Query 009718
Match_columns 527
No_of_seqs 143 out of 1495
Neff 8.5
Searched_HMMs 46136
Date Thu Mar 28 16:30:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009718.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009718hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0361 Chaperonin complex com 100.0 4E-114 9E-119 826.0 36.6 515 6-523 8-527 (543)
2 cd03336 TCP1_beta TCP-1 (CTT o 100.0 8E-110 2E-114 890.8 60.6 513 7-521 2-516 (517)
3 PTZ00212 T-complex protein 1 s 100.0 1E-109 3E-114 891.5 60.1 517 6-524 10-531 (533)
4 KOG0363 Chaperonin complex com 100.0 3E-110 6E-115 794.8 41.7 526 1-526 1-526 (527)
5 TIGR02341 chap_CCT_beta T-comp 100.0 2E-108 5E-113 877.9 60.2 517 6-522 2-518 (519)
6 TIGR02347 chap_CCT_zeta T-comp 100.0 6E-107 1E-111 867.5 59.5 511 6-522 4-529 (531)
7 cd03340 TCP1_eta TCP-1 (CTT or 100.0 8E-107 2E-111 870.2 58.5 511 6-519 4-520 (522)
8 TIGR02339 thermosome_arch ther 100.0 8E-107 2E-111 869.4 58.3 507 6-518 4-519 (519)
9 TIGR02344 chap_CCT_gamma T-com 100.0 1E-106 3E-111 869.2 58.6 510 6-521 4-524 (525)
10 cd03343 cpn60 cpn60 chaperonin 100.0 1E-105 3E-110 860.9 58.1 507 6-518 3-516 (517)
11 TIGR02345 chap_CCT_eta T-compl 100.0 2E-105 4E-110 858.0 57.5 510 6-519 6-520 (522)
12 cd03335 TCP1_alpha TCP-1 (CTT 100.0 2E-105 3E-110 860.2 57.2 502 13-520 3-527 (527)
13 TIGR02342 chap_CCT_delta T-com 100.0 2E-105 4E-110 856.9 57.2 500 14-519 5-517 (517)
14 TIGR02343 chap_CCT_epsi T-comp 100.0 3E-105 6E-110 856.9 57.1 509 6-518 13-531 (532)
15 cd03339 TCP1_epsilon TCP-1 (CT 100.0 4E-105 9E-110 856.7 56.5 508 6-517 9-526 (526)
16 TIGR02346 chap_CCT_theta T-com 100.0 1E-104 3E-109 851.2 59.4 515 6-527 5-528 (531)
17 TIGR02340 chap_CCT_alpha T-com 100.0 7E-104 2E-108 848.1 59.3 506 12-523 6-534 (536)
18 cd03338 TCP1_delta TCP-1 (CTT 100.0 6E-104 1E-108 847.2 57.1 501 12-518 2-515 (515)
19 cd03342 TCP1_zeta TCP-1 (CTT o 100.0 2E-102 5E-107 826.0 54.5 478 8-519 2-483 (484)
20 cd03337 TCP1_gamma TCP-1 (CTT 100.0 9E-101 2E-105 813.7 50.4 465 6-517 4-479 (480)
21 KOG0358 Chaperonin complex com 100.0 1E-101 3E-106 738.8 35.3 500 13-518 21-533 (534)
22 cd03341 TCP1_theta TCP-1 (CTT 100.0 7.8E-98 2E-102 789.7 52.2 460 14-518 4-471 (472)
23 cd00309 chaperonin_type_I_II c 100.0 7.3E-97 2E-101 784.5 52.9 458 13-517 3-464 (464)
24 COG0459 GroL Chaperonin GroEL 100.0 3.8E-97 8E-102 780.2 48.9 502 10-522 3-517 (524)
25 PF00118 Cpn60_TCP1: TCP-1/cpn 100.0 3.3E-94 7.2E-99 771.8 48.4 482 30-520 1-485 (485)
26 PRK00013 groEL chaperonin GroE 100.0 4.7E-91 1E-95 744.0 50.8 463 12-524 4-529 (542)
27 PRK12849 groEL chaperonin GroE 100.0 1.1E-90 2.5E-95 741.1 50.9 458 13-522 5-526 (542)
28 PTZ00114 Heat shock protein 60 100.0 5.7E-90 1.2E-94 739.5 52.8 462 12-523 16-544 (555)
