Query 009715
Match_columns 528
No_of_seqs 526 out of 3729
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 11:24:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009715.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009715hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 2.2E-43 7.4E-48 378.1 38.2 372 89-525 39-560 (611)
2 1nr0_A Actin interacting prote 100.0 4.3E-42 1.5E-46 368.1 40.1 372 86-525 78-604 (611)
3 2ymu_A WD-40 repeat protein; u 100.0 2.8E-40 9.6E-45 351.2 41.8 363 87-526 200-574 (577)
4 1got_B GT-beta; complex (GTP-b 100.0 1.5E-39 5.3E-44 322.6 36.2 271 166-491 65-340 (340)
5 3ow8_A WD repeat-containing pr 100.0 2.1E-39 7.1E-44 319.0 35.5 286 99-493 22-320 (321)
6 1vyh_C Platelet-activating fac 100.0 1.1E-39 3.7E-44 332.2 34.3 280 103-492 102-409 (410)
7 2ymu_A WD-40 repeat protein; u 100.0 2.7E-38 9.2E-43 336.0 43.4 398 50-525 14-450 (577)
8 4gqb_B Methylosome protein 50; 100.0 4.8E-40 1.6E-44 326.4 27.7 300 89-497 14-334 (344)
9 2pbi_B Guanine nucleotide-bind 100.0 1.8E-38 6.2E-43 316.7 38.0 273 167-491 75-354 (354)
10 1vyh_C Platelet-activating fac 100.0 6.9E-39 2.4E-43 326.3 35.2 278 208-525 106-404 (410)
11 2ynn_A Coatomer subunit beta'; 100.0 1.7E-38 6E-43 309.9 33.0 274 208-524 11-295 (304)
12 3ow8_A WD repeat-containing pr 100.0 5.2E-38 1.8E-42 309.0 36.1 274 208-525 30-314 (321)
13 3frx_A Guanine nucleotide-bind 100.0 7.3E-38 2.5E-42 307.7 36.3 272 168-494 30-317 (319)
14 3iz6_a 40S ribosomal protein R 100.0 1.1E-38 3.9E-43 321.4 29.4 308 91-496 48-377 (380)
15 2ynn_A Coatomer subunit beta'; 100.0 1.2E-37 4E-42 304.0 32.1 285 102-495 6-303 (304)
16 4g56_B MGC81050 protein; prote 100.0 5.9E-38 2E-42 313.3 29.7 298 171-525 19-336 (357)
17 4ery_A WD repeat-containing pr 100.0 3E-36 1E-40 294.8 40.4 270 167-493 34-311 (312)
18 4gqb_B Methylosome protein 50; 100.0 2E-37 6.8E-42 307.6 31.4 276 165-525 39-324 (344)
19 2xzm_R RACK1; ribosome, transl 100.0 1E-36 3.5E-41 302.6 35.6 277 166-495 37-341 (343)
20 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.5E-36 5.2E-41 301.7 35.7 280 165-497 25-338 (345)
21 2hes_X YDR267CP; beta-propelle 100.0 1.5E-36 5.2E-41 299.8 34.7 297 99-494 4-328 (330)
22 3sfz_A APAF-1, apoptotic pepti 100.0 5.4E-37 1.9E-41 354.7 36.3 395 87-525 635-1151(1249)
23 1got_B GT-beta; complex (GTP-b 100.0 3.3E-36 1.1E-40 298.6 36.4 271 208-525 53-336 (340)
24 4g56_B MGC81050 protein; prote 100.0 4.2E-37 1.4E-41 307.2 29.4 282 165-496 51-345 (357)
25 2oaj_A Protein SNI1; WD40 repe 100.0 1.5E-36 5.2E-41 337.5 32.2 404 86-525 36-654 (902)
26 1gxr_A ESG1, transducin-like e 100.0 1.7E-35 5.7E-40 291.5 35.5 304 165-525 18-330 (337)
27 3sfz_A APAF-1, apoptotic pepti 100.0 3.7E-36 1.3E-40 347.7 35.8 397 86-520 720-1197(1249)
28 3frx_A Guanine nucleotide-bind 100.0 1.7E-35 5.7E-40 290.9 34.6 283 207-525 14-310 (319)
29 2hes_X YDR267CP; beta-propelle 100.0 1.8E-35 6E-40 292.1 34.7 276 170-525 26-321 (330)
30 1pgu_A Actin interacting prote 100.0 2.5E-35 8.6E-40 315.0 38.4 373 88-525 38-565 (615)
31 2pbi_B Guanine nucleotide-bind 100.0 1.9E-35 6.5E-40 294.8 34.9 274 208-525 62-350 (354)
32 1erj_A Transcriptional repress 100.0 3.2E-35 1.1E-39 297.5 36.5 278 105-494 60-389 (393)
33 4aow_A Guanine nucleotide-bind 100.0 4E-35 1.4E-39 289.5 35.9 297 100-496 29-339 (340)
34 4ery_A WD repeat-containing pr 100.0 2.8E-35 9.6E-40 287.9 32.9 268 208-521 21-299 (312)
35 1gxr_A ESG1, transducin-like e 100.0 7.2E-35 2.5E-39 287.0 35.9 274 165-492 60-335 (337)
36 1pgu_A Actin interacting prote 100.0 3.3E-35 1.1E-39 314.1 36.2 380 88-525 87-607 (615)
37 2pm9_A Protein WEB1, protein t 100.0 4.2E-36 1.4E-40 305.4 27.8 310 165-525 21-407 (416)
38 3iz6_a 40S ribosomal protein R 100.0 4.6E-36 1.6E-40 302.3 27.5 276 165-525 75-368 (380)
39 1r5m_A SIR4-interacting protei 100.0 1.1E-35 3.7E-40 302.4 29.3 348 90-494 26-425 (425)
40 3dm0_A Maltose-binding peripla 100.0 5.2E-35 1.8E-39 318.0 36.0 272 168-493 395-692 (694)
41 3fm0_A Protein CIAO1; WDR39,SG 100.0 5E-35 1.7E-39 290.7 32.3 274 209-525 14-328 (345)
42 3zwl_B Eukaryotic translation 100.0 1.4E-34 5E-39 288.3 35.4 295 96-496 19-348 (369)
43 2xzm_R RACK1; ribosome, transl 100.0 2.7E-34 9.2E-39 285.2 36.8 282 208-525 19-333 (343)
44 2oaj_A Protein SNI1; WD40 repe 100.0 6.6E-35 2.3E-39 324.3 34.0 369 106-525 14-598 (902)
45 1r5m_A SIR4-interacting protei 100.0 6.7E-35 2.3E-39 296.6 30.8 311 165-526 54-419 (425)
46 1erj_A Transcriptional repress 100.0 3.6E-34 1.2E-38 289.8 35.4 282 165-525 73-382 (393)
47 3vl1_A 26S proteasome regulato 100.0 8.7E-35 3E-39 296.3 31.0 308 165-523 65-410 (420)
48 3vl1_A 26S proteasome regulato 100.0 1.3E-34 4.3E-39 295.1 30.4 314 111-494 58-419 (420)
49 3gre_A Serine/threonine-protei 100.0 9.9E-34 3.4E-38 290.4 34.8 318 93-491 47-437 (437)
50 3ei3_B DNA damage-binding prot 100.0 1.4E-33 4.8E-38 284.0 34.5 303 91-494 55-382 (383)
51 2pm9_A Protein WEB1, protein t 100.0 6.6E-35 2.3E-39 296.5 24.9 345 108-495 11-415 (416)
52 4a11_B DNA excision repair pro 100.0 3.3E-33 1.1E-37 282.7 36.3 323 87-498 21-369 (408)
53 3k26_A Polycomb protein EED; W 100.0 1.8E-33 6.2E-38 280.2 33.8 271 168-493 34-365 (366)
54 2pm7_B Protein transport prote 100.0 2.4E-33 8.2E-38 272.5 33.1 242 166-494 19-285 (297)
55 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.5E-33 1.5E-37 286.4 36.7 292 166-524 127-430 (445)
56 2pm7_B Protein transport prote 100.0 1.8E-33 6E-38 273.5 31.5 243 208-525 7-278 (297)
57 3mkq_A Coatomer beta'-subunit; 100.0 9.3E-34 3.2E-38 313.4 33.0 357 103-525 7-416 (814)
58 1sq9_A Antiviral protein SKI8; 100.0 7.4E-34 2.5E-38 287.0 29.5 311 103-495 10-396 (397)
59 4aez_A CDC20, WD repeat-contai 100.0 3.4E-33 1.1E-37 283.4 33.6 273 167-497 102-383 (401)
60 3v7d_B Cell division control p 100.0 1.9E-32 6.4E-37 283.1 39.0 346 92-491 103-460 (464)
61 4aow_A Guanine nucleotide-bind 100.0 8.3E-33 2.8E-37 272.9 34.7 280 207-525 35-330 (340)
62 3odt_A Protein DOA1; ubiquitin 100.0 2.2E-32 7.7E-37 266.4 37.0 268 167-497 28-299 (313)
63 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.7E-33 3.3E-37 283.9 36.1 325 90-495 99-443 (445)
64 2j04_B YDR362CP, TAU91; beta p 100.0 1.2E-34 4.2E-39 302.3 21.5 339 107-496 131-519 (524)
65 4e54_B DNA damage-binding prot 100.0 4.4E-34 1.5E-38 293.1 24.3 278 167-497 131-433 (435)
66 1k8k_C P40, ARP2/3 complex 41 100.0 4.3E-33 1.5E-37 278.5 30.9 315 105-496 4-363 (372)
67 4gga_A P55CDC, cell division c 100.0 2.6E-32 8.8E-37 278.7 36.4 272 168-496 116-397 (420)
68 3dwl_C Actin-related protein 2 100.0 1.9E-33 6.4E-38 282.3 26.8 329 105-492 7-377 (377)
69 3i2n_A WD repeat-containing pr 100.0 4.2E-33 1.4E-37 276.8 27.3 307 103-495 12-354 (357)
70 3k26_A Polycomb protein EED; W 100.0 3.9E-33 1.3E-37 277.8 26.8 271 208-525 16-359 (366)
71 3v7d_B Cell division control p 100.0 9E-32 3.1E-36 278.0 36.1 292 166-522 130-452 (464)
72 3dm0_A Maltose-binding peripla 100.0 3.3E-32 1.1E-36 295.9 34.4 279 208-525 380-686 (694)
73 3i2n_A WD repeat-containing pr 100.0 1E-32 3.5E-37 274.0 27.3 278 208-525 16-346 (357)
74 3bg1_A Protein SEC13 homolog; 100.0 4.4E-33 1.5E-37 273.2 23.7 242 166-494 23-293 (316)
75 3bg1_A Protein SEC13 homolog; 100.0 3.1E-33 1.1E-37 274.2 22.4 242 208-525 11-286 (316)
76 1k8k_C P40, ARP2/3 complex 41 100.0 4.9E-32 1.7E-36 270.8 31.6 273 209-525 7-354 (372)
77 3ei3_B DNA damage-binding prot 100.0 3.3E-32 1.1E-36 274.0 30.5 270 207-525 70-375 (383)
78 3f3f_A Nucleoporin SEH1; struc 100.0 3.1E-32 1.1E-36 268.5 28.9 294 166-496 21-339 (351)
79 4h5i_A Guanine nucleotide-exch 100.0 9.5E-32 3.2E-36 269.1 32.5 291 111-496 16-345 (365)
80 3zwl_B Eukaryotic translation 100.0 2.3E-31 7.9E-36 265.1 34.6 270 208-525 30-339 (369)
81 1sq9_A Antiviral protein SKI8; 100.0 3.6E-32 1.2E-36 274.6 28.4 275 208-525 14-388 (397)
82 3mkq_A Coatomer beta'-subunit; 100.0 4.4E-31 1.5E-35 291.9 37.8 274 165-494 22-302 (814)
83 2aq5_A Coronin-1A; WD40 repeat 100.0 7.2E-32 2.5E-36 273.6 28.4 278 173-496 52-344 (402)
84 3dw8_B Serine/threonine-protei 100.0 4.6E-32 1.6E-36 278.3 27.3 279 209-523 27-438 (447)
85 3odt_A Protein DOA1; ubiquitin 100.0 6.1E-31 2.1E-35 256.2 32.2 264 208-525 16-289 (313)
86 4ggc_A P55CDC, cell division c 100.0 3.2E-30 1.1E-34 251.8 36.8 272 169-494 37-315 (318)
87 4e54_B DNA damage-binding prot 100.0 9.6E-32 3.3E-36 275.8 26.6 269 209-520 118-419 (435)
88 3jrp_A Fusion protein of prote 100.0 4.6E-31 1.6E-35 264.1 30.9 238 166-493 21-286 (379)
89 1yfq_A Cell cycle arrest prote 100.0 5.4E-31 1.8E-35 260.3 29.0 269 208-524 9-315 (342)
90 1p22_A F-BOX/WD-repeat protein 100.0 3.8E-31 1.3E-35 271.2 28.8 264 166-497 141-417 (435)
91 3jrp_A Fusion protein of prote 100.0 7.5E-31 2.6E-35 262.6 29.9 244 208-525 9-280 (379)
92 3dwl_C Actin-related protein 2 100.0 2.5E-32 8.5E-37 274.1 18.7 240 209-493 10-280 (377)
93 3mmy_A MRNA export factor; mRN 100.0 2.7E-30 9.2E-35 257.3 32.7 272 208-523 37-337 (368)
94 3gre_A Serine/threonine-protei 100.0 5E-31 1.7E-35 270.2 27.2 280 209-525 62-433 (437)
95 2j04_B YDR362CP, TAU91; beta p 100.0 7.5E-32 2.6E-36 281.3 21.2 316 165-525 170-510 (524)
96 4h5i_A Guanine nucleotide-exch 100.0 5.9E-30 2E-34 256.1 32.8 280 166-525 24-336 (365)
97 4aez_A CDC20, WD repeat-contai 100.0 1.3E-29 4.3E-34 257.1 34.7 264 212-525 95-373 (401)
98 2j04_A TAU60, YPL007P, hypothe 100.0 3E-31 1E-35 270.9 19.9 313 107-521 13-350 (588)
99 3f3f_A Nucleoporin SEH1; struc 100.0 5.8E-30 2E-34 252.3 28.4 237 208-525 9-330 (351)
100 2aq5_A Coronin-1A; WD40 repeat 100.0 1.5E-30 5.2E-35 263.8 24.9 270 212-522 36-334 (402)
101 3dw8_B Serine/threonine-protei 100.0 7.5E-30 2.6E-34 261.8 29.2 302 165-492 37-444 (447)
102 1p22_A F-BOX/WD-repeat protein 100.0 2.3E-29 7.9E-34 258.0 30.5 261 209-525 132-407 (435)
103 3lrv_A PRE-mRNA-splicing facto 100.0 6.3E-30 2.1E-34 253.6 23.1 266 165-523 45-324 (343)
104 4a11_B DNA excision repair pro 100.0 1.7E-29 5.9E-34 255.3 25.7 285 208-525 41-358 (408)
105 4gga_A P55CDC, cell division c 100.0 6.9E-29 2.4E-33 253.3 29.3 267 88-413 124-401 (420)
106 3mmy_A MRNA export factor; mRN 100.0 2.5E-28 8.5E-33 243.0 30.1 304 90-493 20-345 (368)
107 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.9E-28 1.7E-32 249.3 33.2 242 208-494 100-391 (450)
108 3jro_A Fusion protein of prote 100.0 7E-29 2.4E-33 271.8 28.0 244 208-525 7-278 (753)
109 3jro_A Fusion protein of prote 100.0 4.8E-29 1.6E-33 273.0 26.1 238 167-494 20-285 (753)
110 2xyi_A Probable histone-bindin 100.0 1.6E-28 5.6E-33 251.3 28.4 254 209-495 127-411 (430)
111 4gq1_A NUP37; propeller, trans 100.0 2.8E-29 9.7E-34 253.8 22.4 248 212-524 91-382 (393)
112 3vu4_A KMHSV2; beta-propeller 100.0 8.9E-28 3E-32 239.4 31.3 307 93-495 3-337 (355)
113 1yfq_A Cell cycle arrest prote 100.0 9.1E-29 3.1E-33 244.2 23.7 280 105-492 7-322 (342)
114 2j04_A TAU60, YPL007P, hypothe 100.0 3.2E-28 1.1E-32 248.6 24.6 246 165-491 24-294 (588)
115 4ggc_A P55CDC, cell division c 100.0 1.3E-27 4.4E-32 233.3 26.6 262 88-408 44-316 (318)
116 4gq1_A NUP37; propeller, trans 100.0 3.8E-28 1.3E-32 245.5 23.4 241 165-493 98-388 (393)
117 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2E-27 6.8E-32 244.7 29.2 287 211-520 5-373 (450)
118 3bws_A Protein LP49; two-domai 100.0 1.4E-26 4.7E-31 236.7 34.1 281 165-494 131-432 (433)
119 1l0q_A Surface layer protein; 100.0 5.8E-26 2E-30 228.8 37.6 325 136-522 6-368 (391)
120 3vu4_A KMHSV2; beta-propeller 100.0 3.9E-27 1.3E-31 234.7 28.4 253 165-526 28-330 (355)
121 1l0q_A Surface layer protein; 100.0 2.1E-26 7.1E-31 232.0 33.6 268 169-497 3-278 (391)
122 2xyi_A Probable histone-bindin 100.0 1.8E-27 6.3E-32 243.5 24.7 256 103-408 122-411 (430)
123 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-26 3.8E-31 230.2 23.8 225 137-409 53-294 (343)
124 2w18_A PALB2, fancn, partner a 99.9 2.1E-26 7.3E-31 221.3 24.2 257 88-405 62-355 (356)
125 2w18_A PALB2, fancn, partner a 99.9 1.3E-25 4.5E-30 215.9 29.6 188 289-492 143-355 (356)
126 3bws_A Protein LP49; two-domai 99.9 7.1E-26 2.4E-30 231.4 29.5 274 210-525 122-425 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.2E-23 7.4E-28 212.1 28.6 286 169-515 76-411 (415)
128 1nir_A Nitrite reductase; hemo 99.9 8.7E-23 3E-27 214.3 32.9 298 165-521 146-498 (543)
129 2ecf_A Dipeptidyl peptidase IV 99.9 1.8E-22 6E-27 220.9 31.5 262 212-521 110-444 (741)
130 1nir_A Nitrite reductase; hemo 99.9 1.7E-21 5.8E-26 204.5 34.2 313 141-515 158-533 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.5E-21 8.4E-26 196.9 33.0 245 168-476 143-408 (415)
132 1k32_A Tricorn protease; prote 99.9 6.1E-22 2.1E-26 224.6 28.7 369 91-522 185-628 (1045)
133 3u4y_A Uncharacterized protein 99.9 2E-20 6.8E-25 183.7 32.3 290 169-514 11-327 (331)
134 1xfd_A DIP, dipeptidyl aminope 99.9 1.2E-21 4.2E-26 213.5 25.9 300 165-520 25-428 (723)
135 2z3z_A Dipeptidyl aminopeptida 99.9 9E-21 3.1E-25 206.2 32.3 261 211-521 82-420 (706)
136 3vgz_A Uncharacterized protein 99.9 2.5E-20 8.6E-25 184.4 32.2 258 166-523 50-335 (353)
137 1k32_A Tricorn protease; prote 99.9 4.7E-21 1.6E-25 217.3 28.6 374 90-522 34-492 (1045)
138 1ri6_A Putative isomerase YBHE 99.9 4.7E-20 1.6E-24 181.4 30.5 294 169-515 5-336 (343)
139 2ojh_A Uncharacterized protein 99.9 7.7E-21 2.6E-25 182.4 23.2 246 175-522 19-292 (297)
140 2oit_A Nucleoporin 214KDA; NH2 99.9 2.9E-20 9.9E-25 189.8 22.8 220 209-495 35-279 (434)
141 3u4y_A Uncharacterized protein 99.9 2.2E-19 7.5E-24 176.2 27.7 261 216-522 3-293 (331)
142 2ecf_A Dipeptidyl peptidase IV 99.8 3.2E-20 1.1E-24 202.9 21.5 288 210-520 36-398 (741)
143 2oit_A Nucleoporin 214KDA; NH2 99.8 1.1E-19 3.6E-24 185.7 23.3 213 165-408 45-279 (434)
144 3vgz_A Uncharacterized protein 99.8 5.1E-18 1.7E-22 167.7 31.5 228 141-415 68-311 (353)
145 2ojh_A Uncharacterized protein 99.8 4.7E-19 1.6E-23 169.9 23.2 219 139-410 19-261 (297)
146 1pby_B Quinohemoprotein amine 99.8 1.2E-18 4.1E-23 170.8 26.0 265 169-497 2-313 (337)
147 1pby_B Quinohemoprotein amine 99.8 4.8E-18 1.6E-22 166.5 29.0 257 225-525 3-303 (337)
148 2z3z_A Dipeptidyl aminopeptida 99.8 1.4E-18 4.9E-23 188.8 27.6 284 110-496 82-437 (706)
149 1xfd_A DIP, dipeptidyl aminope 99.8 9.6E-20 3.3E-24 198.5 17.6 262 212-521 18-379 (723)
150 3hfq_A Uncharacterized protein 99.8 7.4E-18 2.5E-22 166.6 29.4 243 209-493 38-316 (347)
151 1ri6_A Putative isomerase YBHE 99.8 1.4E-17 4.8E-22 163.6 30.3 283 140-475 13-332 (343)
152 1z68_A Fibroblast activation p 99.8 1.1E-18 3.8E-23 190.1 21.5 294 165-519 24-427 (719)
153 3o4h_A Acylamino-acid-releasin 99.8 2E-18 6.8E-23 183.4 21.7 248 165-522 30-302 (582)
154 3scy_A Hypothetical bacterial 99.8 2.7E-16 9.1E-21 156.4 29.5 271 168-493 13-336 (361)
155 3hfq_A Uncharacterized protein 99.8 2E-16 6.7E-21 156.3 27.5 256 105-411 35-323 (347)
156 1z68_A Fibroblast activation p 99.8 1.1E-17 3.9E-22 182.1 20.2 282 165-496 68-445 (719)
157 1jmx_B Amine dehydrogenase; ox 99.8 3.9E-17 1.3E-21 160.9 21.1 158 215-416 4-184 (349)
158 3o4h_A Acylamino-acid-releasin 99.7 8.8E-17 3E-21 170.7 22.5 152 213-410 112-277 (582)
159 1jmx_B Amine dehydrogenase; ox 99.7 9.4E-16 3.2E-20 151.0 26.6 232 135-416 14-334 (349)
160 3scy_A Hypothetical bacterial 99.7 6.4E-15 2.2E-19 146.3 32.5 268 165-474 58-360 (361)
161 1jof_A Carboxy-CIS,CIS-muconat 99.7 6.5E-16 2.2E-20 154.0 25.1 267 170-522 4-330 (365)
162 4a5s_A Dipeptidyl peptidase 4 99.7 3E-15 1E-19 163.4 30.7 299 165-520 25-434 (740)
163 2oiz_A Aromatic amine dehydrog 99.7 6.8E-15 2.3E-19 146.3 26.5 284 166-515 13-361 (361)
164 3pe7_A Oligogalacturonate lyas 99.7 7.9E-15 2.7E-19 146.9 26.3 274 165-493 44-381 (388)
165 1jof_A Carboxy-CIS,CIS-muconat 99.7 5.9E-15 2E-19 147.0 24.3 241 165-495 48-342 (365)
166 3fvz_A Peptidyl-glycine alpha- 99.7 2.1E-14 7.3E-19 140.8 27.4 246 209-496 22-324 (329)
167 4a5s_A Dipeptidyl peptidase 4 99.7 1.3E-15 4.4E-20 166.4 17.3 263 211-519 17-380 (740)
168 3c5m_A Oligogalacturonate lyas 99.6 9E-15 3.1E-19 146.7 20.2 211 165-411 44-277 (396)
169 1q7f_A NHL, brain tumor CG1071 99.6 4.3E-13 1.5E-17 128.4 31.0 241 209-494 28-280 (286)
170 3pe7_A Oligogalacturonate lyas 99.6 8.7E-14 3E-18 139.3 26.7 275 94-430 15-363 (388)
171 3azo_A Aminopeptidase; POP fam 99.6 1.4E-13 4.9E-18 148.1 25.0 196 279-496 129-371 (662)
172 3fvz_A Peptidyl-glycine alpha- 99.6 2.6E-13 9E-18 133.0 24.0 207 165-407 99-322 (329)
173 3c5m_A Oligogalacturonate lyas 99.6 1.3E-13 4.3E-18 138.3 22.0 253 95-410 16-332 (396)
174 3e5z_A Putative gluconolactona 99.6 6.6E-13 2.3E-17 127.9 26.1 159 209-410 26-206 (296)
175 2dg1_A DRP35, lactonase; beta 99.6 3.2E-13 1.1E-17 132.4 23.0 263 211-522 6-300 (333)
176 1q7f_A NHL, brain tumor CG1071 99.6 1.4E-12 4.8E-17 124.8 27.0 186 167-408 88-281 (286)
177 2gop_A Trilobed protease; beta 99.6 6.3E-13 2.2E-17 130.9 24.7 238 177-493 42-330 (347)
178 3azo_A Aminopeptidase; POP fam 99.6 1.4E-13 4.8E-18 148.2 21.5 262 209-519 22-352 (662)
179 2xdw_A Prolyl endopeptidase; a 99.5 4.9E-12 1.7E-16 137.4 29.2 233 165-496 133-416 (710)
180 1qks_A Cytochrome CD1 nitrite 99.5 6.4E-11 2.2E-15 124.0 35.7 297 168-521 167-522 (567)
181 1rwi_B Serine/threonine-protei 99.5 3.7E-12 1.3E-16 120.6 23.9 199 211-497 67-267 (270)
182 2gop_A Trilobed protease; beta 99.5 3.3E-12 1.1E-16 125.7 24.3 183 165-413 67-297 (347)
183 2oiz_A Aromatic amine dehydrog 99.5 7.2E-12 2.5E-16 124.4 26.7 257 165-477 58-359 (361)
184 2bkl_A Prolyl endopeptidase; m 99.5 3.6E-12 1.2E-16 138.1 26.2 222 209-519 119-380 (695)
185 3e5z_A Putative gluconolactona 99.5 2.6E-12 8.9E-17 123.7 20.7 194 166-414 37-252 (296)
186 2xdw_A Prolyl endopeptidase; a 99.5 8.4E-12 2.9E-16 135.5 27.0 220 280-519 125-397 (710)
187 1rwi_B Serine/threonine-protei 99.5 1E-11 3.5E-16 117.5 23.0 193 165-410 75-267 (270)
188 2dg1_A DRP35, lactonase; beta 99.4 3.5E-11 1.2E-15 117.7 26.7 229 209-484 43-300 (333)
189 2z2n_A Virginiamycin B lyase; 99.4 4.9E-10 1.7E-14 107.3 33.7 187 165-405 65-253 (299)
190 3no2_A Uncharacterized protein 99.4 1.3E-11 4.5E-16 117.6 22.3 193 166-416 3-204 (276)
191 3dsm_A Uncharacterized protein 99.4 3.8E-11 1.3E-15 117.5 26.2 262 176-495 15-303 (328)
192 1qks_A Cytochrome CD1 nitrite 99.4 1.9E-09 6.5E-14 112.8 40.5 310 140-498 175-542 (567)
193 3no2_A Uncharacterized protein 99.4 3.5E-11 1.2E-15 114.6 23.3 208 225-482 7-230 (276)
194 2z2n_A Virginiamycin B lyase; 99.4 8.7E-10 3E-14 105.5 32.4 261 209-520 13-284 (299)
195 1yr2_A Prolyl oligopeptidase; 99.4 5.9E-11 2E-15 129.5 27.0 222 209-519 161-424 (741)
196 2bkl_A Prolyl endopeptidase; m 99.4 1.3E-11 4.6E-16 133.6 20.7 191 165-406 129-348 (695)
197 3dsm_A Uncharacterized protein 99.4 5.9E-10 2E-14 109.0 29.8 216 281-520 45-285 (328)
198 3sjl_D Methylamine dehydrogena 99.3 5.6E-10 1.9E-14 110.0 26.7 283 166-512 42-384 (386)
199 1xip_A Nucleoporin NUP159; bet 99.3 4.3E-11 1.5E-15 118.4 17.9 167 280-518 38-230 (388)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.1E-09 3.8E-14 105.7 27.5 239 211-495 18-300 (314)
201 1xip_A Nucleoporin NUP159; bet 99.3 8.5E-11 2.9E-15 116.3 19.5 164 165-373 46-223 (388)
202 1yr2_A Prolyl oligopeptidase; 99.3 3E-10 1E-14 123.8 23.9 188 165-406 171-392 (741)
203 2mad_H Methylamine dehydrogena 99.3 9.2E-09 3.1E-13 102.2 32.4 238 215-498 70-354 (373)
204 2qc5_A Streptogramin B lactona 99.3 8.5E-09 2.9E-13 98.5 31.1 222 210-520 61-290 (300)
205 3dr2_A Exported gluconolactona 99.3 1.1E-09 3.9E-14 105.7 24.6 155 211-409 45-226 (305)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 3.3E-09 1.1E-13 102.4 27.1 192 165-407 79-299 (314)
207 2qc5_A Streptogramin B lactona 99.2 2.2E-08 7.5E-13 95.6 32.0 187 165-405 70-258 (300)
208 3g4e_A Regucalcin; six bladed 99.2 4.8E-09 1.6E-13 100.9 27.0 225 212-521 14-261 (297)
209 3g4e_A Regucalcin; six bladed 99.2 4.1E-09 1.4E-13 101.3 26.5 194 169-415 26-237 (297)
210 2mad_H Methylamine dehydrogena 99.2 2.2E-08 7.4E-13 99.5 31.8 214 284-521 70-338 (373)
211 3hrp_A Uncharacterized protein 99.2 1.1E-08 3.8E-13 103.0 26.8 156 211-408 131-299 (409)
212 3sjl_D Methylamine dehydrogena 99.2 8.4E-09 2.9E-13 101.6 24.5 260 216-521 38-351 (386)
213 2ghs_A AGR_C_1268P; regucalcin 99.1 3E-08 1E-12 96.6 27.7 222 213-521 51-291 (326)
214 3c75_H MADH, methylamine dehyd 99.1 1.2E-08 4.3E-13 102.2 24.8 248 215-513 122-424 (426)
215 2ghs_A AGR_C_1268P; regucalcin 99.1 9.2E-08 3.2E-12 93.2 29.8 188 169-412 62-264 (326)
216 3hrp_A Uncharacterized protein 99.1 4.2E-08 1.4E-12 98.8 27.3 230 129-405 129-408 (409)
217 3q7m_A Lipoprotein YFGL, BAMB; 99.1 2.7E-07 9.2E-12 91.6 32.1 291 139-492 60-376 (376)
218 1yiq_A Quinohemoprotein alcoho 99.1 4.8E-08 1.7E-12 105.0 27.8 302 139-476 77-528 (689)
219 3q7m_A Lipoprotein YFGL, BAMB; 99.1 1.1E-07 3.7E-12 94.5 27.7 248 225-526 105-372 (376)
220 3hxj_A Pyrrolo-quinoline quino 99.0 3E-08 1E-12 96.3 22.8 216 225-496 109-326 (330)
221 3iuj_A Prolyl endopeptidase; h 99.0 1.9E-08 6.4E-13 108.7 23.1 239 209-496 127-407 (693)
222 3c75_H MADH, methylamine dehyd 99.0 1.6E-08 5.6E-13 101.3 20.7 252 220-521 82-390 (426)
223 1kb0_A Quinohemoprotein alcoho 99.0 1.8E-07 6.1E-12 100.4 29.3 325 138-494 83-567 (677)
224 3dr2_A Exported gluconolactona 99.0 3.4E-08 1.2E-12 95.2 21.2 193 166-414 54-273 (305)
225 1yiq_A Quinohemoprotein alcoho 99.0 2.5E-07 8.4E-12 99.5 28.7 310 167-519 69-535 (689)
226 1fwx_A Nitrous oxide reductase 99.0 6.8E-08 2.3E-12 99.2 22.0 227 220-522 99-408 (595)
227 2qe8_A Uncharacterized protein 98.9 9.9E-08 3.4E-12 93.7 22.1 242 211-522 17-311 (343)
228 3iuj_A Prolyl endopeptidase; h 98.9 8.4E-08 2.9E-12 103.6 23.4 225 137-411 135-409 (693)
229 2hz6_A Endoplasmic reticulum t 98.9 1.1E-10 3.7E-15 116.2 0.3 195 167-417 8-202 (369)
230 2ece_A 462AA long hypothetical 98.9 2.1E-07 7.1E-12 92.4 23.1 245 214-520 85-399 (462)
231 3hxj_A Pyrrolo-quinoline quino 98.9 3E-08 1E-12 96.3 16.5 206 291-525 107-317 (330)
232 2qe8_A Uncharacterized protein 98.9 2.1E-07 7.2E-12 91.3 22.1 168 208-409 64-280 (343)
233 1npe_A Nidogen, entactin; glyc 98.9 8.3E-06 2.8E-10 76.6 32.3 253 169-515 2-264 (267)
234 2hz6_A Endoplasmic reticulum t 98.9 5.4E-10 1.9E-14 111.1 2.9 205 221-477 8-215 (369)
235 1mda_H Methylamine dehydrogena 98.8 2.3E-07 7.8E-12 91.4 18.3 83 327-422 269-361 (368)
236 1kb0_A Quinohemoprotein alcoho 98.8 7.5E-07 2.6E-11 95.5 23.6 252 135-418 131-518 (677)
237 1npe_A Nidogen, entactin; glyc 98.7 3.3E-05 1.1E-09 72.4 30.4 211 166-429 45-262 (267)
238 4a2l_A BT_4663, two-component 98.7 8.3E-05 2.8E-09 81.5 37.2 326 136-520 220-604 (795)
239 4a2l_A BT_4663, two-component 98.7 0.00012 4E-09 80.3 38.3 332 135-520 267-649 (795)
240 1kv9_A Type II quinohemoprotei 98.6 1.1E-05 3.6E-10 86.5 27.6 294 139-465 73-499 (668)
241 1mda_H Methylamine dehydrogena 98.6 8.2E-07 2.8E-11 87.4 15.6 100 225-352 34-158 (368)
242 2ece_A 462AA long hypothetical 98.6 1E-05 3.5E-10 80.3 22.3 210 166-417 93-365 (462)
243 2iwa_A Glutamine cyclotransfer 98.6 2.6E-05 8.8E-10 72.6 23.7 206 212-495 22-238 (266)
244 3v9f_A Two-component system se 98.5 0.00036 1.2E-08 76.2 36.9 320 134-496 214-570 (781)
245 1fwx_A Nitrous oxide reductase 98.5 8.1E-06 2.8E-10 83.9 21.9 211 166-430 99-400 (595)
246 2iwa_A Glutamine cyclotransfer 98.5 1.5E-05 5.2E-10 74.2 20.5 185 170-408 33-238 (266)
247 1kv9_A Type II quinohemoprotei 98.5 0.0001 3.5E-09 78.8 29.6 211 300-520 177-520 (668)
248 2ad6_A Methanol dehydrogenase 98.4 0.00014 4.8E-09 76.2 28.4 160 284-463 239-503 (571)
249 3v9f_A Two-component system se 98.4 0.0011 3.9E-08 72.2 35.3 338 135-519 167-556 (781)
250 3nol_A Glutamine cyclotransfer 98.3 6.9E-05 2.4E-09 69.0 20.7 158 213-416 45-210 (262)
251 3nok_A Glutaminyl cyclase; bet 98.3 0.0001 3.4E-09 68.0 21.3 157 212-416 56-219 (268)
252 2xe4_A Oligopeptidase B; hydro 98.3 0.00013 4.6E-09 79.2 26.2 133 212-373 175-329 (751)
253 3nol_A Glutamine cyclotransfer 98.3 6.1E-05 2.1E-09 69.4 19.1 161 170-373 54-234 (262)
254 2p4o_A Hypothetical protein; p 98.3 0.00059 2E-08 65.3 26.8 154 211-407 32-198 (306)
255 2fp8_A Strictosidine synthase; 98.2 0.00051 1.8E-08 66.2 25.4 110 281-407 186-313 (322)
256 1w6s_A Methanol dehydrogenase 98.2 0.00058 2E-08 71.6 27.2 167 284-464 245-513 (599)
257 3mbr_X Glutamine cyclotransfer 98.2 0.00074 2.5E-08 61.6 24.4 159 211-416 21-188 (243)
258 1flg_A Protein (quinoprotein e 98.2 0.002 6.7E-08 67.6 31.4 77 284-361 250-364 (582)
259 2ad6_A Methanol dehydrogenase 98.2 0.00037 1.3E-08 73.0 25.3 116 289-418 311-505 (571)
260 2fp8_A Strictosidine synthase; 98.2 0.00078 2.7E-08 64.8 26.0 174 212-407 20-216 (322)
261 1w6s_A Methanol dehydrogenase 98.2 0.0016 5.3E-08 68.4 29.7 108 299-416 180-351 (599)
262 3nok_A Glutaminyl cyclase; bet 98.2 6.3E-05 2.2E-09 69.3 16.5 116 281-416 56-173 (268)
263 1k3i_A Galactose oxidase precu 98.1 0.00011 3.6E-09 78.7 20.1 154 167-355 197-381 (656)
264 1flg_A Protein (quinoprotein e 98.1 0.0036 1.2E-07 65.5 30.4 65 343-417 291-365 (582)
265 3mbr_X Glutamine cyclotransfer 98.1 0.00091 3.1E-08 61.0 21.6 118 280-416 21-142 (243)
266 3v65_B Low-density lipoprotein 98.1 0.0052 1.8E-07 60.8 29.2 159 211-407 116-277 (386)
267 3qqz_A Putative uncharacterize 98.1 0.0021 7E-08 59.4 24.1 207 210-493 26-252 (255)
268 3v64_C Agrin; beta propeller, 98.0 0.012 4.1E-07 57.3 30.7 160 211-408 73-235 (349)
269 3v65_B Low-density lipoprotein 98.0 0.0021 7.1E-08 63.7 25.5 165 212-416 160-327 (386)
270 3v64_C Agrin; beta propeller, 98.0 0.0046 1.6E-07 60.3 27.0 164 212-415 117-283 (349)
271 1ijq_A LDL receptor, low-densi 98.0 0.014 4.9E-07 55.8 31.6 165 212-416 78-247 (316)
272 1ijq_A LDL receptor, low-densi 98.0 0.015 5.1E-07 55.7 32.5 164 211-408 30-196 (316)
273 3sov_A LRP-6, low-density lipo 98.0 0.015 5.2E-07 55.7 30.4 160 212-408 36-198 (318)
274 3p5b_L Low density lipoprotein 97.9 0.022 7.7E-07 56.5 32.9 166 210-409 111-279 (400)
275 3qqz_A Putative uncharacterize 97.9 0.00076 2.6E-08 62.3 17.8 197 279-527 26-248 (255)
276 3sov_A LRP-6, low-density lipo 97.9 0.0069 2.4E-07 58.1 25.0 165 212-416 80-247 (318)
277 2xe4_A Oligopeptidase B; hydro 97.8 0.0015 5.1E-08 70.9 22.0 187 165-403 182-394 (751)
278 2p4o_A Hypothetical protein; p 97.7 0.012 4E-07 56.1 24.4 153 212-406 73-241 (306)
279 3amr_A 3-phytase; beta-propell 97.7 0.019 6.6E-07 55.1 24.8 127 280-416 128-273 (355)
280 3p5b_L Low density lipoprotein 97.6 0.059 2E-06 53.4 31.7 165 211-415 159-328 (400)
281 3tc9_A Hypothetical hydrolase; 97.6 0.0021 7.3E-08 64.6 17.5 154 212-407 138-301 (430)
282 3m0c_C LDL receptor, low-densi 97.6 0.081 2.8E-06 57.2 30.5 165 211-415 471-640 (791)
283 4hw6_A Hypothetical protein, I 97.6 0.012 4E-07 59.2 22.6 153 212-406 140-303 (433)
284 3m0c_C LDL receptor, low-densi 97.6 0.14 4.7E-06 55.4 32.3 167 210-410 423-592 (791)
285 3tc9_A Hypothetical hydrolase; 97.6 0.065 2.2E-06 53.7 27.9 72 280-351 226-300 (430)
286 4hw6_A Hypothetical protein, I 97.5 0.036 1.2E-06 55.6 25.2 154 212-406 229-432 (433)
287 1k3i_A Galactose oxidase precu 97.4 0.0081 2.8E-07 64.0 20.4 115 284-411 190-327 (656)
288 4a0p_A LRP6, LRP-6, low-densit 97.3 0.14 4.9E-06 53.8 27.7 161 212-414 81-244 (628)
289 2xzh_A Clathrin heavy chain 1; 97.2 0.13 4.3E-06 48.7 23.2 223 141-411 77-336 (365)
290 2p9w_A MAL S 1 allergenic prot 97.2 0.047 1.6E-06 51.9 19.8 115 280-407 13-168 (334)
291 2p9w_A MAL S 1 allergenic prot 97.1 0.011 3.9E-07 56.2 15.5 162 213-407 15-215 (334)
292 2xbg_A YCF48-like protein; pho 97.1 0.19 6.6E-06 48.1 29.0 106 281-404 123-231 (327)
293 1n7d_A LDL receptor, low-densi 97.1 0.0026 9.1E-08 68.1 12.0 162 212-407 407-571 (699)
294 4a0p_A LRP6, LRP-6, low-densit 97.1 0.4 1.4E-05 50.4 31.3 189 170-409 8-199 (628)
295 3s94_A LRP-6, low-density lipo 97.1 0.37 1.3E-05 50.6 27.8 163 211-410 40-205 (619)
296 1bpo_A Protein (clathrin); cla 97.1 0.23 7.9E-06 48.8 23.7 224 141-412 76-336 (494)
297 3kya_A Putative phosphatase; s 97.0 0.37 1.3E-05 48.7 27.5 71 281-351 248-340 (496)
298 2xbg_A YCF48-like protein; pho 96.9 0.19 6.4E-06 48.1 22.5 152 209-404 161-319 (327)
299 3amr_A 3-phytase; beta-propell 96.9 0.21 7.3E-06 47.8 21.7 138 225-406 42-209 (355)
300 1n7d_A LDL receptor, low-densi 96.8 0.01 3.6E-07 63.5 13.8 165 212-416 454-623 (699)
301 2ism_A Putative oxidoreductase 96.8 0.41 1.4E-05 46.3 24.7 100 280-395 31-153 (352)
302 2vpj_A Kelch-like protein 12; 96.8 0.091 3.1E-06 49.5 18.7 104 290-410 159-281 (301)
303 3s94_A LRP-6, low-density lipo 96.8 0.7 2.4E-05 48.5 34.6 164 211-414 84-250 (619)
304 3sre_A PON1, serum paraoxonase 96.7 0.19 6.7E-06 48.5 20.6 167 176-373 81-275 (355)
305 3kya_A Putative phosphatase; s 96.7 0.035 1.2E-06 56.2 15.7 156 212-407 140-341 (496)
306 2vpj_A Kelch-like protein 12; 96.5 0.32 1.1E-05 45.6 20.6 104 290-410 112-234 (301)
307 3pbp_A Nucleoporin NUP82; beta 96.4 0.14 4.8E-06 50.3 17.2 108 288-407 29-158 (452)
308 3a9g_A Putative uncharacterize 96.3 0.62 2.1E-05 45.0 21.5 105 211-340 29-153 (354)
309 3ii7_A Kelch-like protein 7; p 96.2 0.81 2.8E-05 42.9 21.1 63 290-354 101-180 (306)
310 3ii7_A Kelch-like protein 7; p 96.0 0.25 8.4E-06 46.5 16.7 104 290-410 149-275 (306)
311 2xn4_A Kelch-like protein 2; s 96.0 0.19 6.6E-06 47.2 15.9 104 290-410 155-279 (302)
312 4asc_A Kelch repeat and BTB do 95.9 1 3.5E-05 42.4 20.7 107 290-413 148-283 (315)
313 3a9g_A Putative uncharacterize 95.9 1.3 4.6E-05 42.7 24.9 101 280-395 29-153 (354)
314 2xn4_A Kelch-like protein 2; s 95.8 0.74 2.5E-05 43.1 19.1 104 290-410 108-232 (302)
315 2ism_A Putative oxidoreductase 95.8 0.94 3.2E-05 43.7 20.0 50 323-373 269-324 (352)
316 3pbp_A Nucleoporin NUP82; beta 95.7 0.76 2.6E-05 45.1 18.5 126 165-307 74-209 (452)
317 1tl2_A L10, protein (tachylect 95.6 0.11 3.7E-06 46.2 11.0 174 291-527 4-205 (236)
318 1zgk_A Kelch-like ECH-associat 95.6 0.52 1.8E-05 44.4 16.9 105 290-411 168-291 (308)
319 2g8s_A Glucose/sorbosone dehyd 95.3 2.1 7.3E-05 41.2 24.0 55 283-338 133-214 (353)
320 1tl2_A L10, protein (tachylect 95.2 0.21 7.1E-06 44.4 11.5 109 212-346 42-157 (236)
321 3sre_A PON1, serum paraoxonase 95.2 1.9 6.6E-05 41.5 19.4 161 212-407 51-252 (355)
322 2xzh_A Clathrin heavy chain 1; 94.9 2.7 9.1E-05 39.8 32.5 209 152-416 50-299 (365)
323 2woz_A Kelch repeat and BTB do 94.8 2.6 9E-05 39.6 19.9 63 290-354 158-233 (318)
324 3ott_A Two-component system se 94.6 5.8 0.0002 42.5 34.2 220 133-410 24-263 (758)
325 1zgk_A Kelch-like ECH-associat 94.6 1.4 4.9E-05 41.2 16.9 104 290-410 121-243 (308)
326 1bpo_A Protein (clathrin); cla 94.0 5.2 0.00018 39.4 34.7 208 152-415 49-297 (494)
327 1xi4_A Clathrin heavy chain; a 93.3 2.4 8.3E-05 48.1 17.2 226 141-414 76-338 (1630)
328 3ei3_A DNA damage-binding prot 92.9 15 0.00051 41.5 30.0 102 391-493 526-635 (1158)
329 3ei3_A DNA damage-binding prot 92.9 15 0.00051 41.5 37.1 78 444-523 863-946 (1158)
330 4asc_A Kelch repeat and BTB do 92.9 6.1 0.00021 36.9 20.9 103 290-409 98-223 (315)
331 1cru_A Protein (soluble quinop 92.7 8.9 0.0003 38.3 20.6 111 212-341 28-163 (454)
332 2uvk_A YJHT; unknown function, 92.5 4 0.00014 39.0 16.2 56 344-414 286-349 (357)
333 1xi4_A Clathrin heavy chain; a 91.9 21 0.00072 40.8 24.0 211 152-414 49-296 (1630)
334 3ott_A Two-component system se 90.9 19 0.00065 38.4 35.3 243 210-496 323-588 (758)
335 2be1_A Serine/threonine-protei 90.5 0.49 1.7E-05 45.3 6.9 118 292-417 11-140 (339)
336 4gq2_M Nucleoporin NUP120; bet 90.4 14 0.00048 40.7 19.5 38 280-317 236-273 (950)
337 3das_A Putative oxidoreductase 90.0 14 0.00046 35.4 26.4 50 323-373 264-317 (347)
338 3s25_A Hypothetical 7-bladed b 89.9 13 0.00043 34.8 20.4 70 285-359 109-183 (302)
339 3s25_A Hypothetical 7-bladed b 89.9 13 0.00043 34.8 21.9 66 285-354 150-218 (302)
340 2zwa_A Leucine carboxyl methyl 89.7 16 0.00054 38.7 18.7 109 289-411 499-639 (695)
341 1cru_A Protein (soluble quinop 89.4 6.8 0.00023 39.1 14.7 103 280-395 27-162 (454)
342 2woz_A Kelch repeat and BTB do 88.9 15 0.00051 34.2 17.4 103 290-409 109-233 (318)
343 2g8s_A Glucose/sorbosone dehyd 88.9 6.3 0.00022 37.8 13.7 103 280-396 18-149 (353)
344 3das_A Putative oxidoreductase 85.3 26 0.0009 33.3 25.7 104 279-395 31-158 (347)
345 2wg3_C Hedgehog-interacting pr 83.9 36 0.0012 33.8 25.0 30 212-241 15-44 (463)
346 2be1_A Serine/threonine-protei 83.3 6.6 0.00023 37.4 10.2 120 334-463 11-139 (339)
347 3sbq_A Nitrous-oxide reductase 82.4 6.9 0.00023 39.8 10.1 116 212-341 324-454 (638)
348 2zwa_A Leucine carboxyl methyl 79.1 22 0.00074 37.7 13.6 156 167-355 451-638 (695)
349 2wg3_C Hedgehog-interacting pr 79.0 23 0.0008 35.3 13.0 106 280-398 14-160 (463)
350 3sbq_A Nitrous-oxide reductase 78.3 11 0.00038 38.4 10.1 72 323-408 324-409 (638)
351 3qhy_B Beta-lactamase inhibito 76.3 46 0.0016 30.4 15.8 174 167-406 72-245 (282)
352 4fhn_B Nucleoporin NUP120; pro 76.2 11 0.00038 42.5 10.8 38 280-317 238-275 (1139)
353 4gq2_M Nucleoporin NUP120; bet 68.4 25 0.00087 38.7 11.1 38 323-360 237-274 (950)
354 3qhy_B Beta-lactamase inhibito 60.7 1E+02 0.0034 28.1 21.0 166 177-406 41-206 (282)
355 3q6k_A 43.2 kDa salivary prote 60.5 1.2E+02 0.0042 29.1 26.7 214 132-373 88-333 (381)
356 2uvk_A YJHT; unknown function, 60.0 1.1E+02 0.0038 28.5 22.7 52 290-342 65-128 (357)
357 4fhn_B Nucleoporin NUP120; pro 55.0 37 0.0013 38.2 9.5 38 323-360 239-276 (1139)
358 3b7f_A Glycosyl hydrolase, BNR 53.0 1.6E+02 0.0054 28.0 18.5 27 280-306 115-143 (394)
359 3f7f_A Nucleoporin NUP120; nuc 48.1 58 0.002 34.2 8.8 37 280-318 222-258 (729)
360 4a9v_A PHOX; hydrolase, beta-p 43.7 91 0.0031 31.9 9.2 61 280-340 476-549 (592)
361 3zwu_A Alkaline phosphatase PH 42.2 70 0.0024 32.9 8.3 59 281-339 477-548 (592)
362 3f7f_A Nucleoporin NUP120; nuc 42.2 29 0.00098 36.5 5.4 28 389-416 232-259 (729)
363 4hvt_A Ritya.17583.B, post-pro 40.4 3.5E+02 0.012 28.4 23.8 68 328-409 295-383 (711)
364 1suu_A DNA gyrase subunit A; t 35.3 2.7E+02 0.0092 25.7 24.4 206 166-407 6-231 (312)
365 2zux_A YESW protein; beta-prop 26.5 5.2E+02 0.018 26.2 20.8 45 361-416 361-409 (591)
366 3b7f_A Glycosyl hydrolase, BNR 24.3 4.5E+02 0.015 24.7 14.9 47 325-372 344-391 (394)
367 3zwu_A Alkaline phosphatase PH 24.3 1.8E+02 0.0063 29.8 7.9 49 325-373 479-540 (592)
368 1b1v_A PSP1, protein (plasmato 20.4 43 0.0015 17.6 1.1 11 25-35 10-20 (26)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.2e-43 Score=378.14 Aligned_cols=372 Identities=15% Similarity=0.195 Sum_probs=291.4
Q ss_pred hhhhhcCCCCCceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCC--CcEEEEeCCCCCCC--
Q 009715 89 AAAKLLGTGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVG--DAIFISDLNSQDKD-- 164 (528)
Q Consensus 89 ~~~~~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~--~~i~v~~~~~~~~~-- 164 (528)
...++|+..++.....|.||.+.|++++|+| ++.++++++. |+.+.+|+.. .......+......
T Consensus 39 ~~v~l~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~lasg~~----------d~~v~lWd~~~~~~~~~~~~~~~~~~v~ 107 (611)
T 1nr0_A 39 TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSP-SGYYCASGDV----------HGNVRIWDTTQTTHILKTTIPVFSGPVK 107 (611)
T ss_dssp TEEEEEETTCSSCCEEECCCSSCEEEEEECT-TSSEEEEEET----------TSEEEEEESSSTTCCEEEEEECSSSCEE
T ss_pred CEEEEecCCCcccCeEecCCCCceEEEEECC-CCcEEEEEeC----------CCCEEEeECCCCcceeeEeecccCCceE
Confidence 4678999999988899999999999999999 7778888775 8889999864 33333333322222
Q ss_pred ----CCCCCeEEEEecC----CcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEE
Q 009715 165 ----AKDGHDLLIGLNS----GDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLY 236 (528)
Q Consensus 165 ----~~~~~~l~~g~~~----G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~ 236 (528)
+|+++.|++++.+ +.|++||..+. ......|...|++++|+|+++.+|++|+.|++|+
T Consensus 108 ~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~--------------~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~ 173 (611)
T 1nr0_A 108 DISWDSESKRIAAVGEGRERFGHVFLFDTGTS--------------NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVA 173 (611)
T ss_dssp EEEECTTSCEEEEEECCSSCSEEEEETTTCCB--------------CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEE
T ss_pred EEEECCCCCEEEEEECCCCceeEEEEeeCCCC--------------cceecCCCCCceEEEECCCCCeEEEEEeCCCeEE
Confidence 8999999988765 47888885431 1112349999999999999975699999999999
Q ss_pred EEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEee
Q 009715 237 VYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICG 316 (528)
Q Consensus 237 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~ 316 (528)
+||... .+.+..+.+|...|.+++|+||+++|++++.|+.|++||+.+++.+..
T Consensus 174 lwd~~~--------------------------~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~ 227 (611)
T 1nr0_A 174 IFEGPP--------------------------FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV 227 (611)
T ss_dssp EEETTT--------------------------BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEECCC--------------------------CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeee
Confidence 999753 134556788999999999999999999999999999999999998877
Q ss_pred ec-------ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE--------------------------------
Q 009715 317 GK-------SYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVA-------------------------------- 357 (528)
Q Consensus 317 ~~-------~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~-------------------------------- 357 (528)
+. +|.+.|.+++|+|++++|++++.|+.|++||+++++++.
T Consensus 228 ~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~ 307 (611)
T 1nr0_A 228 FEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFIN 307 (611)
T ss_dssp CBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEE
T ss_pred eccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEE
Confidence 74 799999999999999999999999999999998876543
Q ss_pred -----------EeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC--CCCC---
Q 009715 358 -----------WGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG--PLGG--- 421 (528)
Q Consensus 358 -----------~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~--~~~~--- 421 (528)
.+.+|...|++++|+| || .+|++++.|++|++||+.++++...+... ..+.
T Consensus 308 ~~~~~~~~~~~~~~gh~~~v~~l~~sp-------dg------~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~ 374 (611)
T 1nr0_A 308 FVNPELGSIDQVRYGHNKAITALSSSA-------DG------KTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 374 (611)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECT-------TS------SEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEE
T ss_pred EEeCCCCCcceEEcCCCCCEEEEEEeC-------CC------CEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEE
Confidence 3357999999999999 99 79999999999999999988765443110 0011
Q ss_pred -----------------------------------------CCeecCCCCC-----------------------------
Q 009715 422 -----------------------------------------SPTFSTGSQS----------------------------- 431 (528)
Q Consensus 422 -----------------------------------------~~~~s~~~~~----------------------------- 431 (528)
.++|++++..
T Consensus 375 ~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~v 454 (611)
T 1nr0_A 375 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCV 454 (611)
T ss_dssp ECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEE
T ss_pred ECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEE
Confidence 1112222200
Q ss_pred -cc-CCceeeeecCCCCceeeecCCCCc--eEEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCC-Ccccc---C-
Q 009715 432 -AH-WDNVCPVGTLQPAPSMRDVPKLSP--LVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPG-VAESQ---S- 500 (528)
Q Consensus 432 -~~-~d~~~~~g~~~~~~~~~d~~~~~~--~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~-~~~~~---~- 500 (528)
.. -...+..++.++.+++||+..... +.. .+|...|++|+|+||+ |++++.|++|++|++.. .+... .
T Consensus 455 a~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~ 533 (611)
T 1nr0_A 455 ALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWT 533 (611)
T ss_dssp EECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCC
T ss_pred EEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeee
Confidence 00 023467888899999999976542 333 6899999999999985 99999999999999976 33221 2
Q ss_pred CCccce--EEEccCCceEEEeeeeccc
Q 009715 501 SSSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 501 ~~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
.|...| ++|+|||++|++++.++.+
T Consensus 534 ~H~~~V~~v~fspdg~~lasgs~D~~v 560 (611)
T 1nr0_A 534 FHTAKVACVSWSPDNVRLATGSLDNSV 560 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ecccceeEEEECCCCCEEEEEECCCcE
Confidence 388888 8899999999999988764
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.3e-42 Score=368.06 Aligned_cols=372 Identities=15% Similarity=0.173 Sum_probs=284.6
Q ss_pred hhhhhhhhcCCCCCc--eeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCC
Q 009715 86 VRSAAAKLLGTGNGS--RTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDK 163 (528)
Q Consensus 86 ~~~~~~~~~~~~~g~--~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~ 163 (528)
......|+|+..++. ....+.+|.+.|.+++|+| ++.++++++.+ .+..+.++.|+.+..+. .+..+..
T Consensus 78 ~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~-dg~~l~~~~~~------~~~~~~v~~wd~~~~~~--~l~gh~~ 148 (611)
T 1nr0_A 78 DVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEG------RERFGHVFLFDTGTSNG--NLTGQAR 148 (611)
T ss_dssp ETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECT-TSCEEEEEECC------SSCSEEEEETTTCCBCB--CCCCCSS
T ss_pred eCCCCEEEeECCCCcceeeEeecccCCceEEEEECC-CCCEEEEEECC------CCceeEEEEeeCCCCcc--eecCCCC
Confidence 345678999986543 3457889999999999999 56555544420 01236778887655432 2333222
Q ss_pred C------CCCCC-eEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEE
Q 009715 164 D------AKDGH-DLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLY 236 (528)
Q Consensus 164 ~------~~~~~-~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~ 236 (528)
. +|++. .|++|+.|+.|++||.... + .......|...|++++|+|+++ +|++|+.|++|+
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~-----~-------~~~~l~~H~~~V~~v~fspdg~-~las~s~D~~i~ 215 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-----K-------FKSTFGEHTKFVHSVRYNPDGS-LFASTGGDGTIV 215 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTSCEEEEETTTB-----E-------EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEE
T ss_pred CceEEEECCCCCeEEEEEeCCCeEEEEECCCC-----e-------EeeeeccccCceEEEEECCCCC-EEEEEECCCcEE
Confidence 2 67776 5999999999999997651 1 1111224999999999999999 999999999999
Q ss_pred EEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEE-------eecCCCeEEEEECCCCCEEEEEeCCCcEEEEecC
Q 009715 237 VYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARW-------HICQGSINSIAFSTDGTYLATVGRDGYLRVFDYS 309 (528)
Q Consensus 237 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~ 309 (528)
+||+..+. .+..+ .+|.+.|.+++|+|++++|++++.|+.|++||+.
T Consensus 216 lwd~~~g~--------------------------~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~ 269 (611)
T 1nr0_A 216 LYNGVDGT--------------------------KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA 269 (611)
T ss_dssp EEETTTCC--------------------------EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEECCCCc--------------------------EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99987521 11122 1688999999999999999999999999999998
Q ss_pred CceEEe-------------------------------------------eecccCCCeEEEEEcCCCCEEEEEeCCCcEE
Q 009715 310 KEQLIC-------------------------------------------GGKSYYGALLCCAWSMDGKYILTGGEDDLVQ 346 (528)
Q Consensus 310 ~~~~~~-------------------------------------------~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~ 346 (528)
+++++. .+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~ 349 (611)
T 1nr0_A 270 TLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHIN 349 (611)
T ss_dssp TTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEE
Confidence 876543 2346888999999999999999999999999
Q ss_pred EEECCCCeEEEEe-ecC---------------------------------------------------------------
Q 009715 347 VWSMEDRKVVAWG-EGH--------------------------------------------------------------- 362 (528)
Q Consensus 347 vwd~~~~~~~~~~-~~h--------------------------------------------------------------- 362 (528)
+||+.++++...+ .+|
T Consensus 350 ~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~ 429 (611)
T 1nr0_A 350 SWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAA 429 (611)
T ss_dssp EEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEE
T ss_pred EEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEE
Confidence 9999876554332 122
Q ss_pred ------------------CCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeE--EEEeecCCCCCC
Q 009715 363 ------------------NSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEI--VVPLRRGPLGGS 422 (528)
Q Consensus 363 ------------------~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~--~~~~~~~~~~~~ 422 (528)
...+.+++|+| || .+|++++.|++|++||+..++. +....+...+..
T Consensus 430 ~~~~v~~~~~~~~~~~~~~~~v~~va~sp-------dg------~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~ 496 (611)
T 1nr0_A 430 CYKHIAIYSHGKLTEVPISYNSSCVALSN-------DK------QFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITS 496 (611)
T ss_dssp ESSEEEEEETTEEEEEECSSCEEEEEECT-------TS------CEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEE
T ss_pred eCceEEEEeCCceeeeecCCCceEEEEeC-------CC------CEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEE
Confidence 23456677777 88 7999999999999999988754 233445567788
Q ss_pred CeecCCCCCccCCceeeeecCCCCceeeecCC-CCceEE--eecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCcc
Q 009715 423 PTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPK-LSPLVA--HRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAE 497 (528)
Q Consensus 423 ~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~-~~~~~~--~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~ 497 (528)
++|++++ ..+..++.+..+++|++.. .+.+.. +.+|...|.+++|+||+ |++++.|++|++|++.....
T Consensus 497 v~fspdg------~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~ 570 (611)
T 1nr0_A 497 VAFSNNG------AFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD 570 (611)
T ss_dssp EEECTTS------SEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTS
T ss_pred EEECCCC------CEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCccc
Confidence 9999988 5678888999999999987 444433 34599999999999985 99999999999999986542
Q ss_pred ----ccCCC-ccce--EEEccCCceEEEeeeeccc
Q 009715 498 ----SQSSS-SETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 498 ----~~~~~-~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
....| ...| ++|+||++ |++++.++.+
T Consensus 571 ~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i 604 (611)
T 1nr0_A 571 HPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNI 604 (611)
T ss_dssp CCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCE
T ss_pred ccchhhccCcccCeeEEEEcCCCE-EEEecCCCCE
Confidence 23467 6777 88899999 9999888764
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.8e-40 Score=351.24 Aligned_cols=363 Identities=19% Similarity=0.291 Sum_probs=298.7
Q ss_pred hhhhhhhcCCCCCceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC--
Q 009715 87 RSAAAKLLGTGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD-- 164 (528)
Q Consensus 87 ~~~~~~~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~-- 164 (528)
.....++|+. ++.....+.+|.+.|++++|+| ++.++++++ .++.+.+|+..... +..+......
T Consensus 200 ~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~----------~d~~i~~w~~~~~~-~~~~~~~~~~v~ 266 (577)
T 2ymu_A 200 DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASAS----------DDKTVKLWNRNGQL-LQTLTGHSSSVN 266 (577)
T ss_dssp TTSEEEEECT-TSCEEEEEECCSSCEEEEEECT-TSSCEEEEE----------TTSCEEEECTTSCE-EEEECCCSSCEE
T ss_pred CCCEEEEEeC-CCcEEEEEecCCCCEEEEEECC-CCCEEEEEe----------CCCEEEEEeCCCCE-EEEEecCCCCEE
Confidence 3456788985 5677788999999999999998 555555555 37888888754432 2222222222
Q ss_pred ----CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEc
Q 009715 165 ----AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEK 240 (528)
Q Consensus 165 ----~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~ 240 (528)
++++..|++++.++.|++||...+. .. ....|...|++++|+|+++ +|++++.||.|++||+
T Consensus 267 ~v~~~~d~~~l~~~~~d~~i~~w~~~~~~-------~~------~~~~h~~~v~~~~~~~~~~-~l~t~~~d~~i~~w~~ 332 (577)
T 2ymu_A 267 GVAFRPDGQTIASASDDKTVKLWNRNGQL-------LQ------TLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNR 332 (577)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSCE-------EE------EECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEET
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEeCCCcE-------EE------EEecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeC
Confidence 7899999999999999999975421 11 1123889999999999999 9999999999999997
Q ss_pred CCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeeccc
Q 009715 241 SKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSY 320 (528)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 320 (528)
.. ..+..+..|...|.+++|+|++++|++++.|+.|++||. +++.+..+..|
T Consensus 333 ~~---------------------------~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~ 384 (577)
T 2ymu_A 333 NG---------------------------QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGH 384 (577)
T ss_dssp TS---------------------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECC
T ss_pred CC---------------------------CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCC
Confidence 63 234556778899999999999999999999999999996 47788888899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeE
Q 009715 321 YGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRL 400 (528)
Q Consensus 321 ~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i 400 (528)
...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+| |+ .+|++++.|+.|
T Consensus 385 ~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~-------d~------~~l~~~~~d~~v 450 (577)
T 2ymu_A 385 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP-------DD------QTIASASDDKTV 450 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECT-------TS------SEEEEEETTSEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECC-------CC------CEEEEEcCCCEE
Confidence 999999999999999999999999999995 5778888999999999999999 88 689999999999
Q ss_pred EEEEccCCeEEEEeec-CCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--
Q 009715 401 LLWDLEMDEIVVPLRR-GPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES-- 477 (528)
Q Consensus 401 ~lwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-- 477 (528)
++||+. ++.+..+.. ...+..++|++++ ..+..++.++.+++||. ..+.+..+.+|...|++|+|+|++
T Consensus 451 ~~w~~~-~~~~~~~~~~~~~v~~~~~spd~------~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~ 522 (577)
T 2ymu_A 451 KLWNRN-GQLLQTLTGHSSSVRGVAFSPDG------QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQT 522 (577)
T ss_dssp EEEETT-SCEEEEEECCSSCEEEEEECTTS------CEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSC
T ss_pred EEEECC-CCEEEEEcCCCCCEEEEEEcCCC------CEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCE
Confidence 999975 455555543 4566778898887 46778888999999995 677889999999999999999985
Q ss_pred EEEEECCCeEEEEeCCCCcc-ccCCCccce--EEEccCCceEEEeeeecccc
Q 009715 478 VLTVCREGHIKIWMRPGVAE-SQSSSSETV--LSTSSKDKPLLSSKVVTSSY 526 (528)
Q Consensus 478 l~t~s~Dg~i~iW~~~~~~~-~~~~~~~~v--l~~spd~~~l~s~~~~gs~~ 526 (528)
|++++.|+.|++||+++... ....|...| ++|+|||++|++++.++.++
T Consensus 523 l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~ 574 (577)
T 2ymu_A 523 IASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVK 574 (577)
T ss_dssp EEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred EEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 99999999999999876543 334788888 88999999999999887753
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.5e-39 Score=322.61 Aligned_cols=271 Identities=18% Similarity=0.218 Sum_probs=235.6
Q ss_pred CCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCC
Q 009715 166 KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGA 245 (528)
Q Consensus 166 ~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~ 245 (528)
++++.|++|+.||.|++||+.+. +.... ...|...|.+++|+|+++ +|++|+.|+.|++|++.....
T Consensus 65 ~d~~~l~s~s~Dg~v~iWd~~~~-----~~~~~-------~~~~~~~v~~~~~s~~~~-~l~s~~~d~~v~iw~~~~~~~ 131 (340)
T 1got_B 65 TDSRLLLSASQDGKLIIWDSYTT-----NKVHA-------IPLRSSWVMTCAYAPSGN-YVACGGLDNICSIYNLKTREG 131 (340)
T ss_dssp TTSSEEEEEETTTEEEEEETTTC-----CEEEE-------EECSSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTCSB
T ss_pred CCCCEEEEEeCCCcEEEEECCCC-----CcceE-------eecCCccEEEEEECCCCC-EEEEEeCCCeEEEEECccCCC
Confidence 35567888999999999998752 11111 123888999999999999 999999999999999875211
Q ss_pred CCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeE
Q 009715 246 GDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALL 325 (528)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 325 (528)
.......+.+|.+.|.++.|++++. |++++.|+.|++||+++++.+..+.+|.+.|.
T Consensus 132 ----------------------~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~ 188 (340)
T 1got_B 132 ----------------------NVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVM 188 (340)
T ss_dssp ----------------------SCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred ----------------------cceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceE
Confidence 1123456778999999999998774 89999999999999999999999999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEc
Q 009715 326 CCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDL 405 (528)
Q Consensus 326 ~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~ 405 (528)
+++|+|++++|++|+.|+.|++||+++++++..+.+|...|.+++|+| +| .+|++++.|++|++||+
T Consensus 189 ~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-------~~------~~l~s~s~d~~v~iwd~ 255 (340)
T 1got_B 189 SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP-------NG------NAFATGSDDATCRLFDL 255 (340)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-------TS------SEEEEEETTSCEEEEET
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC-------CC------CEEEEEcCCCcEEEEEC
Confidence 999999999999999999999999999999999999999999999999 88 68999999999999999
Q ss_pred cCCeEEEEeecCC---CCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEE
Q 009715 406 EMDEIVVPLRRGP---LGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLT 480 (528)
Q Consensus 406 ~~~~~~~~~~~~~---~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t 480 (528)
+.++.+..+.... .+..+.|++++ ..+..+..++.+++||+...+.+..+.+|...|.+++|+|++ |++
T Consensus 256 ~~~~~~~~~~~~~~~~~v~~~~~s~~g------~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s 329 (340)
T 1got_B 256 RADQELMTYSHDNIICGITSVSFSKSG------RLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVAT 329 (340)
T ss_dssp TTTEEEEEECCTTCCSCEEEEEECTTS------SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred CCCcEEEEEccCCcccceEEEEECCCC------CEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEE
Confidence 9999887776533 34567788876 567889999999999999999999999999999999999985 999
Q ss_pred EECCCeEEEEe
Q 009715 481 VCREGHIKIWM 491 (528)
Q Consensus 481 ~s~Dg~i~iW~ 491 (528)
++.|+.|+|||
T Consensus 330 ~s~D~~i~iWd 340 (340)
T 1got_B 330 GSWDSFLKIWN 340 (340)
T ss_dssp EETTSCEEEEC
T ss_pred EcCCccEEecC
Confidence 99999999997
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=318.99 Aligned_cols=286 Identities=17% Similarity=0.242 Sum_probs=240.5
Q ss_pred CceeeccCCCCCCCccccCCcc---cCCcccCCCCCCcceeeeCCCccEEEEeCCCc--EEEEeCCCCCCC------CCC
Q 009715 99 GSRTLGFGGGNGGSKSISGSSR---IGSLGASSSSTSMTNTNFDGKGTYIIFNVGDA--IFISDLNSQDKD------AKD 167 (528)
Q Consensus 99 g~~~~sf~gh~~~v~~v~~s~~---~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~--i~v~~~~~~~~~------~~~ 167 (528)
|.....+.+|.+.|.+|+|++. .+.++++++ .|+.+.+|+.... ...+.+..+... +++
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs----------~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~ 91 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGS----------LDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHT 91 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEE----------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSS
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEc----------CCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCC
Confidence 3444567799999999999873 234555555 4888888886543 345566655444 788
Q ss_pred CCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCC
Q 009715 168 GHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGD 247 (528)
Q Consensus 168 ~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~ 247 (528)
+..+++++.||.|++||+.+. +.... ...|...+.+++|+|+++ +|++++.||.|++|++...
T Consensus 92 ~~~l~s~s~D~~i~lWd~~~~-----~~~~~-------~~~~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~---- 154 (321)
T 3ow8_A 92 LPIAASSSLDAHIRLWDLENG-----KQIKS-------IDAGPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESG---- 154 (321)
T ss_dssp SSEEEEEETTSEEEEEETTTT-----EEEEE-------EECCTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTC----
T ss_pred CCEEEEEeCCCcEEEEECCCC-----CEEEE-------EeCCCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCC----
Confidence 999999999999999999762 11111 112677899999999999 9999999999999999752
Q ss_pred CccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEE
Q 009715 248 SSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCC 327 (528)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 327 (528)
.....+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+.+|...|.++
T Consensus 155 ----------------------~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l 212 (321)
T 3ow8_A 155 ----------------------KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 212 (321)
T ss_dssp ----------------------SEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEE
T ss_pred ----------------------ceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEE
Confidence 2345566677899999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC
Q 009715 328 AWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 328 ~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~ 407 (528)
+|+|++++|++|+.|+.|++||+++++++..+.+|...|.+++|+| +| .+|++++.|++|++||+++
T Consensus 213 ~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp-------~~------~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 213 TFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP-------DD------THFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp EECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-------TS------SEEEEEETTSCEEEEETTT
T ss_pred EEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC-------CC------CEEEEEeCCCcEEEEeCCC
Confidence 9999999999999999999999999999999999999999999999 88 6899999999999999998
Q ss_pred CeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEECCC
Q 009715 408 DEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCREG 485 (528)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg 485 (528)
++++..+ .+|...|.+++|+|++ |++++.|+
T Consensus 280 ~~~~~~~-----------------------------------------------~~h~~~v~~v~~s~~g~~l~s~~~d~ 312 (321)
T 3ow8_A 280 RTCVHTF-----------------------------------------------FDHQDQVWGVKYNGNGSKIVSVGDDQ 312 (321)
T ss_dssp TEEEEEE-----------------------------------------------CCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred CEEEEEE-----------------------------------------------cCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 8776544 3588999999999974 99999999
Q ss_pred eEEEEeCC
Q 009715 486 HIKIWMRP 493 (528)
Q Consensus 486 ~i~iW~~~ 493 (528)
.|++||.+
T Consensus 313 ~i~vwd~p 320 (321)
T 3ow8_A 313 EIHIYDCP 320 (321)
T ss_dssp CEEEEECC
T ss_pred eEEEEeCC
Confidence 99999975
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-39 Score=332.22 Aligned_cols=280 Identities=19% Similarity=0.314 Sum_probs=240.8
Q ss_pred eccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC------CCCCCeEEEEec
Q 009715 103 LGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD------AKDGHDLLIGLN 176 (528)
Q Consensus 103 ~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~------~~~~~~l~~g~~ 176 (528)
..+.||.+.|+++.|+| ++.++++++. ||.+.+|+......+..+..+... +++++.|++|+.
T Consensus 102 ~~l~gh~~~V~~~~~~p-~~~~l~s~s~----------Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~ 170 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHP-VFSVMVSASE----------DATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170 (410)
T ss_dssp CEEECCSSCEEEEEECS-SSSEEEEEES----------SSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EeecccCCcEEEEEEcC-CCCEEEEEeC----------CCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeC
Confidence 56789999999999999 5666666664 889999987665444444433322 789999999999
Q ss_pred CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCcccccccc
Q 009715 177 SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQ 256 (528)
Q Consensus 177 ~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~ 256 (528)
||.|++||+... + .......|...|.+++|+|+++ +|++|+.|++|++||+.+
T Consensus 171 D~~i~iwd~~~~-----~-------~~~~~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~-------------- 223 (410)
T 1vyh_C 171 DMTIKLWDFQGF-----E-------CIRTMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQT-------------- 223 (410)
T ss_dssp TSCCCEEETTSS-----C-------EEECCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTT--------------
T ss_pred CCeEEEEeCCCC-----c-------eeEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCC--------------
Confidence 999999999751 1 1112234899999999999999 999999999999999975
Q ss_pred ceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCC----
Q 009715 257 TQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMD---- 332 (528)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~---- 332 (528)
...+..+.+|...|.++.|+|++.+|++++.|+.|++||+.++++...+..|...|.+++|+|+
T Consensus 224 ------------~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 291 (410)
T 1vyh_C 224 ------------GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYS 291 (410)
T ss_dssp ------------CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGG
T ss_pred ------------CcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCccccc
Confidence 2356678889999999999999999999999999999999999999999999999999999996
Q ss_pred ----------------CCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeC
Q 009715 333 ----------------GKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQ 396 (528)
Q Consensus 333 ----------------g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~ 396 (528)
+.+|++|+.|+.|++||+++++++..+.+|..+|.+++|+| +| .+|++++.
T Consensus 292 ~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~-------~g------~~l~s~s~ 358 (410)
T 1vyh_C 292 SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-------GG------KFILSCAD 358 (410)
T ss_dssp GGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-------SS------SCEEEEET
T ss_pred chhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcC-------CC------CEEEEEeC
Confidence 67999999999999999999999999999999999999999 88 68999999
Q ss_pred CCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCC
Q 009715 397 DTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQE 476 (528)
Q Consensus 397 D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d 476 (528)
|+.|++||+.+++++. .+.+|...|++++|+|+
T Consensus 359 D~~i~vwd~~~~~~~~-----------------------------------------------~~~~h~~~v~~l~~~~~ 391 (410)
T 1vyh_C 359 DKTLRVWDYKNKRCMK-----------------------------------------------TLNAHEHFVTSLDFHKT 391 (410)
T ss_dssp TTEEEEECCTTSCCCE-----------------------------------------------EEECCSSCEEEEEECSS
T ss_pred CCeEEEEECCCCceEE-----------------------------------------------EEcCCCCcEEEEEEcCC
Confidence 9999999998765443 34568999999999998
Q ss_pred e--EEEEECCCeEEEEeC
Q 009715 477 S--VLTVCREGHIKIWMR 492 (528)
Q Consensus 477 ~--l~t~s~Dg~i~iW~~ 492 (528)
+ |++++.|++|++|++
T Consensus 392 ~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 392 APYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp SSCEEEEETTSEEEEEC-
T ss_pred CCEEEEEeCCCcEEEEeC
Confidence 4 999999999999986
No 7
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.7e-38 Score=335.97 Aligned_cols=398 Identities=19% Similarity=0.264 Sum_probs=309.8
Q ss_pred ccCceeeEEEeecccCCCCCCCCCCCCCCcccCcchhhhhhhhhcCCCCCceeeccCCCCCCCccccCCcccCCcccCCC
Q 009715 50 AHGKTVTQATLAHLKEKPAPSTPTAPPSSFSASSGVVRSAAAKLLGTGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSS 129 (528)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s 129 (528)
-|...|+.+.+..-+..-+ +| ......++|+. ++..+..|.||.+.|++++|+| ++.++++++
T Consensus 14 GH~~~V~~~a~spdg~~la--------------s~-~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fsp-dg~~las~~ 76 (577)
T 2ymu_A 14 AHSSSVRGVAFSPDGQTIA--------------SA-SDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP-DGQTIASAS 76 (577)
T ss_dssp CCSSCEEEEEECTTSSCEE--------------EE-ETTSEEEEECT-TSCEEEEEECCSSCEEEEEECT-TSSEEEEEE
T ss_pred CCCCcEEEEEECCCCCEEE--------------EE-eCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECC-CCCEEEEEe
Confidence 3556777777754322211 12 23457899994 7888899999999999999999 677777666
Q ss_pred CCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC------CCCCCeEEEEecCCcEEEEEccccccccc---cceeeee
Q 009715 130 STSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD------AKDGHDLLIGLNSGDVYSVSLRQQLQDVG---KKLVGAH 200 (528)
Q Consensus 130 ~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~---~~~~~~~ 200 (528)
. |+.+.+|+.... .+..+...... +++++.|++++.++.+++|+......... ...+...
T Consensus 77 ~----------d~~i~vWd~~~~-~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~ 145 (577)
T 2ymu_A 77 D----------DKTVKLWNRNGQ-LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGV 145 (577)
T ss_dssp T----------TSCEEEEETTSC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEE
T ss_pred C----------CCEEEEEECCCC-EEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeee
Confidence 4 788888986433 23334333322 89999999999999999999764211100 0000000
Q ss_pred eecc-------------------------CCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccc
Q 009715 201 HYNK-------------------------DGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKD 255 (528)
Q Consensus 201 ~~~~-------------------------~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~ 255 (528)
.+.. ....|...|.+++|+|+++ +|++++.||.|++||...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~w~~~~------------- 211 (577)
T 2ymu_A 146 AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNRNG------------- 211 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTTS-------------
T ss_pred eeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCC-EEEEEcCCCEEEEEeCCC-------------
Confidence 0000 1123778899999999998 899999999999998542
Q ss_pred cceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCE
Q 009715 256 QTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKY 335 (528)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~ 335 (528)
+.+..+..|...|.+++|+|++++|++++.|+.|++||.. ++.+..+.+|...|.+++|+|++++
T Consensus 212 --------------~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~ 276 (577)
T 2ymu_A 212 --------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQT 276 (577)
T ss_dssp --------------CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT-SCEEEEECCCSSCEEEEEECTTSSE
T ss_pred --------------cEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC-CCEEEEEecCCCCEEEEEEcCCCCE
Confidence 3456677889999999999999999999999999999975 6778888899999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEee
Q 009715 336 ILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLR 415 (528)
Q Consensus 336 l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 415 (528)
|++++.|+.|++||. +++.+..+.+|...|.+++|+| |+ .+|++++.|+.|++||+..........
T Consensus 277 l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~-------~~------~~l~t~~~d~~i~~w~~~~~~~~~~~~ 342 (577)
T 2ymu_A 277 IASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP-------DG------QTIASASDDKTVKLWNRNGQHLQTLTG 342 (577)
T ss_dssp EEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECT-------TS------SEEEEEETTSCEEEEETTSCEEEEECC
T ss_pred EEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECC-------CC------CEEEEEeCCCeEEEEeCCCCeeEEEeC
Confidence 999999999999996 4677888899999999999999 98 689999999999999987665443333
Q ss_pred cCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCC
Q 009715 416 RGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRP 493 (528)
Q Consensus 416 ~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~ 493 (528)
+...+..++|++++ ..+..+..++.+++|+. ..+.+..+.+|...|.+++|+|++ |++++.|+.|++|+..
T Consensus 343 ~~~~v~~~~~s~~g------~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~ 415 (577)
T 2ymu_A 343 HSSSVWGVAFSPDG------QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 415 (577)
T ss_dssp CSSCEEEEEECTTS------SEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred CCCCEEEEEECCCC------CEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 34456677888876 45678888899999995 567888899999999999999985 9999999999999987
Q ss_pred CCcc-ccCCCccce--EEEccCCceEEEeeeeccc
Q 009715 494 GVAE-SQSSSSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 494 ~~~~-~~~~~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
.... ....|...| ++|+||+++|+++..++.+
T Consensus 416 ~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v 450 (577)
T 2ymu_A 416 GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTV 450 (577)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEE
Confidence 6543 334677777 8889999999999877654
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=326.44 Aligned_cols=300 Identities=16% Similarity=0.165 Sum_probs=220.9
Q ss_pred hhhhhcCCCCCceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCc-------EE-------
Q 009715 89 AAAKLLGTGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDA-------IF------- 154 (528)
Q Consensus 89 ~~~~~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~-------i~------- 154 (528)
+++|.|+...... ..|...|.++.|+| +|.++++++.....+ -++.++.|..... ..
T Consensus 14 ~~~r~w~~~~~~~----~~~~~~v~~~~fs~-dG~~l~~~sd~~~r~----Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (344)
T 4gqb_B 14 PAAREWNLPPNAP----ACMERQLEAARYRS-DGALLLGASSLSGRC----WAGSLWLFKDPCAAPNEGFCSAGVQTEAG 84 (344)
T ss_dssp ---------CCSC----SSCCSEEEEEEECT-TSCEEEEEECCSSSC----CCEEEEEESSGGGTTCGGGCSEEEEESSC
T ss_pred ccccccCCCCCCc----ccccCCEEEEEECC-CCCEEEEEeCCceEE----eeceeeeeccccccCCcceeeeeeccCCC
Confidence 5667887765443 36777899999999 777777776422111 1233333321100 00
Q ss_pred EEeCCCCCCCCCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCce
Q 009715 155 ISDLNSQDKDAKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGN 234 (528)
Q Consensus 155 v~~~~~~~~~~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~ 234 (528)
|.++.. +++ +.|++|+.||.|++||+.+.. .... .. .....|...|++++|+|+++ +|++|+.||+
T Consensus 85 v~~~~~----s~d-~~l~~~s~dg~v~lWd~~~~~-----~~~~-~~--~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~ 150 (344)
T 4gqb_B 85 VADLTW----VGE-RGILVASDSGAVELWELDENE-----TLIV-SK--FCKYEHDDIVSTVSVLSSGT-QAVSGSKDIC 150 (344)
T ss_dssp EEEEEE----ETT-TEEEEEETTSEEEEEEECTTS-----SCEE-EE--EEEECCSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred EEEEEE----eCC-CeEEEEECCCEEEEEeccCCC-----ceeE-ee--ccccCCCCCEEEEEECCCCC-EEEEEeCCCe
Confidence 111111 344 578899999999999997621 1110 11 11123999999999999999 9999999999
Q ss_pred EEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC-CEEEEEeCCCcEEEEecCCceE
Q 009715 235 LYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG-TYLATVGRDGYLRVFDYSKEQL 313 (528)
Q Consensus 235 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg-~~l~s~~~dg~i~vwd~~~~~~ 313 (528)
|++||+.+ ...+..+.+|...|.+++|+|++ .+|++++.|+.|++||+++++.
T Consensus 151 i~iwd~~~--------------------------~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~ 204 (344)
T 4gqb_B 151 IKVWDLAQ--------------------------QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP 204 (344)
T ss_dssp EEEEETTT--------------------------TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC
T ss_pred EEEEECCC--------------------------CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce
Confidence 99999975 24567788999999999999987 5789999999999999999988
Q ss_pred Eeeec--ccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEE
Q 009715 314 ICGGK--SYYGALLCCAWSM-DGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYR 390 (528)
Q Consensus 314 ~~~~~--~~~~~v~~l~~sp-~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~ 390 (528)
+..+. .+...+.+++|+| ++++|++|+.|+.|+|||+++++++..+.+|...|++++|+| +|. .+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp-------~g~-----~~ 272 (344)
T 4gqb_B 205 ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSP-------HSV-----PF 272 (344)
T ss_dssp EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECS-------SSS-----CC
T ss_pred eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEcc-------CCC-----eE
Confidence 77664 3556789999999 457899999999999999999999999999999999999999 872 47
Q ss_pred EEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEE
Q 009715 391 FGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSG 470 (528)
Q Consensus 391 l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~ 470 (528)
|++++.|++|+|||+.+++++ .+.+|.+.|++
T Consensus 273 lasgs~D~~i~vwd~~~~~~~------------------------------------------------~~~~H~~~V~~ 304 (344)
T 4gqb_B 273 LASLSEDCSLAVLDSSLSELF------------------------------------------------RSQAHRDFVRD 304 (344)
T ss_dssp EEEEETTSCEEEECTTCCEEE------------------------------------------------EECCCSSCEEE
T ss_pred EEEEeCCCeEEEEECCCCcEE------------------------------------------------EEcCCCCCEEE
Confidence 999999999999999887643 23469999999
Q ss_pred EEEeCCe---EEEEECCCeEEEEeCCCCcc
Q 009715 471 LIFTQES---VLTVCREGHIKIWMRPGVAE 497 (528)
Q Consensus 471 l~~s~d~---l~t~s~Dg~i~iW~~~~~~~ 497 (528)
|+|+|++ |+++|.|++|++|+++.+..
T Consensus 305 v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 305 ATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred EEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 9999974 67999999999999987653
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.8e-38 Score=316.73 Aligned_cols=273 Identities=20% Similarity=0.241 Sum_probs=234.2
Q ss_pred CCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCC
Q 009715 167 DGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAG 246 (528)
Q Consensus 167 ~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~ 246 (528)
++..|++|+.||.|++||..+.. ... ....|...|.+++|+|++. +|++|+.|+.+++|++......
T Consensus 75 d~~~l~s~s~Dg~v~vWd~~~~~-----~~~-------~~~~~~~~v~~~~~sp~g~-~lasg~~d~~i~v~~~~~~~~~ 141 (354)
T 2pbi_B 75 DKRRIVSSSQDGKVIVWDSFTTN-----KEH-------AVTMPCTWVMACAYAPSGC-AIACGGLDNKCSVYPLTFDKNE 141 (354)
T ss_dssp TSSEEEEEETTSEEEEEETTTCC-----EEE-------EEECSSSCCCEEEECTTSS-EEEEESTTSEEEEEECCCCTTC
T ss_pred CCCEEEEEeCCCeEEEEECCCCC-----cce-------EEecCCCCEEEEEECCCCC-EEEEeeCCCCEEEEEEeccccc
Confidence 55677889999999999976521 111 1112778899999999999 9999999999999998753211
Q ss_pred CCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEE
Q 009715 247 DSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLC 326 (528)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~ 326 (528)
. .......+..|...|.+++|+|++..|++++.|+.|++||+++++++..+.+|...|.+
T Consensus 142 ~--------------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~ 201 (354)
T 2pbi_B 142 N--------------------MAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLC 201 (354)
T ss_dssp C--------------------SGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred c--------------------ccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEE
Confidence 0 01234566789999999999999999999999999999999999999999999999999
Q ss_pred EEEcC--CCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEE
Q 009715 327 CAWSM--DGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWD 404 (528)
Q Consensus 327 l~~sp--~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd 404 (528)
++|+| ++++|++|+.|+.|++||+++++++..+.+|...|++++|+| ++ .+|++++.|++|++||
T Consensus 202 ~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-------~~------~~l~s~s~D~~v~lwd 268 (354)
T 2pbi_B 202 LDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYP-------SG------DAFASGSDDATCRLYD 268 (354)
T ss_dssp EEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-------TS------SEEEEEETTSCEEEEE
T ss_pred EEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeC-------CC------CEEEEEeCCCeEEEEE
Confidence 99988 578999999999999999999999999999999999999999 88 6899999999999999
Q ss_pred ccCCeEEEEeecCC---CCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EE
Q 009715 405 LEMDEIVVPLRRGP---LGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VL 479 (528)
Q Consensus 405 ~~~~~~~~~~~~~~---~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~ 479 (528)
++.++.+..+.... ....+.|++++ ..+..+..++.+++||+...+.+..+.+|...|++++|+|++ |+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g------~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~ 342 (354)
T 2pbi_B 269 LRADREVAIYSKESIIFGASSVDFSLSG------RLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC 342 (354)
T ss_dssp TTTTEEEEEECCTTCCSCEEEEEECTTS------SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred CCCCcEEEEEcCCCcccceeEEEEeCCC------CEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEE
Confidence 99998877665432 23456777776 567888999999999999999999999999999999999985 99
Q ss_pred EEECCCeEEEEe
Q 009715 480 TVCREGHIKIWM 491 (528)
Q Consensus 480 t~s~Dg~i~iW~ 491 (528)
+++.|++|+||+
T Consensus 343 sgs~D~~v~vW~ 354 (354)
T 2pbi_B 343 SGSWDHTLRVWA 354 (354)
T ss_dssp EEETTSEEEEEC
T ss_pred EEcCCCCEEecC
Confidence 999999999996
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.9e-39 Score=326.32 Aligned_cols=278 Identities=17% Similarity=0.243 Sum_probs=247.4
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|..+|++++|+|++. +|++|+.||+|+|||+.+. ..+..+.+|...|.+++|
T Consensus 106 gh~~~V~~~~~~p~~~-~l~s~s~Dg~i~vwd~~~~--------------------------~~~~~l~~h~~~V~~v~~ 158 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETG--------------------------DFERTLKGHTDSVQDISF 158 (410)
T ss_dssp CCSSCEEEEEECSSSS-EEEEEESSSCEEEEETTTC--------------------------CCCEEECCCSSCEEEEEE
T ss_pred ccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC--------------------------cEEEEEeccCCcEEEEEE
Confidence 4999999999999999 9999999999999998752 345677889999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeE
Q 009715 288 STDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVS 367 (528)
Q Consensus 288 spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~ 367 (528)
+|++++|++|+.|+.|++||+.+++++..+.+|...|.+++|+|++++|++|+.|+.|++||+++++++..+.+|...|.
T Consensus 159 ~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~ 238 (410)
T 1vyh_C 159 DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 238 (410)
T ss_dssp CTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC-CCCCCCeecCCCCCc--------------
Q 009715 368 GVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG-PLGGSPTFSTGSQSA-------------- 432 (528)
Q Consensus 368 ~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~~-------------- 432 (528)
++.|+| +| .+|++++.|+.|++||++++++...+..+ ..+.++.|+++....
T Consensus 239 ~~~~~~-------~g------~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (410)
T 1vyh_C 239 MVRPNQ-------DG------TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSG 305 (410)
T ss_dssp EEEECT-------TS------SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-----
T ss_pred EEEECC-------CC------CEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccC
Confidence 999999 98 69999999999999999999988887543 455667777754310
Q ss_pred cCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCcc--ccCCCccce--
Q 009715 433 HWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAE--SQSSSSETV-- 506 (528)
Q Consensus 433 ~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~--~~~~~~~~v-- 506 (528)
.....+..++.++.+++||+...+++..+.+|...|.+++|+|++ |++++.|+.|++||+..... ....|...|
T Consensus 306 ~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~ 385 (410)
T 1vyh_C 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385 (410)
T ss_dssp --CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEE
Confidence 013467889999999999999999999999999999999999974 99999999999999977653 334677777
Q ss_pred EEEccCCceEEEeeeeccc
Q 009715 507 LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 507 l~~spd~~~l~s~~~~gs~ 525 (528)
++|+|++++|++++.+|.+
T Consensus 386 l~~~~~~~~l~sgs~D~~i 404 (410)
T 1vyh_C 386 LDFHKTAPYVVTGSVDQTV 404 (410)
T ss_dssp EEECSSSSCEEEEETTSEE
T ss_pred EEEcCCCCEEEEEeCCCcE
Confidence 8889999999999988765
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.7e-38 Score=309.93 Aligned_cols=274 Identities=16% Similarity=0.199 Sum_probs=233.0
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|...|++++|+|+++ +|++++.||+|++||+.+ ...+..+..|...|.+++|
T Consensus 11 ~h~~~V~~~~fsp~~~-~l~s~~~dg~v~lWd~~~--------------------------~~~~~~~~~~~~~v~~~~~ 63 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEP-WVLTTLYSGRVELWNYET--------------------------QVEVRSIQVTETPVRAGKF 63 (304)
T ss_dssp EECSCEEEEEECSSSS-EEEEEETTSEEEEEETTT--------------------------TEEEEEEECCSSCEEEEEE
T ss_pred CCCCceEEEEECCCCC-EEEEEcCCCcEEEEECCC--------------------------CceeEEeeccCCcEEEEEE
Confidence 4999999999999999 999999999999999975 2345677888999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC-eEEEEeecCCCCe
Q 009715 288 STDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDR-KVVAWGEGHNSWV 366 (528)
Q Consensus 288 spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~-~~~~~~~~h~~~V 366 (528)
+|++++|++++.|+.|++||+.+++.+..+.+|.+.|.+++|+|++++|++|+.|+.|++||++++ .+...+.+|...|
T Consensus 64 ~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v 143 (304)
T 2ynn_A 64 IARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV 143 (304)
T ss_dssp EGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCE
T ss_pred eCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcE
Confidence 999999999999999999999999999999999999999999999999999999999999999887 5567788999999
Q ss_pred EEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCC--CCCCCeecCCCCCccCCceeeeecCC
Q 009715 367 SGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGP--LGGSPTFSTGSQSAHWDNVCPVGTLQ 444 (528)
Q Consensus 367 ~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~d~~~~~g~~~ 444 (528)
.+++|+|. ++ .+|++++.|++|++||++.......+.... .+..+.+.+.. -...+..++.+
T Consensus 144 ~~v~~~p~------~~------~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~l~s~s~D 207 (304)
T 2ynn_A 144 MCVAFNPK------DP------STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLP----DKPYMITASDD 207 (304)
T ss_dssp EEEEECTT------CT------TEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCST----TCCEEEEEETT
T ss_pred EEEEECCC------CC------CEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcC----CCCEEEEEcCC
Confidence 99999982 34 589999999999999998877666554322 22334443321 12467889999
Q ss_pred CCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCccc--cCCCccce--EEEccCCc--eE
Q 009715 445 PAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAES--QSSSSETV--LSTSSKDK--PL 516 (528)
Q Consensus 445 ~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~--~~~~~~~v--l~~spd~~--~l 516 (528)
+.+++||++..+++..+.+|...|.+++|+|+. |++++.||+|++||+.+.+.. ...+.+.+ ++++|+++ +|
T Consensus 208 ~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (304)
T 2ynn_A 208 LTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYI 287 (304)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCE
T ss_pred CeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEE
Confidence 999999999999999999999999999999975 999999999999999876633 23455566 77788885 58
Q ss_pred EEeeeecc
Q 009715 517 LSSKVVTS 524 (528)
Q Consensus 517 ~s~~~~gs 524 (528)
++|..+|.
T Consensus 288 asg~~~g~ 295 (304)
T 2ynn_A 288 ASGFDNGF 295 (304)
T ss_dssp EEEETTEE
T ss_pred EEecCCce
Confidence 88876653
No 12
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=309.00 Aligned_cols=274 Identities=16% Similarity=0.158 Sum_probs=243.7
Q ss_pred ccCCceeEEEEeeC----CCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeE
Q 009715 208 VNNSRCTSVTWVPG----GDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSIN 283 (528)
Q Consensus 208 ~h~~~v~~l~~~p~----g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 283 (528)
.|.+.|++++|+|+ +. +|++|+.|++|+||++.... ......+.+|...|.
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~-~l~tgs~D~~v~vW~~~~~~------------------------~~~~~~l~gh~~~v~ 84 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSE-TVVTGSLDDLVKVWKWRDER------------------------LDLQWSLEGHQLGVV 84 (321)
T ss_dssp SSSSCEEEEEEC-------C-EEEEEETTSCEEEEEEETTE------------------------EEEEEEECCCSSCEE
T ss_pred cCCCcEEEEEEecCCCCCCC-EEEEEcCCCCEEEEECCCCC------------------------eeeeeeeccCCCCEE
Confidence 49999999999985 45 89999999999999986421 112345678999999
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCC
Q 009715 284 SIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHN 363 (528)
Q Consensus 284 ~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~ 363 (528)
+++|++++.++++++.|+.|++||+.+++.+..+..|...+.+++|+|++++|++++.|+.|++||+++++....+..|.
T Consensus 85 ~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~ 164 (321)
T 3ow8_A 85 SVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRG 164 (321)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSS
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCC
Confidence 99999999999999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC-CCCCCCeecCCCCCccCCceeeeec
Q 009715 364 SWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG-PLGGSPTFSTGSQSAHWDNVCPVGT 442 (528)
Q Consensus 364 ~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~d~~~~~g~ 442 (528)
..|.+++|+| || .+|++++.|+.|++||+++++.+..+... ..+..+.|++++ ..+..++
T Consensus 165 ~~v~~~~~sp-------dg------~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~------~~l~s~s 225 (321)
T 3ow8_A 165 KFILSIAYSP-------DG------KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS------QLLVTAS 225 (321)
T ss_dssp SCEEEEEECT-------TS------SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTS------CEEEEEC
T ss_pred ceEEEEEECC-------CC------CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCC------CEEEEEc
Confidence 9999999999 99 69999999999999999999999888753 467888999887 5678899
Q ss_pred CCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCccc--cCCCccce--EEEccCCceE
Q 009715 443 LQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAES--QSSSSETV--LSTSSKDKPL 516 (528)
Q Consensus 443 ~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~--~~~~~~~v--l~~spd~~~l 516 (528)
.++.+++||++..+.+..+.+|...|.+++|+|++ |++++.|++|++||+..+... ...|...| ++|+||+++|
T Consensus 226 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l 305 (321)
T 3ow8_A 226 DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKI 305 (321)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEE
Confidence 99999999999999999999999999999999974 999999999999999877633 34678888 8889999999
Q ss_pred EEeeeeccc
Q 009715 517 LSSKVVTSS 525 (528)
Q Consensus 517 ~s~~~~gs~ 525 (528)
++++.+|.+
T Consensus 306 ~s~~~d~~i 314 (321)
T 3ow8_A 306 VSVGDDQEI 314 (321)
T ss_dssp EEEETTCCE
T ss_pred EEEeCCCeE
Confidence 999988765
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.3e-38 Score=307.71 Aligned_cols=272 Identities=16% Similarity=0.189 Sum_probs=226.3
Q ss_pred CCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCC
Q 009715 168 GHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGD 247 (528)
Q Consensus 168 ~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~ 247 (528)
++.|++|+.||.|++||+......... .......|...|++++|+|++. +|++|+.|++|++||+.+
T Consensus 30 ~~~l~s~s~D~~v~~W~~~~~~~~~~~-------~~~~~~~h~~~v~~~~~s~dg~-~l~s~s~D~~v~~wd~~~----- 96 (319)
T 3frx_A 30 PNLLLSASRDKTLISWKLTGDDQKFGV-------PVRSFKGHSHIVQDCTLTADGA-YALSASWDKTLRLWDVAT----- 96 (319)
T ss_dssp TTEEEEEETTSEEEEEEEEEETTEEEE-------EEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT-----
T ss_pred ccEEEEecCCccEEEecCCCCCccccc-------cceEEeCCcccEEEEEECCCCC-EEEEEeCCCEEEEEECCC-----
Confidence 357888899999999998652111000 1111234999999999999999 999999999999999975
Q ss_pred CccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEE
Q 009715 248 SSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCC 327 (528)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 327 (528)
.+.+..+.+|...|.+++|+|++.+|++++.|+.|++||++ ++++..+.+|...|.++
T Consensus 97 ---------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~ 154 (319)
T 3frx_A 97 ---------------------GETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQV 154 (319)
T ss_dssp ---------------------TEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEE
T ss_pred ---------------------CCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEE
Confidence 23566788899999999999999999999999999999997 56677788899999999
Q ss_pred EEcCC------CCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEE
Q 009715 328 AWSMD------GKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLL 401 (528)
Q Consensus 328 ~~sp~------g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~ 401 (528)
.|+|. +.+|++++.|+.|++||+++.+....+.+|...|.+++|+| +| .+|++++.|+.|+
T Consensus 155 ~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp-------~g------~~l~s~~~dg~i~ 221 (319)
T 3frx_A 155 RVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP-------DG------TLIASAGKDGEIM 221 (319)
T ss_dssp EECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT-------TS------SEEEEEETTCEEE
T ss_pred EEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC-------CC------CEEEEEeCCCeEE
Confidence 99985 44899999999999999999999999999999999999999 99 7999999999999
Q ss_pred EEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEee--------cCCCCeEEEEE
Q 009715 402 LWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHR--------VHTEPLSGLIF 473 (528)
Q Consensus 402 lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~--------~h~~~V~~l~~ 473 (528)
+||+++++.+..+.....+..++|++++. .+..+. +..+++|++.....+..+. .|...+.+++|
T Consensus 222 iwd~~~~~~~~~~~~~~~v~~~~~sp~~~------~la~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 294 (319)
T 3frx_A 222 LWNLAAKKAMYTLSAQDEVFSLAFSPNRY------WLAAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAW 294 (319)
T ss_dssp EEETTTTEEEEEEECCSCEEEEEECSSSS------EEEEEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEE
T ss_pred EEECCCCcEEEEecCCCcEEEEEEcCCCC------EEEEEc-CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEE
Confidence 99999999999998877888899998873 233333 3447778776655444443 35678999999
Q ss_pred eCCe--EEEEECCCeEEEEeCCC
Q 009715 474 TQES--VLTVCREGHIKIWMRPG 494 (528)
Q Consensus 474 s~d~--l~t~s~Dg~i~iW~~~~ 494 (528)
+||+ |++++.|+.|+||++.+
T Consensus 295 spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 295 SADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp CTTSSEEEEEETTSCEEEEEEEE
T ss_pred CCCCCEEEEeecCceEEEEEEee
Confidence 9985 99999999999999865
No 14
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.1e-38 Score=321.36 Aligned_cols=308 Identities=16% Similarity=0.209 Sum_probs=248.7
Q ss_pred hhhcCCCCCceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC------
Q 009715 91 AKLLGTGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD------ 164 (528)
Q Consensus 91 ~~~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~------ 164 (528)
...|..........|.||.+.|+++.|+| ++.++++++. |+.+.+|+......+..+..+...
T Consensus 48 ~~~~~~~~~~~~~~l~gH~~~V~~~~~sp-~~~~l~s~s~----------D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~ 116 (380)
T 3iz6_a 48 AVSFNPTDLVCCRTLQGHSGKVYSLDWTP-EKNWIVSASQ----------DGRLIVWNALTSQKTHAIKLHCPWVMECAF 116 (380)
T ss_dssp CCCCCCCCCEEEEEECCCSSCEEEEEECT-TSSCEEEEET----------TSEEEEEETTTTEEEEEEECCCTTCCCCEE
T ss_pred ccccccceeEEeecccccccEEEEEEEcC-CCCEEEEEeC----------CCeEEEEECCCCccceEEecCCCCEEEEEE
Confidence 33466666777788999999999999999 6777777775 899999998766544444433222
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
+++++.|++|+.|+.|++||+......... .........|...|.+++|.|++...|++|+.|++|++||+.++.
T Consensus 117 s~~g~~las~~~d~~v~iw~~~~~~~~~~~-----~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~ 191 (380)
T 3iz6_a 117 APNGQSVACGGLDSACSIFNLSSQADRDGN-----MPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ 191 (380)
T ss_dssp CTTSSEEEECCSSSCCEEEECCCCSSCCCS-----STTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC
T ss_pred CCCCCEEEEeeCCCcEEEEECCCCccccCC-----ccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc
Confidence 899999999999999999999753211110 111122345999999999999876589999999999999998632
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEE-----eecCCCeEEEEECC-CCCEEEEEeCCCcEEEEecC-CceEEeee
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARW-----HICQGSINSIAFST-DGTYLATVGRDGYLRVFDYS-KEQLICGG 317 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~h~~~v~~l~~sp-dg~~l~s~~~dg~i~vwd~~-~~~~~~~~ 317 (528)
.+..+ .+|...|.+++|++ ++++|++++.|+.|++||++ ..+.+..+
T Consensus 192 --------------------------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~ 245 (380)
T 3iz6_a 192 --------------------------RISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTY 245 (380)
T ss_dssp --------------------------EEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEE
T ss_pred --------------------------EEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEE
Confidence 12222 45788999999987 89999999999999999997 45677788
Q ss_pred cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCC-------CCeEEEEEecCCCCCCCCCCccceeEE
Q 009715 318 KSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHN-------SWVSGVAFDSYWSQPNSDGTAETVMYR 390 (528)
Q Consensus 318 ~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~-------~~V~~v~f~p~~~~~~~dg~~~~~~~~ 390 (528)
.+|.+.|.+++|+|++++|++|+.|+.|++||+++++++..+..+. ..|++++|+| +| .+
T Consensus 246 ~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-------~g------~~ 312 (380)
T 3iz6_a 246 HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI-------SG------RL 312 (380)
T ss_dssp CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS-------SS------SE
T ss_pred CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECC-------CC------CE
Confidence 8999999999999999999999999999999999999888776443 3489999999 99 69
Q ss_pred EEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEE
Q 009715 391 FGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSG 470 (528)
Q Consensus 391 l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~ 470 (528)
|++++.|+.|++||+..++.+..+.. ...+|.+.|.+
T Consensus 313 l~~g~~dg~i~vwd~~~~~~~~~~~~-------------------------------------------~~~~h~~~v~~ 349 (380)
T 3iz6_a 313 LFAGYSNGDCYVWDTLLAEMVLNLGT-------------------------------------------LQNSHEGRISC 349 (380)
T ss_dssp EEEECTTSCEEEEETTTCCEEEEECC-------------------------------------------SCSSCCCCCCE
T ss_pred EEEEECCCCEEEEECCCCceEEEEec-------------------------------------------ccCCCCCceEE
Confidence 99999999999999988877655432 01368999999
Q ss_pred EEEeCCe--EEEEECCCeEEEEeCCCCc
Q 009715 471 LIFTQES--VLTVCREGHIKIWMRPGVA 496 (528)
Q Consensus 471 l~~s~d~--l~t~s~Dg~i~iW~~~~~~ 496 (528)
++|+|++ |+||+.|++|+||++.+..
T Consensus 350 l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 350 LGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 9999985 9999999999999998654
No 15
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-37 Score=304.05 Aligned_cols=285 Identities=14% Similarity=0.136 Sum_probs=233.7
Q ss_pred eeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC------CCCCCeEEEEe
Q 009715 102 TLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD------AKDGHDLLIGL 175 (528)
Q Consensus 102 ~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~------~~~~~~l~~g~ 175 (528)
...|.||.+.|++++|+| ++.++++++. ||.+.+|+......+..+...... +++++.|++|+
T Consensus 6 ~~~~~~h~~~V~~~~fsp-~~~~l~s~~~----------dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 74 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHP-TEPWVLTTLY----------SGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS 74 (304)
T ss_dssp EEEEEEECSCEEEEEECS-SSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE
T ss_pred EEeecCCCCceEEEEECC-CCCEEEEEcC----------CCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEEC
Confidence 356899999999999999 6666666664 899999998877666655544333 78999999999
Q ss_pred cCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccc
Q 009715 176 NSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKD 255 (528)
Q Consensus 176 ~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~ 255 (528)
.||.|++||+.+. +... ....|...|++++|+|+++ +|++|+.||+|++||++..
T Consensus 75 ~d~~i~vwd~~~~-----~~~~-------~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~------------ 129 (304)
T 2ynn_A 75 DDFRIRVFNYNTG-----EKVV-------DFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENN------------ 129 (304)
T ss_dssp TTSEEEEEETTTC-----CEEE-------EEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGT------------
T ss_pred CCCEEEEEECCCC-----cEEE-------EEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCC------------
Confidence 9999999999762 1111 1123999999999999999 9999999999999998752
Q ss_pred cceeEEeccCCCCCCCeEEEeecCCCeEEEEECC-CCCEEEEEeCCCcEEEEecCCceEEeee-cccCCCeEEEEEcC--
Q 009715 256 QTQFSVAHPRYSKSNPIARWHICQGSINSIAFST-DGTYLATVGRDGYLRVFDYSKEQLICGG-KSYYGALLCCAWSM-- 331 (528)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-dg~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~v~~l~~sp-- 331 (528)
......+.+|...|.+++|+| ++.+|++++.|+.|++||+.++.....+ ..|...+..++|+|
T Consensus 130 -------------~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 196 (304)
T 2ynn_A 130 -------------WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLP 196 (304)
T ss_dssp -------------TEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCST
T ss_pred -------------cchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcC
Confidence 123456778999999999999 7899999999999999999877654444 34667899999987
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEE
Q 009715 332 DGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIV 411 (528)
Q Consensus 332 ~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~ 411 (528)
++++|++|+.|+.|++||+++++++..+.+|...|.+++|+| ++ .+|++++.|++|++||+.+++++
T Consensus 197 ~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p-------~~------~~l~s~s~Dg~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 197 DKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP-------TL------PIIISGSEDGTLKIWNSSTYKVE 263 (304)
T ss_dssp TCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-------SS------SEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC-------CC------CEEEEEcCCCeEEEEECCCCcee
Confidence 778999999999999999999999999999999999999999 88 68999999999999999988776
Q ss_pred EEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe---EEEEECCCeEE
Q 009715 412 VPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES---VLTVCREGHIK 488 (528)
Q Consensus 412 ~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~---l~t~s~Dg~i~ 488 (528)
..+. .|...+.+++|+|++ ++.++.|..+.
T Consensus 264 ~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~asg~~~g~~ 296 (304)
T 2ynn_A 264 KTLN-----------------------------------------------VGLERSWCIATHPTGRKNYIASGFDNGFT 296 (304)
T ss_dssp EEEC-----------------------------------------------CSSSSEEEEEECTTCGGGCEEEEETTEEE
T ss_pred eecc-----------------------------------------------CCCccEEEEEECCCCCceEEEEecCCceE
Confidence 5543 477889999999963 34455566688
Q ss_pred EEeCCCC
Q 009715 489 IWMRPGV 495 (528)
Q Consensus 489 iW~~~~~ 495 (528)
+|++...
T Consensus 297 ~~~~~~~ 303 (304)
T 2ynn_A 297 VLSLGND 303 (304)
T ss_dssp EEECC--
T ss_pred EEEeccC
Confidence 8887653
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.9e-38 Score=313.35 Aligned_cols=298 Identities=14% Similarity=0.204 Sum_probs=224.5
Q ss_pred EEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeC------CceEEEEEcCCCC
Q 009715 171 LLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHA------DGNLYVYEKSKDG 244 (528)
Q Consensus 171 l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~------dg~v~vwd~~~~~ 244 (528)
++.+..+.....|++... ....|...|++++|+|||+ +|++|+. |+.|++|+.....
T Consensus 19 ~~~~~g~~~~~~w~~p~~----------------~p~~H~~~V~~v~fSpDG~-~las~s~d~~~~wd~~v~~~~~~~~~ 81 (357)
T 4g56_B 19 YFQSNGSSKGSAWGRPVT----------------APACMEVQIGAVRYRRDGA-LLLAASSLSSRTWGGSIWVFKDPEGA 81 (357)
T ss_dssp -------------------------------------CCCSEEEEEEECSSSC-EEEEEECSSSSSCCEEEEEESSCC--
T ss_pred EEecCCCccccccCCCCC----------------CcccccCCEEEEEECCCCC-EEEEEcCCCCccccCeEEEEECCCCC
Confidence 344444556777876531 0113999999999999999 9999997 7889999876532
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEee----eccc
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICG----GKSY 320 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~----~~~~ 320 (528)
.. .........|...|.+++|+|++. +++++.||.|++||+.+++.+.. ..+|
T Consensus 82 ~~----------------------~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h 138 (357)
T 4g56_B 82 PN----------------------ESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEH 138 (357)
T ss_dssp -C----------------------GGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCC
T ss_pred cc----------------------eeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCC
Confidence 11 112233455778999999999975 55678899999999998876532 3468
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeE
Q 009715 321 YGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRL 400 (528)
Q Consensus 321 ~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i 400 (528)
...|.+++|+|++++|++|+.|+.|++||+++++++..+.+|...|++++|+| ++. .++++++.|++|
T Consensus 139 ~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~-------~~~-----~~~~s~~~dg~v 206 (357)
T 4g56_B 139 DDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACP-------GKD-----TIFLSCGEDGRI 206 (357)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-------TCS-----SCEEEEETTSCE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcc-------CCC-----ceeeeeccCCce
Confidence 99999999999999999999999999999999999999999999999999998 662 378999999999
Q ss_pred EEEEccCCeEEEEeecC---CCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe
Q 009715 401 LLWDLEMDEIVVPLRRG---PLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES 477 (528)
Q Consensus 401 ~lwd~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~ 477 (528)
++||+++++....+... ..+..+.|++++ ...+..+..++.+++||++..+++..+.+|...|++++|+|++
T Consensus 207 ~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~-----~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~ 281 (357)
T 4g56_B 207 LLWDTRKPKPATRIDFCASDTIPTSVTWHPEK-----DDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHS 281 (357)
T ss_dssp EECCTTSSSCBCBCCCTTCCSCEEEEEECTTS-----TTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSS
T ss_pred EEEECCCCceeeeeeeccccccccchhhhhcc-----cceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCC
Confidence 99999998877665432 234456676654 2456788999999999999999999999999999999999963
Q ss_pred ---EEEEECCCeEEEEeCCCCcc-ccCCCccce--EEEcc-CCceEEEeeeeccc
Q 009715 478 ---VLTVCREGHIKIWMRPGVAE-SQSSSSETV--LSTSS-KDKPLLSSKVVTSS 525 (528)
Q Consensus 478 ---l~t~s~Dg~i~iW~~~~~~~-~~~~~~~~v--l~~sp-d~~~l~s~~~~gs~ 525 (528)
|++++.|++|+|||+..++. ....|...| ++|+| |+++|++++.+|.+
T Consensus 282 ~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v 336 (357)
T 4g56_B 282 SPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKV 336 (357)
T ss_dssp SCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred CCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeE
Confidence 89999999999999987764 344788888 88898 89999999988765
No 17
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3e-36 Score=294.84 Aligned_cols=270 Identities=14% Similarity=0.162 Sum_probs=228.7
Q ss_pred CCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCC
Q 009715 167 DGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAG 246 (528)
Q Consensus 167 ~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~ 246 (528)
+++.|++|+.||.|++||+.... . ......|...|.+++|+|+++ +|++++.||.|++||+.+
T Consensus 34 ~~~~l~s~~~dg~i~iw~~~~~~-----~-------~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~vwd~~~---- 96 (312)
T 4ery_A 34 NGEWLASSSADKLIKIWGAYDGK-----F-------EKTISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSS---- 96 (312)
T ss_dssp TSSEEEEEETTSCEEEEETTTCC-----E-------EEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT----
T ss_pred CCCEEEEeeCCCeEEEEeCCCcc-----c-------chhhccCCCceEEEEEcCCCC-EEEEECCCCEEEEEECCC----
Confidence 45667788889999999986511 1 111123889999999999999 999999999999999975
Q ss_pred CCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEE
Q 009715 247 DSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLC 326 (528)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~ 326 (528)
.+.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+
T Consensus 97 ----------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 154 (312)
T 4ery_A 97 ----------------------GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 154 (312)
T ss_dssp ----------------------CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred ----------------------CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEE
Confidence 2456677889999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee-cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEc
Q 009715 327 CAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGE-GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDL 405 (528)
Q Consensus 327 l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~-~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~ 405 (528)
++|+|++++|++++.|+.|++||+++++.+..+. .|...+..++|+| ++ .+|++++.|+.|++||+
T Consensus 155 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-------~~------~~l~~~~~d~~i~iwd~ 221 (312)
T 4ery_A 155 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-------NG------KYILAATLDNTLKLWDY 221 (312)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT-------TS------SEEEEEETTTEEEEEET
T ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECC-------CC------CEEEEEcCCCeEEEEEC
Confidence 9999999999999999999999999998877664 4677899999999 88 68999999999999999
Q ss_pred cCCeEEEEeecCCCC-CCC--eecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEE
Q 009715 406 EMDEIVVPLRRGPLG-GSP--TFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLT 480 (528)
Q Consensus 406 ~~~~~~~~~~~~~~~-~~~--~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t 480 (528)
++++++..+...... ..+ .++.. -...+..++.++.+++||+...+.+..+.+|...|.+++|+|+. |++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 222 SKGKCLKTYTGHKNEKYCIFANFSVT-----GGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 296 (312)
T ss_dssp TTTEEEEEECSSCCSSSCCCEEEECS-----SSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred CCCcEEEEEEecCCceEEEEEEEEeC-----CCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEE
Confidence 999998887653321 111 22211 12457888999999999999999999999999999999999974 788
Q ss_pred EE--CCCeEEEEeCC
Q 009715 481 VC--REGHIKIWMRP 493 (528)
Q Consensus 481 ~s--~Dg~i~iW~~~ 493 (528)
++ .|++|++|+..
T Consensus 297 ~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 297 AALENDKTIKLWKSD 311 (312)
T ss_dssp EECTTTCCEEEEECC
T ss_pred EEccCCccEEEecCC
Confidence 87 69999999864
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=307.55 Aligned_cols=276 Identities=14% Similarity=0.153 Sum_probs=213.1
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
++||..|+.++ ++++++||............ ...........+...|.+++|+|++ .|++|+.||+|+|||+.++.
T Consensus 39 s~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~d~--~l~~~s~dg~v~lWd~~~~~ 114 (344)
T 4gqb_B 39 RSDGALLLGAS-SLSGRCWAGSLWLFKDPCAA-PNEGFCSAGVQTEAGVADLTWVGER--GILVASDSGAVELWELDENE 114 (344)
T ss_dssp CTTSCEEEEEE-CCSSSCCCEEEEEESSGGGT-TCGGGCSEEEEESSCEEEEEEETTT--EEEEEETTSEEEEEEECTTS
T ss_pred CCCCCEEEEEe-CCceEEeeceeeeecccccc-CCcceeeeeeccCCCEEEEEEeCCC--eEEEEECCCEEEEEeccCCC
Confidence 58888777665 77788887432111000000 0000001111267789999999986 58899999999999998632
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCe
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGAL 324 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v 324 (528)
.. ........+|.+.|++++|+|++++|++++.|+.|++||+++++++..+.+|.+.|
T Consensus 115 ~~----------------------~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V 172 (344)
T 4gqb_B 115 TL----------------------IVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQV 172 (344)
T ss_dssp SC----------------------EEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred ce----------------------eEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCce
Confidence 10 00112345789999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCC-EEEEEeCCCcEEEEECCCCeEEEEee--cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEE
Q 009715 325 LCCAWSMDGK-YILTGGEDDLVQVWSMEDRKVVAWGE--GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLL 401 (528)
Q Consensus 325 ~~l~~sp~g~-~l~sg~~dg~v~vwd~~~~~~~~~~~--~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~ 401 (528)
.+++|+|++. +|++++.|+.|++||+++++++..+. .|...+.+++|+| ++. .+|++++.|+.|+
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~-----~~l~sg~~dg~v~ 240 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHP-------QQS-----EVFVFGDENGTVS 240 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECS-------SCT-----TEEEEEETTSEEE
T ss_pred EEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecC-------CCC-----cceEEeccCCcEE
Confidence 9999999885 78999999999999999998887775 4666899999998 441 5789999999999
Q ss_pred EEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe---E
Q 009715 402 LWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES---V 478 (528)
Q Consensus 402 lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~---l 478 (528)
+||+++++++. .+.+|...|++++|+|++ |
T Consensus 241 ~wd~~~~~~~~-----------------------------------------------~~~~h~~~v~~v~fsp~g~~~l 273 (344)
T 4gqb_B 241 LVDTKSTSCVL-----------------------------------------------SSAVHSQCVTGLVFSPHSVPFL 273 (344)
T ss_dssp EEESCC--CCE-----------------------------------------------EEECCSSCEEEEEECSSSSCCE
T ss_pred EEECCCCcEEE-----------------------------------------------EEcCCCCCEEEEEEccCCCeEE
Confidence 99998766543 445699999999999973 8
Q ss_pred EEEECCCeEEEEeCCCCcc-ccCCCccce--EEEccCCce-EEEeeeeccc
Q 009715 479 LTVCREGHIKIWMRPGVAE-SQSSSSETV--LSTSSKDKP-LLSSKVVTSS 525 (528)
Q Consensus 479 ~t~s~Dg~i~iW~~~~~~~-~~~~~~~~v--l~~spd~~~-l~s~~~~gs~ 525 (528)
++++.|++|+|||+..++. ...+|.+.| ++|+|++++ |++++.+|++
T Consensus 274 asgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v 324 (344)
T 4gqb_B 274 ASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQV 324 (344)
T ss_dssp EEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred EEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeE
Confidence 9999999999999988764 345788888 888999976 5577777765
No 19
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1e-36 Score=302.64 Aligned_cols=277 Identities=16% Similarity=0.174 Sum_probs=221.1
Q ss_pred CCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCC
Q 009715 166 KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGA 245 (528)
Q Consensus 166 ~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~ 245 (528)
++++.|++|+.||.|++||+....... .. .........|...|++++|+|++. +|++|+.|++|++||+.+
T Consensus 37 ~d~~~l~sgs~D~~v~iWd~~~~~~~~-~~----~~~~~~l~~h~~~V~~~~~~~~~~-~l~s~s~D~~v~lwd~~~--- 107 (343)
T 2xzm_R 37 EDSPVLISGSRDKTVMIWKLYEEEQNG-YF----GIPHKALTGHNHFVSDLALSQENC-FAISSSWDKTLRLWDLRT--- 107 (343)
T ss_dssp CCCCEEEEEETTSCEEEEEECSSCCSS-BS----EEEEEEECCCSSCEEEEEECSSTT-EEEEEETTSEEEEEETTS---
T ss_pred CCCCEEEEEcCCCEEEEEECCcCCccc-cc----ccccchhccCCCceEEEEECCCCC-EEEEEcCCCcEEEEECCC---
Confidence 377889999999999999987521110 00 001111234999999999999999 999999999999999975
Q ss_pred CCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeee--cccCCC
Q 009715 246 GDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGG--KSYYGA 323 (528)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~~ 323 (528)
...+..+.+|...|.+++|+|++++|++++.|+.|++||+......... ..|...
T Consensus 108 -----------------------~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 164 (343)
T 2xzm_R 108 -----------------------GTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDW 164 (343)
T ss_dssp -----------------------SCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSC
T ss_pred -----------------------CcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCce
Confidence 2356678889999999999999999999999999999999844333222 268889
Q ss_pred eEEEEEcCCC----------CEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEE
Q 009715 324 LLCCAWSMDG----------KYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGS 393 (528)
Q Consensus 324 v~~l~~sp~g----------~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s 393 (528)
|.+++|+|++ .+|++++.|+.|++||. ..+....+.+|...|.+++|+| || .+|++
T Consensus 165 v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~-------~g------~~l~s 230 (343)
T 2xzm_R 165 VSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISP-------NG------KYIAT 230 (343)
T ss_dssp EEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECT-------TS------SEEEE
T ss_pred eeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECC-------CC------CEEEE
Confidence 9999999987 79999999999999994 5677788889999999999999 99 69999
Q ss_pred EeCCCeEEEEEcc-CCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceE--Eee--------
Q 009715 394 VGQDTRLLLWDLE-MDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLV--AHR-------- 462 (528)
Q Consensus 394 ~s~D~~i~lwd~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~--~~~-------- 462 (528)
++.|+.|++||+. .......+.....+..++|++++. .+. ...+..+++|++...+... .+.
T Consensus 231 gs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~------~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 303 (343)
T 2xzm_R 231 GGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQ------WVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAE 303 (343)
T ss_dssp EETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSC------EEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBT
T ss_pred EcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCC------EEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhh
Confidence 9999999999994 444455555555677888888762 333 3456779999987665433 333
Q ss_pred ---cCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCC
Q 009715 463 ---VHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGV 495 (528)
Q Consensus 463 ---~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~ 495 (528)
+|...|.+++|+|++ |++|+.||.|++|++.++
T Consensus 304 ~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 304 GQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp TBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred hhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 688899999999975 999999999999998653
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=301.67 Aligned_cols=280 Identities=17% Similarity=0.251 Sum_probs=223.4
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
+|+++.|++|+.||.|++||+.... ......+ ...|...|++++|+|+++ +|++|+.|++|++|++....
T Consensus 25 sp~g~~las~~~D~~i~iw~~~~~~------~~~~~~~---~~~h~~~v~~~~~sp~g~-~l~s~s~D~~v~iw~~~~~~ 94 (345)
T 3fm0_A 25 NPAGTLLASCGGDRRIRIWGTEGDS------WICKSVL---SEGHQRTVRKVAWSPCGN-YLASASFDATTCIWKKNQDD 94 (345)
T ss_dssp CTTSSCEEEEETTSCEEEEEEETTE------EEEEEEE---CSSCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECCC-
T ss_pred CCCCCEEEEEcCCCeEEEEEcCCCc------ceeeeee---ccccCCcEEEEEECCCCC-EEEEEECCCcEEEEEccCCC
Confidence 4899999999999999999987521 0000111 124999999999999999 99999999999999987421
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCc---eEEeeecccC
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKE---QLICGGKSYY 321 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~---~~~~~~~~~~ 321 (528)
...+..+.+|...|.+++|+|++++|++++.|+.|++||+.++ +++..+..|.
T Consensus 95 ------------------------~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~ 150 (345)
T 3fm0_A 95 ------------------------FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHT 150 (345)
T ss_dssp ------------------------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCC
T ss_pred ------------------------eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcC
Confidence 1245677889999999999999999999999999999999865 4566778899
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe--EEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCe
Q 009715 322 GALLCCAWSMDGKYILTGGEDDLVQVWSMEDRK--VVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTR 399 (528)
Q Consensus 322 ~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~--~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~ 399 (528)
..|.+++|+|++++|++++.|+.|++||++.++ +...+.+|...|.+++|+| +| .+|++++.|++
T Consensus 151 ~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp-------~g------~~l~s~s~D~~ 217 (345)
T 3fm0_A 151 QDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP-------SG------QRLASCSDDRT 217 (345)
T ss_dssp SCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT-------TS------SEEEEEETTSC
T ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC-------CC------CEEEEEeCCCe
Confidence 999999999999999999999999999998875 4577889999999999999 98 68999999999
Q ss_pred EEEEEccCC---------------eEEEEee--cCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCC----ce
Q 009715 400 LLLWDLEMD---------------EIVVPLR--RGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLS----PL 458 (528)
Q Consensus 400 i~lwd~~~~---------------~~~~~~~--~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~----~~ 458 (528)
|++||+... +++..+. +...+..++|++++ ..+..++.++.+++|+..... +.
T Consensus 218 v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~------~~l~s~~~d~~i~vw~~~~~~~~~~~~ 291 (345)
T 3fm0_A 218 VRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT------GALATACGDDAIRVFQEDPNSDPQQPT 291 (345)
T ss_dssp EEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT------CCEEEEETTSCEEEEEECTTSCTTSCC
T ss_pred EEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCC------CEEEEEeCCCeEEEEEeCCCCCcceee
Confidence 999997432 1222222 12234455666554 456788889999999876432 21
Q ss_pred -----EEeecCCCCeEEEEEeCC---eEEEEECCCeEEEEeCCCCcc
Q 009715 459 -----VAHRVHTEPLSGLIFTQE---SVLTVCREGHIKIWMRPGVAE 497 (528)
Q Consensus 459 -----~~~~~h~~~V~~l~~s~d---~l~t~s~Dg~i~iW~~~~~~~ 497 (528)
..+.+|...|++|+|+|+ .|++++.||+|++|++..++.
T Consensus 292 ~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 292 FSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp EEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred EEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 223579999999999996 489999999999999987653
No 21
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-36 Score=299.76 Aligned_cols=297 Identities=15% Similarity=0.148 Sum_probs=223.0
Q ss_pred CceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCc--EEEEeC-CC-CCCC------CCCC
Q 009715 99 GSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDA--IFISDL-NS-QDKD------AKDG 168 (528)
Q Consensus 99 g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~--i~v~~~-~~-~~~~------~~~~ 168 (528)
......|.||.+.|.++.|++. ++++++. |+.+.+|+.... ..+..+ .. +... +|++
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~---~las~~~----------D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 70 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG---ILATGST----------DRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT 70 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT---EEEEEES----------SSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS
T ss_pred cccceeeccCCCceeeeccCCC---EEEEEcC----------CCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC
Confidence 3455778999999999999872 5666654 889999987542 222222 11 2222 8999
Q ss_pred CeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCC
Q 009715 169 HDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDS 248 (528)
Q Consensus 169 ~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~ 248 (528)
+.|++|+.||.|++||+........ . .........|...|++++|+|+++ +|++|+.|++|++||+...+.
T Consensus 71 ~~las~s~D~~v~iw~~~~~~~~~~-~----~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~--- 141 (330)
T 2hes_X 71 SLLAAGSFDSTVSIWAKEESADRTF-E----MDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGE--- 141 (330)
T ss_dssp SEEEEEETTSCEEEEEC-------C-C----CEEEEEEC----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCC---
T ss_pred CEEEEEeCCCcEEEEEcccCcCccc-c----ceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCC---
Confidence 9999999999999999864211000 0 001111234999999999999999 999999999999999954221
Q ss_pred ccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCc--eEEeeecccCCCeEE
Q 009715 249 SFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKE--QLICGGKSYYGALLC 326 (528)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~v~~ 326 (528)
....+..+.+|...|.+++|+|++.+|++++.|+.|++||+.++ +++..+.+|.+.|.+
T Consensus 142 -------------------~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~ 202 (330)
T 2hes_X 142 -------------------EYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWS 202 (330)
T ss_dssp -------------------CCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEE
T ss_pred -------------------CeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEE
Confidence 12345667889999999999999999999999999999999766 677888999999999
Q ss_pred EEEcCC--CCEEEEEeCCCcEEEEECCCC--------eEEEEeec-CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe
Q 009715 327 CAWSMD--GKYILTGGEDDLVQVWSMEDR--------KVVAWGEG-HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG 395 (528)
Q Consensus 327 l~~sp~--g~~l~sg~~dg~v~vwd~~~~--------~~~~~~~~-h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s 395 (528)
++|+|+ +.+|++|+.|+.|++||++.+ .+...+.+ |...|.+++|++ ++ +|++++
T Consensus 203 ~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-------~~-------~l~s~~ 268 (330)
T 2hes_X 203 SDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF-------NG-------LIASVG 268 (330)
T ss_dssp EEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT-------TS-------CEEEEE
T ss_pred EEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcC-------CC-------EEEEEe
Confidence 999998 779999999999999998764 45555655 999999999998 76 799999
Q ss_pred CCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCC-CeEEEEEe
Q 009715 396 QDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTE-PLSGLIFT 474 (528)
Q Consensus 396 ~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~-~V~~l~~s 474 (528)
.|+.|++||...++..... ....+|.. .|.+++|+
T Consensus 269 ~dg~v~iw~~~~~~~~~~~--------------------------------------------~~~~~h~~~~v~~v~~~ 304 (330)
T 2hes_X 269 ADGVLAVYEEVDGEWKVFA--------------------------------------------KRALCHGVYEINVVKWL 304 (330)
T ss_dssp TTSCEEEEEEETTEEEEEE--------------------------------------------EESCTTTTSCEEEEEEC
T ss_pred CCCEEEEEEcCCCceEEEe--------------------------------------------ccccccccceEEEEEEe
Confidence 9999999998776421100 01235776 89999999
Q ss_pred C--C--eEEEEECCCeEEEEeCCC
Q 009715 475 Q--E--SVLTVCREGHIKIWMRPG 494 (528)
Q Consensus 475 ~--d--~l~t~s~Dg~i~iW~~~~ 494 (528)
| + .|++++.||+|+||++..
T Consensus 305 ~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 305 ELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp -----CCEEEEETTSEEEEEEC--
T ss_pred cCCCceEEEEecCCCcEEEEEecc
Confidence 8 4 399999999999999864
No 22
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.4e-37 Score=354.74 Aligned_cols=395 Identities=14% Similarity=0.143 Sum_probs=307.4
Q ss_pred hhhhhhhcCCCCCceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC--
Q 009715 87 RSAAAKLLGTGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD-- 164 (528)
Q Consensus 87 ~~~~~~~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~-- 164 (528)
.....++|+..++.....+.+|.+.|.+++|+| ++.++++++. ++.+.+|+......+..+..+...
T Consensus 635 ~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~----------d~~v~vwd~~~~~~~~~~~~~~~~v~ 703 (1249)
T 3sfz_A 635 ADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSS-DDSYIATCSA----------DKKVKIWDSATGKLVHTYDEHSEQVN 703 (1249)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEET----------TSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CCCeEEEEECCCCCEEEEeccCCCCEEEEEEec-CCCEEEEEeC----------CCeEEEEECCCCceEEEEcCCCCcEE
Confidence 456789999999999999999999999999999 6666666654 788999987665444444433322
Q ss_pred ----CC--CCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEE
Q 009715 165 ----AK--DGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVY 238 (528)
Q Consensus 165 ----~~--~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vw 238 (528)
++ ++..+++|+.||.|++||+++. +.. .....|...|++++|+|+++ +|++++.||.|++|
T Consensus 704 ~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~-----~~~-------~~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vw 770 (1249)
T 3sfz_A 704 CCHFTNKSNHLLLATGSNDFFLKLWDLNQK-----ECR-------NTMFGHTNSVNHCRFSPDDE-LLASCSADGTLRLW 770 (1249)
T ss_dssp EEEECSSSSCCEEEEEETTSCEEEEETTSS-----SEE-------EEECCCSSCEEEEEECSSTT-EEEEEESSSEEEEE
T ss_pred EEEEecCCCceEEEEEeCCCeEEEEECCCc-----chh-------heecCCCCCEEEEEEecCCC-EEEEEECCCeEEEE
Confidence 45 5668899999999999999862 111 11123899999999999999 99999999999999
Q ss_pred EcCCCCCCCC----------------------ccccccccceeEEecc------CCCCCCCeEEE-eecCCCeEEEEECC
Q 009715 239 EKSKDGAGDS----------------------SFPVIKDQTQFSVAHP------RYSKSNPIARW-HICQGSINSIAFST 289 (528)
Q Consensus 239 d~~~~~~~~~----------------------~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~h~~~v~~l~~sp 289 (528)
|+........ ......+...+..... .......+..+ .+|...|.+++|+|
T Consensus 771 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp 850 (1249)
T 3sfz_A 771 DVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP 850 (1249)
T ss_dssp EGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECS
T ss_pred eCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcC
Confidence 9875321000 0000011111111100 00111222222 26889999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC------------------
Q 009715 290 DGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSME------------------ 351 (528)
Q Consensus 290 dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~------------------ 351 (528)
++.++++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 851 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~ 930 (1249)
T 3sfz_A 851 YDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVF 930 (1249)
T ss_dssp STTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEE
Confidence 99999999999999999999999999999999999999999999999999999988888743
Q ss_pred -------------------------------------------------------------CCeEEEEeecCCCCeEEEE
Q 009715 352 -------------------------------------------------------------DRKVVAWGEGHNSWVSGVA 370 (528)
Q Consensus 352 -------------------------------------------------------------~~~~~~~~~~h~~~V~~v~ 370 (528)
+++.+..+.+|...|.+++
T Consensus 931 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~ 1010 (1249)
T 3sfz_A 931 QENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQ 1010 (1249)
T ss_dssp ETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEE
T ss_pred cCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEE
Confidence 2334445567899999999
Q ss_pred EecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceee
Q 009715 371 FDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMR 450 (528)
Q Consensus 371 f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~ 450 (528)
|+| || .+|++++.|+.|++||+.+++......+...+..+.++++ ..+..++.++.+++|
T Consensus 1011 ~s~-------dg------~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~-------~~l~~~~~dg~v~vw 1070 (1249)
T 3sfz_A 1011 FTA-------DG------KTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQD-------SRLLSWSFDGTVKVW 1070 (1249)
T ss_dssp ECS-------SS------SCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSS-------SEEEEEESSSEEEEE
T ss_pred ECC-------CC------CEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCC-------CcEEEEECCCcEEEE
Confidence 999 88 6899999999999999999988766555555666667664 346778889999999
Q ss_pred ecCCCCceEEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCcc--ccCCCccce--EEEccCCceEEEeeeecc
Q 009715 451 DVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAE--SQSSSSETV--LSTSSKDKPLLSSKVVTS 524 (528)
Q Consensus 451 d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~--~~~~~~~~v--l~~spd~~~l~s~~~~gs 524 (528)
|+.+.+.+..+.+|...|.+++|+|++ |++++.|+.|++||+..... ....|...| ++|+||+++|++++.+|.
T Consensus 1071 d~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~ 1150 (1249)
T 3sfz_A 1071 NVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGE 1150 (1249)
T ss_dssp ETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred ECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCE
Confidence 999999999999999999999999985 99999999999999987653 334677777 889999999999998876
Q ss_pred c
Q 009715 525 S 525 (528)
Q Consensus 525 ~ 525 (528)
+
T Consensus 1151 i 1151 (1249)
T 3sfz_A 1151 I 1151 (1249)
T ss_dssp C
T ss_pred E
Confidence 5
No 23
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.3e-36 Score=298.64 Aligned_cols=271 Identities=15% Similarity=0.233 Sum_probs=237.8
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|...|++++|+|+++ +|++|+.||+|+|||+.+ ...+..+..|...|.+++|
T Consensus 53 gH~~~v~~~~~s~d~~-~l~s~s~Dg~v~iWd~~~--------------------------~~~~~~~~~~~~~v~~~~~ 105 (340)
T 1got_B 53 GHLAKIYAMHWGTDSR-LLLSASQDGKLIIWDSYT--------------------------TNKVHAIPLRSSWVMTCAY 105 (340)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTTEEEEEETTT--------------------------CCEEEEEECSSSCEEEEEE
T ss_pred CCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCC--------------------------CCcceEeecCCccEEEEEE
Confidence 4999999999999999 999999999999999875 2345667778899999999
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCc----eEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCC
Q 009715 288 STDGTYLATVGRDGYLRVFDYSKE----QLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHN 363 (528)
Q Consensus 288 spdg~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~ 363 (528)
+|++++|++++.|+.|++||+.+. +....+.+|.+.|.++.|++++. +++++.|+.|++||+++++++..+.+|.
T Consensus 106 s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~ 184 (340)
T 1got_B 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHT 184 (340)
T ss_dssp CTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred CCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCC
Confidence 999999999999999999999865 45667788999999999999875 8899999999999999999999999999
Q ss_pred CCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC-CCCCCCeecCCCCCccCCceeeeec
Q 009715 364 SWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG-PLGGSPTFSTGSQSAHWDNVCPVGT 442 (528)
Q Consensus 364 ~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~d~~~~~g~ 442 (528)
..|.+++|+| ++ .+|++++.|+.|++||+++++++..+..+ ..+..+.|++++ ..+..++
T Consensus 185 ~~v~~~~~~~-------~~------~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~------~~l~s~s 245 (340)
T 1got_B 185 GDVMSLSLAP-------DT------RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG------NAFATGS 245 (340)
T ss_dssp SCEEEEEECT-------TS------SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTS------SEEEEEE
T ss_pred CceEEEEECC-------CC------CEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCC------CEEEEEc
Confidence 9999999999 88 68999999999999999999998888643 456778888876 5678899
Q ss_pred CCCCceeeecCCCCceEEeec--CCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCcc--ccCCCccce--EEEccCCc
Q 009715 443 LQPAPSMRDVPKLSPLVAHRV--HTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAE--SQSSSSETV--LSTSSKDK 514 (528)
Q Consensus 443 ~~~~~~~~d~~~~~~~~~~~~--h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~--~~~~~~~~v--l~~spd~~ 514 (528)
.++.+++||++..+++..+.. +...|.+++|+|++ |++++.|+.|++||+..... ...+|...| ++|+||++
T Consensus 246 ~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~ 325 (340)
T 1got_B 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGM 325 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS
T ss_pred CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCC
Confidence 999999999998887766642 33579999999985 99999999999999877653 334788888 88899999
Q ss_pred eEEEeeeeccc
Q 009715 515 PLLSSKVVTSS 525 (528)
Q Consensus 515 ~l~s~~~~gs~ 525 (528)
+|++++.+|.+
T Consensus 326 ~l~s~s~D~~i 336 (340)
T 1got_B 326 AVATGSWDSFL 336 (340)
T ss_dssp CEEEEETTSCE
T ss_pred EEEEEcCCccE
Confidence 99999988765
No 24
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.2e-37 Score=307.16 Aligned_cols=282 Identities=14% Similarity=0.175 Sum_probs=223.2
Q ss_pred CCCCCeEEEEec------CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEE
Q 009715 165 AKDGHDLLIGLN------SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVY 238 (528)
Q Consensus 165 ~~~~~~l~~g~~------~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vw 238 (528)
+|||++|++|+. ||.|++|+....... .. +......|...|++++|+|++. +++++.||+|+||
T Consensus 51 SpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~--~~------~~~~~~~~~~~V~~~~~s~d~~--~l~~s~dg~v~lW 120 (357)
T 4g56_B 51 RRDGALLLAASSLSSRTWGGSIWVFKDPEGAPN--ES------LCTAGVQTEAGVTDVAWVSEKG--ILVASDSGAVELW 120 (357)
T ss_dssp CSSSCEEEEEECSSSSSCCEEEEEESSCC---C--GG------GCSEEEECSSCEEEEEEETTTE--EEEEETTSCEEEC
T ss_pred CCCCCEEEEEcCCCCccccCeEEEEECCCCCcc--ee------EecccCCCCCCEEEEEEcCCCC--EEEEECCCEEEEe
Confidence 799999999997 678888887542111 00 1111123888999999999985 6678899999999
Q ss_pred EcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeec
Q 009715 239 EKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGK 318 (528)
Q Consensus 239 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~ 318 (528)
|+.+.... ........+|...|++++|+|++++|++++.|+.|++||+++++++..+.
T Consensus 121 d~~~~~~~----------------------~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~ 178 (357)
T 4g56_B 121 EILEKESL----------------------LVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYN 178 (357)
T ss_dssp ------------------------------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ecccccee----------------------EEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 99763211 01112345688999999999999999999999999999999999999999
Q ss_pred ccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeEEEEee--cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe
Q 009715 319 SYYGALLCCAWSMDGK-YILTGGEDDLVQVWSMEDRKVVAWGE--GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG 395 (528)
Q Consensus 319 ~~~~~v~~l~~sp~g~-~l~sg~~dg~v~vwd~~~~~~~~~~~--~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s 395 (528)
.|...|.+++|+|++. ++++++.|+.|++||+++++++..+. .|...|.+++|+| ++. .+|++++
T Consensus 179 ~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp-------~~~-----~~la~g~ 246 (357)
T 4g56_B 179 AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHP-------EKD-----DTFACGD 246 (357)
T ss_dssp CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECT-------TST-----TEEEEEE
T ss_pred CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhh-------ccc-----ceEEEee
Confidence 9999999999999875 78999999999999999988766554 5778899999999 642 5799999
Q ss_pred CCCeEEEEEccCCeEEEEeecC-CCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEe
Q 009715 396 QDTRLLLWDLEMDEIVVPLRRG-PLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFT 474 (528)
Q Consensus 396 ~D~~i~lwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s 474 (528)
.|+.|++||+++++++..+... ..+..++|++++. ..+..++.++.+++||+...+.+.. .+|.+.|++|+|+
T Consensus 247 ~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~-----~~lasgs~D~~i~iwd~~~~~~~~~-~~H~~~V~~vafs 320 (357)
T 4g56_B 247 ETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSS-----PFLASISEDCTVAVLDADFSEVFRD-LSHRDFVTGVAWS 320 (357)
T ss_dssp SSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSS-----CCEEEEETTSCEEEECTTSCEEEEE-CCCSSCEEEEEEC
T ss_pred cccceeEEECCCCcEeEEEeccceeEEEEEEcCCCC-----CEEEEEeCCCEEEEEECCCCcEeEE-CCCCCCEEEEEEe
Confidence 9999999999999988887653 4567788887652 3567888999999999998876655 4899999999999
Q ss_pred C-C--eEEEEECCCeEEEEeCCCCc
Q 009715 475 Q-E--SVLTVCREGHIKIWMRPGVA 496 (528)
Q Consensus 475 ~-d--~l~t~s~Dg~i~iW~~~~~~ 496 (528)
| + .|+|++.||+|++|+++...
T Consensus 321 P~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 321 PLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp SSSTTEEEEEETTSCEEEEECC---
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCC
Confidence 8 4 49999999999999997643
No 25
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-36 Score=337.48 Aligned_cols=404 Identities=12% Similarity=0.067 Sum_probs=271.4
Q ss_pred hhhhhhhhcCCCCCceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC-
Q 009715 86 VRSAAAKLLGTGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD- 164 (528)
Q Consensus 86 ~~~~~~~~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~- 164 (528)
......++|+...+.....+ .|.+.|++++|++ +.++++++. |+.+.+|+......+..+......
T Consensus 36 s~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp--g~~L~S~s~----------D~~v~lWd~~~~~~~~~~~~~~~V~ 102 (902)
T 2oaj_A 36 TVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK--GIYLVVINA----------KDTVYVLSLYSQKVLTTVFVPGKIT 102 (902)
T ss_dssp ETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET--TTEEEEEET----------TCEEEEEETTTCSEEEEEECSSCEE
T ss_pred eCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC--CCEEEEEEC----------cCeEEEEECCCCcEEEEEcCCCCEE
Confidence 34568899999887765544 6889999999998 555666654 899999988654333332222111
Q ss_pred ----CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeec-cCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEE
Q 009715 165 ----AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYN-KDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYE 239 (528)
Q Consensus 165 ----~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd 239 (528)
++++++|++|+.||.|++||++....... . ....... .....|..+|++++|+|++..+|++|+.||.| +||
T Consensus 103 ~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~-~-i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd 179 (902)
T 2oaj_A 103 SIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSF-K-LDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYS 179 (902)
T ss_dssp EEECCTTCSEEEEEETTSCEEEEETTTTEEEEE-E-ECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEE
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCccccc-e-eccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEE
Confidence 89999999999999999999986321000 0 0000000 12345899999999999764489999999999 999
Q ss_pred cCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEee--e
Q 009715 240 KSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICG--G 317 (528)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~--~ 317 (528)
++.. .....+..+.... .... ......+..|...|.+++|+|+|.+|++++.|+.|++||+++++++.. +
T Consensus 180 ~~~~-~~~~~~~~~~~~g------~~~~-~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l 251 (902)
T 2oaj_A 180 LVEN-EIKQSFIYELPPF------APGG-DFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTV 251 (902)
T ss_dssp TTTT-EEEEEECCCBCTT------CCCS-TTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECS
T ss_pred CCCC-ceEEEEecccCCc------CCCc-ccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEee
Confidence 9762 1111111100000 0000 000012234678899999999999999999999999999999887653 2
Q ss_pred c---c-------------cCCCeEEEEEc----CCC-CEEEEEeCCC-----cEEEEE----------------------
Q 009715 318 K---S-------------YYGALLCCAWS----MDG-KYILTGGEDD-----LVQVWS---------------------- 349 (528)
Q Consensus 318 ~---~-------------~~~~v~~l~~s----p~g-~~l~sg~~dg-----~v~vwd---------------------- 349 (528)
. . |...|.+++|+ |++ .+|++|+.|. .+++|+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~ 331 (902)
T 2oaj_A 252 FETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANP 331 (902)
T ss_dssp SCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSC
T ss_pred cccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCc
Confidence 1 1 34578999995 433 3555554431 344444
Q ss_pred -------------------------------------------------CCCCeEEEE-------eecCCCCeEEEEEec
Q 009715 350 -------------------------------------------------MEDRKVVAW-------GEGHNSWVSGVAFDS 373 (528)
Q Consensus 350 -------------------------------------------------~~~~~~~~~-------~~~h~~~V~~v~f~p 373 (528)
+.++..... +..|...|++++|++
T Consensus 332 ~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~ 411 (902)
T 2oaj_A 332 KQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAAS 411 (902)
T ss_dssp SEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEE
T ss_pred cceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEE
Confidence 433322111 122334555555532
Q ss_pred C----C---------------C--------CCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEE----EEe--------
Q 009715 374 Y----W---------------S--------QPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIV----VPL-------- 414 (528)
Q Consensus 374 ~----~---------------~--------~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~----~~~-------- 414 (528)
. | . ...+|| .+|++++.|++|++||+.+++.. ..+
T Consensus 412 ~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg------~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~ 485 (902)
T 2oaj_A 412 VPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYG------TAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNK 485 (902)
T ss_dssp EEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEE------EEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTC
T ss_pred cCHHHHHHHHhcccCCCCcccCCcCCCCcccccccC------cEEEEecCCCcEEEEECCCccccCCceEEeechhhcCC
Confidence 0 0 0 001156 79999999999999999887421 111
Q ss_pred ecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCC---------------------------------------
Q 009715 415 RRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKL--------------------------------------- 455 (528)
Q Consensus 415 ~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~--------------------------------------- 455 (528)
.+...+.+++|++++ ..++++..++.+++|++...
T Consensus 486 ~h~~~V~svafspdg------~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (902)
T 2oaj_A 486 AKELAVDKISFAAET------LELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPT 559 (902)
T ss_dssp SSSCCEEEEEEETTT------TEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCT
T ss_pred CCCCceeEEEecCCC------CeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCC
Confidence 223457788999988 57888999999999998654
Q ss_pred ------CceEEeecCCCCeEEEEEeCCe-EEEEECCCeEEEEeCCCCccc-------cC-CCccce--EEEc-----cCC
Q 009715 456 ------SPLVAHRVHTEPLSGLIFTQES-VLTVCREGHIKIWMRPGVAES-------QS-SSSETV--LSTS-----SKD 513 (528)
Q Consensus 456 ------~~~~~~~~h~~~V~~l~~s~d~-l~t~s~Dg~i~iW~~~~~~~~-------~~-~~~~~v--l~~s-----pd~ 513 (528)
+++..+.+|.+.|++|+|+||+ |++|+.|++|+|||+.+.... .. +|...| ++|+ |||
T Consensus 560 ~~~~g~~~~~~l~~h~~~V~svafSpdG~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg 639 (902)
T 2oaj_A 560 GVRQGFMPSTAVHANKGKTSAINNSNIGFVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDG 639 (902)
T ss_dssp TCSEEEEEEEEECCCSCSEEEEEECBTSEEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSS
T ss_pred CCCCccceeEEEEcCCCcEEEEEecCCcEEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCC
Confidence 2467788999999999999996 889999999999999876532 22 677778 8899 886
Q ss_pred ---ceEEEeeeeccc
Q 009715 514 ---KPLLSSKVVTSS 525 (528)
Q Consensus 514 ---~~l~s~~~~gs~ 525 (528)
++|++++.+|.+
T Consensus 640 ~~~~~l~sgs~D~tv 654 (902)
T 2oaj_A 640 YSSILMVCGTDMGEV 654 (902)
T ss_dssp SEEEEEEEEETTSEE
T ss_pred CcceEEEEEecCCcE
Confidence 999999988765
No 26
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.7e-35 Score=291.54 Aligned_cols=304 Identities=18% Similarity=0.206 Sum_probs=251.4
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
+++++.++++..++.+..|+.... ... ... ..|...|++++|+|+++ +|++++ ||.|++|++....
T Consensus 18 s~dg~~~~~~~~~~~~~~~~~~~~-----~~~---~~~----~~h~~~v~~~~~~~~~~-~l~~~~-dg~i~iw~~~~~~ 83 (337)
T 1gxr_A 18 TADGQMQPVPFPPDALIGPGIPRH-----ARQ---INT----LNHGEVVCAVTISNPTR-HVYTGG-KGCVKVWDISHPG 83 (337)
T ss_dssp CSSSCEEECCCCTTSSSSTTCCSE-----EEE---EEE----ECCSSCCCEEEECSSSS-EEEEEC-BSEEEEEETTSTT
T ss_pred CCCCCEEEeecCCCcEeccccCCc-----ccc---cee----ccCCCceEEEEEecCCc-EEEEcC-CCeEEEEECCCCC
Confidence 467777777766666555533321 001 111 12899999999999999 898888 9999999998632
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEe--ecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCce--EEeeeccc
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWH--ICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQ--LICGGKSY 320 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~ 320 (528)
. ...+..+. .|...|.+++|+|++++|++++.|+.|++||+.+++ ....+..|
T Consensus 84 ~-----------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 140 (337)
T 1gxr_A 84 N-----------------------KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS 140 (337)
T ss_dssp C-----------------------CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECS
T ss_pred c-----------------------eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccC
Confidence 2 12223333 578899999999999999999999999999999877 56667788
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeE
Q 009715 321 YGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRL 400 (528)
Q Consensus 321 ~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i 400 (528)
...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+++|+| ++ .+|++++.|+.|
T Consensus 141 ~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~-------~~------~~l~~~~~dg~i 207 (337)
T 1gxr_A 141 APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN-------DG------TKLWTGGLDNTV 207 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-------TS------SEEEEEETTSEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECC-------CC------CEEEEEecCCcE
Confidence 99999999999999999999999999999999999999999999999999999 88 689999999999
Q ss_pred EEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--E
Q 009715 401 LLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--V 478 (528)
Q Consensus 401 ~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l 478 (528)
++||+++++.+..+.....+..+.|++++ ..+.++..++.+.+||+...+. ..+..|...|.+++|+|++ |
T Consensus 208 ~~~d~~~~~~~~~~~~~~~v~~~~~s~~~------~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l 280 (337)
T 1gxr_A 208 RSWDLREGRQLQQHDFTSQIFSLGYCPTG------EWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWF 280 (337)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEECTTS------SEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEE
T ss_pred EEEECCCCceEeeecCCCceEEEEECCCC------CEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEE
Confidence 99999999999888877777888888876 5677888899999999988765 4667899999999999974 9
Q ss_pred EEEECCCeEEEEeCCCCcccc-CCCccce--EEEccCCceEEEeeeeccc
Q 009715 479 LTVCREGHIKIWMRPGVAESQ-SSSSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 479 ~t~s~Dg~i~iW~~~~~~~~~-~~~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
++++.||.|++|++..+.... ..+...+ ++++||+++|++++.+|.+
T Consensus 281 ~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 330 (337)
T 1gxr_A 281 VSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred EEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeE
Confidence 999999999999998876443 3456666 8889999999999888765
No 27
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.7e-36 Score=347.75 Aligned_cols=397 Identities=18% Similarity=0.211 Sum_probs=312.5
Q ss_pred hhhhhhhhcCCCCCceeeccCCCCCCCccccCCcccCCcccCCCCCCc--------------------------------
Q 009715 86 VRSAAAKLLGTGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSM-------------------------------- 133 (528)
Q Consensus 86 ~~~~~~~~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~-------------------------------- 133 (528)
......++|+..++.....+.+|.+.|+++.|+| ++.++++++.+..
