---VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLL 108
A L +V LC WRD++AR DES YVL ++ +I +A ++PTT ++ L+
Sbjct: 315 ACDLQFQDLVRRLCTWRDLMARVHDESLRYVLSDQAIIALADKVPTTQKEICTLI 369
>gi|389640871|ref|XP_003718068.1| exosome complex exonuclease Rrp [Magnaporthe oryzae 70-15]
gi|351640621|gb|EHA48484.1| exosome complex exonuclease Rrp [Magnaporthe oryzae 70-15]
Length = 828
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 10/171 (5%)
Query: 19 LTEVYKRSYDVCRQLYEKELL-------SENSYLHIYGLQGAGLNAQQLAVVAGLCEWRD 71
L +RS D Q YE + S + I+ L + +Q +V L +WRD
Sbjct: 413 LERTLQRSKDTALQRYEAYTIDGETGRGSRGWFNLIHRLPNT-FSREQFSVYRALHKWRD 471
Query: 72 VIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQ 131
+AR +DES +++ N+ L++IA+ +P TA LRRL + + + ++ +I++S Q
Sbjct: 472 DVARREDESPMFLMSNQLLVDIARAMPETANDLRRLFTNVGPPVRNAVDELVDLIQDSRQ 531
Query: 132 NAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVDGVDAL 182
A + + +K + A + + + D + K N G+ D DA+
Sbjct: 532 KGATGPSLLEVIKADSANAAF--SNMTLTDAYRSAKTTNAGQGDDDIPDAV 580
>gi|346973710|gb|EGY17162.1| hypothetical protein VDAG_00844 [Verticillium dahliae VdLs.17]
Length = 804
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
L+ +Q A + +WRD AR DESTGYVLPN + EIA+ +P A L L+
Sbjct: 441 LSGKQFAAYRAIWKWRDDTARRLDESTGYVLPNAAIAEIARHMPPDAKALHSLIHGNSII 500
Query: 115 IERYMGPVLSIIK 127
+R +G + + K
Sbjct: 501 AKRNVGEIWAAFK 513
>gi|297739148|emb|CBI28799.3| unnamed protein product [Vitis vinifera]
Length = 935
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 17/115 (14%)
Query: 11 ESENSDTP------LTEVYKRSYDVCRQLYEKEL--------LSENSYLHIYGLQGAGLN 56
+SENS P + E +RS VC QLY KE+ S H+ G G
Sbjct: 284 DSENSCCPDDKLRFVLEASRRSNTVCLQLYIKEIEISPGESAASSIISRHLNGQGGISSK 343
Query: 57 AQQLA---VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLL 108
A L +V LC WRD++AR DES YVL ++ +I +A ++PTT ++ L+
Sbjct: 344 ACDLQFQDLVRRLCTWRDLMARVHDESLRYVLSDQAIIALADKVPTTQKEICTLI 398
>gi|440475179|gb|ELQ43880.1| exosome complex exonuclease RRP6 [Magnaporthe oryzae Y34]
gi|440487108|gb|ELQ66914.1| exosome complex exonuclease RRP6 [Magnaporthe oryzae P131]
Length = 854
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 10/171 (5%)
Query: 19 LTEVYKRSYDVCRQLYEKELL-------SENSYLHIYGLQGAGLNAQQLAVVAGLCEWRD 71
L +RS D Q YE + S + I+ L + +Q +V L +WRD
Sbjct: 439 LERTLQRSKDTALQRYEAYTIDGETGRGSRGWFNLIHRLPNT-FSREQFSVYRALHKWRD 497
Query: 72 VIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQ 131
+AR +DES +++ N+ L++IA+ +P TA LRRL + + + ++ +I++S Q
Sbjct: 498 DVARREDESPMFLMSNQLLVDIARAMPETANDLRRLFTNVGPPVRNAVDELVDLIQDSRQ 557
Query: 132 NAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVDGVDAL 182
A + + +K + A + + + D + K N G+ D DA+
Sbjct: 558 KGATGPSLLEVIKADSANAAF--SNMTLTDAYRSAKTTNAGQGDDDIPDAV 606
>gi|198421501|ref|XP_002119853.1| PREDICTED: similar to exosome component 10, partial [Ciona
intestinalis]
Length = 647
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHI---YGLQGA--GLNAQQLAVVAGLCEWRDVI 73
L +V +S D+C YEK + ++ S+L + + +G QQ+ + + WRD +
Sbjct: 240 LHKVIDKSRDICCLKYEKPITNDTSHLVLLEKHKRRGGKKDFRPQQIEALRLIFAWRDGL 299
Query: 74 ARADDESTGYVLPNRTLIEIAKQLPTTA 101
AR +DES GYVLPN L++IA+ LP A
Sbjct: 300 ARQEDESCGYVLPNHMLLQIAEILPREA 327
>gi|403418903|emb|CCM05603.1| predicted protein [Fibroporia radiculosa]
Length = 751
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 16/130 (12%)
Query: 21 EVYKRSYDVCRQLYEKELLS----------------ENSYLHIYGLQGAGLNAQQLAVVA 64
EV RS D ++YEKE+ N + + G G A Q +
Sbjct: 343 EVLSRSEDTALRVYEKEIYDADSGAGPGGWDTLARKWNKGVLMAGAPEGGPYAVQRTIYR 402
Query: 65 GLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLS 124
G+ WRD IAR +DEST YVLPN L +A++ P A L LL I R +L
Sbjct: 403 GVHAWRDRIAREEDESTRYVLPNHYLFVLAERPPADMAALLSLLHPVPPVIRRRSKELLD 462
Query: 125 IIKNSMQNAA 134
I+ ++ + A
Sbjct: 463 AIRAAIASVA 472
>gi|85094529|ref|XP_959900.1| hypothetical protein NCU02256 [Neurospora crassa OR74A]
gi|28921357|gb|EAA30664.1| hypothetical protein NCU02256 [Neurospora crassa OR74A]
gi|40804632|emb|CAF05892.1| related to nucleolar 100K polymyositis-scleroderma protein
[Neurospora crassa]
Length = 822
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSEN--------SYLHIYGLQGAGLNAQQLAVVAGLCEWR 70
L +V +RS DV Q YE LS N + ++ N +Q AV + +WR
Sbjct: 410 LEQVLERSKDVALQRYEN--LSYNVETGQGPRGWYNVLLKSPTLYNGEQFAVYKAVHQWR 467
Query: 71 DVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSM 130
D +AR +DES + + + L +IA+ LPT L +L S ++ ++ + +I+ +
Sbjct: 468 DNLARREDESPFFFMTQQVLADIARILPTDKKALWSILDSNAKGLKSHLDDLFDVIQKAR 527
Query: 131 QNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVDGVDALVGTTM 187
+ N + K E +A + ++ D S IP+V D G T+
Sbjct: 528 EEGVNGPKMMDIFKSESSILAPAKIAAVIADDSD---IPDVKELKADRSQFWGGVTL 581
>gi|254566215|ref|XP_002490218.1| Exonuclease component of the nuclear exosome [Komagataella pastoris
GS115]
gi|238030014|emb|CAY67937.1| Exonuclease component of the nuclear exosome [Komagataella pastoris
GS115]
gi|328350615|emb|CCA37015.1| exosome complex exonuclease RRP6 [Komagataella pastoris CBS 7435]
Length = 717
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGP 121
V L WRD IAR DDEST YVLPN+ L I PT + L + Y+++Y
Sbjct: 441 VFIALYNWRDEIAREDDESTRYVLPNQLLATITSISPTDVSSLMSCSNIRTPYLKKYATE 500
Query: 122 VLSIIKNSMQNAA 134
++ IIK++++ A
Sbjct: 501 LVEIIKSTLKEGA 513
>gi|206598216|gb|ACI16020.1| exosome subunit Rrp6P [Bodo saltans]
Length = 741
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 19 LTEVYKRSYDVCRQLYEKELLS-ENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L VY+ S +C YEK +L + +Y G GL+A QL V+ + WRD AR
Sbjct: 398 LVHVYQDSRRLCLTRYEKPMLDVDTTYREAMGKSLGGLSATQLEVLRVVFNWRDQAARDA 457
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSM 130
DES ++ +++IA +LPT+A ++ + R +G + ++K ++
Sbjct: 458 DESPPAIMHASAILQIASKLPTSAKEILACCAPVSLVVRRDIGHLCDLVKKTL 510
>gi|429849634|gb|ELA24996.1| exosome complex exonuclease [Colletotrichum gloeosporioides Nara
gc5]
Length = 908
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 48 YGL---QGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
YGL A + QQ AV + WRD +AR +DEST YVLPN + +IAK++P A L
Sbjct: 478 YGLLLKHPAPFSGQQFAVYRAVWAWRDEVARREDESTAYVLPNAIIGDIAKRMPPDAKAL 537
Query: 105 RRLL 108
L+
Sbjct: 538 HALI 541
>gi|50552133|ref|XP_503541.1| YALI0E04444p [Yarrowia lipolytica]
gi|49649410|emb|CAG79122.1| YALI0E04444p [Yarrowia lipolytica CLIB122]
Length = 738
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 22 VYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLN---------AQQLAVVAGLCEWRDV 72
V ++S Q YE YL + +G G+N ++V L WRD
Sbjct: 396 VLEKSRQTASQRYEYTGYDPRYYLKSFDYEG-GINRLISQFHITGPSVSVAKALFLWRDS 454
Query: 73 IARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNS 129
+AR +DESTGYV+PN L+ +A ++P T + + KS + + + +L +IK+S
Sbjct: 455 MARKEDESTGYVMPNYLLVSLANRMPQTPEAVFSVSKSLPLLVRKNVEEILDVIKDS 511
>gi|169234702|ref|NP_001108472.1| PM-Scl autoantigen-like protein [Bombyx mori]
gi|18700467|dbj|BAB85201.1| PM-Scl autoantigen-like protein [Bombyx mori]
gi|22474519|dbj|BAC10623.1| PM-Scl autoantigen-like protein [Bombyx mori]
Length = 451
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++ S C Y KE++ + S++ +Y + QQ+A + L +WRD AR D
Sbjct: 304 LLSVFEDSRQTCASTYNKEVIHDESHIPLYIRSKKNFDNQQMAALKMLYKWRDSQARQLD 363
Query: 79 ESTGYVLPNRTLIEIAKQLP 98
EST Y+LPN L+ +++ LP
Sbjct: 364 ESTTYLLPNHMLLSLSENLP 383
>gi|395329712|gb|EJF62098.1| hypothetical protein DICSQDRAFT_59413 [Dichomitus squalens LYAD-421
SS1]
Length = 861
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 21/133 (15%)
Query: 21 EVYKRSYDVCRQLYEKELLS----------------ENSYLHIYGL----QGAGLNAQQL 60
EV RS + ++YEKE+ N L I + GA +N Q+
Sbjct: 440 EVLSRSEETALRVYEKEIYDAEFGLGPGGWDTMARKWNKTLLIGSMAETNTGAAVNVQR- 498
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
AV + WRD IAR +DEST YVLPN + +A++ P A L + S I R
Sbjct: 499 AVYRAVHAWRDKIAREEDESTRYVLPNHYIFSLAERTPADMAALLSVFHPVPSVIRRRAK 558
Query: 121 PVLSIIKNSMQNA 133
+L I+++++ A
Sbjct: 559 ELLDAIRDAVKGA 571
>gi|348690893|gb|EGZ30707.1| hypothetical protein PHYSODRAFT_553621 [Phytophthora sojae]
Length = 1507
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLA-----VVAGLCEWRDVI 73
L + + S +C Q+YEK +E L + +N Q+L+ V+ L WRD +
Sbjct: 428 LFQTLQNSSKLCLQVYEKPQPTEEDALALGEKLKGTVNTQELSELQKRVIVALYLWRDRV 487
Query: 74 ARADDESTGYVLPNRTLIEIAKQLPTTAAKLRR------LLKSKHS 113
AR +DES YV+ N L+++ K LP + +L R LL KH+
Sbjct: 488 ARQEDESVAYVMANHVLMKLTKHLPVRSDELFRACHPVPLLIRKHA 533
>gi|384501951|gb|EIE92442.1| hypothetical protein RO3G_16964 [Rhizopus delemar RA 99-880]
Length = 599
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 24 KRSYDVCRQLYEKELLSENSYLHIYGLQGA------GLNAQQLAVVAGLCEWRDVIARAD 77
+RS +V Q Y+K++ L +G + +NAQQLAV + WRD AR +
Sbjct: 413 QRSNEVALQKYDKDIYDAQGGLGPFGWKNMLSKWKYSMNAQQLAVFKAIHAWRDHTARDE 472
Query: 78 DESTGYVLPNRTLIEIAKQLPT 99
DES YVLPN L + +++PT
Sbjct: 473 DESVRYVLPNHMLFALVERMPT 494
>gi|167527362|ref|XP_001748013.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773431|gb|EDQ87070.1| predicted protein [Monosiga brevicollis MX1]
Length = 837
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L VY+RS ++C Q YEK S+ + L + + L WRD +AR +D
Sbjct: 444 LRAVYQRSKELCLQRYEKPFYSQATAEDALNRMSRSLVPSAVELFMALHAWRDQVARDED 503
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKL 104
ES YVLP+ L+E+A + PT ++
Sbjct: 504 ESPRYVLPDHMLLELASRAPTETGQI 529
>gi|116203503|ref|XP_001227562.1| hypothetical protein CHGG_09635 [Chaetomium globosum CBS 148.51]
gi|88175763|gb|EAQ83231.1| hypothetical protein CHGG_09635 [Chaetomium globosum CBS 148.51]
Length = 827
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELL-----SENSYLHIYGLQGAGL 55
++ +L+ + ++ + P V ++S +V Q YE + N H + + L
Sbjct: 391 LRNELAQLATQNGSDGHPTDRVIQKSKEVALQRYENSFCDPETGAGNRGWHATLTKSSTL 450
Query: 56 -NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
+++Q AV + +WRD IAR +DES +++ + L IA+ +PT L LL+S
Sbjct: 451 YDSEQFAVYKAVHKWRDDIARQEDESPFFIMTQQVLSNIARIMPTDMKALWSLLESNTGA 510
Query: 115 IERYMGPVLSIIKNSMQNAANFEVIAQKLKE 145
++ +G + II + AN + Q ++
Sbjct: 511 LKSRLGELFKIITEAKAQGANGPTMLQFFRQ 541
>gi|393910372|gb|EFO27811.2| 3'-5' exonuclease [Loa loa]
Length = 844
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG-LNAQQLAVVAGLCEWRDVIARAD 77
L VY S C +Y+K + + Y + L G LN++Q +A L +WRD ARAD
Sbjct: 441 LEYVYNESAQTCLTVYKKPVFESDGYEKL--LVGRKPLNSRQQFALAALWKWRDERARAD 498
Query: 78 DESTGYVLPNRTLIEIAKQLP 98
DES YVLP L++IA+ LP
Sbjct: 499 DESPQYVLPCHMLLQIAEVLP 519
>gi|312066427|ref|XP_003136265.1| 3'-5' exonuclease [Loa loa]
Length = 845
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG-LNAQQLAVVAGLCEWRDVIARAD 77
L VY S C +Y+K + + Y + L G LN++Q +A L +WRD ARAD
Sbjct: 441 LEYVYNESAQTCLTVYKKPVFESDGYEKL--LVGRKPLNSRQQFALAALWKWRDERARAD 498
Query: 78 DESTGYVLPNRTLIEIAKQLP 98
DES YVLP L++IA+ LP
Sbjct: 499 DESPQYVLPCHMLLQIAEVLP 519
>gi|452835556|gb|AGG14045.1| exosome subunit RRP6p-like protein [Leishmania braziliensis]
Length = 735
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 19 LTEVYKRSYDVCRQLYEK-ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L VYK S + QLYEK +++ E +Y G +GLN Q V + WRD AR
Sbjct: 412 LVHVYKESKQLSLQLYEKPQVVPEETYKIALGRSLSGLNKVQEKVARDVFNWRDSAAREV 471
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQN 132
D+S VL +++ IA +LP TA +L R + + + ++ +K+++ N
Sbjct: 472 DDSPTAVLHLSSVLAIASKLPATAKELLRCCAPPTAVVRDNVALLVDFVKDAVAN 526
>gi|449310638|gb|AGE92546.1| exosome subunit RRP6p-like protein [Leishmania braziliensis]
Length = 735
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 19 LTEVYKRSYDVCRQLYEK-ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L VYK S + QLYEK +++ E +Y G +GLN Q V + WRD AR
Sbjct: 412 LVHVYKESKQLSLQLYEKPQVVPEETYKIALGRSLSGLNKVQEKVARDVFNWRDSAAREV 471
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQN 132
D+S VL +++ IA +LP TA +L R + + + ++ +K+++ N
Sbjct: 472 DDSPTAVLHLSSVLAIASKLPATAKELLRCCAPPTAVVRDNVALLVDFVKDAVAN 526
>gi|308810304|ref|XP_003082461.1| Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6)
(ISS) [Ostreococcus tauri]
gi|116060929|emb|CAL57407.1| Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6)
(ISS) [Ostreococcus tauri]
Length = 701
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 7 SMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLH--IYGLQGAGLNAQQLAVVA 64
++ ENS + +S DVC + Y E SY + LN QLAV A
Sbjct: 286 ALAARGENS---IAATLTQSRDVCLKKYLPPTFDEGSYYEDLLKTNNLTNLNDPQLAVYA 342
Query: 65 GLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLS 124
L +WRD AR DES GYV+P ++ +A P+T L + + I ++ V
Sbjct: 343 ALFKWRDAAAREADESLGYVMPRELMLRLAIAAPSTKRALMEECRGQVPLIAKHAETVAD 402
Query: 125 IIKNS 129
+I +
Sbjct: 403 LISRA 407
>gi|194376518|dbj|BAG57405.1| unnamed protein product [Homo sapiens]
Length = 529
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V++RS D+C + + K + ++ SYL +Y Q LN QQL L WRD AR +D
Sbjct: 466 LQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARRED 525
Query: 79 ESTG 82
ES G
Sbjct: 526 ESYG 529
>gi|310792006|gb|EFQ27533.1| 3'-5' exonuclease [Glomerella graminicola M1.001]
Length = 882
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
+ QQ AV + WRD +AR +DEST +V+PN + +IAK +P A L L+ + H++
Sbjct: 445 FSGQQFAVYRAIWAWRDEVARREDESTPFVMPNAIIGDIAKHMPPDAKALHALIPN-HAF 503
Query: 115 IER 117
I R
Sbjct: 504 IAR 506
>gi|452978276|gb|EME78040.1| hypothetical protein MYCFIDRAFT_107101, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 799
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 19 LTEVYKRSYDVCRQLYEKELLS-ENS-----YLHIYGLQGAGLNAQQLAVVAGLCEWRDV 72
L +V +S + Q YE + EN + + A L +Q +V + +WRD
Sbjct: 413 LWDVLTKSSETALQRYEHPIYDVENGQGSFGWYKLLAKTSAMLTKEQFSVFRAVHQWRDE 472
Query: 73 IARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
+AR D+ST +V+PN L IAK +PTT L L
Sbjct: 473 VAREQDDSTNFVMPNWQLFNIAKSMPTTRQALFSL 507
>gi|154336623|ref|XP_001564547.1| putative exosome subunit rrp6p homologue [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061582|emb|CAM38612.1| putative exosome subunit rrp6p homologue [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 735
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 19 LTEVYKRSYDVCRQLYEK-ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L VYK S + QLYEK ++ E +Y G +GLN Q V + WRD AR
Sbjct: 412 LVHVYKESKQLSLQLYEKPHVVPEETYKIALGRSLSGLNKVQEKVARDVFNWRDSAAREV 471
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQN 132
D+S VL +++ IA +LP TA +L R + + + ++ +K+++ N
Sbjct: 472 DDSPTAVLHLSSVLAIASKLPATAKELLRCCAPPTAVVRDNVALLVDFVKDAVAN 526
>gi|336273270|ref|XP_003351390.1| hypothetical protein SMAC_03697 [Sordaria macrospora k-hell]
gi|380092911|emb|CCC09664.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 821
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 9/175 (5%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGL------NAQQLAVVAGLCEWRDV 72
L +V +RS DV Q YE + + + G L N++Q AV + +WRD
Sbjct: 410 LEQVLERSKDVALQRYENPSYNVETGMGPRGWYNVLLKSPTLYNSEQFAVYKAVHQWRDN 469
Query: 73 IARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQN 132
+AR +DES + + + L +IA+ LPT L +L S ++ ++ + +I+ + +
Sbjct: 470 LARREDESPFFFMTQQVLADIARILPTDKKALWSILDSNAKGLKSHLDHLFDVIQKAREE 529
Query: 133 AANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVDGVDALVGTTM 187
+ + K + +A + ++ D S IP+V D G T+
Sbjct: 530 GVDGPKMMDIFKSDSSIIAPSKRAAVISDDSD---IPDVKELKADRSQFWGGVTL 581
>gi|297826687|ref|XP_002881226.1| hypothetical protein ARALYDRAFT_320982 [Arabidopsis lyrata subsp.