29 PRK12851 groEL chaperonin GroE 100.0 1.1E-89 2.3E-94 734.4 51.0 462 13-525 6-530 (541)
30 KOG0362 Chaperonin complex com 100.0 1.2E-89 2.6E-94 678.6 43.0 513 4-526 11-528 (537)
31 cd03344 GroEL GroEL_like type 100.0 4E-89 8.8E-94 727.5 49.9 453 13-517 3-519 (520)
32 PRK12850 groEL chaperonin GroE 100.0 1.2E-88 2.5E-93 726.8 50.8 461 13-524 6-529 (544)
33 PRK12852 groEL chaperonin GroE 100.0 1.5E-88 3.3E-93 727.8 51.0 459 13-522 6-528 (545)
34 KOG0360 Chaperonin complex com 100.0 8.6E-91 1.9E-95 681.9 29.6 508 11-525 12-542 (545)
35 TIGR02348 GroEL chaperonin Gro 100.0 3.4E-88 7.4E-93 721.9 50.9 456 13-520 4-523 (524)
36 KOG0364 Chaperonin complex com 100.0 1.1E-90 2.5E-95 674.9 27.4 513 6-524 7-526 (527)
37 CHL00093 groEL chaperonin GroE 100.0 6.2E-87 1.4E-91 712.9 47.3 460 13-521 5-527 (529)
38 PRK14104 chaperonin GroEL; Pro 100.0 5.2E-86 1.1E-90 705.8 50.4 461 13-524 6-530 (546)
39 PLN03167 Chaperonin-60 beta su 100.0 1.4E-85 3.1E-90 705.8 45.3 462 13-522 59-584 (600)
40 KOG0359 Chaperonin complex com 100.0 3.1E-82 6.7E-87 615.1 30.5 504 6-520 5-516 (520)
41 KOG0357 Chaperonin complex com 100.0 1.2E-68 2.6E-73 505.7 22.6 379 6-520 14-397 (400)
42 KOG0356 Mitochondrial chaperon 100.0 2.4E-54 5.2E-59 434.5 24.0 457 12-523 18-541 (550)
43 cd03334 Fab1_TCP TCP-1 like do 100.0 5.8E-39 1.3E-43 313.4 25.3 227 168-402 17-257 (261)
44 cd03333 chaperonin_like chaper 100.0 2.2E-35 4.7E-40 280.9 22.5 203 152-397 2-208 (209)
45 KOG0230 Phosphatidylinositol-4 99.8 6.7E-20 1.4E-24 203.2 15.8 232 169-408 332-576 (1598)
46 cd00851 MTH1175 This uncharact 44.6 66 0.0014 26.0 5.8 44 272-317 54-97 (103)
47 PF02579 Nitro_FeMo-Co: Dinitr 43.5 70 0.0015 25.3 5.7 43 273-317 45-87 (94)
48 COG1433 Uncharacterized conser 35.9 1.5E+02 0.0032 25.4 6.6 39 273-312 57-95 (121)
49 COG3962 Acetolactate synthase 34.9 31 0.00067 36.3 2.7 40 383-423 217-256 (617)
50 cd00562 NifX_NifB This CD repr 34.5 1.3E+02 0.0029 24.0 6.1 38 273-311 53-90 (102)
51 COG0466 Lon ATP-dependent Lon 30.3 6.1E+02 0.013 28.8 11.6 159 227-397 464-652 (782)
52 smart00574 POX domain associat 27.9 1.7E+02 0.0036 25.7 5.6 46 376-421 84-129 (140)
53 PF07526 POX: Associated with 21.8 2E+02 0.0044 25.3 5.1 46 376-421 84-129 (140)
54 KOG2663 Acetolactate synthase, 21.4 93 0.002 30.0 3.1 27 366-393 121-147 (309)
No 1
>KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.1e-114 Score=826.02 Aligned_cols=515 Identities=35% Similarity=0.561 Sum_probs=497.6
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+||+|++..+|.-++-+|+.||..+++.++|||||+|+||+|++.. |+++|||||+||||-|++.||+|+.|++++++
T Consensus 8 ~lkegtd~sqGk~QlvSNInaC~~v~e~~rtTLGP~GmDkLivd~~--g~~tIsNDGATIlKlldivhPaaktlVdia~s 85 (543)