T Consensus 720 ~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1249)
T 3sfz_A 720 SNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVE 798 (1249)
T ss_dssp ETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCC
T ss_pred eCCCeEEEEECCCcchhheecCCCCCEEEEEEec-CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCcccccc
Confidence 3456788999999999999999999999999999 6666666654221
Q ss_pred ---ceeeeCCCccEEEEeCCCcEEEEeCCCCCCC----------------CCCCCeEEEEecCCcEEEEEcccccccccc
Q 009715 134 ---TNTNFDGKGTYIIFNVGDAIFISDLNSQDKD----------------AKDGHDLLIGLNSGDVYSVSLRQQLQDVGK 194 (528)
Q Consensus 134 ---~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~----------------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~ 194 (528)
..+.+.++|..++......+.+|++...... +++++.+++++.+|.|++||+.+..
T Consensus 799 ~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~----- 873 (1249)
T 3sfz_A 799 VIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRL----- 873 (1249)
T ss_dssp CCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTE-----
T ss_pred ceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-----
Confidence 1234566777777766777888887754322 8899999999999999999997621
Q ss_pred ceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccc------cccceeEEeccCCCC
Q 009715 195 KLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVI------KDQTQFSVAHPRYSK 268 (528)
Q Consensus 195 ~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 268 (528)
.. .....|...|++++|+|++. +|++++.||.|++|++............. .......... ..
T Consensus 874 ~~-------~~~~~h~~~v~~v~~spdg~-~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 942 (1249)
T 3sfz_A 874 KV-------ADCRGHLSWVHGVMFSPDGS-SFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAV---DN 942 (1249)
T ss_dssp EE-------EEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEE---ES
T ss_pred ee-------eecCCCccceEEEEECCCCC-EEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEe---cC
Confidence 11 11124899999999999999 99999999999999986421110000000 0000000000 01
Q ss_pred CCCeEEE--------eecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEe
Q 009715 269 SNPIARW--------HICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGG 340 (528)
Q Consensus 269 ~~~~~~~--------~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~ 340 (528)
...+..+ ..+...+.+++|+|+++++++++.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++
T Consensus 943 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 1022 (1249)
T 3sfz_A 943 IRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSS 1022 (1249)
T ss_dssp SSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEEC
T ss_pred CcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEc
Confidence 1112222 22456799999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec-CCC
Q 009715 341 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR-GPL 419 (528)
Q Consensus 341 ~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~-~~~ 419 (528)
.|+.|++||+.+++.+. +..|...|.+++|+| ++ .+++++.|+.|++||+.+++.+..+.. ...
T Consensus 1023 ~dg~i~vwd~~~~~~~~-~~~~~~~v~~~~~~~-------~~-------~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~ 1087 (1249)
T 3sfz_A 1023 EDSVIQVWNWQTGDYVF-LQAHQETVKDFRLLQ-------DS-------RLLSWSFDGTVKVWNVITGRIERDFTCHQGT 1087 (1249)
T ss_dssp SSSBEEEEETTTTEEEC-CBCCSSCEEEEEECS-------SS-------EEEEEESSSEEEEEETTTTCCCEEEECCSSC
T ss_pred CCCEEEEEECCCCceEE-EecCCCcEEEEEEcC-------CC-------cEEEEECCCcEEEEECCCCceeEEEcccCCc
Confidence 99999999999988764 457999999999999 87 688999999999999999998888874 356
Q ss_pred CCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCcc
Q 009715 420 GGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAE 497 (528)
Q Consensus 420 ~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~ 497 (528)
+..++|++++ ..+..++.++.+++||+...+++..+.+|...|++++|+|++ |++++.||.|++||+.++..
T Consensus 1088 v~~~~~s~d~------~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1088 VLSCAISSDA------TKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQL 1161 (1249)
T ss_dssp CCCEEECSSS------SSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCC
T ss_pred EEEEEECCCC------CEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCce
Confidence 7888998887 456788889999999999999999999999999999999985 99999999999999987663
Q ss_pred cc-----------CCCccce--EEEccCCceEEEee
Q 009715 498 SQ-----------SSSSETV--LSTSSKDKPLLSSK 520 (528)
Q Consensus 498 ~~-----------~~~~~~v--l~~spd~~~l~s~~ 520 (528)
.. ..|...| ++|+||+++|++++
T Consensus 1162 ~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~ 1197 (1249)
T 3sfz_A 1162 LHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG 1197 (1249)
T ss_dssp CCCCCCCC-------CCSCCCEEEECTTSSCEEEES
T ss_pred EEEeccccccccccccCceEEEEEECCCCCEEEECC
Confidence 32 2466666 99999999999885
No 28
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.7e-35 Score=290.87 Aligned_cols=283 Identities=16% Similarity=0.216 Sum_probs=233.4
Q ss_pred cccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEE
Q 009715 207 SVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIA 286 (528)
Q Consensus 207 ~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 286 (528)
..|.+.|++++|+|++.++|++|+.|++|++|++..... . ...++..+.+|...|.+++
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~------------~---------~~~~~~~~~~h~~~v~~~~ 72 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ------------K---------FGVPVRSFKGHSHIVQDCT 72 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT------------E---------EEEEEEEEECCSSCEEEEE
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc------------c---------ccccceEEeCCcccEEEEE
Confidence 359999999999998755999999999999999864210 0 0135677889999999999
Q ss_pred ECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCe
Q 009715 287 FSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWV 366 (528)
Q Consensus 287 ~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V 366 (528)
|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|+.|++||++ ++++..+.+|...|
T Consensus 73 ~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v 151 (319)
T 3frx_A 73 LTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWV 151 (319)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCE
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999997 56778888999999
Q ss_pred EEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec-CCCCCCCeecCCCCCccCCceeeeecCCC
Q 009715 367 SGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR-GPLGGSPTFSTGSQSAHWDNVCPVGTLQP 445 (528)
Q Consensus 367 ~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~d~~~~~g~~~~ 445 (528)
.+++|.| ++.......+|++++.|+.|++||+++.+....+.. ...+..++|++++ ..+..++.++
T Consensus 152 ~~~~~~~-------~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g------~~l~s~~~dg 218 (319)
T 3frx_A 152 SQVRVVP-------NEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDG------TLIASAGKDG 218 (319)
T ss_dssp EEEEECC-------C------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTS------SEEEEEETTC
T ss_pred EEEEEcc-------CCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCC------CEEEEEeCCC
Confidence 9999998 331000114799999999999999999988877754 3466778888877 5678899999
Q ss_pred CceeeecCCCCceEEeecCCCCeEEEEEeCCe-EEEEECCCeEEEEeCCCCcccc----------CCCccce--EEEccC
Q 009715 446 APSMRDVPKLSPLVAHRVHTEPLSGLIFTQES-VLTVCREGHIKIWMRPGVAESQ----------SSSSETV--LSTSSK 512 (528)
Q Consensus 446 ~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-l~t~s~Dg~i~iW~~~~~~~~~----------~~~~~~v--l~~spd 512 (528)
.+++||+...+++..+..+ ..|.+++|+|++ ++.++.++.+++|++....... ..+...+ ++|+||
T Consensus 219 ~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd 297 (319)
T 3frx_A 219 EIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSAD 297 (319)
T ss_dssp EEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTT
T ss_pred eEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCC
Confidence 9999999999988888754 689999999985 4445556679999987654211 1223344 889999
Q ss_pred CceEEEeeeeccc
Q 009715 513 DKPLLSSKVVTSS 525 (528)
Q Consensus 513 ~~~l~s~~~~gs~ 525 (528)
|++|++++.+|.+
T Consensus 298 g~~l~sg~~Dg~i 310 (319)
T 3frx_A 298 GQTLFAGYTDNVI 310 (319)
T ss_dssp SSEEEEEETTSCE
T ss_pred CCEEEEeecCceE
Confidence 9999999988765
No 29
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-35 Score=292.13 Aligned_cols=276 Identities=17% Similarity=0.214 Sum_probs=208.8
Q ss_pred eEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCc
Q 009715 170 DLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSS 249 (528)
Q Consensus 170 ~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~ 249 (528)
.|++|+.||.|++||+..... ... ..+ ....|...|++++|+|+++ +|++|+.|++|+||++......
T Consensus 26 ~las~~~D~~i~lw~~~~~~~----~~~--~~~--~~~~h~~~v~~v~~sp~~~-~las~s~D~~v~iw~~~~~~~~--- 93 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDF----TLI--DVL--DETAHKKAIRSVAWRPHTS-LLAAGSFDSTVSIWAKEESADR--- 93 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCC----EEE--EEE--CTTCCCSCEEEEEECTTSS-EEEEEETTSCEEEEEC---------
T ss_pred EEEEEcCCCEEEEEEecCCCe----EEE--EEE--ecCCccCCEEEEEECCCCC-EEEEEeCCCcEEEEEcccCcCc---
Confidence 899999999999999975110 011 011 0112889999999999999 9999999999999998642100
Q ss_pred cccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCC----ceEEeeecccCCCeE
Q 009715 250 FPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSK----EQLICGGKSYYGALL 325 (528)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~----~~~~~~~~~~~~~v~ 325 (528)
......+..+.+|...|.+++|+|++++|++++.|+.|++||+.. .+++..+.+|...|.
T Consensus 94 ----------------~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~ 157 (330)
T 2hes_X 94 ----------------TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVK 157 (330)
T ss_dssp -----------------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEE
T ss_pred ----------------cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceE
Confidence 001234567788999999999999999999999999999999943 356778889999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCC--eEEEEeecCCCCeEEEEEecCCCCCCCC--CCccceeEEEEEEeCCCeEE
Q 009715 326 CCAWSMDGKYILTGGEDDLVQVWSMEDR--KVVAWGEGHNSWVSGVAFDSYWSQPNSD--GTAETVMYRFGSVGQDTRLL 401 (528)
Q Consensus 326 ~l~~sp~g~~l~sg~~dg~v~vwd~~~~--~~~~~~~~h~~~V~~v~f~p~~~~~~~d--g~~~~~~~~l~s~s~D~~i~ 401 (528)
+++|+|++.+|++++.|+.|++||+.++ +++..+.+|...|.+++|+| + + .+|++++.|++|+
T Consensus 158 ~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~-------~~~~------~~l~s~s~D~~v~ 224 (330)
T 2hes_X 158 HVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDK-------TEGV------FRLCSGSDDSTVR 224 (330)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-------SSSS------CEEEEEETTSCEE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecC-------CCCe------eEEEEEeCCCeEE
Confidence 9999999999999999999999999876 67888999999999999999 6 5 5899999999999
Q ss_pred EEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeec-CCCCeEEEEEeCCe-EE
Q 009715 402 LWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRV-HTEPLSGLIFTQES-VL 479 (528)
Q Consensus 402 lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~-h~~~V~~l~~s~d~-l~ 479 (528)
+||++.+.... ...| .....+.. |...|.+++|+++. |+
T Consensus 225 iw~~~~~~~~~----------------------------------~~~~-----~~~~~~~~~h~~~v~~v~~s~~~~l~ 265 (330)
T 2hes_X 225 VWKYMGDDEDD----------------------------------QQEW-----VCEAILPDVHKRQVYNVAWGFNGLIA 265 (330)
T ss_dssp EEEEEEECTTS----------------------------------CEEE-----EEEEECCSCCSSCEEEEEECTTSCEE
T ss_pred EEEecCCCccc----------------------------------ccee-----EEeeecccccccceEEEEEcCCCEEE
Confidence 99987532100 0000 01122333 88999999999875 99
Q ss_pred EEECCCeEEEEeCCCCcc-----ccCCCcc-ce--EEEcc--CCceEEEeeeeccc
Q 009715 480 TVCREGHIKIWMRPGVAE-----SQSSSSE-TV--LSTSS--KDKPLLSSKVVTSS 525 (528)
Q Consensus 480 t~s~Dg~i~iW~~~~~~~-----~~~~~~~-~v--l~~sp--d~~~l~s~~~~gs~ 525 (528)
+++.||.|++|++..+.. ....|.. .| ++|+| ++++|++++.+|.+
T Consensus 266 s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v 321 (330)
T 2hes_X 266 SVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIV 321 (330)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEE
T ss_pred EEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcE
Confidence 999999999999876531 1234655 56 88899 78999999988765
No 30
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.5e-35 Score=314.99 Aligned_cols=373 Identities=16% Similarity=0.139 Sum_probs=290.7
Q ss_pred hhhhhhcCCCCC----ceeeccCCCCCC-CccccCCcc-cCCcccCCCCCCcceeeeCCCccEEEEeCCC--------cE
Q 009715 88 SAAAKLLGTGNG----SRTLGFGGGNGG-SKSISGSSR-IGSLGASSSSTSMTNTNFDGKGTYIIFNVGD--------AI 153 (528)
Q Consensus 88 ~~~~~~~~~~~g----~~~~sf~gh~~~-v~~v~~s~~-~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~--------~i 153 (528)
....++|+..++ .....|.+|.+. |+++.|+|. ++.++++++. +|.+.+|+... ..
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~----------dg~v~vw~~~~~~~~~~~~~~ 107 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE----------SGKVIVWGWTFDKESNSVEVN 107 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEET----------TSEEEEEEEEEEGGGTEEEEE
T ss_pred CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecC----------CCEEEEEeCCCCccccccccc
Confidence 346889999998 888999999999 999999984 4556666654 78888998752 23
Q ss_pred EEEeCCCCCCC------CCCCCeEEEEecC----CcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCC
Q 009715 154 FISDLNSQDKD------AKDGHDLLIGLNS----GDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGD 223 (528)
Q Consensus 154 ~v~~~~~~~~~------~~~~~~l~~g~~~----G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~ 223 (528)
.+..+...... +++++.|++++.+ +.|++||... .. .....|...|++++|+|+++
T Consensus 108 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~-------~~-------~~~~~~~~~v~~~~~~~~~~ 173 (615)
T 1pgu_A 108 VKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN-------SL-------GEVSGHSQRINACHLKQSRP 173 (615)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC-------EE-------EECCSCSSCEEEEEECSSSS
T ss_pred ccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCC-------cc-------eeeecCCccEEEEEECCCCC
Confidence 44444333222 8999999999987 7899998433 11 11123899999999999998
Q ss_pred cEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCC---CeEEEEECCC-CCEEEEEeC
Q 009715 224 GAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQG---SINSIAFSTD-GTYLATVGR 299 (528)
Q Consensus 224 ~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~spd-g~~l~s~~~ 299 (528)
.+|++++.|+.|++||+.. ...+..+..|.. .|.+++|+|+ +++|++++.
T Consensus 174 ~~l~~~~~d~~v~vwd~~~--------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 227 (615)
T 1pgu_A 174 MRSMTVGDDGSVVFYQGPP--------------------------FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS 227 (615)
T ss_dssp CEEEEEETTTEEEEEETTT--------------------------BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET
T ss_pred cEEEEEeCCCcEEEEeCCC--------------------------cceeeeecccCCCCceEEEEEECCCCCCEEEEEeC
Confidence 6799999999999999864 234556677888 9999999999 999999999
Q ss_pred CCcEEEEecCCceEEeee-c---ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecC----CCCeEEEEE
Q 009715 300 DGYLRVFDYSKEQLICGG-K---SYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGH----NSWVSGVAF 371 (528)
Q Consensus 300 dg~i~vwd~~~~~~~~~~-~---~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h----~~~V~~v~f 371 (528)
|+.|++||+.+++.+..+ . .|...|.+++|+ ++++|++++.|+.|++||+++++.+..+..+ ...+.++.|
T Consensus 228 dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (615)
T 1pgu_A 228 DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA 306 (615)
T ss_dssp TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEE
T ss_pred CCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEe
Confidence 999999999999999888 5 799999999999 9999999999999999999999999888866 467888888
Q ss_pred ecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCC-CCCC----------------------------
Q 009715 372 DSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGP-LGGS---------------------------- 422 (528)
Q Consensus 372 ~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~-~~~~---------------------------- 422 (528)
. ++ .++++++.|+.|++||+.+++.+..+.... .+..
T Consensus 307 ~--------~~------~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~ 372 (615)
T 1pgu_A 307 T--------GN------GRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHS 372 (615)
T ss_dssp E--------ET------TEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCC
T ss_pred C--------CC------CeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCccc
Confidence 5 44 489999999999999999887776664321 1111
Q ss_pred -----Cee---------cCCCCCccC------------------------------------------------------
Q 009715 423 -----PTF---------STGSQSAHW------------------------------------------------------ 434 (528)
Q Consensus 423 -----~~~---------s~~~~~~~~------------------------------------------------------ 434 (528)
+.+ +.++....|
T Consensus 373 ~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (615)
T 1pgu_A 373 NLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAV 452 (615)
T ss_dssp SCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEE
T ss_pred CceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEE
Confidence 111 111111122
Q ss_pred ---CceeeeecC-CCCceeeecCCCCce-EEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCccccC--C-Ccc
Q 009715 435 ---DNVCPVGTL-QPAPSMRDVPKLSPL-VAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAESQS--S-SSE 504 (528)
Q Consensus 435 ---d~~~~~g~~-~~~~~~~d~~~~~~~-~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~~~--~-~~~ 504 (528)
...+.++.. ++.+++||+...+.. ..+..|...|.+++|+|++ |++++.||.|++|++..++.... . |..
T Consensus 453 ~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~ 532 (615)
T 1pgu_A 453 SLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTS 532 (615)
T ss_dssp EECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSS
T ss_pred EEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCC
Confidence 223344555 788888888876554 5667899999999999974 99999999999999987764332 3 777
Q ss_pred ce--EEEcc----------CCceEEEeeeeccc
Q 009715 505 TV--LSTSS----------KDKPLLSSKVVTSS 525 (528)
Q Consensus 505 ~v--l~~sp----------d~~~l~s~~~~gs~ 525 (528)
.| ++|+| |+++|++++.+|.+
T Consensus 533 ~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i 565 (615)
T 1pgu_A 533 KINAISWKPAEKGANEEEIEEDLVATGSLDTNI 565 (615)
T ss_dssp CEEEEEECCCC------CCSCCEEEEEETTSCE
T ss_pred ceeEEEEcCccccccccccCCCEEEEEcCCCcE
Confidence 77 88899 99999999888765
No 31
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.9e-35 Score=294.81 Aligned_cols=274 Identities=15% Similarity=0.198 Sum_probs=234.9
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|...|++++|+|++. +|++|+.||+|+|||.... +....+..|...|.+++|
T Consensus 62 gH~~~V~~~~~s~d~~-~l~s~s~Dg~v~vWd~~~~--------------------------~~~~~~~~~~~~v~~~~~ 114 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKR-RIVSSSQDGKVIVWDSFTT--------------------------NKEHAVTMPCTWVMACAY 114 (354)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTC--------------------------CEEEEEECSSSCCCEEEE
T ss_pred CCCCeEEEEEECCCCC-EEEEEeCCCeEEEEECCCC--------------------------CcceEEecCCCCEEEEEE
Confidence 5999999999999998 9999999999999998642 334555667789999999
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCc------eEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec
Q 009715 288 STDGTYLATVGRDGYLRVFDYSKE------QLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEG 361 (528)
Q Consensus 288 spdg~~l~s~~~dg~i~vwd~~~~------~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~ 361 (528)
+|++.+|++++.|+.+++|++... .....+..|...|.+++|+|++.+|++++.|+.|++||+++++++..+.+
T Consensus 115 sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~ 194 (354)
T 2pbi_B 115 APSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG 194 (354)
T ss_dssp CTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC
Confidence 999999999999999999998643 22345567999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC-CCCCCCeecCCCCCccCCceeee
Q 009715 362 HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG-PLGGSPTFSTGSQSAHWDNVCPV 440 (528)
Q Consensus 362 h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~d~~~~~ 440 (528)
|...|.+++|+| +.+| .+|++++.|+.|++||+++++++..+..+ ..+..+.|++++ ..+..
T Consensus 195 h~~~v~~~~~~~-----~~~g------~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~------~~l~s 257 (354)
T 2pbi_B 195 HGADVLCLDLAP-----SETG------NTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSG------DAFAS 257 (354)
T ss_dssp CSSCEEEEEECC-----CSSC------CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS------SEEEE
T ss_pred CCCCeEEEEEEe-----CCCC------CEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCC------CEEEE
Confidence 999999999987 1135 58999999999999999999998888643 456778888876 56788
Q ss_pred ecCCCCceeeecCCCCceEEeecC--CCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCcc--ccCCCccce--EEEccC
Q 009715 441 GTLQPAPSMRDVPKLSPLVAHRVH--TEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAE--SQSSSSETV--LSTSSK 512 (528)
Q Consensus 441 g~~~~~~~~~d~~~~~~~~~~~~h--~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~--~~~~~~~~v--l~~spd 512 (528)
++.++.+++||++..+.+..+..+ ...+.+++|+|++ |++++.|+.|++||+..+.. ....|...| ++|+||
T Consensus 258 ~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spd 337 (354)
T 2pbi_B 258 GSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPD 337 (354)
T ss_dssp EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT
T ss_pred EeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCC
Confidence 999999999999988777666543 3578999999975 99999999999999976653 344788888 889999
Q ss_pred CceEEEeeeeccc
Q 009715 513 DKPLLSSKVVTSS 525 (528)
Q Consensus 513 ~~~l~s~~~~gs~ 525 (528)
|++|++++.+|.+
T Consensus 338 g~~l~sgs~D~~v 350 (354)
T 2pbi_B 338 GTAFCSGSWDHTL 350 (354)
T ss_dssp SSCEEEEETTSEE
T ss_pred CCEEEEEcCCCCE
Confidence 9999999988765
No 32
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.2e-35 Score=297.53 Aligned_cols=278 Identities=18% Similarity=0.253 Sum_probs=220.8
Q ss_pred cCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCC------------------C-C-
Q 009715 105 FGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQD------------------K-D- 164 (528)
Q Consensus 105 f~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~------------------~-~- 164 (528)
..+|.+.|.|+.|+| ++.++++++. +.+.+|+......+..+.... . .
T Consensus 60 ~~~h~~~V~~v~fsp-dg~~la~g~~-----------~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~ 127 (393)
T 1erj_A 60 SLDHTSVVCCVKFSN-DGEYLATGCN-----------KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIR 127 (393)
T ss_dssp EEECSSCCCEEEECT-TSSEEEEECB-----------SCEEEEETTTCCEEEEECC-----------------CCCCBEE
T ss_pred ecCCCCEEEEEEECC-CCCEEEEEcC-----------CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEE
Confidence 348999999999999 7777777653 455555554432222221110 0 0
Q ss_pred ----CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEc
Q 009715 165 ----AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEK 240 (528)
Q Consensus 165 ----~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~ 240 (528)
+++++.|++|+.||.|++||+.+.. .. .....|...|++++|+|+++ +|++++.|++|++||+
T Consensus 128 ~v~~s~dg~~l~s~~~d~~i~iwd~~~~~-----~~-------~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~ 194 (393)
T 1erj_A 128 SVCFSPDGKFLATGAEDRLIRIWDIENRK-----IV-------MILQGHEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDL 194 (393)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTE-----EE-------EEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEET
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCc-----EE-------EEEccCCCCEEEEEEcCCCC-EEEEecCCCcEEEEEC
Confidence 7899999999999999999997621 11 11224899999999999999 9999999999999999
Q ss_pred CCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC-CCCEEEEEeCCCcEEEEecCCceEEeee--
Q 009715 241 SKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST-DGTYLATVGRDGYLRVFDYSKEQLICGG-- 317 (528)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-dg~~l~s~~~dg~i~vwd~~~~~~~~~~-- 317 (528)
.+.. ....+ .+...+.+++|+| ++++|++++.|+.|++||+++++.+..+
T Consensus 195 ~~~~--------------------------~~~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~ 247 (393)
T 1erj_A 195 RTGQ--------------------------CSLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDS 247 (393)
T ss_dssp TTTE--------------------------EEEEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-
T ss_pred CCCe--------------------------eEEEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecc
Confidence 7521 11122 2456799999999 9999999999999999999998877665
Q ss_pred -----cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC------------eEEEEeecCCCCeEEEEEecCCCCCCC
Q 009715 318 -----KSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDR------------KVVAWGEGHNSWVSGVAFDSYWSQPNS 380 (528)
Q Consensus 318 -----~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~------------~~~~~~~~h~~~V~~v~f~p~~~~~~~ 380 (528)
.+|...|.+++|+|++++|++|+.|+.|++||++.. .+...+.+|...|.+++|+|
T Consensus 248 ~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~------- 320 (393)
T 1erj_A 248 ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ------- 320 (393)
T ss_dssp -----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECG-------
T ss_pred cccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC-------
Confidence 568899999999999999999999999999999753 35667789999999999999
Q ss_pred CCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEE
Q 009715 381 DGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVA 460 (528)
Q Consensus 381 dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~ 460 (528)
++ .+|++++.|+.|++||+++++.+. .
T Consensus 321 ~~------~~l~sgs~D~~v~iwd~~~~~~~~-----------------------------------------------~ 347 (393)
T 1erj_A 321 ND------EYILSGSKDRGVLFWDKKSGNPLL-----------------------------------------------M 347 (393)
T ss_dssp GG------CEEEEEETTSEEEEEETTTCCEEE-----------------------------------------------E
T ss_pred CC------CEEEEEeCCCeEEEEECCCCeEEE-----------------------------------------------E
Confidence 88 689999999999999998876543 3
Q ss_pred eecCCCCeEEEEEeC------C--eEEEEECCCeEEEEeCCC
Q 009715 461 HRVHTEPLSGLIFTQ------E--SVLTVCREGHIKIWMRPG 494 (528)
Q Consensus 461 ~~~h~~~V~~l~~s~------d--~l~t~s~Dg~i~iW~~~~ 494 (528)
+.+|...|.+++|++ + .|+|++.||+|+||++..
T Consensus 348 l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 348 LQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred ECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 456899999999986 3 399999999999999764
No 33
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4e-35 Score=289.53 Aligned_cols=297 Identities=18% Similarity=0.258 Sum_probs=239.2
Q ss_pred ceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCCCCCCCeEEEEecCCc
Q 009715 100 SRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKDAKDGHDLLIGLNSGD 179 (528)
Q Consensus 100 ~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~~~~~~~l~~g~~~G~ 179 (528)
....++.||.+.|++|+|+| .++++|++|+.||.
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp----------------------------------------------~~~~~l~S~s~D~~ 62 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTP----------------------------------------------QFPDMILSASRDKT 62 (340)
T ss_dssp EEEEEECCCSSCEEEEEECT----------------------------------------------TCTTEEEEEETTSC
T ss_pred EEEEEECCccCCEEEEEEeC----------------------------------------------CCCCEEEEEcCCCe
Confidence 34456889999999999987 12456788888999
Q ss_pred EEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCcccccccccee
Q 009715 180 VYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQF 259 (528)
Q Consensus 180 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 259 (528)
|++||+......... .......|...|++++|+|+++ +|++++.|+.|++|+....
T Consensus 63 i~vWd~~~~~~~~~~-------~~~~l~~h~~~V~~~~~s~dg~-~l~s~~~d~~i~~~~~~~~---------------- 118 (340)
T 4aow_A 63 IIMWKLTRDETNYGI-------PQRALRGHSHFVSDVVISSDGQ-FALSGSWDGTLRLWDLTTG---------------- 118 (340)
T ss_dssp EEEEEECCSSSCSEE-------EEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTT----------------
T ss_pred EEEEECCCCCcccce-------eeEEEeCCCCCEEEEEECCCCC-EEEEEcccccceEEeeccc----------------
Confidence 999998752211100 1111234899999999999999 9999999999999998752
Q ss_pred EEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceE-EeeecccCCCeEEEEEcCCC--CEE
Q 009715 260 SVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQL-ICGGKSYYGALLCCAWSMDG--KYI 336 (528)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v~~l~~sp~g--~~l 336 (528)
........+...+..+.+++++.+|++++.|+.+++||+..... ......|...+.+++|++++ .++
T Consensus 119 ----------~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 188 (340)
T 4aow_A 119 ----------TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII 188 (340)
T ss_dssp ----------EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEE
T ss_pred ----------ceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEE
Confidence 22334445667888999999999999999999999999986554 34566788999999999865 578
Q ss_pred EEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 337 LTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 337 ~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
++++.|+.|++||+++++++..+.+|...|++++|+| +| .+|++++.|+.|++||+++.+.+..+..
T Consensus 189 ~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~-------~~------~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 255 (340)
T 4aow_A 189 VSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-------DG------SLCASGGKDGQAMLWDLNEGKHLYTLDG 255 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-------TS------SEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred EEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECC-------CC------CEEEEEeCCCeEEEEEeccCceeeeecC
Confidence 8999999999999999999999999999999999999 98 6999999999999999999999999988
Q ss_pred CCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEE---------eecCCCCeEEEEEeCCe--EEEEECCC
Q 009715 417 GPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVA---------HRVHTEPLSGLIFTQES--VLTVCREG 485 (528)
Q Consensus 417 ~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~---------~~~h~~~V~~l~~s~d~--l~t~s~Dg 485 (528)
...+..+.|++++ .+..+..++.+++||++....+.. ..+|...|++++|+||+ |++++.||
T Consensus 256 ~~~v~~~~~~~~~-------~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg 328 (340)
T 4aow_A 256 GDIINALCFSPNR-------YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN 328 (340)
T ss_dssp SSCEEEEEECSSS-------SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS
T ss_pred CceEEeeecCCCC-------ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 7777777787764 334555677788888876654443 34688999999999984 99999999
Q ss_pred eEEEEeCCCCc
Q 009715 486 HIKIWMRPGVA 496 (528)
Q Consensus 486 ~i~iW~~~~~~ 496 (528)
.|+|||+.++.
T Consensus 329 ~v~iW~~~tGt 339 (340)
T 4aow_A 329 LVRVWQVTIGT 339 (340)
T ss_dssp CEEEEEEEC--
T ss_pred EEEEEeCCCcC
Confidence 99999998764
No 34
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.8e-35 Score=287.94 Aligned_cols=268 Identities=19% Similarity=0.254 Sum_probs=233.8
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|...|++++|+|+++ +|++++.||.|++|++.. .+....+..|...|.+++|
T Consensus 21 gh~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~--------------------------~~~~~~~~~h~~~v~~~~~ 73 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYD--------------------------GKFEKTISGHKLGISDVAW 73 (312)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT--------------------------CCEEEEECCCSSCEEEEEE
T ss_pred ccCCcEEEEEECCCCC-EEEEeeCCCeEEEEeCCC--------------------------cccchhhccCCCceEEEEE
Confidence 4999999999999999 999999999999999864 2345567788999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeE
Q 009715 288 STDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVS 367 (528)
Q Consensus 288 spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~ 367 (528)
+|++++|++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++|+.|+.|++||+++++++..+..|...|.
T Consensus 74 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~ 153 (312)
T 4ery_A 74 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS 153 (312)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred cCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC--CCCCCCeecCCCCCccCCceeeeecCCC
Q 009715 368 GVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG--PLGGSPTFSTGSQSAHWDNVCPVGTLQP 445 (528)
Q Consensus 368 ~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~~d~~~~~g~~~~ 445 (528)
+++|+| ++ .+|++++.|+.|++||+++++.+..+... ..+..+.|++++ ..+..++.++
T Consensus 154 ~~~~~~-------~~------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~l~~~~~d~ 214 (312)
T 4ery_A 154 AVHFNR-------DG------SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG------KYILAATLDN 214 (312)
T ss_dssp EEEECT-------TS------SEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTS------SEEEEEETTT
T ss_pred EEEEcC-------CC------CEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCC------CEEEEEcCCC
Confidence 999999 88 68999999999999999999888776432 344557777776 5677888999
Q ss_pred CceeeecCCCCceEEeecCCCCeEE--EEEeC-C--eEEEEECCCeEEEEeCCCCcc--ccCCCccce--EEEccCCceE
Q 009715 446 APSMRDVPKLSPLVAHRVHTEPLSG--LIFTQ-E--SVLTVCREGHIKIWMRPGVAE--SQSSSSETV--LSTSSKDKPL 516 (528)
Q Consensus 446 ~~~~~d~~~~~~~~~~~~h~~~V~~--l~~s~-d--~l~t~s~Dg~i~iW~~~~~~~--~~~~~~~~v--l~~spd~~~l 516 (528)
.+++||++..+.+..+.+|...+.. ..|++ + .|++++.||.|++||+..+.. ....|.+.| ++++|++++|
T Consensus 215 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 294 (312)
T 4ery_A 215 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 294 (312)
T ss_dssp EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEE
T ss_pred eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCce
Confidence 9999999999999999888765433 33443 3 499999999999999987763 334677777 7889999999
Q ss_pred EEeee
Q 009715 517 LSSKV 521 (528)
Q Consensus 517 ~s~~~ 521 (528)
++++.
T Consensus 295 ~s~~~ 299 (312)
T 4ery_A 295 ASAAL 299 (312)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99864
No 35
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=7.2e-35 Score=286.95 Aligned_cols=274 Identities=13% Similarity=0.149 Sum_probs=232.8
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
+++++.|+++. +|.|++||+...... ... ..+. ...|...|++++|+|+++ +|++++.||.|++||+....
T Consensus 60 ~~~~~~l~~~~-dg~i~iw~~~~~~~~---~~~--~~~~--~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~ 130 (337)
T 1gxr_A 60 SNPTRHVYTGG-KGCVKVWDISHPGNK---SPV--SQLD--CLNRDNYIRSCKLLPDGC-TLIVGGEASTLSIWDLAAPT 130 (337)
T ss_dssp CSSSSEEEEEC-BSEEEEEETTSTTCC---SCS--EEEE--CSCTTSBEEEEEECTTSS-EEEEEESSSEEEEEECCCC-
T ss_pred ecCCcEEEEcC-CCeEEEEECCCCCce---eee--eccc--ccCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCC
Confidence 68999999998 999999999762211 000 1111 113888999999999999 99999999999999997521
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCe
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGAL 324 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v 324 (528)
......+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...+
T Consensus 131 ------------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i 186 (337)
T 1gxr_A 131 ------------------------PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA 186 (337)
T ss_dssp -------------------------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred ------------------------cceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCce
Confidence 11345567788999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEE
Q 009715 325 LCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWD 404 (528)
Q Consensus 325 ~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd 404 (528)
.+++|+|++++|++++.|+.|++||+++++.+..+. |...+.+++|+| ++ .+|++++.|+.|++||
T Consensus 187 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~-------~~------~~l~~~~~~~~i~~~~ 252 (337)
T 1gxr_A 187 SCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCP-------TG------EWLAVGMESSNVEVLH 252 (337)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECT-------TS------SEEEEEETTSCEEEEE
T ss_pred EEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECC-------CC------CEEEEEcCCCcEEEEE
Confidence 999999999999999999999999999999888776 888999999999 88 6899999999999999
Q ss_pred ccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEE
Q 009715 405 LEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVC 482 (528)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s 482 (528)
+++++......+...+..+.|++++ ..+..+..++.+++||+...+.+.. ..|...|.+++|+|++ |++++
T Consensus 253 ~~~~~~~~~~~~~~~v~~~~~~~~~------~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 253 VNKPDKYQLHLHESCVLSLKFAYCG------KWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp TTSSCEEEECCCSSCEEEEEECTTS------SEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEE
T ss_pred CCCCCeEEEcCCccceeEEEECCCC------CEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEec
Confidence 9998876555555667778888876 4567888899999999999887744 4588999999999974 99999
Q ss_pred CCCeEEEEeC
Q 009715 483 REGHIKIWMR 492 (528)
Q Consensus 483 ~Dg~i~iW~~ 492 (528)
.||.|++|++
T Consensus 326 ~dg~i~iw~~ 335 (337)
T 1gxr_A 326 GDKKATVYEV 335 (337)
T ss_dssp TTSCEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9999999996
No 36
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.3e-35 Score=314.11 Aligned_cols=380 Identities=14% Similarity=0.141 Sum_probs=284.5
Q ss_pred hhhhhhcCCCCC--------ceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCC
Q 009715 88 SAAAKLLGTGNG--------SRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLN 159 (528)
Q Consensus 88 ~~~~~~~~~~~g--------~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~ 159 (528)
....++|+..++ .....+.+|.+.|.++.|+| ++.++++++.+. +..+.++.|+.++.+.. +.
T Consensus 87 dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~------~~~~~v~~~d~~~~~~~--~~ 157 (615)
T 1pgu_A 87 SGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGR------DNFGVFISWDSGNSLGE--VS 157 (615)
T ss_dssp TSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCS------SCSEEEEETTTCCEEEE--CC
T ss_pred CCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeC-CCCEEEEeccCC------CCccEEEEEECCCccee--ee
Confidence 567899999755 67778889999999999999 555555554300 11277888886554433 33
Q ss_pred CCCCC------CCCCC-eEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCC---ceeEEEEeeC-CCcEEEE
Q 009715 160 SQDKD------AKDGH-DLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNS---RCTSVTWVPG-GDGAFVV 228 (528)
Q Consensus 160 ~~~~~------~~~~~-~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~~p~-g~~~l~t 228 (528)
.+... ++++. .|++++.||.|++||+.... . ......|.. .|++++|+|+ ++ +|++
T Consensus 158 ~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~-----~-------~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~ 224 (615)
T 1pgu_A 158 GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK-----F-------SASDRTHHKQGSFVRDVEFSPDSGE-FVIT 224 (615)
T ss_dssp SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE-----E-------EEEECSSSCTTCCEEEEEECSTTCC-EEEE
T ss_pred cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc-----e-------eeeecccCCCCceEEEEEECCCCCC-EEEE
Confidence 33222 77887 79999999999999987621 1 111123777 8999999999 88 9999
Q ss_pred EeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEE-e---ecCCCeEEEEECCCCCEEEEEeCCCcEE
Q 009715 229 GHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARW-H---ICQGSINSIAFSTDGTYLATVGRDGYLR 304 (528)
Q Consensus 229 g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~h~~~v~~l~~spdg~~l~s~~~dg~i~ 304 (528)
++.||.|++||+... +.+..+ . .|...|.+++|+ ++.+|++++.|+.|+
T Consensus 225 ~~~dg~i~vwd~~~~--------------------------~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~ 277 (615)
T 1pgu_A 225 VGSDRKISCFDGKSG--------------------------EFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIR 277 (615)
T ss_dssp EETTCCEEEEETTTC--------------------------CEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEE
T ss_pred EeCCCeEEEEECCCC--------------------------CEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEE
Confidence 999999999998752 234444 4 688999999999 999999999999999
Q ss_pred EEecCCceEEeeeccc----CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecC------
Q 009715 305 VFDYSKEQLICGGKSY----YGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSY------ 374 (528)
Q Consensus 305 vwd~~~~~~~~~~~~~----~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~------ 374 (528)
+||+.+++.+..+..+ ...+.++.|+ +++++++++.|+.|++||+++++++..+.+|...|.+++| |.
T Consensus 278 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~ 355 (615)
T 1pgu_A 278 VWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSY 355 (615)
T ss_dssp EEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEET
T ss_pred EEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECC
Confidence 9999999998887765 3677888886 8899999999999999999999988888888877777776 41
Q ss_pred ------CCC-------C-------CCCCC---------------------------------------------------
Q 009715 375 ------WSQ-------P-------NSDGT--------------------------------------------------- 383 (528)
Q Consensus 375 ------~~~-------~-------~~dg~--------------------------------------------------- 383 (528)
|.. . -+++.
T Consensus 356 dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 435 (615)
T 1pgu_A 356 DGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSF 435 (615)
T ss_dssp TSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETT
T ss_pred CCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEecc
Confidence 000 0 00010
Q ss_pred -ccce---------------eEEEEEEeC-CCeEEEEEccCCeEE-EEee-cCCCCCCCeecCCCCCccCCceeeeecCC
Q 009715 384 -AETV---------------MYRFGSVGQ-DTRLLLWDLEMDEIV-VPLR-RGPLGGSPTFSTGSQSAHWDNVCPVGTLQ 444 (528)
Q Consensus 384 -~~~~---------------~~~l~s~s~-D~~i~lwd~~~~~~~-~~~~-~~~~~~~~~~s~~~~~~~~d~~~~~g~~~ 444 (528)
++.. ..+|++++. |+.|++||+..++.. ..+. +...+..+.|++++ ..+..++.+
T Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g------~~l~~~~~d 509 (615)
T 1pgu_A 436 TGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSE------TYIAAGDVM 509 (615)
T ss_dssp TCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTS------SEEEEEETT
T ss_pred CCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCC------CEEEEcCCC
Confidence 0000 124555555 666666666655443 2221 22345566777665 567888899
Q ss_pred CCceeeecCCCCceEEeec-CCCCeEEEEEeC----------Ce--EEEEECCCeEEEEeCCCC-c--cccCCCccce--
Q 009715 445 PAPSMRDVPKLSPLVAHRV-HTEPLSGLIFTQ----------ES--VLTVCREGHIKIWMRPGV-A--ESQSSSSETV-- 506 (528)
Q Consensus 445 ~~~~~~d~~~~~~~~~~~~-h~~~V~~l~~s~----------d~--l~t~s~Dg~i~iW~~~~~-~--~~~~~~~~~v-- 506 (528)
+.+++||+...+++..+.+ |...|++++|+| ++ |++++.||.|++|++... . .....|...|
T Consensus 510 g~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~ 589 (615)
T 1pgu_A 510 GKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNN 589 (615)
T ss_dssp SCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEE
T ss_pred CeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEE
Confidence 9999999999999988888 999999999999 74 999999999999999876 2 2334677888
Q ss_pred EEEccCCceEEEeeeeccc
Q 009715 507 LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 507 l~~spd~~~l~s~~~~gs~ 525 (528)
++|+||++ |++++.+|.+
T Consensus 590 l~~s~~~~-l~s~~~d~~v 607 (615)
T 1pgu_A 590 LLWETPST-LVSSGADACI 607 (615)
T ss_dssp EEEEETTE-EEEEETTSCE
T ss_pred EEEcCCCC-eEEecCCceE
Confidence 88999999 9999888765
No 37
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-36 Score=305.36 Aligned_cols=310 Identities=14% Similarity=0.185 Sum_probs=251.8
Q ss_pred CCCCC-eEEEE----------ecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCc
Q 009715 165 AKDGH-DLLIG----------LNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADG 233 (528)
Q Consensus 165 ~~~~~-~l~~g----------~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg 233 (528)
+|++. +|++| +.||.|++||+...... .... ...|...|++++|+|++. +|++++.||
T Consensus 21 sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~---~~~~-------~~~~~~~v~~~~~s~~~~-~l~~~~~dg 89 (416)
T 2pm9_A 21 SHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE---KPIA-------SLQVDSKFNDLDWSHNNK-IIAGALDNG 89 (416)
T ss_dssp CSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC---SCSC-------CCCCSSCEEEEEECSSSS-CEEEEESSS
T ss_pred CCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC---cEEE-------EEecCCceEEEEECCCCC-eEEEEccCC
Confidence 57765 77777 78999999999862211 0110 112888999999999999 999999999
Q ss_pred eEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC-CCEEEEEeCCCcEEEEecCCce
Q 009715 234 NLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD-GTYLATVGRDGYLRVFDYSKEQ 312 (528)
Q Consensus 234 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd-g~~l~s~~~dg~i~vwd~~~~~ 312 (528)
.|++|++..... ....+..+..|...|.+++|+|+ +++|++++.|+.|++||+.+++
T Consensus 90 ~v~vw~~~~~~~----------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 90 SLELYSTNEANN----------------------AINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp CEEEECCSSTTS----------------------CCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred eEEEeecccccc----------------------cccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence 999999975211 12356667789999999999998 8999999999999999999876
Q ss_pred ------EEe---eecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeEEEEeecC------CCCeEEEEEecCCC
Q 009715 313 ------LIC---GGKSYYGALLCCAWSMD-GKYILTGGEDDLVQVWSMEDRKVVAWGEGH------NSWVSGVAFDSYWS 376 (528)
Q Consensus 313 ------~~~---~~~~~~~~v~~l~~sp~-g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h------~~~V~~v~f~p~~~ 376 (528)
... ....|...|.+++|+|+ +.+|++++.|+.|++||+++++++..+..| ...|.+++|+|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--- 224 (416)
T 2pm9_A 148 ESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP--- 224 (416)
T ss_dssp SCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS---
T ss_pred cccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC---
Confidence 332 23568899999999999 789999999999999999999998888866 78999999999
Q ss_pred CCCCCCCccceeEEEEEEeCCC---eEEEEEccCC-eEEEEee--cCCCCCCCeecC-CCCCccCCceeeeecCCCCcee
Q 009715 377 QPNSDGTAETVMYRFGSVGQDT---RLLLWDLEMD-EIVVPLR--RGPLGGSPTFST-GSQSAHWDNVCPVGTLQPAPSM 449 (528)
Q Consensus 377 ~~~~dg~~~~~~~~l~s~s~D~---~i~lwd~~~~-~~~~~~~--~~~~~~~~~~s~-~~~~~~~d~~~~~g~~~~~~~~ 449 (528)
++. .+|++++.|+ .|++||++++ +.+..+. +...+..+.|++ ++ ..+..++.++.+++
T Consensus 225 ----~~~-----~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~------~~l~s~~~dg~v~~ 289 (416)
T 2pm9_A 225 ----KNS-----TRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDE------HLLLSSGRDNTVLL 289 (416)
T ss_dssp ----SCT-----TEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCS------SCEEEEESSSEEEE
T ss_pred ----CCC-----CEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCC------CeEEEEeCCCCEEE
Confidence 752 4899999998 9999999986 5555554 334566777777 44 56778888999999
Q ss_pred eecCCCCceEEeecCCCCeEEEEEeCCe---EEEEECCCeEEEEeCCCCccccCC-------------------------
Q 009715 450 RDVPKLSPLVAHRVHTEPLSGLIFTQES---VLTVCREGHIKIWMRPGVAESQSS------------------------- 501 (528)
Q Consensus 450 ~d~~~~~~~~~~~~h~~~V~~l~~s~d~---l~t~s~Dg~i~iW~~~~~~~~~~~------------------------- 501 (528)
||+...+++..+..|...|.+++|+|++ |++++.|+.|++|++.........
T Consensus 290 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (416)
T 2pm9_A 290 WNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKE 369 (416)
T ss_dssp ECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCS
T ss_pred eeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccc
Confidence 9999999999999999999999999963 999999999999999765532211
Q ss_pred ------------Cccce--EEEccCCceEEEeeeeccc
Q 009715 502 ------------SSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 502 ------------~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
+...+ ++|+|||++|++++.+|.+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v 407 (416)
T 2pm9_A 370 KPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGV 407 (416)
T ss_dssp CCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCB
T ss_pred ccccccccCCccccCCccceEEeeCCeEEEEeCCCCeE
Confidence 33344 8999999999999887765
No 38
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.6e-36 Score=302.34 Aligned_cols=276 Identities=17% Similarity=0.218 Sum_probs=225.4
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
+|+++.|++|+.||.|++||+.+.. .. .....|...|.+++|+|+++ +|++|+.|+.|++|++....
T Consensus 75 sp~~~~l~s~s~D~~v~iWd~~~~~-----~~-------~~~~~h~~~v~~~~~s~~g~-~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 75 TPEKNWIVSASQDGRLIVWNALTSQ-----KT-------HAIKLHCPWVMECAFAPNGQ-SVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp CTTSSCEEEEETTSEEEEEETTTTE-----EE-------EEEECCCTTCCCCEECTTSS-EEEECCSSSCCEEEECCCCS
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCc-----cc-------eEEecCCCCEEEEEECCCCC-EEEEeeCCCcEEEEECCCCc
Confidence 5899999999999999999987621 11 11123888999999999999 99999999999999997532
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC-CCEEEEEeCCCcEEEEecCCceEEeee-----c
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD-GTYLATVGRDGYLRVFDYSKEQLICGG-----K 318 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd-g~~l~s~~~dg~i~vwd~~~~~~~~~~-----~ 318 (528)
.... .......+.+|.+.|.++.|+|+ +..|++++.|+.|++||+.+++.+..+ .
T Consensus 142 ~~~~-------------------~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~ 202 (380)
T 3iz6_a 142 DRDG-------------------NMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPS 202 (380)
T ss_dssp SCCC-------------------SSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSS
T ss_pred cccC-------------------CccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCC
Confidence 1110 11233456788999999999995 567999999999999999999988766 5
Q ss_pred ccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECC-CCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeC
Q 009715 319 SYYGALLCCAWSM-DGKYILTGGEDDLVQVWSME-DRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQ 396 (528)
Q Consensus 319 ~~~~~v~~l~~sp-~g~~l~sg~~dg~v~vwd~~-~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~ 396 (528)
+|...|.+++|++ ++.+|++|+.|+.|++||++ .++++..+.+|...|.+++|+| +| .+|++++.
T Consensus 203 ~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p-------~~------~~l~s~s~ 269 (380)
T 3iz6_a 203 GHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFP-------DG------QRFGTGSD 269 (380)
T ss_dssp SCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECT-------TS------SEEEEECS
T ss_pred CCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEec-------CC------CeEEEEcC
Confidence 7889999999987 88999999999999999998 4577888999999999999999 98 68999999
Q ss_pred CCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCC
Q 009715 397 DTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQE 476 (528)
Q Consensus 397 D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d 476 (528)
|++|++||+++++.+..+...... ...+...|.+++|+|+
T Consensus 270 D~~i~lwd~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~v~~~~~s~~ 309 (380)
T 3iz6_a 270 DGTCRLFDMRTGHQLQVYNREPDR----------------------------------------NDNELPIVTSVAFSIS 309 (380)
T ss_dssp SSCEEEEETTTTEEEEEECCCCSS----------------------------------------SCCSSCSCSEEEECSS
T ss_pred CCeEEEEECCCCcEEEEecccccc----------------------------------------cccccCceEEEEECCC
Confidence 999999999999887766431100 0123445889999997
Q ss_pred e--EEEEECCCeEEEEeCCCCccc------cCCCccce--EEEccCCceEEEeeeeccc
Q 009715 477 S--VLTVCREGHIKIWMRPGVAES------QSSSSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 477 ~--l~t~s~Dg~i~iW~~~~~~~~------~~~~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
+ |++++.||.|++||+...... ...|...| ++|+|||++|++|+.+|.+
T Consensus 310 g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 310 GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNL 368 (380)
T ss_dssp SSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCE
T ss_pred CCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCE
Confidence 5 999999999999998765532 13577777 8999999999999988764
No 39
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-35 Score=302.41 Aligned_cols=348 Identities=12% Similarity=0.123 Sum_probs=263.5
Q ss_pred hhhhcCCCCCceeeccCCCCCCCccccCCcccCC-cccCCCCCCcceeeeCCCccEEEEeC----CCcE------EEEeC
Q 009715 90 AAKLLGTGNGSRTLGFGGGNGGSKSISGSSRIGS-LGASSSSTSMTNTNFDGKGTYIIFNV----GDAI------FISDL 158 (528)
Q Consensus 90 ~~~~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~-~~~s~s~~s~~~~~~~~~g~~~~~~~----~~~i------~v~~~ 158 (528)
...+|........+....|.+.|+++.|+| ++. ++++++. +|.+.+|+. .... ....+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 94 (425)
T 1r5m_A 26 IDSSDDLDGFVKILKEIVKLDNIVSSTWNP-LDESILAYGEK----------NSVARLARIVETDQEGKKYWKLTIIAEL 94 (425)
T ss_dssp --------CCCEECEEEEECSCCSEEEECS-SCTTEEEEEET----------BTEEEEEEEEEC------CEEEEEEEEE
T ss_pred ccccccchhhhhheeeeeccCceEEEEECC-CCCcEEEEecC----------CceEEEEEEecccCCccccccccccccc
Confidence 445677777777777778889999999999 454 6666553 788888887 4433 22222
Q ss_pred CC----------CCCC------CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCC
Q 009715 159 NS----------QDKD------AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGG 222 (528)
Q Consensus 159 ~~----------~~~~------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g 222 (528)
.. .... +++++.|++|+.+|.|++||.... ... . ...|...|++++|+|++
T Consensus 95 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~------~~~---~----~~~~~~~v~~~~~~~~~ 161 (425)
T 1r5m_A 95 RHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGA------LLN---V----LNFHRAPIVSVKWNKDG 161 (425)
T ss_dssp ECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEETTSC------EEE---E----ECCCCSCEEEEEECTTS
T ss_pred cccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCC------eee---e----ccCCCccEEEEEECCCC
Confidence 22 1111 889999999999999999994331 111 1 12388999999999999
Q ss_pred CcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCc
Q 009715 223 DGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGY 302 (528)
Q Consensus 223 ~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~ 302 (528)
+ +|++++.||.|++||+.... ....+....... ..........+...+.+++|+|++ .+++++.|+.
T Consensus 162 ~-~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~ 228 (425)
T 1r5m_A 162 T-HIISMDVENVTILWNVISGT-VMQHFELKETGG----------SSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGA 228 (425)
T ss_dssp S-EEEEEETTCCEEEEETTTTE-EEEEECCC-------------------------CCCBSCCEEEETT-EEEEECGGGC
T ss_pred C-EEEEEecCCeEEEEECCCCc-EEEEeeccccCc----------cceeeccccCCcceeeEEEEcCCC-EEEEEcCCCe
Confidence 9 99999999999999997521 111111000000 000000111112238899999975 5889999999
Q ss_pred EEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCC
Q 009715 303 LRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDG 382 (528)
Q Consensus 303 i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg 382 (528)
|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+.+|...|.+++|+| ++
T Consensus 229 i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-------~~ 301 (425)
T 1r5m_A 229 IFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVG-------DD 301 (425)
T ss_dssp EEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEET-------TT
T ss_pred EEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECC-------CC
Confidence 99999999988888888999999999999999999999999999999999999999999999999999999 87
Q ss_pred CccceeEEEEEEeCCCeEEEEEccCCeEEEEeec-CCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCC-----
Q 009715 383 TAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR-GPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLS----- 456 (528)
Q Consensus 383 ~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~----- 456 (528)
+|++++.|+.|++||+++++.+..+.. ...+..+.|++++ ..+.+++.++.+.+||+...+
T Consensus 302 -------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~------~~l~~~~~dg~i~i~~~~~~~~~~~~ 368 (425)
T 1r5m_A 302 -------KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDG------QKYAVAFMDGQVNVYDLKKLNSKSRS 368 (425)
T ss_dssp -------EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTS------SEEEEEETTSCEEEEECHHHHC----
T ss_pred -------EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCC------CEEEEEECCCeEEEEECCCCccceee
Confidence 799999999999999999999888875 3466777888876 567788889999999998777
Q ss_pred ---------------ceEEeecCCC--CeEEEEEeCCe--EEEEECCCeEEEEeCCC
Q 009715 457 ---------------PLVAHRVHTE--PLSGLIFTQES--VLTVCREGHIKIWMRPG 494 (528)
Q Consensus 457 ---------------~~~~~~~h~~--~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~ 494 (528)
++..+..|.. .|.+++|+|++ |++++.||.|++|++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 369 LYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp ----------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred eecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeecC
Confidence 8889999977 99999999984 99999999999999874
No 40
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.2e-35 Score=317.99 Aligned_cols=272 Identities=19% Similarity=0.263 Sum_probs=222.3
Q ss_pred CCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCC
Q 009715 168 GHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGD 247 (528)
Q Consensus 168 ~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~ 247 (528)
++.|++|+.||.|++||+......... .......|...|++++|+|+++ +|++|+.||+|+|||+.+
T Consensus 395 ~~~l~s~s~D~~i~~W~~~~~~~~~~~-------~~~~~~~h~~~v~~v~~s~~g~-~l~sgs~Dg~v~vwd~~~----- 461 (694)
T 3dm0_A 395 ADIIVSASRDKSIILWKLTKDDKAYGV-------AQRRLTGHSHFVEDVVLSSDGQ-FALSGSWDGELRLWDLAA----- 461 (694)
T ss_dssp CSEEEEEETTSEEEEEECCCSTTCSCE-------EEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT-----
T ss_pred CCEEEEEeCCCcEEEEEccCCCccccc-------ccceecCCCCcEEEEEECCCCC-EEEEEeCCCcEEEEECCC-----
Confidence 456778888899999988652111000 0111224999999999999999 999999999999999975
Q ss_pred CccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEee---ecccCCCe
Q 009715 248 SSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICG---GKSYYGAL 324 (528)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~---~~~~~~~v 324 (528)
...+..+.+|...|.+++|+|++++|++++.|+.|++||+........ ..+|...|
T Consensus 462 ---------------------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v 520 (694)
T 3dm0_A 462 ---------------------GVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWV 520 (694)
T ss_dssp ---------------------TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCE
T ss_pred ---------------------CcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcE
Confidence 234567788999999999999999999999999999999875544332 24688899
Q ss_pred EEEEEcCCC--CEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEE
Q 009715 325 LCCAWSMDG--KYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLL 402 (528)
Q Consensus 325 ~~l~~sp~g--~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~l 402 (528)
.+++|+|++ .+|++++.|+.|++||+++++++..+.+|...|++++|+| +| .+|++++.|+.|++
T Consensus 521 ~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp-------dg------~~l~sg~~Dg~i~i 587 (694)
T 3dm0_A 521 SCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-------DG------SLCASGGKDGVVLL 587 (694)
T ss_dssp EEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-------TS------SEEEEEETTSBCEE
T ss_pred EEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC-------CC------CEEEEEeCCCeEEE
Confidence 999999987 5899999999999999999999999999999999999999 99 69999999999999
Q ss_pred EEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCC-----------------
Q 009715 403 WDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHT----------------- 465 (528)
Q Consensus 403 wd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~----------------- 465 (528)
||+++++.+..+.....+..++|++++. .+ ....+..+++||+...+.+..+..|.
T Consensus 588 wd~~~~~~~~~~~~~~~v~~~~~sp~~~------~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (694)
T 3dm0_A 588 WDLAEGKKLYSLEANSVIHALCFSPNRY------WL-CAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKR 660 (694)
T ss_dssp EETTTTEEEECCBCSSCEEEEEECSSSS------EE-EEEETTEEEEEETTTTEEEEEECCCCC----------------
T ss_pred EECCCCceEEEecCCCcEEEEEEcCCCc------EE-EEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCc
Confidence 9999999998887766777788887752 22 33345568999998887776664322
Q ss_pred --CCeEEEEEeCCe--EEEEECCCeEEEEeCC
Q 009715 466 --EPLSGLIFTQES--VLTVCREGHIKIWMRP 493 (528)
Q Consensus 466 --~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~ 493 (528)
..+++++|+|++ |++++.||.|+||++.
T Consensus 661 ~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 661 KVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred eeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 237899999985 9999999999999985
No 41
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5e-35 Score=290.73 Aligned_cols=274 Identities=16% Similarity=0.223 Sum_probs=224.7
Q ss_pred cCC-ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 209 NNS-RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 209 h~~-~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
|.. .|++++|+|+|+ +|++|+.|++|+|||+...... .......+|...|.+++|
T Consensus 14 h~~~~v~~l~~sp~g~-~las~~~D~~i~iw~~~~~~~~-----------------------~~~~~~~~h~~~v~~~~~ 69 (345)
T 3fm0_A 14 HPDSRCWFLAWNPAGT-LLASCGGDRRIRIWGTEGDSWI-----------------------CKSVLSEGHQRTVRKVAW 69 (345)
T ss_dssp STTSCEEEEEECTTSS-CEEEEETTSCEEEEEEETTEEE-----------------------EEEEECSSCSSCEEEEEE
T ss_pred CCCCcEEEEEECCCCC-EEEEEcCCCeEEEEEcCCCcce-----------------------eeeeeccccCCcEEEEEE
Confidence 766 999999999999 9999999999999998742100 011122568899999999
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCc--eEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC---eEEEEeecC
Q 009715 288 STDGTYLATVGRDGYLRVFDYSKE--QLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDR---KVVAWGEGH 362 (528)
Q Consensus 288 spdg~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~---~~~~~~~~h 362 (528)
+|++++|++++.|+.+++||+.++ +++..+.+|...|.+++|+|++++|++|+.|+.|++||++++ +++..+.+|
T Consensus 70 sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h 149 (345)
T 3fm0_A 70 SPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSH 149 (345)
T ss_dssp CTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCC
T ss_pred CCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCc
Confidence 999999999999999999999876 457788899999999999999999999999999999999875 456778899
Q ss_pred CCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeE--EEEeec-CCCCCCCeecCCCCCccCCceee
Q 009715 363 NSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEI--VVPLRR-GPLGGSPTFSTGSQSAHWDNVCP 439 (528)
Q Consensus 363 ~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~--~~~~~~-~~~~~~~~~s~~~~~~~~d~~~~ 439 (528)
...|.+++|+| ++ .+|++++.|+.|++||++.++. ...+.. ...+..++|++++ ..+.
T Consensus 150 ~~~v~~~~~~p-------~~------~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g------~~l~ 210 (345)
T 3fm0_A 150 TQDVKHVVWHP-------SQ------ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSG------QRLA 210 (345)
T ss_dssp CSCEEEEEECS-------SS------SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTS------SEEE
T ss_pred CCCeEEEEECC-------CC------CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCC------CEEE
Confidence 99999999999 88 6899999999999999998864 344443 3456778888876 5678
Q ss_pred eecCCCCceeeecCCC---------------CceEEeec-CCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCcc----
Q 009715 440 VGTLQPAPSMRDVPKL---------------SPLVAHRV-HTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAE---- 497 (528)
Q Consensus 440 ~g~~~~~~~~~d~~~~---------------~~~~~~~~-h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~---- 497 (528)
.++.++.+++|+.... +.+..+.+ |...|.+++|+|+. |++++.|+.|++|+......
T Consensus 211 s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~ 290 (345)
T 3fm0_A 211 SCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQP 290 (345)
T ss_dssp EEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSC
T ss_pred EEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCccee
Confidence 8889999999986321 12334444 88999999999974 99999999999999865431
Q ss_pred -------ccCCCccce--EEEccCC-ceEEEeeeeccc
Q 009715 498 -------SQSSSSETV--LSTSSKD-KPLLSSKVVTSS 525 (528)
Q Consensus 498 -------~~~~~~~~v--l~~spd~-~~l~s~~~~gs~ 525 (528)
....|...| ++|+|++ ++|++++.+|.+
T Consensus 291 ~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v 328 (345)
T 3fm0_A 291 TFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEV 328 (345)
T ss_dssp CEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred eEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcE
Confidence 123577778 8899998 489999888765
No 42
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-34 Score=288.34 Aligned_cols=295 Identities=16% Similarity=0.196 Sum_probs=244.2
Q ss_pred CCCCceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCCCCCCCeEEEEe
Q 009715 96 TGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKDAKDGHDLLIGL 175 (528)
Q Consensus 96 ~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~~~~~~~l~~g~ 175 (528)
.++..+...|.||.+.|+++.|+| ++++|++|+
T Consensus 19 ~G~~~~~~~l~~h~~~v~~~~~s~-----------------------------------------------~~~~l~~~~ 51 (369)
T 3zwl_B 19 QGSHMKAIKLTGHERPLTQVKYNK-----------------------------------------------EGDLLFSCS 51 (369)
T ss_dssp SCCSEEEEEEECCSSCEEEEEECT-----------------------------------------------TSCEEEEEE
T ss_pred eccccccEEEEEeeceEEEEEEcC-----------------------------------------------CCCEEEEEe
Confidence 344556677889999998888866 344677788
Q ss_pred cCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccc
Q 009715 176 NSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKD 255 (528)
Q Consensus 176 ~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~ 255 (528)
.||.|++||+... +.. .....|...|++++|+|+++ +|++++.||.|++||+.+.
T Consensus 52 ~dg~i~vwd~~~~-----~~~-------~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~------------ 106 (369)
T 3zwl_B 52 KDSSASVWYSLNG-----ERL-------GTLDGHTGTIWSIDVDCFTK-YCVTGSADYSIKLWDVSNG------------ 106 (369)
T ss_dssp SSSCEEEEETTTC-----CEE-------EEECCCSSCEEEEEECTTSS-EEEEEETTTEEEEEETTTC------------
T ss_pred CCCEEEEEeCCCc-----hhh-------hhhhhcCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC------------
Confidence 8899999998752 111 11123889999999999999 9999999999999999752
Q ss_pred cceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCC-----CcEEEEecCCce-----------EEeeecc
Q 009715 256 QTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRD-----GYLRVFDYSKEQ-----------LICGGKS 319 (528)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~d-----g~i~vwd~~~~~-----------~~~~~~~ 319 (528)
..+..+. |...|.+++|+|++++|++++.+ +.|++||+.... .+..+..
T Consensus 107 --------------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 171 (369)
T 3zwl_B 107 --------------QCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIIT 171 (369)
T ss_dssp --------------CEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEEC
T ss_pred --------------cEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccC
Confidence 2334444 67899999999999999999999 999999997542 2233344
Q ss_pred cCC--CeEEEEEcCCCCEEEEEeCCCcEEEEECCC-CeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeC
Q 009715 320 YYG--ALLCCAWSMDGKYILTGGEDDLVQVWSMED-RKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQ 396 (528)
Q Consensus 320 ~~~--~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~-~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~ 396 (528)
|.. .+.+++|+|++++|++++.|+.|++||+++ .+.+..+..|...|.+++|+| ++ .+|++++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-------~~------~~l~~~~~ 238 (369)
T 3zwl_B 172 HEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSP-------DL------TYFITSSR 238 (369)
T ss_dssp CTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECT-------TS------SEEEEEET
T ss_pred CcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECC-------CC------CEEEEecC
Confidence 555 899999999999999999999999999999 788899999999999999999 88 68999999
Q ss_pred CCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCC--------------CceeeecCCCCceEEee
Q 009715 397 DTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQP--------------APSMRDVPKLSPLVAHR 462 (528)
Q Consensus 397 D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~--------------~~~~~d~~~~~~~~~~~ 462 (528)
|+.|++||+++++.+..+........+.+++++. .+.++..++ .+.+||....+++..+.
T Consensus 239 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 312 (369)
T 3zwl_B 239 DTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKE------FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQ 312 (369)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCEEEEEECSSSS------EEEEEECCC-------------CEEEEEETTTCCEEEEEE
T ss_pred CceEEEEECCCCceeeeecCCCCceeEEecCCCc------eEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhee
Confidence 9999999999999999998777777888888773 333333333 68999999999999999
Q ss_pred cCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCc
Q 009715 463 VHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVA 496 (528)
Q Consensus 463 ~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~ 496 (528)
+|...|.+++|+|++ |++++.||.|++|++..+.
T Consensus 313 ~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 313 GHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEECcccc
Confidence 999999999999984 9999999999999987643
No 43
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.7e-34 Score=285.17 Aligned_cols=282 Identities=16% Similarity=0.202 Sum_probs=224.9
Q ss_pred ccCCceeEEEE-----ee-CCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCC
Q 009715 208 VNNSRCTSVTW-----VP-GGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGS 281 (528)
Q Consensus 208 ~h~~~v~~l~~-----~p-~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 281 (528)
.|...|++++| ++ +++ +|++|+.|++|++||+........ ...+...+.+|...
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~-~l~sgs~D~~v~iWd~~~~~~~~~-------------------~~~~~~~l~~h~~~ 78 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSP-VLISGSRDKTVMIWKLYEEEQNGY-------------------FGIPHKALTGHNHF 78 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCC-EEEEEETTSCEEEEEECSSCCSSB-------------------SEEEEEEECCCSSC
T ss_pred cchhhhhheeeEEEeecCCCCC-EEEEEcCCCEEEEEECCcCCcccc-------------------cccccchhccCCCc
Confidence 49999999999 66 777 999999999999999875321100 01245667889999
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee-
Q 009715 282 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGE- 360 (528)
Q Consensus 282 v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~- 360 (528)
|.+++|+|++.+|++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+... ......
T Consensus 79 V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~ 157 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAE 157 (343)
T ss_dssp EEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCT
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeec
Confidence 999999999999999999999999999999999999999999999999999999999999999999999844 333333
Q ss_pred --cCCCCeEEEEEecCCCCCCCCCCcc----ceeEEEEEEeCCCeEEEEEccCCeEEEEeec-CCCCCCCeecCCCCCcc
Q 009715 361 --GHNSWVSGVAFDSYWSQPNSDGTAE----TVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR-GPLGGSPTFSTGSQSAH 433 (528)
Q Consensus 361 --~h~~~V~~v~f~p~~~~~~~dg~~~----~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~ 433 (528)
+|...|.+++|+| ++... ....+|++++.|+.|++||. ..+....+.. ...+..+.|++++
T Consensus 158 ~~~~~~~v~~~~~~~-------~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g---- 225 (343)
T 2xzm_R 158 KENHSDWVSCVRYSP-------IMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNG---- 225 (343)
T ss_dssp TTSCSSCEEEEEECC-------CCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTS----
T ss_pred ccCCCceeeeeeecc-------ccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCC----
Confidence 7999999999998 54100 00147999999999999994 4555555543 3456778888887
Q ss_pred CCceeeeecCCCCceeeecCCC-CceEEeecCCCCeEEEEEeCCe-EEEEECCCeEEEEeCCCCcccc------------
Q 009715 434 WDNVCPVGTLQPAPSMRDVPKL-SPLVAHRVHTEPLSGLIFTQES-VLTVCREGHIKIWMRPGVAESQ------------ 499 (528)
Q Consensus 434 ~d~~~~~g~~~~~~~~~d~~~~-~~~~~~~~h~~~V~~l~~s~d~-l~t~s~Dg~i~iW~~~~~~~~~------------ 499 (528)
..+..++.++.+++||+... .+...+ .+...|.+++|+|++ +++++.|+.|++|++.......
T Consensus 226 --~~l~sgs~dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~ 302 (343)
T 2xzm_R 226 --KYIATGGKDKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKA 302 (343)
T ss_dssp --SEEEEEETTCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGB
T ss_pred --CEEEEEcCCCeEEEEECCCCcccceee-cCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhh
Confidence 56788999999999999544 344443 456679999999985 7778889999999987654221
Q ss_pred ---CCCccce--EEEccCCceEEEeeeeccc
Q 009715 500 ---SSSSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 500 ---~~~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
..|...+ ++|+|+|++|++|+.+|.+
T Consensus 303 ~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v 333 (343)
T 2xzm_R 303 EGQKGKNPQCTSLAWNALGKKLFAGFTDGVI 333 (343)
T ss_dssp TTBCCSCCCEEEEEECSSSCCEEEEETTSEE
T ss_pred hhhcCCCCceEEEEECCCCCeEEEecCCceE
Confidence 1455556 8899999999999988765
No 44
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-35 Score=324.33 Aligned_cols=369 Identities=13% Similarity=0.069 Sum_probs=255.6
Q ss_pred CCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC-----CCCCCeEEEEecCCcE
Q 009715 106 GGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD-----AKDGHDLLIGLNSGDV 180 (528)
Q Consensus 106 ~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~-----~~~~~~l~~g~~~G~v 180 (528)
.||.+.|++++|+| ++.++++++. ||.+.+|+......+..+...... ++ +++|++++.|+.|
T Consensus 14 ~gh~~~V~~lafsp-dg~~lAsgs~----------Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v 81 (902)
T 2oaj_A 14 YGMSSKPIAAAFDF-TQNLLAIATV----------TGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTV 81 (902)
T ss_dssp EECSSCEEEEEEET-TTTEEEEEET----------TSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEE
T ss_pred cCCCCCcEEEEECC-CCCEEEEEeC----------CCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeE
Confidence 49999999999999 6777777775 789999987766555444432211 56 7789999999999
Q ss_pred EEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeE
Q 009715 181 YSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFS 260 (528)
Q Consensus 181 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 260 (528)
++||+.+. +. ..... |...|++++|+|+++ +|++|+.||.|++||+..... ..+ .
T Consensus 82 ~lWd~~~~-----~~-~~~~~-------~~~~V~~v~~sp~g~-~l~sgs~dg~V~lwd~~~~~~--~~~---------~ 136 (902)
T 2oaj_A 82 YVLSLYSQ-----KV-LTTVF-------VPGKITSIDTDASLD-WMLIGLQNGSMIVYDIDRDQL--SSF---------K 136 (902)
T ss_dssp EEEETTTC-----SE-EEEEE-------CSSCEEEEECCTTCS-EEEEEETTSCEEEEETTTTEE--EEE---------E
T ss_pred EEEECCCC-----cE-EEEEc-------CCCCEEEEEECCCCC-EEEEEcCCCcEEEEECCCCcc--ccc---------e
Confidence 99999862 11 11111 667899999999999 999999999999999975211 000 0
Q ss_pred EeccCCCCCCCeEEEeecCCCeEEEEECCC-CCEEEEEeCCCcEEEEecCCceEEeeeccc------------------C
Q 009715 261 VAHPRYSKSNPIARWHICQGSINSIAFSTD-GTYLATVGRDGYLRVFDYSKEQLICGGKSY------------------Y 321 (528)
Q Consensus 261 ~~~~~~~~~~~~~~~~~h~~~v~~l~~spd-g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~------------------~ 321 (528)
+... ........+|.+.|.+++|+|+ +..|++++.|+.| +||+++++.+..+..| .
T Consensus 137 i~~~----~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~ 211 (902)
T 2oaj_A 137 LDNL----QKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRT 211 (902)
T ss_dssp ECCH----HHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBC
T ss_pred eccc----cccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccC
Confidence 0000 0000112568899999999995 5789999999999 9999999988777655 4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE--e---ec-------------CCCCeEEEEEecCCCCCCCCCC
Q 009715 322 GALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAW--G---EG-------------HNSWVSGVAFDSYWSQPNSDGT 383 (528)
Q Consensus 322 ~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~--~---~~-------------h~~~V~~v~f~p~~~~~~~dg~ 383 (528)
..|.+++|+|+|++|++++.|+.|++||+++++++.. + .. |...|.+++|++...+ |+.
T Consensus 212 ~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~p---d~~ 288 (902)
T 2oaj_A 212 PKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNP---EYT 288 (902)
T ss_dssp CCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSST---TEE
T ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCC---CCC
Confidence 7799999999999999999999999999999887653 2 12 3457999999651100 210
Q ss_pred ccceeEEE------------------------------------------------------------------------
Q 009715 384 AETVMYRF------------------------------------------------------------------------ 391 (528)
Q Consensus 384 ~~~~~~~l------------------------------------------------------------------------ 391 (528)
.+|
T Consensus 289 -----~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d 363 (902)
T 2oaj_A 289 -----SLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHN 363 (902)
T ss_dssp -----EEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBS
T ss_pred -----EEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCC
Confidence 233
Q ss_pred ----EEEeCCCeEEEEEccCCeEEEEe-------e-cCCCCCCCeecC---------------------CCCCc------
Q 009715 392 ----GSVGQDTRLLLWDLEMDEIVVPL-------R-RGPLGGSPTFST---------------------GSQSA------ 432 (528)
Q Consensus 392 ----~s~s~D~~i~lwd~~~~~~~~~~-------~-~~~~~~~~~~s~---------------------~~~~~------ 432 (528)
++.+.|+.|++||+.++...... . +...+..++|+. +....
T Consensus 364 ~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~ 443 (902)
T 2oaj_A 364 PGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLP 443 (902)
T ss_dssp CSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCC
T ss_pred ceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccc
Confidence 34444555555555444322110 0 000111111110 00000
Q ss_pred cC-CceeeeecCCCCceeeecCCCCce----EEe--e-----cCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCc--
Q 009715 433 HW-DNVCPVGTLQPAPSMRDVPKLSPL----VAH--R-----VHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVA-- 496 (528)
Q Consensus 433 ~~-d~~~~~g~~~~~~~~~d~~~~~~~----~~~--~-----~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~-- 496 (528)
.. ...+..++.|+.+++||+...... ... . +|...|.+|+|+||+ |++|+.||+|+||++.+.+
T Consensus 444 spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~ 523 (902)
T 2oaj_A 444 AEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFY 523 (902)
T ss_dssp CSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC-
T ss_pred cccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCcccc
Confidence 01 135688999999999999776421 111 1 799999999999985 9999999999999987552
Q ss_pred ---------------------------------------------cccCCCccce--EEEccCCceEEEeeeeccc
Q 009715 497 ---------------------------------------------ESQSSSSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 497 ---------------------------------------------~~~~~~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
.....|.+.| ++||||| +||+|+.++++
T Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv 598 (902)
T 2oaj_A 524 SVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSL 598 (902)
T ss_dssp --------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEE
T ss_pred CccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcE
Confidence 1123577778 8899999 99999888754
No 45
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-35 Score=296.58 Aligned_cols=311 Identities=13% Similarity=0.149 Sum_probs=252.6
Q ss_pred CCCCC-eEEEEecCCcEEEEEc----cccccccccceeeeeeeccCC------cccCCceeEEEEeeCCCcEEEEEeCCc
Q 009715 165 AKDGH-DLLIGLNSGDVYSVSL----RQQLQDVGKKLVGAHHYNKDG------SVNNSRCTSVTWVPGGDGAFVVGHADG 233 (528)
Q Consensus 165 ~~~~~-~l~~g~~~G~v~iwd~----~~~~~~~~~~~~~~~~~~~~~------~~h~~~v~~l~~~p~g~~~l~tg~~dg 233 (528)
+++++ +|++|+.||.|++||+ ...... -.+.....+.... ..|...|++++|+|+++ +|++++.||
T Consensus 54 s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg 130 (425)
T 1r5m_A 54 NPLDESILAYGEKNSVARLARIVETDQEGKKY--WKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN-SIVTGVENG 130 (425)
T ss_dssp CSSCTTEEEEEETBTEEEEEEEEEC------C--EEEEEEEEEECCCCCC------CBCEEEEEECTTSS-EEEEEETTS
T ss_pred CCCCCcEEEEecCCceEEEEEEecccCCcccc--ccccccccccccccccccccCCCCceEEEEEcCCCC-EEEEEeCCC
Confidence 78999 9999999999999999 541100 0000001111111 12678999999999999 999999999
Q ss_pred eEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceE
Q 009715 234 NLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQL 313 (528)
Q Consensus 234 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~ 313 (528)
.|++|+.. ...+..+..|...|.+++|+|++++|++++.|+.|++||+.+++.
T Consensus 131 ~i~i~~~~---------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 183 (425)
T 1r5m_A 131 ELRLWNKT---------------------------GALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTV 183 (425)
T ss_dssp CEEEEETT---------------------------SCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE
T ss_pred eEEEEeCC---------------------------CCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE
Confidence 99999933 235666778899999999999999999999999999999999999
Q ss_pred EeeecccCCC---------------eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCC
Q 009715 314 ICGGKSYYGA---------------LLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQP 378 (528)
Q Consensus 314 ~~~~~~~~~~---------------v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~ 378 (528)
+..+..+... +.+++|+|++ .+++++.|+.|++||+++++.+..+..|...|.+++|+|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~----- 257 (425)
T 1r5m_A 184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND----- 257 (425)
T ss_dssp EEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET-----
T ss_pred EEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC-----
Confidence 9888877766 9999999986 588899999999999999999999999999999999999
Q ss_pred CCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec-CCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCc
Q 009715 379 NSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR-GPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSP 457 (528)
Q Consensus 379 ~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~ 457 (528)
++ .+|++++.|+.|++||+++++.+..+.. ...+..+.|++++ .+..+..++.+++||+...++
T Consensus 258 --~~------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-------~l~~~~~d~~i~i~d~~~~~~ 322 (425)
T 1r5m_A 258 --TN------KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-------KVISCSMDGSVRLWSLKQNTL 322 (425)
T ss_dssp --TT------TEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-------EEEEEETTSEEEEEETTTTEE
T ss_pred --CC------CEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-------EEEEEeCCCcEEEEECCCCcE
Confidence 88 6899999999999999999888777753 3455666776653 667888899999999999999
Q ss_pred eEEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCc----------------------cccCCCcc--ce--EEE
Q 009715 458 LVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVA----------------------ESQSSSSE--TV--LST 509 (528)
Q Consensus 458 ~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~----------------------~~~~~~~~--~v--l~~ 509 (528)
+..+..|...|.+++|+|++ |++++.||.|++|++.... .....|.. .| ++|
T Consensus 323 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 402 (425)
T 1r5m_A 323 LALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSW 402 (425)
T ss_dssp EEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEE
T ss_pred eEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEc
Confidence 99999999999999999974 9999999999999987554 12234543 66 889
Q ss_pred ccCCceEEEeeeecccc
Q 009715 510 SSKDKPLLSSKVVTSSY 526 (528)
Q Consensus 510 spd~~~l~s~~~~gs~~ 526 (528)
+||+++|++++.+|.++
T Consensus 403 s~~~~~l~~~~~dg~i~ 419 (425)
T 1r5m_A 403 NCAGNKISVAYSLQEGS 419 (425)
T ss_dssp CTTSSEEEEEESSSCCE
T ss_pred cCCCceEEEEecCceEE
Confidence 99999999999887653
No 46
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.6e-34 Score=289.80 Aligned_cols=282 Identities=18% Similarity=0.224 Sum_probs=217.4
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeee-------eee-ccCCcccCCceeEEEEeeCCCcEEEEEeCCceEE
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGA-------HHY-NKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLY 236 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~-------~~~-~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~ 236 (528)
++++++|++|. ++.+++|++...... ..+... ..+ ......+...|++++|+|+++ +|++|+.|+.|+
T Consensus 73 spdg~~la~g~-~~~v~i~~~~~g~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~-~l~s~~~d~~i~ 148 (393)
T 1erj_A 73 SNDGEYLATGC-NKTTQVYRVSDGSLV--ARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK-FLATGAEDRLIR 148 (393)
T ss_dssp CTTSSEEEEEC-BSCEEEEETTTCCEE--EEECC-----------------CCCCBEEEEEECTTSS-EEEEEETTSCEE
T ss_pred CCCCCEEEEEc-CCcEEEEEecCCCEE--EEecCccccccccccccccccCCCceeEEEEEECCCCC-EEEEEcCCCeEE
Confidence 78999998876 689999998752110 000000 000 000011334599999999999 999999999999
Q ss_pred EEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEee
Q 009715 237 VYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICG 316 (528)
Q Consensus 237 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~ 316 (528)
|||+.+ ...+..+.+|...|.+++|+|++.+|++++.|+.|++||++++++...
T Consensus 149 iwd~~~--------------------------~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 149 IWDIEN--------------------------RKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT 202 (393)
T ss_dssp EEETTT--------------------------TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEECCC--------------------------CcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEE
Confidence 999875 234567788999999999999999999999999999999999998877
Q ss_pred ecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEe-------ecCCCCeEEEEEecCCCCCCCCCCcccee
Q 009715 317 GKSYYGALLCCAWSM-DGKYILTGGEDDLVQVWSMEDRKVVAWG-------EGHNSWVSGVAFDSYWSQPNSDGTAETVM 388 (528)
Q Consensus 317 ~~~~~~~v~~l~~sp-~g~~l~sg~~dg~v~vwd~~~~~~~~~~-------~~h~~~V~~v~f~p~~~~~~~dg~~~~~~ 388 (528)
+. +...+.+++|+| ++++|++|+.|+.|++||+++++.+..+ .+|...|.+++|+| +|
T Consensus 203 ~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-------~g------ 268 (393)
T 1erj_A 203 LS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-------DG------ 268 (393)
T ss_dssp EE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-------TS------
T ss_pred EE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-------CC------
Confidence 65 567899999999 8999999999999999999999887776 57999999999999 98
Q ss_pred EEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCe
Q 009715 389 YRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPL 468 (528)
Q Consensus 389 ~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V 468 (528)
.+|++++.|+.|++||++.......... .........+.+|...|
T Consensus 269 ~~l~s~s~d~~v~~wd~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~h~~~v 313 (393)
T 1erj_A 269 QSVVSGSLDRSVKLWNLQNANNKSDSKT-----------------------------------PNSGTCEVTYIGHKDFV 313 (393)
T ss_dssp SEEEEEETTSEEEEEEC--------------------------------------------------CEEEEEECCSSCE
T ss_pred CEEEEEeCCCEEEEEECCCCCCcccccC-----------------------------------CCCCcceEEEecccCcE
Confidence 6899999999999999987554321110 01122445677899999
Q ss_pred EEEEEeCC--eEEEEECCCeEEEEeCCCCccc--cCCCccce--EEEc------cCCceEEEeeeeccc
Q 009715 469 SGLIFTQE--SVLTVCREGHIKIWMRPGVAES--QSSSSETV--LSTS------SKDKPLLSSKVVTSS 525 (528)
Q Consensus 469 ~~l~~s~d--~l~t~s~Dg~i~iW~~~~~~~~--~~~~~~~v--l~~s------pd~~~l~s~~~~gs~ 525 (528)
.+++|+|+ .|++++.|+.|++||+..+... ...|...| ++++ |++++|++++.+|.+
T Consensus 314 ~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i 382 (393)
T 1erj_A 314 LSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKA 382 (393)
T ss_dssp EEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcE
Confidence 99999997 4999999999999999877633 34688888 5555 478999999988764
No 47
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.7e-35 Score=296.27 Aligned_cols=308 Identities=13% Similarity=0.072 Sum_probs=243.6
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
+++++.|++|+.||.|++||+.... .......| ..+....|+|++. +|++|+.||.|++||+...
T Consensus 65 s~~g~~l~~~~~d~~v~i~d~~~~~------------~~~~~~~~-~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~- 129 (420)
T 3vl1_A 65 EKVGSHLYKARLDGHDFLFNTIIRD------------GSKMLKRA-DYTAVDTAKLQMR-RFILGTTEGDIKVLDSNFN- 129 (420)
T ss_dssp EEEETTEEEEEETTEEEEEECCSEE------------TTTTSCSC-CEEEEEEECSSSC-EEEEEETTSCEEEECTTSC-
T ss_pred eecCCeEEEEEcCCcEEEEEecccc------------eeeEEecC-CceEEEEEecCCC-EEEEEECCCCEEEEeCCCc-
Confidence 6889999999999999999987621 11111113 3445557899998 9999999999999998741
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCe
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGAL 324 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v 324 (528)
..+..+..|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|
T Consensus 130 -------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v 184 (420)
T 3vl1_A 130 -------------------------LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATV 184 (420)
T ss_dssp -------------------------EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCE
T ss_pred -------------------------ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcE
Confidence 2344456788999999999999999999999999999999999988899999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec---CCCCeEEEEEecCCC--------------CCCCCCCccce
Q 009715 325 LCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEG---HNSWVSGVAFDSYWS--------------QPNSDGTAETV 387 (528)
Q Consensus 325 ~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~---h~~~V~~v~f~p~~~--------------~~~~dg~~~~~ 387 (528)
.+++|+|++++|++++.|+.|++||+++++++..+.. |...|.+++|.|.-. ..+++|
T Consensus 185 ~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~----- 259 (420)
T 3vl1_A 185 TDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG----- 259 (420)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT-----
T ss_pred EEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC-----
Confidence 9999999999999999999999999999999888874 556677777643100 001277
Q ss_pred eEEEEEEeCCCeEEEEEccCCeEEEEeecC--CCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCC-ceEEeec-
Q 009715 388 MYRFGSVGQDTRLLLWDLEMDEIVVPLRRG--PLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLS-PLVAHRV- 463 (528)
Q Consensus 388 ~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~-~~~~~~~- 463 (528)
.+|++++.|+.|++||+++++.+..+... ..+..+.|++++. ..+..++.++.+++||++..+ ++..+..
T Consensus 260 -~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~ 333 (420)
T 3vl1_A 260 -KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNA-----NYIYAGYENGMLAQWDLRSPECPVGEFLIN 333 (420)
T ss_dssp -EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCT-----TEEEEEETTSEEEEEETTCTTSCSEEEEES
T ss_pred -CEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCC-----CEEEEEeCCCeEEEEEcCCCcCchhhhhcc
Confidence 79999999999999999999888777543 3566778877762 267889999999999999874 4777776
Q ss_pred CCCCeEEEEEeCC-eEEEEECCCeEEEEeCCCCcc-----------ccCCCccce--EEEccCCc---eEEEeeeec
Q 009715 464 HTEPLSGLIFTQE-SVLTVCREGHIKIWMRPGVAE-----------SQSSSSETV--LSTSSKDK---PLLSSKVVT 523 (528)
Q Consensus 464 h~~~V~~l~~s~d-~l~t~s~Dg~i~iW~~~~~~~-----------~~~~~~~~v--l~~spd~~---~l~s~~~~g 523 (528)
|...|.++.|.+. .|++++.|+.|++|++..... ....+...+ ++|+||++ .|++.+..|
T Consensus 334 ~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g 410 (420)
T 3vl1_A 334 EGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNN 410 (420)
T ss_dssp TTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTT
T ss_pred CCCCceEEEeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCc
Confidence 6778999977765 499999999999999876321 222455555 88999999 555554444
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-34 Score=295.08 Aligned_cols=314 Identities=14% Similarity=0.162 Sum_probs=243.6
Q ss_pred CCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC-----CCCCCeEEEEecCCcEEEEEc
Q 009715 111 GSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD-----AKDGHDLLIGLNSGDVYSVSL 185 (528)
Q Consensus 111 ~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~-----~~~~~~l~~g~~~G~v~iwd~ 185 (528)
.+++++|+| ++.++++++. ++.+.+|+.........+...... +++++.|++|+.+|.|++||+
T Consensus 58 ~~~~~~~s~-~g~~l~~~~~----------d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 126 (420)
T 3vl1_A 58 AGKGNTFEK-VGSHLYKARL----------DGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDS 126 (420)
T ss_dssp CCTTCEEEE-EETTEEEEEE----------TTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECT
T ss_pred cccceeeee-cCCeEEEEEc----------CCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeC
Confidence 345788888 5555555553 677777776554322222222111 789999999999999999998
Q ss_pred cccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccC
Q 009715 186 RQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPR 265 (528)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (528)
.... .......|...|++++|+|+++ +|++++.||.|++||+...
T Consensus 127 ~~~~------------~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~---------------------- 171 (420)
T 3vl1_A 127 NFNL------------QREIDQAHVSEITKLKFFPSGE-ALISSSQDMQLKIWSVKDG---------------------- 171 (420)
T ss_dssp TSCE------------EEEETTSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTC----------------------
T ss_pred CCcc------------eeeecccccCccEEEEECCCCC-EEEEEeCCCeEEEEeCCCC----------------------
Confidence 7521 1111224999999999999999 9999999999999999752
Q ss_pred CCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecc---cC---------------------
Q 009715 266 YSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKS---YY--------------------- 321 (528)
Q Consensus 266 ~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~---~~--------------------- 321 (528)
..+..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+.. +.
T Consensus 172 ----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 247 (420)
T 3vl1_A 172 ----SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEIST 247 (420)
T ss_dssp ----CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCC
T ss_pred ----cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeeccc
Confidence 34567788999999999999999999999999999999999998888764 33
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee-cCCCCeEEEEEecCCCCCCCCCCccceeE-EEEEEeCCCe
Q 009715 322 GALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGE-GHNSWVSGVAFDSYWSQPNSDGTAETVMY-RFGSVGQDTR 399 (528)
Q Consensus 322 ~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~-~h~~~V~~v~f~p~~~~~~~dg~~~~~~~-~l~s~s~D~~ 399 (528)
..+.+++|+|++++|++++.|+.|++||+++++.+..+. .|...|.+++|+| ++ . +|++++.|+.
T Consensus 248 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-------~~------~~~l~~g~~dg~ 314 (420)
T 3vl1_A 248 SKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDG-------NN------ANYIYAGYENGM 314 (420)
T ss_dssp CCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECS-------SC------TTEEEEEETTSE
T ss_pred CcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeC-------CC------CCEEEEEeCCCe
Confidence 344445567899999999999999999999988776664 5889999999999 87 5 8999999999
Q ss_pred EEEEEccCCeE-EEEeec--CCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCC---------CceEEeecCCCC
Q 009715 400 LLLWDLEMDEI-VVPLRR--GPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKL---------SPLVAHRVHTEP 467 (528)
Q Consensus 400 i~lwd~~~~~~-~~~~~~--~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~---------~~~~~~~~h~~~ 467 (528)
|++||+++++. +..+.. ...+..+.+ +++ ..+..++.++.+++|++... .....+..|...
T Consensus 315 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~------~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (420)
T 3vl1_A 315 LAQWDLRSPECPVGEFLINEGTPINNVYF-AAG------ALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDA 387 (420)
T ss_dssp EEEEETTCTTSCSEEEEESTTSCEEEEEE-ETT------EEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCC
T ss_pred EEEEEcCCCcCchhhhhccCCCCceEEEe-CCC------CEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcc
Confidence 99999998754 555543 233333433 232 46678888999999998763 334456688999
Q ss_pred eEEEEEeCC-----eEEEEECCCeEEEEeCCC
Q 009715 468 LSGLIFTQE-----SVLTVCREGHIKIWMRPG 494 (528)
Q Consensus 468 V~~l~~s~d-----~l~t~s~Dg~i~iW~~~~ 494 (528)
|.+++|+|+ .|++++.+|.+++|++..
T Consensus 388 v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 388 VSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred eEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 999999996 289999999999999864
No 49
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-34 Score=290.37 Aligned_cols=318 Identities=14% Similarity=0.146 Sum_probs=238.8
Q ss_pred hcCCCCCceeecc-CCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCCCCCCCeE
Q 009715 93 LLGTGNGSRTLGF-GGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKDAKDGHDL 171 (528)
Q Consensus 93 ~~~~~~g~~~~sf-~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~~~~~~~l 171 (528)
.|. ..|..+..| .+|.+.|++++|+| .++.+|
T Consensus 47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~----------------------------------------------~~~~~l 79 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEPNSITSSAVSP----------------------------------------------GETPYL 79 (437)
T ss_dssp GGG-CCCCEEEEECTTTTSCEEEEEEEC----------------------------------------------SSSCEE
T ss_pred ccc-ccceEEeeeccCCCCceEEEEECC----------------------------------------------CCCCEE
Confidence 476 456666777 78888887777754 256688
Q ss_pred EEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCC--CCCCCc
Q 009715 172 LIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKD--GAGDSS 249 (528)
Q Consensus 172 ~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~--~~~~~~ 249 (528)
++|+.||.|++||+....... .......+ .|...|++++|+|++. +|++++.||.|++||+... +.....
T Consensus 80 ~s~s~dg~v~vwd~~~~~~~~--~~~~~~~~-----~h~~~v~~~~~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~ 151 (437)
T 3gre_A 80 ITGSDQGVIKIWNLKEIIVGE--VYSSSLTY-----DCSSTVTQITMIPNFD-AFAVSSKDGQIIVLKVNHYQQESEVKF 151 (437)
T ss_dssp EEEETTSEEEEEEHHHHHTTC--CCSCSEEE-----ECSSCEEEEEECTTSS-EEEEEETTSEEEEEEEEEEEETTEEEE
T ss_pred EEecCCceEEEeECcccccCc--ccceeeec-----cCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEEeccccCCceeec
Confidence 899999999999987622111 01001111 2889999999999998 9999999999999999521 111110
Q ss_pred cccccccceeEEeccCCCCCCCeEEEe--e--cCCCeEEEE--ECCCCCEEEEEeCCCcEEEEecCCceEEeeecc--cC
Q 009715 250 FPVIKDQTQFSVAHPRYSKSNPIARWH--I--CQGSINSIA--FSTDGTYLATVGRDGYLRVFDYSKEQLICGGKS--YY 321 (528)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--h~~~v~~l~--~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~ 321 (528)
+. ...+..+. . +...+.++. +++++.+|++++.|+.|++||+++++.+..+.. |.
T Consensus 152 ~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~ 214 (437)
T 3gre_A 152 LN-----------------CECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRH 214 (437)
T ss_dssp EE-----------------EEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGG
T ss_pred cc-----------------cceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCC
Confidence 00 01122222 1 456788888 668999999999999999999999999998887 88
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee-cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeE
Q 009715 322 GALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGE-GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRL 400 (528)
Q Consensus 322 ~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~-~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i 400 (528)
..|.+++|+|++++|++|+.|+.|++||+++++++..+. .|...|.+++|+|.+.+ ++ .+|++++.|+.|
T Consensus 215 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~---~~------~~l~s~~~dg~i 285 (437)
T 3gre_A 215 GAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGK---NS------VIVVGGSSKTFL 285 (437)
T ss_dssp CCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCT---TE------EEEEEESTTEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCC---Cc------cEEEEEcCCCcE
Confidence 999999999999999999999999999999999998886 78889999988874333 66 799999999999
Q ss_pred EEEEccCCeEEEEeecC-CCCCCCeecCCCC-------------------CccCCceeeeecCCCCceeeecCCCCceEE
Q 009715 401 LLWDLEMDEIVVPLRRG-PLGGSPTFSTGSQ-------------------SAHWDNVCPVGTLQPAPSMRDVPKLSPLVA 460 (528)
Q Consensus 401 ~lwd~~~~~~~~~~~~~-~~~~~~~~s~~~~-------------------~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~ 460 (528)
++||+++++++..+... ..+..+.|++++. ...-...+..++.++.+++||+...+.+..
T Consensus 286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~ 365 (437)
T 3gre_A 286 TIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKA 365 (437)
T ss_dssp EEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEE
T ss_pred EEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceE
Confidence 99999999998888753 2333344444321 001124578899999999999999888877
Q ss_pred eec-------------------------------------CCCCeEEEEEeCC----eEEEEECCCeEEEEe
Q 009715 461 HRV-------------------------------------HTEPLSGLIFTQE----SVLTVCREGHIKIWM 491 (528)
Q Consensus 461 ~~~-------------------------------------h~~~V~~l~~s~d----~l~t~s~Dg~i~iW~ 491 (528)
+.+ |...|++++|.++ .|++++.||.|+||+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 366 VISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 776 6777777777765 477777777777774
No 50
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.4e-33 Score=284.04 Aligned_cols=303 Identities=14% Similarity=0.063 Sum_probs=235.5
Q ss_pred hhhcCCCCCceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCCCCCC-C
Q 009715 91 AKLLGTGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKDAKDG-H 169 (528)
Q Consensus 91 ~~~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~~~~~-~ 169 (528)
..+|..........+.+|.+.|+++.|+| ++ +
T Consensus 55 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-----------------------------------------------~~~~ 87 (383)
T 3ei3_B 55 PFIRSLKSYKLHRTASPFDRRVTSLEWHP-----------------------------------------------THPT 87 (383)
T ss_dssp HHHHHHTTCEEEEEECCCSSCEEEEEECS-----------------------------------------------SCTT
T ss_pred cccccccccceEEeccCCCCCEEEEEECC-----------------------------------------------CCCC
Confidence 34455666777778889988888888766 23 5
Q ss_pred eEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEee-CCCcEEEEEeCCceEEEEEcCCCCCCCC
Q 009715 170 DLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVP-GGDGAFVVGHADGNLYVYEKSKDGAGDS 248 (528)
Q Consensus 170 ~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p-~g~~~l~tg~~dg~v~vwd~~~~~~~~~ 248 (528)
.|++|+.||.|++||+.... .. ..+ ....|...|.+++|+| ++. +|++++.|+.|++||+..
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~-----~~---~~~--~~~~h~~~v~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~------ 150 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQN-----KT---SFI--QGMGPGDAITGMKFNQFNTN-QLFVSSIRGATTLRDFSG------ 150 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTT-----CE---EEE--CCCSTTCBEEEEEEETTEEE-EEEEEETTTEEEEEETTS------
T ss_pred EEEEEcCCCeEEEEeCCCcc-----cc---eee--ecCCcCCceeEEEeCCCCCC-EEEEEeCCCEEEEEECCC------
Confidence 67888899999999987521 11 001 1123899999999999 556 999999999999999973
Q ss_pred ccccccccceeEEeccCCCCCCCeEEEe---ecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeE
Q 009715 249 SFPVIKDQTQFSVAHPRYSKSNPIARWH---ICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALL 325 (528)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 325 (528)
..+..+. .|...|.+++|+|++++|++++.|+.|++||+ +++.+..+..|...|.
T Consensus 151 ---------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~ 208 (383)
T 3ei3_B 151 ---------------------SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVT 208 (383)
T ss_dssp ---------------------CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEE
T ss_pred ---------------------CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEE
Confidence 1122222 23478999999999999999999999999999 4778888889999999
Q ss_pred EEEEcCCCC-EEEEEeCCCcEEEEECCC----CeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeE
Q 009715 326 CCAWSMDGK-YILTGGEDDLVQVWSMED----RKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRL 400 (528)
Q Consensus 326 ~l~~sp~g~-~l~sg~~dg~v~vwd~~~----~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i 400 (528)
+++|+|+++ +|++++.|+.|++||+++ ++++..+ +|...|.+++|+|. +| .+|++++.|+.|
T Consensus 209 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~------~~------~~l~~~~~d~~i 275 (383)
T 3ei3_B 209 HAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPT------DS------TKLLTTDQRNEI 275 (383)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTT------TS------CEEEEEESSSEE
T ss_pred EEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCC------CC------CEEEEEcCCCcE
Confidence 999999999 999999999999999998 6677666 59999999999983 55 689999999999
Q ss_pred EEEEccCCeEEEEeecCC-------CCCCCeecCCCCC----ccCCceeeeecCCCCceeeecCCCCceEEeec--CCCC
Q 009715 401 LLWDLEMDEIVVPLRRGP-------LGGSPTFSTGSQS----AHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRV--HTEP 467 (528)
Q Consensus 401 ~lwd~~~~~~~~~~~~~~-------~~~~~~~s~~~~~----~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~--h~~~ 467 (528)
++||+++++....+.... ......|++.+.. ...+..+ .++.++.+++||+.+.+++..+.+ |...
T Consensus 276 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~ 354 (383)
T 3ei3_B 276 RVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRDPNAAGI 354 (383)
T ss_dssp EEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEECBTTBCSC
T ss_pred EEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeecCCCCCce
Confidence 999999988766665321 1112234433320 1112223 677899999999999999999987 5677
Q ss_pred eEEEEEeCCe--EEEEECCCeEEEEeCCC
Q 009715 468 LSGLIFTQES--VLTVCREGHIKIWMRPG 494 (528)
Q Consensus 468 V~~l~~s~d~--l~t~s~Dg~i~iW~~~~ 494 (528)
+..++|+|++ |++++ |+.|+||++.+
T Consensus 355 ~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 355 ISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred EEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 8888999985 77886 99999999874
No 51
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-35 Score=296.48 Aligned_cols=345 Identities=14% Similarity=0.181 Sum_probs=262.3
Q ss_pred CCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcE---EEEeCCCCCCC-----CCCCCeEEEEecCCc
Q 009715 108 GNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAI---FISDLNSQDKD-----AKDGHDLLIGLNSGD 179 (528)
Q Consensus 108 h~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i---~v~~~~~~~~~-----~~~~~~l~~g~~~G~ 179 (528)
+...+.+++|+|....+++++.......++++.++.+.+|+..... .+..+...... ++++.+|++|+.||.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 3456889999993334777776555555556678888888876532 12222211111 889999999999999
Q ss_pred EEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeC-CCcEEEEEeCCceEEEEEcCCCCCCCCccccccccce
Q 009715 180 VYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPG-GDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQ 258 (528)
Q Consensus 180 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~-g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 258 (528)
|++||+...... ... ......|...|++++|+|+ +. +|++++.||.|++||+.........+.
T Consensus 91 v~vw~~~~~~~~--~~~------~~~~~~h~~~v~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~------- 154 (416)
T 2pm9_A 91 LELYSTNEANNA--INS------MARFSNHSSSVKTVKFNAKQDN-VLASGGNNGEIFIWDMNKCTESPSNYT------- 154 (416)
T ss_dssp EEEECCSSTTSC--CCE------EEECCCSSSCCCEEEECSSSTT-BEEEECSSSCEEBCBTTTTSSCTTTCC-------
T ss_pred EEEeeccccccc--ccc------hhhccCCccceEEEEEcCCCCC-EEEEEcCCCeEEEEECCCCcccccccc-------
Confidence 999999752111 001 1112238999999999999 56 999999999999999986431110000
Q ss_pred eEEeccCCCCCCCeEEEeecCCCeEEEEECCC-CCEEEEEeCCCcEEEEecCCceEEeeeccc------CCCeEEEEEcC
Q 009715 259 FSVAHPRYSKSNPIARWHICQGSINSIAFSTD-GTYLATVGRDGYLRVFDYSKEQLICGGKSY------YGALLCCAWSM 331 (528)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd-g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~------~~~v~~l~~sp 331 (528)
...+.....|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+ ...|.+++|+|
T Consensus 155 ----------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 155 ----------PLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp ----------CBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred ----------ccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence 0011123457789999999998 789999999999999999999998888766 78899999999
Q ss_pred CC-CEEEEEeCCC---cEEEEECCCC-eEEEEee-cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEc
Q 009715 332 DG-KYILTGGEDD---LVQVWSMEDR-KVVAWGE-GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDL 405 (528)
Q Consensus 332 ~g-~~l~sg~~dg---~v~vwd~~~~-~~~~~~~-~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~ 405 (528)
++ .+|++++.|+ .|++||++++ +++..+. +|...|.+++|+|. ++ .+|++++.|+.|++||+
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~------~~------~~l~s~~~dg~v~~wd~ 292 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQ------DE------HLLLSSGRDNTVLLWNP 292 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSS------CS------SCEEEEESSSEEEEECS
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCC------CC------CeEEEEeCCCCEEEeeC
Confidence 97 6899999998 9999999986 6777888 89999999999982 45 58999999999999999
Q ss_pred cCCeEEEEeec-CCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEee----------------------
Q 009715 406 EMDEIVVPLRR-GPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHR---------------------- 462 (528)
Q Consensus 406 ~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~---------------------- 462 (528)
++++.+..+.. ...+..+.|++++. ..+..++.++.+++|++..........
T Consensus 293 ~~~~~~~~~~~~~~~v~~~~~s~~~~-----~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (416)
T 2pm9_A 293 ESAEQLSQFPARGNWCFKTKFAPEAP-----DLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREES 367 (416)
T ss_dssp SSCCEEEEEECSSSCCCCEEECTTCT-----TEEEECCSSSEEEEEESCCCCCSSCC----------------------C
T ss_pred CCCccceeecCCCCceEEEEECCCCC-----CEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccc
Confidence 99999988875 35678888988752 356777788889999987655332211
Q ss_pred -------------cCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCC
Q 009715 463 -------------VHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGV 495 (528)
Q Consensus 463 -------------~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~ 495 (528)
.|..++.+++|+|++ |++++.|+.|+||++.++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 368 KEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred ccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 167788899999985 888899999999998764
No 52
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.3e-33 Score=282.68 Aligned_cols=323 Identities=16% Similarity=0.201 Sum_probs=246.3
Q ss_pred hhhhhhhcCCCCCceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCCCC
Q 009715 87 RSAAAKLLGTGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKDAK 166 (528)
Q Consensus 87 ~~~~~~~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~~~ 166 (528)
.....++|....+.....+.+|.+.|+++.|+| .
T Consensus 21 ~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~----------------------------------------------~ 54 (408)
T 4a11_B 21 AESTRRVLGLELNKDRDVERIHGGGINTLDIEP----------------------------------------------V 54 (408)
T ss_dssp HHHHHHHHTEEECTTEEECCCCSSCEEEEEECT----------------------------------------------T
T ss_pred ccCcceeeccccCcceeeeeccCCcEEEEEEec----------------------------------------------C
Confidence 366789999999988888999999998888865 2
Q ss_pred CCCeEEEEecCCcEEEEEccccccccccceeeee-eeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCC
Q 009715 167 DGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAH-HYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGA 245 (528)
Q Consensus 167 ~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~ 245 (528)
+++.|++|+.||.|++||+............... ........|...|++++|+|++..+|++++.||.|++||+...
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-- 132 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL-- 132 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT--
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC--
Confidence 4567778888888888888752211100000000 0011112489999999999944449999999999999999752
Q ss_pred CCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC---CCCEEEEEeCCCcEEEEecCCceEEeeecccCC
Q 009715 246 GDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST---DGTYLATVGRDGYLRVFDYSKEQLICGGKSYYG 322 (528)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp---dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 322 (528)
..+..+. +...+.++.|++ ++.++++++.|+.|++||+++++.+..+..|..
T Consensus 133 ------------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 187 (408)
T 4a11_B 133 ------------------------QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQ 187 (408)
T ss_dssp ------------------------EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCS
T ss_pred ------------------------ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCC
Confidence 1222222 567899999998 455999999999999999999999889999999
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCe-EEEEe---------------ecCCCCeEEEEEecCCCCCCCCCCcc
Q 009715 323 ALLCCAWSMDGK-YILTGGEDDLVQVWSMEDRK-VVAWG---------------EGHNSWVSGVAFDSYWSQPNSDGTAE 385 (528)
Q Consensus 323 ~v~~l~~sp~g~-~l~sg~~dg~v~vwd~~~~~-~~~~~---------------~~h~~~V~~v~f~p~~~~~~~dg~~~ 385 (528)
.|.+++|+|+++ +|++++.|+.|++||++.+. ++..+ .+|...|.+++|+| +|
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~--- 257 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-------DG--- 257 (408)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-------TS---
T ss_pred cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-------CC---
Confidence 999999999998 58899999999999998764 44444 57899999999999 88
Q ss_pred ceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCC---CCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEee
Q 009715 386 TVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPL---GGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHR 462 (528)
Q Consensus 386 ~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~---~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~ 462 (528)
.+|++++.|+.|++||+++++....+..... .....+.. .......+..+..++.+.+||+...+++..+.
T Consensus 258 ---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 258 ---LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTV---SCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp ---SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEE---CCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred ---CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEE---ecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 6899999999999999999876554432111 11111110 11223445666778899999999999999999
Q ss_pred cCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCccc
Q 009715 463 VHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAES 498 (528)
Q Consensus 463 ~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~ 498 (528)
+|...|.+++|+|++ |++++.||.|++|++...+..
T Consensus 332 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 332 GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 999999999999985 999999999999999876643
No 53
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.8e-33 Score=280.24 Aligned_cols=271 Identities=16% Similarity=0.217 Sum_probs=220.1
Q ss_pred CCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeC----CCcEEEEEeCCceEEEEEcCCC
Q 009715 168 GHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPG----GDGAFVVGHADGNLYVYEKSKD 243 (528)
Q Consensus 168 ~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~----g~~~l~tg~~dg~v~vwd~~~~ 243 (528)
...++++..+|.|++||+.... .......+. ...|...|++++|+|+ +. +|++|+.||.|++||+.+
T Consensus 34 ~~~~~~~~~~~~v~vw~~~~~~-----~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~dg~i~v~d~~~- 104 (366)
T 3k26_A 34 DPLVFATVGSNRVTLYECHSQG-----EIRLLQSYV--DADADENFYTCAWTYDSNTSHP-LLAVAGSRGIIRIINPIT- 104 (366)
T ss_dssp SCEEEEEEETTEEEEEEECGGG-----CEEEEEEEE--CSCTTCCEEEEEEEECTTTCCE-EEEEEETTCEEEEECTTT-
T ss_pred CceEEEECCCCEEEEEEcCCCc-----EEEeeeecc--ccCCCCcEEEEEeccCCCCCCC-EEEEecCCCEEEEEEchh-
Confidence 3456667777789999987521 111111111 1127789999999999 55 899999999999999875
Q ss_pred CCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC-CCCEEEEEeCCCcEEEEecCCceEEeee---cc
Q 009715 244 GAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST-DGTYLATVGRDGYLRVFDYSKEQLICGG---KS 319 (528)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-dg~~l~s~~~dg~i~vwd~~~~~~~~~~---~~ 319 (528)
.+.+..+..|...|.+++|+| ++.+|++++.||.|++||+++++.+..+ ..
T Consensus 105 -------------------------~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 159 (366)
T 3k26_A 105 -------------------------MQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEG 159 (366)
T ss_dssp -------------------------CCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTS
T ss_pred -------------------------ceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccc
Confidence 245667788999999999999 9999999999999999999999998887 67
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee----------------------------cCCCCeEEEEE
Q 009715 320 YYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGE----------------------------GHNSWVSGVAF 371 (528)
Q Consensus 320 ~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~----------------------------~h~~~V~~v~f 371 (528)
|...|.+++|+|++++|++++.|+.|++||+++++.+..+. +|...|.+++|
T Consensus 160 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 239 (366)
T 3k26_A 160 HRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRW 239 (366)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEE
T ss_pred ccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEE
Confidence 99999999999999999999999999999999876544333 39999999999
Q ss_pred ecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeE--------------EEEeec-CCCCCCCeecCC--CCCccC
Q 009715 372 DSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEI--------------VVPLRR-GPLGGSPTFSTG--SQSAHW 434 (528)
Q Consensus 372 ~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~--------------~~~~~~-~~~~~~~~~s~~--~~~~~~ 434 (528)
++ .+|++++.|+.|++||+++++. +..+.. ...+..+.|+++ +
T Consensus 240 ~~---------------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~----- 299 (366)
T 3k26_A 240 LG---------------DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ----- 299 (366)
T ss_dssp ET---------------TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS-----
T ss_pred cC---------------CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC-----
Confidence 75 4899999999999999988643 444443 245677778776 4
Q ss_pred CceeeeecCCCCceeeecCCCCce----EEeecC--CCCeEEEEEeCCe--EEEEECCCeEEEEeCC
Q 009715 435 DNVCPVGTLQPAPSMRDVPKLSPL----VAHRVH--TEPLSGLIFTQES--VLTVCREGHIKIWMRP 493 (528)
Q Consensus 435 d~~~~~g~~~~~~~~~d~~~~~~~----~~~~~h--~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~ 493 (528)
..+..+..++.+++||+...+++ ..+..| ...|.+++|+|++ |++++.||.|++||+.
T Consensus 300 -~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 300 -KMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp -SEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred -cEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 56788899999999999987643 367777 7999999999974 9999999999999985
No 54
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.4e-33 Score=272.52 Aligned_cols=242 Identities=17% Similarity=0.296 Sum_probs=189.7
Q ss_pred CCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeC--CCcEEEEEeCCceEEEEEcCCC
Q 009715 166 KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPG--GDGAFVVGHADGNLYVYEKSKD 243 (528)
Q Consensus 166 ~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--g~~~l~tg~~dg~v~vwd~~~~ 243 (528)
++++.|++|+.||.|++||+..... + . ......|..+|++++|+|+ +. +|++|+.||+|+|||+...
T Consensus 19 ~~g~~las~s~D~~v~iw~~~~~~~---~-~------~~~l~gH~~~V~~v~~s~~~~g~-~l~s~s~D~~v~iWd~~~~ 87 (297)
T 2pm7_B 19 YYGKRMATCSSDKTIKIFEVEGETH---K-L------IDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVMIWKEENG 87 (297)
T ss_dssp TTSSEEEEEETTSCEEEEEBCSSCB---C-C------CEEECCCSSCEEEEEECCGGGCS-EEEEEETTTEEEEEEBSSS
T ss_pred CCCCEEEEEeCCCEEEEEecCCCCc---E-E------EEEEccccCCeEEEEecCCCcCC-EEEEEcCCCEEEEEEcCCC
Confidence 4667788999999999999864110 0 1 1112249999999999864 67 9999999999999998752
Q ss_pred CCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC--CCEEEEEeCCCcEEEEecCCceE--Eeeecc
Q 009715 244 GAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD--GTYLATVGRDGYLRVFDYSKEQL--ICGGKS 319 (528)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd--g~~l~s~~~dg~i~vwd~~~~~~--~~~~~~ 319 (528)
. ...+..+..|...|.+++|+|+ +.+|++++.|+.|++||++++.. ...+.+
T Consensus 88 ~------------------------~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~ 143 (297)
T 2pm7_B 88 R------------------------WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA 143 (297)
T ss_dssp C------------------------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEEC
T ss_pred c------------------------eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeec
Confidence 1 1234556778899999999997 89999999999999999986532 345678
Q ss_pred cCCCeEEEEEcCC-------------CCEEEEEeCCCcEEEEECCCCe----EEEEeecCCCCeEEEEEecCCCCCCCCC
Q 009715 320 YYGALLCCAWSMD-------------GKYILTGGEDDLVQVWSMEDRK----VVAWGEGHNSWVSGVAFDSYWSQPNSDG 382 (528)
Q Consensus 320 ~~~~v~~l~~sp~-------------g~~l~sg~~dg~v~vwd~~~~~----~~~~~~~h~~~V~~v~f~p~~~~~~~dg 382 (528)
|...|.+++|+|+ +++|++|+.|+.|+|||+++++ ++..+.+|...|.+++|+| ++
T Consensus 144 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp-------~~ 216 (297)
T 2pm7_B 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-------TV 216 (297)
T ss_dssp CSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-------CC
T ss_pred ccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECC-------CC
Confidence 9999999999997 5799999999999999998765 6678889999999999999 73
Q ss_pred CccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEee
Q 009715 383 TAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHR 462 (528)
Q Consensus 383 ~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~ 462 (528)
. ...+|++++.|++|++||++......... +....
T Consensus 217 ~---~~~~las~s~D~~v~iWd~~~~~~~~~~~------------------------------------------~~~~~ 251 (297)
T 2pm7_B 217 L---LRSYMASVSQDRTCIIWTQDNEQGPWKKT------------------------------------------LLKEE 251 (297)
T ss_dssp S---SSEEEEEEETTSCEEEEEESSTTSCCEEE------------------------------------------ESSSS
T ss_pred C---CceEEEEEECCCcEEEEEeCCCCCcccee------------------------------------------eeecc
Confidence 0 00689999999999999987642100000 00012
Q ss_pred cCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCC
Q 009715 463 VHTEPLSGLIFTQES--VLTVCREGHIKIWMRPG 494 (528)
Q Consensus 463 ~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~ 494 (528)
.|...|.+++|+|++ |++++.|+.|+||+...
T Consensus 252 ~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 252 KFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 477889999999985 99999999999999763
No 55
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.5e-33 Score=286.38 Aligned_cols=292 Identities=19% Similarity=0.240 Sum_probs=246.0
Q ss_pred CCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCC
Q 009715 166 KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGA 245 (528)
Q Consensus 166 ~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~ 245 (528)
++++.|++|+.||.|++||+.+. +. ......|...|++++|+ +. +|++|+.||.|++||+.+.
T Consensus 127 ~~g~~l~sg~~dg~i~vwd~~~~-----~~-------~~~~~~h~~~v~~~~~~--~~-~l~s~~~dg~i~vwd~~~~-- 189 (445)
T 2ovr_B 127 FCGNRIVSGSDDNTLKVWSAVTG-----KC-------LRTLVGHTGGVWSSQMR--DN-IIISGSTDRTLKVWNAETG-- 189 (445)
T ss_dssp EETTEEEEEETTSCEEEEETTTC-----CE-------EEECCCCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTT--
T ss_pred EcCCEEEEEECCCcEEEEECCCC-----cE-------EEEEcCCCCCEEEEEec--CC-EEEEEeCCCeEEEEECCcC--
Confidence 34678999999999999999762 11 11122499999999998 44 8999999999999999752
Q ss_pred CCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeE
Q 009715 246 GDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALL 325 (528)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 325 (528)
+.+..+.+|...|.++.|+ ++.|++++.|+.|++||+.+++.+..+..|...|.
T Consensus 190 ------------------------~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~ 243 (445)
T 2ovr_B 190 ------------------------ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 243 (445)
T ss_dssp ------------------------EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEE
T ss_pred ------------------------cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEE
Confidence 3456677889999999995 56899999999999999999999999999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEc
Q 009715 326 CCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDL 405 (528)
Q Consensus 326 ~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~ 405 (528)
+++| +++++++++.|+.|++||+++++++..+.+|...|.+++|+. .++++++.|+.|++||+
T Consensus 244 ~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~---------------~~l~~~~~d~~i~i~d~ 306 (445)
T 2ovr_B 244 CVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG---------------IHVVSGSLDTSIRVWDV 306 (445)
T ss_dssp EEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECS---------------SEEEEEETTSCEEEEET
T ss_pred EEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECC---------------CEEEEEeCCCeEEEEEC
Confidence 9999 788999999999999999999999999999999999999943 58999999999999999
Q ss_pred cCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeec---CCCCeEEEEEeCCeEEEEE
Q 009715 406 EMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRV---HTEPLSGLIFTQESVLTVC 482 (528)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~---h~~~V~~l~~s~d~l~t~s 482 (528)
++++++..+..... ....+..+ ...+..++.++.+++||++..+++..+.. |...|.+++|+++.|++++
T Consensus 307 ~~~~~~~~~~~~~~-~v~~~~~~------~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~ 379 (445)
T 2ovr_B 307 ETGNCIHTLTGHQS-LTSGMELK------DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSS 379 (445)
T ss_dssp TTCCEEEEECCCCS-CEEEEEEE------TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEE
T ss_pred CCCCEEEEEcCCcc-cEEEEEEe------CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEe
Confidence 99999888764321 11122222 24678889999999999999999998886 8899999999999999999
Q ss_pred CCCeEEEEeCCCCcccc-------CCCccce--EEEccCCceEEEeeeecc
Q 009715 483 REGHIKIWMRPGVAESQ-------SSSSETV--LSTSSKDKPLLSSKVVTS 524 (528)
Q Consensus 483 ~Dg~i~iW~~~~~~~~~-------~~~~~~v--l~~spd~~~l~s~~~~gs 524 (528)
.||.|++||+..++... ..+...| ++++|++++|++++.+|.
T Consensus 380 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 380 DDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp TTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred CCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 99999999998776322 2455556 888999999999998886
No 56
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-33 Score=273.47 Aligned_cols=243 Identities=14% Similarity=0.174 Sum_probs=196.9
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|...|++++|+|+|+ +|++|+.|++|+||++.... ...+..+.+|.+.|.+++|
T Consensus 7 ~h~~~V~~~~~s~~g~-~las~s~D~~v~iw~~~~~~------------------------~~~~~~l~gH~~~V~~v~~ 61 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGK-RMATCSSDKTIKIFEVEGET------------------------HKLIDTLTGHEGPVWRVDW 61 (297)
T ss_dssp SCSSCEEEEEECTTSS-EEEEEETTSCEEEEEBCSSC------------------------BCCCEEECCCSSCEEEEEE
T ss_pred CCcCceEEEEECCCCC-EEEEEeCCCEEEEEecCCCC------------------------cEEEEEEccccCCeEEEEe
Confidence 3999999999999999 99999999999999986411 2356778899999999999
Q ss_pred CC--CCCEEEEEeCCCcEEEEecCCce--EEeeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCe--EEEEe
Q 009715 288 ST--DGTYLATVGRDGYLRVFDYSKEQ--LICGGKSYYGALLCCAWSMD--GKYILTGGEDDLVQVWSMEDRK--VVAWG 359 (528)
Q Consensus 288 sp--dg~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~l~~sp~--g~~l~sg~~dg~v~vwd~~~~~--~~~~~ 359 (528)
++ ++++|++++.|+.|++||+++++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+
T Consensus 62 s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 141 (297)
T 2pm7_B 62 AHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIII 141 (297)
T ss_dssp CCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEE
T ss_pred cCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeee
Confidence 86 48999999999999999998774 45566779999999999997 8999999999999999998763 24567
Q ss_pred ecCCCCeEEEEEecCCCCCCCCCCcc-------ceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCc
Q 009715 360 EGHNSWVSGVAFDSYWSQPNSDGTAE-------TVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSA 432 (528)
Q Consensus 360 ~~h~~~V~~v~f~p~~~~~~~dg~~~-------~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 432 (528)
.+|...|.+++|+| ++... ....+|++++.|++|++||+++++....
T Consensus 142 ~~h~~~v~~~~~~p-------~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~------------------- 195 (297)
T 2pm7_B 142 DAHAIGVNSASWAP-------ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV------------------- 195 (297)
T ss_dssp ECCSSCEEEEEECC-------CC------------CCEEEEEETTSCEEEEEEETTTTEEE-------------------
T ss_pred ecccCccceEeecC-------CcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEE-------------------
Confidence 78999999999998 52000 0014899999999999999987542111
Q ss_pred cCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCC-----eEEEEECCCeEEEEeCCCCc-----ccc--C
Q 009715 433 HWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQE-----SVLTVCREGHIKIWMRPGVA-----ESQ--S 500 (528)
Q Consensus 433 ~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d-----~l~t~s~Dg~i~iW~~~~~~-----~~~--~ 500 (528)
.+..+.+|...|.+++|+|+ .|++++.|++|+|||+.... ... .
T Consensus 196 ------------------------~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~ 251 (297)
T 2pm7_B 196 ------------------------LESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEE 251 (297)
T ss_dssp ------------------------EEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSS
T ss_pred ------------------------EEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecc
Confidence 12245689999999999996 39999999999999987642 111 2
Q ss_pred CCccce--EEEccCCceEEEeeeeccc
Q 009715 501 SSSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 501 ~~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
.+...| ++|+||+++|++++.+|.+
T Consensus 252 ~~~~~v~~~~~s~~g~~las~~~D~~v 278 (297)
T 2pm7_B 252 KFPDVLWRASWSLSGNVLALSGGDNKV 278 (297)
T ss_dssp CCSSCEEEEEECSSSCCEEEEETTSCE
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcE
Confidence 455666 8899999999999887654
No 57
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9.3e-34 Score=313.40 Aligned_cols=357 Identities=14% Similarity=0.116 Sum_probs=269.0
Q ss_pred eccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC------CCCCCeEEEEec
Q 009715 103 LGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD------AKDGHDLLIGLN 176 (528)
Q Consensus 103 ~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~------~~~~~~l~~g~~ 176 (528)
..|.+|.+.|++++|+| ++.++++++. +|.+.+|+......+..+..+... +++++.|++|+.
T Consensus 7 ~~~~~h~~~v~~i~~sp-~~~~la~~~~----------~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 75 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHP-TEPWVLTTLY----------SGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD 75 (814)
T ss_dssp EEEEEECSCEEEEEECS-SSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET
T ss_pred eeeecCCCceEEEEECC-CCCEEEEEeC----------CCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC
Confidence 56889999999999999 6666665553 788999987776555555443333 889999999999
Q ss_pred CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCcccccccc
Q 009715 177 SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQ 256 (528)
Q Consensus 177 ~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~ 256 (528)
+|.|++||+.+. +... ....|...|++++|+|+++ +|++++.||.|++|++...
T Consensus 76 dg~i~vw~~~~~-----~~~~-------~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~------------- 129 (814)
T 3mkq_A 76 DFRIRVFNYNTG-----EKVV-------DFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENN------------- 129 (814)
T ss_dssp TSEEEEEETTTC-----CEEE-------EEECCSSCEEEEEECSSSS-EEEEEETTSEEEEEEGGGT-------------
T ss_pred CCeEEEEECCCC-----cEEE-------EEecCCCCEEEEEEeCCCC-EEEEEcCCCEEEEEECCCC-------------
Confidence 999999999762 1111 1123889999999999999 8999999999999999752
Q ss_pred ceeEEeccCCCCCCCeEEEeecCCCeEEEEECC-CCCEEEEEeCCCcEEEEecCCceEEeeecccC-CCeEEEEEcC--C
Q 009715 257 TQFSVAHPRYSKSNPIARWHICQGSINSIAFST-DGTYLATVGRDGYLRVFDYSKEQLICGGKSYY-GALLCCAWSM--D 332 (528)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~v~~l~~sp--~ 332 (528)
......+..|...|.+++|+| ++..|++++.||.|++||+.+++....+..+. ..+.+++|+| +
T Consensus 130 ------------~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 197 (814)
T 3mkq_A 130 ------------WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPD 197 (814)
T ss_dssp ------------SEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTT
T ss_pred ------------ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCC
Confidence 134556778889999999999 89999999999999999998877666655544 8899999999 9
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEE
Q 009715 333 GKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVV 412 (528)
Q Consensus 333 g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~ 412 (528)
+.+|++++.|+.|++||+++++++..+.+|...|.+++|+| +| .+|++++.|+.|++||+.+++.+.
T Consensus 198 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-------~~------~~l~~~~~dg~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 198 KPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP-------TL------PIIISGSEDGTLKIWNSSTYKVEK 264 (814)
T ss_dssp CCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-------SS------SEEEEEETTSCEEEEETTTCSEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-------CC------CEEEEEeCCCeEEEEECCCCcEEE
Confidence 99999999999999999999999999999999999999999 88 689999999999999999999888
Q ss_pred EeecC-CCCCCCeecCCCCC----ccCCceeeeecCCCC----------ce--------------------eeecCCCC-
Q 009715 413 PLRRG-PLGGSPTFSTGSQS----AHWDNVCPVGTLQPA----------PS--------------------MRDVPKLS- 456 (528)
Q Consensus 413 ~~~~~-~~~~~~~~s~~~~~----~~~d~~~~~g~~~~~----------~~--------------------~~d~~~~~- 456 (528)
.+... ..+..+++++++.. ...+..+........ .. .|++....
T Consensus 265 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (814)
T 3mkq_A 265 TLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEP 344 (814)
T ss_dssp EECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSC
T ss_pred EeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCcc
Confidence 87653 34455566666531 011111111110000 00 01111111
Q ss_pred ---ceEEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCccccCCCccce--EEEccCCceEEEeeeeccc
Q 009715 457 ---PLVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAESQSSSSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 457 ---~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~~~~~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
....+..|...+.+++|+|++ |++++ |+.+.+|++...... +.+.+ ++|+||+++|+++..+|.+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~~~---~~~~i~~~~~spdg~~la~~~~~g~v 416 (814)
T 3mkq_A 345 LSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWRNK---AFGKCQDFVWGPDSNSYALIDETGQI 416 (814)
T ss_dssp BCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTEEE---EEEECSEEEECTTSSCEEEECTTCCE
T ss_pred ceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECcccccc---CCCceEEEEEeCCCCeEEEEeCCCcE
Confidence 122334566778999999986 66666 999999997643321 12333 8899999999998877643
No 58
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.4e-34 Score=287.01 Aligned_cols=311 Identities=15% Similarity=0.170 Sum_probs=233.8
Q ss_pred eccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcE------EEEeCCCCCCC------CCC---
Q 009715 103 LGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAI------FISDLNSQDKD------AKD--- 167 (528)
Q Consensus 103 ~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i------~v~~~~~~~~~------~~~--- 167 (528)
..+.+|.+.|++++|+| .++++++. ||.+.+|+..... .+..+...... +++
T Consensus 10 ~~~~~h~~~i~~~~~~~---~~l~s~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 76 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN---SFTVSCSG----------DGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIER 76 (397)
T ss_dssp EESSCSSSCEEEEEECS---SEEEEEET----------TSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEET
T ss_pred hhhhhhhcCeEEEEecC---CeEEEEcC----------CCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEeccccc
Confidence 55789999999999987 55665554 7888888875532 22223222222 666
Q ss_pred -C---CeEEEEecCCcEEEEEccccccccccceeeeeeeccCCccc-----CCceeEEEEe----eCCCcE-EEEEeCCc
Q 009715 168 -G---HDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVN-----NSRCTSVTWV----PGGDGA-FVVGHADG 233 (528)
Q Consensus 168 -~---~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~l~~~----p~g~~~-l~tg~~dg 233 (528)
+ +.|++++.||.|++||+...... .+.... ....| ...|.+++|+ |+++ + |++++.||
T Consensus 77 ~g~~~~~l~s~~~dg~i~iw~~~~~~~~-~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~l~~~~~dg 148 (397)
T 1sq9_A 77 DAFELCLVATTSFSGDLLFYRITREDET-KKVIFE------KLDLLDSDMKKHSFWALKWGASNDRLLS-HRLVATDVKG 148 (397)
T ss_dssp TTEEEEEEEEEETTSCEEEEEEEECTTT-CCEEEE------EECCSCTTGGGSCEEEEEEECCC----C-EEEEEEETTS
T ss_pred CCccccEEEEEcCCCCEEEEEccCCccc-ccccce------eecccccccCCCcEEEEEEeeccCCCCc-eEEEEEeCCC
Confidence 8 89999999999999999863210 000011 11124 5899999999 9999 8 99999999
Q ss_pred eEEEEEcCC------CCCCCCccccccccceeEEeccCCCCCCCeEEE-------eecCCCeEEEEECCCCCEEEEEeCC
Q 009715 234 NLYVYEKSK------DGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARW-------HICQGSINSIAFSTDGTYLATVGRD 300 (528)
Q Consensus 234 ~v~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~h~~~v~~l~~spdg~~l~s~~~d 300 (528)
.|++||+.. .... ...+...+ ..|...|.+++|+|++ +|++++.|
T Consensus 149 ~i~iwd~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d 206 (397)
T 1sq9_A 149 TTYIWKFHPFADESNSLTL---------------------NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN 206 (397)
T ss_dssp CEEEEEEESSSSHHHHTTT---------------------CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT
T ss_pred cEEEEeCCcccccccccee---------------------eccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC
Confidence 999999975 2110 01122234 3478899999999999 99999999
Q ss_pred CcEEEEecCCceEEeeecc---c---CCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCeEEEEeec----------
Q 009715 301 GYLRVFDYSKEQLICGGKS---Y---YGALLCCAWSMDGKYILTGGED---DLVQVWSMEDRKVVAWGEG---------- 361 (528)
Q Consensus 301 g~i~vwd~~~~~~~~~~~~---~---~~~v~~l~~sp~g~~l~sg~~d---g~v~vwd~~~~~~~~~~~~---------- 361 (528)
+.|++||+++++.+..+.. | ...|.+++|+|++++|++++.| +.|++||+++++++..+.+
T Consensus 207 g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 286 (397)
T 1sq9_A 207 GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLG 286 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------C
T ss_pred CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccc
Confidence 9999999999999999988 8 9999999999999999999999 9999999999999999998
Q ss_pred ---CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCcee
Q 009715 362 ---HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVC 438 (528)
Q Consensus 362 ---h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~ 438 (528)
|...|.+++|+| ++ .+|++++.|+.|++||+++++.+..+........ ..
T Consensus 287 ~~~~~~~v~~~~~~~-------~~------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~------------ 339 (397)
T 1sq9_A 287 EFAHSSWVMSLSFND-------SG------ETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIE--IE------------ 339 (397)
T ss_dssp CBSBSSCEEEEEECS-------SS------SEEEEEETTSEEEEEETTTTEEEEEEECCGGGCS--SG------------
T ss_pred ccccCCcEEEEEECC-------CC------CEEEEEeCCCeEEEEEcCCCceeEEEecccCccc--ch------------
Confidence 999999999999 88 6899999999999999999998887762100000 00
Q ss_pred eeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCC------------eEEEEECCCeEEEEeCCCC
Q 009715 439 PVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQE------------SVLTVCREGHIKIWMRPGV 495 (528)
Q Consensus 439 ~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d------------~l~t~s~Dg~i~iW~~~~~ 495 (528)
.|..... ......|...|.+++|+|+ .|++++.||.|++|++.++
T Consensus 340 -----------~~~~~g~-~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 340 -----------EDILAVD-EHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp -----------GGCCCBC-TTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred -----------hhhhccc-cccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 0000000 0011346899999999998 4999999999999998765
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.4e-33 Score=283.41 Aligned_cols=273 Identities=17% Similarity=0.229 Sum_probs=230.5
Q ss_pred CCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCC
Q 009715 167 DGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAG 246 (528)
Q Consensus 167 ~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~ 246 (528)
++..+++++.+|.|++||+.... .. .... ..|...|++++|+|++. +|++|+.||.|++||+..
T Consensus 102 s~~~l~~~~~d~~v~lw~~~~~~-----~~-~~~~-----~~~~~~v~~v~~s~~~~-~l~~~~~dg~i~iwd~~~---- 165 (401)
T 4aez_A 102 SNLNVVAVALERNVYVWNADSGS-----VS-ALAE-----TDESTYVASVKWSHDGS-FLSVGLGNGLVDIYDVES---- 165 (401)
T ss_dssp CTTSEEEEEETTEEEEEETTTCC-----EE-EEEE-----CCTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTT----
T ss_pred cCCCEEEEECCCeEEEeeCCCCc-----Ee-Eeee-----cCCCCCEEEEEECCCCC-EEEEECCCCeEEEEECcC----
Confidence 45668889999999999997621 11 1111 11788999999999999 999999999999999875
Q ss_pred CCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecC-CceEEeeecccCCCeE
Q 009715 247 DSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYS-KEQLICGGKSYYGALL 325 (528)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~~~v~ 325 (528)
...+..+..|...|.+++| ++++|++++.|+.|++||++ ....+..+..|.+.|.
T Consensus 166 ----------------------~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 221 (401)
T 4aez_A 166 ----------------------QTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVC 221 (401)
T ss_dssp ----------------------CCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE
T ss_pred ----------------------CeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCee
Confidence 2356677789999999999 56799999999999999998 5667788888999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe--CCCeEEEE
Q 009715 326 CCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG--QDTRLLLW 403 (528)
Q Consensus 326 ~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s--~D~~i~lw 403 (528)
+++|+|++++|++++.|+.|++||+++++++..+..|...|.+++|+| ++. .++++++ .|+.|++|
T Consensus 222 ~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p-------~~~-----~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 222 GLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCP-------WQS-----NLLATGGGTMDKQIHFW 289 (401)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECT-------TST-----TEEEEECCTTTCEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECC-------CCC-----CEEEEecCCCCCEEEEE
Confidence 999999999999999999999999999999999999999999999999 763 4677765 79999999
Q ss_pred EccCCeEEEEeecCCCCCCCeecCCCCCccCCceeee--ecCCCCceeeecCCCC--ceEEeecCCCCeEEEEEeCCe--
Q 009715 404 DLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPV--GTLQPAPSMRDVPKLS--PLVAHRVHTEPLSGLIFTQES-- 477 (528)
Q Consensus 404 d~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~--g~~~~~~~~~d~~~~~--~~~~~~~h~~~V~~l~~s~d~-- 477 (528)
|+++++.+..+.....+..+.|++++ ..+.. |..++.+.+||++..+ ....+.+|...|.+++|+|++
T Consensus 290 d~~~~~~~~~~~~~~~v~~~~~s~~~------~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~ 363 (401)
T 4aez_A 290 NAATGARVNTVDAGSQVTSLIWSPHS------KEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRI 363 (401)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECSSS------SEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSE
T ss_pred ECCCCCEEEEEeCCCcEEEEEECCCC------CeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCE
Confidence 99999999999887778888888876 34444 6688999999998854 444567899999999999985
Q ss_pred EEEEECCCeEEEEeCCCCcc
Q 009715 478 VLTVCREGHIKIWMRPGVAE 497 (528)
Q Consensus 478 l~t~s~Dg~i~iW~~~~~~~ 497 (528)
|++++.||.|++|++..++.
T Consensus 364 l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 364 LSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp EEEECTTSEEEEEECCC---
T ss_pred EEEEeCCCcEEEEECCCCcc
Confidence 99999999999999987653
No 60
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.9e-32 Score=283.09 Aligned_cols=346 Identities=14% Similarity=0.143 Sum_probs=264.1
Q ss_pred hhcCCCC-CceeeccCCCCCCC-ccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC-----
Q 009715 92 KLLGTGN-GSRTLGFGGGNGGS-KSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD----- 164 (528)
Q Consensus 92 ~~~~~~~-g~~~~sf~gh~~~v-~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~----- 164 (528)
+.|..+. ......|.||.+.+ .|+.++ +.++++++ .||.+.+|+......+..+..+...
T Consensus 103 ~~w~~~~~~~~~~~l~~h~~~v~~~~~~~---~~~l~sgs----------~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~ 169 (464)
T 3v7d_B 103 KNWYNPKFVPQRTTLRGHMTSVITCLQFE---DNYVITGA----------DDKMIRVYDSINKKFLLQLSGHDGGVWALK 169 (464)
T ss_dssp HHHHCTTCCCEEEEEECCSSSCEEEEEEE---TTEEEEEE----------TTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred hhhcCCCcCcceEEEcCCCCCcEEEEEEC---CCEEEEEc----------CCCcEEEEECCCCcEEEEEeCCCcCEEEEE
Confidence 4454443 34456789999986 666663 34555555 4899999998877777776655444
Q ss_pred -CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEee--CCCcEEEEEeCCceEEEEEcC
Q 009715 165 -AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVP--GGDGAFVVGHADGNLYVYEKS 241 (528)
Q Consensus 165 -~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p--~g~~~l~tg~~dg~v~vwd~~ 241 (528)
++++ .|++|+.||.|++||+++. +.. . ....|...|.+++|++ ++. +|++++.||.|++||+.
T Consensus 170 ~~~~~-~l~s~s~dg~i~vwd~~~~-----~~~---~----~~~~h~~~v~~l~~~~~~~~~-~l~s~s~d~~i~vwd~~ 235 (464)
T 3v7d_B 170 YAHGG-ILVSGSTDRTVRVWDIKKG-----CCT---H----VFEGHNSTVRCLDIVEYKNIK-YIVTGSRDNTLHVWKLP 235 (464)
T ss_dssp ECSTT-EEEEEETTSCEEEEETTTT-----EEE---E----EECCCSSCEEEEEEEESSSCE-EEEEEETTSCEEEEECC
T ss_pred EcCCC-EEEEEeCCCCEEEEECCCC-----cEE---E----EECCCCCccEEEEEecCCCCC-EEEEEcCCCcEEEeeCC
Confidence 5555 9999999999999999862 111 1 1123899999999995 556 89999999999999998
Q ss_pred CCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccC
Q 009715 242 KDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYY 321 (528)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 321 (528)
............. ..............+..+.+|...|.++ ++++++|++++.|+.|++||+.+++.+..+.+|.
T Consensus 236 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 310 (464)
T 3v7d_B 236 KESSVPDHGEEHD---YPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT 310 (464)
T ss_dssp CCCCC------CC---SSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred CCcccccccccCC---cceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC
Confidence 6432211110000 0001111112223466788899999887 5678899999999999999999999999999999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEE
Q 009715 322 GALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLL 401 (528)
Q Consensus 322 ~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~ 401 (528)
..|.+++|+|++++|++|+.|+.|++||+++++++..+.+|...|.+++|++ .+|++++.|+.|+
T Consensus 311 ~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---------------~~l~s~s~dg~v~ 375 (464)
T 3v7d_B 311 DRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD---------------KFLVSAAADGSIR 375 (464)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS---------------SEEEEEETTSEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC---------------CEEEEEeCCCcEE
Confidence 9999999999999999999999999999999999999999999999999975 5899999999999
Q ss_pred EEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEE-eecCCCCeEEEEEeCCeE-E
Q 009715 402 LWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVA-HRVHTEPLSGLIFTQESV-L 479 (528)
Q Consensus 402 lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~-~~~h~~~V~~l~~s~d~l-~ 479 (528)
+||+.+++.............+.+++++ ..+..+. ++.+++||+.+.+++.. +..|...|.+++|+.+.+ +
T Consensus 376 vwd~~~~~~~~~~~~~~~~~~~~~~~~~------~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~ 448 (464)
T 3v7d_B 376 GWDANDYSRKFSYHHTNLSAITTFYVSD------NILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVA 448 (464)
T ss_dssp EEETTTCCEEEEEECTTCCCEEEEEECS------SEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEE
T ss_pred EEECCCCceeeeecCCCCccEEEEEeCC------CEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEE
Confidence 9999999888777766666677777766 3555566 78899999999888875 567888999999997764 4
Q ss_pred EEECCCeEEEEe
Q 009715 480 TVCREGHIKIWM 491 (528)
Q Consensus 480 t~s~Dg~i~iW~ 491 (528)
+++.||.+.+|-
T Consensus 449 ~~~~~g~~~i~~ 460 (464)
T 3v7d_B 449 AVEKDGQSFLEI 460 (464)
T ss_dssp EEEETTEEEEEE
T ss_pred EEEeCCeEEEEE
Confidence 555666655553
No 61
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.3e-33 Score=272.89 Aligned_cols=280 Identities=18% Similarity=0.252 Sum_probs=235.7
Q ss_pred cccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEE
Q 009715 207 SVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIA 286 (528)
Q Consensus 207 ~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 286 (528)
.+|.+.|++|+|+|++..+|++|+.||+|+|||+...... ...+...+.+|...|.+++
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~---------------------~~~~~~~l~~h~~~V~~~~ 93 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN---------------------YGIPQRALRGHSHFVSDVV 93 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC---------------------SEEEEEEECCCSSCEEEEE
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc---------------------cceeeEEEeCCCCCEEEEE
Confidence 3599999999999985449999999999999999753211 1124567788999999999
Q ss_pred ECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE-EEEeecCCCC
Q 009715 287 FSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKV-VAWGEGHNSW 365 (528)
Q Consensus 287 ~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~-~~~~~~h~~~ 365 (528)
|+|++++|++++.|+.|++|+............+...+..+.+++++++|++++.|+.+++||+..... .....+|...
T Consensus 94 ~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~ 173 (340)
T 4aow_A 94 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEW 173 (340)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSC
T ss_pred ECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCc
Confidence 999999999999999999999999998888888888999999999999999999999999999987544 4556689999
Q ss_pred eEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC-CCCCCCeecCCCCCccCCceeeeecCC
Q 009715 366 VSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG-PLGGSPTFSTGSQSAHWDNVCPVGTLQ 444 (528)
Q Consensus 366 V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~d~~~~~g~~~ 444 (528)
|..++|++ ++.. .++++++.|+.|++||+++++.+..+... ..+.+++|++++ ..+..++.+
T Consensus 174 v~~~~~~~-------~~~~----~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~------~~l~s~s~D 236 (340)
T 4aow_A 174 VSCVRFSP-------NSSN----PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDG------SLCASGGKD 236 (340)
T ss_dssp EEEEEECS-------CSSS----CEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS------SEEEEEETT
T ss_pred ccceEEcc-------CCCC----cEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCC------CEEEEEeCC
Confidence 99999988 5411 47899999999999999999998887643 456778888876 567888999
Q ss_pred CCceeeecCCCCceEEeecCCCCeEEEEEeCCe-EEEEECCCeEEEEeCCCCccc-----------cCCCccce--EEEc
Q 009715 445 PAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES-VLTVCREGHIKIWMRPGVAES-----------QSSSSETV--LSTS 510 (528)
Q Consensus 445 ~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-l~t~s~Dg~i~iW~~~~~~~~-----------~~~~~~~v--l~~s 510 (528)
+.+++||++..+++..+..+ ..|.++.|+|+. +++++.|+.|++||+.+.... ...|...| ++|+
T Consensus 237 g~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 315 (340)
T 4aow_A 237 GQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWS 315 (340)
T ss_dssp CEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEEC
T ss_pred CeEEEEEeccCceeeeecCC-ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEEC
Confidence 99999999999988888754 689999999975 889999999999999875421 12466667 8889
Q ss_pred cCCceEEEeeeeccc
Q 009715 511 SKDKPLLSSKVVTSS 525 (528)
Q Consensus 511 pd~~~l~s~~~~gs~ 525 (528)
||+++|++++.+|.+
T Consensus 316 ~dg~~l~sgs~Dg~v 330 (340)
T 4aow_A 316 ADGQTLFAGYTDNLV 330 (340)
T ss_dssp TTSSEEEEEETTSCE
T ss_pred CCCCEEEEEeCCCEE
Confidence 999999999988765
No 62
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-32 Score=266.35 Aligned_cols=268 Identities=14% Similarity=0.106 Sum_probs=227.5
Q ss_pred CCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCC
Q 009715 167 DGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAG 246 (528)
Q Consensus 167 ~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~ 246 (528)
+++.|++|+.||.|++||+.... .. .....|...|.+++|+|++. +|++++.||.|++|++....
T Consensus 28 ~~~~l~s~~~dg~v~vw~~~~~~-----~~-------~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~-- 92 (313)
T 3odt_A 28 DDSKVASVSRDGTVRLWSKDDQW-----LG-------TVVYTGQGFLNSVCYDSEKE-LLLFGGKDTMINGVPLFATS-- 92 (313)
T ss_dssp ETTEEEEEETTSEEEEEEESSSE-----EE-------EEEEECSSCEEEEEEETTTT-EEEEEETTSCEEEEETTCCT--
T ss_pred CCCEEEEEEcCCcEEEEECCCCE-----EE-------EEeecCCccEEEEEECCCCC-EEEEecCCCeEEEEEeeecC--
Confidence 35567888899999999986521 11 11113888999999999999 99999999999999987522
Q ss_pred CCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEE
Q 009715 247 DSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLC 326 (528)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~ 326 (528)
....+..+..|...|.+++| ++++|++++.|+.|++|| .++.+..+..|...+.+
T Consensus 93 ---------------------~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~ 147 (313)
T 3odt_A 93 ---------------------GEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWD 147 (313)
T ss_dssp ---------------------TSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEE
T ss_pred ---------------------CCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeE
Confidence 12345667788999999999 677999999999999999 67788888889999999
Q ss_pred EEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEeec-CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEE
Q 009715 327 CAWSM-DGKYILTGGEDDLVQVWSMEDRKVVAWGEG-HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWD 404 (528)
Q Consensus 327 l~~sp-~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~-h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd 404 (528)
++|+| ++.++++++.|+.|++|| ..+.+..+.. |...|.+++|+| ++ . +++++.|+.|++||
T Consensus 148 ~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~-------~~------~-~~~~~~dg~i~i~d 211 (313)
T 3odt_A 148 AKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVD-------DG------H-FISCSNDGLIKLVD 211 (313)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEE-------TT------E-EEEEETTSEEEEEE
T ss_pred EEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcC-------CC------e-EEEccCCCeEEEEE
Confidence 99998 999999999999999999 4566667776 999999999999 88 5 99999999999999
Q ss_pred ccCCeEEEEeec-CCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe-EEEEE
Q 009715 405 LEMDEIVVPLRR-GPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES-VLTVC 482 (528)
Q Consensus 405 ~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-l~t~s 482 (528)
+++++.+..+.. ...+..+.|++++ .+..++.++.+++||+...+++..+..|...|.+++|+|++ +++++
T Consensus 212 ~~~~~~~~~~~~~~~~i~~~~~~~~~-------~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 284 (313)
T 3odt_A 212 MHTGDVLRTYEGHESFVYCIKLLPNG-------DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGS 284 (313)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECTTS-------CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEE
T ss_pred CCchhhhhhhhcCCceEEEEEEecCC-------CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEe
Confidence 999999988874 3456777887765 26688889999999999999999999999999999999985 88999
Q ss_pred CCCeEEEEeCCCCcc
Q 009715 483 REGHIKIWMRPGVAE 497 (528)
Q Consensus 483 ~Dg~i~iW~~~~~~~ 497 (528)
.||.|++|++..+..
T Consensus 285 ~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 285 SDNLVRIFSQEKSRW 299 (313)
T ss_dssp TTSCEEEEESCGGGC
T ss_pred CCCcEEEEeCCCCce
Confidence 999999999987653
No 63
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=9.7e-33 Score=283.89 Aligned_cols=325 Identities=13% Similarity=0.136 Sum_probs=267.0
Q ss_pred hhhhcCCCCCceeeccCCCCCCC-ccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC----
Q 009715 90 AAKLLGTGNGSRTLGFGGGNGGS-KSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD---- 164 (528)
Q Consensus 90 ~~~~~~~~~g~~~~sf~gh~~~v-~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~---- 164 (528)
..+-|..+.......+.||.+.+ .|+.+ ++.++++++. ||.+.+|+......+..+..+...
T Consensus 99 ~~~~w~~~~~~~~~~l~~h~~~v~~~~~~---~g~~l~sg~~----------dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 165 (445)
T 2ovr_B 99 IDTNWRRGELKSPKVLKGHDDHVITCLQF---CGNRIVSGSD----------DNTLKVWSAVTGKCLRTLVGHTGGVWSS 165 (445)
T ss_dssp HHHHHHHSCCCCCEEEECSTTSCEEEEEE---ETTEEEEEET----------TSCEEEEETTTCCEEEECCCCSSCEEEE
T ss_pred hhhcccCCCcceeEEecccCCCcEEEEEE---cCCEEEEEEC----------CCcEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 34457777766667789999986 55554 3455665554 899999998776666666654433
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
..+++.|++|+.||.|++||+.+. +.. .....|...|.+++|+ ++ .|++|+.||.|++||+..
T Consensus 166 ~~~~~~l~s~~~dg~i~vwd~~~~-----~~~-------~~~~~h~~~v~~~~~~--~~-~l~s~s~dg~i~~wd~~~-- 228 (445)
T 2ovr_B 166 QMRDNIIISGSTDRTLKVWNAETG-----ECI-------HTLYGHTSTVRCMHLH--EK-RVVSGSRDATLRVWDIET-- 228 (445)
T ss_dssp EEETTEEEEEETTSCEEEEETTTT-----EEE-------EEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEESSS--
T ss_pred EecCCEEEEEeCCCeEEEEECCcC-----cEE-------EEECCCCCcEEEEEec--CC-EEEEEeCCCEEEEEECCC--
Confidence 445789999999999999999762 111 1112488999999996 44 899999999999999975
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCe
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGAL 324 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v 324 (528)
...+..+..|...|.+++| ++.+|++++.|+.|++||+++++.+..+..|...|
T Consensus 229 ------------------------~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v 282 (445)
T 2ovr_B 229 ------------------------GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV 282 (445)
T ss_dssp ------------------------CCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCE
T ss_pred ------------------------CcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCce
Confidence 2356677789999999999 78899999999999999999999999999999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEE
Q 009715 325 LCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWD 404 (528)
Q Consensus 325 ~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd 404 (528)
.+++| ++.++++++.|+.|++||+++++++..+.+|...+.++.+++ .+|++++.|+.|++||
T Consensus 283 ~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---------------~~l~~~~~dg~i~vwd 345 (445)
T 2ovr_B 283 YSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD---------------NILVSGNADSTVKIWD 345 (445)
T ss_dssp EEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET---------------TEEEEEETTSCEEEEE
T ss_pred EEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeC---------------CEEEEEeCCCeEEEEE
Confidence 99999 789999999999999999999999999999999999999865 4899999999999999
Q ss_pred ccCCeEEEEeecC----CCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEe-----ecCCCCeEEEEEeC
Q 009715 405 LEMDEIVVPLRRG----PLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAH-----RVHTEPLSGLIFTQ 475 (528)
Q Consensus 405 ~~~~~~~~~~~~~----~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~-----~~h~~~V~~l~~s~ 475 (528)
+++++.+..+... ..+..+.+. ...+.+++.++.+++||+...+.+..+ ..|.+.|.+++|+|
T Consensus 346 ~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 417 (445)
T 2ovr_B 346 IKTGQCLQTLQGPNKHQSAVTCLQFN--------KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN 417 (445)
T ss_dssp TTTCCEEEEECSTTSCSSCEEEEEEC--------SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECS
T ss_pred CCCCcEEEEEccCCCCCCCEEEEEEC--------CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecC
Confidence 9999998888742 223334442 256788999999999999999988888 47889999999999
Q ss_pred Ce--EEEEECCCe----EEEEeCCCC
Q 009715 476 ES--VLTVCREGH----IKIWMRPGV 495 (528)
Q Consensus 476 d~--l~t~s~Dg~----i~iW~~~~~ 495 (528)
++ |++++.||+ |.+||+...