lyrata]
gi|297327065|gb|EFH57485.1| hypothetical protein ARALYDRAFT_320982 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 12 SENSDTP------LTEVYKRSYDVCRQLYEKEL--------LSENSYLHIYGL---QGAG 54
+E+S +P L E +RS C QLY KE S Y H+ G
Sbjct: 290 TEDSSSPDDRFHFLLEASRRSNMTCLQLYTKETEDFPGSAAASSIIYRHLNGHGDKSNIS 349
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTT 100
LNA++L V LC WRD++ R DEST YVL ++ ++ +A + PTT
Sbjct: 350 LNAEEL--VRKLCAWRDLMGRIHDESTRYVLSDQAIVGLACKQPTT 393
>gi|367047893|ref|XP_003654326.1| hypothetical protein THITE_2117244 [Thielavia terrestris NRRL 8126]
gi|347001589|gb|AEO67990.1| hypothetical protein THITE_2117244 [Thielavia terrestris NRRL 8126]
Length = 882
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGL----- 55
++ +L+ + +S + P+ V ++S +V Q Y L + G +
Sbjct: 392 LRNELAELSAQSPPGEKPIDRVIQKSKEVSLQRYVHPLCDRETGAGSRGWYNTLIKSPTL 451
Query: 56 -NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
N +Q AV + +WRD +AR +DES Y++ + L +IA+ LPT L LL S
Sbjct: 452 YNGEQFAVYKAVHKWRDDVARREDESPYYIMTQQVLADIARILPTDPKALWSLLDSNARA 511
Query: 115 IERYMGPVLSIIKNSMQNAANFEVIAQKLKE 145
++ + + +I+ + AN + + K+
Sbjct: 512 LKPRLTELFGVIERARAAGANGPTMMEFFKQ 542
>gi|342880534|gb|EGU81622.1| hypothetical protein FOXB_07858 [Fusarium oxysporum Fo5176]
Length = 860
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 40 SENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPT 99
S Y +I+ +++Q AV L +WRD AR +DEST YVL R + EIA+ P
Sbjct: 456 SRGWYGYIFKNSHLAFDSEQFAVFRALWKWRDNTARKEDESTNYVLSTRDITEIARINPP 515
Query: 100 TAAKLRRLL 108
A L LL
Sbjct: 516 DAKALHSLL 524
>gi|357471299|ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
gi|355506989|gb|AES88131.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
Length = 974
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 19 LTEVYKRSYDVCRQLYEKELLS---ENSYLHIYGLQGAGL-------NAQQLAVVAGLCE 68
+ E +RS +C QL+ KE+ + E++ L +Y + Q L++V LC
Sbjct: 342 VLEASRRSNMICLQLFTKEIEASPGESAALSLYSRHQSNRASPSISNETQFLSIVRQLCT 401
Query: 69 WRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
WRD++AR DES YVL ++ ++ +A +LP + +++
Sbjct: 402 WRDLMARIHDESLKYVLSDQAIVALASRLPASNSEI 437
>gi|297727619|ref|NP_001176173.1| Os10g0437200 [Oryza sativa Japonica Group]
gi|255679435|dbj|BAH94901.1| Os10g0437200 [Oryza sativa Japonica Group]
Length = 89
Score = 55.1 bits (131), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 37/50 (74%), Gaps = 3/50 (6%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGL 50
M+++L KES + + L EVYKRS ++C QLYEKELL+ +SYL+I+G
Sbjct: 26 MRLRLV---KESSDENDLLLEVYKRSKEICLQLYEKELLTHSSYLYIHGF 72
>gi|63054485|ref|NP_593004.2| exosome 3'-5' exoribonuclease subunit Rrp6 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|6226742|sp|Q10146.2|RRP6_SCHPO RecName: Full=Exosome complex exonuclease rrp6; AltName:
Full=Ribosomal RNA-processing protein 6
gi|159883898|emb|CAA93168.2| exosome 3'-5' exoribonuclease subunit Rrp6 (predicted)
[Schizosaccharomyces pombe]
Length = 777
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 8 MPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG------------- 54
+ K +E + + V+ S + + YE E Y IYGL G
Sbjct: 386 ISKSAERKENLMQSVFNSSKQISLRKYELE-----PYDPIYGLGTDGWRNVLTKFGSSKI 440
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
+ + L + L +WRD +AR +DES YVLPNR LI IA P AA + + K
Sbjct: 441 IGREALMIYRALHDWRDSVARKEDESVRYVLPNRLLIAIAASKPVEAADVFSISKQLTPI 500
Query: 115 IERYMGPVLSIIK 127
Y+ ++ +++
Sbjct: 501 ARMYVEDIVKVVQ 513
>gi|406606562|emb|CCH42061.1| exosome complex exonuclease [Wickerhamomyces ciferrii]
Length = 744
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 50 LQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLK 109
L L+A + AVV L +WRD IA+ DDES YV+PN+ L+ +A +PT A +
Sbjct: 432 LYQYNLSASREAVVRSLYQWRDQIAKQDDESPRYVMPNQLLVSLASLVPTDPAGVLSSSN 491
Query: 110 SKHSYIERYMGPVLSIIKNSMQNA 133
++ + + +IK SM+ A
Sbjct: 492 LISDHVRKNAKEISELIKRSMKEA 515
>gi|401428763|ref|XP_003878864.1| putative exosome subunit rrp6p homologue [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495113|emb|CBZ30417.1| putative exosome subunit rrp6p homologue [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 743
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 19 LTEVYKRSYDVCRQLYEK-ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L VY S + Q+YEK ++ E +Y G +GLN Q V + WRD AR
Sbjct: 412 LVHVYNESKQLSLQIYEKPNVVPEETYKIALGRSLSGLNKVQEKVACDVFNWRDSAAREV 471
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSM 130
D+S VL +++ IA +LPTTA +L R + + + ++ ++K+++
Sbjct: 472 DDSPMAVLHLSSVLSIASKLPTTAKELLRCCAPATAVVRDNVALLVDLVKDAV 524
>gi|226487924|emb|CAX75627.1| Exosome component 10 [Schistosoma japonicum]
Length = 860
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 6 SSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG-LNAQQLAVVA 64
S M +E ++ + L+ ++R+ +C + Y K + + YL +Y G + +QL +
Sbjct: 419 SRMCRELQDRNL-LSVTFERARQLCLKCYTKPVFNRLGYLDLYKQTGCSSFSHRQLYALE 477
Query: 65 GLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
L RD IAR +DES YVLPN L IA+ LP
Sbjct: 478 NLHALRDSIARREDESLHYVLPNHMLKVIAEVLP 511
>gi|340380967|ref|XP_003388993.1| PREDICTED: exosome component 10-like [Amphimedon queenslandica]
Length = 724
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYG-LQGAGLNAQQLAVVAGLCEWRDVIARAD 77
+ V K S ++ ++Y+K +++ SYL + L+ +QL + L +WR +AR +
Sbjct: 409 INAVLKNSKEISLKVYKKPAINDESYLKLCKKFNKRNLSHKQLYALKCLYQWRFNVARRE 468
Query: 78 DESTGYVLPNRTLIEIAKQLP 98
DES GYVLPN L ++ + LP
Sbjct: 469 DESPGYVLPNHMLFQLCEILP 489
>gi|393243266|gb|EJD50781.1| hypothetical protein AURDEDRAFT_159928 [Auricularia delicata
TFB-10046 SS5]
Length = 837
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 54 GLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHS 113
GL+ LAV + EWRD +AR DEST YV+ N +L ++A PT A+L L +
Sbjct: 473 GLHGLPLAVYKAVHEWRDTVARTTDESTRYVMGNSSLFKLADAQPTDMAQLTAALHPMSA 532
Query: 114 YIERYMGPVLSIIKNSMQN 132
+ + +L++I ++++
Sbjct: 533 IVRKRGKDLLNVISRAVKD 551
>gi|154301232|ref|XP_001551029.1| hypothetical protein BC1G_10286 [Botryotinia fuckeliana B05.10]
Length = 823
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 11 ESENSDTP----LTEVYKRSYDVCRQLYEKELLSENS------YLHIYGLQGAGLNAQQL 60
E+ +++TP + V ++S + YE++L + S + + A L+++Q
Sbjct: 398 ETPDAETPAATSMDIVLQKSKETSLLRYERQLYNAESGKGPGGWFSLIYKTPALLSSEQF 457
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V + WRD IAR DD+S +V+ N ++ +AK +P L +++ ++ G
Sbjct: 458 SVFKAVHAWRDQIARKDDDSINFVMSNSVVVNLAKFMPMDMIALLSIIRPISHSVKSRTG 517
Query: 121 PVLSIIKNSMQNAAN 135
+L +IK + +N +
Sbjct: 518 ELLEVIKAAKENGKD 532
>gi|347827584|emb|CCD43281.1| hypothetical protein [Botryotinia fuckeliana]
Length = 823
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 11 ESENSDTP----LTEVYKRSYDVCRQLYEKELLSENS------YLHIYGLQGAGLNAQQL 60
E+ +++TP + V ++S + YE++L + S + + A L+++Q
Sbjct: 398 ETPDAETPAATSMDIVLQKSKETSLLRYERQLYNAESGKGPGGWFSLIYKTPALLSSEQF 457
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V + WRD IAR DD+S +V+ N ++ +AK +P L +++ ++ G
Sbjct: 458 SVFKAVHAWRDQIARKDDDSINFVMSNSVVVNLAKFMPMDMIALLSIIRPISHSVKSRTG 517
Query: 121 PVLSIIKNSMQNAAN 135
+L +IK + +N +
Sbjct: 518 ELLEVIKAAKENGKD 532
>gi|170112858|ref|XP_001887630.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637532|gb|EDR01817.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 854
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 19 LTEVYKRSYDVCRQLYEKELLS----------------ENSYLHIYGLQGAGLNAQQLAV 62
LT+V RS + ++Y KE N + G G G+ A Q V
Sbjct: 432 LTQVLTRSAETSLRVYVKEPYDAADGSGPGGWDTLAKKWNKGALMAGGPGVGIGAMQREV 491
Query: 63 VAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSK-HSYIERYMGP 121
+ WR+ +AR +DEST Y +PN+ L ++A+Q P A L + KS + + R
Sbjct: 492 YVRVHGWRERVAREEDESTRYTMPNQYLFQLAEQPPADMAALLGVFKSSVPALVRRRAKE 551
Query: 122 VLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKI 168
+L +I+ ++ + +A K++EE + S EV+ D +S K+
Sbjct: 552 LLEVIREGVKRGLEGKQVA-KVEEEPSKTGS---EVVAPDAASKEKM 594
>gi|315054289|ref|XP_003176519.1| exosome component 3'-5' exonuclease [Arthroderma gypseum CBS
118893]
gi|311338365|gb|EFQ97567.1| exosome complex exonuclease RRP6 [Arthroderma gypseum CBS 118893]
Length = 827
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
L +Q AV L EWRD +AR DDEST VL R+L IA+++P + R+ +
Sbjct: 479 LTREQFAVFRALHEWRDKVARTDDESTQTVLSKRSLFRIAQEMPEDKFAVLRMASPVSAS 538
Query: 115 IERYMGPVLSIIKNSMQNAAN 135
+ V ++I+ + Q A
Sbjct: 539 LRSRTDEVAALIRQARQGGAT 559
>gi|242011128|ref|XP_002426307.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510384|gb|EEB13569.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 737
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L V S +C + Y+K E+ Y+ IY + +Q + L WRD AR D
Sbjct: 428 LRTVINESTRICLKTYKKPNFDESGYMSIYTRSKKIFDNRQKYALQRLYAWRDSTARELD 487
Query: 79 ESTGYVLPNRTLIEIAKQLPTTA 101
ES YVLPN ++ I++ LP A
Sbjct: 488 ESLAYVLPNHMMLNISEVLPREA 510
>gi|256073603|ref|XP_002573119.1| polymyositis/scleroderma autoantigen-related [Schistosoma mansoni]
gi|353232486|emb|CCD79841.1| polymyositis/scleroderma autoantigen-related [Schistosoma mansoni]
Length = 830
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 6 SSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG-LNAQQLAVVA 64
S M +E ++ D L+ +R+ +C + Y K + + YL +Y G+ + +QL +
Sbjct: 375 SRMCRELQDRDL-LSVAIERARQLCLRCYTKPVFNRLGYLDLYRQTGSSSFSHRQLYALE 433
Query: 65 GLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
L RD IAR +DES YVLPN L IA+ LP
Sbjct: 434 NLYALRDSIARREDESLHYVLPNHMLKVIAEVLP 467
>gi|402589191|gb|EJW83123.1| 3'-5' exonuclease [Wuchereria bancrofti]
Length = 822
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 13 ENSDTPLTE-VYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG-LNAQQLAVVAGLCEWR 70
EN+ L E VY S C +Y+K + Y + L G LN++Q +A L +WR
Sbjct: 437 ENAANNLLEFVYNESAQTCLNVYKKPTFESDGYEKL--LVGRKPLNSRQQFALAALWKWR 494
Query: 71 DVIARADDESTGYVLPNRTLIEIAKQLP 98
D AR DDES YVLP +++IA+ LP
Sbjct: 495 DERARTDDESPQYVLPCHMMLQIAEVLP 522
>gi|156039491|ref|XP_001586853.1| hypothetical protein SS1G_11882 [Sclerotinia sclerotiorum 1980]
gi|154697619|gb|EDN97357.1| hypothetical protein SS1G_11882 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 808
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 18 PLTEVYKRSYDVCRQLYEKELLSENS------YLHIYGLQGAGLNAQQLAVVAGLCEWRD 71
P+ V ++S + YE+++ + S + + A L+++Q AV + WRD
Sbjct: 404 PMETVLEKSKETSLLRYERQVYNAESGKGPGGWFSLIYKTPALLSSEQFAVFKAVHAWRD 463
Query: 72 VIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQ 131
IAR DD+S +V+ N +I +AK +P L +++ ++ +L IIK + +
Sbjct: 464 QIARKDDDSINFVMSNSVVINLAKFMPMDMIALLSIIRPISYSVKSRTQELLEIIKAAKE 523
Query: 132 NAAN 135
N +
Sbjct: 524 NGKD 527
>gi|380485396|emb|CCF39387.1| 3'-5' exonuclease [Colletotrichum higginsianum]
Length = 732
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
+ QQ AV + WRD +AR +DEST +VLPN + +IAK +P A L L+ + H++
Sbjct: 296 FSGQQFAVYRAIWAWRDEVARREDESTPFVLPNGIIGDIAKHMPPDAKALHALIPN-HAF 354
Query: 115 IER 117
+ +
Sbjct: 355 LAK 357
>gi|320588480|gb|EFX00949.1| exosome complex exonuclease [Grosmannia clavigera kw1407]
Length = 1631
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 42 NSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTA 101
NS + Y + LN+ Q AV + WRD +AR DES GYV+P R++ +IA+ LP+
Sbjct: 443 NSLMRTYSM----LNSSQFAVFKAIFRWRDDLARRLDESPGYVMPIRSVGDIARILPSDR 498
Query: 102 AKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAANFEVIAQKLKEERMEVASE 153
+ LL + + M + +I+ + A+ ++ L+ E + AS+
Sbjct: 499 KAMWSLLNNAARETKSSMEEIFLLIQQAKLRGADGPSSSEFLRSEAVGAASK 550
>gi|393212538|gb|EJC98038.1| hypothetical protein FOMMEDRAFT_149467 [Fomitiporia mediterranea
MF3/22]
Length = 845
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 25 RSYDVCRQLYEKELLS-ENS-----YLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
RS D ++YE E EN + + G L+ Q V WRD +AR +D
Sbjct: 435 RSEDTALRIYEPEFYDLENGTGPGGWNTLSLKWGRALSGTQHTVFRAAHAWRDALARKED 494
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAANFEV 138
EST YV+PN L ++A++ PT A L + + PV +++ Q A+ EV
Sbjct: 495 ESTRYVMPNHYLFQLAERPPTDMANLLSIFR-----------PVPPLVRT--QAASLLEV 541
Query: 139 IAQKLKE 145
I +KE
Sbjct: 542 IRTAVKE 548
>gi|160892403|gb|ABX52081.1| RRP6-like protein 3 [Arabidopsis thaliana]
Length = 892
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 12 SENSDTP------LTEVYKRSYDVCRQLYEKEL--------LSENSYLHIYGL---QGAG 54
+E+S +P L E +RS C QLY KE S Y H+ G
Sbjct: 291 TEDSSSPDDRFHFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHGDKSNIS 350
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
LNA++L V LC WRD++ R DEST YVL ++ ++ ++ + PTT ++
Sbjct: 351 LNAEEL--VRKLCAWRDLMGRIHDESTRYVLSDQAIVGLSCKQPTTTEEI 398
>gi|146099475|ref|XP_001468653.1| exosome subunit rrp6p homologue, putative [Leishmania infantum
JPCM5]
gi|134073021|emb|CAM71740.1| exosome subunit rrp6p homologue, putative [Leishmania infantum
JPCM5]
Length = 743
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 19 LTEVYKRSYDVCRQLYEK-ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L VY S + Q+YEK ++ E +Y G +GLN Q V + WRD AR
Sbjct: 412 LVHVYNESKQLSLQIYEKPSVVPEETYKIALGRSLSGLNKVQEKVARDVFNWRDSAAREV 471
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSM 130
D+S VL +++ IA +LPTTA L R + + + ++ ++K+++
Sbjct: 472 DDSPTAVLHLSSVLSIASKLPTTAKALLRCCAPATAVVRDNVALLVDLVKDAV 524
>gi|170575788|ref|XP_001893385.1| 3'-5' exonuclease family protein [Brugia malayi]
gi|158600662|gb|EDP37784.1| 3'-5' exonuclease family protein [Brugia malayi]
Length = 847
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 13 ENSDTPLTE-VYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG-LNAQQLAVVAGLCEWR 70
EN+ L E VY S C +Y+K + Y + L G LN++Q +A L +WR
Sbjct: 437 ENAANNLLEFVYNESAQTCLTVYKKPKFESDGYEKL--LVGRKPLNSRQQFALAALWKWR 494
Query: 71 DVIARADDESTGYVLPNRTLIEIAKQLP 98
D AR DDES YVLP +++IA+ LP
Sbjct: 495 DERARTDDESPQYVLPCHMMLQIAEVLP 522
>gi|157876102|ref|XP_001686412.1| putative exosome subunit rrp6p homologue [Leishmania major strain
Friedlin]
gi|68129486|emb|CAJ08029.1| putative exosome subunit rrp6p homologue [Leishmania major strain
Friedlin]
Length = 742
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 19 LTEVYKRSYDVCRQLYEK-ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L VY S + Q+YEK ++ E +Y G +GLN Q V + WRD AR
Sbjct: 411 LVHVYNESKQLSLQIYEKPNVVPEETYKMALGRSLSGLNKVQEKVARDVFNWRDSAAREV 470
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSM 130
D+S VL +++ IA +LPTTA L R + + + ++ ++K+++
Sbjct: 471 DDSPTAVLHLSSVLSIASKLPTTAKALLRCCAPATAVVRDNVTLLVDLVKDAV 523
>gi|328767973|gb|EGF78021.1| hypothetical protein BATDEDRAFT_27210 [Batrachochytrium
dendrobatidis JAM81]
Length = 826
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 34 YEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEI 93
Y K+ LS N + + N + LAV + EWRD IAR +DES +VLPN L +
Sbjct: 447 YCKDGLSPNGWRSLLNRLKISFNEENLAVFKAIHEWRDRIARKEDESLRFVLPNHMLQTL 506
Query: 94 AKQLPT 99
++ +PT
Sbjct: 507 SRVMPT 512
>gi|255712831|ref|XP_002552698.1| KLTH0C11066p [Lachancea thermotolerans]
gi|238934077|emb|CAR22260.1| KLTH0C11066p [Lachancea thermotolerans CBS 6340]
Length = 735
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGP 121
+V L EWRD++AR DDES YV+PN+ L+ +A PTT A + +I +
Sbjct: 443 LVRRLYEWRDMVARRDDESPRYVIPNQLLVSLAVNAPTTPALIMATSTFVTEHIRQNAKS 502
Query: 122 VLSIIKNSMQNAAN 135
+ +IK S+++++N
Sbjct: 503 LALLIKKSLESSSN 516
>gi|367017047|ref|XP_003683022.1| hypothetical protein TDEL_0G04440 [Torulaspora delbrueckii]
gi|359750685|emb|CCE93811.1| hypothetical protein TDEL_0G04440 [Torulaspora delbrueckii]
Length = 735
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPT 99
+V L +WRD IAR DDES YV+PN+ L+E+A+Q PT
Sbjct: 439 LVKKLYDWRDTIARRDDESPRYVMPNQLLVELARQAPT 476
>gi|398022862|ref|XP_003864593.1| unnamed protein product [Leishmania donovani]
gi|322502828|emb|CBZ37911.1| unnamed protein product [Leishmania donovani]
Length = 743
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 19 LTEVYKRSYDVCRQLYEK-ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L VY S + Q+YEK ++ E +Y G +GLN Q V + WRD AR
Sbjct: 412 LVHVYNESKQLSLQIYEKPSVVPEETYKIALGRSLSGLNKVQEKVARDVFNWRDSAAREV 471
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSM 130
D+S VL +++ IA +LPTTA L R + + + ++ ++K+++
Sbjct: 472 DDSPTAVLHLSSVLSIASKLPTTAKALLRCCAPATAVVRDNVALLVDLVKDAV 524
>gi|449016126|dbj|BAM79528.1| similar to polymyositis-scleroderma overlap syndrome associated
autoantigen [Cyanidioschyzon merolae strain 10D]
Length = 492
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADD 78
L +++ +S DV + Y + ++ +++L + A L+ L ++ L WRD IAR D