T KOG0361|consen 8 LLKEGTDPSQGKGQLVSNINACTAVAEALRTTLGPRGMDKLIVDSK--GKTTISNDGATILKLLDIVHPAAKTLVDIARS 85 (543)
T ss_pred EeecccCcccCchhhhhchHHHHHHHHHHHhccCccccceeeecCC--CcEEEecCcHHHHHHHhhcChhHHHHHHHHhh
Confidence 6799999999999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCc-hhhhHHHHHHHHHHhhcc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKEN-AETFKSDLMKIAMTTLSS 164 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~-~~~~~~~l~~i~~t~l~s 164 (527)
||.++||||||||+|++++|+++..+++.|+||..|+++|+.|...|++.++++++.++.. ...-++.|++++.|+++|
T Consensus 86 QDaEVGDGTTSVv~la~E~lk~~Kpfiedgv~~~~iir~~rka~~l~v~ki~elav~i~~~~~~~~r~lL~KcA~T~lsS 165 (543)
T KOG0361|consen 86 QDAEVGDGTTSVVLLAAEFLKEAKPFIEDGVHPQLIIRAYRKARQLAVEKIKELAVEIDGSSKTELRELLEKCAATALSS 165 (543)
T ss_pred ccccccCCceeEeeeHHHHHHhhhhHhhcCCCHHHHHHHHHHHHHHHHHHHHHheeEecccchhhHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999988743 233467899999999999
Q ss_pred cccchhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCCC----CCccccCcceEEeeeccc
Q 009718 165 KILSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIG----QPKRIENAKILVANTAMD 240 (527)
Q Consensus 165 K~~~~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~----~~~~~~n~~Ill~~~~Le 240 (527)
|.+.++.++|+++++||+..++...+++.|-|.|++||+++||.+++|+.|++.|+|. +|+++.||||+++|..||
T Consensus 166 KlI~~ek~fF~~MvVDAV~~ld~~l~~~mIGIKKV~GG~~~dS~lv~GVAFkKtFsYAGfEqqPKk~~NpkIl~LnvELE 245 (543)
T KOG0361|consen 166 KLIRQEKEFFAKMVVDAVLTLDNDLDLNMIGIKKVPGGAMEDSLLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNVELE 245 (543)
T ss_pred hhhhhhHHHHHHHHHHHHHhhccccchhhcceeecCCCccchhhhccceeeeehccccchhhCccccCCceEEEEeeeee
Confidence 9999999999999999999998888889999999999999999999999999999864 799999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009718 241 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 320 (527)
Q Consensus 241 ~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~ 320 (527)
.. .+..++++.+.++++++...++||+.+++++++|.+.|+++|++...|.|++.+||++++|+|..||+.+||.|+..
T Consensus 246 lK-aEkdNAEiRv~~v~eyQ~iVDAEW~Ii~~KL~ki~~sGAnVVLSkLpIGD~ATQyFAdrdiFCAGRV~~eDl~Rv~~ 324 (543)
T KOG0361|consen 246 LK-AEKDNAEIRVDNVEEYQAIVDAEWNIIYDKLDKIHESGANVVLSKLPIGDLATQYFADRDIFCAGRVPEEDLNRVMQ 324 (543)
T ss_pred ec-ccccCceeecCCHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEecccchHHHHHHhhccCceecCcCCHHHHHHHHH
Confidence 84 45556999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCc
Q 009718 321 VTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSR 400 (527)
Q Consensus 321 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~ 400 (527)
++|+++.++..++.+..+|.|..|++..+|++||-+|+||+..+.||++|||+.++.++|.+|++|||++++|.++++..