T Consensus 418 ~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 418 TKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp SEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred CEEEEEEcccCCCCccEEEEEECCCC
Confidence 86 889999998 999999764
No 64
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-34 Score=302.28 Aligned_cols=339 Identities=11% Similarity=0.027 Sum_probs=225.9
Q ss_pred CCCCCCccccCCccc-C-------CcccCCCCCC---------cceeeeCCCccEEEEeCCCc-E-E--EEeCCC--CCC
Q 009715 107 GGNGGSKSISGSSRI-G-------SLGASSSSTS---------MTNTNFDGKGTYIIFNVGDA-I-F--ISDLNS--QDK 163 (528)
Q Consensus 107 gh~~~v~~v~~s~~~-~-------~~~~s~s~~s---------~~~~~~~~~g~~~~~~~~~~-i-~--v~~~~~--~~~ 163 (528)
.+.+.|.+|+|+|.. + .+++.++... ..+++.+.|+.+.+|+.... + . ...+.. ...
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V 210 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEV 210 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSE
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcE
Confidence 468899999999954 1 4666555221 12445566777777775321 1 0 011111 111
Q ss_pred C----CC------CCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCc
Q 009715 164 D----AK------DGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADG 233 (528)
Q Consensus 164 ~----~~------~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg 233 (528)
. +| ++..|++++.||.|++||+............ ..........|...|++++|++++ .|++|+.||
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~-~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~Dg 287 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM-CEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNG 287 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC-CCSCSEEECCTTTCEEEEEESSSS--EEEEEETTS
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee-ecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCC
Confidence 1 44 3679999999999999999752110000000 000000123488999999999864 799999999
Q ss_pred eEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEE--EECCCC-CEEEEEeCCCcEEEEecCC
Q 009715 234 NLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSI--AFSTDG-TYLATVGRDGYLRVFDYSK 310 (528)
Q Consensus 234 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l--~~spdg-~~l~s~~~dg~i~vwd~~~ 310 (528)
+|++||++.. ..+...+.+|...|.+| .|+|++ .+|++++.|++|+|||+++
T Consensus 288 tV~lWD~~~~-------------------------~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 288 FVAEFDLTDP-------------------------EVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp EEEEEETTBC-------------------------SSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred EEEEEECCCC-------------------------CCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 9999999752 13455678899999999 578888 8999999999999999998
Q ss_pred ceEEeeecccCC--CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCcccee
Q 009715 311 EQLICGGKSYYG--ALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVM 388 (528)
Q Consensus 311 ~~~~~~~~~~~~--~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~ 388 (528)
++++..+.+|.. .|.+++|+|+++.+++++.|+.|++||++++.++..+.+|...|++|+|+| +|
T Consensus 343 ~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp-------~g------ 409 (524)
T 2j04_B 343 IATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSR-------LH------ 409 (524)
T ss_dssp HHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCS-------SC------
T ss_pred CCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCC-------CC------
Confidence 877666666653 588999999999999999999999999999998888899999999999999 99
Q ss_pred EEEEEEeCCCeEEEEEccCCeEEEEeecCC------CCCCCeecCCCCCccCCceeeeecCCCCceeeecC-CCCceEEe
Q 009715 389 YRFGSVGQDTRLLLWDLEMDEIVVPLRRGP------LGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVP-KLSPLVAH 461 (528)
Q Consensus 389 ~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~------~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~-~~~~~~~~ 461 (528)
.+|++|+.|++|++||+..+ ....+.... .+..++|++++. .+.. .....+|+.. +...+..+
T Consensus 410 ~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~------~~~~---~~~~~~~~~~~~g~~~~~l 479 (524)
T 2j04_B 410 PMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDD------KYRI---DSSYEVYPLTVNDVSKAKI 479 (524)
T ss_dssp CBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSC------EEEE---CCCCCCCC-----------
T ss_pred CeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCC------eEEc---cCCceecccccCCcceeee
Confidence 68999999999999998653 221111000 122456666653 1111 1112233222 34566778
Q ss_pred ecCCCCeEEEEEeCC-----eEEEEECCCeEEEEeCCCCc
Q 009715 462 RVHTEPLSGLIFTQE-----SVLTVCREGHIKIWMRPGVA 496 (528)
Q Consensus 462 ~~h~~~V~~l~~s~d-----~l~t~s~Dg~i~iW~~~~~~ 496 (528)
.+|...|.+|+|+|+ .|++|+.||.||||++..+.
T Consensus 480 ~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 480 DAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp --CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred cCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccccc
Confidence 899999999999998 38899999999999987753
No 65
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.4e-34 Score=293.14 Aligned_cols=278 Identities=13% Similarity=0.119 Sum_probs=207.0
Q ss_pred CCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeC-CCcEEEEEeCCceEEEEEcCCCCC
Q 009715 167 DGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPG-GDGAFVVGHADGNLYVYEKSKDGA 245 (528)
Q Consensus 167 ~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~-g~~~l~tg~~dg~v~vwd~~~~~~ 245 (528)
+++.|++|+.||.|++||+..... . .......|...|++|+|+|. +. +|++|+.||+|++||++..
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~-----~-----~~~~~~gH~~~V~~l~f~p~~~~-~l~s~s~D~~v~iwd~~~~-- 197 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDK-----P-----TFIKGIGAGGSITGLKFNPLNTN-QFYASSMEGTTRLQDFKGN-- 197 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSC-----C-----EEECCCSSSCCCCEEEECSSCTT-EEEEECSSSCEEEEETTSC--
T ss_pred CCCEEEEEeCCCEEEEEECCCCCc-----e-----eEEEccCCCCCEEEEEEeCCCCC-EEEEEeCCCEEEEeeccCC--
Confidence 456889999999999999875211 0 01112249999999999985 55 9999999999999998741
Q ss_pred CCCccccccccceeEEeccCCCCCCCeEEE---eecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCC
Q 009715 246 GDSSFPVIKDQTQFSVAHPRYSKSNPIARW---HICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYG 322 (528)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 322 (528)
.+..+ +.+...+.+++|+|++.+|++|+.||.|++||++ ++.+..+.+|..
T Consensus 198 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~ 251 (435)
T 4e54_B 198 -------------------------ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKK 251 (435)
T ss_dssp -------------------------EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSS
T ss_pred -------------------------ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccc
Confidence 11111 1223567899999999999999999999999997 556677889999
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeEEE---EeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCC
Q 009715 323 ALLCCAWSMDGK-YILTGGEDDLVQVWSMEDRKVVA---WGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT 398 (528)
Q Consensus 323 ~v~~l~~sp~g~-~l~sg~~dg~v~vwd~~~~~~~~---~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~ 398 (528)
.|.+++|+|+++ +|++|+.|+.|+|||+++.+... ...+|...|++++|+| || .+|++++.|+
T Consensus 252 ~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-------dg------~~l~s~~~D~ 318 (435)
T 4e54_B 252 KVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-------DG------ARLLTTDQKS 318 (435)
T ss_dssp CEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-------TS------SEEEEEESSS
T ss_pred eEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECC-------CC------CeeEEEcCCC
Confidence 999999999886 78899999999999998865433 3357999999999999 99 6999999999
Q ss_pred eEEEEEccCCeEEEEeecCCC-------CCCCeecCCCCCc----cCC--ceeeeecCCCCceeeecCCCCceEEee-cC
Q 009715 399 RLLLWDLEMDEIVVPLRRGPL-------GGSPTFSTGSQSA----HWD--NVCPVGTLQPAPSMRDVPKLSPLVAHR-VH 464 (528)
Q Consensus 399 ~i~lwd~~~~~~~~~~~~~~~-------~~~~~~s~~~~~~----~~d--~~~~~g~~~~~~~~~d~~~~~~~~~~~-~h 464 (528)
.|++||++++++...+..... .....+.+.+... ..+ ..+..+..+..+++||..+.+.+..+. +|
T Consensus 319 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~ 398 (435)
T 4e54_B 319 EIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE 398 (435)
T ss_dssp CEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSS
T ss_pred EEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCC
Confidence 999999999887766643221 1122333333210 011 111233344578999999998887765 68
Q ss_pred CCCeEEE-EEeCCe--EEEEECCCeEEEEeCCCCcc
Q 009715 465 TEPLSGL-IFTQES--VLTVCREGHIKIWMRPGVAE 497 (528)
Q Consensus 465 ~~~V~~l-~~s~d~--l~t~s~Dg~i~iW~~~~~~~ 497 (528)
...|.++ +|+|++ |++ +.|+.|+||++..++.
T Consensus 399 ~~~v~s~~~fspdg~~las-g~d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 399 SSGISSLNEFNPMGDTLAS-AMGYHILIWSQQEART 433 (435)
T ss_dssp CCCCCCEEEECTTSSCEEE-ECSSEEEECCCC----
T ss_pred CCcEEEEEEECCCCCEEEE-EcCCcEEEEECCcCee
Confidence 8889887 699985 555 4589999999987653
No 66
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.3e-33 Score=278.55 Aligned_cols=315 Identities=14% Similarity=0.087 Sum_probs=233.1
Q ss_pred cCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcE--EEEeCCCCCCC------CCCCCeEEEEec
Q 009715 105 FGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAI--FISDLNSQDKD------AKDGHDLLIGLN 176 (528)
Q Consensus 105 f~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i--~v~~~~~~~~~------~~~~~~l~~g~~ 176 (528)
|..|.+.|+++.|+| ++.++++++. ++.+.+|+..... .+..+..+... +++++.|++++.
T Consensus 4 ~~~~~~~i~~~~~s~-~~~~l~~~~~----------d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 72 (372)
T 1k8k_C 4 HSFLVEPISCHAWNK-DRTQIAICPN----------NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT 72 (372)
T ss_dssp EESCSSCCCEEEECT-TSSEEEEECS----------SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET
T ss_pred ecccCCCeEEEEECC-CCCEEEEEeC----------CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC
Confidence 445999999999998 5666665553 7888888876653 44444433322 789999999999
Q ss_pred CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCcccccccc
Q 009715 177 SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQ 256 (528)
Q Consensus 177 ~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~ 256 (528)
||.|++||+.... ...... ...|...|.+++|+|+++ +|++++.||.|++||+.......
T Consensus 73 dg~i~vwd~~~~~------~~~~~~----~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~--------- 132 (372)
T 1k8k_C 73 DRNAYVWTLKGRT------WKPTLV----ILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWW--------- 132 (372)
T ss_dssp TSCEEEEEEETTE------EEEEEE----CCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEE---------
T ss_pred CCeEEEEECCCCe------eeeeEE----eecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcce---------
Confidence 9999999997621 111111 123888999999999998 99999999999999997532100
Q ss_pred ceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEec------------------CCceEEeeec
Q 009715 257 TQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDY------------------SKEQLICGGK 318 (528)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~------------------~~~~~~~~~~ 318 (528)
........|...|.+++|+|++++|++++.|+.|++||+ ..++.+..+.
T Consensus 133 -------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (372)
T 1k8k_C 133 -------------VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS 199 (372)
T ss_dssp -------------EEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC
T ss_pred -------------eeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC
Confidence 001122446789999999999999999999999999995 4678888888
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCC
Q 009715 319 SYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT 398 (528)
Q Consensus 319 ~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~ 398 (528)
.|...|.+++|+|++++|++++.|+.|++||+++++++..+..|...|.+++|+| ++ .+|+++ .|+
T Consensus 200 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-------~~------~~l~~~-~d~ 265 (372)
T 1k8k_C 200 SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFIT-------ES------SLVAAG-HDC 265 (372)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEE-------TT------EEEEEE-TTS
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEec-------CC------CEEEEE-eCC
Confidence 8999999999999999999999999999999999999999999999999999999 98 666666 999
Q ss_pred eEEEEEccC--CeEE--EEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceee---ecCCCCc------eEEeecCC
Q 009715 399 RLLLWDLEM--DEIV--VPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMR---DVPKLSP------LVAHRVHT 465 (528)
Q Consensus 399 ~i~lwd~~~--~~~~--~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~---d~~~~~~------~~~~~~h~ 465 (528)
.|++||+.. ++.. ..+.... .. .. .....+.+| +...... .....+|.
T Consensus 266 ~i~i~~~~~~~~~~~~~~~~~~~~--~~----~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 326 (372)
T 1k8k_C 266 FPVLFTYDSAAGKLSFGGRLDVPK--QS----SQ-------------RGLTARERFQNLDKKASSEGSAAAGAGLDSLHK 326 (372)
T ss_dssp SCEEEEEETTTTEEEECCCCCCC---------------------------CHHHHHHHCCCCC---------CCCSSSSS
T ss_pred eEEEEEccCcCceEEEeeccCccc--cc----hh-------------hhcchhhhhhhcccccccccCcccccccccccc
Confidence 999999988 6422 1111100 00 00 000112222 2111111 11224899
Q ss_pred CCeEEEEEe-CC-----eEEEEECCCeEEEEeCCCCc
Q 009715 466 EPLSGLIFT-QE-----SVLTVCREGHIKIWMRPGVA 496 (528)
Q Consensus 466 ~~V~~l~~s-~d-----~l~t~s~Dg~i~iW~~~~~~ 496 (528)
..|++++|. ++ .|+|++.||.|++|++...+
T Consensus 327 ~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 327 NSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp SCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred CCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 999999976 54 59999999999999987644
No 67
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.6e-32 Score=278.67 Aligned_cols=272 Identities=16% Similarity=0.270 Sum_probs=224.9
Q ss_pred CCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCC
Q 009715 168 GHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGD 247 (528)
Q Consensus 168 ~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~ 247 (528)
++.|++|. |+.|++||+.+. +.. ... ....|...|++|+|+|+|+ +|++|+.||.|+|||+.+
T Consensus 116 ~n~lAvgl-d~tV~lWd~~tg-----~~~-~~~----~~~~~~~~V~sv~fspdg~-~lasgs~Dg~v~iWd~~~----- 178 (420)
T 4gga_A 116 GNVLAVAL-DNSVYLWSASSG-----DIL-QLL----QMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQ----- 178 (420)
T ss_dssp TSEEEEEE-TTEEEEEETTTC-----CEE-EEE----ECCSTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTT-----
T ss_pred CCEEEEEe-CCEEEEEECCCC-----CEE-EEE----EecCCCCcEEEEEECCCCC-EEEEEECCCeEEEEEcCC-----
Confidence 45777776 899999999862 111 111 1223788999999999999 999999999999999975
Q ss_pred CccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCc-eEEeeecccCCCeEE
Q 009715 248 SSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKE-QLICGGKSYYGALLC 326 (528)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~ 326 (528)
...+..+.+|...+.+++++ +.+|++++.|+.+++||.... ..+..+.+|...+..
T Consensus 179 ---------------------~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~ 235 (420)
T 4gga_A 179 ---------------------QKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCG 235 (420)
T ss_dssp ---------------------TEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEE
T ss_pred ---------------------CcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceee
Confidence 24567778899999998885 679999999999999998764 556778889999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCe----EEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEE--EeCCCeE
Q 009715 327 CAWSMDGKYILTGGEDDLVQVWSMEDRK----VVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGS--VGQDTRL 400 (528)
Q Consensus 327 l~~sp~g~~l~sg~~dg~v~vwd~~~~~----~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s--~s~D~~i 400 (528)
+.|+|+++++++++.|+.|++||...++ .+.....|...|.+++|+| ++. .++++ |+.|++|
T Consensus 236 ~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p-------~~~-----~~la~~~gs~D~~I 303 (420)
T 4gga_A 236 LRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCP-------WQS-----NVLATGGGTSDRHI 303 (420)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECT-------TCT-----TEEEEEECTTTCEE
T ss_pred eeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCC-------Ccc-----cEEEEEeecCCCEE
Confidence 9999999999999999999999998764 3556678999999999999 542 34444 5689999
Q ss_pred EEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCcee-eeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--
Q 009715 401 LLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVC-PVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES-- 477 (528)
Q Consensus 401 ~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~-~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-- 477 (528)
++||+.++++...+.....+..+.+++++. ..+ ..|..++.+++||+++.+++..+.+|.+.|++|+|+||+
T Consensus 304 ~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~-----~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~ 378 (420)
T 4gga_A 304 RIWNVCSGACLSAVDAHSQVCSILWSPHYK-----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGAT 378 (420)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEEETTTT-----EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSC
T ss_pred EEEeCCccccceeeccccceeeeeecCCCC-----eEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 999999999999998877777777777652 122 345578999999999999999999999999999999985
Q ss_pred EEEEECCCeEEEEeCCCCc
Q 009715 478 VLTVCREGHIKIWMRPGVA 496 (528)
Q Consensus 478 l~t~s~Dg~i~iW~~~~~~ 496 (528)
|+||+.|++|+|||+....
T Consensus 379 l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 379 VASAAADETLRLWRCFELD 397 (420)
T ss_dssp EEEEETTTEEEEECCSCSS
T ss_pred EEEEecCCeEEEEECCCCC
Confidence 9999999999999986543
No 68
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-33 Score=282.26 Aligned_cols=329 Identities=13% Similarity=0.053 Sum_probs=219.8
Q ss_pred cCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCc--EEEEeCCCCCCC------CCCCCeEEEEec
Q 009715 105 FGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDA--IFISDLNSQDKD------AKDGHDLLIGLN 176 (528)
Q Consensus 105 f~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~--i~v~~~~~~~~~------~~~~~~l~~g~~ 176 (528)
+..|.+.|++++|+| ++.++++++. ++.+.+|+.... ..+..+..+... ++++++|++++.
T Consensus 7 ~~~~~~~v~~~~~s~-~g~~l~~~~~----------d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 75 (377)
T 3dwl_C 7 LHILPKPSYEHAFNS-QRTEFVTTTA----------TNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ 75 (377)
T ss_dssp EEECSSCCSCCEECS-SSSEEECCCS----------SSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET
T ss_pred EecCCCcEEEEEECC-CCCEEEEecC----------CCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC
Confidence 445778999999999 6777777764 678888877654 444455544333 889999999999
Q ss_pred CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCcccccccc
Q 009715 177 SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQ 256 (528)
Q Consensus 177 ~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~ 256 (528)
||.|++||+.... ...... ....|...|++++|+|+++ +|++++.|+.|++||++....
T Consensus 76 d~~v~vwd~~~~~-----~~~~~~----~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~----------- 134 (377)
T 3dwl_C 76 DRNAYVYEKRPDG-----TWKQTL----VLLRLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQEND----------- 134 (377)
T ss_dssp TSSEEEC-----------CCCCEE----ECCCCSSCEEEEECCTTSS-CCEEEESSSCEEECCC----------------
T ss_pred CCeEEEEEcCCCC-----ceeeee----EecccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCccc-----------
Confidence 9999999998622 000011 1123889999999999999 899999999999999975321
Q ss_pred ceeEEeccCCCCCCCeEEEee-cCCCeEEEEECCCCCEEEEEeCCCcEEEEecC------------------CceEEeee
Q 009715 257 TQFSVAHPRYSKSNPIARWHI-CQGSINSIAFSTDGTYLATVGRDGYLRVFDYS------------------KEQLICGG 317 (528)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~------------------~~~~~~~~ 317 (528)
......+.. |...|.+++|+|++++|++++.|+.|++||+. .++++..+
T Consensus 135 ------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (377)
T 3dwl_C 135 ------------WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY 202 (377)
T ss_dssp ------------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC
T ss_pred ------------ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc
Confidence 123455566 88999999999999999999999999999985 35667777
Q ss_pred cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE----EEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEE
Q 009715 318 KSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKV----VAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGS 393 (528)
Q Consensus 318 ~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~----~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s 393 (528)
.|...|.+++|+|++++|++++.|+.|++||+++++. +..+.+|...|.+++|+| || .+|++
T Consensus 203 -~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~-------~~------~~l~~ 268 (377)
T 3dwl_C 203 -PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWAN-------ES------AIVAA 268 (377)
T ss_dssp -CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEE-------TT------EEEEE
T ss_pred -cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcC-------CC------CEEEE
Confidence 8999999999999999999999999999999999877 788889999999999999 99 78888
Q ss_pred EeCCCeEEEEEccCCe--EEEEeecCCCCCCCeecCCCC-CccCCceeeeecCCCCceeeecCC--CCceEEeecCCCCe
Q 009715 394 VGQDTRLLLWDLEMDE--IVVPLRRGPLGGSPTFSTGSQ-SAHWDNVCPVGTLQPAPSMRDVPK--LSPLVAHRVHTEPL 468 (528)
Q Consensus 394 ~s~D~~i~lwd~~~~~--~~~~~~~~~~~~~~~~s~~~~-~~~~d~~~~~g~~~~~~~~~d~~~--~~~~~~~~~h~~~V 468 (528)
++.|+.+ +|+..... ....+................ .......+............+... .........|...|
T Consensus 269 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i 347 (377)
T 3dwl_C 269 GYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMI 347 (377)
T ss_dssp ESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCE
T ss_pred EcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCcccccee
Confidence 8766655 77665322 111111111000000000000 000000000000000000001000 01112233699999
Q ss_pred EEEEEeCC------eEEEEECCCeEEEEeC
Q 009715 469 SGLIFTQE------SVLTVCREGHIKIWMR 492 (528)
Q Consensus 469 ~~l~~s~d------~l~t~s~Dg~i~iW~~ 492 (528)
+++++.++ .|+|+|.||.|+|||+
T Consensus 348 ~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 348 ATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred EEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 99998764 3999999999999985
No 69
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.2e-33 Score=276.83 Aligned_cols=307 Identities=13% Similarity=0.134 Sum_probs=226.6
Q ss_pred eccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCc--EEEEeCCCCCCC-----CCC---CCeEE
Q 009715 103 LGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDA--IFISDLNSQDKD-----AKD---GHDLL 172 (528)
Q Consensus 103 ~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~--i~v~~~~~~~~~-----~~~---~~~l~ 172 (528)
..+.+|.+.|.++.|+|....++++++. ...++.+.+|+.... .....+...... +++ +..|+
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~-------~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 84 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNF-------ARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLA 84 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC---------CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEE
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCc-------cCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEE
Confidence 4567999999999999944355555541 013788888887553 223222221111 565 79999
Q ss_pred EEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEE------eeCCCcEEEEEeCCceEEEEEcCCCCCC
Q 009715 173 IGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTW------VPGGDGAFVVGHADGNLYVYEKSKDGAG 246 (528)
Q Consensus 173 ~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~------~p~g~~~l~tg~~dg~v~vwd~~~~~~~ 246 (528)
+|+.+|.|++||+.... ... . ....|...|.+++| +|+++ +|++++.||.|++||+.....
T Consensus 85 ~~~~dg~i~iwd~~~~~-----~~~--~----~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~~~- 151 (357)
T 3i2n_A 85 TGDFGGNLHIWNLEAPE-----MPV--Y----SVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQKDD- 151 (357)
T ss_dssp EEETTSCEEEECTTSCS-----SCS--E----EECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSCSS-
T ss_pred EecCCCeEEEEeCCCCC-----ccE--E----EEEecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCCCC-
Confidence 99999999999998621 011 1 11238999999965 67888 999999999999999986321
Q ss_pred CCccccccccceeEEeccCCCCCCCeEEEeecC----CCeEEEE----ECCCCCEEEEEeCCCcEEEEecCCceEEeeec
Q 009715 247 DSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQ----GSINSIA----FSTDGTYLATVGRDGYLRVFDYSKEQLICGGK 318 (528)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~l~----~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~ 318 (528)
++..+..|. ..|.+++ |+|++++|++++.|+.|++||+++++.+.. .
T Consensus 152 ------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~ 206 (357)
T 3i2n_A 152 ------------------------PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-T 206 (357)
T ss_dssp ------------------------CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-E
T ss_pred ------------------------cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-c
Confidence 233333333 3788888 788999999999999999999999987654 5
Q ss_pred ccCCCeEEEEEcC---CCCEEEEEeCCCcEEEEECCCCeEEEEee-----cCCCCeEEEEEecCCCCCCCCCCccceeE-
Q 009715 319 SYYGALLCCAWSM---DGKYILTGGEDDLVQVWSMEDRKVVAWGE-----GHNSWVSGVAFDSYWSQPNSDGTAETVMY- 389 (528)
Q Consensus 319 ~~~~~v~~l~~sp---~g~~l~sg~~dg~v~vwd~~~~~~~~~~~-----~h~~~V~~v~f~p~~~~~~~dg~~~~~~~- 389 (528)
.|...|.+++|+| ++.+|++++.|+.|++||+++++++..+. +|...|.+++|+| ++ .
T Consensus 207 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~------~~ 273 (357)
T 3i2n_A 207 NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLP-------QN------RE 273 (357)
T ss_dssp ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEET-------TE------EE
T ss_pred CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECC-------CC------Cc
Confidence 6889999999999 99999999999999999998876554443 8999999999999 88 5
Q ss_pred EEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeE
Q 009715 390 RFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLS 469 (528)
Q Consensus 390 ~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~ 469 (528)
+|++++.|+.|++||++.+.............. .....+++..+.+|...|.
T Consensus 274 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~----------------------------~~~~~~~~~~~~~~~~~v~ 325 (357)
T 3i2n_A 274 LFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMG----------------------------VAGSVSLLQNVTLSTQPIS 325 (357)
T ss_dssp EEEEEETTSEEEEEEEECCSCC--CCTTSCCCC----------------------------CCCEEEEEEEEECCSSCEE
T ss_pred EEEEEeCCCcEEEeecCCCcccccccCCCCccc----------------------------cccccceeeccccCCCCee
Confidence 899999999999999987664332221000000 0011245667888999999
Q ss_pred EEEEeCCe--EE-EEECCCeEEEEeCCCC
Q 009715 470 GLIFTQES--VL-TVCREGHIKIWMRPGV 495 (528)
Q Consensus 470 ~l~~s~d~--l~-t~s~Dg~i~iW~~~~~ 495 (528)
+++|+|++ |+ +++.|+.|++|++...
T Consensus 326 ~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 326 SLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 99999985 76 8999999999998764
No 70
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.9e-33 Score=277.82 Aligned_cols=271 Identities=17% Similarity=0.187 Sum_probs=225.9
Q ss_pred ccCCceeEEEEeeC---CCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEe-----ecC
Q 009715 208 VNNSRCTSVTWVPG---GDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWH-----ICQ 279 (528)
Q Consensus 208 ~h~~~v~~l~~~p~---g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~h~ 279 (528)
.|..+|++++|+|+ +...+++++.++.|++|++.... .+..+. .|.
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~--------------------------~~~~~~~~~~~~~~ 69 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQG--------------------------EIRLLQSYVDADAD 69 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGG--------------------------CEEEEEEEECSCTT
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCc--------------------------EEEeeeeccccCCC
Confidence 39999999999984 44478888888899999997521 122222 256
Q ss_pred CCeEEEEECCC----CCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCe
Q 009715 280 GSINSIAFSTD----GTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSM-DGKYILTGGEDDLVQVWSMEDRK 354 (528)
Q Consensus 280 ~~v~~l~~spd----g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp-~g~~l~sg~~dg~v~vwd~~~~~ 354 (528)
..|.+++|+|+ +.+|++++.||.|++||+.+++.+..+..|...|.+++|+| ++++|++++.|+.|++||+++++
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT 149 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe
Confidence 88999999998 67999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred EEEEe---ecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEee----------------
Q 009715 355 VVAWG---EGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLR---------------- 415 (528)
Q Consensus 355 ~~~~~---~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~---------------- 415 (528)
.+..+ .+|...|.+++|+| ++ .+|++++.|+.|++||+++++....+.
T Consensus 150 ~~~~~~~~~~~~~~v~~~~~~~-------~~------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (366)
T 3k26_A 150 LVAIFGGVEGHRDEVLSADYDL-------LG------EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFIS 216 (366)
T ss_dssp EEEEECSTTSCSSCEEEEEECT-------TS------SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCC
T ss_pred EEEEecccccccCceeEEEECC-------CC------CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccc
Confidence 98888 68999999999999 88 689999999999999999876554333
Q ss_pred -------------cCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCc--------------eEEeecCCCCe
Q 009715 416 -------------RGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSP--------------LVAHRVHTEPL 468 (528)
Q Consensus 416 -------------~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~--------------~~~~~~h~~~V 468 (528)
+...+..+.|+ ...+..++.++.+++||+...+. +..+..|...|
T Consensus 217 ~~~~~~~~~~~~~~~~~v~~~~~~--------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 288 (366)
T 3k26_A 217 QKIHFPDFSTRDIHRNYVDCVRWL--------GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDI 288 (366)
T ss_dssp EEECCCSEEECSSCSSCCCEEEEE--------TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCS
T ss_pred eeeccCccccccCCcceEEEEEEc--------CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcE
Confidence 22334444443 34678888899999999887654 78888999999
Q ss_pred EEEEEeCC--e--EEEEECCCeEEEEeCCCCccc------cCCC--ccce--EEEccCCceEEEeeeeccc
Q 009715 469 SGLIFTQE--S--VLTVCREGHIKIWMRPGVAES------QSSS--SETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 469 ~~l~~s~d--~--l~t~s~Dg~i~iW~~~~~~~~------~~~~--~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
.+++|+|+ + |++++.||.|++||+..+... ...| ...| ++|+||+++|++++.+|.+
T Consensus 289 ~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 359 (366)
T 3k26_A 289 WYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASI 359 (366)
T ss_dssp SCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEE
Confidence 99999987 4 999999999999999876532 2344 5666 8899999999999988765
No 71
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=9e-32 Score=277.98 Aligned_cols=292 Identities=18% Similarity=0.227 Sum_probs=238.1
Q ss_pred CCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCC
Q 009715 166 KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGA 245 (528)
Q Consensus 166 ~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~ 245 (528)
.+++.|++|+.||.|++||+.+. +. ......|...|++++|+|++ +|++|+.||+|++||+.+.
T Consensus 130 ~~~~~l~sgs~dg~i~vwd~~~~-----~~-------~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~-- 193 (464)
T 3v7d_B 130 FEDNYVITGADDKMIRVYDSINK-----KF-------LLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKG-- 193 (464)
T ss_dssp EETTEEEEEETTSCEEEEETTTT-----EE-------EEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTT--
T ss_pred ECCCEEEEEcCCCcEEEEECCCC-----cE-------EEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCC--
Confidence 45679999999999999998762 11 11122499999999999887 7999999999999999752
Q ss_pred CCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEEC--CCCCEEEEEeCCCcEEEEecCCce-----------
Q 009715 246 GDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFS--TDGTYLATVGRDGYLRVFDYSKEQ----------- 312 (528)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s--pdg~~l~s~~~dg~i~vwd~~~~~----------- 312 (528)
..+..+.+|...|.+++|+ +++.+|++++.|+.|++||+.+++
T Consensus 194 ------------------------~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~ 249 (464)
T 3v7d_B 194 ------------------------CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 249 (464)
T ss_dssp ------------------------EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCS
T ss_pred ------------------------cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCc
Confidence 3456777899999999998 578999999999999999998765
Q ss_pred ------------EEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCC
Q 009715 313 ------------LICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNS 380 (528)
Q Consensus 313 ------------~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~ 380 (528)
.+..+.+|...+.++ +++++++++++.|+.|++||+++++++..+.+|...|.+++|+|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~------- 320 (464)
T 3v7d_B 250 PLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDH------- 320 (464)
T ss_dssp SEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET-------
T ss_pred ceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcC-------
Confidence 245567788888776 67899999999999999999999999999999999999999999
Q ss_pred CCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC-CCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceE
Q 009715 381 DGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG-PLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLV 459 (528)
Q Consensus 381 dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~ 459 (528)
++ .+|++++.|+.|++||+++++++..+..+ ..+..+.++ +..+..++.++.+++||+.......
T Consensus 321 ~~------~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--------~~~l~s~s~dg~v~vwd~~~~~~~~ 386 (464)
T 3v7d_B 321 ER------KRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--------DKFLVSAAADGSIRGWDANDYSRKF 386 (464)
T ss_dssp TT------TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--------SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CC------CEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--------CCEEEEEeCCCcEEEEECCCCceee
Confidence 88 68999999999999999999999888653 233444443 2567888999999999999877665
Q ss_pred EeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCccc---cCCCccceEEEccCCceEEEeeee
Q 009715 460 AHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAES---QSSSSETVLSTSSKDKPLLSSKVV 522 (528)
Q Consensus 460 ~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~---~~~~~~~vl~~spd~~~l~s~~~~ 522 (528)
.. .|...+..++|++++ |++++ ||.|++||+.+++.. ...+...|.++..+++.++++..+
T Consensus 387 ~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~ 452 (464)
T 3v7d_B 387 SY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEK 452 (464)
T ss_dssp EE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEE
T ss_pred ee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEe
Confidence 55 366778888999874 66666 999999999987744 346777786666667777766544
No 72
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.3e-32 Score=295.88 Aligned_cols=279 Identities=18% Similarity=0.246 Sum_probs=231.8
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|...|++|+|+|++..+|++|+.|++|++|++...... .......+.+|...|.+++|
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~---------------------~~~~~~~~~~h~~~v~~v~~ 438 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA---------------------YGVAQRRLTGHSHFVEDVVL 438 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC---------------------SCEEEEEEECCSSCEEEEEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc---------------------cccccceecCCCCcEEEEEE
Confidence 599999999999987559999999999999999753211 01234567889999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEe---ecCCC
Q 009715 288 STDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWG---EGHNS 364 (528)
Q Consensus 288 spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~---~~h~~ 364 (528)
+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|+.|+|||+......... .+|..
T Consensus 439 s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~ 518 (694)
T 3dm0_A 439 SSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRD 518 (694)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSS
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999998765443332 46999
Q ss_pred CeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC-CCCCCCeecCCCCCccCCceeeeecC
Q 009715 365 WVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG-PLGGSPTFSTGSQSAHWDNVCPVGTL 443 (528)
Q Consensus 365 ~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~d~~~~~g~~ 443 (528)
.|.+++|+| ++.. ..|++++.|++|++||+++++++..+..+ ..+..+.|++++ ..+..++.
T Consensus 519 ~v~~~~~~~-------~~~~----~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg------~~l~sg~~ 581 (694)
T 3dm0_A 519 WVSCVRFSP-------NTLQ----PTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG------SLCASGGK 581 (694)
T ss_dssp CEEEEEECS-------CSSS----CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS------SEEEEEET
T ss_pred cEEEEEEeC-------CCCc----ceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCC------CEEEEEeC
Confidence 999999999 6511 37999999999999999999988887643 456778888876 56788999
Q ss_pred CCCceeeecCCCCceEEeecCCCCeEEEEEeCCe-EEEEECCCeEEEEeCCCCccccC--C-------------------
Q 009715 444 QPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES-VLTVCREGHIKIWMRPGVAESQS--S------------------- 501 (528)
Q Consensus 444 ~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-l~t~s~Dg~i~iW~~~~~~~~~~--~------------------- 501 (528)
++.+++||+...+.+..+.. ...|.+++|+|++ +++++.|+.|+|||+.++..... .
T Consensus 582 Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (694)
T 3dm0_A 582 DGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKR 660 (694)
T ss_dssp TSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------
T ss_pred CCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCc
Confidence 99999999999988877654 5679999999985 77777788899999987652211 0
Q ss_pred Cccce--EEEccCCceEEEeeeeccc
Q 009715 502 SSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 502 ~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
+...+ ++|+|||++|++++.+|.+
T Consensus 661 ~~~~~~~l~~spdg~~l~sgs~Dg~i 686 (694)
T 3dm0_A 661 KVIYCTSLNWSADGSTLFSGYTDGVI 686 (694)
T ss_dssp CCCCEEEEEECTTSSEEEEEETTSEE
T ss_pred eeEEeeeEEEcCCCCEEEEEcCCCeE
Confidence 00112 7889999999999988765
No 73
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1e-32 Score=274.04 Aligned_cols=278 Identities=18% Similarity=0.170 Sum_probs=225.5
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeC---CceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHA---DGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINS 284 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~---dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 284 (528)
.|...|++++|+|++..++++++. ||.|++||+..... .......|...|.+
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~-------------------------~~~~~~~~~~~v~~ 70 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL-------------------------KLLREIEKAKPIKC 70 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE-------------------------EEEEEEEESSCEEE
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc-------------------------cceeeecccCcEEE
Confidence 399999999999999756667776 99999999975210 11122357899999
Q ss_pred EEECCC---CCEEEEEeCCCcEEEEecCCce-EEeeecccCCCeEEEEE------cCCCCEEEEEeCCCcEEEEECCCCe
Q 009715 285 IAFSTD---GTYLATVGRDGYLRVFDYSKEQ-LICGGKSYYGALLCCAW------SMDGKYILTGGEDDLVQVWSMEDRK 354 (528)
Q Consensus 285 l~~spd---g~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~v~~l~~------sp~g~~l~sg~~dg~v~vwd~~~~~ 354 (528)
++|+|+ +.+|++++.|+.|++||+.+++ .+..+..|...|.+++| +|++++|++++.|+.|++||+++++
T Consensus 71 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 71 GTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp EECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred EEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 999998 7999999999999999999887 77888899999999954 6899999999999999999999886
Q ss_pred -EEEEeecCCC----CeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecC--
Q 009715 355 -VVAWGEGHNS----WVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFST-- 427 (528)
Q Consensus 355 -~~~~~~~h~~----~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~-- 427 (528)
++..+..|.. .|.+++|.+.+.+ ++ .+|++++.|+.|++||+++++......+...+..+.|++
T Consensus 151 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~ 221 (357)
T 3i2n_A 151 DPVANMEPVQGENKRDCWTVAFGNAYNQ---EE------RVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKD 221 (357)
T ss_dssp SCSEEECCCTTSCCCCEEEEEEECCCC----CC------CEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSS
T ss_pred CcceeccccCCCCCCceEEEEEEeccCC---CC------CEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCC
Confidence 6777766554 8999995432222 77 699999999999999999999887777767777888887
Q ss_pred -CCCCccCCceeeeecCCCCceeeecCCCCceEEee-----cCCCCeEEEEEeCC---eEEEEECCCeEEEEeCCCCccc
Q 009715 428 -GSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHR-----VHTEPLSGLIFTQE---SVLTVCREGHIKIWMRPGVAES 498 (528)
Q Consensus 428 -~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~-----~h~~~V~~l~~s~d---~l~t~s~Dg~i~iW~~~~~~~~ 498 (528)
++ ..+.++..++.+++||++..+++..+. +|...|.+++|+|+ .|++++.||.|++||+......
T Consensus 222 ~~~------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 222 ISM------NKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp SSC------CEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred CCC------CEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 43 567788899999999998776655554 89999999999997 3899999999999998754321
Q ss_pred ---------------------cCCCccce--EEEccCCceEE-Eeeeeccc
Q 009715 499 ---------------------QSSSSETV--LSTSSKDKPLL-SSKVVTSS 525 (528)
Q Consensus 499 ---------------------~~~~~~~v--l~~spd~~~l~-s~~~~gs~ 525 (528)
...|...| ++|+|++++|+ +++.+|.+
T Consensus 296 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i 346 (357)
T 3i2n_A 296 SKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTV 346 (357)
T ss_dssp --CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEE
T ss_pred ccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcE
Confidence 23466677 88999999998 78777654
No 74
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.4e-33 Score=273.17 Aligned_cols=242 Identities=17% Similarity=0.240 Sum_probs=189.9
Q ss_pred CCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeC--CCcEEEEEeCCceEEEEEcCCC
Q 009715 166 KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPG--GDGAFVVGHADGNLYVYEKSKD 243 (528)
Q Consensus 166 ~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--g~~~l~tg~~dg~v~vwd~~~~ 243 (528)
++++.|++|+.||.|++||+..... .. ......|...|++++|+|+ +. +|++|+.|++|++||++..
T Consensus 23 ~~g~~lasgs~D~~v~lwd~~~~~~----~~------~~~l~gH~~~V~~v~~~~~~~~~-~l~s~s~D~~v~iWd~~~~ 91 (316)
T 3bg1_A 23 YYGTRLATCSSDRSVKIFDVRNGGQ----IL------IADLRGHEGPVWQVAWAHPMYGN-ILASCSYDRKVIIWREENG 91 (316)
T ss_dssp GGGCEEEEEETTTEEEEEEEETTEE----EE------EEEEECCSSCEEEEEECCGGGSS-CEEEEETTSCEEEECCSSS
T ss_pred CCCCEEEEEeCCCeEEEEEecCCCc----EE------EEEEcCCCccEEEEEeCCCCCCC-EEEEEECCCEEEEEECCCC
Confidence 4566788999999999999875210 01 1112249999999999863 66 8999999999999998752
Q ss_pred CCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC--CCEEEEEeCCCcEEEEecCCce---EEeeec
Q 009715 244 GAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD--GTYLATVGRDGYLRVFDYSKEQ---LICGGK 318 (528)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd--g~~l~s~~~dg~i~vwd~~~~~---~~~~~~ 318 (528)
. ...+..+.+|...|.+++|+|+ +.+|++++.|+.|++||++.+. ....+.
T Consensus 92 ~------------------------~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~ 147 (316)
T 3bg1_A 92 T------------------------WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINN 147 (316)
T ss_dssp C------------------------CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTT
T ss_pred c------------------------ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeec
Confidence 1 1244566788999999999997 8899999999999999998753 235567
Q ss_pred ccCCCeEEEEEcCC-----------------CCEEEEEeCCCcEEEEECCCC---eEEEEeecCCCCeEEEEEecCCCCC
Q 009715 319 SYYGALLCCAWSMD-----------------GKYILTGGEDDLVQVWSMEDR---KVVAWGEGHNSWVSGVAFDSYWSQP 378 (528)
Q Consensus 319 ~~~~~v~~l~~sp~-----------------g~~l~sg~~dg~v~vwd~~~~---~~~~~~~~h~~~V~~v~f~p~~~~~ 378 (528)
.|...|.+++|+|+ +++|++|+.|+.|++||++.. +++..+.+|..+|.+++|+|
T Consensus 148 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp----- 222 (316)
T 3bg1_A 148 AHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP----- 222 (316)
T ss_dssp SSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC-----
T ss_pred cccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC-----
Confidence 78999999999997 478999999999999999764 56778899999999999999
Q ss_pred CCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCce
Q 009715 379 NSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPL 458 (528)
Q Consensus 379 ~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~ 458 (528)
++. ....+|++++.|++|++||+....... ...
T Consensus 223 --~~~--~~~~~las~s~D~~v~iw~~~~~~~~~-------------------------------------------~~~ 255 (316)
T 3bg1_A 223 --SIG--LPTSTIASCSQDGRVFIWTCDDASSNT-------------------------------------------WSP 255 (316)
T ss_dssp --CSS--CSCCEEEEEETTCEEEEEECSSTTCCC-------------------------------------------CBC
T ss_pred --CCC--CCCceEEEEcCCCeEEEEEccCccccc-------------------------------------------hhh
Confidence 641 001489999999999999987531000 001
Q ss_pred EEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCC
Q 009715 459 VAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPG 494 (528)
Q Consensus 459 ~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~ 494 (528)
..+..|...|.+++|+|++ |++++.|++|+||+...
T Consensus 256 ~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 256 KLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred hhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 1234688999999999975 99999999999999753
No 75
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.1e-33 Score=274.24 Aligned_cols=242 Identities=15% Similarity=0.202 Sum_probs=192.6
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|...|++++|+|+|+ +|++|+.|++|+|||+..+. ...+..+.+|.+.|.+++|
T Consensus 11 ~H~~~V~~v~~s~~g~-~lasgs~D~~v~lwd~~~~~------------------------~~~~~~l~gH~~~V~~v~~ 65 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGT-RLATCSSDRSVKIFDVRNGG------------------------QILIADLRGHEGPVWQVAW 65 (316)
T ss_dssp ---CCEEEEEECGGGC-EEEEEETTTEEEEEEEETTE------------------------EEEEEEEECCSSCEEEEEE
T ss_pred cccCeEEEeeEcCCCC-EEEEEeCCCeEEEEEecCCC------------------------cEEEEEEcCCCccEEEEEe
Confidence 4999999999999999 99999999999999987421 1135667889999999999
Q ss_pred CC--CCCEEEEEeCCCcEEEEecCCc--eEEeeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCe---EEEE
Q 009715 288 ST--DGTYLATVGRDGYLRVFDYSKE--QLICGGKSYYGALLCCAWSMD--GKYILTGGEDDLVQVWSMEDRK---VVAW 358 (528)
Q Consensus 288 sp--dg~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~v~~l~~sp~--g~~l~sg~~dg~v~vwd~~~~~---~~~~ 358 (528)
++ ++++|++++.|+.|++||++++ +.+..+.+|...|.+++|+|+ +.+|++|+.|+.|++||++.+. ....
T Consensus 66 ~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~ 145 (316)
T 3bg1_A 66 AHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKI 145 (316)
T ss_dssp CCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCB
T ss_pred CCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeee
Confidence 86 4899999999999999999887 456677889999999999998 7899999999999999998753 2455
Q ss_pred eecCCCCeEEEEEecCCCCCCCCCCc-----------cceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecC
Q 009715 359 GEGHNSWVSGVAFDSYWSQPNSDGTA-----------ETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFST 427 (528)
Q Consensus 359 ~~~h~~~V~~v~f~p~~~~~~~dg~~-----------~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~ 427 (528)
+.+|...|.+++|+| ++.. .....+|++++.|++|++||++......
T Consensus 146 ~~~h~~~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~--------------- 203 (316)
T 3bg1_A 146 NNAHTIGCNAVSWAP-------AVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWK--------------- 203 (316)
T ss_dssp TTSSSSCBCCCEECC-------CCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEE---------------
T ss_pred eccccCCcceEEEcc-------ccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccc---------------
Confidence 678999999999998 4200 0001479999999999999986542111
Q ss_pred CCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCC------eEEEEECCCeEEEEeCCCCc-----
Q 009715 428 GSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQE------SVLTVCREGHIKIWMRPGVA----- 496 (528)
Q Consensus 428 ~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d------~l~t~s~Dg~i~iW~~~~~~----- 496 (528)
++..+.+|...|.+++|+|+ .|++++.|++|+||++....
T Consensus 204 -----------------------------~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~ 254 (316)
T 3bg1_A 204 -----------------------------EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWS 254 (316)
T ss_dssp -----------------------------EEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCB
T ss_pred -----------------------------eeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchh
Confidence 12234579999999999996 39999999999999987621
Q ss_pred -cccCCCccce--EEEccCCceEEEeeeeccc
Q 009715 497 -ESQSSSSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 497 -~~~~~~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
.....|...| ++|+||+++|++++.+|.+
T Consensus 255 ~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v 286 (316)
T 3bg1_A 255 PKLLHKFNDVVWHVSWSITANILAVSGGDNKV 286 (316)
T ss_dssp CCEEEECSSCEEEEEECTTTCCEEEEESSSCE
T ss_pred hhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeE
Confidence 1223466667 8899999999999888654
No 76
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.9e-32 Score=270.82 Aligned_cols=273 Identities=13% Similarity=0.153 Sum_probs=228.9
Q ss_pred cCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEEC
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFS 288 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 288 (528)
|..+|++++|+|+++ +|++++.|+.|++||+.... ...+..+..|...|.+++|+
T Consensus 7 ~~~~i~~~~~s~~~~-~l~~~~~d~~v~i~~~~~~~------------------------~~~~~~~~~h~~~v~~~~~~ 61 (372)
T 1k8k_C 7 LVEPISCHAWNKDRT-QIAICPNNHEVHIYEKSGNK------------------------WVQVHELKEHNGQVTGVDWA 61 (372)
T ss_dssp CSSCCCEEEECTTSS-EEEEECSSSEEEEEEEETTE------------------------EEEEEEEECCSSCEEEEEEE
T ss_pred cCCCeEEEEECCCCC-EEEEEeCCCEEEEEeCCCCc------------------------EEeeeeecCCCCcccEEEEe
Confidence 888999999999999 99999999999999987520 11566778899999999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCceEEee--ecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe----EEEEeecC
Q 009715 289 TDGTYLATVGRDGYLRVFDYSKEQLICG--GKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRK----VVAWGEGH 362 (528)
Q Consensus 289 pdg~~l~s~~~dg~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~----~~~~~~~h 362 (528)
|++++|++++.|+.|++||+.+++.... +..|...|.+++|+|++++|++++.|+.|++||++.++ ......+|
T Consensus 62 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~ 141 (372)
T 1k8k_C 62 PDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPI 141 (372)
T ss_dssp TTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTC
T ss_pred CCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeeccc
Confidence 9999999999999999999998875443 45688999999999999999999999999999998875 23333578
Q ss_pred CCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc------------------CCeEEEEeec-CCCCCCC
Q 009715 363 NSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE------------------MDEIVVPLRR-GPLGGSP 423 (528)
Q Consensus 363 ~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~------------------~~~~~~~~~~-~~~~~~~ 423 (528)
...|.+++|+| ++ .+|++++.|+.|++||++ .++.+..+.. ...+..+
T Consensus 142 ~~~i~~~~~~~-------~~------~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 208 (372)
T 1k8k_C 142 RSTVLSLDWHP-------NS------VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGV 208 (372)
T ss_dssp CSCEEEEEECT-------TS------SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEE
T ss_pred CCCeeEEEEcC-------CC------CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEE
Confidence 99999999999 88 689999999999999954 5677777753 3456677
Q ss_pred eecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe-EEEEECCCeEEEEeCCC--Cc----
Q 009715 424 TFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES-VLTVCREGHIKIWMRPG--VA---- 496 (528)
Q Consensus 424 ~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-l~t~s~Dg~i~iW~~~~--~~---- 496 (528)
.|++++ ..+..++.++.+++||++..+++..+..|...|.+++|+|++ +++++.|+.|++|++.. +.
T Consensus 209 ~~~~~~------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~ 282 (372)
T 1k8k_C 209 CFSANG------SRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFG 282 (372)
T ss_dssp EECSSS------SEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEEC
T ss_pred EECCCC------CEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEe
Confidence 787765 467888899999999999999999999999999999999985 55566999999999877 31
Q ss_pred -------------------------------------cccCCCccce--EEE-ccCC---ceEEEeeeeccc
Q 009715 497 -------------------------------------ESQSSSSETV--LST-SSKD---KPLLSSKVVTSS 525 (528)
Q Consensus 497 -------------------------------------~~~~~~~~~v--l~~-spd~---~~l~s~~~~gs~ 525 (528)
.....|...| +++ +++| ++|++++.+|.+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i 354 (372)
T 1k8k_C 283 GRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGM 354 (372)
T ss_dssp CCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEE
T ss_pred eccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCce
Confidence 1123678888 654 4777 999999988765
No 77
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.3e-32 Score=274.01 Aligned_cols=270 Identities=15% Similarity=0.133 Sum_probs=220.2
Q ss_pred cccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEE--eecCCCeEE
Q 009715 207 SVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARW--HICQGSINS 284 (528)
Q Consensus 207 ~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~ 284 (528)
..|...|++++|+|++..+|++|+.||.|+|||+... .....+ .+|...|.+
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--------------------------~~~~~~~~~~h~~~v~~ 123 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ--------------------------NKTSFIQGMGPGDAITG 123 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST--------------------------TCEEEECCCSTTCBEEE
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc--------------------------ccceeeecCCcCCceeE
Confidence 3489999999999999339999999999999999852 122233 358899999
Q ss_pred EEECC-CCCEEEEEeCCCcEEEEecCCceEEeeecc---cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q 009715 285 IAFST-DGTYLATVGRDGYLRVFDYSKEQLICGGKS---YYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGE 360 (528)
Q Consensus 285 l~~sp-dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~---~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~ 360 (528)
++|+| ++++|++++.|+.|++||+.. +.+..+.. |...|.+++|+|++++|++++.|+.|++||+ +++++..+.
T Consensus 124 ~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~ 201 (383)
T 3ei3_B 124 MKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEK 201 (383)
T ss_dssp EEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEE
T ss_pred EEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEec
Confidence 99999 789999999999999999996 44444443 4478999999999999999999999999999 577888999
Q ss_pred cCCCCeEEEEEecCCCCCCCCCCccceeE-EEEEEeCCCeEEEEEccC----CeEEEEeecCCCCCCCeecC-CCCCccC
Q 009715 361 GHNSWVSGVAFDSYWSQPNSDGTAETVMY-RFGSVGQDTRLLLWDLEM----DEIVVPLRRGPLGGSPTFST-GSQSAHW 434 (528)
Q Consensus 361 ~h~~~V~~v~f~p~~~~~~~dg~~~~~~~-~l~s~s~D~~i~lwd~~~----~~~~~~~~~~~~~~~~~~s~-~~~~~~~ 434 (528)
+|...|.+++|+| ++ . +|++++.|+.|++||+++ +.++..+.+...+..+.|++ ++
T Consensus 202 ~h~~~v~~~~~~~-------~~------~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~----- 263 (383)
T 3ei3_B 202 LHKAKVTHAEFNP-------RC------DWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDS----- 263 (383)
T ss_dssp CSSSCEEEEEECS-------SC------TTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTS-----
T ss_pred cCCCcEEEEEECC-------CC------CCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCC-----
Confidence 9999999999999 87 4 899999999999999998 77777777767788888988 66
Q ss_pred CceeeeecCCCCceeeecCCCCceEEeecCC-----------------CCeEEEEEeCCe-EEEEECCCeEEEEeCCCCc
Q 009715 435 DNVCPVGTLQPAPSMRDVPKLSPLVAHRVHT-----------------EPLSGLIFTQES-VLTVCREGHIKIWMRPGVA 496 (528)
Q Consensus 435 d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~-----------------~~V~~l~~s~d~-l~t~s~Dg~i~iW~~~~~~ 496 (528)
..+..++.++.+++||++..+.+..+.+|. ..+..++|+|++ + +++.|+.|++||+..+.
T Consensus 264 -~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 264 -TKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp -CEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCC
T ss_pred -CEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCc
Confidence 567788889999999999888777777653 234446666654 4 77899999999998766
Q ss_pred cccC--C--Cccce--EEEccCCceEEEeeeeccc
Q 009715 497 ESQS--S--SSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 497 ~~~~--~--~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
.... . +...+ ++|+||+++|++++ +|.+
T Consensus 342 ~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i 375 (383)
T 3ei3_B 342 LVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNI 375 (383)
T ss_dssp EEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEE
T ss_pred eeeeecCCCCCceEEEEEEecCccEEEEec-CCcE
Confidence 3222 2 33334 69999999999996 5543
No 78
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.1e-32 Score=268.55 Aligned_cols=294 Identities=13% Similarity=0.183 Sum_probs=204.1
Q ss_pred CCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEee--CCCcEEEEEeCCceEEEEEcCCC
Q 009715 166 KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVP--GGDGAFVVGHADGNLYVYEKSKD 243 (528)
Q Consensus 166 ~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p--~g~~~l~tg~~dg~v~vwd~~~~ 243 (528)
++++.|++|+.||.|++||+..... . .........|...|++++|+| ++. +|++++.||.|++||+...
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~----~----~~~~~~~~~~~~~v~~~~~~~~~d~~-~l~s~~~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 21 FYGRHVATCSSDQHIKVFKLDKDTS----N----WELSDSWRAHDSSIVAIDWASPEYGR-IIASASYDKTVKLWEEDPD 91 (351)
T ss_dssp SSSSEEEEEETTSEEEEEEECSSSC----C----EEEEEEEECCSSCEEEEEECCGGGCS-EEEEEETTSCEEEEEECTT
T ss_pred CCCCEEEEeeCCCeEEEEECCCCCC----c----ceecceeccCCCcEEEEEEcCCCCCC-EEEEEcCCCeEEEEecCCC
Confidence 3556778888999999999875210 0 011111223899999999999 577 9999999999999999863
Q ss_pred CCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC--CCEEEEEeCCCcEEEEecCCceEEeeec---
Q 009715 244 GAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD--GTYLATVGRDGYLRVFDYSKEQLICGGK--- 318 (528)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd--g~~l~s~~~dg~i~vwd~~~~~~~~~~~--- 318 (528)
..... ......+..+..|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+.
T Consensus 92 ~~~~~-----------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 154 (351)
T 3f3f_A 92 QEECS-----------------GRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTS 154 (351)
T ss_dssp SCTTS-----------------SCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEE
T ss_pred ccccc-----------------ccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccc
Confidence 22100 0011346677789999999999999 9999999999999999998776443322
Q ss_pred ----------ccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCeE--EEEeecCCCCeEEEEEecCCCCCCCCCC
Q 009715 319 ----------SYYGALLCCAWSMD---GKYILTGGEDDLVQVWSMEDRKV--VAWGEGHNSWVSGVAFDSYWSQPNSDGT 383 (528)
Q Consensus 319 ----------~~~~~v~~l~~sp~---g~~l~sg~~dg~v~vwd~~~~~~--~~~~~~h~~~V~~v~f~p~~~~~~~dg~ 383 (528)
.|...+.+++|+|+ +.++++++.|+.+.+|+...++. +..+.+|...|++++|+| ++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p-------~~~ 227 (351)
T 3f3f_A 155 EMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP-------SIG 227 (351)
T ss_dssp EEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC-------CSS
T ss_pred cccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC-------CCC
Confidence 57788999999997 89999999999998888887764 777889999999999999 751
Q ss_pred ccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCC-CCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEee
Q 009715 384 AETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGP-LGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHR 462 (528)
Q Consensus 384 ~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~ 462 (528)
. ...+|++++.|+.|++||++.+.......... ............ ........+.......+|+....+++..+.
T Consensus 228 ~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (351)
T 3f3f_A 228 R--WYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVD--MDAQGRSDSNTEEKAELQSNLQVELLSEHD 303 (351)
T ss_dssp C--SSEEEEEEETTSCEEEEEEEECC-----------------------------------------CCSEEEEEEEEEC
T ss_pred C--cceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccc--cccccccccccceeeeecccccccEEEEEe
Confidence 0 01489999999999999999875543332211 001111111100 000000122233344555555667888889
Q ss_pred cCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCc
Q 009715 463 VHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVA 496 (528)
Q Consensus 463 ~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~ 496 (528)
+|...|++++|+|++ |++++.||.|++|++..+.
T Consensus 304 ~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 304 DHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp TTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred cccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 999999999999974 9999999999999998754
No 79
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=9.5e-32 Score=269.15 Aligned_cols=291 Identities=12% Similarity=0.107 Sum_probs=208.6
Q ss_pred CCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCc----------EEEEeCCCCCCC----CCCCCeEEEEe-
Q 009715 111 GSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDA----------IFISDLNSQDKD----AKDGHDLLIGL- 175 (528)
Q Consensus 111 ~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~----------i~v~~~~~~~~~----~~~~~~l~~g~- 175 (528)
.|.||+|+| ++.++++++.+.... .-+.++.+|+.... .....+...+.. +++++.+++|.
T Consensus 16 PV~sv~fs~-dg~~l~sGGg~~~~s---Gi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~ 91 (365)
T 4h5i_A 16 PAYGAKFLN-NDTLLVAGGGGEGNN---GIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCN 91 (365)
T ss_dssp CEEEEEEEE-TTEEEEEEECCSSSS---SCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECC
T ss_pred CEEEEEEeC-CCcEEEEECCCcccc---CCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEEC
Confidence 589999998 777777776421100 11334666654321 111233332211 56777777765
Q ss_pred ----------cCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEE--eCCceEEEEEcCCC
Q 009715 176 ----------NSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVG--HADGNLYVYEKSKD 243 (528)
Q Consensus 176 ----------~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg--~~dg~v~vwd~~~~ 243 (528)
.|+.+++|++...... ........+. ....+...+.+++|+|||+ +++++ +.|++|+|||+.+.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~v~fSpDg~-~la~as~~~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQ--LEFLTSVDFD-ASTNADDYTKLVYISREGT-VAAIASSKVPAIMRIIDPSDL 167 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTE--EEEEEEECSS-CCCCTTCCEEEEEECTTSS-CEEEEESCSSCEEEEEETTTT
T ss_pred CCccEEEEecCCCcEEEEEecCCCce--EEEeeeecee-ecCCcccCEEEEEEcCCCC-EEEEEECCCCCEEEEeECCCC
Confidence 4667999998652111 0111111111 1122556789999999999 66544 47899999998752
Q ss_pred CCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEe--eecccC
Q 009715 244 GAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLIC--GGKSYY 321 (528)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~--~~~~~~ 321 (528)
..+..+ .|.+.|.+++|+|||++|++++.+ .+++|+..+++.+. ....|.
T Consensus 168 --------------------------~~~~~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~ 219 (365)
T 4h5i_A 168 --------------------------TEKFEI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKN 219 (365)
T ss_dssp --------------------------EEEEEE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTT
T ss_pred --------------------------cEEEEe-CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCC
Confidence 223333 366889999999999999999865 56667766666543 345678
Q ss_pred CCeEEEEEcCCCCEEEEEeCCC----cEEEEECCCCeE----EEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEE
Q 009715 322 GALLCCAWSMDGKYILTGGEDD----LVQVWSMEDRKV----VAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGS 393 (528)
Q Consensus 322 ~~v~~l~~sp~g~~l~sg~~dg----~v~vwd~~~~~~----~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s 393 (528)
..|.+++|+|+++++++++.|+ .+++|++..... ...+.+|...|++++|+| || .+|++
T Consensus 220 ~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-------dg------~~las 286 (365)
T 4h5i_A 220 WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-------KG------ELAVL 286 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-------TS------CEEEE
T ss_pred CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC-------CC------CceEE
Confidence 8899999999999999998887 688899877543 355678999999999999 99 79999
Q ss_pred EeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEE
Q 009715 394 VGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIF 473 (528)
Q Consensus 394 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~ 473 (528)
|+.|++|+|||+++++++..+. .+|...|++|+|
T Consensus 287 gs~D~~V~iwd~~~~~~~~~~~----------------------------------------------~gH~~~V~~v~f 320 (365)
T 4h5i_A 287 ASNDNSIALVKLKDLSMSKIFK----------------------------------------------QAHSFAITEVTI 320 (365)
T ss_dssp EETTSCEEEEETTTTEEEEEET----------------------------------------------TSSSSCEEEEEE
T ss_pred EcCCCEEEEEECCCCcEEEEec----------------------------------------------CcccCCEEEEEE
Confidence 9999999999999988765542 369999999999
Q ss_pred eCCe--EEEEECCCeEEEEeCCCCc
Q 009715 474 TQES--VLTVCREGHIKIWMRPGVA 496 (528)
Q Consensus 474 s~d~--l~t~s~Dg~i~iW~~~~~~ 496 (528)
+||+ |+|+|.|++||||+++...
T Consensus 321 Spdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 321 SPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp CTTSCEEEEEETTSEEEEEECCTTT
T ss_pred CCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 9985 9999999999999998654
No 80
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-31 Score=265.09 Aligned_cols=270 Identities=15% Similarity=0.110 Sum_probs=233.8
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|...|++++|+|+++ +|++++.||.|++||+.. ...+..+..|...|.+++|
T Consensus 30 ~h~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~--------------------------~~~~~~~~~h~~~v~~~~~ 82 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGD-LLFSCSKDSSASVWYSLN--------------------------GERLGTLDGHTGTIWSIDV 82 (369)
T ss_dssp CCSSCEEEEEECTTSC-EEEEEESSSCEEEEETTT--------------------------CCEEEEECCCSSCEEEEEE
T ss_pred EeeceEEEEEEcCCCC-EEEEEeCCCEEEEEeCCC--------------------------chhhhhhhhcCCcEEEEEE
Confidence 4999999999999999 999999999999999875 2456677889999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCe--------
Q 009715 288 STDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGED-----DLVQVWSMEDRK-------- 354 (528)
Q Consensus 288 spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~d-----g~v~vwd~~~~~-------- 354 (528)
+|++++|++++.|+.|++||+.+++.+..+. +...+.+++|+|++++|++++.+ +.|++||++...
T Consensus 83 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~ 161 (369)
T 3zwl_B 83 DCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKV 161 (369)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccc
Confidence 9999999999999999999999999988887 88999999999999999999999 999999987653
Q ss_pred ---EEEEeecCCC--CeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC-CeEEEEeec-CCCCCCCeecC
Q 009715 355 ---VVAWGEGHNS--WVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM-DEIVVPLRR-GPLGGSPTFST 427 (528)
Q Consensus 355 ---~~~~~~~h~~--~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~-~~~~~~~~~s~ 427 (528)
.+..+..|.. .+.+++|+| ++ .+|++++.|+.|++||+++ .+.+..+.. ...+..+.|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 228 (369)
T 3zwl_B 162 SEEPIHKIITHEGLDAATVAGWST-------KG------KYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSP 228 (369)
T ss_dssp CSSCSEEEECCTTCCCEEEEEECG-------GG------CEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECT
T ss_pred ccceeeeccCCcCccceeEEEEcC-------CC------CEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECC
Confidence 3444556666 999999999 88 6899999999999999998 777777764 34567788887
Q ss_pred CCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEECCC--------------eEEEEe
Q 009715 428 GSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCREG--------------HIKIWM 491 (528)
Q Consensus 428 ~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg--------------~i~iW~ 491 (528)
++ ..+.+++.++.+.+||+...+.+..+. +...+..++|+|++ +++++.++ .|++||
T Consensus 229 ~~------~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d 301 (369)
T 3zwl_B 229 DL------TYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYH 301 (369)
T ss_dssp TS------SEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEE
T ss_pred CC------CEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEe
Confidence 76 566788889999999999998888887 78899999999974 88888888 899999
Q ss_pred CCCCccc--cCCCccce--EEEccCCceEEEeeeeccc
Q 009715 492 RPGVAES--QSSSSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 492 ~~~~~~~--~~~~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
+...... ...|...| ++|+||+++|++++.+|.+
T Consensus 302 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v 339 (369)
T 3zwl_B 302 KIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFI 339 (369)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred cCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeE
Confidence 9877643 33577777 8899999999999888765
No 81
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.6e-32 Score=274.63 Aligned_cols=275 Identities=11% Similarity=0.101 Sum_probs=232.1
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|...|++++|+| + +|++|+.||.|++|++...... . ....+..+..|...|.+++|
T Consensus 14 ~h~~~i~~~~~~~--~-~l~s~~~dg~i~iw~~~~~~~~-~-------------------~~~~~~~~~~h~~~v~~~~~ 70 (397)
T 1sq9_A 14 AHDADIFSVSACN--S-FTVSCSGDGYLKVWDNKLLDNE-N-------------------PKDKSYSHFVHKSGLHHVDV 70 (397)
T ss_dssp CSSSCEEEEEECS--S-EEEEEETTSEEEEEESBCCTTC-C-------------------GGGGEEEEECCTTCEEEEEE
T ss_pred hhhcCeEEEEecC--C-eEEEEcCCCEEEEEECCCcccc-c-------------------CCCcceEEecCCCcEEEEEE
Confidence 4999999999999 4 8999999999999999863211 0 01256677889999999999
Q ss_pred CCC----C---CEEEEEeCCCcEEEEecCCceE-----Eeeeccc-----CCCeEEEEEc----CCCCE-EEEEeCCCcE
Q 009715 288 STD----G---TYLATVGRDGYLRVFDYSKEQL-----ICGGKSY-----YGALLCCAWS----MDGKY-ILTGGEDDLV 345 (528)
Q Consensus 288 spd----g---~~l~s~~~dg~i~vwd~~~~~~-----~~~~~~~-----~~~v~~l~~s----p~g~~-l~sg~~dg~v 345 (528)
+|+ + ++|++++.|+.|++||+.+++. +..+..| ...|.+++|+ |++++ |++++.|+.|
T Consensus 71 ~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i 150 (397)
T 1sq9_A 71 LQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTT 150 (397)
T ss_dssp EEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCE
T ss_pred ecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcE
Confidence 999 9 9999999999999999988775 7777878 5899999999 99999 9999999999
Q ss_pred EEEECCC------CeEEE-----Ee-------ecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC
Q 009715 346 QVWSMED------RKVVA-----WG-------EGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 346 ~vwd~~~------~~~~~-----~~-------~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~ 407 (528)
++||+++ ++.+. .+ ..|...|.+++|+| ++ +|++++.|+.|++||+++
T Consensus 151 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~-------~l~~~~~dg~i~i~d~~~ 216 (397)
T 1sq9_A 151 YIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-------RG-------LIATGFNNGTVQISELST 216 (397)
T ss_dssp EEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-------TS-------EEEEECTTSEEEEEETTT
T ss_pred EEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECC-------Cc-------eEEEEeCCCcEEEEECCC
Confidence 9999998 66655 66 34899999999999 76 799999999999999999
Q ss_pred CeEEEEeec-------CCCCCCCeecCCCCCccCCceeeeecCC---CCceeeecCCCCceEEeec-------------C
Q 009715 408 DEIVVPLRR-------GPLGGSPTFSTGSQSAHWDNVCPVGTLQ---PAPSMRDVPKLSPLVAHRV-------------H 464 (528)
Q Consensus 408 ~~~~~~~~~-------~~~~~~~~~s~~~~~~~~d~~~~~g~~~---~~~~~~d~~~~~~~~~~~~-------------h 464 (528)
++.+..+.. ...+..+.|++++ ..+.+++.+ +.+++||++..+++..+.. |
T Consensus 217 ~~~~~~~~~~~~h~~~~~~i~~i~~~~~~------~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (397)
T 1sq9_A 217 LRPLYNFESQHSMINNSNSIRSVKFSPQG------SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH 290 (397)
T ss_dssp TEEEEEEECCC---CCCCCEEEEEECSST------TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSB
T ss_pred CceeEEEeccccccccCCccceEEECCCC------CEEEEEecCCCCceEEEEECCCCcccceeccCccccccccccccc
Confidence 999988876 5567778888875 566778888 8999999999999999998 9
Q ss_pred CCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCccc--cC------CC---------------ccce--EEEccCC----
Q 009715 465 TEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAES--QS------SS---------------SETV--LSTSSKD---- 513 (528)
Q Consensus 465 ~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~--~~------~~---------------~~~v--l~~spd~---- 513 (528)
...|.+++|+|++ |++++.||.|++||+...... .. .| ...| ++|+||+
T Consensus 291 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~ 370 (397)
T 1sq9_A 291 SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSG 370 (397)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBS
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccc
Confidence 9999999999974 999999999999999876522 22 34 6667 8889999
Q ss_pred ------ceEEEeeeeccc
Q 009715 514 ------KPLLSSKVVTSS 525 (528)
Q Consensus 514 ------~~l~s~~~~gs~ 525 (528)
++|++++.+|.+
T Consensus 371 ~~~~~~~~l~s~~~dg~i 388 (397)
T 1sq9_A 371 MGADLNESLCCVCLDRSI 388 (397)
T ss_dssp TTCTTSCEEEEEETTTEE
T ss_pred ccccccceEEEecCCCcE
Confidence 799999888765
No 82
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.4e-31 Score=291.95 Aligned_cols=274 Identities=14% Similarity=0.148 Sum_probs=235.9
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
+|++..|++|+.+|.|++||+.+.. .. .....|..+|++++|+|+++ +|++++.||.|++||+.+
T Consensus 22 sp~~~~la~~~~~g~v~iwd~~~~~-----~~-------~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~-- 86 (814)
T 3mkq_A 22 HPTEPWVLTTLYSGRVEIWNYETQV-----EV-------RSIQVTETPVRAGKFIARKN-WIIVGSDDFRIRVFNYNT-- 86 (814)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTTE-----EE-------EEEECCSSCEEEEEEEGGGT-EEEEEETTSEEEEEETTT--
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCc-----eE-------EEEecCCCcEEEEEEeCCCC-EEEEEeCCCeEEEEECCC--
Confidence 5899999999999999999987621 11 11123889999999999999 999999999999999875
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCc-eEEeeecccCCC
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKE-QLICGGKSYYGA 323 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~ 323 (528)
...+..+..|.+.|.+++|+|++++|++++.||.|++||+.++ .....+..|...
T Consensus 87 ------------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~ 142 (814)
T 3mkq_A 87 ------------------------GEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF 142 (814)
T ss_dssp ------------------------CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSC
T ss_pred ------------------------CcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCc
Confidence 2456677889999999999999999999999999999999987 777788889999
Q ss_pred eEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEeecCC-CCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEE
Q 009715 324 LLCCAWSM-DGKYILTGGEDDLVQVWSMEDRKVVAWGEGHN-SWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLL 401 (528)
Q Consensus 324 v~~l~~sp-~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~-~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~ 401 (528)
|.+++|+| ++.+|++++.|+.|++||+++++....+..|. ..|.+++|+|. +++ .+|++++.|+.|+
T Consensus 143 v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~------~~l~~~~~dg~i~ 211 (814)
T 3mkq_A 143 VMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL-----PDK------PYMITASDDLTIK 211 (814)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCS-----TTC------CEEEEECTTSEEE
T ss_pred EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEEC-----CCC------CEEEEEeCCCEEE
Confidence 99999999 88999999999999999999888777776554 89999999871 144 5899999999999
Q ss_pred EEEccCCeEEEEeecC-CCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe---
Q 009715 402 LWDLEMDEIVVPLRRG-PLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--- 477 (528)
Q Consensus 402 lwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--- 477 (528)
+||+.+++.+..+..+ ..+..+.|++++ ..+.+++.++.+++||..+.+.+..+..|...|.+++|+|++
T Consensus 212 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~------~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 212 IWDYQTKSCVATLEGHMSNVSFAVFHPTL------PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECSSS------SEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGG
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCC------CEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCce
Confidence 9999999998888743 456677888876 467888889999999999999999999999999999999985
Q ss_pred EEEEECCCeEEEEeCCC
Q 009715 478 VLTVCREGHIKIWMRPG 494 (528)
Q Consensus 478 l~t~s~Dg~i~iW~~~~ 494 (528)
+++++.|+.+.+|++..
T Consensus 286 ~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 286 YIASGFDNGFTVLSLGN 302 (814)
T ss_dssp EEEEEETTEEEEEECSC
T ss_pred EEEEEeCCCEEEEEcCC
Confidence 57777788899998754
No 83
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=7.2e-32 Score=273.57 Aligned_cols=278 Identities=17% Similarity=0.191 Sum_probs=223.4
Q ss_pred EEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEee-CCCcEEEEEeCCceEEEEEcCCCCCCCCccc
Q 009715 173 IGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVP-GGDGAFVVGHADGNLYVYEKSKDGAGDSSFP 251 (528)
Q Consensus 173 ~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p-~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~ 251 (528)
.++.+|.|++|++...... .........|...|++++|+| ++. +|++|+.||.|+||++...+...
T Consensus 52 ~~~~~g~i~v~~~~~~~~~--------~~~~~~~~~h~~~V~~~~~~p~~~~-~l~s~s~dg~v~vw~~~~~~~~~---- 118 (402)
T 2aq5_A 52 EASGGGAFLVLPLGKTGRV--------DKNVPLVCGHTAPVLDIAWCPHNDN-VIASGSEDCTVMVWEIPDGGLVL---- 118 (402)
T ss_dssp CCSSSCCEEEEETTCCEEC--------CTTCCCBCCCSSCEEEEEECTTCTT-EEEEEETTSEEEEEECCTTCCSS----
T ss_pred EEcCCCEEEEEECccCCCC--------CCCCceEecCCCCEEEEEeCCCCCC-EEEEEeCCCeEEEEEccCCCCcc----
Confidence 4678999999998652110 001111234999999999999 777 99999999999999998632111
Q ss_pred cccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC-CEEEEEeCCCcEEEEecCCceEEeee--cccCCCeEEEE
Q 009715 252 VIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG-TYLATVGRDGYLRVFDYSKEQLICGG--KSYYGALLCCA 328 (528)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg-~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~~v~~l~ 328 (528)
....++..+.+|...|.+++|+|++ .+|++++.|+.|++||+.+++.+..+ ..|...|.+++
T Consensus 119 ---------------~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 183 (402)
T 2aq5_A 119 ---------------PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVD 183 (402)
T ss_dssp ---------------CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEE
T ss_pred ---------------ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEE
Confidence 0125677888999999999999998 69999999999999999999999888 78999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCCeEEEEe-ecCCCC-eEEEEEecCCCCCCCCCCccceeEEEEEE---eCCCeEEEE
Q 009715 329 WSMDGKYILTGGEDDLVQVWSMEDRKVVAWG-EGHNSW-VSGVAFDSYWSQPNSDGTAETVMYRFGSV---GQDTRLLLW 403 (528)
Q Consensus 329 ~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~-~~h~~~-V~~v~f~p~~~~~~~dg~~~~~~~~l~s~---s~D~~i~lw 403 (528)
|+|++++|++++.|+.|++||+++++.+..+ .+|... +.+++|+| +| .+|+++ +.|+.|++|
T Consensus 184 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~------~~l~~g~~~~~d~~i~iw 250 (402)
T 2aq5_A 184 WSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS-------EG------KILTTGFSRMSERQVALW 250 (402)
T ss_dssp ECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS-------TT------EEEEEEECTTCCEEEEEE
T ss_pred ECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC-------CC------cEEEEeccCCCCceEEEE
Confidence 9999999999999999999999999999888 688876 89999999 98 788888 799999999
Q ss_pred EccCCeE---EEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCc-eEEeec--CCCCeEEEEEeCCe
Q 009715 404 DLEMDEI---VVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSP-LVAHRV--HTEPLSGLIFTQES 477 (528)
Q Consensus 404 d~~~~~~---~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~-~~~~~~--h~~~V~~l~~s~d~ 477 (528)
|+++.+. ...+.+...+..+.|++++. ..+..+..++.+++||+...++ +..+.. |...|.+++|+|++
T Consensus 251 d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-----~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~ 325 (402)
T 2aq5_A 251 DTKHLEEPLSLQELDTSSGVLLPFFDPDTN-----IVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKR 325 (402)
T ss_dssp ETTBCSSCSEEEECCCCSSCEEEEEETTTT-----EEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGG
T ss_pred cCccccCCceEEeccCCCceeEEEEcCCCC-----EEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccc
Confidence 9998664 23333444566677777762 2234677899999999998875 555544 55899999999997
Q ss_pred EEEEECCCeEEEEeCCCCc
Q 009715 478 VLTVCREGHIKIWMRPGVA 496 (528)
Q Consensus 478 l~t~s~Dg~i~iW~~~~~~ 496 (528)
.+.++.|+.+++|++..+.
T Consensus 326 ~~~~s~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 326 GLEVNKCEIARFYKLHERK 344 (402)
T ss_dssp GSCGGGTEEEEEEEEETTE
T ss_pred ccceecceeEEEEEcCCCc
Confidence 4445678899999987653
No 84
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.6e-32 Score=278.30 Aligned_cols=279 Identities=11% Similarity=0.138 Sum_probs=219.1
Q ss_pred cCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecC---------
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQ--------- 279 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--------- 279 (528)
+.+.|++++|+|+|. +|++|+.||.|+||++........ ........+..+++|.
T Consensus 27 ~~~~V~~v~~s~~g~-~la~g~~dg~v~iw~~~~~~~~~~---------------~~~~~~~~~~~~~~h~~~~~~~~~~ 90 (447)
T 3dw8_B 27 EADIISTVEFNHSGE-LLATGDKGGRVVIFQQEQENKIQS---------------HSRGEYNVYSTFQSHEPEFDYLKSL 90 (447)
T ss_dssp GGGSEEEEEECSSSS-EEEEEETTSEEEEEEECC-----C---------------CCCCCEEEEEEEECCCCEEEGGGTE
T ss_pred ccCcEEEEEECCCCC-EEEEEcCCCeEEEEEecCCCCCCc---------------ccccceeEecccccccccccccccc
Confidence 788999999999999 999999999999999986321100 0001122466778887
Q ss_pred ---CCeEEEEECCCC--CEEEEEeCCCcEEEEecCCceEE---------------------------------------e
Q 009715 280 ---GSINSIAFSTDG--TYLATVGRDGYLRVFDYSKEQLI---------------------------------------C 315 (528)
Q Consensus 280 ---~~v~~l~~spdg--~~l~s~~~dg~i~vwd~~~~~~~---------------------------------------~ 315 (528)
..|.+++|+|++ .+|++++.|+.|++||+.+++.. .
T Consensus 91 ~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
T 3dw8_B 91 EIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRR 170 (447)
T ss_dssp EECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEE
T ss_pred cccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceE
Confidence 889999999998 79999999999999999865442 1
Q ss_pred e-ecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-CeEEE-------EeecCCCCeEEEEEecCCCCCCCCCCccc
Q 009715 316 G-GKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMED-RKVVA-------WGEGHNSWVSGVAFDSYWSQPNSDGTAET 386 (528)
Q Consensus 316 ~-~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~-~~~~~-------~~~~h~~~V~~v~f~p~~~~~~~dg~~~~ 386 (528)
. ..+|...|.+++|+|++++|++| .|+.|++||++. ++.+. .+.+|...|.+++|+| ++.
T Consensus 171 ~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-------~~~--- 239 (447)
T 3dw8_B 171 IFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-------NSC--- 239 (447)
T ss_dssp EECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-------SCT---
T ss_pred EeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-------CCC---
Confidence 2 35799999999999999999998 799999999994 44444 3568999999999999 751
Q ss_pred eeEEEEEEeCCCeEEEEEccCCeE----EEEeecCC-------------CCCCCeecCCCCCccCCceeeeecCCCCcee
Q 009715 387 VMYRFGSVGQDTRLLLWDLEMDEI----VVPLRRGP-------------LGGSPTFSTGSQSAHWDNVCPVGTLQPAPSM 449 (528)
Q Consensus 387 ~~~~l~s~s~D~~i~lwd~~~~~~----~~~~~~~~-------------~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~ 449 (528)
.+|++++.|+.|++||+++++. +..+.... .+..+.|++++ ..+..++. +.+++
T Consensus 240 --~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g------~~l~~~~~-~~v~i 310 (447)
T 3dw8_B 240 --NTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG------RYMMTRDY-LSVKV 310 (447)
T ss_dssp --TEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTS------SEEEEEES-SEEEE
T ss_pred --cEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCC------CEEEEeeC-CeEEE
Confidence 3899999999999999999886 56665543 56677888876 45666777 99999
Q ss_pred eecCC-CCceEEeecCCCC---------------eEEEEEeCCe--EEEEECCCeEEEEeCCCCcccc------------
Q 009715 450 RDVPK-LSPLVAHRVHTEP---------------LSGLIFTQES--VLTVCREGHIKIWMRPGVAESQ------------ 499 (528)
Q Consensus 450 ~d~~~-~~~~~~~~~h~~~---------------V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~~------------ 499 (528)
||++. .+++..+.+|... +..++|+|++ |++++.||.|++||+.++....
T Consensus 311 wd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 390 (447)
T 3dw8_B 311 WDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRT 390 (447)
T ss_dssp EETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTC
T ss_pred EeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeeccccccccc
Confidence 99997 8888888888642 3349999974 9999999999999998765321
Q ss_pred ----------------------CCCccce--EEEccCCceEEEeeeec
Q 009715 500 ----------------------SSSSETV--LSTSSKDKPLLSSKVVT 523 (528)
Q Consensus 500 ----------------------~~~~~~v--l~~spd~~~l~s~~~~g 523 (528)
..+...| ++|+|++++||++..++
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 391 VLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN 438 (447)
T ss_dssp BCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC
T ss_pred ccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce
Confidence 0222334 89999999999887664
No 85
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-31 Score=256.19 Aligned_cols=264 Identities=12% Similarity=0.153 Sum_probs=222.0
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|...|++++| |++. +|++++.||.|++||+.. ......+..|...|.+++|
T Consensus 16 ~h~~~v~~~~~-~~~~-~l~s~~~dg~v~vw~~~~--------------------------~~~~~~~~~~~~~v~~~~~ 67 (313)
T 3odt_A 16 GHDQDVRDVVA-VDDS-KVASVSRDGTVRLWSKDD--------------------------QWLGTVVYTGQGFLNSVCY 67 (313)
T ss_dssp CCSSCEEEEEE-EETT-EEEEEETTSEEEEEEESS--------------------------SEEEEEEEECSSCEEEEEE
T ss_pred CCCCCcEEEEe-cCCC-EEEEEEcCCcEEEEECCC--------------------------CEEEEEeecCCccEEEEEE
Confidence 49999999999 9998 899999999999999864 2345667788899999999
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCc---eEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCC
Q 009715 288 STDGTYLATVGRDGYLRVFDYSKE---QLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNS 364 (528)
Q Consensus 288 spdg~~l~s~~~dg~i~vwd~~~~---~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~ 364 (528)
+|++++|++++.|+.|++|++... +.+..+..|...|.+++| +++++++++.|+.|++|| .++.+..+..|..
T Consensus 68 ~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~ 143 (313)
T 3odt_A 68 DSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNA 143 (313)
T ss_dssp ETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSS
T ss_pred CCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCC
Confidence 999999999999999999998654 567778889999999999 577999999999999999 6778888899999
Q ss_pred CeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEee--cCCCCCCCeecCCCCCccCCceeeeec
Q 009715 365 WVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLR--RGPLGGSPTFSTGSQSAHWDNVCPVGT 442 (528)
Q Consensus 365 ~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~--~~~~~~~~~~s~~~~~~~~d~~~~~g~ 442 (528)
.|.+++|.|. ++ .++++++.|+.|++|| ..+....+. +...+..+.+++++ .+..+.
T Consensus 144 ~v~~~~~~~~------~~------~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~ 202 (313)
T 3odt_A 144 SVWDAKVVSF------SE------NKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDG-------HFISCS 202 (313)
T ss_dssp CEEEEEEEET------TT------TEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETT-------EEEEEE
T ss_pred ceeEEEEccC------CC------CEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCC-------eEEEcc
Confidence 9999999872 45 5899999999999999 445555554 33456667777765 267888
Q ss_pred CCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe-EEEEECCCeEEEEeCCCCccc--cCCCccce--EEEccCCceEE
Q 009715 443 LQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES-VLTVCREGHIKIWMRPGVAES--QSSSSETV--LSTSSKDKPLL 517 (528)
Q Consensus 443 ~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-l~t~s~Dg~i~iW~~~~~~~~--~~~~~~~v--l~~spd~~~l~ 517 (528)
.++.+++||++..+++..+.+|...|.+++|+|++ |++++.||.|++||+..+... ...+...+ ++++||+++ +
T Consensus 203 ~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~ 281 (313)
T 3odt_A 203 NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDI-I 281 (313)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCE-E
T ss_pred CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCE-E
Confidence 99999999999999999999999999999999984 999999999999999877633 23556566 888999995 4
Q ss_pred Eeeeeccc
Q 009715 518 SSKVVTSS 525 (528)
Q Consensus 518 s~~~~gs~ 525 (528)
+++.+|.+
T Consensus 282 ~~~~dg~i 289 (313)
T 3odt_A 282 VGSSDNLV 289 (313)
T ss_dssp EEETTSCE
T ss_pred EEeCCCcE
Confidence 56666544
No 86
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.2e-30 Score=251.79 Aligned_cols=272 Identities=16% Similarity=0.253 Sum_probs=220.1
Q ss_pred CeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCC
Q 009715 169 HDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDS 248 (528)
Q Consensus 169 ~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~ 248 (528)
+.|++| .|++|++||+.+. +.. ... ....|...|++++|+|+++ +|++|+.||+|++|++.+
T Consensus 37 ~~lAvg-~D~tV~iWd~~tg-----~~~-~~~----~~~~~~~~V~~v~~~~~~~-~l~sgs~Dg~v~iw~~~~------ 98 (318)
T 4ggc_A 37 NVLAVA-LDNSVYLWSASSG-----DIL-QLL----QMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQ------ 98 (318)
T ss_dssp SEEEEE-ETTEEEEEETTTC-----CEE-EEE----ECCSTTCCEEEEEECTTSS-EEEEEETTSEEEEEETTT------
T ss_pred CEEEEE-eCCEEEEEECCCC-----CEE-EEE----EecCCCCeEEEEEECCCCC-EEEEEECCCcEEEeecCC------
Confidence 466666 4899999999862 111 111 1223888999999999999 999999999999999975
Q ss_pred ccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCc-eEEeeecccCCCeEEE
Q 009715 249 SFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKE-QLICGGKSYYGALLCC 327 (528)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~l 327 (528)
.+.+..+.+|...+.++.+ ++..+++++.++.+++|+.... ..+..+.+|...+..+
T Consensus 99 --------------------~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (318)
T 4ggc_A 99 --------------------QKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGL 156 (318)
T ss_dssp --------------------TEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEE
T ss_pred --------------------ceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEE
Confidence 2356677888888887666 5679999999999999998865 4566778899999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCeE----EEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEE
Q 009715 328 AWSMDGKYILTGGEDDLVQVWSMEDRKV----VAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLW 403 (528)
Q Consensus 328 ~~sp~g~~l~sg~~dg~v~vwd~~~~~~----~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lw 403 (528)
.+++++++|++++.|+.|++||+++++. ......|...|.++++.| ++. ....+++++.++.|++|
T Consensus 157 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~---~~~~~~~~~~~~~i~lw 226 (318)
T 4ggc_A 157 RWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCP-------WQS---NVLATGGGTSDRHIRIW 226 (318)
T ss_dssp EECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECT-------TST---TEEEEEECTTTCEEEEE
T ss_pred EEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecC-------CCC---cEEEEEecCCCCEEEEE
Confidence 9999999999999999999999988653 344556889999999998 541 11345677889999999
Q ss_pred EccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEE
Q 009715 404 DLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTV 481 (528)
Q Consensus 404 d~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~ 481 (528)
|...............+..+.+.+.+.. ..+..+..++.+++||+++.+++..+.+|.+.|++|+|+||+ |+|+
T Consensus 227 d~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~ 302 (318)
T 4ggc_A 227 NVCSGACLSAVDAHSQVCSILWSPHYKE----LISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASA 302 (318)
T ss_dssp ETTTCCEEEEEECSSCEEEEEEETTTTE----EEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred ecccccccccccceeeeeeeeecccccc----eEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 9999998888777666667777666521 112345678999999999999999999999999999999985 9999
Q ss_pred ECCCeEEEEeCCC
Q 009715 482 CREGHIKIWMRPG 494 (528)
Q Consensus 482 s~Dg~i~iW~~~~ 494 (528)
|.||+|+|||+..
T Consensus 303 s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 303 AADETLRLWRCFE 315 (318)
T ss_dssp ETTTEEEEECCSC
T ss_pred ecCCeEEEEECCC
Confidence 9999999999864
No 87
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.6e-32 Score=275.75 Aligned_cols=269 Identities=14% Similarity=0.131 Sum_probs=211.0
Q ss_pred cCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEEC
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFS 288 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 288 (528)
|...|+||+|+|...++||+|+.||+|+|||+.... ...+..+.+|.+.|++|+|+
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~------------------------~~~~~~~~gH~~~V~~l~f~ 173 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD------------------------KPTFIKGIGAGGSITGLKFN 173 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS------------------------CCEEECCCSSSCCCCEEEEC
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC------------------------ceeEEEccCCCCCEEEEEEe
Confidence 788999999999665599999999999999987532 11233346789999999999
Q ss_pred C-CCCEEEEEeCCCcEEEEecCCceEEeeecc--cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCC
Q 009715 289 T-DGTYLATVGRDGYLRVFDYSKEQLICGGKS--YYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSW 365 (528)
Q Consensus 289 p-dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~ 365 (528)
| ++++|++++.||.|++||++++........ +...+.+++|+|++++|++|+.|+.|++||++ ++.+..+.+|...
T Consensus 174 p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~ 252 (435)
T 4e54_B 174 PLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKK 252 (435)
T ss_dssp SSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSC
T ss_pred CCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccce
Confidence 8 789999999999999999987655433332 34567899999999999999999999999986 4567788899999
Q ss_pred eEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEee----cCCCCCCCeecCCCCCccCCceeeee
Q 009715 366 VSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLR----RGPLGGSPTFSTGSQSAHWDNVCPVG 441 (528)
Q Consensus 366 V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~----~~~~~~~~~~s~~~~~~~~d~~~~~g 441 (528)
|.+++|+| +++ .+|++++.|+.|++||+++.+....+. +...+..++|++++ ..+..+
T Consensus 253 v~~v~~~p-------~~~-----~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg------~~l~s~ 314 (435)
T 4e54_B 253 VTHVALNP-------CCD-----WFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDG------ARLLTT 314 (435)
T ss_dssp EEEEEECT-------TCS-----SEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTS------SEEEEE
T ss_pred EEeeeecC-------CCc-----eEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCC------CeeEEE
Confidence 99999999 762 478999999999999999876544432 33456677888776 567889
Q ss_pred cCCCCceeeecCCCCceEEeecCCC------CeEEEEEeCCe--EEEEE------------CCCeEEEEeCCCCcccc--
Q 009715 442 TLQPAPSMRDVPKLSPLVAHRVHTE------PLSGLIFTQES--VLTVC------------REGHIKIWMRPGVAESQ-- 499 (528)
Q Consensus 442 ~~~~~~~~~d~~~~~~~~~~~~h~~------~V~~l~~s~d~--l~t~s------------~Dg~i~iW~~~~~~~~~-- 499 (528)
+.++.+++||+...+....+..|.. .+..+.|+|+. +++++ .++.|++||...+....
T Consensus 315 ~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l 394 (435)
T 4e54_B 315 DQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQL 394 (435)
T ss_dssp ESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEE
T ss_pred cCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEE
Confidence 9999999999999888877766653 23345666653 44443 34679999998876432
Q ss_pred -CCCccce---EEEccCCceEEEee
Q 009715 500 -SSSSETV---LSTSSKDKPLLSSK 520 (528)
Q Consensus 500 -~~~~~~v---l~~spd~~~l~s~~ 520 (528)
..|...| .+|+|||++|++|.
T Consensus 395 ~~~~~~~v~s~~~fspdg~~lasg~ 419 (435)
T 4e54_B 395 YDPESSGISSLNEFNPMGDTLASAM 419 (435)
T ss_dssp CCSSCCCCCCEEEECTTSSCEEEEC
T ss_pred eCCCCCcEEEEEEECCCCCEEEEEc
Confidence 2455555 47999999999886
No 88
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-31 Score=264.12 Aligned_cols=238 Identities=17% Similarity=0.315 Sum_probs=191.6
Q ss_pred CCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeC--CCcEEEEEeCCceEEEEEcCCC
Q 009715 166 KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPG--GDGAFVVGHADGNLYVYEKSKD 243 (528)
Q Consensus 166 ~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--g~~~l~tg~~dg~v~vwd~~~~ 243 (528)
+++++|++|+.||.|++||+.... .........|...|++++|+++ +. +|++++.||.|++||+...
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~ 89 (379)
T 3jrp_A 21 YYGKRLATCSSDKTIKIFEVEGET----------HKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWKEENG 89 (379)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTE----------EEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSCEEEEEEETT
T ss_pred CCCCEEEEEECCCcEEEEecCCCc----------ceeeeEecCCCCcEEEEEeCCCCCCC-EEEEeccCCEEEEEEcCCC
Confidence 356678888899999999987311 1111112238999999999977 77 9999999999999999752
Q ss_pred CCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC--CCEEEEEeCCCcEEEEecCCce--EEeeecc
Q 009715 244 GAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD--GTYLATVGRDGYLRVFDYSKEQ--LICGGKS 319 (528)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd--g~~l~s~~~dg~i~vwd~~~~~--~~~~~~~ 319 (528)
. ...+..+..|...|.+++|+|+ +.+|++++.|+.|++||+.++. ....+..
T Consensus 90 ~------------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 145 (379)
T 3jrp_A 90 R------------------------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA 145 (379)
T ss_dssp E------------------------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC
T ss_pred c------------------------eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC
Confidence 1 1245566678899999999998 9999999999999999998773 3445667
Q ss_pred cCCCeEEEEEcC-------------CCCEEEEEeCCCcEEEEECCCCe----EEEEeecCCCCeEEEEEecCCCCCCCC-
Q 009715 320 YYGALLCCAWSM-------------DGKYILTGGEDDLVQVWSMEDRK----VVAWGEGHNSWVSGVAFDSYWSQPNSD- 381 (528)
Q Consensus 320 ~~~~v~~l~~sp-------------~g~~l~sg~~dg~v~vwd~~~~~----~~~~~~~h~~~V~~v~f~p~~~~~~~d- 381 (528)
|...|.+++|+| ++.+|++++.|+.|++||++.++ ++..+.+|...|.+++|+| +
T Consensus 146 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp-------~~ 218 (379)
T 3jrp_A 146 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-------TV 218 (379)
T ss_dssp CTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-------CC
T ss_pred CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECC-------CC
Confidence 899999999999 69999999999999999998753 5567788999999999999 8
Q ss_pred --CCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceE
Q 009715 382 --GTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLV 459 (528)
Q Consensus 382 --g~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~ 459 (528)
+ .+|++++.|+.|++||++.+....... +.
T Consensus 219 ~~~------~~l~s~~~dg~i~iwd~~~~~~~~~~~------------------------------------------~~ 250 (379)
T 3jrp_A 219 LLR------SYLASVSQDRTCIIWTQDNEQGPWKKT------------------------------------------LL 250 (379)
T ss_dssp SSS------EEEEEEETTSCEEEEEESSTTSCCEEE------------------------------------------ES
T ss_pred CCC------CeEEEEeCCCEEEEEeCCCCCccceee------------------------------------------ee
Confidence 7 799999999999999998764211000 00
Q ss_pred EeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCC
Q 009715 460 AHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRP 493 (528)
Q Consensus 460 ~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~ 493 (528)
....|...|.+++|+|++ |++++.||.|++|++.
T Consensus 251 ~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 251 KEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp SSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred ccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 112478899999999985 9999999999999976
No 89
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.4e-31 Score=260.26 Aligned_cols=269 Identities=10% Similarity=0.077 Sum_probs=224.3
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|...|++++|+|+++ +|++++.||.|++|++..... .........|...|.+++|
T Consensus 9 ~h~~~v~~~~~s~~~~-~l~~~~~d~~v~iw~~~~~~~-----------------------~~~~~~~~~~~~~v~~~~~ 64 (342)
T 1yfq_A 9 APKDYISDIKIIPSKS-LLLITSWDGSLTVYKFDIQAK-----------------------NVDLLQSLRYKHPLLCCNF 64 (342)
T ss_dssp CCSSCEEEEEEEGGGT-EEEEEETTSEEEEEEEETTTT-----------------------EEEEEEEEECSSCEEEEEE
T ss_pred CCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEeCCCCc-----------------------cccceeeeecCCceEEEEE
Confidence 4999999999999999 999999999999999975210 1124445578899999999
Q ss_pred CCCCC-EEEEEeCCCcEEEEec-CCceEEeeecc--cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC---------Ce
Q 009715 288 STDGT-YLATVGRDGYLRVFDY-SKEQLICGGKS--YYGALLCCAWSMDGKYILTGGEDDLVQVWSMED---------RK 354 (528)
Q Consensus 288 spdg~-~l~s~~~dg~i~vwd~-~~~~~~~~~~~--~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~---------~~ 354 (528)
+|+++ +|++++.||.|++||+ .+++. ..+.. |...|.+++|+| +.+|++++.|+.|++||+++ ++
T Consensus 65 ~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 142 (342)
T 1yfq_A 65 IDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNL 142 (342)
T ss_dssp EESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEES
T ss_pred CCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCC
Confidence 99999 9999999999999999 87765 56677 999999999999 99999999999999999988 77
Q ss_pred EEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC-CeEE---EEeecCCCCCCCeecC-CC
Q 009715 355 VVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM-DEIV---VPLRRGPLGGSPTFST-GS 429 (528)
Q Consensus 355 ~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~-~~~~---~~~~~~~~~~~~~~s~-~~ 429 (528)
++..+. |...|.+++|+| + .+++++.|+.|++||+++ +... ....+...+..+.|++ ++
T Consensus 143 ~~~~~~-~~~~v~~~~~~~-------~--------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 206 (342)
T 1yfq_A 143 NSNNTK-VKNKIFTMDTNS-------S--------RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQ 206 (342)
T ss_dssp CSSSSS-SCCCEEEEEECS-------S--------EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGG
T ss_pred eeeEEe-eCCceEEEEecC-------C--------cEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCC
Confidence 777777 999999999998 4 389999999999999988 5432 2222334556677776 55
Q ss_pred CCccCCceeeeecCCCCceeeecCCC------CceEEeecCCC---------CeEEEEEeCCe--EEEEECCCeEEEEeC
Q 009715 430 QSAHWDNVCPVGTLQPAPSMRDVPKL------SPLVAHRVHTE---------PLSGLIFTQES--VLTVCREGHIKIWMR 492 (528)
Q Consensus 430 ~~~~~d~~~~~g~~~~~~~~~d~~~~------~~~~~~~~h~~---------~V~~l~~s~d~--l~t~s~Dg~i~iW~~ 492 (528)
..+.+++.++.+.+|++... +++..+..|.. .|.+++|+|++ |++++.||.|++||+
T Consensus 207 ------~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 207 ------EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp ------CEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred ------CEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcC
Confidence 56788888999999999876 78888888866 99999999974 999999999999999
Q ss_pred CCCccc--cCCC-ccceEEEccCCceEEEeeeecc
Q 009715 493 PGVAES--QSSS-SETVLSTSSKDKPLLSSKVVTS 524 (528)
Q Consensus 493 ~~~~~~--~~~~-~~~vl~~spd~~~l~s~~~~gs 524 (528)
..+... ...| ...|.++.||+++|++++.+|.
T Consensus 281 ~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 281 QTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDT 315 (342)
T ss_dssp TTTEEEEECCCCSSSEEEEEEECSSEEEEEEECTH
T ss_pred ccHhHhhhhhcccCCCceEecCCCCeEEEEecCCc
Confidence 876632 3355 7778555599999999998876
No 90
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.8e-31 Score=271.23 Aligned_cols=264 Identities=16% Similarity=0.211 Sum_probs=219.0
Q ss_pred CCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCC
Q 009715 166 KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGA 245 (528)
Q Consensus 166 ~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~ 245 (528)
.+++.|++|+.||.|++||+.+. +.. .....|...|++++| ++. +|++|+.||.|++||+.+.
T Consensus 141 ~d~~~l~~g~~dg~i~iwd~~~~-----~~~-------~~~~~h~~~v~~l~~--~~~-~l~sg~~dg~i~vwd~~~~-- 203 (435)
T 1p22_A 141 YDDQKIVSGLRDNTIKIWDKNTL-----ECK-------RILTGHTGSVLCLQY--DER-VIITGSSDSTVRVWDVNTG-- 203 (435)
T ss_dssp CCSSEEEEEESSSCEEEEESSSC-----CEE-------EEECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEESSSC--
T ss_pred ECCCEEEEEeCCCeEEEEeCCCC-----eEE-------EEEcCCCCcEEEEEE--CCC-EEEEEcCCCeEEEEECCCC--
Confidence 46789999999999999998761 111 112248999999999 666 9999999999999999752
Q ss_pred CCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEE---eeecccCC
Q 009715 246 GDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLI---CGGKSYYG 322 (528)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~---~~~~~~~~ 322 (528)
+.+..+..|...|.+++|++ .+|++++.|+.|++||+.+++.+ ..+.+|..
T Consensus 204 ------------------------~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~ 257 (435)
T 1p22_A 204 ------------------------EMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 257 (435)
T ss_dssp ------------------------CEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS
T ss_pred ------------------------cEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCC
Confidence 34666778899999999974 59999999999999999877644 66778999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEE
Q 009715 323 ALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLL 402 (528)
Q Consensus 323 ~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~l 402 (528)
.|.+++| ++++|++|+.|+.|++||+++++++..+.+|...|.+++|++ .++++++.|+.|++
T Consensus 258 ~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~---------------~~l~~g~~dg~i~i 320 (435)
T 1p22_A 258 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD---------------RLVVSGSSDNTIRL 320 (435)
T ss_dssp CEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET---------------TEEEEEETTSCEEE
T ss_pred cEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCC---------------CEEEEEeCCCeEEE
Confidence 9999999 788999999999999999999999999999999999999965 48999999999999
Q ss_pred EEccCCeEEEEeecC-CCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCC---------ceEEeecCCCCeEEEE
Q 009715 403 WDLEMDEIVVPLRRG-PLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLS---------PLVAHRVHTEPLSGLI 472 (528)
Q Consensus 403 wd~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~---------~~~~~~~h~~~V~~l~ 472 (528)
||+++++++..+..+ ..+..+.+ + ...+..++.++.+++||+...+ ++..+.+|...|.+++
T Consensus 321 wd~~~~~~~~~~~~h~~~v~~~~~--~------~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 392 (435)
T 1p22_A 321 WDIECGACLRVLEGHEELVRCIRF--D------NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ 392 (435)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEC--C------SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEE
T ss_pred EECCCCCEEEEEeCCcCcEEEEEe--c------CCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEE
Confidence 999999999888743 23334444 2 2567889999999999987655 7888899999999999
Q ss_pred EeCCeEEEEECCCeEEEEeCCCCcc
Q 009715 473 FTQESVLTVCREGHIKIWMRPGVAE 497 (528)
Q Consensus 473 ~s~d~l~t~s~Dg~i~iW~~~~~~~ 497 (528)
|....|++++.||.|++||+.....
T Consensus 393 ~~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 393 FDEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp ECSSCEEECCSSSEEEEEC------
T ss_pred eCCCEEEEEeCCCEEEEEECCCCCC
Confidence 9777899999999999999987653
No 91
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-31 Score=262.58 Aligned_cols=244 Identities=14% Similarity=0.184 Sum_probs=200.3
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|...|++++|+|+++ +|++|+.||.|+||++.... ...+..+..|...|.+++|
T Consensus 9 ~h~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~------------------------~~~~~~~~~h~~~v~~~~~ 63 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGK-RLATCSSDKTIKIFEVEGET------------------------HKLIDTLTGHEGPVWRVDW 63 (379)
T ss_dssp ECCCCEEEEEECSSSS-EEEEEETTSCEEEEEEETTE------------------------EEEEEEECCCSSCEEEEEE
T ss_pred CCcccEEEEEEcCCCC-EEEEEECCCcEEEEecCCCc------------------------ceeeeEecCCCCcEEEEEe
Confidence 4999999999999999 99999999999999986311 2345667789999999999
Q ss_pred CCC--CCEEEEEeCCCcEEEEecCCce--EEeeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCe--EEEEe
Q 009715 288 STD--GTYLATVGRDGYLRVFDYSKEQ--LICGGKSYYGALLCCAWSMD--GKYILTGGEDDLVQVWSMEDRK--VVAWG 359 (528)
Q Consensus 288 spd--g~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~l~~sp~--g~~l~sg~~dg~v~vwd~~~~~--~~~~~ 359 (528)
+++ +++|++++.||.|++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++.+. ....+
T Consensus 64 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 143 (379)
T 3jrp_A 64 AHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII 143 (379)
T ss_dssp CCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE
T ss_pred CCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe
Confidence 986 9999999999999999999887 67777889999999999999 9999999999999999998873 44566
Q ss_pred ecCCCCeEEEEEecCCCCC------CCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCcc
Q 009715 360 EGHNSWVSGVAFDSYWSQP------NSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAH 433 (528)
Q Consensus 360 ~~h~~~V~~v~f~p~~~~~------~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 433 (528)
.+|...|.+++|+|....+ .+++ .+|++++.|+.|++||++.+.....
T Consensus 144 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~------~~l~~~~~dg~i~i~d~~~~~~~~~-------------------- 197 (379)
T 3jrp_A 144 DAHAIGVNSASWAPATIEEDGEHNGTKES------RKFVTGGADNLVKIWKYNSDAQTYV-------------------- 197 (379)
T ss_dssp ECCTTCEEEEEECCCC----------CTT------CEEEEEETTSCEEEEEEETTTTEEE--------------------
T ss_pred cCCCCceEEEEEcCccccccccccCCCCC------CEEEEEeCCCeEEEEEecCCCccee--------------------
Confidence 7899999999999810000 0025 5899999999999999987643221
Q ss_pred CCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCC---e--EEEEECCCeEEEEeCCCCc-----cc--cCC
Q 009715 434 WDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQE---S--VLTVCREGHIKIWMRPGVA-----ES--QSS 501 (528)
Q Consensus 434 ~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d---~--l~t~s~Dg~i~iW~~~~~~-----~~--~~~ 501 (528)
.+..+.+|...|.+++|+|+ + |++++.||.|++||+.... .. ...
T Consensus 198 -----------------------~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 254 (379)
T 3jrp_A 198 -----------------------LESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEK 254 (379)
T ss_dssp -----------------------EEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSC
T ss_pred -----------------------eEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeecccc
Confidence 22345679999999999998 4 9999999999999998753 11 123
Q ss_pred Cccce--EEEccCCceEEEeeeeccc
Q 009715 502 SSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 502 ~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
+...+ ++|+||+++|++++.+|.+
T Consensus 255 ~~~~v~~~~~s~~g~~l~~~~~dg~i 280 (379)
T 3jrp_A 255 FPDVLWRASWSLSGNVLALSGGDNKV 280 (379)
T ss_dssp CSSCEEEEEECSSSCCEEEEESSSSE
T ss_pred CCCcEEEEEEcCCCCEEEEecCCCcE
Confidence 55666 8899999999999888765
No 92
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.5e-32 Score=274.09 Aligned_cols=240 Identities=12% Similarity=0.140 Sum_probs=193.2
Q ss_pred cCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEEC
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFS 288 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 288 (528)
+..+|++++|+|+++ +|++|+.||.|+|||+.... ...+..+.+|...|.+++|+
T Consensus 10 ~~~~v~~~~~s~~g~-~l~~~~~d~~i~iw~~~~~~------------------------~~~~~~~~~h~~~v~~~~~s 64 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRT-EFVTTTATNQVELYEQDGNG------------------------WKHARTFSDHDKIVTCVDWA 64 (377)
T ss_dssp CSSCCSCCEECSSSS-EEECCCSSSCBCEEEEETTE------------------------EEECCCBCCCSSCEEEEEEC
T ss_pred CCCcEEEEEECCCCC-EEEEecCCCEEEEEEccCCc------------------------eEEEEEEecCCceEEEEEEe
Confidence 667999999999999 99999999999999997521 02334456788999999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCce---EEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe---EEEEeec-
Q 009715 289 TDGTYLATVGRDGYLRVFDYSKEQ---LICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRK---VVAWGEG- 361 (528)
Q Consensus 289 pdg~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~---~~~~~~~- 361 (528)
|++++|++++.|+.|++||+.+++ ....+..|...|.+++|+|++++|++++.|+.|++||++.++ ++..+.+
T Consensus 65 ~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 144 (377)
T 3dwl_C 65 PKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRP 144 (377)
T ss_dssp TTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSS
T ss_pred CCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecc
Confidence 999999999999999999999877 566677899999999999999999999999999999999876 4677777
Q ss_pred CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc------------------CCeEEEEeecCCCCCCC
Q 009715 362 HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE------------------MDEIVVPLRRGPLGGSP 423 (528)
Q Consensus 362 h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~------------------~~~~~~~~~~~~~~~~~ 423 (528)
|...|.+++|+| ++ .+|++++.|+.|++||++ .++++..+.+...+..+
T Consensus 145 h~~~v~~~~~~~-------~~------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 211 (377)
T 3dwl_C 145 LRSTILSLDWHP-------NN------VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAV 211 (377)
T ss_dssp CCSCEEEEEECT-------TS------SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEE
T ss_pred cCCCeEEEEEcC-------CC------CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEE
Confidence 999999999999 88 699999999999999995 34455555444456678
Q ss_pred eecCCCCCccCCceeeeecCCCCceeeecCCCCc----eEEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCC
Q 009715 424 TFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSP----LVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRP 493 (528)
Q Consensus 424 ~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~----~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~ 493 (528)
.|++++ ..+..++.++.+++||+...+. +..+.+|...|.+++|+|++ |++++.|+ +.+|+..
T Consensus 212 ~~sp~~------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-~~~~~~~ 280 (377)
T 3dwl_C 212 GFSPSG------NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYS-PILLQGN 280 (377)
T ss_dssp EECTTS------SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSS-EEEECCC
T ss_pred EECCCC------CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCc-EEEEEeC
Confidence 888876 4677888999999999999887 88889999999999999985 66665555 4577654
No 93
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-30 Score=257.28 Aligned_cols=272 Identities=12% Similarity=0.185 Sum_probs=219.5
Q ss_pred ccCCceeEEEEeeC---CCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEE
Q 009715 208 VNNSRCTSVTWVPG---GDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINS 284 (528)
Q Consensus 208 ~h~~~v~~l~~~p~---g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 284 (528)
.|...|++++|+|+ |+ +|++|+.||.|++||+...+ ......+..|...|.+
T Consensus 37 ~h~~~v~~~~~~~~~~~g~-~l~~~~~dg~i~iw~~~~~~------------------------~~~~~~~~~h~~~v~~ 91 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGN-FLIAGSWANDVRCWEVQDSG------------------------QTIPKAQQMHTGPVLD 91 (368)
T ss_dssp CCSSCEEEEEECCTTSSSE-EEEEEETTSEEEEEEECTTS------------------------CEEEEEEEECSSCEEE
T ss_pred CCCCceEEEEEcCCCCCce-EEEEECCCCcEEEEEcCCCC------------------------ceeEEEeccccCCEEE
Confidence 49999999999999 46 99999999999999997521 1223667889999999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEE--cCCCCEEEEEeCCCcEEEEECCCCeEEEEeecC
Q 009715 285 IAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAW--SMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGH 362 (528)
Q Consensus 285 l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~--sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h 362 (528)
++|+|++++|++++.||.|++||+.+++.+. +..|...|.+++| +|++++|++++.|+.|++||+++++++..+..|
T Consensus 92 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 170 (368)
T 3mmy_A 92 VCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP 170 (368)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS
T ss_pred EEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC
Confidence 9999999999999999999999999998776 4569999999999 899999999999999999999999998888865
Q ss_pred CCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCC---CCCCCeecCCCCCccCCceee
Q 009715 363 NSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGP---LGGSPTFSTGSQSAHWDNVCP 439 (528)
Q Consensus 363 ~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~---~~~~~~~s~~~~~~~~d~~~~ 439 (528)
. .+.++.+.+ ..+++++.|+.+++||++............ ....+.+...... ....+.
T Consensus 171 ~-~~~~~~~~~---------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 232 (368)
T 3mmy_A 171 E-RCYCADVIY---------------PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQN--KPTGFA 232 (368)
T ss_dssp S-CEEEEEEET---------------TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTS--CEEEEE
T ss_pred C-CceEEEecC---------------CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCC--CCCeEE
Confidence 4 677777765 368888899999999998776544332211 1112222222210 111268
Q ss_pred eecCCCCceeeecCCC---CceEEeecCCC------------CeEEEEEeCCe--EEEEECCCeEEEEeCCCCccc--cC
Q 009715 440 VGTLQPAPSMRDVPKL---SPLVAHRVHTE------------PLSGLIFTQES--VLTVCREGHIKIWMRPGVAES--QS 500 (528)
Q Consensus 440 ~g~~~~~~~~~d~~~~---~~~~~~~~h~~------------~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~--~~ 500 (528)
.++.++.+++|++... .++..+.+|.. .|.+++|+|++ |++++.||.|++||+..+... ..
T Consensus 233 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 312 (368)
T 3mmy_A 233 LGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE 312 (368)
T ss_dssp EEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred EecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec
Confidence 8899999999999887 56778888876 79999999974 999999999999999876632 33
Q ss_pred CCccce--EEEccCCceEEEeeeec
Q 009715 501 SSSETV--LSTSSKDKPLLSSKVVT 523 (528)
Q Consensus 501 ~~~~~v--l~~spd~~~l~s~~~~g 523 (528)
.|...| ++|+||+++|++++.++
T Consensus 313 ~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 313 QLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp CCSSCEEEEEECTTSSCEEEEECCC
T ss_pred CCCCCceEEEECCCCCeEEEEeccc
Confidence 567777 88999999999998764
No 94
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=5e-31 Score=270.22 Aligned_cols=280 Identities=12% Similarity=0.089 Sum_probs=218.5
Q ss_pred cCCceeEEEEee-CCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 209 NNSRCTSVTWVP-GGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 209 h~~~v~~l~~~p-~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
|...|++++|+| +++ +|++|+.||+|+|||+....... .......+ .|...|.+++|
T Consensus 62 h~~~V~~~~~s~~~~~-~l~s~s~dg~v~vwd~~~~~~~~--------------------~~~~~~~~-~h~~~v~~~~~ 119 (437)
T 3gre_A 62 EPNSITSSAVSPGETP-YLITGSDQGVIKIWNLKEIIVGE--------------------VYSSSLTY-DCSSTVTQITM 119 (437)
T ss_dssp TTSCEEEEEEECSSSC-EEEEEETTSEEEEEEHHHHHTTC--------------------CCSCSEEE-ECSSCEEEEEE
T ss_pred CCCceEEEEECCCCCC-EEEEecCCceEEEeECcccccCc--------------------ccceeeec-cCCCCEEEEEE
Confidence 889999999999 888 99999999999999986411000 01112222 47899999999
Q ss_pred CCCCCEEEEEeCCCcEEEEecC---CceEEeeec----------c--cCCCeEEEE--EcCCCCEEEEEeCCCcEEEEEC
Q 009715 288 STDGTYLATVGRDGYLRVFDYS---KEQLICGGK----------S--YYGALLCCA--WSMDGKYILTGGEDDLVQVWSM 350 (528)
Q Consensus 288 spdg~~l~s~~~dg~i~vwd~~---~~~~~~~~~----------~--~~~~v~~l~--~sp~g~~l~sg~~dg~v~vwd~ 350 (528)
+|++++|++++.||.|++||+. +++.+..+. . +...+.++. +++++.+|++++.|+.|++||+
T Consensus 120 ~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~ 199 (437)
T 3gre_A 120 IPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDI 199 (437)
T ss_dssp CTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEET
T ss_pred eCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 9999999999999999999994 444333222 1 456677777 5688999999999999999999
Q ss_pred CCCeEEEEeec--CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec--CCCCCCCeec
Q 009715 351 EDRKVVAWGEG--HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR--GPLGGSPTFS 426 (528)
Q Consensus 351 ~~~~~~~~~~~--h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~--~~~~~~~~~s 426 (528)
++++++..+.+ |...|++++|+| ++ .+|++++.|+.|++||+++++++..+.. ...+..+.++
T Consensus 200 ~~~~~~~~~~~~~h~~~v~~~~~s~-------~~------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~ 266 (437)
T 3gre_A 200 RTLERLQIIENSPRHGAVSSICIDE-------EC------CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVC 266 (437)
T ss_dssp TTCCEEEEEECCGGGCCEEEEEECT-------TS------CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEEC
T ss_pred CCCeeeEEEccCCCCCceEEEEECC-------CC------CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEec
Confidence 99999999988 899999999999 88 7999999999999999999999888753 2344455443
Q ss_pred CCCCCccCCceeeeecCCCCceeeecCCCCceEEeec--------------------------CCCCeEEEEEeCC-eEE
Q 009715 427 TGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRV--------------------------HTEPLSGLIFTQE-SVL 479 (528)
Q Consensus 427 ~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~--------------------------h~~~V~~l~~s~d-~l~ 479 (528)
+.-. .-...+..++.++.+++||++..+.+..+.+ |...|++++|++. .|+
T Consensus 267 ~~~s--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~ 344 (437)
T 3gre_A 267 QFYG--KNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILL 344 (437)
T ss_dssp TTTC--TTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEE
T ss_pred cccC--CCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEE
Confidence 3210 0124668888999999999998887777764 4456888899954 499
Q ss_pred EEECCCeEEEEeCCCCcccc--CC-------------------------------------Cccce--EEEccC--CceE
Q 009715 480 TVCREGHIKIWMRPGVAESQ--SS-------------------------------------SSETV--LSTSSK--DKPL 516 (528)
Q Consensus 480 t~s~Dg~i~iW~~~~~~~~~--~~-------------------------------------~~~~v--l~~spd--~~~l 516 (528)
+++.|+.|++||+..+.... .. |.+.| ++++++ +++|
T Consensus 345 s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l 424 (437)
T 3gre_A 345 TDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLL 424 (437)
T ss_dssp EEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEE
T ss_pred ecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEE
Confidence 99999999999998765221 11 66777 677877 8899
Q ss_pred EEeeeeccc
Q 009715 517 LSSKVVTSS 525 (528)
Q Consensus 517 ~s~~~~gs~ 525 (528)
++++.+|.+
T Consensus 425 ~s~~~dG~I 433 (437)
T 3gre_A 425 VACDNSGLI 433 (437)
T ss_dssp EEEETTSCE
T ss_pred EEEcCCceE
Confidence 999988765
No 95
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=7.5e-32 Score=281.27 Aligned_cols=316 Identities=10% Similarity=0.022 Sum_probs=217.5
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeC------CCcEEEEEeCCceEEEE
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPG------GDGAFVVGHADGNLYVY 238 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~------g~~~l~tg~~dg~v~vw 238 (528)
++++..|++++.||.|+|||+...... ..... ....|.+.|++++|+|+ +. +||+++.||+|+||
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~----~~~~~----~l~~~~~~V~~v~wsp~~~~~~~~~-~LAs~s~DgtvrlW 240 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLH----CVKVQ----TIVHSFGEVWDLKWHEGCHAPHLVG-CLSFVSQEGTINFL 240 (524)
T ss_dssp ------------CEEEEEEEEETTTCC----EEEEE----EEEECCCSEEEEEECSSCCCSSSSC-EEEEEETTSCEEEE
T ss_pred chhhhhhccCCCCceEEEEEccCCCCC----ceEEE----EEEecCCcEEEEEECCCCCCCCCCc-eEEEEecCCeEEEE
Confidence 467778888999999999998752110 00000 01126788999999997 45 89999999999999
Q ss_pred EcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCce-EEeee
Q 009715 239 EKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQ-LICGG 317 (528)
Q Consensus 239 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~-~~~~~ 317 (528)
|+.......... . ....+...+.+|...|.+++|++++ .|++|+.||.|++||+++++ +...+
T Consensus 241 d~~~~~~~~~~~--------~-------~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~ 304 (524)
T 2j04_B 241 EIIDNATDVHVF--------K-------MCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYD 304 (524)
T ss_dssp ECCCCSSSSSEE--------E-------CCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEE
T ss_pred EcCCCccccccc--------e-------eecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEe
Confidence 997532110000 0 0124556788899999999999864 89999999999999998763 34557
Q ss_pred cccCCCeEEE--EEcCCC-CEEEEEeCCCcEEEEECCCCeEEEEeecCCC--CeEEEEEecCCCCCCCCCCccceeEEEE
Q 009715 318 KSYYGALLCC--AWSMDG-KYILTGGEDDLVQVWSMEDRKVVAWGEGHNS--WVSGVAFDSYWSQPNSDGTAETVMYRFG 392 (528)
Q Consensus 318 ~~~~~~v~~l--~~sp~g-~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~--~V~~v~f~p~~~~~~~dg~~~~~~~~l~ 392 (528)
..|...|.+| +|+|++ .+|++|+.|+.|+|||+++++++..+.+|.. .|.+++|+| ++ ..|+
T Consensus 305 ~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp-------~~------~~l~ 371 (524)
T 2j04_B 305 QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP-------QI------YSYI 371 (524)
T ss_dssp ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET-------TT------TEEE
T ss_pred ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCC-------Cc------CeEE
Confidence 7899999999 578888 8999999999999999999887777777764 588999999 88 5799
Q ss_pred EEeCCCeEEEEEccCCeEEEEee-cCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeec-----CCC
Q 009715 393 SVGQDTRLLLWDLEMDEIVVPLR-RGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRV-----HTE 466 (528)
Q Consensus 393 s~s~D~~i~lwd~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~-----h~~ 466 (528)
+++.|++|++||++.+.++..+. +...+.+++|++++ ..+..++.++.+++||+... .+..+.. +..
T Consensus 372 s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g------~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~ 444 (524)
T 2j04_B 372 YSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLH------PMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSL 444 (524)
T ss_dssp EECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSC------CBCEEEETTTEEECCBSCSS-TTTCC------CCCC
T ss_pred EeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCC------CeEEEEECCCEEEEEechHh-hccccccCccceeee
Confidence 99999999999999988766665 33567888998887 45678889999999997653 2222211 122
Q ss_pred CeEEEEEeCCe-EEEEECCCeEEEEeCCCCc-cccCCCccce--EEEccCCc---eEEEeeeeccc
Q 009715 467 PLSGLIFTQES-VLTVCREGHIKIWMRPGVA-ESQSSSSETV--LSTSSKDK---PLLSSKVVTSS 525 (528)
Q Consensus 467 ~V~~l~~s~d~-l~t~s~Dg~i~iW~~~~~~-~~~~~~~~~v--l~~spd~~---~l~s~~~~gs~ 525 (528)
.|.+++|+|++ ++....+-.+..|+..+.. ....+|...| ++|+|+++ .||+|+.+|.+
T Consensus 445 ~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~v 510 (524)
T 2j04_B 445 RLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLL 510 (524)
T ss_dssp EEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEE
T ss_pred EEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceE
Confidence 57899999975 4443333233333333332 3345677777 99999965 89999887654
No 96
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.98 E-value=5.9e-30 Score=256.12 Aligned_cols=280 Identities=12% Similarity=0.066 Sum_probs=202.2
Q ss_pred CCCCeEEEEecCC-------cEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEe--------
Q 009715 166 KDGHDLLIGLNSG-------DVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGH-------- 230 (528)
Q Consensus 166 ~~~~~l~~g~~~G-------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~-------- 230 (528)
++++.|++|+.+. .|++|++..........+.....+ ....|...|.+++++. . .+++|.
T Consensus 24 ~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~--~l~~~~~~v~s~~~~~--~-~~~~g~~~~~~~l~ 98 (365)
T 4h5i_A 24 NNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEF--ALEDNDDSPTAIDASK--G-IILVGCNENSTKIT 98 (365)
T ss_dssp ETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEE--ECCTTSCCCCEEEEET--T-EEEEECCCCHHHHH
T ss_pred CCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEE--EccCCCCceEEEEeCC--C-EEEEEECCCccEEE
Confidence 7888888887533 599999875322111111111111 1234778888887754 4 566653
Q ss_pred ---CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEe--CCCcEEE
Q 009715 231 ---ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVG--RDGYLRV 305 (528)
Q Consensus 231 ---~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~--~dg~i~v 305 (528)
.|+++++|++............. .......+...+++++|+|||++|++++ .|+.|+|
T Consensus 99 s~~~d~~~r~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~i 161 (365)
T 4h5i_A 99 QGKGNKHLRKFKYDKVNDQLEFLTSV-----------------DFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRI 161 (365)
T ss_dssp HTSCCCCEEEEEEETTTTEEEEEEEE-----------------CSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEE
T ss_pred EecCCCcEEEEEecCCCceEEEeeee-----------------ceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEE
Confidence 56789999886532110000000 0000112345688999999999987654 6899999
Q ss_pred EecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE--EeecCCCCeEEEEEecCCCCCCCCCC
Q 009715 306 FDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVA--WGEGHNSWVSGVAFDSYWSQPNSDGT 383 (528)
Q Consensus 306 wd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~--~~~~h~~~V~~v~f~p~~~~~~~dg~ 383 (528)
||+++++++..+. |...|.+|+|+|||++|++++.| .+++|+..+++.+. ...+|...|.+++|+| ||
T Consensus 162 wd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fsp-------dg- 231 (365)
T 4h5i_A 162 IDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIA-------DD- 231 (365)
T ss_dssp EETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEE-------TT-
T ss_pred eECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcC-------CC-
Confidence 9999999988876 77889999999999999999854 56777777776543 3456889999999999 99
Q ss_pred ccceeEEEEEEeCCC----eEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceE
Q 009715 384 AETVMYRFGSVGQDT----RLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLV 459 (528)
Q Consensus 384 ~~~~~~~l~s~s~D~----~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~ 459 (528)
.++++++.|+ .+++||+........ ...
T Consensus 232 -----~~l~~~s~d~~~~~~i~~~~~~~~~~~~~-------------------------------------------~~~ 263 (365)
T 4h5i_A 232 -----TVLIAASLKKGKGIVLTKISIKSGNTSVL-------------------------------------------RSK 263 (365)
T ss_dssp -----EEEEEEEESSSCCEEEEEEEEETTEEEEE-------------------------------------------EEE
T ss_pred -----CEEEEEecCCcceeEEeecccccceecce-------------------------------------------eee
Confidence 7999999887 688899877654321 122
Q ss_pred EeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCccc---cCCCccce--EEEccCCceEEEeeeeccc
Q 009715 460 AHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAES---QSSSSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 460 ~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~---~~~~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
.+.+|...|++++|+||+ |++|+.|++|+|||+.+++.. ...|...| ++|||||++||+++.++++
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tv 336 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTI 336 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeE
Confidence 456789999999999985 999999999999999887643 34688888 8999999999999988764
No 97
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=1.3e-29 Score=257.05 Aligned_cols=264 Identities=16% Similarity=0.265 Sum_probs=220.5
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEee-cCCCeEEEEECCC
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHI-CQGSINSIAFSTD 290 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~spd 290 (528)
.+.+++|++ . .+++++.||.|++|++..+ .....+.. |...|.+++|+|+
T Consensus 95 ~~~~~~~s~--~-~l~~~~~d~~v~lw~~~~~--------------------------~~~~~~~~~~~~~v~~v~~s~~ 145 (401)
T 4aez_A 95 YLNLLDWSN--L-NVVAVALERNVYVWNADSG--------------------------SVSALAETDESTYVASVKWSHD 145 (401)
T ss_dssp TCBCEEECT--T-SEEEEEETTEEEEEETTTC--------------------------CEEEEEECCTTCCEEEEEECTT
T ss_pred eEEEEeecC--C-CEEEEECCCeEEEeeCCCC--------------------------cEeEeeecCCCCCEEEEEECCC
Confidence 455677765 4 5788889999999999752 22233333 6789999999999
Q ss_pred CCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC-CCeEEEEeecCCCCeEEE
Q 009715 291 GTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSME-DRKVVAWGEGHNSWVSGV 369 (528)
Q Consensus 291 g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~-~~~~~~~~~~h~~~V~~v 369 (528)
+++|++++.||.|++||+.+++.+..+..|...|.+++| ++++|++++.|+.|++||++ ....+..+.+|...|.++
T Consensus 146 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 223 (401)
T 4aez_A 146 GSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGL 223 (401)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEE
T ss_pred CCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEE
Confidence 999999999999999999999999999999999999999 46799999999999999999 467788889999999999
Q ss_pred EEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec-CCCCCCCeecCCCCCccCCceeeee--cCCCC
Q 009715 370 AFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR-GPLGGSPTFSTGSQSAHWDNVCPVG--TLQPA 446 (528)
Q Consensus 370 ~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~d~~~~~g--~~~~~ 446 (528)
+|+| ++ .+|++++.|+.|++||+++++.+..+.. ...+..+.|++++. ..+..+ +.++.
T Consensus 224 ~~~~-------~~------~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~-----~ll~~~~gs~d~~ 285 (401)
T 4aez_A 224 AWRS-------DG------LQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQS-----NLLATGGGTMDKQ 285 (401)
T ss_dssp EECT-------TS------SEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTST-----TEEEEECCTTTCE
T ss_pred EEcC-------CC------CEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCC-----CEEEEecCCCCCE
Confidence 9999 88 6999999999999999999998887753 45677888888652 344443 47999
Q ss_pred ceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEE--CCCeEEEEeCCCCccc----cCCCccce--EEEccCCceE
Q 009715 447 PSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVC--REGHIKIWMRPGVAES----QSSSSETV--LSTSSKDKPL 516 (528)
Q Consensus 447 ~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s--~Dg~i~iW~~~~~~~~----~~~~~~~v--l~~spd~~~l 516 (528)
+++||+...+++..+. |...|.+++|+|++ |++++ .||.|++|++...... ...|...| ++++||+++|
T Consensus 286 i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l 364 (401)
T 4aez_A 286 IHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRIL 364 (401)
T ss_dssp EEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEE
T ss_pred EEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEE
Confidence 9999999999888875 66789999999975 77744 8999999999875422 23577777 8899999999
Q ss_pred EEeeeeccc
Q 009715 517 LSSKVVTSS 525 (528)
Q Consensus 517 ~s~~~~gs~ 525 (528)
++++.+|.+
T Consensus 365 ~s~~~dg~i 373 (401)
T 4aez_A 365 STAASDENL 373 (401)
T ss_dssp EEECTTSEE
T ss_pred EEEeCCCcE
Confidence 999888765
No 98
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3e-31 Score=270.92 Aligned_cols=313 Identities=12% Similarity=0.036 Sum_probs=220.8
Q ss_pred CCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCCCCCCCeEEEEecCCcEEEEEcc
Q 009715 107 GGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKDAKDGHDLLIGLNSGDVYSVSLR 186 (528)
Q Consensus 107 gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~~~~~~~l~~g~~~G~v~iwd~~ 186 (528)
.-.+.|.+|+++| +|.++++++. |+.+. +.... ..++. ++..-.-+.-.-+|.+..|++.
T Consensus 13 ~~~~~v~sv~~Sp-DG~~iASas~----------D~TV~--d~~~~---~~l~g----h~~~v~~V~FsPdg~~~~~~~~ 72 (588)
T 2j04_A 13 EFEDWKNNLTWAR-DGTLYLTTFP----------DISIG--QPKYA---KDINC----NSKNLFHVKEFPLEFENKLDFE 72 (588)
T ss_dssp CCSSSSCCEEECT-TSCEEEECSS----------SEEEE--EECCC---SCCSS----BGGGTEEEEEECCCCCCTTTTS
T ss_pred HhhccEEEEEECC-CCCEEEEEcC----------Cceee--ccccc---ceecC----CCccEEEEEECCCCCcceEEEE
Confidence 3457889999999 8888888875 55555 21111 11111 2222223333444555555554
Q ss_pred ccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCC
Q 009715 187 QQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRY 266 (528)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (528)
.... . ..++ ..|...|.+++|+|+|. +||+++.||.|++||...
T Consensus 73 ~~~~---~-----~~~~---~~~~~~V~~vawSPdG~-~LAs~s~dg~V~iwd~~~------------------------ 116 (588)
T 2j04_A 73 LAQQ---N-----GLLN---SQPVCYPRVCKPSPIDD-WMAVLSNNGNVSVFKDNK------------------------ 116 (588)
T ss_dssp CCCS---S-----CSST---TSCSCCEEEEEECSSSS-CEEEEETTSCEEEEETTE------------------------
T ss_pred eCCC---c-----eEee---cCCCCcEEEEEECCCCC-EEEEEeCCCcEEEEeCCc------------------------
Confidence 3100 0 0011 02678899999999999 999999999999999542
Q ss_pred CCCCCeEEEeecCC-----CeEEEEECCCCCEEEEEeCCCcEEEEecCCce-------EEeee----cccCCCeEEEEEc
Q 009715 267 SKSNPIARWHICQG-----SINSIAFSTDGTYLATVGRDGYLRVFDYSKEQ-------LICGG----KSYYGALLCCAWS 330 (528)
Q Consensus 267 ~~~~~~~~~~~h~~-----~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~-------~~~~~----~~~~~~v~~l~~s 330 (528)
.+..+. |.. .|.+++|||||++||+|+.||.|++||+.++. .+..+ .+|...|.+++|+
T Consensus 117 ----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS 191 (588)
T 2j04_A 117 ----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY 191 (588)
T ss_dssp ----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE
T ss_pred ----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEc
Confidence 122223 333 59999999999999999999999999999874 35555 5677899999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCeE---EEEe-ecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc
Q 009715 331 MDGKYILTGGEDDLVQVWSMEDRKV---VAWG-EGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 406 (528)
Q Consensus 331 p~g~~l~sg~~dg~v~vwd~~~~~~---~~~~-~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~ 406 (528)
||| +++++.|+.|++||+..++. ..++ .+|...|.+++|+- ..|++++ |++|++||+.
T Consensus 192 Pdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg---------------~~LASa~-~~tIkLWd~~ 253 (588)
T 2j04_A 192 EDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVD---------------YKVVLTC-PGYVHKIDLK 253 (588)
T ss_dssp TTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEET---------------TEEEEEC-SSEEEEEETT
T ss_pred CCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEEC---------------CEEEEEe-CCeEEEEECC
Confidence 999 88888999999999988763 3566 47899999999972 3788887 6999999999
Q ss_pred CCeE-EEEeecCCCCCCCee--cCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCeEEEEEC
Q 009715 407 MDEI-VVPLRRGPLGGSPTF--STGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCR 483 (528)
Q Consensus 407 ~~~~-~~~~~~~~~~~~~~~--s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~l~t~s~ 483 (528)
.++. ...+.+...+..+.| ++++ ..+.++..++. ++|... .++|+||+.++++.
T Consensus 254 ~~~~~~~~~gh~~~V~~va~~~s~d~------~~La~a~edG~-klw~~d----------------~~~~spd~~l~a~~ 310 (588)
T 2j04_A 254 NYSISSLKTGSLENFHIIPLNHEKES------TILLMSNKTSY-KVLLED----------------ELHVTADNIIAPYL 310 (588)
T ss_dssp TTEEEEEECSCCSCCCEEEETTCSSC------EEEEECSSCEE-EEEESS----------------SEEEECCCSSHHHH
T ss_pred CCeEEEEEcCCCceEEEEEeeeCCCC------CEEEEEcCCCC-EEEeec----------------cEEECCCceEEEEc
Confidence 9887 444455556677777 6665 34455555555 666543 25588887555556
Q ss_pred CCeEEEEeCCCCccccCCCccce--EEEccCCceEEEeee
Q 009715 484 EGHIKIWMRPGVAESQSSSSETV--LSTSSKDKPLLSSKV 521 (528)
Q Consensus 484 Dg~i~iW~~~~~~~~~~~~~~~v--l~~spd~~~l~s~~~ 521 (528)
|+++++|+..++..........| +++||||+.||++..
T Consensus 311 d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 311 EKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp HHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred CCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEe
Confidence 88899998876665444444445 899999999998754
No 99
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=5.8e-30 Score=252.29 Aligned_cols=237 Identities=13% Similarity=0.179 Sum_probs=197.4
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|...|++++|+|+++ +|++|+.||.|++||+..... ....+..+..|...|.+++|
T Consensus 9 gH~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~----------------------~~~~~~~~~~~~~~v~~~~~ 65 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGR-HVATCSSDQHIKVFKLDKDTS----------------------NWELSDSWRAHDSSIVAIDW 65 (351)
T ss_dssp CCSSCEEEEEECSSSS-EEEEEETTSEEEEEEECSSSC----------------------CEEEEEEEECCSSCEEEEEE
T ss_pred ccccceeEEEEcCCCC-EEEEeeCCCeEEEEECCCCCC----------------------cceecceeccCCCcEEEEEE
Confidence 4999999999999999 999999999999999975321 01345667889999999999
Q ss_pred CC--CCCEEEEEeCCCcEEEEecCCc---------eEEeeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCe
Q 009715 288 ST--DGTYLATVGRDGYLRVFDYSKE---------QLICGGKSYYGALLCCAWSMD--GKYILTGGEDDLVQVWSMEDRK 354 (528)
Q Consensus 288 sp--dg~~l~s~~~dg~i~vwd~~~~---------~~~~~~~~~~~~v~~l~~sp~--g~~l~sg~~dg~v~vwd~~~~~ 354 (528)
+| |+++|++++.|+.|++||++++ +.+..+..|...|.+++|+|+ +++|++++.|+.|++||+++++
T Consensus 66 ~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 66 ASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp CCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred cCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 99 6999999999999999999876 667788889999999999999 9999999999999999998876
Q ss_pred EEEEee-------------cCCCCeEEEEEecCCCCCCCC---CCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCC
Q 009715 355 VVAWGE-------------GHNSWVSGVAFDSYWSQPNSD---GTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGP 418 (528)
Q Consensus 355 ~~~~~~-------------~h~~~V~~v~f~p~~~~~~~d---g~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~ 418 (528)
.+..+. .|...+.+++|+| + + .+|++++.|+.+.+|+...++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~------~~l~~~~~~~~~~~~~~~~~~~~------- 205 (351)
T 3f3f_A 146 DLRSWTLTSEMKVLSIPPANHLQSDFCLSWCP-------SRFSP------EKLAVSALEQAIIYQRGKDGKLH------- 205 (351)
T ss_dssp CTTCCEEEEEEESCSCCCSSCSCCCEEEEECC-------CSSSC------CEEEEEETTEEEEEEECTTSCEE-------
T ss_pred HhccccccccccccccccCCcccceeEEEecc-------CCCCC------cEEEEecCCCcEEEEccCCCcee-------
Confidence 544332 5888999999998 6 5 68999999999988887665432
Q ss_pred CCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe------EEEEECCCeEEEEeC
Q 009715 419 LGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES------VLTVCREGHIKIWMR 492 (528)
Q Consensus 419 ~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~------l~t~s~Dg~i~iW~~ 492 (528)
.+..+.+|...|.+++|+|++ |++++.||.|++||+
T Consensus 206 --------------------------------------~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~ 247 (351)
T 3f3f_A 206 --------------------------------------VAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKI 247 (351)
T ss_dssp --------------------------------------EEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEE
T ss_pred --------------------------------------eeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeC
Confidence 122345689999999999983 999999999999998
Q ss_pred CCCc------------------------------------------------cccCCCccce--EEEccCCceEEEeeee
Q 009715 493 PGVA------------------------------------------------ESQSSSSETV--LSTSSKDKPLLSSKVV 522 (528)
Q Consensus 493 ~~~~------------------------------------------------~~~~~~~~~v--l~~spd~~~l~s~~~~ 522 (528)
.... .....|...| ++|+||+++|++++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 327 (351)
T 3f3f_A 248 TEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDD 327 (351)
T ss_dssp EECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETT
T ss_pred CCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCC
Confidence 7531 1122466777 8899999999999988
Q ss_pred ccc
Q 009715 523 TSS 525 (528)
Q Consensus 523 gs~ 525 (528)
|.+
T Consensus 328 g~v 330 (351)
T 3f3f_A 328 GKV 330 (351)
T ss_dssp SCE
T ss_pred CcE
Confidence 765
No 100
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.5e-30 Score=263.81 Aligned_cols=270 Identities=14% Similarity=0.140 Sum_probs=218.8
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC-C
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST-D 290 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-d 290 (528)
....++++|+...++++++.||.|+||++...+.. ...+..+.+|.+.|.+++|+| +
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~----------------------~~~~~~~~~h~~~V~~~~~~p~~ 93 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRV----------------------DKNVPLVCGHTAPVLDIAWCPHN 93 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEEC----------------------CTTCCCBCCCSSCEEEEEECTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCC----------------------CCCCceEecCCCCEEEEEeCCCC
Confidence 34568999987745556899999999999753221 123445677899999999999 9
Q ss_pred CCEEEEEeCCCcEEEEecCCc-------eEEeeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeEEEEe--e
Q 009715 291 GTYLATVGRDGYLRVFDYSKE-------QLICGGKSYYGALLCCAWSMDG-KYILTGGEDDLVQVWSMEDRKVVAWG--E 360 (528)
Q Consensus 291 g~~l~s~~~dg~i~vwd~~~~-------~~~~~~~~~~~~v~~l~~sp~g-~~l~sg~~dg~v~vwd~~~~~~~~~~--~ 360 (528)
+++|++++.||.|++||+.++ +.+..+.+|...|.+++|+|++ .+|++++.|+.|++||+++++++..+ .
T Consensus 94 ~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 173 (402)
T 2aq5_A 94 DNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPD 173 (402)
T ss_dssp TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTT
T ss_pred CCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecC
Confidence 999999999999999999987 5567788899999999999998 69999999999999999999999999 7
Q ss_pred cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEee-cCC--CCCCCeecCCCCCccCCce
Q 009715 361 GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLR-RGP--LGGSPTFSTGSQSAHWDNV 437 (528)
Q Consensus 361 ~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~-~~~--~~~~~~~s~~~~~~~~d~~ 437 (528)
+|...|.+++|+| +| .+|++++.|+.|++||+++++.+..+. ... .+..+.|++++ ..
T Consensus 174 ~~~~~v~~~~~~~-------~~------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 234 (402)
T 2aq5_A 174 VHPDTIYSVDWSR-------DG------ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEG------KI 234 (402)
T ss_dssp TCCSCEEEEEECT-------TS------SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTT------EE
T ss_pred CCCCceEEEEECC-------CC------CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCC------cE
Confidence 8999999999999 88 689999999999999999999988883 322 25667777765 45
Q ss_pred eeee---cCCCCceeeecCCCCc-eEEee-cCCCCeEEEEEeCCe--EE-EEECCCeEEEEeCCCCcc---cc--CCCcc
Q 009715 438 CPVG---TLQPAPSMRDVPKLSP-LVAHR-VHTEPLSGLIFTQES--VL-TVCREGHIKIWMRPGVAE---SQ--SSSSE 504 (528)
Q Consensus 438 ~~~g---~~~~~~~~~d~~~~~~-~~~~~-~h~~~V~~l~~s~d~--l~-t~s~Dg~i~iW~~~~~~~---~~--~~~~~ 504 (528)
+.++ ..++.+.+||++..+. +.... .|...|.+++|+|++ |+ +++.|+.|++|++..+.. .. ..+..
T Consensus 235 l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~ 314 (402)
T 2aq5_A 235 LTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKE 314 (402)
T ss_dssp EEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSS
T ss_pred EEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCC
Confidence 5666 6788999999988654 44433 577889999999984 64 555799999999987662 11 12345
Q ss_pred ce--EEEccCCceEEEeeee
Q 009715 505 TV--LSTSSKDKPLLSSKVV 522 (528)
Q Consensus 505 ~v--l~~spd~~~l~s~~~~ 522 (528)
.+ ++|+||+++++++...
T Consensus 315 ~v~~~~~sp~~~~~~s~~~~ 334 (402)
T 2aq5_A 315 SQRGMGYMPKRGLEVNKCEI 334 (402)
T ss_dssp CCSEEEECCGGGSCGGGTEE
T ss_pred cccceEEecccccceeccee
Confidence 55 9999999998876543
No 101
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=7.5e-30 Score=261.80 Aligned_cols=302 Identities=12% Similarity=0.177 Sum_probs=213.9
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccC------------CceeEEEEeeCC--CcEEEEEe
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNN------------SRCTSVTWVPGG--DGAFVVGH 230 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~------------~~v~~l~~~p~g--~~~l~tg~ 230 (528)
++++++|++|+.||.|++||+........... ...........|. ..|++++|+|++ . +|++++
T Consensus 37 s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~-~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~-~l~s~s 114 (447)
T 3dw8_B 37 NHSGELLATGDKGGRVVIFQQEQENKIQSHSR-GEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAA-QFLLST 114 (447)
T ss_dssp CSSSSEEEEEETTSEEEEEEECC-----CCCC-CCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSS-EEEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEEecCCCCCCcccc-cceeEecccccccccccccccccccCceEEEEEcCCCCcc-eEEEeC
Confidence 48899999999999999999986321000000 0001111122366 889999999998 5 899999
Q ss_pred CCceEEEEEcCCCCCCCCccccccccceeEEeccCC--------------CCCCCeEEE-eecCCCeEEEEECCCCCEEE
Q 009715 231 ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRY--------------SKSNPIARW-HICQGSINSIAFSTDGTYLA 295 (528)
Q Consensus 231 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~-~~h~~~v~~l~~spdg~~l~ 295 (528)
.||.|++|++.........+......... ...... ....+.+.+ .+|...|.+++|+|++++|+
T Consensus 115 ~d~~i~iw~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 193 (447)
T 3dw8_B 115 NDKTIKLWKISERDKRPEGYNLKEEDGRY-RDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYL 193 (447)
T ss_dssp CSSCEEEEEEEEEEEEEECCSCC---------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEE
T ss_pred CCCeEEEEecccccCCcceecccCccccc-cCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEE
Confidence 99999999987521100000000000000 000000 000112233 57999999999999999999
Q ss_pred EEeCCCcEEEEecCC-ceEEe-------eecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeE----EEEeecC
Q 009715 296 TVGRDGYLRVFDYSK-EQLIC-------GGKSYYGALLCCAWSMDG-KYILTGGEDDLVQVWSMEDRKV----VAWGEGH 362 (528)
Q Consensus 296 s~~~dg~i~vwd~~~-~~~~~-------~~~~~~~~v~~l~~sp~g-~~l~sg~~dg~v~vwd~~~~~~----~~~~~~h 362 (528)
++ .|+.|++||+++ ++.+. .+..|...|.+++|+|++ ++|++|+.|+.|++||+++++. +..+.+|
T Consensus 194 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 272 (447)
T 3dw8_B 194 SA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEP 272 (447)
T ss_dssp EE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC
T ss_pred Ee-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccC
Confidence 98 799999999994 44444 356799999999999998 9999999999999999999886 7788888
Q ss_pred CC------------CeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC-CeEEEEeecCCCCC--------
Q 009715 363 NS------------WVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM-DEIVVPLRRGPLGG-------- 421 (528)
Q Consensus 363 ~~------------~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~~~~~~-------- 421 (528)
.. .|.+++|+| +| .+|++++. +.|++||+++ ++++..+.......
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~-------~g------~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSH-------SG------RYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECT-------TS------SEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHH
T ss_pred CCccccccccccCceEEEEEECC-------CC------CEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccc
Confidence 76 899999999 98 68999988 9999999997 77777776543222
Q ss_pred --------CCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeec------------------------------
Q 009715 422 --------SPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRV------------------------------ 463 (528)
Q Consensus 422 --------~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~------------------------------ 463 (528)
.+.|++++ ..+..++.++.+++||+...+.+ .+..
T Consensus 339 ~~~i~~~~~~~~s~~~------~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (447)
T 3dw8_B 339 NDCIFDKFECCWNGSD------SVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVD 411 (447)
T ss_dssp TSGGGCCCCEEECTTS------SEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGG
T ss_pred ccccccceEEEECCCC------CEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCccccccccc
Confidence 26777776 55688899999999999887655 2222
Q ss_pred ---CCCCeEEEEEeCCe--EEEEECCCeEEEEeC
Q 009715 464 ---HTEPLSGLIFTQES--VLTVCREGHIKIWMR 492 (528)
Q Consensus 464 ---h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~ 492 (528)
+...|..++|+|++ |++++.| .+++|.-
T Consensus 412 ~~~~~~~i~~~~~~p~~~~la~~~~~-~~~~~~~ 444 (447)
T 3dw8_B 412 SLDFNKKILHTAWHPKENIIAVATTN-NLYIFQD 444 (447)
T ss_dssp GCCTTSCCCEEEECSSSSEEEEECSS-CEEEEEC
T ss_pred ccccCCceeEEEECCCCCEEEEEecc-eeeeecc
Confidence 34578899999975 6666665 4778764
No 102
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=2.3e-29 Score=257.98 Aligned_cols=261 Identities=18% Similarity=0.229 Sum_probs=222.8
Q ss_pred cCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEEC
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFS 288 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 288 (528)
|...|.|++| +++ +|++|+.||.|++||+.+ .+.+..+.+|.+.|.+++|
T Consensus 132 ~~~~v~~~~~--d~~-~l~~g~~dg~i~iwd~~~--------------------------~~~~~~~~~h~~~v~~l~~- 181 (435)
T 1p22_A 132 TSKGVYCLQY--DDQ-KIVSGLRDNTIKIWDKNT--------------------------LECKRILTGHTGSVLCLQY- 181 (435)
T ss_dssp SCCCEEEEEC--CSS-EEEEEESSSCEEEEESSS--------------------------CCEEEEECCCSSCEEEEEC-
T ss_pred CCCcEEEEEE--CCC-EEEEEeCCCeEEEEeCCC--------------------------CeEEEEEcCCCCcEEEEEE-
Confidence 6678998887 677 999999999999999875 2456677889999999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEE---EEeecCCCC
Q 009715 289 TDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVV---AWGEGHNSW 365 (528)
Q Consensus 289 pdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~---~~~~~h~~~ 365 (528)
++++|++++.||.|++||+.+++.+..+..|...|.+++|++ .++++|+.|+.|++||+++++.+ ..+.+|...
T Consensus 182 -~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 258 (435)
T 1p22_A 182 -DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAA 258 (435)
T ss_dssp -CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSC
T ss_pred -CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCc
Confidence 788999999999999999999999999999999999999974 59999999999999999987654 667789999
Q ss_pred eEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC-CCCCCCeecCCCCCccCCceeeeecCC
Q 009715 366 VSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG-PLGGSPTFSTGSQSAHWDNVCPVGTLQ 444 (528)
Q Consensus 366 V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~d~~~~~g~~~ 444 (528)
|.+++|+. .+|++++.|+.|++||+++++.+..+... ..+..+.+ + ...+.+++.+
T Consensus 259 v~~~~~~~---------------~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~------~~~l~~g~~d 315 (435)
T 1p22_A 259 VNVVDFDD---------------KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--R------DRLVVSGSSD 315 (435)
T ss_dssp EEEEEEET---------------TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--E------TTEEEEEETT
T ss_pred EEEEEeCC---------------CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--C------CCEEEEEeCC
Confidence 99999954 48999999999999999999999888753 22333333 1 3567889999
Q ss_pred CCceeeecCCCCceEEeecCCCCeEEEEEeCCeEEEEECCCeEEEEeCCCCc-----------cccCCCccceEEEccCC
Q 009715 445 PAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCREGHIKIWMRPGVA-----------ESQSSSSETVLSTSSKD 513 (528)
Q Consensus 445 ~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~l~t~s~Dg~i~iW~~~~~~-----------~~~~~~~~~vl~~spd~ 513 (528)
+.+++||+++.+++..+.+|...|.+++|.+..|++++.||.|++||+.... .....|...|.++..|+
T Consensus 316 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~ 395 (435)
T 1p22_A 316 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE 395 (435)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECS
T ss_pred CeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCC
Confidence 9999999999999999999999999999988889999999999999975433 22346777886666699
Q ss_pred ceEEEeeeeccc
Q 009715 514 KPLLSSKVVTSS 525 (528)
Q Consensus 514 ~~l~s~~~~gs~ 525 (528)
++|++++.+|.+
T Consensus 396 ~~l~s~s~Dg~i 407 (435)
T 1p22_A 396 FQIVSSSHDDTI 407 (435)
T ss_dssp SCEEECCSSSEE
T ss_pred CEEEEEeCCCEE
Confidence 999999988765
No 103
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.3e-30 Score=253.64 Aligned_cols=266 Identities=9% Similarity=0.045 Sum_probs=191.2
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
..+++.|++|+.||.|++||+.+. +... .. ....|.++.|+|+ +++++.|++|++|+.....