Sbjct: 318 LQQLWLKSADVALRRYALQEVAADAHLKVARQYKAMLSDTMLPLLRDLIHWRDQIAREAD 377
Query: 79 ESTGYVLPNRTLIEIAKQLPTTAAKLRRLLK 109
ES YV PN LI + ++ P + +L +LL+
Sbjct: 378 ESPPYVFPNHFLIALVRETPRSPFQLDKLLR 408
>gi|240254568|ref|NP_850189.5| RRP6-like protein 3 [Arabidopsis thaliana]
gi|330253588|gb|AEC08682.1| RRP6-like protein 3 [Arabidopsis thaliana]
Length = 891
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Query: 19 LTEVYKRSYDVCRQLYEKEL--------LSENSYLHIYGL---QGAGLNAQQLAVVAGLC 67
L E +RS C QLY KE S Y H+ G LNA++L V LC
Sbjct: 303 LLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHGDKSNISLNAEEL--VRKLC 360
Query: 68 EWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
WRD++ R DEST YVL ++ ++ ++ + PTT ++
Sbjct: 361 AWRDLMGRIHDESTRYVLSDQAIVGLSCKQPTTTEEI 397
>gi|334184634|ref|NP_001189656.1| RRP6-like protein 3 [Arabidopsis thaliana]
gi|330253589|gb|AEC08683.1| RRP6-like protein 3 [Arabidopsis thaliana]
Length = 872
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Query: 19 LTEVYKRSYDVCRQLYEKEL--------LSENSYLHIYGL---QGAGLNAQQLAVVAGLC 67
L E +RS C QLY KE S Y H+ G LNA++L V LC
Sbjct: 303 LLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHGDKSNISLNAEEL--VRKLC 360
Query: 68 EWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
WRD++ R DEST YVL ++ ++ ++ + PTT ++
Sbjct: 361 AWRDLMGRIHDESTRYVLSDQAIVGLSCKQPTTTEEI 397
>gi|302916517|ref|XP_003052069.1| hypothetical protein NECHADRAFT_92603 [Nectria haematococca mpVI
77-13-4]
gi|256733008|gb|EEU46356.1| hypothetical protein NECHADRAFT_92603 [Nectria haematococca mpVI
77-13-4]
Length = 833
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 40 SENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPT 99
S Y +++ L+++Q AV + +WRD ARA+DE+ YVL R + EIA+ P
Sbjct: 433 SRGWYGYVFKNSHMALDSEQFAVFKAVWKWRDDTARAEDENPNYVLSTRDITEIARLNPP 492
Query: 100 TAAKLRRLL 108
A L LL
Sbjct: 493 DAKALHSLL 501
>gi|392579689|gb|EIW72816.1| hypothetical protein TREMEDRAFT_70822 [Tremella mesenterica DSM
1558]
Length = 955
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
AV L WRD +AR +DES +VLPN L+ ++KQ P+T +++++ + R+
Sbjct: 547 AVFKALHSWRDSLARNEDESPVWVLPNDKLVALSKQRPSTLFVVQKIIGNYSPLALRHAA 606
Query: 121 PVLSIIKNS 129
+LS+I ++
Sbjct: 607 DILSVIAST 615
>gi|430811289|emb|CCJ31212.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 767
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 59 QLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERY 118
Q++V+ L +WRD +AR +DES YVLPN L++IA P A+ + + + +
Sbjct: 412 QVSVLISLHQWRDKVARQEDESVRYVLPNHILVQIAVNCPEDASSVLSICSHIPPLVRVH 471
Query: 119 MGPVLSIIKNSMQN 132
+ ++ II+++ Q+
Sbjct: 472 VDEIVQIIRSTKQD 485
>gi|46123343|ref|XP_386225.1| hypothetical protein FG06049.1 [Gibberella zeae PH-1]
Length = 807
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%)
Query: 46 HIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLR 105
+I+ +++Q +V L +WRD AR +DEST +VL NR + EIA+ P A L
Sbjct: 438 YIFKNSHMAFDSEQFSVFRALWKWRDDTARKEDESTNFVLGNRDISEIARINPPDAKALH 497
Query: 106 RLLKSKHSYIERYMGPVLSIIKNS 129
LL S + IK S
Sbjct: 498 SLLPLNASLARSRFNEIWGYIKES 521
>gi|414886886|tpg|DAA62900.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays]
Length = 960
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 21 EVYKRSYDVCRQLYEKEL-----LSENSYLHIYGLQGAGLNAQQLA----VVAGLCEWRD 71
E RS VC QLY KE+ S + + LQ G ++++ + +V C WRD
Sbjct: 321 EASHRSNMVCMQLYSKEIESPPGASSATSILSRNLQTHGFDSKKSSEVKDLVWKFCAWRD 380
Query: 72 VIARADDESTGYVLPNRTLIEIAKQLP 98
++AR DES YVLP++ + +A LP
Sbjct: 381 LMARMHDESLRYVLPDQAIAALAVSLP 407
>gi|401623674|gb|EJS41765.1| rrp6p [Saccharomyces arboricola H-6]
Length = 733
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V L +WRDVIAR DDES +V+PN+ L + PT + L ++ +
Sbjct: 440 VLVKNLYQWRDVIARRDDESPRFVMPNQLLAALVAYTPTDVIGVVSLTNGVTEHVRQNAN 499
Query: 121 PVLSIIKNSMQN 132
+ ++IKNS++N
Sbjct: 500 VLANLIKNSLRN 511
>gi|392566464|gb|EIW59640.1| hypothetical protein TRAVEDRAFT_147720 [Trametes versicolor
FP-101664 SS1]
Length = 850
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 19/134 (14%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGL-------------------QGAGLNAQQ 59
+ EV RS + + YEKEL ++ G +GA Q
Sbjct: 446 VREVLSRSEETALREYEKELYDTDTGAGPGGWDTLARKWNKASLMAVSSDREGATAVNVQ 505
Query: 60 LAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYM 119
AV + WRD IAR +DEST YVLPN L +A++ P A L + I R
Sbjct: 506 RAVYRTVHGWRDRIAREEDESTRYVLPNHYLFSLAERTPADMAALLSVFHPVPPVIRRRA 565
Query: 120 GPVLSIIKNSMQNA 133
+L I+++++ A
Sbjct: 566 KELLDAIRDTVKGA 579
>gi|406862035|gb|EKD15087.1| putative exosome complex exonuclease Rrp6 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 804
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
L+ +Q AV + WRD IAR DD+S +VLP ++ +AK +P + L+KS
Sbjct: 467 LSNEQFAVFRAVHGWRDKIARIDDDSPTFVLPQHAVLTLAKLMPMDMVGVLGLIKSGSHS 526
Query: 115 IERYMGPVLSIIKNSMQNAAN 135
++ +L +IK++ N
Sbjct: 527 VKSRAAELLDVIKSAKAQGKN 547
>gi|410081706|ref|XP_003958432.1| hypothetical protein KAFR_0G02660 [Kazachstania africana CBS 2517]
gi|372465020|emb|CCF59297.1| hypothetical protein KAFR_0G02660 [Kazachstania africana CBS 2517]
Length = 735
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGP 121
++ GL EWRD+IAR DDES Y++PN+ ++ + PT A + + Y+
Sbjct: 441 LLKGLFEWRDMIARRDDESPRYIMPNQLMVTLVAYTPTDPAGVISASQVVTDYVRSNSKI 500
Query: 122 VLSIIKNSMQNA 133
+ ++IKN++ A
Sbjct: 501 IANLIKNALTRA 512
>gi|414886885|tpg|DAA62899.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays]
Length = 951
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 21 EVYKRSYDVCRQLYEKEL-----LSENSYLHIYGLQGAGLNAQQLA----VVAGLCEWRD 71
E RS VC QLY KE+ S + + LQ G ++++ + +V C WRD
Sbjct: 321 EASHRSNMVCMQLYSKEIESPPGASSATSILSRNLQTHGFDSKKSSEVKDLVWKFCAWRD 380
Query: 72 VIARADDESTGYVLPNRTLIEIAKQLP 98
++AR DES YVLP++ + +A LP
Sbjct: 381 LMARMHDESLRYVLPDQAIAALAVSLP 407
>gi|118372761|ref|XP_001019575.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89301342|gb|EAR99330.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 881
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 1 MKIKLSSMP-KESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQ 59
++I+L S ++ +N+ + V +S +C + Y K +L + Y I Q L+ ++
Sbjct: 407 LRIQLVSKALQQGQNASHFIESVLNKSRAICLKKYVKPILDDEKYHSILQNQRIILSDRK 466
Query: 60 LAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYM 119
++ L EWR +A DE+ +VL N L I +LP T + K SY+ +Y
Sbjct: 467 FRILKRLLEWRYKMAAKYDENPTFVLANDILFNIVNRLPQTQKEFAS-SNLKLSYVCQYH 525
Query: 120 G-PVLSIIKNSMQ 131
+LSIIK ++
Sbjct: 526 ANEILSIIKEEIE 538
>gi|408396401|gb|EKJ75559.1| hypothetical protein FPSE_04202 [Fusarium pseudograminearum CS3096]
Length = 1034
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%)
Query: 46 HIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLR 105
+I+ +++Q +V L +WRD AR +DEST +VL NR + EIA+ P A L
Sbjct: 665 YIFKNSHMAFDSEQFSVFRALWKWRDDTARKEDESTNFVLGNRDISEIARINPPDAKALH 724
Query: 106 RLLKSKHSYIERYMGPVLSIIKNS 129
LL S + IK S
Sbjct: 725 SLLPLNASLARSRFNEIWGYIKES 748
>gi|340966615|gb|EGS22122.1| exosome complex exonuclease rrp6-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 859
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 18 PLTEVYKRSYDVCRQLYEKEL------LSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRD 71
P+ V KRS + Q YE + + + A N +Q AV + +WRD
Sbjct: 410 PIDRVIKRSKEESLQRYEHLTCDPETGIGARGWFNTLCKSPAAYNREQFAVYKAVHKWRD 469
Query: 72 VIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNS 129
+AR +DES Y + + L +IA+ LP+ L LL ++ Y+ + +I+ +
Sbjct: 470 DLARREDESPQYFMTQQILADIARILPSDKKALWSLLNHNAGVLKPYLDELFDLIQEA 527
>gi|409075144|gb|EKM75528.1| hypothetical protein AGABI1DRAFT_79866 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 882
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 21 EVYKRS-------YDVCRQLYEKELLSENSYLHIYGL-QGAGLNAQQLAVVAGLCEWRDV 72
EVY RS +D + + K L + S+ + +G + Q AV + WR+
Sbjct: 475 EVYDRSSGTGSNGWDTLARKWNKPLFTALSFSYQSSSDEGHNVPEMQKAVYRAVHWWRES 534
Query: 73 IARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH-SYIERYMGPVLSIIKNSMQ 131
++R +DEST YVLPN+ L IA+ P L RL S ++R +L +++N+++
Sbjct: 535 VSREEDESTRYVLPNQYLFRIAEAPPGDLGNLLRLFGSSVPVVVKRRAKELLDVVRNAVK 594
>gi|449304144|gb|EMD00152.1| hypothetical protein BAUCODRAFT_366269 [Baudoinia compniacensis
UAMH 10762]
Length = 774
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSEN------SYLHIYGLQGAGLNAQQLAVVAGLCEWRDV 72
L +V ++S + Q YE + + + + A L+ +Q +V + WRD
Sbjct: 391 LWDVLQKSSETALQRYEHPVYDFDLGQGTVGWYKLLARTSATLSKEQFSVFRAVHRWRDN 450
Query: 73 IARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
+AR D+S Y++ N + IAK +PTT A+L
Sbjct: 451 VAREQDDSAHYIMSNHHIFSIAKSMPTTKAEL 482
>gi|424513045|emb|CCO66629.1| exosome component 10 [Bathycoccus prasinos]
Length = 911
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 26/139 (18%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIY--------------------GLQGAGLNAQ 58
+ V+ +S DVC YE +++++ SY Q A L+ +
Sbjct: 412 IQSVFLKSRDVCLLTYEPQVITDLSYHEDLMKSANASSGGGSGHGNTLSRSAQQAQLSQE 471
Query: 59 QL------AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH 112
L A + L +WRD ARA+DES G+V+P ++ +A + P A + + +
Sbjct: 472 ILKSPVAQAAMEALFKWRDDCARANDESLGFVMPRHLMLRLASEQPKVARDVVSTARGES 531
Query: 113 SYIERYMGPVLSIIKNSMQ 131
S + ++ + IIK++++
Sbjct: 532 SLVAKFSHVIADIIKSAVE 550
>gi|320034794|gb|EFW16737.1| exosome complex exonuclease Rrp6 [Coccidioides posadasii str.
Silveira]
Length = 772
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
LN +QLAV + WRD AR DDE VL R L IA +P+ A L +L
Sbjct: 449 LNREQLAVFKAVHRWRDQTARTDDEGVQSVLSKRALFAIAHGMPSDQAGLLKLAIPVSPS 508
Query: 115 IERYMGPVLSIIKNS 129
+ + + +L +IK++
Sbjct: 509 LRKRLSELLKVIKDA 523
>gi|407923871|gb|EKG16934.1| hypothetical protein MPH_05915 [Macrophomina phaseolina MS6]
Length = 817
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 54 GLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHS 113
N +Q +V + +WRD +AR +DEST YV+ N L +A+ +P A L + +
Sbjct: 442 AFNKEQFSVFKAVHQWRDTVARQEDESTHYVMANHALFSVARSIPLDKAALFNVAQPISP 501
Query: 114 YIERYMGPVLSIIKNSMQNAAN----FEVIAQ 141
+ ++ II + + A+ +EV A+
Sbjct: 502 IVRLRADELVGIITRAKEAGADGPEMWEVFAK 533
>gi|367031894|ref|XP_003665230.1| hypothetical protein MYCTH_2308740 [Myceliophthora thermophila ATCC
42464]
gi|347012501|gb|AEO59985.1| hypothetical protein MYCTH_2308740 [Myceliophthora thermophila ATCC
42464]
Length = 860
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 1 MKIKLSSMPKESENSDTPLTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGL----- 55
++ +L+ + ++ P+ V ++S +V Q YE + + G +
Sbjct: 391 LRNELAELASQNNPDGNPIDRVIQKSKEVSLQRYEHPVCDPETGAGNRGWYNTLIKSPTL 450
Query: 56 -NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
N +Q AV + +WRD +AR +DES +++ + L +IA+ +PT L LL+S
Sbjct: 451 YNGEQFAVYKAVHKWRDDVARQEDESPFFIMTQQVLSDIARIIPTDMKALWSLLESNARG 510
Query: 115 IERYMGPVLSIIKNSMQNAANFEVIAQKLKE 145
++ + + +I+ + N + Q +E
Sbjct: 511 LKGRLEELFQVIQEARARGVNGPTMLQFFRE 541
>gi|303310683|ref|XP_003065353.1| exosome component 3'-5' exonuclease [Coccidioides posadasii C735
delta SOWgp]
gi|240105015|gb|EER23208.1| 3'-5' exonuclease family protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 766
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
LN +QLAV + WRD AR DDE VL R L IA +P+ A L +L
Sbjct: 449 LNREQLAVFKAVHRWRDQTARTDDEGVQSVLSKRALFAIAHGMPSDQAGLLKLAIPVSPS 508
Query: 115 IERYMGPVLSIIKNS 129
+ + + +L +IK++
Sbjct: 509 LRKRLSELLKVIKDA 523
>gi|402080291|gb|EJT75436.1| exosome complex exonuclease Rrp [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 834
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 53/97 (54%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH 112
+ ++Q AV L WRD AR +DES Y++ + L+E ++ +P++ +LR+L
Sbjct: 454 SNFTSEQFAVFRELHRWRDETARREDESPMYIMSQQVLVEASRAMPSSPNELRKLFFHPS 513
Query: 113 SYIERYMGPVLSIIKNSMQNAANFEVIAQKLKEERME 149
+ ++ + ++ +IK + + A + LK +R++
Sbjct: 514 NPLKDGVNQLVRLIKRAREKGAEGPTLMDVLKADRVD 550
>gi|367005124|ref|XP_003687294.1| hypothetical protein TPHA_0J00370 [Tetrapisispora phaffii CBS 4417]
gi|357525598|emb|CCE64860.1| hypothetical protein TPHA_0J00370 [Tetrapisispora phaffii CBS 4417]
Length = 743
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%)
Query: 57 AQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIE 116
+Q++ +V L EWRD IAR DDES Y++PN+ + + + +PT A + + + +
Sbjct: 433 SQKVELVKRLWEWRDTIARRDDESPRYIMPNQLIASLVEYVPTNPAGVISVNRMMTDPVR 492
Query: 117 RYMGPVLSIIKNSMQNAAN 135
+ ++IK+++++ N
Sbjct: 493 SNAKAIANLIKSTLEDMKN 511
>gi|358339908|dbj|GAA47879.1| exosome complex exonuclease RRP6, partial [Clonorchis sinensis]
Length = 1125
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 29 VCRQLYEKELLSENSYLHIYGLQGAG--LNAQQLAVVAGLCEWRDVIARADDESTGYVLP 86
+C + Y K YL +Y Q AG N +QL + L RD IAR +DES YVLP
Sbjct: 779 LCLKRYTKPAFDPLGYLSLYR-QAAGTSFNHRQLYALEQLYALRDSIARREDESVHYVLP 837
Query: 87 NRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNS 129
N L IA+ LP ++ L + +Y+ + II ++
Sbjct: 838 NHMLKTIAEVLPRESSGLFACCNPIPPLVRKYVHDLHKIIVDA 880
>gi|296815198|ref|XP_002847936.1| exosome component 3'-5' exonuclease [Arthroderma otae CBS 113480]
gi|238840961|gb|EEQ30623.1| ribosomal RNA processing 3'-5' exonuclease [Arthroderma otae CBS
113480]
Length = 810
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPT 99
L +Q AV L EWRD AR DDEST VL R+L IA+++P
Sbjct: 465 LTREQFAVFRALHEWRDKTARTDDESTQTVLSKRSLFRIAQEMPV 509
>gi|449453692|ref|XP_004144590.1| PREDICTED: uncharacterized protein LOC101204374 [Cucumis sativus]
Length = 877
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 5 LSSMPKESENSDTP-----LTEVYKRSYDVCRQLYEKEL--------LSENSYLHIYGLQ 51
L + + +ENS T L E +RS C QLY KE S H+
Sbjct: 277 LVELKQVNENSSTDDKFNFLLEASRRSNMTCLQLYSKETEGSPGESAASSIWSRHLNSQG 336
Query: 52 GAGL-NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
G+ L + + V LC WRD++AR DES YVL ++ ++ IA Q+P +L
Sbjct: 337 GSALISCKTQDRVRRLCAWRDLMARVHDESLRYVLSDQAIVAIAIQVPKNTGEL 390
>gi|453081050|gb|EMF09100.1| 3_5_exonuc-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 782
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 33 LYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIE 92
+Y+ EL + + A L +Q +V + +WRD +AR D+S Y++PN +
Sbjct: 420 VYDAELGQGAGWYRLLSRTSAMLTKEQFSVFRAVHQWRDEVAREQDDSVNYIMPNHQIFS 479
Query: 93 IAKQLP 98
IA+ +P
Sbjct: 480 IARAMP 485
>gi|449493231|ref|XP_004159228.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101225221 [Cucumis sativus]
Length = 877
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 5 LSSMPKESENSDTP-----LTEVYKRSYDVCRQLYEKEL--------LSENSYLHIYGLQ 51
L + + +ENS T L E +RS C QLY KE S H+
Sbjct: 277 LVELKQVNENSSTDDKFNFLLEASRRSNMTCLQLYSKETEGSPGESAASSIWSRHLNSQG 336
Query: 52 GAGL-NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
G+ L + + V LC WRD++AR DES YVL ++ ++ IA Q+P +L
Sbjct: 337 GSALISCKTQDRVRRLCAWRDLMARVHDESLRYVLSDQAIVAIAIQVPKNTGEL 390
>gi|242218119|ref|XP_002474853.1| predicted protein [Postia placenta Mad-698-R]
gi|220725980|gb|EED79945.1| predicted protein [Postia placenta Mad-698-R]
Length = 882
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL-------- 104
+G A Q AV + WRD IAR +DEST Y+LPN L +A++ P A L
Sbjct: 504 SGPLAMQRAVYRCVHAWRDRIAREEDESTRYILPNHYLFILAERPPADMAALLSTFQPVP 563
Query: 105 -------RRLLKSKHSYIERYMGPVLS 124
R LL + ++R +GP LS
Sbjct: 564 PVVRRRGRELLDAIRDAVKRTLGPELS 590
>gi|403218486|emb|CCK72976.1| hypothetical protein KNAG_0M01230 [Kazachstania naganishii CBS
8797]
Length = 738
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
+V L EWRD IAR DDES Y++PN+ LI ++ PT L
Sbjct: 442 LVKALYEWRDTIARRDDESPRYIMPNQLLISLSAYTPTDPVSL 484
>gi|242050364|ref|XP_002462926.1| hypothetical protein SORBIDRAFT_02g034580 [Sorghum bicolor]
gi|241926303|gb|EER99447.1| hypothetical protein SORBIDRAFT_02g034580 [Sorghum bicolor]
Length = 760
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 21 EVYKRSYDVCRQLYEKEL-----LSENSYLHIYGLQGAGLNAQQLA----VVAGLCEWRD 71
E RS VC QLY KE+ S + + LQ GL++++ + +V C WRD
Sbjct: 197 EASHRSNMVCMQLYAKEIECPPGASSAASILSRNLQTHGLDSKKSSEVKDLVWKFCAWRD 256
Query: 72 VIARADDESTGYVLPNRTLIEIAKQLP 98
++AR DES YVL ++ + +A LP
Sbjct: 257 LMARMHDESLRYVLSDQAIAALAVSLP 283
>gi|340518928|gb|EGR49168.1| predicted protein [Trichoderma reesei QM6a]
Length = 818
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 54 GLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLL 108
G ++Q AV L +WRDV AR +DE+ +VL L++IA+ P A L LL
Sbjct: 447 GYKSEQFAVFRALWKWRDVTARTEDENPNFVLGTNNLVDIARANPPDAKALHSLL 501
>gi|426195548|gb|EKV45477.1| hypothetical protein AGABI2DRAFT_186278 [Agaricus bisporus var.