T Consensus 325 acGGsi~tt~~~i~~~~LG~C~~FeE~QvG~eRyN~Fegcp~aktcTliLRGgaeqfieE~eRSlHDAImIVrralkn~~ 404 (543)
T KOG0361|consen 325 ACGGSIQTTVSDIKEEVLGTCALFEERQVGGERYNLFEGCPKAKTCTLILRGGAEQFIEETERSLHDAIMIVRRALKNDS 404 (543)
T ss_pred hcCcchhhhhhhcchhhcchhhhHHHHhhcchhhhhhcCCCccceeEEEEeccHHHHHHHHhhhhhhHHHHHHHHhccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcc
Q 009718 401 VLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSV 480 (527)
Q Consensus 401 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~ 480 (527)
||+|||++||+++++|++|+..+.+++|+.+.+|++|||.|||+||+|+|+|..+++.+||..|++|..|+|+|.+++.+
T Consensus 405 vVaGGGaiEMElSk~lRd~S~ti~gK~q~~i~A~akalEvIPrqLc~NaGfDa~~ilnkLR~rHA~G~~w~Gvdi~~e~i 484 (543)
T KOG0361|consen 405 VVAGGGAIEMELSKYLRDYSRTIAGKQQLFINAYAKALEVIPRQLCDNAGFDATNILNKLRQRHAQGEKWYGVDINTEGI 484 (543)
T ss_pred EeeCCceeeehHHHHHHHhhcccCcHHHHHHHHHHHHHHHhHHHHhhhcCCcHHHHHHHHHHHhhcCCceeeeeecccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCC
Q 009718 481 GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRR 523 (527)
Q Consensus 481 ~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~ 523 (527)
.|+++.+||||..||++++..|+|+||+||.+|+.|++++.++
T Consensus 485 ~dn~~~~VwEP~~VK~Nai~aateAa~lIlsvDeTikn~~S~~ 527 (543)
T KOG0361|consen 485 ADNFEKFVWEPSIVKINAITAATEAACLILSVDETIKNPKSQS 527 (543)
T ss_pred hhHHHhhccChHHHHHHHHHHHHHhhhheEehhhhhcCCcccC
Confidence 9999999999999999999999999999999999999977543
No 2
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=7.6e-110 Score=890.79 Aligned_cols=513 Identities=76% Similarity=1.120 Sum_probs=492.1
Q ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCcccccccccc--CCCCceEEccChHHHhhhccccChHHHHHHHHHh
Q 009718 7 FRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQST--GRGREVTVTNDGATILKSLHIDNPAAKVLVDISK 84 (527)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~--~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~ 84 (527)
++++++..+|++++..|+.||..++++++|||||+||+|||+++ . |+++|||||+||+++|+++||+++|++++|+
T Consensus 2 ~~~~~~~~~~~~a~~~n~~~~~~i~~~v~tslGP~G~~Kmi~~~~~~--g~~~iTnDG~tIlk~l~~~hP~akll~~~a~ 79 (517)
T cd03336 2 LKDGAQEEKGETARLSSFVGAIAIGDLVKTTLGPKGMDKILQSVGRS--GGVTVTNDGATILKSIGVDNPAAKVLVDISK 79 (517)
T ss_pred CCCccccccHHHHHHHHHHHHHHHHHHHhcCCCCCcCceEeecCCCC--CCeEEeccHHHHHHHccCcChHHHHHHHHHH
Confidence 46777889999999999999999999999999999999999997 4 9999999999999999999999999999999
Q ss_pred hhhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcc
Q 009718 85 VQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSS 164 (527)
Q Consensus 85 ~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~s 164 (527)
+|++++||||||+|+|+++||+++.+|+++|+||+.|++||+.|.+.+++.|+++++|++.+.+.+++.|+++++|+++|
T Consensus 80 ~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~t~lss 159 (517)
T cd03336 80 VQDDEVGDGTTSVTVLAAELLREAEKLVAQKIHPQTIIEGYRMATAAAREALLSSAVDHSSDEEAFREDLLNIARTTLSS 159 (517)
T ss_pred HHHhHhCCChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcccccchhHHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999999999999999999999999988533222357899999999999
Q ss_pred cccchhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCCCCCccccCcceEEeeeccccccc
Q 009718 165 KILSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKV 244 (527)
Q Consensus 165 K~~~~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~Ill~~~~Le~~~~ 244 (527)
|+.+.++++|++++++|+..+++.+++++|++.+++|++++||++++|+++++++.+.||+.++||||++++++|+++++