T Consensus 45 ~~d~~~l~sg~~Dg~v~iwd~~~~-----~~~~-~~--------~~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~ 106 (343)
T 3lrv_A 45 YYDKWVCMCRCEDGALHFTQLKDS-----KTIT-TI--------TTPNPRTGGEHPA----IISRGPCNRLLLLYPGNQI 106 (343)
T ss_dssp SEEEEEEEEEEETTEEEEEEESSS-----SCEE-EE--------EEECCCTTCCCCS----EEEECSTTEEEEEETTTEE
T ss_pred cCCCCEEEEECCCCcEEEEECCCC-----cEEE-EE--------ecCCceeeeeCCc----eEEecCCCeEEEEEccCce
Confidence 568889999999999999999762 1111 11 1346778888887 9999999999999976310
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEe-ecCCCeEEEEECC--CCCEEEEEeCCCcEEEEecCCceEEeeec-cc
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWH-ICQGSINSIAFST--DGTYLATVGRDGYLRVFDYSKEQLICGGK-SY 320 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp--dg~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~ 320 (528)
. .+. ......+.... .|.+.|.+++|+| ++++|++++.|+.|++||+++++.+.... .+
T Consensus 107 ~---~~~--------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~ 169 (343)
T 3lrv_A 107 T---ILD--------------SKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKS 169 (343)
T ss_dssp E---EEE--------------TTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCS
T ss_pred E---Eee--------------cCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCC
Confidence 0 000 00112233332 5668899999999 99999999999999999999998876653 35
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEE-EEeec-CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCC
Q 009715 321 YGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVV-AWGEG-HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT 398 (528)
Q Consensus 321 ~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~-~~~~~-h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~ 398 (528)
...+.+++|+|++.+|++|+.|+.|++||+++++.+ ..+.. |...|++++|+| +| .+|++++. +
T Consensus 170 ~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~-------~g------~~l~s~~~-~ 235 (343)
T 3lrv_A 170 DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD-------NG------YWMVVECD-Q 235 (343)
T ss_dssp SCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT-------TS------SEEEEEES-S
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC-------CC------CEEEEEeC-C
Confidence 568999999999999999999999999999999877 78887 999999999999 98 68999994 4
Q ss_pred eEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCe--EEEEEeCC
Q 009715 399 RLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPL--SGLIFTQE 476 (528)
Q Consensus 399 ~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V--~~l~~s~d 476 (528)
.|++||+++++.+..+.. +..|...+ .+++|+|+
T Consensus 236 ~v~iwd~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 236 TVVCFDLRKDVGTLAYPT--------------------------------------------YTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp BEEEEETTSSTTCBSSCC--------------------------------------------CBC-----CCEEEEECTT
T ss_pred eEEEEEcCCCCcceeecc--------------------------------------------cccccccccceEEEECCC
Confidence 999999998765433221 01122222 57999997
Q ss_pred e--EEEEEC-CCeEEEEeCCCCccccCCCccceEEEcc---CCceEEEeeeec
Q 009715 477 S--VLTVCR-EGHIKIWMRPGVAESQSSSSETVLSTSS---KDKPLLSSKVVT 523 (528)
Q Consensus 477 ~--l~t~s~-Dg~i~iW~~~~~~~~~~~~~~~vl~~sp---d~~~l~s~~~~g 523 (528)
+ |++++. |+.|++|++..............+.+.+ +.+.|+++..+|
T Consensus 272 g~~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 324 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDG 324 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC----CCCCEEEEEEETT
T ss_pred CCEEEEecCCCCcEEEEEEcccccceEecCceeEecCccccccceeEEEecCC
Confidence 4 888888 9999999986554221111111244444 555555554443
No 104
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.7e-29 Score=255.28 Aligned_cols=285 Identities=13% Similarity=0.121 Sum_probs=216.3
Q ss_pred ccCCceeEEEEee-CCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEE
Q 009715 208 VNNSRCTSVTWVP-GGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIA 286 (528)
Q Consensus 208 ~h~~~v~~l~~~p-~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 286 (528)
.|...|++++|+| +++ +|++|+.||.|++||+...... ..+..... ... ......+|...|.+++
T Consensus 41 ~h~~~v~~~~~s~~~~~-~l~~~~~dg~i~iw~~~~~~~~-~~~~~~~~---~~~---------~~~~~~~~~~~v~~~~ 106 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGR-YMLSGGSDGVIVLYDLENSSRQ-SYYTCKAV---CSI---------GRDHPDVHRYSVETVQ 106 (408)
T ss_dssp CCSSCEEEEEECTTTCC-EEEEEETTSCEEEEECCCCSSS-SCEEECEE---EEE---------CTTCTTCCSSCEEEEE
T ss_pred ccCCcEEEEEEecCCCC-EEEEEcCCCeEEEEECCCCccc-ceEecccc---ccc---------cccccccCCCcEEEEE
Confidence 3999999999999 888 9999999999999999863221 11110000 000 0000134789999999
Q ss_pred ECC-CCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCeEEEEeecC
Q 009715 287 FST-DGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMD---GKYILTGGEDDLVQVWSMEDRKVVAWGEGH 362 (528)
Q Consensus 287 ~sp-dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~---g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h 362 (528)
|+| ++.+|++++.|+.|++||+.+++.+..+. +...+.++.|+|. +.++++++.|+.|++||+++++.+..+.+|
T Consensus 107 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 185 (408)
T 4a11_B 107 WYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGH 185 (408)
T ss_dssp ECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCC
T ss_pred EccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCC
Confidence 999 78899999999999999999999888776 7788999999984 459999999999999999999999999999
Q ss_pred CCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCe-EEEEee----------------cCCCCCCCee
Q 009715 363 NSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDE-IVVPLR----------------RGPLGGSPTF 425 (528)
Q Consensus 363 ~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~-~~~~~~----------------~~~~~~~~~~ 425 (528)
...|.+++|+| +++ ++|++++.|+.|++||++.+. ++..+. +...+..+.|
T Consensus 186 ~~~v~~~~~~~-------~~~-----~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 186 RQEILAVSWSP-------RYD-----YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp CSCEEEEEECS-------SCT-----TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred CCcEEEEEECC-------CCC-----cEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 99999999999 872 369999999999999998775 333332 1123344556
Q ss_pred cCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCC-----Ce-EEEEEeC-CeEEEEECCCeEEEEeCCCCccc
Q 009715 426 STGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTE-----PL-SGLIFTQ-ESVLTVCREGHIKIWMRPGVAES 498 (528)
Q Consensus 426 s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~-----~V-~~l~~s~-d~l~t~s~Dg~i~iW~~~~~~~~ 498 (528)
++++ ..+.+++.++.+++||+...+.......+.. .+ ..+.... ..+++++.|+.|++||+..+...
T Consensus 254 ~~~~------~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 327 (408)
T 4a11_B 254 TSDG------LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI 327 (408)
T ss_dssp CTTS------SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE
T ss_pred cCCC------CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce
Confidence 6554 4677888999999999998776554433211 11 1111222 24888899999999999877643
Q ss_pred --cCCCccce--EEEccCCceEEEeeeeccc
Q 009715 499 --QSSSSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 499 --~~~~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
...|...| ++|+||+++|++++.+|.+
T Consensus 328 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 358 (408)
T 4a11_B 328 TMLKGHYKTVDCCVFQSNFQELYSGSRDCNI 358 (408)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred eeeccCCCeEEEEEEcCCCCEEEEECCCCeE
Confidence 33577777 8899999999999988765
No 105
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=6.9e-29 Score=253.25 Aligned_cols=267 Identities=18% Similarity=0.241 Sum_probs=218.1
Q ss_pred hhhhhhcCCCCCceee--ccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC-
Q 009715 88 SAAAKLLGTGNGSRTL--GFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD- 164 (528)
Q Consensus 88 ~~~~~~~~~~~g~~~~--sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~- 164 (528)
....++|++.+|.... .+.+|.+.|+||+|+| ++.++++++. ||.+.+|+......+..+..+...
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fsp-dg~~lasgs~----------Dg~v~iWd~~~~~~~~~~~~h~~~v 192 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTS----------SAEVQLWDVQQQKRLRNMTSHSARV 192 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEET----------TSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECC-CCCEEEEEEC----------CCeEEEEEcCCCcEEEEEeCCCCce
Confidence 4568999999998654 4457888999999999 7777777765 899999998887777766655444
Q ss_pred ---CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcC
Q 009715 165 ---AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKS 241 (528)
Q Consensus 165 ---~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~ 241 (528)
+.++..|++|+.++.+++||..... .... ....|...+.++.|+|++. ++++++.|+.|++|+..
T Consensus 193 ~~~s~~~~~l~sgs~d~~i~~~d~~~~~-----~~~~------~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 193 GSLSWNSYILSSGSRSGHIHHHDVRVAE-----HHVA------TLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EEEEEETTEEEEEETTSEEEEEETTSSS-----CEEE------EEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESS
T ss_pred EEEeeCCCEEEEEeCCCceeEeeecccc-----eeeE------EecccccceeeeeecCCCC-eeeeeeccccceEEeec
Confidence 6788999999999999999987621 1111 1123889999999999999 99999999999999987
Q ss_pred CCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC-CCEEEEE--eCCCcEEEEecCCceEEeeec
Q 009715 242 KDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD-GTYLATV--GRDGYLRVFDYSKEQLICGGK 318 (528)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd-g~~l~s~--~~dg~i~vwd~~~~~~~~~~~ 318 (528)
.... ....+.....|.+.|.+++|+|+ ..+++++ +.|+.|++||+.+++++..+.
T Consensus 261 ~~~~----------------------~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~ 318 (420)
T 4gga_A 261 PGEG----------------------GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD 318 (420)
T ss_dssp CCSS----------------------CSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE
T ss_pred cccc----------------------cceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec
Confidence 5321 12345566778899999999995 4566654 479999999999999988887
Q ss_pred ccCCCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeC
Q 009715 319 SYYGALLCCAWSMDGKYILTGG--EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQ 396 (528)
Q Consensus 319 ~~~~~v~~l~~sp~g~~l~sg~--~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~ 396 (528)
. ...+.++.|+|+++.+++++ .|+.|+|||+.+++++..+.+|.+.|++++|+| || .+|+|++.
T Consensus 319 ~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~sp-------dg------~~l~S~s~ 384 (420)
T 4gga_A 319 A-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP-------DG------ATVASAAA 384 (420)
T ss_dssp C-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-------TS------SCEEEEET
T ss_pred c-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-------CC------CEEEEEec
Confidence 5 46788999999999888765 689999999999999999999999999999999 99 68999999
Q ss_pred CCeEEEEEccCCeEEEE
Q 009715 397 DTRLLLWDLEMDEIVVP 413 (528)
Q Consensus 397 D~~i~lwd~~~~~~~~~ 413 (528)
|++|+|||+....+...
T Consensus 385 D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 385 DETLRLWRCFELDPARR 401 (420)
T ss_dssp TTEEEEECCSCSSCC--
T ss_pred CCeEEEEECCCCCccch
Confidence 99999999976554433
No 106
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=2.5e-28 Score=243.00 Aligned_cols=304 Identities=12% Similarity=0.045 Sum_probs=230.4
Q ss_pred hhhhcCCCCCceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCCCCCCC
Q 009715 90 AAKLLGTGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKDAKDGH 169 (528)
Q Consensus 90 ~~~~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~~~~~~ 169 (528)
....|..........+.+|.+.|+++.|+| ++ .+++
T Consensus 20 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---------------------~~-----------------------~~g~ 55 (368)
T 3mmy_A 20 SATTDNHNPMKDIEVTSSPDDSIGCLSFSP---------------------PT-----------------------LPGN 55 (368)
T ss_dssp ---CCSSCTTCCEECSSCCSSCEEEEEECC---------------------TT-----------------------SSSE
T ss_pred EeccCCCCCcceeEeccCCCCceEEEEEcC---------------------CC-----------------------CCce
Confidence 334556666666677788888888888876 10 1256
Q ss_pred eEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCc
Q 009715 170 DLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSS 249 (528)
Q Consensus 170 ~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~ 249 (528)
.|++|+.||.|++||+.... .... .....|...|++++|+|+++ +|++++.||.|++||+...
T Consensus 56 ~l~~~~~dg~i~iw~~~~~~----~~~~------~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~------ 118 (368)
T 3mmy_A 56 FLIAGSWANDVRCWEVQDSG----QTIP------KAQQMHTGPVLDVCWSDDGS-KVFTASCDKTAKMWDLSSN------ 118 (368)
T ss_dssp EEEEEETTSEEEEEEECTTS----CEEE------EEEEECSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTT------
T ss_pred EEEEECCCCcEEEEEcCCCC----ceeE------EEeccccCCEEEEEECcCCC-EEEEEcCCCcEEEEEcCCC------
Confidence 78889999999999987511 1110 11123899999999999999 9999999999999999752
Q ss_pred cccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE--CCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEE
Q 009715 250 FPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF--STDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCC 327 (528)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 327 (528)
.......|...|.+++| +|++.+|++++.|+.|++||+++++.+..+..+ ..+.++
T Consensus 119 ---------------------~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~ 176 (368)
T 3mmy_A 119 ---------------------QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP-ERCYCA 176 (368)
T ss_dssp ---------------------EEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS-SCEEEE
T ss_pred ---------------------CceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC-CCceEE
Confidence 22335568899999999 899999999999999999999999888877755 456666
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCeEEEE-e-ecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEc
Q 009715 328 AWSMDGKYILTGGEDDLVQVWSMEDRKVVAW-G-EGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDL 405 (528)
Q Consensus 328 ~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~-~-~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~ 405 (528)
.+. ...+++++.|+.+++|+++....... + ..+...+.++.+.+ +.. .....+++++.|+.|++||+
T Consensus 177 ~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 177 DVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFK-------DKQ--NKPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp EEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEE-------CTT--SCEEEEEEEETTSEEEEEES
T ss_pred Eec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcc-------cCC--CCCCeEEEecCCCcEEEEec
Confidence 665 45788899999999999987643322 2 23455667777765 331 11134999999999999999
Q ss_pred cCC---eEEEEeecCC-------------CCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeE
Q 009715 406 EMD---EIVVPLRRGP-------------LGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLS 469 (528)
Q Consensus 406 ~~~---~~~~~~~~~~-------------~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~ 469 (528)
+.. +.+..+.... .+..+.|++++ ..+..++.++.+++||+...+++..+.+|...|.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 319 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH------GTLATVGSDGRFSFWDKDARTKLKTSEQLDQPIS 319 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTT------CCEEEEETTSCEEEEETTTTEEEEECCCCSSCEE
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEEecCC------CEEEEEccCCeEEEEECCCCcEEEEecCCCCCce
Confidence 887 4444554432 46677788776 4678888999999999999999999999999999
Q ss_pred EEEEeCCe--EEEEECCCeEEEEeCC
Q 009715 470 GLIFTQES--VLTVCREGHIKIWMRP 493 (528)
Q Consensus 470 ~l~~s~d~--l~t~s~Dg~i~iW~~~ 493 (528)
+++|+|++ |++++.|+..+.|++.
T Consensus 320 ~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 320 ACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp EEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred EEEECCCCCeEEEEeccccccccccc
Confidence 99999985 9999999876666644
No 107
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.9e-28 Score=249.26 Aligned_cols=242 Identities=13% Similarity=0.093 Sum_probs=192.3
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEe--ecCCCeEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWH--ICQGSINSI 285 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l 285 (528)
.|...|++++|+|+++.++++++.||.|+|||+.... ...+..+. .|...|.++
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~------------------------~~~~~~~~~~~~~~~v~~~ 155 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTS------------------------KNVLKLRKRFCFSKRPNAI 155 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSS------------------------SSCEEEEEEEECSSCEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCC------------------------CceeeeeecccCCCCceEE
Confidence 3667899999999999334899999999999997210 12334443 566899999
Q ss_pred EECCCCCEEEEEeCCCcEEEEecCCceEEe----eecccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCeEEEE
Q 009715 286 AFSTDGTYLATVGRDGYLRVFDYSKEQLIC----GGKSYYGALLCCAWSMD---GKYILTGGEDDLVQVWSMEDRKVVAW 358 (528)
Q Consensus 286 ~~spdg~~l~s~~~dg~i~vwd~~~~~~~~----~~~~~~~~v~~l~~sp~---g~~l~sg~~dg~v~vwd~~~~~~~~~ 358 (528)
+|+|++++|++++.|+.|++|++.+++... .+.+|...|.+++|+|+ +++|++++.|+.|++||+++++++..
T Consensus 156 ~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~ 235 (450)
T 2vdu_B 156 SIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDK 235 (450)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEE
T ss_pred EEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeee
Confidence 999999999999999999999998776543 67789999999999999 99999999999999999999988877
Q ss_pred -eecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCC-------------------
Q 009715 359 -GEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGP------------------- 418 (528)
Q Consensus 359 -~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~------------------- 418 (528)
+.+|...|.+++|+ || .+|++++.|+.|++||+++++++..+....
T Consensus 236 ~~~~h~~~v~~~~~s--------d~------~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 236 WLFGHKHFVSSICCG--------KD------YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp ECCCCSSCEEEEEEC--------ST------TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-------
T ss_pred eecCCCCceEEEEEC--------CC------CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccc
Confidence 56899999999996 34 489999999999999999999888876321
Q ss_pred -------CCCCCeecCCCCCccCCceeeeec-CCCCceeeec--CCC---CceEEeecCCCCeEEEEEeCCe-EEEEEC-
Q 009715 419 -------LGGSPTFSTGSQSAHWDNVCPVGT-LQPAPSMRDV--PKL---SPLVAHRVHTEPLSGLIFTQES-VLTVCR- 483 (528)
Q Consensus 419 -------~~~~~~~s~~~~~~~~d~~~~~g~-~~~~~~~~d~--~~~---~~~~~~~~h~~~V~~l~~s~d~-l~t~s~- 483 (528)
.+..+.+++++ ..+.++. .++.+.+|++ ... +.+..+..| ..|.+++|+|+. +++.+.
T Consensus 302 ~~~~~~~~v~~i~~~~~~------~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~ 374 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNL------PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNK 374 (450)
T ss_dssp ---CBCCCEEEEEECSSS------SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCT
T ss_pred ccccceEEEEEEEEeCCC------CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecc
Confidence 11223344333 4455555 7889999999 444 667778888 889999999986 344332
Q ss_pred ------CCeEEEEeCCC
Q 009715 484 ------EGHIKIWMRPG 494 (528)
Q Consensus 484 ------Dg~i~iW~~~~ 494 (528)
+..|++|.+..
T Consensus 375 ~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 375 ESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp TCCSSCCCSEEEEEEET
T ss_pred cCCCCCCcceEEEEEEc
Confidence 45689998754
No 108
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7e-29 Score=271.75 Aligned_cols=244 Identities=14% Similarity=0.185 Sum_probs=200.4
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF 287 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 287 (528)
.|.+.|++++|+|+++ +|++|+.||.|+||++.... ...+..+.+|.+.|.+++|
T Consensus 7 gH~~~V~~l~~s~dg~-~latg~~dg~I~vwd~~~~~------------------------~~~~~~l~~h~~~V~~l~~ 61 (753)
T 3jro_A 7 AHNELIHDAVLDYYGK-RLATCSSDKTIKIFEVEGET------------------------HKLIDTLTGHEGPVWRVDW 61 (753)
T ss_dssp -CCCCEEEECCCSSSC-CEEEEETTTEEEEEEEETTE------------------------EEEEEEECCCSSCEEEEEE
T ss_pred cCcceeEEEEECCCCC-eEEEEECCCcEEEEecCCCC------------------------CccceeccCCcCceEEEEe
Confidence 4999999999999999 89999999999999987311 2345677889999999999
Q ss_pred CCC--CCEEEEEeCCCcEEEEecCCce--EEeeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCC--eEEEEe
Q 009715 288 STD--GTYLATVGRDGYLRVFDYSKEQ--LICGGKSYYGALLCCAWSMD--GKYILTGGEDDLVQVWSMEDR--KVVAWG 359 (528)
Q Consensus 288 spd--g~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~l~~sp~--g~~l~sg~~dg~v~vwd~~~~--~~~~~~ 359 (528)
+|+ +++|++++.||.|++||+.+++ .+..+..|...|.+++|+|+ ++++++|+.|+.|++||++.+ .....+
T Consensus 62 s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~ 141 (753)
T 3jro_A 62 AHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII 141 (753)
T ss_dssp CCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE
T ss_pred cCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe
Confidence 987 9999999999999999999887 67778889999999999999 999999999999999999887 344566
Q ss_pred ecCCCCeEEEEEecCCCCC------CCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCcc
Q 009715 360 EGHNSWVSGVAFDSYWSQP------NSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAH 433 (528)
Q Consensus 360 ~~h~~~V~~v~f~p~~~~~------~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 433 (528)
.+|...|.+++|+|....+ ..++ .+|++++.|+.|++||++++.....
T Consensus 142 ~~~~~~v~~l~~~p~~~~~~~~~~~~~d~------~~l~sgs~dg~I~iwd~~~~~~~~~-------------------- 195 (753)
T 3jro_A 142 DAHAIGVNSASWAPATIEEDGEHNGTKES------RKFVTGGADNLVKIWKYNSDAQTYV-------------------- 195 (753)
T ss_dssp ECCSSCEEEEEECCCC---------CGGG------CCEEEEETTSCEEEEEEETTTTEEE--------------------
T ss_pred ecCCCceEEEEecCcccccccccccCCCC------CEEEEEECCCeEEEEeccCCcccce--------------------
Confidence 7899999999999810000 0024 5899999999999999987642211
Q ss_pred CCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCC---e--EEEEECCCeEEEEeCCCCc-------cccCC
Q 009715 434 WDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQE---S--VLTVCREGHIKIWMRPGVA-------ESQSS 501 (528)
Q Consensus 434 ~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d---~--l~t~s~Dg~i~iW~~~~~~-------~~~~~ 501 (528)
++..+.+|...|.+++|+|+ + |++++.||.|++||+.... .....
T Consensus 196 -----------------------~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~ 252 (753)
T 3jro_A 196 -----------------------LESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEK 252 (753)
T ss_dssp -----------------------EEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSC
T ss_pred -----------------------eeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCC
Confidence 22345679999999999998 4 9999999999999988753 11223
Q ss_pred Cccce--EEEccCCceEEEeeeeccc
Q 009715 502 SSETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 502 ~~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
+...| ++|+||+++|++++.+|.+
T Consensus 253 ~~~~v~~l~~spdg~~l~s~s~Dg~I 278 (753)
T 3jro_A 253 FPDVLWRASWSLSGNVLALSGGDNKV 278 (753)
T ss_dssp CSSCCCCEEECTTTCCEEEECSSSCE
T ss_pred CCCceEEEEEcCCCCEEEEEcCCCEE
Confidence 55666 8999999999999888765
No 109
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.8e-29 Score=273.02 Aligned_cols=238 Identities=17% Similarity=0.311 Sum_probs=192.7
Q ss_pred CCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeC--CCcEEEEEeCCceEEEEEcCCCC
Q 009715 167 DGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPG--GDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 167 ~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
+++.|++|+.||.|++||+.... .........|...|++++|+|+ +. +|++|+.||.|++||+..+.
T Consensus 20 dg~~latg~~dg~I~vwd~~~~~----------~~~~~~l~~h~~~V~~l~~s~~~~~~-~l~s~s~Dg~I~vwd~~~~~ 88 (753)
T 3jro_A 20 YGKRLATCSSDKTIKIFEVEGET----------HKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWKEENGR 88 (753)
T ss_dssp SSCCEEEEETTTEEEEEEEETTE----------EEEEEEECCCSSCEEEEEECCTTSCS-EEEEEETTSCEEEEEEETTE
T ss_pred CCCeEEEEECCCcEEEEecCCCC----------CccceeccCCcCceEEEEecCCCCCC-EEEEEeCCCeEEEEECCCCc
Confidence 45678888899999999987311 0111112248999999999988 77 99999999999999987521
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC--CCEEEEEeCCCcEEEEecCCce--EEeeeccc
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD--GTYLATVGRDGYLRVFDYSKEQ--LICGGKSY 320 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd--g~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~ 320 (528)
...+..+..|...|.+++|+|+ +.+|++++.||.|++||+.++. ....+..|
T Consensus 89 ------------------------~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~ 144 (753)
T 3jro_A 89 ------------------------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH 144 (753)
T ss_dssp ------------------------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC
T ss_pred ------------------------ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC
Confidence 1245566778899999999998 9999999999999999998773 33455678
Q ss_pred CCCeEEEEEcC-------------CCCEEEEEeCCCcEEEEECCCC----eEEEEeecCCCCeEEEEEecCCCCCCCC--
Q 009715 321 YGALLCCAWSM-------------DGKYILTGGEDDLVQVWSMEDR----KVVAWGEGHNSWVSGVAFDSYWSQPNSD-- 381 (528)
Q Consensus 321 ~~~v~~l~~sp-------------~g~~l~sg~~dg~v~vwd~~~~----~~~~~~~~h~~~V~~v~f~p~~~~~~~d-- 381 (528)
...|.+++|+| ++.+|++|+.||.|++||++++ .++..+.+|...|.+++|+| +
T Consensus 145 ~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-------~~~ 217 (753)
T 3jro_A 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-------TVL 217 (753)
T ss_dssp SSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-------CCS
T ss_pred CCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc-------CCC
Confidence 99999999999 5899999999999999999876 56778889999999999999 8
Q ss_pred -CCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEE
Q 009715 382 -GTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVA 460 (528)
Q Consensus 382 -g~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~ 460 (528)
+ .+|++++.|+.|++||+++++..... .+..
T Consensus 218 ~~------~~l~s~s~Dg~I~iwd~~~~~~~~~~------------------------------------------~~~~ 249 (753)
T 3jro_A 218 LR------SYLASVSQDRTCIIWTQDNEQGPWKK------------------------------------------TLLK 249 (753)
T ss_dssp SS------EEEEEEESSSCEEEEEESSSSSCCBC------------------------------------------CBSS
T ss_pred CC------CEEEEEecCCEEEEecCCCCCCccee------------------------------------------EEec
Confidence 7 79999999999999999875421000 0111
Q ss_pred eecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCC
Q 009715 461 HRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPG 494 (528)
Q Consensus 461 ~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~ 494 (528)
...|...|++++|+|++ |++++.||.|++|++..
T Consensus 250 ~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 250 EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred cCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 23578899999999985 99999999999999873
No 110
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.6e-28 Score=251.29 Aligned_cols=254 Identities=13% Similarity=0.211 Sum_probs=210.2
Q ss_pred cCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEEC
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFS 288 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 288 (528)
|.+.|++++|+|++..+|++++.||.|++|++........ ......++..+.+|...|.+++|+
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~----------------~~~~~~~~~~~~~h~~~v~~l~~~ 190 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE----------------PSGECQPDLRLRGHQKEGYGLSWN 190 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC----------------TTCCCCCSEEEECCSSCCCCEEEC
T ss_pred CCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC----------------ccccCCCcEEecCCCCCeEEEEeC
Confidence 8999999999998444999999999999999975211100 011246778888999999999999
Q ss_pred CCCC-EEEEEeCCCcEEEEecCCceE-------EeeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCC---eEE
Q 009715 289 TDGT-YLATVGRDGYLRVFDYSKEQL-------ICGGKSYYGALLCCAWSM-DGKYILTGGEDDLVQVWSMEDR---KVV 356 (528)
Q Consensus 289 pdg~-~l~s~~~dg~i~vwd~~~~~~-------~~~~~~~~~~v~~l~~sp-~g~~l~sg~~dg~v~vwd~~~~---~~~ 356 (528)
|++. +|++++.||.|++||+.++.. ...+..|...|.+++|+| ++.+|++++.|+.|++||++++ +++
T Consensus 191 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 191 PNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp TTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCS
T ss_pred CCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcce
Confidence 9888 999999999999999987321 345667999999999999 7789999999999999999987 577
Q ss_pred EEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC-CeEEEEee-cCCCCCCCeecCCCCCccC
Q 009715 357 AWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM-DEIVVPLR-RGPLGGSPTFSTGSQSAHW 434 (528)
Q Consensus 357 ~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~-~~~~~~~~~~s~~~~~~~~ 434 (528)
..+..|...|++++|+| ++. ++|++++.|+.|++||++. .+.+..+. +...+..+.|++++.
T Consensus 271 ~~~~~~~~~v~~i~~~p-------~~~-----~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~---- 334 (430)
T 2xyi_A 271 HTVDAHTAEVNCLSFNP-------YSE-----FILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE---- 334 (430)
T ss_dssp EEEECCSSCEEEEEECS-------SCT-----TEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCT----
T ss_pred eEeecCCCCeEEEEeCC-------CCC-----CEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCC----
Confidence 78889999999999999 772 3799999999999999998 55566665 335667778877652
Q ss_pred CceeeeecCCCCceeeecCC--------------CCceEEeecCCCCeEEEEEeCC---eEEEEECCCeEEEEeCCCC
Q 009715 435 DNVCPVGTLQPAPSMRDVPK--------------LSPLVAHRVHTEPLSGLIFTQE---SVLTVCREGHIKIWMRPGV 495 (528)
Q Consensus 435 d~~~~~g~~~~~~~~~d~~~--------------~~~~~~~~~h~~~V~~l~~s~d---~l~t~s~Dg~i~iW~~~~~ 495 (528)
..+..++.++.+++||+.. .+.+..+.+|...|.+++|+|+ .|++++.||.|+||++...
T Consensus 335 -~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 335 -TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp -TEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred -CEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 3567888899999999986 3567788899999999999997 4899999999999998754
No 111
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=2.8e-29 Score=253.81 Aligned_cols=248 Identities=11% Similarity=0.069 Sum_probs=169.7
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC--
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST-- 289 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-- 289 (528)
.+....+.+++. +|++++.|++|+|||.+...... ...+..+.+|.+.|++++|+|
T Consensus 91 ~~~~~~~~~~~~-~las~~~d~~v~lw~~~~~~~~~---------------------~~~~~~~~gH~~~v~~v~~~p~~ 148 (393)
T 4gq1_A 91 DGNVNSSPVYSL-FLACVCQDNTVRLIITKNETIIT---------------------QHVLGGKSGHHNFVNDIDIADVY 148 (393)
T ss_dssp ------CCEEEE-EEEEEETTSCEEEEEEETTEEEE---------------------EEEECTTTSCSSCEEEEEEEEEE
T ss_pred CcceeecCCCCC-EEEEEeCCCcEEEEECCCCccce---------------------eeeecccCCCCCceEEEEEcccc
Confidence 333344445555 89999999999999987521100 011223567999999999997
Q ss_pred ------CCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeEEEE----
Q 009715 290 ------DGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGK-YILTGGEDDLVQVWSMEDRKVVAW---- 358 (528)
Q Consensus 290 ------dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~-~l~sg~~dg~v~vwd~~~~~~~~~---- 358 (528)
|+++||+++.|++|+|||+.++.++..+..|...+.+++|+|++. +|++++.|+.|++||+++++....
T Consensus 149 ~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~ 228 (393)
T 4gq1_A 149 SADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQT 228 (393)
T ss_dssp CTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC--------
T ss_pred ccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCccccccccc
Confidence 789999999999999999998888888888999999999999875 799999999999999988654322
Q ss_pred ---------------------eecCCCCeEEEEEe-cCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 359 ---------------------GEGHNSWVSGVAFD-SYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 359 ---------------------~~~h~~~V~~v~f~-p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
..+|...|.++.|. | || ..|++++.|+++++||+..++....+..
T Consensus 229 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~-------dg------~~l~s~s~d~~i~vwd~~~~~~~~~l~~ 295 (393)
T 4gq1_A 229 ELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGS-------DG------SGILAMCKSGAWLRWNLFANNDYNEISD 295 (393)
T ss_dssp --CSCCCSEEEESGGGC------CCSSSCSEEEEETT-------TT------CEEEEECTTSEEEEEEC-----------
T ss_pred CCcccceEEecccccceeeeecccccccceeeeeecC-------CC------CEEEEEeCCCCEEEEECccCCCCceEee
Confidence 23678889999997 5 88 6899999999999999998876655543
Q ss_pred CC-CCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeC--C--eEEEEECCCeEEEEe
Q 009715 417 GP-LGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQ--E--SVLTVCREGHIKIWM 491 (528)
Q Consensus 417 ~~-~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~--d--~l~t~s~Dg~i~iW~ 491 (528)
.. ....+.+.+ .......+...+ ...|+| + .+++++.||.|++||
T Consensus 296 ~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~sgs~Dg~V~lwd 345 (393)
T 4gq1_A 296 STMKLGPKNLLP-----------------------------NVQGISLFPSLL-GACPHPRYMDYFATAHSQHGLIQLIN 345 (393)
T ss_dssp --------CCSC-----------------------------SEEEECSSCCSS-CCEECSSCTTEEEEEETTTTEEEEEE
T ss_pred ecCccccEEEcc-----------------------------ccccccccCcce-eEEEccCCCCEEEEEECCCCEEEEEE
Confidence 11 111111111 112222233333 344555 2 267788999999999
Q ss_pred CCCCccc--cCCCccce--EEEccCCceEEEeeeecc
Q 009715 492 RPGVAES--QSSSSETV--LSTSSKDKPLLSSKVVTS 524 (528)
Q Consensus 492 ~~~~~~~--~~~~~~~v--l~~spd~~~l~s~~~~gs 524 (528)
+..+... ...|...| ++|+|||++||+++.+|.
T Consensus 346 ~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 346 TYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp TTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEE
T ss_pred CCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 9876543 33566777 899999999999987764
No 112
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=8.9e-28 Score=239.37 Aligned_cols=307 Identities=12% Similarity=-0.005 Sum_probs=199.0
Q ss_pred hcCCCCCceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC----CCCC
Q 009715 93 LLGTGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD----AKDG 168 (528)
Q Consensus 93 ~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~----~~~~ 168 (528)
+|.+.+...+..+.+|.+.|++++|+| ++.++++++. ++ +.+|+......+......... .+++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~-dg~~la~g~~----------~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQ-DQSCLILSTL----------KS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRT 70 (355)
T ss_dssp ----------------CCCCCEEEECT-TSSEEEEECS----------SE-EEEEEETTEEEEEEEECSCCCEEEECTTS
T ss_pred cccccccCCccccccCCCceEEEEECC-CCCEEEEEcC----------CE-EEEEecCCcceeeeeecCCeEEEEEcCCC
Confidence 344555555556789999999999999 6667776664 33 557776554333322221111 5666
Q ss_pred CeE-EEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCC
Q 009715 169 HDL-LIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGD 247 (528)
Q Consensus 169 ~~l-~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~ 247 (528)
+.+ ++|..++.|++||+.+. +. ..... +...|.+++|+++. ++++ .|+.|++||+.......
T Consensus 71 ~~~~~~~~~d~~v~iWd~~~~-----~~-~~~~~-------~~~~v~~v~~~~~~---~~~~-~~~~i~i~d~~~~~~~~ 133 (355)
T 3vu4_A 71 NYVAFVTGVKEVVHIWDDVKK-----QD-VSRIK-------VDAPVKDLFLSREF---IVVS-YGDVISVFKFGNPWKRI 133 (355)
T ss_dssp SEEEEECSSTTEEEEEETTTT-----EE-EEEEE-------CSSCEEEEEECSSE---EEEE-ETTEEEEEESSTTCCBS
T ss_pred CEEEEEECCccEEEEEECCCC-----cE-EEEEE-------CCCceEEEEEcCCE---EEEE-EcCEEEEEECCCCceee
Confidence 666 56888899999998762 11 11121 56689999998863 4444 37899999998631221
Q ss_pred CccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEE--EeCCCcEEEEecCCce-------------
Q 009715 248 SSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLAT--VGRDGYLRVFDYSKEQ------------- 312 (528)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s--~~~dg~i~vwd~~~~~------------- 312 (528)
..+. . ....+++++ .++++ ++.||.|++||+.+++
T Consensus 134 ~~~~-------------------------~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~ 183 (355)
T 3vu4_A 134 TDDI-------------------------R---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKA 183 (355)
T ss_dssp SCCE-------------------------E---EEEEEEEET--TEEEEEESSCTTCEEEEECCC---------------
T ss_pred EEec-------------------------c---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccc
Confidence 1111 1 223455666 56776 5789999999999765
Q ss_pred ---EEeeecccCCCeEEEEEcCCCCEEEEEeCCCc-EEEEECCCCeEEEEee-c-CCCCeEEEEEecCCCCCCCCCCccc
Q 009715 313 ---LICGGKSYYGALLCCAWSMDGKYILTGGEDDL-VQVWSMEDRKVVAWGE-G-HNSWVSGVAFDSYWSQPNSDGTAET 386 (528)
Q Consensus 313 ---~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~-v~vwd~~~~~~~~~~~-~-h~~~V~~v~f~p~~~~~~~dg~~~~ 386 (528)
.+..+.+|.+.|.+++|+|++++|++|+.|+. |+|||+++++++..+. + |...|.+++|+| ||
T Consensus 184 ~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~-------~~---- 252 (355)
T 3vu4_A 184 ILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWST-------DG---- 252 (355)
T ss_dssp ---CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECT-------TS----
T ss_pred cCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECC-------CC----
Confidence 15678899999999999999999999999998 9999999999999998 6 999999999999 99
Q ss_pred eeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCC
Q 009715 387 VMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTE 466 (528)
Q Consensus 387 ~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~ 466 (528)
.+|++++.|++|++||++.+........ ... +.+......|. ...+.++ ..+..
T Consensus 253 --~~l~s~s~d~~v~iw~~~~~~~~~~~~~----~~~-~~~~~~~~~~~-----------~~~~~~~--------~~~~~ 306 (355)
T 3vu4_A 253 --SKLAVVSDKWTLHVFEIFNDQDNKRHAL----KGW-INMKYFQSEWS-----------LCNFKLS--------VDKHV 306 (355)
T ss_dssp --CEEEEEETTCEEEEEESSCCSCCCSEET----TTT-EECCCCCCSSC-----------SEEEECC--------CCTTC
T ss_pred --CEEEEEECCCEEEEEEccCCCCcccccc----cce-eeccccccccc-----------eeEEEec--------cCCCC
Confidence 7999999999999999987532111110 000 11100000111 0011111 11233
Q ss_pred CeEEEEEeCCe--EEEEECCCeEEEEeCCCC
Q 009715 467 PLSGLIFTQES--VLTVCREGHIKIWMRPGV 495 (528)
Q Consensus 467 ~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~ 495 (528)
....++|++|+ |++++.||.+++|++..+
T Consensus 307 ~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 307 RGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred CceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 45679999985 999999999999998654
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=9.1e-29 Score=244.23 Aligned_cols=280 Identities=12% Similarity=0.046 Sum_probs=211.2
Q ss_pred cCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcE---EEEeCCCCCCC------CCCCC-eEEEE
Q 009715 105 FGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAI---FISDLNSQDKD------AKDGH-DLLIG 174 (528)
Q Consensus 105 f~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i---~v~~~~~~~~~------~~~~~-~l~~g 174 (528)
..+|.+.|.+++|+| ++.++++++. ++.+.+|+..... .+..+...... +++++ .|++|
T Consensus 7 ~~~h~~~v~~~~~s~-~~~~l~~~~~----------d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 75 (342)
T 1yfq_A 7 EQAPKDYISDIKIIP-SKSLLLITSW----------DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVG 75 (342)
T ss_dssp SSCCSSCEEEEEEEG-GGTEEEEEET----------TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEE
T ss_pred ccCCCCcEEEEEEcC-CCCEEEEEcC----------CCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEE
Confidence 358999999999999 5555555543 7788888754321 11111111111 77899 99999
Q ss_pred ecCCcEEEEEc-cccccccccceeeeeeeccCCcc--cCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccc
Q 009715 175 LNSGDVYSVSL-RQQLQDVGKKLVGAHHYNKDGSV--NNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFP 251 (528)
Q Consensus 175 ~~~G~v~iwd~-~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~ 251 (528)
+.+|.|++||+ .... . ..... |...|++++|+| +. +|++++.|+.|++||+..........
T Consensus 76 ~~dg~i~~wd~~~~~~-----~--------~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~- 139 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPS-----F--------QALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAV- 139 (342)
T ss_dssp ETTSCEEEECSSSSSS-----E--------EECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEE-
T ss_pred cCCCeEEEEEeccCCc-----e--------EeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccc-
Confidence 99999999999 6521 0 11223 888999999999 77 99999999999999987411000000
Q ss_pred cccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCC-ce--EEeeecccCCCeEEEE
Q 009715 252 VIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSK-EQ--LICGGKSYYGALLCCA 328 (528)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~-~~--~~~~~~~~~~~v~~l~ 328 (528)
...++..+. |...|.+++|+|++ |++++.|+.|++||+++ +. .......|...+.+++
T Consensus 140 ----------------~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~ 200 (342)
T 1yfq_A 140 ----------------KNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVA 200 (342)
T ss_dssp ----------------EESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEE
T ss_pred ----------------cCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEE
Confidence 001111122 56899999999987 99999999999999987 43 3334456788999999
Q ss_pred EcC-CCCEEEEEeCCCcEEEEECCCC------eEEEEeecCCC---------CeEEEEEecCCCCCCCCCCccceeEEEE
Q 009715 329 WSM-DGKYILTGGEDDLVQVWSMEDR------KVVAWGEGHNS---------WVSGVAFDSYWSQPNSDGTAETVMYRFG 392 (528)
Q Consensus 329 ~sp-~g~~l~sg~~dg~v~vwd~~~~------~~~~~~~~h~~---------~V~~v~f~p~~~~~~~dg~~~~~~~~l~ 392 (528)
|+| +++++++++.|+.|++|+++.. +.+..+..|.. .|.+++|+| ++ .+|+
T Consensus 201 ~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-------~~------~~l~ 267 (342)
T 1yfq_A 201 LLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-------RH------KFLY 267 (342)
T ss_dssp ECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT-------TT------CCEE
T ss_pred ECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC-------CC------CEEE
Confidence 999 9999999999999999999887 77788888865 999999999 88 6899
Q ss_pred EEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecC-CCCeEEE
Q 009715 393 SVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVH-TEPLSGL 471 (528)
Q Consensus 393 s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h-~~~V~~l 471 (528)
+++.|+.|++||+.+++.+..+. +| ...|.++
T Consensus 268 ~~~~dg~i~vwd~~~~~~~~~~~-----------------------------------------------~~h~~~v~~~ 300 (342)
T 1yfq_A 268 TAGSDGIISCWNLQTRKKIKNFA-----------------------------------------------KFNEDSVVKI 300 (342)
T ss_dssp EEETTSCEEEEETTTTEEEEECC-----------------------------------------------CCSSSEEEEE
T ss_pred EecCCceEEEEcCccHhHhhhhh-----------------------------------------------cccCCCceEe
Confidence 99999999999999888765443 46 8889999
Q ss_pred EEeCC--eEEEEECCCe-EEEEeC
Q 009715 472 IFTQE--SVLTVCREGH-IKIWMR 492 (528)
Q Consensus 472 ~~s~d--~l~t~s~Dg~-i~iW~~ 492 (528)
+ |+ .|++++.||. .+.|..
T Consensus 301 ~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 301 A--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp E--ECSSEEEEEEECTHHHHCSSS
T ss_pred c--CCCCeEEEEecCCcccccccc
Confidence 9 65 4999999998 555553
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.2e-28 Score=248.58 Aligned_cols=246 Identities=15% Similarity=0.128 Sum_probs=169.9
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
+|||..+++++.|++|+ |... . +....|...|.+++|+|+| .++.+.+|+.+.
T Consensus 24 SpDG~~iASas~D~TV~--d~~~-----~----------~~l~gh~~~v~~V~FsPdg--------~~~~~~~~~~~~-- 76 (588)
T 2j04_A 24 ARDGTLYLTTFPDISIG--QPKY-----A----------KDINCNSKNLFHVKEFPLE--------FENKLDFELAQQ-- 76 (588)
T ss_dssp CTTSCEEEECSSSEEEE--EECC-----C----------SCCSSBGGGTEEEEEECCC--------CCCTTTTSCCCS--
T ss_pred CCCCCEEEEEcCCceee--cccc-----c----------ceecCCCccEEEEEECCCC--------CcceEEEEeCCC--
Confidence 78999999999998888 5322 0 1112488899999999987 355555554331
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCC--
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYG-- 322 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-- 322 (528)
.....+ .|...|.+++|+|||.+||+++.||.|++||.+. ++..+. |..
T Consensus 77 ~~~~~~--------------------------~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~ 127 (588)
T 2j04_A 77 NGLLNS--------------------------QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNL 127 (588)
T ss_dssp SCSSTT--------------------------SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCS
T ss_pred ceEeec--------------------------CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCcc
Confidence 111111 1247899999999999999999999999999653 666666 665
Q ss_pred ---CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe-------EEEEe----ecCCCCeEEEEEecCCCCCCCCCCcccee
Q 009715 323 ---ALLCCAWSMDGKYILTGGEDDLVQVWSMEDRK-------VVAWG----EGHNSWVSGVAFDSYWSQPNSDGTAETVM 388 (528)
Q Consensus 323 ---~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~-------~~~~~----~~h~~~V~~v~f~p~~~~~~~dg~~~~~~ 388 (528)
.+.+++|||||++|++|+.||.|+|||++.++ .+.++ .+|..+|.+++|+| ||
T Consensus 128 ~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-------dg------ 194 (588)
T 2j04_A 128 SSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-------DV------ 194 (588)
T ss_dssp TTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-------TE------
T ss_pred ccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-------Cc------
Confidence 49999999999999999999999999999875 35666 57889999999999 74
Q ss_pred EEEEEEeCCCeEEEEEccCCeE---EEEee--cCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeec
Q 009715 389 YRFGSVGQDTRLLLWDLEMDEI---VVPLR--RGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRV 463 (528)
Q Consensus 389 ~~l~s~s~D~~i~lwd~~~~~~---~~~~~--~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~ 463 (528)
+++++.|++|++||+..++. ...+. +...+..++|+ + ..+..++ ++.+++||+...+......+
T Consensus 195 --Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g-------~~LASa~-~~tIkLWd~~~~~~~~~~~g 263 (588)
T 2j04_A 195 --LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-D-------YKVVLTC-PGYVHKIDLKNYSISSLKTG 263 (588)
T ss_dssp --EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-T-------TEEEEEC-SSEEEEEETTTTEEEEEECS
T ss_pred --EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-C-------CEEEEEe-CCeEEEEECCCCeEEEEEcC
Confidence 78899999999999987763 23342 11334455554 1 2233332 34555555555444222225
Q ss_pred CCCCeEEEEE--eCCe--EEEEECCCeEEEEe
Q 009715 464 HTEPLSGLIF--TQES--VLTVCREGHIKIWM 491 (528)
Q Consensus 464 h~~~V~~l~~--s~d~--l~t~s~Dg~i~iW~ 491 (528)
|.+.|.+++| +||+ |++++.||+ ++|.
T Consensus 264 h~~~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 264 SLENFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp CCSCCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 5555556666 5553 555555555 5553
No 115
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=1.3e-27 Score=233.29 Aligned_cols=262 Identities=18% Similarity=0.244 Sum_probs=210.3
Q ss_pred hhhhhhcCCCCCceeecc--CCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCCCCC-
Q 009715 88 SAAAKLLGTGNGSRTLGF--GGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD- 164 (528)
Q Consensus 88 ~~~~~~~~~~~g~~~~sf--~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~- 164 (528)
....++|++.+|.....+ .+|.+.|+++.|++ .+.++++++. ||.+.+|+......+..+..+...
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~-~~~~l~sgs~----------Dg~v~iw~~~~~~~~~~~~~h~~~~ 112 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTS----------SAEVQLWDVQQQKRLRNMTSHSARV 112 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSSCE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECC-CCCEEEEEEC----------CCcEEEeecCCceeEEEecCccceE
Confidence 356899999999866544 57888999999999 6667776664 899999998877666665554443
Q ss_pred ---CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcC
Q 009715 165 ---AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKS 241 (528)
Q Consensus 165 ---~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~ 241 (528)
+.++..|++|..++.+.+|+..... .... ....|...+.+++|.+++. +|++++.||.|++||+.
T Consensus 113 ~~~~~~~~~l~s~~~~~~~~~~~~~~~~-----~~~~------~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 113 GSLSWNSYILSSGSRSGHIHHHDVRVAE-----HHVA------TLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSA 180 (318)
T ss_dssp EEEEEETTEEEEEETTSEEEEEETTSSS-----CEEE------EEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESS
T ss_pred EEeecCCCEEEEEecCCceEeeecCCCc-----eeEE------EEcCccCceEEEEEcCCCC-EEEEEecCcceeEEECC
Confidence 6778899999999999999987521 1111 1123889999999999999 99999999999999997
Q ss_pred CCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCC-EE--EEEeCCCcEEEEecCCceEEeeec
Q 009715 242 KDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGT-YL--ATVGRDGYLRVFDYSKEQLICGGK 318 (528)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~-~l--~s~~~dg~i~vwd~~~~~~~~~~~ 318 (528)
+.... .........|.+.|.++.++|++. .+ ++++.++.|++||...........
T Consensus 181 ~~~~~----------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~ 238 (318)
T 4ggc_A 181 PGEGG----------------------WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD 238 (318)
T ss_dssp CBTTB----------------------SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE
T ss_pred CCccc----------------------ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc
Confidence 63211 123344455678999999999654 33 356688999999999888776654
Q ss_pred ccCCCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeC
Q 009715 319 SYYGALLCCAWSMDGKYILTGG--EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQ 396 (528)
Q Consensus 319 ~~~~~v~~l~~sp~g~~l~sg~--~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~ 396 (528)
+...+..+.|+|+++.+++++ .|+.|+|||+++++++..+.+|.+.|++++|+| || .+|+|++.
T Consensus 239 -~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~sp-------dg------~~l~S~s~ 304 (318)
T 4ggc_A 239 -AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP-------DG------ATVASAAA 304 (318)
T ss_dssp -CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-------TS------SCEEEEET
T ss_pred -ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-------CC------CEEEEEec
Confidence 677899999999999887754 799999999999999999999999999999999 99 68999999
Q ss_pred CCeEEEEEccCC
Q 009715 397 DTRLLLWDLEMD 408 (528)
Q Consensus 397 D~~i~lwd~~~~ 408 (528)
|++|+|||+...
T Consensus 305 D~~v~iWd~~~~ 316 (318)
T 4ggc_A 305 DETLRLWRCFEL 316 (318)
T ss_dssp TTEEEEECCSCC
T ss_pred CCeEEEEECCCC
Confidence 999999998754
No 116
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=3.8e-28 Score=245.53 Aligned_cols=241 Identities=12% Similarity=0.067 Sum_probs=167.5
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEee--------CCCcEEEEEeCCceEE
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVP--------GGDGAFVVGHADGNLY 236 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p--------~g~~~l~tg~~dg~v~ 236 (528)
.+++..|++|+.|++|++||++.... ...........|.+.|++++|+| +++ +||+|+.|++|+
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~-------~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~D~tv~ 169 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETI-------ITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-VIASVGDDCTLI 169 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEE-------EEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-EEEEEETTSEEE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCcc-------ceeeeecccCCCCCceEEEEEccccccccCCCCC-EEEEEECCCeEE
Confidence 56777899999999999999876211 11122233456999999999998 777 999999999999
Q ss_pred EEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC-CEEEEEeCCCcEEEEecCCceEEe
Q 009715 237 VYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG-TYLATVGRDGYLRVFDYSKEQLIC 315 (528)
Q Consensus 237 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg-~~l~s~~~dg~i~vwd~~~~~~~~ 315 (528)
|||+... .++.....|...|.+++|+|++ .+|++++.|+.|++||+.+++...
T Consensus 170 ~Wd~~~~--------------------------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~ 223 (393)
T 4gq1_A 170 IWRLTDE--------------------------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAE 223 (393)
T ss_dssp EEEEETT--------------------------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC---
T ss_pred EEECCCC--------------------------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccc
Confidence 9999752 3455566788999999999976 589999999999999998775432
Q ss_pred e-------------------------ecccCCCeEEEEEc-CCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEE
Q 009715 316 G-------------------------GKSYYGALLCCAWS-MDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGV 369 (528)
Q Consensus 316 ~-------------------------~~~~~~~v~~l~~s-p~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v 369 (528)
. ..+|...+.++.|+ |+++.|++++.|+.+++||+..++....+..|...+..+
T Consensus 224 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~ 303 (393)
T 4gq1_A 224 ENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPK 303 (393)
T ss_dssp -------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------
T ss_pred cccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccE
Confidence 2 13467788899987 799999999999999999999888777777777777666
Q ss_pred EEecCC-------------CCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCc
Q 009715 370 AFDSYW-------------SQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDN 436 (528)
Q Consensus 370 ~f~p~~-------------~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~ 436 (528)
.+.|.. ..|..++ .++++++.|++|++||+.+++.+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~sgs~Dg~V~lwd~~~~~~~~------------------------ 353 (393)
T 4gq1_A 304 NLLPNVQGISLFPSLLGACPHPRYMD------YFATAHSQHGLIQLINTYEKDSNS------------------------ 353 (393)
T ss_dssp CCSCSEEEECSSCCSSCCEECSSCTT------EEEEEETTTTEEEEEETTCTTCCE------------------------
T ss_pred EEccccccccccCcceeEEEccCCCC------EEEEEECCCCEEEEEECCCCcEEE------------------------
Confidence 665510 0011133 577888889999999987765432
Q ss_pred eeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCC
Q 009715 437 VCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRP 493 (528)
Q Consensus 437 ~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~ 493 (528)
.+..|..+|.+|+|+||+ |++++.|| +.+|.+.
T Consensus 354 -----------------------~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 354 -----------------------IPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp -----------------------EEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred -----------------------EecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 334578899999999986 88887655 6666543
No 117
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2e-27 Score=244.70 Aligned_cols=287 Identities=13% Similarity=-0.006 Sum_probs=208.7
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCC--CCCccccccc-------------cceeEEecc-----------
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGA--GDSSFPVIKD-------------QTQFSVAHP----------- 264 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~--~~~~~~~~~~-------------~~~~~~~~~----------- 264 (528)
.++++++|+|+|+ +|+++ .++.|++||+.++.. ....+..... .........
T Consensus 5 ~p~~~v~~s~dg~-~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSRDGS-LVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECSSSS-EEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecCCCC-EEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4789999999999 66665 578999999876330 1111110000 000000000
Q ss_pred -----CCCCCCCeEEEeecCCCeEEEEECCCCCEE-EEEeCCCcEEEEecC--CceEEeeec--ccCCCeEEEEEcCCCC
Q 009715 265 -----RYSKSNPIARWHICQGSINSIAFSTDGTYL-ATVGRDGYLRVFDYS--KEQLICGGK--SYYGALLCCAWSMDGK 334 (528)
Q Consensus 265 -----~~~~~~~~~~~~~h~~~v~~l~~spdg~~l-~s~~~dg~i~vwd~~--~~~~~~~~~--~~~~~v~~l~~sp~g~ 334 (528)
......+......|.+.|.+++|+|++++| ++++.|+.|++||+. +++.+..+. .|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 000001111233567789999999999996 889999999999999 888777765 5678899999999999
Q ss_pred EEEEEeCCCcEEEEECCCCeEEE----EeecCCCCeEEEEEecCCCCCCCC---CCccceeEEEEEEeCCCeEEEEEccC
Q 009715 335 YILTGGEDDLVQVWSMEDRKVVA----WGEGHNSWVSGVAFDSYWSQPNSD---GTAETVMYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 335 ~l~sg~~dg~v~vwd~~~~~~~~----~~~~h~~~V~~v~f~p~~~~~~~d---g~~~~~~~~l~s~s~D~~i~lwd~~~ 407 (528)
+|++++.|+.|++|++.+++... .+.+|...|++++|+| + + .+|++++.|+.|++||+++
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-------~~~~~------~~l~s~~~d~~i~vwd~~~ 229 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIK-------DSDGH------QFIITSDRDEHIKISHYPQ 229 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEE-------CTTSC------EEEEEEETTSCEEEEEESC
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcC-------CCCCC------cEEEEEcCCCcEEEEECCC
Confidence 99999999999999998876543 7788999999999999 8 8 7999999999999999999
Q ss_pred CeEEEEee--cCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecC---------------------
Q 009715 408 DEIVVPLR--RGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVH--------------------- 464 (528)
Q Consensus 408 ~~~~~~~~--~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h--------------------- 464 (528)
++++..+. +...+..+.|+ ++ ..+..++.++.+++||+.+.+.+..+..+
T Consensus 230 ~~~~~~~~~~h~~~v~~~~~s-d~------~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (450)
T 2vdu_B 230 CFIVDKWLFGHKHFVSSICCG-KD------YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNEN 302 (450)
T ss_dssp TTCEEEECCCCSSCEEEEEEC-ST------TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC--------
T ss_pred CceeeeeecCCCCceEEEEEC-CC------CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccc
Confidence 98877743 33456677777 54 56778889999999999999888877632
Q ss_pred ----CCCeEEEEEeCCe--EEEEE-CCCeEEEEeC--CCC---cc--ccCCCccce--EEEccCCceEEEee
Q 009715 465 ----TEPLSGLIFTQES--VLTVC-REGHIKIWMR--PGV---AE--SQSSSSETV--LSTSSKDKPLLSSK 520 (528)
Q Consensus 465 ----~~~V~~l~~s~d~--l~t~s-~Dg~i~iW~~--~~~---~~--~~~~~~~~v--l~~spd~~~l~s~~ 520 (528)
...|.+++|+|++ |++++ .|+.|++|++ ..+ .. ....+ ..+ ++|+|++.+++.++
T Consensus 303 ~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 303 NDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp --CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECC
T ss_pred cccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEec
Confidence 3579999999974 88888 8999999999 443 11 11233 455 88899654444433
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.4e-26 Score=236.67 Aligned_cols=281 Identities=9% Similarity=0.033 Sum_probs=219.7
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
++++..++++..++.|++||+.+.. .. ... .......|...|.+++|+|++. ++++++.|+.|++||+..
T Consensus 131 s~~~~~~~~~~~~~~i~~~d~~~g~-----~~-~~~-~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~v~~~d~~~-- 200 (433)
T 3bws_A 131 IDNTRLAIPLLEDEGMDVLDINSGQ-----TV-RLS-PPEKYKKKLGFVETISIPEHNE-LWVSQMQANAVHVFDLKT-- 200 (433)
T ss_dssp SSSSEEEEEBTTSSSEEEEETTTCC-----EE-EEC-CCHHHHTTCCEEEEEEEGGGTE-EEEEEGGGTEEEEEETTT--
T ss_pred eCCCeEEEEeCCCCeEEEEECCCCe-----Ee-eec-CcccccccCCceeEEEEcCCCE-EEEEECCCCEEEEEECCC--
Confidence 6766677777788899999987621 11 000 0001224888999999999998 999999999999999875
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEe-CCCcEEEEecCCceEEeeecccCCC
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVG-RDGYLRVFDYSKEQLICGGKSYYGA 323 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~ 323 (528)
...+..+..|...+.+++|+|+++++++++ .|+.|++||+++++.+..+.. ...
T Consensus 201 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~ 255 (433)
T 3bws_A 201 ------------------------LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGL 255 (433)
T ss_dssp ------------------------CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSE
T ss_pred ------------------------ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCC
Confidence 234556667788999999999999886554 799999999999998887765 456
Q ss_pred eEEEEEcCCCCEEEEEe--------CCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe
Q 009715 324 LLCCAWSMDGKYILTGG--------EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG 395 (528)
Q Consensus 324 v~~l~~sp~g~~l~sg~--------~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s 395 (528)
+.+++|+|++++|++++ .|+.|++||+++++.+..+. |...+.+++|+| +|+ .++++++
T Consensus 256 ~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~-------~g~-----~l~~~~~ 322 (433)
T 3bws_A 256 PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGN-------TEN-----KIYVSDM 322 (433)
T ss_dssp EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECS-------STT-----EEEEEET
T ss_pred ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECC-------CCC-----EEEEEec
Confidence 89999999999999887 58899999999998877664 677899999999 873 4677889
Q ss_pred CCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCc---cC------CceeeeecCCCCceeeecCCCCceEEeecCCC
Q 009715 396 QDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSA---HW------DNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTE 466 (528)
Q Consensus 396 ~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~---~~------d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~ 466 (528)
.|+.|++||+.+++.+..+........++|++++... .. ...+..+..++.+.+||..+.+.+..+.. ..
T Consensus 323 ~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~ 401 (433)
T 3bws_A 323 CCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GN 401 (433)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SS
T ss_pred CCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CC
Confidence 9999999999999998888876667778888877410 00 11123334467899999999888887776 45
Q ss_pred CeEEEEEeCCe--EEEEE-CCCeEEEEeCCC
Q 009715 467 PLSGLIFTQES--VLTVC-REGHIKIWMRPG 494 (528)
Q Consensus 467 ~V~~l~~s~d~--l~t~s-~Dg~i~iW~~~~ 494 (528)
.+.+++|+|++ |++++ .|+.|++|++..
T Consensus 402 ~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 402 QPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 78999999985 77776 499999999863
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=5.8e-26 Score=228.76 Aligned_cols=325 Identities=14% Similarity=0.127 Sum_probs=239.7
Q ss_pred eeeCCCccEEEEeCCCcEEEEeCCCCCCC-----CCCCCeE-EEEecCCcEEEEEccccccccccceeeeeeeccCCccc
Q 009715 136 TNFDGKGTYIIFNVGDAIFISDLNSQDKD-----AKDGHDL-LIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVN 209 (528)
Q Consensus 136 ~~~~~~g~~~~~~~~~~i~v~~~~~~~~~-----~~~~~~l-~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h 209 (528)
++...++.+.+|+......+..+..+... +++++.| +++..++.|++||+.+.. . ..... +
T Consensus 6 vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~-----~-~~~~~-------~ 72 (391)
T 1l0q_A 6 IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN-----V-IATVP-------A 72 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE-----E-EEEEE-------C
T ss_pred EEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCe-----E-EEEEE-------C
Confidence 33445888999988766555444433322 8899887 566689999999997621 1 11111 3
Q ss_pred CCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC
Q 009715 210 NSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST 289 (528)
Q Consensus 210 ~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 289 (528)
...+.+++|+|+++.+++++..|+.|++||+... +.+..+. +...+.+++|+|
T Consensus 73 ~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~--------------------------~~~~~~~-~~~~~~~~~~s~ 125 (391)
T 1l0q_A 73 GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN--------------------------TVAGTVK-TGKSPLGLALSP 125 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--------------------------EEEEEEE-CSSSEEEEEECT
T ss_pred CCCccceEECCCCCEEEEEECCCCEEEEEECCCC--------------------------eEEEEEe-CCCCcceEEECC
Confidence 3489999999999944456667899999998752 1222223 235789999999
Q ss_pred CCCEE-EEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCeEEEEeecCCCCeE
Q 009715 290 DGTYL-ATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYI-LTGGEDDLVQVWSMEDRKVVAWGEGHNSWVS 367 (528)
Q Consensus 290 dg~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l-~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~ 367 (528)
++++| ++++.|+.|++||+.+++.+..+..+ ..+.+++|+|++++| ++++.|+.|++||+++++++..+. +...+.
T Consensus 126 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~ 203 (391)
T 1l0q_A 126 DGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPS 203 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEE
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCcc
Confidence 99977 67778999999999999988887754 557999999999987 577789999999999998888776 667899
Q ss_pred EEEEecCCCCCCCCCCccceeEEEEEEe---CCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCC
Q 009715 368 GVAFDSYWSQPNSDGTAETVMYRFGSVG---QDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQ 444 (528)
Q Consensus 368 ~v~f~p~~~~~~~dg~~~~~~~~l~s~s---~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~ 444 (528)
+++|+| +| .+|++++ .|+.|++||+++++.+..+........+.+++++. ..+..+..+
T Consensus 204 ~~~~~~-------~g------~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~-----~l~~s~~~d 265 (391)
T 1l0q_A 204 GIAVNP-------EG------TKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGK-----KVYVALSFX 265 (391)
T ss_dssp EEEECT-------TS------SEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSS-----EEEEEETTT
T ss_pred ceEECC-------CC------CEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCC-----EEEEEcCCC
Confidence 999999 88 5666666 68999999999999988887766556677877762 222455778
Q ss_pred CCceeeecCCCCceEEeecCCCCeE---EEE------------EeCC------------eEEEEECCCeEEEEeCCCCcc
Q 009715 445 PAPSMRDVPKLSPLVAHRVHTEPLS---GLI------------FTQE------------SVLTVCREGHIKIWMRPGVAE 497 (528)
Q Consensus 445 ~~~~~~d~~~~~~~~~~~~h~~~V~---~l~------------~s~d------------~l~t~s~Dg~i~iW~~~~~~~ 497 (528)
+.+++||+...+.+..+..|..+.. .+. |+.+ .+...+.|..+++|++..+..
T Consensus 266 ~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~ 345 (391)
T 1l0q_A 266 NTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSS 345 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCE
T ss_pred CEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCcc
Confidence 8899999999888888877655421 012 2211 155666789999999976653
Q ss_pred ccCCCccceEEEccCCceEEEeeee
Q 009715 498 SQSSSSETVLSTSSKDKPLLSSKVV 522 (528)
Q Consensus 498 ~~~~~~~~vl~~spd~~~l~s~~~~ 522 (528)
. .+......++++|.|.++-.+.
T Consensus 346 ~--~~~~~~~~~~~~g~y~~~~~~~ 368 (391)
T 1l0q_A 346 S--KKQNPTHTYSETGIYTVRLTVS 368 (391)
T ss_dssp E--CSSSCEECCSSCEEEEEEEEEE
T ss_pred c--CcCCCeEEeCCCceEEEEEEEE
Confidence 2 3344557889999998876544
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=3.9e-27 Score=234.74 Aligned_cols=253 Identities=9% Similarity=0.105 Sum_probs=191.0
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
++++..|++|..+| +++||+... +... .. +...+..++|.++++.++++++.|++|++||..++
T Consensus 28 s~dg~~la~g~~~~-~~iw~~~~~-----~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~- 91 (355)
T 3vu4_A 28 NQDQSCLILSTLKS-FEIYNVHPV-----AHIM-----SQ----EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK- 91 (355)
T ss_dssp CTTSSEEEEECSSE-EEEEEETTE-----EEEE-----EE----ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTT-
T ss_pred CCCCCEEEEEcCCE-EEEEecCCc-----ceee-----ee----ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCC-
Confidence 68999999998775 789998751 1111 00 22258889999988844467888999999998752
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCc-eEEeeecccCCC
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKE-QLICGGKSYYGA 323 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~ 323 (528)
..+..+. |...|.+++|+++. ++++ .|+.|++||+.++ +.+..+.. .
T Consensus 92 -------------------------~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~ 139 (355)
T 3vu4_A 92 -------------------------QDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---F 139 (355)
T ss_dssp -------------------------EEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---E
T ss_pred -------------------------cEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---C
Confidence 2233333 45789999998874 4444 4789999999988 66655554 4
Q ss_pred eEEEEEcCCCCEEEE--EeCCCcEEEEECCCCe----------------EEEEeecCCCCeEEEEEecCCCCCCCCCCcc
Q 009715 324 LLCCAWSMDGKYILT--GGEDDLVQVWSMEDRK----------------VVAWGEGHNSWVSGVAFDSYWSQPNSDGTAE 385 (528)
Q Consensus 324 v~~l~~sp~g~~l~s--g~~dg~v~vwd~~~~~----------------~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~ 385 (528)
...+++++ .+++. |+.||.|++||+++++ ++..+.+|...|++++|+| ||
T Consensus 140 ~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-------~g--- 207 (355)
T 3vu4_A 140 GGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-------KS--- 207 (355)
T ss_dssp EEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-------TS---
T ss_pred CceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-------CC---
Confidence 44566777 56666 5789999999999865 2678889999999999999 99
Q ss_pred ceeEEEEEEeCCCe-EEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeec-
Q 009715 386 TVMYRFGSVGQDTR-LLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRV- 463 (528)
Q Consensus 386 ~~~~~l~s~s~D~~-i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~- 463 (528)
.+|++++.|++ |++||+++++++..+.. +
T Consensus 208 ---~~l~s~s~d~~~v~iwd~~~~~~~~~~~~----------------------------------------------g~ 238 (355)
T 3vu4_A 208 ---DMVATCSQDGTIIRVFKTEDGVLVREFRR----------------------------------------------GL 238 (355)
T ss_dssp ---SEEEEEETTCSEEEEEETTTCCEEEEEEC----------------------------------------------TT
T ss_pred ---CEEEEEeCCCCEEEEEECCCCcEEEEEEc----------------------------------------------CC
Confidence 79999999998 99999998887765542 3
Q ss_pred CCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCccccC---------------------------CCccceEEEccCCc
Q 009715 464 HTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAESQS---------------------------SSSETVLSTSSKDK 514 (528)
Q Consensus 464 h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~~~---------------------------~~~~~vl~~spd~~ 514 (528)
|...|.+++|+|++ |++++.|++|++||+........ .....++++++|++
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~ 318 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS 318 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE
T ss_pred CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC
Confidence 88999999999974 99999999999999875431100 01125699999999
Q ss_pred eEEEeeeecccc
Q 009715 515 PLLSSKVVTSSY 526 (528)
Q Consensus 515 ~l~s~~~~gs~~ 526 (528)
+|+++..+|..+
T Consensus 319 ~l~~~~~dg~~~ 330 (355)
T 3vu4_A 319 LVVVWPHTRMIE 330 (355)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEEeCCCeEE
Confidence 999998887654
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=2.1e-26 Score=232.02 Aligned_cols=268 Identities=16% Similarity=0.139 Sum_probs=211.2
Q ss_pred CeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCC
Q 009715 169 HDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDS 248 (528)
Q Consensus 169 ~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~ 248 (528)
..++++..+|.|++||+.+.. . ..... +...+.+++|+|+++.++++++.|+.|++||+.+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~-----~-~~~~~-------~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~----- 64 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNK-----V-TATIP-------VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN----- 64 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTE-----E-EEEEE-------CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT-----
T ss_pred EEEEEcCCCCEEEEEECCCCe-----E-EEEee-------cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCC-----
Confidence 456788899999999997621 1 11111 33458999999999944577889999999998752
Q ss_pred ccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEe-CCCcEEEEecCCceEEeeecccCCCeEEE
Q 009715 249 SFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVG-RDGYLRVFDYSKEQLICGGKSYYGALLCC 327 (528)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 327 (528)
+.+..+..+ ..+.+++|+|++++|++++ .++.|++||+.+++.+..+.. ...+.++
T Consensus 65 ---------------------~~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~ 121 (391)
T 1l0q_A 65 ---------------------NVIATVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGL 121 (391)
T ss_dssp ---------------------EEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEE
T ss_pred ---------------------eEEEEEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceE
Confidence 223334434 3899999999999886554 679999999999998887764 4568999
Q ss_pred EEcCCCCEE-EEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc
Q 009715 328 AWSMDGKYI-LTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 406 (528)
Q Consensus 328 ~~sp~g~~l-~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~ 406 (528)
+|+|++++| ++++.|+.|++||+++++.+..+..| ..+.+++|+| +|+ .++++++.|+.|++||++
T Consensus 122 ~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~-------dg~-----~l~~~~~~~~~v~~~d~~ 188 (391)
T 1l0q_A 122 ALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTP-------DGT-----KVYVANFDSMSISVIDTV 188 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECT-------TSS-----EEEEEETTTTEEEEEETT
T ss_pred EECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECC-------CCC-----EEEEEeCCCCEEEEEECC
Confidence 999999977 67888999999999999998888755 5579999999 883 344788899999999999
Q ss_pred CCeEEEEeecCCCCCCCeecCCCCCccCCceeeeec---CCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--E-EE
Q 009715 407 MDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGT---LQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--V-LT 480 (528)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~---~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l-~t 480 (528)
+++.+..+........+.|++++ ..+.++. .++.+.+||+...+++..+..|. .+.+++|+|++ | ++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~g------~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s 261 (391)
T 1l0q_A 189 TNSVIDTVKVEAAPSGIAVNPEG------TKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVA 261 (391)
T ss_dssp TTEEEEEEECSSEEEEEEECTTS------SEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEE
T ss_pred CCeEEEEEecCCCccceEECCCC------CEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEE
Confidence 99998888776566677787776 3344444 57889999999998888888765 47899999985 5 67
Q ss_pred EECCCeEEEEeCCCCcc
Q 009715 481 VCREGHIKIWMRPGVAE 497 (528)
Q Consensus 481 ~s~Dg~i~iW~~~~~~~ 497 (528)
++.|+.|++||+..++.
T Consensus 262 ~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 262 LSFXNTVSVIDTATNTI 278 (391)
T ss_dssp ETTTTEEEEEETTTTEE
T ss_pred cCCCCEEEEEECCCCcE
Confidence 78999999999987653
No 122
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.8e-27 Score=243.49 Aligned_cols=256 Identities=13% Similarity=0.205 Sum_probs=197.9
Q ss_pred eccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCC----------c--EEEEeCCCCCCC----CC
Q 009715 103 LGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGD----------A--IFISDLNSQDKD----AK 166 (528)
Q Consensus 103 ~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~----------~--i~v~~~~~~~~~----~~ 166 (528)
....+|.+.|+++.|+|..+.++++++. +|.+.+|+... . +........... ++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~----------dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~ 191 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTP----------SSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNP 191 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECS----------SSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECT
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECC----------CCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCC
Confidence 4556999999999999944556666554 78888888654 1 222222211111 77
Q ss_pred CCC-eEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCC
Q 009715 167 DGH-DLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGA 245 (528)
Q Consensus 167 ~~~-~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~ 245 (528)
++. .|++|+.+|.|++||+...... ..... .......|...|.+++|+|++..+|++++.||.|++||++....
T Consensus 192 ~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~----~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 192 NLNGYLLSASDDHTICLWDINATPKE-HRVID----AKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT 266 (430)
T ss_dssp TSTTEEEEECTTSCEEEEETTSCCBG-GGEEE----CSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS
T ss_pred CCCCeEEEEeCCCeEEEEeCCCCCCC-Cceec----cceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC
Confidence 777 9999999999999999862110 00000 01112248899999999996555999999999999999986321
Q ss_pred CCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCC-EEEEEeCCCcEEEEecCC-ceEEeeecccCCC
Q 009715 246 GDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGT-YLATVGRDGYLRVFDYSK-EQLICGGKSYYGA 323 (528)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~-~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~ 323 (528)
..++..+..|...|++++|+|++. +|++++.||.|++||+++ .+.+..+..|...
T Consensus 267 -----------------------~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~ 323 (430)
T 2xyi_A 267 -----------------------SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 323 (430)
T ss_dssp -----------------------SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSC
T ss_pred -----------------------CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCC
Confidence 235566678899999999999886 789999999999999997 5667778889999
Q ss_pred eEEEEEcCCCC-EEEEEeCCCcEEEEECCC--------------CeEEEEeecCCCCeEEEEEecCCCCCCCCCCcccee
Q 009715 324 LLCCAWSMDGK-YILTGGEDDLVQVWSMED--------------RKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVM 388 (528)
Q Consensus 324 v~~l~~sp~g~-~l~sg~~dg~v~vwd~~~--------------~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~ 388 (528)
|.+++|+|+++ +|++++.|+.|+|||+.. .+.+..+.+|...|.+++|+| +++
T Consensus 324 v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-------~~~----- 391 (430)
T 2xyi_A 324 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP-------NEP----- 391 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECS-------SST-----
T ss_pred EEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECC-------CCC-----
Confidence 99999999985 799999999999999987 367778889999999999999 871
Q ss_pred EEEEEEeCCCeEEEEEccCC
Q 009715 389 YRFGSVGQDTRLLLWDLEMD 408 (528)
Q Consensus 389 ~~l~s~s~D~~i~lwd~~~~ 408 (528)
.+|++++.|+.|++|++...
T Consensus 392 ~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 392 WIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp TEEEEEETTSEEEEEEECHH
T ss_pred CEEEEEECCCCEEEeEcccc
Confidence 28999999999999998754
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-26 Score=230.17 Aligned_cols=225 Identities=11% Similarity=0.074 Sum_probs=163.2
Q ss_pred eeCCCccEEEEeCCCcEEEEeCCCCCCC----CCCCCeEEEEecCCcEEEEEcccccc--ccccceeeeeeeccCCcccC
Q 009715 137 NFDGKGTYIIFNVGDAIFISDLNSQDKD----AKDGHDLLIGLNSGDVYSVSLRQQLQ--DVGKKLVGAHHYNKDGSVNN 210 (528)
Q Consensus 137 ~~~~~g~~~~~~~~~~i~v~~~~~~~~~----~~~~~~l~~g~~~G~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~h~ 210 (528)
+.+.||.+.+|+......+..+...... +++ +++++.|+.|++|+...... +...... +......|.
T Consensus 53 sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~----~~~~~~~~~ 125 (343)
T 3lrv_A 53 CRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKV----LREIEVDSA 125 (343)
T ss_dssp EEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCE----EEEEECCCS
T ss_pred EECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcce----eEEeecCCC
Confidence 3334888888886554222222111111 444 99999999999998875321 1000000 001111266
Q ss_pred CceeEEEEee--CCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEE-eecCCCeEEEEE
Q 009715 211 SRCTSVTWVP--GGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARW-HICQGSINSIAF 287 (528)
Q Consensus 211 ~~v~~l~~~p--~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~ 287 (528)
.+|.+++|+| +++ +|++++.||+|++||++... .+... ..|...|.+++|
T Consensus 126 ~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~~--------------------------~~~~~~~~~~~~i~~~~~ 178 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDDS--------------------------QYIVHSAKSDVEYSSGVL 178 (343)
T ss_dssp SCEEEEECCC---CC-EEEEEETTCCEEEEESSSSC--------------------------EEEEECCCSSCCCCEEEE
T ss_pred CCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCCc--------------------------EEEEEecCCCCceEEEEE
Confidence 8899999999 998 99999999999999998521 12222 123467999999
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCceEE-eeecc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec---C
Q 009715 288 STDGTYLATVGRDGYLRVFDYSKEQLI-CGGKS-YYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEG---H 362 (528)
Q Consensus 288 spdg~~l~s~~~dg~i~vwd~~~~~~~-~~~~~-~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~---h 362 (528)
+|++.+|++|+.||.|++||+++++.+ ..+.. |.+.|.+++|+|++.+|++++ |+.|++||+++++.+..+.. |
T Consensus 179 ~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~ 257 (343)
T 3lrv_A 179 HKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIP 257 (343)
T ss_dssp CTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-
T ss_pred CCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccc
Confidence 999999999999999999999998877 67777 999999999999999999999 55999999999877655543 4
Q ss_pred CCCeE--EEEEecCCCCCCCCCCccceeEEEEEEeC-CCeEEEEEccCCe
Q 009715 363 NSWVS--GVAFDSYWSQPNSDGTAETVMYRFGSVGQ-DTRLLLWDLEMDE 409 (528)
Q Consensus 363 ~~~V~--~v~f~p~~~~~~~dg~~~~~~~~l~s~s~-D~~i~lwd~~~~~ 409 (528)
...+. +++|+| +| .+|++++. |+.|++|++....
T Consensus 258 ~~~~~~~~~~~~~-------~g------~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 258 EFKTGTVTYDIDD-------SG------KNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp ----CCEEEEECT-------TS------SEEEEEETTTTEEEEEEECTTT
T ss_pred cccccceEEEECC-------CC------CEEEEecCCCCcEEEEEEcccc
Confidence 44454 699999 98 68999888 9999999986543
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=2.1e-26 Score=221.33 Aligned_cols=257 Identities=10% Similarity=0.032 Sum_probs=189.2
Q ss_pred hhhhhhcCCCCC---ceeeccCCCCCCCccccCCcccCCcccCCCC----CCcceeeeCCC----ccEEEEeCCCcEEEE
Q 009715 88 SAAAKLLGTGNG---SRTLGFGGGNGGSKSISGSSRIGSLGASSSS----TSMTNTNFDGK----GTYIIFNVGDAIFIS 156 (528)
Q Consensus 88 ~~~~~~~~~~~g---~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~----~s~~~~~~~~~----g~~~~~~~~~~i~v~ 156 (528)
-.+.++|....+ ..++++.+|...|..|.+.|..-+++.-.-. .....+.++++ +.+++- .++.+.+|
T Consensus 62 ~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s-~g~~~~v~ 140 (356)
T 2w18_A 62 EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLK-SGNIKAVL 140 (356)
T ss_dssp SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEE-EEEEEEEE
T ss_pred cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEe-CCCeEEEE
Confidence 467899999999 8899999999999999999844444332221 13335566777 666665 34567788
Q ss_pred eCCCCCCCCCCCCeEEEEe--cCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEee---CCCcEEEEEeC
Q 009715 157 DLNSQDKDAKDGHDLLIGL--NSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVP---GGDGAFVVGHA 231 (528)
Q Consensus 157 ~~~~~~~~~~~~~~l~~g~--~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p---~g~~~l~tg~~ 231 (528)
++. +++.+.++. .++.|++|++... ++.+. ....|...++.++|+| +++ +|++++.
T Consensus 141 ~l~-------~g~lv~ss~~g~d~~V~~~~~s~d----G~~~~-------s~~~~~~~v~~l~fs~~~g~~~-~LaSgS~ 201 (356)
T 2w18_A 141 GLT-------KRRLVSSSGTLSDQQVEVMTFAED----GGGKE-------NQFLMPPEETILTFAEVQGMQE-ALLGTTI 201 (356)
T ss_dssp EET-------TTEEEEEESSSTTCEEEEEEECTT----SCEEE-------EEEECCCSSCEEEEEEEETSTT-EEEEEET
T ss_pred ecC-------CCcEEEecccCCCCcEEEEEECCC----Cceee-------eeccCCCceeeEEeeccCCCCc-eEEEecC
Confidence 763 344455533 5999999999541 11111 1113888999999999 667 9999999
Q ss_pred CceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecC---CCeEEEEECCCCCEE------------EE
Q 009715 232 DGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQ---GSINSIAFSTDGTYL------------AT 296 (528)
Q Consensus 232 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~l~~spdg~~l------------~s 296 (528)
|++|+|||+.++ +.++.+.+|. ..+.+++|+|+|.++ ++
T Consensus 202 D~TIkIWDl~TG--------------------------k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laS 255 (356)
T 2w18_A 202 MNNIVIWNLKTG--------------------------QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESL 255 (356)
T ss_dssp TSEEEEEETTTC--------------------------CEEEEEECCC---CCCEEEEEEETTEEEEEEC----------
T ss_pred CCcEEEEECCCC--------------------------cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeec
Confidence 999999999862 3445555432 467888999999876 56
Q ss_pred EeCCCcEEEEecCCceEEeee-----cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeE-EEE
Q 009715 297 VGRDGYLRVFDYSKEQLICGG-----KSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVS-GVA 370 (528)
Q Consensus 297 ~~~dg~i~vwd~~~~~~~~~~-----~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~-~v~ 370 (528)
|+.|++|++||..+++.+..+ .+|...+.+..++ +.++++++.|++|+|||+.+++++.++.+|...+. .++
T Consensus 256 Gs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~va 333 (356)
T 2w18_A 256 RSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVK 333 (356)
T ss_dssp --CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEE
T ss_pred cCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEE
Confidence 788999999999999987654 3566665544444 88999999999999999999999999999987665 689
Q ss_pred EecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEc
Q 009715 371 FDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDL 405 (528)
Q Consensus 371 f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~ 405 (528)
|+| || .+|++|+.|++|+|||+
T Consensus 334 fSP-------DG------~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 334 WSG-------TD------SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ECS-------SS------SEEEEECTTSCEEEEEE
T ss_pred ECC-------CC------CEEEEEECCCcEEEecC
Confidence 999 99 79999999999999996
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1.3e-25 Score=215.85 Aligned_cols=188 Identities=11% Similarity=0.064 Sum_probs=144.1
Q ss_pred CCCCEEEEEe--CCCcEEEEec-CCceEEeeecccCCCeEEEEEcC---CCCEEEEEeCCCcEEEEECCCCeEEEEeecC
Q 009715 289 TDGTYLATVG--RDGYLRVFDY-SKEQLICGGKSYYGALLCCAWSM---DGKYILTGGEDDLVQVWSMEDRKVVAWGEGH 362 (528)
Q Consensus 289 pdg~~l~s~~--~dg~i~vwd~-~~~~~~~~~~~~~~~v~~l~~sp---~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h 362 (528)
++++++.++. .|+.|++|++ .+++.+..+..|...+..++|+| ++.+|++++.|++|+|||++++++++++.+|
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~ 222 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID 222 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC
Confidence 4555555543 5999999999 45888888889999999999999 7799999999999999999999999999875
Q ss_pred C---CCeEEEEEecCCCCCCCCCCccceeEEE------------EEEeCCCeEEEEEccCCeEEEEeecC-CCCCCCeec
Q 009715 363 N---SWVSGVAFDSYWSQPNSDGTAETVMYRF------------GSVGQDTRLLLWDLEMDEIVVPLRRG-PLGGSPTFS 426 (528)
Q Consensus 363 ~---~~V~~v~f~p~~~~~~~dg~~~~~~~~l------------~s~s~D~~i~lwd~~~~~~~~~~~~~-~~~~~~~~s 426 (528)
. ..|.+++|+| || .++ ++|+.|++|++||..+++.+..+... +......+.
T Consensus 223 ~~~v~~v~~vafSp-------dG------~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~l 289 (356)
T 2w18_A 223 DSYQASVCHKAYSE-------MG------LLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFL 289 (356)
T ss_dssp C---CCCEEEEEEE-------TT------EEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEE
T ss_pred CcceeeeEEEEECC-------CC------CEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeE
Confidence 4 3677889999 88 443 67889999999999999987765321 111111111
Q ss_pred CCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeE-EEEEeCCe--EEEEECCCeEEEEeC
Q 009715 427 TGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLS-GLIFTQES--VLTVCREGHIKIWMR 492 (528)
Q Consensus 427 ~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~-~l~~s~d~--l~t~s~Dg~i~iW~~ 492 (528)
... .....+..++.++.+++||+.+.+.+.++.+|...+. .++|+||+ |++|+.|++|||||+
T Consensus 290 sg~---~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 290 EGD---VKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEE---EETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred ccc---cCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 000 0023467788899999999999999999999988655 58999984 999999999999996
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=7.1e-26 Score=231.37 Aligned_cols=274 Identities=9% Similarity=0.054 Sum_probs=213.6
Q ss_pred CCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC
Q 009715 210 NSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST 289 (528)
Q Consensus 210 ~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 289 (528)
...+.+++|+|++. ++++++.|+.|++||+.+... .... +...+..|.+.|.+++|++
T Consensus 122 ~~~~~~~~~s~~~~-~~~~~~~~~~i~~~d~~~g~~-~~~~--------------------~~~~~~~~~~~v~~~~~~~ 179 (433)
T 3bws_A 122 GFQPKSVRFIDNTR-LAIPLLEDEGMDVLDINSGQT-VRLS--------------------PPEKYKKKLGFVETISIPE 179 (433)
T ss_dssp SSCBCCCEESSSSE-EEEEBTTSSSEEEEETTTCCE-EEEC--------------------CCHHHHTTCCEEEEEEEGG
T ss_pred CCCceEEEEeCCCe-EEEEeCCCCeEEEEECCCCeE-eeec--------------------CcccccccCCceeEEEEcC
Confidence 34567999999665 888888899999999875321 0000 0112345778999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEE-EeCCCcEEEEECCCCeEEEEeecCCCCeEE
Q 009715 290 DGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT-GGEDDLVQVWSMEDRKVVAWGEGHNSWVSG 368 (528)
Q Consensus 290 dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~s-g~~dg~v~vwd~~~~~~~~~~~~h~~~V~~ 368 (528)
++.++++++.|+.|++||+++++.+..+..|...+.+++|+|+++++++ ++.|+.|++||+++++.+..+..+ ..+.+
T Consensus 180 ~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~ 258 (433)
T 3bws_A 180 HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRG 258 (433)
T ss_dssp GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceE
Confidence 9999999999999999999999998888888899999999999998854 557999999999999998888754 45999
Q ss_pred EEEecCCCCCCCCCCccceeEEEEEEe--------CCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeee
Q 009715 369 VAFDSYWSQPNSDGTAETVMYRFGSVG--------QDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPV 440 (528)
Q Consensus 369 v~f~p~~~~~~~dg~~~~~~~~l~s~s--------~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~ 440 (528)
++|+| +| .+|++++ .|+.|++||+++++.+..+........+.|++++. ..+..
T Consensus 259 ~~~~~-------~g------~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~-----~l~~~ 320 (433)
T 3bws_A 259 LLLSK-------DG------KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTEN-----KIYVS 320 (433)
T ss_dssp EEECT-------TS------SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTT-----EEEEE
T ss_pred EEEcC-------CC------CEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCC-----EEEEE
Confidence 99999 88 5777776 58899999999998887775544555677777652 23455
Q ss_pred ecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEEC---------------CCeEEEEeCCCCccccC-CC
Q 009715 441 GTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCR---------------EGHIKIWMRPGVAESQS-SS 502 (528)
Q Consensus 441 g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~---------------Dg~i~iW~~~~~~~~~~-~~ 502 (528)
+..++.+.+||+...+.+..+. +...+.+++|+|++ |++++. ||.|++||+.+++.... ..
T Consensus 321 ~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~ 399 (433)
T 3bws_A 321 DMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA 399 (433)
T ss_dssp ETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC
T ss_pred ecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC
Confidence 6778899999999887777665 77889999999985 777765 57999999987663322 22
Q ss_pred ccce--EEEccCCceEEEeee-eccc
Q 009715 503 SETV--LSTSSKDKPLLSSKV-VTSS 525 (528)
Q Consensus 503 ~~~v--l~~spd~~~l~s~~~-~gs~ 525 (528)
...+ ++++|||++|++++. ++.+
T Consensus 400 ~~~~~~~~~s~dg~~l~~~~~~d~~i 425 (433)
T 3bws_A 400 GNQPTGLDVSPDNRYLVISDFLDHQI 425 (433)
T ss_dssp SSSEEEEEECTTSCEEEEEETTTTEE
T ss_pred CCCCceEEEcCCCCEEEEEECCCCeE
Confidence 2334 889999999988764 4543
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=2.2e-23 Score=212.07 Aligned_cols=286 Identities=12% Similarity=0.022 Sum_probs=204.4
Q ss_pred CeEEEEe----cCC----cEEEEEc--cccccccccceeeeeeeccCCcccCCceeEEEEee--------------CCCc
Q 009715 169 HDLLIGL----NSG----DVYSVSL--RQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVP--------------GGDG 224 (528)
Q Consensus 169 ~~l~~g~----~~G----~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p--------------~g~~ 224 (528)
..+++|. .+| .|++||+ .+. +.+. ......|...+..+++.+ .+.
T Consensus 76 ~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~- 144 (415)
T 2hqs_A 76 DAVVVGQVTPNPDGSYNVAYQLVDTGGAPG-----TVLA-----QNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRT- 144 (415)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEECSSSTT-----CEEE-----EEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTC-
T ss_pred CEEEEEEEEECCCCeEEEEEEEEeCCCCCC-----CEEe-----eeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCC-
Confidence 3455665 467 8999999 552 1111 111123666677676664 144
Q ss_pred EEEEEeCC------ceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEe
Q 009715 225 AFVVGHAD------GNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVG 298 (528)
Q Consensus 225 ~l~tg~~d------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~ 298 (528)
.++.++.+ +.|++||+.. ...+.+..|...|.+++|+|||++|++++
T Consensus 145 ~l~~~s~~~~~~~~~~i~i~d~~g---------------------------~~~~~l~~~~~~v~~~~~Spdg~~la~~s 197 (415)
T 2hqs_A 145 RIAYVVQTNGGQFPYELRVSDYDG---------------------------YNQFVVHRSPQPLMSPAWSPDGSKLAYVT 197 (415)
T ss_dssp EEEEEEECSSSSCCEEEEEEETTS---------------------------CSCEEEEEESSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEEecCCCCccceEEEEcCCC---------------------------CCCEEEeCCCCcceeeEEcCCCCEEEEEE
Confidence 45555543 7999999863 23455667788999999999999999999
Q ss_pred CCC---cEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEE-EEeCCCc--EEEEECCCCeEEEEeecCCCCeEEEEEe
Q 009715 299 RDG---YLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYIL-TGGEDDL--VQVWSMEDRKVVAWGEGHNSWVSGVAFD 372 (528)
Q Consensus 299 ~dg---~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~-sg~~dg~--v~vwd~~~~~~~~~~~~h~~~V~~v~f~ 372 (528)
.++ .|++||+.+++... +..|.+.+.+++|+|||++|+ +++.|+. |++||+++++. ..+..|...+.+++|+
T Consensus 198 ~~~~~~~i~~~d~~tg~~~~-l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s 275 (415)
T 2hqs_A 198 FESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWF 275 (415)
T ss_dssp CTTSSCEEEEEETTTCCEEE-EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEEC
T ss_pred ecCCCcEEEEEECCCCcEEE-eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEEC
Confidence 875 99999999988754 556788899999999999888 6666654 99999998876 5667788999999999
Q ss_pred cCCCCCCCCCCccceeEEEEEEeC-CC--eEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecC---CCC
Q 009715 373 SYWSQPNSDGTAETVMYRFGSVGQ-DT--RLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTL---QPA 446 (528)
Q Consensus 373 p~~~~~~~dg~~~~~~~~l~s~s~-D~--~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~---~~~ 446 (528)
| || .+|+.++. ++ .|.+||+.+++.............+.|++++. .+..... ...
T Consensus 276 p-------dg------~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~------~l~~~~~~~g~~~ 336 (415)
T 2hqs_A 276 P-------DS------QNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGK------FMVMVSSNGGQQH 336 (415)
T ss_dssp T-------TS------SEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSS------EEEEEEECSSCEE
T ss_pred C-------CC------CEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCC------EEEEEECcCCceE
Confidence 9 99 56777665 44 68888998877543222323445677888873 2322222 346
Q ss_pred ceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEECCC---eEEEEeCCCCccc-cCCCccce--EEEccCCce
Q 009715 447 PSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCREG---HIKIWMRPGVAES-QSSSSETV--LSTSSKDKP 515 (528)
Q Consensus 447 ~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg---~i~iW~~~~~~~~-~~~~~~~v--l~~spd~~~ 515 (528)
+.+||+...+. ..+..|. .+.+++|+||+ |++++.|+ .|++||+.++... ...+.+.| ++|+|...+
T Consensus 337 i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~~~~ 411 (415)
T 2hqs_A 337 IAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYLHH 411 (415)
T ss_dssp EEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCCCCC
T ss_pred EEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCcccccccc
Confidence 88899987765 3455554 89999999985 88888776 8999999876644 44566677 888987643
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=8.7e-23 Score=214.31 Aligned_cols=298 Identities=10% Similarity=0.021 Sum_probs=220.1
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEc--CC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEK--SK 242 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~--~~ 242 (528)
++++..++++..++.|.+||..+. + +..... .+. .+..++|+|+|+ +|++++.|+.|++||+ .+
T Consensus 146 ~p~~~~~vs~~~d~~V~v~D~~t~-----~-~~~~i~------~g~-~~~~v~~spdg~-~l~v~~~d~~V~v~D~~~~t 211 (543)
T 1nir_A 146 DLPNLFSVTLRDAGQIALVDGDSK-----K-IVKVID------TGY-AVHISRMSASGR-YLLVIGRDARIDMIDLWAKE 211 (543)
T ss_dssp CGGGEEEEEEGGGTEEEEEETTTC-----C-EEEEEE------CST-TEEEEEECTTSC-EEEEEETTSEEEEEETTSSS
T ss_pred CCCCEEEEEEcCCCeEEEEECCCc-----e-EEEEEe------cCc-ccceEEECCCCC-EEEEECCCCeEEEEECcCCC
Confidence 567778888889999999998762 1 111111 011 288999999999 8999999999999999 33
Q ss_pred CCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC----CCCEEEEEe-CCCcEEEEecCCceEEeee
Q 009715 243 DGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST----DGTYLATVG-RDGYLRVFDYSKEQLICGG 317 (528)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp----dg~~l~s~~-~dg~i~vwd~~~~~~~~~~ 317 (528)
. ..+..+. +...+..++|+| ||++|++++ .++.|.+||..+++++..+
T Consensus 212 ~--------------------------~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 212 P--------------------------TKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp C--------------------------EEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEE
T ss_pred C--------------------------cEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceee
Confidence 1 1233333 235678999999 999999988 4899999999999988776
Q ss_pred cc----------cC-CCeEEEEEcCCCCE-EEEEeCCCcEEEEECCCCeEEE--EeecCCCCeEEEEEecCCCCCCCCCC
Q 009715 318 KS----------YY-GALLCCAWSMDGKY-ILTGGEDDLVQVWSMEDRKVVA--WGEGHNSWVSGVAFDSYWSQPNSDGT 383 (528)
Q Consensus 318 ~~----------~~-~~v~~l~~sp~g~~-l~sg~~dg~v~vwd~~~~~~~~--~~~~h~~~V~~v~f~p~~~~~~~dg~ 383 (528)
.. |. ..+..+.++|+++. +++...++.|.+||+.+.+.+. .+. +...+.++.|+| ||+
T Consensus 265 ~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~sp-------dg~ 336 (543)
T 1nir_A 265 STRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDS-------SHR 336 (543)
T ss_dssp ECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECT-------TSC
T ss_pred cccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECC-------CCC
Confidence 54 22 26889999997764 5567779999999998865443 443 677899999999 982
Q ss_pred ccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC---CCCCCCee-cCCCCCccCCceeeeec-CCCCceeeecCC----
Q 009715 384 AETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG---PLGGSPTF-STGSQSAHWDNVCPVGT-LQPAPSMRDVPK---- 454 (528)
Q Consensus 384 ~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~---~~~~~~~~-s~~~~~~~~d~~~~~g~-~~~~~~~~d~~~---- 454 (528)
++++++..+++|.+||+.+++++..+... ++.....| .+++ ...+..+. .+..+.+||+..
T Consensus 337 -----~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~-----g~~~~s~~~~d~~V~v~d~~~~~~~ 406 (543)
T 1nir_A 337 -----YFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKY-----GPVWSTSHLGDGSISLIGTDPKNHP 406 (543)
T ss_dssp -----EEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTT-----EEEEEEEBSSSSEEEEEECCTTTCT
T ss_pred -----EEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCC-----ccEEEeccCCCceEEEEEeCCCCCc
Confidence 34556667899999999999999888743 22222223 2331 12234443 467899999988
Q ss_pred ---CCceEEeecCCCCeEEEEEeCCe--EEEEE-------CCCeEEEEeCCCCccc-c----------CCCccce--EEE
Q 009715 455 ---LSPLVAHRVHTEPLSGLIFTQES--VLTVC-------REGHIKIWMRPGVAES-Q----------SSSSETV--LST 509 (528)
Q Consensus 455 ---~~~~~~~~~h~~~V~~l~~s~d~--l~t~s-------~Dg~i~iW~~~~~~~~-~----------~~~~~~v--l~~ 509 (528)
++.++++.+|...+..|+|+|++ |++++ .+++|.|||+.+.+.. . ..+...+ ++|
T Consensus 407 ~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 486 (543)
T 1nir_A 407 QYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEY 486 (543)
T ss_dssp TTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEE
T ss_pred hhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccC
Confidence 88999999999999999999985 77776 3789999999876643 1 1233444 888
Q ss_pred ccCCceEEEeee
Q 009715 510 SSKDKPLLSSKV 521 (528)
Q Consensus 510 spd~~~l~s~~~ 521 (528)
+|||++|.++..
T Consensus 487 ~~~g~~~~~s~~ 498 (543)
T 1nir_A 487 NKRGDEVWFSVW 498 (543)
T ss_dssp CSSSSEEEEEEE
T ss_pred CCCCCEEEEEee
Confidence 999999997754
No 129
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=1.8e-22 Score=220.87 Aligned_cols=262 Identities=14% Similarity=0.141 Sum_probs=190.4
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG 291 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg 291 (528)
.|.+++|+|||+ +|++++. +.|++||+...... .+..+..|...+.+++|+|||
T Consensus 110 ~v~~~~~SpDg~-~l~~~~~-~~i~~~d~~~~~~~------------------------~~~~l~~~~~~~~~~~~SPDG 163 (741)
T 2ecf_A 110 GIVDYQWSPDAQ-RLLFPLG-GELYLYDLKQEGKA------------------------AVRQLTHGEGFATDAKLSPKG 163 (741)
T ss_dssp ESCCCEECTTSS-EEEEEET-TEEEEEESSSCSTT------------------------SCCBCCCSSSCEEEEEECTTS
T ss_pred CcceeEECCCCC-EEEEEeC-CcEEEEECCCCCcc------------------------eEEEcccCCcccccccCCCCC
Confidence 488999999999 7888776 99999999753100 111122345679999999999
Q ss_pred CEEEEEeCCCcEEEEecCCceEEeeecccCCC----------------eEEEEEcCCCCEEEEEeCCC------------
Q 009715 292 TYLATVGRDGYLRVFDYSKEQLICGGKSYYGA----------------LLCCAWSMDGKYILTGGEDD------------ 343 (528)
Q Consensus 292 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~----------------v~~l~~sp~g~~l~sg~~dg------------ 343 (528)
++|++++. +.|++||+.+++.......+... +..++|+|||++|++++.|+
T Consensus 164 ~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~ 242 (741)
T 2ecf_A 164 GFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVY 242 (741)
T ss_dssp SEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEEC
T ss_pred CEEEEEeC-CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCC
Confidence 99999874 68999999988876654433332 47799999999999987765
Q ss_pred ---------------------cEEEEECCC-CeEEEEee--cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe----
Q 009715 344 ---------------------LVQVWSMED-RKVVAWGE--GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG---- 395 (528)
Q Consensus 344 ---------------------~v~vwd~~~-~~~~~~~~--~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s---- 395 (528)
.|++||+.+ ++...... .|...+..++| | || .+|+.++
T Consensus 243 p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-p-------Dg------~~l~~~~~~~~ 308 (741)
T 2ecf_A 243 ADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-R-------DP------QHLSFQRQSRD 308 (741)
T ss_dssp SSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-E-------ET------TEEEEEEEETT
T ss_pred CCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-C-------CC------CEEEEEEeccc
Confidence 789999998 87655443 47888999999 9 99 4566554
Q ss_pred -CCCeEEEEEccCCeEEEEeecCC-----CCCCCeecCCCCCccCCceeeeecCCCCceeeecC-CCCceEEeecCCCCe
Q 009715 396 -QDTRLLLWDLEMDEIVVPLRRGP-----LGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVP-KLSPLVAHRVHTEPL 468 (528)
Q Consensus 396 -~D~~i~lwd~~~~~~~~~~~~~~-----~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~-~~~~~~~~~~h~~~V 468 (528)
.+..|++||+.+++....+.... ....+.|++++. .+..+..++...+|.+. ... ...+..|...|
T Consensus 309 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~------~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v 381 (741)
T 2ecf_A 309 QKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS------ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSV 381 (741)
T ss_dssp SSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC------EEEEECTTSSCEEEEECSSSC-EEESCCSSSCE
T ss_pred CCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe------EEEEecCCCccEEEEEcCCCC-eeeeeecceEE
Confidence 36789999999998877665432 345788988873 34455566667777765 334 67777888889
Q ss_pred EEE-EEeCCe--E-EEEECCC--eEEEEeCCC--CccccCCCccce--EEEccCCceEEEeee
Q 009715 469 SGL-IFTQES--V-LTVCREG--HIKIWMRPG--VAESQSSSSETV--LSTSSKDKPLLSSKV 521 (528)
Q Consensus 469 ~~l-~~s~d~--l-~t~s~Dg--~i~iW~~~~--~~~~~~~~~~~v--l~~spd~~~l~s~~~ 521 (528)
..+ .|+||+ | ++++.|+ .++||++.. ...........+ ++|||||++|+....
T Consensus 382 ~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~~~ 444 (741)
T 2ecf_A 382 DELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDSWS 444 (741)
T ss_dssp EEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEEEE
T ss_pred EeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEEec
Confidence 887 599985 5 4555565 899999753 322222223444 889999999987643
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=1.7e-21 Score=204.47 Aligned_cols=313 Identities=12% Similarity=0.073 Sum_probs=215.7
Q ss_pred CccEEEEeCCCcEEEEeCCCCCCC-----CCCCCeEEEEecCCcEEEEEc--cccccccccceeeeeeeccCCcccCCce
Q 009715 141 KGTYIIFNVGDAIFISDLNSQDKD-----AKDGHDLLIGLNSGDVYSVSL--RQQLQDVGKKLVGAHHYNKDGSVNNSRC 213 (528)
Q Consensus 141 ~g~~~~~~~~~~i~v~~~~~~~~~-----~~~~~~l~~g~~~G~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~h~~~v 213 (528)
++.+.+|+....-.+..+..+... ++++++|+++..++.|.+||+ .+. ....... +...+
T Consensus 158 d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~------~~~~~i~-------~g~~p 224 (543)
T 1nir_A 158 AGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEP------TKVAEIK-------IGIEA 224 (543)
T ss_dssp GTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSC------EEEEEEE-------CCSEE
T ss_pred CCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCC------cEEEEEe-------cCCCc
Confidence 566666665443222222211111 899999999999999999999 431 1111111 34567
Q ss_pred eEEEEee----CCCcEEEEEe-CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEee----------c
Q 009715 214 TSVTWVP----GGDGAFVVGH-ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHI----------C 278 (528)
Q Consensus 214 ~~l~~~p----~g~~~l~tg~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------h 278 (528)
..++|+| +|+ +|++++ .+++|.|||..+. ++++.+.. |
T Consensus 225 ~~va~sp~~~~dg~-~l~v~~~~~~~v~v~D~~t~--------------------------~~~~~i~~~g~~~~~~~~~ 277 (543)
T 1nir_A 225 RSVESSKFKGYEDR-YTIAGAYWPPQFAIMDGETL--------------------------EPKQIVSTRGMTVDTQTYH 277 (543)
T ss_dssp EEEEECCSTTCTTT-EEEEEEEESSEEEEEETTTC--------------------------CEEEEEECCEECSSSCCEE
T ss_pred ceEEeCCCcCCCCC-EEEEEEccCCeEEEEecccc--------------------------ccceeecccCcccCccccc
Confidence 9999999 999 777776 5899999998652 11222211 2
Q ss_pred -CCCeEEEEECCCCC-EEEEEeCCCcEEEEecCCceEEe--eecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCC
Q 009715 279 -QGSINSIAFSTDGT-YLATVGRDGYLRVFDYSKEQLIC--GGKSYYGALLCCAWSMDGKYILTGG-EDDLVQVWSMEDR 353 (528)
Q Consensus 279 -~~~v~~l~~spdg~-~l~s~~~dg~i~vwd~~~~~~~~--~~~~~~~~v~~l~~sp~g~~l~sg~-~dg~v~vwd~~~~ 353 (528)
...+..+.++|++. ++++...++.|.+||+.+.+.+. .+ .+...+..+.|+|+|++|++++ .++.|.+||++++
T Consensus 278 ~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg 356 (543)
T 1nir_A 278 PEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR 356 (543)
T ss_dssp SCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred cCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC
Confidence 23788999999765 45566788999999998765332 33 3556688899999999877654 5889999999999
Q ss_pred eEEEEeec----CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe-CCCeEEEEEccC-------CeEEEEeecCC-CC
Q 009715 354 KVVAWGEG----HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG-QDTRLLLWDLEM-------DEIVVPLRRGP-LG 420 (528)
Q Consensus 354 ~~~~~~~~----h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s-~D~~i~lwd~~~-------~~~~~~~~~~~-~~ 420 (528)
+++..+.. |......+ ++| ++. .+++++. .|++|.+||+.+ .+++.++.... ..
T Consensus 357 ~l~~~i~~g~~ph~g~g~~~-~~p-------~~g-----~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~ 423 (543)
T 1nir_A 357 RLSALVDVGKTPHPGRGANF-VHP-------KYG-----PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGS 423 (543)
T ss_dssp EEEEEEECSSSBCCTTCEEE-EET-------TTE-----EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCC
T ss_pred eEEEeeccCCCCCCCCCccc-CCC-------CCc-----cEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCc
Confidence 99888874 65544443 467 631 5677775 689999999998 88999998643 44
Q ss_pred CCCeecCCCCCccCCceeeeec-------CCCCceeeecCCCCce-EEe--------ecCCCCeEEEEEeCCe--EEEEE
Q 009715 421 GSPTFSTGSQSAHWDNVCPVGT-------LQPAPSMRDVPKLSPL-VAH--------RVHTEPLSGLIFTQES--VLTVC 482 (528)
Q Consensus 421 ~~~~~s~~~~~~~~d~~~~~g~-------~~~~~~~~d~~~~~~~-~~~--------~~h~~~V~~l~~s~d~--l~t~s 482 (528)
..+.+++++. .+.+.. .+..+.+||+.+.+.. ..+ ..|...+..++|+|++ |+.+.
T Consensus 424 ~~v~~~pdg~------~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~ 497 (543)
T 1nir_A 424 LFIKTHPKSS------HLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSV 497 (543)
T ss_dssp CCEECCTTCC------EEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEE
T ss_pred eEEEcCCCCC------cEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEe
Confidence 6788888873 232322 2568999999988876 443 3566789999999986 54442
Q ss_pred -----CCCeEEEEeCCCCccccCCCccceEEEccCCce
Q 009715 483 -----REGHIKIWMRPGVAESQSSSSETVLSTSSKDKP 515 (528)
Q Consensus 483 -----~Dg~i~iW~~~~~~~~~~~~~~~vl~~spd~~~ 515 (528)
.|+.|.|||..+.+....-... -..+|+||+
T Consensus 498 ~~~~~~~~~i~v~D~~t~~~~~~i~~~--~~~~p~g~~ 533 (543)
T 1nir_A 498 WNGKNDSSALVVVDDKTLKLKAVVKDP--RLITPTGKF 533 (543)
T ss_dssp ECCTTSCCEEEEEETTTTEEEEEECCT--TCCSEEEEE
T ss_pred ecCCCCCCeEEEEECCCceEEEeecCC--CccCCCeee
Confidence 4799999999987754322111 124577776
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=2.5e-21 Score=196.87 Aligned_cols=245 Identities=13% Similarity=0.081 Sum_probs=184.4
Q ss_pred CCeEEEEecC------CcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCc---eEEEE
Q 009715 168 GHDLLIGLNS------GDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADG---NLYVY 238 (528)
Q Consensus 168 ~~~l~~g~~~------G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg---~v~vw 238 (528)
+..++....+ +.|++||+.... .. .+ ..|...|.+++|+|+|+ .|++++.|+ .|++|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~------~~---~l----~~~~~~v~~~~~Spdg~-~la~~s~~~~~~~i~~~ 208 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN------QF---VV----HRSPQPLMSPAWSPDGS-KLAYVTFESGRSALVIQ 208 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS------CE---EE----EEESSCEEEEEECTTSS-EEEEEECTTSSCEEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC------CE---EE----eCCCCcceeeEEcCCCC-EEEEEEecCCCcEEEEE
Confidence 5666666654 799999986411 11 11 12778999999999999 888888875 99999
Q ss_pred EcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEE-EEeCCCc--EEEEecCCceEEe
Q 009715 239 EKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLA-TVGRDGY--LRVFDYSKEQLIC 315 (528)
Q Consensus 239 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~-s~~~dg~--i~vwd~~~~~~~~ 315 (528)
|+.+. ....+..|.+.+.+++|+|||++|+ +++.|+. |++||+.+++. .
T Consensus 209 d~~tg---------------------------~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~ 260 (415)
T 2hqs_A 209 TLANG---------------------------AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-R 260 (415)
T ss_dssp ETTTC---------------------------CEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-E
T ss_pred ECCCC---------------------------cEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-E
Confidence 99752 1233455667899999999999888 5665554 99999998876 4
Q ss_pred eecccCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEE
Q 009715 316 GGKSYYGALLCCAWSMDGKYILTGGE-DD--LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFG 392 (528)
Q Consensus 316 ~~~~~~~~v~~l~~sp~g~~l~sg~~-dg--~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~ 392 (528)
.+..|...+.+++|+|||++|++++. ++ .|++||+.+++. ..+..|...+.+++|+| || .+|+
T Consensus 261 ~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~sp-------dG------~~l~ 326 (415)
T 2hqs_A 261 QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSS-------DG------KFMV 326 (415)
T ss_dssp ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECT-------TS------SEEE
T ss_pred eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECC-------CC------CEEE
Confidence 56678888999999999999998876 44 688889988764 34555778899999999 99 5677
Q ss_pred EEeCC---CeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCC---CceeeecCCCCceEEeecCCC
Q 009715 393 SVGQD---TRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQP---APSMRDVPKLSPLVAHRVHTE 466 (528)
Q Consensus 393 s~s~D---~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~---~~~~~d~~~~~~~~~~~~h~~ 466 (528)
.++.+ ..|++||+.+++... +........+.|++++. .+..+..+. .+.+||+. ...+..+..|.+
T Consensus 327 ~~~~~~g~~~i~~~d~~~~~~~~-l~~~~~~~~~~~spdg~------~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~ 398 (415)
T 2hqs_A 327 MVSSNGGQQHIAKQDLATGGVQV-LSSTFLDETPSLAPNGT------MVIYSSSQGMGSVLNLVSTD-GRFKARLPATDG 398 (415)
T ss_dssp EEEECSSCEEEEEEETTTCCEEE-CCCSSSCEEEEECTTSS------EEEEEEEETTEEEEEEEETT-SCCEEECCCSSS
T ss_pred EEECcCCceEEEEEECCCCCEEE-ecCCCCcCCeEEcCCCC------EEEEEEcCCCccEEEEEECC-CCcEEEeeCCCC
Confidence 66654 589999999988753 44334566788888873 333333333 57888876 456778889999
Q ss_pred CeEEEEEeCC
Q 009715 467 PLSGLIFTQE 476 (528)
Q Consensus 467 ~V~~l~~s~d 476 (528)
.|.+++|+|.
T Consensus 399 ~v~~~~~~~~ 408 (415)
T 2hqs_A 399 QVKFPAWSPY 408 (415)
T ss_dssp EEEEEEECCC
T ss_pred CCcCCccccc
Confidence 9999999995
No 132
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=6.1e-22 Score=224.63 Aligned_cols=369 Identities=12% Similarity=0.101 Sum_probs=237.8
Q ss_pred hhhcCCCCCceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCC-cEEEEeCCCCCCC----C
Q 009715 91 AKLLGTGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGD-AIFISDLNSQDKD----A 165 (528)
Q Consensus 91 ~~~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~-~i~v~~~~~~~~~----~ 165 (528)
.++|-...+.....+.+|.+.+.++.|++. .++.+++. +....++.++... ......-.. ... +
T Consensus 185 ~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d--~l~~~~~~--------dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~S 253 (1045)
T 1k32_A 185 GKIWIEVNSGAFKKIVDMSTHVSSPVIVGH--RIYFITDI--------DGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLN 253 (1045)
T ss_dssp CEEEEEEETTEEEEEECCSSCCEEEEEETT--EEEEEECT--------TSSCEEEEEETTSCSCEECCCCC-SSCEEEEE
T ss_pred CCEEEECCCCCeEECcCCCCcccceEEeCC--EEEEEEec--------cCceEEEEEeCCCCcceEecCCC-CcceeeEc
Confidence 445543333344556799999999988762 33333332 1222344434321 221111111 111 7
Q ss_pred CCCCeEEEEecCCcEEEEEccccccccccceeeeeee-----ccCCcccCCceeEEEEe-eCCCcEEEEEeCCceEEEEE
Q 009715 166 KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHY-----NKDGSVNNSRCTSVTWV-PGGDGAFVVGHADGNLYVYE 239 (528)
Q Consensus 166 ~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~-----~~~~~~h~~~v~~l~~~-p~g~~~l~tg~~dg~v~vwd 239 (528)
++++.|+.+ .++.|++||+... .+. .... ......|...+.+++|+ |+|+ .|++++ ++.|++|+
T Consensus 254 pDG~~la~~-~~~~i~~~d~~~~------~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~-~la~~~-~~~i~~~~ 323 (1045)
T 1k32_A 254 TDGRRILFS-KGGSIYIFNPDTE------KIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGD-LIAFVS-RGQAFIQD 323 (1045)
T ss_dssp ESSSCEEEE-ETTEEEEECTTTC------CEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGG-CEEEEE-TTEEEEEC
T ss_pred CCCCEEEEE-eCCEEEEecCCce------Eee-eeccCcccccccccccccccceeeecCCCCC-EEEEEE-cCEEEEEc
Confidence 889988887 5899999998431 111 0000 00011255679999999 9999 777776 78999999
Q ss_pred cCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCC-CeEEEEECCCCCEEEEEeCCCcEE-EEecCCceEEeee
Q 009715 240 KSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQG-SINSIAFSTDGTYLATVGRDGYLR-VFDYSKEQLICGG 317 (528)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~spdg~~l~s~~~dg~i~-vwd~~~~~~~~~~ 317 (528)
+... ....+..|.. .+..++|+ ||+.|++++.+..+. +||+.+++.....
T Consensus 324 ~~~~---------------------------~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~ 375 (1045)
T 1k32_A 324 VSGT---------------------------YVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE 375 (1045)
T ss_dssp TTSS---------------------------BEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC
T ss_pred CCCC---------------------------ceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec
Confidence 8642 1122233445 78899999 999999999888888 9999877765444
Q ss_pred cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC
Q 009715 318 KSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD 397 (528)
Q Consensus 318 ~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D 397 (528)
.|...+..++|+|||++|++++.++.|++||+.+++....+.+|...+.+++|+| || .+|++++.+
T Consensus 376 -~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp-------DG------~~la~~~~~ 441 (1045)
T 1k32_A 376 -ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISD-------NS------RFIAYGFPL 441 (1045)
T ss_dssp -CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECT-------TS------CEEEEEEEE
T ss_pred -CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECC-------CC------CeEEEEecC
Confidence 7778899999999999999999999999999999998888878999999999999 99 677777664
Q ss_pred C----------eEEEEEccCCeEEEEeecCCCCCCCeecCCCCCcc---CCceeeeec-------CCCCce---------
Q 009715 398 T----------RLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAH---WDNVCPVGT-------LQPAPS--------- 448 (528)
Q Consensus 398 ~----------~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~---~d~~~~~g~-------~~~~~~--------- 448 (528)
+ .|++||+.+++......+......+.|++++.... .+.....+. ......
T Consensus 442 ~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (1045)
T 1k32_A 442 KHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPG 521 (1045)
T ss_dssp CSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTT
T ss_pred ccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCC
Confidence 4 99999999987433222323344567777774111 000000000 000000
Q ss_pred -----------------eeecCCC-CceEEeecCCCCeEEEEEeCCe--EEE-------------EECCCeEEEEeCCCC
Q 009715 449 -----------------MRDVPKL-SPLVAHRVHTEPLSGLIFTQES--VLT-------------VCREGHIKIWMRPGV 495 (528)
Q Consensus 449 -----------------~~d~~~~-~~~~~~~~h~~~V~~l~~s~d~--l~t-------------~s~Dg~i~iW~~~~~ 495 (528)
.+++... ..+..+..|...+..++|+||+ +++ ...+..|.+||+.++
T Consensus 522 ~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~ 601 (1045)
T 1k32_A 522 SPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTR 601 (1045)
T ss_dssp CCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTC
T ss_pred CCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCC
Confidence 1222221 2344556688889999999996 443 123457888888887
Q ss_pred ccccCCCccceEEEccCCceEEEeeee
Q 009715 496 AESQSSSSETVLSTSSKDKPLLSSKVV 522 (528)
Q Consensus 496 ~~~~~~~~~~vl~~spd~~~l~s~~~~ 522 (528)
+..........+++||||++|+++..+
T Consensus 602 ~~~~l~~~v~~~~~S~DG~~l~~~~~~ 628 (1045)
T 1k32_A 602 KVTEVKNNLTDLRLSADRKTVMVRKDD 628 (1045)
T ss_dssp CEEEEEEEEEEEEECTTSCEEEEEETT
T ss_pred cEEEeecCcceEEECCCCCEEEEEcCC
Confidence 654333222238899999999987644
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=2e-20 Score=183.65 Aligned_cols=290 Identities=9% Similarity=0.062 Sum_probs=194.8
Q ss_pred CeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCC
Q 009715 169 HDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDS 248 (528)
Q Consensus 169 ~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~ 248 (528)
..+++...++.|.+||+.+.. . ..... .+...+ +++|+|+++.+++++..++.|++||+.....
T Consensus 11 ~~~v~~~~~~~v~~~d~~~~~-----~-~~~~~------~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~--- 74 (331)
T 3u4y_A 11 FGIVVEQHLRRISFFSTDTLE-----I-LNQIT------LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP--- 74 (331)
T ss_dssp EEEEEEGGGTEEEEEETTTCC-----E-EEEEE------CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC---
T ss_pred EEEEEecCCCeEEEEeCcccc-----e-eeeEE------ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce---
Confidence 345667788999999987621 1 11111 134455 9999999994444445589999999875211
Q ss_pred ccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCC---cEEEEecCCceEEeeecccCCCeE
Q 009715 249 SFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDG---YLRVFDYSKEQLICGGKSYYGALL 325 (528)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~v~ 325 (528)
....+..+..+..+++|+|++++|+++..++ .|.+||+.+++.+..+.. .....
T Consensus 75 ----------------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~ 131 (331)
T 3u4y_A 75 ----------------------KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAV 131 (331)
T ss_dssp ----------------------EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEE
T ss_pred ----------------------eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCcc
Confidence 1334444555555599999999999555553 899999999998887664 45578
Q ss_pred EEEEcCCCCEEEE-EeCCCc-EEEEECCCCeEE----EEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCe
Q 009715 326 CCAWSMDGKYILT-GGEDDL-VQVWSMEDRKVV----AWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTR 399 (528)
Q Consensus 326 ~l~~sp~g~~l~s-g~~dg~-v~vwd~~~~~~~----~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~ 399 (528)
+++|+|+|++|++ ...++. |.+|++.....+ .....+...+..++|+| ||+ .+++++..++.
T Consensus 132 ~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp-------dg~-----~l~v~~~~~~~ 199 (331)
T 3u4y_A 132 GIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP-------DGN-----FAFVANLIGNS 199 (331)
T ss_dssp EEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT-------TSS-----EEEEEETTTTE
T ss_pred ceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC-------CCC-----EEEEEeCCCCe
Confidence 9999999985554 456688 999998864322 11223456689999999 983 35566667899
Q ss_pred EEEEEccCCeE---EEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCc--eEEeecC----CC---C
Q 009715 400 LLLWDLEMDEI---VVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSP--LVAHRVH----TE---P 467 (528)
Q Consensus 400 i~lwd~~~~~~---~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~--~~~~~~h----~~---~ 467 (528)
|.+||+.+++. +..+........++|++++.. .+.....+..+.+||..+.+. +..+..+ .. .
T Consensus 200 v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~-----l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (331)
T 3u4y_A 200 IGILETQNPENITLLNAVGTNNLPGTIVVSRDGST-----VYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFG 274 (331)
T ss_dssp EEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSE-----EEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTT
T ss_pred EEEEECCCCcccceeeeccCCCCCceEEECCCCCE-----EEEEEcCCCEEEEEECCCCceeeecccccccccCCCCccc
Confidence 99999999888 777877677788899998841 112222345578888887655 3333322 22 2
Q ss_pred eEEEEEeCCe--EEEE-ECCCeEEEEeCCCCccccC---CCccceEEEccCCc
Q 009715 468 LSGLIFTQES--VLTV-CREGHIKIWMRPGVAESQS---SSSETVLSTSSKDK 514 (528)
Q Consensus 468 V~~l~~s~d~--l~t~-s~Dg~i~iW~~~~~~~~~~---~~~~~vl~~spd~~ 514 (528)
+..++|+||+ |+.+ ..++.|++||+........ ...+.+..+.||..
T Consensus 275 ~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~g~~~~~~~~~~ 327 (331)
T 3u4y_A 275 ANQMALNKTETKLFISANISRELKVFTISGKVVGYVAGIEANGGIAICHPDKH 327 (331)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEECTTCCCBSCEEECCCC--
T ss_pred ccceEECCCCCEEEEecCCCCcEEEEEecCCcccceecccccCCeEEECCccc
Confidence 3568999985 5544 4567999999987653322 23344455577654
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=1.2e-21 Score=213.49 Aligned_cols=300 Identities=12% Similarity=0.042 Sum_probs=199.5
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCC---ceeEEEEeeCCCcEEEEEeCC---------
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNS---RCTSVTWVPGGDGAFVVGHAD--------- 232 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~~p~g~~~l~tg~~d--------- 232 (528)
++|++++++ ..+|.|++||+.+.. .. ..+. .|.. .|.+++|+|||+ +|++++.+
T Consensus 25 spdg~~~~~-~~dg~i~~~d~~~g~-----~~---~~~~----~~~~~~~~v~~~~~SpDg~-~l~~~~~~~~~~~~~~~ 90 (723)
T 1xfd_A 25 ISDTEFIYR-EQKGTVRLWNVETNT-----ST---VLIE----GKKIESLRAIRYEISPDRE-YALFSYNVEPIYQHSYT 90 (723)
T ss_dssp SSSSCBCCC-CSSSCEEEBCGGGCC-----CE---EEEC----TTTTTTTTCSEEEECTTSS-EEEEEESCCCCSSSCCC
T ss_pred cCCCcEEEE-eCCCCEEEEECCCCc-----EE---EEec----cccccccccceEEECCCCC-EEEEEecCccceeecce
Confidence 577776655 678899999987621 11 1111 1222 599999999999 88888764
Q ss_pred ceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCce
Q 009715 233 GNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQ 312 (528)
Q Consensus 233 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~ 312 (528)
+.|++||+..... ..+.. ...|...+..++|||||++|+.++. +.|++||+.+++
T Consensus 91 ~~i~~~d~~~~~~--~~l~~----------------------~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~ 145 (723)
T 1xfd_A 91 GYYVLSKIPHGDP--QSLDP----------------------PEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQ 145 (723)
T ss_dssp SEEEEEESSSCCC--EECCC----------------------TTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSC
T ss_pred eeEEEEECCCCce--EeccC----------------------CccccccccccEECCCCCEEEEEEC-CeEEEEECCCCc
Confidence 7889999976321 11110 0123345788999999999999986 799999999887
Q ss_pred EEeeecccCCC------------------eEEEEEcCCCCEEEEEeCCC-------------------------------
Q 009715 313 LICGGKSYYGA------------------LLCCAWSMDGKYILTGGEDD------------------------------- 343 (528)
Q Consensus 313 ~~~~~~~~~~~------------------v~~l~~sp~g~~l~sg~~dg------------------------------- 343 (528)
.......+... +.+++|+|||++|++++.|+
T Consensus 146 ~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 225 (723)
T 1xfd_A 146 AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSEN 225 (723)
T ss_dssp CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCC
T ss_pred eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCC
Confidence 76555443333 37899999999999887553
Q ss_pred ---cEEEEECCCCeEEEEeecC------CCCeEEEEEecCCCCCCCCCCccceeEEEEEEeC----CCeEEEEEccCCeE
Q 009715 344 ---LVQVWSMEDRKVVAWGEGH------NSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQ----DTRLLLWDLEMDEI 410 (528)
Q Consensus 344 ---~v~vwd~~~~~~~~~~~~h------~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~----D~~i~lwd~~~~~~ 410 (528)
.|++||+.+++....+..+ ...+..++|+| || .+|++... +..|++||+.++++
T Consensus 226 ~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~Sp-------Dg------~~l~~~~~~~~~~~~i~~~d~~~g~~ 292 (723)
T 1xfd_A 226 PSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT-------ST------KVAVTWLNRAQNVSILTLCDATTGVC 292 (723)
T ss_dssp CEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESS-------SS------EEEEEEEETTSCEEEEEEEETTTCCE
T ss_pred CeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeC-------CC------eEEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 7999999988765666544 67899999999 99 66766543 36899999999987
Q ss_pred EEEeecC--CCC----CCCeecCCCCCccCCceeeeecCCC------Cceeee-cCCCCc--eEEeecCCCCeEE-EEEe
Q 009715 411 VVPLRRG--PLG----GSPTFSTGSQSAHWDNVCPVGTLQP------APSMRD-VPKLSP--LVAHRVHTEPLSG-LIFT 474 (528)
Q Consensus 411 ~~~~~~~--~~~----~~~~~s~~~~~~~~d~~~~~g~~~~------~~~~~d-~~~~~~--~~~~~~h~~~V~~-l~~s 474 (528)
...+... ... ..+.|++++....+ .....++ .+.+|| ....+. ...+..+...+.. ++|+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~----~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~s 368 (723)
T 1xfd_A 293 TKKHEDESEAWLHRQNEEPVFSKDGRKFFF----IRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYD 368 (723)
T ss_dssp EEEEEEECSSCCCCCCCCCEECTTSCSEEE----EEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEE
T ss_pred eEEEEeccCCEEeccCCCceEcCCCCeEEE----EEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEc
Confidence 7655432 112 37889998852111 0122222 355566 233331 4444444445555 6999
Q ss_pred CCe--EEEEECC---CeEEEEeCCCCc---cc-cCC---Cccce--EEEccCCceEEEee
Q 009715 475 QES--VLTVCRE---GHIKIWMRPGVA---ES-QSS---SSETV--LSTSSKDKPLLSSK 520 (528)
Q Consensus 475 ~d~--l~t~s~D---g~i~iW~~~~~~---~~-~~~---~~~~v--l~~spd~~~l~s~~ 520 (528)
||+ |+..+.+ +.++||++.... .. ... +...+ ++|+|||++|+...
T Consensus 369 pdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 369 EKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp TTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred CCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 985 6655544 789999986432 11 221 34444 89999999998653
No 135
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=9e-21 Score=206.17 Aligned_cols=261 Identities=12% Similarity=0.033 Sum_probs=190.2
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
..|.+++|+|+ . .++.+ .|+.|++||+... ....+..+...+.+++|+||
T Consensus 82 ~~v~~~~~spd-~-~~~~~-~~~~i~~~d~~~~---------------------------~~~~l~~~~~~~~~~~~Spd 131 (706)
T 2z3z_A 82 FPSFRTLDAGR-G-LVVLF-TQGGLVGFDMLAR---------------------------KVTYLFDTNEETASLDFSPV 131 (706)
T ss_dssp CCCEEEEETTT-T-EEEEE-ETTEEEEEETTTT---------------------------EEEEEECCTTCCTTCEECTT
T ss_pred cCceeEEECCC-C-eEEEE-ECCEEEEEECCCC---------------------------ceEEccCCcccccCCcCCCC
Confidence 57999999999 5 45554 3599999998752 12223334567888999999
Q ss_pred CCEEEEEeCCCcEEEEecCC-----ceEEeeecccCCC--------------eEEEEEcCCCCEEEEEe-----------
Q 009715 291 GTYLATVGRDGYLRVFDYSK-----EQLICGGKSYYGA--------------LLCCAWSMDGKYILTGG----------- 340 (528)
Q Consensus 291 g~~l~s~~~dg~i~vwd~~~-----~~~~~~~~~~~~~--------------v~~l~~sp~g~~l~sg~----------- 340 (528)
|++|+++ .|+.|++||+.+ ++.......+... +.+++|+|||++|++++
T Consensus 132 G~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~ 210 (706)
T 2z3z_A 132 GDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPI 210 (706)
T ss_dssp SSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEE
T ss_pred CCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEe
Confidence 9999995 679999999998 7766544433332 47899999999999987
Q ss_pred ----------------------CCCcEEEEECCCCeEEEEee--cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeC
Q 009715 341 ----------------------EDDLVQVWSMEDRKVVAWGE--GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQ 396 (528)
Q Consensus 341 ----------------------~dg~v~vwd~~~~~~~~~~~--~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~ 396 (528)
.+..|++||+.+++...... .|...+..++|+| || .+|++++.
T Consensus 211 ~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-------dg------~~l~~~~~ 277 (706)
T 2z3z_A 211 VDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSP-------DE------NILYVAEV 277 (706)
T ss_dssp EECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECT-------TS------SEEEEEEE
T ss_pred eccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEEC-------CC------CEEEEEEe
Confidence 44679999999987655442 4777899999999 99 67888777
Q ss_pred CC-----eEEEEEccCCeEEEEee-cCC-----CCCCCeecC--CCCCccCCceeeeecCCCCceeeecC-CCCceEEee
Q 009715 397 DT-----RLLLWDLEMDEIVVPLR-RGP-----LGGSPTFST--GSQSAHWDNVCPVGTLQPAPSMRDVP-KLSPLVAHR 462 (528)
Q Consensus 397 D~-----~i~lwd~~~~~~~~~~~-~~~-----~~~~~~~s~--~~~~~~~d~~~~~g~~~~~~~~~d~~-~~~~~~~~~ 462 (528)
|+ .|++||+.+++....+. ... ....+.|++ ++. .+..+..++...+|++. ....+..+.
T Consensus 278 ~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~------~l~~~~~~g~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 278 NRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ------FIWQSRRDGWNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp CTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE------EEEEECTTSSCEEEEEETTSCEEEECC
T ss_pred CCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE------EEEEEccCCccEEEEEECCCCEEEecC
Confidence 75 99999999983333332 111 135678888 763 34555666778888876 556677777
Q ss_pred cCCCCeEE-EEEeCCe--EEEE-ECCC----eEEEEeCCCCccccCCCccce--EEEccCCceEEEeee
Q 009715 463 VHTEPLSG-LIFTQES--VLTV-CREG----HIKIWMRPGVAESQSSSSETV--LSTSSKDKPLLSSKV 521 (528)
Q Consensus 463 ~h~~~V~~-l~~s~d~--l~t~-s~Dg----~i~iW~~~~~~~~~~~~~~~v--l~~spd~~~l~s~~~ 521 (528)
.|...+.. ++|+|++ |+.+ ..++ .|..|++.++......+...+ ++|||||++|+....
T Consensus 352 ~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~ 420 (706)
T 2z3z_A 352 KGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQ 420 (706)
T ss_dssp CSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEE
T ss_pred CCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEEec
Confidence 88888887 7999985 5544 4444 677778777664444455555 889999999987644
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=2.5e-20 Score=184.36 Aligned_cols=258 Identities=12% Similarity=0.130 Sum_probs=186.4
Q ss_pred CCCCeEEEEec-------CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEE
Q 009715 166 KDGHDLLIGLN-------SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVY 238 (528)
Q Consensus 166 ~~~~~l~~g~~-------~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vw 238 (528)
++++.++++.. ++.|++||+.+. + ...... ....+..++|+|+|+.++++...++.|.+|
T Consensus 50 ~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~-----~-~~~~~~-------~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 50 QQENALWLATSQSRKLDKGGVVYRLDPVTL-----E-VTQAIH-------NDLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp TTTTEEEEEECCCTTTEESEEEEEECTTTC-----C-EEEEEE-------ESSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEcCCCcCCCCCccEEEEcCCCC-----e-EEEEEe-------cCCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 66777766663 568999998752 1 111111 233577899999999555566678999999
Q ss_pred EcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecC---------CCeEEEEECCCCCEEEEEe--CCCcEEEEe
Q 009715 239 EKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQ---------GSINSIAFSTDGTYLATVG--RDGYLRVFD 307 (528)
Q Consensus 239 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---------~~v~~l~~spdg~~l~s~~--~dg~i~vwd 307 (528)
|..+.. .+..+..+. ..+.+++|+|++++++++. .++.|.+||
T Consensus 117 d~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 117 DAKTGE--------------------------VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVD 170 (353)
T ss_dssp ETTTCC--------------------------EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEE
T ss_pred eCCCCe--------------------------eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEc
Confidence 987521 112222211 1268899999999888776 478899999
Q ss_pred cCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec----CCCCeEEEEEecCCCCCCCCCC
Q 009715 308 YSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEG----HNSWVSGVAFDSYWSQPNSDGT 383 (528)
Q Consensus 308 ~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~----h~~~V~~v~f~p~~~~~~~dg~ 383 (528)
+.+++.+..+..+...+..++|+|+++++++++.++.|.+||+.+++.+..+.. +...+..++|+| ||+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~-------dg~ 243 (353)
T 3vgz_A 171 GGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT-------ARQ 243 (353)
T ss_dssp TTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET-------TTT
T ss_pred CCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC-------CCC
Confidence 999999888775566688999999999999999999999999999988877663 566788999999 883
Q ss_pred ccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeec
Q 009715 384 AETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRV 463 (528)
Q Consensus 384 ~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~ 463 (528)
.++++...++.|.+||+.+++.+..+..
T Consensus 244 -----~l~~~~~~~~~v~~~d~~~~~~~~~~~~----------------------------------------------- 271 (353)
T 3vgz_A 244 -----RAFITDSKAAEVLVVDTRNGNILAKVAA----------------------------------------------- 271 (353)
T ss_dssp -----EEEEEESSSSEEEEEETTTCCEEEEEEC-----------------------------------------------
T ss_pred -----EEEEEeCCCCEEEEEECCCCcEEEEEEc-----------------------------------------------
Confidence 3455555669999999998887655542
Q ss_pred CCCCeEEEEEeCCe--EEE-EECCCeEEEEeCCCCccccC-CCccc--eEEEccCCceEEEeeeec
Q 009715 464 HTEPLSGLIFTQES--VLT-VCREGHIKIWMRPGVAESQS-SSSET--VLSTSSKDKPLLSSKVVT 523 (528)
Q Consensus 464 h~~~V~~l~~s~d~--l~t-~s~Dg~i~iW~~~~~~~~~~-~~~~~--vl~~spd~~~l~s~~~~g 523 (528)
+. + ..++|+|++ ++. ...++.|.+||+.+++.... ..... -++|+|||++|+++...+
T Consensus 272 ~~-~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 272 PE-S-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp SS-C-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred CC-C-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 11 1 358899974 444 44789999999987664322 21222 289999999888877653
No 137
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.88 E-value=4.7e-21 Score=217.33 Aligned_cols=374 Identities=12% Similarity=0.020 Sum_probs=251.7
Q ss_pred hhhhcCCCCCceeeccCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEEEEeCCCC--CC----
Q 009715 90 AAKLLGTGNGSRTLGFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQ--DK---- 163 (528)
Q Consensus 90 ~~~~~~~~~g~~~~sf~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~--~~---- 163 (528)
...+|....|.. ..+.+|.+.+.++.||| +|..++..+.... .+.+..+++|+..... ...+... ..
T Consensus 34 ~l~~~~~~gg~~-~~lt~~~~~v~~~~~SP-DG~~la~~s~~~~----~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~ 106 (1045)
T 1k32_A 34 DLWEHDLKSGST-RKIVSNLGVINNARFFP-DGRKIAIRVMRGS----SLNTADLYFYNGENGE-IKRITYFSGKSTGRR 106 (1045)
T ss_dssp EEEEEETTTCCE-EEEECSSSEEEEEEECT-TSSEEEEEEEEST----TCCEEEEEEEETTTTE-EEECCCCCEEEETTE
T ss_pred cEEEEECCCCcE-EEeeeCCCcccCeEECC-CCCEEEEEEeecc----CCCCCeEEEEECCCCC-eEEcccCCCcccccc
Confidence 456677765544 66779999999999999 6665555442100 0123466677654432 1222221 11
Q ss_pred ---C----CCCCCeEEEEecC------CcEEEEEcccccccc-ccceeee------------------------------
Q 009715 164 ---D----AKDGHDLLIGLNS------GDVYSVSLRQQLQDV-GKKLVGA------------------------------ 199 (528)
Q Consensus 164 ---~----~~~~~~l~~g~~~------G~v~iwd~~~~~~~~-~~~~~~~------------------------------ 199 (528)
. +||++.++++..+ ..|++||+....... .......
T Consensus 107 ~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~ 186 (1045)
T 1k32_A 107 MFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGK 186 (1045)
T ss_dssp ECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCE
T ss_pred cccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCC
Confidence 1 7899866666543 358888876521100 0000000
Q ss_pred eeec------cCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeE
Q 009715 200 HHYN------KDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIA 273 (528)
Q Consensus 200 ~~~~------~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (528)
+.+. .....|...+.++.|+++ . +++++..|+.+.||.+...+.. ..
T Consensus 187 lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~-l~~~~~~dg~~~l~~~~~~g~~-------------------------~~ 239 (1045)
T 1k32_A 187 IWIEVNSGAFKKIVDMSTHVSSPVIVGH-R-IYFITDIDGFGQIYSTDLDGKD-------------------------LR 239 (1045)
T ss_dssp EEEEEETTEEEEEECCSSCCEEEEEETT-E-EEEEECTTSSCEEEEEETTSCS-------------------------CE
T ss_pred EEEECCCCCeEECcCCCCcccceEEeCC-E-EEEEEeccCceEEEEEeCCCCc-------------------------ce
Confidence 0000 001247788999999988 4 7888888999999987653321 11
Q ss_pred EEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecc-----------cCCCeEEEEEc-CCCCEEEEEeC
Q 009715 274 RWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKS-----------YYGALLCCAWS-MDGKYILTGGE 341 (528)
Q Consensus 274 ~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~-----------~~~~v~~l~~s-p~g~~l~sg~~ 341 (528)
.+..|. .+..++|+|||++|+++ .++.|++||+...+.. .+.. |...+..++|+ |||++|++++
T Consensus 240 ~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~- 315 (1045)
T 1k32_A 240 KHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS- 315 (1045)
T ss_dssp ECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-
T ss_pred EecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-
Confidence 122222 45677999999999888 4899999999654443 4443 33468999999 9999999887
Q ss_pred CCcEEEEECCCCeEEEEeecCCC-CeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEE-EEEccCCeEEEEeecCCC
Q 009715 342 DDLVQVWSMEDRKVVAWGEGHNS-WVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLL-LWDLEMDEIVVPLRRGPL 419 (528)
Q Consensus 342 dg~v~vwd~~~~~~~~~~~~h~~-~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~-lwd~~~~~~~~~~~~~~~ 419 (528)
++.|.+|++..++... +..|.. .+..++|+ || ..|+.++.+..|. +||+..++......+...
T Consensus 316 ~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s--------dg------~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~ 380 (1045)
T 1k32_A 316 RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD--------TK------VAFIHGTREGDFLGIYDYRTGKAEKFEENLGN 380 (1045)
T ss_dssp TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS--------SE------EEEEEEETTEEEEEEEETTTCCEEECCCCCCS
T ss_pred cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc--------CC------CeEEEEECCCceEEEEECCCCCceEecCCccc
Confidence 7899999998876544 556777 78888885 55 5788888888898 999988765543322234
Q ss_pred CCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEECCC----------eE
Q 009715 420 GGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCREG----------HI 487 (528)
Q Consensus 420 ~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg----------~i 487 (528)
...+.|++++ ..+..+..+..+.+||+.+.+......+|...+.+++|+||+ |++++.++ .|
T Consensus 381 ~~~~~~SpDG------~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i 454 (1045)
T 1k32_A 381 VFAMGVDRNG------KFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI 454 (1045)
T ss_dssp EEEEEECTTS------SEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred eeeeEECCCC------CEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeE
Confidence 5567888887 445566667789999999988887777899999999999985 77776654 89
Q ss_pred EEEeCCCCccc-cCCCccce--EEEccCCceEEEeeee
Q 009715 488 KIWMRPGVAES-QSSSSETV--LSTSSKDKPLLSSKVV 522 (528)
Q Consensus 488 ~iW~~~~~~~~-~~~~~~~v--l~~spd~~~l~s~~~~ 522 (528)
++||+.++... ...+...+ ++|+|||++|++++..
T Consensus 455 ~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 455 HVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp EEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESC
T ss_pred EEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecc
Confidence 99999876633 23444444 8899999999987653
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=4.7e-20 Score=181.37 Aligned_cols=294 Identities=13% Similarity=0.137 Sum_probs=189.7
Q ss_pred CeEEEE-ecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCC-ceEEEEEcCCCCCC
Q 009715 169 HDLLIG-LNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHAD-GNLYVYEKSKDGAG 246 (528)
Q Consensus 169 ~~l~~g-~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~d-g~v~vwd~~~~~~~ 246 (528)
..++++ ..++.|++||+.... ........ .+...+.+++|+|+++ +|++++.+ +.|++|++......
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~---~~~~~~~~-------~~~~~~~~~~~spdg~-~l~~~~~~~~~v~~~~~~~~~~~ 73 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEG---ALTLTQVV-------DVPGQVQPMVVSPDKR-YLYVGVRPEFRVLAYRIAPDDGA 73 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTS---CEEEEEEE-------ECSSCCCCEEECTTSS-EEEEEETTTTEEEEEEECTTTCC
T ss_pred EEEEEeCCCCCeEEEEEECCCC---cEEEeeeE-------ecCCCCceEEECCCCC-EEEEeecCCCeEEEEEecCCCCc
Confidence 345444 779999999986310 00111111 1666889999999999 77777766 99999999732110
Q ss_pred CCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeC-CCcEEEEec---CCceEEeeecccCC
Q 009715 247 DSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGR-DGYLRVFDY---SKEQLICGGKSYYG 322 (528)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~-dg~i~vwd~---~~~~~~~~~~~~~~ 322 (528)
...+..+..+ ..+..++|+|++++|++++. ++.|.+||+ ...+.+..+.. ..
T Consensus 74 ----------------------~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~ 129 (343)
T 1ri6_A 74 ----------------------LTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LD 129 (343)
T ss_dssp ----------------------EEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CT
T ss_pred ----------------------eeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CC
Confidence 0112223323 37889999999998877765 888999999 44445555543 34
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCcEEEEECCC-CeEEE----Eeec-CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe
Q 009715 323 ALLCCAWSMDGKYILTGG-EDDLVQVWSMED-RKVVA----WGEG-HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG 395 (528)
Q Consensus 323 ~v~~l~~sp~g~~l~sg~-~dg~v~vwd~~~-~~~~~----~~~~-h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s 395 (528)
.+.+++|+|++++|++++ .++.|++||+.+ ++... .+.. ....+..++|+| ||+ ++++++.
T Consensus 130 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------dg~-----~l~~~~~ 197 (343)
T 1ri6_A 130 GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP-------NEQ-----YAYCVNE 197 (343)
T ss_dssp TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECT-------TSS-----EEEEEET
T ss_pred CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECC-------CCC-----EEEEEeC
Confidence 588999999999888877 899999999987 65432 2232 345788999999 882 3445556
Q ss_pred CCCeEEEEEccC--CeE--EEEeecCCC-------CCCCeecCCCCCccCCceeeeecCCCCceeeecC----CCCceEE
Q 009715 396 QDTRLLLWDLEM--DEI--VVPLRRGPL-------GGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVP----KLSPLVA 460 (528)
Q Consensus 396 ~D~~i~lwd~~~--~~~--~~~~~~~~~-------~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~----~~~~~~~ 460 (528)
.++.|.+||+.. ++. ...+...+. ...++|++++. ..+.....++.+.+||+. ..+.+..
T Consensus 198 ~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~-----~l~v~~~~~~~i~v~d~~~~~~~~~~~~~ 272 (343)
T 1ri6_A 198 LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGR-----HLYACDRTASLITVFSVSEDGSVLSKEGF 272 (343)
T ss_dssp TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSS-----EEEEEETTTTEEEEEEECTTSCCEEEEEE
T ss_pred CCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCC-----EEEEEecCCCEEEEEEEcCCCCceEEeee
Confidence 899999999953 432 222221111 11367777662 122244467788999987 3345555
Q ss_pred eecCCCCeEEEEEeCCe--EEEEE-CCCeEEEEeCC--CCcccc-----CCCccceEEEccCCce
Q 009715 461 HRVHTEPLSGLIFTQES--VLTVC-REGHIKIWMRP--GVAESQ-----SSSSETVLSTSSKDKP 515 (528)
Q Consensus 461 ~~~h~~~V~~l~~s~d~--l~t~s-~Dg~i~iW~~~--~~~~~~-----~~~~~~vl~~spd~~~ 515 (528)
+..+.. +.+++|+|++ |++++ .|+.|.+|++. ++.... .+....-++|.|+.+.
T Consensus 273 ~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 273 QPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEGG 336 (343)
T ss_dssp EECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC--
T ss_pred ecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEcccCC
Confidence 555544 8899999975 66666 68999999654 433211 1122223777766554
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=7.7e-21 Score=182.42 Aligned_cols=246 Identities=14% Similarity=0.099 Sum_probs=171.6
Q ss_pred ecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCcccccc
Q 009715 175 LNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIK 254 (528)
Q Consensus 175 ~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~ 254 (528)
..++.|++||+.... ..... .|...|.+++|+|+++ +|++++ ++.|++||+...+..
T Consensus 19 ~~~~~i~~~d~~~~~------~~~~~-------~~~~~v~~~~~spdg~-~l~~~~-~~~i~~~d~~~~~~~-------- 75 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRK------MRVVW-------QTPELFEAPNWSPDGK-YLLLNS-EGLLYRLSLAGDPSP-------- 75 (297)
T ss_dssp CCCEEEEEEETTTTE------EEEEE-------EESSCCEEEEECTTSS-EEEEEE-TTEEEEEESSSCCSC--------
T ss_pred CcceeEEEEeCCCCc------eeeec-------cCCcceEeeEECCCCC-EEEEEc-CCeEEEEeCCCCCCc--------
Confidence 457899999987621 11111 1778899999999999 788876 789999998751111
Q ss_pred ccceeEEeccCCCCCCCeEEEeec-CCCeEEEEECCCCCEEEEEe--CCCc--EEEEecCCceEEeeecccCCCeEEEEE
Q 009715 255 DQTQFSVAHPRYSKSNPIARWHIC-QGSINSIAFSTDGTYLATVG--RDGY--LRVFDYSKEQLICGGKSYYGALLCCAW 329 (528)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~spdg~~l~s~~--~dg~--i~vwd~~~~~~~~~~~~~~~~v~~l~~ 329 (528)
......| ...|.+++|+||+++|++++ .++. |.++++.+++. ..+.. ...+..++|
T Consensus 76 -----------------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~-~~~~~~~~~ 136 (297)
T 2ojh_A 76 -----------------EKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTK-NLPSYWHGW 136 (297)
T ss_dssp -----------------EECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCS-SSSEEEEEE
T ss_pred -----------------eEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEeec-CCCccceEE
Confidence 1111122 35688999999999999998 3344 44555555543 33333 335889999
Q ss_pred cCCCCEEE-EEeCCCcEEEEECCC-CeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe-CCCeEEEEEcc
Q 009715 330 SMDGKYIL-TGGEDDLVQVWSMED-RKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG-QDTRLLLWDLE 406 (528)
Q Consensus 330 sp~g~~l~-sg~~dg~v~vwd~~~-~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s-~D~~i~lwd~~ 406 (528)
+|++++|+ ++..|+.++||+++. ......+..|...+.+++|+| || ..|+.++ .|+.+++|++.
T Consensus 137 spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~-------dg------~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 137 SPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSP-------DG------RWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp CTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECT-------TS------SEEEEEECTTSSCEEEEEE
T ss_pred CCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECC-------CC------CEEEEEecCCCCccEEEEC
Confidence 99999887 777899999998642 233455667888999999999 88 4555544 68999999886
Q ss_pred C-CeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEEC
Q 009715 407 M-DEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCR 483 (528)
Q Consensus 407 ~-~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~ 483 (528)
. +.... .+..|...+..++|+|++ |++++.
T Consensus 204 ~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 204 VDGSSVE-----------------------------------------------RITDSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp TTSSCEE-----------------------------------------------ECCCCSEEEEEEEECTTSSEEEEEEE
T ss_pred CCCCCcE-----------------------------------------------EEecCCcccCCeEECCCCCEEEEEEc
Confidence 2 22221 223355678899999985 777776
Q ss_pred C-----------CeEEEEeCCCCccccC----CCccce--EEEccCCceEEEeeee
Q 009715 484 E-----------GHIKIWMRPGVAESQS----SSSETV--LSTSSKDKPLLSSKVV 522 (528)
Q Consensus 484 D-----------g~i~iW~~~~~~~~~~----~~~~~v--l~~spd~~~l~s~~~~ 522 (528)
| +.|++||+.+++.... .+...+ ++|+||+++|++++.+
T Consensus 237 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 237 DADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp ETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred CCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 5 5699999987653221 344445 8899999999988665
No 140
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=2.9e-20 Score=189.84 Aligned_cols=220 Identities=12% Similarity=0.088 Sum_probs=159.4
Q ss_pred cCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEEC
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFS 288 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 288 (528)
....++.+++++++. ++++++.|+ |+||+........ . ......... ...+... ..+...|.+++|+
T Consensus 35 ~~~~~n~lavs~~~~-~l~~~~~dg-v~v~~~~~~~~~~-~--~~~~~~~~~-------~~~~~~~-~~~~~~v~~l~~s 101 (434)
T 2oit_A 35 PKERSSLLAVSNKYG-LVFAGGASG-LQIFPTKNLLIQN-K--PGDDPNKIV-------DKVQGLL-VPMKFPIHHLALS 101 (434)
T ss_dssp CCSCCBCEEEETTTT-EEEEEETTE-EEEEEHHHHCCCC-C--TTCCTTCEE-------ECCCCEE-ECCSSCEEEEEEC
T ss_pred CCCCccEEEEecCCC-EEEEECCCE-EEEEEchHhhhhc-c--cccCccccc-------ccCcccc-ccCCCcccEEEEc
Confidence 445689999999998 899999888 8998864310000 0 000000000 0011111 1245789999999
Q ss_pred CCCCEEE----EEeCCCcEEEEecCCc--------e---EEeeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCC
Q 009715 289 TDGTYLA----TVGRDGYLRVFDYSKE--------Q---LICGGKSYYGALLCCAWSMD-GKYILTGGEDDLVQVWSMED 352 (528)
Q Consensus 289 pdg~~l~----s~~~dg~i~vwd~~~~--------~---~~~~~~~~~~~v~~l~~sp~-g~~l~sg~~dg~v~vwd~~~ 352 (528)
|++++|+ +++.|+.|++||+.++ + .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||+++
T Consensus 102 pdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~ 181 (434)
T 2oit_A 102 CDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTE 181 (434)
T ss_dssp TTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESS
T ss_pred CCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCC
Confidence 9999999 7788999999998754 1 24566778999999999997 88999999999999999999
Q ss_pred CeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCc
Q 009715 353 RKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSA 432 (528)
Q Consensus 353 ~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 432 (528)
+..+....+|...|.+++|+| +| .+|++++.|+.|++||++ ++....+.....
T Consensus 182 ~~~~~~~~~~~~~v~~v~wsp-------dg------~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~------------- 234 (434)
T 2oit_A 182 TVKVCATLPSTVAVTSVCWSP-------KG------KQLAVGKQNGTVVQYLPT-LQEKKVIPCPPF------------- 234 (434)
T ss_dssp SEEEEEEECGGGCEEEEEECT-------TS------SCEEEEETTSCEEEECTT-CCEEEEECCCTT-------------
T ss_pred CcceeeccCCCCceeEEEEcC-------CC------CEEEEEcCCCcEEEEccC-CcccccccCCcc-------------
Confidence 887777778999999999999 98 689999999999999998 554444432100
Q ss_pred cCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--E-EEEECCCe------EEEEeCCCC
Q 009715 433 HWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--V-LTVCREGH------IKIWMRPGV 495 (528)
Q Consensus 433 ~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l-~t~s~Dg~------i~iW~~~~~ 495 (528)
....|...|.+++|+++. + +....||. +++|++...
T Consensus 235 ---------------------------~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 235 ---------------------------YESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp ---------------------------CCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ---------------------------cCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 001244578999999975 2 33445543 999998765
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.85 E-value=2.2e-19 Score=176.20 Aligned_cols=261 Identities=9% Similarity=0.046 Sum_probs=183.7
Q ss_pred EEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEE
Q 009715 216 VTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLA 295 (528)
Q Consensus 216 l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~ 295 (528)
..|.+++..+++++..++.|++||+.+. +.+..+..+...+ .++|+|++++|+
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~--------------------------~~~~~~~~~~~~~-~~~~s~dg~~l~ 55 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTL--------------------------EILNQITLGYDFV-DTAITSDCSNVV 55 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTC--------------------------CEEEEEECCCCEE-EEEECSSSCEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCccc--------------------------ceeeeEEccCCcc-eEEEcCCCCEEE
Confidence 3466666657888899999999998752 2233334444566 999999999777
Q ss_pred EEeC-CCcEEEEecCCceE-EeeecccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEECCCCeEEEEeecCCCCeEEEE
Q 009715 296 TVGR-DGYLRVFDYSKEQL-ICGGKSYYGALLCCAWSMDGKYILTGGEDD---LVQVWSMEDRKVVAWGEGHNSWVSGVA 370 (528)
Q Consensus 296 s~~~-dg~i~vwd~~~~~~-~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg---~v~vwd~~~~~~~~~~~~h~~~V~~v~ 370 (528)
+++. ++.|.+||+.+++. ...+..+..+..+++|+|++++|+++..++ .|.+||+++++.+..+.. ...+.+++
T Consensus 56 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~ 134 (331)
T 3u4y_A 56 VTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIA 134 (331)
T ss_dssp EEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEE
T ss_pred EEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceE
Confidence 7665 88999999998887 666666666665599999999999655553 899999999998888764 45579999
Q ss_pred EecCCCCCCCCCCccceeEEEEEEeCCCe-EEEEEccCCeEE-----EEeecCCCCCCCeecCCCCCccCCceeeeecCC
Q 009715 371 FDSYWSQPNSDGTAETVMYRFGSVGQDTR-LLLWDLEMDEIV-----VPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQ 444 (528)
Q Consensus 371 f~p~~~~~~~dg~~~~~~~~l~s~s~D~~-i~lwd~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~ 444 (528)
|+| ||+ +++++...++. |.+|++.....+ ..+........+.|++++. ..+.....+
T Consensus 135 ~sp-------dg~-----~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~-----~l~v~~~~~ 197 (331)
T 3u4y_A 135 ISP-------NGN-----GLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGN-----FAFVANLIG 197 (331)
T ss_dssp ECT-------TSS-----CEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSS-----EEEEEETTT
T ss_pred ECC-------CCC-----EEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCC-----EEEEEeCCC
Confidence 999 983 35556666688 999998754432 2222223345567777763 123444457
Q ss_pred CCceeeecCCCCc---eEEeecCCCCeEEEEEeCCe--EE-EEECCCeEEEEeCCCCcccc------C--CCccc-----
Q 009715 445 PAPSMRDVPKLSP---LVAHRVHTEPLSGLIFTQES--VL-TVCREGHIKIWMRPGVAESQ------S--SSSET----- 505 (528)
Q Consensus 445 ~~~~~~d~~~~~~---~~~~~~h~~~V~~l~~s~d~--l~-t~s~Dg~i~iW~~~~~~~~~------~--~~~~~----- 505 (528)
+.+.+||+...+. +..+..+ ..+..++|+||+ |+ +...++.|.+||+.+++... . .....