bisporus H97]
Length = 870
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 21 EVYKRS-------YDVCRQLYEKELLSENSYLHIYGL-QGAGLNAQQLAVVAGLCEWRDV 72
EVY RS +D + + K L + S+ + +G + Q AV + WR+
Sbjct: 469 EVYDRSSGTGSNGWDTLARKWNKPLFTALSFSYQSSSDEGHSVPEMQKAVYRAVHWWRES 528
Query: 73 IARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH-SYIERYMGPVLSIIKNSMQ 131
++R +DEST YVLPN+ L IA+ P L RL S ++R +L +++++++
Sbjct: 529 VSREEDESTRYVLPNQYLFRIAEAPPGDLGNLLRLFGSSVPVVVKRRAKELLDVVRDAVK 588
>gi|449548764|gb|EMD39730.1| hypothetical protein CERSUDRAFT_112032 [Ceriporiopsis subvermispora
B]
Length = 850
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 59 QLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERY 118
Q AV + WRD ++RA+DEST YVLPN L +A++ P A L L + + R
Sbjct: 499 QRAVYRAVHAWRDRVSRAEDESTRYVLPNHALFALAERTPADMAALLALFRPVPPVVRRR 558
Query: 119 MGPVLSIIKNSMQNAAN--FEVIAQKLKEE-------RMEVASEETEV 157
+L ++ +++ A EV A ++ E R EV +E EV
Sbjct: 559 AQELLDTVRAAVKEALGGPVEVPATEVVETEKVDSDVREEVDTEAVEV 606
>gi|169767462|ref|XP_001818202.1| exosome component 3'-5' exonuclease [Aspergillus oryzae RIB40]
gi|83766057|dbj|BAE56200.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871959|gb|EIT81108.1| exosome 3'-5' exoribonuclease [Aspergillus oryzae 3.042]
Length = 760
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 6/150 (4%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH 112
A L+ +Q AV + +WRD +AR +DE V P L ++A +P L R L
Sbjct: 439 AVLSKEQFAVFKAVHQWRDAVAREEDEGVQCVFPKHVLFKVAHAMPLDLGTLFRTLSPVT 498
Query: 113 SYIERYMGPVLSIIKNSMQNAAN----FEVIAQKLKEERMEVASEETEVLVLDTSSNLKI 168
+ +L++IKN+ A+ +V + + R A+E + LV
Sbjct: 499 PIAKDRAADLLAVIKNAKIEGADGPEWRDVYVKPTRAGRSVPATETEQGLVTPPIGEENF 558
Query: 169 PNVGRESVDGV-DALVGTTMP-HPPAYTQL 196
P R V A++ T P PP Y+ +
Sbjct: 559 PTAARCEVSQFWGAVLDTREPLTPPEYSAV 588
>gi|452837795|gb|EME39736.1| hypothetical protein DOTSEDRAFT_138360 [Dothistroma septosporum
NZE10]
Length = 784
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSE------NSYLHIYGLQGAGLNAQQLAVVAGLCEWRDV 72
+ +V ++S +V Q YE + + + A + +Q +V + +WRD
Sbjct: 405 VWDVLQKSNEVALQKYEHPIYDAELGQGAGGWYKMLARTPALFSKEQFSVFRAVHKWRDD 464
Query: 73 IARADDESTGYVLPNRTLIEIAKQLP 98
+AR D+ST YV+PN ++ IAK +P
Sbjct: 465 VAREQDDSTHYVMPNHQVLSIAKAMP 490
>gi|339252698|ref|XP_003371572.1| exosome component 10 [Trichinella spiralis]
gi|316968157|gb|EFV52483.1| exosome component 10 [Trichinella spiralis]
Length = 827
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 22 VYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDEST 81
V KRS D C Q+Y+K+ +E + L+ +Q + L WRD +AR DES
Sbjct: 434 VLKRSSDTCLQVYKKKFPNEFELRKLESKFPFNLDNRQKYALRMLYYWRDGVARITDESV 493
Query: 82 GYVLPNRTLIEIAKQLP 98
Y++ N TL +A +LP
Sbjct: 494 YYIMRNETLRNLAAKLP 510
>gi|302501205|ref|XP_003012595.1| exosome complex exonuclease Rrp6, putative [Arthroderma benhamiae
CBS 112371]
gi|291176154|gb|EFE31955.1| exosome complex exonuclease Rrp6, putative [Arthroderma benhamiae
CBS 112371]
Length = 1069
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
L +Q AV L EWRD IARADDES VL R L +A+++P
Sbjct: 660 VALTREQFAVFRALHEWRDRIARADDESPQTVLSKRALFRLAQEMP 705
>gi|398390487|ref|XP_003848704.1| hypothetical protein MYCGRDRAFT_76687 [Zymoseptoria tritici IPO323]
gi|339468579|gb|EGP83680.1| hypothetical protein MYCGRDRAFT_76687 [Zymoseptoria tritici IPO323]
Length = 796
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSEN------SYLHIYGLQGAGLNAQQLAVVAGLCEWRDV 72
L +V ++S +V Q YE + + A + +Q AV + WRD
Sbjct: 405 LWDVLQKSTEVALQRYEHPQYDAELGQGAMGWYKLLSRTPALFSPEQFAVFKAVHHWRDR 464
Query: 73 IARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQN 132
+AR D+S +V+PN + +AK +P T L + + + +LS+I + +
Sbjct: 465 VAREQDDSIHFVMPNHQIFSLAKAMPPTRLALMGIAQPTTQTVRLRADELLSVIVRAQEA 524
Query: 133 AAN 135
N
Sbjct: 525 GKN 527
>gi|392550649|ref|ZP_10297786.1| RNase D, processing tRNA s [Pseudoalteromonas spongiae
UST010723-006]
Length = 375
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Query: 41 ENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTT 100
E +YL I LN +QLAV+ L WR AR + + +++ L EIAK PT
Sbjct: 196 ELAYLDIKN--AWQLNPKQLAVLQQLAAWRLNRAREKNLALNFIVKEHILFEIAKTQPTH 253
Query: 101 AAKLRRLLKSKHSYIERYMGPVLSIIK-----------NSMQNAANFEVIAQKLKEERME 149
L+RL + + RY +L+++K +Q +F + LKE R E
Sbjct: 254 FGALKRLCEGDQGLLNRYGKTLLNLVKIGLDKDEAEHPEKIQRLIDFHGYKKTLKELRAE 313
Query: 150 V 150
+
Sbjct: 314 L 314
>gi|356515280|ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791485 [Glycine max]
Length = 873
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 4 KLSSMPKESENSDTPL---TEVYKRSYDVCRQLYEKELLS---ENSYLHIY-------GL 50
+L + E+ +SD E +RS +C QL++KE+ + E+S L ++ G
Sbjct: 285 ELKQLDNENSSSDDKFHFVLEASRRSNMICLQLFKKEIEASPGESSALSLFSRRVSSHGF 344
Query: 51 QGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQ 96
AQ +V LC WRD++AR DES YVL ++ ++ +A Q
Sbjct: 345 PSISNEAQN--IVRQLCTWRDLMARIHDESLKYVLSDQAIVALASQ 388
>gi|119195137|ref|XP_001248172.1| exosome component 3'-5' exonuclease [Coccidioides immitis RS]
gi|392862584|gb|EAS36760.2| exosome complex exonuclease Rrp6 [Coccidioides immitis RS]
Length = 766
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
L +QLAV + WRD AR DDE VL R L IA +P+ A L +L
Sbjct: 449 LKREQLAVFKAVHRWRDQTARTDDEGVQSVLSKRALFAIAHGMPSDQAALLKLAIPVSPS 508
Query: 115 IERYMGPVLSIIKNS 129
+ + + +L +IK++
Sbjct: 509 LRKRLSELLKVIKDA 523
>gi|357116782|ref|XP_003560156.1| PREDICTED: uncharacterized protein LOC100837522 [Brachypodium
distachyon]
Length = 909
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 19 LTEVYKRSYDVCRQLYEKEL-----LSENSYLHIYGLQGAGLNAQQLA----VVAGLCEW 69
E +RS VC QLY KE+ S + + LQ GL++++ + +V C W
Sbjct: 326 FLEASRRSNMVCMQLYAKEIECPPGASSAASILSRNLQTHGLDSKKSSEVKDLVRKFCAW 385
Query: 70 RDVIARADDESTGYVLPNRTLIEIAKQLP 98
RD++AR DES Y+L ++ + +A +P
Sbjct: 386 RDLMARMHDESLRYILSDQAIASLAVSVP 414
>gi|448519311|ref|XP_003868060.1| Rrp6 nuclear exosome exonuclease component [Candida orthopsilosis
Co 90-125]
gi|380352399|emb|CCG22625.1| Rrp6 nuclear exosome exonuclease component [Candida orthopsilosis]
Length = 814
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 30/162 (18%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAK-QLPTTAAKLRRLLKSKHSYIERYMG 120
VV L +WRD+IAR +DES Y++PN+ L+ +A + P A K+ + SY+ ++
Sbjct: 505 VVEQLYKWRDLIARQEDESVRYIMPNQLLVSLATLESPVDAGKVLNV----PSYVSEHVR 560
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVDGVD 180
N+ + A E+I Q LKE SE+ + ++D +N V + VD ++
Sbjct: 561 ------LNARELA---ELIDQTLKE------SEQNDWAIVDKWNNQSTVQVEEQKVD-IE 604
Query: 181 ALVGTTMPHPPAYTQLKQEPPKVGSSVAELDRNGLGSFAHPG 222
A+ G QL Q K+ + + L+ N S A PG
Sbjct: 605 AVNGLL-------DQLLQNSAKLFTEDSLLNNN--SSVAIPG 637
>gi|261206146|ref|XP_002627810.1| exosome component 3'-5' exonuclease [Ajellomyces dermatitidis
SLH14081]
gi|239592869|gb|EEQ75450.1| exosome complex exonuclease Rrp6 [Ajellomyces dermatitidis
SLH14081]
Length = 814
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIER 117
+Q AV + +WRD IAR++DE YVL ++L +IA +P A L R + +
Sbjct: 453 EQFAVFRAVHQWRDKIARSEDEGVQYVLSKQSLFKIAHAMPLDPASLLRTISPVSPLVRA 512
Query: 118 YMGPVLSIIKNS 129
++ +IK +
Sbjct: 513 RASELVQVIKQA 524
>gi|239610958|gb|EEQ87945.1| exosome complex exonuclease Rrp6 [Ajellomyces dermatitidis ER-3]
gi|327351664|gb|EGE80521.1| exosome complex exonuclease Rrp6 [Ajellomyces dermatitidis ATCC
18188]
Length = 814
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIER 117
+Q AV + +WRD IAR++DE YVL ++L +IA +P A L R + +
Sbjct: 453 EQFAVFRAVHQWRDKIARSEDEGVQYVLSKQSLFKIAHAMPLDPASLLRTISPVSPLVRA 512
Query: 118 YMGPVLSIIKNS 129
++ +IK +
Sbjct: 513 RASELVQVIKQA 524
>gi|311739578|ref|ZP_07713413.1| ribonuclease D [Corynebacterium pseudogenitalium ATCC 33035]
gi|311305394|gb|EFQ81462.1| ribonuclease D [Corynebacterium pseudogenitalium ATCC 33035]
Length = 414
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 56 NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
+ +QLA L RD IAR D + G VL N+TL+EIA+ LPTTA +L R+
Sbjct: 222 SGRQLAAARELWFKRDAIARRTDTAPGRVLANKTLVEIARTLPTTAGELARV 273
>gi|226288046|gb|EEH43559.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 826
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIER 117
+Q AV + +WRD +AR++DE Y+L ++L +IA +P A L R + +
Sbjct: 452 EQFAVFRAVHQWRDKLARSEDEGVQYILSKQSLFKIAHAMPLDPASLFRTISPVSPPVRA 511
Query: 118 YMGPVLSIIK 127
M ++ +IK
Sbjct: 512 RMSELVQVIK 521
>gi|295659299|ref|XP_002790208.1| exosome component 3'-5' exonuclease [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226281913|gb|EEH37479.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 827
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIER 117
+Q AV + +WRD +AR++DE Y+L ++L +IA +P A L R + +
Sbjct: 452 EQFAVFKAVHQWRDKLARSEDEGVQYILSKQSLFKIAHAMPLDPASLLRTISPVSPPVRA 511
Query: 118 YMGPVLSIIK 127
M ++ +IK
Sbjct: 512 RMSELVQVIK 521
>gi|145252306|ref|XP_001397666.1| exosome component 3'-5' exonuclease [Aspergillus niger CBS 513.88]
gi|134083214|emb|CAK42852.1| unnamed protein product [Aspergillus niger]
gi|350633598|gb|EHA21963.1| hypothetical protein ASPNIDRAFT_49025 [Aspergillus niger ATCC 1015]
Length = 782
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 37 ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQ 96
+LLS NS + +N +Q AV + +WRD +AR +DE V P L +A
Sbjct: 440 DLLSRNSVV---------VNREQFAVFKAVHQWRDEVAREEDEGVQCVFPKHVLFRVAHT 490
Query: 97 LPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAAN 135
+P L R L ++ +L +IK + A+
Sbjct: 491 MPLDLGTLFRTLSPVTPIVQNRAVDLLEVIKKAKDEGAD 529
>gi|121705450|ref|XP_001270988.1| exosome component 3'-5' exonuclease [Aspergillus clavatus NRRL 1]
gi|119399134|gb|EAW09562.1| exosome complex exonuclease Rrp6, putative [Aspergillus clavatus
NRRL 1]
Length = 778
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH 112
A L+ +Q AV + +WRD +AR +DE V P L +IA+ +P L R L
Sbjct: 449 AVLSKEQFAVFKAVHQWRDEVAREEDEGVQCVFPKHVLFKIAQSMPLDQGTLFRTLSPMT 508
Query: 113 SYIERYMGPVLSIIKNS 129
+ +L +IK +
Sbjct: 509 PIVRDRAATLLEVIKQA 525
>gi|366995964|ref|XP_003677745.1| hypothetical protein NCAS_0H00860 [Naumovozyma castellii CBS 4309]
gi|342303615|emb|CCC71396.1| hypothetical protein NCAS_0H00860 [Naumovozyma castellii CBS 4309]
Length = 755
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIER 117
Q+ ++ L +WRD IAR DDES +V+PN+ L+ + P A + + S Y+
Sbjct: 442 QKEPLLKELYQWRDKIARRDDESPRFVMPNQLLVSLVAYTPIDAPGVVSVSNSVTDYVRS 501
Query: 118 YMGPVLSIIKNSMQNAANFEVIAQKLKEERMEVASE 153
+ ++IKN + + + + + EE + V E
Sbjct: 502 NSKILANLIKNCLAKMKDNKFLDNNVAEEGISVVPE 537
>gi|171679581|ref|XP_001904737.1| hypothetical protein [Podospora anserina S mat+]
gi|170939416|emb|CAP64644.1| unnamed protein product [Podospora anserina S mat+]
Length = 628
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 39 LSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
L+ +SY++ N ++ AV L WRD AR +DESTG+V+ + EI + +P
Sbjct: 225 LARSSYVY---------NKEEFAVFRALWNWRDKTAREEDESTGFVMKEHVMAEIVRVMP 275
Query: 99 TTAAKLRRLL 108
+ L LL
Sbjct: 276 SDKKALWSLL 285
>gi|300123910|emb|CBK25181.2| Exonuclease RRP6 [Blastocystis hominis]
Length = 663
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGP 121
V A L WRD +AR DES ++LP +L ++A LP A L RLL+ + I +
Sbjct: 291 VFALLFFWRDALAREMDESPQFILPQISLSKLAHNLPRNTADLFRLLQPVPAVIRSHARE 350
Query: 122 VLSIIKN-----SMQNAANFEVIAQ 141
++ +++ S++ AA E + Q
Sbjct: 351 IVELVQRGLEGVSLEEAAIREAVWQ 375
>gi|396483292|ref|XP_003841672.1| similar to exosome complex exonuclease Rrp6 [Leptosphaeria maculans
JN3]
gi|312218247|emb|CBX98193.1| similar to exosome complex exonuclease Rrp6 [Leptosphaeria maculans
JN3]
Length = 783
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 16/126 (12%)
Query: 21 EVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG-----------LNAQQLAVVAGLCEW 69
+V ++S + Q YE + E +GL G QQ AV + +W
Sbjct: 399 DVLEKSKETALQRYEHPVYDEK-----FGLGTGGWYKLISRTPVQFTPQQFAVFRAVHQW 453
Query: 70 RDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNS 129
RD ++R +DES +++PN + +A+ +P+ + L ++ I ++ +I +
Sbjct: 454 RDELSRQEDESPLFIMPNHAVFSVARAMPSDKSALYNAVQHVSHIIRARADDLVRVITKA 513
Query: 130 MQNAAN 135
Q N
Sbjct: 514 KQEGVN 519
>gi|225679037|gb|EEH17321.1| exosome component 10 [Paracoccidioides brasiliensis Pb03]
Length = 827
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIER 117
+Q AV + +WRD +AR++DE Y+L ++L +IA +P A L R + +
Sbjct: 452 EQFAVFRAVHQWRDKLARSEDEGVQYILSKQSLFKIAHAMPLDPASLFRTISPVSPPVRA 511
Query: 118 YMGPVLSIIK 127
M ++ +IK
Sbjct: 512 RMSELVQVIK 521
>gi|255325116|ref|ZP_05366222.1| ribonuclease D [Corynebacterium tuberculostearicum SK141]
gi|255297681|gb|EET76992.1| ribonuclease D [Corynebacterium tuberculostearicum SK141]
Length = 414
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 56 NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
+ QLA L RD IAR D + G VL N+TL+EIA+ LPTTA +L R+
Sbjct: 222 SGSQLAAARELWFKRDAIARRTDTAPGRVLANKTLVEIARTLPTTAGELARV 273
>gi|358368335|dbj|GAA84952.1| exosome complex exonuclease Rrp6 [Aspergillus kawachii IFO 4308]
Length = 784
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 37 ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQ 96
+LLS NS + +N +Q AV + +WRD +AR +DE V P L +A
Sbjct: 440 DLLSRNSVV---------VNREQFAVFKAVHQWRDEVAREEDEGVQCVFPKHVLFRVAHT 490
Query: 97 LPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAA 134
+P L R L ++ +L +IK + A
Sbjct: 491 MPLDLGTLFRTLSPVTPIVQNRAVDLLEVIKKAKDEGA 528
>gi|71657562|ref|XP_817295.1| ribosomal RNA processing protein 6 [Trypanosoma cruzi strain CL
Brener]
gi|70882476|gb|EAN95444.1| ribosomal RNA processing protein 6, putative [Trypanosoma cruzi]
Length = 768
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 19 LTEVYKRSYDVCRQLYEK-ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L V S + ++YEK +L + SY G GL++ Q+ V + WRD IAR
Sbjct: 447 LVHVLNESRRLSLEIYEKPQLDPDASYKIALGRSLGGLSSMQMKVAREIFNWRDAIAREV 506
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAA 134
D+S VL ++ IA +LPT+A + + + + ++ I+K+S+ + A
Sbjct: 507 DDSPPAVLHLSAVLAIATKLPTSANDVLKCCTPVSMVVRTNVTRLVQIVKDSLGDDA 563
>gi|358394505|gb|EHK43898.1| hypothetical protein TRIATDRAFT_172602, partial [Trichoderma
atroviride IMI 206040]
Length = 816
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 54 GLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLL 108
G ++Q A+ L WRD+ AR +DE+ +VL N L EI + P A L LL
Sbjct: 444 GYKSEQFAIFRALWNWRDLTARKEDENPNFVLGNNNLTEIVRVNPPDAKALHSLL 498
>gi|51013151|gb|AAT92869.1| YOR001W [Saccharomyces cerevisiae]
Length = 733
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V L +WRD+IAR DDES +V+PN+ L + PT + L ++ +
Sbjct: 440 VLVRELYQWRDLIARRDDESPRFVMPNQLLAALVAYTPTDVIGVVSLTNGVTEHVRQNAK 499
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEV--LVLDTSSNLKIPNV 171
+ ++I+++++N N EE + S ET+ ++L+T S +I +V
Sbjct: 500 LLANLIRDALRNIKN-------TNEEATPIPSSETKADGILLETISVPQIRDV 545
>gi|323335702|gb|EGA76985.1| Rrp6p [Saccharomyces cerevisiae Vin13]
Length = 733
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V L +WRD+IAR DDES +V+PN+ L + PT + L ++ +
Sbjct: 440 VLVRELYQWRDLIARRDDESPRFVMPNQLLAALVAYTPTDVXGVVSLTNGVTEHVRQNAK 499
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEV--LVLDTSSNLKIPNV 171
+ ++I+++++N N EE + S ET+ ++L+T S +I +V
Sbjct: 500 LLANLIRDALRNIKN-------TNEEATPIPSSETKADGILLETISVPQIRDV 545
>gi|6324574|ref|NP_014643.1| Rrp6p [Saccharomyces cerevisiae S288c]
gi|14195186|sp|Q12149.1|RRP6_YEAST RecName: Full=Exosome complex exonuclease RRP6; AltName:
Full=Ribosomal RNA-processing protein 6
gi|1150996|gb|AAC49480.1| hypothetical protein UNC733 [Saccharomyces cerevisiae]
gi|1420088|emb|CAA99189.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285814890|tpg|DAA10783.1| TPA: Rrp6p [Saccharomyces cerevisiae S288c]
Length = 733
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V L +WRD+IAR DDES +V+PN+ L + PT + L ++ +
Sbjct: 440 VLVRELYQWRDLIARRDDESPRFVMPNQLLAALVAYTPTDVIGVVSLTNGVTEHVRQNAK 499
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEV--LVLDTSSNLKIPNV 171
+ ++I+++++N N EE + S ET+ ++L+T S +I +V
Sbjct: 500 LLANLIRDALRNIKN-------TNEEATPIPSSETKADGILLETISVPQIRDV 545
>gi|151945630|gb|EDN63871.1| ribosomal RNA processing protein [Saccharomyces cerevisiae YJM789]
gi|190407342|gb|EDV10609.1| exosome complex exonuclease RRP6 [Saccharomyces cerevisiae RM11-1a]
gi|207341289|gb|EDZ69386.1| YOR001Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274006|gb|EEU08922.1| Rrp6p [Saccharomyces cerevisiae JAY291]
gi|259149485|emb|CAY86289.1| Rrp6p [Saccharomyces cerevisiae EC1118]
Length = 733
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V L +WRD+IAR DDES +V+PN+ L + PT + L ++ +
Sbjct: 440 VLVRELYQWRDLIARRDDESPRFVMPNQLLAALVAYTPTDVIGVVSLTNGVTEHVRQNAK 499
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEV--LVLDTSSNLKIPNV 171
+ ++I+++++N N EE + S ET+ ++L+T S +I +V
Sbjct: 500 LLANLIRDALRNIKN-------TNEEATPIPSSETKADGILLETISVPQIRDV 545
>gi|378728924|gb|EHY55383.1| exosome complex exonuclease Rrp6 [Exophiala dermatitidis
NIH/UT8656]
Length = 820
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTT 100
+ +Q V + EWRD AR DE YVLPNR L +IA+ +PT+
Sbjct: 440 FDNEQFGVFRAVHEWRDRKARELDEGLQYVLPNRVLWQIAETMPTS 485
>gi|365763245|gb|EHN04775.1| Rrp6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 733
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V L +WRD+IAR DDES +V+PN+ L + PT + L ++ +
Sbjct: 440 VLVRELYQWRDLIARRDDESPRFVMPNQLLAALVAYTPTDVIGVVSLTNGVTEHVRQNAK 499
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEV--LVLDTSSNLKIPNV 171
+ ++I+++++N N EE + S ET+ ++L+T S +I +V
Sbjct: 500 LLANLIRDALRNIKN-------TNEEATPIPSSETKADGILLETISVPQIRDV 545
>gi|255566405|ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative [Ricinus communis]
Length = 977
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 16/98 (16%)
Query: 19 LTEVYKRSYDVCRQLYEKE------------LLSENSYLHIYGLQGAGLNAQQLAVVAGL 66
+ E +RS +C QLY KE L S YL+ G G+ ++ + +V L
Sbjct: 309 ILEASRRSNMICMQLYTKEVEEFPGDAAASSLFSR--YLNDQG--GSSVSCEIQDLVRRL 364
Query: 67 CEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
C WR+++AR DE +VL ++ ++ +A ++ T A ++
Sbjct: 365 CTWRELMARVHDEGLRFVLSDQAIVSLANKVSTNAMEI 402
>gi|260950129|ref|XP_002619361.1| hypothetical protein CLUG_00520 [Clavispora lusitaniae ATCC 42720]
gi|238846933|gb|EEQ36397.1| hypothetical protein CLUG_00520 [Clavispora lusitaniae ATCC 42720]
Length = 738
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Query: 42 NSYLHIYGLQG--------AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEI 93
++++H YG G + +++ +V L WRD +AR DEST Y++ N+ L +
Sbjct: 420 DNWMHSYGGMGQERWVMNQYNIEPERIEIVQALINWRDKVAREKDESTRYIMSNQVLANL 479
Query: 94 AKQL-PTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSM----QNAANFEVIAQKLKEERM 148
+ + P A+K+ S++S + + + +I+ + +A N V + L E
Sbjct: 480 SSLVAPVDASKVHNAAGSQYSIVRQNSKELAELIEKYLATVGHSANNENVTSFDLTEVNY 539