T Consensus 160 k~~~~~~~~l~~l~~~A~~~v~~~~~~~~i~i~ki~G~s~~ds~l~~G~v~~~~~~~~~~~~~~n~kIli~~~~le~~~~ 239 (517)
T cd03336 160 KILTQDKEHFAELAVDAVLRLKGSGNLDAIQIIKKLGGSLKDSYLDEGFLLDKKIGVNQPKRIENAKILIANTPMDTDKI 239 (517)
T ss_pred cccchhHHHHHHHHHHHHHHhhccCCccceeEEEccCCCccceEEEeeEEEecccCCCCCCeeccccEEEEecCCCcccc
Confidence 99999999999999999999987788899999999999999999999999999876778999999999999999999998
Q ss_pred cccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCC
Q 009718 245 KIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 324 (527)
Q Consensus 245 ~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa 324 (527)
+.+++++.+++++++..+++.|+++++++++.|++.++++++++++|+|.+++||.++||++++++++++|+|||++|||
T Consensus 240 ~~~~~~~~~~~~~~~~~l~~~E~~~~~~~v~~I~~~gv~~v~~~~~I~~~~~~~l~~~~I~av~~v~~~~L~rIa~~tGa 319 (517)
T cd03336 240 KIFGAKVRVDSTAKVAEIEEAEKEKMKNKVEKILKHGINCFINRQLIYNYPEQLFADAGIMAIEHADFDGVERLALVTGG 319 (517)
T ss_pred cccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHCCcEEEecCCHHHHHHHHHHhCC
Confidence 87667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccC
Q 009718 325 EIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFG 404 (527)
Q Consensus 325 ~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpG 404 (527)
+++++++++++.++|+|+.|++..+|+++|++|++|+++++|||+|||+|+.+++|.+|+++||++++|++++++++|||
T Consensus 320 ~ii~~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpG 399 (517)
T cd03336 320 EIASTFDHPELVKLGTCKLIEEIMIGEDKLIRFSGVAAGEACTIVLRGASQQILDEAERSLHDALCVLAQTVKDTRVVLG 399 (517)
T ss_pred EEecccCCCCcccccccceEEEEEECCeEEEEEEccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeC
Confidence 99999999999999999999999999999999999999899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccc
Q 009718 405 GGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMA 484 (527)
Q Consensus 405 GG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~ 484 (527)
||++|++|+.+|+++++..++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.+++.++|||+.+|++.||+
T Consensus 400 GGa~e~~ls~~l~~~~~~~~~~~~~~i~~~a~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~ 479 (517)
T cd03336 400 GGCSEMLMAKAVEELAKKTPGKKSLAIEAFAKALRQLPTIIADNAGYDSAELVAQLRAAHYNGNTTAGLDMRKGTVGDMK 479 (517)
T ss_pred CCHHHHHHHHHHHHHhhhCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCceeeecCCCCccchh
Confidence 99999999999999998889999999999999999999999999999999999999999988888899999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCC
Q 009718 485 ELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPR 521 (527)
Q Consensus 485 ~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~ 521 (527)
+.|||||+.||+++|+.|+|+|++|||||++|..+|+
T Consensus 480 ~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~~ 516 (517)
T cd03336 480 ELGITESFKVKRQVLLSASEAAEMILRVDDIIKCAPR 516 (517)
T ss_pred hcCceecHHHHHHHHHHHHHHHHHHHhHhHHhhcCCC
Confidence 9999999999999999999999999999999999873
No 3
>PTZ00212 T-complex protein 1 subunit beta; Provisional
Probab=100.00 E-value=1.2e-109 Score=891.51 Aligned_cols=517 Identities=72% Similarity=1.071 Sum_probs=496.6
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCcccccccccc-----CCCCceEEccChHHHhhhccccChHHHHHH
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQST-----GRGREVTVTNDGATILKSLHIDNPAAKVLV 80 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~-----~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~ 80 (527)
+++++++..+|++++..|+.||..++++++|||||+||+|||++. . |+++|||||+||+++|+++||+++|++