T Consensus 198 ~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (331)
T 3u4y_A 198 NSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGAN 276 (331)
T ss_dssp TEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCC
T ss_pred CeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCccccc
Confidence 7899999988887 7666644 667899999985 44 44467889999998766411 1 11111
Q ss_pred eEEEccCCceEEEeeee
Q 009715 506 VLSTSSKDKPLLSSKVV 522 (528)
Q Consensus 506 vl~~spd~~~l~s~~~~ 522 (528)
-++|+|||++|+++...
T Consensus 277 ~~~~spdg~~l~v~~~~ 293 (331)
T 3u4y_A 277 QMALNKTETKLFISANI 293 (331)
T ss_dssp CEEECTTSSEEEEEETT
T ss_pred ceEECCCCCEEEEecCC
Confidence 17999999999766544
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=3.2e-20 Score=202.92 Aligned_cols=288 Identities=12% Similarity=0.041 Sum_probs=188.1
Q ss_pred CCceeEEEEeeCCCcEEEEEeC-Cc-----eEEEEEcCCCCCCCCcccccccc---ceeEEeccCCCCCCCeEEEeecCC
Q 009715 210 NSRCTSVTWVPGGDGAFVVGHA-DG-----NLYVYEKSKDGAGDSSFPVIKDQ---TQFSVAHPRYSKSNPIARWHICQG 280 (528)
Q Consensus 210 ~~~v~~l~~~p~g~~~l~tg~~-dg-----~v~vwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~h~~ 280 (528)
...+.+++|+|||+ +|++++. |+ .|++||+..+. ....+...... ..+... .........+. ...
T Consensus 36 ~~~~~~~~~SpdG~-~la~~~~~d~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~ 109 (741)
T 2ecf_A 36 GPTLMKPKVAPDGS-RVTFLRGKDSDRNQLDLWSYDIGSGQ-TRLLVDSKVVLPGTETLSDE---EKARRERQRIA-AMT 109 (741)
T ss_dssp CCCCEEEEECTTSS-EEEEEECCSSCTTEEEEEEEETTTCC-EEEEECGGGTC------------------------CCE
T ss_pred CCCCCCceEecCCC-EEEEEeccCCCCcccEEEEEECCCCc-eeEccchhhcccccccccch---hhhhhhhhhhc-ccc
Confidence 55799999999999 8888887 88 99999987632 11111110000 000000 00000000000 013
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEecCCce--EEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q 009715 281 SINSIAFSTDGTYLATVGRDGYLRVFDYSKEQ--LICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAW 358 (528)
Q Consensus 281 ~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~ 358 (528)
.|.+++|+|||++|++++. +.|++||+.+++ .+..+..+...+..++|+|||++|+.++ ++.|++||+.+++....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence 4788999999999999987 899999999872 3445666778899999999999999987 46899999999887665
Q ss_pred eecCCCC----------------eEEEEEecCCCCCCCCCCccceeEEEEEEeCCC------------------------
Q 009715 359 GEGHNSW----------------VSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT------------------------ 398 (528)
Q Consensus 359 ~~~h~~~----------------V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~------------------------ 398 (528)
...+... +..++|+| || .+|++++.|+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-------Dg------~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~ 254 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAP-------DD------SAIAYARIDESPVPVQKRYEVYADRTDVIEQRYP 254 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECT-------TS------SCEEEEEEECTTSCEEEEEEECSSCEEEEEEECC
T ss_pred ccCCccceeccccceeeeeccccccceEECC-------CC------CEEEEEEEcCCCCceEecCCCCCCcccceEeecC
Confidence 5544432 47899999 99 5788877665
Q ss_pred ---------eEEEEEccC-CeEEEEeec---CCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCC
Q 009715 399 ---------RLLLWDLEM-DEIVVPLRR---GPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHT 465 (528)
Q Consensus 399 ---------~i~lwd~~~-~~~~~~~~~---~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~ 465 (528)
.|++||+.+ ++....... ...+..+.| +++........ .-...+..+.+||+.+.+....+..|.
T Consensus 255 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~-~~~~~~~~i~~~d~~~g~~~~~~~~~~ 332 (741)
T 2ecf_A 255 AAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQ-SRDQKKLDLVEVTLASNQQRVLAHETS 332 (741)
T ss_dssp BTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEE-ETTSSEEEEEEEETTTCCEEEEEEEEC
T ss_pred CCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEe-cccCCeEEEEEEECCCCceEEEEEcCC
Confidence 889999988 775443321 122345667 77631110000 001124567889998888777666655
Q ss_pred C----CeEEEEEeCCe--EEEEECCCeEEEEeCC--CCccccCCCccce---EEEccCCceEEEee
Q 009715 466 E----PLSGLIFTQES--VLTVCREGHIKIWMRP--GVAESQSSSSETV---LSTSSKDKPLLSSK 520 (528)
Q Consensus 466 ~----~V~~l~~s~d~--l~t~s~Dg~i~iW~~~--~~~~~~~~~~~~v---l~~spd~~~l~s~~ 520 (528)
. .+..++|+||+ +++++.||.++||.+. ++......+...+ ++|+||+++|+...
T Consensus 333 ~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~ 398 (741)
T 2ecf_A 333 PTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRA 398 (741)
T ss_dssp SSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEE
T ss_pred CCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEE
Confidence 3 45689999986 7788889988888765 3322233444444 36999999886543
No 143
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=1.1e-19 Score=185.67 Aligned_cols=213 Identities=10% Similarity=-0.004 Sum_probs=150.9
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccc--cceeeeeeecc-CCcccCCceeEEEEeeCCCcEEE----EEeCCceEEE
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVG--KKLVGAHHYNK-DGSVNNSRCTSVTWVPGGDGAFV----VGHADGNLYV 237 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~--~~~~~~~~~~~-~~~~h~~~v~~l~~~p~g~~~l~----tg~~dg~v~v 237 (528)
++++..++++..+| |.+|+......... ........+.. ....+...|++++|+|+++ +|+ +|+.|+.|+|
T Consensus 45 s~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~lav~~~sgs~d~~v~i 122 (434)
T 2oit_A 45 SNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNL-TLSACMMSSEYGSIIAF 122 (434)
T ss_dssp ETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSC-EEEEEEEETTTEEEEEE
T ss_pred ecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCC-EEEEEEeccCCCceEEE
Confidence 67788889988887 89988764211000 00000000000 0012567899999999999 777 7888999999
Q ss_pred EEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC-CCEEEEEeCCCcEEEEecCCceEEee
Q 009715 238 YEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD-GTYLATVGRDGYLRVFDYSKEQLICG 316 (528)
Q Consensus 238 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd-g~~l~s~~~dg~i~vwd~~~~~~~~~ 316 (528)
||+.......... . .....+..+.+|...|.+++|+|+ +.+|++++.||.|++||+++++.+..
T Consensus 123 wd~~~~~~~~~~~-----~----------~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~ 187 (434)
T 2oit_A 123 FDVRTFSNEAKQQ-----K----------RPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCA 187 (434)
T ss_dssp EEHHHHHCTTCSS-----C----------CCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEE
T ss_pred EEccccccCCcCC-----c----------ceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceee
Confidence 9986521000000 0 000123445668899999999997 89999999999999999999887766
Q ss_pred ecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecC-------CCCeEEEEEecCCCCCCCCCCccceeE
Q 009715 317 GKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGH-------NSWVSGVAFDSYWSQPNSDGTAETVMY 389 (528)
Q Consensus 317 ~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h-------~~~V~~v~f~p~~~~~~~dg~~~~~~~ 389 (528)
...|...|.+++|+|+|++|++|+.|+.|++||++ ++....+..| ...|.+++|++ ++ .
T Consensus 188 ~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~-------~~------~ 253 (434)
T 2oit_A 188 TLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG-------TY------V 253 (434)
T ss_dssp EECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE-------TT------E
T ss_pred ccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec-------Cc------e
Confidence 77788999999999999999999999999999998 5555555433 33899999998 77 4
Q ss_pred EEEE-EeCCC------eEEEEEccCC
Q 009715 390 RFGS-VGQDT------RLLLWDLEMD 408 (528)
Q Consensus 390 ~l~s-~s~D~------~i~lwd~~~~ 408 (528)
++++ ...|| .+++||++..
T Consensus 254 ~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 254 FAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEEccCCCccCCCCceEEEEeccC
Confidence 4433 44443 3899999865
No 144
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.83 E-value=5.1e-18 Score=167.71 Aligned_cols=228 Identities=11% Similarity=0.075 Sum_probs=157.8
Q ss_pred CccEEEEeCCCcEEE--EeCCCCCCC---CCCCCeEEEEe-cCCcEEEEEccccccccccceeeeeeeccCC---cccCC
Q 009715 141 KGTYIIFNVGDAIFI--SDLNSQDKD---AKDGHDLLIGL-NSGDVYSVSLRQQLQDVGKKLVGAHHYNKDG---SVNNS 211 (528)
Q Consensus 141 ~g~~~~~~~~~~i~v--~~~~~~~~~---~~~~~~l~~g~-~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~---~~h~~ 211 (528)
++.+..|+......+ +........ +++++.++++. .++.|.+||+.+.. . .......... .....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~-----~-~~~~~~~~~~~~~~~~~~ 141 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGE-----V-KGRLVLDDRKRTEEVRPL 141 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCC-----E-EEEEESCCCCCCSSCCCC
T ss_pred CccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCe-----e-EEEEecCCCccccccCCC
Confidence 556777765543222 222222111 78888776554 47899999987621 1 1111110000 00112
Q ss_pred ceeEEEEeeCCCcEEEEEe--CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC
Q 009715 212 RCTSVTWVPGGDGAFVVGH--ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST 289 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~--~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 289 (528)
.+.+++|+|+++ +++++. .++.|.+||..+. +.+..+..+...+.+++|+|
T Consensus 142 ~~~~~~~s~dg~-~l~~~~~~~~~~i~~~d~~~~--------------------------~~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 142 QPRELVADDATN-TVYISGIGKESVIWVVDGGNI--------------------------KLKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp EEEEEEEETTTT-EEEEEEESSSCEEEEEETTTT--------------------------EEEEEECCCCTTCCCCEEET
T ss_pred CCceEEECCCCC-EEEEEecCCCceEEEEcCCCC--------------------------ceEEEecCCCCccceEEECC
Confidence 378899999999 555554 5789999998752 12233333345578899999
Q ss_pred CCCEEEEEeCCCcEEEEecCCceEEeeecc----cCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCeEEEEeecCCC
Q 009715 290 DGTYLATVGRDGYLRVFDYSKEQLICGGKS----YYGALLCCAWSMDGKYILTGGE-DDLVQVWSMEDRKVVAWGEGHNS 364 (528)
Q Consensus 290 dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~l~~sp~g~~l~sg~~-dg~v~vwd~~~~~~~~~~~~h~~ 364 (528)
++++|++++.++.|.+||+.+++.+..+.. +...+..++|+|+++++++++. ++.|.+||+.+++.+..+....
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~- 273 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE- 273 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS-
T ss_pred CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-
Confidence 999999999999999999999988876653 4556788999999997776665 5899999999999888777433
Q ss_pred CeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEee
Q 009715 365 WVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLR 415 (528)
Q Consensus 365 ~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 415 (528)
...++|+| ||+ .++++...++.|.+||+.+++.+..+.
T Consensus 274 -~~~~~~s~-------dg~-----~l~v~~~~~~~v~~~d~~~~~~~~~~~ 311 (353)
T 3vgz_A 274 -SLAVLFNP-------ARN-----EAYVTHRQAGKVSVIDAKSYKVVKTFD 311 (353)
T ss_dssp -CCCEEEET-------TTT-----EEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred -CceEEECC-------CCC-----EEEEEECCCCeEEEEECCCCeEEEEEe
Confidence 25799999 883 355666689999999999988776554
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=4.7e-19 Score=169.86 Aligned_cols=219 Identities=16% Similarity=0.146 Sum_probs=153.0
Q ss_pred CCCccEEEEeCCCcE--EEEeCCCCCCC---CCCCCeEEEEecCCcEEEEEccc-cccccccceeeeeeeccCCcccCCc
Q 009715 139 DGKGTYIIFNVGDAI--FISDLNSQDKD---AKDGHDLLIGLNSGDVYSVSLRQ-QLQDVGKKLVGAHHYNKDGSVNNSR 212 (528)
Q Consensus 139 ~~~g~~~~~~~~~~i--~v~~~~~~~~~---~~~~~~l~~g~~~G~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~h~~~ 212 (528)
..++.+.+|+..... .+......... +|+++.|+++. ++.|++||+.. ... . .... ..+...
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~------~---~~~~--~~~~~~ 86 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP------E---KVDT--GFATIC 86 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC------E---ECCC--TTCCCB
T ss_pred CcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc------e---Eecc--cccccc
Confidence 347888888876543 22222211111 89999999876 78999999875 211 0 0000 113467
Q ss_pred eeEEEEeeCCCcEEEEEe--CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 213 CTSVTWVPGGDGAFVVGH--ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 213 v~~l~~~p~g~~~l~tg~--~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
+.+++|+|+++ +|++++ .++.+.||.++..+.. ...+..+ ..+..++|+||
T Consensus 87 ~~~~~~spdg~-~l~~~~~~~~~~~~l~~~~~~~~~-------------------------~~~~~~~-~~~~~~~~spd 139 (297)
T 2ojh_A 87 NNDHGISPDGA-LYAISDKVEFGKSAIYLLPSTGGT-------------------------PRLMTKN-LPSYWHGWSPD 139 (297)
T ss_dssp CSCCEECTTSS-EEEEEECTTTSSCEEEEEETTCCC-------------------------CEECCSS-SSEEEEEECTT
T ss_pred ccceEECCCCC-EEEEEEeCCCCcceEEEEECCCCc-------------------------eEEeecC-CCccceEECCC
Confidence 89999999999 888888 4456666666432211 1111111 34888999999
Q ss_pred CCEEE-EEeCCCcEEEEec--CCceEEeeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECC-CCeEEEEeecCCCC
Q 009715 291 GTYLA-TVGRDGYLRVFDY--SKEQLICGGKSYYGALLCCAWSMDGKYILTGG-EDDLVQVWSME-DRKVVAWGEGHNSW 365 (528)
Q Consensus 291 g~~l~-s~~~dg~i~vwd~--~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~-~dg~v~vwd~~-~~~~~~~~~~h~~~ 365 (528)
+++|+ ++..++.+++|++ .+++. ..+..+...+.+++|+|++++|+.++ .++.++||+++ .+..+..+..|...
T Consensus 140 g~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 218 (297)
T 2ojh_A 140 GKSFTYCGIRDQVFDIYSMDIDSGVE-TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYG 218 (297)
T ss_dssp SSEEEEEEEETTEEEEEEEETTTCCE-EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEE
T ss_pred CCEEEEEECCCCceEEEEEECCCCcc-eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcc
Confidence 99887 6778999999985 34443 45556778899999999999888766 58999999986 45667777788889
Q ss_pred eEEEEEecCCCCCCCCCCccceeEEEEEEeCC-----------CeEEEEEccCCeE
Q 009715 366 VSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD-----------TRLLLWDLEMDEI 410 (528)
Q Consensus 366 V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D-----------~~i~lwd~~~~~~ 410 (528)
+..++|+| || .+|+.++.+ ..|.+||+.+++.
T Consensus 219 ~~~~~~s~-------dg------~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 219 DWFPHPSP-------SG------DKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEEECT-------TS------SEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred cCCeEECC-------CC------CEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 99999999 98 567776655 5699999877653
No 146
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.83 E-value=1.2e-18 Score=170.82 Aligned_cols=265 Identities=11% Similarity=0.028 Sum_probs=168.6
Q ss_pred CeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCC-ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCC
Q 009715 169 HDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNS-RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGD 247 (528)
Q Consensus 169 ~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~ 247 (528)
+.|+++..++.|++||+.+. +. ...... .+.. .+..++|+|+++.+++++..++.|.+||+.+..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~-----~~-~~~~~~-----~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--- 67 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM-----AV-DKVITI-----ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--- 67 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT-----EE-EEEEEC-----TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC---
T ss_pred cEEEEcCCCCeEEEEECCCC-----cE-EEEEEc-----CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC---
Confidence 46888999999999998762 11 111110 0111 478899999998456667778999999987521
Q ss_pred CccccccccceeEEeccCCCCCCCeEEEee-----cCCCeEEEEECCCCCEEEEEe------------CCCcEEEEecCC
Q 009715 248 SSFPVIKDQTQFSVAHPRYSKSNPIARWHI-----CQGSINSIAFSTDGTYLATVG------------RDGYLRVFDYSK 310 (528)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~spdg~~l~s~~------------~dg~i~vwd~~~ 310 (528)
.+..+.. |...+.+++|+|++++|+++. .++.|.+||+.+
T Consensus 68 -----------------------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~ 124 (337)
T 1pby_B 68 -----------------------TLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET 124 (337)
T ss_dssp -----------------------EEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT
T ss_pred -----------------------eEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCC
Confidence 1111111 112567899999999999886 579999999999
Q ss_pred ceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEE
Q 009715 311 EQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYR 390 (528)
Q Consensus 311 ~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~ 390 (528)
++.+..+.. ...+.+++|+|++++|+++ ++.|++||+++++.+..+..+.. ...+.|+| ||. .
T Consensus 125 ~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~-------dg~------~ 187 (337)
T 1pby_B 125 LSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQP-------DVL------A 187 (337)
T ss_dssp TEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT-TTTTBCCC-------BCC------C
T ss_pred CcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc-CCCceeCC-------Ccc------E
Confidence 988777654 4567889999999988888 68899999999988776654331 11225566 551 1
Q ss_pred EEEEe-CCC-----------------------eEEEE--EccCCeEEEEe-ecCCCCCCCeecCCCCCccCCceeeeecC
Q 009715 391 FGSVG-QDT-----------------------RLLLW--DLEMDEIVVPL-RRGPLGGSPTFSTGSQSAHWDNVCPVGTL 443 (528)
Q Consensus 391 l~s~s-~D~-----------------------~i~lw--d~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~d~~~~~g~~ 443 (528)
++..+ .++ .|.+| +-..-. ...+ ........+.|++++. .+.+.
T Consensus 188 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~------~l~~~-- 258 (337)
T 1pby_B 188 VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKT------RAFGA-- 258 (337)
T ss_dssp CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSS------EEEEE--
T ss_pred EeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCC------EEEEe--
Confidence 11111 111 12222 000000 1111 1111223355666552 22222
Q ss_pred CCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCcc
Q 009715 444 QPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAE 497 (528)
Q Consensus 444 ~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~ 497 (528)
++.+.+||+...+.+..+..+ ..+.+++|+|++ |++++.|+.|++||+.+++.
T Consensus 259 ~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 259 YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcE
Confidence 466777887777666665543 457899999974 78888999999999987653
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=4.8e-18 Score=166.51 Aligned_cols=257 Identities=12% Similarity=0.009 Sum_probs=180.4
Q ss_pred EEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCC--CeEEEEECCCCCEEEE-EeCCC
Q 009715 225 AFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQG--SINSIAFSTDGTYLAT-VGRDG 301 (528)
Q Consensus 225 ~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~l~~spdg~~l~s-~~~dg 301 (528)
+|++++.++.|++||+.+. +.+..+..... .+..++|+|+++++++ +..++
T Consensus 3 ~~v~~~~~~~v~~~d~~~~--------------------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~ 56 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKM--------------------------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSE 56 (337)
T ss_dssp EEEEEETTTEEEEEETTTT--------------------------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTT
T ss_pred EEEEcCCCCeEEEEECCCC--------------------------cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCC
Confidence 7899999999999998752 11222221111 4788999999987654 55678
Q ss_pred cEEEEecCCceEEeeecc-c----CCCeEEEEEcCCCCEEEEEe------------CCCcEEEEECCCCeEEEEeecCCC
Q 009715 302 YLRVFDYSKEQLICGGKS-Y----YGALLCCAWSMDGKYILTGG------------EDDLVQVWSMEDRKVVAWGEGHNS 364 (528)
Q Consensus 302 ~i~vwd~~~~~~~~~~~~-~----~~~v~~l~~sp~g~~l~sg~------------~dg~v~vwd~~~~~~~~~~~~h~~ 364 (528)
.|.+||+.+++.+..+.. + ...+..++|+|+|++|+++. .++.|.+||+.+++.+..+.. ..
T Consensus 57 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~ 135 (337)
T 1pby_B 57 SLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PR 135 (337)
T ss_dssp EEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CS
T ss_pred eEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CC
Confidence 999999999988766542 1 12577899999999998886 579999999999988877764 55
Q ss_pred CeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCcc----CCcee--
Q 009715 365 WVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAH----WDNVC-- 438 (528)
Q Consensus 365 ~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~----~d~~~-- 438 (528)
.+.+++|+| || .+|+++ ++.|.+||+.+++.+..+..........+++++.... .+..+
T Consensus 136 ~~~~~~~s~-------dg------~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 200 (337)
T 1pby_B 136 QITMLAWAR-------DG------SKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMAT 200 (337)
T ss_dssp SCCCEEECT-------TS------SCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEE
T ss_pred CcceeEECC-------CC------CEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceee
Confidence 688899999 98 456665 6899999999999887776544334556777664111 11110
Q ss_pred --eeecCCC----------CceeeecCCCCce-EEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCccccC---
Q 009715 439 --PVGTLQP----------APSMRDVPKLSPL-VAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAESQS--- 500 (528)
Q Consensus 439 --~~g~~~~----------~~~~~d~~~~~~~-~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~~~--- 500 (528)
....... .+.+||....+.. ..+..+...+.+++|+||+ |+++ |+.|++||+.+++....
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~ 278 (337)
T 1pby_B 201 PFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL 278 (337)
T ss_dssp EEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC
T ss_pred eeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC
Confidence 1111111 3578888877654 3344567788999999985 6655 79999999987653222
Q ss_pred CCccceEEEccCCceEEEeeeeccc
Q 009715 501 SSSETVLSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 501 ~~~~~vl~~spd~~~l~s~~~~gs~ 525 (528)
.+...-++|+|||++|+++..++.+
T Consensus 279 ~~~~~~~~~s~dg~~l~~~~~~~~i 303 (337)
T 1pby_B 279 PHSYYSVNVSTDGSTVWLGGALGDL 303 (337)
T ss_dssp SSCCCEEEECTTSCEEEEESBSSEE
T ss_pred CCceeeEEECCCCCEEEEEcCCCcE
Confidence 2222338999999999887655443
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.82 E-value=1.4e-18 Score=188.75 Aligned_cols=284 Identities=10% Similarity=0.075 Sum_probs=180.0
Q ss_pred CCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcE--EEEeCCCCCCC---CCCCCeEEEEecCCcEEEEE
Q 009715 110 GGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAI--FISDLNSQDKD---AKDGHDLLIGLNSGDVYSVS 184 (528)
Q Consensus 110 ~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i--~v~~~~~~~~~---~~~~~~l~~g~~~G~v~iwd 184 (528)
..+.+++|+|. +.++++ . ++.+++|+..... .+......... +||++.|++. .++.|++||
T Consensus 82 ~~v~~~~~spd-~~~~~~-~-----------~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~ 147 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-T-----------QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIAR 147 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-E-----------TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEE
T ss_pred cCceeEEECCC-CeEEEE-E-----------CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEe
Confidence 45778888873 322222 1 3667777664432 22221111111 8999999884 789999999
Q ss_pred ccc-----cccccccceeeeeee---cc--CCcccCCceeEEEEeeCCCcEEEEEe------------------------
Q 009715 185 LRQ-----QLQDVGKKLVGAHHY---NK--DGSVNNSRCTSVTWVPGGDGAFVVGH------------------------ 230 (528)
Q Consensus 185 ~~~-----~~~~~~~~~~~~~~~---~~--~~~~h~~~v~~l~~~p~g~~~l~tg~------------------------ 230 (528)
+.. .... .+...... .. ....+...+.+++|+|||+ +|++++
T Consensus 148 ~~~~~~~~g~~~---~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 223 (706)
T 2z3z_A 148 GGKLGEGMSRAI---AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS-CLAFYRMDQSMVKPTPIVDYHPLEAESKPL 223 (706)
T ss_dssp CBCTTSCCCCCE---ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS-EEEEEEEECTTSCCEEEEECCSSSCEEEEE
T ss_pred cCcccccCCCcE---EeccCCCCCeEcccchhhhhcCCCceEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCceEEe
Confidence 875 2110 00000000 00 0000123368999999999 788876
Q ss_pred ---------CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCC
Q 009715 231 ---------ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDG 301 (528)
Q Consensus 231 ---------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg 301 (528)
.+..|++||+...... . +.....|...+.+++|+|||++|++++.++
T Consensus 224 ~y~~~g~~~~~~~l~~~d~~~~~~~-~-----------------------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 279 (706)
T 2z3z_A 224 YYPMAGTPSHHVTVGIYHLATGKTV-Y-----------------------LQTGEPKEKFLTNLSWSPDENILYVAEVNR 279 (706)
T ss_dssp CCCBTTSCCCEEEEEEEETTTTEEE-E-----------------------CCCCSCTTCEEEEEEECTTSSEEEEEEECT
T ss_pred eCCCCCCCCCeeEEEEEECCCCceE-e-----------------------eccCCCCceeEeeEEEECCCCEEEEEEeCC
Confidence 4467888888642100 0 000012456789999999999999988776
Q ss_pred -----cEEEEecCCc-eEEeeecc-cC---CCeEEEEEcC--CCCEEEEEeCCCcEEEEECC-CCeEEEEeecCCCCeEE
Q 009715 302 -----YLRVFDYSKE-QLICGGKS-YY---GALLCCAWSM--DGKYILTGGEDDLVQVWSME-DRKVVAWGEGHNSWVSG 368 (528)
Q Consensus 302 -----~i~vwd~~~~-~~~~~~~~-~~---~~v~~l~~sp--~g~~l~sg~~dg~v~vwd~~-~~~~~~~~~~h~~~V~~ 368 (528)
.|++||+.++ +....... +. ..+..++|+| ||++++++..|+.++||+++ +++.+..+..|...+..
T Consensus 280 ~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~ 359 (706)
T 2z3z_A 280 AQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTN 359 (706)
T ss_dssp TSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEE
T ss_pred CCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEe
Confidence 8999999988 43332222 22 2346789999 99999999999999999886 57777888888888877
Q ss_pred -EEEecCCCCCCCCCCccceeEEEEEEeCCC----eEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecC
Q 009715 369 -VAFDSYWSQPNSDGTAETVMYRFGSVGQDT----RLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTL 443 (528)
Q Consensus 369 -v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~----~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~ 443 (528)
++|+| ||+ .+++++..++ .|..||+.+++. ..+
T Consensus 360 ~~~~sp-------dg~-----~l~~~~~~~~~~~~~l~~~d~~~~~~-~~l----------------------------- 397 (706)
T 2z3z_A 360 FAGFDP-------KGT-----RLYFESTEASPLERHFYCIDIKGGKT-KDL----------------------------- 397 (706)
T ss_dssp EEEECT-------TSS-----EEEEEESSSCTTCBEEEEEETTCCCC-EES-----------------------------
T ss_pred eeEEcC-------CCC-----EEEEEecCCCCceEEEEEEEcCCCCc-eec-----------------------------
Confidence 79999 883 3445555554 566666655431 111
Q ss_pred CCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEEC-C---CeEEEEeCCCCc
Q 009715 444 QPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCR-E---GHIKIWMRPGVA 496 (528)
Q Consensus 444 ~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~-D---g~i~iW~~~~~~ 496 (528)
.|...+.+++|+||+ |+..+. + +.|++||+.+++
T Consensus 398 -------------------~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 398 -------------------TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp -------------------CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred -------------------cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 145568899999985 555433 3 569999987764
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.82 E-value=9.6e-20 Score=198.53 Aligned_cols=262 Identities=11% Similarity=0.077 Sum_probs=182.4
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCC---CeEEEEEC
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQG---SINSIAFS 288 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~s 288 (528)
.+.+++|+|+|+ ++++ +.||+|++||+.++. ....+..|.. .|.+++||
T Consensus 18 ~~~~~~~spdg~-~~~~-~~dg~i~~~d~~~g~--------------------------~~~~~~~~~~~~~~v~~~~~S 69 (723)
T 1xfd_A 18 HDPEAKWISDTE-FIYR-EQKGTVRLWNVETNT--------------------------STVLIEGKKIESLRAIRYEIS 69 (723)
T ss_dssp CCCCCCBSSSSC-BCCC-CSSSCEEEBCGGGCC--------------------------CEEEECTTTTTTTTCSEEEEC
T ss_pred cccccEEcCCCc-EEEE-eCCCCEEEEECCCCc--------------------------EEEEeccccccccccceEEEC
Confidence 467899999999 6766 789999999997631 2223333333 48999999
Q ss_pred CCCCEEEEEeCC---------CcEEEEecCCceEE--eeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 009715 289 TDGTYLATVGRD---------GYLRVFDYSKEQLI--CGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVA 357 (528)
Q Consensus 289 pdg~~l~s~~~d---------g~i~vwd~~~~~~~--~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~ 357 (528)
|||++|++++.+ +.|++||+.+++.. .....|...+..++|||||++|+.++. +.|++||+.+++...
T Consensus 70 pDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~ 148 (723)
T 1xfd_A 70 PDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIR 148 (723)
T ss_dssp TTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEE
T ss_pred CCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEE
Confidence 999999999875 77889999988752 222334445889999999999999886 799999999988766
Q ss_pred EeecCCCCe------------------EEEEEecCCCCCCCCCCccceeEEEEEEeCCC---------------------
Q 009715 358 WGEGHNSWV------------------SGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT--------------------- 398 (528)
Q Consensus 358 ~~~~h~~~V------------------~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~--------------------- 398 (528)
....+...+ .+++|+| || .+|++++.|.
T Consensus 149 ~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-------Dg------~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (723)
T 1xfd_A 149 VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-------DG------TRLAYAAINDSRVPIMELPTYTGSIYPTVKP 215 (723)
T ss_dssp EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-------TS------SEEEEEEEECTTSCEEEECCCSSSSSCCCEE
T ss_pred EecCCCCCceECcccceeEEEEeccCcceEEECC-------CC------CEEEEEEECCCccceEEeeccCCcCCCccee
Confidence 655444333 7899999 99 5777776543
Q ss_pred -------------eEEEEEccCCeEEEEeecC-------CCCCCCeecCCCCCccCCceeeee----cCCCCceeeecCC
Q 009715 399 -------------RLLLWDLEMDEIVVPLRRG-------PLGGSPTFSTGSQSAHWDNVCPVG----TLQPAPSMRDVPK 454 (528)
Q Consensus 399 -------------~i~lwd~~~~~~~~~~~~~-------~~~~~~~~s~~~~~~~~d~~~~~g----~~~~~~~~~d~~~ 454 (528)
.|++||+.+++....+... ..+..+.|++++.. +... ..+..+.+||+.+
T Consensus 216 ~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~------l~~~~~~~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 216 YHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKV------AVTWLNRAQNVSILTLCDATT 289 (723)
T ss_dssp EECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEE------EEEEEETTSCEEEEEEEETTT
T ss_pred ccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeE------EEEEEcCCCCeEEEEEEeCCC
Confidence 7999999988765555432 12345788888742 1111 1234678899988
Q ss_pred CCceEEeec-CCCCeE----EEEEeCCe--EEE--EECCC------eEEEEe-CCCCc---cccC-CCccce---EEEcc
Q 009715 455 LSPLVAHRV-HTEPLS----GLIFTQES--VLT--VCREG------HIKIWM-RPGVA---ESQS-SSSETV---LSTSS 511 (528)
Q Consensus 455 ~~~~~~~~~-h~~~V~----~l~~s~d~--l~t--~s~Dg------~i~iW~-~~~~~---~~~~-~~~~~v---l~~sp 511 (528)
.+....+.. |...+. .++|+||+ |+. ...|+ .|.+|| ..++. .... .....+ ++|+|
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~sp 369 (723)
T 1xfd_A 290 GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDE 369 (723)
T ss_dssp CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEET
T ss_pred CcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcC
Confidence 876665544 344443 78999985 553 55677 577777 44443 2222 222222 68999
Q ss_pred CCceEEEeee
Q 009715 512 KDKPLLSSKV 521 (528)
Q Consensus 512 d~~~l~s~~~ 521 (528)
||++|+....
T Consensus 370 dg~~l~~~~~ 379 (723)
T 1xfd_A 370 KGNKIYFLST 379 (723)
T ss_dssp TTTEEEEEES
T ss_pred CCCEEEEEEc
Confidence 9999976543
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=7.4e-18 Score=166.62 Aligned_cols=243 Identities=9% Similarity=0.075 Sum_probs=165.9
Q ss_pred cCCceeEEEEeeCCCcEEEEEeC--CceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEE
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHA--DGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIA 286 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 286 (528)
+...+..++|+|+|+ +++++.. ++.|++|++..+. ...+..+..+...+..++
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~------------------------~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQT------------------------AHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTE------------------------EEEEEEEEEESCCCSEEE
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCc------------------------EEEeeeeecCCCCCEEEE
Confidence 445678899999998 6666543 7899999995311 112233344567888999
Q ss_pred ECCCCCEEEEEe-CCCcEEEEecC-Cc--eEEeeecc---------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC-C
Q 009715 287 FSTDGTYLATVG-RDGYLRVFDYS-KE--QLICGGKS---------YYGALLCCAWSMDGKYILTGGEDDLVQVWSME-D 352 (528)
Q Consensus 287 ~spdg~~l~s~~-~dg~i~vwd~~-~~--~~~~~~~~---------~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~-~ 352 (528)
|+|||++|++++ .++.|.+|++. ++ +.+..+.. +...+.+++|+|+|+++++...++.|.+|++. +
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC
Confidence 999999988888 77899999996 23 33333321 11247889999999966666678899999998 4
Q ss_pred CeEE--EEeec-CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC--CeEE--EEeecCCC------
Q 009715 353 RKVV--AWGEG-HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM--DEIV--VPLRRGPL------ 419 (528)
Q Consensus 353 ~~~~--~~~~~-h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~--~~~~--~~~~~~~~------ 419 (528)
++.. ..+.. ....+..++|+| ||+ .++++...++.|.+||+.. ++.. ..+.....
T Consensus 173 g~~~~~~~~~~~~g~~p~~~~~sp-------dg~-----~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (347)
T 3hfq_A 173 GQLSEQSVLTMEAGFGPRHLVFSP-------DGQ-----YAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHN 240 (347)
T ss_dssp SCEEEEEEEECCTTCCEEEEEECT-------TSS-----EEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCC
T ss_pred CcEEEeeeEEcCCCCCCceEEECC-------CCC-----EEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCC
Confidence 5432 22222 234678899999 993 3555567889999999884 5432 22222111
Q ss_pred -CCCCeecCCCCCccCCceeeeecCCCCceeeecC---CCCceEEeecCCCCeEEEEEeCCe--EEEEEC-CCeEEEEeC
Q 009715 420 -GGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVP---KLSPLVAHRVHTEPLSGLIFTQES--VLTVCR-EGHIKIWMR 492 (528)
Q Consensus 420 -~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~---~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~-Dg~i~iW~~ 492 (528)
...++|++++.. .+.....++.+.+|++. ..+.+..+..+...+..++|+||+ |++++. ++.|.+|++
T Consensus 241 ~~~~i~~spdG~~-----l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 241 GAAAIRLSHDGHF-----LYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp EEEEEEECTTSCE-----EEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cceeEEECCCCCE-----EEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence 234678887731 22334456778899986 335566666677778999999985 777765 489999965
Q ss_pred C
Q 009715 493 P 493 (528)
Q Consensus 493 ~ 493 (528)
.
T Consensus 316 d 316 (347)
T 3hfq_A 316 D 316 (347)
T ss_dssp C
T ss_pred e
Confidence 4
No 151
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.82 E-value=1.4e-17 Score=163.61 Aligned_cols=283 Identities=13% Similarity=0.099 Sum_probs=177.0
Q ss_pred CCccEEEEeCC---CcEEEEeCCC--CCCC---CCCCCeEEEEecC-CcEEEEEccccccccccceeeeeeeccCCcccC
Q 009715 140 GKGTYIIFNVG---DAIFISDLNS--QDKD---AKDGHDLLIGLNS-GDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNN 210 (528)
Q Consensus 140 ~~g~~~~~~~~---~~i~v~~~~~--~~~~---~~~~~~l~~g~~~-G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~ 210 (528)
.++.+.+|+.. ....+..+.. .... +++++.|+++..+ +.|.+|++.... ++ ......+. ..
T Consensus 13 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~---~~-~~~~~~~~-----~~ 83 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD---GA-LTFAAESA-----LP 83 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTT---CC-EEEEEEEE-----CS
T ss_pred CCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCC---Cc-eeeccccc-----cC
Confidence 46777777663 2122222221 1111 8999999888886 999999997210 00 11001111 22
Q ss_pred CceeEEEEeeCCCcEEEEE-eCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC
Q 009715 211 SRCTSVTWVPGGDGAFVVG-HADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST 289 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg-~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 289 (528)
..+.+++|+|+++ +|+++ ..++.|.+|++. .+... ..+..+.. ...+.+++|+|
T Consensus 84 ~~~~~~~~s~dg~-~l~~~~~~~~~i~~~d~~-~~~~~----------------------~~~~~~~~-~~~~~~~~~s~ 138 (343)
T 1ri6_A 84 GSLTHISTDHQGQ-FVFVGSYNAGNVSVTRLE-DGLPV----------------------GVVDVVEG-LDGCHSANISP 138 (343)
T ss_dssp SCCSEEEECTTSS-EEEEEETTTTEEEEEEEE-TTEEE----------------------EEEEEECC-CTTBCCCEECT
T ss_pred CCCcEEEEcCCCC-EEEEEecCCCeEEEEECC-CCccc----------------------cccccccC-CCCceEEEECC
Confidence 3788999999999 56555 458999999985 22100 11112222 24588999999
Q ss_pred CCCEEEEEe-CCCcEEEEecCC-ceEEe----eecc-cCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCC--CeE--EE
Q 009715 290 DGTYLATVG-RDGYLRVFDYSK-EQLIC----GGKS-YYGALLCCAWSMDGKYILTGG-EDDLVQVWSMED--RKV--VA 357 (528)
Q Consensus 290 dg~~l~s~~-~dg~i~vwd~~~-~~~~~----~~~~-~~~~v~~l~~sp~g~~l~sg~-~dg~v~vwd~~~--~~~--~~ 357 (528)
++++|++++ .++.|++||+.+ ++... .+.. ....+..++|+|+++++++++ .++.|.+||++. ++. ..
T Consensus 139 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~ 218 (343)
T 1ri6_A 139 DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQ 218 (343)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEE
T ss_pred CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEe
Confidence 999888887 889999999987 65432 2222 335788999999999776554 789999999954 432 22
Q ss_pred Eee----cC--CCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc--C--CeEEEEeecCCCCCCCeecC
Q 009715 358 WGE----GH--NSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE--M--DEIVVPLRRGPLGGSPTFST 427 (528)
Q Consensus 358 ~~~----~h--~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~--~--~~~~~~~~~~~~~~~~~~s~ 427 (528)
.+. ++ ...+..++|+| ||+ .++++...|+.|.+||+. . .+.+..+........++|++
T Consensus 219 ~~~~~~~~~~~~~~~~~i~~s~-------dg~-----~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~ 286 (343)
T 1ri6_A 219 TLDMMPENFSDTRWAADIHITP-------DGR-----HLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDH 286 (343)
T ss_dssp EEECSCTTCCSCCCEEEEEECT-------TSS-----EEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECT
T ss_pred eccccCccccccCCccceEECC-------CCC-----EEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECC
Confidence 222 11 34677899999 883 344566689999999998 2 34455555444577788888
Q ss_pred CCCCccCCceeeeec-CCCCceeeecC--CC--CceEEeecCCCCeEEEEEeC
Q 009715 428 GSQSAHWDNVCPVGT-LQPAPSMRDVP--KL--SPLVAHRVHTEPLSGLIFTQ 475 (528)
Q Consensus 428 ~~~~~~~d~~~~~g~-~~~~~~~~d~~--~~--~~~~~~~~h~~~V~~l~~s~ 475 (528)
++. .+.+.. .++.+.+|++. +. +.+..+... ....+++|.+
T Consensus 287 dg~------~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~~ 332 (343)
T 1ri6_A 287 SGK------YLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVNA 332 (343)
T ss_dssp TSS------EEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEEE
T ss_pred CCC------EEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEEc
Confidence 763 333333 56778888543 33 233333332 3344666655
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=1.1e-18 Score=190.11 Aligned_cols=294 Identities=11% Similarity=0.044 Sum_probs=189.2
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccC---CceeEEEEeeCCCcEEEEEeC---------C
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNN---SRCTSVTWVPGGDGAFVVGHA---------D 232 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~l~~~p~g~~~l~tg~~---------d 232 (528)
++++. ++....+|.|++||+.... ... +.. .|. ..+.+++|+|||+ +|+.++. +
T Consensus 24 s~dg~-~~~~~~d~~i~~~~~~~g~-----~~~----~~~---~~~~~~~~~~~~~~SpDg~-~la~~~~~~~~~~~s~~ 89 (719)
T 1z68_A 24 ISGQE-YLHQSADNNIVLYNIETGQ-----SYT----ILS---NRTMKSVNASNYGLSPDRQ-FVYLESDYSKLWRYSYT 89 (719)
T ss_dssp SSSSE-EEEECTTSCEEEEESSSCC-----EEE----EEC---HHHHHTTTCSEEEECTTSS-EEEEEEEEEECSSSCEE
T ss_pred CCCCe-EEEEcCCCCEEEEEcCCCc-----EEE----EEc---cccccccceeeEEECCCCC-eEEEEecCceeEEeecc
Confidence 46663 4444568899999987621 110 000 021 2489999999999 7887765 7
Q ss_pred ceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCce
Q 009715 233 GNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQ 312 (528)
Q Consensus 233 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~ 312 (528)
+.|++||+..+.. ... ..+ ...+..++|||||++|+.+. ++.|++||+.+++
T Consensus 90 ~~i~~~d~~~g~~-~~~--------------------~~l------~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~ 141 (719)
T 1z68_A 90 ATYYIYDLSNGEF-VRG--------------------NEL------PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDP 141 (719)
T ss_dssp EEEEEEETTTTEE-CCS--------------------SCC------CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSC
T ss_pred eEEEEEECCCCcc-ccc--------------------eec------CcccccceECCCCCEEEEEE-CCeEEEEeCCCCC
Confidence 8999999975321 000 000 14577899999999999986 7899999998887
Q ss_pred EEeee-cccCCCe-----------------EEEEEcCCCCEEEEEeCCC-------------------------------
Q 009715 313 LICGG-KSYYGAL-----------------LCCAWSMDGKYILTGGEDD------------------------------- 343 (528)
Q Consensus 313 ~~~~~-~~~~~~v-----------------~~l~~sp~g~~l~sg~~dg------------------------------- 343 (528)
..... .++...+ .+++|+|||++|++++.|.
T Consensus 142 ~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~ 221 (719)
T 1z68_A 142 PFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKN 221 (719)
T ss_dssp CEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCC
T ss_pred cEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCC
Confidence 65432 2222222 4899999999999887652
Q ss_pred ---cEEEEECCCCeEE--------EEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC----CeEEEEE----
Q 009715 344 ---LVQVWSMEDRKVV--------AWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD----TRLLLWD---- 404 (528)
Q Consensus 344 ---~v~vwd~~~~~~~--------~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D----~~i~lwd---- 404 (528)
.|++||+.+++.. ..+.+|...+..++|+| |+ .++++.... ..|.+||
T Consensus 222 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-------D~------~~~~~~~~~~~~~~~l~~~d~~~~ 288 (719)
T 1z68_A 222 PVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT-------DE------RVCLQWLKRVQNVSVLSICDFRED 288 (719)
T ss_dssp CEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS-------SS------EEEEEEEESSTTEEEEEEEEECSS
T ss_pred CeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeC-------CC------eEEEEEeccccCeEEEEEEcccCC
Confidence 7889999987642 12346888999999999 98 666664422 3488899
Q ss_pred ccCCeEEEEee----c-CCCCC-----CCeecCCCCCccCCceeeeecCCC--CceeeecCCCCceEEeecCCCCeEEEE
Q 009715 405 LEMDEIVVPLR----R-GPLGG-----SPTFSTGSQSAHWDNVCPVGTLQP--APSMRDVPKLSPLVAHRVHTEPLSGLI 472 (528)
Q Consensus 405 ~~~~~~~~~~~----~-~~~~~-----~~~~s~~~~~~~~d~~~~~g~~~~--~~~~~d~~~~~~~~~~~~h~~~V~~l~ 472 (528)
+.++++...+. . ...+. .+.|++++.... +.....++ .+.+||+...+ ...+..+...|..+.
T Consensus 289 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~----~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~ 363 (719)
T 1z68_A 289 WQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYY----KIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIF 363 (719)
T ss_dssp SSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEE----EEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEE
T ss_pred CCCCceEEEEecccccCCceEccccCCccEECCCCCeEE----EEEEccCCceEEEEEECCCCc-eEecccCceEEEEEE
Confidence 77777665552 2 12233 678888874211 11111222 35556665554 445555666788877
Q ss_pred EeCCe--EEEEEC-----CCeEEEEeCCC--Cc---cccCC----Cccce--EEEccCCceEEEe
Q 009715 473 FTQES--VLTVCR-----EGHIKIWMRPG--VA---ESQSS----SSETV--LSTSSKDKPLLSS 519 (528)
Q Consensus 473 ~s~d~--l~t~s~-----Dg~i~iW~~~~--~~---~~~~~----~~~~v--l~~spd~~~l~s~ 519 (528)
+. ++ |+..+. ++.+++|.+.. +. ..... +...+ ++|+||+++|+..
T Consensus 364 ~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~ 427 (719)
T 1z68_A 364 RV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALV 427 (719)
T ss_dssp EE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEE
T ss_pred EE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEE
Confidence 77 53 555554 48899998754 21 11111 33333 7889999988754
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.80 E-value=2e-18 Score=183.37 Aligned_cols=248 Identities=12% Similarity=0.095 Sum_probs=169.3
Q ss_pred CCCCCeEEEEec-CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeC---CceEEEEEc
Q 009715 165 AKDGHDLLIGLN-SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHA---DGNLYVYEK 240 (528)
Q Consensus 165 ~~~~~~l~~g~~-~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~---dg~v~vwd~ 240 (528)
++||+.|+.++. +|.+.||++.... .. .+. ..+...+..++|+|+ + +++++.. +...++|.+
T Consensus 30 ~~DG~~la~~s~~~g~~~lw~~~~g~------~~---~lt---~~~~~~~~~~~~spd-~-~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 30 VVDGDKLLVVGFSEGSVNAYLYDGGE------TV---KLN---REPINSVLDPHYGVG-R-VILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp EETTTEEEEEEEETTEEEEEEEETTE------EE---ECC---SSCCSEECEECTTCS-E-EEEEEECSTTSCCEEEEEE
T ss_pred CCCCCeEEEEEccCCceeEEEEcCCC------cE---eee---cccccccccccCCCC-e-EEEEeccCCCCcceEEEEE
Confidence 478999988776 9999999975411 11 111 113357999999999 5 7887775 555677666
Q ss_pred CC--CCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCE-EEEEeCCCcEEEEecCCceEEeee
Q 009715 241 SK--DGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTY-LATVGRDGYLRVFDYSKEQLICGG 317 (528)
Q Consensus 241 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~-l~s~~~dg~i~vwd~~~~~~~~~~ 317 (528)
+. .+... .+. . ...+...+|+||++. +++...++.+.+||+.+++.....
T Consensus 96 ~~~~~g~~~-~l~-------------------------~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~ 148 (582)
T 3o4h_A 96 NTSRPGEEQ-RLE-------------------------A-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA 148 (582)
T ss_dssp ETTSTTCCE-ECT-------------------------T-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE
T ss_pred eccCCCccc-ccc-------------------------C-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee
Confidence 54 33211 110 0 123445678887753 333344455669999988776554
Q ss_pred cccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEE
Q 009715 318 KSYYGALLCCAWSMDGKYILTGGED----DLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGS 393 (528)
Q Consensus 318 ~~~~~~v~~l~~sp~g~~l~sg~~d----g~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s 393 (528)
..+ . .+++|+|||++|++++.| ..|++||+.+++.. .+..|...+..++|+| || ++|++
T Consensus 149 ~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~Sp-------DG------~~l~~ 211 (582)
T 3o4h_A 149 RLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISP-------GM------KVTAG 211 (582)
T ss_dssp EES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECT-------TS------CEEEE
T ss_pred cCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECC-------CC------CEEEE
Confidence 433 3 789999999999988776 78999999988765 5677889999999999 99 67888
Q ss_pred EeCCC--eEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCe---
Q 009715 394 VGQDT--RLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPL--- 468 (528)
Q Consensus 394 ~s~D~--~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V--- 468 (528)
+..++ .|++||+.+++.. .+.. |...+
T Consensus 212 ~~~~~~~~i~~~d~~~~~~~-~~~~-----------------------------------------------~~~~~~~~ 243 (582)
T 3o4h_A 212 LETAREARLVTVDPRDGSVE-DLEL-----------------------------------------------PSKDFSSY 243 (582)
T ss_dssp EECSSCEEEEEECTTTCCEE-ECCC-----------------------------------------------SCSHHHHH
T ss_pred ccCCCeeEEEEEcCCCCcEE-EccC-----------------------------------------------CCcChhhh
Confidence 88888 8999999988765 3321 22222
Q ss_pred -----EEEEEeCCe--EEEEECCCeEEEEeCCCCccccCCCccce--EEEccCCceEEEeeee
Q 009715 469 -----SGLIFTQES--VLTVCREGHIKIWMRPGVAESQSSSSETV--LSTSSKDKPLLSSKVV 522 (528)
Q Consensus 469 -----~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~~~~~~~~v--l~~spd~~~l~s~~~~ 522 (528)
....|+||+ +++++.|+.+++|++ + +... ...+.+ ++++ |++.+++++..
T Consensus 244 ~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~-g-~~~~-~~~~~v~~~~~s-dg~~l~~~s~~ 302 (582)
T 3o4h_A 244 RPTAITWLGYLPDGRLAVVARREGRSAVFID-G-ERVE-APQGNHGRVVLW-RGKLVTSHTSL 302 (582)
T ss_dssp CCSEEEEEEECTTSCEEEEEEETTEEEEEET-T-EEEC-CCSSEEEEEEEE-TTEEEEEEEET
T ss_pred hhccccceeEcCCCcEEEEEEcCCcEEEEEE-C-Ceec-cCCCceEEEEec-CCEEEEEEcCC
Confidence 334489985 778888999999999 3 3222 222344 7778 88888776543
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.77 E-value=2.7e-16 Score=156.35 Aligned_cols=271 Identities=14% Similarity=0.176 Sum_probs=172.9
Q ss_pred CCeEEEEec----CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCC----ceEEEEE
Q 009715 168 GHDLLIGLN----SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHAD----GNLYVYE 239 (528)
Q Consensus 168 ~~~l~~g~~----~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~d----g~v~vwd 239 (528)
...+++|+. ++.|++|++.... + .+.....+ +...+..++|+|+|+ +|++++.+ +.|.+|+
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~---g-~~~~~~~~------~~~~p~~l~~spdg~-~l~~~~~~~~~~~~v~~~~ 81 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEET---G-ESLPLSDA------EVANPSYLIPSADGK-FVYSVNEFSKDQAAVSAFA 81 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTT---C-CEEEEEEE------ECSCCCSEEECTTSS-EEEEEECCSSTTCEEEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCC---C-CEEEeecc------cCCCCceEEECCCCC-EEEEEEccCCCCCcEEEEE
Confidence 446667753 4689999876411 1 11111111 455678899999999 78888775 8999999
Q ss_pred cCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEe-CCCcEEEEecCCceEEeee-
Q 009715 240 KSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVG-RDGYLRVFDYSKEQLICGG- 317 (528)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~-~dg~i~vwd~~~~~~~~~~- 317 (528)
+...... ...+.....+...+..+++ ++++|++++ .++.|.+|++.....+..+
T Consensus 82 ~~~~~g~----------------------~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~ 137 (361)
T 3scy_A 82 FDKEKGT----------------------LHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPAS 137 (361)
T ss_dssp EETTTTE----------------------EEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCS
T ss_pred EeCCCCc----------------------EEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccc
Confidence 8753110 0112222333456777888 888877776 5789999999754322211
Q ss_pred -----cc--------cCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCe-------E------EEEeecCCCCeEEEE
Q 009715 318 -----KS--------YYGALLCCAWSMDGKYILTGG-EDDLVQVWSMEDRK-------V------VAWGEGHNSWVSGVA 370 (528)
Q Consensus 318 -----~~--------~~~~v~~l~~sp~g~~l~sg~-~dg~v~vwd~~~~~-------~------~~~~~~h~~~V~~v~ 370 (528)
.+ +...+.+++|+|+|++|++++ .++.|.+|+++... . ......+...+..++
T Consensus 138 ~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 217 (361)
T 3scy_A 138 DVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLI 217 (361)
T ss_dssp EEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEE
T ss_pred eeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEE
Confidence 11 122357899999999776655 48899999887533 1 111223556688999
Q ss_pred EecCCCCCCCCCCccceeEEEEEEe-CCCeEEEEEccCCeEE--EEeecCC----CCCCCeecCCCCCccCCceeee-ec
Q 009715 371 FDSYWSQPNSDGTAETVMYRFGSVG-QDTRLLLWDLEMDEIV--VPLRRGP----LGGSPTFSTGSQSAHWDNVCPV-GT 442 (528)
Q Consensus 371 f~p~~~~~~~dg~~~~~~~~l~s~s-~D~~i~lwd~~~~~~~--~~~~~~~----~~~~~~~s~~~~~~~~d~~~~~-g~ 442 (528)
|+| || .+++.++ .++.|.+||+.+++.. ..+.... ....++|++++. .+.+ ..
T Consensus 218 ~sp-------dg------~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~------~l~v~~~ 278 (361)
T 3scy_A 218 FNS-------DG------KFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGK------YLYASNR 278 (361)
T ss_dssp ECT-------TS------SEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSS------EEEEEEC
T ss_pred EcC-------CC------CEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCC------EEEEECC
Confidence 999 99 4555555 7899999999977652 2232211 123677888873 2323 23
Q ss_pred C-CCCceeeecC--CCC--ceEEeecCCCCeEEEEEeCCe--EEEEE-CCCeEEEEeCC
Q 009715 443 L-QPAPSMRDVP--KLS--PLVAHRVHTEPLSGLIFTQES--VLTVC-REGHIKIWMRP 493 (528)
Q Consensus 443 ~-~~~~~~~d~~--~~~--~~~~~~~h~~~V~~l~~s~d~--l~t~s-~Dg~i~iW~~~ 493 (528)
. +..+.+|++. ..+ .+..+.. ...+.+++|+||+ |++++ .++.|.+|++.
T Consensus 279 ~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 279 LKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp SSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 3 4678888885 233 4444444 5578899999985 77776 67899997654
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.76 E-value=2e-16 Score=156.34 Aligned_cols=256 Identities=12% Similarity=0.140 Sum_probs=160.5
Q ss_pred cCCCCCCCccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCc-E-EEEeCC--C-CCCC---CCCCCeEEEEe-
Q 009715 105 FGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDA-I-FISDLN--S-QDKD---AKDGHDLLIGL- 175 (528)
Q Consensus 105 f~gh~~~v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~-i-~v~~~~--~-~~~~---~~~~~~l~~g~- 175 (528)
...+......++++| ++.+.+++.. ..++.+.+|+.... + .+..+. . .... +++++.|+++.
T Consensus 35 ~~~~~~~p~~~a~sp-dg~l~~~~~~--------~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~ 105 (347)
T 3hfq_A 35 LLAATQNPTYLALSA-KDCLYSVDKE--------DDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANY 105 (347)
T ss_dssp EEEECSCCCCEEECT-TCEEEEEEEE--------TTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEET
T ss_pred eeeccCCcceEEEcc-CCeEEEEEec--------CCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeC
Confidence 345556667777777 4432222211 12466666665322 1 222211 1 1111 78999898887
Q ss_pred cCCcEEEEEccccccccccceeeeeeeccCC-----cccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCcc
Q 009715 176 NSGDVYSVSLRQQLQDVGKKLVGAHHYNKDG-----SVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSF 250 (528)
Q Consensus 176 ~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~-----~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~ 250 (528)
.++.|.+|++.... . ......+...+ ..+...+.+++|+|+|+ ++++...++.|++|++...+...
T Consensus 106 ~~~~v~v~~~~~~g----~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~--- 176 (347)
T 3hfq_A 106 HKGTAEVMKIAADG----A-LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLS--- 176 (347)
T ss_dssp TTTEEEEEEECTTS----C-EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEE---
T ss_pred CCCEEEEEEeCCCC----C-eeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEE---
Confidence 67899999996310 0 00001111110 01334588999999999 88888889999999997422110
Q ss_pred ccccccceeEEeccCCCCCCCeEEEeec-CCCeEEEEECCCCCEEEEE-eCCCcEEEEecCC--ceE--EeeecccC---
Q 009715 251 PVIKDQTQFSVAHPRYSKSNPIARWHIC-QGSINSIAFSTDGTYLATV-GRDGYLRVFDYSK--EQL--ICGGKSYY--- 321 (528)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~spdg~~l~s~-~~dg~i~vwd~~~--~~~--~~~~~~~~--- 321 (528)
.+..+..+ ...+..++|+|||++|+++ ..++.|.+|+++. ++. +..+....
T Consensus 177 --------------------~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 236 (347)
T 3hfq_A 177 --------------------EQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADY 236 (347)
T ss_dssp --------------------EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTC
T ss_pred --------------------EeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCC
Confidence 01111111 2357789999999976664 5678999999874 543 22222222
Q ss_pred ---CCeEEEEEcCCCCEEE-EEeCCCcEEEEECCC---CeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEE
Q 009715 322 ---GALLCCAWSMDGKYIL-TGGEDDLVQVWSMED---RKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSV 394 (528)
Q Consensus 322 ---~~v~~l~~sp~g~~l~-sg~~dg~v~vwd~~~---~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~ 394 (528)
..+..++|+|||++|+ +...++.|.+|++.. .+.+..+..+...+..++|+| || .+|+++
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~sp-------dg------~~l~v~ 303 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDP-------TE------AFVVVV 303 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECT-------TS------SEEEEE
T ss_pred CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECC-------CC------CEEEEE
Confidence 3488899999999874 556689999999973 355666666777899999999 99 556666
Q ss_pred e-CCCeEEEEE--ccCCeEE
Q 009715 395 G-QDTRLLLWD--LEMDEIV 411 (528)
Q Consensus 395 s-~D~~i~lwd--~~~~~~~ 411 (528)
+ .++.|.+|+ ..+++..
T Consensus 304 ~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 304 NQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp ETTTTEEEEEEECTTTCCEE
T ss_pred EcCCCcEEEEEEeCCCCeEE
Confidence 5 458999995 4556554
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.76 E-value=1.1e-17 Score=182.12 Aligned_cols=282 Identities=10% Similarity=0.063 Sum_probs=175.0
Q ss_pred CCCCCeEEEEec---------CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceE
Q 009715 165 AKDGHDLLIGLN---------SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNL 235 (528)
Q Consensus 165 ~~~~~~l~~g~~---------~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v 235 (528)
+|||+.|+++.. ++.|++||+.+... ..... -...+..++|+|||+ .|+.+. |+.|
T Consensus 68 SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~------~~~~~-------l~~~~~~~~~SPDG~-~la~~~-~~~i 132 (719)
T 1z68_A 68 SPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF------VRGNE-------LPRPIQYLCWSPVGS-KLAYVY-QNNI 132 (719)
T ss_dssp CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE------CCSSC-------CCSSBCCEEECSSTT-CEEEEE-TTEE
T ss_pred CCCCCeEEEEecCceeEEeecceEEEEEECCCCcc------cccee-------cCcccccceECCCCC-EEEEEE-CCeE
Confidence 899999998876 78999999976211 00000 124588899999999 777775 7899
Q ss_pred EEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCC---------CeEEEEECCCCCEEEEEeCCC-----
Q 009715 236 YVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQG---------SINSIAFSTDGTYLATVGRDG----- 301 (528)
Q Consensus 236 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~l~~spdg~~l~s~~~dg----- 301 (528)
++|++..+... .+... ......+.+|.. ...+++|+|||++|++++.|.
T Consensus 133 ~~~~~~~g~~~--~l~~~---------------~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~ 195 (719)
T 1z68_A 133 YLKQRPGDPPF--QITFN---------------GRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPV 195 (719)
T ss_dssp EEESSTTSCCE--ECCCC---------------CBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCE
T ss_pred EEEeCCCCCcE--EEecC---------------CCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCce
Confidence 99998753211 11000 000112223322 225899999999999987652
Q ss_pred -----------------------------cEEEEecCCceEE---e-----eecccCCCeEEEEEcCCCCEEEEEeCC--
Q 009715 302 -----------------------------YLRVFDYSKEQLI---C-----GGKSYYGALLCCAWSMDGKYILTGGED-- 342 (528)
Q Consensus 302 -----------------------------~i~vwd~~~~~~~---~-----~~~~~~~~v~~l~~sp~g~~l~sg~~d-- 342 (528)
.|++||+.+++.+ . .+..|...+..++|+||++++++....
T Consensus 196 ~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~ 275 (719)
T 1z68_A 196 IAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQ 275 (719)
T ss_dssp EEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESST
T ss_pred EEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEecccc
Confidence 7889999987642 1 133577789999999998877764432
Q ss_pred --CcEEEEE----CCCCeEEEEe----ecCCCCeE-----EEEEecCCCCCCCCCCccceeEEEEEEeCCC--eEEEEEc
Q 009715 343 --DLVQVWS----MEDRKVVAWG----EGHNSWVS-----GVAFDSYWSQPNSDGTAETVMYRFGSVGQDT--RLLLWDL 405 (528)
Q Consensus 343 --g~v~vwd----~~~~~~~~~~----~~h~~~V~-----~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~--~i~lwd~ 405 (528)
..|.+|| +.++++...+ .+|..++. .+.|+| ||+. .++++...++ .|.+||+
T Consensus 276 ~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-------dg~~----l~~~~~~~~g~~~l~~~~~ 344 (719)
T 1z68_A 276 NVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSY-------DAIS----YYKIFSDKDGYKHIHYIKD 344 (719)
T ss_dssp TEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECT-------TSSC----EEEEEECTTSCEEEEEESS
T ss_pred CeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECC-------CCCe----EEEEEEccCCceEEEEEEC
Confidence 2488999 8888776666 47888887 899999 9820 1233444555 5777787
Q ss_pred cCCeEEEEeecCC-CCCCCeecCCCCCccCCceeeeecC----CCCceeeecCC--CC-ceEEee----cCCCCeEEEEE
Q 009715 406 EMDEIVVPLRRGP-LGGSPTFSTGSQSAHWDNVCPVGTL----QPAPSMRDVPK--LS-PLVAHR----VHTEPLSGLIF 473 (528)
Q Consensus 406 ~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~d~~~~~g~~----~~~~~~~d~~~--~~-~~~~~~----~h~~~V~~l~~ 473 (528)
..++. ..+.... .+..+.+. ++. ..+..... .....+|.+.. .. ....+. +|...+..+.|
T Consensus 345 ~~~~~-~~lt~~~~~v~~~~~~-d~~-----~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~ 417 (719)
T 1z68_A 345 TVENA-IQITSGKWEAINIFRV-TQD-----SLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASF 417 (719)
T ss_dssp CSTTC-EECSCSSSCEEEEEEE-CSS-----EEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEE
T ss_pred CCCce-EecccCceEEEEEEEE-eCC-----EEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEE
Confidence 77663 3333211 11222333 221 11222222 35667777653 21 123333 26677889999
Q ss_pred eCCe--EE-EEECC--CeEEEEeCCCCc
Q 009715 474 TQES--VL-TVCRE--GHIKIWMRPGVA 496 (528)
Q Consensus 474 s~d~--l~-t~s~D--g~i~iW~~~~~~ 496 (528)
+||+ |+ +++.+ ..+.+|++.+++
T Consensus 418 s~dg~~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 418 SDYAKYYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp CGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred CCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence 9974 43 44444 468899886554
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.76 E-value=3.9e-17 Score=160.94 Aligned_cols=158 Identities=16% Similarity=0.081 Sum_probs=116.8
Q ss_pred EEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecC-CCeEEEEECCCCCE
Q 009715 215 SVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQ-GSINSIAFSTDGTY 293 (528)
Q Consensus 215 ~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~spdg~~ 293 (528)
.+++++++. ++++++.++.|++||+.+. +.+..+..+. ..+..++|+|++++
T Consensus 4 g~~~~~~~~-~~v~~~~~~~v~~~d~~~~--------------------------~~~~~~~~~~~~~~~~~~~s~dg~~ 56 (349)
T 1jmx_B 4 GPALKAGHE-YMIVTNYPNNLHVVDVASD--------------------------TVYKSCVMPDKFGPGTAMMAPDNRT 56 (349)
T ss_dssp CCCCCTTCE-EEEEEETTTEEEEEETTTT--------------------------EEEEEEECSSCCSSCEEEECTTSSE
T ss_pred cccccCCCE-EEEEeCCCCeEEEEECCCC--------------------------cEEEEEecCCCCCCceeEECCCCCE
Confidence 346777777 8999999999999998752 1122222221 25778999999986
Q ss_pred EEE-EeCCCcEEEEecCCceEEeeecccC------CCeEEEEEcCCCCEEEEEeCC------------CcEEEEECCCCe
Q 009715 294 LAT-VGRDGYLRVFDYSKEQLICGGKSYY------GALLCCAWSMDGKYILTGGED------------DLVQVWSMEDRK 354 (528)
Q Consensus 294 l~s-~~~dg~i~vwd~~~~~~~~~~~~~~------~~v~~l~~sp~g~~l~sg~~d------------g~v~vwd~~~~~ 354 (528)
+++ ...++.|.+||+.+++.+..+.... ..+..++|+|+|++|++++.+ +.|.+||+.+++
T Consensus 57 ~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 57 AYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred EEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 654 4568899999999998877665322 237789999999999998865 899999998854
Q ss_pred E---EEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 355 V---VAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 355 ~---~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
. +..+. +...+.+++|+| || . ++.++. .|.+||+.+++.+..+..
T Consensus 137 ~~~~~~~~~-~~~~~~~~~~s~-------dg------~-l~~~~~--~i~~~d~~~~~~~~~~~~ 184 (349)
T 1jmx_B 137 EAKPVRTFP-MPRQVYLMRAAD-------DG------S-LYVAGP--DIYKMDVKTGKYTVALPL 184 (349)
T ss_dssp GBCCSEEEE-CCSSCCCEEECT-------TS------C-EEEESS--SEEEECTTTCCEEEEECS
T ss_pred ccceeeecc-CCCcccceeECC-------CC------c-EEEccC--cEEEEeCCCCceeccccc
Confidence 3 33444 444688999999 99 5 444443 499999999998877654
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.74 E-value=8.8e-17 Score=170.67 Aligned_cols=152 Identities=16% Similarity=0.029 Sum_probs=120.9
Q ss_pred eeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCC
Q 009715 213 CTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGT 292 (528)
Q Consensus 213 v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~ 292 (528)
+...+|+|+++.++++...++.+.+||+.++. ...+..+.. .+++|+|||+
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~---------------------------~~~l~~~~~--~~~~~spDG~ 162 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDRVALYALDGGG---------------------------LRELARLPG--FGFVSDIRGD 162 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSCEEEEEEETTE---------------------------EEEEEEESS--CEEEEEEETT
T ss_pred ceeeeeCCCCCeEEEEecCCCCceEEEccCCc---------------------------EEEeecCCC--ceEEECCCCC
Confidence 44679999997655565555666699987521 111111222 7899999999
Q ss_pred EEEEEeCC----CcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCC--cEEEEECCCCeEEEEeecCCCCe
Q 009715 293 YLATVGRD----GYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDD--LVQVWSMEDRKVVAWGEGHNSWV 366 (528)
Q Consensus 293 ~l~s~~~d----g~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg--~v~vwd~~~~~~~~~~~~h~~~V 366 (528)
+|++++.+ ..|++||+.+++.. .+..|.+.+..++|+|||++|+++..++ .|++||+++++.. .+.+|...+
T Consensus 163 ~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~ 240 (582)
T 3o4h_A 163 LIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDF 240 (582)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHH
T ss_pred EEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcCh
Confidence 99988877 78999999988765 4567888899999999999999888888 8999999998887 777888878
Q ss_pred EEEE--------EecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeE
Q 009715 367 SGVA--------FDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEI 410 (528)
Q Consensus 367 ~~v~--------f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~ 410 (528)
..++ |+| || .++++++.|+++++|++ ++.
T Consensus 241 ~~~~~~~~~~~~~sp-------dg------~~~~~~~~~g~~~l~~~--g~~ 277 (582)
T 3o4h_A 241 SSYRPTAITWLGYLP-------DG------RLAVVARREGRSAVFID--GER 277 (582)
T ss_dssp HHHCCSEEEEEEECT-------TS------CEEEEEEETTEEEEEET--TEE
T ss_pred hhhhhccccceeEcC-------CC------cEEEEEEcCCcEEEEEE--CCe
Confidence 7777 999 99 78999999999999999 554
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.73 E-value=9.4e-16 Score=150.97 Aligned_cols=232 Identities=14% Similarity=0.125 Sum_probs=158.0
Q ss_pred eeeeCCCccEEEEeCCCcEEEEeCCCCC--CC-----CCCCCeEEEE-ecCCcEEEEEccccccccccceeeeeeeccCC
Q 009715 135 NTNFDGKGTYIIFNVGDAIFISDLNSQD--KD-----AKDGHDLLIG-LNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDG 206 (528)
Q Consensus 135 ~~~~~~~g~~~~~~~~~~i~v~~~~~~~--~~-----~~~~~~l~~g-~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 206 (528)
.++...++.+.+|+......+..+..+. .. +++++.+++. ..++.|++||+.+.. . ..........
T Consensus 14 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~-----~-~~~~~~~~~~ 87 (349)
T 1jmx_B 14 MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK-----N-TFHANLSSVP 87 (349)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE-----E-EEEEESCCST
T ss_pred EEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc-----E-EEEEEccccc
Confidence 3333457888888876654443333222 12 8899877554 468899999987521 1 1111110000
Q ss_pred cccCCceeEEEEeeCCCcEEEEEeCC------------ceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEE
Q 009715 207 SVNNSRCTSVTWVPGGDGAFVVGHAD------------GNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIAR 274 (528)
Q Consensus 207 ~~h~~~v~~l~~~p~g~~~l~tg~~d------------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (528)
..+...+.+++|+|+|+ +|++++.+ +.|.+||+.+... . ..+..
T Consensus 88 ~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~----------------------~~~~~ 143 (349)
T 1jmx_B 88 GEVGRSMYSFAISPDGK-EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE-A----------------------KPVRT 143 (349)
T ss_dssp TEEEECSSCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG-B----------------------CCSEE
T ss_pred ccccccccceEECCCCC-EEEEEcccccccccccccCCCeEEEEECCCccc-c----------------------ceeee
Confidence 00123478899999999 77777755 8999999875211 0 11122
Q ss_pred EeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccC---------------------------------
Q 009715 275 WHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYY--------------------------------- 321 (528)
Q Consensus 275 ~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--------------------------------- 321 (528)
+.. ...+.+++|+||++ +++++. .|.+||+.+++.+..+..+.
T Consensus 144 ~~~-~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (349)
T 1jmx_B 144 FPM-PRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF 219 (349)
T ss_dssp EEC-CSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC
T ss_pred ccC-CCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeec
Confidence 222 23578899999999 555543 49999999888766543221
Q ss_pred -----------------------------------CCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCC
Q 009715 322 -----------------------------------GALLCCAWSM-DGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSW 365 (528)
Q Consensus 322 -----------------------------------~~v~~l~~sp-~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~ 365 (528)
..+..++|+| ++++++++ ++.|.+||+++++.+..+. ....
T Consensus 220 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~-~~~~ 296 (349)
T 1jmx_B 220 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN-LDHT 296 (349)
T ss_dssp -------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE-CSSC
T ss_pred CCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc-CCCC
Confidence 1345677889 99999888 8899999999999887776 3445
Q ss_pred eEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 366 VSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 366 V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
+.+++|+| || .+|++++.++.|++||+.+++.+..+..
T Consensus 297 ~~~~~~s~-------dg------~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 297 YYCVAFDK-------KG------DKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp CCEEEECS-------SS------SCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred ccceEECC-------CC------CEEEEecCCCeEEEEeccccceeeeeec
Confidence 78999999 88 4666778899999999999998888765
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.73 E-value=6.4e-15 Score=146.33 Aligned_cols=268 Identities=12% Similarity=0.070 Sum_probs=164.3
Q ss_pred CCCCCeEEEEecC----CcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEE-eCCceEEEEE
Q 009715 165 AKDGHDLLIGLNS----GDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVG-HADGNLYVYE 239 (528)
Q Consensus 165 ~~~~~~l~~g~~~----G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg-~~dg~v~vwd 239 (528)
+++++.|+++..+ |.|.+|++.... + .+...... ..+......+++ +++ +|+++ ..++.|.+|+
T Consensus 58 spdg~~l~~~~~~~~~~~~v~~~~~~~~~---g-~~~~~~~~----~~~~~~p~~~~~--dg~-~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 58 SADGKFVYSVNEFSKDQAAVSAFAFDKEK---G-TLHLLNTQ----KTMGADPCYLTT--NGK-NIVTANYSGGSITVFP 126 (361)
T ss_dssp CTTSSEEEEEECCSSTTCEEEEEEEETTT---T-EEEEEEEE----ECSSSCEEEEEE--CSS-EEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEEEccCCCCCcEEEEEEeCCC---C-cEEEeeEe----ccCCCCcEEEEE--CCC-EEEEEECCCCEEEEEE
Confidence 8999999998875 799999987521 0 11100111 113445667777 777 55555 4789999999
Q ss_pred cCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEe-CCCcEEEEecCCce------
Q 009715 240 KSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVG-RDGYLRVFDYSKEQ------ 312 (528)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~-~dg~i~vwd~~~~~------ 312 (528)
+...+.......... +... ...+ ...+...+.+++|+|||++|++++ .++.|++|++....
T Consensus 127 ~~~~g~~~~~~~~~~--------~~g~-~~~~---~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~ 194 (361)
T 3scy_A 127 IGQDGALLPASDVIE--------FKGS-GPDK---ERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKE 194 (361)
T ss_dssp BCTTSCBCSCSEEEE--------CCCC-CSCT---TTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCC
T ss_pred eCCCCcCcccceeEE--------ccCC-CCCc---cccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCccccc
Confidence 976433211111000 0000 0000 001234578999999999776665 47899999887433
Q ss_pred -E------EeeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeE--EEEee---cCCCCeEEEEEecCCCCCC
Q 009715 313 -L------ICGGKSYYGALLCCAWSMDGKYILTGG-EDDLVQVWSMEDRKV--VAWGE---GHNSWVSGVAFDSYWSQPN 379 (528)
Q Consensus 313 -~------~~~~~~~~~~v~~l~~sp~g~~l~sg~-~dg~v~vwd~~~~~~--~~~~~---~h~~~V~~v~f~p~~~~~~ 379 (528)
+ .............++|+|||+++++++ .++.|.+||+++++. +..+. .+...+..++|+|
T Consensus 195 ~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp------ 268 (361)
T 3scy_A 195 KFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP------ 268 (361)
T ss_dssp CCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT------
T ss_pred ceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC------
Confidence 1 111222345678999999999888777 589999999987754 23232 3445678999999
Q ss_pred CCCCccceeEEEEEE-eC-CCeEEEEEcc--CCe--EEEEeecCCCCCCCeecCCCCCccCCceeeeec-CCCCceeeec
Q 009715 380 SDGTAETVMYRFGSV-GQ-DTRLLLWDLE--MDE--IVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGT-LQPAPSMRDV 452 (528)
Q Consensus 380 ~dg~~~~~~~~l~s~-s~-D~~i~lwd~~--~~~--~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~-~~~~~~~~d~ 452 (528)
|| ++|+++ .. ++.|.+|++. +++ .+..+........++|++++. .+.+.. .++.+.+|++
T Consensus 269 -dg------~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~------~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 269 -DG------KYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGK------YLLVACRDTNVIQIFER 335 (361)
T ss_dssp -TS------SEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSC------EEEEEETTTTEEEEEEE
T ss_pred -CC------CEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCC------EEEEEECCCCCEEEEEE
Confidence 99 455444 44 5899999996 444 344444434556788888873 333333 4566777544
Q ss_pred --CCCCceEEe-ecCCCCeEEEEEe
Q 009715 453 --PKLSPLVAH-RVHTEPLSGLIFT 474 (528)
Q Consensus 453 --~~~~~~~~~-~~h~~~V~~l~~s 474 (528)
.+.+..... ..+...+.||+|.
T Consensus 336 d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 336 DQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CTTTCCEEECSCCEECSSEEEEEEE
T ss_pred ECCCCcEeecceeeeCCCCeEEEEc
Confidence 444443322 2345678888886
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.73 E-value=6.5e-16 Score=153.99 Aligned_cols=267 Identities=12% Similarity=0.040 Sum_probs=166.8
Q ss_pred eEEEEecC--CcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCC
Q 009715 170 DLLIGLNS--GDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGD 247 (528)
Q Consensus 170 ~l~~g~~~--G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~ 247 (528)
.|++|+.. +.|++|++.... + .+....... ......+..++|+|+|+ +|++++.+ .|.+|++...+...
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~---g-~l~~~~~~~---~~~~~~~~~~a~spdg~-~l~~~~~~-~v~~~~~~~~g~~~ 74 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEK---L-TCKLIKRTE---IPQDEPISWMTFDHERK-NIYGAAMK-KWSSFAVKSPTEIV 74 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTT---T-EEEEEEEEE---CCTTCCCSEEEECTTSS-EEEEEEBT-EEEEEEEEETTEEE
T ss_pred EEEEEEccCCCcEEEEEEECCC---C-CEEEeeEEc---cCCCCCCcEEEECCCCC-EEEEEccc-eEEEEEECCCCCEE
Confidence 46677754 568888775311 1 111000000 01234678899999999 88888887 99999986212110
Q ss_pred CccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCE--EEEEe-------------CCCcEEEEecC-Cc
Q 009715 248 SSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTY--LATVG-------------RDGYLRVFDYS-KE 311 (528)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~--l~s~~-------------~dg~i~vwd~~-~~ 311 (528)
. +..... .+.+.+++|+|||++ ++++. .++.+.+|++. ++
T Consensus 75 ~-----------------------~~~~~~-~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g 130 (365)
T 1jof_A 75 H-----------------------EASHPI-GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETG 130 (365)
T ss_dssp E-----------------------EEEEEC-CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTC
T ss_pred E-----------------------eeEeec-CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCC
Confidence 0 000000 123556899999994 44543 68999999997 46
Q ss_pred eEEeeec----ccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECC-CCeEE--EEee--cCCCCeEEEEEecCCCCCCCC
Q 009715 312 QLICGGK----SYYGALLCCAWSMDGKYILTGGE-DDLVQVWSME-DRKVV--AWGE--GHNSWVSGVAFDSYWSQPNSD 381 (528)
Q Consensus 312 ~~~~~~~----~~~~~v~~l~~sp~g~~l~sg~~-dg~v~vwd~~-~~~~~--~~~~--~h~~~V~~v~f~p~~~~~~~d 381 (528)
+....+. .+...+.+++|+|||++|+++.. ++.|++||++ +++.. ..+. .|...+..++|+| |
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp-------d 203 (365)
T 1jof_A 131 KLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP-------T 203 (365)
T ss_dssp CEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT-------T
T ss_pred cCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC-------C
Confidence 5543332 24567899999999998887764 6799999998 67543 3333 2466799999999 9
Q ss_pred CCccceeEEEEEEe-CCCeEEEEEcc--CCeEEE---EeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCC
Q 009715 382 GTAETVMYRFGSVG-QDTRLLLWDLE--MDEIVV---PLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKL 455 (528)
Q Consensus 382 g~~~~~~~~l~s~s-~D~~i~lwd~~--~~~~~~---~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~ 455 (528)
| +++++++ .++.|.+|++. +++... .+...+.
T Consensus 204 g------~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~------------------------------------ 241 (365)
T 1jof_A 204 G------NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP------------------------------------ 241 (365)
T ss_dssp S------SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT------------------------------------
T ss_pred C------CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC------------------------------------
Confidence 9 5666655 57899999875 454321 1111000
Q ss_pred CceEEeecCCC------CeEEEE-EeCCe--EEEEECC-C-----eEEEEeCC-CCcccc----CC-Cc--cceEEEcc-
Q 009715 456 SPLVAHRVHTE------PLSGLI-FTQES--VLTVCRE-G-----HIKIWMRP-GVAESQ----SS-SS--ETVLSTSS- 511 (528)
Q Consensus 456 ~~~~~~~~h~~------~V~~l~-~s~d~--l~t~s~D-g-----~i~iW~~~-~~~~~~----~~-~~--~~vl~~sp- 511 (528)
.+.+|.. .+..++ |+||+ |+++..+ . .|++|++. .+.... .. +. ..-++|+|
T Consensus 242 ----~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~ 317 (365)
T 1jof_A 242 ----GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPC 317 (365)
T ss_dssp ----TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEEC
T ss_pred ----CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCC
Confidence 0011222 478999 99985 6555432 3 89999985 444321 11 22 22388999
Q ss_pred --CCceEEEeeee
Q 009715 512 --KDKPLLSSKVV 522 (528)
Q Consensus 512 --d~~~l~s~~~~ 522 (528)
||++|++++.+
T Consensus 318 ~~dg~~l~v~~~~ 330 (365)
T 1jof_A 318 PWSDEWMAITDDQ 330 (365)
T ss_dssp TTCTTEEEEECSS
T ss_pred CcCCCEEEEEEcC
Confidence 89999988764
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.72 E-value=3e-15 Score=163.44 Aligned_cols=299 Identities=11% Similarity=0.003 Sum_probs=180.9
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeecc-CCcccCCceeEEEEeeCCCcEEEEEeCC---------ce
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNK-DGSVNNSRCTSVTWVPGGDGAFVVGHAD---------GN 234 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~~p~g~~~l~tg~~d---------g~ 234 (528)
++++.+++.+ +|.|++||+.+.. .. ..+.. ....+......++|+|||+ +|+.++.+ +.
T Consensus 25 ~~dg~~~~~~--~~~i~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~Spdg~-~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 25 ISDHEYLYKQ--ENNILVFNAEYGN-----SS---VFLENSTFDEFGHSINDYSISPDGQ-FILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CSSSEEEEEE--TTEEEEEETTTCC-----EE---EEECTTTTTTCCSCCCEEEECTTSS-EEEEEEEEEECSSSCEEEE
T ss_pred CCCCcEEEEc--CCcEEEEECCCCc-----eE---EEEechhhhhhcccccceEECCCCC-EEEEEECCeeeEEEccceE
Confidence 4677666665 8899999987621 11 00111 1111222345689999999 78887776 66
Q ss_pred EEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEE
Q 009715 235 LYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLI 314 (528)
Q Consensus 235 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~ 314 (528)
+++||+.++.. ..+..|.+.+..++|||||+.||.+. |+.|++||+.+++..
T Consensus 94 ~~~~d~~~~~~---------------------------~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 94 YDIYDLNKRQL---------------------------ITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSY 145 (740)
T ss_dssp EEEEETTTTEE---------------------------CCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCE
T ss_pred EEEEECCCCcE---------------------------EEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceE
Confidence 77999986321 11223446789999999999999985 689999999887755
Q ss_pred ee-ecccCCCe-----------------EEEEEcCCCCEEEEEeCCC---------------------------------
Q 009715 315 CG-GKSYYGAL-----------------LCCAWSMDGKYILTGGEDD--------------------------------- 343 (528)
Q Consensus 315 ~~-~~~~~~~v-----------------~~l~~sp~g~~l~sg~~dg--------------------------------- 343 (528)
+. ..++...+ ..+.|||||++||....|.
T Consensus 146 ~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~ 225 (740)
T 4a5s_A 146 RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVN 225 (740)
T ss_dssp ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCC
T ss_pred EEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcC
Confidence 42 22222222 3589999999999875322
Q ss_pred ---cEEEEECCC---C---eEEEEee-----cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe----CCCeEEEEEc
Q 009715 344 ---LVQVWSMED---R---KVVAWGE-----GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG----QDTRLLLWDL 405 (528)
Q Consensus 344 ---~v~vwd~~~---~---~~~~~~~-----~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s----~D~~i~lwd~ 405 (528)
.|++||+.+ + +...... +|...+..++|+| || .+++... .+..|++||+
T Consensus 226 ~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp-------dg------~~~~~~~~r~~~~~~i~~~d~ 292 (740)
T 4a5s_A 226 PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT-------QE------RISLQWLRRIQNYSVMDICDY 292 (740)
T ss_dssp CEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE-------TT------EEEEEEEESSTTEEEEEEEEE
T ss_pred CeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC-------CC------eEEEEEeCCCCCEEEEEEEEC
Confidence 488899988 7 3333222 3788899999999 99 5444443 3347999999
Q ss_pred cCCe----EEEE--e--e-cCCC-----CCCCeecCCCCCccCCceeeeecC--CCCceeeecCCCCceEEeecCCCCeE
Q 009715 406 EMDE----IVVP--L--R-RGPL-----GGSPTFSTGSQSAHWDNVCPVGTL--QPAPSMRDVPKLSPLVAHRVHTEPLS 469 (528)
Q Consensus 406 ~~~~----~~~~--~--~-~~~~-----~~~~~~s~~~~~~~~d~~~~~g~~--~~~~~~~d~~~~~~~~~~~~h~~~V~ 469 (528)
.+++ +... + . .... ...+.|++++.... +..... ...+.+++....++.. +....-.|.
T Consensus 293 ~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~----~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~ 367 (740)
T 4a5s_A 293 DESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFY----KIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVI 367 (740)
T ss_dssp ETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEE----EEEECTTSCEEEEEEETTCSSCEE-SCCSSSCEE
T ss_pred CCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEE----EEEEcCCCceEEEEEECCCCceEe-cccCCEEEE
Confidence 9987 3221 1 1 1111 23678888884211 011111 2346667776654443 333345565
Q ss_pred EEE-EeCCeEE-EEEC----CC--eEEEEeCCCCccc--cCC----Cccce--EEEccCCceEEEee
Q 009715 470 GLI-FTQESVL-TVCR----EG--HIKIWMRPGVAES--QSS----SSETV--LSTSSKDKPLLSSK 520 (528)
Q Consensus 470 ~l~-~s~d~l~-t~s~----Dg--~i~iW~~~~~~~~--~~~----~~~~v--l~~spd~~~l~s~~ 520 (528)
.+. |+.+.|+ ++.. .+ .|...++.+.... ... ..... .+||||+++++...
T Consensus 368 ~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~ 434 (740)
T 4a5s_A 368 GIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRC 434 (740)
T ss_dssp EEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEE
T ss_pred EEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEe
Confidence 554 5533444 4433 13 4555555554321 221 12233 88999999887543
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.69 E-value=6.8e-15 Score=146.33 Aligned_cols=284 Identities=11% Similarity=-0.005 Sum_probs=181.6
Q ss_pred CCCCeEEEEe------cCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEe---------
Q 009715 166 KDGHDLLIGL------NSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGH--------- 230 (528)
Q Consensus 166 ~~~~~l~~g~------~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~--------- 230 (528)
++++.+++.. .++.|++||..+. +. .... . .+..+ .++|+|+|+ +|+++.
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~-----~~-~~~i--~----~g~~p--~i~~spdg~-~lyv~~~~~~~~~~g 77 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNG-----KF-LGMV--P----TAFNG--HVQVSNDGK-KIYTMTTYHERITRG 77 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTC-----CE-EEEE--E----CCEEE--EEEECTTSS-EEEEEEEEETTSSSS
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCC-----eE-EEEe--c----CCCCC--ceEECCCCC-EEEEEEecccccccC
Confidence 3455555543 3679999997652 11 1111 1 13333 899999999 777765
Q ss_pred -CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEee------cCCCeEEEEECCCCCEEEEEeC--CC
Q 009715 231 -ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHI------CQGSINSIAFSTDGTYLATVGR--DG 301 (528)
Q Consensus 231 -~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~spdg~~l~s~~~--dg 301 (528)
.++.|.+||..+. +.+..+.. +......++|+|||++|+++.. ++
T Consensus 78 ~~~~~v~v~d~~t~--------------------------~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~ 131 (361)
T 2oiz_A 78 KRSDVVEVWDADKL--------------------------TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPAT 131 (361)
T ss_dssp CEEEEEEEEETTTC--------------------------CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSE
T ss_pred CCCCEEEEEECcCC--------------------------cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCC
Confidence 3678999998642 11222221 1245668999999999999874 57
Q ss_pred cEEEEecCCceEEee-ecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCC-CeEEEE------eecCCCCeEEEEEe
Q 009715 302 YLRVFDYSKEQLICG-GKSYYGALLCCAWSMDG-KYILTGGEDDLVQVWSMED-RKVVAW------GEGHNSWVSGVAFD 372 (528)
Q Consensus 302 ~i~vwd~~~~~~~~~-~~~~~~~v~~l~~sp~g-~~l~sg~~dg~v~vwd~~~-~~~~~~------~~~h~~~V~~v~f~ 372 (528)
.|.+||+++++.+.. +. ..+ ...+.+.|++ ..+++.+.||.+.+|+++. ++.... +..+..++ .+.+.
T Consensus 132 ~v~v~d~~~~~~~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~ 208 (361)
T 2oiz_A 132 SIGIVDVAKGDYVEDVTA-AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPA 208 (361)
T ss_dssp EEEEEETTTTEEEEEEGG-GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCE
T ss_pred eEEEEECCCCcEEEEEec-CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEec
Confidence 899999999998877 54 222 2335677866 6778888999999999865 554422 22222222 22334
Q ss_pred cCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeE--EEEeecC-----------CCCCCCeecCCCCCccCCceee
Q 009715 373 SYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEI--VVPLRRG-----------PLGGSPTFSTGSQSAHWDNVCP 439 (528)
Q Consensus 373 p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~--~~~~~~~-----------~~~~~~~~s~~~~~~~~d~~~~ 439 (528)
| ++ ..++..+.++.|.++|+..+.. ...+... .....++|++++. .+.
T Consensus 209 ~-------~g------~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~------~ly 269 (361)
T 2oiz_A 209 L-------DK------DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASG------RMY 269 (361)
T ss_dssp E-------CS------SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTT------EEE
T ss_pred c-------cC------CEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCC------eEE
Confidence 5 55 3455566889999999976542 2222110 1111256666542 111
Q ss_pred ee-c----------CCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCC--ccccC----
Q 009715 440 VG-T----------LQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGV--AESQS---- 500 (528)
Q Consensus 440 ~g-~----------~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~--~~~~~---- 500 (528)
+. . ....+.+||..+.+.+..+..+. +.+++|+||+ |++++. +.|.+||..++ +....
T Consensus 270 v~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~ 346 (361)
T 2oiz_A 270 VFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGA 346 (361)
T ss_dssp EEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTS
T ss_pred EEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccC
Confidence 11 1 13468889999999999998887 8999999985 776666 99999999987 53322
Q ss_pred CCccceEEEccCCce
Q 009715 501 SSSETVLSTSSKDKP 515 (528)
Q Consensus 501 ~~~~~vl~~spd~~~ 515 (528)
+.....++++|||+.
T Consensus 347 G~~P~~~~~~p~G~~ 361 (361)
T 2oiz_A 347 AEASLQVQFHPVGGT 361 (361)
T ss_dssp CSSEEEEEECCCSCC
T ss_pred CCCcEEEEecCCCCC
Confidence 223334899999973
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.69 E-value=7.9e-15 Score=146.91 Aligned_cols=274 Identities=14% Similarity=0.027 Sum_probs=167.1
Q ss_pred CCCCCeEEEEec-CC--cEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcC
Q 009715 165 AKDGHDLLIGLN-SG--DVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKS 241 (528)
Q Consensus 165 ~~~~~~l~~g~~-~G--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~ 241 (528)
+||++.|+.... +| .|++||+.... .. .. ...+...+..++|+|+|+ .|+.+..++.|++||+.
T Consensus 44 SpDg~~l~~~~~~~g~~~l~~~d~~~g~-----~~----~l---t~~~~~~~~~~~~spdg~-~l~~~~~~~~l~~~d~~ 110 (388)
T 3pe7_A 44 TRDGSKLLFGGAFDGPWNYYLLDLNTQV-----AT----QL---TEGRGDNTFGGFLSPDDD-ALFYVKDGRNLMRVDLA 110 (388)
T ss_dssp CTTSCEEEEEECTTSSCEEEEEETTTCE-----EE----EC---CCSSCBCSSSCEECTTSS-EEEEEETTTEEEEEETT
T ss_pred CCCCCEEEEEEcCCCCceEEEEeCCCCc-----eE----Ee---eeCCCCCccceEEcCCCC-EEEEEeCCCeEEEEECC
Confidence 678888877776 56 47788876511 10 00 011444455678999999 89999989999999998
Q ss_pred CCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEE--EECCCCCEEEEEe---------------------
Q 009715 242 KDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSI--AFSTDGTYLATVG--------------------- 298 (528)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l--~~spdg~~l~s~~--------------------- 298 (528)
... ....+..+...+... .++|++.+++...
T Consensus 111 ~g~--------------------------~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 111 TLE--------------------------ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp TCC--------------------------EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred CCc--------------------------ceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 621 122223333434333 3488999887532
Q ss_pred -CCCcEEEEecCCceEEeeecccCCCeEEEEEcC-CCCEEEEEeCC------CcEEEEECCCCeEEEEeecCC--CCeEE
Q 009715 299 -RDGYLRVFDYSKEQLICGGKSYYGALLCCAWSM-DGKYILTGGED------DLVQVWSMEDRKVVAWGEGHN--SWVSG 368 (528)
Q Consensus 299 -~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp-~g~~l~sg~~d------g~v~vwd~~~~~~~~~~~~h~--~~V~~ 368 (528)
.+..|.+||+.+++.... ..+...+..++|+| ||+.|+....+ ..|.++|+..++.. .+..+. ..+..
T Consensus 165 ~~~~~l~~~d~~~g~~~~l-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVI-LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTH 242 (388)
T ss_dssp CCCEEEEEEETTTCCEEEE-EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEE
T ss_pred CCcceEEEEECCCCceEEe-ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCccccc
Confidence 346799999998876544 34667789999999 99998877653 37888888765543 343344 35888
Q ss_pred EEEecCCCCCCCCCCccceeEEEEEEeC--CC---eEEEEEccCCeEEEEeecCC------CCCCCeecCCCCCccCCce
Q 009715 369 VAFDSYWSQPNSDGTAETVMYRFGSVGQ--DT---RLLLWDLEMDEIVVPLRRGP------LGGSPTFSTGSQSAHWDNV 437 (528)
Q Consensus 369 v~f~p~~~~~~~dg~~~~~~~~l~s~s~--D~---~i~lwd~~~~~~~~~~~~~~------~~~~~~~s~~~~~~~~d~~ 437 (528)
++|+| || ..|+..+. +. .|.+||+.+++......... ......|++++....+...
T Consensus 243 ~~~sp-------dg------~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 309 (388)
T 3pe7_A 243 EFWVP-------DG------SALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQ 309 (388)
T ss_dssp EEECT-------TS------SCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-----
T ss_pred ceECC-------CC------CEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEee
Confidence 99999 99 44443332 22 39999999987543322211 1233467777642111000
Q ss_pred ---eeeecCCCCceeeecCCCCceEEeecCCC-----------CeEEEEEeCCe--EEEEE-CCCeEEEEeCC
Q 009715 438 ---CPVGTLQPAPSMRDVPKLSPLVAHRVHTE-----------PLSGLIFTQES--VLTVC-REGHIKIWMRP 493 (528)
Q Consensus 438 ---~~~g~~~~~~~~~d~~~~~~~~~~~~h~~-----------~V~~l~~s~d~--l~t~s-~Dg~i~iW~~~ 493 (528)
-........+.+||+...+. ..+..|.. .+.+++|+||+ |+..+ .+|...||.+.
T Consensus 310 ~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 310 DDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp -------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 00012344567777766543 34444544 46777888875 44443 56666666543
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.68 E-value=5.9e-15 Score=147.02 Aligned_cols=241 Identities=11% Similarity=0.075 Sum_probs=154.3
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCc-EEEEEe-------------
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDG-AFVVGH------------- 230 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~-~l~tg~------------- 230 (528)
+++++.|+++..+ .|.+|++... ++ +........ + +.+.+++|+|+|+. +++++.
T Consensus 48 spdg~~l~~~~~~-~v~~~~~~~~----g~-~~~~~~~~~----~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 48 DHERKNIYGAAMK-KWSSFAVKSP----TE-IVHEASHPI----G-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp CTTSSEEEEEEBT-EEEEEEEEET----TE-EEEEEEEEC----C-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCEEEEEccc-eEEEEEECCC----CC-EEEeeEeec----C-CCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 7899989888887 9999998620 11 111011000 1 12456899999983 234443
Q ss_pred CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEe-ecCCCeEEEEECCCCCEEEEEeC-CCcEEEEec
Q 009715 231 ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWH-ICQGSINSIAFSTDGTYLATVGR-DGYLRVFDY 308 (528)
Q Consensus 231 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~spdg~~l~s~~~-dg~i~vwd~ 308 (528)
.+|.+.+|++...+..... +..+. .+...+.+++|+|||++|+++.. ++.|++||+
T Consensus 117 ~~g~v~v~~~~~~g~~~~~----------------------~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~ 174 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKN----------------------VQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRK 174 (365)
T ss_dssp SCCEEEEEEECTTCCEEEE----------------------EEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCceEEEEccCCCCcCcce----------------------EeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEE
Confidence 6899999999753321100 11111 13467899999999998887764 679999999
Q ss_pred C-CceEE--eeec--ccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECC--CCeEE---E---Eee----cCCC------
Q 009715 309 S-KEQLI--CGGK--SYYGALLCCAWSMDGKYILTGGE-DDLVQVWSME--DRKVV---A---WGE----GHNS------ 364 (528)
Q Consensus 309 ~-~~~~~--~~~~--~~~~~v~~l~~sp~g~~l~sg~~-dg~v~vwd~~--~~~~~---~---~~~----~h~~------ 364 (528)
+ +++.. ..+. .+...+..++|+|||++|++++. ++.|.+|+++ +++.. . .+. +|..
T Consensus 175 ~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 254 (365)
T 1jof_A 175 LASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGL 254 (365)
T ss_dssp CTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBS
T ss_pred CCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccccc
Confidence 8 67653 2232 23567899999999999888775 6899999875 45542 1 221 2222
Q ss_pred CeEEEE-EecCCCCCCCCCCccceeEEEEEEeC-CC-----eEEEEEcc-CCeEEEEeecCCCCCCCeecCCCCCccCCc
Q 009715 365 WVSGVA-FDSYWSQPNSDGTAETVMYRFGSVGQ-DT-----RLLLWDLE-MDEIVVPLRRGPLGGSPTFSTGSQSAHWDN 436 (528)
Q Consensus 365 ~V~~v~-f~p~~~~~~~dg~~~~~~~~l~s~s~-D~-----~i~lwd~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~ 436 (528)
.+..++ |+| || ++|+++.. +. .|.+|++. +++......
T Consensus 255 ~~~~i~~~sp-------dG------~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~--------------------- 300 (365)
T 1jof_A 255 YRADVCALTF-------SG------KYMFASSRANKFELQGYIAGFKLRDCGSIEKQLF--------------------- 300 (365)
T ss_dssp EEEEEEEECT-------TS------SEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEE---------------------
T ss_pred ccccEEEECC-------CC------CEEEEECCCCCCCCCCeEEEEEECCCCCEEEeee---------------------
Confidence 588999 999 99 45555443 33 89999986 454332110
Q ss_pred eeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeC---Ce--EEEEEC-CCeEEEEeCCCC
Q 009715 437 VCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQ---ES--VLTVCR-EGHIKIWMRPGV 495 (528)
Q Consensus 437 ~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~---d~--l~t~s~-Dg~i~iW~~~~~ 495 (528)
....+...+..++|+| |+ |++++. ++.|++|++...
T Consensus 301 -----------------------~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 301 -----------------------LSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp -----------------------EEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred -----------------------eeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 0111223345678888 53 777775 489999998765
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.67 E-value=2.1e-14 Score=140.82 Aligned_cols=246 Identities=9% Similarity=0.005 Sum_probs=174.0
Q ss_pred cCCceeEEEEeeCCCcEEEEEeCCc------------------------eEEEEEcCCCCCCCCccccccccceeEEecc
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHADG------------------------NLYVYEKSKDGAGDSSFPVIKDQTQFSVAHP 264 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~dg------------------------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (528)
.-..+.+|+++|+|+ ++++...++ .|.+||..++
T Consensus 22 ~l~~v~~va~d~~G~-l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g--------------------- 79 (329)
T 3fvz_A 22 LPGQVSGVALDSKNN-LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA--------------------- 79 (329)
T ss_dssp CCSCEEEEEECTTCC-EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC---------------------
T ss_pred ecCCceEEEECCCCC-EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC---------------------
Confidence 446799999999998 888877774 5666665431
Q ss_pred CCCCCCCeEEEe-ecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCce-EEeee---------cccCCCeEEEEEcC-C
Q 009715 265 RYSKSNPIARWH-ICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQ-LICGG---------KSYYGALLCCAWSM-D 332 (528)
Q Consensus 265 ~~~~~~~~~~~~-~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~-~~~~~---------~~~~~~v~~l~~sp-~ 332 (528)
..+..+. .+-..+..++++|+|+++++...++.|++||..... .+..+ ..+......|+++| +
T Consensus 80 -----~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~ 154 (329)
T 3fvz_A 80 -----EILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPST 154 (329)
T ss_dssp -----CEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTT
T ss_pred -----eEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCC
Confidence 1111121 223578899999999988888888999999986442 33333 23445688999999 8
Q ss_pred CCEEEEEe-CCCcEEEEECCCCeEEEEeec----------CCCCeEEEEEecCCCCCCCC-CCccceeEEEEEEeCCCeE
Q 009715 333 GKYILTGG-EDDLVQVWSMEDRKVVAWGEG----------HNSWVSGVAFDSYWSQPNSD-GTAETVMYRFGSVGQDTRL 400 (528)
Q Consensus 333 g~~l~sg~-~dg~v~vwd~~~~~~~~~~~~----------h~~~V~~v~f~p~~~~~~~d-g~~~~~~~~l~s~s~D~~i 400 (528)
+.++++.+ .++.|++|| .+++.+..+.. +-.....|+++| + | .++++...+++|
T Consensus 155 g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~-------~~g------~l~v~d~~~~~I 220 (329)
T 3fvz_A 155 GAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVP-------HLD------QLCVADRENGRI 220 (329)
T ss_dssp CCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEET-------TTT------EEEEEETTTTEE
T ss_pred CeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEEC-------CCC------EEEEEECCCCEE
Confidence 88888876 689999999 56777666642 224589999999 8 7 788888899999
Q ss_pred EEEEccCCeEEEEeecCC---CCCCCeecCCCCCccCCc-eeeeecCCCCceeeecCCCCceEEee---cCCCCeEEEEE
Q 009715 401 LLWDLEMDEIVVPLRRGP---LGGSPTFSTGSQSAHWDN-VCPVGTLQPAPSMRDVPKLSPLVAHR---VHTEPLSGLIF 473 (528)
Q Consensus 401 ~lwd~~~~~~~~~~~~~~---~~~~~~~s~~~~~~~~d~-~~~~g~~~~~~~~~d~~~~~~~~~~~---~h~~~V~~l~~ 473 (528)
++||..+++.+..+.... ....+++.+ +.....+. ..........+.+|+....+.+..+. .+...+.+|++
T Consensus 221 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~ 299 (329)
T 3fvz_A 221 QCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVA 299 (329)
T ss_dssp EEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEE
T ss_pred EEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEE
Confidence 999999888888775422 223344555 21111111 11122334578889988888887773 56778999999
Q ss_pred eCCe--EEEEECCCeEEEEeCCCCc
Q 009715 474 TQES--VLTVCREGHIKIWMRPGVA 496 (528)
Q Consensus 474 s~d~--l~t~s~Dg~i~iW~~~~~~ 496 (528)
+|++ +++...++.|++|++.+..
T Consensus 300 ~~dG~lyvad~~~~~I~~~~~~~~~ 324 (329)
T 3fvz_A 300 SEDGTVYIGDAHTNTVWKFTLTEKM 324 (329)
T ss_dssp CTTSEEEEEESSSCCEEEEEEEECS
T ss_pred CCCCCEEEEECCCCEEEEEeCCccc
Confidence 9985 6677788999999987643
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.65 E-value=1.3e-15 Score=166.41 Aligned_cols=263 Identities=13% Similarity=0.101 Sum_probs=167.0
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecC-----CCeEEE
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQ-----GSINSI 285 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~l 285 (528)
.....++|+|+|+ +|+++ ||+|++||+.++. . ...+..|. .....+
T Consensus 17 ~~~~~~~w~~dg~-~~~~~--~~~i~~~~~~~~~-~-------------------------~~~~~~~~~~~~~~~~~~~ 67 (740)
T 4a5s_A 17 LKLYSLRWISDHE-YLYKQ--ENNILVFNAEYGN-S-------------------------SVFLENSTFDEFGHSINDY 67 (740)
T ss_dssp CCCCCEEECSSSE-EEEEE--TTEEEEEETTTCC-E-------------------------EEEECTTTTTTCCSCCCEE
T ss_pred ccccccEECCCCc-EEEEc--CCcEEEEECCCCc-e-------------------------EEEEechhhhhhcccccce
Confidence 3466899999998 78776 9999999998632 1 11122222 223458
Q ss_pred EECCCCCEEEEEeCC---------CcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEE
Q 009715 286 AFSTDGTYLATVGRD---------GYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVV 356 (528)
Q Consensus 286 ~~spdg~~l~s~~~d---------g~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~ 356 (528)
+|||||++|+.++.+ +.+.+||+.+++.. .+..+.+.+..++|||||+.||.+. |+.|++||+.+++..
T Consensus 68 ~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 68 SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSY 145 (740)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCE
T ss_pred EECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceE
Confidence 999999999999876 56779999998865 4566778899999999999999885 689999999887755
Q ss_pred EE-eecCCCCe-----------------EEEEEecCCCCCCCCCCccceeEEEEEEeCCC--------------------
Q 009715 357 AW-GEGHNSWV-----------------SGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT-------------------- 398 (528)
Q Consensus 357 ~~-~~~h~~~V-----------------~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~-------------------- 398 (528)
+. ..++...+ ..+.|+| || +.|+..+.|.
T Consensus 146 ~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-------Dg------~~la~~~~d~~~v~~~~~~~~~~~~~~~~~ 212 (740)
T 4a5s_A 146 RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-------NG------TFLAYAQFNDTEVPLIEYSFYSDESLQYPK 212 (740)
T ss_dssp ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-------TS------SEEEEEEEECTTCCEEEEEECCSTTCSSCE
T ss_pred EEcCCCCccceecCcccccccchhcCCCcceEECC-------CC------CEEEEEEEcccCCceEEEEeecCCCCCCCc
Confidence 42 22333333 3489999 99 5666664321
Q ss_pred ----------------eEEEEEccC---Ce--EEEEeec-------CCCCCCCeecCCCCCccCCceeeeecCCCCceee
Q 009715 399 ----------------RLLLWDLEM---DE--IVVPLRR-------GPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMR 450 (528)
Q Consensus 399 ----------------~i~lwd~~~---~~--~~~~~~~-------~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~ 450 (528)
+|++||+.+ ++ ....+.. ...+..+.|++++..... ...-......+.+|
T Consensus 213 ~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~--~~~r~~~~~~i~~~ 290 (740)
T 4a5s_A 213 TVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQ--WLRRIQNYSVMDIC 290 (740)
T ss_dssp EEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEE--EEESSTTEEEEEEE
T ss_pred ceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEE--EeCCCCCEEEEEEE
Confidence 578888887 63 1222221 122345677887741100 00011122357788
Q ss_pred ecCCCC------ceEEe--ecCCCCeE-----EEEEeCCe--EE-EEE-CC--CeEEEEeCCCCccccCC-CccceE-EE
Q 009715 451 DVPKLS------PLVAH--RVHTEPLS-----GLIFTQES--VL-TVC-RE--GHIKIWMRPGVAESQSS-SSETVL-ST 509 (528)
Q Consensus 451 d~~~~~------~~~~~--~~h~~~V~-----~l~~s~d~--l~-t~s-~D--g~i~iW~~~~~~~~~~~-~~~~vl-~~ 509 (528)
|+.+.+ .+..+ ..|...|. .++|+||+ |+ ..+ .+ ..|++|++.++...... ..-.+. .+
T Consensus 291 d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~ 370 (740)
T 4a5s_A 291 DYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIE 370 (740)
T ss_dssp EEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEE
T ss_pred ECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEE
Confidence 877765 12222 45665554 78899985 55 555 44 46888998877644332 222332 23
Q ss_pred ccCCceEEEe
Q 009715 510 SSKDKPLLSS 519 (528)
Q Consensus 510 spd~~~l~s~ 519 (528)
.+|++.|+..
T Consensus 371 ~~d~~~i~f~ 380 (740)
T 4a5s_A 371 ALTSDYLYYI 380 (740)
T ss_dssp EECSSEEEEE
T ss_pred EEeCCEEEEE
Confidence 4667766543
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.64 E-value=9e-15 Score=146.66 Aligned_cols=211 Identities=13% Similarity=-0.004 Sum_probs=123.3
Q ss_pred CCCCCeEEEEecC---CcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcC
Q 009715 165 AKDGHDLLIGLNS---GDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKS 241 (528)
Q Consensus 165 ~~~~~~l~~g~~~---G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~ 241 (528)
+|+|+.|+..... ..|++||+.... . ..+.. .+......+.|+|+|+ .|+..+.++.|++|++.
T Consensus 44 SpdG~~l~~~~~~~g~~~l~~~d~~~~~-----~----~~l~~---~~~~~~~~~~~spdg~-~l~~~~~~~~l~~~d~~ 110 (396)
T 3c5m_A 44 TQDGKKLLFAGDFDGNRNYYLLNLETQQ-----A----VQLTE---GKGDNTFGGFISTDER-AFFYVKNELNLMKVDLE 110 (396)
T ss_dssp CTTSCEEEEEECTTSSCEEEEEETTTTE-----E----EECCC---SSCBCTTTCEECTTSS-EEEEEETTTEEEEEETT
T ss_pred CCCCCEEEEEEecCCCceEEEEECCCCc-----E----EEeec---CCCCccccceECCCCC-EEEEEEcCCcEEEEECC
Confidence 5777776665443 367788876521 0 00110 0112233478999999 88888888899999987
Q ss_pred CCCCCCCccccccc--cceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEE-----eCCCcEEEEecCCceEE
Q 009715 242 KDGAGDSSFPVIKD--QTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATV-----GRDGYLRVFDYSKEQLI 314 (528)
Q Consensus 242 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~-----~~dg~i~vwd~~~~~~~ 314 (528)
... .......... .....+... ........+ ...+.|+|+++.++.. ..+..|.+||+.+++..
T Consensus 111 ~~~-~~~~~~~~~~~~~~g~~l~~~--~~~~~~~~~------~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 181 (396)
T 3c5m_A 111 TLE-EQVIYTVDEEWKGYGTWVANS--DCTKLVGIE------ILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELE 181 (396)
T ss_dssp TCC-EEEEEECCTTEEEEEEEEECT--TSSEEEEEE------EEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEE
T ss_pred CCC-cEEEEecccccCCCCCEEEec--cCCcccccc------ccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEE
Confidence 521 1111100000 000000000 000000000 0114578888877665 35668999999988765
Q ss_pred eeecccCCCeEEEEEcC-CCCEEEEEeCC------CcEEEEECCCCeEEEEeecC-CCCeEEEEEecCCCCCCCCCCccc
Q 009715 315 CGGKSYYGALLCCAWSM-DGKYILTGGED------DLVQVWSMEDRKVVAWGEGH-NSWVSGVAFDSYWSQPNSDGTAET 386 (528)
Q Consensus 315 ~~~~~~~~~v~~l~~sp-~g~~l~sg~~d------g~v~vwd~~~~~~~~~~~~h-~~~V~~v~f~p~~~~~~~dg~~~~ 386 (528)
... .+...+..+.|+| +++.|+..+.+ ..|.+||+..++........ ...+..++|+| ||
T Consensus 182 ~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp-------dg---- 249 (396)
T 3c5m_A 182 VIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIP-------DG---- 249 (396)
T ss_dssp EEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECT-------TS----
T ss_pred eec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECC-------CC----
Confidence 544 4667789999999 88877766543 36889998766543333311 23588899999 99
Q ss_pred eeEEEEEEeCC-----CeEEEEEccCCeEE
Q 009715 387 VMYRFGSVGQD-----TRLLLWDLEMDEIV 411 (528)
Q Consensus 387 ~~~~l~s~s~D-----~~i~lwd~~~~~~~ 411 (528)
.+|+..+.+ +.|.+||+.+++..
T Consensus 250 --~~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (396)
T 3c5m_A 250 --SAMAYVSYFKGQTDRVIYKANPETLENE 277 (396)
T ss_dssp --SCEEEEEEETTTCCEEEEEECTTTCCEE
T ss_pred --CEEEEEecCCCCccceEEEEECCCCCeE
Confidence 455555433 44999999877643
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.64 E-value=4.3e-13 Score=128.41 Aligned_cols=241 Identities=10% Similarity=0.063 Sum_probs=164.8
Q ss_pred cCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE-
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF- 287 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~- 287 (528)
+-..+.++++++++. ++++...++.|++||... .....+..... -..|...+..+++
T Consensus 28 ~~~~p~~v~~~~~g~-l~v~~~~~~~i~~~d~~g--~~~~~~~~~~~-------------------~~~~~~~p~~i~~~ 85 (286)
T 1q7f_A 28 QFTEPSGVAVNAQND-IIVADTNNHRIQIFDKEG--RFKFQFGECGK-------------------RDSQLLYPNRVAVV 85 (286)
T ss_dssp CBSCEEEEEECTTCC-EEEEEGGGTEEEEECTTS--CEEEEECCBSS-------------------STTCBSSEEEEEEE
T ss_pred ccCCCceEEECCCCC-EEEEECCCCEEEEECCCC--cEEEEecccCC-------------------CcccccCceEEEEE
Confidence 556789999999998 888888899999999752 11111110000 0012356889999
Q ss_pred CCCCCEEEEEeC-CCcEEEEecCCceEEeeecc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee--cCC
Q 009715 288 STDGTYLATVGR-DGYLRVFDYSKEQLICGGKS-YYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGE--GHN 363 (528)
Q Consensus 288 spdg~~l~s~~~-dg~i~vwd~~~~~~~~~~~~-~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~--~h~ 363 (528)
.+++.++++... ++.|++|| .+++.+..+.. +...+..++++|+|+++++...++.|.+||.. ++.+..+. .+.
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~ 163 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHL 163 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTC
T ss_pred cCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCcc
Confidence 467776666543 78999999 55766665532 34568899999999988887788999999964 55555554 355
Q ss_pred CCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC---CCCCCCeecCCCCCccCCceeee
Q 009715 364 SWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG---PLGGSPTFSTGSQSAHWDNVCPV 440 (528)
Q Consensus 364 ~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~d~~~~~ 440 (528)
..+..++++| +| .++++...++.|++||.. ++.+..+... .....+++.+++. .+..
T Consensus 164 ~~p~~i~~~~-------~g------~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~------l~v~ 223 (286)
T 1q7f_A 164 EFPNGVVVND-------KQ------EIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGE------ILIA 223 (286)
T ss_dssp SSEEEEEECS-------SS------EEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCC------EEEE
T ss_pred CCcEEEEECC-------CC------CEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCC------EEEE
Confidence 6789999999 98 777888889999999974 4555555432 1233455555542 2223
Q ss_pred ecCCC-CceeeecCCCCceEEeecCCC--CeEEEEEeCCe-EEEEECCCeEEEEeCCC
Q 009715 441 GTLQP-APSMRDVPKLSPLVAHRVHTE--PLSGLIFTQES-VLTVCREGHIKIWMRPG 494 (528)
Q Consensus 441 g~~~~-~~~~~d~~~~~~~~~~~~h~~--~V~~l~~s~d~-l~t~s~Dg~i~iW~~~~ 494 (528)
...+. .+.+|+. ..+.+..+..+.. .+.+++++|++ |+.++.|+.|++|++..
T Consensus 224 ~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 224 DNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp ECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred eCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 33333 7888884 4556666655543 47899999985 55557899999999754
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.63 E-value=8.7e-14 Score=139.27 Aligned_cols=275 Identities=12% Similarity=0.069 Sum_probs=161.9
Q ss_pred cCCCCCceeeccCCCCCCCcc-----ccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcE--EEEeCCCCCC-C-
Q 009715 94 LGTGNGSRTLGFGGGNGGSKS-----ISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAI--FISDLNSQDK-D- 164 (528)
Q Consensus 94 ~~~~~g~~~~sf~gh~~~v~~-----v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i--~v~~~~~~~~-~- 164 (528)
+...+|..+..+..|.+.+.. ..|+| ++..++..+. .++...++.++..... .+.+...... .
T Consensus 15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~-------~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~ 86 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTR-DGSKLLFGGA-------FDGPWNYYLLDLNTQVATQLTEGRGDNTFGG 86 (388)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCT-TSCEEEEEEC-------TTSSCEEEEEETTTCEEEECCCSSCBCSSSC
T ss_pred ecCCCCcceEEecCCcccccchhhcCccCCC-CCCEEEEEEc-------CCCCceEEEEeCCCCceEEeeeCCCCCccce
Confidence 444556666777777665544 66777 4433322221 0111235555543322 2222111111 1
Q ss_pred --CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEE--EeeCCCcEEEEE-----------
Q 009715 165 --AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVT--WVPGGDGAFVVG----------- 229 (528)
Q Consensus 165 --~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~--~~p~g~~~l~tg----------- 229 (528)
+||++.|+.+..++.|++||+.+.. ... .+. .+...+.... ++|++. +++..
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~g~-----~~~---~~~----~~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~~ 153 (388)
T 3pe7_A 87 FLSPDDDALFYVKDGRNLMRVDLATLE-----ENV---VYQ----VPAEWVGYGTWVANSDCT-KLVGIEIRREDWVPLT 153 (388)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCC-----EEE---EEE----CCTTEEEEEEEEECTTSS-EEEEEEEEGGGCCCCC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCc-----cee---eee----chhhcccccceeECCCCC-eeccccccCccccccc
Confidence 8999999999999999999998621 110 010 1333343333 488888 56532
Q ss_pred -----------eCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC-CCCEEEEE
Q 009715 230 -----------HADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST-DGTYLATV 297 (528)
Q Consensus 230 -----------~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-dg~~l~s~ 297 (528)
..+..|++||+.++ ....+..+...+..++|+| ||+.|+..
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~d~~~g---------------------------~~~~l~~~~~~~~~~~~sp~dg~~l~~~ 206 (388)
T 3pe7_A 154 DWKKFHEFYFTKPCCRLMRVDLKTG---------------------------ESTVILQENQWLGHPIYRPYDDSTVAFC 206 (388)
T ss_dssp SHHHHHHHGGGCCCEEEEEEETTTC---------------------------CEEEEEEESSCEEEEEEETTEEEEEEEE
T ss_pred ccchhhhhhccCCcceEEEEECCCC---------------------------ceEEeecCCccccccEECCCCCCEEEEE
Confidence 23467888887642 2233334556788999999 99999887
Q ss_pred eCC------CcEEEEecCCceEEeeecccC--CCeEEEEEcCCCCEEEEEeC-CC----cEEEEECCCCeEE--EEeecC
Q 009715 298 GRD------GYLRVFDYSKEQLICGGKSYY--GALLCCAWSMDGKYILTGGE-DD----LVQVWSMEDRKVV--AWGEGH 362 (528)
Q Consensus 298 ~~d------g~i~vwd~~~~~~~~~~~~~~--~~v~~l~~sp~g~~l~sg~~-dg----~v~vwd~~~~~~~--~~~~~h 362 (528)
..+ ..|.++|+..++.... ..+. ..+..++|+|||+.|+..+. ++ .|++||+.+++.. ..+.++
T Consensus 207 ~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 285 (388)
T 3pe7_A 207 HEGPHDLVDARMWLINEDGTNMRKV-KTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPAC 285 (388)
T ss_dssp ECSCTTTSSCSEEEEETTSCCCEES-CCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCE
T ss_pred EecCCCCCcceEEEEeCCCCceEEe-eeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCc
Confidence 753 3788888876554333 3333 25778899999997765433 22 3999999988643 333321
Q ss_pred CCC---eEEEEEecCCCCCCCCCCccceeEEEEEE---------eCCCeEEEEEccCCeEEEEeecCC-----------C
Q 009715 363 NSW---VSGVAFDSYWSQPNSDGTAETVMYRFGSV---------GQDTRLLLWDLEMDEIVVPLRRGP-----------L 419 (528)
Q Consensus 363 ~~~---V~~v~f~p~~~~~~~dg~~~~~~~~l~s~---------s~D~~i~lwd~~~~~~~~~~~~~~-----------~ 419 (528)
... ...++|+| || ..|+.. ..+..|.+||+.+++......... .
T Consensus 286 ~~~~~~~~~~~~sp-------dg------~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~ 352 (388)
T 3pe7_A 286 SHLMSNYDGSLMVG-------DG------SDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVT 352 (388)
T ss_dssp EEEEECTTSSEEEE-------EE------CCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTT
T ss_pred eeeeecCCCCeEcc-------CC------CcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccC
Confidence 110 11237888 88 344432 556799999999987654433332 3
Q ss_pred CCCCeecCCCC
Q 009715 420 GGSPTFSTGSQ 430 (528)
Q Consensus 420 ~~~~~~s~~~~ 430 (528)
...+.|++++.
T Consensus 353 ~~~~~~spDg~ 363 (388)
T 3pe7_A 353 HPHPSFTPDDK 363 (388)
T ss_dssp CCCCEECTTSS
T ss_pred CCCccCCCCCC
Confidence 56778888874
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.59 E-value=1.4e-13 Score=148.14 Aligned_cols=196 Identities=9% Similarity=-0.075 Sum_probs=134.6
Q ss_pred CCCeEEEEECCCCCEEEEEeCC----------CcEEEEecCC------ceEEeeec-ccCCCeEEEEEcCCCCEEEEEeC
Q 009715 279 QGSINSIAFSTDGTYLATVGRD----------GYLRVFDYSK------EQLICGGK-SYYGALLCCAWSMDGKYILTGGE 341 (528)
Q Consensus 279 ~~~v~~l~~spdg~~l~s~~~d----------g~i~vwd~~~------~~~~~~~~-~~~~~v~~l~~sp~g~~l~sg~~ 341 (528)
...+..++|+|||+.|++++.+ ..|++||+.+ ++... +. .+...+..++|+|||++|+.++.
T Consensus 129 ~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~SpDG~~la~~~~ 207 (662)
T 3azo_A 129 GLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE-LSDDAHRFVTGPRLSPDGRQAVWLAW 207 (662)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE-SSCSCSSEECCCEECTTSSEEEEEEE
T ss_pred CccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE-EEecCCCcccCceECCCCCEEEEEEC
Confidence 3567899999999999998877 5899999987 55443 33 45567788999999999998775
Q ss_pred C--------CcEEEEECC-CC---eEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCC--eEEEEEccC
Q 009715 342 D--------DLVQVWSME-DR---KVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT--RLLLWDLEM 407 (528)
Q Consensus 342 d--------g~v~vwd~~-~~---~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~--~i~lwd~~~ 407 (528)
+ ..|++||+. ++ +......+|...+..++|+| || .+++++..|+ .|.+||+.+
T Consensus 208 ~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp-------dg------~l~~~~~~~~~~~l~~~~~~~ 274 (662)
T 3azo_A 208 DHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP-------DG------SLIVATDRTGWWNLHRVDPAT 274 (662)
T ss_dssp CTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT-------TS------CEEEEECTTSSCEEEEECTTT
T ss_pred CCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC-------CC------eEEEEECCCCCeEEEEEECCC
Confidence 4 379999999 56 45444555678999999999 99 6777777888 677777767
Q ss_pred CeEEEEeecCCCC---------CCCeecCCCCCccCCceeeeecCCCCceee--ecCCCCceEEeecCCCCeEEE-EEeC
Q 009715 408 DEIVVPLRRGPLG---------GSPTFSTGSQSAHWDNVCPVGTLQPAPSMR--DVPKLSPLVAHRVHTEPLSGL-IFTQ 475 (528)
Q Consensus 408 ~~~~~~~~~~~~~---------~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~--d~~~~~~~~~~~~h~~~V~~l-~~s~ 475 (528)
++....+...... ..+.|++++ ..+..... +...+| |.... .+..+..|...+..+ .++.
T Consensus 275 ~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~------~~~~~~~~-~~~~l~~~d~~~~-~~~~l~~~~~~~~~~~s~~~ 346 (662)
T 3azo_A 275 GAATQLCRREEEFAGPLWTPGMRWFAPLANG------LIAVVHGK-GAAVLGILDPESG-ELVDAAGPWTEWAATLTVSG 346 (662)
T ss_dssp CCEEESSCCSSBSSCCCCSTTCCSEEECTTS------CEEEEEBS-SSCEEEEEETTTT-EEEECCSSCCEEEEEEEEET
T ss_pred CceeecccccccccCccccccCceEeEeCCC------EEEEEEEc-CccEEEEEECCCC-cEEEecCCCCeEEEEEecCC
Confidence 7655443332222 223333333 33445555 777888 44433 466777787888888 7777
Q ss_pred Ce--EEEEECCCe--EEEEeCCCCc
Q 009715 476 ES--VLTVCREGH--IKIWMRPGVA 496 (528)
Q Consensus 476 d~--l~t~s~Dg~--i~iW~~~~~~ 496 (528)
+. +++++.+.. |.+|++.++.
T Consensus 347 ~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 347 TRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp TEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CEEEEEEcCCCCCCEEEEEECCCCc
Confidence 65 445555554 5555655544
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.58 E-value=2.6e-13 Score=133.02 Aligned_cols=207 Identities=13% Similarity=0.119 Sum_probs=141.3
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeee--ccCCcccCCceeEEEEee-CCCcEEEEEe-CCceEEEEEc
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHY--NKDGSVNNSRCTSVTWVP-GGDGAFVVGH-ADGNLYVYEK 240 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~~h~~~v~~l~~~p-~g~~~l~tg~-~dg~v~vwd~ 240 (528)
.++++.+++...++.|++||...... .+...... ......+......|+|+| ++. ++++.+ .++.|++|+.
T Consensus 99 d~~g~l~v~d~~~~~v~~~~~~g~~~----~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~~~ 173 (329)
T 3fvz_A 99 DTDGNYWVTDVALHQVFKLDPHSKEG----PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQFSP 173 (329)
T ss_dssp CTTSCEEEEETTTTEEEEECTTCSSC----CSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEEECT
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCeE----EEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEEcC
Confidence 78888777778889999999764210 00000000 000012455788999999 677 777775 6899999994
Q ss_pred CCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC-CCEEEEEeCCCcEEEEecCCceEEeeec-
Q 009715 241 SKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD-GTYLATVGRDGYLRVFDYSKEQLICGGK- 318 (528)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd-g~~l~s~~~dg~i~vwd~~~~~~~~~~~- 318 (528)
. +.....+...... .... ..+-..+..|+++|+ +.++++...++.|++||.++++.+..+.
T Consensus 174 ~--g~~~~~~~~~g~~----------~~~~-----~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~ 236 (329)
T 3fvz_A 174 S--GKFVTQWGEESSG----------SSPR-----PGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH 236 (329)
T ss_dssp T--SCEEEEECEECCS----------SSCC-----TTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred C--CCEEEEeccCCCC----------CCCC-----CcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec
Confidence 3 2211111100000 0000 001135789999998 7777777788999999999888887763
Q ss_pred -ccCCCeEEEEEcCCCCEEEEE-------eCCCcEEEEECCCCeEEEEee---cCCCCeEEEEEecCCCCCCCCCCccce
Q 009715 319 -SYYGALLCCAWSMDGKYILTG-------GEDDLVQVWSMEDRKVVAWGE---GHNSWVSGVAFDSYWSQPNSDGTAETV 387 (528)
Q Consensus 319 -~~~~~v~~l~~sp~g~~l~sg-------~~dg~v~vwd~~~~~~~~~~~---~h~~~V~~v~f~p~~~~~~~dg~~~~~ 387 (528)
.+...+..++++| +..+++. ..+..|++||+.+++.+..+. ++...+.+|+++| ||
T Consensus 237 ~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~-------dG----- 303 (329)
T 3fvz_A 237 ASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASE-------DG----- 303 (329)
T ss_dssp TTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECT-------TS-----
T ss_pred cccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECC-------CC-----
Confidence 3556788999999 4333333 334589999999999888873 6778899999999 99
Q ss_pred eEEEEEEeCCCeEEEEEccC
Q 009715 388 MYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 388 ~~~l~s~s~D~~i~lwd~~~ 407 (528)
.++++...+++|++|++..
T Consensus 304 -~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 304 -TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp -EEEEEESSSCCEEEEEEEE
T ss_pred -CEEEEECCCCEEEEEeCCc
Confidence 7899999999999999864
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.58 E-value=1.3e-13 Score=138.27 Aligned_cols=253 Identities=9% Similarity=0.030 Sum_probs=144.6
Q ss_pred CCCCCceeeccCCCCCC-----CccccCCcccCCcccCCCCCCcceeeeCCCccEEEEeCCCcEE--EEeCCCCCC--C-
Q 009715 95 GTGNGSRTLGFGGGNGG-----SKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIF--ISDLNSQDK--D- 164 (528)
Q Consensus 95 ~~~~g~~~~sf~gh~~~-----v~~v~~s~~~~~~~~s~s~~s~~~~~~~~~g~~~~~~~~~~i~--v~~~~~~~~--~- 164 (528)
...+|..+..+..+... +..+.++| ++..++..... +.+..++.++...... +........ .
T Consensus 16 d~~~g~~~~~l~~~~~~~~~~~~~~~~~Sp-dG~~l~~~~~~-------~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 87 (396)
T 3c5m_A 16 DSDTQVKVTRLTPTDIICHRNYFYQKCFTQ-DGKKLLFAGDF-------DGNRNYYLLNLETQQAVQLTEGKGDNTFGGF 87 (396)
T ss_dssp CTTTCCEEEECSCTTSCEECCCTTSCCBCT-TSCEEEEEECT-------TSSCEEEEEETTTTEEEECCCSSCBCTTTCE
T ss_pred cCCCCcceEEEecCCCCccceeeecCcCCC-CCCEEEEEEec-------CCCceEEEEECCCCcEEEeecCCCCccccce
Confidence 34455555555554433 67778887 44332222210 2233455565443321 111111111 1
Q ss_pred -CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeE-------------------EEEeeCCCc
Q 009715 165 -AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTS-------------------VTWVPGGDG 224 (528)
Q Consensus 165 -~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-------------------l~~~p~g~~ 224 (528)
+|+++.|+....++.|++||+...... .+. .. +...... +.|+|+++
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~~~~~---~~~---~~------~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~- 154 (396)
T 3c5m_A 88 ISTDERAFFYVKNELNLMKVDLETLEEQ---VIY---TV------DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS- 154 (396)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEE---EEE---EC------CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS-
T ss_pred ECCCCCEEEEEEcCCcEEEEECCCCCcE---EEE---ec------ccccCCCCCEEEeccCCccccccccccccCCCCc-
Confidence 889999999999999999998752100 000 00 1111111 34667776
Q ss_pred EEEEE-----eCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC-CCCEEEEEe
Q 009715 225 AFVVG-----HADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST-DGTYLATVG 298 (528)
Q Consensus 225 ~l~tg-----~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-dg~~l~s~~ 298 (528)
.++.. ..+..|++||+..+ ....+..+...+..+.|+| ++..|+..+
T Consensus 155 ~~~~~~~~~~~~~~~l~~~d~~~g---------------------------~~~~~~~~~~~~~~~~~sp~dg~~l~~~~ 207 (396)
T 3c5m_A 155 WEKFAEFYHTNPTCRLIKVDIETG---------------------------ELEVIHQDTAWLGHPIYRPFDDSTVGFCH 207 (396)
T ss_dssp HHHHHHHHHTCCCEEEEEEETTTC---------------------------CEEEEEEESSCEEEEEEETTEEEEEEEEE
T ss_pred ceeeeeeccCCCcceEEEEECCCC---------------------------cEEeeccCCcccccceECCCCCCEEEEEe
Confidence 44433 35567888887642 1122223456788999999 888787776
Q ss_pred CC------CcEEEEecCCceEEeeeccc-CCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeEEEEeecCCCCe
Q 009715 299 RD------GYLRVFDYSKEQLICGGKSY-YGALLCCAWSMDGKYILTGGED-----DLVQVWSMEDRKVVAWGEGHNSWV 366 (528)
Q Consensus 299 ~d------g~i~vwd~~~~~~~~~~~~~-~~~v~~l~~sp~g~~l~sg~~d-----g~v~vwd~~~~~~~~~~~~h~~~V 366 (528)
.+ ..|.+||+..++........ ...+..++|+|||++|+..+.+ +.|++||+.+++...... ... .
T Consensus 208 ~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~ 285 (396)
T 3c5m_A 208 EGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-C 285 (396)
T ss_dssp CSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-E
T ss_pred cCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-C
Confidence 54 36889998766543333311 2257789999999987776543 349999998886543322 122 2
Q ss_pred EEEEEecCCCCCCCCCCccceeEEEEEEe----------------CCCeEEEEEccCCeE
Q 009715 367 SGVAFDSYWSQPNSDGTAETVMYRFGSVG----------------QDTRLLLWDLEMDEI 410 (528)
Q Consensus 367 ~~v~f~p~~~~~~~dg~~~~~~~~l~s~s----------------~D~~i~lwd~~~~~~ 410 (528)
. +.|+|. || .+++.++ .+..|.+||+.+++.
T Consensus 286 ~-~~~s~~------dg------~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 286 S-HLMSNF------DG------SLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp E-EEEECS------SS------SEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred C-CCccCC------CC------ceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 3 788762 66 3555543 347899999887664
No 174
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.58 E-value=6.6e-13 Score=127.88 Aligned_cols=159 Identities=11% Similarity=0.040 Sum_probs=117.3
Q ss_pred cCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEEC
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFS 288 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 288 (528)
+.....+++|+|+++.+++++..++.|++|+... . ...+..+...+.+++|+
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~---------------------------~-~~~~~~~~~~~~~l~~~ 77 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG---------------------------Q-LSPEMHPSHHQNGHCLN 77 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS---------------------------C-EEEEESSCSSEEEEEEC
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCC---------------------------C-eEEEECCCCCcceeeEC
Confidence 4456789999999976788888899999999874 1 33344455778999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCceEEeeeccc----CCCeEEEEEcCCCCEEEEE----e-------------CCCcEEE
Q 009715 289 TDGTYLATVGRDGYLRVFDYSKEQLICGGKSY----YGALLCCAWSMDGKYILTG----G-------------EDDLVQV 347 (528)
Q Consensus 289 pdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----~~~v~~l~~sp~g~~l~sg----~-------------~dg~v~v 347 (528)
++|+++++...++.|.+||..+++........ ...+..++++|+|+++++. . ..+.|..
T Consensus 78 ~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~ 157 (296)
T 3e5z_A 78 KQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFR 157 (296)
T ss_dssp TTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEE
T ss_pred CCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEE
Confidence 99998877777789999999888764433221 2346789999999988873 2 1345666
Q ss_pred EECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc-CCeE
Q 009715 348 WSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE-MDEI 410 (528)
Q Consensus 348 wd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~-~~~~ 410 (528)
++.. ++. ..+..+......++|+| || ..+++.+.++.|.+||+. .++.
T Consensus 158 ~~~~-g~~-~~~~~~~~~~~gi~~s~-------dg------~~lv~~~~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 158 LAPD-GTL-SAPIRDRVKPNGLAFLP-------SG------NLLVSDTGDNATHRYCLNARGET 206 (296)
T ss_dssp ECTT-SCE-EEEECCCSSEEEEEECT-------TS------CEEEEETTTTEEEEEEECSSSCE
T ss_pred ECCC-CCE-EEeecCCCCCccEEECC-------CC------CEEEEeCCCCeEEEEEECCCCcC
Confidence 6655 443 34455677889999999 98 566777888999999987 4443
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.57 E-value=3.2e-13 Score=132.35 Aligned_cols=263 Identities=10% Similarity=0.028 Sum_probs=171.7
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
..|.+++|++++. .++....++.++.|.-. ....+..+...+.+++|+++
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~ 55 (333)
T 2dg1_A 6 QDLPTLFYSGKSN-SAVPIISESELQTITAE-----------------------------PWLEISKKGLQLEGLNFDRQ 55 (333)
T ss_dssp CCCCBCCSCGGGG-CSSCCCCGGGSCEEECE-----------------------------EEEEEESSCCCEEEEEECTT
T ss_pred cccceeeecCCcc-ceeEEeecccCcccccc-----------------------------eeEEEeccCccccCcEECCC
Confidence 3577788888887 56666778888888321 23333444567789999999
Q ss_pred CCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCeEEEEee--cCCC
Q 009715 291 GTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGED----DLVQVWSMEDRKVVAWGE--GHNS 364 (528)
Q Consensus 291 g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~d----g~v~vwd~~~~~~~~~~~--~h~~ 364 (528)
+++++++..++.|.+||.++++.......+...+.+++|+|+|+++++...+ +.|.+||.++++....+. .+..
T Consensus 56 g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 135 (333)
T 2dg1_A 56 GQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAY 135 (333)
T ss_dssp SCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCC
T ss_pred CCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCC
Confidence 9988888889999999999887655443456789999999999988877666 689999998876543332 2456
Q ss_pred CeEEEEEecCCCCCCCCCCccceeEEEEEEeC------CCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCcee
Q 009715 365 WVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQ------DTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVC 438 (528)
Q Consensus 365 ~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~------D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~ 438 (528)
.+.+++++| +| .++++... .+.|..||..+++.............+++++++. ..+
T Consensus 136 ~~~~i~~d~-------~g------~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~-----~l~ 197 (333)
T 2dg1_A 136 CIDDMVFDS-------KG------GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEK-----VLW 197 (333)
T ss_dssp CEEEEEECT-------TS------CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSS-----EEE
T ss_pred cccceEECC-------CC------CEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCC-----EEE
Confidence 799999999 88 55665543 3556666666555433222212234456666652 111
Q ss_pred eeecCCCCceeeecCC-CCceEE--------eecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCccccCC-C----
Q 009715 439 PVGTLQPAPSMRDVPK-LSPLVA--------HRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAESQSS-S---- 502 (528)
Q Consensus 439 ~~g~~~~~~~~~d~~~-~~~~~~--------~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~~~~-~---- 502 (528)
........+.+|+... ...+.. +.++ ..+..+++++++ +++...++.|.+|+..+....... .
T Consensus 198 v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~ 276 (333)
T 2dg1_A 198 VTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDE 276 (333)
T ss_dssp EEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGG
T ss_pred EEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCcc
Confidence 2223345677777753 222211 1122 467889999986 445556789999998654322221 1
Q ss_pred ----ccceEEEccCCceEEEeeee
Q 009715 503 ----SETVLSTSSKDKPLLSSKVV 522 (528)
Q Consensus 503 ----~~~vl~~spd~~~l~s~~~~ 522 (528)
...-++++||++.|+.++..
T Consensus 277 g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 277 GHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp TCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ccccCcceEEECCCCCEEEEEeCc
Confidence 11228889999888766554
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.57 E-value=1.4e-12 Score=124.81 Aligned_cols=186 Identities=13% Similarity=0.151 Sum_probs=131.1
Q ss_pred CCCeEEEEec-CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCC
Q 009715 167 DGHDLLIGLN-SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGA 245 (528)
Q Consensus 167 ~~~~l~~g~~-~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~ 245 (528)
+++.+++... ++.|++||...+ . .. .+. ..+...+.+++++|+|. ++++...++.|++|+... .
T Consensus 88 ~g~l~v~~~~~~~~i~~~d~~g~------~-~~--~~~---~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g--~ 152 (286)
T 1q7f_A 88 SGDIIVTERSPTHQIQIYNQYGQ------F-VR--KFG---ATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNG--N 152 (286)
T ss_dssp TTEEEEEECGGGCEEEEECTTSC------E-EE--EEC---TTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTS--C
T ss_pred CCeEEEEcCCCCCEEEEECCCCc------E-EE--Eec---CccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCC--C
Confidence 4444444433 788999984431 1 11 111 11345689999999998 888878889999999642 1
Q ss_pred CCCccccccccceeEEeccCCCCCCCeEEEe--ecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeeccc--C
Q 009715 246 GDSSFPVIKDQTQFSVAHPRYSKSNPIARWH--ICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSY--Y 321 (528)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~ 321 (528)
. +..+. .+...+..|+++++|+++++...++.|++||.. ++.+..+..+ .
T Consensus 153 ~-------------------------~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~ 206 (286)
T 1q7f_A 153 V-------------------------LHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGIT 206 (286)
T ss_dssp E-------------------------EEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTS
T ss_pred E-------------------------EEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCcc
Confidence 1 11111 123568899999999988877788999999985 5555555433 3
Q ss_pred CCeEEEEEcCCCCEEEEEeCCC-cEEEEECCCCeEEEEeecCC--CCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCC
Q 009715 322 GALLCCAWSMDGKYILTGGEDD-LVQVWSMEDRKVVAWGEGHN--SWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT 398 (528)
Q Consensus 322 ~~v~~l~~sp~g~~l~sg~~dg-~v~vwd~~~~~~~~~~~~h~--~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~ 398 (528)
..+..++++++|+++++...++ .|.+||. +++.+..+..+. ..+.+++++| +| .++++ +.|+
T Consensus 207 ~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~-------~g------~l~vs-~~~~ 271 (286)
T 1q7f_A 207 NYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMD-------DG------SVVLA-SKDY 271 (286)
T ss_dssp CSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEET-------TT------EEEEE-ETTT
T ss_pred CCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECC-------CC------cEEEE-CCCC
Confidence 5788999999999888887776 9999995 466666665443 3478999999 99 66666 6799
Q ss_pred eEEEEEccCC
Q 009715 399 RLLLWDLEMD 408 (528)
Q Consensus 399 ~i~lwd~~~~ 408 (528)
+|++|++...
T Consensus 272 ~v~v~~~~~~ 281 (286)
T 1q7f_A 272 RLYIYRYVQL 281 (286)
T ss_dssp EEEEEECSCC
T ss_pred eEEEEEcccc
Confidence 9999997653
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.56 E-value=6.3e-13 Score=130.87 Aligned_cols=238 Identities=16% Similarity=0.140 Sum_probs=138.8
Q ss_pred CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCC---ce--EEEEEcCCCCCCCCccc
Q 009715 177 SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHAD---GN--LYVYEKSKDGAGDSSFP 251 (528)
Q Consensus 177 ~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~d---g~--v~vwd~~~~~~~~~~~~ 251 (528)
++.|++||+.... . ..+ ..+..++|+|+|+ .|+..+.+ +. |++|++..+
T Consensus 42 ~~~l~~~d~~~~~-----~----~~l--------~~~~~~~~SpDg~-~la~~~~~~~~~~~~l~~~~~~~g-------- 95 (347)
T 2gop_A 42 ENTIVIENLKNNA-----R----RFI--------ENATMPRISPDGK-KIAFMRANEEKKVSEIWVADLETL-------- 95 (347)
T ss_dssp EEEEEEEETTTCC-----E----EEE--------ESCEEEEECTTSS-EEEEEEEETTTTEEEEEEEETTTT--------
T ss_pred cceEEEEeCCCCc-----e----EEc--------ccCCCeEECCCCC-EEEEEEeccCCCcceEEEEECCCC--------
Confidence 4578888887511 0 111 3578899999999 67666543 33 667776531
Q ss_pred cccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCC---------------------------CcEE
Q 009715 252 VIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRD---------------------------GYLR 304 (528)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~d---------------------------g~i~ 304 (528)
+...... +.. +..++|+|||+.|+.++.+ ..|.
T Consensus 96 ------------------~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (347)
T 2gop_A 96 ------------------SSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFW 155 (347)
T ss_dssp ------------------EEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEE
T ss_pred ------------------ceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEE
Confidence 1111112 223 8899999999999888642 5799
Q ss_pred EEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCC-------cEEEEECCCCeEEEEeecCCCCeEEEEEecCCCC
Q 009715 305 VFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDD-------LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQ 377 (528)
Q Consensus 305 vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg-------~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~ 377 (528)
+||+.+++.+..+.. . .+..++|+||| +++++..+. ...||.+++++. ..+..+ ..+..+ +|
T Consensus 156 ~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--sp---- 224 (347)
T 2gop_A 156 IFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DS---- 224 (347)
T ss_dssp EEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--EE----
T ss_pred EEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeE--CC----
Confidence 999998887444444 3 78899999999 777776542 344554445544 334334 555544 88
Q ss_pred CCCCCCccceeEEEEEEeCC--------CeEEEEEccCCeEEEEeecC-CCCCC-CeecCCCCCccCCceeeeecCCCCc
Q 009715 378 PNSDGTAETVMYRFGSVGQD--------TRLLLWDLEMDEIVVPLRRG-PLGGS-PTFSTGSQSAHWDNVCPVGTLQPAP 447 (528)
Q Consensus 378 ~~~dg~~~~~~~~l~s~s~D--------~~i~lwd~~~~~~~~~~~~~-~~~~~-~~~s~~~~~~~~d~~~~~g~~~~~~ 447 (528)
|| .+|+..+.+ ..|.+|| +++....+... ..... +.|+ + ..+..+..++..
T Consensus 225 ---dg------~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-d-------g~~~~~~~~~~~ 285 (347)
T 2gop_A 225 ---DG------ERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-G-------KVYFTLFEEGSV 285 (347)
T ss_dssp ---CS------SCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-T-------EEEEEEEETTEE
T ss_pred ---CC------CEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-C-------cEEEEEecCCcE
Confidence 98 456665543 4678888 44433222110 01111 2222 1 233444445555
Q ss_pred eeeecCCCCceEEeecCCCCeEEEEEeCCe-EEEEECCCeE-EEEeCC
Q 009715 448 SMRDVPKLSPLVAHRVHTEPLSGLIFTQES-VLTVCREGHI-KIWMRP 493 (528)
Q Consensus 448 ~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-l~t~s~Dg~i-~iW~~~ 493 (528)
.+| +...+. ..+..+...|.+++|+| . +++++.++.. .||.+.
T Consensus 286 ~l~-~~~g~~-~~~~~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 286 NLY-IWDGEI-KPIAKGRHWIMGFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEE-EESSSE-EEEECSSSEEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred EEE-EcCCce-EEEecCCCeEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence 666 543332 33334456667777777 4 4455555554 777766
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.56 E-value=1.4e-13 Score=148.20 Aligned_cols=262 Identities=11% Similarity=-0.027 Sum_probs=166.2
Q ss_pred cCCceeEEEEeeCCCcEEEEE--eCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeE---
Q 009715 209 NNSRCTSVTWVPGGDGAFVVG--HADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSIN--- 283 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg--~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~--- 283 (528)
|...+..++|+++.- +++.. ..++...||....++. . +.+..|...+.
T Consensus 22 ~~~~~~~~~~s~~~~-~~~~~~~~~~~~~~l~~~~~~~~-~-------------------------~~l~~~~~~~~~~~ 74 (662)
T 3azo_A 22 RSGRPACVGAVGDEV-WWVAPRPAEAGRATLVRRRADGA-E-------------------------ESALPAPWNVRNRV 74 (662)
T ss_dssp TCSCCEEEEEETTEE-EEEEEETTTTTEEEEEEECTTSC-E-------------------------EESSCTTCCBCCCG
T ss_pred cCCccceeEEcCCeE-EEEecCcccCCcEEEEEECCCCC-c-------------------------ceeCCCCccccccc
Confidence 788999999998765 66666 5688999999743221 1 11111222222
Q ss_pred ------EEEEC--CCCCE-EEEEeC-CCcEEEEecC--C-ceEEeeecc-----cCCCeEEEEEcCCCCEEEEEeCC---
Q 009715 284 ------SIAFS--TDGTY-LATVGR-DGYLRVFDYS--K-EQLICGGKS-----YYGALLCCAWSMDGKYILTGGED--- 342 (528)
Q Consensus 284 ------~l~~s--pdg~~-l~s~~~-dg~i~vwd~~--~-~~~~~~~~~-----~~~~v~~l~~sp~g~~l~sg~~d--- 342 (528)
.+.|+ |||++ |+.++. +..|.++++. . ++. ..+.. |...+..++|+|||+.|++++.|
T Consensus 75 ~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~-~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~ 153 (662)
T 3azo_A 75 FEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP-RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTG 153 (662)
T ss_dssp GGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCC-EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECS
T ss_pred cccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCC-EeccCCccCCCCccccCcEECCCCCEEEEEEecccC
Confidence 34454 99998 776654 5667777776 3 433 33443 55678899999999999988876
Q ss_pred -------CcEEEEECCC------CeEEEEee-cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC--------CeE
Q 009715 343 -------DLVQVWSMED------RKVVAWGE-GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD--------TRL 400 (528)
Q Consensus 343 -------g~v~vwd~~~------~~~~~~~~-~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D--------~~i 400 (528)
..|++||+.+ ++.. .+. .+...+..++|+| || .+|+.++.+ ..|
T Consensus 154 ~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~Sp-------DG------~~la~~~~~~~~~~~~~~~i 219 (662)
T 3azo_A 154 EGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSP-------DG------RQAVWLAWDHPRMPWEGTEL 219 (662)
T ss_dssp SSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECT-------TS------SEEEEEEECTTCCTTTCEEE
T ss_pred CCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECC-------CC------CEEEEEECCCCCCCCCCcEE
Confidence 5899999988 5543 444 5667888999999 99 577776654 379
Q ss_pred EEEEcc-CC---eEEEEeec-CCCCCCCeecCCCCCccCCceeeeecCCC--CceeeecCCCCceEEeecCCCC------
Q 009715 401 LLWDLE-MD---EIVVPLRR-GPLGGSPTFSTGSQSAHWDNVCPVGTLQP--APSMRDVPKLSPLVAHRVHTEP------ 467 (528)
Q Consensus 401 ~lwd~~-~~---~~~~~~~~-~~~~~~~~~s~~~~~~~~d~~~~~g~~~~--~~~~~d~~~~~~~~~~~~h~~~------ 467 (528)
++||+. ++ +....... ......+.|++++. .+.....++ .+..+|....+.......+...
T Consensus 220 ~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~------l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~ 293 (662)
T 3azo_A 220 KTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS------LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWT 293 (662)
T ss_dssp EEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC------EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCS
T ss_pred EEEEECCCCcccccEEeCCCCCceEcceEECCCCe------EEEEECCCCCeEEEEEECCCCceeecccccccccCcccc
Confidence 999998 56 43333332 24455677888873 223333444 3444454444433322233222
Q ss_pred --eEEEEEeCCe--EEEEECCCeEEEE--eCCCCccc-cCCCccceEEE-ccCCceEEEe
Q 009715 468 --LSGLIFTQES--VLTVCREGHIKIW--MRPGVAES-QSSSSETVLST-SSKDKPLLSS 519 (528)
Q Consensus 468 --V~~l~~s~d~--l~t~s~Dg~i~iW--~~~~~~~~-~~~~~~~vl~~-spd~~~l~s~ 519 (528)
+..++|++++ ++++.. +.++|| |+.++... ...+...+..+ ++|++.++..
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~ 352 (662)
T 3azo_A 294 PGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGV 352 (662)
T ss_dssp TTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEE
T ss_pred ccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEE
Confidence 5678898864 667777 999999 55554433 33445555555 7777766543
No 179
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.52 E-value=4.9e-12 Score=137.39 Aligned_cols=233 Identities=13% Similarity=0.088 Sum_probs=155.1
Q ss_pred CCCCCeEEEEecCC-----cEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCce-----
Q 009715 165 AKDGHDLLIGLNSG-----DVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGN----- 234 (528)
Q Consensus 165 ~~~~~~l~~g~~~G-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~----- 234 (528)
+||++.|+.+..++ +|++||+.+.. ...... ....+..++|+|||+ .|+.+..++.
T Consensus 133 SPDg~~la~~~~~~G~~~~~i~v~d~~tg~-----~~~~~~--------~~~~~~~~~wspDg~-~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 133 SEDGEYFAYGLSASGSDWVTIKFMKVDGAK-----ELPDVL--------ERVKFSCMAWTHDGK-GMFYNAYPQQDGKSD 198 (710)
T ss_dssp CTTSSEEEEEEEETTCSCEEEEEEETTTTE-----EEEEEE--------EEECSCCEEECTTSS-EEEEEECCCCSSCCS
T ss_pred CCCCCEEEEEEcCCCCceEEEEEEECCCCC-----CCcccc--------cCcccceEEEEeCCC-EEEEEEECCcccccc
Confidence 89999998877654 89999998621 111001 122367899999999 7777777665
Q ss_pred -----------EEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEee--cCCCeEEEEECCCCCEEEEEeC--
Q 009715 235 -----------LYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHI--CQGSINSIAFSTDGTYLATVGR-- 299 (528)
Q Consensus 235 -----------v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~spdg~~l~s~~~-- 299 (528)
|++|++.++... ....+.. |...+..+.|+|||++|+..+.