Query: 149 EVASE 153
+ ASE
Sbjct: 540 DKASE 544
>gi|327308500|ref|XP_003238941.1| exosome component 3'-5' exonuclease [Trichophyton rubrum CBS
118892]
gi|326459197|gb|EGD84650.1| exosome complex exonuclease Rrp6 [Trichophyton rubrum CBS 118892]
Length = 867
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
L +Q AV L EWRD ARADDES VL R L +A+++P + R+
Sbjct: 475 VALTREQFAVFRALHEWRDKTARADDESPQTVLSKRALFRLAQEMPEDKFAVLRM 529
>gi|90416003|ref|ZP_01223936.1| ribonuclease D [gamma proteobacterium HTCC2207]
gi|90332377|gb|EAS47574.1| ribonuclease D [gamma proteobacterium HTCC2207]
Length = 374
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 42 NSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTA 101
+ YL + G L+A LAV+ LCEWR+ ARA D+ +++ + L+E+A PT
Sbjct: 200 DYYLRVKG--AWRLDALSLAVLKRLCEWRERAARALDKPRSHIVKDNVLLELANNKPTHM 257
Query: 102 AKLRRLLKSKHSYIERYMGPVLSIIKNSMQN 132
++L ++ ++R+ VL I N N
Sbjct: 258 SQLHQIDDWYSRSVKRFGEQVLQEIANVDHN 288
>gi|302657746|ref|XP_003020587.1| exosome complex exonuclease Rrp6, putative [Trichophyton verrucosum
HKI 0517]
gi|291184437|gb|EFE39969.1| exosome complex exonuclease Rrp6, putative [Trichophyton verrucosum
HKI 0517]
Length = 881
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
L +Q AV L EWRD ARADDES VL R L +A+++P
Sbjct: 477 VALTREQFAVFRALHEWRDKTARADDESPQTVLSKRALFRLAQEMP 522
>gi|349581166|dbj|GAA26324.1| K7_Rrp6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 733
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V L +WRD+IAR DDES +V+PN+ L + PT + L ++ +
Sbjct: 440 VLVRELYQWRDLIARRDDESPRFVMPNQLLAALVAYTPTDVIGVVSLTNGVTEHVRQNAK 499
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEV--LVLDTSS 164
+ ++I+++++N N EE + S ET+ ++L+T S
Sbjct: 500 LLANLIRDALRNIKN-------TNEEATPIPSSETKADGILLETIS 538
>gi|326473059|gb|EGD97068.1| hypothetical protein TESG_04488 [Trichophyton tonsurans CBS 112818]
Length = 898
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
L +Q AV L EWRD ARADDES VL R L +A+++P + R+ +
Sbjct: 448 LTREQFAVFRALHEWRDKTARADDESPQTVLSKRALFRLAQEMPEDKFAVLRMGSPVSAS 507
Query: 115 IERYMGPVLSIIKNSMQNAA 134
+ V +I+ + Q
Sbjct: 508 LRSRTDEVAGLIREARQQGG 527
>gi|444314737|ref|XP_004178026.1| hypothetical protein TBLA_0A07170 [Tetrapisispora blattae CBS 6284]
gi|387511065|emb|CCH58507.1| hypothetical protein TBLA_0A07170 [Tetrapisispora blattae CBS 6284]
Length = 771
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAA 102
+V L EWRD+IAR DDES Y++P + LI + PT ++
Sbjct: 466 LVQKLWEWRDMIARRDDESPRYIMPTQVLISLISYTPTDSS 506
>gi|326477901|gb|EGE01911.1| exosome complex exonuclease Rrp6 [Trichophyton equinum CBS 127.97]
Length = 824
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
L +Q AV L EWRD ARADDES VL R L +A+++P
Sbjct: 468 VALTREQFAVFRALHEWRDKTARADDESPQTVLSKRALFRLAQEMP 513
>gi|374106609|gb|AEY95518.1| FACL001Cp [Ashbya gossypii FDAG1]
Length = 745
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGP 121
++ L EWRD +AR DDES YV+PN+ L+ + P+ A + + Y+
Sbjct: 441 LLKKLYEWRDTVARRDDESVRYVMPNQLLVSLVSLSPSETAGVLSVSTYVTDYVRSNART 500
Query: 122 VLSIIKNSMQ 131
+ ++IK +++
Sbjct: 501 LANLIKRTLE 510
>gi|255934162|ref|XP_002558362.1| Pc12g15620 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582981|emb|CAP81189.1| Pc12g15620 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 756
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 44 YLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAK 103
+ + A L+ +Q AV + +WRD +ARA+DE V P L ++A +P
Sbjct: 432 WYDLLWRHSANLSKEQFAVFKAVHQWRDEVARAEDEGWQCVFPKHMLFKLATVMPLDMGS 491
Query: 104 LRRLLKSKHSYIERYMGPVLSIIKNS 129
L R L + +L +IK +
Sbjct: 492 LFRTLSPMTPITKERSHDLLEVIKKA 517
>gi|358385873|gb|EHK23469.1| hypothetical protein TRIVIDRAFT_123406, partial [Trichoderma virens
Gv29-8]
Length = 821
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 54 GLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLL 108
G + Q A+ L +WRDV AR +DE+ +VL L EIA+ P A LL
Sbjct: 447 GYKSDQFAIFRALWKWRDVTARTEDENPNFVLGTSNLTEIARANPPDAKAFHSLL 501
>gi|302306959|ref|NP_983403.2| ACL001Cp [Ashbya gossypii ATCC 10895]
gi|299788769|gb|AAS51227.2| ACL001Cp [Ashbya gossypii ATCC 10895]
Length = 745
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGP 121
++ L EWRD +AR DDES YV+PN+ L+ + P+ A + + Y+
Sbjct: 441 LLKKLYEWRDTVARRDDESVRYVMPNQLLVSLVSLSPSETAGVLSVSTYVTDYVRSNART 500
Query: 122 VLSIIKNSMQ 131
+ ++IK +++
Sbjct: 501 LANLIKRTLE 510
>gi|88800842|ref|ZP_01116397.1| ribonuclease D [Reinekea blandensis MED297]
gi|88776415|gb|EAR07635.1| ribonuclease D [Reinekea sp. MED297]
Length = 380
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 50 LQGAG-LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLL 108
L+GA L ++L V+ LCEWR+ +ARA + + G +L ++ LI +A+++PT+ + L++ +
Sbjct: 204 LRGAWKLKGERLLVLQLLCEWRENLARATNSNRGRILQDKDLITLAEKMPTSRSMLQKQV 263
Query: 109 KSKHSYIERYMGPVLSIIKNS 129
I Y ++++I+ +
Sbjct: 264 NIPSRKIRLYGDELIAMIERA 284
>gi|322700217|gb|EFY91973.1| exosome complex exonuclease Rrp [Metarhizium acridum CQMa 102]
Length = 831
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 44 YLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAK 103
Y +++ LN +Q ++ L +WRD AR +DES +VL + EIA+ P
Sbjct: 437 YNYVFKHSHLALNGEQFSIFKALWKWRDETARQEDESPNFVLGATNVTEIARVNPPDVKA 496
Query: 104 LRRLL 108
L LL
Sbjct: 497 LHSLL 501
>gi|387814091|ref|YP_005429574.1| ribonuclease D [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381339104|emb|CCG95151.1| ribonuclease D [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 383
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 41 ENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTT 100
E YL + G G LN +Q AV+ L WR+ R D VL + LI IA++LP++
Sbjct: 211 EQHYLKLRG--GWTLNREQQAVLRALVAWREQECRRQDRPRNRVLNDGLLIAIAERLPSS 268
Query: 101 AAKLRRLLKSKHSYIERYMGPVLSIIKNS 129
AA +R + +++RY ++ +++ +
Sbjct: 269 AAVIRDVQGVPGGFVKRYGEQLVELVQAA 297
>gi|381152499|ref|ZP_09864368.1| ribonuclease D [Methylomicrobium album BG8]
gi|380884471|gb|EIC30348.1| ribonuclease D [Methylomicrobium album BG8]
Length = 387
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 37 ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQ 96
E+L E+++ I G L +QL+++ L EWR+ A+ ++ G++L + L +IAK
Sbjct: 196 EVLPEHAWRRIKG--KNKLTGKQLSIIQALAEWRESTAQNENRPKGWLLRDELLFDIAKL 253
Query: 97 LPTTAAKLRRLLKSKHSYIERYMGPVLSII 126
P TAA L ++ + RY + II
Sbjct: 254 QPETAADLAKIRGINERTVSRYGAALCRII 283
>gi|407850984|gb|EKG05126.1| hypothetical protein TCSYLVIO_003804 [Trypanosoma cruzi]
Length = 713
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 19 LTEVYKRSYDVCRQLYEK-ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L V S + ++YEK +L + SY G GL++ Q+ V + WRD IAR
Sbjct: 392 LVHVLNESRRLSLEIYEKPQLDPDASYKIALGRSLGGLSSVQMQVAREIFNWRDAIAREV 451
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAA 134
D+S VL ++ IA +LPT+A + + + + ++ I+K+S+ + A
Sbjct: 452 DDSPPAVLRLSAVLAIATKLPTSANDVLKCCTPVSMVVRTNVTRLVQIVKDSVGDDA 508
>gi|120554530|ref|YP_958881.1| 3'-5' exonuclease [Marinobacter aquaeolei VT8]
gi|120324379|gb|ABM18694.1| 3'-5' exonuclease [Marinobacter aquaeolei VT8]
Length = 383
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 41 ENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTT 100
E YL + G G LN +Q AV+ L WR+ R D VL + LI IA++LP++
Sbjct: 211 EQHYLKLRG--GWTLNREQQAVLRALVAWREQECRRQDRPRNRVLNDGLLIAIAERLPSS 268
Query: 101 AAKLRRLLKSKHSYIERYMGPVLSIIKNS 129
AA +R + +++RY ++ +++ +
Sbjct: 269 AAVIRDVQGVPGGFVKRYGEQLVELVQAA 297
>gi|392296333|gb|EIW07435.1| Rrp6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 733
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V L +WRD++AR DDES +V+PN+ L + PT + L ++ +
Sbjct: 440 VLVRELYQWRDLVARRDDESPRFVMPNQLLAALVAYTPTDVIGVVSLTNGVTEHVRQNAK 499
Query: 121 PVLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEV--LVLDTSS 164
+ ++I+++++N N EE + S ET+ ++L+T S
Sbjct: 500 LLANLIRDALRNIKN-------TNEEATPIPSSETKADGILLETIS 538
>gi|156844457|ref|XP_001645291.1| hypothetical protein Kpol_1037p29 [Vanderwaltozyma polyspora DSM
70294]
gi|156115951|gb|EDO17433.1| hypothetical protein Kpol_1037p29 [Vanderwaltozyma polyspora DSM
70294]
Length = 746
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 43/76 (56%)
Query: 57 AQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIE 116
+ ++ ++ + EWRD+IAR DDES Y++PN+ +I + + P A + + ++
Sbjct: 435 STKIELLKRIWEWRDMIARRDDESPRYIMPNQLMISLVEYTPIDPAGVISVSNVMTDHVR 494
Query: 117 RYMGPVLSIIKNSMQN 132
+ ++IK S+++
Sbjct: 495 SNSKVIANLIKKSLED 510
>gi|322708171|gb|EFY99748.1| exosome complex exonuclease Rrp6, putative [Metarhizium anisopliae
ARSEF 23]
Length = 830
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 44 YLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAK 103
Y +++ LN +Q ++ L +WRD AR +DES +VL + EIA+ P
Sbjct: 437 YNYVFKHSHLALNGEQFSIFKALWKWRDETARQEDESPNFVLGPTNVTEIARVNPPDVKA 496
Query: 104 LRRLL 108
L LL
Sbjct: 497 LHSLL 501
>gi|169617554|ref|XP_001802191.1| hypothetical protein SNOG_11959 [Phaeosphaeria nodorum SN15]
gi|111059251|gb|EAT80371.1| hypothetical protein SNOG_11959 [Phaeosphaeria nodorum SN15]
Length = 805
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 16/119 (13%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLN-----------AQQLAVVAGLC 67
+ +V +S +V Q YE + Y GL AG + QQ +V +
Sbjct: 414 VQDVLIKSKEVALQRYEHPV-----YDAKLGLGSAGWHKLIMRTPVQFTPQQFSVFRAVH 468
Query: 68 EWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSII 126
+WRD ++R +DES +++PN + +A+ +P A L ++ I ++S+I
Sbjct: 469 QWRDSLSRKEDESPLFIMPNHAVFSVARAMPVDKAALFNAIQHVSHIIRGKADELVSVI 527
>gi|72387778|ref|XP_844313.1| ribosomal RNA processing protein 6 [Trypanosoma brucei TREU927]
gi|62359465|gb|AAX79902.1| ribosomal RNA processing protein 6 [Trypanosoma brucei]
gi|70800846|gb|AAZ10754.1| ribosomal RNA processing protein 6 [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 736
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSEN-SYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L V++ S + + YEK L + +Y G GL++ QL V + WRD+ AR
Sbjct: 425 LLHVFQESRLLSLERYEKPHLDPDVTYKQALGRSLGGLSSSQLQVAREIFNWRDMAAREA 484
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNA 133
D+S V+ ++ IA +LPT+A ++ + + + +L I+K+++ +A
Sbjct: 485 DDSPSAVMHISCVLSIATKLPTSANEVLKCCSPVSVAVRTNVMKLLQIVKDAIGSA 540
>gi|261327471|emb|CBH10446.1| ribosomal RNA processing protein 6, putative [Trypanosoma brucei
gambiense DAL972]
Length = 738
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSEN-SYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L V++ S + + YEK L + +Y G GL++ QL V + WRD+ AR
Sbjct: 425 LLHVFQESRLLSLERYEKPHLDPDVTYKQALGRSLGGLSSSQLQVAREIFNWRDMAAREA 484
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNA 133
D+S V+ ++ IA +LPT+A ++ + + + +L I+K+++ +A
Sbjct: 485 DDSPSAVMHISCVLSIATKLPTSANEVLKCCSPVSVAVRTNVMKLLQIVKDAIGSA 540
>gi|336369802|gb|EGN98143.1| hypothetical protein SERLA73DRAFT_91376 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382569|gb|EGO23719.1| hypothetical protein SERLADRAFT_450051 [Serpula lacrymans var.
lacrymans S7.9]
Length = 879
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGP 121
V + WRD ++R +DEST YVLPN L ++A+Q P+ L + I R
Sbjct: 494 VYRSVHAWRDRVSREEDESTRYVLPNHYLFQLAEQPPSDMPALLAFFQHVPPVIRRRAKE 553
Query: 122 VLSIIKNSM--QNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRESVDG 178
+L +++++ +N +I E+ E + + ++ D S + +G+ +V+
Sbjct: 554 LLDSVRDAVARYGGSNATLI------EKTESITISEDTVITDLPSPNIVDQIGKPAVEA 606
>gi|14250912|emb|CAC39261.1| Rrp6p homologue [Trypanosoma brucei]
Length = 703
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSEN-SYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L V++ S + + YEK L + +Y G GL++ QL V + WRD+ AR
Sbjct: 392 LLHVFQESRLLSLERYEKPHLDPDVTYKQALGRSLGGLSSPQLQVAREIFNWRDMAAREA 451
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNA 133
D+S V+ ++ IA +LPT+A ++ + + + +L I+K+++ +A
Sbjct: 452 DDSPSAVMHISCVLSIATKLPTSANEVLKCCSPVSVAVRTNVMKLLQIVKDAIGSA 507
>gi|225560671|gb|EEH08952.1| exosome complex exonuclease RRP6 [Ajellomyces capsulatus G186AR]
Length = 807
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIER 117
+Q AV + +WRD IAR++DE YVL ++L +IA +P L R + +
Sbjct: 453 EQFAVFRAVHQWRDKIARSEDEGVQYVLSKQSLFKIAHAMPLDPVSLLRTVSPVSPLVRA 512
Query: 118 YMGPVLSIIKNS 129
++ +IK +
Sbjct: 513 RASELVQVIKQA 524
>gi|325088958|gb|EGC42268.1| exosome complex exonuclease RRP6 [Ajellomyces capsulatus H88]
Length = 807
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIER 117
+Q AV + +WRD IAR++DE YVL ++L +IA +P L R + +
Sbjct: 453 EQFAVFRAVHQWRDKIARSEDEGVQYVLSKQSLFKIAHAMPLDPVSLLRTVSPVSPLVRA 512
Query: 118 YMGPVLSIIKNS 129
++ +IK +
Sbjct: 513 RASELVQVIKQA 524
>gi|333985394|ref|YP_004514604.1| ribonuclease D [Methylomonas methanica MC09]
gi|333809435|gb|AEG02105.1| ribonuclease D [Methylomonas methanica MC09]
Length = 385
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 37 ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQ 96
+L EN++L I G L +QL+++ L EWR+ A+ +++ ++ P+ L+E+AK
Sbjct: 193 QLSPENAWLKIRG--KNKLTGRQLSILQSLSEWREQTAQTENKPRNWLFPDDMLLELAKL 250
Query: 97 LPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQ 131
P T A L ++ + RY + +I + Q
Sbjct: 251 QPVTLADLGKIRNINERSVNRYGKTLCELIDVARQ 285
>gi|112491261|pdb|2HBJ|A Chain A, Structure Of The Yeast Nuclear Exosome Component, Rrp6p,
Reveals An Interplay Between The Active Site And The
Hrdc Domain
gi|112491264|pdb|2HBK|A Chain A, Structure Of The Yeast Nuclear Exosome Component, Rrp6p,
Reveals An Interplay Between The Active Site And The
Hrdc Domain; Protein In Complex With Mn
gi|112491267|pdb|2HBL|A Chain A, Structure Of The Yeast Nuclear Exosome Component, Rrp6p,
Reveals An Interplay Between The Active Site And The
Hrdc Domain; Protein In Complex With Mn, Zn, And Amp
gi|112491277|pdb|2HBM|A Chain A, Structure Of The Yeast Nuclear Exosome Component, Rrp6p,
Reveals An Interplay Between The Active Site And The
Hrdc Domain; Protein In Complex With Mn, Zn, And Ump
Length = 410
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMG 120
+V L +WRD+IAR DDES +V+PN+ L + PT + L ++ +
Sbjct: 314 VLVRELYQWRDLIARRDDESPRFVMPNQLLAALVAYTPTDVIGVVSLTNGVTEHVRQNAK 373
Query: 121 PVLSIIKNSMQNAAN 135
+ ++I+++++N N
Sbjct: 374 LLANLIRDALRNIKN 388
>gi|407404412|gb|EKF29876.1| hypothetical protein MOQ_006321 [Trypanosoma cruzi marinkellei]
Length = 713
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 19 LTEVYKRSYDVCRQLYEK-ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L V S + ++YEK +L + SY G GL++ QL V + WRD AR
Sbjct: 392 LVHVLNESRRLSLEIYEKPQLDPDASYKVALGRSLGGLSSMQLQVAREIFNWRDATAREV 451
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAA--- 134
D+S VL ++ IA +LPT+A + + + + ++ I+K+++ + A
Sbjct: 452 DDSPPAVLHLSAVLAIATKLPTSANDVLKCCTPVSMVVRTNVTRLVQIVKDAVGDDAIAK 511
Query: 135 --NFEVIAQ 141
+F+V A+
Sbjct: 512 NSDFDVKAE 520
>gi|390603116|gb|EIN12508.1| hypothetical protein PUNSTDRAFT_97267 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 870
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 12 SENSDTPLTEVYKRSYDVCRQLYEKELL---------SENSYLHIYGLQGAGLNAQQLAV 62
S+ + L EV RS + +E+EL ++ + + Q AV
Sbjct: 451 SDGATWLLREVLARSAQTTLRTFERELYDADNGTGPAGWDTLARKWNKSAGAMPPVQRAV 510
Query: 63 VAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
+ WRD +AR +DES YVLPN L +IA+ P
Sbjct: 511 YRAVHAWRDRVAREEDESARYVLPNHYLFQIAESPP 546
>gi|119491955|ref|XP_001263472.1| exosome component 3'-5' exonuclease [Neosartorya fischeri NRRL 181]
gi|119411632|gb|EAW21575.1| exosome complex exonuclease Rrp6, putative [Neosartorya fischeri
NRRL 181]
Length = 765
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH 112
A L+ +Q AV + +WRD +AR +DE V P L +IA+ +P L R L
Sbjct: 444 AVLSKEQFAVFKAVHQWRDEVAREEDEGVQCVFPKHILFKIAQVMPLDQGTLFRTL---- 499
Query: 113 SYIERYMGPVLSIIKNSMQNAANFEVIAQKLKEE 146
PV I K+ AA+ + QK K E
Sbjct: 500 -------SPVTPIAKD---RAADLLEVIQKAKIE 523
>gi|212528170|ref|XP_002144242.1| exosome component 3'-5' exonuclease [Talaromyces marneffei ATCC
18224]
gi|210073640|gb|EEA27727.1| exosome complex exonuclease Rrp6, putative [Talaromyces marneffei
ATCC 18224]
Length = 795
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 22 VYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG------------LNAQQLAVVAGLCEW 69
V +RS Q YE+ + + G QGAG L+ +Q AV + EW
Sbjct: 410 VLERSKTEALQRYERPVYD------MAGGQGAGGWHDLLSRNPALLSKEQFAVFRAVHEW 463
Query: 70 RDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNS 129
RD +AR +DE V P L ++A +P L + L ++ + +L++IK +
Sbjct: 464 RDRVAREEDEGLQCVFPRHMLFKVAIAMPVDKHTLFKTLSPVTLIVKYRINELLALIKKA 523
>gi|50306309|ref|XP_453127.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642261|emb|CAH00223.1| KLLA0D01309p [Kluyveromyces lactis]
Length = 744
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPT 99
++ L EWRD IAR DDES YV+PN+ L+ + PT
Sbjct: 441 LLRRLYEWRDTIARRDDESPRYVMPNQLLVSLVAGAPT 478
>gi|67537662|ref|XP_662605.1| hypothetical protein AN5001.2 [Aspergillus nidulans FGSC A4]
gi|40741889|gb|EAA61079.1| hypothetical protein AN5001.2 [Aspergillus nidulans FGSC A4]
gi|259482125|tpe|CBF76306.1| TPA: exosome complex exonuclease Rrp6, putative (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 1297
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH 112
A L+++Q AV+ + EWRD +AR +DE V P L +A+ +P L R + S
Sbjct: 449 AILSSEQFAVLKAVHEWRDRVAREEDEGVQCVFPKHILFRVAQAMPQDLGTLFRTM-SPM 507
Query: 113 SYIERYMGP-VLSIIKNSMQNAAN 135
+ I + P +L +IK + A
Sbjct: 508 TPIAKDRAPDLLQVIKTAKAEGAT 531
>gi|452004410|gb|EMD96866.1| hypothetical protein COCHEDRAFT_1085740 [Cochliobolus
heterostrophus C5]
Length = 792
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 13/142 (9%)
Query: 19 LTEVYKRSYDVCRQLYEKEL------LSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDV 72
+ +V ++S + Q YE + L + + + +Q AV + WRD
Sbjct: 397 VQDVLEKSKETSLQRYEHPIYDSETGLGSSGWYKLISRTPVQFTPEQFAVFRAVHRWRDD 456
Query: 73 IARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSK----HSYIERYMGPVLSIIKN 128
+ R +DES +++PN + +A+ +P A L ++ S+ E +G V+ K
Sbjct: 457 LGRKEDESPLFIMPNHAVFSVARAMPADKAALFNAIQHVSHIIRSHAEELVGVVVEAKKE 516
Query: 129 SMQN---AANFEVIAQKLKEER 147
+ + I LK ER
Sbjct: 517 GLHGPELHTTLQTIEDMLKAER 538
>gi|330926290|ref|XP_003301407.1| hypothetical protein PTT_12892 [Pyrenophora teres f. teres 0-1]
gi|311323973|gb|EFQ90519.1| hypothetical protein PTT_12892 [Pyrenophora teres f. teres 0-1]
Length = 796
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 54/116 (46%), Gaps = 9/116 (7%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH 112
A +Q +V + EWRD + R +DES +++PN + +A+ +P+ L ++
Sbjct: 437 AQFTREQFSVFRAVHEWRDTLGRKEDESPLFIMPNHAVFSVARDMPSNKVGLFNAIQHVG 496
Query: 113 SYIERYMGPVLSIIKNSMQNAAN-------FEVIAQKLKEERM--EVASEETEVLV 159
+ ++ ++ + + A+ + IA + ER+ E A + EV+V
Sbjct: 497 HITRAHADELVGVVVEAKERGASGPELHEVLQAIADMQRAERVESETAPKTAEVVV 552