T Consensus 10 ~~~~~~~~~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~Kmi~~~~~~~~~--G~~~iTnDG~TIlk~i~~~hP~akll~ 87 (533)
T PTZ00212 10 VLKQGAQEEKGETARLQSFVGAIAVADLVKTTLGPKGMDKILQPMSEGPRS--GNVTVTNDGATILKSVWLDNPAAKILV 87 (533)
T ss_pred HhcCCcccccHHHHHHHHHHHHHHHHHHHhCCCCCCccceEeecCCCcccC--CCEEEeccHHHHHHhccCcCHHHHHHH
Confidence 678888999999999999999999999999999999999999998 5 999999999999999999999999999
Q ss_pred HHHhhhhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHH
Q 009718 81 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMT 160 (527)
Q Consensus 81 ~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t 160 (527)
++|++|++++||||||+|+|+++||+++.+|+++|+||+.|++||+.|++.+++.|+++++|++.++..+.+.|.++++|
T Consensus 88 ~~a~~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~t 167 (533)
T PTZ00212 88 DISKTQDEEVGDGTTSVVVLAGELLREAEKLLDQKIHPQTIIEGWRMALDVARKALEEIAFDHGSDEEKFKEDLLNIART 167 (533)
T ss_pred HHHHhhhhhhCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCccchhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999865433345789999999
Q ss_pred hhcccccchhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCCCCCccccCcceEEeeeccc
Q 009718 161 TLSSKILSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMD 240 (527)
Q Consensus 161 ~l~sK~~~~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~Ill~~~~Le 240 (527)
+++||+.+.+.+.|++++++|+..+.+.++++.|++.+++||+++||++++|+++++++.+.||++++||||++++++||
T Consensus 168 ~l~sk~~~~~~~~l~~i~~~av~~i~~~~~~~~I~i~ki~Ggsi~ds~lv~G~v~~~~~~~~~~~~i~n~kIll~~~~Le 247 (533)
T PTZ00212 168 TLSSKLLTVEKDHFAKLAVDAVLRLKGSGNLDYIQIIKKPGGTLRDSYLEDGFILEKKIGVGQPKRLENCKILVANTPMD 247 (533)
T ss_pred HhcccccchhHHHHHHHHHHHHHHHhccCCccceEEEEecCcCccccEEEEeEEEecccCCCCCccccCCcEEEEeCCCC
Confidence 99999999999999999999999998778889999999999999999999999999998778999999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009718 241 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 320 (527)
Q Consensus 241 ~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~ 320 (527)
+++++.+++++.+++++++..+++.|+++++++++.|++.++++++++++|+|.+++||.++||++++|+++++++|||+
T Consensus 248 ~~k~~~~~~~~~i~~~~~~~~l~~~E~~~i~~~v~~Ii~~gv~vvv~~~~I~d~a~~~L~~~~I~avr~v~~~~l~rIa~ 327 (533)
T PTZ00212 248 TDKIKIYGAKVKVDSMEKVAEIEAAEKEKMKNKVDKILAHGCNVFINRQLIYNYPEQLFAEAGIMAIEHADFDGMERLAA 327 (533)
T ss_pred CCcccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHCCCEEEecCCHHHHHHHHH
Confidence 99998766788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCc
Q 009718 321 VTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSR 400 (527)
Q Consensus 321 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~ 400 (527)
+|||+++++++++++.++|+|+.|++..+|+++|++|++|+.+++|||+|||+|+.+++|+||+++||++++|+++++++
T Consensus 328 ~tGa~iis~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~er~i~DAl~vv~~~i~~~~ 407 (533)
T PTZ00212 328 ALGAEIVSTFDTPEKVKLGHCDLIEEIMIGEDKLIRFSGCAKGEACTIVLRGASTHILDEAERSLHDALCVLSQTVKDTR 407 (533)
T ss_pred HhCCEEeecCCCCCHHHccCCceEEEEEECCeEEEEEEccCCCCEEEEEEECCChhHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999999999999999999999999999899999999999999999999999999999999999999
Q ss_pred cccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcc
Q 009718 401 VLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSV 480 (527)
Q Consensus 401 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~ 480 (527)
+|||||++|++|+.+|+++++..++++++++++|++||+.||++|++|||+|+.+++.+|+..|.+++.++|+|+.+|++