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~------------------------~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 254 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSE------------------------DILCAEFPDEPKWMGGAELSDDGRYVLLSIREG 254 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGG------------------------CEEEECCTTCTTCEEEEEECTTSCEEEEEEECS
T ss_pred ccccccCCCCEEEEEECCCCccc------------------------ceEEeccCCCCeEEEEEEEcCCCCEEEEEEEcc
Confidence 999998652210 0111111 2345778999999999988765
Q ss_pred ---CCcEEEEecCC------ce-EEeeecccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCe--EEEEeecCC
Q 009715 300 ---DGYLRVFDYSK------EQ-LICGGKSYYGALLCCAWSMDGKYILTGGED----DLVQVWSMEDRK--VVAWGEGHN 363 (528)
Q Consensus 300 ---dg~i~vwd~~~------~~-~~~~~~~~~~~v~~l~~sp~g~~l~sg~~d----g~v~vwd~~~~~--~~~~~~~h~ 363 (528)
+..|++||+.+ ++ ....+..+...+.. .|+|+|+.|+..+.+ ..|.+||+.++. ....+..|.
T Consensus 255 ~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 333 (710)
T 2xdw_A 255 CDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH 333 (710)
T ss_dssp SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC
T ss_pred CCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC
Confidence 56899999986 42 23444455555554 588999987766553 359999998764 233444454
Q ss_pred C--CeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCe--EEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceee
Q 009715 364 S--WVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTR--LLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCP 439 (528)
Q Consensus 364 ~--~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~--i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~ 439 (528)
. .+..++|.+ ++ .++++...|+. |.+||+.+++.+..+.
T Consensus 334 ~~~~~~~~~~~~-------~~------~lv~~~~~~g~~~l~~~~~~~g~~~~~l~------------------------ 376 (710)
T 2xdw_A 334 EKDVLEWVACVR-------SN------FLVLCYLHDVKNTLQLHDLATGALLKIFP------------------------ 376 (710)
T ss_dssp SSCEEEEEEEET-------TT------EEEEEEEETTEEEEEEEETTTCCEEEEEC------------------------
T ss_pred CCCeEEEEEEEc-------CC------EEEEEEEECCEEEEEEEECCCCCEEEecC------------------------
Confidence 4 688899987 77 78888888885 5556665665444332
Q ss_pred eecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EE-EEE---CCCeEEEEeCCCCc
Q 009715 440 VGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VL-TVC---REGHIKIWMRPGVA 496 (528)
Q Consensus 440 ~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~-t~s---~Dg~i~iW~~~~~~ 496 (528)
.+.+.|..+.++|+. |+ +.+ ..+.|.+||+.++.
T Consensus 377 -----------------------~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 377 -----------------------LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp -----------------------CCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred -----------------------CCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 244567788888863 33 332 34789999987654
No 180
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.51 E-value=6.4e-11 Score=123.99 Aligned_cols=297 Identities=10% Similarity=0.025 Sum_probs=193.7
Q ss_pred CCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCC
Q 009715 168 GHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGD 247 (528)
Q Consensus 168 ~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~ 247 (528)
+..+++...++.|.++|..+. +...... ....+..++|+|+|+ ++++++.|+.|.+||+....
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~------~v~~~i~-------~g~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~~~t--- 229 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTY------EIKTVLD-------TGYAVHISRLSASGR-YLFVIGRDGKVNMIDLWMKE--- 229 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTC------CEEEEEE-------CSSCEEEEEECTTSC-EEEEEETTSEEEEEETTSSS---
T ss_pred ceEEEEeCCCCeEEEEECCCC------eEEEEEe-------CCCCccceEECCCCC-EEEEEcCCCeEEEEECCCCC---
Confidence 344556667899999998762 1111111 223566899999999 88888999999999985111
Q ss_pred CccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEEC----CCCCEEEEEeC-CCcEEEEecCCceEEeeecc---
Q 009715 248 SSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFS----TDGTYLATVGR-DGYLRVFDYSKEQLICGGKS--- 319 (528)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s----pdg~~l~s~~~-dg~i~vwd~~~~~~~~~~~~--- 319 (528)
...+..+.. ......++|+ |||+++++++. ++.|.++|..+.+.+..+..
T Consensus 230 ---------------------~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~ 287 (567)
T 1qks_A 230 ---------------------PTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGM 287 (567)
T ss_dssp ---------------------CCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEE
T ss_pred ---------------------CcEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccc
Confidence 112222222 1346789999 69998888764 58999999999988776542
Q ss_pred -------cCC-CeEEEEEcCCCCE-EEEEeCCCcEEEEECCCCeEE--EEeecCCCCeEEEEEecCCCCCCCCCCcccee
Q 009715 320 -------YYG-ALLCCAWSMDGKY-ILTGGEDDLVQVWSMEDRKVV--AWGEGHNSWVSGVAFDSYWSQPNSDGTAETVM 388 (528)
Q Consensus 320 -------~~~-~v~~l~~sp~g~~-l~sg~~dg~v~vwd~~~~~~~--~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~ 388 (528)
|.. .+..+..++++.. ++....+|.|.++|....+.+ ..+ .......++.|+| ||+
T Consensus 288 ~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~p-------dgr----- 354 (567)
T 1qks_A 288 TYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDG-------SHR----- 354 (567)
T ss_dssp CTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECT-------TSC-----
T ss_pred ccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECC-------CCC-----
Confidence 112 5778888888664 445566799999999875432 233 2455678899999 983
Q ss_pred EEEEEEeCCCeEEEEEccCCeEEEEeec-C---CCCCCCee-cCCCCCccCCceeeeecC-CCCceeeecCC-------C
Q 009715 389 YRFGSVGQDTRLLLWDLEMDEIVVPLRR-G---PLGGSPTF-STGSQSAHWDNVCPVGTL-QPAPSMRDVPK-------L 455 (528)
Q Consensus 389 ~~l~s~s~D~~i~lwd~~~~~~~~~~~~-~---~~~~~~~~-s~~~~~~~~d~~~~~g~~-~~~~~~~d~~~-------~ 455 (528)
+++++...+++|.++|+.+++.+..+.. . ++.....| .+++. ....+..+ ++.+.++|... +
T Consensus 355 ~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g-----~v~~t~~~g~~~Vsvid~~~~~~~~~~~ 429 (567)
T 1qks_A 355 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFG-----PVWATSHMGDDSVALIGTDPEGHPDNAW 429 (567)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTE-----EEEEEEBSSSSEEEEEECCTTTCTTTBT
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCC-----cEEEeCCCCCCeEEEecCCCCCCccccC
Confidence 4556666789999999999998877765 2 22223333 34321 12223332 35677888766 6
Q ss_pred CceEEeecCCCCeEEEEEeCCe--EEEEEC-------CCeEEEEeCCCC-----cc---ccC-------C-Cccce--EE
Q 009715 456 SPLVAHRVHTEPLSGLIFTQES--VLTVCR-------EGHIKIWMRPGV-----AE---SQS-------S-SSETV--LS 508 (528)
Q Consensus 456 ~~~~~~~~h~~~V~~l~~s~d~--l~t~s~-------Dg~i~iW~~~~~-----~~---~~~-------~-~~~~v--l~ 508 (528)
+.+..+......-.-+.++|++ |..... ...|.++|+... .. ... . ....+ +.
T Consensus 430 kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (567)
T 1qks_A 430 KILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGE 509 (567)
T ss_dssp SEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEE
T ss_pred EEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeee
Confidence 6777777554433457789984 555442 369999998765 21 110 0 11223 88
Q ss_pred EccCCceEEEeee
Q 009715 509 TSSKDKPLLSSKV 521 (528)
Q Consensus 509 ~spd~~~l~s~~~ 521 (528)
++|||++|..+..
T Consensus 510 ~~~~G~~~~~s~~ 522 (567)
T 1qks_A 510 FNKDGTEVWFSVW 522 (567)
T ss_dssp ECTTSSEEEEEEE
T ss_pred ECCCCCEEEEEee
Confidence 9999999987744
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.51 E-value=3.7e-12 Score=120.57 Aligned_cols=199 Identities=9% Similarity=0.019 Sum_probs=140.7
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
..+.+++++++|. ++++.. ++.|.+|+.... ....+. ......+.+++++++
T Consensus 67 ~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~--~~~~~~------------------------~~~~~~p~~i~~~~~ 118 (270)
T 1rwi_B 67 YQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSN--NQTVLP------------------------FDGLNYPEGLAVDTQ 118 (270)
T ss_dssp CSCCCEEECTTCC-EEEEET-TTEEEEECTTCS--CCEECC------------------------CCSCSSEEEEEECTT
T ss_pred CCcceeEECCCCC-EEEEcC-CCEEEEEeCCCc--eEeeee------------------------cCCcCCCcceEECCC
Confidence 4578899999998 666655 889999997632 111110 001246789999999
Q ss_pred CCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEE
Q 009715 291 GTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 370 (528)
Q Consensus 291 g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~ 370 (528)
|+++++...++.|.+|+..+.............+..++++++|+++++...++.|.+||............+...+.+++
T Consensus 119 g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~ 198 (270)
T 1rwi_B 119 GAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA 198 (270)
T ss_dssp CCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEE
T ss_pred CCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEE
Confidence 99777777788999998765544332222334678899999999777777788999999987665544334446789999
Q ss_pred EecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceee
Q 009715 371 FDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMR 450 (528)
Q Consensus 371 f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~ 450 (528)
+++ +| .++++...++.|.+||........ +.
T Consensus 199 ~d~-------~g------~l~v~~~~~~~v~~~~~~~~~~~~-~~----------------------------------- 229 (270)
T 1rwi_B 199 VDE-------AG------TVYVTEHNTNQVVKLLAGSTTSTV-LP----------------------------------- 229 (270)
T ss_dssp ECT-------TC------CEEEEETTTSCEEEECTTCSCCEE-CC-----------------------------------
T ss_pred ECC-------CC------CEEEEECCCCcEEEEcCCCCccee-ec-----------------------------------
Confidence 999 88 577777778899999976543211 00
Q ss_pred ecCCCCceEEeecCCCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCcc
Q 009715 451 DVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAE 497 (528)
Q Consensus 451 d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~ 497 (528)
..+...+.++++++++ +++...++.|+++++...+.
T Consensus 230 -----------~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 230 -----------FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp -----------CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred -----------cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 0123457899999975 66777899999999876543
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.50 E-value=3.3e-12 Score=125.68 Aligned_cols=183 Identities=11% Similarity=0.171 Sum_probs=117.0
Q ss_pred CCCCCeEEEEecC---C--cEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCC-------
Q 009715 165 AKDGHDLLIGLNS---G--DVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHAD------- 232 (528)
Q Consensus 165 ~~~~~~l~~g~~~---G--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~d------- 232 (528)
+|||+.|+....+ + .|++||+.... . .. +.. +.. +..++|+|+|+ .|+.++.+
T Consensus 67 SpDg~~la~~~~~~~~~~~~l~~~~~~~g~-----~-~~---l~~----~~~-~~~~~wspdg~-~l~~~~~~~~~~~~~ 131 (347)
T 2gop_A 67 SPDGKKIAFMRANEEKKVSEIWVADLETLS-----S-KK---ILE----AKN-IRSLEWNEDSR-KLLIVGFKRREDEDF 131 (347)
T ss_dssp CTTSSEEEEEEEETTTTEEEEEEEETTTTE-----E-EE---EEE----ESE-EEEEEECTTSS-EEEEEEECCCC----
T ss_pred CCCCCEEEEEEeccCCCcceEEEEECCCCc-----e-EE---EEc----CCC-ccceeECCCCC-EEEEEEccCCCcCCc
Confidence 8999999887654 3 47777776411 1 10 110 223 89999999999 66666532
Q ss_pred --------------------ceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCC
Q 009715 233 --------------------GNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGT 292 (528)
Q Consensus 233 --------------------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~ 292 (528)
..|++|++..+ ..+..+.. . .+..++|+|||
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~--------------------------~~~~~l~~-~-~~~~~~~spdg- 182 (347)
T 2gop_A 132 IFEDDVPAWFDDLGFFDGEKTTFWIFDTESE--------------------------EVIEEFEK-P-RFSSGIWHRDK- 182 (347)
T ss_dssp -----CCCC---------CEEEEEEEETTTT--------------------------EEEEEEEE-E-TTCEEEEETTE-
T ss_pred EEEcccceeecCcccccCccceEEEEECCCC--------------------------eEEeeecC-C-CcccccCCCCe-
Confidence 46777777541 11122222 2 67789999999
Q ss_pred EEEEEeCCC-------cEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCC--------CcEEEEECCCCeEEE
Q 009715 293 YLATVGRDG-------YLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGED--------DLVQVWSMEDRKVVA 357 (528)
Q Consensus 293 ~l~s~~~dg-------~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~d--------g~v~vwd~~~~~~~~ 357 (528)
+++++..+. ...||.+++++... +..+ ..+..+ +|||++|+.++.+ ..|.+|| +++...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~ 256 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWEDGKEEK-MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMG 256 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEETTEEEE-EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEE
T ss_pred EEEEEecccccccccccccEEEeCCCceEE-eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEe
Confidence 777776542 33444444555433 3334 445444 9999988877654 3688888 566555
Q ss_pred EeecCCCCeEE-EEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEE
Q 009715 358 WGEGHNSWVSG-VAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVP 413 (528)
Q Consensus 358 ~~~~h~~~V~~-v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~ 413 (528)
....|...+.. +.|+ || ++++++.++.++|| +.+++....
T Consensus 257 l~~~~~~~~~~~~~~s--------dg-------~~~~~~~~~~~~l~-~~~g~~~~~ 297 (347)
T 2gop_A 257 ILDEVDRGVGQAKIKD--------GK-------VYFTLFEEGSVNLY-IWDGEIKPI 297 (347)
T ss_dssp SSTTCCSEEEEEEEET--------TE-------EEEEEEETTEEEEE-EESSSEEEE
T ss_pred ccccCCcccCCccEEc--------Cc-------EEEEEecCCcEEEE-EcCCceEEE
Confidence 55567777886 8884 33 78888999999999 886655433
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.50 E-value=7.2e-12 Score=124.40 Aligned_cols=257 Identities=11% Similarity=-0.006 Sum_probs=168.1
Q ss_pred CCCCCeEEEEec----------CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeC--C
Q 009715 165 AKDGHDLLIGLN----------SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHA--D 232 (528)
Q Consensus 165 ~~~~~~l~~g~~----------~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~--d 232 (528)
+++++.|+++.. ++.|.+||+.+.. .............+......++|+|+|+ +|+++.. +
T Consensus 58 spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~------~~~~i~~~~~~~~~g~~p~~i~~spdg~-~l~v~n~~~~ 130 (361)
T 2oiz_A 58 SNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT------FEKEISLPPKRVQGLNYDGLFRQTTDGK-FIVLQNASPA 130 (361)
T ss_dssp CTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC------EEEEEEECTTBCCBCCCGGGEEECTTSS-EEEEEEESSS
T ss_pred CCCCCEEEEEEecccccccCCCCCEEEEEECcCCc------EEEEEEcCccccccCCCcceEEECCCCC-EEEEECCCCC
Confidence 899999998863 5679999987511 1111111111111334567899999999 7777653 6
Q ss_pred ceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEE-EeecCCCeEEEEECCCC-CEEEEEeCCCcEEEEecCC
Q 009715 233 GNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIAR-WHICQGSINSIAFSTDG-TYLATVGRDGYLRVFDYSK 310 (528)
Q Consensus 233 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~spdg-~~l~s~~~dg~i~vwd~~~ 310 (528)
+.|.+||+.+.. . +.. +. ......+.+.|++ ..+++.+.||.+.+|++..
T Consensus 131 ~~v~v~d~~~~~-~-------------------------~~~~i~--~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 131 TSIGIVDVAKGD-Y-------------------------VEDVTA--AAGCWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp EEEEEEETTTTE-E-------------------------EEEEGG--GTTEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred CeEEEEECCCCc-E-------------------------EEEEec--CCCcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 899999998631 1 111 00 0122235567755 6778888999999999865
Q ss_pred -ceEEe------eecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe--EEEEee------cCCCC----eEEEEE
Q 009715 311 -EQLIC------GGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRK--VVAWGE------GHNSW----VSGVAF 371 (528)
Q Consensus 311 -~~~~~------~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~--~~~~~~------~h~~~----V~~v~f 371 (528)
++... .+.....++ .+.++|++..++..+.++.|.++|+.... .+..+. .+..+ ...++|
T Consensus 183 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~ 261 (361)
T 2oiz_A 183 DGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGL 261 (361)
T ss_dssp TSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEE
T ss_pred CCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEE
Confidence 55441 122222222 34457788888888889999999997543 222221 01111 123789
Q ss_pred ecCCCCCCCCCCccceeEEEEEEe----------CCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeee
Q 009715 372 DSYWSQPNSDGTAETVMYRFGSVG----------QDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVG 441 (528)
Q Consensus 372 ~p~~~~~~~dg~~~~~~~~l~s~s----------~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g 441 (528)
+| |++ .++++.. .+..|.+||+.+++.+..+..+. ...++|++++. .+.+.
T Consensus 262 ~~-------dg~-----~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~------~l~v~ 322 (361)
T 2oiz_A 262 HR-------ASG-----RMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRN------LMLTL 322 (361)
T ss_dssp ET-------TTT-----EEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTT------EEEEE
T ss_pred ec-------CCC-----eEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCC------EEEEe
Confidence 99 872 3444433 13589999999999999998877 88899999883 33334
Q ss_pred cCCCCceeeecCCC--CceEEeecCCCCeEEEEEeCCe
Q 009715 442 TLQPAPSMRDVPKL--SPLVAHRVHTEPLSGLIFTQES 477 (528)
Q Consensus 442 ~~~~~~~~~d~~~~--~~~~~~~~h~~~V~~l~~s~d~ 477 (528)
+. +.+.+||..+. +.+..+..+......++++|++
T Consensus 323 n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 323 DG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp CS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred CC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 44 88999999999 8888876677778899999974
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.50 E-value=3.6e-12 Score=138.05 Aligned_cols=222 Identities=9% Similarity=-0.027 Sum_probs=146.0
Q ss_pred cCCceeEEEEeeCCCcEEEE-----EeCCceEEEEEcCCCCCC-CCccccccccceeEEeccCCCCCCCeEEEeecCCCe
Q 009715 209 NNSRCTSVTWVPGGDGAFVV-----GHADGNLYVYEKSKDGAG-DSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSI 282 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~t-----g~~dg~v~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 282 (528)
|...+..++|+|||+ +|+. |+.+..|++||+.++... ...+. ....
T Consensus 119 ~~~~~~~~~~SPDG~-~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~---------------------------~~~~ 170 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGK-KVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE---------------------------GGKY 170 (695)
T ss_dssp SCEEEEEEEECTTSS-EEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS---------------------------CCTT
T ss_pred CCEEEEEEEECCCCC-EEEEEECCCCCceEEEEEEECCCCCCcCCcccC---------------------------cccc
Confidence 556789999999999 6662 334568999999863321 00000 0112
Q ss_pred EEEEECCCCCEEEEEeCCCc-------------EEEEecCCce----EEeeecccCCCeEEEEEcCCCCEEEEEeCCC--
Q 009715 283 NSIAFSTDGTYLATVGRDGY-------------LRVFDYSKEQ----LICGGKSYYGALLCCAWSMDGKYILTGGEDD-- 343 (528)
Q Consensus 283 ~~l~~spdg~~l~s~~~dg~-------------i~vwd~~~~~----~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg-- 343 (528)
..++|+|||+.|+.++.|.. |++|++.+++ ++.....+...+..+.|+|||++|+..+.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 57899999999999988776 9999998765 4444444556788999999999988877665
Q ss_pred --cEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe---CCCeEEEEEccCCeE--EEEeec
Q 009715 344 --LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG---QDTRLLLWDLEMDEI--VVPLRR 416 (528)
Q Consensus 344 --~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s---~D~~i~lwd~~~~~~--~~~~~~ 416 (528)
.|++||..+++. ..+..+...+....| + +| .+++... .++.|.+||+.+++. ...+
T Consensus 251 ~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~-------~g------~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l-- 313 (695)
T 2bkl_A 251 ENDVYWKRPGEKDF-RLLVKGVGAKYEVHA-W-------KD------RFYVLTDEGAPRQRVFEVDPAKPARASWKEI-- 313 (695)
T ss_dssp EEEEEEECTTCSSC-EEEEECSSCCEEEEE-E-------TT------EEEEEECTTCTTCEEEEEBTTBCSGGGCEEE--
T ss_pred ceEEEEEcCCCCce-EEeecCCCceEEEEe-c-------CC------cEEEEECCCCCCCEEEEEeCCCCCccCCeEE--
Confidence 677777665543 344446666666666 6 77 5333333 257899999876532 0111
Q ss_pred CCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecC-CCCeEEEEEeCCe-EEEEECCCeEEEEeCC-
Q 009715 417 GPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVH-TEPLSGLIFTQES-VLTVCREGHIKIWMRP- 493 (528)
Q Consensus 417 ~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h-~~~V~~l~~s~d~-l~t~s~Dg~i~iW~~~- 493 (528)
+..+ ...|..++|+.+. +++...|+..+||.+.
T Consensus 314 --------------------------------------------~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~ 349 (695)
T 2bkl_A 314 --------------------------------------------VPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATL 349 (695)
T ss_dssp --------------------------------------------ECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEET
T ss_pred --------------------------------------------ecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeC
Confidence 1111 3457778888655 7788889998888654
Q ss_pred -CCccccC--CCccce--EEEccCCceEEEe
Q 009715 494 -GVAESQS--SSSETV--LSTSSKDKPLLSS 519 (528)
Q Consensus 494 -~~~~~~~--~~~~~v--l~~spd~~~l~s~ 519 (528)
++..... .....+ ++++||++.|+..
T Consensus 350 ~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~ 380 (695)
T 2bkl_A 350 KGKPVRTVQLPGVGAASNLMGLEDLDDAYYV 380 (695)
T ss_dssp TCCEEEECCCSSSSEECCCBSCTTCSEEEEE
T ss_pred CCCeeEEecCCCCeEEEEeecCCCCCEEEEE
Confidence 3322222 223444 6678999888744
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.48 E-value=2.6e-12 Score=123.67 Aligned_cols=194 Identities=10% Similarity=0.029 Sum_probs=129.6
Q ss_pred CCCC-eEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 166 KDGH-DLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 166 ~~~~-~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
++++ .++++..++.|+.||.... . ..+. .+...+.+++|+|+|. ++++...++.|.+||..++.
T Consensus 37 ~~g~~l~~~~~~~~~i~~~~~~~~-------~---~~~~----~~~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 37 PARSAVIFSDVRQNRTWAWSDDGQ-------L---SPEM----HPSHHQNGHCLNKQGH-LIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTSC-------E---EEEE----SSCSSEEEEEECTTCC-EEEEETTTTEEEEECSTTCC
T ss_pred CCCCEEEEEeCCCCEEEEEECCCC-------e---EEEE----CCCCCcceeeECCCCc-EEEEecCCCeEEEEcCCCCc
Confidence 6676 6677788899999998762 1 1111 1456789999999998 77777777899999985421
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEE----e-------------CCCcEEEEe
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATV----G-------------RDGYLRVFD 307 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~----~-------------~dg~i~vwd 307 (528)
.. .+..... ......+..++++|+|+++++. + ..+.|..++
T Consensus 102 -~~-~~~~~~~--------------------~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~ 159 (296)
T 3e5z_A 102 -WE-SIADSFE--------------------GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA 159 (296)
T ss_dssp -EE-EEECEET--------------------TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEEC
T ss_pred -EE-EEeeccC--------------------CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEEC
Confidence 10 0000000 0012456789999999988873 2 134566666
Q ss_pred cCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC-CCeE---EEEeecCCCCeEEEEEecCCCCCCCCCC
Q 009715 308 YSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSME-DRKV---VAWGEGHNSWVSGVAFDSYWSQPNSDGT 383 (528)
Q Consensus 308 ~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~-~~~~---~~~~~~h~~~V~~v~f~p~~~~~~~dg~ 383 (528)
.. ++.. .+..+......++|+|+++++++...++.|.+||+. +++. ...+..+...+.++++++ +|
T Consensus 160 ~~-g~~~-~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~-------~G- 229 (296)
T 3e5z_A 160 PD-GTLS-APIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA-------GG- 229 (296)
T ss_dssp TT-SCEE-EEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT-------TS-
T ss_pred CC-CCEE-EeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC-------CC-
Confidence 55 4443 334455677899999999988777778999999997 4544 233334556678899999 98
Q ss_pred ccceeEEEEEEeCCCeEEEEEccCCeEEEEe
Q 009715 384 AETVMYRFGSVGQDTRLLLWDLEMDEIVVPL 414 (528)
Q Consensus 384 ~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 414 (528)
+++++. ++.|.+||.. ++.+..+
T Consensus 230 -----~l~v~~--~~~v~~~~~~-g~~~~~~ 252 (296)
T 3e5z_A 230 -----LIWASA--GDGVHVLTPD-GDELGRV 252 (296)
T ss_dssp -----CEEEEE--TTEEEEECTT-SCEEEEE
T ss_pred -----CEEEEc--CCeEEEECCC-CCEEEEE
Confidence 455554 8899999976 5544333
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.48 E-value=8.4e-12 Score=135.51 Aligned_cols=220 Identities=16% Similarity=0.122 Sum_probs=143.4
Q ss_pred CCeEEEEECCCCCEEEEEeCCC-----cEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCc----------
Q 009715 280 GSINSIAFSTDGTYLATVGRDG-----YLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDL---------- 344 (528)
Q Consensus 280 ~~v~~l~~spdg~~l~s~~~dg-----~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~---------- 344 (528)
..+..++|||||++||.+..++ .|++||+.+++.+.....+ ..+..++|+|||+.|+.+..++.
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccc
Confidence 3578899999999999876543 8999999999877543222 23667999999999999887765
Q ss_pred ------EEEEECCCCe----EEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeC-----CCeEEEEEccC--
Q 009715 345 ------VQVWSMEDRK----VVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQ-----DTRLLLWDLEM-- 407 (528)
Q Consensus 345 ------v~vwd~~~~~----~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~-----D~~i~lwd~~~-- 407 (528)
|++|++.+++ .+.....|...+..+.|+| || .+|+..+. +..|.+||+.+
T Consensus 204 ~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-------Dg------~~l~~~~~~~~~~~~~l~~~d~~~~~ 270 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-------DG------RYVLLSIREGCDPVNRLWYCDLQQES 270 (710)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-------TS------CEEEEEEECSSSSCCEEEEEEGGGSS
T ss_pred cCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC-------CC------CEEEEEEEccCCCccEEEEEECcccc
Confidence 9999998865 3333334667788999999 99 45555543 67899999986
Q ss_pred ----Ce-EEEEeecCCCCCCCeecCCCCCccCCceeee-ec---CCCCceeeecCCCCc--eEEeecCCC--CeEEEEEe
Q 009715 408 ----DE-IVVPLRRGPLGGSPTFSTGSQSAHWDNVCPV-GT---LQPAPSMRDVPKLSP--LVAHRVHTE--PLSGLIFT 474 (528)
Q Consensus 408 ----~~-~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~-g~---~~~~~~~~d~~~~~~--~~~~~~h~~--~V~~l~~s 474 (528)
+. ....+..........+++++. .+.+ .. ....+.++|+....+ ...+..|.. .|..++|+
T Consensus 271 ~~~~~~~~~~~l~~~~~~~~~~~s~dg~------~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~ 344 (710)
T 2xdw_A 271 NGITGILKWVKLIDNFEGEYDYVTNEGT------VFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV 344 (710)
T ss_dssp SSSCSSCCCEEEECSSSSCEEEEEEETT------EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE
T ss_pred cccCCccceEEeeCCCCcEEEEEeccCC------EEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE
Confidence 43 234444322222223444442 2211 11 123467778776542 345555544 68889999
Q ss_pred CC-e-EEEEECCCe--EEEEeCCCCc--cccCCCccce--EEEccCCceEEEe
Q 009715 475 QE-S-VLTVCREGH--IKIWMRPGVA--ESQSSSSETV--LSTSSKDKPLLSS 519 (528)
Q Consensus 475 ~d-~-l~t~s~Dg~--i~iW~~~~~~--~~~~~~~~~v--l~~spd~~~l~s~ 519 (528)
++ . +++...|+. |++|++..+. .....+...+ ++++||++.|+..
T Consensus 345 ~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 345 RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp TTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEE
T ss_pred cCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEE
Confidence 54 3 677778885 5666774443 2222334444 6678999877644
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.46 E-value=1e-11 Score=117.51 Aligned_cols=193 Identities=10% Similarity=-0.013 Sum_probs=135.2
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
.++++ |+++..++.|++||...... . .+. ......+.+++++++|. ++++...++.|.+|+.....
T Consensus 75 ~~~g~-l~v~~~~~~i~~~d~~~~~~------~---~~~---~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~ 140 (270)
T 1rwi_B 75 DGAGT-VYVTDFNNRVVTLAAGSNNQ------T---VLP---FDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKT 140 (270)
T ss_dssp CTTCC-EEEEETTTEEEEECTTCSCC------E---ECC---CCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCS
T ss_pred CCCCC-EEEEcCCCEEEEEeCCCceE------e---eee---cCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCce
Confidence 56777 44444488999998765211 0 010 01234688999999998 77777778899999654211
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCe
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGAL 324 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v 324 (528)
. ... .......+.+++++++|+++++...++.|.+||............+...+
T Consensus 141 ~---~~~-----------------------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p 194 (270)
T 1rwi_B 141 Q---TVL-----------------------PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAP 194 (270)
T ss_dssp C---EEC-----------------------CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSE
T ss_pred e---Eee-----------------------ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCc
Confidence 0 000 00112356789999999977777778899999998766554433344678
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEE
Q 009715 325 LCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWD 404 (528)
Q Consensus 325 ~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd 404 (528)
..++++++|.++++...++.|.+||............+...+.++++++ +| .++++...+++|++++
T Consensus 195 ~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~-------~g------~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 195 WGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDS-------DR------TVYVADRGNDRVVKLT 261 (270)
T ss_dssp EEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECT-------TC------CEEEEEGGGTEEEEEC
T ss_pred eEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECC-------CC------CEEEEECCCCEEEEEc
Confidence 8999999998777777788999999876554433333446789999999 98 6888888999999999
Q ss_pred ccCCeE
Q 009715 405 LEMDEI 410 (528)
Q Consensus 405 ~~~~~~ 410 (528)
+...+.
T Consensus 262 ~~~~~~ 267 (270)
T 1rwi_B 262 SLEHHH 267 (270)
T ss_dssp CCGGGS
T ss_pred CCCccc
Confidence 876543
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.45 E-value=3.5e-11 Score=117.69 Aligned_cols=229 Identities=13% Similarity=0.059 Sum_probs=147.1
Q ss_pred cCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEEC
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFS 288 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 288 (528)
+...+.+++|+|+|. +++++..++.|++||..... .......+...+.+++|+
T Consensus 43 ~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~--------------------------~~~~~~~~~~~~~~i~~~ 95 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKE--------------------------IKRPFVSHKANPAAIKIH 95 (333)
T ss_dssp SCCCEEEEEECTTSC-EEEEETTTCEEEEECTTTCC--------------------------EEEEEECSSSSEEEEEEC
T ss_pred cCccccCcEECCCCC-EEEEECCCCEEEEEeCCCCc--------------------------EEEEeeCCCCCcceEEEC
Confidence 445678999999998 88888889999999986421 111111234679999999
Q ss_pred CCCCEEEEEeCC----CcEEEEecCCceEEeeec--ccCCCeEEEEEcCCCCEEEEEeC------CCcEEEEECCCCeEE
Q 009715 289 TDGTYLATVGRD----GYLRVFDYSKEQLICGGK--SYYGALLCCAWSMDGKYILTGGE------DDLVQVWSMEDRKVV 356 (528)
Q Consensus 289 pdg~~l~s~~~d----g~i~vwd~~~~~~~~~~~--~~~~~v~~l~~sp~g~~l~sg~~------dg~v~vwd~~~~~~~ 356 (528)
++++++++...+ +.|.+||.++++....+. .....+..++++|+|+++++... .+.|..||.+.++..
T Consensus 96 ~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (333)
T 2dg1_A 96 KDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT 175 (333)
T ss_dssp TTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE
T ss_pred CCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE
Confidence 999988877666 689999998776542222 23457899999999998777654 355666776655543
Q ss_pred EEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC-CeEEEEe------ecC--CCCCCCeecC
Q 009715 357 AWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM-DEIVVPL------RRG--PLGGSPTFST 427 (528)
Q Consensus 357 ~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~-~~~~~~~------~~~--~~~~~~~~s~ 427 (528)
.. ..+...+..++|+| ||+ .++++...++.|.+||+.. +.....+ ... .....+++.+
T Consensus 176 ~~-~~~~~~~~~i~~~~-------dg~-----~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~ 242 (333)
T 2dg1_A 176 PI-IQNISVANGIALST-------DEK-----VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDS 242 (333)
T ss_dssp EE-EEEESSEEEEEECT-------TSS-----EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBT
T ss_pred Ee-ecCCCcccceEECC-------CCC-----EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECC
Confidence 32 23445688999999 882 2455666788999999964 3322211 110 1122344444
Q ss_pred CCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCC------CeEEEEEeCCe--EEEEECC
Q 009715 428 GSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTE------PLSGLIFTQES--VLTVCRE 484 (528)
Q Consensus 428 ~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~------~V~~l~~s~d~--l~t~s~D 484 (528)
++. .......++.+.+||. ..+.+..+..+.. .+.+++|+||+ |+.++.+
T Consensus 243 ~G~------l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 243 DDN------LYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp TCC------EEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCC------EEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 431 1122223456788877 4555556554433 68899999974 6555544
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.44 E-value=4.9e-10 Score=107.25 Aligned_cols=187 Identities=7% Similarity=-0.009 Sum_probs=129.0
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
.+++..+++...++.|+.||...+. ..+... .....+.++++.++|. ++++...++.|.+|+.. +
T Consensus 65 ~~~g~l~v~~~~~~~i~~~~~~g~~----------~~~~~~--~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~--g 129 (299)
T 2z2n_A 65 SSDGEVWFTENAANKIGRITKKGII----------KEYTLP--NPDSAPYGITEGPNGD-IWFTEMNGNRIGRITDD--G 129 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECTTSCE----------EEEECS--STTCCEEEEEECTTSC-EEEEETTTTEEEEECTT--C
T ss_pred CCCCCEEEeCCCCCeEEEECCCCcE----------EEEeCC--CcCCCceeeEECCCCC-EEEEecCCceEEEECCC--C
Confidence 5667666665567889999865311 011100 1345688999999998 77777778899999872 2
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEee-ecccCCC
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICG-GKSYYGA 323 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~ 323 (528)
... .+. ...+...+..+++.++++++++...++.|.+||. +++.... .......
T Consensus 130 ~~~-~~~-----------------------~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~ 184 (299)
T 2z2n_A 130 KIR-EYE-----------------------LPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASG 184 (299)
T ss_dssp CEE-EEE-----------------------CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCC
T ss_pred CEE-Eec-----------------------CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCc
Confidence 110 000 0012356889999999988777777789999999 6665432 2333456
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE-eecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEE
Q 009715 324 LLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAW-GEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLL 402 (528)
Q Consensus 324 v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~-~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~l 402 (528)
+..++++++++++++...++.|.+||. +++.... +..+...+.++++++ +| .++++...++.|..
T Consensus 185 ~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~-------~g------~l~v~~~~~~~i~~ 250 (299)
T 2z2n_A 185 PVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGA-------GI------DLWFTEWGANKIGR 250 (299)
T ss_dssp EEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECS-------TT------CEEEEETTTTEEEE
T ss_pred ceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECC-------CC------CEEEeccCCceEEE
Confidence 889999999997777767889999999 6654332 333557799999999 88 56666657889999
Q ss_pred EEc
Q 009715 403 WDL 405 (528)
Q Consensus 403 wd~ 405 (528)
||.
T Consensus 251 ~d~ 253 (299)
T 2z2n_A 251 LTS 253 (299)
T ss_dssp EET
T ss_pred ECC
Confidence 998
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.44 E-value=1.3e-11 Score=117.55 Aligned_cols=193 Identities=12% Similarity=0.103 Sum_probs=144.0
Q ss_pred CCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccC-CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 166 KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNN-SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 166 ~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
..++.|+++..++.|++||..+. +.+ ..+.. +. ..+.++++.|+|+ +|+ +.++.|+.||. + +
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG-----~~~---w~~~~----~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~-G 65 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTK-----EIV---WEYPL----EKGWECNSVAATKAGE-ILF--SYSKGAKMITR-D-G 65 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTT-----EEE---EEEEC----CTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-T-S
T ss_pred CCCcEEEeeCCCCEEEEEECCCC-----eEE---EEeCC----CccCCCcCeEECCCCC-EEE--eCCCCEEEECC-C-C
Confidence 35678899999999999998551 111 11111 22 4688999999998 777 45778999987 3 2
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeec-CCCeEEEEECCCCCEEEEEeC-CCcEEEEecCCceEEeeecc---
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHIC-QGSINSIAFSTDGTYLATVGR-DGYLRVFDYSKEQLICGGKS--- 319 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~spdg~~l~s~~~-dg~i~vwd~~~~~~~~~~~~--- 319 (528)
. .+..+..+ ...+.++.+.++|++|++.+. ++.|..+|. +++.+..+..
T Consensus 66 ~-------------------------~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~ 119 (276)
T 3no2_A 66 R-------------------------ELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETG 119 (276)
T ss_dssp C-------------------------EEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCS
T ss_pred C-------------------------EEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCC
Confidence 2 23333332 246788999999999999887 778888886 5777665531
Q ss_pred ---cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeC
Q 009715 320 ---YYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQ 396 (528)
Q Consensus 320 ---~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~ 396 (528)
+......+++.++|+++++...++.|..||.+ ++.+..+..+ ..+.++.+.+ +| ..++++..
T Consensus 120 ~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~-------~g------~~~v~~~~ 184 (276)
T 3no2_A 120 IERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLD-------NG------DCLVACGD 184 (276)
T ss_dssp CSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECT-------TS------CEEEECBT
T ss_pred CCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcC-------CC------CEEEEeCC
Confidence 11234556789999999999999999999998 9998888754 4566778888 88 68888888
Q ss_pred CCeEEEEEccCCeEEEEeec
Q 009715 397 DTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 397 D~~i~lwd~~~~~~~~~~~~ 416 (528)
+++|..+|..+++.+..+..
T Consensus 185 ~~~v~~~d~~tG~~~w~~~~ 204 (276)
T 3no2_A 185 AHCFVQLNLESNRIVRRVNA 204 (276)
T ss_dssp TSEEEEECTTTCCEEEEEEG
T ss_pred CCeEEEEeCcCCcEEEEecC
Confidence 88999999999999988864
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.44 E-value=3.8e-11 Score=117.50 Aligned_cols=262 Identities=11% Similarity=-0.018 Sum_probs=168.5
Q ss_pred cCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccc
Q 009715 176 NSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKD 255 (528)
Q Consensus 176 ~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~ 255 (528)
.++.|.++|..+... ...................+.+. ++. ++++...++.|.+||..+.
T Consensus 15 ~~~~l~~~d~~t~~~------~~~i~~~~n~~~lg~~~~~i~~~-~~~-lyv~~~~~~~v~viD~~t~------------ 74 (328)
T 3dsm_A 15 SNATLSYYDPATCEV------ENEVFYRANGFKLGDVAQSMVIR-DGI-GWIVVNNSHVIFAIDINTF------------ 74 (328)
T ss_dssp CCBEEEEEETTTTEE------ECSHHHHHHSSCCBSCEEEEEEE-TTE-EEEEEGGGTEEEEEETTTC------------
T ss_pred CCceEEEEECCCCEE------hhhhHhhhcCcccCccceEEEEE-CCE-EEEEEcCCCEEEEEECccc------------
Confidence 478899999876211 10000000011122346777774 344 6777777899999998762
Q ss_pred cceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccC-----CCeEEEEEc
Q 009715 256 QTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYY-----GALLCCAWS 330 (528)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-----~~v~~l~~s 330 (528)
+.+..+. .......++++++++.+++...++.|.+||+.+++....+.... .....+++
T Consensus 75 --------------~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~- 138 (328)
T 3dsm_A 75 --------------KEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ- 138 (328)
T ss_dssp --------------CEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-
T ss_pred --------------EEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-
Confidence 1222222 23567899999988544444378999999999998876655322 14556777
Q ss_pred CCCCEEEEEe-CCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC----------Ce
Q 009715 331 MDGKYILTGG-EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD----------TR 399 (528)
Q Consensus 331 p~g~~l~sg~-~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D----------~~ 399 (528)
.+++++++.. .++.|.+||+++++.+..+.. ......++++| +| ++++++..+ +.
T Consensus 139 ~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~-------dG------~l~v~~~~~~~~~~~~~~~~~ 204 (328)
T 3dsm_A 139 YGKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDK-------YN------KMWTITDGGYEGSPYGYEAPS 204 (328)
T ss_dssp ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECT-------TS------EEEEEBCCBCTTCSSCBCCCE
T ss_pred ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcC-------CC------CEEEEECCCccCCccccCCce
Confidence 3444444443 488999999999998887763 34467889999 99 666666554 79
Q ss_pred EEEEEccCCeEEEEeec--CCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEE--eecCCCCeEEEEEeC
Q 009715 400 LLLWDLEMDEIVVPLRR--GPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVA--HRVHTEPLSGLIFTQ 475 (528)
Q Consensus 400 i~lwd~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~--~~~h~~~V~~l~~s~ 475 (528)
|.+||..+++....+.. ......+++++++. .+.+... .+.++|..+.+.... +..+......++++|
T Consensus 205 v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~------~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp 276 (328)
T 3dsm_A 205 LYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRD------TLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNP 276 (328)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCEEEEECTTSC------EEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECT
T ss_pred EEEEECCCCeEEEEEecCCCCCceeEEEecCCC------EEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcC
Confidence 99999999998877754 23456677777652 2222221 677788776554311 111245788999998
Q ss_pred C-e-E-EEE----ECCCeEEEEeCCCC
Q 009715 476 E-S-V-LTV----CREGHIKIWMRPGV 495 (528)
Q Consensus 476 d-~-l-~t~----s~Dg~i~iW~~~~~ 495 (528)
+ + | ++. ..++.|.+||..+.
T Consensus 277 ~~g~lyva~~~~y~~~~~V~v~d~~g~ 303 (328)
T 3dsm_A 277 NNGEVYVADAIDYQQQGIVYRYSPQGK 303 (328)
T ss_dssp TTCCEEEEECTTSSSEEEEEEECTTCC
T ss_pred CCCeEEEEcccccccCCEEEEECCCCC
Confidence 4 3 4 444 46789999998843
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.44 E-value=1.9e-09 Score=112.82 Aligned_cols=310 Identities=12% Similarity=0.047 Sum_probs=185.5
Q ss_pred CCccEEEEeCCCcEEEEeCCCCCCC-----CCCCCeEEEEecCCcEEEEEcc--ccccccccceeeeeeeccCCcccCCc
Q 009715 140 GKGTYIIFNVGDAIFISDLNSQDKD-----AKDGHDLLIGLNSGDVYSVSLR--QQLQDVGKKLVGAHHYNKDGSVNNSR 212 (528)
Q Consensus 140 ~~g~~~~~~~~~~i~v~~~~~~~~~-----~~~~~~l~~g~~~G~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~h~~~ 212 (528)
.++.+.+++....-.+..+..+... ++|+++++++..+|.|.+||+. +. ..+.... ....
T Consensus 175 ~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~------~~v~~i~-------~G~~ 241 (567)
T 1qks_A 175 DAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP------TTVAEIK-------IGSE 241 (567)
T ss_dssp TTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC------CEEEEEE-------CCSE
T ss_pred CCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC------cEeEEEe-------cCCC
Confidence 4555555555443333333322221 8999999999999999999995 31 1111111 1223
Q ss_pred eeEEEEe----eCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeec-CCCeEEEEE
Q 009715 213 CTSVTWV----PGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHIC-QGSINSIAF 287 (528)
Q Consensus 213 v~~l~~~----p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~ 287 (528)
...++|+ |+|+.++++...+++|.|+|..+.. ....++..... ... ...| ...+..+.+
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~-~~~~i~~~~~~------------~~~---~~~~p~~rva~i~~ 305 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE-PKKIQSTRGMT------------YDE---QEYHPEPRVAAILA 305 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC-EEEEEECCEEC------------TTT---CCEESCCCEEEEEE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc-EEEEEeccccc------------ccc---ccccCCCceEEEEE
Confidence 5789999 6999555555667999999976521 11111100000 000 0001 125778888
Q ss_pred CCCCCE-EEEEeCCCcEEEEecCCceEE--eeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEeec--
Q 009715 288 STDGTY-LATVGRDGYLRVFDYSKEQLI--CGGKSYYGALLCCAWSMDGKYILTGG-EDDLVQVWSMEDRKVVAWGEG-- 361 (528)
Q Consensus 288 spdg~~-l~s~~~dg~i~vwd~~~~~~~--~~~~~~~~~v~~l~~sp~g~~l~sg~-~dg~v~vwd~~~~~~~~~~~~-- 361 (528)
++++.. ++....+|.|.++|..+.+.+ ..+ ........+.|+|++++++++. .++.|.++|+.+++.+..+.-
T Consensus 306 s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg 384 (567)
T 1qks_A 306 SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGG 384 (567)
T ss_dssp CSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred cCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccC
Confidence 887654 444556799999999865432 222 2334577889999999887665 578999999999988766653
Q ss_pred ---CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe-CCCeEEEEEccC-------CeEEEEeecCCCC-CCCeecCCC
Q 009715 362 ---HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG-QDTRLLLWDLEM-------DEIVVPLRRGPLG-GSPTFSTGS 429 (528)
Q Consensus 362 ---h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s-~D~~i~lwd~~~-------~~~~~~~~~~~~~-~~~~~s~~~ 429 (528)
|.+.-..+ ++| ++. .++++.. .++.|.++|... .+.+..+...... ..+.+++++
T Consensus 385 ~~Phpg~g~~~-~~p-------~~g-----~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~ 451 (567)
T 1qks_A 385 QTPHPGRGANF-VHP-------TFG-----PVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNS 451 (567)
T ss_dssp SSBCCTTCEEE-EET-------TTE-----EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTC
T ss_pred cCCCCccceee-ECC-------CCC-----cEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCC
Confidence 33212122 577 641 3444543 468999999987 5677777754222 334556665
Q ss_pred CCccCCceeeeec-------CCCCceeeecCCC-----C-ceEEeec--------CCCCeEEEEEeCCe--E-EEEE---
Q 009715 430 QSAHWDNVCPVGT-------LQPAPSMRDVPKL-----S-PLVAHRV--------HTEPLSGLIFTQES--V-LTVC--- 482 (528)
Q Consensus 430 ~~~~~d~~~~~g~-------~~~~~~~~d~~~~-----~-~~~~~~~--------h~~~V~~l~~s~d~--l-~t~s--- 482 (528)
. .+-+-. ....+.++|+.+. . .+..+.. -...+..++|++++ + ++..
T Consensus 452 ~------~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~ 525 (567)
T 1qks_A 452 Q------YLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGK 525 (567)
T ss_dssp S------EEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCT
T ss_pred C------eEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCC
Confidence 3 111111 1347788887765 2 2233321 13468899999985 4 4432
Q ss_pred -CCCeEEEEeCCCCccc
Q 009715 483 -REGHIKIWMRPGVAES 498 (528)
Q Consensus 483 -~Dg~i~iW~~~~~~~~ 498 (528)
.++.|.|+|..+.+..
T Consensus 526 ~~~~~i~v~D~~t~~~~ 542 (567)
T 1qks_A 526 DQESALVVVDDKTLELK 542 (567)
T ss_dssp TSCCEEEEEETTTTEEE
T ss_pred CCCCcEEEEECCCceEE
Confidence 3799999998887643
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.42 E-value=3.5e-11 Score=114.61 Aligned_cols=208 Identities=9% Similarity=0.001 Sum_probs=148.4
Q ss_pred EEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecC-CCeEEEEECCCCCEEEEEeCCCcE
Q 009715 225 AFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQ-GSINSIAFSTDGTYLATVGRDGYL 303 (528)
Q Consensus 225 ~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~spdg~~l~s~~~dg~i 303 (528)
+|++++.|+.|++||..++ +.+..+..+. ..+.++.++|+|++|+ +.++.|
T Consensus 7 ~lv~~~~~~~v~~~d~~tG--------------------------~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V 58 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTK--------------------------EIVWEYPLEKGWECNSVAATKAGEILF--SYSKGA 58 (276)
T ss_dssp EEEECTTCSEEEEEETTTT--------------------------EEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEE
T ss_pred EEEeeCCCCEEEEEECCCC--------------------------eEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCE
Confidence 8999999999999998652 2333334343 4688999999999888 457789
Q ss_pred EEEecCCceEEeeecccC-CCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCeEEEEee------cCCCCeEEEEEecCC
Q 009715 304 RVFDYSKEQLICGGKSYY-GALLCCAWSMDGKYILTGGE-DDLVQVWSMEDRKVVAWGE------GHNSWVSGVAFDSYW 375 (528)
Q Consensus 304 ~vwd~~~~~~~~~~~~~~-~~v~~l~~sp~g~~l~sg~~-dg~v~vwd~~~~~~~~~~~------~h~~~V~~v~f~p~~ 375 (528)
..||. +++.+..+.... ..+.++.+.++|+++++.+. ++.|..+|. +++.+..+. .+......+++.+
T Consensus 59 ~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-- 134 (276)
T 3no2_A 59 KMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK-- 134 (276)
T ss_dssp EEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT--
T ss_pred EEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC--
Confidence 99999 799888887643 46888999999999999887 778888885 677766654 1223455667777
Q ss_pred CCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCC
Q 009715 376 SQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKL 455 (528)
Q Consensus 376 ~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~ 455 (528)
+| .++++...++.|..||.. ++.+..+..........+.+++ ..+........+..+|..++
T Consensus 135 -----~G------~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g------~~~v~~~~~~~v~~~d~~tG 196 (276)
T 3no2_A 135 -----KG------NYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNG------DCLVACGDAHCFVQLNLESN 196 (276)
T ss_dssp -----TS------CEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTS------CEEEECBTTSEEEEECTTTC
T ss_pred -----CC------CEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCC------CEEEEeCCCCeEEEEeCcCC
Confidence 88 688999999999999998 9999988765333334443333 23333444456777887778
Q ss_pred CceEEeecCC------CCeEEEEEeCCe-EEEEE
Q 009715 456 SPLVAHRVHT------EPLSGLIFTQES-VLTVC 482 (528)
Q Consensus 456 ~~~~~~~~h~------~~V~~l~~s~d~-l~t~s 482 (528)
+.+..+..+. ..+..++..+++ ++.++
T Consensus 197 ~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 197 RIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp CEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred cEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 8877776432 126677777765 43333
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.40 E-value=8.7e-10 Score=105.47 Aligned_cols=261 Identities=9% Similarity=-0.005 Sum_probs=165.7
Q ss_pred cCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEEC
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFS 288 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 288 (528)
+...+.++++.++|. ++++...++.|.+||.. . .. ..+. ...+...+.++++.
T Consensus 13 ~~~~~~~i~~d~~g~-l~v~~~~~~~v~~~d~~-~-~~-~~~~-----------------------~~~~~~~~~~i~~~ 65 (299)
T 2z2n_A 13 QDTGPYGITVSDKGK-VWITQHKANMISCINLD-G-KI-TEYP-----------------------LPTPDAKVMCLTIS 65 (299)
T ss_dssp SSCCEEEEEECTTSC-EEEEETTTTEEEEECTT-C-CE-EEEE-----------------------CSSTTCCEEEEEEC
T ss_pred cCCCccceEECCCCC-EEEEecCCCcEEEEcCC-C-Ce-EEec-----------------------CCcccCceeeEEEC
Confidence 446799999999998 66666668899999876 2 11 0000 00123578899999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCceEE-eeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE-eecCCCCe
Q 009715 289 TDGTYLATVGRDGYLRVFDYSKEQLI-CGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAW-GEGHNSWV 366 (528)
Q Consensus 289 pdg~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~-~~~h~~~V 366 (528)
+++.++++...++.|..||.. ++.. ..+......+..+++.++++++++...++.|.+||. +++.... +..+...+
T Consensus 66 ~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~ 143 (299)
T 2z2n_A 66 SDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYP 143 (299)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred CCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCC
Confidence 999988877778889999987 4332 222224457889999999998888777889999998 5544322 23345678
Q ss_pred EEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEE-eec-CCCCCCCeecCCCCCccCCceeeeecCC
Q 009715 367 SGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVP-LRR-GPLGGSPTFSTGSQSAHWDNVCPVGTLQ 444 (528)
Q Consensus 367 ~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~-~~~-~~~~~~~~~s~~~~~~~~d~~~~~g~~~ 444 (528)
..+++++ +| .++++...++.|..||. +++.... +.. ......+++.+++. ........
T Consensus 144 ~~i~~~~-------~g------~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~------l~v~~~~~ 203 (299)
T 2z2n_A 144 SFITLGS-------DN------ALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA------LWFVEIIG 203 (299)
T ss_dssp EEEEECT-------TS------CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS------EEEEETTT
T ss_pred ceEEEcC-------CC------CEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC------EEEEccCC
Confidence 9999999 88 56666667789999998 6655432 111 11122344444432 11222224
Q ss_pred CCceeeecCCCCceE-EeecCCCCeEEEEEeCCe-EEEEE-CCCeEEEEeCCCCcccc--CCCccce--EEEccCCceEE
Q 009715 445 PAPSMRDVPKLSPLV-AHRVHTEPLSGLIFTQES-VLTVC-REGHIKIWMRPGVAESQ--SSSSETV--LSTSSKDKPLL 517 (528)
Q Consensus 445 ~~~~~~d~~~~~~~~-~~~~h~~~V~~l~~s~d~-l~t~s-~Dg~i~iW~~~~~~~~~--~~~~~~v--l~~spd~~~l~ 517 (528)
..+..++. ..+... ....+...+.++++++++ |..+. .++.|.+|+..+..... ......+ +++ ++|+..+
T Consensus 204 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~-~~g~l~v 281 (299)
T 2z2n_A 204 NKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIKSAEPHGICF-DGETIWF 281 (299)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETTTEEEEEECSSSSCCEEEEEE-CSSCEEE
T ss_pred ceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCCCceEEEeCCCCCCccceEEe-cCCCEEE
Confidence 45666766 443222 122345678999999975 55554 67899999985422211 1112223 777 8887766
Q ss_pred Eee
Q 009715 518 SSK 520 (528)
Q Consensus 518 s~~ 520 (528)
+..
T Consensus 282 ~~~ 284 (299)
T 2z2n_A 282 AME 284 (299)
T ss_dssp EET
T ss_pred Eec
Confidence 543
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.40 E-value=5.9e-11 Score=129.47 Aligned_cols=222 Identities=10% Similarity=0.009 Sum_probs=139.8
Q ss_pred cCCceeEEEEeeCCCcEEEEEeCC-----ceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeE
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHAD-----GNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSIN 283 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 283 (528)
|...+..++|+|||+ +|+.+..+ ..|++||+.++.. +. ...+...+.
T Consensus 161 ~~~~~~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl~tg~~--------------------------~~-~~~~~~~~~ 212 (741)
T 1yr2_A 161 GATALDAWAASDDGR-LLAYSVQDGGSDWRTVKFVGVADGKP--------------------------LA-DELKWVKFS 212 (741)
T ss_dssp --EEEEEEEECTTSS-EEEEEEEETTCSEEEEEEEETTTCCE--------------------------EE-EEEEEEESC
T ss_pred CCEEEEeEEECCCCC-EEEEEEcCCCCceEEEEEEECCCCCC--------------------------CC-ccCCCceec
Confidence 334688999999999 66665433 3699999976321 00 001111234
Q ss_pred EEEECCCCCEEEEEeCCCc--------------EEEEecCCce----EEeeecccCCCeEEEEEcCCCCEEEEEeCCC--
Q 009715 284 SIAFSTDGTYLATVGRDGY--------------LRVFDYSKEQ----LICGGKSYYGALLCCAWSMDGKYILTGGEDD-- 343 (528)
Q Consensus 284 ~l~~spdg~~l~s~~~dg~--------------i~vwd~~~~~----~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg-- 343 (528)
.++|+|| +.|+.+..++. |++|++.+++ ++.....+...+..+.|+|||++|+..+.++
T Consensus 213 ~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 291 (741)
T 1yr2_A 213 GLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTD 291 (741)
T ss_dssp CCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTC
T ss_pred cEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCC
Confidence 7899999 99998887654 8899997654 3333333334588999999999988776543
Q ss_pred ---cEEEEECCCC--eEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeC----CCeEEEEEccCCe-EEEE
Q 009715 344 ---LVQVWSMEDR--KVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQ----DTRLLLWDLEMDE-IVVP 413 (528)
Q Consensus 344 ---~v~vwd~~~~--~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~----D~~i~lwd~~~~~-~~~~ 413 (528)
.|++||+.++ ++...+..+...+....+ | +| ..|+..+. +..|.+||+.++. ....
T Consensus 292 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~-~-------dg------~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 357 (741)
T 1yr2_A 292 PVNTVHVARVTNGKIGPVTALIPDLKAQWDFVD-G-------VG------DQLWFVSGDGAPLKKIVRVDLSGSTPRFDT 357 (741)
T ss_dssp SCCEEEEEEEETTEECCCEEEECSSSSCEEEEE-E-------ET------TEEEEEECTTCTTCEEEEEECSSSSCEEEE
T ss_pred CcceEEEEECCCCCCcccEEecCCCCceEEEEe-c-------cC------CEEEEEECCCCCCCEEEEEeCCCCccccEE
Confidence 8999999876 414455556555555544 6 77 34555543 3459999987642 1111
Q ss_pred eecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe-EEEEECCCeEEEEeC
Q 009715 414 LRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES-VLTVCREGHIKIWMR 492 (528)
Q Consensus 414 ~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-l~t~s~Dg~i~iW~~ 492 (528)
+. ..+...+.++.|..+. +++...|+..+||.+
T Consensus 358 l~----------------------------------------------~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 358 VV----------------------------------------------PESKDNLESVGIAGNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp EE----------------------------------------------CCCSSEEEEEEEEBTEEEEEEEETTEEEEEEE
T ss_pred Ee----------------------------------------------cCCCCeEEEEEEECCEEEEEEEECCEEEEEEE
Confidence 11 1233446677887665 677788998777765
Q ss_pred C--CCccccCC--Cccce--EEEccCCceEEEe
Q 009715 493 P--GVAESQSS--SSETV--LSTSSKDKPLLSS 519 (528)
Q Consensus 493 ~--~~~~~~~~--~~~~v--l~~spd~~~l~s~ 519 (528)
. ++...... ....+ ++++||++.|+..
T Consensus 392 ~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~ 424 (741)
T 1yr2_A 392 DLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLS 424 (741)
T ss_dssp ETTSCEEEECBCSSSCEEEEEECCBTCSCEEEE
T ss_pred eCCCCceeeccCCCCeEEEEeecCCCCCEEEEE
Confidence 4 43322222 23444 6678999877743
No 196
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.39 E-value=1.3e-11 Score=133.57 Aligned_cols=191 Identities=10% Similarity=0.012 Sum_probs=124.2
Q ss_pred CCCCCeEEEEec-----CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCce-----
Q 009715 165 AKDGHDLLIGLN-----SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGN----- 234 (528)
Q Consensus 165 ~~~~~~l~~g~~-----~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~----- 234 (528)
+|||+.|+.... +.+|++||+.+.. ... .. .........++|+|||+ .|+.++.|..
T Consensus 129 SPDG~~la~~~~~~G~~~~~i~v~dl~tg~-----~~~------~~-~~~~~~~~~~~wspDg~-~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 129 SWDGKKVAFAQKPNAADEAVLHVIDVDSGE-----WSK------VD-VIEGGKYATPKWTPDSK-GFYYEWLPTDPSIKV 195 (695)
T ss_dssp CTTSSEEEEEEEETTCSCCEEEEEETTTCC-----BCS------SC-CBSCCTTCCCEECTTSS-EEEEEECCCCTTSCG
T ss_pred CCCCCEEEEEECCCCCceEEEEEEECCCCC-----CcC------Cc-ccCcccccceEEecCCC-EEEEEEecCCCCCcc
Confidence 899999985543 3579999998721 110 00 00111226799999999 7888887765
Q ss_pred --------EEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCC----c
Q 009715 235 --------LYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDG----Y 302 (528)
Q Consensus 235 --------v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg----~ 302 (528)
|++|++.++.... ..+.....|...+..+.|+|||++|+..+.++ .
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~----------------------~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~ 253 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKD----------------------TVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSEND 253 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGC----------------------EEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEE
T ss_pred ccCCCCCEEEEEECCCCchhc----------------------eEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceE
Confidence 9999987532100 00111112345788999999999998887666 6
Q ss_pred EEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEe---CCCcEEEEECCCCeE---EEEeecC-CCCeEEEEEecCC
Q 009715 303 LRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGG---EDDLVQVWSMEDRKV---VAWGEGH-NSWVSGVAFDSYW 375 (528)
Q Consensus 303 i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~---~dg~v~vwd~~~~~~---~~~~~~h-~~~V~~v~f~p~~ 375 (528)
|++||..+++... +..+...+....| ++|.+++... .++.|.+||+.+++. ...+..+ ...+..++|+
T Consensus 254 l~~~~~~~~~~~~-l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--- 328 (695)
T 2bkl_A 254 VYWKRPGEKDFRL-LVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--- 328 (695)
T ss_dssp EEEECTTCSSCEE-EEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE---
T ss_pred EEEEcCCCCceEE-eecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE---
Confidence 7888776554433 3345555666666 5666444444 257899999987653 3333333 4467888886
Q ss_pred CCCCCCCCccceeEEEEEEeCCCeEEEEEcc
Q 009715 376 SQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 406 (528)
Q Consensus 376 ~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~ 406 (528)
++ .++++...|+..+||.+.
T Consensus 329 -----~~------~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 329 -----GG------HLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp -----TT------EEEEEEEETTEEEEEEEE
T ss_pred -----CC------EEEEEEEECCEEEEEEEe
Confidence 44 689999999999998765
No 197
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.38 E-value=5.9e-10 Score=108.97 Aligned_cols=216 Identities=12% Similarity=0.033 Sum_probs=149.9
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q 009715 281 SINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGE 360 (528)
Q Consensus 281 ~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~ 360 (528)
....+.+. +++.+++...++.|.+||..+++.+..+. .......++++++++++++...++.|.+||..+++....+.
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence 45677774 34455555667899999999999988775 34668899999998555554478999999999998877766
Q ss_pred cCC-----CCeEEEEEecCCCCCCCCCCccceeEEEEEEe-CCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccC
Q 009715 361 GHN-----SWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG-QDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHW 434 (528)
Q Consensus 361 ~h~-----~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s-~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 434 (528)
... .....+++ . ++ .++++.. .++.|.+||+.+++.+..+........+.+++++.
T Consensus 123 ~g~~~~~~~~p~~i~~-~-------~~------~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~---- 184 (328)
T 3dsm_A 123 CPDMDMESGSTEQMVQ-Y-------GK------YVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNK---- 184 (328)
T ss_dssp CTTCCTTTCBCCCEEE-E-------TT------EEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSE----
T ss_pred cCCccccCCCcceEEE-E-------CC------EEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCC----
Confidence 332 15567777 4 66 5566654 58999999999999988887766667778877663
Q ss_pred CceeeeecC----------CCCceeeecCCCCceEEeecC-CCCeEEEEEeCCe--EEEEECCCeEEEEeCCCCccccCC
Q 009715 435 DNVCPVGTL----------QPAPSMRDVPKLSPLVAHRVH-TEPLSGLIFTQES--VLTVCREGHIKIWMRPGVAESQSS 501 (528)
Q Consensus 435 d~~~~~g~~----------~~~~~~~d~~~~~~~~~~~~h-~~~V~~l~~s~d~--l~t~s~Dg~i~iW~~~~~~~~~~~ 501 (528)
.+..... ...+.++|..+.+....+... ......++|+|++ |+.+.. .|.+||..+++.....
T Consensus 185 --l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~ 260 (328)
T 3dsm_A 185 --MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRP 260 (328)
T ss_dssp --EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSC
T ss_pred --EEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeee
Confidence 1111111 256888888877766665533 2368999999963 555443 8999999876643211
Q ss_pred ------CccceEEEccCCceEEEee
Q 009715 502 ------SSETVLSTSSKDKPLLSSK 520 (528)
Q Consensus 502 ------~~~~vl~~spd~~~l~s~~ 520 (528)
....-++++|+++.|..+.
T Consensus 261 ~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 261 FLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp SBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred eecCCCCceEEEEEcCCCCeEEEEc
Confidence 1122289999766666554
No 198
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.33 E-value=5.6e-10 Score=110.02 Aligned_cols=283 Identities=8% Similarity=0.011 Sum_probs=169.9
Q ss_pred CCCCeEEEEec-----CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEe----------
Q 009715 166 KDGHDLLIGLN-----SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGH---------- 230 (528)
Q Consensus 166 ~~~~~l~~g~~-----~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~---------- 230 (528)
|+++.+++... ++.|.++|..+.. ...... ....+ . ++++|+|+ +++++.
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~------v~~~I~------vG~~P-~-va~spDG~-~lyVan~~~~r~~~G~ 106 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGR------VIGMID------GGFLP-N-PVVADDGS-FIAHASTVFSRIARGE 106 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTE------EEEEEE------ECSSC-E-EEECTTSS-CEEEEEEEEEETTEEE
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCe------EEEEEE------CCCCC-c-EEECCCCC-EEEEEcccccccccCC
Confidence 44555554443 4678888876521 111111 12223 4 99999999 555554
Q ss_pred CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeec-------CCCeEEEEECCCCCEEEEEeC--CC
Q 009715 231 ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHIC-------QGSINSIAFSTDGTYLATVGR--DG 301 (528)
Q Consensus 231 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~l~~spdg~~l~s~~~--dg 301 (528)
.++.|.+||..+.. .+..+... ......+.|+|||++|+++.. ++
T Consensus 107 ~~~~VsviD~~t~~--------------------------v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~ 160 (386)
T 3sjl_D 107 RTDYVEVFDPVTLL--------------------------PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAP 160 (386)
T ss_dssp EEEEEEEECTTTCC--------------------------EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSC
T ss_pred CCCEEEEEECCCCe--------------------------EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCC
Confidence 36789999987621 22222211 124557999999999998874 68
Q ss_pred cEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-CeEEEEeecC----CCCeE-EEEEe-cC
Q 009715 302 YLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMED-RKVVAWGEGH----NSWVS-GVAFD-SY 374 (528)
Q Consensus 302 ~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~-~~~~~~~~~h----~~~V~-~v~f~-p~ 374 (528)
.|.++|+.+++.+..+.. .+ . ...+....+.+++.+.||.+.+.++.. ++.......+ ...+. ...|. +
T Consensus 161 ~VsVID~~t~~vv~tI~v-~g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~- 236 (386)
T 3sjl_D 161 AVGVVDLEGKAFKRMLDV-PD-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK- 236 (386)
T ss_dssp EEEEEETTTTEEEEEEEC-CS-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT-
T ss_pred eEEEEECCCCcEEEEEEC-CC-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC-
Confidence 999999999999888753 12 1 223333456677888899999999876 5543222111 11221 23554 4
Q ss_pred CCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCe--EEEEeec-----------CCCCCCCeecCCCCCccCCcee-ee
Q 009715 375 WSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDE--IVVPLRR-----------GPLGGSPTFSTGSQSAHWDNVC-PV 440 (528)
Q Consensus 375 ~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~--~~~~~~~-----------~~~~~~~~~s~~~~~~~~d~~~-~~ 440 (528)
+| ++++ .+.++.|.+.|+..+. .+..+.. ......+.+++++. ..+ ..
T Consensus 237 ------dG------~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~-----~lyV~~ 298 (386)
T 3sjl_D 237 ------AG------RLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALD-----RIYLLV 298 (386)
T ss_dssp ------TT------EEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTT-----EEEEEE
T ss_pred ------CC------cEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCC-----eEEEEe
Confidence 77 4433 6668999999997664 3333320 01122344444331 111 11
Q ss_pred e-----c---CCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe---EEEE-ECCCeEEEEeCCCCccccC---CCccc
Q 009715 441 G-----T---LQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES---VLTV-CREGHIKIWMRPGVAESQS---SSSET 505 (528)
Q Consensus 441 g-----~---~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~---l~t~-s~Dg~i~iW~~~~~~~~~~---~~~~~ 505 (528)
. + -...+.+.|..+.+.+..+..- ..+.+|+|++|+ |+++ ..++.|.++|..+.+.... .....
T Consensus 299 ~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~ 377 (386)
T 3sjl_D 299 DQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGP 377 (386)
T ss_dssp EECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSC
T ss_pred ccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCc
Confidence 1 0 1135778899999988887642 367899999984 5554 4589999999988774333 22223
Q ss_pred eEEEccC
Q 009715 506 VLSTSSK 512 (528)
Q Consensus 506 vl~~spd 512 (528)
-|.+++|
T Consensus 378 ~l~~s~d 384 (386)
T 3sjl_D 378 QVITTAD 384 (386)
T ss_dssp CEEEECC
T ss_pred eeEECCc
Confidence 3777776
No 199
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.32 E-value=4.3e-11 Score=118.44 Aligned_cols=167 Identities=8% Similarity=0.049 Sum_probs=128.9
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEecCCce-----------EEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q 009715 280 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQ-----------LICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVW 348 (528)
Q Consensus 280 ~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~-----------~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vw 348 (528)
..++.+++++...++++|+.++ +++|+++..+ .... ..+.. |..|+| |+.+|+++ .++.|++|
T Consensus 38 ~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 3688999999999999999875 6669875332 1111 23556 999999 99999999 88999999
Q ss_pred ECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCC
Q 009715 349 SMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTG 428 (528)
Q Consensus 349 d~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~ 428 (528)
|+++.........|...+.++.+.+ . .++++..||.|.+||+..+....
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~-------p--------~~av~~~dG~L~v~dl~~~~~~~---------------- 160 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVN-------N--------TLVILNSVNDLSALDLRTKSTKQ---------------- 160 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECS-------S--------EEEEEETTSEEEEEETTTCCEEE----------------
T ss_pred EchhhhccCccceeecceeeEEecC-------C--------CEEEEECCCCEEEEEccCCcccc----------------
Confidence 9988765556667888898888765 1 38888999999999998766431
Q ss_pred CCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCeEEEEECCCeEEEEeCCCCcc---ccC-----
Q 009715 429 SQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCREGHIKIWMRPGVAE---SQS----- 500 (528)
Q Consensus 429 ~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~l~t~s~Dg~i~iW~~~~~~~---~~~----- 500 (528)
+...|++++|+|++++.+..||+|++|+...... ...
T Consensus 161 -----------------------------------~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~ 205 (388)
T 1xip_A 161 -----------------------------------LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSE 205 (388)
T ss_dssp -----------------------------------EEESEEEEEECSSEEEEEETTSCEEEEEEETTEEEEEEEECCCHH
T ss_pred -----------------------------------ccCCceEEEEcCCceEEEEcCCcEEEEcCCCccccccceecCCcc
Confidence 2346999999999999999999999998877652 111
Q ss_pred -----CCccce--EEEccCCceEEE
Q 009715 501 -----SSSETV--LSTSSKDKPLLS 518 (528)
Q Consensus 501 -----~~~~~v--l~~spd~~~l~s 518 (528)
.|...| +.|.+++++|++
T Consensus 206 ~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 206 LEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp HHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cccccCCCeeEEEEEEecCCeEEEE
Confidence 244455 777899999875
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.32 E-value=1.1e-09 Score=105.73 Aligned_cols=239 Identities=12% Similarity=0.114 Sum_probs=150.4
Q ss_pred CceeEEEEeeCCCcEEEE-------EeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeE
Q 009715 211 SRCTSVTWVPGGDGAFVV-------GHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSIN 283 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~t-------g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 283 (528)
....+++|++++. ++++ +..++.|.+|+...... ..+.. + ...++...+.
T Consensus 18 ~~~~~~~~~~~g~-l~~~~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~------------------~--~~~~~~~~~~ 74 (314)
T 1pjx_A 18 PGAEGPVFDKNGD-FYIVAPEVEVNGKPAGEILRIDLKTGKK--TVICK------------------P--EVNGYGGIPA 74 (314)
T ss_dssp TTCEEEEECTTSC-EEEEETTCEETTEECCEEEEECTTTCCE--EEEEC------------------C--EETTEECCEE
T ss_pred CCccCceECCCCC-EEEEEeccccCCCCCCEEEEEeCCCCcE--EEEEe------------------c--ccCCCCCCCc
Confidence 3567899999987 7776 57788999999754211 00000 0 0001235688
Q ss_pred EEEECCC-CCEEEEEeCCCcEEEEecCCceEEee-ecc----cCCCeEEEEEcCCCCEEEEEeCC---------------
Q 009715 284 SIAFSTD-GTYLATVGRDGYLRVFDYSKEQLICG-GKS----YYGALLCCAWSMDGKYILTGGED--------------- 342 (528)
Q Consensus 284 ~l~~spd-g~~l~s~~~dg~i~vwd~~~~~~~~~-~~~----~~~~v~~l~~sp~g~~l~sg~~d--------------- 342 (528)
+++++++ ++++++. ....|.+||.+ ++.... ... ....+.+++++++|+++++...+
T Consensus 75 ~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~ 152 (314)
T 1pjx_A 75 GCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKF 152 (314)
T ss_dssp EEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSC
T ss_pred eEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCC
Confidence 9999999 6644444 44579999998 765443 221 12357899999999987776554
Q ss_pred CcEEEEECCCCeEEEEeecCCCCeEEEEEe----cCCCCCCCCCCccceeEE-EEEEeCCCeEEEEEcc-CCeEE-----
Q 009715 343 DLVQVWSMEDRKVVAWGEGHNSWVSGVAFD----SYWSQPNSDGTAETVMYR-FGSVGQDTRLLLWDLE-MDEIV----- 411 (528)
Q Consensus 343 g~v~vwd~~~~~~~~~~~~h~~~V~~v~f~----p~~~~~~~dg~~~~~~~~-l~s~s~D~~i~lwd~~-~~~~~----- 411 (528)
+.|..||.. ++..... .+......++|+ | || .. +++...++.|.+||+. .++..
T Consensus 153 ~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~-------dg------~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~ 217 (314)
T 1pjx_A 153 GSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDG-------RP------YQLIVAETPTKKLWSYDIKGPAKIENKKVW 217 (314)
T ss_dssp EEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTS-------CE------EEEEEEETTTTEEEEEEEEETTEEEEEEEE
T ss_pred CeEEEECCC-CCEEEec-cCCCCcceEEEecccCC-------CC------CEEEEEECCCCeEEEEECCCCCccccceEE
Confidence 567777766 5543333 344567899999 8 87 44 4555678999999987 45421
Q ss_pred EEeecC--CCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEE-ECCCe
Q 009715 412 VPLRRG--PLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTV-CREGH 486 (528)
Q Consensus 412 ~~~~~~--~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~-s~Dg~ 486 (528)
..+... .....+++.+++. ........+.+.+||..+.+.+..+..+...+.+++|++++ |+.+ ..++.
T Consensus 218 ~~~~~~~~~~p~~i~~d~~G~------l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~ 291 (314)
T 1pjx_A 218 GHIPGTHEGGADGMDFDEDNN------LLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNA 291 (314)
T ss_dssp EECCCCSSCEEEEEEEBTTCC------EEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTE
T ss_pred EECCCCCCCCCCceEECCCCC------EEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCe
Confidence 111111 1112234444431 11222235567888877666677777777889999999974 5444 45689
Q ss_pred EEEEeCCCC
Q 009715 487 IKIWMRPGV 495 (528)
Q Consensus 487 i~iW~~~~~ 495 (528)
|..|++...
T Consensus 292 l~~~~~~~~ 300 (314)
T 1pjx_A 292 VWKFEWQRN 300 (314)
T ss_dssp EEEEECSSC
T ss_pred EEEEeCCCC
Confidence 999998643
No 201
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.31 E-value=8.5e-11 Score=116.30 Aligned_cols=164 Identities=10% Similarity=-0.001 Sum_probs=117.3
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccc---cccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQD---VGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKS 241 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~---~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~ 241 (528)
++....+++|+.+ .+.+|++...... .......... ..+.. |+.++| ++. +|+++ .++.|++||+.
T Consensus 46 s~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~-----~~lp~-V~~l~f--d~~-~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 46 SNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWE-----KEIPD-VIFVCF--HGD-QVLVS-TRNALYSLDLE 114 (388)
T ss_dssp ETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEE-----EECTT-EEEEEE--ETT-EEEEE-ESSEEEEEESS
T ss_pred cCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEE-----eeCCC-eeEEEE--CCC-EEEEE-cCCcEEEEEch
Confidence 5677788888887 5556987652100 0000110000 11455 999999 777 88888 88999999997
Q ss_pred CCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccC
Q 009715 242 KDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYY 321 (528)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 321 (528)
... .......|...+.++.+.+. .+++++.||.|.+||+.+++... +.
T Consensus 115 sl~--------------------------~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~ 162 (388)
T 1xip_A 115 ELS--------------------------EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LA 162 (388)
T ss_dssp STT--------------------------CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EE
T ss_pred hhh--------------------------ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----cc
Confidence 521 12233445567778877754 38889999999999999887653 34
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE--EEEe------e---cCCCCeEEEEEec
Q 009715 322 GALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKV--VAWG------E---GHNSWVSGVAFDS 373 (528)
Q Consensus 322 ~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~--~~~~------~---~h~~~V~~v~f~p 373 (528)
..|.|++|||+| ++.|..||.+++|+.+.++. ...+ . +|...|.+|.|.+
T Consensus 163 ~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~ 223 (388)
T 1xip_A 163 QNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILS 223 (388)
T ss_dssp ESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESS
T ss_pred CCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEec
Confidence 579999999999 67899999999999887775 5555 2 4788999999998
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.28 E-value=3e-10 Score=123.82 Aligned_cols=188 Identities=12% Similarity=0.129 Sum_probs=122.5
Q ss_pred CCCCCeEEEEecC-C----cEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCce-----
Q 009715 165 AKDGHDLLIGLNS-G----DVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGN----- 234 (528)
Q Consensus 165 ~~~~~~l~~g~~~-G----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~----- 234 (528)
+|||+.|+.+..+ | +|++||+.+.. .... . .+...+..++|+|| + .|+.+..|+.
T Consensus 171 SPDG~~la~~~~~~G~e~~~i~v~dl~tg~-----~~~~--~------~~~~~~~~~~wspD-~-~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 171 SDDGRLLAYSVQDGGSDWRTVKFVGVADGK-----PLAD--E------LKWVKFSGLAWLGN-D-ALLYSRFAEPKEGQA 235 (741)
T ss_dssp CTTSSEEEEEEEETTCSEEEEEEEETTTCC-----EEEE--E------EEEEESCCCEESTT-S-EEEEEECCCC-----
T ss_pred CCCCCEEEEEEcCCCCceEEEEEEECCCCC-----CCCc--c------CCCceeccEEEECC-C-EEEEEEecCcccccc
Confidence 8999999887764 3 59999998621 1110 0 02223467899999 8 6766665543
Q ss_pred ---------EEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEee--cCCCeEEEEECCCCCEEEEEeCCC--
Q 009715 235 ---------LYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHI--CQGSINSIAFSTDGTYLATVGRDG-- 301 (528)
Q Consensus 235 ---------v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~spdg~~l~s~~~dg-- 301 (528)
|++|++.++.. .....+.. +...+..+.|+|||++|+..+.++
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~------------------------~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 291 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQS------------------------ADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTD 291 (741)
T ss_dssp ---CCCCCEEEEEETTSCGG------------------------GCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTC
T ss_pred cccCCCCCEEEEEECCCCch------------------------hCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCC
Confidence 88888764211 01111221 223578999999999998887554
Q ss_pred ---cEEEEecCCc--eEEeeecccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCC--eEEEEeecCCCCeEEEE
Q 009715 302 ---YLRVFDYSKE--QLICGGKSYYGALLCCAWSMDGKYILTGGED----DLVQVWSMEDR--KVVAWGEGHNSWVSGVA 370 (528)
Q Consensus 302 ---~i~vwd~~~~--~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~d----g~v~vwd~~~~--~~~~~~~~h~~~V~~v~ 370 (528)
.|++||+.++ +....+..+...+... ++|+|+.|+..+.+ +.|.+||+.++ +....+..+...+..+.
T Consensus 292 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~ 370 (741)
T 1yr2_A 292 PVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVG 370 (741)
T ss_dssp SCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEE
T ss_pred CcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEE
Confidence 8999999876 3133344444445544 35899988877653 45999999874 33444444555566777
Q ss_pred EecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc
Q 009715 371 FDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 406 (528)
Q Consensus 371 f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~ 406 (528)
|. ++ .++++...|+..+||.+.
T Consensus 371 ~~--------~~------~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 371 IA--------GN------RLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EE--------BT------EEEEEEEETTEEEEEEEE
T ss_pred EE--------CC------EEEEEEEECCEEEEEEEe
Confidence 76 33 588899999988888664
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.28 E-value=9.2e-09 Score=102.20 Aligned_cols=238 Identities=7% Similarity=-0.079 Sum_probs=145.3
Q ss_pred EEEEeeCCCcEEEEEe----------CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEE
Q 009715 215 SVTWVPGGDGAFVVGH----------ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINS 284 (528)
Q Consensus 215 ~l~~~p~g~~~l~tg~----------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 284 (528)
.++++|||+ .++++. .++.|.+||..+... ...++.... ..+. +......
T Consensus 70 ~i~~spDg~-~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~-~~~i~~~~~-----------------~~~~-~g~~p~~ 129 (373)
T 2mad_H 70 NPVAAHSGS-EFALASTSFSRIAKGKRTDYVEVFDPVTFLP-IADIELPDA-----------------PRFD-VGPYSWM 129 (373)
T ss_pred CeEECCCCC-EEEEEeccccccccCCCCCeEEEEECCCCcE-EEEEECCCc-----------------cccc-cCCCccc
Confidence 899999999 666664 367899999864211 111110000 0000 0123458
Q ss_pred EEECCCCCEEEEEeC--CCcEEEEecCCceEEee-ecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeEEEEee
Q 009715 285 IAFSTDGTYLATVGR--DGYLRVFDYSKEQLICG-GKSYYGALLCCAWSMDG-KYILTGGEDDLVQVWSMEDRKVVAWGE 360 (528)
Q Consensus 285 l~~spdg~~l~s~~~--dg~i~vwd~~~~~~~~~-~~~~~~~v~~l~~sp~g-~~l~sg~~dg~v~vwd~~~~~~~~~~~ 360 (528)
+.|+|||++|++++. +..|.++| ++++.+.. +.. .+ |+.+.|++ +.+++.+.||.+.++|. +++.+....
T Consensus 130 ~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~ 203 (373)
T 2mad_H 130 NANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGL 203 (373)
T ss_pred eEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEe
Confidence 999999999999874 47899999 99988777 542 22 24555655 35566778999999999 877663322
Q ss_pred -----cCCCC-eEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCe--EEEEeecCC-C----------CC
Q 009715 361 -----GHNSW-VSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDE--IVVPLRRGP-L----------GG 421 (528)
Q Consensus 361 -----~h~~~-V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~--~~~~~~~~~-~----------~~ 421 (528)
....+ .....|.+ ++. .+++. +.++.|.+.|+..+. .+..+.... . ..
T Consensus 204 ~~~~~~~~~p~~~~~~~~~-------~~~-----~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~ 270 (373)
T 2mad_H 204 VGAMLTAAQNLLTQPAQAN-------KSG-----RIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQ 270 (373)
T ss_pred ccccccCCcceeecceeEe-------cCC-----EEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceE
Confidence 11112 12345666 541 23333 367899999997653 222222110 0 11
Q ss_pred CCeecCCCCCccCCceeeeec----------CCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe---EEEEE-CCCeE
Q 009715 422 SPTFSTGSQSAHWDNVCPVGT----------LQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES---VLTVC-REGHI 487 (528)
Q Consensus 422 ~~~~s~~~~~~~~d~~~~~g~----------~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~---l~t~s-~Dg~i 487 (528)
.+.+++++. .+.+.. ..+.+.+.|..+.+.+..+... ....+++|+||+ ++++. .++.|
T Consensus 271 ~~~~s~d~~------~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V 343 (373)
T 2mad_H 271 QVAYLKSSD------GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVL 343 (373)
T ss_pred eEEECCCCC------EEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeE
Confidence 134444431 111111 2346888899999888888643 357899999983 66666 58999
Q ss_pred EEEeCCCCccc
Q 009715 488 KIWMRPGVAES 498 (528)
Q Consensus 488 ~iW~~~~~~~~ 498 (528)
.+||..+.+..
T Consensus 344 ~ViD~~t~~vv 354 (373)
T 2mad_H 344 HIYDAGAGDQD 354 (373)
T ss_pred EEEECCCCCEE
Confidence 99999887643
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.28 E-value=8.5e-09 Score=98.52 Aligned_cols=222 Identities=9% Similarity=0.009 Sum_probs=146.2
Q ss_pred CCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC
Q 009715 210 NSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST 289 (528)
Q Consensus 210 ~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 289 (528)
...+.++++.+++. ++++...++.|.+||.. +.. ..+. .......+.++++.+
T Consensus 61 ~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~--g~~-~~~~-----------------------~~~~~~~~~~i~~~~ 113 (300)
T 2qc5_A 61 DAKVMCLIVSSLGD-IWFTENGANKIGKLSKK--GGF-TEYP-----------------------LPQPDSGPYGITEGL 113 (300)
T ss_dssp TCCEEEEEECTTSC-EEEEETTTTEEEEECTT--SCE-EEEE-----------------------CSSTTCCEEEEEECS
T ss_pred CCcceeEEECCCCC-EEEEecCCCeEEEECCC--CCe-EEec-----------------------CCCCCCCCccceECC
Confidence 35688999999998 77766667889999865 211 0000 000125688999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCceEEee-ecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE-eecCCCCeE
Q 009715 290 DGTYLATVGRDGYLRVFDYSKEQLICG-GKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAW-GEGHNSWVS 367 (528)
Q Consensus 290 dg~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~-~~~h~~~V~ 367 (528)
+++++++...++.|..+|.. ++.... +......+..+++.++++++++...++.|..||. +++.... +..+...+.
T Consensus 114 ~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~ 191 (300)
T 2qc5_A 114 NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPV 191 (300)
T ss_dssp TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEE
T ss_pred CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcc
Confidence 99888777768899999988 655432 3323457889999999997777666789999998 5554332 223456789
Q ss_pred EEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCc
Q 009715 368 GVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAP 447 (528)
Q Consensus 368 ~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~ 447 (528)
++++++ +| .++++....+.|.+||. .++... +..
T Consensus 192 ~i~~d~-------~g------~l~v~~~~~~~i~~~~~-~g~~~~-~~~------------------------------- 225 (300)
T 2qc5_A 192 GITSGN-------DG------ALWFVEIMGNKIGRITT-TGEISE-YDI------------------------------- 225 (300)
T ss_dssp EEEECT-------TS------SEEEEETTTTEEEEECT-TCCEEE-EEC-------------------------------
T ss_pred eEEECC-------CC------CEEEEccCCCEEEEEcC-CCcEEE-EEC-------------------------------
Confidence 999998 88 46666666778999987 443221 110
Q ss_pred eeeecCCCCceEEeecCCCCeEEEEEeCCe-EEEEE-CCCeEEEEeCCCCcccc-CC-Cccce--EEEccCCceEEEee
Q 009715 448 SMRDVPKLSPLVAHRVHTEPLSGLIFTQES-VLTVC-REGHIKIWMRPGVAESQ-SS-SSETV--LSTSSKDKPLLSSK 520 (528)
Q Consensus 448 ~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-l~t~s-~Dg~i~iW~~~~~~~~~-~~-~~~~v--l~~spd~~~l~s~~ 520 (528)
..+...+.++++++++ |..+. .++.|..|+..+..... .. ....+ ++++++|+..++..
T Consensus 226 --------------~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 226 --------------PTPNARPHAITAGKNSEIWFTEWGANQIGRITNDNTIQEYQLQTENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp --------------SSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECCSTTCCCCCEEECTTSCEEEECS
T ss_pred --------------CCCCCCceEEEECCCCCEEEeccCCCeEEEECCCCcEEEEECCccCCccceeEeCCCCCEEEEcc
Confidence 0123457789998875 55444 56889999984332211 11 11222 88899998766554
No 205
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.27 E-value=1.1e-09 Score=105.66 Aligned_cols=155 Identities=10% Similarity=0.025 Sum_probs=107.7
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
.......|+|+++.++++...++.|..|+.. + .+..+..+...+..++++++
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~--g--------------------------~~~~~~~~~~~~~gl~~d~d 96 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED--G--------------------------TVDVLLDATAFTNGNAVDAQ 96 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETT--S--------------------------CEEEEEESCSCEEEEEECTT
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCC--C--------------------------CEEEEeCCCCccceeeECCC
Confidence 3567899999998677778888999999863 1 12333344567899999999
Q ss_pred CCEEEEEeCCCcEEEEecCCceEEeeeccc----CCCeEEEEEcCCCCEEEE----EeC-------------CCcEEEEE
Q 009715 291 GTYLATVGRDGYLRVFDYSKEQLICGGKSY----YGALLCCAWSMDGKYILT----GGE-------------DDLVQVWS 349 (528)
Q Consensus 291 g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----~~~v~~l~~sp~g~~l~s----g~~-------------dg~v~vwd 349 (528)
|+++++...++.|.+|+.+ ++........ ...+..++++|+|+++++ |.. .+.|..||
T Consensus 97 G~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d 175 (305)
T 3dr2_A 97 QRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLP 175 (305)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEEC
T ss_pred CCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEc
Confidence 9976666566789999986 5543222111 134678999999998886 332 25678888
Q ss_pred CCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC------CeEEEEEccCCe
Q 009715 350 MEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD------TRLLLWDLEMDE 409 (528)
Q Consensus 350 ~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D------~~i~lwd~~~~~ 409 (528)
.++++..... .....+.++|+| || ..|+.+... +.|.+||+..+.
T Consensus 176 ~~~g~~~~~~--~~~~p~gl~~sp-------dg------~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 176 PDGSPLQRMA--DLDHPNGLAFSP-------DE------QTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp SSSCCCEEEE--EESSEEEEEECT-------TS------SEEEEEECCC---CCCEEEEEEEETTE
T ss_pred CCCCcEEEEe--cCCCCcceEEcC-------CC------CEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 7666544333 345678999999 98 445554443 789999987654
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.26 E-value=3.3e-09 Score=102.41 Aligned_cols=192 Identities=11% Similarity=0.138 Sum_probs=126.9
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeee-cc-CCcccCCceeEEEEeeCCCcEEEEEeCC----------
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHY-NK-DGSVNNSRCTSVTWVPGGDGAFVVGHAD---------- 232 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~-~~-~~~~h~~~v~~l~~~p~g~~~l~tg~~d---------- 232 (528)
.+++..|+++...+.|.+||...+. ..+ .. ........+.+++++++|. ++++...+
T Consensus 79 ~~~~g~l~v~~~~~~l~~~d~~g~~----------~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~ 147 (314)
T 1pjx_A 79 DRDANQLFVADMRLGLLVVQTDGTF----------EEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRS 147 (314)
T ss_dssp CSSSSEEEEEETTTEEEEEETTSCE----------EECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBT
T ss_pred ecCCCcEEEEECCCCEEEEeCCCCE----------EEEEeccCCCccccCCcCEEECCCCC-EEEEecCccccccccccc
Confidence 4563456666655578888875211 001 00 0011334688999999998 66666554
Q ss_pred -----ceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEEC----CCCCEEEEE-eCCCc
Q 009715 233 -----GNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFS----TDGTYLATV-GRDGY 302 (528)
Q Consensus 233 -----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s----pdg~~l~s~-~~dg~ 302 (528)
+.|..|+.. +. +..+..+......++|+ |+++.|+.+ ..++.
T Consensus 148 ~~~~~~~l~~~~~~--g~--------------------------~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~ 199 (314)
T 1pjx_A 148 MQEKFGSIYCFTTD--GQ--------------------------MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKK 199 (314)
T ss_dssp TSSSCEEEEEECTT--SC--------------------------EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTE
T ss_pred ccCCCCeEEEECCC--CC--------------------------EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCe
Confidence 455555543 11 11111122456789999 999766555 46789
Q ss_pred EEEEecC-CceE-----EeeecccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCC
Q 009715 303 LRVFDYS-KEQL-----ICGGKSYY-GALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYW 375 (528)
Q Consensus 303 i~vwd~~-~~~~-----~~~~~~~~-~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~ 375 (528)
|.+||++ +++. ...+..+. ..+..++++++|+++++...++.|.+||.++++.+..+..+...+.+++|+|
T Consensus 200 i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~-- 277 (314)
T 1pjx_A 200 LWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKP-- 277 (314)
T ss_dssp EEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECT--
T ss_pred EEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECC--
Confidence 9999986 4542 22333333 5678899999999888887889999999987777666766778899999999
Q ss_pred CCCCCCCCccceeEEEEEEeCCCeEEEEEccC
Q 009715 376 SQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 376 ~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~ 407 (528)
||+ .++++...++.|..||+..
T Consensus 278 -----dg~-----~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 278 -----QTK-----TIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp -----TSS-----EEEEEETTTTEEEEEECSS
T ss_pred -----CCC-----EEEEEeCCCCeEEEEeCCC
Confidence 882 2555666778999999864
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.24 E-value=2.2e-08 Score=95.65 Aligned_cols=187 Identities=9% Similarity=-0.026 Sum_probs=125.1
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
.++++.+++...++.|..||...+. . .+... .....+.++++.++|. ++++...++.|..|+.. +
T Consensus 70 ~~~g~l~v~~~~~~~v~~~d~~g~~-------~---~~~~~--~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~--g 134 (300)
T 2qc5_A 70 SSLGDIWFTENGANKIGKLSKKGGF-------T---EYPLP--QPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD--G 134 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTTSCE-------E---EEECS--STTCCEEEEEECSTTC-EEEEETTTTEEEEECTT--S
T ss_pred CCCCCEEEEecCCCeEEEECCCCCe-------E---EecCC--CCCCCCccceECCCCC-EEEEccCCCeEEEECCC--C
Confidence 4566655555557788888865311 0 11111 0235688999999998 77777668889999865 2
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEee-ecccCCC
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICG-GKSYYGA 323 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~ 323 (528)
... .+. .......+.++++.++++++++...++.|..+|. +++.... .......
T Consensus 135 ~~~-~~~-----------------------~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~ 189 (300)
T 2qc5_A 135 TIY-EYD-----------------------LPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAA 189 (300)
T ss_dssp CEE-EEE-----------------------CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCC
T ss_pred CEE-Ecc-----------------------CCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCC
Confidence 110 000 0011356889999999996666666788999998 5554432 2233456
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE-eecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEE
Q 009715 324 LLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAW-GEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLL 402 (528)
Q Consensus 324 v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~-~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~l 402 (528)
+..+++.++|.++++....+.|.+||. +++.... +..+...+.++++++ +| .++++...++.|..
T Consensus 190 ~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~-------~g------~l~v~~~~~~~i~~ 255 (300)
T 2qc5_A 190 PVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGK-------NS------EIWFTEWGANQIGR 255 (300)
T ss_dssp EEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECS-------TT------CEEEEETTTTEEEE
T ss_pred cceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECC-------CC------CEEEeccCCCeEEE
Confidence 889999999987777766778999998 4544332 334556789999999 88 56666666789999
Q ss_pred EEc
Q 009715 403 WDL 405 (528)
Q Consensus 403 wd~ 405 (528)
||.
T Consensus 256 ~~~ 258 (300)
T 2qc5_A 256 ITN 258 (300)
T ss_dssp ECT
T ss_pred ECC
Confidence 997
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.24 E-value=4.8e-09 Score=100.86 Aligned_cols=225 Identities=10% Similarity=0.085 Sum_probs=137.4
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG 291 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg 291 (528)
--.+..|+|++..++++...++.|+.||..... ...+. ....+.+++++++|
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~---------------------------~~~~~-~~~~~~~i~~~~dG 65 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ---------------------------VQRVT-MDAPVSSVALRQSG 65 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---------------------------EEEEE-CSSCEEEEEEBTTS
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCc---------------------------EEEEe-CCCceEEEEECCCC
Confidence 456889999766577788888999999987421 11111 23678899999999
Q ss_pred CEEEEEeCCCcEEEEecCCceEEeeeccc----CCCeEEEEEcCCCCEEEEEeCC---------CcEEEEECCC-CeEEE
Q 009715 292 TYLATVGRDGYLRVFDYSKEQLICGGKSY----YGALLCCAWSMDGKYILTGGED---------DLVQVWSMED-RKVVA 357 (528)
Q Consensus 292 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----~~~v~~l~~sp~g~~l~sg~~d---------g~v~vwd~~~-~~~~~ 357 (528)
++++. . +..|.+||.++++........ ...++.++++|+|+++++...+ ..-.||.+.. ++...
T Consensus 66 ~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~ 143 (297)
T 3g4e_A 66 GYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK 143 (297)
T ss_dssp SEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE
T ss_pred CEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE
Confidence 95554 4 567999999887754332211 2347889999999977654322 2334555443 33322
Q ss_pred EeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEc--cCCeEEEEeecCCCCCCCeecCCCCCccCC
Q 009715 358 WGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDL--EMDEIVVPLRRGPLGGSPTFSTGSQSAHWD 435 (528)
Q Consensus 358 ~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~--~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d 435 (528)
+..+....+.++|+| ||+ .++++.+.++.|.+||+ .++..... +
T Consensus 144 -~~~~~~~pngi~~sp-------dg~-----~lyv~~~~~~~i~~~~~d~~~G~~~~~-~-------------------- 189 (297)
T 3g4e_A 144 -YFDQVDISNGLDWSL-------DHK-----IFYYIDSLSYSVDAFDYDLQTGQISNR-R-------------------- 189 (297)
T ss_dssp -EEEEESBEEEEEECT-------TSC-----EEEEEEGGGTEEEEEEECTTTCCEEEE-E--------------------
T ss_pred -EeeccccccceEEcC-------CCC-----EEEEecCCCCcEEEEeccCCCCcccCc-E--------------------
Confidence 333445678999999 882 34566677899999997 44442110 0
Q ss_pred ceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe-EEEE-ECCCeEEEEeCCCCccc-cC-CCccce--EEE
Q 009715 436 NVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES-VLTV-CREGHIKIWMRPGVAES-QS-SSSETV--LST 509 (528)
Q Consensus 436 ~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-l~t~-s~Dg~i~iW~~~~~~~~-~~-~~~~~v--l~~ 509 (528)
.+..+..+......+++++++ |..+ ..++.|.+||..+++.. .. .....+ ++|
T Consensus 190 ---------------------~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f 248 (297)
T 3g4e_A 190 ---------------------SVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCF 248 (297)
T ss_dssp ---------------------EEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEE
T ss_pred ---------------------EEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEE
Confidence 000111122345677888765 4433 45567888887744421 11 111222 777
Q ss_pred c-cCCceEEEeee
Q 009715 510 S-SKDKPLLSSKV 521 (528)
Q Consensus 510 s-pd~~~l~s~~~ 521 (528)
+ ||++.|..++.
T Consensus 249 ~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 249 GGKNYSEMYVTCA 261 (297)
T ss_dssp ESGGGCEEEEEEB
T ss_pred eCCCCCEEEEEcC
Confidence 6 78877765544
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.24 E-value=4.1e-09 Score=101.31 Aligned_cols=194 Identities=11% Similarity=0.101 Sum_probs=120.5
Q ss_pred CeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCC
Q 009715 169 HDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDS 248 (528)
Q Consensus 169 ~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~ 248 (528)
..+++...++.|+.||..... . .... ....+.+++++++|+ ++++ . +..|.+||..+.. . .
T Consensus 26 ~l~~~d~~~~~i~~~d~~~~~-----~--~~~~-------~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~d~~~g~-~-~ 86 (297)
T 3g4e_A 26 SLLFVDIPAKKVCRWDSFTKQ-----V--QRVT-------MDAPVSSVALRQSGG-YVAT-I-GTKFCALNWKEQS-A-V 86 (297)
T ss_dssp EEEEEETTTTEEEEEETTTCC-----E--EEEE-------CSSCEEEEEEBTTSS-EEEE-E-TTEEEEEETTTTE-E-E
T ss_pred EEEEEECCCCEEEEEECCCCc-----E--EEEe-------CCCceEEEEECCCCC-EEEE-E-CCeEEEEECCCCc-E-E
Confidence 344445556789999987521 0 0111 345789999999998 5554 3 5689999986421 0 0
Q ss_pred ccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCC---------CcEEEEecCC-ceEEeeec
Q 009715 249 SFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRD---------GYLRVFDYSK-EQLICGGK 318 (528)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~d---------g~i~vwd~~~-~~~~~~~~ 318 (528)
.+.... ... ....++.++++|+|+++++...+ ....+|.+.. ++... +.
T Consensus 87 ~~~~~~-------------~~~-------~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~ 145 (297)
T 3g4e_A 87 VLATVD-------------NDK-------KNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YF 145 (297)
T ss_dssp EEEECC-------------TTC-------SSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EE
T ss_pred EEEecC-------------CCC-------CCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-Ee
Confidence 000000 000 01357889999999966654321 2234554442 33332 22
Q ss_pred ccCCCeEEEEEcCCCCEEE-EEeCCCcEEEEEC--CCCeE-----EEEeecCCCCeEEEEEecCCCCCCCCCCccceeEE
Q 009715 319 SYYGALLCCAWSMDGKYIL-TGGEDDLVQVWSM--EDRKV-----VAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYR 390 (528)
Q Consensus 319 ~~~~~v~~l~~sp~g~~l~-sg~~dg~v~vwd~--~~~~~-----~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~ 390 (528)
......+.++|+||++.|+ +...++.|.+||+ .++.. +..+..+...+..+++++ +| ++
T Consensus 146 ~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-------~G------~l 212 (297)
T 3g4e_A 146 DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-------EG------KL 212 (297)
T ss_dssp EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-------TS------CE
T ss_pred eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-------CC------CE
Confidence 2334567899999998765 4555788999997 44432 233333456788999999 88 67
Q ss_pred EEEEeCCCeEEEEEccCCeEEEEee
Q 009715 391 FGSVGQDTRLLLWDLEMDEIVVPLR 415 (528)
Q Consensus 391 l~s~s~D~~i~lwd~~~~~~~~~~~ 415 (528)
.++...++.|..||..+++.+..+.
T Consensus 213 wva~~~~~~v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 213 WVACYNGGRVIRLDPVTGKRLQTVK 237 (297)
T ss_dssp EEEEETTTEEEEECTTTCCEEEEEE
T ss_pred EEEEcCCCEEEEEcCCCceEEEEEE
Confidence 7777778899999998887765554
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.23 E-value=2.2e-08 Score=99.50 Aligned_cols=214 Identities=10% Similarity=-0.052 Sum_probs=131.2
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEEecCCceEEeeeccc-------CCCeEEEEEcCCCCEEEEEeC--CCc
Q 009715 284 SIAFSTDGTYLATVG----------RDGYLRVFDYSKEQLICGGKSY-------YGALLCCAWSMDGKYILTGGE--DDL 344 (528)
Q Consensus 284 ~l~~spdg~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~-------~~~v~~l~~sp~g~~l~sg~~--dg~ 344 (528)
.++|+|||++|+++. .++.|.+||..+.+.+..+..- ......++|+|||++|++++. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999999986 3678999999988877655321 123457899999999998874 478
Q ss_pred EEEEECCCCeEEEE-eecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC------
Q 009715 345 VQVWSMEDRKVVAW-GEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG------ 417 (528)
Q Consensus 345 v~vwd~~~~~~~~~-~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~------ 417 (528)
|.++| .+++.+.. +. ... ++.+.| +++ ..+++.+.|+++.++|. +++........
T Consensus 150 v~viD-~t~~~~~~~i~-~~~---~~~~~~-------~~~-----~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~ 211 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLS-SPT---CYHIHP-------GAP-----STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAA 211 (373)
T ss_pred EEEEE-CCCCEEeEEcC-CCc---eEEEEe-------CCC-----ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCC
Confidence 99999 99988877 54 222 244555 542 35677788999999999 87766433210
Q ss_pred CC-CCCCeecCCCCCccCCceeeeecCCCCceeeecCCCC--ceEEeec----------CCCCeEEEEEeCCe--EEEEE
Q 009715 418 PL-GGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLS--PLVAHRV----------HTEPLSGLIFTQES--VLTVC 482 (528)
Q Consensus 418 ~~-~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~--~~~~~~~----------h~~~V~~l~~s~d~--l~t~s 482 (528)
.+ .....+..++ ..+..-...+.+.+.|+.... .+..+.. .......++++||+ |+.+.
T Consensus 212 ~p~~~~~~~~~~~------~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~ 285 (373)
T 2mad_H 212 QNLLTQPAQANKS------GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLT 285 (373)
T ss_pred cceeecceeEecC------CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEe
Confidence 00 0111222221 111111123345555553321 1111111 11224447788874 44443
Q ss_pred C----------CCeEEEEeCCCCcccc---CCCccceEEEccCCc-eEEEeee
Q 009715 483 R----------EGHIKIWMRPGVAESQ---SSSSETVLSTSSKDK-PLLSSKV 521 (528)
Q Consensus 483 ~----------Dg~i~iW~~~~~~~~~---~~~~~~vl~~spd~~-~l~s~~~ 521 (528)
. ++.|.+.|..+.+... .+....-++|+|||+ .|++++.
T Consensus 286 ~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~ 338 (373)
T 2mad_H 286 SEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSA 338 (373)
T ss_pred ccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcC
Confidence 2 3579999998876422 233344499999999 6777663
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.17 E-value=1.1e-08 Score=102.97 Aligned_cols=156 Identities=8% Similarity=0.020 Sum_probs=108.9
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
.....|+|++++. ++++...++.|++||.... .+..+........ ++|+++
T Consensus 131 ~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g---------------------------~~~~~~~~~~~~~-ia~~~~ 181 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAYQRDDPRVRLISVDDN---------------------------KVTTVHPGFKGGK-PAVTKD 181 (409)
T ss_dssp CCEEEEEECSTTE-EEEEETTTTEEEEEETTTT---------------------------EEEEEEETCCBCB-CEECTT
T ss_pred CCceEEEEeCCCC-EEEEecCCCcEEEEECCCC---------------------------EEEEeeccCCCCc-eeEecC
Confidence 4678999999998 8888888899999998742 1111211123334 999999
Q ss_pred CCEEEEEeCCC--cEEEEecCCceEEeee----cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE----ee
Q 009715 291 GTYLATVGRDG--YLRVFDYSKEQLICGG----KSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAW----GE 360 (528)
Q Consensus 291 g~~l~s~~~dg--~i~vwd~~~~~~~~~~----~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~----~~ 360 (528)
++.|+++..++ .|.+|+...+.....+ ......+.+++++|+...|+++..++.|+.||..++..... ..
T Consensus 182 g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~ 261 (409)
T 3hrp_A 182 KQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELS 261 (409)
T ss_dssp SSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCC
T ss_pred CCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEeccccc
Confidence 99999988766 7888888755433222 21445678899999544555577788999999987754322 22
Q ss_pred cCCCCe--EEEEEecCCCCCCCC-CCccceeEEEEEEeCCCeEEEEEccCC
Q 009715 361 GHNSWV--SGVAFDSYWSQPNSD-GTAETVMYRFGSVGQDTRLLLWDLEMD 408 (528)
Q Consensus 361 ~h~~~V--~~v~f~p~~~~~~~d-g~~~~~~~~l~s~s~D~~i~lwd~~~~ 408 (528)
++...- ..++|+| + + .++++...+++|+.||....
T Consensus 262 g~~~~~P~~~ia~~p-------~~g------~lyv~d~~~~~I~~~~~~g~ 299 (409)
T 3hrp_A 262 GSLGTNPGPYLIYYF-------VDS------NFYMSDQNLSSVYKITPDGE 299 (409)
T ss_dssp SCCCCSSCCEEEEET-------TTT------EEEEEETTTTEEEEECTTCC
T ss_pred CCCCCCccccEEEeC-------CCC------EEEEEeCCCCEEEEEecCCC
Confidence 232222 3999999 5 5 67778788899999997654
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.16 E-value=8.4e-09 Score=101.63 Aligned_cols=260 Identities=12% Similarity=0.013 Sum_probs=156.3
Q ss_pred EEEeeCCCcEEEEEeC-----CceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 216 VTWVPGGDGAFVVGHA-----DGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 216 l~~~p~g~~~l~tg~~-----dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
....|+++ .+++... ++.|.++|..+. +.+..+.....+ . ++++||
T Consensus 38 ~~~~pd~~-~vyV~~~~~~~~~~~V~ViD~~t~--------------------------~v~~~I~vG~~P-~-va~spD 88 (386)
T 3sjl_D 38 EAPAPDAR-RVYVNDPAHFAAVTQQFVIDGEAG--------------------------RVIGMIDGGFLP-N-PVVADD 88 (386)
T ss_dssp CCCCCCTT-EEEEEECGGGCSSEEEEEEETTTT--------------------------EEEEEEEECSSC-E-EEECTT
T ss_pred eccCCCCC-EEEEEcCcccCCCCEEEEEECCCC--------------------------eEEEEEECCCCC-c-EEECCC
Confidence 45578998 5666554 689999998752 233344433344 4 999999
Q ss_pred CCEEEEEe----------CCCcEEEEecCCceEEeeecccC-------CCeEEEEEcCCCCEEEEEeC--CCcEEEEECC
Q 009715 291 GTYLATVG----------RDGYLRVFDYSKEQLICGGKSYY-------GALLCCAWSMDGKYILTGGE--DDLVQVWSME 351 (528)
Q Consensus 291 g~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~~-------~~v~~l~~sp~g~~l~sg~~--dg~v~vwd~~ 351 (528)
|++|++++ .++.|.+||..+.+.+..+.... .....++++|||++++++.. ++.|.++|+.
T Consensus 89 G~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~ 168 (386)
T 3sjl_D 89 GSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE 168 (386)
T ss_dssp SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred CCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC
Confidence 99888875 36789999999999887764221 24567999999999998874 6899999999
Q ss_pred CCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC-CeEEEEeecC-CCCCCCeecCCC
Q 009715 352 DRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM-DEIVVPLRRG-PLGGSPTFSTGS 429 (528)
Q Consensus 352 ~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~~-~~~~~~~~s~~~ 429 (528)
+++.+.++.-- + + ...+ | .|. ..+++.+.||++.+.++.. ++........ .......|....
T Consensus 169 t~~vv~tI~v~-g-~-~~~~-P-------~g~-----~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~ 232 (386)
T 3sjl_D 169 GKAFKRMLDVP-D-C-YHIF-P-------TAP-----DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPA 232 (386)
T ss_dssp TTEEEEEEECC-S-E-EEEE-E-------EET-----TEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCE
T ss_pred CCcEEEEEECC-C-c-ceee-c-------CCC-----ceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccce
Confidence 99999888632 1 1 1222 4 221 3567888899999999976 5543221110 111111111000
Q ss_pred CCccCCceeeeecCCCCceeeecCCCCc--eEEee----------cCCCCeEEEEEeCCe--EEEEEC----------CC
Q 009715 430 QSAHWDNVCPVGTLQPAPSMRDVPKLSP--LVAHR----------VHTEPLSGLIFTQES--VLTVCR----------EG 485 (528)
Q Consensus 430 ~~~~~d~~~~~g~~~~~~~~~d~~~~~~--~~~~~----------~h~~~V~~l~~s~d~--l~t~s~----------Dg 485 (528)
....+..+..-+..+.+.+.|...... +..+. ...+....++++++. |+..-. ..
T Consensus 233 -~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~ 311 (386)
T 3sjl_D 233 -YSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR 311 (386)
T ss_dssp -EETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred -eEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCC
Confidence 000122222333355666666644321 11111 011233357778863 444322 25
Q ss_pred eEEEEeCCCCccccC---CCccceEEEccCCc-eEEEeee
Q 009715 486 HIKIWMRPGVAESQS---SSSETVLSTSSKDK-PLLSSKV 521 (528)
Q Consensus 486 ~i~iW~~~~~~~~~~---~~~~~vl~~spd~~-~l~s~~~ 521 (528)
.|.+.|+.+.+.... ++...-++++||++ +|++++.
T Consensus 312 ~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~ 351 (386)
T 3sjl_D 312 FVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST 351 (386)
T ss_dssp EEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEET
T ss_pred EEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcC
Confidence 788999988774433 22223499999997 6776553
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.14 E-value=3e-08 Score=96.62 Aligned_cols=222 Identities=13% Similarity=0.042 Sum_probs=135.9
Q ss_pred eeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCC
Q 009715 213 CTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGT 292 (528)
Q Consensus 213 v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~ 292 (528)
..+..|+|++..++++...++.|.+|+..... +..+. ....+.+++|+++|+
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~---------------------------~~~~~-~~~~v~~i~~~~dg~ 102 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGR---------------------------KTVHA-LPFMGSALAKISDSK 102 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTE---------------------------EEEEE-CSSCEEEEEEEETTE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCc---------------------------EEEEE-CCCcceEEEEeCCCe
Confidence 45789999866577777788999999986421 11121 135788999999998
Q ss_pred EEEEEeCCCcEEEEecCCceEEeeecc---c-CCCeEEEEEcCCCCEEEEEeC------CCcEEEEECCCCeEEEEeecC
Q 009715 293 YLATVGRDGYLRVFDYSKEQLICGGKS---Y-YGALLCCAWSMDGKYILTGGE------DDLVQVWSMEDRKVVAWGEGH 362 (528)
Q Consensus 293 ~l~s~~~dg~i~vwd~~~~~~~~~~~~---~-~~~v~~l~~sp~g~~l~sg~~------dg~v~vwd~~~~~~~~~~~~h 362 (528)
++++. .+ .|.+||.++++....... . ...+..++++|+|+++++... .+.|..++ +++... +..+
T Consensus 103 l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~ 177 (326)
T 2ghs_A 103 QLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFAD 177 (326)
T ss_dssp EEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEE
T ss_pred EEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCC
Confidence 77654 44 499999988775432221 1 235789999999997765542 24566666 454433 3234
Q ss_pred CCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc--CC-eEEEEeecCCCCCCCeecCCCCCccCCceee
Q 009715 363 NSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE--MD-EIVVPLRRGPLGGSPTFSTGSQSAHWDNVCP 439 (528)
Q Consensus 363 ~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~--~~-~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~ 439 (528)
......++|+| ||+ .++++.+.++.|.+||+. ++ +....
T Consensus 178 ~~~~~~i~~s~-------dg~-----~lyv~~~~~~~I~~~d~~~~~Gl~~~~~-------------------------- 219 (326)
T 2ghs_A 178 ISIPNSICFSP-------DGT-----TGYFVDTKVNRLMRVPLDARTGLPTGKA-------------------------- 219 (326)
T ss_dssp ESSEEEEEECT-------TSC-----EEEEEETTTCEEEEEEBCTTTCCBSSCC--------------------------
T ss_pred CcccCCeEEcC-------CCC-----EEEEEECCCCEEEEEEcccccCCcccCc--------------------------
Confidence 45678999999 882 244555667899999986 44 21000
Q ss_pred eecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe-EEEE-ECCCeEEEEeCCCCccccCC-Cccce--EEEc-cCC
Q 009715 440 VGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES-VLTV-CREGHIKIWMRPGVAESQSS-SSETV--LSTS-SKD 513 (528)
Q Consensus 440 ~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-l~t~-s~Dg~i~iW~~~~~~~~~~~-~~~~v--l~~s-pd~ 513 (528)
+.+..+.........+++++++ |..+ ..++.|.+|+..+....... ....+ ++|+ ||+
T Consensus 220 ----------------~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~ 283 (326)
T 2ghs_A 220 ----------------EVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDA 283 (326)
T ss_dssp ----------------EEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECSCSBEEEEEEESTTS
T ss_pred ----------------eEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECCCCCcEEEEEecCCC
Confidence 0000011112335678888875 4444 35678999988544322221 22223 7777 888
Q ss_pred ceEEEeee
Q 009715 514 KPLLSSKV 521 (528)
Q Consensus 514 ~~l~s~~~ 521 (528)
+.|..++.
T Consensus 284 ~~L~vt~~ 291 (326)
T 2ghs_A 284 SRLLVTSA 291 (326)
T ss_dssp CEEEEEEB
T ss_pred CEEEEEec
Confidence 87765543
No 214
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.13 E-value=1.2e-08 Score=102.17 Aligned_cols=248 Identities=10% Similarity=-0.006 Sum_probs=154.0
Q ss_pred EEEEeeCCCcEEEEEe----------CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeec------
Q 009715 215 SVTWVPGGDGAFVVGH----------ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHIC------ 278 (528)
Q Consensus 215 ~l~~~p~g~~~l~tg~----------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h------ 278 (528)
.++++|||+ +|+++. .++.|.++|..+.. .+..+...
T Consensus 122 gia~SpDgk-~lyVan~~~~~~~~G~~~~~VsviD~~t~~--------------------------vv~~I~v~g~~r~~ 174 (426)
T 3c75_H 122 HPVAAEDGS-FFAQASTVFERIARGKRTDYVEVFDPVTFL--------------------------PIADIELPDAPRFL 174 (426)
T ss_dssp EEEECTTSS-CEEEEEEEEEETTEEEEEEEEEEECTTTCC--------------------------EEEEEEETTCCCCC
T ss_pred ceEECCCCC-EEEEEeccccccccCCCCCEEEEEECCCCc--------------------------EEEEEECCCccccc
Confidence 799999999 555554 46789999987621 11121110
Q ss_pred -CCCeEEEEECCCCCEEEEEeC--CCcEEEEecCCceEEeeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCe
Q 009715 279 -QGSINSIAFSTDGTYLATVGR--DGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDG-KYILTGGEDDLVQVWSMEDRK 354 (528)
Q Consensus 279 -~~~v~~l~~spdg~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g-~~l~sg~~dg~v~vwd~~~~~ 354 (528)
......+.|+|||++|+++.. ++.|.+.|+.+.+.+..+.. .+ . ....|++ +.+++.+.||.+.+.++.+++
T Consensus 175 ~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v-~g-~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 175 VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV-PD-C--YHIFPASPTVFYMNCRDGSLARVDFADGE 250 (426)
T ss_dssp BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC-CS-E--EEEEEEETTEEEEEETTSSEEEEECCTTC
T ss_pred cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc-CC-c--eeeccCCCcEEEEEcCCCCEEEEECCCCc
Confidence 123457899999999999874 57899999999998887653 11 1 3344443 456667778888888886665
Q ss_pred EEEE----eecCCCCe-EEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEE--EEeecC----------
Q 009715 355 VVAW----GEGHNSWV-SGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIV--VPLRRG---------- 417 (528)
Q Consensus 355 ~~~~----~~~h~~~V-~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~--~~~~~~---------- 417 (528)
.... +.....++ ..+.|.+ ++ ..++.....+.|.+.|+...... ..+...
T Consensus 251 v~~~~~~~~~v~~~p~~~~~~~~~-------dg------~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 251 TKVTNTEVFHTEDELLINHPAFSL-------RS------GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWR 317 (426)
T ss_dssp CEEEECCCCSCTTSCBCSCCEECT-------TT------CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEE
T ss_pred EEEEeeeeeccCCCceeeEeeecC-------CC------CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccc
Confidence 4422 11111111 2346677 76 34555567889999998765432 111110
Q ss_pred -CCCCCCeecCCCCCccCCceeeeec----------CCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe---EEEEE-
Q 009715 418 -PLGGSPTFSTGSQSAHWDNVCPVGT----------LQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES---VLTVC- 482 (528)
Q Consensus 418 -~~~~~~~~s~~~~~~~~d~~~~~g~----------~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~---l~t~s- 482 (528)
.....+.+++++. .+.+.. ..+.+.+.|..+.+.+..+.... ....++|+||+ ++++.
T Consensus 318 p~g~~~va~s~dg~------rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~ 390 (426)
T 3c75_H 318 PGGWQQTAYHRQSD------RIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSA 390 (426)
T ss_dssp ECSSSCEEEEGGGT------EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEET
T ss_pred cCCceeeEEcCCCC------EEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcC
Confidence 1112245555442 111111 12458889999999988886433 47899999973 67776
Q ss_pred CCCeEEEEeCCCCccccC---CCccceEEEccCC
Q 009715 483 REGHIKIWMRPGVAESQS---SSSETVLSTSSKD 513 (528)
Q Consensus 483 ~Dg~i~iW~~~~~~~~~~---~~~~~vl~~spd~ 513 (528)
.++.|.++|..+.+.... ......+.++||.
T Consensus 391 ~s~~VsVID~~t~kvv~tI~~vG~~P~~i~~~~~ 424 (426)
T 3c75_H 391 GTQTLHIYDAATGEELRSVDQLGRGPQIITTHDM 424 (426)
T ss_dssp TTTEEEEEETTTCCEEEEECCCSSSCCEEECCCC
T ss_pred CCCeEEEEECCCCCEEEEecCCCCCCcEEEcCCC
Confidence 599999999998875422 1222336666653
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.12 E-value=9.2e-08 Score=93.16 Aligned_cols=188 Identities=9% Similarity=0.030 Sum_probs=115.1
Q ss_pred CeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCC
Q 009715 169 HDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDS 248 (528)
Q Consensus 169 ~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~ 248 (528)
..+++...++.|+.||..... . ..+. ....+.+++|+|+|. ++++ ..+ .|.+||...+. . .
T Consensus 62 ~l~~~d~~~~~i~~~d~~~~~------~---~~~~-----~~~~v~~i~~~~dg~-l~v~-~~~-gl~~~d~~~g~-~-~ 122 (326)
T 2ghs_A 62 TAWWFNILERELHELHLASGR------K---TVHA-----LPFMGSALAKISDSK-QLIA-SDD-GLFLRDTATGV-L-T 122 (326)
T ss_dssp EEEEEEGGGTEEEEEETTTTE------E---EEEE-----CSSCEEEEEEEETTE-EEEE-ETT-EEEEEETTTCC-E-E
T ss_pred EEEEEECCCCEEEEEECCCCc------E---EEEE-----CCCcceEEEEeCCCe-EEEE-ECC-CEEEEECCCCc-E-E
Confidence 344555566788889876521 0 0111 234689999999997 5554 444 48899976421 1 0
Q ss_pred ccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeC------CCcEEEEecCCceEEeeecccCC
Q 009715 249 SFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGR------DGYLRVFDYSKEQLICGGKSYYG 322 (528)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~ 322 (528)
.+..... . .....+++++++|+|+++++... .+.|..++ +++.... .....
T Consensus 123 ~~~~~~~-------------~-------~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~-~~~~~ 179 (326)
T 2ghs_A 123 LHAELES-------------D-------LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL-FADIS 179 (326)
T ss_dssp EEECSST-------------T-------CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE-EEEES
T ss_pred EEeeCCC-------------C-------CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe-eCCCc
Confidence 0000000 0 00135789999999987665542 24566666 4554332 22334
Q ss_pred CeEEEEEcCCCCEEEEE-eCCCcEEEEECC--CC-e-----EEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEE
Q 009715 323 ALLCCAWSMDGKYILTG-GEDDLVQVWSME--DR-K-----VVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGS 393 (528)
Q Consensus 323 ~v~~l~~sp~g~~l~sg-~~dg~v~vwd~~--~~-~-----~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s 393 (528)
....++|+||++.|+.+ ..++.|.+||++ ++ + .+..+......+..+++++ +| .++++
T Consensus 180 ~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-------~G------~lwva 246 (326)
T 2ghs_A 180 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-------EG------HIWNA 246 (326)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-------TS------CEEEE
T ss_pred ccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-------CC------CEEEE
Confidence 56789999999876555 457899999986 55 2 2233333445678899998 88 56666
Q ss_pred EeCCCeEEEEEccCCeEEE
Q 009715 394 VGQDTRLLLWDLEMDEIVV 412 (528)
Q Consensus 394 ~s~D~~i~lwd~~~~~~~~ 412 (528)
...++.|.+||. .++.+.
T Consensus 247 ~~~~~~v~~~d~-~g~~~~ 264 (326)
T 2ghs_A 247 RWGEGAVDRYDT-DGNHIA 264 (326)
T ss_dssp EETTTEEEEECT-TCCEEE
T ss_pred EeCCCEEEEECC-CCCEEE
Confidence 666788999997 455443
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.10 E-value=4.2e-08 Score=98.80 Aligned_cols=230 Identities=9% Similarity=0.040 Sum_probs=147.6
Q ss_pred CCCCcceeeeCCCccEEEEeCC-CcEEEEeCCCCCCC-------------CCCCCeEEEEecCC--cEEEEEcccccccc
Q 009715 129 SSTSMTNTNFDGKGTYIIFNVG-DAIFISDLNSQDKD-------------AKDGHDLLIGLNSG--DVYSVSLRQQLQDV 192 (528)
Q Consensus 129 s~~s~~~~~~~~~g~~~~~~~~-~~i~v~~~~~~~~~-------------~~~~~~l~~g~~~G--~v~iwd~~~~~~~~ 192 (528)
....+.-+.++++|++++.+.. +.++++|....... .++++.|+++..++ .|++|+......
T Consensus 129 ~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-- 206 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-- 206 (409)
T ss_dssp CCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTC--
T ss_pred ccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCCceEEEEEcCCCce--
Confidence 3456667778888887777764 46777877653222 56778888888766 788888764211
Q ss_pred ccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCe
Q 009715 193 GKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPI 272 (528)
Q Consensus 193 ~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (528)
......... .....+.+++++|++. .|+++..++.|+.||..... ...+....
T Consensus 207 ---~~~~g~~~~---~~~~~p~~iav~p~~g-~lyv~d~~~~I~~~d~~~~~--~~~~~~~~------------------ 259 (409)
T 3hrp_A 207 ---PTRIGQLGS---TFSGKIGAVALDETEE-WLYFVDSNKNFGRFNVKTQE--VTLIKQLE------------------ 259 (409)
T ss_dssp ---EEEEEECCT---TSCSCCCBCEECTTSS-EEEEECTTCEEEEEETTTCC--EEEEEECC------------------
T ss_pred ---eEEeeeccc---hhcCCcEEEEEeCCCC-eEEEEECCCcEEEEECCCCC--EEEEeccc------------------
Confidence 000000000 0335678899999544 45557778899999987421 10000000
Q ss_pred EEEeecCCC--eEEEEECCC-CCEEEEEeCCCcEEEEecCCceEEeeeccc---------------CCCeEEEEEcCCCC
Q 009715 273 ARWHICQGS--INSIAFSTD-GTYLATVGRDGYLRVFDYSKEQLICGGKSY---------------YGALLCCAWSMDGK 334 (528)
Q Consensus 273 ~~~~~h~~~--v~~l~~spd-g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---------------~~~v~~l~~sp~g~ 334 (528)
..++... ...++|+|+ +.++++-..++.|+.|+.... . ..+.++ ......++++|+|+
T Consensus 260 --~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ 335 (409)
T 3hrp_A 260 --LSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-C-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN 335 (409)
T ss_dssp --CCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-E-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred --ccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-E-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence 0001111 128999995 555556567788999998743 2 222222 23478899999999
Q ss_pred EEEEEe-CCCcEEEEECCCCeEEEEeecC---------------CCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCC
Q 009715 335 YILTGG-EDDLVQVWSMEDRKVVAWGEGH---------------NSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT 398 (528)
Q Consensus 335 ~l~sg~-~dg~v~vwd~~~~~~~~~~~~h---------------~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~ 398 (528)
++++-. .++.|+.|++.+++. ..+.++ -.....|++++ +| .++++-..++
T Consensus 336 lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~-------~g------~lyVad~~n~ 401 (409)
T 3hrp_A 336 FYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDG-------EG------GYWIAEAWGK 401 (409)
T ss_dssp EEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECS-------SS------EEEEEESTTC
T ss_pred EEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcC-------CC------CEEEEECCCC
Confidence 777777 789999999877764 334333 24688999999 88 7888888889
Q ss_pred eEEEEEc
Q 009715 399 RLLLWDL 405 (528)
Q Consensus 399 ~i~lwd~ 405 (528)
+|+.+++
T Consensus 402 ~Ir~i~~ 408 (409)
T 3hrp_A 402 AIRKYAV 408 (409)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9988775
No 217
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.08 E-value=2.7e-07 Score=91.61 Aligned_cols=291 Identities=13% Similarity=0.106 Sum_probs=170.6
Q ss_pred CCCccEEEEeCCCcEEEEeCCCCC---------CC-----CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeecc
Q 009715 139 DGKGTYIIFNVGDAIFISDLNSQD---------KD-----AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNK 204 (528)
Q Consensus 139 ~~~g~~~~~~~~~~i~v~~~~~~~---------~~-----~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~ 204 (528)
..++.+.+++..+.-.+|...... .. ..++..+++++.+|.|+.+|..+.. .. ..+..
T Consensus 60 ~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~-----~~---W~~~~ 131 (376)
T 3q7m_A 60 DRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGT-----VA---WQTKV 131 (376)
T ss_dssp CTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCC-----EE---EEEEC
T ss_pred cCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCC-----EE---EEEeC
Confidence 446778888865544444443321 11 3456788899999999999987521 11 01111
Q ss_pred CCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEE
Q 009715 205 DGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINS 284 (528)
Q Consensus 205 ~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 284 (528)
.......+ .. .++ .+++++.++.|..+|..++. ....+... .+.........+
T Consensus 132 ~~~~~~~p----~~-~~~--~v~v~~~~g~l~~~d~~tG~-~~W~~~~~----------------~~~~~~~~~~~~--- 184 (376)
T 3q7m_A 132 AGEALSRP----VV-SDG--LVLIHTSNGQLQALNEADGA-VKWTVNLD----------------MPSLSLRGESAP--- 184 (376)
T ss_dssp SSCCCSCC----EE-ETT--EEEEECTTSEEEEEETTTCC-EEEEEECC----------------C-----CCCCCC---
T ss_pred CCceEcCC----EE-ECC--EEEEEcCCCeEEEEECCCCc-EEEEEeCC----------------CCceeecCCCCc---
Confidence 11111112 11 233 68888999999999987632 11111100 000000000111
Q ss_pred EEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCC-------eEEEEEcC--CCCEEEEEeCCCcEEEEECCCCeE
Q 009715 285 IAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGA-------LLCCAWSM--DGKYILTGGEDDLVQVWSMEDRKV 355 (528)
Q Consensus 285 l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-------v~~l~~sp--~g~~l~sg~~dg~v~vwd~~~~~~ 355 (528)
.. ++..++.+..++.|..+|..+++.+......... +..+.-.| .+..++.++.++.+..+|.++++.
T Consensus 185 -~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~ 261 (376)
T 3q7m_A 185 -TT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQI 261 (376)
T ss_dssp -EE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCE
T ss_pred -EE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcE
Confidence 11 1456788888999999999999887665422100 00011111 245677888899999999999988
Q ss_pred EEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCC--CCCCCeecCCCCCcc
Q 009715 356 VAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGP--LGGSPTFSTGSQSAH 433 (528)
Q Consensus 356 ~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~ 433 (528)
+.... ......+... ++ .+..++.++.|..+|..+++.+....... ....+.+
T Consensus 262 ~w~~~--~~~~~~~~~~--------~~-------~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~-------- 316 (376)
T 3q7m_A 262 MWKRE--LGSVNDFIVD--------GN-------RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL-------- 316 (376)
T ss_dssp EEEEC--CCCEEEEEEE--------TT-------EEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--------
T ss_pred Eeecc--CCCCCCceEE--------CC-------EEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--------
Confidence 76654 2334445443 44 67777889999999999999887665211 1111221
Q ss_pred CCceeeeecCCCCceeeecCCCCceEEeecCCCCeE-EEEEeCCeEEEEECCCeEEEEeC
Q 009715 434 WDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLS-GLIFTQESVLTVCREGHIKIWMR 492 (528)
Q Consensus 434 ~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~-~l~~s~d~l~t~s~Dg~i~iW~~ 492 (528)
.+..+.+++.++.+..+|..+.+.+.........+. ......+.|+.++.||.|..|+.
T Consensus 317 ~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~~ 376 (376)
T 3q7m_A 317 YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR 376 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEEC
T ss_pred ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEeC
Confidence 234566677777788888888887776665333332 23344456888888888888863
No 218
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.07 E-value=4.8e-08 Score=105.05 Aligned_cols=302 Identities=11% Similarity=0.137 Sum_probs=172.9
Q ss_pred CCCccEEEEeCCCcEEEEeCCCCCCC---------------CCCCCeEEEEecCCcEEEEEccccccccccceeeeeee-
Q 009715 139 DGKGTYIIFNVGDAIFISDLNSQDKD---------------AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHY- 202 (528)
Q Consensus 139 ~~~g~~~~~~~~~~i~v~~~~~~~~~---------------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~- 202 (528)
..++.+.+++....-.+|.+...... ..++..+++++.+|.|+.+|..+. +.+=.....
T Consensus 77 ~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG-----~~~W~~~~~~ 151 (689)
T 1yiq_A 77 GPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTG-----QRAWSVDTRA 151 (689)
T ss_dssp CGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTC-----CEEEEEECCS
T ss_pred cCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCC-----CEeeeecCcC
Confidence 34688888887666666655432210 235678899999999999998762 111000000
Q ss_pred ccC--CcccCCceeEEEEeeCCCcEEEEEe------CCceEEEEEcCCCCCCCCcccccc-ccc-eeE-----EeccCCC
Q 009715 203 NKD--GSVNNSRCTSVTWVPGGDGAFVVGH------ADGNLYVYEKSKDGAGDSSFPVIK-DQT-QFS-----VAHPRYS 267 (528)
Q Consensus 203 ~~~--~~~h~~~v~~l~~~p~g~~~l~tg~------~dg~v~vwd~~~~~~~~~~~~~~~-~~~-~~~-----~~~~~~~ 267 (528)
... ......++ + .++. ++++. .+|.|+.||..++. ..-.+.... ... .+. .......
T Consensus 152 ~~~~~~~~~~sP~----v-~~g~--v~vg~~~~~~~~~g~v~a~D~~tG~-~~W~~~~~~~~p~~~~~~~~~~~~~~~~~ 223 (689)
T 1yiq_A 152 DHKRSYTITGAPR----V-VNGK--VVIGNGGAEFGVRGYVTAYDAETGK-EAWRFYTVPGDPKLPPEGKGMEIAAKTWF 223 (689)
T ss_dssp CTTSCCBCCSCCE----E-ETTE--EEECCBCTTTCCBCEEEEEETTTCC-EEEEEESSCCCTTSCCCSHHHHHHHTTCC
T ss_pred CCCCCccccCCcE----E-ECCE--EEEEeCCCccCCCCEEEEEECCCCc-EEEEecccCCCcccccccccccccccccC
Confidence 000 01111121 1 2443 44443 37899999988733 222211100 000 000 0000000
Q ss_pred CCCCeEEEe---ecCCCeEEEEECCCCCEEEEEeCCCc-------------------EEEEecCCceEEeeecc--cC--
Q 009715 268 KSNPIARWH---ICQGSINSIAFSTDGTYLATVGRDGY-------------------LRVFDYSKEQLICGGKS--YY-- 321 (528)
Q Consensus 268 ~~~~~~~~~---~h~~~v~~l~~spdg~~l~s~~~dg~-------------------i~vwd~~~~~~~~~~~~--~~-- 321 (528)
. ..|. .+......++++|+..+|+.+..++. |..+|.++|+.+..+.. |.
T Consensus 224 g----~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~w 299 (689)
T 1yiq_A 224 G----DAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAW 299 (689)
T ss_dssp S----STHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCS
T ss_pred C----ceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccc
Confidence 0 0000 11122236788998889999887764 99999999999877653 21
Q ss_pred -----CCeEEEEEcCCCC---EEEEEeCCCcEEEEECCCCeEEEEeec-CCCCeE-------------------------
Q 009715 322 -----GALLCCAWSMDGK---YILTGGEDDLVQVWSMEDRKVVAWGEG-HNSWVS------------------------- 367 (528)
Q Consensus 322 -----~~v~~l~~sp~g~---~l~sg~~dg~v~vwd~~~~~~~~~~~~-h~~~V~------------------------- 367 (528)
..+.......+|+ .++.++.+|.++++|.++++++....- ...+..
T Consensus 300 d~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~ 379 (689)
T 1yiq_A 300 DYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRN 379 (689)
T ss_dssp CCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCE
T ss_pred cccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCee
Confidence 1222223333665 788999999999999999998754321 111111
Q ss_pred -------------EEEEecCCCCCCCCCCccceeEEEEEEe---------------------------------------
Q 009715 368 -------------GVAFDSYWSQPNSDGTAETVMYRFGSVG--------------------------------------- 395 (528)
Q Consensus 368 -------------~v~f~p~~~~~~~dg~~~~~~~~l~s~s--------------------------------------- 395 (528)
.++|+| +. .+++...
T Consensus 380 ~~~p~~~Gg~~w~~~a~dp-------~~------~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~ 446 (689)
T 1yiq_A 380 LVTPAFWGAHDWQPMSYNP-------DT------GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGL 446 (689)
T ss_dssp EESSCTTCSSCSSCCEEET-------TT------TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHH
T ss_pred EeCCCcccccCCCcceECC-------CC------CEEEEeccccceeeeeccccccccccccccccCccccccCcccccC
Confidence 256666 43 1333321
Q ss_pred ------CCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCC-e
Q 009715 396 ------QDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEP-L 468 (528)
Q Consensus 396 ------~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~-V 468 (528)
.++.|..||+.+++.+..+....+.....++.. ...+..++.++.++.||..+++.+..+....+. .
T Consensus 447 ~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~ta------gglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~ 520 (689)
T 1yiq_A 447 LEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTA------GNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMA 520 (689)
T ss_dssp HHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEET------TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred CCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceEC------CCEEEEECCCCcEEEEECCCCccceeeeCCCCccc
Confidence 147899999999999998876544333333332 246677888999999999999999888754332 2
Q ss_pred EEEEEeCC
Q 009715 469 SGLIFTQE 476 (528)
Q Consensus 469 ~~l~~s~d 476 (528)
.-+.|..+
T Consensus 521 ~p~ty~~~ 528 (689)
T 1yiq_A 521 APVTYSVD 528 (689)
T ss_dssp CCEEEEET
T ss_pred CceEEEEC
Confidence 34666665
No 219
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.05 E-value=1.1e-07 Score=94.47 Aligned_cols=248 Identities=11% Similarity=0.037 Sum_probs=151.0
Q ss_pred EEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEE
Q 009715 225 AFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLR 304 (528)
Q Consensus 225 ~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~ 304 (528)
.+++++.++.|..+|..++. ....+ ............ .+..+++++.++.|.
T Consensus 105 ~v~v~~~~g~l~a~d~~tG~-~~W~~-------------------------~~~~~~~~~p~~--~~~~v~v~~~~g~l~ 156 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSDGT-VAWQT-------------------------KVAGEALSRPVV--SDGLVLIHTSNGQLQ 156 (376)
T ss_dssp EEEEEETTSEEEEEETTTCC-EEEEE-------------------------ECSSCCCSCCEE--ETTEEEEECTTSEEE
T ss_pred EEEEEcCCCEEEEEECCCCC-EEEEE-------------------------eCCCceEcCCEE--ECCEEEEEcCCCeEE
Confidence 68888899999999987632 11111 000000001111 245788888999999
Q ss_pred EEecCCceEEeeecccCCCe-----EEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCC----------e-EE
Q 009715 305 VFDYSKEQLICGGKSYYGAL-----LCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSW----------V-SG 368 (528)
Q Consensus 305 vwd~~~~~~~~~~~~~~~~v-----~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~----------V-~~ 368 (528)
.+|.++++.+.......... ...... +..++.+..++.|..+|.++++.+......... + ..
T Consensus 157 ~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
T 3q7m_A 157 ALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTT 234 (376)
T ss_dssp EEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCC
T ss_pred EEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCC
Confidence 99999999887665322111 111222 346778888999999999999887766522110 1 01
Q ss_pred EEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCce
Q 009715 369 VAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPS 448 (528)
Q Consensus 369 v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~ 448 (528)
.... ++ .+..++.++.|..+|.++++.+....... ... ....+..+.++..++.+.
T Consensus 235 p~~~--------~~-------~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~--------~~~~~~~l~~~~~~g~l~ 290 (376)
T 3q7m_A 235 PVVV--------NG-------VVFALAYNGNLTALDLRSGQIMWKRELGS-VND--------FIVDGNRIYLVDQNDRVM 290 (376)
T ss_dssp CEEE--------TT-------EEEEECTTSCEEEEETTTCCEEEEECCCC-EEE--------EEEETTEEEEEETTCCEE
T ss_pred cEEE--------CC-------EEEEEecCcEEEEEECCCCcEEeeccCCC-CCC--------ceEECCEEEEEcCCCeEE
Confidence 1111 44 57777889999999999999887665321 111 111234556667778888
Q ss_pred eeecCCCCceEEee-cCCCCeEEEEEeCCeEEEEECCCeEEEEeCCCCccccCCC--ccce-EEEccCCceEEEeeeecc
Q 009715 449 MRDVPKLSPLVAHR-VHTEPLSGLIFTQESVLTVCREGHIKIWMRPGVAESQSSS--SETV-LSTSSKDKPLLSSKVVTS 524 (528)
Q Consensus 449 ~~d~~~~~~~~~~~-~h~~~V~~l~~s~d~l~t~s~Dg~i~iW~~~~~~~~~~~~--~~~v-l~~spd~~~l~s~~~~gs 524 (528)
.+|..+.+.+-... .....+.......+.|+.++.+|.|.++|..+++...... ...+ ......+..|+.++.+|.
T Consensus 291 ~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~ 370 (376)
T 3q7m_A 291 ALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGT 370 (376)
T ss_dssp EEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSC
T ss_pred EEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCE
Confidence 99988888776554 2233344455556679999999999999988876433211 1222 111123456666776666
Q ss_pred cc
Q 009715 525 SY 526 (528)
Q Consensus 525 ~~ 526 (528)
+|
T Consensus 371 l~ 372 (376)
T 3q7m_A 371 VY 372 (376)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 220
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.04 E-value=3e-08 Score=96.29 Aligned_cols=216 Identities=15% Similarity=0.097 Sum_probs=141.4
Q ss_pred EEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEE
Q 009715 225 AFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLR 304 (528)
Q Consensus 225 ~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~ 304 (528)
.+.+++.++.|..+|.. +.. ......+...+.++...+++. |..++.++.|.
T Consensus 109 ~l~v~t~~~~l~~~d~~--g~~-------------------------~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~ 160 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD--GTE-------------------------KWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLY 160 (330)
T ss_dssp EEEEECTTSEEEEECTT--SCE-------------------------EEEEECSSCCCSCCEECTTSC-EEEECTTSEEE
T ss_pred EEEEEecCCEEEEEcCC--CCE-------------------------EEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEE
Confidence 58888889999999876 211 111111223345566666776 66677889999
Q ss_pred EEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCc
Q 009715 305 VFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTA 384 (528)
Q Consensus 305 vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~ 384 (528)
.+|.. ++.+..+......+.++...+++.+++ ++ +.|..|| .+++.+.........+.++..++ +|
T Consensus 161 ~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~-------~g-- 226 (330)
T 3hxj_A 161 AINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISE-------DG-- 226 (330)
T ss_dssp EECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECT-------TS--
T ss_pred EECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECC-------CC--
Confidence 99999 877766655555677777877887544 44 7899999 77777766665566788888887 77
Q ss_pred cceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCC-CCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeec
Q 009715 385 ETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPL-GGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRV 463 (528)
Q Consensus 385 ~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~ 463 (528)
.|..++.++.|..+|. +++.+..+..... ...+.+.. +..+-+++.++.+..+|. ..+.+..+..
T Consensus 227 -----~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~-------~g~l~v~t~~ggl~~~d~-~g~~~~~~~~ 292 (330)
T 3hxj_A 227 -----TIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGN-------TDTIYFGSYDGHLYAINP-DGTEKWNFET 292 (330)
T ss_dssp -----CEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECT-------TSCEEEECTTCEEEEECT-TSCEEEEEEC
T ss_pred -----eEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcC-------CCeEEEecCCCCEEEECC-CCcEEEEEEc
Confidence 4666777888888884 5555555543222 12222221 234556666666777774 5555655555
Q ss_pred CCCCeEEEEEeCCe-EEEEECCCeEEEEeCCCCc
Q 009715 464 HTEPLSGLIFTQES-VLTVCREGHIKIWMRPGVA 496 (528)
Q Consensus 464 h~~~V~~l~~s~d~-l~t~s~Dg~i~iW~~~~~~ 496 (528)
....+.++...+++ |..++.+|.+++...+..+
T Consensus 293 ~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 293 GSWIIATPVIDENGTIYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp SSCCCSCCEECTTCCEEEECTTSCEEEEEC----
T ss_pred CCccccceEEcCCCEEEEEcCCCeEEEEeccccc
Confidence 55667777776664 8889999999988876544
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.04 E-value=1.9e-08 Score=108.71 Aligned_cols=239 Identities=10% Similarity=0.031 Sum_probs=143.7
Q ss_pred cCCceeEEEEeeCCCcEEEE-Ee----CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeE
Q 009715 209 NNSRCTSVTWVPGGDGAFVV-GH----ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSIN 283 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~t-g~----~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 283 (528)
|...+..++|+|||+ +||- .+ .+..|++||+.++... . ...+.....
T Consensus 127 ~~~~l~~~~~SpDg~-~lAy~~~~~G~~~~~i~v~dl~tg~~~--------------------------~-~~~~~~k~~ 178 (693)
T 3iuj_A 127 GTTALDQLSFSRDGR-ILAYSLSLAGSDWREIHLMDVESKQPL--------------------------E-TPLKDVKFS 178 (693)
T ss_dssp SCCEEEEEEECTTSS-EEEEEEECSSCCEEEEEEEETTTCSEE--------------------------E-EEEEEEESC
T ss_pred CcEEEEEEEECCCCC-EEEEEEecCCCceEEEEEEECCCCCCC--------------------------c-cccCCceec
Confidence 455788999999999 5653 32 3357999999863210 0 000001124
Q ss_pred EEEECCCCCEEEEEeCCC-------------cEEEEecCCce----EEeeecc-cCCCeEEEEEcCCCCEEEEEeC----
Q 009715 284 SIAFSTDGTYLATVGRDG-------------YLRVFDYSKEQ----LICGGKS-YYGALLCCAWSMDGKYILTGGE---- 341 (528)
Q Consensus 284 ~l~~spdg~~l~s~~~dg-------------~i~vwd~~~~~----~~~~~~~-~~~~v~~l~~sp~g~~l~sg~~---- 341 (528)
.++|+ |++.|+.+..+. .|++|++.+.+ ++..... |...+..+.|+|||++|+....
T Consensus 179 ~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 257 (693)
T 3iuj_A 179 GISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTS 257 (693)
T ss_dssp CCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSS
T ss_pred cEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCC
Confidence 67899 999999998774 39999997653 4444444 5556788999999998865432
Q ss_pred CCcEEEEECCCCe-EEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC---CeEEEEEccCCeE--EEEee
Q 009715 342 DDLVQVWSMEDRK-VVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD---TRLLLWDLEMDEI--VVPLR 415 (528)
Q Consensus 342 dg~v~vwd~~~~~-~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D---~~i~lwd~~~~~~--~~~~~ 415 (528)
+..|+++|+.++. ....+..+....... |++ +|. .+++....| ..|..+|+.++.. ...+.
T Consensus 258 ~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~-------~g~-----~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~ 324 (693)
T 3iuj_A 258 GNRLYVKDLSQENAPLLTVQGDLDADVSL-VDN-------KGS-----TLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI 324 (693)
T ss_dssp CCEEEEEETTSTTCCCEEEECSSSSCEEE-EEE-------ETT-----EEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred CcEEEEEECCCCCCceEEEeCCCCceEEE-Eec-------cCC-----EEEEEECCCCCCCEEEEEeCCCCCccccEEEe
Confidence 3589999998763 345555566666655 555 542 455555444 6899999987654 12333
Q ss_pred cCCCCCCCeecCCCCCccCCceeeeecCCC--CceeeecCCCCceEEee-cCCCCeEEEEEeCCe--EEEEECC----Ce
Q 009715 416 RGPLGGSPTFSTGSQSAHWDNVCPVGTLQP--APSMRDVPKLSPLVAHR-VHTEPLSGLIFTQES--VLTVCRE----GH 486 (528)
Q Consensus 416 ~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~--~~~~~d~~~~~~~~~~~-~h~~~V~~l~~s~d~--l~t~s~D----g~ 486 (528)
...... +.+++++. ..+.....++ .+.++++... ....+. .+...+..+.++++. |+....+ +.
T Consensus 325 ~~~~~~-~~~s~~g~-----~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~ 397 (693)
T 3iuj_A 325 PERQQV-LTVHSGSG-----YLFAEYMVDATARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPT 397 (693)
T ss_dssp CCCSSC-EEEEEETT-----EEEEEEEETTEEEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCE
T ss_pred cCCCCE-EEEEEECC-----EEEEEEEECCeeEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCE
Confidence 222211 25555542 1122222222 4566666533 333333 234557777777763 4433333 78
Q ss_pred EEEEeCCCCc
Q 009715 487 IKIWMRPGVA 496 (528)
Q Consensus 487 i~iW~~~~~~ 496 (528)
|..||+.++.
T Consensus 398 l~~~d~~~g~ 407 (693)
T 3iuj_A 398 LYRFEPKSGA 407 (693)
T ss_dssp EEEECTTTCC
T ss_pred EEEEECCCCe
Confidence 9999987654
No 222
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.03 E-value=1.6e-08 Score=101.32 Aligned_cols=252 Identities=14% Similarity=0.046 Sum_probs=149.5
Q ss_pred eCCCcEEEEEeCC----ceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEE
Q 009715 220 PGGDGAFVVGHAD----GNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLA 295 (528)
Q Consensus 220 p~g~~~l~tg~~d----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~ 295 (528)
++++.++++...+ +.|.++|..+. +.+..+.....+ .++++||+++|+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~--------------------------~vv~~I~vG~~P--gia~SpDgk~ly 133 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG--------------------------RILGMTDGGFLP--HPVAAEDGSFFA 133 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT--------------------------EEEEEEEECSSC--EEEECTTSSCEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC--------------------------EEEEEEECCCCC--ceEECCCCCEEE
Confidence 4566344444433 79999998762 233333333344 899999999888
Q ss_pred EEe----------CCCcEEEEecCCceEEeeeccc-------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeEE
Q 009715 296 TVG----------RDGYLRVFDYSKEQLICGGKSY-------YGALLCCAWSMDGKYILTGGE--DDLVQVWSMEDRKVV 356 (528)
Q Consensus 296 s~~----------~dg~i~vwd~~~~~~~~~~~~~-------~~~v~~l~~sp~g~~l~sg~~--dg~v~vwd~~~~~~~ 356 (528)
++. .++.|.++|..+.+.+..+.-- ......+.++|||++++++.. ++.|.++|+.+++.+
T Consensus 134 Van~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 134 QASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp EEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred EEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEE
Confidence 876 3678999999999888766421 123457899999999999874 578999999999998
Q ss_pred EEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEee----cC--CCCCCCeecCCCC
Q 009715 357 AWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLR----RG--PLGGSPTFSTGSQ 430 (528)
Q Consensus 357 ~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~----~~--~~~~~~~~s~~~~ 430 (528)
..+.-- . . ....| +|+ ..+++.+.|+++.+.|+..++...... .. +....+.+.+++.
T Consensus 214 ~~I~v~-g-~--~~~~p-------~g~-----~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~ 277 (426)
T 3c75_H 214 RMLDVP-D-C--YHIFP-------ASP-----TVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG 277 (426)
T ss_dssp EEEECC-S-E--EEEEE-------EET-----TEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC
T ss_pred EEEEcC-C-c--eeecc-------CCC-----cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC
Confidence 887631 1 1 23344 432 356677788888888886665543211 10 0011122333331
Q ss_pred CccCCceeeeecCCCCceeeecCCCCce--EEeec----------CCCCeEEEEEeCCe--EEEE-E---------CCCe
Q 009715 431 SAHWDNVCPVGTLQPAPSMRDVPKLSPL--VAHRV----------HTEPLSGLIFTQES--VLTV-C---------REGH 486 (528)
Q Consensus 431 ~~~~d~~~~~g~~~~~~~~~d~~~~~~~--~~~~~----------h~~~V~~l~~s~d~--l~t~-s---------~Dg~ 486 (528)
.+..-...+.+.+.|....... ..+.. .......++++|++ ++.. . .++.
T Consensus 278 ------~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~ 351 (426)
T 3c75_H 278 ------RLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRF 351 (426)
T ss_dssp ------EEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEE
T ss_pred ------EEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCE
Confidence 1111122334444554322110 00000 01111236889873 4433 2 1357
Q ss_pred EEEEeCCCCccccC---CCccceEEEccCCc-eEEEeee
Q 009715 487 IKIWMRPGVAESQS---SSSETVLSTSSKDK-PLLSSKV 521 (528)
Q Consensus 487 i~iW~~~~~~~~~~---~~~~~vl~~spd~~-~l~s~~~ 521 (528)
|.+.|..+.+.... +....-++|+|||+ +|++.+.
T Consensus 352 VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~ 390 (426)
T 3c75_H 352 VVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSA 390 (426)
T ss_dssp EEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEET
T ss_pred EEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcC
Confidence 99999988774433 22233399999999 8888774
No 223
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.01 E-value=1.8e-07 Score=100.40 Aligned_cols=325 Identities=13% Similarity=0.104 Sum_probs=188.2
Q ss_pred eCCCccEEEEeCCCcEEEEeCCCCCCC---------------CCCCCeEEEEecCCcEEEEEccccccccccceeeeeee
Q 009715 138 FDGKGTYIIFNVGDAIFISDLNSQDKD---------------AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHY 202 (528)
Q Consensus 138 ~~~~g~~~~~~~~~~i~v~~~~~~~~~---------------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~ 202 (528)
...++.+.+++....-.+|..+..... ..++..|++++.+|.|+.+|..+. +.+=. ...
T Consensus 83 ~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG-----~~~W~-~~~ 156 (677)
T 1kb0_A 83 SASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATG-----KEVWH-QNT 156 (677)
T ss_dssp ECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTC-----CEEEE-EET
T ss_pred ECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCC-----CEEee-ecC
Confidence 344688889988777777766644210 235778999999999999998762 11100 000
Q ss_pred ccCCcccCCceeEEEEeeCCCcEEEEEeC------CceEEEEEcCCCCCCCCccccccccc-eeEEeccCCCCCCCeEEE
Q 009715 203 NKDGSVNNSRCTSVTWVPGGDGAFVVGHA------DGNLYVYEKSKDGAGDSSFPVIKDQT-QFSVAHPRYSKSNPIARW 275 (528)
Q Consensus 203 ~~~~~~h~~~v~~l~~~p~g~~~l~tg~~------dg~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 275 (528)
..+. .....+..--...++ .++++.. +|.|+.||..++. ..-.+....... ....... .......|
T Consensus 157 ~~~~-~~~~~~~~~p~v~~~--~v~v~~~~~~~~~~g~v~a~D~~tG~-~~W~~~~~~~~~~~~~~~~~---~~~g~~~w 229 (677)
T 1kb0_A 157 FEGQ-KGSLTITGAPRVFKG--KVIIGNGGAEYGVRGYITAYDAETGE-RKWRWFSVPGDPSKPFEDES---MKRAARTW 229 (677)
T ss_dssp TTTC-CSSCBCCSCCEEETT--EEEECCBCTTTCCBCEEEEEETTTCC-EEEEEESSCCCTTSCCSSHH---HHHHHTTS
T ss_pred CcCc-CcCcccccCcEEECC--EEEEEecccccCCCCEEEEEECCCCc-EEEEeccCCCCccccccccc---cccccccc
Confidence 0000 000111111111234 4555543 7899999987632 221111110000 0000000 00000001
Q ss_pred e---------ecCCCeEEEEECCCCCEEEEEeCCC-------------------cEEEEecCCceEEeeecc--cC----
Q 009715 276 H---------ICQGSINSIAFSTDGTYLATVGRDG-------------------YLRVFDYSKEQLICGGKS--YY---- 321 (528)
Q Consensus 276 ~---------~h~~~v~~l~~spdg~~l~s~~~dg-------------------~i~vwd~~~~~~~~~~~~--~~---- 321 (528)
. ........++++|++..|+.+..++ .|..+|.++++.+..+.. |.