>gi|257784443|ref|YP_003179660.1| ribonuclease D [Atopobium parvulum DSM 20469]
gi|257472950|gb|ACV51069.1| ribonuclease D [Atopobium parvulum DSM 20469]
Length = 379
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
L +QLA+ +C WR+ IA D +VL + +IEI +++PTT+ +LR++
Sbjct: 209 LTRRQLAIAREVCAWREEIAAKRDVPRKWVLSDELIIEICRRVPTTSDRLRKI 261
>gi|227503491|ref|ZP_03933540.1| ribonuclease D [Corynebacterium accolens ATCC 49725]
gi|227075994|gb|EEI13957.1| ribonuclease D [Corynebacterium accolens ATCC 49725]
Length = 406
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 56 NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
N +Q A L RD I+R D + G VLPN+ L+EIA+ LP+T +L R+
Sbjct: 222 NGKQRAAAQSLWALRDDISRRTDTAPGRVLPNKVLVEIARVLPSTQPQLTRI 273
>gi|308234516|ref|ZP_07665253.1| ribonuclease D [Atopobium vaginae DSM 15829]
gi|328944110|ref|ZP_08241575.1| ribonuclease D [Atopobium vaginae DSM 15829]
gi|327492079|gb|EGF23853.1| ribonuclease D [Atopobium vaginae DSM 15829]
Length = 376
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 41 ENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTT 100
+ +YLH+ + + L +QLA+ + WRDVIA D +V+P+ +I++ K +P T
Sbjct: 194 QEAYLHMRRI--SSLTRKQLAIAREIGIWRDVIASHKDIPRKWVIPDEIVIDLCKSVPKT 251
Query: 101 AAKLRRL 107
+L R+
Sbjct: 252 MERLERI 258
>gi|451855365|gb|EMD68657.1| hypothetical protein COCSADRAFT_157073 [Cochliobolus sativus
ND90Pr]
Length = 791
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 16/150 (10%)
Query: 21 EVYKRSYDVCRQLYEKEL------LSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIA 74
+V ++S + Q YE + L + + + +Q AV + WRD +
Sbjct: 399 DVLEKSKETSLQRYEHPIYDSETGLGSSGWYKLISRTPVQFTPEQFAVFRAVHRWRDDLG 458
Query: 75 RADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSK----HSYIERYMGPVLSIIKNSM 130
R +DES +++PN + +A+ +P A L ++ S+ E +G V+ K +
Sbjct: 459 RKEDESPLFIMPNHAVFSVARAMPADKAALFNAIQHVSHIIRSHAEELVGVVVEAKKEGL 518
Query: 131 QN---AANFEVIAQKLKEERMEVASEETEV 157
+ I LK ER A ET V
Sbjct: 519 HGPELHTTLQTIEDMLKAER---AGPETAV 545
>gi|240280781|gb|EER44285.1| exosome complex exonuclease RRP6 [Ajellomyces capsulatus H143]
Length = 671
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIER 117
+Q AV + +WRD IAR++DE YVL ++L +IA +P L R + +
Sbjct: 453 EQFAVFRAVHQWRDKIARSEDEGVQYVLSKQSLFKIAHAMPLDPVSLLRTVSPVSPLVRA 512
Query: 118 YMGPVLSIIKNS 129
++ +IK +
Sbjct: 513 RASELVQVIKQA 524
>gi|154278361|ref|XP_001539994.1| exosome component 3'-5' exonuclease [Ajellomyces capsulatus NAm1]
gi|150413579|gb|EDN08962.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 807
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 36 KELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAK 95
+++L NS L + +Q AV + +WRD IAR +DE YVL ++L +IA
Sbjct: 440 RDMLVRNSTL---------FSREQFAVFRAVHQWRDKIARFEDEGVQYVLSKQSLFKIAH 490
Query: 96 QLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNS 129
+P L R + + ++ +IK +
Sbjct: 491 AMPLDPVSLLRTVSPVSPLVRARASELVQVIKKA 524
>gi|306836261|ref|ZP_07469243.1| ribonuclease D [Corynebacterium accolens ATCC 49726]
gi|304567853|gb|EFM43436.1| ribonuclease D [Corynebacterium accolens ATCC 49726]
Length = 406
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 56 NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
N Q A L RD I+R D + G VLPN+ L+EIA+ LP+T +L R+
Sbjct: 222 NGNQRAAAQSLWNLRDDISRRTDTAPGRVLPNKVLVEIARVLPSTQPQLTRI 273
>gi|70999828|ref|XP_754631.1| exosome complex exonuclease Rrp6 [Aspergillus fumigatus Af293]
gi|66852268|gb|EAL92593.1| exosome complex exonuclease Rrp6, putative [Aspergillus fumigatus
Af293]
Length = 764
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH 112
A L+ +Q AV + +WRD +AR +DE V P L +IA+ +P L R L
Sbjct: 444 AVLSKEQFAVFKAVHQWRDEVAREEDEGVQCVFPKHILFKIAQVMPLDQGTLFRTLSPVT 503
Query: 113 SYIERYMGPVLSIIKNS 129
+ +L +IK +
Sbjct: 504 PIAKDRAADLLEVIKKA 520
>gi|159127645|gb|EDP52760.1| exosome complex exonuclease Rrp6, putative [Aspergillus fumigatus
A1163]
Length = 764
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH 112
A L+ +Q AV + +WRD +AR +DE V P L +IA+ +P L R L
Sbjct: 444 AVLSKEQFAVFKAVHQWRDEVAREEDEGVQCVFPKHILFKIAQVMPLDQGTLFRTLSPVT 503
Query: 113 SYIERYMGPVLSIIKNS 129
+ +L +IK +
Sbjct: 504 PIAKDRAADLLEVIKKA 520
>gi|189194651|ref|XP_001933664.1| exosome complex exonuclease Rrp [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979228|gb|EDU45854.1| exosome complex exonuclease Rrp [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 786
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
QQ +V + EWRD + R +DES +++PN + +A+ +P+ L
Sbjct: 432 QQFSVFRAVHEWRDTLGRKEDESPLFIMPNHAVFSVARDMPSNKVGL 478
>gi|389740502|gb|EIM81693.1| hypothetical protein STEHIDRAFT_171972 [Stereum hirsutum FP-91666
SS1]
Length = 910
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 21 EVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG------LNAQQLAVVA---------- 64
EV RS + ++YE+E Y + G G G ++A+VA
Sbjct: 454 EVLSRSAETSLRVYERE------YYDVEGGSGPGGWDTMAKKWNKVALVADGPGGVQREV 507
Query: 65 --GLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPV 122
+ WRD AR +DES YVL N + ++A++ P A L + S I R +
Sbjct: 508 YRAVHAWRDRTAREEDESVRYVLANHFVFQLAERPPNDMAALLHMFHSVPPVIRRRAKEL 567
Query: 123 LSIIKNSMQ 131
L I+ +++
Sbjct: 568 LDCIRVALK 576
>gi|354544046|emb|CCE40768.1| hypothetical protein CPAR2_108030 [Candida parapsilosis]
Length = 771
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIA 94
VV L +WRD+IAR +DES Y++PN+ L+ +A
Sbjct: 461 VVEQLYKWRDLIARKEDESVRYIMPNQLLVSLA 493
>gi|340053178|emb|CCC47466.1| putative ribosomal RNA processing protein 6 [Trypanosoma vivax
Y486]
Length = 709
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSEN-SYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L V++ S + + YEK +L + +Y G GL+ QL V + WRD AR
Sbjct: 389 LLHVFQESRLLSLERYEKPVLEPDVTYKVALGRSLGGLSKAQLQVAQEIFNWRDGAAREA 448
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNA 133
D+S V+ +++ IA +LP++A + R + + +L I+K+++ A
Sbjct: 449 DDSPSAVMHLSSVLSIATRLPSSANDVLRCCSPVSVIVRTNVMKLLQIVKDAVGGA 504
>gi|321465482|gb|EFX76483.1| hypothetical protein DAPPUDRAFT_226045 [Daphnia pulex]
Length = 544
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIY---GLQGAGLNAQQLAVVAGLCEWRDVIAR 75
+ +V+ S VC + Y + L E Y Y +G N QQ + + WRD +AR
Sbjct: 310 VLQVWNNSRSVCLKQYRIQTLEE-MYSKFYSSLNKEGKKFNNQQSYALQEIFSWRDRVAR 368
Query: 76 ADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSII 126
DES YV+ ++ I QL + + + S+H ++ +++ + +I
Sbjct: 369 ELDESPHYVMTKFNMLNIISQLHNQPENILQPI-SRHRFVHQHLPQLHEVI 418
>gi|254579989|ref|XP_002495980.1| ZYRO0C07678p [Zygosaccharomyces rouxii]
gi|238938871|emb|CAR27047.1| ZYRO0C07678p [Zygosaccharomyces rouxii]
Length = 741
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
+V L EWRD IAR DDES YV+PN+ L + P
Sbjct: 440 LVKNLYEWRDTIARRDDESPRYVMPNQLLAYLVDYTP 476
>gi|242767043|ref|XP_002341292.1| exosome component 3'-5' exonuclease [Talaromyces stipitatus ATCC
10500]
gi|218724488|gb|EED23905.1| exosome complex exonuclease Rrp6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 771
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 37 ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQ 96
+LLS NS +Q AV + EWRD +AR +DE V P L +A
Sbjct: 440 DLLSRNS---------GQFTKEQFAVFKAVHEWRDRVAREEDEGLQCVFPRHVLFRVAVA 490
Query: 97 LPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNS 129
+P L + L ++ + +L IIK +
Sbjct: 491 MPVDKHTLFKTLSPVTLIVKDRVTELLDIIKKA 523
>gi|409040136|gb|EKM49624.1| hypothetical protein PHACADRAFT_214164 [Phanerochaete carnosa
HHB-10118-sp]
Length = 431
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGP 121
+ + WRD AR +DEST YVLPN L +A+Q P A L L + + R
Sbjct: 110 IYKAVHAWRDRAAREEDESTRYVLPNHYLFVLAEQPPADIAGLLSLFQHVPPVVRRRAKE 169
Query: 122 VLSIIKNS 129
+ I+ +
Sbjct: 170 LFEAIRQA 177
>gi|405119146|gb|AFR93919.1| PM-scl autoantigen [Cryptococcus neoformans var. grubii H99]
Length = 954
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG--------LNAQQLAVVAGLCEWR 70
+ EV +RS D ++YE++ + G AG + + V L +WR
Sbjct: 445 MREVLERSADTALKMYERDSYDIETGRGSGGWLAAGKKWLPKGEIEQESGWVWRHLHDWR 504
Query: 71 DVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYI-ERYMGPVLSII 126
D +AR DES YV+PN L +++ A L R+++ + I +Y+ + SII
Sbjct: 505 DRVAREMDESPFYVMPNNMLRDVSTA--DNTANLSRIIRRDRAPIAAQYIPEITSII 559
>gi|300121240|emb|CBK21621.2| unnamed protein product [Blastocystis hominis]
Length = 500
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 59 QLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERY 118
Q + L WRDV+AR DES YVLP L+++A +P T +LRRLL + E+
Sbjct: 420 QKMLFLSLYYWRDVVARELDESVQYVLPLLPLLKVAHAVPKTKEELRRLLSPLSATAEQR 479
Query: 119 MGPVLSIIKNS 129
+ + SI+++
Sbjct: 480 LDRLFSIVESC 490
>gi|363750290|ref|XP_003645362.1| hypothetical protein Ecym_3030 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888996|gb|AET38545.1| Hypothetical protein Ecym_3030 [Eremothecium cymbalariae
DBVPG#7215]
Length = 747
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 66 LCEWRDVIARADDESTGYVLPNRTLIEIAKQLPT 99
L +WRD++AR DDES YV+PN+ L+ + P+
Sbjct: 447 LYKWRDMVARKDDESVRYVMPNQLLVSLVTLAPS 480
>gi|90020985|ref|YP_526812.1| ribonuclease D [Saccharophagus degradans 2-40]
gi|89950585|gb|ABD80600.1| ribonuclease D [Saccharophagus degradans 2-40]
Length = 386
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 43 SYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAA 102
SYL + LNA+QLA+ LCEWR++ A+ D+ ++ TL +A + P +
Sbjct: 206 SYLRVKN--AWKLNAKQLAIFQNLCEWRELTAQKRDKPRNRIVKENTLFAMALKRPKHIS 263
Query: 103 KLR-------RLLKSKHSYIERYM 119
+LR R++++ Y+ R +
Sbjct: 264 QLRNYEGMSDRVIRTDGEYLLRLI 287
>gi|115396098|ref|XP_001213688.1| exosome component 3'-5' exonuclease [Aspergillus terreus NIH2624]
gi|114193257|gb|EAU34957.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 761
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
++ +Q AV + +WRD +AR +DE V P L +A+ +P L R L +
Sbjct: 446 VSKEQFAVFKAVHQWRDQVAREEDEGVQCVFPKHVLFRVAQVMPLDLGTLFRTLSPVTTI 505
Query: 115 IERYMGPVLSIIK 127
+ +L +IK
Sbjct: 506 AKERASELLEVIK 518
>gi|345564419|gb|EGX47382.1| hypothetical protein AOL_s00083g475 [Arthrobotrys oligospora ATCC
24927]
Length = 806
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 8/128 (6%)
Query: 22 VYKRSYDVCRQLYEKELL------SENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIAR 75
V S + C + Y+ E +L I +Q +V + WRD +AR
Sbjct: 410 VQNNSKETCLKTYDTEPYDPVNGGGSRGWLSILKHNAVNFTDEQFSVFRAVHAWRDRVAR 469
Query: 76 ADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNAAN 135
+D++ +V+ L+ A+Q+P AA L S + + + ++S IK + N
Sbjct: 470 EEDDNPHFVMSKNHLLSFARQMPVDAAA--ALSVSSNPLLRSKLSDLVSTIKEAKANPVP 527
Query: 136 FEVIAQKL 143
F + L
Sbjct: 528 FSSVQHLL 535
>gi|50286743|ref|XP_445801.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525107|emb|CAG58720.1| unnamed protein product [Candida glabrata]
Length = 737
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPT 99
++ L EWRD++AR DDES YV+PN+ L+ + P
Sbjct: 441 LIRELYEWRDMMARRDDESPRYVMPNQLLVSLVAYGPV 478
>gi|425768291|gb|EKV06818.1| Exosome complex exonuclease Rrp6, putative [Penicillium digitatum
Pd1]
gi|425770373|gb|EKV08846.1| Exosome complex exonuclease Rrp6, putative [Penicillium digitatum
PHI26]
Length = 754
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
L +Q AV + +WRD +ARA+DE V P L ++A +P L R L
Sbjct: 443 LPKEQFAVFKAVHQWRDEVARAEDEGWQCVFPKHMLFKLATIMPLDMGSLFRTLSPMTPI 502
Query: 115 IERYMGPVLSIIKNS 129
+ +L +IK +
Sbjct: 503 AKERSHDLLEVIKQA 517
>gi|365758455|gb|EHN00296.1| Rrp6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 734
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGP 121
+V L WRD IAR DDES +V+PN+ L + P + L ++ +
Sbjct: 441 LVKDLYLWRDFIARRDDESPRFVMPNQLLAALVAYAPIDVIGVVSLTNGVTEHVRQNAKV 500
Query: 122 VLSIIKNSMQNA 133
+ ++I+N+++N
Sbjct: 501 LANLIENALRNV 512
>gi|298705107|emb|CBJ34135.1| expressed unknown protein [Ectocarpus siliculosus]
Length = 243
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 69 WRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
WRD AR D+ YV P TLIE+A +PTT LRR+
Sbjct: 59 WRDRTARRLDDGVAYVCPGDTLIEVALAMPTTVDGLRRV 97
>gi|226355040|ref|YP_002784780.1| Nucleic acid-binding protein, HRDC family [Deinococcus deserti
VCD115]
gi|226317030|gb|ACO45026.1| putative Nucleic acid-binding protein, HRDC family [Deinococcus
deserti VCD115]
Length = 591
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH 112
A L +Q AV A L EWR+ A+ + S + N TL EIA+++P T A LR +
Sbjct: 516 ADLTDEQAAVYARLREWRNAEAKRQEISRFIIASNATLAEIARRIPYTEADLRAVKGMGP 575
Query: 113 SYIERYMGPVLSIIKN 128
+ +Y +L +++
Sbjct: 576 ERVRKYGEKILEVVRG 591
>gi|119505873|ref|ZP_01627938.1| ribonuclease D [marine gamma proteobacterium HTCC2080]
gi|119458301|gb|EAW39411.1| ribonuclease D [marine gamma proteobacterium HTCC2080]
Length = 380
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 35/50 (70%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
LN+QQLAV+ L +WR+ AR + ++L ++ ++++AK++PT+ +L
Sbjct: 209 LNSQQLAVLLDLIDWRESKARDRNRPRNWILHDKVILDLAKRIPTSMPQL 258
>gi|164655640|ref|XP_001728949.1| hypothetical protein MGL_3943 [Malassezia globosa CBS 7966]
gi|159102837|gb|EDP41735.1| hypothetical protein MGL_3943 [Malassezia globosa CBS 7966]
Length = 849
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 17/97 (17%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENS-----YLHIYGLQGAGL-NAQQLA----------- 61
+ EV+ RS ++Y KE E + ++ G L A Q A
Sbjct: 427 VKEVFDRSKPTASKVYAKEPWDERGNSRGGWKSLWIRMGGDLARASQDAPPDAPLGREER 486
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
+V L WRD +AR +DES +V+P R LI++A + P
Sbjct: 487 IVRRLHHWRDQVARKEDESPAFVMPPRVLIQLALRPP 523
>gi|269956679|ref|YP_003326468.1| 3'-5' exonuclease [Xylanimonas cellulosilytica DSM 15894]
gi|269305360|gb|ACZ30910.1| 3'-5' exonuclease [Xylanimonas cellulosilytica DSM 15894]
Length = 420
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
++LAVV L E RD ARA D + G VLP+R ++ A LP TA +L
Sbjct: 243 RKLAVVRALWEARDASARARDVAPGRVLPDRAIVAAANALPRTAGQL 289
>gi|359780230|ref|ZP_09283456.1| ribonuclease D [Pseudomonas psychrotolerans L19]
gi|359371542|gb|EHK72107.1| ribonuclease D [Pseudomonas psychrotolerans L19]
Length = 384
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
L+ QQLAV+ LC WR+V AR D+ +VL R+L +A+ PT L R+
Sbjct: 210 LSRQQLAVLRVLCHWREVQARERDQPRNHVLRERSLWPLARFQPTDKQALARI 262
>gi|429218811|ref|YP_007180455.1| cystathionine beta-lyase/cystathionine gamma-synthase [Deinococcus
peraridilitoris DSM 19664]
gi|429129674|gb|AFZ66689.1| cystathionine beta-lyase/cystathionine gamma-synthase [Deinococcus
peraridilitoris DSM 19664]
Length = 403
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH 112
AGL+ +QLA L EWR+ AR + S V N TL EIA+ P A+LR++
Sbjct: 325 AGLSEEQLAAFERLREWRNAEARRQEVSRFIVASNATLAEIARHAPQNEAELRQVKGMGP 384
Query: 113 SYIERYMGPVLSIIKN 128
+ +Y +L++ +
Sbjct: 385 ERVRKYAERILNMTRG 400
>gi|388857402|emb|CCF49076.1| related to RRP6-Exonuclease component of the nuclear exosome
[Ustilago hordei]
Length = 1006
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 19 LTEVYKRSYDVCRQLYEKELL-----SENSYLHIYGLQG--AGLNAQ---QLA------- 61
+ EV+ RS DV Y KE + + ++ G A L + +L+
Sbjct: 526 IREVFNRSKDVAMSTYAKEEWDSQGETREGWRSVWRKWGGEAALGTEDRRELSQMKKEER 585
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGP 121
+V L +WRD +AR +DES Y+L L+ +A + P + + S +++ +G
Sbjct: 586 LVRALHKWRDGVAREEDESPRYILGANNLMMLAARAPVKPEGVLACVPPNASGLKKRIGE 645
Query: 122 VLSIIKNSMQNAANFEVIAQKLKEERME 149
+ +IK+ ++ +E +KL EE+ +
Sbjct: 646 LAKLIKDEVE---AWEKHQEKLSEEKRQ 670
>gi|331005546|ref|ZP_08328920.1| Ribonuclease D [gamma proteobacterium IMCC1989]
gi|330420648|gb|EGG94940.1| Ribonuclease D [gamma proteobacterium IMCC1989]
Length = 383
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 30 CRQLYEKELLSENSYLHIYGLQ---GAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLP 86
C+++ EK L S+ + Y + L+A+QL V+A +C WR+ A+ +D +L
Sbjct: 198 CQRMIEK--LRNTSHENTYYTRVKSAWKLDAEQLTVLAAICRWREGQAKKNDVPRSRILK 255
Query: 87 NRTLIEIAKQLPTTAAKLRRL 107
+ +L +IA +LP +L+R+
Sbjct: 256 DVSLFDIALKLPMDMQQLKRI 276
>gi|350552229|ref|ZP_08921434.1| ribonuclease D [Thiorhodospira sibirica ATCC 700588]
gi|349794882|gb|EGZ48690.1| ribonuclease D [Thiorhodospira sibirica ATCC 700588]
Length = 391
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
L QLAV+A L WR+ A + +++ + L+++A+Q P TA KL R+
Sbjct: 210 LRGPQLAVLASLASWRESEAMRANRPRRWIIADDPLLDMARQQPNTAEKLARIRGVNEGS 269
Query: 115 IERYMGPVLSIIKNSMQ 131
+ RY G +L+ I Q
Sbjct: 270 LRRYEGALLNAIAQGKQ 286
>gi|256395899|ref|YP_003117463.1| 3'-5' exonuclease [Catenulispora acidiphila DSM 44928]
gi|256362125|gb|ACU75622.1| 3'-5' exonuclease [Catenulispora acidiphila DSM 44928]
Length = 443
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
+QLAVV L E RD +AR D + VLP++ +I+ A LP TAA++R +
Sbjct: 255 RQLAVVRALWESRDELARRRDMTPTRVLPDQAIIDSALSLPGTAAQMRTI 304
>gi|150951537|ref|XP_001387875.2| exosome component 3'-5' exonuclease [Scheffersomyces stipitis CBS
6054]
gi|149388676|gb|EAZ63852.2| ribosomal RNA processing 3'-5' exonuclease [Scheffersomyces
stipitis CBS 6054]
Length = 792
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 61 AVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAK-QLPTTAAKL 104
+VV L WRD IA+ +DES +V+PN+ L+ +A P AK+
Sbjct: 467 SVVEALYNWRDRIAKIEDESVRFVMPNQLLVNLANLNQPVDVAKV 511
>gi|401837803|gb|EJT41675.1| RRP6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 734
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGP 121
+V L WRD IAR DDES +V+PN+ L + P + L ++ +
Sbjct: 441 LVKDLYLWRDFIARRDDESPRFVMPNQLLAALVAYAPIDVIGVVSLTNGVTEHVRQNAKV 500
Query: 122 VLSIIKNSMQN 132
+ ++I+N++ N
Sbjct: 501 LANLIENALGN 511
>gi|342180559|emb|CCC90035.1| putative ribosomal RNA processing protein 6 [Trypanosoma congolense
IL3000]
Length = 745
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 19 LTEVYKRSYDVCRQLYEK-ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L V++ S + + YEK +L + +Y G GL+ QL V + WRD AR
Sbjct: 422 LVHVFQESRALSLERYEKPQLDPDATYKLALGRSLGGLSLSQLQVAREIFNWRDAAAREA 481
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKN 128
D+S V+ ++ IA +LP +A ++ + + + +L I+K+
Sbjct: 482 DDSPSAVMHISCVLSIATRLPLSANEVLKCCSPVSVIVRTNVMKLLQIVKS 532
>gi|302335597|ref|YP_003800804.1| ribonuclease D [Olsenella uli DSM 7084]
gi|301319437|gb|ADK67924.1| ribonuclease D [Olsenella uli DSM 7084]
Length = 376
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 41 ENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTT 100
E +YLH+ + L +QLA+ +C WR+ A D +V+ + ++E K+ P T
Sbjct: 194 EEAYLHLR--RSGSLTRRQLAIAREVCAWRESAAARRDVPRKWVVSDELIVEACKRAPRT 251
Query: 101 AAKLRRL 107
+LRR+
Sbjct: 252 LDRLRRI 258
>gi|227504960|ref|ZP_03935009.1| ribonuclease D [Corynebacterium striatum ATCC 6940]
gi|227198469|gb|EEI78517.1| ribonuclease D [Corynebacterium striatum ATCC 6940]
Length = 414