T Consensus 408 vVpGGGa~e~~ls~~L~~~~~~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~~~~~~G~d~~~g~i 487 (533)
T PTZ00212 408 VVLGGGCSEMLMANAVEELAKKVEGKKSLAIEAFAKALRQIPTIIADNGGYDSAELVSKLRAEHYKGNKTAGIDMEKGTV 487 (533)
T ss_pred EeeCCCHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCccceeccCCcc
Confidence 99999999999999999999888999999999999999999999999999999999999999998888889999999999
Q ss_pred cccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCC
Q 009718 481 GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRE 524 (527)
Q Consensus 481 ~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~ 524 (527)
.||++.|||||+.+|+++|+.|+|+|++|||||++|...|+.++
T Consensus 488 ~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~ 531 (533)
T PTZ00212 488 GDMKELGITESYKVKLSQLCSATEAAEMILRVDDIIRCAPRQRE 531 (533)
T ss_pred cchhhccceecHHHHHHHHHHHHHHHHHHHhhhHhhhcCCcccC
Confidence 99999999999999999999999999999999999999875544
No 4
>KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-110 Score=794.82 Aligned_cols=526 Identities=75% Similarity=1.080 Sum_probs=513.6
Q ss_pred CcccccccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHH
Q 009718 1 MGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLV 80 (527)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~ 80 (527)
||...++++++.+++|+.+|.+.+.|+..+.++|||||||+||+||++...+.|.+.+||||+|||+++.+.||+||+|+
T Consensus 1 m~p~~i~~~~~~eErge~ArlssfvGaiaigDlvKsTLGPKGMdKiL~s~~~~~~v~VTNDGAtILksi~vDnpaAkvLv 80 (527)
T KOG0363|consen 1 MNPVQIFKDGATEERGENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSTGRAGTVMVTNDGATILKSIGVDNPAAKVLV 80 (527)
T ss_pred CChhhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhccCcchHHHHHhccCCCCceEEecchHHHHHhcCCCCchhhhee
Confidence 66444899999999999999999999999999999999999999999986545789999999999999999999999999
Q ss_pred HHHhhhhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHH
Q 009718 81 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMT 160 (527)
Q Consensus 81 ~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t 160 (527)
+.++-||.++|||||||++|+++||++|.+|+.+.+||+.|+.||+.|.+.+.+.|.+.++....+.+.|+++|+++++|
T Consensus 81 ~~S~vQD~EvGDGTTSV~vlaaeLlreAeklv~~kiHPq~Ii~GyR~A~~~a~eaL~~~s~dns~~~~kfr~DLl~iarT 160 (527)
T KOG0363|consen 81 DISKVQDDEVGDGTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRMATAAALEALTKSSIDNSSDKEKFREDLLKIART 160 (527)
T ss_pred ccccccccccCCCceehHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998887778899999999999
Q ss_pred hhcccccchhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCCCCCccccCcceEEeeeccc
Q 009718 161 TLSSKILSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMD 240 (527)
Q Consensus 161 ~l~sK~~~~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~Ill~~~~Le 240 (527)
+|+||+.+++.++|++|+++|+.++++..+++.|+|++..||+++||++.+||++++.+..++|+.++|+||++.|.+++
T Consensus 161 TL~SKiLsq~kehFaelavdAV~rLkGs~nL~~IqIIK~~Gg~l~dSfLDeGFlL~K~igv~qpkriena~iLIANT~mD 240 (527)
T KOG0363|consen 161 TLSSKILSQDKEHFAELAVDAVLRLKGSTNLEAIQIIKKLGGKLEDSFLDEGFLLDKKIGVNQPKRIENAKILIANTPMD 240 (527)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhcCCCCccceeeehhcCCccccccccccceeccccCCCCcccccccceEEecCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009718 241 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 320 (527)
Q Consensus 241 ~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~ 320 (527)
.+|.+.+++.+.+++...+..++.+|++.++.++++|.+.|+|+.++++-|.++..++|++.||+++.+.+++-+|||+.