T Consensus 230 ~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~ 309 (677)
T 1kb0_A 230 DPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDY 309 (677)
T ss_dssp CGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC
T ss_pred cccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccc
Confidence 0 1122334678899888888887664 499999999998876543 21
Q ss_pred ---CCeEEEEEcCCC---CEEEEEeCCCcEEEEECCCCeEEEEeecCC-CCe----------------------------
Q 009715 322 ---GALLCCAWSMDG---KYILTGGEDDLVQVWSMEDRKVVAWGEGHN-SWV---------------------------- 366 (528)
Q Consensus 322 ---~~v~~l~~sp~g---~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~-~~V---------------------------- 366 (528)
.....+....+| +.++.++.+|.|+++|.++++.+..+.-.. .+.
T Consensus 310 ~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~ 389 (677)
T 1kb0_A 310 TSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGP 389 (677)
T ss_dssp CCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCT
T ss_pred ccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCc
Confidence 112223444477 678899999999999999999887654211 111
Q ss_pred ------EEEEEecCCCCCCCCCCccceeEEEEEEeC-------------------------------------------C
Q 009715 367 ------SGVAFDSYWSQPNSDGTAETVMYRFGSVGQ-------------------------------------------D 397 (528)
Q Consensus 367 ------~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~-------------------------------------------D 397 (528)
..++|+| ++ .+++.... .
T Consensus 390 ~G~~~w~~~a~dp-------~~------~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 456 (677)
T 1kb0_A 390 YGAHNWHPMSFNP-------QT------GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPF 456 (677)
T ss_dssp TCSSCSSCCEEET-------TT------TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCE
T ss_pred ccccCCCCceEcC-------CC------CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCc
Confidence 1456776 54 24444322 2
Q ss_pred CeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCC-CeEEEEEeCC
Q 009715 398 TRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTE-PLSGLIFTQE 476 (528)
Q Consensus 398 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~-~V~~l~~s~d 476 (528)
+.|..||+.+++.+..+....+.....++..+ ..+.+++.++.++.+|..+.+.+..+..... ...-+.|..+
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g------~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~ 530 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAG------NVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVD 530 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETT------TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCC------CEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeC
Confidence 78999999999999988765444444444333 4556678899999999999999988875432 2234555555
Q ss_pred e---EEEEEC----------------CCeEEEEeCCC
Q 009715 477 S---VLTVCR----------------EGHIKIWMRPG 494 (528)
Q Consensus 477 ~---l~t~s~----------------Dg~i~iW~~~~ 494 (528)
+ ++..+. .+.+.+|.++.
T Consensus 531 G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 531 GRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp TEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred CEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 3 333222 36778888764
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.01 E-value=3.4e-08 Score=95.23 Aligned_cols=193 Identities=10% Similarity=-0.005 Sum_probs=116.0
Q ss_pred CCCC-eEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 166 KDGH-DLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 166 ~~~~-~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
++++ .++++..++.|+.|+.... . ..+. .+...+..++++++|+ ++++...++.|.+|+.+ +
T Consensus 54 ~~g~~l~~~d~~~~~i~~~~~~g~-------~---~~~~----~~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~--g 116 (305)
T 3dr2_A 54 EAQRTLVWSDLVGRRVLGWREDGT-------V---DVLL----DATAFTNGNAVDAQQR-LVHCEHGRRAITRSDAD--G 116 (305)
T ss_dssp GGGTEEEEEETTTTEEEEEETTSC-------E---EEEE----ESCSCEEEEEECTTSC-EEEEETTTTEEEEECTT--S
T ss_pred CCCCEEEEEECCCCEEEEEeCCCC-------E---EEEe----CCCCccceeeECCCCC-EEEEECCCCEEEEECCC--C
Confidence 4444 3445555678888876321 0 0111 1345688999999998 67666667889999864 2
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEE----EeC-------------CCcEEEEe
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLAT----VGR-------------DGYLRVFD 307 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s----~~~-------------dg~i~vwd 307 (528)
.. ..+...... .....++.+++.++|+++++ +.. .+.|..+|
T Consensus 117 ~~-~~~~~~~~~--------------------~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d 175 (305)
T 3dr2_A 117 QA-HLLVGRYAG--------------------KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLP 175 (305)
T ss_dssp CE-EEEECEETT--------------------EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEEC
T ss_pred CE-EEEEeccCC--------------------CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEc
Confidence 11 011000000 00145678999999998876 332 24678888
Q ss_pred cCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCC------CcEEEEECCCCeEE--EEe-ecCCCCeEEEEEecCCCCC
Q 009715 308 YSKEQLICGGKSYYGALLCCAWSMDGKYILTGGED------DLVQVWSMEDRKVV--AWG-EGHNSWVSGVAFDSYWSQP 378 (528)
Q Consensus 308 ~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~d------g~v~vwd~~~~~~~--~~~-~~h~~~V~~v~f~p~~~~~ 378 (528)
..+++..... .......++|+||++.|+.+... +.|.+|++..+... ..+ .........+++++
T Consensus 176 ~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~----- 248 (305)
T 3dr2_A 176 PDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDR----- 248 (305)
T ss_dssp SSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECT-----
T ss_pred CCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECC-----
Confidence 7666544333 33456789999999988777665 68999998764311 111 11234456788888
Q ss_pred CCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEe
Q 009715 379 NSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPL 414 (528)
Q Consensus 379 ~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 414 (528)
+| + |..+..+ .|.+||. .++.+..+
T Consensus 249 --~G------~-lwv~~~~-gv~~~~~-~g~~~~~~ 273 (305)
T 3dr2_A 249 --GG------W-LWSSSGT-GVCVFDS-DGQLLGHI 273 (305)
T ss_dssp --TS------C-EEECCSS-EEEEECT-TSCEEEEE
T ss_pred --CC------C-EEEecCC-cEEEECC-CCCEEEEE
Confidence 88 4 4444444 4888887 34444333
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.98 E-value=2.5e-07 Score=99.54 Aligned_cols=310 Identities=11% Similarity=0.025 Sum_probs=171.4
Q ss_pred CCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCccc-C-Cce-eEEEEeeCCCcEEEEEeCCceEEEEEcCCC
Q 009715 167 DGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVN-N-SRC-TSVTWVPGGDGAFVVGHADGNLYVYEKSKD 243 (528)
Q Consensus 167 ~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h-~-~~v-~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~ 243 (528)
.+..|++++.++.|+.+|..+.... .............+ . ..+ ..+++ .+. .+++++.|+.|+.+|..++
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~----W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g-~v~v~~~dg~l~AlDa~TG 141 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLI----WKYDPQSDRHRAGEACCDAVNRGVAV--WKG-KVYVGVLDGRLEAIDAKTG 141 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEE----EEECCCCCGGGGGGCTTCSCCCCCEE--ETT-EEEEECTTSEEEEEETTTC
T ss_pred ECCEEEEEcCCCeEEEEECCCCcee----EEEcCCCCccccccccccCCCCccEE--ECC-EEEEEccCCEEEEEECCCC
Confidence 4667788888888888888652110 00000000000000 0 000 11222 234 6888999999999998763
Q ss_pred CCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC---CCCEEEEEe------CCCcEEEEecCCceEE
Q 009715 244 GAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST---DGTYLATVG------RDGYLRVFDYSKEQLI 314 (528)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp---dg~~l~s~~------~dg~i~vwd~~~~~~~ 314 (528)
. ..-.+....+ ......+..+| ++ .++++. .++.|+.||.++|+.+
T Consensus 142 ~-~~W~~~~~~~-----------------------~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 142 Q-RAWSVDTRAD-----------------------HKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp C-EEEEEECCSC-----------------------TTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred C-EeeeecCcCC-----------------------CCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 2 2111111000 00000111111 34 444443 3689999999999988
Q ss_pred eeecccC-------------------------------CCeEEEEEcCCCCEEEEEeCCCc-------------------
Q 009715 315 CGGKSYY-------------------------------GALLCCAWSMDGKYILTGGEDDL------------------- 344 (528)
Q Consensus 315 ~~~~~~~-------------------------------~~v~~l~~sp~g~~l~sg~~dg~------------------- 344 (528)
..+.... .....++++|+..+++.+..++.
T Consensus 197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~ 276 (689)
T 1yiq_A 197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS 276 (689)
T ss_dssp EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 7654210 01125788888888998887753
Q ss_pred EEEEECCCCeEEEEeec--CCC-------CeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEee
Q 009715 345 VQVWSMEDRKVVAWGEG--HNS-------WVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLR 415 (528)
Q Consensus 345 v~vwd~~~~~~~~~~~~--h~~-------~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 415 (528)
|..||.++++.+..++. |.. .+.-..... +|+ ....++.++.+|.++++|.++++.+....
T Consensus 277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~-------~G~---~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 346 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI-------DGK---PRKVLMQAPKNGFFYVIDRATGELLSAKG 346 (689)
T ss_dssp EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-------TTE---EEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc-------CCc---EEEEEEEECCCCeEEEEECCCCCEecccc
Confidence 99999999999887763 321 122222222 551 11378899999999999999999986544
Q ss_pred cCCCC----------------------------------------CCCeecCCCCCcc---CC-----------------
Q 009715 416 RGPLG----------------------------------------GSPTFSTGSQSAH---WD----------------- 435 (528)
Q Consensus 416 ~~~~~----------------------------------------~~~~~s~~~~~~~---~d----------------- 435 (528)
..+.. ..+++++...... .+
T Consensus 347 ~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~ 426 (689)
T 1yiq_A 347 IVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPF 426 (689)
T ss_dssp SSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSC
T ss_pred ccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccccccccc
Confidence 32100 0123333221000 00
Q ss_pred -ceeeeec------------------CCCCceeeecCCCCceEEeecCCCCeEEEEEeC--CeEEEEECCCeEEEEeCCC
Q 009715 436 -NVCPVGT------------------LQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQ--ESVLTVCREGHIKIWMRPG 494 (528)
Q Consensus 436 -~~~~~g~------------------~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~--d~l~t~s~Dg~i~iW~~~~ 494 (528)
....++. .++.+..||..+++.+-.+..+... ..-.+.. ..++.++.||.|+.||..+
T Consensus 427 ~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~-~~g~~~tagglvf~gt~dg~l~a~D~~t 505 (689)
T 1yiq_A 427 KSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIF-NGGTLSTAGNLVFEGSADGRVIAYAADT 505 (689)
T ss_dssp TTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSC-CCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCc-cCccceECCCEEEEECCCCcEEEEECCC
Confidence 0000000 1245778999998888777655432 2223333 3488889999999999998
Q ss_pred CccccCC-Cc----cceEEEccCCceEEEe
Q 009715 495 VAESQSS-SS----ETVLSTSSKDKPLLSS 519 (528)
Q Consensus 495 ~~~~~~~-~~----~~vl~~spd~~~l~s~ 519 (528)
+++.... .. ..-+.+..||+..++.
T Consensus 506 G~~lw~~~~~~~~~~~p~ty~~~G~qyv~~ 535 (689)
T 1yiq_A 506 GEKLWEQPAASGVMAAPVTYSVDGEQYVTF 535 (689)
T ss_dssp CCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CccceeeeCCCCcccCceEEEECCEEEEEE
Confidence 8754321 11 1227778999865543
No 226
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.96 E-value=6.8e-08 Score=99.21 Aligned_cols=227 Identities=11% Similarity=0.034 Sum_probs=144.5
Q ss_pred eCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeec-CCCeEEEEE-C-CCCCEEEE
Q 009715 220 PGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHIC-QGSINSIAF-S-TDGTYLAT 296 (528)
Q Consensus 220 p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~-s-pdg~~l~s 296 (528)
+||+.++++...+..|.+.|+.+.. ..+.+..- ...+..+++ + |+++++++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~--------------------------~~~ii~ip~g~~phg~~~~~~p~~~~v~~ 152 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMK--------------------------CDAILEIPNAKGIHGLRPQKWPRSNYVFC 152 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTE--------------------------EEEEEECSSCCSEEEEEECCSSBCSEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCce--------------------------EeeEEeCCCCCCCcceeeeecCCCcEEEE
Confidence 3888555555667789999998621 12212111 245778888 5 89999988
Q ss_pred Ee------------------CCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCC---------------
Q 009715 297 VG------------------RDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDD--------------- 343 (528)
Q Consensus 297 ~~------------------~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg--------------- 343 (528)
++ .++.+.+.|.++.+.+.++.--. ....++.+|+|+++++.+.+.
T Consensus 153 ~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d 231 (595)
T 1fwx_A 153 NGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMD 231 (595)
T ss_dssp EECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEE
T ss_pred ecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccc
Confidence 85 24579999999998888776322 445688999999999887553
Q ss_pred -----------------------cEEEEECCC--CeE-EEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC
Q 009715 344 -----------------------LVQVWSMED--RKV-VAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD 397 (528)
Q Consensus 344 -----------------------~v~vwd~~~--~~~-~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D 397 (528)
.|.|.|.++ ++. +..+. -.....++.++| ||+ +.++++..+
T Consensus 232 ~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sP-------DGk-----~v~V~~~~s 298 (595)
T 1fwx_A 232 HIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAP-------DKK-----HLCVAGKLS 298 (595)
T ss_dssp EEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE-EESSCCCEEECT-------TSS-----EEEEECTTS
T ss_pred eEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe-cCCCceEEEEcC-------CCC-----EEEEeCCCC
Confidence 366777776 444 44443 233567899999 994 566777788
Q ss_pred CeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe
Q 009715 398 TRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES 477 (528)
Q Consensus 398 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~ 477 (528)
.+|.++|+.+.+.. +... ++ +....+.... -......++|++++
T Consensus 299 ~~VsVid~~~~~~~--~~~~-------------------------l~--------~~~~v~~~v~-vG~gP~h~aF~~dG 342 (595)
T 1fwx_A 299 PTVTVLDVTRFDAV--FYEN-------------------------AD--------PRSAVVAEPE-LGLGPLHTAFDGRG 342 (595)
T ss_dssp SBEEEEEGGGHHHH--HHSC-------------------------CC--------GGGGEEECCB-CCSCEEEEEECTTS
T ss_pred CeEEEEECcccccc--cccc-------------------------cC--------cccceEEEcC-CCCCcceEEECCCC
Confidence 99999999864311 0000 00 0000001111 12346789999987
Q ss_pred --EEEEECCCeEEEEeCCCC----------ccc--cCCCcc-c-e-----EEEccCCceEEEeeee
Q 009715 478 --VLTVCREGHIKIWMRPGV----------AES--QSSSSE-T-V-----LSTSSKDKPLLSSKVV 522 (528)
Q Consensus 478 --l~t~s~Dg~i~iW~~~~~----------~~~--~~~~~~-~-v-----l~~spd~~~l~s~~~~ 522 (528)
.++.-.|+.|.+||+... +.. ...+-. + . ..++||||+|++.+..
T Consensus 343 ~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~ 408 (595)
T 1fwx_A 343 NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKF 408 (595)
T ss_dssp EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCC
Confidence 456679999999998651 111 111211 1 1 4558999999998764
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.94 E-value=9.9e-08 Score=93.65 Aligned_cols=242 Identities=10% Similarity=0.048 Sum_probs=139.6
Q ss_pred CceeEEEEeeCCCcEEEEEe--CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEEC
Q 009715 211 SRCTSVTWVPGGDGAFVVGH--ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFS 288 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~--~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 288 (528)
..+..++++|+|+ +|++.. .++.++||.+. .+. ...++.... .-..|-..+.+++|+
T Consensus 17 ~~p~~va~~~~g~-~~v~~~~~~~~~~~l~~~~-~g~-~~~~p~~~~------------------~~~~~~~~p~gv~~d 75 (343)
T 2qe8_A 17 LAPGNITLTPDGR-LFLSLHQFYQPEMQVAELT-QDG-LIPFPPQSG------------------NAIITFDTVLGIKSD 75 (343)
T ss_dssp SCEEEEEECTTSC-EEEEECGGGCCSCSEEEEE-TTE-EEESCCCCS------------------SCCCCCSCEEEEEEC
T ss_pred CCcceEEECCCCC-EEEEeCCCCCCceEEEEEC-CCC-eecCCCccc------------------CcccceeEeeEEEEc
Confidence 4688999999998 777754 23436666665 221 111111000 011234689999999
Q ss_pred CCCCEEEEEeC-----CCcEEEEecCCceEEeeecc------cCCCeEEEEEcCCCCEE-EEEe---CCCcEEEEECCCC
Q 009715 289 TDGTYLATVGR-----DGYLRVFDYSKEQLICGGKS------YYGALLCCAWSMDGKYI-LTGG---EDDLVQVWSMEDR 353 (528)
Q Consensus 289 pdg~~l~s~~~-----dg~i~vwd~~~~~~~~~~~~------~~~~v~~l~~sp~g~~l-~sg~---~dg~v~vwd~~~~ 353 (528)
++++++++-.. +..|.+||+.+++.+..+.. +...+..++++|++..+ ++-. .++.|.+||+.++
T Consensus 76 ~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 76 GNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTG 155 (343)
T ss_dssp SSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTC
T ss_pred CCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCC
Confidence 99876665433 57899999999987665532 12356889999865444 4544 5789999999988
Q ss_pred eEEEEeecCC-----------------------------CCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEE
Q 009715 354 KVVAWGEGHN-----------------------------SWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWD 404 (528)
Q Consensus 354 ~~~~~~~~h~-----------------------------~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd 404 (528)
+..+.+.+|. ..+..|+|+| || ..|+.+..++. ++|.
T Consensus 156 ~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-------dg------~~ly~~~~~~~-~l~~ 221 (343)
T 2qe8_A 156 LAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-------EN------EWLYLSPMHST-SMYR 221 (343)
T ss_dssp CEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT-------TS------CEEEEEESSCS-EEEE
T ss_pred CEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc-------CC------CEEEEEeCCCC-eEEE
Confidence 7766664431 1357788888 87 45655555442 3343
Q ss_pred ccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe--EEEEE
Q 009715 405 LEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES--VLTVC 482 (528)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~--l~t~s 482 (528)
+..... .. ..... . .+ ...+ ...++......+++++++ +++..
T Consensus 222 ~~~~~~----~~-~~~~~------~------------------~~-----~~~~-~~~g~~g~pdgia~d~~G~l~va~~ 266 (343)
T 2qe8_A 222 IKSADL----SN-LQLTD------A------------------EL-----GSKI-ERYSEKPICDGISIDKDHNIYVGDL 266 (343)
T ss_dssp EEHHHH----TC-TTCCH------H------------------HH-----HTTC-EEEEECCSCSCEEECTTCCEEEEEG
T ss_pred EEHHHh----cC-CCCCh------h------------------hh-----hcce-EecccCCCCceEEECCCCCEEEEcc
Confidence 321100 00 00000 0 00 0000 011223345678888875 55556
Q ss_pred CCCeEEEEeC-CCCccccCCC--c--cceEEEccCCceEEEeeee
Q 009715 483 REGHIKIWMR-PGVAESQSSS--S--ETVLSTSSKDKPLLSSKVV 522 (528)
Q Consensus 483 ~Dg~i~iW~~-~~~~~~~~~~--~--~~vl~~spd~~~l~s~~~~ 522 (528)
.++.|.+|+. .+........ . ..-+++.++++.+++....
T Consensus 267 ~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 267 AHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp GGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred CCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 7789999998 4332222111 1 1228888998877776544
No 228
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.94 E-value=8.4e-08 Score=103.59 Aligned_cols=225 Identities=17% Similarity=0.170 Sum_probs=133.2
Q ss_pred eeCCCccEEEEeC---C---CcEEEEeCCCCCCC--------------CCCCCeEEEEecCC-------------cEEEE
Q 009715 137 NFDGKGTYIIFNV---G---DAIFISDLNSQDKD--------------AKDGHDLLIGLNSG-------------DVYSV 183 (528)
Q Consensus 137 ~~~~~g~~~~~~~---~---~~i~v~~~~~~~~~--------------~~~~~~l~~g~~~G-------------~v~iw 183 (528)
.+++||++++|.. + ..++++|+..+... + |++.|+....+. +|++|
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~ 213 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFH 213 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEE
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEE
Confidence 3445666665533 1 13566666654321 6 888898888774 39999
Q ss_pred EccccccccccceeeeeeeccCCcc-cCCceeEEEEeeCCCcEEEEEeC---CceEEEEEcCCCCCCCCcccccccccee
Q 009715 184 SLRQQLQDVGKKLVGAHHYNKDGSV-NNSRCTSVTWVPGGDGAFVVGHA---DGNLYVYEKSKDGAGDSSFPVIKDQTQF 259 (528)
Q Consensus 184 d~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~p~g~~~l~tg~~---dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 259 (528)
++.+.... .. ..+. ... |...+..+.|+|+|+.++++... +..|+++|+.....
T Consensus 214 ~lgt~~~~--~~----~v~~--~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~-------------- 271 (693)
T 3iuj_A 214 RLGTAQED--DR----LVFG--AIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA-------------- 271 (693)
T ss_dssp ETTSCGGG--CE----EEES--CSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC--------------
T ss_pred ECCCCccc--ce----EEEe--cCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC--------------
Confidence 98752211 01 1111 111 33457789999999944444432 24899999875321
Q ss_pred EEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEe-CC---CcEEEEecCCceE--EeeecccCCCeEEEEEcCCC
Q 009715 260 SVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVG-RD---GYLRVFDYSKEQL--ICGGKSYYGALLCCAWSMDG 333 (528)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~-~d---g~i~vwd~~~~~~--~~~~~~~~~~v~~l~~sp~g 333 (528)
....+..+....... |++++..|+..+ .+ +.|.++|+.+++. ...+..|...+. .|++++
T Consensus 272 -----------~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g 337 (693)
T 3iuj_A 272 -----------PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGS 337 (693)
T ss_dssp -----------CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEET
T ss_pred -----------ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEEC
Confidence 122233333444444 666666665544 33 5799999987643 233445555565 899999
Q ss_pred CEEEEEeCCC---cEEEEECCCCeEEEEee-cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe---CCCeEEEEEcc
Q 009715 334 KYILTGGEDD---LVQVWSMEDRKVVAWGE-GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG---QDTRLLLWDLE 406 (528)
Q Consensus 334 ~~l~sg~~dg---~v~vwd~~~~~~~~~~~-~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s---~D~~i~lwd~~ 406 (528)
++|+....++ .|++||+..+. ...+. .....+..+.++| +++ .++++.+ .-++|..||+.
T Consensus 338 ~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~-------d~~-----~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 338 GYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKH-------DDP-----ALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp TEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCT-------TCS-----CEEEEEECSSSCCEEEEECTT
T ss_pred CEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCC-------CCC-----EEEEEecCCCCCCEEEEEECC
Confidence 9888766544 68999988554 33433 3455677777777 662 2333332 23789999998
Q ss_pred CCeEE
Q 009715 407 MDEIV 411 (528)
Q Consensus 407 ~~~~~ 411 (528)
+++..
T Consensus 405 ~g~~~ 409 (693)
T 3iuj_A 405 SGAIS 409 (693)
T ss_dssp TCCEE
T ss_pred CCeEE
Confidence 87643
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.93 E-value=1.1e-10 Score=116.22 Aligned_cols=195 Identities=13% Similarity=0.081 Sum_probs=101.4
Q ss_pred CCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCC
Q 009715 167 DGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAG 246 (528)
Q Consensus 167 ~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~ 246 (528)
++..+++++.+|.|+.||..+. +.. +... . ..+.+..+..++. ++++++.||.|+.||..++. .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG-----~~~-----W~~~---~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~-~ 71 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG-----SIK-----WTLK---E-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNE-G 71 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC-----CEE-----EEEE---C-CCSCCCC-----C-CEEECTTTCCEEEC-----C-C
T ss_pred eCCEEEEEcCCCEEEEEECCCC-----CEE-----EEec---C-CCceecceEcCCC-EEEEeCCCCEEEEEECCCCc-e
Confidence 6788999999999999998762 111 1110 1 2344445556776 78888899999999987532 2
Q ss_pred CCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEE
Q 009715 247 DSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLC 326 (528)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~ 326 (528)
........... + ...++ +. ++..|++++.|+.|+.||.++|+.+..+..+. .
T Consensus 72 ~w~~~~~~~~~--------------~-----~~sp~----~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~ 123 (369)
T 2hz6_A 72 LTKLPFTIPEL--------------V-----QASPC----RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----A 123 (369)
T ss_dssp SEECSCCHHHH--------------H-----TTCSC----C------CCCCEEEEEEEEECCC-----------------
T ss_pred eeeeeccCccc--------------c-----ccCce----Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----c
Confidence 11111000000 0 00111 11 34467778889999999999999987776543 2
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc
Q 009715 327 CAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 406 (528)
Q Consensus 327 l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~ 406 (528)
..++|++..+++++.|+.|+.||.++++.+..+..+. ....++.+. ...++ .++.++.|+.|..||.+
T Consensus 124 ~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~---~~~~~-------~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 124 DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDD---VDYKM-------SHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp ---------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCC---TTCCC-------CEEEEETSCEEEEECTT
T ss_pred ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCC---ccccc-------eEEEECCCCEEEEEECC
Confidence 3556788889999999999999999998766654221 111122210 00013 46678899999999999
Q ss_pred CCeEEEEeecC
Q 009715 407 MDEIVVPLRRG 417 (528)
Q Consensus 407 ~~~~~~~~~~~ 417 (528)
+++.+......
T Consensus 192 tG~~~W~~~~~ 202 (369)
T 2hz6_A 192 SGDVLWIQNYA 202 (369)
T ss_dssp TCCEEEEEECS
T ss_pred CCcEEEEecCC
Confidence 99998887643
No 230
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.92 E-value=2.1e-07 Score=92.44 Aligned_cols=245 Identities=9% Similarity=0.097 Sum_probs=147.3
Q ss_pred eEEEEe--eCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC
Q 009715 214 TSVTWV--PGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG 291 (528)
Q Consensus 214 ~~l~~~--p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg 291 (528)
.+..++ ++++.+++.+-.+++|+|+|+.++.........++...... +........+...|+|
T Consensus 85 ~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~---------------~~g~s~Ph~~~~~pdG 149 (462)
T 2ece_A 85 LCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKK---------------VSGYSRLHTVHCGPDA 149 (462)
T ss_dssp GSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHH---------------HHCEEEEEEEEECSSC
T ss_pred cccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhccc---------------ccCCCcccceeECCCe
Confidence 344557 88886677788889999999875322111111000000000 0000134467788999
Q ss_pred CEEEEEeCC------CcEEEEecCCceEEeeecccCC---CeEEEEEcCCCCEEEEEe-------------------CCC
Q 009715 292 TYLATVGRD------GYLRVFDYSKEQLICGGKSYYG---ALLCCAWSMDGKYILTGG-------------------EDD 343 (528)
Q Consensus 292 ~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~---~v~~l~~sp~g~~l~sg~-------------------~dg 343 (528)
+++++..+ +.|.++|.++.+.+..+..... .-..+.|+|+++.+++.. .+.
T Consensus 150 -i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d 228 (462)
T 2ece_A 150 -IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGN 228 (462)
T ss_dssp -EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCC
T ss_pred -EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCC
Confidence 77766555 7899999999999888763222 234588999999888885 368
Q ss_pred cEEEEECCCCeEEEEeecC--CCCeEEEEE--ecCCCCCCCCCCccceeEEEEEEe-----CCCeEEEEEccCCeEEEEe
Q 009715 344 LVQVWSMEDRKVVAWGEGH--NSWVSGVAF--DSYWSQPNSDGTAETVMYRFGSVG-----QDTRLLLWDLEMDEIVVPL 414 (528)
Q Consensus 344 ~v~vwd~~~~~~~~~~~~h--~~~V~~v~f--~p~~~~~~~dg~~~~~~~~l~s~s-----~D~~i~lwd~~~~~~~~~~ 414 (528)
.|.+||+.+++.+.++.-- ......+.| +| +|+ ..++++- .+++|.+|....++... .
T Consensus 229 ~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~P-------dg~-----~aYV~~e~~~~~Lss~V~v~~~d~g~~~~-~ 295 (462)
T 2ece_A 229 RIHFWDLRKRKRIHSLTLGEENRMALELRPLHDP-------TKL-----MGFINMVVSLKDLSSSIWLWFYEDGKWNA-E 295 (462)
T ss_dssp EEEEEETTTTEEEEEEESCTTEEEEEEEEECSST-------TCC-----EEEEEEEEETTTCCEEEEEEEEETTEEEE-E
T ss_pred EEEEEECCCCcEeeEEecCCCCCccceeEeeECC-------CCC-----EEEEEEeeeccCCCceEEEEEecCCceeE-E
Confidence 9999999999888887642 123456666 88 883 3445555 67899888876543211 1
Q ss_pred ecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEe-------ecCCCCeEEEEEeCCe--EE-EEECC
Q 009715 415 RRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAH-------RVHTEPLSGLIFTQES--VL-TVCRE 484 (528)
Q Consensus 415 ~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~-------~~h~~~V~~l~~s~d~--l~-t~s~D 484 (528)
.. .|++..+....+ .+-......|.+++|+ |. +.-..
T Consensus 296 ~v---------------------------------Idi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~ 342 (462)
T 2ece_A 296 KV---------------------------------IEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI 342 (462)
T ss_dssp EE---------------------------------EEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT
T ss_pred EE---------------------------------EeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC
Confidence 00 000000000000 0002346789999985 44 44467
Q ss_pred CeEEEEeCCCC-cc-----ccCC-C--------------ccceEEEccCCceEEEee
Q 009715 485 GHIKIWMRPGV-AE-----SQSS-S--------------SETVLSTSSKDKPLLSSK 520 (528)
Q Consensus 485 g~i~iW~~~~~-~~-----~~~~-~--------------~~~vl~~spd~~~l~s~~ 520 (528)
+.|.++|+... .. ...+ . ...-++++||||+|++++
T Consensus 343 d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 343 GEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 89999998522 11 1111 0 123399999999999887
No 231
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.90 E-value=3e-08 Score=96.29 Aligned_cols=206 Identities=12% Similarity=0.022 Sum_probs=130.3
Q ss_pred CCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEE
Q 009715 291 GTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 370 (528)
Q Consensus 291 g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~ 370 (528)
+..|..++.++.|..+|.. ++.+.........+.++...+++. +..++.++.|..||.+ ++.+..+......+.++.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 4567888888999999998 777666554555566677777776 5667778999999998 877776665566677778
Q ss_pred EecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC-CCCCCCeecCCCCCccCCceeeeecCCCCcee
Q 009715 371 FDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG-PLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSM 449 (528)
Q Consensus 371 f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~ 449 (528)
.++ +| . +..++ +.|..+| .+++.+..+... .....+.+..++ .+-+++.++.+..
T Consensus 184 ~d~-------~g------~-l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g-------~l~v~t~~~gl~~ 239 (330)
T 3hxj_A 184 IGK-------DG------T-IYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDG-------TIYVTSLDGHLYA 239 (330)
T ss_dssp ECT-------TC------C-EEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTS-------CEEEEETTTEEEE
T ss_pred EcC-------CC------E-EEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCC-------eEEEEcCCCeEEE
Confidence 876 77 3 44444 8899999 777766665532 223344443332 3445555555666
Q ss_pred eecCCCCceEEeecCCCCeEEEEEeCC-eEEEEECCCeEEEEeCCCCccccCCC-ccce--EEEccCCceEEEeeeeccc
Q 009715 450 RDVPKLSPLVAHRVHTEPLSGLIFTQE-SVLTVCREGHIKIWMRPGVAESQSSS-SETV--LSTSSKDKPLLSSKVVTSS 525 (528)
Q Consensus 450 ~d~~~~~~~~~~~~h~~~V~~l~~s~d-~l~t~s~Dg~i~iW~~~~~~~~~~~~-~~~v--l~~spd~~~l~s~~~~gs~ 525 (528)
++ +..+.+..+......+..+.+.++ .|..++.+|.|..+|..+........ ...+ +.+.++|+..+ ++.+|.+
T Consensus 240 ~~-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~~-gt~~G~~ 317 (330)
T 3hxj_A 240 IN-PDGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWNFETGSWIIATPVIDENGTIYF-GTRNGKF 317 (330)
T ss_dssp EC-TTSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEEE-ECTTSCE
T ss_pred EC-CCCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECCCCcEEEEEEcCCccccceEEcCCCEEEE-EcCCCeE
Confidence 65 344444444444444455666655 48889999999999964332222211 1222 55567776544 5555543
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.88 E-value=2.1e-07 Score=91.28 Aligned_cols=168 Identities=7% Similarity=0.012 Sum_probs=107.2
Q ss_pred ccCCceeEEEEeeCCCcEEEEEeC-----CceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCe
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGHA-----DGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSI 282 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~~-----dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 282 (528)
.+...+..++|++++. ++++-.. ++.|.+||+.++. ....+..... . ..+...+
T Consensus 64 ~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~~i~~~d~~tg~-~~~~~~~~~~----------------~---~~~~~~~ 122 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGI-VWMLDNGNQSKSVPKLVAWDTLNNQ-LSRVIYLPPP----------------I---TLSNSFV 122 (343)
T ss_dssp CCCSCEEEEEECSSSE-EEEEECHHHHTSCCEEEEEETTTTE-EEEEEECCTT----------------T---SCTTCCC
T ss_pred cceeEeeEEEEcCCCc-EEEEcCCCCcCCCCeEEEEECCCCe-EEEEEECChh----------------h---ccccccc
Confidence 3667899999999987 5555433 5789999987521 1111100000 0 0112456
Q ss_pred EEEEECCCCCEE-EEEe---CCCcEEEEecCCceEEeeecccC-----------------------------CCeEEEEE
Q 009715 283 NSIAFSTDGTYL-ATVG---RDGYLRVFDYSKEQLICGGKSYY-----------------------------GALLCCAW 329 (528)
Q Consensus 283 ~~l~~spdg~~l-~s~~---~dg~i~vwd~~~~~~~~~~~~~~-----------------------------~~v~~l~~ 329 (528)
..+++++++..+ ++-. .++.|.+||+.+++....+..|. ..+..|+|
T Consensus 123 ~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~ 202 (343)
T 2qe8_A 123 NDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVL 202 (343)
T ss_dssp CEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEE
T ss_pred ceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEe
Confidence 789999865444 4444 57899999999887766543321 23578999
Q ss_pred cCCCCEEEEEeCCC-cEEEEECC---CC-----eEEE--EeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCC
Q 009715 330 SMDGKYILTGGEDD-LVQVWSME---DR-----KVVA--WGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT 398 (528)
Q Consensus 330 sp~g~~l~sg~~dg-~v~vwd~~---~~-----~~~~--~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~ 398 (528)
+|+++.|+.+..++ .|..++.. .+ +... ...++......+++++ +| .++++...++
T Consensus 203 s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~-------~G------~l~va~~~~~ 269 (343)
T 2qe8_A 203 DAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDK-------DH------NIYVGDLAHS 269 (343)
T ss_dssp CTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT-------TC------CEEEEEGGGT
T ss_pred ccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECC-------CC------CEEEEccCCC
Confidence 99999888887765 44444431 11 0000 1123445667899999 88 6888888899
Q ss_pred eEEEEEccCCe
Q 009715 399 RLLLWDLEMDE 409 (528)
Q Consensus 399 ~i~lwd~~~~~ 409 (528)
.|.+||..+++
T Consensus 270 ~V~~~d~~~G~ 280 (343)
T 2qe8_A 270 AIGVITSADRA 280 (343)
T ss_dssp EEEEEETTTTE
T ss_pred eEEEEECCCCC
Confidence 99999985555
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.88 E-value=8.3e-06 Score=76.61 Aligned_cols=253 Identities=8% Similarity=-0.057 Sum_probs=145.7
Q ss_pred CeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCC
Q 009715 169 HDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDS 248 (528)
Q Consensus 169 ~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~ 248 (528)
.+|+.+.. +.|+.+++...... .......+. .....+..++|++++..++++-..++.|.++++.... . .
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~---~~~~~~~~~----~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~-~ 71 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMK---KTEAKAFLH----IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-P-T 71 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBC---GGGCEEEEE----EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-C-E
T ss_pred cEEEEEcC-CeEEEEEecCcccc---cccceeeec----CCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC-c-E
Confidence 45556554 47888887652110 000000000 0123578999999776466666677899999986421 0 0
Q ss_pred ccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEE-eCCCcEEEEecCCceEEeeecccCCCeEEE
Q 009715 249 SFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATV-GRDGYLRVFDYSKEQLICGGKSYYGALLCC 327 (528)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l 327 (528)
............+++++++..|+.+ ...+.|.+++++.................+
T Consensus 72 ------------------------~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i 127 (267)
T 1npe_A 72 ------------------------TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGI 127 (267)
T ss_dssp ------------------------EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred ------------------------EEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEE
Confidence 0011112467899999976555555 456789999987432222222222457889
Q ss_pred EEcCCCCEEEEEeC---CCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEE
Q 009715 328 AWSMDGKYILTGGE---DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWD 404 (528)
Q Consensus 328 ~~sp~g~~l~sg~~---dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd 404 (528)
+++|++..|..+.. .+.|..++++...........-.....++++| ++. .++++....+.|.++|
T Consensus 128 ~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~-------~~~-----~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 128 VTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDA-------FSS-----QLCWVDAGTHRAECLN 195 (267)
T ss_dssp EEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEET-------TTT-----EEEEEETTTTEEEEEE
T ss_pred EEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcC-------CCC-----EEEEEECCCCEEEEEe
Confidence 99997666655543 36888888764322111222335688999998 752 5667777778999999
Q ss_pred ccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCeEEEEE-C
Q 009715 405 LEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVC-R 483 (528)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~l~t~s-~ 483 (528)
+........+.. ......++...+.|+.+. .
T Consensus 196 ~~g~~~~~~~~~------------------------------------------------~~~P~gi~~d~~~lyva~~~ 227 (267)
T 1npe_A 196 PAQPGRRKVLEG------------------------------------------------LQYPFAVTSYGKNLYYTDWK 227 (267)
T ss_dssp TTEEEEEEEEEC------------------------------------------------CCSEEEEEEETTEEEEEETT
T ss_pred cCCCceEEEecC------------------------------------------------CCCceEEEEeCCEEEEEECC
Confidence 875332211110 111245666655655554 5
Q ss_pred CCeEEEEeCCCCccccC---CCc--cceEEEccCCce
Q 009715 484 EGHIKIWMRPGVAESQS---SSS--ETVLSTSSKDKP 515 (528)
Q Consensus 484 Dg~i~iW~~~~~~~~~~---~~~--~~vl~~spd~~~ 515 (528)
.+.|.+++..+++.... +.. ..-+++.||+..
T Consensus 228 ~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~~ 264 (267)
T 1npe_A 228 TNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQCP 264 (267)
T ss_dssp TTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC-
T ss_pred CCeEEEEeCCCCCceEEEccccccccceeeecCccCC
Confidence 68899999876653221 211 222888888764
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.87 E-value=5.4e-10 Score=111.11 Aligned_cols=205 Identities=9% Similarity=-0.003 Sum_probs=108.6
Q ss_pred CCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCC
Q 009715 221 GGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRD 300 (528)
Q Consensus 221 ~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~d 300 (528)
++. .+++++.||.|+.||..++. .+..+.. +.+.+..+..++..+++++.|
T Consensus 8 ~~~-~v~~gs~dg~v~a~d~~tG~--------------------------~~W~~~~--~~~~s~p~~~~g~~~v~~s~d 58 (369)
T 2hz6_A 8 PET-LLFVSTLDGSLHAVSKRTGS--------------------------IKWTLKE--DPVLQVPTHVEEPAFLPDPND 58 (369)
T ss_dssp CTT-EEEEEETTSEEEEEETTTCC--------------------------EEEEEEC--CCSCCCC-----CCEEECTTT
T ss_pred eCC-EEEEEcCCCEEEEEECCCCC--------------------------EEEEecC--CCceecceEcCCCEEEEeCCC
Confidence 345 79999999999999987632 1111221 334444445677778888899
Q ss_pred CcEEEEecCCceEEeeecccCC-CeE-EEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCC
Q 009715 301 GYLRVFDYSKEQLICGGKSYYG-ALL-CCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQP 378 (528)
Q Consensus 301 g~i~vwd~~~~~~~~~~~~~~~-~v~-~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~ 378 (528)
+.|+.||.++++.+.....+.. .+. ...+. ++..+++++.|+.|+.||.++|+.+..+..+. .+.++|
T Consensus 59 g~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p----- 128 (369)
T 2hz6_A 59 GSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSP----- 128 (369)
T ss_dssp CCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC---------------------------
T ss_pred CEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccc-----
Confidence 9999999998887655432211 110 00111 34467788889999999999999887776543 234555
Q ss_pred CCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCce
Q 009715 379 NSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPL 458 (528)
Q Consensus 379 ~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~ 458 (528)
++ ..+++++.|+.|+.||.++++.+..+.... ...+.+..+. ..+..+.+++.++.+..+|..+++.+
T Consensus 129 --~~------~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-~~~~~~~~~~---~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 129 --ST------SLLYLGRTEYTITMYDTKTRELRWNATYFD-YAASLPEDDV---DYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp ------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-ECCBCCCCCT---TCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred --cC------CEEEEEecCCEEEEEECCCCCEEEeEeccc-ccCccccCCc---cccceEEEECCCCEEEEEECCCCcEE
Confidence 55 578889999999999999998876664321 1122222111 12345566777888899999888877
Q ss_pred EEeecCCCCeEE-EEEeCCe
Q 009715 459 VAHRVHTEPLSG-LIFTQES 477 (528)
Q Consensus 459 ~~~~~h~~~V~~-l~~s~d~ 477 (528)
-.... ..++.. ..+++++
T Consensus 197 W~~~~-~~pv~~~~~~~~dg 215 (369)
T 2hz6_A 197 WIQNY-ASPVVAFYVWQREG 215 (369)
T ss_dssp EEEEC-SSCEEEEEECTTSS
T ss_pred EEecC-CCceEEEEEecCCc
Confidence 66653 344433 3445555
No 235
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.78 E-value=2.3e-07 Score=91.40 Aligned_cols=83 Identities=10% Similarity=-0.099 Sum_probs=64.9
Q ss_pred EEEcCCCCEEEEEeC---------CCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe-C
Q 009715 327 CAWSMDGKYILTGGE---------DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG-Q 396 (528)
Q Consensus 327 l~~sp~g~~l~sg~~---------dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s-~ 396 (528)
++++||++.++++.. ++.+.++|+.+++.+..+.... ....++|+| ||+ +++++.. .
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~-------Dg~-----~l~va~~~~ 335 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQ-------DGA-----SDNYANSAG 335 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECC-------SSS-----CEEEEEETT
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECC-------CCC-----EEEEEccCC
Confidence 678999998876543 2356799999999998887433 688999999 983 3677777 6
Q ss_pred CCeEEEEEccCCeEEEEeecCCCCCC
Q 009715 397 DTRLLLWDLEMDEIVVPLRRGPLGGS 422 (528)
Q Consensus 397 D~~i~lwd~~~~~~~~~~~~~~~~~~ 422 (528)
++.|.++|+.+.+.+..+..+.....
T Consensus 336 ~~~VsVID~~t~kvv~~I~vg~~P~~ 361 (368)
T 1mda_H 336 TEVLDIYDAASDQDQSSVELDKGPES 361 (368)
T ss_dssp TTEEEEEESSSCEEEEECCCCSCCCE
T ss_pred CCeEEEEECCCCcEEEEEECCCCCCE
Confidence 99999999999999998876544333
No 236
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.78 E-value=7.5e-07 Score=95.55 Aligned_cols=252 Identities=12% Similarity=0.090 Sum_probs=150.2
Q ss_pred eeeeCCCccEEEEeCCCcEEEEeCCCC-CC-----C----CCCCCeEEEEec------CCcEEEEEccccccccccceee
Q 009715 135 NTNFDGKGTYIIFNVGDAIFISDLNSQ-DK-----D----AKDGHDLLIGLN------SGDVYSVSLRQQLQDVGKKLVG 198 (528)
Q Consensus 135 ~~~~~~~g~~~~~~~~~~i~v~~~~~~-~~-----~----~~~~~~l~~g~~------~G~v~iwd~~~~~~~~~~~~~~ 198 (528)
+.....++.+++++....-.+|.+... +. . ...+..++++.. +|.|+.+|..+....-......
T Consensus 131 v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~ 210 (677)
T 1kb0_A 131 VYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVP 210 (677)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSC
T ss_pred EEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCC
Confidence 344455789999998766666666543 11 1 124567777765 6899999987621100000000
Q ss_pred ee---------------eec--cCC---cccCCceeEEEEeeCCCcEEEEEeCCc-------------------eEEEEE
Q 009715 199 AH---------------HYN--KDG---SVNNSRCTSVTWVPGGDGAFVVGHADG-------------------NLYVYE 239 (528)
Q Consensus 199 ~~---------------~~~--~~~---~~h~~~v~~l~~~p~g~~~l~tg~~dg-------------------~v~vwd 239 (528)
.. .+. .+. .........++++|++. +++.+..++ .|..+|
T Consensus 211 ~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD 289 (677)
T 1kb0_A 211 GDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALD 289 (677)
T ss_dssp CCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred CCccccccccccccccccccccCceeEeCCCcccccceeEcCCCC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEE
Confidence 00 000 000 01122234688999888 788877665 477777
Q ss_pred cCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC---CEEEEEeCCCcEEEEecCCceEEee
Q 009715 240 KSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG---TYLATVGRDGYLRVFDYSKEQLICG 316 (528)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg---~~l~s~~~dg~i~vwd~~~~~~~~~ 316 (528)
..++ ...-.++..... ...+.. ......+....+| ..|+.++.+|.|+++|.++|+.+..
T Consensus 290 ~~TG-~~~W~~~~~~~d---------------~wd~~~-~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~ 352 (677)
T 1kb0_A 290 PDTG-KYKWHYQETPGD---------------NWDYTS-TQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISA 352 (677)
T ss_dssp TTTC-CEEEEEESSTTC---------------CSCCCC-CSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred CCCC-CEEEEEecCCCc---------------cccccc-CCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecc
Confidence 7652 221111110000 000000 0122223333477 6789999999999999999998765
Q ss_pred ecccC----------C-Ce------------------------EEEEEcCCCCEEEEEeC--------------------
Q 009715 317 GKSYY----------G-AL------------------------LCCAWSMDGKYILTGGE-------------------- 341 (528)
Q Consensus 317 ~~~~~----------~-~v------------------------~~l~~sp~g~~l~sg~~-------------------- 341 (528)
+.... + ++ ..++++|+..++++...
T Consensus 353 ~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~ 432 (677)
T 1kb0_A 353 KNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPG 432 (677)
T ss_dssp EESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTT
T ss_pred ccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccc
Confidence 53211 0 00 14688998888777543
Q ss_pred -----------------------CCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCC
Q 009715 342 -----------------------DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT 398 (528)
Q Consensus 342 -----------------------dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~ 398 (528)
.+.|..||+.+++.+..+. +...+....+.. +| .+++.++.|+
T Consensus 433 ~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~-------~g------~~v~~g~~dg 498 (677)
T 1kb0_A 433 KPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTT-------AG------NVVFQGTADG 498 (677)
T ss_dssp STTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEE-------TT------TEEEEECTTS
T ss_pred ccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEe-------CC------CEEEEECCCC
Confidence 2679999999999888776 444444445555 54 3677789999
Q ss_pred eEEEEEccCCeEEEEeecCC
Q 009715 399 RLLLWDLEMDEIVVPLRRGP 418 (528)
Q Consensus 399 ~i~lwd~~~~~~~~~~~~~~ 418 (528)
.+++||+++++.+..+....
T Consensus 499 ~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 499 RLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp EEEEEETTTCCEEEEEECSS
T ss_pred cEEEEECCCCceeeeeeCCC
Confidence 99999999999999987654
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.72 E-value=3.3e-05 Score=72.38 Aligned_cols=211 Identities=7% Similarity=-0.088 Sum_probs=127.2
Q ss_pred CCCCeEEEE-ecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 166 KDGHDLLIG-LNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 166 ~~~~~l~~g-~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
+++..|++. ..++.|..+++.... .. . +... .......+++++++.+++++-...+.|.+++++..
T Consensus 45 ~~~~~ly~~d~~~~~I~~~~~~g~~------~~--~-~~~~---~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~- 111 (267)
T 1npe_A 45 CVDKVVYWTDISEPSIGRASLHGGE------PT--T-IIRQ---DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT- 111 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEESSSCC------CE--E-EECT---TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-
T ss_pred cCCCEEEEEECCCCEEEEEecCCCC------cE--E-EEEC---CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC-
Confidence 444445443 446788888876421 00 0 1110 12457899999976646666667789999997631
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeC---CCcEEEEecCCceEEeeecccC
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGR---DGYLRVFDYSKEQLICGGKSYY 321 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~---dg~i~vwd~~~~~~~~~~~~~~ 321 (528)
....+ ..........++++|++..|+.+.. .+.|..++++............
T Consensus 112 -~~~~~------------------------~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~ 166 (267)
T 1npe_A 112 -QRRVL------------------------FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNL 166 (267)
T ss_dssp -SCEEE------------------------ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTC
T ss_pred -CEEEE------------------------EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCC
Confidence 11000 0001145679999997666665553 3678888886332211111223
Q ss_pred CCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeE
Q 009715 322 GALLCCAWSMDGKYILTG-GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRL 400 (528)
Q Consensus 322 ~~v~~l~~sp~g~~l~sg-~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i 400 (528)
.....++++|++..|..+ ...+.|.++|+........+.+ ......++.. ++ .++++....+.|
T Consensus 167 ~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--------~~------~lyva~~~~~~v 231 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--------GK------NLYYTDWKTNSV 231 (267)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--------TT------EEEEEETTTTEE
T ss_pred CCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--------CC------EEEEEECCCCeE
Confidence 457889999987766554 4567899999976544333332 2344567654 33 566666677899
Q ss_pred EEEEccCCeEEEEeecCC--CCCCCeecCCC
Q 009715 401 LLWDLEMDEIVVPLRRGP--LGGSPTFSTGS 429 (528)
Q Consensus 401 ~lwd~~~~~~~~~~~~~~--~~~~~~~s~~~ 429 (528)
..+|..+++.+..+.... ....+++.+++
T Consensus 232 ~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 232 IAMDLAISKEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp EEEETTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred EEEeCCCCCceEEEccccccccceeeecCcc
Confidence 999999999888876432 34455555543
No 238
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.69 E-value=8.3e-05 Score=81.46 Aligned_cols=326 Identities=13% Similarity=0.092 Sum_probs=186.4
Q ss_pred eeeCCCccEEEEeCCCcEEEEeCCCCCCC---------------------CCCCCeEEEEecCCcEEEEEcccccccccc
Q 009715 136 TNFDGKGTYIIFNVGDAIFISDLNSQDKD---------------------AKDGHDLLIGLNSGDVYSVSLRQQLQDVGK 194 (528)
Q Consensus 136 ~~~~~~g~~~~~~~~~~i~v~~~~~~~~~---------------------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~ 194 (528)
+..+.+|.+|+-..++.++.++....... ......|++|+.+ -|.+||.....
T Consensus 220 i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~----- 293 (795)
T 4a2l_A 220 ILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDS----- 293 (795)
T ss_dssp EEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTE-----
T ss_pred EEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCe-----
Confidence 34456677777655556776665432100 1123456677766 47888865421
Q ss_pred ceeeeeeec----cCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCC
Q 009715 195 KLVGAHHYN----KDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSN 270 (528)
Q Consensus 195 ~~~~~~~~~----~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (528)
. ..+. .........|.++...++|. |..|..++-|..|+..... ...+..... .+
T Consensus 294 -~---~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~--~~~~~~~~~-------------~~ 352 (795)
T 4a2l_A 294 -F---ASYSSNPVENGSLSQRSVRSIFMDSQGG--MWLGTYFGGLNYYHPIRNR--FKNIRNIPY-------------KN 352 (795)
T ss_dssp -E---EEECCCTTSTTSCSSSCEEEEEECTTSC--EEEEESSSCEEEECGGGGS--SEEECCCTT-------------SS
T ss_pred -E---EEEecCCCCCCCCCCCcEEEEEEeCCcC--EEEEECCCCeEEeCCCccc--ceEEcCCCC-------------CC
Confidence 1 1111 11223456799999999887 7778888888899865321 000000000 00
Q ss_pred CeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecc--------cCCCeEEEEEcCCCCEEEEEeCC
Q 009715 271 PIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKS--------YYGALLCCAWSMDGKYILTGGED 342 (528)
Q Consensus 271 ~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~--------~~~~v~~l~~sp~g~~l~sg~~d 342 (528)
......|.++...++|. |..|+.++-|..||..+++....... ....|.++...+++++|..|..+
T Consensus 353 -----~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~ 426 (795)
T 4a2l_A 353 -----SLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHA 426 (795)
T ss_dssp -----SCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETT
T ss_pred -----CCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCc
Confidence 00135689999988886 55677777799999987765432211 13568899988899856777777
Q ss_pred CcEEEEECCCCeEEEEee----cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC-
Q 009715 343 DLVQVWSMEDRKVVAWGE----GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG- 417 (528)
Q Consensus 343 g~v~vwd~~~~~~~~~~~----~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~- 417 (528)
+-|.+||.++++...... .....|.++..++ +| . |..++. +-|.+||..+++........
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-------~g------~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~ 491 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG-------EG------N-LWLGTL-SALVRFNPEQRSFTTIEKEKD 491 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS-------SS------C-EEEEES-SCEEEEETTTTEEEECCBCTT
T ss_pred CceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC-------CC------C-EEEEec-CceeEEeCCCCeEEEcccccc
Confidence 789999998876543321 1345799999887 77 3 444444 45888998877654322110
Q ss_pred ------CCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEee-------cCCCCeEEEEEeCCe-EEEEEC
Q 009715 418 ------PLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHR-------VHTEPLSGLIFTQES-VLTVCR 483 (528)
Q Consensus 418 ------~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~-------~h~~~V~~l~~s~d~-l~t~s~ 483 (528)
..+..+.... +..+-+++. ..+..++....+. .+. .+...|.++...+++ |..++.
T Consensus 492 ~~~~~~~~i~~i~~d~-------~g~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~ 561 (795)
T 4a2l_A 492 GTPVVSKQITTLFRDS-------HKRLWIGGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR 561 (795)
T ss_dssp CCBCCCCCEEEEEECT-------TCCEEEEES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES
T ss_pred ccccCCceEEEEEECC-------CCCEEEEeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC
Confidence 0011111111 222333444 4456666544332 111 234578999988876 666666
Q ss_pred CCeEEEEeCCCCccccCC----C-ccce--EEEccCCceEEEee
Q 009715 484 EGHIKIWMRPGVAESQSS----S-SETV--LSTSSKDKPLLSSK 520 (528)
Q Consensus 484 Dg~i~iW~~~~~~~~~~~----~-~~~v--l~~spd~~~l~s~~ 520 (528)
. -|..||..++...... . ...| +...++|+..+++.
T Consensus 562 ~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~ 604 (795)
T 4a2l_A 562 E-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTN 604 (795)
T ss_dssp S-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEET
T ss_pred C-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEcC
Confidence 5 6788887665432221 1 1234 33456676666553
No 239
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.69 E-value=0.00012 Score=80.27 Aligned_cols=332 Identities=11% Similarity=0.049 Sum_probs=187.4
Q ss_pred eeeeCCCccEEEEeCCCcEEEEeCCCCCCC---------------------CCCCCeEEEEecCCcEEEEEccccccccc
Q 009715 135 NTNFDGKGTYIIFNVGDAIFISDLNSQDKD---------------------AKDGHDLLIGLNSGDVYSVSLRQQLQDVG 193 (528)
Q Consensus 135 ~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~---------------------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~ 193 (528)
.+..+.+|.+|+-..+ .+.+++....... .-....|.+|+.++-|..|+......
T Consensus 267 ~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~--- 342 (795)
T 4a2l_A 267 SLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRF--- 342 (795)
T ss_dssp EEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSS---
T ss_pred EEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccc---
Confidence 3556778888876644 7777765432110 11234577888888888888654210
Q ss_pred cceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeE
Q 009715 194 KKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIA 273 (528)
Q Consensus 194 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (528)
................|.++...++|. |..|..++-|..|+..+.. ...+..... ...
T Consensus 343 ---~~~~~~~~~~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~--~~~~~~~~~------------~~~--- 400 (795)
T 4a2l_A 343 ---KNIRNIPYKNSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPITQR--FTSYTLQED------------ESA--- 400 (795)
T ss_dssp ---EEECCCTTSSSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTTCC--EEEECCC--------------------
T ss_pred ---eEEcCCCCCCCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCCCc--EEEEecCCC------------Ccc---
Confidence 000000001122456799999988886 7778888789999876421 000000000 000
Q ss_pred EEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeec----ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 009715 274 RWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGK----SYYGALLCCAWSMDGKYILTGGEDDLVQVWS 349 (528)
Q Consensus 274 ~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~----~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd 349 (528)
.......|.++...++++.|..|+.++-|.+||..+++...... .....|.++...++|.+.+.. . +-|.+||
T Consensus 401 -~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~ 477 (795)
T 4a2l_A 401 -RGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFN 477 (795)
T ss_dssp --CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEE
T ss_pred -cCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEe
Confidence 00013578899998888867777877779999998876543221 124578999988888855544 4 4588899
Q ss_pred CCCCeEEEEeec------CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCC---
Q 009715 350 MEDRKVVAWGEG------HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLG--- 420 (528)
Q Consensus 350 ~~~~~~~~~~~~------h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~--- 420 (528)
.++++....... ....|.++..++ +| .|..++. +-|..||..+++. .+......
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-------~g-------~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~~~l 540 (795)
T 4a2l_A 478 PEQRSFTTIEKEKDGTPVVSKQITTLFRDS-------HK-------RLWIGGE-EGLSVFKQEGLDI--QKASILPVSNV 540 (795)
T ss_dssp TTTTEEEECCBCTTCCBCCCCCEEEEEECT-------TC-------CEEEEES-SCEEEEEEETTEE--EECCCSCSCGG
T ss_pred CCCCeEEEccccccccccCCceEEEEEECC-------CC-------CEEEEeC-CceEEEeCCCCeE--EEecCCCCCCC
Confidence 887765433211 236799999988 87 3444444 5688899888765 33210000
Q ss_pred ---CCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeec----CCCCeEEEEEeCCe-EEEEECCCeEEEEeC
Q 009715 421 ---GSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRV----HTEPLSGLIFTQES-VLTVCREGHIKIWMR 492 (528)
Q Consensus 421 ---~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~----h~~~V~~l~~s~d~-l~t~s~Dg~i~iW~~ 492 (528)
....+..+ .+..+-+++.. .+..+|..+.+. ..+.. ....|.++...+++ |..++. +-|..|+.
T Consensus 541 ~~~~i~~i~~d-----~~g~lWigT~~-Gl~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~-~Gl~~~~~ 612 (795)
T 4a2l_A 541 TKLFTNCIYEA-----SNGIIWVGTRE-GFYCFNEKDKQI-KRYNTTNGLPNNVVYGILEDSFGRLWLSTN-RGISCFNP 612 (795)
T ss_dssp GGSCEEEEEEC-----TTSCEEEEESS-CEEEEETTTTEE-EEECGGGTCSCSCEEEEEECTTSCEEEEET-TEEEEEET
T ss_pred CCCeeEEEEEC-----CCCCEEEEeCC-CceeECCCCCcE-EEeCCCCCCchhheEEEEECCCCCEEEEcC-CceEEEcC
Confidence 00011111 12233334443 566676554322 22221 23468888888875 666664 55777887
Q ss_pred CCCccccCCCccc---------eEEEccCCceEEEee
Q 009715 493 PGVAESQSSSSET---------VLSTSSKDKPLLSSK 520 (528)
Q Consensus 493 ~~~~~~~~~~~~~---------vl~~spd~~~l~s~~ 520 (528)
..+........++ -+...+||+..+.+.
T Consensus 613 ~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~ 649 (795)
T 4a2l_A 613 ETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGI 649 (795)
T ss_dssp TTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEET
T ss_pred CCCcEEEcCCcCCCccccCccCceeECCCCeEEEecC
Confidence 7655332221111 134467777666543
No 240
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.65 E-value=1.1e-05 Score=86.51 Aligned_cols=294 Identities=13% Similarity=0.144 Sum_probs=164.8
Q ss_pred CCCccEEEEeCCCcEEEEeCCCCCCC---------------CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeec
Q 009715 139 DGKGTYIIFNVGDAIFISDLNSQDKD---------------AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYN 203 (528)
Q Consensus 139 ~~~g~~~~~~~~~~i~v~~~~~~~~~---------------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~ 203 (528)
..++.+.+++....-.+|..+..... ...+..+++++.+|.|+.+|..+. +.+=. ....
T Consensus 73 ~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG-----~~~W~-~~~~ 146 (668)
T 1kv9_A 73 MSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTG-----KAIWS-QQTT 146 (668)
T ss_dssp EGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTC-----CEEEE-EECS
T ss_pred CCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCC-----CEeee-eccC
Confidence 34678888887666555655432210 224678889999999999998762 11100 0000
Q ss_pred c---CCcccCCceeEEEEeeCCCcEEEEEeC------CceEEEEEcCCCCCCCCcccccc-ccc-ee-----EEeccCCC
Q 009715 204 K---DGSVNNSRCTSVTWVPGGDGAFVVGHA------DGNLYVYEKSKDGAGDSSFPVIK-DQT-QF-----SVAHPRYS 267 (528)
Q Consensus 204 ~---~~~~h~~~v~~l~~~p~g~~~l~tg~~------dg~v~vwd~~~~~~~~~~~~~~~-~~~-~~-----~~~~~~~~ 267 (528)
. .......++ + .++ .++++.. +|.|+.||..++ ...-.+.... ... .+ ........
T Consensus 147 ~~~~~~~~~~~P~----v-~~~--~v~vg~~~~~~~~~g~v~a~D~~tG-~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~ 218 (668)
T 1kv9_A 147 DPAKPYSITGAPR----V-VKG--KVIIGNGGAEYGVRGFVSAYDADTG-KLAWRFYTVPGDPALPYEHPELREAAKTWQ 218 (668)
T ss_dssp CTTSSCBCCSCCE----E-ETT--EEEECCBCTTTCCBCEEEEEETTTC-CEEEEEESSCCCTTSCCSSHHHHHHHTTCC
T ss_pred CCCCcceecCCCE----E-ECC--EEEEeCCCCCcCCCCEEEEEECCCC-cEEEEecccCCCCCccccccccccccccCC
Confidence 0 000111121 1 144 4555543 589999998763 2222221100 000 00 00000000
Q ss_pred CCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCC-------------------cEEEEecCCceEEeeecc--cC-----
Q 009715 268 KSNPIARWHICQGSINSIAFSTDGTYLATVGRDG-------------------YLRVFDYSKEQLICGGKS--YY----- 321 (528)
Q Consensus 268 ~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg-------------------~i~vwd~~~~~~~~~~~~--~~----- 321 (528)
...+.....+......+++.|+...++.+..++ .|..+|.++++.+..+.. |.
T Consensus 219 -g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~ 297 (668)
T 1kv9_A 219 -GDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT 297 (668)
T ss_dssp -SSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC
T ss_pred -ccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc
Confidence 000000001122234578888888888887766 399999999999877653 22
Q ss_pred --CCeEEEEEcCCCC---EEEEEeCCCcEEEEECCCCeEEEEeecCC-CCeE----------------------------
Q 009715 322 --GALLCCAWSMDGK---YILTGGEDDLVQVWSMEDRKVVAWGEGHN-SWVS---------------------------- 367 (528)
Q Consensus 322 --~~v~~l~~sp~g~---~l~sg~~dg~v~vwd~~~~~~~~~~~~h~-~~V~---------------------------- 367 (528)
.+.....+..+|+ .++.++.+|.++++|.++++.+....... .+..
T Consensus 298 ~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~ 377 (668)
T 1kv9_A 298 ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSP 377 (668)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCT
T ss_pred CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCC
Confidence 2233333344675 68889999999999999999875443211 0111
Q ss_pred -------EEEEecCCCCCCCCCCccceeEEEE-----------------------------------EEeCCCeEEEEEc
Q 009715 368 -------GVAFDSYWSQPNSDGTAETVMYRFG-----------------------------------SVGQDTRLLLWDL 405 (528)
Q Consensus 368 -------~v~f~p~~~~~~~dg~~~~~~~~l~-----------------------------------s~s~D~~i~lwd~ 405 (528)
.++|+| +.. .+++ ....++.|..||+
T Consensus 378 ~G~~~w~~~a~dp-------~~g-----~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~ 445 (668)
T 1kv9_A 378 FGAHNWHSMSFNP-------GTG-----LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDP 445 (668)
T ss_dssp TCSSCSSCCEEET-------TTT-----EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEET
T ss_pred ccccCCCcceECC-------CCC-----EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeC
Confidence 145555 320 1111 1123488999999
Q ss_pred cCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecCC
Q 009715 406 EMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHT 465 (528)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~ 465 (528)
.+++.+..+..........+... +..+.+++.++.++.+|..+.+.+..+....
T Consensus 446 ~tG~~~W~~~~~~~~~~~~~~t~------gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 446 VKQKAAWKVPYPTHWNGGTLSTA------GNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp TTTEEEEEEEESSSCCCCEEEET------TTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCCcEEEEccCCCCCcCceeEeC------CCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 99999988876443333223222 3556678889999999999999988887543
No 241
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.59 E-value=8.2e-07 Score=87.42 Aligned_cols=100 Identities=13% Similarity=-0.079 Sum_probs=73.4
Q ss_pred EEEEEeCCc----eEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEe--
Q 009715 225 AFVVGHADG----NLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVG-- 298 (528)
Q Consensus 225 ~l~tg~~dg----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~-- 298 (528)
.+++...++ +|.++|..+. +.+..+.....+ .+.|+||+++++++.
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~--------------------------~v~~~i~vG~~P--~i~~spDg~~lyVan~~ 85 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCG--------------------------VTLGHSLGAFLS--LAVAGHSGSDFALASTS 85 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTT--------------------------EEEEEEEECTTC--EEEECTTSSCEEEEEEE
T ss_pred EEEECCccCCccceEEEEECCCC--------------------------eEEEEEeCCCCC--ceEECCCCCEEEEEccc
Confidence 444444444 8889998762 234444443445 799999999999886
Q ss_pred --------CCCcEEEEecCCceEEeeeccc-------CCCeEEEEEcCCCCEEEEEeC--CCcEEE--EECCC
Q 009715 299 --------RDGYLRVFDYSKEQLICGGKSY-------YGALLCCAWSMDGKYILTGGE--DDLVQV--WSMED 352 (528)
Q Consensus 299 --------~dg~i~vwd~~~~~~~~~~~~~-------~~~v~~l~~sp~g~~l~sg~~--dg~v~v--wd~~~ 352 (528)
.++.|.+||+.+++.+..+... ......++++|||++++++.. +..|.+ +|+.+
T Consensus 86 ~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 86 FARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp ETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred ccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 3678999999999998887533 123567999999999998875 457888 99876
No 242
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.56 E-value=1e-05 Score=80.35 Aligned_cols=210 Identities=14% Similarity=0.162 Sum_probs=128.6
Q ss_pred CCCCeEEE-EecCCcEEEEEccccccccccceeeeeeeccCC-cccCCceeEEEEeeCCCcEEEEEeCC------ceEEE
Q 009715 166 KDGHDLLI-GLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDG-SVNNSRCTSVTWVPGGDGAFVVGHAD------GNLYV 237 (528)
Q Consensus 166 ~~~~~l~~-g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~p~g~~~l~tg~~d------g~v~v 237 (528)
.++++|++ |..++.|+++|+.+....+ ++.....-.+-. ......-..+...|+| +++++..+ |.|.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p--~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREP--KIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSC--EEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCc--eeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEE
Confidence 67777766 5567899999986521110 111111000000 0011234567788998 56665555 78999
Q ss_pred EEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeec---CCCeEEEEECCCCCEEEEEe----------------
Q 009715 238 YEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHIC---QGSINSIAFSTDGTYLATVG---------------- 298 (528)
Q Consensus 238 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h---~~~v~~l~~spdg~~l~s~~---------------- 298 (528)
+|..+. +.+..|... ..--+.+.|+|+++.+++..
T Consensus 169 lD~~T~--------------------------~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~ 222 (462)
T 2ece_A 169 LDHYSF--------------------------EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHL 222 (462)
T ss_dssp ECTTTC--------------------------CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTH
T ss_pred EECCCC--------------------------eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhh
Confidence 998752 233333321 12345688899999888874
Q ss_pred ---CCCcEEEEecCCceEEeeeccc-C-CCeEEEEE--cCCCCEEEEEe------CCCcEEEEECCCCeE--EEEe--ec
Q 009715 299 ---RDGYLRVFDYSKEQLICGGKSY-Y-GALLCCAW--SMDGKYILTGG------EDDLVQVWSMEDRKV--VAWG--EG 361 (528)
Q Consensus 299 ---~dg~i~vwd~~~~~~~~~~~~~-~-~~v~~l~~--sp~g~~l~sg~------~dg~v~vwd~~~~~~--~~~~--~~ 361 (528)
.+..|.+||+.+++.+..+..- . .....+.| +|+++++.+++ .++.|.+|..+.++. ...+ ..
T Consensus 223 ~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~ 302 (462)
T 2ece_A 223 KDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPA 302 (462)
T ss_dssp HHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECC
T ss_pred hhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCC
Confidence 3678999999998888776542 1 23445555 99999888777 456887776654421 1111 11
Q ss_pred C----------------CCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc---CCeEEEEeecC
Q 009715 362 H----------------NSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE---MDEIVVPLRRG 417 (528)
Q Consensus 362 h----------------~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~---~~~~~~~~~~~ 417 (528)
. ......|.++| ||+ .+.++.-..+.|.+||+. +.+.+..+..+
T Consensus 303 ~~v~~~lp~~~~~f~~~~~~pa~I~lS~-------DGr-----fLYVSnrg~d~VavfdV~d~~~~~lv~~I~tG 365 (462)
T 2ece_A 303 EPLEGNLPEILKPFKAVPPLVTDIDISL-------DDK-----FLYLSLWGIGEVRQYDISNPFKPVLTGKVKLG 365 (462)
T ss_dssp EECCSSCCGGGGGGTEECCCCCCEEECT-------TSC-----EEEEEETTTTEEEEEECSSTTSCEEEEEEECB
T ss_pred ccccccccccccccccCCCceeEEEECC-------CCC-----EEEEEeCCCCEEEEEEecCCCCcEEEEEEEeC
Confidence 0 24577899999 994 455666678899999985 33556555543
No 243
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.55 E-value=2.6e-05 Score=72.64 Aligned_cols=206 Identities=9% Similarity=-0.031 Sum_probs=132.0
Q ss_pred ceeEEEEeeCCCcEEEEEeC--CceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC
Q 009715 212 RCTSVTWVPGGDGAFVVGHA--DGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST 289 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 289 (528)
....++|++++. ++++.+. ++.|+++|+.+.. ....++. . .......+++.
T Consensus 22 f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~-v~~~i~l-----------------------~-~~~fgeGi~~~- 74 (266)
T 2iwa_A 22 FTQGLVYAENDT-LFESTGLYGRSSVRQVALQTGK-VENIHKM-----------------------D-DSYFGEGLTLL- 74 (266)
T ss_dssp CEEEEEECSTTE-EEEEECSTTTCEEEEEETTTCC-EEEEEEC-----------------------C-TTCCEEEEEEE-
T ss_pred CcccEEEeCCCe-EEEECCCCCCCEEEEEECCCCC-EEEEEec-----------------------C-CCcceEEEEEe-
Confidence 357899999864 5555443 5799999998732 1111110 0 00112245554
Q ss_pred CCCEEEEE-eCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCC-----
Q 009715 290 DGTYLATV-GRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHN----- 363 (528)
Q Consensus 290 dg~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~----- 363 (528)
+..|+.. -.++.+.++|..+.+.+..+..-... ...+++||+.++++..++.|.++|.++.+.+..+.--.
T Consensus 75 -g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~ 151 (266)
T 2iwa_A 75 -NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRV 151 (266)
T ss_dssp -TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEEC
T ss_pred -CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccc
Confidence 4455444 46789999999999998887532122 23456688877777778999999999988877776211
Q ss_pred CCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCCceeeeecC
Q 009715 364 SWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTL 443 (528)
Q Consensus 364 ~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~ 443 (528)
..++.+.|. +| .+++....++.|.+.|..+++.+..+.......
T Consensus 152 ~~~nele~~--------dg------~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~---------------------- 195 (266)
T 2iwa_A 152 IRLNELEYI--------NG------EVWANIWQTDCIARISAKDGTLLGWILLPNLRK---------------------- 195 (266)
T ss_dssp CCEEEEEEE--------TT------EEEEEETTSSEEEEEETTTCCEEEEEECHHHHH----------------------
T ss_pred ccceeEEEE--------CC------EEEEecCCCCeEEEEECCCCcEEEEEECCCccc----------------------
Confidence 246778876 56 566666678899999999999887775410000
Q ss_pred CCCceeeecCCCCceEEeecCCCCeEEEEEeCCe---EEEEECCCeEEEEeCCCC
Q 009715 444 QPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES---VLTVCREGHIKIWMRPGV 495 (528)
Q Consensus 444 ~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~---l~t~s~Dg~i~iW~~~~~ 495 (528)
+ .+..-..-......|+|+|++ ++|+...+.|.+-++...
T Consensus 196 -------~-----~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 196 -------K-----LIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp -------H-----HHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred -------c-----cccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 0 000000012456899999973 777778899988887554
No 244
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.55 E-value=0.00036 Score=76.18 Aligned_cols=320 Identities=11% Similarity=0.075 Sum_probs=176.3
Q ss_pred ceeeeCCCccEEEEeCCCcEEEEeCCCCCCC---------------------CCCCCeEEEEecCCcEEEEEcccccccc
Q 009715 134 TNTNFDGKGTYIIFNVGDAIFISDLNSQDKD---------------------AKDGHDLLIGLNSGDVYSVSLRQQLQDV 192 (528)
Q Consensus 134 ~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~---------------------~~~~~~l~~g~~~G~v~iwd~~~~~~~~ 192 (528)
..+..+.+|.+|+-... .++.++....... ......|++|+..+-|.++|........
T Consensus 214 ~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~ 292 (781)
T 3v9f_A 214 RCIYKDTNGNIWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLL 292 (781)
T ss_dssp EEEEECTTCCEEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC----
T ss_pred eEEEEcCCCCEEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeee
Confidence 34556778888877644 7777775432111 1134467778876678888876521110
Q ss_pred ccce-eeee-eeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCC
Q 009715 193 GKKL-VGAH-HYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSN 270 (528)
Q Consensus 193 ~~~~-~~~~-~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (528)
.... .... ............|.++...++|. |..|..++-|..|+..... ...+...... ....
T Consensus 293 ~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~----------~~~~ 358 (781)
T 3v9f_A 293 PEQIRFEFIREGDNNYSLSNASARYIFQDSFNN--IWIGTWGGGINFISNAPPT--FHTWSYSPTQ----------MNES 358 (781)
T ss_dssp -----CEEECBCSSTTSBSSSCEEEEEECSSCC--EEEEEBSSCEEEECSSCCS--CEEEC----C----------CCSS
T ss_pred eeccccccccCCCCCCCCCCCeEEEEEEeCCCC--EEEEecCCeEEEeCCCCCc--ceeeccCccc----------cccC
Confidence 0000 0000 00011223567899999999886 7778877888888875421 0111000000 0000
Q ss_pred CeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeee---cccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q 009715 271 PIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGG---KSYYGALLCCAWSMDGKYILTGGEDDLVQV 347 (528)
Q Consensus 271 ~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~---~~~~~~v~~l~~sp~g~~l~sg~~dg~v~v 347 (528)
......|.++...++|. |..|+.++-|..||..+++..... ......|.++...+++.+. .|..++-|..
T Consensus 359 -----~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~ 431 (781)
T 3v9f_A 359 -----SLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLW-FGTYLGNISY 431 (781)
T ss_dssp -----CCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEE-EEETTEEEEE
T ss_pred -----CCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEE-EEeccCCEEE
Confidence 00135688999888876 556666666899998765443211 1123568889888888754 4666677889
Q ss_pred EECCCCeEEEEee--cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCC-C--CCC
Q 009715 348 WSMEDRKVVAWGE--GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGP-L--GGS 422 (528)
Q Consensus 348 wd~~~~~~~~~~~--~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~-~--~~~ 422 (528)
||.++++...... .....|.++..++ +| .|..++. +-|..||..+++......... . ...
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~v~~i~~d~-------~g-------~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (781)
T 3v9f_A 432 YNTRLKKFQIIELEKNELLDVRVFYEDK-------NK-------KIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENF 496 (781)
T ss_dssp ECSSSCEEEECCSTTTCCCCEEEEEECT-------TS-------EEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSC
T ss_pred EcCCCCcEEEeccCCCCCCeEEEEEECC-------CC-------CEEEEEC-CceEEEeCCCCeEEecccCcccccccce
Confidence 9988776433221 1346799999887 77 3444555 568889987765433221110 0 000
Q ss_pred -CeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEee----cCCCCeEEEEEeCCe-EEEEECCCeEEEEeCCCCc
Q 009715 423 -PTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHR----VHTEPLSGLIFTQES-VLTVCREGHIKIWMRPGVA 496 (528)
Q Consensus 423 -~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~----~h~~~V~~l~~s~d~-l~t~s~Dg~i~iW~~~~~~ 496 (528)
..+..+ .+..+=+++....+..++....+ +..+. .....|.++...+++ |..++.+|.|..||..++.
T Consensus 497 i~~i~~d-----~~g~lWigt~~~Gl~~~~~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 497 VRSIAQD-----SEGRFWIGTFGGGVGIYTPDMQL-VRKFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPSARNFD 570 (781)
T ss_dssp EEEEEEC-----TTCCEEEEESSSCEEEECTTCCE-EEEECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESCTTTCC
T ss_pred eEEEEEc-----CCCCEEEEEcCCCEEEEeCCCCe-EEEccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEECCCCCc
Confidence 011111 12233344443445556654432 22221 124578899888875 7777776665888876654
No 245
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.55 E-value=8.1e-06 Score=83.94 Aligned_cols=211 Identities=17% Similarity=0.106 Sum_probs=132.3
Q ss_pred CCCCeEEEEec-CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEE-e-eCCCcEEEEEe------------
Q 009715 166 KDGHDLLIGLN-SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTW-V-PGGDGAFVVGH------------ 230 (528)
Q Consensus 166 ~~~~~l~~g~~-~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~-p~g~~~l~tg~------------ 230 (528)
+||++|++... ++.|.+.|+.+.. ...... .+ .......+++ . |++. ++++++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~------~~~ii~-ip----~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~ 166 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMK------CDAILE-IP----NAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTN 166 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTE------EEEEEE-CS----SCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSS
T ss_pred cCCCEEEEEcCCCCEEEEEECCCce------EeeEEe-CC----CCCCCcceeeeecCCCc-EEEEecccccccCCCCcc
Confidence 57777777665 4468889987621 000001 00 2234678888 4 8999 666663
Q ss_pred ------CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCC---
Q 009715 231 ------ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDG--- 301 (528)
Q Consensus 231 ------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg--- 301 (528)
.++.|.+.|..+. +.+..+... +....++++|||+++++.+.+.
T Consensus 167 l~~~~~~~~~vtvID~~t~--------------------------~v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~ 219 (595)
T 1fwx_A 167 MEDVANYVNVFTAVDADKW--------------------------EVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKG 219 (595)
T ss_dssp TTCGGGEEEEEEEEETTTT--------------------------EEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCC
T ss_pred cccccccCceEEEEECCCC--------------------------eEEEEEEeC-CCccceEECCCCCEEEEEecCcccC
Confidence 3456777776541 111111111 1234567777877777776442
Q ss_pred -----------------------------------cEEEEecCC--ceE-EeeecccCCCeEEEEEcCCCCEEEEEe-CC
Q 009715 302 -----------------------------------YLRVFDYSK--EQL-ICGGKSYYGALLCCAWSMDGKYILTGG-ED 342 (528)
Q Consensus 302 -----------------------------------~i~vwd~~~--~~~-~~~~~~~~~~v~~l~~sp~g~~l~sg~-~d 342 (528)
.|.|.|.++ ++. +..+.. .....++.++|||+++++++ .+
T Consensus 220 ~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s 298 (595)
T 1fwx_A 220 MTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLS 298 (595)
T ss_dssp SSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTS
T ss_pred cchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCC
Confidence 467777766 333 333322 23456899999999877765 57
Q ss_pred CcEEEEECCCCe------------EEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC---
Q 009715 343 DLVQVWSMEDRK------------VVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM--- 407 (528)
Q Consensus 343 g~v~vwd~~~~~------------~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~--- 407 (528)
..|.++|+.+.+ .+..+. -......++|+| || +..++.-.|++|.+||+..
T Consensus 299 ~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~-------dG------~aY~t~~ldsqV~kwdi~~a~~ 364 (595)
T 1fwx_A 299 PTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDG-------RG------NAYTSLFLDSQVVKWNIEDAIR 364 (595)
T ss_dssp SBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECT-------TS------EEEEEETTTTEEEEEEHHHHHH
T ss_pred CeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECC-------CC------eEEEEEecCCcEEEEEhhHhhh
Confidence 899999998653 344443 345678899999 99 6788888999999999987
Q ss_pred -------CeEEEEeecCCCC------CCCeecCCCC
Q 009715 408 -------DEIVVPLRRGPLG------GSPTFSTGSQ 430 (528)
Q Consensus 408 -------~~~~~~~~~~~~~------~~~~~s~~~~ 430 (528)
.+.+..+..+... ...++++++.
T Consensus 365 ~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk 400 (595)
T 1fwx_A 365 AYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND 400 (595)
T ss_dssp HHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS
T ss_pred hhcccccceeEEEeecccccccceeccceEeCCCCC
Confidence 5667777654332 4455666664
No 246
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.49 E-value=1.5e-05 Score=74.18 Aligned_cols=185 Identities=17% Similarity=0.161 Sum_probs=119.5
Q ss_pred eEEEEec---CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCC
Q 009715 170 DLLIGLN---SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAG 246 (528)
Q Consensus 170 ~l~~g~~---~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~ 246 (528)
.|+++.. ++.|.++|+.+. +. .....+. .......+++. ++.++++.-.++.+.++|..+..
T Consensus 33 ~Lyvstg~~~~s~v~~iD~~tg-----~v-~~~i~l~-----~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~-- 97 (266)
T 2iwa_A 33 TLFESTGLYGRSSVRQVALQTG-----KV-ENIHKMD-----DSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS-- 97 (266)
T ss_dssp EEEEEECSTTTCEEEEEETTTC-----CE-EEEEECC-----TTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE--
T ss_pred eEEEECCCCCCCEEEEEECCCC-----CE-EEEEecC-----CCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc--
Confidence 4555432 468888888762 11 1111111 11112234444 55366666678999999987521
Q ss_pred CCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccC-----
Q 009715 247 DSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYY----- 321 (528)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~----- 321 (528)
.+..+...... ...+++||+.|+++..++.|.++|.++.+.+..+....
T Consensus 98 ------------------------v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~ 151 (266)
T 2iwa_A 98 ------------------------NIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRV 151 (266)
T ss_dssp ------------------------EEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEEC
T ss_pred ------------------------EEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccc
Confidence 12222111011 23355578877777788899999999988776655321
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecC-------------CCCeEEEEEecCCCCCCCCCCcccee
Q 009715 322 GALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGH-------------NSWVSGVAFDSYWSQPNSDGTAETVM 388 (528)
Q Consensus 322 ~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h-------------~~~V~~v~f~p~~~~~~~dg~~~~~~ 388 (528)
..++.+.|. +++..+....++.|.+.|.++++.+.++.-. ....+.|+|+| +++
T Consensus 152 ~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~-------~~~----- 218 (266)
T 2iwa_A 152 IRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQ-------ENK----- 218 (266)
T ss_dssp CCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEET-------TTT-----
T ss_pred ccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcC-------CCC-----
Confidence 236788888 7765555556889999999999998888621 13568999999 874
Q ss_pred EEEEEEeCCCeEEEEEccCC
Q 009715 389 YRFGSVGQDTRLLLWDLEMD 408 (528)
Q Consensus 389 ~~l~s~s~D~~i~lwd~~~~ 408 (528)
.+++++.....|...++...
T Consensus 219 ~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 219 RIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEEETTCSEEEEEEEEEC
T ss_pred EEEEECCCCCeEEEEEEecc
Confidence 67888888899999988764
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.48 E-value=0.0001 Score=78.83 Aligned_cols=211 Identities=9% Similarity=0.039 Sum_probs=124.3
Q ss_pred CCcEEEEecCCceEEeeecccC-------------------------------CCeEEEEEcCCCCEEEEEeCCC-----
Q 009715 300 DGYLRVFDYSKEQLICGGKSYY-------------------------------GALLCCAWSMDGKYILTGGEDD----- 343 (528)
Q Consensus 300 dg~i~vwd~~~~~~~~~~~~~~-------------------------------~~v~~l~~sp~g~~l~sg~~dg----- 343 (528)
++.|+.+|.++|+.+..+.... .....+++.|+..+++.+..++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 5899999999999887664210 0112467888888888887765
Q ss_pred --------------cEEEEECCCCeEEEEeec--CC-------CCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeE
Q 009715 344 --------------LVQVWSMEDRKVVAWGEG--HN-------SWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRL 400 (528)
Q Consensus 344 --------------~v~vwd~~~~~~~~~~~~--h~-------~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i 400 (528)
.|..+|.++++.+..++. |. .+.....+.. +|+ ....++.++.+|.+
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~-------~G~---~~~~v~~~~~~G~l 326 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI-------DGK---PRKVLMQAPKNGFF 326 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-------TTE---EEEEEEECCTTSEE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEecc-------CCc---EEEEEEEECCCCEE
Confidence 399999999998877763 33 2222223333 551 11368899999999
Q ss_pred EEEEccCCeEEEEeecCCCC-------------------------------------CCCeecCCCCC------------
Q 009715 401 LLWDLEMDEIVVPLRRGPLG-------------------------------------GSPTFSTGSQS------------ 431 (528)
Q Consensus 401 ~lwd~~~~~~~~~~~~~~~~-------------------------------------~~~~~s~~~~~------------ 431 (528)
.++|..+++.+..+...... ..++++++...
T Consensus 327 ~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~ 406 (668)
T 1kv9_A 327 YVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVY 406 (668)
T ss_dssp EEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEE
T ss_pred EEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEe
Confidence 99999999988554432100 00222222110
Q ss_pred ----ccCC--ceee------------eecCCCCceeeecCCCCceEEeecCCCCe-EEEEEeCCeEEEEECCCeEEEEeC
Q 009715 432 ----AHWD--NVCP------------VGTLQPAPSMRDVPKLSPLVAHRVHTEPL-SGLIFTQESVLTVCREGHIKIWMR 492 (528)
Q Consensus 432 ----~~~d--~~~~------------~g~~~~~~~~~d~~~~~~~~~~~~h~~~V-~~l~~s~d~l~t~s~Dg~i~iW~~ 492 (528)
..|. .... ....++.+..+|..+.+.+-....+.... ..+....+.|+.++.|+.|++||.
T Consensus 407 ~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~ 486 (668)
T 1kv9_A 407 RNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSA 486 (668)
T ss_dssp CCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred eeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhh
Confidence 0000 0000 11122557778888888776665443222 123333345888899999999999
Q ss_pred CCCccccCC-Cccce----EEEccCCc-eEEEee
Q 009715 493 PGVAESQSS-SSETV----LSTSSKDK-PLLSSK 520 (528)
Q Consensus 493 ~~~~~~~~~-~~~~v----l~~spd~~-~l~s~~ 520 (528)
.+++..... ....+ +.+..+|+ |++.++
T Consensus 487 ~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 487 DKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp TTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred hcChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 887743221 11212 55567777 444443
No 248
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.43 E-value=0.00014 Score=76.17 Aligned_cols=160 Identities=10% Similarity=-0.020 Sum_probs=98.3
Q ss_pred EEEECCCCCEEEEEeCC----------------CcEEEEecCCceEEeeecc--cC--------CCeEEEEEcCCCC---
Q 009715 284 SIAFSTDGTYLATVGRD----------------GYLRVFDYSKEQLICGGKS--YY--------GALLCCAWSMDGK--- 334 (528)
Q Consensus 284 ~l~~spdg~~l~s~~~d----------------g~i~vwd~~~~~~~~~~~~--~~--------~~v~~l~~sp~g~--- 334 (528)
.+++.++...++.+..+ +.|..+|.++++.+..+.. |. .++ -+...++|+
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~ 317 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTP 317 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEE
Confidence 35666765666666532 3599999999998876642 11 122 123334774
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEeecCC--CC-----------e--------------------------EEEEEecCC
Q 009715 335 YILTGGEDDLVQVWSMEDRKVVAWGEGHN--SW-----------V--------------------------SGVAFDSYW 375 (528)
Q Consensus 335 ~l~sg~~dg~v~vwd~~~~~~~~~~~~h~--~~-----------V--------------------------~~v~f~p~~ 375 (528)
.++.++.+|.+.++|.++++.+....-.. .+ + ..++|+|
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-- 395 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDP-- 395 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET--
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECC--
Confidence 57788899999999999999887654211 11 1 1245555
Q ss_pred CCCCCCCCccceeEEEEEEe-------------------------------------CCCeEEEEEccCCeEEEEeecCC
Q 009715 376 SQPNSDGTAETVMYRFGSVG-------------------------------------QDTRLLLWDLEMDEIVVPLRRGP 418 (528)
Q Consensus 376 ~~~~~dg~~~~~~~~l~s~s-------------------------------------~D~~i~lwd~~~~~~~~~~~~~~ 418 (528)
+. .+|+... .++.|..||+.+++.+..+....
T Consensus 396 -----~~------g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~ 464 (571)
T 2ad6_A 396 -----ES------RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF 464 (571)
T ss_dssp -----TT------TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS
T ss_pred -----CC------CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC
Confidence 33 1232221 35788999999998888776543
Q ss_pred CCCCCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeec
Q 009715 419 LGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRV 463 (528)
Q Consensus 419 ~~~~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~ 463 (528)
......+.. -+..+.+++.++.+..+|..+++.+..+..
T Consensus 465 ~~~~~~~~t------~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 465 AAWGGTLYT------KGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp CCCSBCEEE------TTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CccceeEEE------CCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 322222111 124455567777788888888877776654
No 249
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.37 E-value=0.0011 Score=72.19 Aligned_cols=338 Identities=11% Similarity=0.061 Sum_probs=181.5
Q ss_pred eeeeCCCccEEEEeCCCcEEEEeCCCCCC----------------C-----CCCCCeEEEEecCCcEEEEEccccccccc
Q 009715 135 NTNFDGKGTYIIFNVGDAIFISDLNSQDK----------------D-----AKDGHDLLIGLNSGDVYSVSLRQQLQDVG 193 (528)
Q Consensus 135 ~~~~~~~g~~~~~~~~~~i~v~~~~~~~~----------------~-----~~~~~~l~~g~~~G~v~iwd~~~~~~~~~ 193 (528)
.+..+.+|.+|+-.....++.++...... . ......|++|+.+ -|.+||..+....
T Consensus 167 ~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~-- 243 (781)
T 3v9f_A 167 TATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTSK-GLALFNANTETFT-- 243 (781)
T ss_dssp EEEEEETTEEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEEEETT-EEEEEETTTTEEE--
T ss_pred EEEECCCCCEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEEEeCC-cHheECCCCCcEE--
Confidence 34455677777765555676666543210 0 1123346677766 5888887542110
Q ss_pred cceeeeeeeccC----CcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCC
Q 009715 194 KKLVGAHHYNKD----GSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKS 269 (528)
Q Consensus 194 ~~~~~~~~~~~~----~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (528)
.+... .......|.++...++|. |..|...+-|.+++....... .+.. ..+...... ...
T Consensus 244 -------~~~~~~~~~~~l~~~~i~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~~~--~~~~----~~f~~~~~~-~~~ 307 (781)
T 3v9f_A 244 -------NFHNNPGNIHGALSSYIFSIKQLKDNK--LWIATELNGIMILDLQQNQFL--LPEQ----IRFEFIREG-DNN 307 (781)
T ss_dssp -------C-----------CCCCEEEEEECTTSE--EEEEESSSCEEEEETTCC---------------CEEECBC-SST
T ss_pred -------EEEcCCCccccccCceEEEEEECCCCC--EEEEeCCCCeEEECCCCCeee--eeec----cccccccCC-CCC
Confidence 01100 112346799999888876 667777567888887642211 0000 000000000 000
Q ss_pred CCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeec---------ccCCCeEEEEEcCCCCEEEEEe
Q 009715 270 NPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGK---------SYYGALLCCAWSMDGKYILTGG 340 (528)
Q Consensus 270 ~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~---------~~~~~v~~l~~sp~g~~l~sg~ 340 (528)
. ......|.++...++|. |..|+.++-|..++..+........ .....|.++...++|. |..|.
T Consensus 308 ~-----~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt 380 (781)
T 3v9f_A 308 Y-----SLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGT 380 (781)
T ss_dssp T-----SBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEE
T ss_pred C-----CCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEe
Confidence 0 01236789999988886 6667767778899987554322110 0235688998888887 44566
Q ss_pred CCCcEEEEECCCCeEEEEe---ecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC
Q 009715 341 EDDLVQVWSMEDRKVVAWG---EGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG 417 (528)
Q Consensus 341 ~dg~v~vwd~~~~~~~~~~---~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~ 417 (528)
.++-|..||..+++..... ......|.++..++ +| .|..|+.++-|..+|..+++... +...
T Consensus 381 ~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-------~g-------~lWigt~~~Gl~~~~~~~~~~~~-~~~~ 445 (781)
T 3v9f_A 381 DGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS-------EG-------NLWFGTYLGNISYYNTRLKKFQI-IELE 445 (781)
T ss_dssp BSSCEEEEETTEEEEECC-----CCCSBEEEEEECT-------TS-------CEEEEETTEEEEEECSSSCEEEE-CCST
T ss_pred CCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC-------CC-------CEEEEeccCCEEEEcCCCCcEEE-eccC
Confidence 5666888998765432211 12346789999887 77 45557777789999987776432 2211
Q ss_pred -CCCCC-CeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecC-----CCCeEEEEEeCCe-EEEEECCCeEEE
Q 009715 418 -PLGGS-PTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVH-----TEPLSGLIFTQES-VLTVCREGHIKI 489 (528)
Q Consensus 418 -~~~~~-~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h-----~~~V~~l~~s~d~-l~t~s~Dg~i~i 489 (528)
..... ..+..+ .+..+-+++. ..+..++..+.+........ ...|.++...+++ |..++.++-|..
T Consensus 446 ~~~~~~v~~i~~d-----~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~ 519 (781)
T 3v9f_A 446 KNELLDVRVFYED-----KNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGI 519 (781)
T ss_dssp TTCCCCEEEEEEC-----TTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEE
T ss_pred CCCCCeEEEEEEC-----CCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEE
Confidence 00000 111111 1233334444 44666666544332222111 3578999888875 777777555777
Q ss_pred EeCCCCccccCC-----Cccce--EEEccCCceEEEe
Q 009715 490 WMRPGVAESQSS-----SSETV--LSTSSKDKPLLSS 519 (528)
Q Consensus 490 W~~~~~~~~~~~-----~~~~v--l~~spd~~~l~s~ 519 (528)
|+..++...... ....| +...++|+..+..
T Consensus 520 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 520 YTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT 556 (781)
T ss_dssp ECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE
T ss_pred EeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE
Confidence 887665432221 12334 4446677765544
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.35 E-value=6.9e-05 Score=69.00 Aligned_cols=158 Identities=10% Similarity=0.062 Sum_probs=106.3
Q ss_pred eeEEEEeeCCCcEEEEEeCCc--eEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 213 CTSVTWVPGGDGAFVVGHADG--NLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 213 v~~l~~~p~g~~~l~tg~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
...+.|+ ++. ++.+.+.+| .|+++|+.++. ... .... ..........++
T Consensus 45 tqGL~~~-~~~-LyestG~~g~S~v~~vD~~Tgk-v~~-------------------------~~~l-~~~~FgeGit~~ 95 (262)
T 3nol_A 45 TEGFFYR-NGY-FYESTGLNGRSSIRKVDIESGK-TLQ-------------------------QIEL-GKRYFGEGISDW 95 (262)
T ss_dssp EEEEEEE-TTE-EEEEEEETTEEEEEEECTTTCC-EEE-------------------------EEEC-CTTCCEEEEEEE
T ss_pred cceEEEE-CCE-EEEECCCCCCceEEEEECCCCc-EEE-------------------------EEec-CCccceeEEEEe
Confidence 4789998 665 777777766 89999998732 111 1111 112222222223
Q ss_pred CCEEEEE-eCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecC--C---C
Q 009715 291 GTYLATV-GRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGH--N---S 364 (528)
Q Consensus 291 g~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h--~---~ 364 (528)
+..|... -.++.+.+||.++.+.+..+... ..-..+ .+|++.|+.+..++.|.++|.++.+.+..+.-. . .
T Consensus 96 g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~-~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~ 172 (262)
T 3nol_A 96 KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYD-GEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELP 172 (262)
T ss_dssp TTEEEEEESSSSEEEEEETTTCCEEEEEECS-SCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECC
T ss_pred CCEEEEEEeeCCEEEEEECccCcEEEEEECC-CCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcccc
Confidence 4455544 46889999999999999887642 222233 457777777666888999999999888776532 1 3
Q ss_pred CeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 365 WVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 365 ~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
.++.+.|. +| .+++..-.+..|.+.|.++++.+..+..
T Consensus 173 ~lNELe~~--------~G------~lyan~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 173 ELNELEWV--------DG------EIFANVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp CEEEEEEE--------TT------EEEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred ccceeEEE--------CC------EEEEEEccCCeEEEEECCCCcEEEEEEC
Confidence 45667875 77 5666666788999999999999888765
No 251
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.33 E-value=0.0001 Score=67.97 Aligned_cols=157 Identities=10% Similarity=0.052 Sum_probs=109.3
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCe--EEEEECC
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSI--NSIAFST 289 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v--~~l~~sp 289 (528)
-...+.|+ ++. ++++.+.+|.|+++|+.++.. .... .. ... -.+++..
T Consensus 56 ftqGL~~~-~~~-Ly~stG~~g~v~~iD~~Tgkv-~~~~--l~-------------------------~~~FgeGit~~g 105 (268)
T 3nok_A 56 FTQGLVFH-QGH-FFESTGHQGTLRQLSLESAQP-VWME--RL-------------------------GNIFAEGLASDG 105 (268)
T ss_dssp CEEEEEEE-TTE-EEEEETTTTEEEECCSSCSSC-SEEE--EC-------------------------TTCCEEEEEECS
T ss_pred ccceEEEE-CCE-EEEEcCCCCEEEEEECCCCcE-EeEE--CC-------------------------CCcceeEEEEeC
Confidence 34678887 344 788888889999999987332 1111 00 112 2345543
Q ss_pred CCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeec--CC---C
Q 009715 290 DGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEG--HN---S 364 (528)
Q Consensus 290 dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~--h~---~ 364 (528)
+ +..+..-.++.+.+||.++.+.+..+.. ...-..++ +|++.|+.+..++.|.++|.++.+.+..+.- +. .
T Consensus 106 ~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~-~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~ 181 (268)
T 3nok_A 106 E-RLYQLTWTEGLLFTWSGMPPQRERTTRY-SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVE 181 (268)
T ss_dssp S-CEEEEESSSCEEEEEETTTTEEEEEEEC-SSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred C-EEEEEEccCCEEEEEECCcCcEEEEEeC-CCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccc
Confidence 2 3444455788999999999999988764 23223344 5788888877799999999999988877763 22 2
Q ss_pred CeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 365 WVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 365 ~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
.++.+.|. +| .+++..-.+..|.+.|.++++.+..+..
T Consensus 182 ~lNeLe~~--------dG------~lyanvw~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 182 LINELECA--------NG------VIYANIWHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp CEEEEEEE--------TT------EEEEEETTCSEEEEECTTTCBEEEEEEC
T ss_pred cccccEEe--------CC------EEEEEECCCCeEEEEeCCCCcEEEEEEC
Confidence 45778876 67 5666666788999999999999887764
No 252
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.33 E-value=0.00013 Score=79.15 Aligned_cols=133 Identities=14% Similarity=0.059 Sum_probs=82.4
Q ss_pred ceeEEEEe-eCCCcEEE-EEeCCc----eEEEEEcCCC-CCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEE
Q 009715 212 RCTSVTWV-PGGDGAFV-VGHADG----NLYVYEKSKD-GAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINS 284 (528)
Q Consensus 212 ~v~~l~~~-p~g~~~l~-tg~~dg----~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 284 (528)
.+...+|+ |||+ +|+ +...+| +|+++|+..+ ..... .+. .....
T Consensus 175 ~~~~~~~S~PDG~-~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~----------------------~~~------~~~~~ 225 (751)
T 2xe4_A 175 DVMEVKPAPPEHD-LVAFSVDMSGNEVYTIEFKRISDPSQTIAD----------------------KVS------GTNGE 225 (751)
T ss_dssp EEEEEEECTTTTC-EEEEEEESSSSSCEEEEEEETTCTTCCCCC----------------------CEE------EECSC
T ss_pred EEeeeEecCCCCC-EEEEEEeCCCCceEEEEEEECCCCCEeCCc----------------------ccc------Cceee
Confidence 67889999 9999 555 444333 5999998763 21000 000 11236
Q ss_pred EEECCCCCEEEEEeCC-----CcEEEEecCCce--EEeeec-ccCCCeEEEEEcCCCCEEEEEeC---CCcEEEEECCCC
Q 009715 285 IAFSTDGTYLATVGRD-----GYLRVFDYSKEQ--LICGGK-SYYGALLCCAWSMDGKYILTGGE---DDLVQVWSMEDR 353 (528)
Q Consensus 285 l~~spdg~~l~s~~~d-----g~i~vwd~~~~~--~~~~~~-~~~~~v~~l~~sp~g~~l~sg~~---dg~v~vwd~~~~ 353 (528)
++|+||++.|+....| ..|.++++.+++ ....+. ........+.|+|||++|+.... ...|.++|+.++
T Consensus 226 ~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 226 IVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp CEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 8899999988887765 258888887653 112222 22344667899999998886552 346888998875
Q ss_pred --eE--EEEeecCCCCeEEEEEec
Q 009715 354 --KV--VAWGEGHNSWVSGVAFDS 373 (528)
Q Consensus 354 --~~--~~~~~~h~~~V~~v~f~p 373 (528)
+. ............++.|+.
T Consensus 306 ~~~~~~~~l~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 306 NAHNTLEIVRPREKGVRYDVQMHG 329 (751)
T ss_dssp TTCCCEEESSCCCTTCCEEEEEET
T ss_pred CCCceeEEeecCCCCceEEEeeee
Confidence 33 222333445556666553
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.30 E-value=6.1e-05 Score=69.38 Aligned_cols=161 Identities=15% Similarity=0.126 Sum_probs=100.6
Q ss_pred eEE-EEecCC--cEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCC
Q 009715 170 DLL-IGLNSG--DVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAG 246 (528)
Q Consensus 170 ~l~-~g~~~G--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~ 246 (528)
.|+ +.+.+| .|+.+|+.+. +.. ....+ ..........++++.+++..-.++.+.+||..+.
T Consensus 54 ~LyestG~~g~S~v~~vD~~Tg-----kv~-~~~~l-------~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~--- 117 (262)
T 3nol_A 54 YFYESTGLNGRSSIRKVDIESG-----KTL-QQIEL-------GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNL--- 117 (262)
T ss_dssp EEEEEEEETTEEEEEEECTTTC-----CEE-EEEEC-------CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTC---
T ss_pred EEEEECCCCCCceEEEEECCCC-----cEE-EEEec-------CCccceeEEEEeCCEEEEEEeeCCEEEEEECccC---
Confidence 444 444445 8999998762 111 11111 1123333333445535555667899999998762
Q ss_pred CCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccC-----
Q 009715 247 DSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYY----- 321 (528)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~----- 321 (528)
+.+..+... . ....+++|+..|+.+..+..|.++|.++.+.+..+....
T Consensus 118 -----------------------~~~~ti~~~-~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~ 171 (262)
T 3nol_A 118 -----------------------RQVRSFNYD-G--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEEL 171 (262)
T ss_dssp -----------------------CEEEEEECS-S--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEEC
T ss_pred -----------------------cEEEEEECC-C--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccc
Confidence 222222221 1 112333567777777767889999999988877654321
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecC------------CCCeEEEEEec
Q 009715 322 GALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGH------------NSWVSGVAFDS 373 (528)
Q Consensus 322 ~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h------------~~~V~~v~f~p 373 (528)
..++.+.|. +|++.+..-.++.|.+.|.++++.+.++.-. ..-.+.|+|+|
T Consensus 172 ~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp 234 (262)
T 3nol_A 172 PELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDK 234 (262)
T ss_dssp CCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEET
T ss_pred cccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcC
Confidence 345667887 7876666657889999999999998887631 13568999999
No 254
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.28 E-value=0.00059 Score=65.26 Aligned_cols=154 Identities=14% Similarity=0.092 Sum_probs=93.3
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
.....++|++++. ++++-..++.|..||... .. ...+. -...+..+++.++
T Consensus 32 ~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g--~~-------------------------~~~~~-~~~~p~gia~~~d 82 (306)
T 2p4o_A 32 TFLENLASAPDGT-IFVTNHEVGEIVSITPDG--NQ-------------------------QIHAT-VEGKVSGLAFTSN 82 (306)
T ss_dssp CCEEEEEECTTSC-EEEEETTTTEEEEECTTC--CE-------------------------EEEEE-CSSEEEEEEECTT
T ss_pred CCcceEEECCCCC-EEEEeCCCCeEEEECCCC--ce-------------------------EEEEe-CCCCceeEEEcCC
Confidence 4567899999988 777777889998888652 10 11111 1245789999999
Q ss_pred CCEEEEEeCC-C-cEEEEecCCceEEeeecc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE-EEEee------
Q 009715 291 GTYLATVGRD-G-YLRVFDYSKEQLICGGKS-YYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKV-VAWGE------ 360 (528)
Q Consensus 291 g~~l~s~~~d-g-~i~vwd~~~~~~~~~~~~-~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~-~~~~~------ 360 (528)
|+++++.... + .|..+|..+++....... .......++..+++..+++-..++.|.++|...++. +....
T Consensus 83 G~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~ 162 (306)
T 2p4o_A 83 GDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARS 162 (306)
T ss_dssp SCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCS
T ss_pred CcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccc
Confidence 9966655432 2 477778777765432221 122234455555555555554688999999876532 21111
Q ss_pred ---cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC
Q 009715 361 ---GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 361 ---~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~ 407 (528)
..-...+.+ +| |++ .++++-...++|..||+..
T Consensus 163 ~~~~~~~~pngi--s~-------dg~-----~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 163 NSESVFPAANGL--KR-------FGN-----FLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp STTCCSCSEEEE--EE-------ETT-----EEEEEETTTTEEEEEEBCT
T ss_pred cccCCCCcCCCc--Cc-------CCC-----EEEEEeCCCCEEEEEEeCC
Confidence 111234555 66 652 4566667778899988764
No 255
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.23 E-value=0.00051 Score=66.15 Aligned_cols=110 Identities=7% Similarity=-0.068 Sum_probs=73.8
Q ss_pred CeEEEEECCCCCEEEEE-eCCCcEEEEecCCc---eEEeeecccCCCeEEEEEcCCCCEEEEEeC----------CCcEE
Q 009715 281 SINSIAFSTDGTYLATV-GRDGYLRVFDYSKE---QLICGGKSYYGALLCCAWSMDGKYILTGGE----------DDLVQ 346 (528)
Q Consensus 281 ~v~~l~~spdg~~l~s~-~~dg~i~vwd~~~~---~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~----------dg~v~ 346 (528)
....|+|+|++++|+.+ ..++.|.+|++... +. ..+....+ ...+++.++|++.++... .+.|.
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~-~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~ 263 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTA-EVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGI 263 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCE-EEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEE
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCcc-ceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEE
Confidence 45679999999876666 45688999998742 21 11111223 678999999987666544 46688
Q ss_pred EEECCCCeEEEEeecC----CCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC
Q 009715 347 VWSMEDRKVVAWGEGH----NSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 347 vwd~~~~~~~~~~~~h----~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~ 407 (528)
.+|.. ++.+..+... -..+..+++ . +| .++++....+.|..+++..
T Consensus 264 ~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~-------~g------~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 264 KFDEF-GNILEVIPLPPPFAGEHFEQIQE-H-------DG------LLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EECTT-SCEEEEEECCTTTTTSCCCEEEE-E-------TT------EEEEECSSCSEEEEEEC--
T ss_pred EECCC-CCEEEEEECCCCCccccceEEEE-e-------CC------EEEEeecCCCceEEEeccc
Confidence 88864 7766666533 245677776 3 66 6777777788999998764
No 256
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.22 E-value=0.00058 Score=71.64 Aligned_cols=167 Identities=13% Similarity=0.013 Sum_probs=101.7
Q ss_pred EEEECCCCCEEEEEeCC----------------CcEEEEecCCceEEeeecccC----------CCeEEEEEc-CCC---
Q 009715 284 SIAFSTDGTYLATVGRD----------------GYLRVFDYSKEQLICGGKSYY----------GALLCCAWS-MDG--- 333 (528)
Q Consensus 284 ~l~~spdg~~l~s~~~d----------------g~i~vwd~~~~~~~~~~~~~~----------~~v~~l~~s-p~g--- 333 (528)
.+++.++..+++.+..+ ..|..+|.++++.+..+.... .++. +... .+|
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~ 323 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKAR 323 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEE
Confidence 35566766777777655 379999999999887654321 1221 2222 567
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEeecCC-------------CCe--------------------------EEEEEecC
Q 009715 334 KYILTGGEDDLVQVWSMEDRKVVAWGEGHN-------------SWV--------------------------SGVAFDSY 374 (528)
Q Consensus 334 ~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~-------------~~V--------------------------~~v~f~p~ 374 (528)
+.++.++.+|.++++|.++++.+....-.. .++ ..++|+|
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp- 402 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDP- 402 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-
T ss_pred EEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCC-
Confidence 467778899999999999999876654111 011 1234444
Q ss_pred CCCCCCCCCc----------------------cce---eEEEEE--Ee------CCCeEEEEEccCCeEEEEeecCCCCC
Q 009715 375 WSQPNSDGTA----------------------ETV---MYRFGS--VG------QDTRLLLWDLEMDEIVVPLRRGPLGG 421 (528)
Q Consensus 375 ~~~~~~dg~~----------------------~~~---~~~l~s--~s------~D~~i~lwd~~~~~~~~~~~~~~~~~ 421 (528)
+... ... ...+.. .+ .++.|..||+.+++.+.......+..
T Consensus 403 ------~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~ 476 (599)
T 1w6s_A 403 ------KRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVW 476 (599)
T ss_dssp ------TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCC
T ss_pred ------CCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCcc
Confidence 2200 000 000111 01 45789999999999988876532221
Q ss_pred CCeecCCCCCccCCceeeeecCCCCceeeecCCCCceEEeecC
Q 009715 422 SPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVH 464 (528)
Q Consensus 422 ~~~~s~~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h 464 (528)
.-. ...-...+.+++.++.++.+|.++++.+-.++..
T Consensus 477 ~g~------~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 477 GGT------MATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp SBC------EEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred Ccc------eEecCCEEEEECCCCeEEEEECCCCCEEEEeeCC
Confidence 111 1112345566888889999999999988777644
No 257
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.22 E-value=0.00074 Score=61.57 Aligned_cols=159 Identities=9% Similarity=0.019 Sum_probs=106.5
Q ss_pred CceeEEEEeeCCCcEEEEEeCCc--eEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCe--EEEE
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADG--NLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSI--NSIA 286 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v--~~l~ 286 (528)
.-...+.|++ +. ++.+.+.+| .|+++|+.++. ... ..... ... -.++
T Consensus 21 ~ftqGL~~~~-~~-LyestG~~g~S~v~~vD~~tgk-v~~-------------------------~~~l~-~~~fgeGi~ 71 (243)
T 3mbr_X 21 AFTEGLFYLR-GH-LYESTGETGRSSVRKVDLETGR-ILQ-------------------------RAEVP-PPYFGAGIV 71 (243)
T ss_dssp CCEEEEEEET-TE-EEEEECCTTSCEEEEEETTTCC-EEE-------------------------EEECC-TTCCEEEEE
T ss_pred cccccEEEEC-CE-EEEECCCCCCceEEEEECCCCC-EEE-------------------------EEeCC-CCcceeEEE
Confidence 4567899986 44 666666654 89999998732 111 11110 111 2233
Q ss_pred ECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCC---
Q 009715 287 FSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHN--- 363 (528)
Q Consensus 287 ~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~--- 363 (528)
+. .++..+..-.++.+.+||.++.+.+..+.. ...-..++ ++++.|+.+..++.|.++|.++.+.+.++.-..
T Consensus 72 ~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~-~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~ 147 (243)
T 3mbr_X 72 AW-RDRLIQLTWRNHEGFVYDLATLTPRARFRY-PGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGR 147 (243)
T ss_dssp EE-TTEEEEEESSSSEEEEEETTTTEEEEEEEC-SSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTE
T ss_pred Ee-CCEEEEEEeeCCEEEEEECCcCcEEEEEeC-CCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCc
Confidence 33 233344445788999999999999988763 23333444 567777777778999999999998887776321
Q ss_pred --CCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 364 --SWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 364 --~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
..++.+.|. +| .+++..-.+..|.+.|.++++.+..+..
T Consensus 148 ~~~~lNeLe~~--------~G------~lyanvw~s~~I~vIDp~tG~V~~~idl 188 (243)
T 3mbr_X 148 PLDNLNELEWV--------NG------ELLANVWLTSRIARIDPASGKVVAWIDL 188 (243)
T ss_dssp ECCCEEEEEEE--------TT------EEEEEETTTTEEEEECTTTCBEEEEEEC
T ss_pred ccccceeeEEe--------CC------EEEEEECCCCeEEEEECCCCCEEEEEEC
Confidence 346677775 66 5666665788999999999999888764
No 258
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.22 E-value=0.002 Score=67.55 Aligned_cols=77 Identities=14% Similarity=0.019 Sum_probs=54.7
Q ss_pred EEEECCCCCEEEEEeC--------------------C----CcEEEEecCCceEEeeecc--cC--------CCeEEEEE
Q 009715 284 SIAFSTDGTYLATVGR--------------------D----GYLRVFDYSKEQLICGGKS--YY--------GALLCCAW 329 (528)
Q Consensus 284 ~l~~spdg~~l~s~~~--------------------d----g~i~vwd~~~~~~~~~~~~--~~--------~~v~~l~~ 329 (528)
.+++.|+..+++.+.. | +.|..+|.++|+.+..+.. |. .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 4677777777776663 2 5799999999999877642 21 1221 222
Q ss_pred c-CCCC---EEEEEeCCCcEEEEECCCCeEEEEeec
Q 009715 330 S-MDGK---YILTGGEDDLVQVWSMEDRKVVAWGEG 361 (528)
Q Consensus 330 s-p~g~---~l~sg~~dg~v~vwd~~~~~~~~~~~~ 361 (528)
. .+|+ .++.++.+|.++++|.++++.+..+..
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 2 4674 788899999999999999998876653
No 259
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.20 E-value=0.00037 Score=72.97 Aligned_cols=116 Identities=14% Similarity=0.105 Sum_probs=80.4
Q ss_pred CCCC---EEEEEeCCCcEEEEecCCceEEeeecccC-------------CCe--------------------------EE
Q 009715 289 TDGT---YLATVGRDGYLRVFDYSKEQLICGGKSYY-------------GAL--------------------------LC 326 (528)
Q Consensus 289 pdg~---~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-------------~~v--------------------------~~ 326 (528)
.+|+ .++.++.+|.+.++|.++++.+....... .++ ..
T Consensus 311 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 390 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGV 390 (571)
T ss_dssp ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCC
Confidence 4674 57778899999999999999876543211 011 23
Q ss_pred EEEcCCCCEEEEEe-------------------------------------CCCcEEEEECCCCeEEEEeecCCCCeEEE
Q 009715 327 CAWSMDGKYILTGG-------------------------------------EDDLVQVWSMEDRKVVAWGEGHNSWVSGV 369 (528)
Q Consensus 327 l~~sp~g~~l~sg~-------------------------------------~dg~v~vwd~~~~~~~~~~~~h~~~V~~v 369 (528)
++++|+..++++.. .++.|..||+.+++.+.++.. ...+...
T Consensus 391 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~-~~~~~~~ 469 (571)
T 2ad6_A 391 DSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE-KFAAWGG 469 (571)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEE-SSCCCSB
T ss_pred ceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecC-CCCccce
Confidence 57788777766643 357899999999998877652 2222222
Q ss_pred EEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCC
Q 009715 370 AFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGP 418 (528)
Q Consensus 370 ~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~ 418 (528)
.+.. .++ +++.++.|+.|+.||.++++.+..+....
T Consensus 470 ~~~t------~gg-------~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 470 TLYT------KGG-------LVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp CEEE------TTT-------EEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred eEEE------CCC-------EEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 2222 044 56678999999999999999999887644
No 260
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.20 E-value=0.00078 Score=64.85 Aligned_cols=174 Identities=14% Similarity=0.080 Sum_probs=100.5
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC-C
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST-D 290 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-d 290 (528)
...+++|++++. +++++..++.|..|+..... ...+........ .... .......+......+..+++.+ +
T Consensus 20 ~p~~i~~d~~g~-~l~v~~~~~~i~~~~~~~~~--~~~~~~~~~~~~--~~~~---~g~~~~~~~~~~~~p~gi~~~~~~ 91 (322)
T 2fp8_A 20 APNSFTFDSTNK-GFYTSVQDGRVIKYEGPNSG--FVDFAYASPYWN--KAFC---ENSTDAEKRPLCGRTYDISYNLQN 91 (322)
T ss_dssp CCCCEECCTTCS-SEEEECTTSEEEEECCTTTC--EEEEEESCTTCC--HHHH---TTCCCGGGHHHHCCEEEEEEETTT
T ss_pred CceEEEEcCCCC-EEEEEcCCCeEEEECCCCCc--eEEEeccccccc--cccc---ccccchhccccCCCCceEEEcCCC
Confidence 456789999987 78889899999999875311 111100000000 0000 0000000000013578899998 5
Q ss_pred CCEEEEEeCCCcEEEEecCCceEEeeec---c-cCCCeEEEEEcC-CCCEEEEEeC-----------------CCcEEEE
Q 009715 291 GTYLATVGRDGYLRVFDYSKEQLICGGK---S-YYGALLCCAWSM-DGKYILTGGE-----------------DDLVQVW 348 (528)
Q Consensus 291 g~~l~s~~~dg~i~vwd~~~~~~~~~~~---~-~~~~v~~l~~sp-~g~~l~sg~~-----------------dg~v~vw 348 (528)
++ |+++...+.|..+|..+++...... + .......+++.+ +|++.++-.. ++.|..|
T Consensus 92 g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 92 NQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp TE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred Cc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 54 5555555568889987654321111 1 123467899999 9987666432 3678889
Q ss_pred ECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC
Q 009715 349 SMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 349 d~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~ 407 (528)
|..+++...... .-...+.|+|+| ||+ .++++-...+.|..||+..
T Consensus 171 d~~~~~~~~~~~-~~~~p~gia~~~-------dg~-----~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 171 DPSTKETTLLLK-ELHVPGGAEVSA-------DSS-----FVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp ETTTTEEEEEEE-EESCCCEEEECT-------TSS-----EEEEEEGGGTEEEEEESSS
T ss_pred eCCCCEEEEecc-CCccCcceEECC-------CCC-----EEEEEeCCCCeEEEEECCC
Confidence 987776433222 223456799999 872 2455556778999999875
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.19 E-value=0.0016 Score=68.37 Aligned_cols=108 Identities=13% Similarity=0.089 Sum_probs=71.9
Q ss_pred CCCcEEEEecCCceEEeeecccCCC-------------------------------------e-EEEEEcCCCCEEEEEe
Q 009715 299 RDGYLRVFDYSKEQLICGGKSYYGA-------------------------------------L-LCCAWSMDGKYILTGG 340 (528)
Q Consensus 299 ~dg~i~vwd~~~~~~~~~~~~~~~~-------------------------------------v-~~l~~sp~g~~l~sg~ 340 (528)
.++.|+.+|.++|+.+..+...... + ..+++.+...++..+.
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~ 259 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT 259 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC
Confidence 3799999999999988765432110 0 1345566667777776
Q ss_pred CC----------------CcEEEEECCCCeEEEEeec--CCCC----e---EEEEEe-cCCCCCCCCCCccceeEEEEEE
Q 009715 341 ED----------------DLVQVWSMEDRKVVAWGEG--HNSW----V---SGVAFD-SYWSQPNSDGTAETVMYRFGSV 394 (528)
Q Consensus 341 ~d----------------g~v~vwd~~~~~~~~~~~~--h~~~----V---~~v~f~-p~~~~~~~dg~~~~~~~~l~s~ 394 (528)
.+ +.|.-+|.++++.+..++. |..+ + .-+... . +|+ ....++.+
T Consensus 260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~-------~G~---~~~~v~~~ 329 (599)
T 1w6s_A 260 GNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDK-------DGK---ARKLLTHP 329 (599)
T ss_dssp CCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECT-------TSC---EEEEEEEE
T ss_pred CCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEecccc-------CCc---EEEEEEEE
Confidence 55 3799999999998877663 3221 0 111221 2 451 11367778
Q ss_pred eCCCeEEEEEccCCeEEEEeec
Q 009715 395 GQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 395 s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
+.+|.+.+.|.++++.+.....
T Consensus 330 ~~~G~l~~lD~~tG~~lw~~~~ 351 (599)
T 1w6s_A 330 DRNGIVYTLDRTDGALVSANKL 351 (599)
T ss_dssp CTTSEEEEEETTTCCEEEEEES
T ss_pred CCCcEEEEEECCCCCEeecccc
Confidence 8999999999999999887664
No 262
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.18 E-value=6.3e-05 Score=69.28 Aligned_cols=116 Identities=14% Similarity=0.125 Sum_probs=81.2
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeE--EEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q 009715 281 SINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALL--CCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAW 358 (528)
Q Consensus 281 ~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~--~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~ 358 (528)
....+.|+ ++.++.+.+.+|.|+++|+++++.+..+ ...... .+++.. +++.+..-.++.+.+||.++.+.+.+
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEE
Confidence 34688887 3566777778889999999999887766 223333 355543 23444455689999999999999998
Q ss_pred eecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 359 GEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 359 ~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
+.. ...-..+++ || ..|+....+++|.++|..+.+.+..+..
T Consensus 132 i~~-~~eGwGLt~---------Dg------~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 132 TRY-SGEGWGLCY---------WN------GKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp EEC-SSCCCCEEE---------ET------TEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EeC-CCceeEEec---------CC------CEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 873 232345554 55 2444444588999999999988877654
No 263
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.14 E-value=0.00011 Score=78.71 Aligned_cols=154 Identities=14% Similarity=0.082 Sum_probs=83.9
Q ss_pred CCCeEEEEecCC-----------cEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEe-CCce
Q 009715 167 DGHDLLIGLNSG-----------DVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGH-ADGN 234 (528)
Q Consensus 167 ~~~~l~~g~~~G-----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~-~dg~ 234 (528)
+++.++.|+.+. .+.+||+.+..+..... ... .+...+.++++..++. +++.|+ .+..
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~------~~~---~~~~~~~~~~~~~~g~-lyv~GG~~~~~ 266 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV------TVT---KHDMFCPGISMDGNGQ-IVVTGGNDAKK 266 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE------EEC---SCCCSSCEEEECTTSC-EEEECSSSTTC
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc------cCC---CCCCccccccCCCCCC-EEEeCCCCCCc
Confidence 677777776542 57888887643221110 100 1333455678888998 888887 4558
Q ss_pred EEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEe-CC-----CcEEEEec
Q 009715 235 LYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVG-RD-----GYLRVFDY 308 (528)
Q Consensus 235 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~-~d-----g~i~vwd~ 308 (528)
+.+||..++. ....+... . ...-.++++.+++++++.|+ .+ ..+.+||.
T Consensus 267 v~~yd~~t~~--W~~~~~~~-----------------~------~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 267 TSLYDSSSDS--WIPGPDMQ-----------------V------ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp EEEEEGGGTE--EEECCCCS-----------------S------CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred eEEecCcCCc--eeECCCCC-----------------c------cccccceEEecCCeEEEEeCcccCCcccccceEeCC
Confidence 9999987521 00000000 0 01112456667899999988 34 46899999
Q ss_pred CCceEEeee----cccCCCeEEEEEcCCCCEEEEEeCCC---------cEEEEECCCCeE
Q 009715 309 SKEQLICGG----KSYYGALLCCAWSMDGKYILTGGEDD---------LVQVWSMEDRKV 355 (528)
Q Consensus 309 ~~~~~~~~~----~~~~~~v~~l~~sp~g~~l~sg~~dg---------~v~vwd~~~~~~ 355 (528)
.+.+-...- ......-....+..+++.++.|+.|+ .+..||..+...
T Consensus 322 ~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w 381 (656)
T 1k3i_A 322 SSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD 381 (656)
T ss_dssp TTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE
T ss_pred CCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcce
Confidence 887643320 00000000012234555555555443 567888877653
No 264
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.11 E-value=0.0036 Score=65.55 Aligned_cols=65 Identities=12% Similarity=0.120 Sum_probs=44.5
Q ss_pred CcEEEEECCCCeEEEEeec--CCCC----eEE-EEEe---cCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEE
Q 009715 343 DLVQVWSMEDRKVVAWGEG--HNSW----VSG-VAFD---SYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVV 412 (528)
Q Consensus 343 g~v~vwd~~~~~~~~~~~~--h~~~----V~~-v~f~---p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~ 412 (528)
+.|.-+|.++++.+..++. |..+ +.. +.+. . +|+ ....++.++.+|.+.++|.++++.+.
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~-------~G~---~~~~v~~~~~~G~l~~lD~~tG~~lw 360 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAK-------DGK---IVKATAHADRNGFFYVVDRSNGKLQN 360 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECS-------SSC---EEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecC-------CCC---EEEEEEEECCCceEEEEECCCCCEec
Confidence 5799999999999877652 3321 111 1121 2 451 11368889999999999999999988
Q ss_pred EeecC
Q 009715 413 PLRRG 417 (528)
Q Consensus 413 ~~~~~ 417 (528)
.+...
T Consensus 361 ~~~~~ 365 (582)
T 1flg_A 361 AFPFV 365 (582)
T ss_dssp EEESS
T ss_pred ccccc
Confidence 77653
No 265
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.06 E-value=0.00091 Score=60.97 Aligned_cols=118 Identities=10% Similarity=0.011 Sum_probs=80.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCC--cEEEEecCCceEEeeecccCCCe--EEEEEcCCCCEEEEEeCCCcEEEEECCCCeE
Q 009715 280 GSINSIAFSTDGTYLATVGRDG--YLRVFDYSKEQLICGGKSYYGAL--LCCAWSMDGKYILTGGEDDLVQVWSMEDRKV 355 (528)
Q Consensus 280 ~~v~~l~~spdg~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~v--~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~ 355 (528)
.-...+.|+. +.++.+.+.+| .|+++|+++++.+..+.-. ... ..++.. .+++....-.++.+.+||.++.+.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcE
Confidence 4466899986 55555556554 8999999999998876532 222 234443 233444455689999999999999
Q ss_pred EEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 356 VAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 356 ~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
+.++..- ..=..+++ |+. .+++| ..+++|.++|..+.+.+..+..
T Consensus 98 ~~ti~~~-~~Gwglt~---------dg~-----~L~vS-dgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 98 RARFRYP-GEGWALTS---------DDS-----HLYMS-DGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EEEEECS-SCCCEEEE---------CSS-----CEEEE-CSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEeCC-CCceEEee---------CCC-----EEEEE-CCCCeEEEEeCCCCeEEEEEEE
Confidence 9988732 22245554 551 34445 4588999999999988877754
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.06 E-value=0.0052 Score=60.83 Aligned_cols=159 Identities=10% Similarity=-0.042 Sum_probs=100.0
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
..+..++|++.+..++++-...+.|+.+++.... .. ............+++.+.
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~--~~------------------------~~~~~~~~~p~glavd~~ 169 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSN--VE------------------------EVVSTGLESPGGLAVDWV 169 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC--EE------------------------EEECSSCSCCCCEEEETT
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC--cE------------------------EEEeCCCCCccEEEEEeC
Confidence 3578999998766466666677889989876421 00 000111134567888875
Q ss_pred CCEE-EEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeC-C-CcEEEEECCCCeEEEEeecCCCCeE
Q 009715 291 GTYL-ATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE-D-DLVQVWSMEDRKVVAWGEGHNSWVS 367 (528)
Q Consensus 291 g~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~-d-g~v~vwd~~~~~~~~~~~~h~~~V~ 367 (528)
+..| ++-...+.|.+.+++.......+.........|++.|.+.+|..... + +.|..++++...........-...+
T Consensus 170 ~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~Pn 249 (386)
T 3v65_B 170 HDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPN 249 (386)
T ss_dssp TTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEE
T ss_pred CCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCee
Confidence 4444 44455678888888744333333333356789999997666655543 4 6888888875433333333445688
Q ss_pred EEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC
Q 009715 368 GVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 368 ~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~ 407 (528)
.|+|+| ++. .++++-...+.|..+|+..
T Consensus 250 Glavd~-------~~~-----~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 250 GLTIDY-------AGR-----RMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEEEG-------GGT-----EEEEEETTTTEEEEECTTS
T ss_pred eEEEeC-------CCC-----EEEEEECCCCEEEEEeCCC
Confidence 999997 441 5666667778898888764
No 267
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.05 E-value=0.0021 Score=59.38 Aligned_cols=207 Identities=12% Similarity=0.124 Sum_probs=127.7
Q ss_pred CCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC
Q 009715 210 NSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST 289 (528)
Q Consensus 210 ~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 289 (528)
...+..++|+|++..++++...++.|...|.. +.....++. . -....-.|++.+
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~--g~v~~~i~l-----------------------~-g~~D~EGIa~~~ 79 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN--GDLIRTIPL-----------------------D-FVKDLETIEYIG 79 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT--CCEEEEEEC-----------------------S-SCSSEEEEEECS
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC--CCEEEEEec-----------------------C-CCCChHHeEEeC
Confidence 34699999999877566678888888888876 322222111 0 014566889988
Q ss_pred CCCEEEEEeCCCcEEEEecCCceE---Eeeec------ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC---CeEEE
Q 009715 290 DGTYLATVGRDGYLRVFDYSKEQL---ICGGK------SYYGALLCCAWSMDGKYILTGGEDDLVQVWSMED---RKVVA 357 (528)
Q Consensus 290 dg~~l~s~~~dg~i~vwd~~~~~~---~~~~~------~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~---~~~~~ 357 (528)
++.++++.-.++.+.++++..... +.... ........|+|+|.++.|.++.+.....||.++. ...+.
T Consensus 80 ~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~ 159 (255)
T 3qqz_A 80 DNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELH 159 (255)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCE
T ss_pred CCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCcee
Confidence 887767666778899998764331 12211 1234568999999998777777766656666541 11122
Q ss_pred Eee-------cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCC
Q 009715 358 WGE-------GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQ 430 (528)
Q Consensus 358 ~~~-------~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~ 430 (528)
.+. .+...+.+++|+|. .| .+++.......|..+|.. ++.+..+........
T Consensus 160 i~~~~~~~~~~~~~d~S~l~~dp~------tg------~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~-------- 218 (255)
T 3qqz_A 160 ISKDKALQRQFTLDDVSGAEFNQQ------KN------TLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRG-------- 218 (255)
T ss_dssp EEECHHHHHTCCSSCCCEEEEETT------TT------EEEEEETTTTEEEEECTT-CCEEEEEECSTTGGG--------
T ss_pred eecchhhccccccCCceeEEEcCC------CC------eEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCC--------
Confidence 221 13346789999982 44 677777788899999966 445444432100000
Q ss_pred CccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe-EEEEECCCeEEEEeCC
Q 009715 431 SAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES-VLTVCREGHIKIWMRP 493 (528)
Q Consensus 431 ~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-l~t~s~Dg~i~iW~~~ 493 (528)
+..--..-..|+|.+++ |...+.-+.++++...
T Consensus 219 ------------------------------l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~~ 252 (255)
T 3qqz_A 219 ------------------------------LSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQ 252 (255)
T ss_dssp ------------------------------CSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC-
T ss_pred ------------------------------cccccCCCCeeEECCCCCEEEEcCCceEEEEEec
Confidence 00001235789999986 7777877777766543
No 268
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.03 E-value=0.012 Score=57.31 Aligned_cols=160 Identities=10% Similarity=-0.027 Sum_probs=100.6
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
..+..++|++....++++-...+.|+.+++..... . ............+++.+.
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~--~------------------------~~~~~~~~~p~glavd~~ 126 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV--E------------------------EVVSTGLESPGGLAVDWV 126 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--E------------------------EEECSSCSCCCEEEEETT
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCc--e------------------------EEEeCCCCCccEEEEecC
Confidence 35789999987664566666778899888764210 0 001111134568899875
Q ss_pred CCEE-EEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEe-CC-CcEEEEECCCCeEEEEeecCCCCeE
Q 009715 291 GTYL-ATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGG-ED-DLVQVWSMEDRKVVAWGEGHNSWVS 367 (528)
Q Consensus 291 g~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~-~d-g~v~vwd~~~~~~~~~~~~h~~~V~ 367 (528)
+..| ++-...+.|.+.+++.......+.........++++|.+..|.... .+ +.|..++++.......+...-...+
T Consensus 127 ~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~Pn 206 (349)
T 3v64_C 127 HDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPN 206 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEE
T ss_pred CCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcc
Confidence 4444 5555667899999875433322333335578999999666555443 44 7898898875433222233345688
Q ss_pred EEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCC
Q 009715 368 GVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMD 408 (528)
Q Consensus 368 ~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~ 408 (528)
.|+++| ++. .++++-...+.|..+|+...
T Consensus 207 Gla~d~-------~~~-----~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 207 GLTIDY-------AGR-----RMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp EEEEET-------TTT-----EEEEEETTTTEEEEEETTSC
T ss_pred eEEEeC-------CCC-----EEEEEECCCCEEEEEeCCCC
Confidence 999997 442 56666677788999998653
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.03 E-value=0.0021 Score=63.70 Aligned_cols=165 Identities=5% Similarity=-0.142 Sum_probs=103.4
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG 291 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg 291 (528)
....+++.+.+.+++++-...+.|.+.+++. .... ......-.....|++.|.+
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg--~~~~------------------------~l~~~~l~~P~giavdp~~ 213 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDG--AHRK------------------------VLLWQSLEKPRAIALHPME 213 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTS--CSCE------------------------EEECSSCSCEEEEEEETTT
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCC--CceE------------------------EeecCCCCCCcEEEEEcCC
Confidence 4567889886664666666677888877652 1111 1111112467899999966
Q ss_pred CEEEEEe-CC-CcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeEEEEeecCCCCeEE
Q 009715 292 TYLATVG-RD-GYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG-GEDDLVQVWSMEDRKVVAWGEGHNSWVSG 368 (528)
Q Consensus 292 ~~l~s~~-~d-g~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg-~~dg~v~vwd~~~~~~~~~~~~h~~~V~~ 368 (528)
..|+... .. +.|..++++.................|+|+|++..|..+ ...+.|..+|++.......+.........
T Consensus 214 g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~g 293 (386)
T 3v65_B 214 GTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFA 293 (386)
T ss_dssp TEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEE
T ss_pred CeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceE
Confidence 6555554 34 678888887433222222223456889999876666555 44678999998754333333333456678
Q ss_pred EEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 369 VAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 369 v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
|++. ++ .++++....+.|..+|..+++.+..+..
T Consensus 294 iav~--------~~------~ly~td~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 294 ITVF--------ED------SLYWTDWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp EEEE--------TT------EEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred EEEE--------CC------EEEEeeCCCCeEEEEECCCCcceEEEcc
Confidence 8884 44 5777877888999999777766666553
No 270
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.00 E-value=0.0046 Score=60.25 Aligned_cols=164 Identities=5% Similarity=-0.144 Sum_probs=103.7
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG 291 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg 291 (528)
....+++.+.+.+++++-...+.|.+.+++. .... ......-.....|++.|.+
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG--~~~~------------------------~l~~~~l~~P~~iavdp~~ 170 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDG--AHRK------------------------VLLWQSLEKPRAIALHPME 170 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTS--CSCE------------------------EEECTTCSCEEEEEEETTT
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCC--CceE------------------------EEEeCCCCCcceEEEecCc
Confidence 4578999986664666666778899998763 1111 0111112457899999965
Q ss_pred CEEEEEe-CC-CcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeEEEEeecCCCCeEE
Q 009715 292 TYLATVG-RD-GYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG-GEDDLVQVWSMEDRKVVAWGEGHNSWVSG 368 (528)
Q Consensus 292 ~~l~s~~-~d-g~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg-~~dg~v~vwd~~~~~~~~~~~~h~~~V~~ 368 (528)
..|+... .. +.|..++++.................|+++|++..|..+ ...+.|..+|++.......+.........
T Consensus 171 g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~g 250 (349)
T 3v64_C 171 GTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFA 250 (349)
T ss_dssp TEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEE
T ss_pred CeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceE
Confidence 5555443 44 778888887433222222223456889999877666655 44678999998754333333333456677
Q ss_pred EEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEee
Q 009715 369 VAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLR 415 (528)
Q Consensus 369 v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 415 (528)
+++. ++ .++++-...+.|..+|..+++.+..+.
T Consensus 251 iav~--------~~------~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 251 ITVF--------ED------SLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EEEE--------TT------EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEE--------CC------EEEEecCCCCeEEEEEccCCCccEEec
Confidence 8874 45 577777788899998876776655554
No 271
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.97 E-value=0.014 Score=55.84 Aligned_cols=165 Identities=5% Similarity=-0.137 Sum_probs=103.8
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG 291 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg 291 (528)
....+++.+.+.+++++-...+.|.++++.. .... ............+++.|.+
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g--~~~~------------------------~~~~~~~~~P~~iavdp~~ 131 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKG--VKRK------------------------TLFRENGSKPRAIVVDPVH 131 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTS--SSEE------------------------EEEECTTCCEEEEEEETTT
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCC--CceE------------------------EEEECCCCCcceEEeCCCC
Confidence 4578999876654666667788999998763 1100 0111122467899999966
Q ss_pred CEEEEEeC-C-CcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEee--cCCCCe
Q 009715 292 TYLATVGR-D-GYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGG-EDDLVQVWSMEDRKVVAWGE--GHNSWV 366 (528)
Q Consensus 292 ~~l~s~~~-d-g~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~-~dg~v~vwd~~~~~~~~~~~--~h~~~V 366 (528)
..|+.+.. . +.|..++++.................|+++|++..|..+. ..+.|..+|++......... ..-...
T Consensus 132 g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P 211 (316)
T 1ijq_A 132 GFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHP 211 (316)
T ss_dssp TEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSE
T ss_pred CEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCc
Confidence 65555543 2 6788888863322222222234578899999877666554 56789999987432211122 123456
Q ss_pred EEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 367 SGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 367 ~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
..+++. ++ .++++....+.|..+|..+++.+..+..
T Consensus 212 ~giav~--------~~------~ly~~d~~~~~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 212 FSLAVF--------ED------KVFWTDIINEAIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp EEEEEE--------TT------EEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred EEEEEE--------CC------EEEEEECCCCeEEEEeCCCCcceEEEec
Confidence 778875 44 5777777888999999877776665543
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.96 E-value=0.015 Score=55.70 Aligned_cols=164 Identities=5% Similarity=-0.090 Sum_probs=100.5
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
.....++|++.+..++++-..++.|+.+++....... .....+...-.....+++.+.
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~----------------------~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS----------------------SYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC------------------------------CEEEECSSCSCCCEEEEETT
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCc----------------------ccEEEEeCCCCCcCEEEEeec
Confidence 4578999998776466666677899999876410000 000011111134568899875
Q ss_pred CCEE-EEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCC--CcEEEEECCCCeEEEEeecCCCCeE
Q 009715 291 GTYL-ATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGED--DLVQVWSMEDRKVVAWGEGHNSWVS 367 (528)
Q Consensus 291 g~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~d--g~v~vwd~~~~~~~~~~~~h~~~V~ 367 (528)
+..| ++-...+.|.+++++.......+.........++++|.+.+|...... +.|..++++...........-...+
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~ 167 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 167 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCce
Confidence 4444 444567889999987544333333233567899999976666555443 6888888864322222222345788
Q ss_pred EEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCC
Q 009715 368 GVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMD 408 (528)
Q Consensus 368 ~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~ 408 (528)
.|+++| ++. .++++-...+.|..+|+...
T Consensus 168 gla~d~-------~~~-----~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 168 GITLDL-------LSG-----RLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp EEEEET-------TTT-----EEEEEETTTTEEEEEETTSC
T ss_pred EEEEec-------cCC-----EEEEEECCCCeEEEEecCCC
Confidence 999998 542 56666667789999998743
No 273
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.95 E-value=0.015 Score=55.70 Aligned_cols=160 Identities=9% Similarity=-0.048 Sum_probs=101.1
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC-
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD- 290 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd- 290 (528)
.+..++|++....++++-...+.|+.+++....... ......-.....+++.+.
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~-------------------------~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ-------------------------NVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC-------------------------EEEEECCSCCCEEEEETTT
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE-------------------------EEEcCCCCCccEEEEEcCC
Confidence 467899998766466666677889999876421100 011111235668889874
Q ss_pred CCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeEEEEeecCCCCeEE
Q 009715 291 GTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGG--EDDLVQVWSMEDRKVVAWGEGHNSWVSG 368 (528)
Q Consensus 291 g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~--~dg~v~vwd~~~~~~~~~~~~h~~~V~~ 368 (528)
++++++-...+.|.+++++.......+.........+++.|.+.+|.... ..+.|..++++.......+...-...+.
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Png 170 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNG 170 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEE
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccE
Confidence 44445555667899999874432222223345678999999766666555 2578888888643322222223456789
Q ss_pred EEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCC
Q 009715 369 VAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMD 408 (528)
Q Consensus 369 v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~ 408 (528)
|+++| ++. .++++-...+.|..+|+...
T Consensus 171 lavd~-------~~~-----~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 171 LTLDY-------EEQ-----KLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp EEEET-------TTT-----EEEEEETTTTEEEEEETTSC
T ss_pred EEEec-------cCC-----EEEEEECCCCEEEEEcCCCC
Confidence 99998 542 56666677889999998643
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.92 E-value=0.022 Score=56.48 Aligned_cols=166 Identities=6% Similarity=-0.094 Sum_probs=104.4
Q ss_pred CCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC
Q 009715 210 NSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST 289 (528)
Q Consensus 210 ~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 289 (528)
...+..|+|++.+..++++-...+.|+.+++...... ................+++.+
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~----------------------~~~~~~~~~~~~~p~glavD~ 168 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV----------------------SSYDTVISRDIQAPDGLAVDW 168 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC----------------------------CCCEEEECSSCSCEEEEEEET
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCC----------------------CcceEEEeCCCCCcccEEEEe
Confidence 3468899999876645556566788988887631100 001111111234677899988
Q ss_pred C-CCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeEEEEeecCCCCe
Q 009715 290 D-GTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE--DDLVQVWSMEDRKVVAWGEGHNSWV 366 (528)
Q Consensus 290 d-g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~--dg~v~vwd~~~~~~~~~~~~h~~~V 366 (528)
. ++++++-...+.|.+.+++.......+.........|++.|.+.+|..... .+.|...+++.......+...-.+.
T Consensus 169 ~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P 248 (400)
T 3p5b_L 169 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 248 (400)
T ss_dssp TTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCE
T ss_pred cCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCce
Confidence 4 444555556788999999855444334333455789999997666665542 4789999987544333333344678
Q ss_pred EEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCe
Q 009715 367 SGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDE 409 (528)
Q Consensus 367 ~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~ 409 (528)
+.|++++ ++. .++++-.....|..+|+....
T Consensus 249 ~glavd~-------~~~-----~lY~aD~~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 249 NGITLDL-------LSG-----RLYWVDSKLHSISSIDVNGGN 279 (400)
T ss_dssp EEEEEET-------TTT-----EEEEEETTTTEEEEEETTSCC
T ss_pred EEEEEEe-------CCC-----EEEEEECCCCEEEEEeCCCCc
Confidence 9999998 541 556666677889999986543
No 275
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.88 E-value=0.00076 Score=62.30 Aligned_cols=197 Identities=13% Similarity=0.160 Sum_probs=116.4
Q ss_pred CCCeEEEEECCCCCEE-EEEeCCCcEEEEecCCceEEeeecc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE-
Q 009715 279 QGSINSIAFSTDGTYL-ATVGRDGYLRVFDYSKEQLICGGKS-YYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKV- 355 (528)
Q Consensus 279 ~~~v~~l~~spdg~~l-~s~~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~- 355 (528)
...+..++|+|++..| ++...++.|...|.. ++.+..+.- -......|++.+++.++++.-.++.+.++++.....
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence 3679999999976644 457778899999998 877776532 225678899999998777765678899998865432
Q ss_pred --EEEee------cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecC
Q 009715 356 --VAWGE------GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFST 427 (528)
Q Consensus 356 --~~~~~------~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~ 427 (528)
+.... ........|+|+| ++ .+|.++.+.....+|.+. +. .. ...+...
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d~-------~~------~~L~va~E~~p~~i~~~~-g~-----~~---~~~l~i~- 161 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYSR-------QD------HTFWFFKEKNPIEVYKVN-GL-----LS---SNELHIS- 161 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEET-------TT------TEEEEEEESSSEEEEEEE-ST-----TC---SSCCEEE-
T ss_pred eeeeeeccccccccccCCcceEEEeC-------CC------CEEEEEECcCCceEEEEc-cc-----cc---CCceeee-
Confidence 22221 1344568999999 66 345555554445555554 10 00 0000000
Q ss_pred CCCCccCCceeeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe---EEEEECCCeEEEEeCCCCccccC----
Q 009715 428 GSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES---VLTVCREGHIKIWMRPGVAESQS---- 500 (528)
Q Consensus 428 ~~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~---l~t~s~Dg~i~iW~~~~~~~~~~---- 500 (528)
+.+. + .-..+...+.+++++|.. ++.......|.+.|..+......
T Consensus 162 -----------------------~~~~---~-~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~ 214 (255)
T 3qqz_A 162 -----------------------KDKA---L-QRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTK 214 (255)
T ss_dssp -----------------------ECHH---H-HHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECST
T ss_pred -----------------------cchh---h-ccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCC
Confidence 0000 0 000112346789999852 55555667788888776542111
Q ss_pred C--------CccceEEEccCCceEEEeeeeccccc
Q 009715 501 S--------SSETVLSTSSKDKPLLSSKVVTSSYR 527 (528)
Q Consensus 501 ~--------~~~~vl~~spd~~~l~s~~~~gs~~~ 527 (528)
+ .+..-++|.++|+ |..++..+..||
T Consensus 215 g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~ 248 (255)
T 3qqz_A 215 GSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYR 248 (255)
T ss_dssp TGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEE
T ss_pred ccCCcccccCCCCeeEECCCCC-EEEEcCCceEEE
Confidence 1 1222399999997 555565555553
No 276
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.86 E-value=0.0069 Score=58.12 Aligned_cols=165 Identities=6% Similarity=-0.063 Sum_probs=104.2
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG 291 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg 291 (528)
....+++.+.+.+++++-...+.|.+++++. .....+ ..........+++.|.+
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG--~~~~~l------------------------~~~~~~~P~giavdp~~ 133 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDG--SLRKVL------------------------FWQELDQPRAIALDPSS 133 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEE------------------------ECSSCSSEEEEEEEGGG
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCC--CcEEEE------------------------EeCCCCCccEEEEeCCC
Confidence 4667999876654666666778899998763 111110 11112457789999865
Q ss_pred CEEEEEe--CCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeEEEEeecCCCCeEE
Q 009715 292 TYLATVG--RDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG-GEDDLVQVWSMEDRKVVAWGEGHNSWVSG 368 (528)
Q Consensus 292 ~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg-~~dg~v~vwd~~~~~~~~~~~~h~~~V~~ 368 (528)
.+|+... ..+.|...+++...........-...+.|+|+|++..|..+ ...+.|..+|++.......+.+.......
T Consensus 134 g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~g 213 (318)
T 3sov_A 134 GFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFA 213 (318)
T ss_dssp TEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEE
T ss_pred CEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceE
Confidence 5666554 35788888886332222222223456889999977666655 45678999998743322222334456677
Q ss_pred EEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 369 VAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 369 v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
+++.. + .++.+-...+.|..+|..+++.+..+..
T Consensus 214 lav~~-------~-------~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 214 LTLFE-------D-------ILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp EEEET-------T-------EEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred EEEeC-------C-------EEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 88764 3 4777777788999999987776655543
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.83 E-value=0.0015 Score=70.87 Aligned_cols=187 Identities=9% Similarity=0.061 Sum_probs=102.8
Q ss_pred C-CCCCeEEEEec-CC----cEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCC-----c
Q 009715 165 A-KDGHDLLIGLN-SG----DVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHAD-----G 233 (528)
Q Consensus 165 ~-~~~~~l~~g~~-~G----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~d-----g 233 (528)
+ |||+.|+.... +| +|+++|+.+.. +.+.... ......++|+|||+ .|+....| .
T Consensus 182 S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~----~~l~~~~---------~~~~~~~~WspDg~-~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 182 APPEHDLVAFSVDMSGNEVYTIEFKRISDPS----QTIADKV---------SGTNGEIVWGPDHT-SLFYVTKDETLREN 247 (751)
T ss_dssp CTTTTCEEEEEEESSSSSCEEEEEEETTCTT----CCCCCCE---------EEECSCCEECSSTT-EEEEEEECTTCCEE
T ss_pred cCCCCCEEEEEEeCCCCceEEEEEEECCCCC----EeCCccc---------cCceeeEEEecCCC-EEEEEEECCCCCCC
Confidence 7 89998876654 33 49999987620 1110000 11134689999998 45544443 2
Q ss_pred eEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEee-cCCCeEEEEECCCCCEEEEEeC---CCcEEEEecC
Q 009715 234 NLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHI-CQGSINSIAFSTDGTYLATVGR---DGYLRVFDYS 309 (528)
Q Consensus 234 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~spdg~~l~s~~~---dg~i~vwd~~ 309 (528)
.|+++++.+... .....+.. +......+.|+|||++|+.... ...|.++|+.
T Consensus 248 ~v~~~~lgt~~~------------------------~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 248 KVWRHVMGKLQS------------------------EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp EEEEEETTSCGG------------------------GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred EEEEEECCCCch------------------------hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 577777654210 01111211 1233567899999999887663 3468889998
Q ss_pred Cc--eE--EeeecccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCeEEEE-eecCCCC--eEEEEEecCCCCC
Q 009715 310 KE--QL--ICGGKSYYGALLCCAWSMDGKYILTGGED----DLVQVWSMEDRKVVAW-GEGHNSW--VSGVAFDSYWSQP 378 (528)
Q Consensus 310 ~~--~~--~~~~~~~~~~v~~l~~sp~g~~l~sg~~d----g~v~vwd~~~~~~~~~-~~~h~~~--V~~v~f~p~~~~~ 378 (528)
++ +. ........+....+.|+..+.+++....+ ..|..+|+.+...... +..|... +..+.+.
T Consensus 304 ~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~------ 377 (751)
T 2xe4_A 304 KGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR------ 377 (751)
T ss_dssp SCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC------
T ss_pred CCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE------
Confidence 65 23 22233334555666665444444454443 3577777765222222 2234443 4444443
Q ss_pred CCCCCccceeEEEEEEeCCCeEEEE
Q 009715 379 NSDGTAETVMYRFGSVGQDTRLLLW 403 (528)
Q Consensus 379 ~~dg~~~~~~~~l~s~s~D~~i~lw 403 (528)
.+ .++++...|+..+||
T Consensus 378 --~~------~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 378 --SN------YLVVAGRRAGLTRIW 394 (751)
T ss_dssp --SS------EEEEEEEETTEEEEE
T ss_pred --CC------EEEEEEEeCCEEEEE
Confidence 22 577888888865554
No 278
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.73 E-value=0.012 Score=56.05 Aligned_cols=153 Identities=16% Similarity=0.184 Sum_probs=84.9
Q ss_pred ceeEEEEeeCCCcEEEEEeCC-c-eEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC
Q 009715 212 RCTSVTWVPGGDGAFVVGHAD-G-NLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST 289 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~d-g-~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 289 (528)
....+++.++|+ ++++.... + .|..++... +.. ..+... ........++..+
T Consensus 73 ~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~-g~~-~~~~~~-----------------------~~~~~~~g~~~~~ 126 (306)
T 2p4o_A 73 KVSGLAFTSNGD-LVATGWNADSIPVVSLVKSD-GTV-ETLLTL-----------------------PDAIFLNGITPLS 126 (306)
T ss_dssp EEEEEEECTTSC-EEEEEECTTSCEEEEEECTT-SCE-EEEEEC-----------------------TTCSCEEEEEESS
T ss_pred CceeEEEcCCCc-EEEEeccCCcceEEEEcCCC-CeE-EEEEeC-----------------------CCccccCcccccC
Confidence 578899999998 66555433 2 466666443 211 000000 0011223445455
Q ss_pred CCCEEEEEeCCCcEEEEecCCceE-Eeee-------c--ccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCC-CeE--
Q 009715 290 DGTYLATVGRDGYLRVFDYSKEQL-ICGG-------K--SYYGALLCCAWSMDGKYILTG-GEDDLVQVWSMED-RKV-- 355 (528)
Q Consensus 290 dg~~l~s~~~dg~i~vwd~~~~~~-~~~~-------~--~~~~~v~~l~~sp~g~~l~sg-~~dg~v~vwd~~~-~~~-- 355 (528)
++..+++-..++.|.++|..+++. +... . ......+.| +|++++|..+ ...+.|..|++.. ++.
T Consensus 127 ~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~ 204 (306)
T 2p4o_A 127 DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGE 204 (306)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCC
T ss_pred CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCc
Confidence 554444444578899999876532 2110 0 111234455 8888766655 4567899999874 321
Q ss_pred EEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc
Q 009715 356 VAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 406 (528)
Q Consensus 356 ~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~ 406 (528)
...+. .......+++++ +| +++++....+.|.++|..