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 40 SENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPT 99
+E ++ + GL +QLAV L R+ IAR+ D + VLP+R LI+IA+ LP
Sbjct: 207 TERTWRGLKGLSSLR-TGEQLAVAKALWTRRESIARSTDTAPNRVLPHRVLIDIARTLPD 265
Query: 100 TAAKLRRL 107
+ + R+
Sbjct: 266 SPQQFARI 273
>gi|395236978|ref|ZP_10415104.1| ribonuclease D [Turicella otitidis ATCC 51513]
gi|423350078|ref|ZP_17327731.1| ribonuclease D [Turicella otitidis ATCC 51513]
gi|394487826|emb|CCI83192.1| ribonuclease D [Turicella otitidis ATCC 51513]
gi|404387940|gb|EJZ83031.1| ribonuclease D [Turicella otitidis ATCC 51513]
Length = 399
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRR--LLKSKHSYI 115
+QLAV GL EWR+ AR +D S V+ +R L+ +A+ P + A++RR + S+ +
Sbjct: 223 RQLAVARGLFEWREDRARKEDLSPHLVMRDRALLALAENPPRSPAEVRRAPYMGSRQRGL 282
Query: 116 ER 117
ER
Sbjct: 283 ER 284
>gi|84496254|ref|ZP_00995108.1| putative ribonuclease D [Janibacter sp. HTCC2649]
gi|84383022|gb|EAP98903.1| putative ribonuclease D [Janibacter sp. HTCC2649]
Length = 428
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 30 CRQLYEKELLSENSYLHIYGLQGAGLNA----QQLAVVAGLCEWRDVIARADDESTGYVL 85
RQ +E L E + + +GLN + +AVV L RD IAR D S G +L
Sbjct: 219 ARQEFEALLTWEPTERVDPWRRTSGLNTIRSRRGVAVVRELWYARDDIARDRDTSPGRIL 278
Query: 86 PNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNS 129
P+ LI IA + PT+ A L S H I RY ++ +K +
Sbjct: 279 PDAGLISIATEAPTSPAD----LPSGHRAISRYGRQWVAAVKRA 318
>gi|344304844|gb|EGW35076.1| hypothetical protein SPAPADRAFT_53425 [Spathaspora passalidarum
NRRL Y-27907]
Length = 756
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIA 94
VV L WRD++A+ +DES Y++PN+ L+ +A
Sbjct: 457 VVEVLYNWRDLVAKQEDESVRYIMPNQLLVTLA 489
>gi|339058452|ref|ZP_08648896.1| Ribonuclease D [gamma proteobacterium IMCC2047]
gi|330720339|gb|EGG98679.1| Ribonuclease D [gamma proteobacterium IMCC2047]
Length = 219
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 43 SYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAA 102
+YL + G L Q+ ++ L EWR++ AR + G++L + L++IA++LP T
Sbjct: 44 AYLKVKG--ANKLTEDQVQIIQRLAEWREIQARQRNIPRGFILKDPQLLDIAQRLPDTTQ 101
Query: 103 KLRR 106
L R
Sbjct: 102 SLGR 105
>gi|344943543|ref|ZP_08782830.1| ribonuclease D [Methylobacter tundripaludum SV96]
gi|344260830|gb|EGW21102.1| ribonuclease D [Methylobacter tundripaludum SV96]
Length = 389
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 33 LYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIE 92
LYE + E ++L I G L +QL++V L EWR+ A+ +D ++L + L +
Sbjct: 193 LYEVK--PEKAWLKIKG--KNKLTGRQLSIVQALAEWREKAAQTEDRPKSWLLRDEMLFD 248
Query: 93 IAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSII 126
+AK P T ++L + + RY + +I
Sbjct: 249 LAKLQPETVSELANVRAINERTVNRYGAELCQLI 282
>gi|406894045|gb|EKD38950.1| hypothetical protein ACD_75C00553G0006 [uncultured bacterium]
Length = 378
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 40 SENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPT 99
++ YL I + L+ LA++ L WRD +A+ D G+++ + L+EIA++ P
Sbjct: 200 ADERYLRIRNI--GTLDRPGLAILMNLTTWRDGMAKKHDRPRGHIIKDTILLEIARKKPR 257
Query: 100 TAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQ 131
T +L+ + + + +Y +++II +++
Sbjct: 258 TLLELKNGSEISDNAMNKYGQNIVAIIDTTLK 289
>gi|403714102|ref|ZP_10940065.1| ribonuclease D [Kineosphaera limosa NBRC 100340]
gi|403211772|dbj|GAB94748.1| ribonuclease D [Kineosphaera limosa NBRC 100340]
Length = 434
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIER 117
+ + +V L RD IAR D + G VLP+ L+++A+ P T+A L + S+H + R
Sbjct: 259 RNVGIVRDLWLARDQIARTRDIAAGRVLPDAVLLQLAQATPRTSADLPSI--SRHKAVGR 316
Query: 118 YMGPVLSIIKNSMQN 132
Y L+ I+ ++
Sbjct: 317 YGETWLNAIRTGLER 331
>gi|357404370|ref|YP_004916294.1| ribonuclease D [Methylomicrobium alcaliphilum 20Z]
gi|351717035|emb|CCE22700.1| Ribonuclease D [Methylomicrobium alcaliphilum 20Z]
Length = 386
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 37 ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQ 96
E+ +N++L I G L +QL++V L EWR+ A+ +D ++L + + E+AKQ
Sbjct: 194 EISPKNAWLKIRG--KNKLTGKQLSIVQTLAEWREQTAQKEDRPRNWLLRDDMMFELAKQ 251
Query: 97 LPTTAAKLRRL------LKSKHSYI 115
P T ++ ++ + SKH I
Sbjct: 252 QPGTVEEMLKVHNINERMVSKHGKI 276
>gi|221485391|gb|EEE23672.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii GT1]
Length = 1353
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 22 VYKRSYDVCRQLY-EKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDES 80
+RS DVC +L+ E + + AGL+ V L +WRD +AR D S
Sbjct: 666 TMERSRDVCLKLHVEAPFDAPAEAEALLKRTRAGLSPLSYVVFIELLKWRDTLARRLDRS 725
Query: 81 TGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNA 133
+ L+ +A++ PT+A + ++ + ++M ++ +I+ S+ ++
Sbjct: 726 PVSLATPAHLLLLAQKRPTSAVEFAAAMRPAPPTLRQHMPELIQLIQRSLSDS 778
>gi|237835553|ref|XP_002367074.1| exosome component 10, putative [Toxoplasma gondii ME49]
gi|211964738|gb|EEA99933.1| exosome component 10, putative [Toxoplasma gondii ME49]
Length = 1353
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 22 VYKRSYDVCRQLY-EKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDES 80
+RS DVC +L+ E + + AGL+ V L +WRD +AR D S
Sbjct: 666 TMERSRDVCLKLHVEAPFDAPAEAEALLKRTRAGLSPLSYVVFIELLKWRDTLARRLDRS 725
Query: 81 TGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNA 133
+ L+ +A++ PT+A + ++ + ++M ++ +I+ S+ ++
Sbjct: 726 PVSLATPAHLLLLAQKRPTSAVEFAAAMRPAPPTLRQHMPELIQLIQRSLSDS 778
>gi|145548742|ref|XP_001460051.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427879|emb|CAK92654.1| unnamed protein product [Paramecium tetraurelia]
Length = 676
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 1 MKIKLSSMPKESEN-SDTP---LTEVYKRSYDVCRQLYEKELLSENSYLH-IYGLQGAGL 55
M+ L + K ++N S+ P L V KRS + ++Y+K L ++ L I Q +
Sbjct: 362 MRQDLKKLNKPNDNISNIPNYYLEAVLKRSKETALKIYKKPLQDQDQSLQTILNKQDRRM 421
Query: 56 NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLL---KSKH 112
A+ ++ L E R+ + D++ Y LPN L +I + PTT +L+ L K+ H
Sbjct: 422 EAKSFELMVRLLELREELGIKHDQNPRYFLPNPFLFKIVESKPTTIQELKSQLGGDKNIH 481
Query: 113 SYIERYMGPVLSII 126
++ + L ++
Sbjct: 482 EVVKDNLWQFLKVL 495
>gi|221506253|gb|EEE31888.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii VEG]
Length = 1353
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 22 VYKRSYDVCRQLY-EKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDES 80
+RS DVC +L+ E + + AGL+ V L +WRD +AR D S
Sbjct: 666 TMERSRDVCLKLHVEAPFDAPAEAEALLKRTRAGLSPLSYVVFIELLKWRDTLARRLDRS 725
Query: 81 TGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNSMQNA 133
+ L+ +A++ PT+A + ++ + ++M ++ +I+ S+ ++
Sbjct: 726 PVSLATPAHLLLLAQKRPTSAVEFAAAMRPAPPTLRQHMPELIQLIQRSLSDS 778
>gi|197105155|ref|YP_002130532.1| ribonuclease D [Phenylobacterium zucineum HLK1]
gi|196478575|gb|ACG78103.1| ribonuclease D [Phenylobacterium zucineum HLK1]
Length = 392
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 56 NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYI 115
A+ LAV + WR+ A+ D+ G +L + + EIA Q PT A L RL +
Sbjct: 207 TAKYLAVYRAVAAWRERTAQLRDQPRGRILKDDAIDEIATQTPTDADALDRLRSVPKGFS 266
Query: 116 ERYMGP-VLSIIKNSMQNAANFEVIAQKLKEERMEVASEETEVL 158
GP +L+ ++ ++++ + + +K ++ A E+L
Sbjct: 267 GSRFGPDLLAAVREALKDPEGYAPVIEKTRQPASPAAGAVVELL 310
>gi|94984130|ref|YP_603494.1| hypothetical protein Dgeo_0021 [Deinococcus geothermalis DSM 11300]
gi|94554411|gb|ABF44325.1| Cys/Met metabolism PLP-dependent enzyme containing HRDC domain
[Deinococcus geothermalis DSM 11300]
Length = 653
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH 112
A L +Q A+ A L EWR+ AR + S + N TL EIA+++P T A L+ +
Sbjct: 578 ADLTDEQAAIYARLREWRNAEARRQEVSRFIIASNATLAEIARRVPYTEADLKAVRGMGP 637
Query: 113 SYIERYMGPVLSIIKN 128
+ +Y +L +++
Sbjct: 638 ERLRKYGEKILEVVRG 653
>gi|283781120|ref|YP_003371875.1| 3'-5' exonuclease [Pirellula staleyi DSM 6068]
gi|283439573|gb|ADB18015.1| 3'-5' exonuclease [Pirellula staleyi DSM 6068]
Length = 399
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 53 AGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH 112
AG+NA+ LAVV L WRD A+ + +L + L+E+AK+ ++R + +
Sbjct: 206 AGMNARTLAVVRELWTWRDGEAQRRNSPARRILRDDLLLELAKRQTADPKRIRAVRGMER 265
Query: 113 SYIERYMGPVLSIIKNSM 130
I RYM + + ++ +M
Sbjct: 266 GDILRYMPKITACVERAM 283
>gi|152985900|ref|YP_001349451.1| ribonuclease D [Pseudomonas aeruginosa PA7]
gi|150961058|gb|ABR83083.1| ribonuclease D [Pseudomonas aeruginosa PA7]
Length = 393
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 52 GAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
G L QQLAV+ LC WR+ AR + +VL RTL +A+ LP
Sbjct: 227 GWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLP 273
>gi|58265702|ref|XP_570007.1| PM-scl autoantigen [Cryptococcus neoformans var. neoformans JEC21]
gi|57226239|gb|AAW42700.1| PM-scl autoantigen, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1016
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 21/122 (17%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAGLNA-------------QQLAVVAG 65
+ EV +S D ++YE+ +SY + G G A + V
Sbjct: 507 MREVLGKSADTALKMYER-----DSYDIVTGRGSGGWLAAGKKWLPKGEIEQESGWVWRH 561
Query: 66 LCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYI-ERYMGPVLS 124
L +WRD +AR DES Y++PN L +++ A L R+++ + I +Y+ + S
Sbjct: 562 LHDWRDRVAREMDESPFYIMPNNMLRDVSTA--DNTANLSRIIRRDRAPIAAQYIPEITS 619
Query: 125 II 126
II
Sbjct: 620 II 621
>gi|365985620|ref|XP_003669642.1| hypothetical protein NDAI_0D00850 [Naumovozyma dairenensis CBS 421]
gi|343768411|emb|CCD24399.1| hypothetical protein NDAI_0D00850 [Naumovozyma dairenensis CBS 421]
Length = 790
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 68 EWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAA 102
+WRD IAR DDES Y++PN+ L+ + P A
Sbjct: 468 QWRDKIARRDDESPRYIMPNQLLVSLVAYAPVEPA 502
>gi|342179232|sp|A6V8R6.2|RND_PSEA7 RecName: Full=Ribonuclease D; Short=RNase D
Length = 376
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 52 GAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
G L QQLAV+ LC WR+ AR + +VL RTL +A+ LP
Sbjct: 210 GWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLP 256
>gi|388579133|gb|EIM19461.1| hypothetical protein WALSEDRAFT_61456 [Wallemia sebi CBS 633.66]
Length = 789
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 60 LAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKH-SYIERY 118
L V L +WRD IAR +DES + N L ++A + P T ++ + + K ++ +
Sbjct: 428 LEVFRRLHQWRDQIARKEDESVHVIFSNHQLYDLALKQPKTPQEITNVFQKKVPQFVRIH 487
Query: 119 MGPVLSIIKNSMQNAAN 135
+ V I + ++ A N
Sbjct: 488 LKDVAQCINSGVEFAKN 504
>gi|149375206|ref|ZP_01892978.1| ribonuclease D [Marinobacter algicola DG893]
gi|149360570|gb|EDM49022.1| ribonuclease D [Marinobacter algicola DG893]
Length = 382
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 34 YEKELLSE----NSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRT 89
+ KEL ++ N YL + G G L+ QQ V+ L WR+ +R D V+ +
Sbjct: 199 FSKELAAQDNPDNHYLKLRG--GWTLSRQQQGVLKTLVCWREHESRTRDRPRNRVVADAL 256
Query: 90 LIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLS-IIKNSMQNAANFEVIAQKLKEE 146
LI IA++LP + +L + + + RY ++ + + S + + +VIA L +
Sbjct: 257 LIAIAQRLPQSVRELSNIQGLPPAVVRRYGDTIIDKVAEASTADNSGIDVIAAPLSRQ 314
>gi|107100745|ref|ZP_01364663.1| hypothetical protein PaerPA_01001773 [Pseudomonas aeruginosa PACS2]
gi|421515925|ref|ZP_15962611.1| ribonuclease D [Pseudomonas aeruginosa PAO579]
gi|404349653|gb|EJZ75990.1| ribonuclease D [Pseudomonas aeruginosa PAO579]
Length = 380
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 52 GAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
G L QQLAV+ LC WR+ AR + +VL RTL +A+ LP
Sbjct: 214 GWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLP 260
>gi|418594535|ref|ZP_13158323.1| ribonuclease D [Pseudomonas aeruginosa MPAO1/P2]
gi|375043331|gb|EHS35959.1| ribonuclease D [Pseudomonas aeruginosa MPAO1/P2]
Length = 393
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 52 GAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
G L QQLAV+ LC WR+ AR + +VL RTL +A+ LP
Sbjct: 227 GWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLP 273
>gi|218892602|ref|YP_002441471.1| ribonuclease D [Pseudomonas aeruginosa LESB58]
gi|254239667|ref|ZP_04932989.1| ribonuclease D [Pseudomonas aeruginosa 2192]
gi|386059670|ref|YP_005976192.1| ribonuclease D [Pseudomonas aeruginosa M18]
gi|421181719|ref|ZP_15639210.1| ribonuclease D [Pseudomonas aeruginosa E2]
gi|126193045|gb|EAZ57108.1| ribonuclease D [Pseudomonas aeruginosa 2192]
gi|218772830|emb|CAW28624.1| ribonuclease D [Pseudomonas aeruginosa LESB58]
gi|347305976|gb|AEO76090.1| ribonuclease D [Pseudomonas aeruginosa M18]
gi|404543287|gb|EKA52574.1| ribonuclease D [Pseudomonas aeruginosa E2]
Length = 374
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 52 GAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
G L QQLAV+ LC WR+ AR + +VL RTL +A+ LP
Sbjct: 208 GWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLP 254
>gi|453046792|gb|EME94507.1| ribonuclease D [Pseudomonas aeruginosa PA21_ST175]
Length = 393
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 52 GAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
G L QQLAV+ LC WR+ AR + +VL RTL +A+ LP
Sbjct: 227 GWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLP 273
>gi|15596491|ref|NP_249985.1| ribonuclease D [Pseudomonas aeruginosa PAO1]
gi|9947230|gb|AAG04683.1|AE004559_2 ribonuclease D [Pseudomonas aeruginosa PAO1]
Length = 374
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 52 GAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
G L QQLAV+ LC WR+ AR + +VL RTL +A+ LP
Sbjct: 208 GWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLP 254
>gi|116049246|ref|YP_791951.1| ribonuclease D [Pseudomonas aeruginosa UCBPP-PA14]
gi|296390324|ref|ZP_06879799.1| ribonuclease D [Pseudomonas aeruginosa PAb1]
gi|416873541|ref|ZP_11917580.1| ribonuclease D [Pseudomonas aeruginosa 152504]
gi|421175630|ref|ZP_15633306.1| ribonuclease D [Pseudomonas aeruginosa CI27]
gi|115584467|gb|ABJ10482.1| ribonuclease D [Pseudomonas aeruginosa UCBPP-PA14]
gi|334844716|gb|EGM23287.1| ribonuclease D [Pseudomonas aeruginosa 152504]
gi|404532027|gb|EKA41953.1| ribonuclease D [Pseudomonas aeruginosa CI27]
Length = 374
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 52 GAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
G L QQLAV+ LC WR+ AR + +VL RTL +A+ LP
Sbjct: 208 GWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLP 254
>gi|418583147|ref|ZP_13147217.1| ribonuclease D [Pseudomonas aeruginosa MPAO1/P1]
gi|375047367|gb|EHS39913.1| ribonuclease D [Pseudomonas aeruginosa MPAO1/P1]
Length = 376
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 52 GAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
G L QQLAV+ LC WR+ AR + +VL RTL +A+ LP
Sbjct: 210 GWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLP 256
>gi|416856557|ref|ZP_11912131.1| ribonuclease D [Pseudomonas aeruginosa 138244]
gi|420140701|ref|ZP_14648441.1| ribonuclease D [Pseudomonas aeruginosa CIG1]
gi|421161990|ref|ZP_15620882.1| ribonuclease D [Pseudomonas aeruginosa ATCC 25324]
gi|424940506|ref|ZP_18356269.1| ribonuclease D [Pseudomonas aeruginosa NCMG1179]
gi|451988440|ref|ZP_21936569.1| Ribonuclease D [Pseudomonas aeruginosa 18A]
gi|334841819|gb|EGM20440.1| ribonuclease D [Pseudomonas aeruginosa 138244]
gi|346056952|dbj|GAA16835.1| ribonuclease D [Pseudomonas aeruginosa NCMG1179]
gi|403246543|gb|EJY60259.1| ribonuclease D [Pseudomonas aeruginosa CIG1]
gi|404537329|gb|EKA46933.1| ribonuclease D [Pseudomonas aeruginosa ATCC 25324]
gi|451753938|emb|CCQ89092.1| Ribonuclease D [Pseudomonas aeruginosa 18A]
Length = 374
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 52 GAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
G L QQLAV+ LC WR+ AR + +VL RTL +A+ LP
Sbjct: 208 GWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLP 254
>gi|321254177|ref|XP_003192989.1| exosome complex exonuclease RRP6 [Cryptococcus gattii WM276]
gi|317459458|gb|ADV21202.1| Exosome complex exonuclease RRP6 (Ribosomal RNA processing protein
6), putative [Cryptococcus gattii WM276]
Length = 851
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 19 LTEVYKRSYDVCRQLYEKELLSENSYLHIYGLQGAG--------LNAQQLAVVAGLCEWR 70
+ EV +S + ++YE++ + G AG + + V L +WR
Sbjct: 350 MREVLDKSAETALKMYERDSYDIETGRGSGGWLAAGKKWLPKGEIEQESGWVWRHLHDWR 409
Query: 71 DVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYI-ERYMGPVLSII 126
D +AR DES YV+PN L +++ A L R+++ + I +Y+ + SII
Sbjct: 410 DRVAREMDESPFYVMPNNMLRDVSTA--DNTANLSRIIRRDRAPIAAQYIPEITSII 464
>gi|145485444|ref|XP_001428730.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395818|emb|CAK61332.1| unnamed protein product [Paramecium tetraurelia]
Length = 669
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 1 MKIKLSSMPKESEN-SDTP---LTEVYKRSYDVCRQLYEKELLSENSYLH-IYGLQGAGL 55
M+ L + K +EN ++ P + V KRS D ++Y+K L ++ L I Q +
Sbjct: 362 MRQDLKKLNKPNENLNNVPNYYIESVLKRSKDTALKIYKKPLQDQDQSLQTILNKQDRRM 421
Query: 56 NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLL---KSKH 112
A+ ++ L E R+ + D++ Y LPN L ++ + PT+ +L+ L K H
Sbjct: 422 EAKNFDLMVKLLELREELGIQYDQNPRYFLPNPFLFKLVESKPTSIQELKSQLGGDKYIH 481
Query: 113 SYIERYMGPVLSII 126
I+ + L I+
Sbjct: 482 EIIKENLWQFLKIL 495
>gi|392985222|ref|YP_006483809.1| ribonuclease D [Pseudomonas aeruginosa DK2]
gi|419751377|ref|ZP_14277789.1| ribonuclease D [Pseudomonas aeruginosa PADK2_CF510]
gi|384402151|gb|EIE48502.1| ribonuclease D [Pseudomonas aeruginosa PADK2_CF510]
gi|392320727|gb|AFM66107.1| ribonuclease D [Pseudomonas aeruginosa DK2]
Length = 376
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 52 GAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
G L QQLAV+ LC WR+ AR + +VL RTL +A+ LP
Sbjct: 210 GWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLP 256
>gi|343427876|emb|CBQ71402.1| related to RRP6-Exonuclease component of the nuclear exosome
[Sporisorium reilianum SRZ2]
Length = 921
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 114/289 (39%), Gaps = 47/289 (16%)
Query: 19 LTEVYKRSYDVCRQLYEKELL-----SENSYLHIYGLQG--AGLNAQQLA---------- 61
+ +V++RS DV Y KE S + ++ G A L ++
Sbjct: 503 IRDVFERSKDVAMATYAKEEWDSDGESREGWRSVWRKWGGEAALGTEERKDVRDMKREER 562
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGP 121
+V L WRD +AR +DES YVL L+ +A + PT + + + +++ +
Sbjct: 563 LVRVLHRWRDGVAREEDESPRYVLGASHLMMLATRAPTGREGVLACIPPNATGLKKRVDE 622
Query: 122 VLSIIKNSM------QNAANFEVIAQKLKEERMEVASEETEVLVLDTSSNLKIPNVGRES 175
+ ++I + Q A + A LK + + + + DT P+ +
Sbjct: 623 IGALIAAEVQAWEQDQAAKKHTLSAALLKHSNDDDEDDVGQAITRDTPQPTHTPSPAISA 682
Query: 176 VDGVDALVGTTMPHPPA--YTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKEAT 233
+ V A PH A ++ P V +V L + G + P A ++ + +T
Sbjct: 683 ISTVAA------PHVDASIWSTTTDTRPSVRGAVRSLASSLFGRASTPTSAAVAKPQLST 736
Query: 234 HISTLSSSGQSRDLNACKSPSPRVTEAAVQALKKPNRGF----GALLGN 278