T Consensus 205 ~~~~~-~~~~P~gi~vd~-------dG------~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 205 PEIFV-EQTNIDDFAFDV-------EG------NLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp CEEEE-ESCCCSSEEEBT-------TC------CEEEECBTTCCEEEECTT
T ss_pred cEEEe-ccCCCCCeEECC-------CC------CEEEEeCCCCeEEEECCC
Confidence 11111 113456688888 88 566666667888888864
No 279
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.70 E-value=0.019 Score=55.07 Aligned_cols=127 Identities=17% Similarity=0.262 Sum_probs=88.6
Q ss_pred CCeEEEEE--CCC-CC-EEEEEeCCCcEEEEecC-------CceEEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q 009715 280 GSINSIAF--STD-GT-YLATVGRDGYLRVFDYS-------KEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVW 348 (528)
Q Consensus 280 ~~v~~l~~--spd-g~-~l~s~~~dg~i~vwd~~-------~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vw 348 (528)
..+..+++ +|. +. ++++...+|.+..|++. +.+.+..+.. .+.+..|...+....|..+-++.-|..|
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~ 206 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKF 206 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEE
Confidence 45667777 774 54 67778889999999882 3456666653 5678889999988899999998777777
Q ss_pred ECC-----CCeEEEEee-cC-CCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc-CCeEEEEeec
Q 009715 349 SME-----DRKVVAWGE-GH-NSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE-MDEIVVPLRR 416 (528)
Q Consensus 349 d~~-----~~~~~~~~~-~h-~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~-~~~~~~~~~~ 416 (528)
+.+ +++.+..+. ++ ...+..|+..+. .+|+ .++|+++-.+.+..+||.. ..+.+..+..
T Consensus 207 da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~-----~~g~----gyLivSsQG~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 207 SAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYA-----ADGK----GYLMASSQGNSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp ECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEEC-----GGGC----EEEEEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred eCCcCCCCCceEEEEecCCccccCcceEEEEec-----CCCC----EEEEEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence 755 345665542 22 247889988540 0331 1577777678899999996 6666666653
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.65 E-value=0.059 Score=53.41 Aligned_cols=165 Identities=5% Similarity=-0.139 Sum_probs=105.1
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
.....|++.+.+.+++++-...+.|.+.+++. ... .......-.....|++.|.
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g--~~~------------------------~~l~~~~~~~P~~iavdp~ 212 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG--VKR------------------------KTLFRENGSKPRAIVVDPV 212 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTT--CSE------------------------EEEEECSSCCEEEEEEETT
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCC--Cce------------------------EEEEeCCCCCcceEEEecc
Confidence 35678999985554666666778888888763 110 1111112245789999996
Q ss_pred CCEEEEEe-C-CCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEeec--CCCC
Q 009715 291 GTYLATVG-R-DGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGG-EDDLVQVWSMEDRKVVAWGEG--HNSW 365 (528)
Q Consensus 291 g~~l~s~~-~-dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~-~dg~v~vwd~~~~~~~~~~~~--h~~~ 365 (528)
+.+|+... . .+.|...+++...........-.....|++++++..|..+. ..+.|..+|++.......+.. .-..
T Consensus 213 ~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~ 292 (400)
T 3p5b_L 213 HGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAH 292 (400)
T ss_dssp TTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSS
T ss_pred cCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCC
Confidence 66666554 2 36888888874333222232335678899998777766654 467899999875433222222 2345
Q ss_pred eEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEee
Q 009715 366 VSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLR 415 (528)
Q Consensus 366 V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 415 (528)
..+|++. .+ .++++....+.|..+|..+++.+..+.
T Consensus 293 P~gl~v~--------~~------~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 293 PFSLAVF--------ED------KVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEEEEE--------TT------EEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred CEEEEEe--------CC------EEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 5677774 33 577777788899999977777666554
No 281
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.59 E-value=0.0021 Score=64.63 Aligned_cols=154 Identities=8% Similarity=0.091 Sum_probs=96.9
Q ss_pred ceeEEEEee-CCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 212 RCTSVTWVP-GGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 212 ~v~~l~~~p-~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
....|+|+| ++. .|+++...+.|+.+|+... .+..+.........|+|+++
T Consensus 138 ~P~~lavdp~~~g-~Lyv~d~~~~I~~id~~~~---------------------------~v~~~~~~~~~P~~ia~d~~ 189 (430)
T 3tc9_A 138 GAVWLSFDPKNHN-HLYLVGEQHPTRLIDFEKE---------------------------YVSTVYSGLSKVRTICWTHE 189 (430)
T ss_dssp CCCEEEEETTEEE-EEEEEEBTEEEEEEETTTT---------------------------EEEEEECCCSCEEEEEECTT
T ss_pred CCCEEEECCCCCC-eEEEEeCCCcEEEEECCCC---------------------------EEEEEecCCCCcceEEEeCC
Confidence 467899997 344 4555555588888887641 11111112356889999999
Q ss_pred CCEEEEEeC-CC----cEEEEecCCceEE--eeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEee-c
Q 009715 291 GTYLATVGR-DG----YLRVFDYSKEQLI--CGGKSYYGALLCCAWSM-DGKYILTGGEDDLVQVWSMEDRKVVAWGE-G 361 (528)
Q Consensus 291 g~~l~s~~~-dg----~i~vwd~~~~~~~--~~~~~~~~~v~~l~~sp-~g~~l~sg~~dg~v~vwd~~~~~~~~~~~-~ 361 (528)
+++|+++.. ++ .+.+++.. +... ..+. .......++++| ++.++++-..++.|..|+...+....... +
T Consensus 190 G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~ 267 (430)
T 3tc9_A 190 ADSMIITNDQNNNDRPNNYILTRE-SGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ 267 (430)
T ss_dssp SSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred CCEEEEEeCCCCcccceEEEEeCC-Cceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC
Confidence 996666654 22 23334432 2111 1121 123356788999 77766666678899999998765422222 1
Q ss_pred CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC
Q 009715 362 HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 362 h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~ 407 (528)
...+...++|+| +|+ .++++-...+.|..+|...
T Consensus 268 ~~~~P~gia~~p-------dG~-----~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 268 DSGWEFHIQFHP-------SGN-----YAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SSSCCEEEEECT-------TSS-----EEEEEETTTTEEEEEEEET
T ss_pred CCCcceeEEEcC-------CCC-----EEEEEECCCCEEEEEeCCc
Confidence 234678999999 882 3666667788999988764
No 282
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.58 E-value=0.081 Score=57.20 Aligned_cols=165 Identities=5% Similarity=-0.133 Sum_probs=106.4
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
.....|++.+.+.+++++-...+.|.+.++.. .... ............|++.|.
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG--~~~~------------------------~l~~~~l~~P~gIaVDp~ 524 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG--VKRK------------------------TLFRENGSKPRAIVVDPV 524 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTS--SSEE------------------------EEEECTTCCEEEEEEETT
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCC--CeEE------------------------EEEeCCCCCcceEEEecC
Confidence 35678999988875777777788999998863 1110 111112245789999997
Q ss_pred CCEEEEEe-CC-CcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEeec--CCCC
Q 009715 291 GTYLATVG-RD-GYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGG-EDDLVQVWSMEDRKVVAWGEG--HNSW 365 (528)
Q Consensus 291 g~~l~s~~-~d-g~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~-~dg~v~vwd~~~~~~~~~~~~--h~~~ 365 (528)
..+|+... .+ +.|.+.+++.......+.........|++.+.+..|..+. ....|..++++.......+.. .-..
T Consensus 525 ~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~ 604 (791)
T 3m0c_C 525 HGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAH 604 (791)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSS
T ss_pred CCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCC
Confidence 55666554 33 6789999874444333333335678899998766666554 456899999875443333332 2234
Q ss_pred eEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEee
Q 009715 366 VSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLR 415 (528)
Q Consensus 366 V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 415 (528)
..+|++. .+ +++++-...+.|...|..+++.+..+.
T Consensus 605 P~glav~--------~~------~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 605 PFSLAVF--------ED------KVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp EEEEEEE--------TT------EEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CCEEEEe--------CC------EEEEEECCCCEEEEEeCCCCcceEEee
Confidence 5567664 33 577777788899999987776665554
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.57 E-value=0.012 Score=59.23 Aligned_cols=153 Identities=9% Similarity=0.057 Sum_probs=92.0
Q ss_pred ceeEEEEeeC--CCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC
Q 009715 212 RCTSVTWVPG--GDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST 289 (528)
Q Consensus 212 ~v~~l~~~p~--g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 289 (528)
....|+|+|+ .. .|+.+...+.|+.++.... .+..+.........++|++
T Consensus 140 ~P~gvavd~~s~~g-~Lyv~D~~~~I~~id~~~g---------------------------~v~~~~~~~~~P~giavd~ 191 (433)
T 4hw6_A 140 NIWRMMFDPNSNYD-DLYWVGQRDAFRHVDFVNQ---------------------------YVDIKTTNIGQCADVNFTL 191 (433)
T ss_dssp CCCEEEECTTTTTC-EEEEECBTSCEEEEETTTT---------------------------EEEEECCCCSCEEEEEECT
T ss_pred CCceEEEccccCCC-EEEEEeCCCCEEEEECCCC---------------------------EEEEeecCCCCccEEEECC
Confidence 4678999995 33 4555554488999987531 1111211235688999999
Q ss_pred CCCEEEEEeCCC-----cEEEEecCCceE-EeeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEe-e-
Q 009715 290 DGTYLATVGRDG-----YLRVFDYSKEQL-ICGGKSYYGALLCCAWSM-DGKYILTGGEDDLVQVWSMEDRKVVAWG-E- 360 (528)
Q Consensus 290 dg~~l~s~~~dg-----~i~vwd~~~~~~-~~~~~~~~~~v~~l~~sp-~g~~l~sg~~dg~v~vwd~~~~~~~~~~-~- 360 (528)
+|+ |+.+...+ .+..++...+.. ...+. .......++++| ++.++++-..++.|+.+|..++.....+ .
T Consensus 192 dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~ 269 (433)
T 4hw6_A 192 NGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM 269 (433)
T ss_dssp TCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC
T ss_pred CCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc
Confidence 999 44444321 133333321110 01111 223456688999 7776666666788999999877652222 2
Q ss_pred cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc
Q 009715 361 GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 406 (528)
Q Consensus 361 ~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~ 406 (528)
+....-..++|+| +|+ .++++-...++|+.+|+.
T Consensus 270 ~~~~~~~~ia~dp-------dG~-----~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 270 DTKGSNFHIVWHP-------TGD-----WAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp SCCSSCEEEEECT-------TSS-----EEEEEETTTTEEEEEEBC
T ss_pred CCCCCcccEEEeC-------CCC-----EEEEEeCCCCEEEEEeCC
Confidence 1223345799999 882 366666777899998875
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.56 E-value=0.14 Score=55.42 Aligned_cols=167 Identities=6% Similarity=-0.081 Sum_probs=104.4
Q ss_pred CCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC
Q 009715 210 NSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST 289 (528)
Q Consensus 210 ~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 289 (528)
...+..|+|++....++++-...+.|+.+++...... ......+.........|++.+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~----------------------~~~~~vi~~~l~~P~GLAvD~ 480 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV----------------------SSYDTVISRDIQAPDGLAVDW 480 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC------------------------------CEEEECSSCSCCCEEEEET
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCC----------------------cceeEEEecCCCCcceeeeee
Confidence 3467889999866646666667788988887631100 001111111224566899988
Q ss_pred CCCEEEE-EeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeEEEEeecCCCCe
Q 009715 290 DGTYLAT-VGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE--DDLVQVWSMEDRKVVAWGEGHNSWV 366 (528)
Q Consensus 290 dg~~l~s-~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~--dg~v~vwd~~~~~~~~~~~~h~~~V 366 (528)
.+..|+. -...+.|.+.+++.......+.........|++.|...+|+.... .+.|.+.+++.......+...-.+.
T Consensus 481 ~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P 560 (791)
T 3m0c_C 481 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 560 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCE
T ss_pred cCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCc
Confidence 6655554 456788999999855443333333456789999997666665543 3689999987544433344344678
Q ss_pred EEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeE
Q 009715 367 SGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEI 410 (528)
Q Consensus 367 ~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~ 410 (528)
..|++++. .+ +++++-.....|...|+.....
T Consensus 561 ~GLavD~~------~~------~LYwaD~~~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 561 NGITLDLL------SG------RLYWVDSKLHSISSIDVNGGNR 592 (791)
T ss_dssp EEEEEETT------TT------EEEEEETTTTEEEEEETTSCSC
T ss_pred eEEEEecC------CC------eEEEEeCCCCcEEEEecCCCce
Confidence 99999971 44 5666666778899988865443
No 285
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.56 E-value=0.065 Score=53.65 Aligned_cols=72 Identities=10% Similarity=0.057 Sum_probs=50.7
Q ss_pred CCeEEEEECC-CCCEEEEEeCCCcEEEEecCCceEEeeecc-cCCCeEEEEEcCCCCEEEE-EeCCCcEEEEECC
Q 009715 280 GSINSIAFST-DGTYLATVGRDGYLRVFDYSKEQLICGGKS-YYGALLCCAWSMDGKYILT-GGEDDLVQVWSME 351 (528)
Q Consensus 280 ~~v~~l~~sp-dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~l~~sp~g~~l~s-g~~dg~v~vwd~~ 351 (528)
.....++++| ++.++++-..++.|..++...+........ .......|+|+|++++|.. -...+.|..++.+
T Consensus 226 ~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 226 QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 4466889999 777666666778999999987765222211 1234678999999995554 4557789998765
No 286
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.51 E-value=0.036 Score=55.64 Aligned_cols=154 Identities=13% Similarity=0.171 Sum_probs=91.8
Q ss_pred ceeEEEEee-CCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEee-cCCCeEEEEECC
Q 009715 212 RCTSVTWVP-GGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHI-CQGSINSIAFST 289 (528)
Q Consensus 212 ~v~~l~~~p-~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp 289 (528)
....++++| +|. ++++-..++.|+.++..... ....+ +.. ....-..|+|+|
T Consensus 229 ~P~giavd~~~G~-lyv~d~~~~~V~~~d~~~g~-~~~~~------------------------~~~~~~~~~~~ia~dp 282 (433)
T 4hw6_A 229 GAKTCAVHPQNGK-IYYTRYHHAMISSYDPATGT-LTEEE------------------------VMMDTKGSNFHIVWHP 282 (433)
T ss_dssp SBCCCEECTTTCC-EEECBTTCSEEEEECTTTCC-EEEEE------------------------EECSCCSSCEEEEECT
T ss_pred CCCEEEEeCCCCe-EEEEECCCCEEEEEECCCCe-EEEEE------------------------eccCCCCCcccEEEeC
Confidence 456789999 665 66566677888888876311 10000 000 012234699999
Q ss_pred CCCEEEEEe-CCCcEEEEecC--Cce-----EEeeecc------------cCCCeEEEEE---------cCCCCEEEEEe
Q 009715 290 DGTYLATVG-RDGYLRVFDYS--KEQ-----LICGGKS------------YYGALLCCAW---------SMDGKYILTGG 340 (528)
Q Consensus 290 dg~~l~s~~-~dg~i~vwd~~--~~~-----~~~~~~~------------~~~~v~~l~~---------sp~g~~l~sg~ 340 (528)
++++|+.+. ..+.|+.++++ ++. .+....+ .......+++ .+++.++++-.
T Consensus 283 dG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~ 362 (433)
T 4hw6_A 283 TGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDR 362 (433)
T ss_dssp TSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEET
T ss_pred CCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEEC
Confidence 999655554 56789998865 232 1111000 1123566888 67777776666
Q ss_pred CCCcEEEEECCCCeEEEEeecC------------------CCCeEEEEEe-cCCCCCCCCCCccceeEEEEEEeCCCeEE
Q 009715 341 EDDLVQVWSMEDRKVVAWGEGH------------------NSWVSGVAFD-SYWSQPNSDGTAETVMYRFGSVGQDTRLL 401 (528)
Q Consensus 341 ~dg~v~vwd~~~~~~~~~~~~h------------------~~~V~~v~f~-p~~~~~~~dg~~~~~~~~l~s~s~D~~i~ 401 (528)
..+.|+.++. ++... ++.+. -.....|+++ + +| .++++-...++|+
T Consensus 363 ~n~~I~~~~~-~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~-------~g------~lyVaD~~n~rIr 427 (433)
T 4hw6_A 363 DSHTVRVLTP-EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMK-------RK------CFYIGDCDNHRVR 427 (433)
T ss_dssp TTTEEEEECT-TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETT-------TT------EEEEEEGGGTEEE
T ss_pred CCCEEEEECC-CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECC-------CC------EEEEEeCCCCEEE
Confidence 6788999985 45433 32221 1246788888 5 67 6777777777888
Q ss_pred EEEcc
Q 009715 402 LWDLE 406 (528)
Q Consensus 402 lwd~~ 406 (528)
.++++
T Consensus 428 ~i~~e 432 (433)
T 4hw6_A 428 KIAPE 432 (433)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 77764
No 287
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.43 E-value=0.0081 Score=63.98 Aligned_cols=115 Identities=13% Similarity=0.040 Sum_probs=75.3
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEEecCCceEEe--ee-cccCCCeEEEEEcCCCCEEEEEeC-CCcEEE
Q 009715 284 SIAFST-DGTYLATVGRDG-----------YLRVFDYSKEQLIC--GG-KSYYGALLCCAWSMDGKYILTGGE-DDLVQV 347 (528)
Q Consensus 284 ~l~~sp-dg~~l~s~~~dg-----------~i~vwd~~~~~~~~--~~-~~~~~~v~~l~~sp~g~~l~sg~~-dg~v~v 347 (528)
.+++.+ +++.++.|+.+. .+.+||+.+++... .+ ..+......+++.+++++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 566777 888888887543 58899998765321 12 112333445778899999999884 558999
Q ss_pred EECCCCeEEEEeecC-CCCeEEEEEecCCCCCCCCCCccceeEEEEEEe-CC-----CeEEEEEccCCeEE
Q 009715 348 WSMEDRKVVAWGEGH-NSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG-QD-----TRLLLWDLEMDEIV 411 (528)
Q Consensus 348 wd~~~~~~~~~~~~h-~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s-~D-----~~i~lwd~~~~~~~ 411 (528)
||..+.+-...-..+ ...-.+++..+ || ++++.|+ .+ ..+.+||..+.+-.
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~-------dg------~iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMS-------DG------RVFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECT-------TS------CEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred ecCcCCceeECCCCCccccccceEEec-------CC------eEEEEeCcccCCcccccceEeCCCCCcce
Confidence 999876533221111 22234556666 77 6788887 44 57999999887644
No 288
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.30 E-value=0.14 Score=53.83 Aligned_cols=161 Identities=6% Similarity=-0.092 Sum_probs=102.1
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG 291 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg 291 (528)
....|++.+.+.+++++-...+.|.+.+++. .....+ ....-.....|++.|..
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG--~~~~~l------------------------~~~~l~~P~~iavdp~~ 134 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDG--QHRQVL------------------------VWKDLDSPRALALDPAE 134 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTS--TTCEEE------------------------ECSSCCCEEEEEEETTT
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCC--CcEEEE------------------------EeCCCCCcccEEEccCC
Confidence 5678999887765666666778899998863 111111 01112457899999954
Q ss_pred CEEEEEe--CCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEeecCCCCeEE
Q 009715 292 TYLATVG--RDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGG-EDDLVQVWSMEDRKVVAWGEGHNSWVSG 368 (528)
Q Consensus 292 ~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~-~dg~v~vwd~~~~~~~~~~~~h~~~V~~ 368 (528)
.+|+... ..+.|...+++......... .......|+++++++.|..+. ..+.|..+|++.... ..+...-....+
T Consensus 135 G~lY~tD~g~~~~I~r~~~dG~~~~~l~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~g 212 (628)
T 4a0p_A 135 GFMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFG 212 (628)
T ss_dssp TEEEEEECSSSCEEEEEETTSCSCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEE
T ss_pred CeEEEeCCCCCCEEEEEeCCCCceEEEEC-CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceE
Confidence 4555554 25678888886443322222 345678899999777666554 467899999875433 233333445667
Q ss_pred EEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEe
Q 009715 369 VAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPL 414 (528)
Q Consensus 369 v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 414 (528)
|++.. + +++++-...+.|...|..+++....+
T Consensus 213 lav~~--------~------~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 213 LTQYQ--------D------YIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp EEEET--------T------EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEEC--------C------EEEEecCCCCEEEEEECCCCCceEEE
Confidence 88763 3 56777777889999997766544433
No 289
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.25 E-value=0.13 Score=48.66 Aligned_cols=223 Identities=10% Similarity=0.087 Sum_probs=127.1
Q ss_pred CccEEEEeCCCcEEEEeCCCCCCC-------------CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCc
Q 009715 141 KGTYIIFNVGDAIFISDLNSQDKD-------------AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGS 207 (528)
Q Consensus 141 ~g~~~~~~~~~~i~v~~~~~~~~~-------------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 207 (528)
...+++...++.+.+++++...+. --+.+.|+.-+. ..|+.|++.... .+...|.+...
T Consensus 77 ~~~ViALrag~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~-taVyHWs~~~~s-------~P~kvFdR~~~ 148 (365)
T 2xzh_A 77 ASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTD-NAVYHWSMEGES-------QPVKMFDRHSS 148 (365)
T ss_dssp SSSEEEEEETTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEES-SEEEEEESSTTC-------CCEEEEECCGG
T ss_pred CccEEEEecCCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEcC-CcEEEEcccCCC-------CCceeeecchh
Confidence 445666666666677766655433 223344443333 379999987511 11122334333
Q ss_pred ccCCceeEEEEeeCCCcEEEEEe------CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCC
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGH------ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGS 281 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 281 (528)
.....|.....+++.+.++++|- -.|.+.+|..+. +.-+.+.+|.+.
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er---------------------------~~sQ~ieGhaa~ 201 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---------------------------KVSQPIEGHAAS 201 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT---------------------------TEEEEECCSEEE
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc---------------------------cccceeeeeeee
Confidence 34677888888899984444442 236788888874 223334444333
Q ss_pred eEEEEECC--C-CCEEEEEeC---CCcEEEEecCCc---e------EEeeecc---cCCCeEEEEEcCCCCEEEEEeCCC
Q 009715 282 INSIAFST--D-GTYLATVGR---DGYLRVFDYSKE---Q------LICGGKS---YYGALLCCAWSMDGKYILTGGEDD 343 (528)
Q Consensus 282 v~~l~~sp--d-g~~l~s~~~---dg~i~vwd~~~~---~------~~~~~~~---~~~~v~~l~~sp~g~~l~sg~~dg 343 (528)
...+.+.- . ...++.+.. .+.++|.++... . .+..+.. -.+-..++..++.-..+..-..-|
T Consensus 202 F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G 281 (365)
T 2xzh_A 202 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG 281 (365)
T ss_dssp EEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTS
T ss_pred eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCc
Confidence 32222211 1 123333332 257888888432 1 1111111 134455777887777788888899
Q ss_pred cEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEE
Q 009715 344 LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIV 411 (528)
Q Consensus 344 ~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~ 411 (528)
.|++||++++.++..-+-....|..-+.+.. .+ =++.....|.|..-.+...+.+
T Consensus 282 ~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~------~~-------Gi~~Vnr~GqVl~v~v~~~~iv 336 (365)
T 2xzh_A 282 YIHLYDLETGTCIYMNRISGETIFVTAPHEA------TA-------GIIGVNRKGQVLSVCVEEENII 336 (365)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEEEGG------GT-------EEEEEETTCEEEEEEECTTTHH
T ss_pred EEEEEEcccCcEEEEeccCCCceEEecccCC------CC-------cEEEEcCCCEEEEEEECcccEe
Confidence 9999999999999887766666665555430 12 2555557777776666655543
No 290
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.16 E-value=0.047 Score=51.91 Aligned_cols=115 Identities=9% Similarity=0.004 Sum_probs=76.1
Q ss_pred CCeEEEEECCCCCEEEEEe-CCCcEEEEecCCceEEe-eecc----cCC--CeEEEEE---cCCCCEEEEEe--------
Q 009715 280 GSINSIAFSTDGTYLATVG-RDGYLRVFDYSKEQLIC-GGKS----YYG--ALLCCAW---SMDGKYILTGG-------- 340 (528)
Q Consensus 280 ~~v~~l~~spdg~~l~s~~-~dg~i~vwd~~~~~~~~-~~~~----~~~--~v~~l~~---sp~g~~l~sg~-------- 340 (528)
.-..+++|.+....|..++ ..+.|..||...+.... .+.. ... .+..|.| .|+++++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 3345789988555555555 78999999998554332 2221 111 3578999 68888777644
Q ss_pred -----CCCcEEEEECC---CCeEEEEee--cCC-----------CCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC-C
Q 009715 341 -----EDDLVQVWSME---DRKVVAWGE--GHN-----------SWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD-T 398 (528)
Q Consensus 341 -----~dg~v~vwd~~---~~~~~~~~~--~h~-----------~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D-~ 398 (528)
.+..|..||+. +++.+.... ... .....++.++ +| +..++++.- +
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-------~G------naYVt~s~~~~ 159 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-------DG------NSYVAFALGMP 159 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-------TS------CEEEEEEESSC
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-------CC------CEEEeCCCCCC
Confidence 26789999999 777654443 111 2488999999 88 577777776 7
Q ss_pred eEEEEEccC
Q 009715 399 RLLLWDLEM 407 (528)
Q Consensus 399 ~i~lwd~~~ 407 (528)
.|...|...
T Consensus 160 ~I~rV~pdG 168 (334)
T 2p9w_A 160 AIARVSADG 168 (334)
T ss_dssp EEEEECTTS
T ss_pred eEEEEeCCC
Confidence 766655443
No 291
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.15 E-value=0.011 Score=56.15 Aligned_cols=162 Identities=11% Similarity=0.155 Sum_probs=102.5
Q ss_pred eeEEEEeeCCCcEEEEEe-CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEE---C
Q 009715 213 CTSVTWVPGGDGAFVVGH-ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAF---S 288 (528)
Q Consensus 213 v~~l~~~p~g~~~l~tg~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~---s 288 (528)
-.+++|++... .|..++ ..++|..|+...+......++.... ..++ ...+..|.| .
T Consensus 15 PE~~~wd~~~g-~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~------------~g~~-------~~~~sGl~~~~~D 74 (334)
T 2p9w_A 15 PEDTIYDRTRQ-VFYQSNLYKGRIEVYNPKTQSHFNVVIDGASS------------NGDG-------EQQMSGLSLLTHD 74 (334)
T ss_dssp CSCEEEETTTT-EEEEEETTTTEEEEECTTTCCEEEECCTTTCC------------SSCC-------SEEEEEEEESSSS
T ss_pred CcCccCcCCCC-EEEEEeccCCEEEEEcCCCCeEEEEecCCccc------------cCCC-------cceeeEEEEeccC
Confidence 45789998766 555555 7899999998632211111111000 0000 013468999 6
Q ss_pred CCCCEEEEEe-------------CCCcEEEEecC---CceEEeeec--c-----------cCCCeEEEEEcCCCCEEEEE
Q 009715 289 TDGTYLATVG-------------RDGYLRVFDYS---KEQLICGGK--S-----------YYGALLCCAWSMDGKYILTG 339 (528)
Q Consensus 289 pdg~~l~s~~-------------~dg~i~vwd~~---~~~~~~~~~--~-----------~~~~v~~l~~sp~g~~l~sg 339 (528)
|+++++++.. .+..|..||+. +++.+.... . -......++..++|+..+++
T Consensus 75 ~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~ 154 (334)
T 2p9w_A 75 NSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAF 154 (334)
T ss_dssp SCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEE
T ss_pred CCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeC
Confidence 8877776543 26789999999 776654332 1 11347899999999988888
Q ss_pred eCC-CcEEEEECCCCeEEEEeec-----CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC
Q 009715 340 GED-DLVQVWSMEDRKVVAWGEG-----HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 340 ~~d-g~v~vwd~~~~~~~~~~~~-----h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~ 407 (528)
+.. +.|..++.+.......... .....+.|+++| || ++|+....++.|..+|++.
T Consensus 155 s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~p-------dg------~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 155 ALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDP-------HS------NKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEET-------TT------TEEEEESSSSSEEEEECSS
T ss_pred CCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeC-------CC------CEEEEEcCCCeEEEEcCCC
Confidence 877 7877777654333222211 122367999999 98 5566665599999999874
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.15 E-value=0.19 Score=48.07 Aligned_cols=106 Identities=13% Similarity=0.153 Sum_probs=60.9
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEee-ecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC--CCCeEEE
Q 009715 281 SINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICG-GKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSM--EDRKVVA 357 (528)
Q Consensus 281 ~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~--~~~~~~~ 357 (528)
.+..|.+.+++..++.+ .++.|.. ..+.++.... ...+...+..+++.|++.+++.+...+..+-+|- .+-+.+.
T Consensus 123 ~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~ 200 (327)
T 2xbg_A 123 SPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN 200 (327)
T ss_dssp CEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE
T ss_pred CeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC
Confidence 45667776666655555 4554422 2222322221 2234567889999999988877654433333442 2223332
Q ss_pred EeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEE
Q 009715 358 WGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWD 404 (528)
Q Consensus 358 ~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd 404 (528)
......+..+.+.+ ++ .+..++.++.+++++
T Consensus 201 --~~~~~~~~~~~~~~-------~g-------~~~~~~~~G~~~~s~ 231 (327)
T 2xbg_A 201 --RTTSRRLHNMGFTP-------DG-------RLWMIVNGGKIAFSD 231 (327)
T ss_dssp --CCSSSCEEEEEECT-------TS-------CEEEEETTTEEEEEE
T ss_pred --CCCCCccceeEECC-------CC-------CEEEEeCCceEEEec
Confidence 23556788999988 77 344556678777664
No 293
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.10 E-value=0.0026 Score=68.14 Aligned_cols=162 Identities=6% Similarity=-0.093 Sum_probs=93.9
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC-
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD- 290 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd- 290 (528)
.+..|+|++.+..++++-...+.|+.+++........... .+.........|++.+.
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~----------------------~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT----------------------VISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCC----------------------BCCSCC--CCCEECCCSS
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEE----------------------EEeCCCCCcceEEEEeeC
Confidence 5678999987763444545667899998864100000000 00000123456788764
Q ss_pred CCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeEEEEeecCCCCeEE
Q 009715 291 GTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE--DDLVQVWSMEDRKVVAWGEGHNSWVSG 368 (528)
Q Consensus 291 g~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~--dg~v~vwd~~~~~~~~~~~~h~~~V~~ 368 (528)
++++++-...+.|.++++........+.........|+++|.+.+|+.... .+.|.++++........+...-...+.
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnG 544 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 544 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCC
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccE
Confidence 444444455678999998855443333322344677899996655554432 267888887643222222223346778
Q ss_pred EEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC
Q 009715 369 VAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 369 v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~ 407 (528)
|+|+| ++. +++++-...+.|..+|+..
T Consensus 545 lavd~-------~~~-----~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 545 ITLDL-------LSG-----RLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp EEECT-------TTC-----CEEEEETTTTEEEEECSSS
T ss_pred EEEec-------cCC-----EEEEEecCCCeEEEEccCC
Confidence 99998 641 4566666778899998864
No 294
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.07 E-value=0.4 Score=50.42 Aligned_cols=189 Identities=7% Similarity=-0.069 Sum_probs=114.3
Q ss_pred eEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCc
Q 009715 170 DLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSS 249 (528)
Q Consensus 170 ~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~ 249 (528)
+|+.. ....|+..++...... .. ..+ ..-..+..|+|++.+..++++-..++.|+.++++... . .
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~---~~---~~~-----~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~-~-~- 72 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNN---VA---IPL-----TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA-L-E- 72 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCE---EE---CCC-----CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-C-E-
T ss_pred EEEEE-eCCcEEEEECCCCCcc---eE---EEc-----CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC-c-E-
Confidence 44443 5668888888652100 00 000 0223578999999777466666678899988876311 0 0
Q ss_pred cccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEE-EeCCCcEEEEecCCceEEeeecccCCCeEEEE
Q 009715 250 FPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLAT-VGRDGYLRVFDYSKEQLICGGKSYYGALLCCA 328 (528)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s-~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~ 328 (528)
..+.........|++.+.+..|+. -...+.|.+.+++.......+.........|+
T Consensus 73 -----------------------~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~ia 129 (628)
T 4a0p_A 73 -----------------------HVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALA 129 (628)
T ss_dssp -----------------------EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEE
T ss_pred -----------------------EEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEE
Confidence 111111135668888875555544 44567899999874432222223345578999
Q ss_pred EcCCCCEEEEEe--CCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc
Q 009715 329 WSMDGKYILTGG--EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 406 (528)
Q Consensus 329 ~sp~g~~l~sg~--~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~ 406 (528)
+.|...+|.... ..+.|...+++.......+ ..-.+...|++++ ++. +++++-...+.|...|+.
T Consensus 130 vdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~~~~~P~GlalD~-------~~~-----~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 130 LDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-PNVGRANGLTIDY-------AKR-----RLYWTDLDTNLIESSNML 196 (628)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSCSSEEEEEEET-------TTT-----EEEEEETTTTEEEEEETT
T ss_pred EccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-CCCCCcceEEEcc-------ccC-----EEEEEECCCCEEEEEcCC
Confidence 999655555554 2567888888754333223 3456789999998 642 566666777889999986
Q ss_pred CCe
Q 009715 407 MDE 409 (528)
Q Consensus 407 ~~~ 409 (528)
...
T Consensus 197 G~~ 199 (628)
T 4a0p_A 197 GLN 199 (628)
T ss_dssp SCS
T ss_pred CCc
Confidence 543
No 295
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.05 E-value=0.37 Score=50.58 Aligned_cols=163 Identities=9% Similarity=-0.056 Sum_probs=100.4
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
.....|+|++.+..++++-...+.|+.++++..... .............+++.+.
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~-------------------------~~v~~~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV-------------------------QNVVVSGLLSPDGLACDWL 94 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----C-------------------------EEEECSSCSCEEEEEEETT
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce-------------------------EEEEeCCCCCcCeEEEEec
Confidence 357889999977735555555678888887631100 0111111246789999985
Q ss_pred CCEEEEE-eCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeEEEEeecCCCCeE
Q 009715 291 GTYLATV-GRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE--DDLVQVWSMEDRKVVAWGEGHNSWVS 367 (528)
Q Consensus 291 g~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~--dg~v~vwd~~~~~~~~~~~~h~~~V~ 367 (528)
+..|+.+ ...+.|.+.+++.......+.........|++.|.+.+|..... ...|...+++...........-.+.+
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~ 174 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPN 174 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEE
T ss_pred CCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCc
Confidence 5555544 56788999999854332222233345678999997665555543 45777777764333333333456789
Q ss_pred EEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeE
Q 009715 368 GVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEI 410 (528)
Q Consensus 368 ~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~ 410 (528)
.|++++ ++. +++++-...+.|...|+.....
T Consensus 175 Glald~-------~~~-----~LY~aD~~~~~I~~~~~dG~~~ 205 (619)
T 3s94_A 175 GLTLDY-------EEQ-----KLYWADAKLNFIHKSNLDGTNR 205 (619)
T ss_dssp EEEEET-------TTT-----EEEEEETTTCCEEEESSSCCEE
T ss_pred EEEEEc-------cCC-----EEEEEeCCCCeEEEecCCCCcc
Confidence 999998 541 5666667778899999875443
No 296
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.05 E-value=0.23 Score=48.83 Aligned_cols=224 Identities=10% Similarity=0.084 Sum_probs=131.1
Q ss_pred CccEEEEeCCCcEEEEeCCCCCCC-------------CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCc
Q 009715 141 KGTYIIFNVGDAIFISDLNSQDKD-------------AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGS 207 (528)
Q Consensus 141 ~g~~~~~~~~~~i~v~~~~~~~~~-------------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 207 (528)
...+++...++.+.+++++...+. --+.+.|+.-+ +..|+.|++... . .+...|.+...
T Consensus 76 ~~~iiALrag~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT-~taVyHWsi~~~-s------~P~kvFdR~~~ 147 (494)
T 1bpo_A 76 ASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT-DNAVYHWSMEGE-S------QPVKMFDRHSS 147 (494)
T ss_dssp SSSCEEEEETTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEEC-SSEEEEEESSSS-C------CCEEEEECCGG
T ss_pred CCcEEEEecCCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEc-CCeeEEecccCC-C------Cchhheecchh
Confidence 445666666667777777655433 11233443333 347999998641 0 11122444333
Q ss_pred ccCCceeEEEEeeCCCcEEEEEe------CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCC
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGH------ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGS 281 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 281 (528)
.....|.....+++.+.++++|- -.|.+.+|..+. +.-+.+.+|.+.
T Consensus 148 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er---------------------------~~sQ~ieGhaa~ 200 (494)
T 1bpo_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---------------------------KVSQPIEGHAAS 200 (494)
T ss_dssp GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT---------------------------CCEEEECCSEEE
T ss_pred cccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc---------------------------cccchheeeeee
Confidence 35677888888999994444442 347788998874 233444555444
Q ss_pred eEEEEECCC---CCEEEEEeCC---CcEEEEecCCc---------eEEeeec---ccCCCeEEEEEcCCCCEEEEEeCCC
Q 009715 282 INSIAFSTD---GTYLATVGRD---GYLRVFDYSKE---------QLICGGK---SYYGALLCCAWSMDGKYILTGGEDD 343 (528)
Q Consensus 282 v~~l~~spd---g~~l~s~~~d---g~i~vwd~~~~---------~~~~~~~---~~~~~v~~l~~sp~g~~l~sg~~dg 343 (528)
...+.+.-+ ...++.+... +.++|.++... +.+..+. .-.+--.++..++.-..+..-..-|
T Consensus 201 F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G 280 (494)
T 1bpo_A 201 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG 280 (494)
T ss_dssp EEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTS
T ss_pred eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCc
Confidence 333333211 1234444432 68999988532 1111111 1134455788888777888888999
Q ss_pred cEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEE
Q 009715 344 LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVV 412 (528)
Q Consensus 344 ~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~ 412 (528)
.|++||++++.++..-+-....|..-+.+. +. .=++.....|.|.--.+.....+.
T Consensus 281 ~i~lyDleTgt~i~~nrIs~~~iF~t~~~~-------~~------~Gi~~Vnr~GqVl~v~v~e~~ivp 336 (494)
T 1bpo_A 281 YIHLYDLETGTCIYMNRISGETIFVTAPHE-------AT------AGIIGVNRKGQVLSVCVEEENIIP 336 (494)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEEET-------TT------TEEEEEETTCEEEEEEECTTTHHH
T ss_pred eEEEEecccceeeeeecccCCceEEecccC-------CC------CcEEEEccCceEEEEEEccccchh
Confidence 999999999999987776666676555544 21 125555677777777666655443
No 297
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.99 E-value=0.37 Score=48.72 Aligned_cols=71 Identities=11% Similarity=0.007 Sum_probs=46.6
Q ss_pred CeEEEEECC-CCCEEEEEeCCCcEEEEecC-------CceE-----------Eee-ec-ccCCCeEEEEEcCCCCEEEEE
Q 009715 281 SINSIAFST-DGTYLATVGRDGYLRVFDYS-------KEQL-----------ICG-GK-SYYGALLCCAWSMDGKYILTG 339 (528)
Q Consensus 281 ~v~~l~~sp-dg~~l~s~~~dg~i~vwd~~-------~~~~-----------~~~-~~-~~~~~v~~l~~sp~g~~l~sg 339 (528)
....++++| ++.++++-..++.|..+|++ ++.. ... +. ........|+|+|+|++|..+
T Consensus 248 ~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYva 327 (496)
T 3kya_A 248 QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFG 327 (496)
T ss_dssp CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEE
Confidence 445788999 55556666678889999997 4543 111 11 122345789999999965544
Q ss_pred -eCCCcEEEEECC
Q 009715 340 -GEDDLVQVWSME 351 (528)
Q Consensus 340 -~~dg~v~vwd~~ 351 (528)
.....|+.++..
T Consensus 328 D~~~h~I~kid~d 340 (496)
T 3kya_A 328 VINNHYFMRSDYD 340 (496)
T ss_dssp ETTTTEEEEEEEE
T ss_pred eCCCCEEEEEecC
Confidence 456788886543
No 298
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.93 E-value=0.19 Score=48.13 Aligned_cols=152 Identities=16% Similarity=0.130 Sum_probs=90.9
Q ss_pred cCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEEC
Q 009715 209 NNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFS 288 (528)
Q Consensus 209 h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 288 (528)
....+..+++.+++. +++++ .+|.++.-+ +.++....... ......+..+.+.
T Consensus 161 ~~~~~~~~~~~~~~~-~~~~g-~~G~~~~S~-d~gG~tW~~~~------------------------~~~~~~~~~~~~~ 213 (327)
T 2xbg_A 161 AIGVMRNLNRSPSGE-YVAVS-SRGSFYSTW-EPGQTAWEPHN------------------------RTTSRRLHNMGFT 213 (327)
T ss_dssp CCCCEEEEEECTTSC-EEEEE-TTSSEEEEE-CTTCSSCEEEE------------------------CCSSSCEEEEEEC
T ss_pred CCcceEEEEEcCCCc-EEEEE-CCCcEEEEe-CCCCCceeECC------------------------CCCCCccceeEEC
Confidence 345688999999887 56555 455554332 11111111110 0123567889999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCceEEeeecc----cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee---c
Q 009715 289 TDGTYLATVGRDGYLRVFDYSKEQLICGGKS----YYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGE---G 361 (528)
Q Consensus 289 pdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~---~ 361 (528)
+++..+ .++.+|.+++.+.+.++....+.. ....+..+.+.+++.+++++. ++.| ++..+.++.-..+. .
T Consensus 214 ~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~ 290 (327)
T 2xbg_A 214 PDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKK 290 (327)
T ss_dssp TTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTT
T ss_pred CCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCC
Confidence 988755 445678877765443554443321 223588999998888777664 6766 45555554433333 2
Q ss_pred CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEE
Q 009715 362 HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWD 404 (528)
Q Consensus 362 h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd 404 (528)
+...+.++.|.+ ++ .++.++.+|.|.-++
T Consensus 291 ~~~~~~~v~~~~-------~~-------~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 291 VPSNFYKILFFS-------PD-------QGFILGQKGILLRYV 319 (327)
T ss_dssp SSSCCCEEEEEE-------TT-------EEEEECSTTEEEEEC
T ss_pred CCCCeEEEEEEC-------CC-------ceEEEcCCceEEEEc
Confidence 345688899976 66 577778899877665
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.88 E-value=0.21 Score=47.84 Aligned_cols=138 Identities=18% Similarity=0.272 Sum_probs=85.2
Q ss_pred EEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC----CC---EEEEE
Q 009715 225 AFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD----GT---YLATV 297 (528)
Q Consensus 225 ~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd----g~---~l~s~ 297 (528)
+++.....+-+.+||+. ++.. +.+. .+.++.+..-|+ |+ ++++.
T Consensus 42 ~ii~t~k~~gL~Vydl~--G~~l-------------------------~~~~--~g~~nnVD~r~~~~l~g~~~dla~as 92 (355)
T 3amr_A 42 KLITTNKKSGLVVYSLD--GKML-------------------------HSYN--TGKLNNVDIRYDFPLNGKKVDIAAAS 92 (355)
T ss_dssp EEEEEETTTEEEEEETT--SCEE-------------------------EEEC--CSCEEEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEcCCCCEEEEcCC--CcEE-------------------------EEcc--CCCcccEEEecccccCCceEeEEEEe
Confidence 67777778899999994 3322 2211 145555555542 22 22333
Q ss_pred eC---CCcEEEEec--CCceEEeeecc------cC-CCeEEEEE--cCC-CC-EEEEEeCCCcEEEEECC-------CCe
Q 009715 298 GR---DGYLRVFDY--SKEQLICGGKS------YY-GALLCCAW--SMD-GK-YILTGGEDDLVQVWSME-------DRK 354 (528)
Q Consensus 298 ~~---dg~i~vwd~--~~~~~~~~~~~------~~-~~v~~l~~--sp~-g~-~l~sg~~dg~v~vwd~~-------~~~ 354 (528)
.. +..|++|++ .+++ +..+.. .. ..+..+++ +|. ++ ++++...++.+..|++. +.+
T Consensus 93 ~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~ 171 (355)
T 3amr_A 93 NRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGK 171 (355)
T ss_dssp ECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEE
T ss_pred CCCCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccce
Confidence 33 578999977 3443 333311 11 44555666 674 54 67788889999999882 346
Q ss_pred EEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc
Q 009715 355 VVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 406 (528)
Q Consensus 355 ~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~ 406 (528)
.++++. ..+.+..+..++ .. .+|+.+-+|.-|..+|.+
T Consensus 172 lVR~f~-lgsq~EgcvvDd-------~~------g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 172 KVRAFK-MNSQTEGMAADD-------EY------GRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEEEE-CSSCEEEEEEET-------TT------TEEEEEETTTEEEEEECS
T ss_pred EEEEec-CCCCcceEEEcC-------CC------CeEEEecccceEEEEeCC
Confidence 677776 456788888887 43 378888888666555644
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.84 E-value=0.01 Score=63.48 Aligned_cols=165 Identities=5% Similarity=-0.108 Sum_probs=96.6
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG 291 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg 291 (528)
....|++.+.+.+++++-...+.|.++++.. .....+ +.........|++.|++
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg--~~~~~l------------------------~~~~~~~P~giavDp~~ 507 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKG--VKRKTL------------------------FREQGSKPRAIVVDPVH 507 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSS--CCEEEE------------------------CCCSSCCCCCEECCSSS
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCC--CceEEE------------------------EeCCCCCcceEEEccCC
Confidence 3456888865553666656678898888763 111100 00011345678899865
Q ss_pred CEEEEEe-CC-CcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCeEEEEee--cCCCCe
Q 009715 292 TYLATVG-RD-GYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYIL-TGGEDDLVQVWSMEDRKVVAWGE--GHNSWV 366 (528)
Q Consensus 292 ~~l~s~~-~d-g~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~-sg~~dg~v~vwd~~~~~~~~~~~--~h~~~V 366 (528)
.+|+... .. +.|.++++........+.........|+|+|++..|. +-...+.|.++++........+. ......
T Consensus 508 g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P 587 (699)
T 1n7d_A 508 GFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHP 587 (699)
T ss_dssp SCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSC
T ss_pred CcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCc
Confidence 5555443 22 6788877763222111112223456799999765444 44556789999987533222222 122334
Q ss_pred EEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 367 SGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 367 ~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
..|++.. + .++++....+.|..+|..+++.+..+..
T Consensus 588 ~glavd~-------~-------~lywtd~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 588 FSLAVFE-------D-------KVFWTDIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp CCCEEET-------T-------EEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred eEeEEEC-------C-------EEEEEeCCCCeEEEEEccCCCceEEeec
Confidence 4566654 3 4777777788999999988888777654
No 301
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.81 E-value=0.41 Score=46.34 Aligned_cols=100 Identities=21% Similarity=0.179 Sum_probs=61.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEecCCceE--Eeeec---ccCCCeEEEEEcCC---CCEEEEEeC-C-----CcE
Q 009715 280 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQL--ICGGK---SYYGALLCCAWSMD---GKYILTGGE-D-----DLV 345 (528)
Q Consensus 280 ~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~--~~~~~---~~~~~v~~l~~sp~---g~~l~sg~~-d-----g~v 345 (528)
.....|+|.|||++ +++..++.|++++ +++. +..+. ........|+++|+ +..|.++.. + ..|
T Consensus 31 ~~P~~ia~~pdG~l-~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGM-LIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCE-EEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeE-EEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 45779999999985 4456679999998 3442 22221 12356889999998 555554433 2 578
Q ss_pred EEEECCCC-----eEE-EEee---cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe
Q 009715 346 QVWSMEDR-----KVV-AWGE---GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG 395 (528)
Q Consensus 346 ~vwd~~~~-----~~~-~~~~---~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s 395 (528)
..|+...+ +.+ ..+. +.......++|.| || +++++.+
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-------dG------~Lyv~~G 153 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-------DG------MLYVTTG 153 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-------TS------CEEEECC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-------CC------CEEEEEC
Confidence 88887643 122 2132 1112346899999 99 5666644
No 302
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.77 E-value=0.091 Score=49.45 Aligned_cols=104 Identities=13% Similarity=0.172 Sum_probs=57.7
Q ss_pred CCCEEEEEeCC-----CcEEEEecCCceEEee--ecccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeEEE
Q 009715 290 DGTYLATVGRD-----GYLRVFDYSKEQLICG--GKSYYGALLCCAWSMDGKYILTGGED-----DLVQVWSMEDRKVVA 357 (528)
Q Consensus 290 dg~~l~s~~~d-----g~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~g~~l~sg~~d-----g~v~vwd~~~~~~~~ 357 (528)
+++.++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+++.+-..
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 56677777654 4588999987754332 1111111222222 56777777664 468999998765322
Q ss_pred E--eecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC-----CeEEEEEccCCeE
Q 009715 358 W--GEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD-----TRLLLWDLEMDEI 410 (528)
Q Consensus 358 ~--~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D-----~~i~lwd~~~~~~ 410 (528)
. +.........+.+ ++ .+++.|+.+ ..|.+||+.+.+-
T Consensus 237 ~~~~p~~r~~~~~~~~---------~~------~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 237 VTSMTTPRCYVGATVL---------RG------RLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp ECCCSSCCBSCEEEEE---------TT------EEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred CCCCCCcccceeEEEE---------CC------EEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 2 2111112222333 55 577777765 3577888877653
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.77 E-value=0.7 Score=48.48 Aligned_cols=164 Identities=6% Similarity=-0.072 Sum_probs=97.7
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
.....|++.+.+.+++++-...+.|.+.+++. .....+ ....-.....|++.|.
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG--~~~~~l------------------------~~~~l~~P~~Iavdp~ 137 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDG--SLRKVL------------------------FWQELDQPRAIALDPS 137 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEE------------------------ECSSCSCCCCEEEETT
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCC--CCEEEE------------------------EeCCCCCCceEEEecC
Confidence 35789999997664666667788999999863 111111 0011245678999996
Q ss_pred CCEEEEEeC--CCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeEEEEeecCCCCeE
Q 009715 291 GTYLATVGR--DGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG-GEDDLVQVWSMEDRKVVAWGEGHNSWVS 367 (528)
Q Consensus 291 g~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg-~~dg~v~vwd~~~~~~~~~~~~h~~~V~ 367 (528)
+.+|+.... .+.|...+++...........-.....|++++++..|..+ ...+.|..+|++.......+.+......
T Consensus 138 ~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~ 217 (619)
T 3s94_A 138 SGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPF 217 (619)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CC
T ss_pred CCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCce
Confidence 555555542 4567777776332222222233457889999976665555 4467899999875433222221222334
Q ss_pred EEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEe
Q 009715 368 GVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPL 414 (528)
Q Consensus 368 ~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 414 (528)
+|++.. + .++++-...+.|...|..+++....+
T Consensus 218 gi~~~~-------~-------~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 218 ALTLFE-------D-------ILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp CEEESS-------S-------EEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred EEEEeC-------C-------EEEEecCCCCEEEEEECCCCcccEEE
Confidence 666654 3 46677777888999998777654433
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.73 E-value=0.19 Score=48.54 Aligned_cols=167 Identities=12% Similarity=0.130 Sum_probs=90.7
Q ss_pred cCCcEEEEEccccccccccceeeeeeeccC-CcccCCceeEEEEee--CCCc-EEEEEeC--CceEEEEEcCCCCCCCCc
Q 009715 176 NSGDVYSVSLRQQLQDVGKKLVGAHHYNKD-GSVNNSRCTSVTWVP--GGDG-AFVVGHA--DGNLYVYEKSKDGAGDSS 249 (528)
Q Consensus 176 ~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~~p--~g~~-~l~tg~~--dg~v~vwd~~~~~~~~~~ 249 (528)
.+|.|+++|+.+.... .+. +.+... .....-....|.+.+ ++.. ++++-.. +.+|.+|+++.++.....
T Consensus 81 ~~G~I~~~d~~~~~~~-~~~----l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~ 155 (355)
T 3sre_A 81 KSGKILLMDLNEKEPA-VSE----LEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLH 155 (355)
T ss_dssp -CCEEEEEETTSSSCC-EEE----CEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEE
T ss_pred CCCeEEEEecCCCCCc-eEE----EEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEE
Confidence 6889999998742111 011 111110 111334567778776 3432 4444443 568888888754321111
Q ss_pred cccccccceeEEeccCCCCCCCeEEEeec-CCCeEEEEECCCCCEEEEEeC-----------------CCcEEEEecCCc
Q 009715 250 FPVIKDQTQFSVAHPRYSKSNPIARWHIC-QGSINSIAFSTDGTYLATVGR-----------------DGYLRVFDYSKE 311 (528)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~spdg~~l~s~~~-----------------dg~i~vwd~~~~ 311 (528)
+..+.+. -...+.+.+.++|.++++... .|.|..+|. +
T Consensus 156 ----------------------~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~ 211 (355)
T 3sre_A 156 ----------------------LKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--N 211 (355)
T ss_dssp ----------------------EEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--T
T ss_pred ----------------------EeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--C
Confidence 1111111 256889999999987776541 234444544 3
Q ss_pred eEEeeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCC-CeE--EEEeecCCCCeEEEEEec
Q 009715 312 QLICGGKSYYGALLCCAWSMDGKYILTGG-EDDLVQVWSMED-RKV--VAWGEGHNSWVSGVAFDS 373 (528)
Q Consensus 312 ~~~~~~~~~~~~v~~l~~sp~g~~l~sg~-~dg~v~vwd~~~-~~~--~~~~~~h~~~V~~v~f~p 373 (528)
+...... .-...+.++|+||++.|..+. ..+.|..|+++. ++. ...+ ......-.++.++
T Consensus 212 ~~~~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~ 275 (355)
T 3sre_A 212 DVRVVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDP 275 (355)
T ss_dssp CCEEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECT
T ss_pred eEEEeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeC
Confidence 3222222 234568899999998777664 478899999864 322 2223 2234456666665
No 305
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.71 E-value=0.035 Score=56.21 Aligned_cols=156 Identities=12% Similarity=0.112 Sum_probs=94.3
Q ss_pred ceeEEEEeeC-CCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEe-e---cCCCeEEEE
Q 009715 212 RCTSVTWVPG-GDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWH-I---CQGSINSIA 286 (528)
Q Consensus 212 ~v~~l~~~p~-g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---h~~~v~~l~ 286 (528)
....|+|+|. ..+++++-...+.|++.|+... .+..+- . .......|+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~---------------------------~v~~l~~~~~~~~~~p~~ia 192 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR---------------------------MLSSPLNINTIPTNRIRSIA 192 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTT---------------------------EEEEEECCTTSSCSBEEEEE
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCC---------------------------EEEEEEccCccccCCCcEEE
Confidence 4678999983 4435555554567888887641 111110 0 013578999
Q ss_pred E-------CCCCCEEEEEeCCC-------cEEEEecCC-ceEE-----eeecccCCCeEEEEEcC-CCCEEEEEeCCCcE
Q 009715 287 F-------STDGTYLATVGRDG-------YLRVFDYSK-EQLI-----CGGKSYYGALLCCAWSM-DGKYILTGGEDDLV 345 (528)
Q Consensus 287 ~-------spdg~~l~s~~~dg-------~i~vwd~~~-~~~~-----~~~~~~~~~v~~l~~sp-~g~~l~sg~~dg~v 345 (528)
| ++++.+|+++...+ .|.+++... ++.. ..+... .....++++| ++.++++-..++.|
T Consensus 193 ~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V 271 (496)
T 3kya_A 193 FNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQV 271 (496)
T ss_dssp ECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEE
T ss_pred EeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEE
Confidence 9 99999777766543 256665443 1211 111112 2345778899 45556666678889
Q ss_pred EEEECC-------CCeE-----------EEE-ee-cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEc
Q 009715 346 QVWSME-------DRKV-----------VAW-GE-GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDL 405 (528)
Q Consensus 346 ~vwd~~-------~~~~-----------~~~-~~-~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~ 405 (528)
..+|++ ++.. ... +. +...+...|+|+| +|+ .++++-...++|+.+|.
T Consensus 272 ~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p-------~G~-----~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 272 FRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHP-------TGK-----YAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECT-------TSS-----EEEEEETTTTEEEEEEE
T ss_pred EEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcC-------CCC-----EEEEEeCCCCEEEEEec
Confidence 999987 4443 111 11 2345678999999 882 35666677889999765
Q ss_pred cC
Q 009715 406 EM 407 (528)
Q Consensus 406 ~~ 407 (528)
..
T Consensus 340 dg 341 (496)
T 3kya_A 340 DE 341 (496)
T ss_dssp ET
T ss_pred CC
Confidence 43
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.52 E-value=0.32 Score=45.56 Aligned_cols=104 Identities=13% Similarity=0.066 Sum_probs=56.5
Q ss_pred CCCEEEEEeCC-----CcEEEEecCCceEEe--eecccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeEEE
Q 009715 290 DGTYLATVGRD-----GYLRVFDYSKEQLIC--GGKSYYGALLCCAWSMDGKYILTGGED-----DLVQVWSMEDRKVVA 357 (528)
Q Consensus 290 dg~~l~s~~~d-----g~i~vwd~~~~~~~~--~~~~~~~~v~~l~~sp~g~~l~sg~~d-----g~v~vwd~~~~~~~~ 357 (528)
+++.++.|+.+ ..+.+||+.+.+-.. .+........++.+ ++++++.|+.+ ..+.+||+.+.+-..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 56666666643 358899988765332 22211111222222 67777777654 458899988764322
Q ss_pred E--eecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC-----CeEEEEEccCCeE
Q 009715 358 W--GEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD-----TRLLLWDLEMDEI 410 (528)
Q Consensus 358 ~--~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D-----~~i~lwd~~~~~~ 410 (528)
. +.........+.+ ++ .+++.|+.+ ..+.+||+.+.+-
T Consensus 190 ~~~~p~~r~~~~~~~~---------~~------~i~v~GG~~~~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 190 VTPMATKRSGAGVALL---------ND------HIYVVGGFDGTAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp ECCCSSCCBSCEEEEE---------TT------EEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCCCCcccccceEEEE---------CC------EEEEEeCCCCCcccceEEEEeCCCCcE
Confidence 2 2111111222333 44 677777764 4578888877654
No 307
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.45 E-value=0.14 Score=50.28 Aligned_cols=108 Identities=14% Similarity=0.117 Sum_probs=73.2
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCceEEeeecc----cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe---------
Q 009715 288 STDGTYLATVGRDGYLRVFDYSKEQLICGGKS----YYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRK--------- 354 (528)
Q Consensus 288 spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~--------- 354 (528)
+.++..++.+- ++.||..++..+...+.++. -...+..+..+|+|++||..+ +..|.|..+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 34677777764 47899888874332222221 133678899999999999885 5588898887321
Q ss_pred ---EEEEeec------CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC
Q 009715 355 ---VVAWGEG------HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 355 ---~~~~~~~------h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~ 407 (528)
..+.+.- ....|..+.|+| -|... ..|++-..|+.|++||+..
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHP-------l~~~d---s~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHP-------KSYRD---SCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECT-------TBGGG---CEEEEEETTSCEEEEETTC
T ss_pred cccceeEEEcCCcccCCCCceeEEEecc-------ccCCC---CeEEEEecCCEEEEEEccc
Confidence 1122221 256799999999 44111 4788889999999999986
No 308
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.31 E-value=0.62 Score=45.05 Aligned_cols=105 Identities=14% Similarity=0.158 Sum_probs=59.6
Q ss_pred CceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC
Q 009715 211 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD 290 (528)
Q Consensus 211 ~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd 290 (528)
.....|+|.|+|. |+++..+|.|++++.. +. ..+.... .+.........|+|+|+
T Consensus 29 ~~P~~ia~~pdG~--l~V~e~~g~I~~~d~~--G~--~~~~~~~-------------------v~~~g~~g~~gia~~pd 83 (354)
T 3a9g_A 29 EVPWSIAPLGGGR--YLVTERPGRLVLISPS--GK--KLVASFD-------------------VANVGEAGLLGLALHPE 83 (354)
T ss_dssp SCEEEEEEEETTE--EEEEETTTEEEEECSS--CE--EEEEECC-------------------CCCSTTCSEEEEEECTT
T ss_pred CCCeEEEEcCCCe--EEEEeCCCEEEEEeCC--Cc--eEeeccc-------------------eeecCCCceeeEEeCCC
Confidence 3567899999997 5555667999988632 21 1111000 00011256789999997
Q ss_pred ---CCEEEEEeC----C----CcEEEEecCCc-------eEE-eeecc-cCCCeEEEEEcCCCCEEEEEe
Q 009715 291 ---GTYLATVGR----D----GYLRVFDYSKE-------QLI-CGGKS-YYGALLCCAWSMDGKYILTGG 340 (528)
Q Consensus 291 ---g~~l~s~~~----d----g~i~vwd~~~~-------~~~-~~~~~-~~~~v~~l~~sp~g~~l~sg~ 340 (528)
+..|.++.. + ..|..|+.... +.+ ..+.. .......|+|.|||.+.++-+
T Consensus 84 f~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 84 FPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp TTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred CCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 445555433 2 56777777643 112 11221 111235699999998766643
No 309
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.16 E-value=0.81 Score=42.90 Aligned_cols=63 Identities=13% Similarity=0.159 Sum_probs=36.6
Q ss_pred CCCEEEEEeCC------CcEEEEecCCceEEee--ecccCCCeEEEEEcCCCCEEEEEeC---------CCcEEEEECCC
Q 009715 290 DGTYLATVGRD------GYLRVFDYSKEQLICG--GKSYYGALLCCAWSMDGKYILTGGE---------DDLVQVWSMED 352 (528)
Q Consensus 290 dg~~l~s~~~d------g~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~g~~l~sg~~---------dg~v~vwd~~~ 352 (528)
++++++.|+.+ ..+.+||+.+.+-... +.........+. -++++++.|+. -..+.+||+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 56677777655 4588999987754322 111111112222 26677777653 34588999987
Q ss_pred Ce
Q 009715 353 RK 354 (528)
Q Consensus 353 ~~ 354 (528)
.+
T Consensus 179 ~~ 180 (306)
T 3ii7_A 179 ET 180 (306)
T ss_dssp TE
T ss_pred Ce
Confidence 64
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.01 E-value=0.25 Score=46.55 Aligned_cols=104 Identities=15% Similarity=0.091 Sum_probs=57.1
Q ss_pred CCCEEEEEeC---------CCcEEEEecCCceEEee--ecccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCC
Q 009715 290 DGTYLATVGR---------DGYLRVFDYSKEQLICG--GKSYYGALLCCAWSMDGKYILTGGED-----DLVQVWSMEDR 353 (528)
Q Consensus 290 dg~~l~s~~~---------dg~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~g~~l~sg~~d-----g~v~vwd~~~~ 353 (528)
++++++.|+. -..+.+||+.+.+-... +....... ++... ++++++.|+.+ ..+.+||+.+.
T Consensus 149 ~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 149 NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNH-GLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE-TTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcc-eEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence 5566666653 34588999987754322 11111111 22222 66777777653 36889999876
Q ss_pred eEEE--EeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC-----CeEEEEEccCCeE
Q 009715 354 KVVA--WGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD-----TRLLLWDLEMDEI 410 (528)
Q Consensus 354 ~~~~--~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D-----~~i~lwd~~~~~~ 410 (528)
+-.. .+.........+.+ ++ .+++.|+.+ ..+.+||+.+.+-
T Consensus 227 ~W~~~~~~p~~r~~~~~~~~---------~~------~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 227 EWKMVSPMPWKGVTVKCAAV---------GS------IVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp EEEECCCCSCCBSCCEEEEE---------TT------EEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred cEEECCCCCCCccceeEEEE---------CC------EEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 4221 12111122233333 44 678888754 5688899887654
No 311
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.00 E-value=0.19 Score=47.22 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=56.7
Q ss_pred CCCEEEEEeCC-------CcEEEEecCCceEEee--ecccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeE
Q 009715 290 DGTYLATVGRD-------GYLRVFDYSKEQLICG--GKSYYGALLCCAWSMDGKYILTGGED-----DLVQVWSMEDRKV 355 (528)
Q Consensus 290 dg~~l~s~~~d-------g~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~g~~l~sg~~d-----g~v~vwd~~~~~~ 355 (528)
+++.++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+++.+-
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 55666666542 3588999987654322 2111111222222 67777777654 3688999987643
Q ss_pred EEE--eecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCC-----eEEEEEccCCeE
Q 009715 356 VAW--GEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT-----RLLLWDLEMDEI 410 (528)
Q Consensus 356 ~~~--~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~-----~i~lwd~~~~~~ 410 (528)
... +.........+.+ ++ .+++.|+.++ .+.+||+.+.+-
T Consensus 233 ~~~~~~~~~r~~~~~~~~---------~~------~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 233 RQVADMNMCRRNAGVCAV---------NG------LLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp EEECCCSSCCBSCEEEEE---------TT------EEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred eeCCCCCCccccCeEEEE---------CC------EEEEECCcCCCcccccEEEEcCCCCeE
Confidence 221 1111111122222 55 6777777653 488888887654
No 312
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.91 E-value=1 Score=42.41 Aligned_cols=107 Identities=18% Similarity=0.139 Sum_probs=58.3
Q ss_pred CCCEEEEEeC-C-----CcEEEEecCCceEEee--ecccCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCeEE
Q 009715 290 DGTYLATVGR-D-----GYLRVFDYSKEQLICG--GKSYYGALLCCAWSMDGKYILTGGEDD-----LVQVWSMEDRKVV 356 (528)
Q Consensus 290 dg~~l~s~~~-d-----g~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~g~~l~sg~~dg-----~v~vwd~~~~~~~ 356 (528)
+++.++.|+. + ..+.+||+.+.+-... +........++.+ ++++++.|+.++ .+.+||+.+.+-.
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 5566677765 2 4689999987654322 1111111122222 677777877654 5888999876432
Q ss_pred EE--eecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC--------------CeEEEEEccCCeEEEE
Q 009715 357 AW--GEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD--------------TRLLLWDLEMDEIVVP 413 (528)
Q Consensus 357 ~~--~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D--------------~~i~lwd~~~~~~~~~ 413 (528)
.. +.........+.+ ++ .+++.|+.+ ..|.+||+.+.+-...
T Consensus 226 ~~~~~p~~r~~~~~~~~---------~~------~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 226 PFEAFPQERSSLSLVSL---------VG------TLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EECCCSSCCBSCEEEEE---------TT------EEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred ECCCCCCcccceeEEEE---------CC------EEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 22 1111112222333 45 577777753 2477889888765443
No 313
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.90 E-value=1.3 Score=42.66 Aligned_cols=101 Identities=18% Similarity=0.109 Sum_probs=61.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEecCCce-EEeeec---ccCCCeEEEEEcCC---CCEEEEEeC----C----Cc
Q 009715 280 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQ-LICGGK---SYYGALLCCAWSMD---GKYILTGGE----D----DL 344 (528)
Q Consensus 280 ~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~-~~~~~~---~~~~~v~~l~~sp~---g~~l~sg~~----d----g~ 344 (528)
.....|+|.|||+ |+++..++.|+++|. +++ .+..+. ........|+++|+ +..|.++.. + ..
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 5677999999997 555566799999974 454 222221 12356889999997 444544432 3 56
Q ss_pred EEEEECCCC-------eEE-EEeec-CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe
Q 009715 345 VQVWSMEDR-------KVV-AWGEG-HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG 395 (528)
Q Consensus 345 v~vwd~~~~-------~~~-~~~~~-h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s 395 (528)
|..|+.... +.+ ..+.. .......|+|.| || +++++.+
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-------DG------~Lyvt~G 153 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-------DG------MLYITTG 153 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-------TS------CEEEECC
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-------CC------cEEEEEC
Confidence 777876643 111 11221 112346799999 99 5666644
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.83 E-value=0.74 Score=43.06 Aligned_cols=104 Identities=13% Similarity=0.173 Sum_probs=55.3
Q ss_pred CCCEEEEEeCCC-----cEEEEecCCceEEee--ecccCCCeEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCeE
Q 009715 290 DGTYLATVGRDG-----YLRVFDYSKEQLICG--GKSYYGALLCCAWSMDGKYILTGGED-------DLVQVWSMEDRKV 355 (528)
Q Consensus 290 dg~~l~s~~~dg-----~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~g~~l~sg~~d-------g~v~vwd~~~~~~ 355 (528)
++..++.|+.++ .+.+||+.+.+-... +....... +++. -++++++.|+.+ ..+.+||+.+.+-
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 566777776553 577889887654322 11111111 2222 256677776542 3588999987643
Q ss_pred EE--EeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC-----CeEEEEEccCCeE
Q 009715 356 VA--WGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD-----TRLLLWDLEMDEI 410 (528)
Q Consensus 356 ~~--~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D-----~~i~lwd~~~~~~ 410 (528)
.. .+.........+.+ ++ .+++.|+.+ ..+.+||+.+.+-
T Consensus 186 ~~~~~~p~~r~~~~~~~~---------~~------~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVL---------NN------LLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp EEECCCSSCCBSCEEEEE---------TT------EEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred EECCCCccccccccEEEE---------CC------EEEEECCCCCCcccceEEEEeCCCCCE
Confidence 22 12111111222233 44 577777754 3577778776543
No 315
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.78 E-value=0.94 Score=43.71 Aligned_cols=50 Identities=12% Similarity=0.059 Sum_probs=29.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE------EEEeecCCCCeEEEEEec
Q 009715 323 ALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKV------VAWGEGHNSWVSGVAFDS 373 (528)
Q Consensus 323 ~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~------~~~~~~h~~~V~~v~f~p 373 (528)
....++| .+|.++++.-..+.|...+++.... ...+..-...+..+++.|
T Consensus 269 ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p 324 (352)
T 2ism_A 269 PPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGP 324 (352)
T ss_dssp CEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECT
T ss_pred CCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECC
Confidence 3456666 4666666665667777777654321 112212235688999999
No 316
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.73 E-value=0.76 Score=45.11 Aligned_cols=126 Identities=15% Similarity=0.194 Sum_probs=74.2
Q ss_pred CCCCCeEEEEecCCcEEEEEccccccccc-----ccee-eeeeeccCCcccCCceeEEEEeeCCCc--EEEEEeCCceEE
Q 009715 165 AKDGHDLLIGLNSGDVYSVSLRQQLQDVG-----KKLV-GAHHYNKDGSVNNSRCTSVTWVPGGDG--AFVVGHADGNLY 236 (528)
Q Consensus 165 ~~~~~~l~~g~~~G~v~iwd~~~~~~~~~-----~~~~-~~~~~~~~~~~h~~~v~~l~~~p~g~~--~l~tg~~dg~v~ 236 (528)
+++|++|++-+.. +|.|..+........ ..+. ......+.......+|..+.|+|-+.+ .|++-..|+.|+
T Consensus 74 SpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir 152 (452)
T 3pbp_A 74 STSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTIT 152 (452)
T ss_dssp CTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEE
T ss_pred CCCCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEE
Confidence 8899999887554 899998873211111 1111 111221111124678999999996653 799999999999
Q ss_pred EEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEe--CCCcEEEEe
Q 009715 237 VYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVG--RDGYLRVFD 307 (528)
Q Consensus 237 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~--~dg~i~vwd 307 (528)
+||+..... ... ..... ....-...+...|.+++|.+++-.|.... ..|.|+-..
T Consensus 153 ~yDl~~s~~-~P~--~L~k~-------------~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 153 MFDILNSQE-KPI--VLNKP-------------NNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EEETTCTTS-CCE--EESCC-------------CSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred EEEcccCCC-CCc--chhcc-------------ccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 999986211 111 11100 00111122336788999999876666644 778776554
No 317
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.62 E-value=0.11 Score=46.23 Aligned_cols=174 Identities=15% Similarity=0.106 Sum_probs=93.8
Q ss_pred CCEEEEEeCCCcEEEEecCCce-------EEeeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCC
Q 009715 291 GTYLATVGRDGYLRVFDYSKEQ-------LICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHN 363 (528)
Q Consensus 291 g~~l~s~~~dg~i~vwd~~~~~-------~~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~ 363 (528)
...|+....| .++.=...++. ..+.-++--..+..++|+|+|.+.++ .+|.++-.+..+......+. -.
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~-s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMG-RA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHH-HC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccc-cc
Confidence 3456666666 55555544332 11111211246779999999997777 67777766665422211111 11
Q ss_pred CC--------eEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCCCCCeecCCCCCccCC
Q 009715 364 SW--------VSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWD 435 (528)
Q Consensus 364 ~~--------V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d 435 (528)
.. -.++.|+| +| .+.++ .|+.|.-++-.+... ..|-
T Consensus 80 t~IG~~Gw~~F~a~~fD~-------~G------~LYav--~dG~iyr~~pP~~~~---------------------~~Wl 123 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDP-------NG------YLYAV--SKDKLYKASPPQSDT---------------------DNWI 123 (236)
T ss_dssp EEEECSCGGGCSEEEECT-------TS------CEEEE--ETTEEEEESCCCSTT---------------------CCHH
T ss_pred cEecccccccceEEEECC-------CC------CEEEe--CCCEEEEeCCCcCCC---------------------Ccee
Confidence 11 47899999 99 44444 668887666321100 0110
Q ss_pred ce-eeeecCCCCceeeecCCCCceEEeecCCCCeEEEEEeCCe-EEEEECCCeEEEEeCCCCcccc-------CC----C
Q 009715 436 NV-CPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQES-VLTVCREGHIKIWMRPGVAESQ-------SS----S 502 (528)
Q Consensus 436 ~~-~~~g~~~~~~~~~d~~~~~~~~~~~~h~~~V~~l~~s~d~-l~t~s~Dg~i~iW~~~~~~~~~-------~~----~ 502 (528)
.. ..++ ..--..+..|.|.|++ |.... |+.++-+..+...... .. +
T Consensus 124 ~~a~~vg--------------------~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~ 182 (236)
T 1tl2_A 124 ARATEVG--------------------SGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWD 182 (236)
T ss_dssp HHSEEEE--------------------CSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGG
T ss_pred ccccEec--------------------cCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcc
Confidence 00 0000 0112457899999997 66666 9987665555332110 01 1
Q ss_pred ccceEEEccCCceEEEeeeeccccc
Q 009715 503 SETVLSTSSKDKPLLSSKVVTSSYR 527 (528)
Q Consensus 503 ~~~vl~~spd~~~l~s~~~~gs~~~ 527 (528)
.-.++.+++++...++. +|-+||
T Consensus 183 ~yr~l~f~~~G~l~~v~--~g~~Y~ 205 (236)
T 1tl2_A 183 TFKFLFFSSVGTLFGVQ--GGKFYE 205 (236)
T ss_dssp GEEEEEECTTSCEEEEE--TTEEEE
T ss_pred eEEEEEECCCCcEEEEe--CCeEEe
Confidence 11236789999888766 666654
No 318
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.56 E-value=0.52 Score=44.40 Aligned_cols=105 Identities=14% Similarity=0.101 Sum_probs=57.7
Q ss_pred CCCEEEEEeCC-----CcEEEEecCCceEEee--ecccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeEEE
Q 009715 290 DGTYLATVGRD-----GYLRVFDYSKEQLICG--GKSYYGALLCCAWSMDGKYILTGGED-----DLVQVWSMEDRKVVA 357 (528)
Q Consensus 290 dg~~l~s~~~d-----g~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~g~~l~sg~~d-----g~v~vwd~~~~~~~~ 357 (528)
++++++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+++.+-..
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF 245 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence 56667776654 4588999987654322 1111111222222 67777777654 468999998764322
Q ss_pred E--eecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC-----CeEEEEEccCCeEE
Q 009715 358 W--GEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD-----TRLLLWDLEMDEIV 411 (528)
Q Consensus 358 ~--~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D-----~~i~lwd~~~~~~~ 411 (528)
. +.........+.+ ++ .+++.|+.+ ..|.+||+.+.+-.
T Consensus 246 ~~~~p~~r~~~~~~~~---------~~------~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 246 VAPMKHRRSALGITVH---------QG------RIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp CCCCSSCCBSCEEEEE---------TT------EEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CCCCCCCccceEEEEE---------CC------EEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 1 1111111222222 55 677777754 45778888776543
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.34 E-value=2.1 Score=41.16 Aligned_cols=55 Identities=15% Similarity=0.063 Sum_probs=30.9
Q ss_pred EEEEECCCCCEEEEEeCC-------------CcEEEEecCCce------------EEeee-cccCCCeEEEEEcC-CCCE
Q 009715 283 NSIAFSTDGTYLATVGRD-------------GYLRVFDYSKEQ------------LICGG-KSYYGALLCCAWSM-DGKY 335 (528)
Q Consensus 283 ~~l~~spdg~~l~s~~~d-------------g~i~vwd~~~~~------------~~~~~-~~~~~~v~~l~~sp-~g~~ 335 (528)
..|.|.|||.++++.+.. |.|.-++.+..- ....+ .++ .....++|+| ++++
T Consensus 133 ~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l 211 (353)
T 2g8s_A 133 GRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNAL 211 (353)
T ss_dssp CCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEE
T ss_pred ccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCE
Confidence 579999999655554332 456666665210 00111 122 2367899999 6665
Q ss_pred EEE
Q 009715 336 ILT 338 (528)
Q Consensus 336 l~s 338 (528)
+++
T Consensus 212 ~~~ 214 (353)
T 2g8s_A 212 WLN 214 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 320
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.21 E-value=0.21 Score=44.42 Aligned_cols=109 Identities=12% Similarity=0.166 Sum_probs=62.4
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG 291 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg 291 (528)
.+.+++|+|+|. +.++ .+|.++-.+..+... ..-+.. ...+... -| ..-.++.|.|+|
T Consensus 42 ~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~-~~W~~s-----~t~IG~~---------Gw----~~F~a~~fD~~G 99 (236)
T 1tl2_A 42 NFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDN-DNWMGR-----AKKIGNG---------GW----NQFQFLFFDPNG 99 (236)
T ss_dssp TCSEEEECTTSC-EEEE--ETTEEEEESCCCSTT-CCHHHH-----CEEEECS---------CG----GGCSEEEECTTS
T ss_pred cceeEEECCCcc-EEEE--eCCeEEEECCCCCCc-cccccc-----ccEeccc---------cc----ccceEEEECCCC
Confidence 677999999998 5555 677766555432111 000000 0000000 00 113689999999
Q ss_pred CEEEEEeCCCcEEEEecCCceE-------EeeecccCCCeEEEEEcCCCCEEEEEeCCCcEE
Q 009715 292 TYLATVGRDGYLRVFDYSKEQL-------ICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQ 346 (528)
Q Consensus 292 ~~l~s~~~dg~i~vwd~~~~~~-------~~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~ 346 (528)
.+.++ .||.|.-++..+... ......--..+..|.+.|+|.+.++. |+.++
T Consensus 100 ~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 100 YLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp CEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 88877 569888787643111 01111112457899999999877777 67654
No 321
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.16 E-value=1.9 Score=41.47 Aligned_cols=161 Identities=14% Similarity=0.201 Sum_probs=91.2
Q ss_pred ceeEEEEeeCCCcEEEEEe-------------CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeec
Q 009715 212 RCTSVTWVPGGDGAFVVGH-------------ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHIC 278 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~-------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 278 (528)
.+.+++..|+|. +++++ .+|.|.++|..+.......+..... . +...
T Consensus 51 G~EDi~~~~~G~--~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~--~----------------~~~~ 110 (355)
T 3sre_A 51 GSEDLEILPNGL--AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGN--T----------------LDIS 110 (355)
T ss_dssp CCCEEEECTTSE--EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECS--S----------------CCGG
T ss_pred CcceeEEcCCCe--EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCC--C----------------CCcC
Confidence 467788888775 45554 6899999998742221111110000 0 0001
Q ss_pred CCCeEEEEECC--CCC-EEEEEeC---CCcEEEEecCCc--e--EEeeeccc-CCCeEEEEEcCCCCEEEEEeC------
Q 009715 279 QGSINSIAFST--DGT-YLATVGR---DGYLRVFDYSKE--Q--LICGGKSY-YGALLCCAWSMDGKYILTGGE------ 341 (528)
Q Consensus 279 ~~~v~~l~~sp--dg~-~l~s~~~---dg~i~vwd~~~~--~--~~~~~~~~-~~~v~~l~~sp~g~~l~sg~~------ 341 (528)
......|.+.+ ++. +|+++.. +..|.+|+++.+ . .+..+.+. ....+.+.+.++|.+.++...
T Consensus 111 ~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~ 190 (355)
T 3sre_A 111 SFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPY 190 (355)
T ss_dssp GCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHH
T ss_pred ceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcc
Confidence 23455677655 454 4555432 456777776542 2 22333322 245789999999987777541
Q ss_pred -----------CCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccC
Q 009715 342 -----------DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 342 -----------dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~ 407 (528)
.+.|.-+|. ++.. .+...-...+.++|+| ||+ .++++-+..++|..||+..
T Consensus 191 ~~~~e~~~~~~~g~vyr~d~--~~~~-~~~~~l~~pNGia~sp-------Dg~-----~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 191 LKSWEMHLGLAWSFVTYYSP--NDVR-VVAEGFDFANGINISP-------DGK-----YVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp HHHHHHHTTCCCEEEEEECT--TCCE-EEEEEESSEEEEEECT-------TSS-----EEEEEEGGGTEEEEEEECT
T ss_pred cccchhhccCCccEEEEEEC--CeEE-EeecCCcccCcceECC-------CCC-----EEEEEeCCCCeEEEEEECC
Confidence 234555554 3322 2222334578999999 983 4556666788999999864
No 322
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.89 E-value=2.7 Score=39.80 Aligned_cols=209 Identities=11% Similarity=0.114 Sum_probs=124.6
Q ss_pred cEEEEeCCCCCCC------------CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEe
Q 009715 152 AIFISDLNSQDKD------------AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWV 219 (528)
Q Consensus 152 ~i~v~~~~~~~~~------------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 219 (528)
.+.+.|+..+... +|..+.++.-. ...++++|++++. ++ .... ....|.--+|-
T Consensus 50 ~VvIiDl~n~~~~~Rrpi~AdsAIMnP~~~ViALra-g~~LQiFnletK~-----kl-ks~~-------~~e~VvfWkWi 115 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKS-----KM-KAHT-------MTDDVTFWKWI 115 (365)
T ss_dssp EEEEEETTSTTSCEEEECCCSEEEECSSSSEEEEEE-TTEEEEEETTTTE-----EE-EEEE-------CSSCEEEEEEC
T ss_pred EEEEEECCCCCCccccccccceeeeCCCccEEEEec-CCeEEEechHHhh-----hh-ccee-------cCCccEEEEec
Confidence 4677777765433 88888888775 6789999998732 11 1122 34578888887
Q ss_pred eCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeec----CCCeEEEEECCCCCEEE
Q 009715 220 PGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHIC----QGSINSIAFSTDGTYLA 295 (528)
Q Consensus 220 p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~spdg~~l~ 295 (528)
.+.. |+--.. ..|+-|++..+ ..|++.++-| ...|..-..+++.++++
T Consensus 116 s~~~--L~lVT~-taVyHWs~~~~-------------------------s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~ 167 (365)
T 2xzh_A 116 SLNT--VALVTD-NAVYHWSMEGE-------------------------SQPVKMFDRHSSLAGCQIINYRTDAKQKWLL 167 (365)
T ss_dssp SSSE--EEEEES-SEEEEEESSTT-------------------------CCCEEEEECCGGGTTCEEEEEEECTTSCEEE
T ss_pred CCCe--EEEEcC-CcEEEEcccCC-------------------------CCCceeeecchhcccceEEEEEECCCCCEEE
Confidence 7665 444442 47999998742 2344444443 24566777788888877
Q ss_pred EEeC-------CCcEEEEecCCceEEeeecccCCCeEEEEEcCC---CCEEEEEeC---CCcEEEEECCCC---e-----
Q 009715 296 TVGR-------DGYLRVFDYSKEQLICGGKSYYGALLCCAWSMD---GKYILTGGE---DDLVQVWSMEDR---K----- 354 (528)
Q Consensus 296 s~~~-------dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~---g~~l~sg~~---dg~v~vwd~~~~---~----- 354 (528)
..+- .|.+.+|..+.+. -+.+.+|......+...-+ ..+++.+.. .+.++|-++... .
T Consensus 168 l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~k 246 (365)
T 2xzh_A 168 LTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPK 246 (365)
T ss_dssp EEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCC
T ss_pred EEeEeccCCccceeEEEEeecccc-cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCccc
Confidence 6542 3678899887543 3556666443322222111 113333332 257888887432 1
Q ss_pred -EEEEeec---CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 355 -VVAWGEG---HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 355 -~~~~~~~---h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
.+..+.. -.+-..++..++. .| .+...+.-|.|.+||+.++.++..-+-
T Consensus 247 k~vdi~fppea~~DFPVamqvs~k------yg-------viyviTK~G~ihlyDleTgt~i~~nrI 299 (365)
T 2xzh_A 247 KAVDVFFPPEAQNDFPVAMQISEK------HD-------VVFLITKYGYIHLYDLETGTCIYMNRI 299 (365)
T ss_dssp EEEEECCCTTCTTCCEEEEEEETT------TT-------EEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred ccceeeCCccccCCceEEEEeccc------CC-------EEEEEeCCcEEEEEEcccCcEEEEecc
Confidence 1111111 1233345555541 33 667777889999999999998865543
No 323
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.84 E-value=2.6 Score=39.56 Aligned_cols=63 Identities=17% Similarity=0.252 Sum_probs=35.6
Q ss_pred CCCEEEEEeC------CCcEEEEecCCceEEee--ecccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCe
Q 009715 290 DGTYLATVGR------DGYLRVFDYSKEQLICG--GKSYYGALLCCAWSMDGKYILTGGED-----DLVQVWSMEDRK 354 (528)
Q Consensus 290 dg~~l~s~~~------dg~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~g~~l~sg~~d-----g~v~vwd~~~~~ 354 (528)
++++++.|+. -..+.+||+.+.+-... +....... +++. -++++++.|+.+ ..+.+||+++.+
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMF-GVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccc-eEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 5666666653 23589999987754322 11111111 2222 266777777653 357789988764
No 324
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.62 E-value=5.8 Score=42.48 Aligned_cols=220 Identities=15% Similarity=0.156 Sum_probs=118.6
Q ss_pred cceeeeCCCccEEEEeCCCcEEEEeCCC------CCCC---------CCCCCeEEEEecCCcEEEEEcccccccccccee
Q 009715 133 MTNTNFDGKGTYIIFNVGDAIFISDLNS------QDKD---------AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLV 197 (528)
Q Consensus 133 ~~~~~~~~~g~~~~~~~~~~i~v~~~~~------~~~~---------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~ 197 (528)
...+.-|.+|.+|+-. ...+..+|-.. .... ......|.+|+.+| +..||..+..
T Consensus 24 V~~I~qD~~G~lWigT-~~GL~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~-------- 93 (758)
T 3ott_A 24 VSCFLQDSEGLIWIGS-NKGLFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTYLYMGTDNG-ILVYNYRADR-------- 93 (758)
T ss_dssp EEEEEECTTSCEEEEE-SSCEEEECSSCEEECSCTTSTTSSCEEEEEEETTTEEEEEETTE-EEEEETTTTE--------
T ss_pred EEEEEECCCCCEEEEE-CCCccccCCCceEEEEccCCCCCceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCE--------
Confidence 3345556778777654 45566555321 0000 11234677887765 6788876521
Q ss_pred eeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEee
Q 009715 198 GAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHI 277 (528)
Q Consensus 198 ~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (528)
|..........|.++.. .+| .|..+..+ -|..|+..+.. ...+..... ..
T Consensus 94 ----f~~~~~~~~~~i~~i~~-~~g--~lWigt~~-Gl~~~~~~~~~--~~~~~~~~~--------------------~l 143 (758)
T 3ott_A 94 ----YEQPETDFPTDVRTMAL-QGD--TLWLGALN-GLYTYQLQSRK--LTSFDTRRN--------------------GL 143 (758)
T ss_dssp ----ECCCSCCCCSCEEEEEE-ETT--EEEEEETT-EEEEEETTTCC--EEEECHHHH--------------------CC
T ss_pred ----EECcccCCCceEEEEEe-cCC--cEEEEcCC-cceeEeCCCCe--EEEeccCCC--------------------Cc
Confidence 11100012235777654 455 46666666 57788865421 111100000 00
Q ss_pred cCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeee-ccc----CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 009715 278 CQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGG-KSY----YGALLCCAWSMDGKYILTGGEDDLVQVWSMED 352 (528)
Q Consensus 278 h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~----~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~ 352 (528)
....|.++....++.+.+ ++.+ -|..+|..+++..... ... ...|.++...+++..|..|.. +-+..+|..+
T Consensus 144 ~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~ 220 (758)
T 3ott_A 144 PNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPST 220 (758)
T ss_dssp SCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTT
T ss_pred CCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCC
Confidence 124678888887777554 5554 4778888776543211 111 124788888777765555554 4578899877
Q ss_pred CeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeE
Q 009715 353 RKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEI 410 (528)
Q Consensus 353 ~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~ 410 (528)
++......-....|.++..+. +| .|..|+. +-|.++|..+++.
T Consensus 221 ~~~~~~~~l~~~~i~~i~~d~-------~g-------~lWigT~-~Gl~~~~~~~~~~ 263 (758)
T 3ott_A 221 GQIKQTEAFHNNSIKSLALDG-------NG-------DLLAGTD-NGLYVYHNDTTPL 263 (758)
T ss_dssp TEEEEEEEEEEEEEEEEEECT-------TC-------CEEEEET-TEEEEECCTTSCC
T ss_pred CeEEeccCCCCCeEEEEEEcC-------CC-------CEEEEeC-CceeEEecCCCcE
Confidence 654322111234588888877 77 3444454 4578888766543
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.59 E-value=1.4 Score=41.23 Aligned_cols=104 Identities=13% Similarity=0.092 Sum_probs=56.2
Q ss_pred CCCEEEEEeCC-----CcEEEEecCCceEEee--ecccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeEEE
Q 009715 290 DGTYLATVGRD-----GYLRVFDYSKEQLICG--GKSYYGALLCCAWSMDGKYILTGGED-----DLVQVWSMEDRKVVA 357 (528)
Q Consensus 290 dg~~l~s~~~d-----g~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~g~~l~sg~~d-----g~v~vwd~~~~~~~~ 357 (528)
+++.++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+-..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 56666666543 3588999987654322 1111111222222 66777777654 458899988764321
Q ss_pred --EeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC-----CeEEEEEccCCeE
Q 009715 358 --WGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD-----TRLLLWDLEMDEI 410 (528)
Q Consensus 358 --~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D-----~~i~lwd~~~~~~ 410 (528)
.+......-..+.+ ++ .+++.|+.+ ..+.+||+.+.+-
T Consensus 199 ~~~~p~~r~~~~~~~~---------~~------~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL---------HN------CIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp CCCCSSCCBSCEEEEE---------TT------EEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCCCCCccccceEEEE---------CC------EEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 11111111222333 44 577777764 4588888877653
No 326
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.99 E-value=5.2 Score=39.43 Aligned_cols=208 Identities=12% Similarity=0.134 Sum_probs=127.3
Q ss_pred cEEEEeCCCCCCC------------CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEe
Q 009715 152 AIFISDLNSQDKD------------AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWV 219 (528)
Q Consensus 152 ~i~v~~~~~~~~~------------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 219 (528)
.+.|.|+..+... +|..+.++.-. ...+++||++++. ++ .... ....|.--+|-
T Consensus 49 ~vvIiDl~~~~~~~rrpi~AdsAIMnP~~~iiALra-g~~lQiFnle~K~-----kl-ks~~-------~~e~VvfWkWi 114 (494)
T 1bpo_A 49 QVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKS-----KM-KAHT-------MTDDVTFWKWI 114 (494)
T ss_dssp EEEEEETTSTTSCEEEECCCSEEEECSSSSCEEEEE-TTEEEEEETTTTE-----EE-EEEE-------CSSCCCEEEEE
T ss_pred eEEEEECCCCCcceecccccceeeeCCCCcEEEEec-CCeEEEEchHHhh-----hh-ccee-------cCCCceEEEec
Confidence 4677777765433 88888888775 6799999998732 11 1122 33468888898
Q ss_pred eCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeec----CCCeEEEEECCCCCEEE
Q 009715 220 PGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHIC----QGSINSIAFSTDGTYLA 295 (528)
Q Consensus 220 p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~spdg~~l~ 295 (528)
.+.. |+-.. +..|+-|++..+ ..|++.++-| ...|..-..+++.++++
T Consensus 115 s~~~--l~lVT-~taVyHWsi~~~-------------------------s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~ 166 (494)
T 1bpo_A 115 SLNT--VALVT-DNAVYHWSMEGE-------------------------SQPVKMFDRHSSLAGCQIINYRTDAKQKWLL 166 (494)
T ss_dssp ETTE--EEEEC-SSEEEEEESSSS-------------------------CCCEEEEECCGGGTTCEEEEEEECTTSSEEE
T ss_pred CCCe--EEEEc-CCeeEEecccCC-------------------------CCchhheecchhcccceEEEEEECCCCCeEE
Confidence 7765 44444 348999998642 2344554443 24577777788888877
Q ss_pred EEeC-------CCcEEEEecCCceEEeeecccCCCeEEEEEcCCC---CEEEEEeCC---CcEEEEECCCC---------
Q 009715 296 TVGR-------DGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDG---KYILTGGED---DLVQVWSMEDR--------- 353 (528)
Q Consensus 296 s~~~-------dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g---~~l~sg~~d---g~v~vwd~~~~--------- 353 (528)
..+- .|.+.+|..+.+. -+.+.+|......+...-+. .++..+... +.++|-++...
T Consensus 167 l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~k 245 (494)
T 1bpo_A 167 LTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPK 245 (494)
T ss_dssp EEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCC
T ss_pred EEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccc
Confidence 6542 3678889887543 34566675544333332111 234444432 68888888532
Q ss_pred eEEEEee---cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEee
Q 009715 354 KVVAWGE---GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLR 415 (528)
Q Consensus 354 ~~~~~~~---~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 415 (528)
+.+..+. .-.+-..++..++. .| .+...+.-|.|.+||+.++.++..-+
T Consensus 246 k~vdv~fppe~~~DFPvamqvs~k------yg-------viyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 246 KAVDVFFPPEAQNDFPVAMQISEK------HD-------VVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp EEEECCCCTTSTTCCEEEEEEETT------TT-------EEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eeeeeeCCcccccCceeEEEeccc------CC-------EEEEEecCceEEEEecccceeeeeec
Confidence 1111111 11333445666652 34 66777788999999999999886554
No 327
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.28 E-value=2.4 Score=48.11 Aligned_cols=226 Identities=11% Similarity=0.090 Sum_probs=118.8
Q ss_pred CccEEEEeCCCcEEEEeCCCCCCC-------------CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCc
Q 009715 141 KGTYIIFNVGDAIFISDLNSQDKD-------------AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGS 207 (528)
Q Consensus 141 ~g~~~~~~~~~~i~v~~~~~~~~~-------------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 207 (528)
...+++...++.+.|+++....+. --+.+.|+.-+ +..|+.|++... ..|. ..|.+...
T Consensus 76 ~~~iiALrag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~-s~P~------k~fdR~~~ 147 (1630)
T 1xi4_A 76 ASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT-DNAVYHWSMEGE-SQPV------KMFDRHSS 147 (1630)
T ss_pred CcceEEEecCCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEc-CCeEEEeccCCC-CccH------HHHhcchh
Confidence 456666666777777777654333 12233333333 237999999641 1111 12233222
Q ss_pred ccCCceeEEEEeeCCCcEEEEEe------CCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCC
Q 009715 208 VNNSRCTSVTWVPGGDGAFVVGH------ADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGS 281 (528)
Q Consensus 208 ~h~~~v~~l~~~p~g~~~l~tg~------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 281 (528)
.....|..-..+++.+..+++|= -.|.+.+|..+.. ..+.+.+|.+.
T Consensus 148 L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~---------------------------~sQ~iegha~~ 200 (1630)
T 1xi4_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---------------------------VSQPIEGHAAS 200 (1630)
T ss_pred cccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc---------------------------cchhhhHhHhh
Confidence 23567888888899984444442 4578888888652 11112222222
Q ss_pred eEEEEEC--C-CCCEEEEEeC---CCcEEEEecCCc---eEE------eeecc---cCCCeEEEEEcCCCCEEEEEeCCC
Q 009715 282 INSIAFS--T-DGTYLATVGR---DGYLRVFDYSKE---QLI------CGGKS---YYGALLCCAWSMDGKYILTGGEDD 343 (528)
Q Consensus 282 v~~l~~s--p-dg~~l~s~~~---dg~i~vwd~~~~---~~~------~~~~~---~~~~v~~l~~sp~g~~l~sg~~dg 343 (528)
...+... + ....++.+.. .+.++|.++... ... ..+.. -.+-...+..++.-..+..-..-|
T Consensus 201 F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G 280 (1630)
T 1xi4_A 201 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG 280 (1630)
T ss_pred hheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCc
Confidence 2222221 1 1112222211 267888887532 110 01111 123334567777666777777889
Q ss_pred cEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEe
Q 009715 344 LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPL 414 (528)
Q Consensus 344 ~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 414 (528)
.|.+||+.++.++..-+-....|...+.+. ...| ++.....|.|.--.+.....+.-+
T Consensus 281 ~~~~~d~~t~~~i~~~ris~~~iF~~~~~~-----~~~g--------~~~vnr~G~vl~v~v~~~~iv~yi 338 (1630)
T 1xi4_A 281 YIHLYDLETGTCIYMNRISGETIFVTAPHE-----ATAG--------IIGVNRKGQVLSVCVEEENIIPYI 338 (1630)
T ss_pred eEEEEecccchhhhhccccCCceEEeccCC-----CCCc--------eEEEcCCceEEEEEEccchhhhhH
Confidence 999999999988766554445554444332 1123 445556777766666665554433
No 328
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.94 E-value=15 Score=41.49 Aligned_cols=102 Identities=10% Similarity=0.087 Sum_probs=59.7
Q ss_pred EEEEeCCCeEEEEEccCCeEEE--EeecCCCCCCCeecCCCCCccCCceeeeecC-CCCceeeecCCCCceEEeecC-CC
Q 009715 391 FGSVGQDTRLLLWDLEMDEIVV--PLRRGPLGGSPTFSTGSQSAHWDNVCPVGTL-QPAPSMRDVPKLSPLVAHRVH-TE 466 (528)
Q Consensus 391 l~s~s~D~~i~lwd~~~~~~~~--~~~~~~~~~~~~~s~~~~~~~~d~~~~~g~~-~~~~~~~d~~~~~~~~~~~~h-~~ 466 (528)
++.+. ++.|.++++..++... .......+.++.+.+..........+.+|.. +..++++.++..+++....-. ..
T Consensus 526 vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~ 604 (1158)
T 3ei3_A 526 VVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEI 604 (1158)
T ss_dssp EEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSC
T ss_pred EEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCC
Confidence 43434 6788888887654322 2222234444444443322334456678876 889999999887766543321 23
Q ss_pred CeEEEEEeC----CeEEEEECCCeEEEEeCC
Q 009715 467 PLSGLIFTQ----ESVLTVCREGHIKIWMRP 493 (528)
Q Consensus 467 ~V~~l~~s~----d~l~t~s~Dg~i~iW~~~ 493 (528)
...++.+.. -+|..+-.||.+..+.+.
T Consensus 605 ~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 605 IPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred CCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 445555442 248888899988666654
No 329
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.92 E-value=15 Score=41.47 Aligned_cols=78 Identities=8% Similarity=0.088 Sum_probs=43.4
Q ss_pred CCCceeeecCCCC--ceEEeecCCCCeEEEEEeCCeEEEEECCCeEEEEeCCCCccccC--CCccce--EEEccCCceEE
Q 009715 444 QPAPSMRDVPKLS--PLVAHRVHTEPLSGLIFTQESVLTVCREGHIKIWMRPGVAESQS--SSSETV--LSTSSKDKPLL 517 (528)
Q Consensus 444 ~~~~~~~d~~~~~--~~~~~~~h~~~V~~l~~s~d~l~t~s~Dg~i~iW~~~~~~~~~~--~~~~~v--l~~spd~~~l~ 517 (528)
.+.+.++++...+ .+... ...++|++|+--...|+.| ....|++|++...+.... .+-..+ +.+...+++++
T Consensus 863 ~Gri~vf~v~~~kL~lv~~~-~v~g~v~al~~~~g~Lla~-ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~ 940 (1158)
T 3ei3_A 863 QGRIVVFQYSDGKLQTVAEK-EVKGAVYSMVEFNGKLLAS-INSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFIL 940 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEE-EESSCEEEEEEETTEEEEE-ETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEE
T ss_pred ceEEEEEEEECCEEEEEEEE-EcCCcCEEEeeeCCEEEEE-cCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEE
Confidence 3456677765332 22222 2467888887555555544 347999999986542221 111112 34445677777
Q ss_pred Eeeeec
Q 009715 518 SSKVVT 523 (528)
Q Consensus 518 s~~~~g 523 (528)
.|..--
T Consensus 941 vgD~~~ 946 (1158)
T 3ei3_A 941 VGDLMR 946 (1158)
T ss_dssp EEESSB
T ss_pred EEEhhh
Confidence 776553
No 330
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.90 E-value=6.1 Score=36.93 Aligned_cols=103 Identities=10% Similarity=0.007 Sum_probs=54.4
Q ss_pred CCCEEEEEeCC--------CcEEEEecCCceEEee--ecccCCCeEEEEEcCCCCEEEEEeC-C-----CcEEEEECCCC
Q 009715 290 DGTYLATVGRD--------GYLRVFDYSKEQLICG--GKSYYGALLCCAWSMDGKYILTGGE-D-----DLVQVWSMEDR 353 (528)
Q Consensus 290 dg~~l~s~~~d--------g~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~g~~l~sg~~-d-----g~v~vwd~~~~ 353 (528)
++..++.|+.+ ..+.+||+.+.+-... +....... +++. -++++++.|+. + ..+.+||..+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 55666666632 3588999987753322 11111111 2222 36677777765 2 46899998876
Q ss_pred eEEE--EeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCC-----eEEEEEccCCe
Q 009715 354 KVVA--WGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT-----RLLLWDLEMDE 409 (528)
Q Consensus 354 ~~~~--~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~-----~i~lwd~~~~~ 409 (528)
+-.. .+......-..+.+ ++ .+++.|+.++ .+.+||+.+.+
T Consensus 176 ~W~~~~~~p~~r~~~~~~~~---------~~------~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 176 EWKELAPMQTARSLFGATVH---------DG------RIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEEECCCCSSCCBSCEEEEE---------TT------EEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred eEEECCCCCCchhceEEEEE---------CC------EEEEEeccCCCCccceEEEEECCCCe
Confidence 4221 11111111222233 44 6777777654 46777776654
No 331
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.68 E-value=8.9 Score=38.26 Aligned_cols=111 Identities=18% Similarity=0.235 Sum_probs=58.3
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC-
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD- 290 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd- 290 (528)
..+.|+|.|+|. ++++-...+.|++++... +... .+...... + ......+....|+|+||
T Consensus 28 ~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~-g~~~-~~~~~~~~---------------~-~~~~g~~Gllgia~~Pdf 88 (454)
T 1cru_A 28 KPHALLWGPDNQ-IWLTERATGKILRVNPES-GSVK-TVFQVPEI---------------V-NDADGQNGLLGFAFHPDF 88 (454)
T ss_dssp SEEEEEECTTSC-EEEEETTTCEEEEECTTT-CCEE-EEEECTTC---------------C-CCTTSSCSEEEEEECTTT
T ss_pred CceEEEEcCCCc-EEEEEcCCCEEEEEECCC-CcEe-EEecCCcc---------------c-cccCCCCceeEEEECCCc
Confidence 567999999998 555544334788887532 2110 00000000 0 00001366789999995
Q ss_pred --CCEEEEEeC-------------CCcEEEEecCCc-------eEEe-eecc-cCCCeEEEEEcCCCCEEEEEeC
Q 009715 291 --GTYLATVGR-------------DGYLRVFDYSKE-------QLIC-GGKS-YYGALLCCAWSMDGKYILTGGE 341 (528)
Q Consensus 291 --g~~l~s~~~-------------dg~i~vwd~~~~-------~~~~-~~~~-~~~~v~~l~~sp~g~~l~sg~~ 341 (528)
+.+|..+.. ...|.-|++... +.+. .+.. .......|+|.|||.+.++.+.
T Consensus 89 ~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 89 KNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp TTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 455554432 134555555321 1222 1211 1124678999999997776543
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=92.45 E-value=4 Score=38.96 Aligned_cols=56 Identities=7% Similarity=0.033 Sum_probs=29.1
Q ss_pred cEEEEECCCCe--EEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCC------eEEEEEccCCeEEEEe
Q 009715 344 LVQVWSMEDRK--VVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT------RLLLWDLEMDEIVVPL 414 (528)
Q Consensus 344 ~v~vwd~~~~~--~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~------~i~lwd~~~~~~~~~~ 414 (528)
.+.+||+++.+ .+..+......-.++.+ ++ .+++.|+.+. .|.++++++++.+...
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---------~~------~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPW---------NN------SLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEE---------TT------EEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEe---------CC------EEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 57789988753 33333322222223333 55 6788888553 3556688877766544
No 333
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=91.89 E-value=21 Score=40.81 Aligned_cols=211 Identities=9% Similarity=0.096 Sum_probs=116.4
Q ss_pred cEEEEeCCCCCCC------------CCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEe
Q 009715 152 AIFISDLNSQDKD------------AKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWV 219 (528)
Q Consensus 152 ~i~v~~~~~~~~~------------~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 219 (528)
.+.|.|+..+... +|..+.++.-. ...++|||+.++.+ + .... ....|.--+|-
T Consensus 49 ~vvIidl~~~~~~~rrpi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~k-----l-ks~~-------~~e~VvfWkWi 114 (1630)
T 1xi4_A 49 QVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSK-----M-KAHT-------MTDDVTFWKWI 114 (1630)
T ss_pred eEEEEECCCCCCcccccccchhhccCCCcceEEEec-CCeEEEeehHHhhh-----h-cccc-------cCCCceEEEec
Confidence 4677777764332 88888777765 67999999987321 1 1111 33467788887
Q ss_pred eCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEe-
Q 009715 220 PGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVG- 298 (528)
Q Consensus 220 p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~- 298 (528)
.+.. |+-.+ +..|+-|++..+..+...|..+..- . ...|..-.-+++.++++..+
T Consensus 115 s~~~--l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L-------------------~--~~QIinY~~d~~~kW~~l~gi 170 (1630)
T 1xi4_A 115 SLNT--VALVT-DNAVYHWSMEGESQPVKMFDRHSSL-------------------A--GCQIINYRTDAKQKWLLLTGI 170 (1630)
T ss_pred CCCe--eEEEc-CCeEEEeccCCCCccHHHHhcchhc-------------------c--cCeeEEeeeCCCCCeEEEEee
Confidence 6665 33333 2479999996422222222211110 0 24566677778888777544
Q ss_pred ------CCCcEEEEecCCceEEeeecccCCCeEEEEEc--C-CCCEEEEEeC---CCcEEEEECCCC---eE------EE
Q 009715 299 ------RDGYLRVFDYSKEQLICGGKSYYGALLCCAWS--M-DGKYILTGGE---DDLVQVWSMEDR---KV------VA 357 (528)
Q Consensus 299 ------~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~s--p-~g~~l~sg~~---dg~v~vwd~~~~---~~------~~ 357 (528)
-.|.+.+|..+.+ .-+.+.+|.+....+... + ...++..+.. .+.++|-++... .+ +.
T Consensus 171 ~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~ 249 (1630)
T 1xi4_A 171 SAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVD 249 (1630)
T ss_pred ccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCcccccc
Confidence 3478888888743 234456665544333332 1 1123333222 267888887442 11 11
Q ss_pred Eeec---CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEe
Q 009715 358 WGEG---HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPL 414 (528)
Q Consensus 358 ~~~~---h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 414 (528)
.+.. -.+-..++..++. .| .+...+.-|.|.++|+.++.++..-
T Consensus 250 ~~~~~~~~~Dfpv~~~vs~k------~g-------~iy~itk~G~~~~~d~~t~~~i~~~ 296 (1630)
T 1xi4_A 250 VFFPPEAQNDFPVAMQISEK------HD-------VVFLITKYGYIHLYDLETGTCIYMN 296 (1630)
T ss_pred ccCCcccccCcceEEEeccc------cC-------EEEEEecCceEEEEecccchhhhhc
Confidence 1110 1122223444431 33 5667778899999999999887544
No 334
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.90 E-value=19 Score=38.41 Aligned_cols=243 Identities=12% Similarity=0.070 Sum_probs=120.4
Q ss_pred CCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC
Q 009715 210 NSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST 289 (528)
Q Consensus 210 ~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 289 (528)
...|.++.-..+|. |..|..+| +..++..+.... .+..... . ..... .....|.++.-..
T Consensus 323 ~~~v~~i~~D~~g~--lWiGt~~G-l~~~~~~~~~~~--~~~~~~~--------~--~~~~~-----l~~~~v~~i~~d~ 382 (758)
T 3ott_A 323 GNQFYSLFRDSKGF--YWFGGANG-LIRFTDPAGERH--DAIWYRM--------G--DKTYP-----LSHNRIRHIYEDK 382 (758)
T ss_dssp CCBEEEEEECTTCC--EEEEETTE-EEEESCTTSSCC--CCEEECT--------T--CSSSC-----CSCSCEEEEEECT
T ss_pred CceEEEEEEcCCCC--EEEeeCCc-ceeecccccccc--eeEEecc--------C--CcCCC-----CCCCceEEEEECC
Confidence 34688888877776 55666655 555654431110 0000000 0 00000 0124688888888
Q ss_pred CCCEEEEEeCCCcEEEEecCCceEEeee--cc----cCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC-----eEE--
Q 009715 290 DGTYLATVGRDGYLRVFDYSKEQLICGG--KS----YYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDR-----KVV-- 356 (528)
Q Consensus 290 dg~~l~s~~~dg~i~vwd~~~~~~~~~~--~~----~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~-----~~~-- 356 (528)
+|.+ ..|+. +-|..||..+++..... .. ....|.++.-.+++. |..|...+-|.++|.++. ...
T Consensus 383 ~g~l-Wigt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigT~~~Gl~~~~~~~~~~~~~~~~~~ 459 (758)
T 3ott_A 383 EQQL-WIATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQ-LWISTCLGGIFVVDKHKLMQSTSGQYIA 459 (758)
T ss_dssp TSCE-EEEET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSE-EEEEESSSCEEEEEHHHHHHCCSSEEEC
T ss_pred CCCE-EEEeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCC-EEEEECCCceEEEccccccccCCcceec
Confidence 8764 44554 56899999887654321 11 124578887777775 555666666788885421 111
Q ss_pred -EEee---c-CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecCCCC---CCCeecCC
Q 009715 357 -AWGE---G-HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLG---GSPTFSTG 428 (528)
Q Consensus 357 -~~~~---~-h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~---~~~~~s~~ 428 (528)
..+. + ....|.++..++ +| .+.+.++..+-|..+|..+++.... ...... ....+..+
T Consensus 460 ~~~~~~~~~l~~~~i~~i~~d~-------~g------~lWi~~~t~~Gl~~~d~~~~~~~~~-~~~~~~~~~~~~~i~~d 525 (758)
T 3ott_A 460 EQNYSVHNGLSGMFINQIIPDN-------EG------NVWVLLYNNKGIDKINPRTREVTKL-FADELTGEKSPNYLLCD 525 (758)
T ss_dssp SEEECGGGTCSCSCEEEEEECT-------TS------CEEEEETTCSSEEEEETTTTEEEEE-CTTTSCGGGCEEEEEEC
T ss_pred ccccccccccccceeeeEEEcC-------CC------CEEEEccCCCCcEEEeCCCCceEEe-cCCCcCCCcccceEEEC
Confidence 1111 1 123588998887 77 3444233345588889887765432 211100 00011111
Q ss_pred CCCccCCceeeeecCCCCceeeecCCCCceE-Eee-cCCCCeEEEEEeCCeEEEEECCCeEEEEeCCCCc
Q 009715 429 SQSAHWDNVCPVGTLQPAPSMRDVPKLSPLV-AHR-VHTEPLSGLIFTQESVLTVCREGHIKIWMRPGVA 496 (528)
Q Consensus 429 ~~~~~~d~~~~~g~~~~~~~~~d~~~~~~~~-~~~-~h~~~V~~l~~s~d~l~t~s~Dg~i~iW~~~~~~ 496 (528)
.+..+=+++.. -+..++....+... ... -....|.++......|..++.+| |..++.....
T Consensus 526 -----~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~~~g~lWi~t~~G-l~~~~~~~~~ 588 (758)
T 3ott_A 526 -----EDGLLWVGFHG-GVMRINPKDESQQSISFGSFSNNEILSMTCVKNSIWVSTTNG-LWIIDRKTMD 588 (758)
T ss_dssp -----TTSCEEEEETT-EEEEECC--CCCCBCCCCC---CCEEEEEEETTEEEEEESSC-EEEEETTTCC
T ss_pred -----CCCCEEEEecC-ceEEEecCCCceEEecccCCCccceEEEEECCCCEEEECCCC-eEEEcCCCce
Confidence 12222233332 34445443322110 001 11345778876534476666665 6667766554
No 335
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=90.46 E-value=0.49 Score=45.33 Aligned_cols=118 Identities=11% Similarity=0.022 Sum_probs=74.6
Q ss_pred CEEEEEeCCCcEEEEecCCceEEeeeccc-CCCeEEEEEc--C-CCCEEEEE-eCCCcEEEEECCCCeEEEEeec----C
Q 009715 292 TYLATVGRDGYLRVFDYSKEQLICGGKSY-YGALLCCAWS--M-DGKYILTG-GEDDLVQVWSMEDRKVVAWGEG----H 362 (528)
Q Consensus 292 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~v~~l~~s--p-~g~~l~sg-~~dg~v~vwd~~~~~~~~~~~~----h 362 (528)
..++.++.||.|.-+|.++|+.+..++.. ..++....-. + ++..++.. ..||.|..++.++|.....+.- .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47889999999999999999999887653 1233221110 1 22333333 5899999999988855433321 1
Q ss_pred CCCeEEEEEecCCCCC---CCCCCccceeEEEEEEeCCCeEEEEEccCCeEEEEeecC
Q 009715 363 NSWVSGVAFDSYWSQP---NSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRG 417 (528)
Q Consensus 363 ~~~V~~v~f~p~~~~~---~~dg~~~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~ 417 (528)
..++.. .=.|....+ ..+| .+++++.++++...|+++|+.+..+...
T Consensus 91 ~SP~~~-~~~pvv~~~~~~~~~g-------~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 91 TSPLHL-KTNIVVNDSGKIVEDE-------KVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TCSEEE-ECC----------CCE-------EEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cccccc-CCCceeecccccccCC-------EEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 222221 100000000 0143 7899999999999999999999998764
No 336
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.39 E-value=14 Score=40.72 Aligned_cols=38 Identities=26% Similarity=0.235 Sum_probs=33.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeee
Q 009715 280 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGG 317 (528)
Q Consensus 280 ~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~ 317 (528)
..|.+++..++..++++-+.|+.+|+|++.+++++...
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 45778888888899999999999999999999988764
No 337
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.04 E-value=14 Score=35.37 Aligned_cols=50 Identities=16% Similarity=0.164 Sum_probs=30.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE----EEEeecCCCCeEEEEEec
Q 009715 323 ALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKV----VAWGEGHNSWVSGVAFDS 373 (528)
Q Consensus 323 ~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~----~~~~~~h~~~V~~v~f~p 373 (528)
....++|. ++.+++..-..+.|....++.... ...+.+....+..|+..|
T Consensus 264 ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~p 317 (347)
T 3das_A 264 SPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAG 317 (347)
T ss_dssp CEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEE
T ss_pred CCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECC
Confidence 34556665 455566555566676666654432 233444456799999999
No 338
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.93 E-value=13 Score=34.81 Aligned_cols=70 Identities=13% Similarity=0.087 Sum_probs=43.2
Q ss_pred EEECCCCCEEEEEe----CCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCeEEEEe
Q 009715 285 IAFSTDGTYLATVG----RDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE-DDLVQVWSMEDRKVVAWG 359 (528)
Q Consensus 285 l~~spdg~~l~s~~----~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~-dg~v~vwd~~~~~~~~~~ 359 (528)
..|++++++|+... .+..|...+++... ...+..+.. .+++++++.|.-.+. ...|.+-++..+.....+
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~ 183 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFY 183 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEe
Confidence 36777888888876 33456666766333 223332322 456778888886654 578888888766544333
No 339
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.91 E-value=13 Score=34.79 Aligned_cols=66 Identities=9% Similarity=0.058 Sum_probs=41.7
Q ss_pred EEECCCCCEEEEEeC-CCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEEEEEeCC--CcEEEEECCCCe
Q 009715 285 IAFSTDGTYLATVGR-DGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGED--DLVQVWSMEDRK 354 (528)
Q Consensus 285 l~~spdg~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l~sg~~d--g~v~vwd~~~~~ 354 (528)
..|+++++.|+..+. ...|.+.++..+.....+. +... ..++|++.+|+-...+ ..|..-+++...
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence 346678888887665 5788888988665443333 2222 3466999988866543 356666666543
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=89.67 E-value=16 Score=38.69 Aligned_cols=109 Identities=12% Similarity=0.032 Sum_probs=62.3
Q ss_pred CCCCEEEEEeCCC--cEEEEecCCceEEeee-----cccCCCeEEEEEcCC-CCEEEEEeC--C-----CcEEEEECCCC
Q 009715 289 TDGTYLATVGRDG--YLRVFDYSKEQLICGG-----KSYYGALLCCAWSMD-GKYILTGGE--D-----DLVQVWSMEDR 353 (528)
Q Consensus 289 pdg~~l~s~~~dg--~i~vwd~~~~~~~~~~-----~~~~~~v~~l~~sp~-g~~l~sg~~--d-----g~v~vwd~~~~ 353 (528)
.+++.++.|+.++ .+.+||+.+.+-...- ........++.+..+ +++++.|+. + ..+.+||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 3778888887654 6899999877643221 111222233555555 667777765 2 35889998877
Q ss_pred eE-----EEEeec----CCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeC--------CCeEEEEEccCCeEE
Q 009715 354 KV-----VAWGEG----HNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQ--------DTRLLLWDLEMDEIV 411 (528)
Q Consensus 354 ~~-----~~~~~~----h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~--------D~~i~lwd~~~~~~~ 411 (528)
+- -..+.. .......+.+. ++ .+++.|+. ...|.+||+.+.+-.
T Consensus 579 ~w~~~~~W~~~~~~p~~~R~~~~~~~~~--------~~------~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 579 NATEPITVIKKLQHPLFQRYGSQIKYIT--------PR------KLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp CSSCCEEEEEEEECGGGCCBSCEEEEEE--------TT------EEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred ccccceEEEEcCCCCCCCcccceEEEeC--------CC------EEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 61 111111 11122233332 35 67777774 345888888877644
No 341
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.37 E-value=6.8 Score=39.13 Aligned_cols=103 Identities=12% Similarity=0.161 Sum_probs=60.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEecCCceE--Eeeecc------cCCCeEEEEEcCC---CCEEEEEeC-------
Q 009715 280 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQL--ICGGKS------YYGALLCCAWSMD---GKYILTGGE------- 341 (528)
Q Consensus 280 ~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~--~~~~~~------~~~~v~~l~~sp~---g~~l~sg~~------- 341 (528)
.....|+|.|+|+++++-...+.|++++..+++. +..+.. ..+..+.|+|+|+ +.+|.+...
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 5677999999998666654334788888655543 222221 2356789999995 444444332
Q ss_pred ------CCcEEEEECCCC-------eEEEE-ee-cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe
Q 009715 342 ------DDLVQVWSMEDR-------KVVAW-GE-GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG 395 (528)
Q Consensus 342 ------dg~v~vwd~~~~-------~~~~~-~~-~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s 395 (528)
...|.-|++... +.+.. +. ........|+|.| || +++++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-------DG------~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-------DQ------KIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-------TS------CEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-------CC------eEEEEEC
Confidence 134555554321 12221 22 1223578999999 99 5666654
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.89 E-value=15 Score=34.22 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=53.7
Q ss_pred CCCEEEEEeCC-------CcEEEEecCCceEEee--ecccCCCeEEEEEcCCCCEEEEEeC------CCcEEEEECCCCe
Q 009715 290 DGTYLATVGRD-------GYLRVFDYSKEQLICG--GKSYYGALLCCAWSMDGKYILTGGE------DDLVQVWSMEDRK 354 (528)
Q Consensus 290 dg~~l~s~~~d-------g~i~vwd~~~~~~~~~--~~~~~~~v~~l~~sp~g~~l~sg~~------dg~v~vwd~~~~~ 354 (528)
+++.++.|+.+ ..+.+||+.+.+-... +....... +++. .++++++.|+. -..+.+||+.+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56677777653 2478889887654322 11100111 1222 46777777764 2358999998764
Q ss_pred EEEE--eecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCC-----CeEEEEEccCCe
Q 009715 355 VVAW--GEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD-----TRLLLWDLEMDE 409 (528)
Q Consensus 355 ~~~~--~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D-----~~i~lwd~~~~~ 409 (528)
-... +.........+.+ ++ .+++.|+.+ ..+.+||+.+.+
T Consensus 187 W~~~~~~p~~r~~~~~~~~---------~~------~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 187 WKDLAPMKTPRSMFGVAIH---------KG------KIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEECCCSSCCBSCEEEEE---------TT------EEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEECCCCCCCcccceEEEE---------CC------EEEEEcCcCCCCccceEEEEECCCCe
Confidence 3221 1111111222233 55 577777643 246677776654
No 343
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=88.85 E-value=6.3 Score=37.80 Aligned_cols=103 Identities=23% Similarity=0.231 Sum_probs=59.9
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeee-------cccCCCeEEEEEcCC---CCEEEEEe-C-------
Q 009715 280 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGG-------KSYYGALLCCAWSMD---GKYILTGG-E------- 341 (528)
Q Consensus 280 ~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~-------~~~~~~v~~l~~sp~---g~~l~sg~-~------- 341 (528)
.....|+|.|+|+.|+++...|.|++++.. ++....+ .........|+++|+ +.+|.... .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 467899999999844455678999999854 4322111 112345789999996 44444432 2
Q ss_pred CCcEEEEECCCC-------eEEE-Eee---cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeC
Q 009715 342 DDLVQVWSMEDR-------KVVA-WGE---GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQ 396 (528)
Q Consensus 342 dg~v~vwd~~~~-------~~~~-~~~---~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~ 396 (528)
...|..|++... +.+. .+. .....-..|+|.| || +++++.+.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-------dG------~Lyv~~Gd 149 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-------KG------YLFIALGE 149 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-------SS------EEEEEECC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-------CC------cEEEEECC
Confidence 235666666432 1111 111 1112246799999 99 66666543
No 344
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=85.28 E-value=26 Score=33.34 Aligned_cols=104 Identities=18% Similarity=0.134 Sum_probs=63.5
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceE--Eeee----cccCCCeEEEEEcCC---CCEEEEE---eCCCcEE
Q 009715 279 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQL--ICGG----KSYYGALLCCAWSMD---GKYILTG---GEDDLVQ 346 (528)
Q Consensus 279 ~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~--~~~~----~~~~~~v~~l~~sp~---g~~l~sg---~~dg~v~ 346 (528)
-.....|+|.|||.++++--..|.|++++...++. +..+ .......+.|+++|+ ..+|... ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 35678999999998766665489999998765543 2222 122456889999995 3344432 2345566
Q ss_pred EEECCCC----------eEEE-Eee-cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEe
Q 009715 347 VWSMEDR----------KVVA-WGE-GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVG 395 (528)
Q Consensus 347 vwd~~~~----------~~~~-~~~-~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s 395 (528)
-|.+..+ +.+. .+. .....-..|+|.| || +++++.+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-------DG------~Lyvt~G 158 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-------DK------MLYAGTG 158 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-------TS------CEEEECB
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-------CC------CEEEEEC
Confidence 6665431 2221 222 1122356799999 99 5666654
No 345
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=83.92 E-value=36 Score=33.85 Aligned_cols=30 Identities=7% Similarity=0.122 Sum_probs=23.2
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcC
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKS 241 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~ 241 (528)
.-+.|+|.|+|...|+++...|.|++++..
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 467899999995346667788999999643
No 346
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=83.28 E-value=6.6 Score=37.40 Aligned_cols=120 Identities=9% Similarity=-0.018 Sum_probs=72.2
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEeecC-CCCeEEEEEecCCCCCCCCCCccceeEEEEEE-eCCCeEEEEEccCCeEE
Q 009715 334 KYILTGGEDDLVQVWSMEDRKVVAWGEGH-NSWVSGVAFDSYWSQPNSDGTAETVMYRFGSV-GQDTRLLLWDLEMDEIV 411 (528)
Q Consensus 334 ~~l~sg~~dg~v~vwd~~~~~~~~~~~~h-~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~-s~D~~i~lwd~~~~~~~ 411 (528)
.++++++.||.|.-+|.++|+.+..++.. ..++.... .+ . ...++ ..++.. ..||.|..+|..+|...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~-~~--~-~~~~~------~~~vv~p~~dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQ-EP--S-RLETY------ETLIIEPFGDGNIYYFNAHQGLQK 80 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECC-CS--C-TTTSS------EEEEECCSTTTEEEEEETTTEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEec-CC--c-cccCC------cEEEEEECCCCEEEEEECCCCcEE
Confidence 36888999999999999999998888743 12222211 01 0 00133 234343 68999999999888666
Q ss_pred EEeecCCCCC-CCeecCCCCCc------cCCceeeeecCCCCceeeecCCCCceEEeec
Q 009715 412 VPLRRGPLGG-SPTFSTGSQSA------HWDNVCPVGTLQPAPSMRDVPKLSPLVAHRV 463 (528)
Q Consensus 412 ~~~~~~~~~~-~~~~s~~~~~~------~~d~~~~~g~~~~~~~~~d~~~~~~~~~~~~ 463 (528)
..+....... +.......... ..+..+.+|+.++.+...|..+++.+..+..
T Consensus 81 ~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 81 LPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp EEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 5554321111 11111111111 1456677888888888888888888877753
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=82.37 E-value=6.9 Score=39.83 Aligned_cols=116 Identities=12% Similarity=0.013 Sum_probs=69.7
Q ss_pred ceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCC
Q 009715 212 RCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDG 291 (528)
Q Consensus 212 ~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg 291 (528)
....+.++|||+++++.|-.+.+|.|+++++-....... ..+......+ .... .-...-.+|.++|
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k--~~~~~~~~~a-----------e~e~-GlGPlHt~Fd~~G 389 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGK--LADPRDVIVG-----------EPEL-GLGPLHTTFDGRG 389 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTC--CSCGGGGEEE-----------CCBC-CSCEEEEEECSSS
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcc--ccCcccceEe-----------eccC-CCcccEEEECCCC
Confidence 456789999999666677788999999997511000000 0000000000 0000 1345568999999
Q ss_pred CEEEEEeCCCcEEEEecCCc----------eEEeeecccCCCeEEEE-----EcCCCCEEEEEeC
Q 009715 292 TYLATVGRDGYLRVFDYSKE----------QLICGGKSYYGALLCCA-----WSMDGKYILTGGE 341 (528)
Q Consensus 292 ~~l~s~~~dg~i~vwd~~~~----------~~~~~~~~~~~~v~~l~-----~sp~g~~l~sg~~ 341 (528)
....+--.|.+|..|++... ..+..+..|..+-.-.+ -.|||++|++.+.
T Consensus 390 ~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 390 NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred ceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 65566668999999999753 35555655655443222 2578999999754
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=79.12 E-value=22 Score=37.67 Aligned_cols=156 Identities=13% Similarity=0.154 Sum_probs=77.5
Q ss_pred CCCeEEEEecC------CcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCc--eEEEE
Q 009715 167 DGHDLLIGLNS------GDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADG--NLYVY 238 (528)
Q Consensus 167 ~~~~l~~g~~~------G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg--~v~vw 238 (528)
++..+++|+.+ .++.+||+.+..+..... ..... .-.+++...++. +++.|+.++ .+.+|
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~------~p~~R-----~~h~~~~~~~~~-iyv~GG~~~~~~v~~y 518 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKS------LSHTR-----FRHSACSLPDGN-VLILGGVTEGPAMLLY 518 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCC------CSBCC-----BSCEEEECTTSC-EEEECCBCSSCSEEEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCC------CCCCc-----ccceEEEEcCCE-EEEECCCCCCCCEEEE
Confidence 66666777643 367888887643332111 11111 111223323676 788887655 68889
Q ss_pred EcCCCCCCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCC-CCEEEEEeC--C-----CcEEEEecCC
Q 009715 239 EKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTD-GTYLATVGR--D-----GYLRVFDYSK 310 (528)
Q Consensus 239 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spd-g~~l~s~~~--d-----g~i~vwd~~~ 310 (528)
|..+.. ......... .+.. .....++.+..+ ++.++.|+. + ..+.+||+.+
T Consensus 519 d~~t~~--W~~~~~~g~--------------~p~~-----r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 519 NVTEEI--FKDVTPKDE--------------FFQN-----SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp ETTTTE--EEECCCSSG--------------GGGS-----CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred ECCCCc--eEEccCCCC--------------CCCc-----ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 887521 111100000 0000 011123455554 667777765 2 3588999987
Q ss_pred ceE-----Eeeecc---cCCCeEEEEEcCCCCEEEEEeC--------CCcEEEEECCCCeE
Q 009715 311 EQL-----ICGGKS---YYGALLCCAWSMDGKYILTGGE--------DDLVQVWSMEDRKV 355 (528)
Q Consensus 311 ~~~-----~~~~~~---~~~~v~~l~~sp~g~~l~sg~~--------dg~v~vwd~~~~~~ 355 (528)
.+- ...+.. ....-.++....++++++.|+. ...|.+||+.+.+-
T Consensus 578 ~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 578 ENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp TCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred CccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 761 111111 1111123333334777777774 34688999987653
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=78.99 E-value=23 Score=35.26 Aligned_cols=106 Identities=17% Similarity=0.206 Sum_probs=61.9
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEecCCce---EEeeec---------ccCCCeEEEEEcCC----CCEEEEEeC-
Q 009715 280 GSINSIAFSTDGT-YLATVGRDGYLRVFDYSKEQ---LICGGK---------SYYGALLCCAWSMD----GKYILTGGE- 341 (528)
Q Consensus 280 ~~v~~l~~spdg~-~l~s~~~dg~i~vwd~~~~~---~~~~~~---------~~~~~v~~l~~sp~----g~~l~sg~~- 341 (528)
.....|+|.|||. .|+++...|.|++++..... .+..+. ......+.|+++|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4567899999986 56666788999999754221 111111 11356889999996 443333221
Q ss_pred -C----------CcEEEEECCC----------CeEEEEee--cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCC
Q 009715 342 -D----------DLVQVWSMED----------RKVVAWGE--GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT 398 (528)
Q Consensus 342 -d----------g~v~vwd~~~----------~~~~~~~~--~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~ 398 (528)
+ ..|.-|.+.. .+.+..+. .....-..|+|.| || +++++.+..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-------DG------~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-------DG------FLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-------TS------CEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-------CC------cEEEEeCCCC
Confidence 1 1344455532 12333332 1223468899999 99 5666666543
No 350
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=78.30 E-value=11 Score=38.35 Aligned_cols=72 Identities=22% Similarity=0.381 Sum_probs=52.9
Q ss_pred CeEEEEEcCCCCEEEEEeC-CCcEEEEECCCC------e-------EEEEeecCCCCeEEEEEecCCCCCCCCCCcccee
Q 009715 323 ALLCCAWSMDGKYILTGGE-DDLVQVWSMEDR------K-------VVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVM 388 (528)
Q Consensus 323 ~v~~l~~sp~g~~l~sg~~-dg~v~vwd~~~~------~-------~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~ 388 (528)
....+..+|||++++.++. +.++.|+|++.- + .+...+ -.-.....+|++ +|
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~-------~G------ 389 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG-------RG------ 389 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS-------SS------
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC-------CC------
Confidence 3457889999999887655 789999998741 1 123333 334567789998 88
Q ss_pred EEEEEEeCCCeEEEEEccCC
Q 009715 389 YRFGSVGQDTRLLLWDLEMD 408 (528)
Q Consensus 389 ~~l~s~s~D~~i~lwd~~~~ 408 (528)
+...|--.|.+|.-|++...
T Consensus 390 ~aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 390 NAYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp EEEEEETTTTEEEEEEHHHH
T ss_pred ceEeeeeecceEEEEeccHH
Confidence 66777779999999999753
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=76.35 E-value=46 Score=30.42 Aligned_cols=174 Identities=16% Similarity=0.123 Sum_probs=85.8
Q ss_pred CCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCC
Q 009715 167 DGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAG 246 (528)
Q Consensus 167 ~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~ 246 (528)
..+.++. . +|+|+.|-....-+ .-.+. . -...|..|+...+- .++. . ||.|+.|-....+..
T Consensus 72 ~~hs~~l-~-~G~v~~wG~n~~Gq----lg~P~-~-------~~~~v~~ia~G~~h--s~al-~-~G~v~~wG~n~~gql 133 (282)
T 3qhy_B 72 NYHSLAL-K-DGEVIAWGGNEDGQ----TTVPA-E-------ARSGVDAIAAGAWA--SYAL-K-DGKVIAWGDDSDGQT 133 (282)
T ss_dssp SSEEEEE-E-TTEEEEEECCTTST----TCCCG-G-------GSSSEEEEEEETTE--EEEE-E-TTEEEEEECCTTSTT
T ss_pred CCEEEEE-E-CCEEEEeeCCCCCC----CCCCc-c-------cCCCeEEEECcCCE--EEEE-e-CCeEEEecCCCCCcC
Confidence 3444555 4 99999997654211 10000 0 12357777665442 3333 4 999999987654432
Q ss_pred CCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEE
Q 009715 247 DSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLC 326 (528)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~ 326 (528)
-..... ...|..++...+.. ++ -. ||.|..|-......+.........|..
T Consensus 134 g~~~~~--------------------------~~~i~~i~~G~~~~-~~-l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~ 184 (282)
T 3qhy_B 134 TVPAEA--------------------------QSGVTALDGGVYTA-LA-VK-NGGVIAWGDNYFGQTTVPAEAQSGVDD 184 (282)
T ss_dssp SCCGGG--------------------------GSSEEEEEECSSEE-EE-EE-TTEEEEEECCTTSTTSCCGGGGSSEEE
T ss_pred CCCccC--------------------------CCCeEEEEcccCEE-EE-EE-CCEEEEecCCCCCCCCCceecCCCeEE
Confidence 211100 13455555543322 22 23 688888866432111111111245666
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc
Q 009715 327 CAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 406 (528)
Q Consensus 327 l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~ 406 (528)
|+--.+. .++. .||.|+.|-....-.+..-......|..|+.-. +- .++. . |+.|..|=..
T Consensus 185 i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~-------~h-------~~al-~-~g~v~~wG~n 245 (282)
T 3qhy_B 185 VAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGE-------WY-------SLAL-K-NGKVIAWGSS 245 (282)
T ss_dssp EEECSSE-EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECS-------SC-------EEEE-E-TTEEEEESTT
T ss_pred EEecCCE-EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCC-------CE-------EEEE-E-CCEEEEecCC
Confidence 6654332 2333 589999997654211111011123466676543 22 2222 3 8999998644
No 352
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=76.20 E-value=11 Score=42.50 Aligned_cols=38 Identities=26% Similarity=0.235 Sum_probs=32.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeee
Q 009715 280 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGG 317 (528)
Q Consensus 280 ~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~ 317 (528)
..+.+++..++..++++-+.|+.+|+|++.+++++...
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 34566677788899999999999999999999998764
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=68.41 E-value=25 Score=38.68 Aligned_cols=38 Identities=11% Similarity=0.070 Sum_probs=33.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q 009715 323 ALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGE 360 (528)
Q Consensus 323 ~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~ 360 (528)
.+.+++..++..++++-+.|+.+|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46777888888899999999999999999999987754
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=60.65 E-value=1e+02 Score=28.12 Aligned_cols=166 Identities=13% Similarity=0.087 Sum_probs=83.6
Q ss_pred CCcEEEEEccccccccccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCCCCCCcccccccc
Q 009715 177 SGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQ 256 (528)
Q Consensus 177 ~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~~~~~ 256 (528)
+|+|+.|-....- +.-.+. .....|..|+...+- .++. . ||.|+.|-....+..-.... .
T Consensus 41 ~G~v~~wG~n~~G----qlg~p~--------~~~~~i~~ia~G~~h--s~~l-~-~G~v~~wG~n~~Gqlg~P~~--~-- 100 (282)
T 3qhy_B 41 GGKVLGWGANLNG----QLTMPA--------ATQSGVDAIAAGNYH--SLAL-K-DGEVIAWGGNEDGQTTVPAE--A-- 100 (282)
T ss_dssp TTEEEEEECCSSS----TTSCCG--------GGGSCCCEEEECSSE--EEEE-E-TTEEEEEECCTTSTTCCCGG--G--
T ss_pred CCEEEEEeCCCCC----CCCCCc--------cCCCCEEEEEeCCCE--EEEE-E-CCEEEEeeCCCCCCCCCCcc--c--
Confidence 8899998755411 100000 022356666664432 4444 4 99999998765443321100 0
Q ss_pred ceeEEeccCCCCCCCeEEEeecCCCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeecccCCCeEEEEEcCCCCEE
Q 009715 257 TQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYI 336 (528)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~l~~sp~g~~l 336 (528)
...|..|+...+. .+.-. ||.|..|-......+.........|..++--.+ +.
T Consensus 101 ----------------------~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~ 153 (282)
T 3qhy_B 101 ----------------------RSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TA 153 (282)
T ss_dssp ----------------------SSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EE
T ss_pred ----------------------CCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EE
Confidence 1356666665443 33334 888888876532111111112344666654332 22
Q ss_pred EEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCCeEEEEEcc
Q 009715 337 LTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 406 (528)
Q Consensus 337 ~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~~i~lwd~~ 406 (528)
+.-. ||.|..|-......+..-..-...|..|+.-. + ..++. .|+.|..|=..
T Consensus 154 ~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~-------~-------hs~al--~~G~v~~wG~n 206 (282)
T 3qhy_B 154 LAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGI-------F-------HSLAL--KDGKVIAWGDN 206 (282)
T ss_dssp EEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECS-------S-------EEEEE--ETTEEEEEECC
T ss_pred EEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecC-------C-------EEEEE--ECCeEEEEECC
Confidence 2233 78899997654211111111234577777643 2 23333 58999998643
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=60.46 E-value=1.2e+02 Score=29.09 Aligned_cols=214 Identities=11% Similarity=0.121 Sum_probs=104.0
Q ss_pred CcceeeeCCCccEEEEeCCCcEEEEeCCCCCCCCCCCCeEEEEecCCcEEEEEccccccccccceeeeeeeccCCcccCC
Q 009715 132 SMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKDAKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNS 211 (528)
Q Consensus 132 s~~~~~~~~~g~~~~~~~~~~i~v~~~~~~~~~~~~~~~l~~g~~~G~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~h~~ 211 (528)
+...+..|..+++|+.+.|..-..-+... ..... .-+|.+||+.+. ..+++....+..+.....+
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~--~~~~~---------~pkLv~~DL~t~----~~~li~~y~~p~~~~~~~S 152 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAK--DYPSH---------RPAIVAYDLKQP----NYPEVVRYYFPTRLVEKPT 152 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGG--GSCCC---------CCEEEEEESSST----TCCEEEEEECCGGGCCCGG
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccc--cCCCC---------CceEEEEECCCC----CceeEEEEECCHHhcccCC
Confidence 44456678889999998775311000000 00001 115666666651 0012222333333222445
Q ss_pred ceeEEEEe---eC---CCcEEEEE-eCCceEEEEEcCCCCCCCCccccc--cc-cceeEEeccCCCCCCCeEEEeecCCC
Q 009715 212 RCTSVTWV---PG---GDGAFVVG-HADGNLYVYEKSKDGAGDSSFPVI--KD-QTQFSVAHPRYSKSNPIARWHICQGS 281 (528)
Q Consensus 212 ~v~~l~~~---p~---g~~~l~tg-~~dg~v~vwd~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~h~~~ 281 (528)
.+..+++. |. ++.++..+ ...+-|.|+|+.++... ...... .+ ...+.+. ... ..| ...
T Consensus 153 ~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~sw-Rv~~~~~~pd~~~~~~i~------G~~-~~~---~~G 221 (381)
T 3q6k_A 153 YFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSW-NVTHPTFKAERPTKFDYG------GKE-YEF---KAG 221 (381)
T ss_dssp GEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEE-EEECGGGSCCSCEEEEET------TEE-EEE---CCC
T ss_pred ccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEE-EEccCCCccccCcceEEC------CEE-eEe---ccC
Confidence 68888888 22 12244444 35678999999863211 111000 00 0000000 000 011 257
Q ss_pred eEEEEECCC----CCEEEEEeCCCcEEEEecC-----Cce---EEeeecccC---CCeEEEEEc-CCCCEEEEEeCCCcE
Q 009715 282 INSIAFSTD----GTYLATVGRDGYLRVFDYS-----KEQ---LICGGKSYY---GALLCCAWS-MDGKYILTGGEDDLV 345 (528)
Q Consensus 282 v~~l~~spd----g~~l~s~~~dg~i~vwd~~-----~~~---~~~~~~~~~---~~v~~l~~s-p~g~~l~sg~~dg~v 345 (528)
|..|+++|+ ++.|......+ -++|.+. ... .++.+ +.. ..-..++.. .+|.++++--+...|
T Consensus 222 i~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI 299 (381)
T 3q6k_A 222 IFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEANTKQV 299 (381)
T ss_dssp EEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESSSSEE
T ss_pred ceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEEEeCCCCeEEEEeccCCeE
Confidence 999999998 77777776554 2344332 111 11111 112 223345665 578777777788899
Q ss_pred EEEECCC-C---eEEEEee--cCCCCeEEEEEec
Q 009715 346 QVWSMED-R---KVVAWGE--GHNSWVSGVAFDS 373 (528)
Q Consensus 346 ~vwd~~~-~---~~~~~~~--~h~~~V~~v~f~p 373 (528)
..|+..+ . +....+. .--.++..+.+.+
T Consensus 300 ~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~ 333 (381)
T 3q6k_A 300 SCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDS 333 (381)
T ss_dssp EEEETTSCSBCGGGEEEEEECTTCCSEEEEEECT
T ss_pred EEEeCCCCccccCceEEEEECCCccccCeEEECC
Confidence 9999875 1 1122221 1223567777765
No 356
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=59.98 E-value=1.1e+02 Score=28.48 Aligned_cols=52 Identities=19% Similarity=0.175 Sum_probs=28.3
Q ss_pred CCCEEEEEeC-C---------CcEEEEecCCceEEeeeccc-CC-CeEEEEEcCCCCEEEEEeCC
Q 009715 290 DGTYLATVGR-D---------GYLRVFDYSKEQLICGGKSY-YG-ALLCCAWSMDGKYILTGGED 342 (528)
Q Consensus 290 dg~~l~s~~~-d---------g~i~vwd~~~~~~~~~~~~~-~~-~v~~l~~sp~g~~l~sg~~d 342 (528)
++++++.|+. + ..+.+||+.+.+-...-... .. .-.++.. .++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence 4566666665 2 46889999877543321111 11 1112222 577788888764
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=54.96 E-value=37 Score=38.22 Aligned_cols=38 Identities=11% Similarity=0.070 Sum_probs=31.9
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEee
Q 009715 323 ALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGE 360 (528)
Q Consensus 323 ~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~~~~~~~~~ 360 (528)
.+.+++..++..++++-+.|+.+|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34556667788899999999999999999999987754
No 358
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=52.97 E-value=1.6e+02 Score=28.03 Aligned_cols=27 Identities=4% Similarity=-0.298 Sum_probs=16.6
Q ss_pred CCeEEEEECC-C-CCEEEEEeCCCcEEEE
Q 009715 280 GSINSIAFST-D-GTYLATVGRDGYLRVF 306 (528)
Q Consensus 280 ~~v~~l~~sp-d-g~~l~s~~~dg~i~vw 306 (528)
..|.+|++.| + ...|..+...+.|...
T Consensus 115 ~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 115 DHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp CEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred cceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 3577899987 3 4556666555555444
No 359
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=48.11 E-value=58 Score=34.23 Aligned_cols=37 Identities=22% Similarity=0.332 Sum_probs=29.9
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEecCCceEEeeec
Q 009715 280 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGK 318 (528)
Q Consensus 280 ~~v~~l~~spdg~~l~s~~~dg~i~vwd~~~~~~~~~~~ 318 (528)
..|.++.+ +..++++-+.|+.+|+||+++++++....
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 34666655 46799999999999999999999886654
No 360
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=43.70 E-value=91 Score=31.85 Aligned_cols=61 Identities=13% Similarity=0.066 Sum_probs=43.1
Q ss_pred CCeEEEEECCCCCEEEEEeC------------CCcEEEEecCCceEEeeeccc-CCCeEEEEEcCCCCEEEEEe
Q 009715 280 GSINSIAFSTDGTYLATVGR------------DGYLRVFDYSKEQLICGGKSY-YGALLCCAWSMDGKYILTGG 340 (528)
Q Consensus 280 ~~v~~l~~spdg~~l~s~~~------------dg~i~vwd~~~~~~~~~~~~~-~~~v~~l~~sp~g~~l~sg~ 340 (528)
.....|.|.++|.+.+.... ...|..++..+++....+... ...++.++|+||++.|.+.-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 56788999999987664321 125677777778766555432 35689999999999887763
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=42.18 E-value=70 Score=32.90 Aligned_cols=59 Identities=15% Similarity=0.106 Sum_probs=41.2
Q ss_pred CeEEEEECCCCCEEEEEeCC------------CcEEEEecCCceEEeeeccc-CCCeEEEEEcCCCCEEEEE
Q 009715 281 SINSIAFSTDGTYLATVGRD------------GYLRVFDYSKEQLICGGKSY-YGALLCCAWSMDGKYILTG 339 (528)
Q Consensus 281 ~v~~l~~spdg~~l~s~~~d------------g~i~vwd~~~~~~~~~~~~~-~~~v~~l~~sp~g~~l~sg 339 (528)
..-.|+|+|+|.+++.-..+ ..+.+.+..+++....+... ...++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45679999999865554322 24566677777766555443 4678999999999887765
No 362
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=42.17 E-value=29 Score=36.53 Aligned_cols=28 Identities=18% Similarity=0.261 Sum_probs=25.5
Q ss_pred EEEEEEeCCCeEEEEEccCCeEEEEeec
Q 009715 389 YRFGSVGQDTRLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 389 ~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 416 (528)
.++++-+.|+++|+||+++++++.....
T Consensus 232 ~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 232 RYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred cEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4899999999999999999999888765
No 363
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=40.38 E-value=3.5e+02 Score=28.42 Aligned_cols=68 Identities=10% Similarity=-0.020 Sum_probs=40.7
Q ss_pred EEcCCCCEEEEE----------eCCCcEEEEECCCCe-------EEEE-ee-cCCCCeEEEEEecCCCCCCCCCCcccee
Q 009715 328 AWSMDGKYILTG----------GEDDLVQVWSMEDRK-------VVAW-GE-GHNSWVSGVAFDSYWSQPNSDGTAETVM 388 (528)
Q Consensus 328 ~~sp~g~~l~sg----------~~dg~v~vwd~~~~~-------~~~~-~~-~h~~~V~~v~f~p~~~~~~~dg~~~~~~ 388 (528)
..+.++.+++.. ...+.|.+.|+.... .... +. .....+..+.|.. +.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~------ 361 (711)
T 4hvt_A 295 QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTK-------DR------ 361 (711)
T ss_dssp EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECS-------SC------
T ss_pred eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEEC-------CE------
Confidence 445566655532 135678889887631 1222 22 2234577888876 54
Q ss_pred EEEEEEeCCCe--EEEEEccCCe
Q 009715 389 YRFGSVGQDTR--LLLWDLEMDE 409 (528)
Q Consensus 389 ~~l~s~s~D~~--i~lwd~~~~~ 409 (528)
++++...++. |.++|+.+++
T Consensus 362 -l~~~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 362 -VFLATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp -EEEEEEETTEEEEEEECEETTE
T ss_pred -EEEEEEECCEEEEEEEECCCCc
Confidence 6777777764 6777877664
No 364
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=35.35 E-value=2.7e+02 Score=25.66 Aligned_cols=206 Identities=11% Similarity=0.041 Sum_probs=108.3
Q ss_pred CCCCeEEEEecCCcEEEEEccccccc-cccceeeeeeeccCCcccCCceeEEEEeeCCCcEEEEEeCCceEEEEEcCCCC
Q 009715 166 KDGHDLLIGLNSGDVYSVSLRQQLQD-VGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDG 244 (528)
Q Consensus 166 ~~~~~l~~g~~~G~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~g~~~l~tg~~dg~v~vwd~~~~~ 244 (528)
++...+++-+.+|-|+-..+..-... ....-.....+ ...+.+..+......+ .++..+..|.++-+....-.
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~l-----ke~D~l~~~~~~~~~~-~ll~~T~~G~~~~~~~~~ip 79 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDL-----NDGDEIVIALCVNTHD-YLFMISNEGKLYLINAYEIK 79 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCC-----CTTCCEEEEEEEETTC-EEEEEETTSEEEEEEGGGSC
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceeccc-----CCCCEEEEEEEECCCC-EEEEEECCCeEEEEEHHHCC
Confidence 35567888999999998877541100 00000000011 1334555555555555 68888889998877764210
Q ss_pred CCCCccccccccceeEEeccCCCCCCCeEEEeecCCCeEEEEECC---CCCEEEEEeCCCcEEEEecCC-------ceEE
Q 009715 245 AGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFST---DGTYLATVGRDGYLRVFDYSK-------EQLI 314 (528)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp---dg~~l~s~~~dg~i~vwd~~~-------~~~~ 314 (528)
.....-....-.. .+. +.. ...|..+...+ +..+|+..+.+|.++...+.. |...
T Consensus 80 ~~~r~~~G~~i~~-------------~l~-l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~ 144 (312)
T 1suu_A 80 DSSRASKGQNISE-------------LIN-LGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIV 144 (312)
T ss_dssp C-------CBGGG-------------TSC-CCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEEC
T ss_pred CCCccCCCcChhh-------------ccC-CCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEE
Confidence 0000000000000 000 000 12333332222 456788899999999888743 2222
Q ss_pred eeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC---------CeEEEEeecCCCCeEEEEEecCCCCCCCCCCcc
Q 009715 315 CGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMED---------RKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAE 385 (528)
Q Consensus 315 ~~~~~~~~~v~~l~~sp~g~~l~sg~~dg~v~vwd~~~---------~~~~~~~~~h~~~V~~v~f~p~~~~~~~dg~~~ 385 (528)
..+.. .+.+..+........++..+.+|.+..+.... |.....+. ....|..+..-. ++
T Consensus 145 i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~-------~~--- 212 (312)
T 1suu_A 145 IKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVK-------EN--- 212 (312)
T ss_dssp BCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECT-------TC---
T ss_pred EecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEEC-------CC---
Confidence 33333 45566665555556788888999998888753 11222232 234555555433 33
Q ss_pred ceeEEEEEEeCCCeEEEEEccC
Q 009715 386 TVMYRFGSVGQDTRLLLWDLEM 407 (528)
Q Consensus 386 ~~~~~l~s~s~D~~i~lwd~~~ 407 (528)
..++..+..|..+..++..
T Consensus 213 ---~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 213 ---PYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp ---SEEEEEETTSEEEEEEGGG
T ss_pred ---CeEEEEECCCceEEEEHHH
Confidence 2567778888888887754
No 365
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=26.54 E-value=5.2e+02 Score=26.24 Aligned_cols=45 Identities=18% Similarity=0.181 Sum_probs=31.2
Q ss_pred cCCCCeEEEEEecCCCCCCCCCCccceeEEEEEEeCCC----eEEEEEccCCeEEEEeec
Q 009715 361 GHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT----RLLLWDLEMDEIVVPLRR 416 (528)
Q Consensus 361 ~h~~~V~~v~f~p~~~~~~~dg~~~~~~~~l~s~s~D~----~i~lwd~~~~~~~~~~~~ 416 (528)
+|...+....|+| +.++ ..++.+.+++ -..+.|.++++.+.....
T Consensus 361 gHGDa~hv~dldP-------~r~G----lEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~ 409 (591)
T 2zux_A 361 GHGDALHTGDLDP-------GRPG----LEVFQVHEDKNAKYGLSFRDAATGKILWGVYA 409 (591)
T ss_dssp CCCSCEEEECCCT-------TSSS----CEEEEECCCTTSSCSEEEEETTTCCEEEEECC
T ss_pred CCCCeeEEeecCC-------CCCC----cEEEEEecCCCCCCccEEEECCCCcEEEEcCC
Confidence 7999888888988 5311 3466665542 355689999998877754
No 366
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=24.35 E-value=4.5e+02 Score=24.69 Aligned_cols=47 Identities=6% Similarity=-0.081 Sum_probs=26.5
Q ss_pred EEEEEcCC-CCEEEEEeCCCcEEEEECCCCeEEEEeecCCCCeEEEEEe
Q 009715 325 LCCAWSMD-GKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 372 (528)
Q Consensus 325 ~~l~~sp~-g~~l~sg~~dg~v~vwd~~~~~~~~~~~~h~~~V~~v~f~ 372 (528)
..++++|. ...|+.++.++.|..- .+.++.-..+..+-..+.+|+|.
T Consensus 344 ~~~~~~p~~~~~l~~g~~~g~l~~S-~D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 344 QAMTADAHAPVGVYFGTTGGEIWAS-ADEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp BSEEECCSSSCCEEEECTTSCEEEE-SSTTSBCEEEECSCSCEEEEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEE-CCCCCCceEcccCCCCeeEEEEe
Confidence 35788874 3456666666665432 23344434444444567788775
No 367
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=24.30 E-value=1.8e+02 Score=29.75 Aligned_cols=49 Identities=12% Similarity=0.183 Sum_probs=35.1
Q ss_pred EEEEEcCCCCEEEEEeCC------------CcEEEEECCCCeEEEEeecC-CCCeEEEEEec
Q 009715 325 LCCAWSMDGKYILTGGED------------DLVQVWSMEDRKVVAWGEGH-NSWVSGVAFDS 373 (528)
Q Consensus 325 ~~l~~sp~g~~l~sg~~d------------g~v~vwd~~~~~~~~~~~~h-~~~V~~v~f~p 373 (528)
--|+|+|.|++++.-..+ ..+.+.+..+++..+.+.++ ...++.++|+|
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp 540 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP 540 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC
Confidence 458999999966654322 24666777778777666654 46799999999
No 368
>1b1v_A PSP1, protein (plasmatocyte-spreading peptide); insect cytokine, EGF-like; NMR {Synthetic} SCOP: j.8.1.1 PDB: 1b5n_A 1bqf_A 2eqh_A 2dj9_A 1hrl_A 1v28_A 2djc_A 1irr_A
Probab=20.36 E-value=43 Score=17.59 Aligned_cols=11 Identities=45% Similarity=0.924 Sum_probs=9.0
Q ss_pred ceeecCcceEE
Q 009715 25 TYFKTPEGRYK 35 (528)
Q Consensus 25 ~~~~~~~g~~~ 35 (528)
-|-.|+|||+|
T Consensus 10 gy~rtadgrck 20 (26)
T 1b1v_A 10 GYMRTADGRCK 20 (26)
T ss_dssp SCEECSSCCEE
T ss_pred cceECCCCccc
Confidence 47789999996
Done!