S L A PS R + A + A+K GF GAL+GN
Sbjct: 737 TTSKL--------FGALSGPSTRAS-AQIDAVKA---GFVDAVGALVGN 773
>gi|313106280|ref|ZP_07792525.1| ribonuclease D [Pseudomonas aeruginosa 39016]
gi|355645431|ref|ZP_09054144.1| ribonuclease D [Pseudomonas sp. 2_1_26]
gi|386065119|ref|YP_005980423.1| ribonuclease D [Pseudomonas aeruginosa NCGM2.S1]
gi|421155212|ref|ZP_15614693.1| ribonuclease D [Pseudomonas aeruginosa ATCC 14886]
gi|421169151|ref|ZP_15627193.1| ribonuclease D [Pseudomonas aeruginosa ATCC 700888]
gi|310879027|gb|EFQ37621.1| ribonuclease D [Pseudomonas aeruginosa 39016]
gi|348033678|dbj|BAK89038.1| ribonuclease D [Pseudomonas aeruginosa NCGM2.S1]
gi|354828894|gb|EHF12994.1| ribonuclease D [Pseudomonas sp. 2_1_26]
gi|404520842|gb|EKA31492.1| ribonuclease D [Pseudomonas aeruginosa ATCC 14886]
gi|404527609|gb|EKA37756.1| ribonuclease D [Pseudomonas aeruginosa ATCC 700888]
Length = 374
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 52 GAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
G L QQLAV+ LC WR+ AR + +VL RTL +A+ LP
Sbjct: 208 GWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLP 254
>gi|407700585|ref|YP_006825372.1| ribonuclease D [Alteromonas macleodii str. 'Black Sea 11']
gi|407249732|gb|AFT78917.1| ribonuclease D [Alteromonas macleodii str. 'Black Sea 11']
Length = 385
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
LN++QL V+ L WR AR D + +V L E A++L + + L R+ H
Sbjct: 209 LNSEQLTVLQALAAWRLNTARKKDLALNFVFKEGHLFEAAQRLIDSKSGLSRINGVNHQS 268
Query: 115 IERYMGPVLSIIKNS 129
+ RY ++++I+ +
Sbjct: 269 VRRYGDTIITLIEEA 283
>gi|254234416|ref|ZP_04927739.1| ribonuclease D [Pseudomonas aeruginosa C3719]
gi|126166347|gb|EAZ51858.1| ribonuclease D [Pseudomonas aeruginosa C3719]
Length = 374
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 52 GAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLP 98
G L QQLAV+ LC WR+ AR + +VL RTL +A+ LP
Sbjct: 208 GWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLP 254
>gi|114562909|ref|YP_750422.1| ribonuclease D [Shewanella frigidimarina NCIMB 400]
gi|114334202|gb|ABI71584.1| ribonuclease D [Shewanella frigidimarina NCIMB 400]
Length = 370
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
L++QQLA + L +WR A + + + G+V+ + LI +AK+ PTT A+L L
Sbjct: 210 LSSQQLAYLKVLAKWRLAKAVSRNLALGFVVKDHALIALAKKQPTTLAELNSL 262
>gi|406597337|ref|YP_006748467.1| ribonuclease D [Alteromonas macleodii ATCC 27126]
gi|407684351|ref|YP_006799525.1| ribonuclease D [Alteromonas macleodii str. 'English Channel 673']
gi|407688279|ref|YP_006803452.1| ribonuclease D [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|406374658|gb|AFS37913.1| ribonuclease D [Alteromonas macleodii ATCC 27126]
gi|407245962|gb|AFT75148.1| ribonuclease D [Alteromonas macleodii str. 'English Channel 673']
gi|407291659|gb|AFT95971.1| ribonuclease D [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 385
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
LN++QL V+ L WR AR D + +V L E A++L + + L R+ H
Sbjct: 209 LNSEQLTVLQALAAWRLNTARKKDLALNFVFKEGHLFEAAQRLIDSKSGLSRINGVNHQS 268
Query: 115 IERYMGPVLSIIKNS 129
+ RY ++++I+ +
Sbjct: 269 VRRYGDTIITLIEEA 283
>gi|254514489|ref|ZP_05126550.1| ribonuclease D [gamma proteobacterium NOR5-3]
gi|219676732|gb|EED33097.1| ribonuclease D [gamma proteobacterium NOR5-3]
Length = 372
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
L+ +QL + LCEWR+ +AR+ D+ G+++ ++ I IA+ +P L L S
Sbjct: 207 LSPRQLDALRRLCEWREALARSVDKPRGWIVEDKACIAIAQSMPADIEALTDLDVLPASV 266
Query: 115 IERYMGPVLSIIKNS 129
I + +L+ ++ +
Sbjct: 267 IRKQGDTLLACVRGA 281
>gi|221194797|ref|ZP_03567854.1| ribonuclease D [Atopobium rimae ATCC 49626]
gi|221185701|gb|EEE18091.1| ribonuclease D [Atopobium rimae ATCC 49626]
Length = 376
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 43 SYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAA 102
+YLH+ + L +Q+A+ +C WR+ A + +++ + TL+EI K+ P T+
Sbjct: 196 AYLHLK--RSNSLTRRQMALAREICAWREERAAQHNIPRKWIISDETLVEICKRSPATSE 253
Query: 103 KLRRLLKSKHSYIERYMGPVLSIIK 127
+L+R ++ S + + +L+ IK
Sbjct: 254 RLKR-IRGTESLSQESVASILAAIK 277
>gi|343471692|emb|CCD15945.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 604
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 19 LTEVYKRSYDVCRQLYEK-ELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARAD 77
L V++ S + + YEK +L + +Y G GL+ QL V + WRD AR
Sbjct: 422 LVHVFQESRALSLERYEKPQLDPDATYKLALGRSLGGLSLSQLQVAREIFNWRDAAAREA 481
Query: 78 DESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKN 128
D+S V+ ++ IA +LP +A ++ + + + +L I+K+
Sbjct: 482 DDSPSAVMHISCVLSIATRLPLSANEVLKCCSPVSVIVRTNVMKLLQIVKS 532
>gi|167623763|ref|YP_001674057.1| ribonuclease D [Shewanella halifaxensis HAW-EB4]
gi|167353785|gb|ABZ76398.1| ribonuclease D [Shewanella halifaxensis HAW-EB4]
Length = 369
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
L + QLAV+ L +WR A D + G+V+ + LI +AK+LP T+ L +L
Sbjct: 210 LTSNQLAVLRDLAKWRMQRALQKDLALGFVVKDHALIGLAKKLPKTSNDLYKL 262
>gi|88705065|ref|ZP_01102777.1| ribonuclease D [Congregibacter litoralis KT71]
gi|88700760|gb|EAQ97867.1| ribonuclease D [Congregibacter litoralis KT71]
Length = 370
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
L+ +QL + LCEWR+ +ARA D+ G+++ ++ + IA +P L L S
Sbjct: 207 LSRRQLEALRRLCEWREDLARAVDKPRGWIVEDKAFLAIAMAIPEDHDALAELDVLPASV 266
Query: 115 IERYMGPVLSIIKNSMQ 131
+ + +L+ ++ ++Q
Sbjct: 267 LRKQGDSLLACVEQALQ 283
>gi|334336359|ref|YP_004541511.1| UvrD/REP helicase [Isoptericola variabilis 225]
gi|334106727|gb|AEG43617.1| UvrD/REP helicase [Isoptericola variabilis 225]
Length = 680
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 66 LCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSI 125
L EWR +AR D+ +L + TL EIA+ P++ A+L R+ + I+RY +L++
Sbjct: 614 LREWRLSVARETDKPAYTILGDATLAEIAEVRPSSIAQLARINGIGPAKIDRYGATILAL 673
Query: 126 IKNS 129
+ ++
Sbjct: 674 VADA 677
>gi|385331623|ref|YP_005885574.1| ribonuclease D [Marinobacter adhaerens HP15]
gi|311694773|gb|ADP97646.1| ribonuclease D [Marinobacter adhaerens HP15]
Length = 385
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 41 ENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTT 100
+N YL + G L+AQQ V+ L WR+ + D VL + LI IA++LP +
Sbjct: 213 DNHYLKLRA--GWTLSAQQQGVLKELVRWRERECQRRDRPRNRVLADALLIAIAERLPAS 270
Query: 101 AAKLRRLLKSKHSYIERYMGPVLSII-KNSMQNAANFEVIAQKLKEER 147
+L + + RY ++ ++ + S + ++ E IA L ++
Sbjct: 271 VKELSNIQGVPSGAVRRYGDTLIELVSRGSTADNSSLERIAPPLSRDQ 318
>gi|71024099|ref|XP_762279.1| hypothetical protein UM06132.1 [Ustilago maydis 521]
gi|46101781|gb|EAK87014.1| hypothetical protein UM06132.1 [Ustilago maydis 521]
Length = 1027
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 62 VVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGP 121
+V L WRD +AR +DES Y+L L+ +A + PTT + + + +++ +
Sbjct: 579 LVRALHRWRDTVAREEDESPRYILGANNLMMLAARAPTTKQGVLACIPPNATGLKKRIDE 638
Query: 122 VLSIIKNSMQNAANFEVIAQKLKEE 146
+ S+I M A+++ Q ++E
Sbjct: 639 LASLI---MAEVADWQKDQQARRDE 660
>gi|403333475|gb|EJY65839.1| hypothetical protein OXYTRI_14003 [Oxytricha trifallax]
Length = 1005
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 34 YEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEI 93
Y K+ +++N + GL LN Q L +WRD I+R +DES Y LP +L+
Sbjct: 365 YHKKQMTQN----LNGLDNNSLNYQ-------LLKWRDDISRLEDESLEYTLPT-SLLNS 412
Query: 94 AKQLPTTAAKLRRLLKSKHSYIERYMGPVL 123
Q + K+ +++ H ++ Y+ P+L
Sbjct: 413 LVQNQQSIFKVEDIVELSHKTLKNYL-PLL 441
>gi|270012325|gb|EFA08773.1| hypothetical protein TcasGA2_TC006462 [Tribolium castaneum]
Length = 421
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 28 DVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPN 87
+ C+ LY K + + +YL + ++ +QL V+ L WR IA+ D++ G VL
Sbjct: 253 NCCKILYPK--VEDEAYLSVRR-NVEEIHKRQLLVLEKLNSWRHQIAQYLDKNVGCVLSK 309
Query: 88 RTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSII 126
+ + Q+P+ +A + ++ S+ S+++ ++ V+ I+
Sbjct: 310 SNMETLVLQMPSDSADIMQI--SQSSHVKEHLDEVMQIL 346
>gi|333369485|ref|ZP_08461599.1| ribonuclease D [Psychrobacter sp. 1501(2011)]
gi|332971116|gb|EGK10083.1| ribonuclease D [Psychrobacter sp. 1501(2011)]
Length = 437
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 32 QLYEKELL------SENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVL 85
QLY KEL + +YL + + G +Q+AV+ + WR+ +ARA ++ ++L
Sbjct: 230 QLYTKELYEAANIEDDATYLAMADFRYTG---EQMAVLQAVSSWREALARATNQPKTFIL 286
Query: 86 PNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNS 129
+ + ++ + P + +L + S I Y ++ II +
Sbjct: 287 KKQAVRDVVVEFPKSVKQLTQKTTMHRSMIHLYGEELIDIINKA 330
>gi|429730644|ref|ZP_19265290.1| putative ribonuclease D [Corynebacterium durum F0235]
gi|429147082|gb|EKX90112.1| putative ribonuclease D [Corynebacterium durum F0235]
Length = 397
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 59 QLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
QLAV L R+ IA D S G VL NR L+++A+ LPT+ +L ++
Sbjct: 223 QLAVAQALWTTREAIALRKDLSPGRVLRNRVLLDVARTLPTSPVELAKI 271
>gi|429963352|gb|ELA42896.1| hypothetical protein VICG_00211 [Vittaforma corneae ATCC 50505]
Length = 402
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 42 NSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTA 101
N +++ YG+ + N V L + R +A+ +DES YV+ + L ++ +P+
Sbjct: 265 NDFMNFYGVHASFRN-----VAEDLMKLRVYLAKKNDESLQYVMTDIQLYQLILNMPSNV 319
Query: 102 AKLRRLLKSKHSYIERYMGPVLSII 126
+ LL S + ++G VL I+
Sbjct: 320 DEFEFLLNRMSSILRLHVGDVLLIL 344
>gi|426401752|ref|YP_007020724.1| ribonuclease D [Candidatus Endolissoclinum patella L2]
gi|425858420|gb|AFX99456.1| ribonuclease D [Candidatus Endolissoclinum patella L2]
Length = 386
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 60 LAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL--RRLLKSKHSYIER 117
L V+ L WR++ A+ D Y+L + L+ IA QLPT++A+L R K +
Sbjct: 212 LVVLRALAAWRELKAQKIDIPRNYILRDNALVSIASQLPTSSAELSCSRFFNQKFAN-SI 270
Query: 118 YMGPVLSIIKNSMQNAANF--EVIAQKLKEERMEVASEETEVLV 159
+ +L +I+ ++++ N +VI + K + + +E +VL+
Sbjct: 271 IIKEILEVIQTALKSPKNTWPQVIHHQGKTRKRQPIAEMLQVLL 314
>gi|319784197|ref|YP_004143673.1| ribonuclease D [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317170085|gb|ADV13623.1| ribonuclease D [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 383
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
Q+LA+V G+ WR+ AR D G VL + + E+A+Q P AA L +L
Sbjct: 210 QELAIVQGVAAWREREARERDVPRGRVLKDDAIYEVAQQAPRDAAALGKL 259
>gi|305680942|ref|ZP_07403749.1| putative ribonuclease D [Corynebacterium matruchotii ATCC 14266]
gi|305659147|gb|EFM48647.1| putative ribonuclease D [Corynebacterium matruchotii ATCC 14266]
Length = 408
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 56 NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
++QL V L + R+ +A+A D + +LP++TL+ +A +LPTT K+
Sbjct: 225 TSKQLQVARWLWQVREKLAQASDTAVSRLLPDKTLVALATELPTTVPKV 273
>gi|262279001|ref|ZP_06056786.1| ribonuclease D [Acinetobacter calcoaceticus RUH2202]
gi|262259352|gb|EEY78085.1| ribonuclease D [Acinetobacter calcoaceticus RUH2202]
Length = 374
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 41/71 (57%)
Query: 58 QQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIER 117
+QL + L EWRD I +A ++ ++L N T+I++ ++ P + +L ++ + + +
Sbjct: 209 RQLMQLQNLSEWRDYIVKATNQPRSFILRNSTMIDMVEKNPRNSFQLSQVKDIRPNVVRE 268
Query: 118 YMGPVLSIIKN 128
Y +L ++K+
Sbjct: 269 YGKTILELLKD 279
>gi|390630608|ref|ZP_10258587.1| ATP-dependent DNA helicase (RecQ) [Weissella confusa LBAE C39-2]
gi|390484165|emb|CCF30935.1| ATP-dependent DNA helicase (RecQ) [Weissella confusa LBAE C39-2]
Length = 606
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
L+ QQ V L +WR +AR + + +RTL+E+AKQ P A+L + +
Sbjct: 531 LDEQQRNVFEALRKWRLELARVTEIPPFIIFNDRTLVELAKQQPLNDAELMAVSGIGEAK 590
Query: 115 IERYMGPVLSIIKNS 129
ERY VL +I S
Sbjct: 591 AERYGVDVLRVIAES 605
>gi|255283749|ref|ZP_05348304.1| putative ATP-dependent protease HslVU, peptidase subunit
[Bryantella formatexigens DSM 14469]
gi|255265632|gb|EET58837.1| hypothetical protein BRYFOR_09125 [Marvinbryantia formatexigens DSM
14469]
Length = 2109
Score = 38.9 bits (89), Expect = 6.5, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 5/131 (3%)
Query: 135 NFEVIAQKLKEERMEVASEETEVLVLDT-SSNLKIP---NVGRESVDGVDALVGTTMPHP 190
+F I+ ++K + +EV ++++E+++ + +++P N G ES A T P
Sbjct: 47 SFAEISDEIKTQTLEVGAQQSEIILPEELEVTVELPDAGNSGGESETDTSATEPETQPKT 106
Query: 191 PAYTQLKQEPPKVGSSVAELDRNGLGSFAHPGEAIASENKEATHISTLSSSGQSRDLNAC 250
TQ +Q P+ S E +G + P EA E + T T + G +D
Sbjct: 107 EPETQSEQTEPETASGQTEPQSDGQPTNQTPDEA-GGEKQTDTGAITTETQGPVQDDTTE 165
Query: 251 KSPSPRVTEAA 261
+ P+ V E A
Sbjct: 166 EVPTETVPEQA 176
>gi|320107181|ref|YP_004182771.1| RecQ familyATP-dependent DNA helicase [Terriglobus saanensis
SP1PR4]
gi|319925702|gb|ADV82777.1| ATP-dependent DNA helicase, RecQ family [Terriglobus saanensis
SP1PR4]
Length = 774
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 66 LCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSI 125
L EWR +A+ + V P+R L EI + +P T A L ++ + +ER+ + +
Sbjct: 612 LREWRKGVAKELSQPAFCVFPDRVLAEIVRDMPATNADLLQVKGMGVAKVERWGAAICGV 671
Query: 126 IKN 128
I N
Sbjct: 672 INN 674
>gi|87122723|ref|ZP_01078598.1| Ribonuclease D [Marinomonas sp. MED121]
gi|86162020|gb|EAQ63310.1| Ribonuclease D [Marinomonas sp. MED121]
Length = 387
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRR 106
LN + L ++ L WRD ARA+D G V+ +RTL IAK P L R
Sbjct: 223 LNPKSLTLLRLLFVWRDKTARAEDVPKGQVIKDRTLWAIAKFFPDNHNALSR 274
>gi|225021280|ref|ZP_03710472.1| hypothetical protein CORMATOL_01292 [Corynebacterium matruchotii
ATCC 33806]
gi|224946013|gb|EEG27222.1| hypothetical protein CORMATOL_01292 [Corynebacterium matruchotii
ATCC 33806]
Length = 408
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 56 NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKL 104
++QL V L + R+ +A+A D + +LP++TL+ +A +LPTT K+
Sbjct: 225 TSKQLQVARWLWQVREKLAQASDTAVSRLLPDKTLVALATELPTTVPKV 273
>gi|148653524|ref|YP_001280617.1| 3'-5' exonuclease [Psychrobacter sp. PRwf-1]
gi|148572608|gb|ABQ94667.1| 3'-5' exonuclease [Psychrobacter sp. PRwf-1]
Length = 431
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 32 QLYEKELL------SENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVL 85
QLY KEL + +YL + +QLAV+ + WR+ +ARA ++ +VL
Sbjct: 227 QLYAKELYESANIEDDATYL---AMADFRYTPEQLAVLQAVSSWREALARATNQPKTFVL 283
Query: 86 PNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSIIKNS 129
+ + ++ ++PT+ +L + S + Y ++ +I +
Sbjct: 284 KKQAVRDLVVEMPTSIKQLTQKTTMHRSIVRLYGDELIQVINQA 327
>gi|410862214|ref|YP_006977448.1| ribonuclease D [Alteromonas macleodii AltDE1]
gi|410819476|gb|AFV86093.1| ribonuclease D [Alteromonas macleodii AltDE1]
Length = 323
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
LN++QL V+ L WR AR D + +V L E A++L + L R+ H
Sbjct: 147 LNSEQLTVLQALAAWRLNTARKKDLALNFVFKEGHLFEAAQRLIDDKSGLSRINGVNHQS 206
Query: 115 IERYMGPVLSIIKNS 129
+ RY ++++I+ +
Sbjct: 207 VRRYGDTIVTLIEEA 221
>gi|332141837|ref|YP_004427575.1| ribonuclease D [Alteromonas macleodii str. 'Deep ecotype']
gi|327551859|gb|AEA98577.1| ribonuclease D [Alteromonas macleodii str. 'Deep ecotype']
Length = 385
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 55 LNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSY 114
LN++QL V+ L WR AR D + +V L E A++L + L R+ H
Sbjct: 209 LNSEQLTVLQALAAWRLNTARKKDLALNFVFKEGHLFEAAQRLIDDKSGLSRINGVNHQS 268
Query: 115 IERYMGPVLSIIKNS 129
+ RY ++++I+ +
Sbjct: 269 VRRYGDTIVTLIEEA 283
>gi|358449072|ref|ZP_09159564.1| 3'-5' exonuclease [Marinobacter manganoxydans MnI7-9]
gi|357226867|gb|EHJ05340.1| 3'-5' exonuclease [Marinobacter manganoxydans MnI7-9]
Length = 385
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 41 ENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTT 100
+N YL + G L+AQQ V+ L WR+ + D VL + LI IA++LP +
Sbjct: 213 DNHYLKLRA--GWTLSAQQQGVLKELVRWRERECQRRDRPRNRVLADALLIAIAERLPAS 270
Query: 101 AAKLRRLLKSKHSYIERYMGPVLSII-KNSMQNAANFEVIAQKLKEER 147
+L + + RY ++ ++ + S + ++ E IA L ++
Sbjct: 271 LKELSNIQGVPSGAVRRYGDTLIELVSQGSTADNSSLERIAPPLSRDQ 318
>gi|441508350|ref|ZP_20990274.1| putative ribonuclease [Gordonia aichiensis NBRC 108223]
gi|441447378|dbj|GAC48235.1| putative ribonuclease [Gordonia aichiensis NBRC 108223]
Length = 432
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 56 NAQQLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRL 107
N + LA V LC R+ +A+ D + G +LP+ ++ A +PT+ A+L RL
Sbjct: 240 NGRSLAAVRELCSAREELAQRRDVAPGRILPDSAIVTAANAMPTSVAELTRL 291
>gi|322694480|gb|EFY86308.1| hypothetical protein MAC_07612 [Metarhizium acridum CQMa 102]
Length = 315
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 218 FAHPGEAIASENKEATHISTLSSSGQSRDLNACKSPSPR-----------VTEAAVQALK 266
F HP I + K + SG+ + C+ P P+ V E A+ + K
Sbjct: 130 FGHPNVHILNNFKLWVEEGLPTESGELYSVECCQYPIPKLDESKVASFEQVKEVALDSNK 189
Query: 267 KPNRGFGALLGNPKRKFDGEKKD-KEAMKLEQIKSSVNLPFHSI-------FARDEQLKP 318
+ G L P +F G+ + +E + + S+NLPF ++ F E L+
Sbjct: 190 EGAEGVQVLDARPSGRFTGKDPEPREGLSSGHLPGSINLPFSALLDPKTKAFPSPEILRS 249
Query: 319 VDVMKS-EPNKPDLPFPSSFGSGEQTKPIIE 348
+ K +PNKP + SS G+G T IIE
Sbjct: 250 ILQGKGVDPNKPVI---SSCGTG-VTACIIE 276
>gi|168065991|ref|XP_001784928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663515|gb|EDQ50275.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 230
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 17/94 (18%)
Query: 452 LKPFDFEAARKQIEFGE------DAKEKSAG------VDGNKRK-----PVNSGDKKKVS 494
KPFD+ AR++I G+ D + S G V+ NKR+ P +G +
Sbjct: 136 FKPFDYGVARREIGLGDNLVSRKDDGQASRGRGRGRPVNPNKRQKQLAPPSTNGPVQPFD 195
Query: 495 AVDQAQKDDGTKELSQGRRRSAFPATGNRSATFR 528
+ + +++ + + +RR FP +GNR+A+F+
Sbjct: 196 PLRRVRQEPRPEGIPAAKRRQVFPQSGNRTASFK 229
>gi|91088803|ref|XP_968984.1| PREDICTED: similar to Rrp6 CG7292-PB [Tribolium castaneum]
Length = 377
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 28 DVCRQLYEKELLSENSYLHIYGLQGAGLNAQQLAVVAGLCEWRDVIARADDESTGYVLPN 87
+ C+ LY K + + +YL + ++ +QL V+ L WR IA+ D++ G VL
Sbjct: 253 NCCKILYPK--VEDEAYLSVRR-NVEEIHKRQLLVLEKLNSWRHQIAQYLDKNVGCVLSK 309
Query: 88 RTLIEIAKQLPTTAAKLRRLLKSKHSYIERYMGPVLSII 126
+ + Q+P+ +A + ++ S+ S+++ ++ V+ I+
Sbjct: 310 SNMETLVLQMPSDSADIMQI--SQSSHVKEHLDEVMQIL 346
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.308 0.127 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,232,476,019
Number of Sequences: 23463169
Number of extensions: 359480057
Number of successful extensions: 972937
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 732
Number of HSP's that attempted gapping in prelim test: 971032
Number of HSP's gapped (non-prelim): 2334
length of query: 528
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 381
effective length of database: 8,910,109,524
effective search space: 3394751728644
effective search space used: 3394751728644
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 79 (35.0 bits)