T Consensus 241 tDKvKvfGarvrVds~~klaelE~AEkeKmK~KV~kI~~hgiN~FiNRQLiYnyPeqLf~dagi~aIEHADFdGiERLal 320 (527)
T KOG0363|consen 241 TDKVKVFGARVRVDSTAKLAELEKAEKEKMKEKVEKILKHGINVFINRQLIYNYPEQLFADAGIMAIEHADFDGIERLAL 320 (527)
T ss_pred ccceeeecceEeecchhHHHHHHHHHHHHHHHHHHHHHhcCCcEEeehhHhhcCHHHHHhhcCcceeecccchhHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCc
Q 009718 321 VTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSR 400 (527)
Q Consensus 321 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~ 400 (527)
+||+.|.++|++++...+|+|+.+++..+|++++++|+||+.+..|||+|||.|+++++|.+|++|||||++....++++
T Consensus 321 vtGGeI~STFd~p~~~klG~C~~IeeimiGed~li~FSGv~~GeActIVlrGat~q~LDEaeRslHDALcVLaqtv~esr 400 (527)
T KOG0363|consen 321 VTGGEIVSTFDNPELVKLGECDLIEEIMIGEDKLIKFSGVKLGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKESR 400 (527)
T ss_pred cccceeeeccCCcchhccccchhhHHHhcCccceeeecccccccceEEEEecccHHHHHHHHHHHHHHHHHHHHHhccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcc
Q 009718 401 VLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSV 480 (527)
Q Consensus 401 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~ 480 (527)
++.||||.||..|..+.+++...++++..++++|++||..+|.+||.|+|+|+.+++++||+.|.+|...+|+|+++|.+
T Consensus 401 vv~GgG~sEm~Ma~av~~~A~~~pGkea~AieAfarAL~qlPtiiaDNaG~dsaelva~Lra~h~~g~~t~Gld~~~G~i 480 (527)
T KOG0363|consen 401 VVLGGGCSEMLMAKAVDKEAQETPGKEALAIEAFARALRQLPTIIADNAGYDSAELVAQLRAEHYNGRTTMGLDVRNGEI 480 (527)
T ss_pred eeecCCcHHHHHHHHHHHHHhhCCchhhHHHHHHHHHHHhcchhhhccCCCCHHHHHHHHHHHhhcCCcccccccccCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCCCC
Q 009718 481 GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRREDR 526 (527)
Q Consensus 481 ~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~~~ 526 (527)
.||.+.||+|++.+|..++..|.|++.||||+|.||.+.|+++++.
T Consensus 481 ~dm~~~Gi~es~~vK~~vv~sasEaae~ilrvD~Iik~aPR~r~~~ 526 (527)
T KOG0363|consen 481 GDMRELGIVESLKVKQAVVSSASEAAEMILRVDNIIKAAPRERERD 526 (527)
T ss_pred hhHHHhhhHHHHHHHHHHHhhhHHHHHHHHhhhhhhhcCCcccccC
Confidence 9999999999999999999999999999999999999999998764
No 5
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT beta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=2.3e-108 Score=877.94 Aligned_cols=517 Identities=70% Similarity=1.049 Sum_probs=492.2
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+++++.+..++++++.+|+.|+.+++++++|||||+||+|||+++...|+++|||||+|||++|+++||+++|++++|++
T Consensus 2 ~~~~~~~~~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~~~G~~~iTnDG~tIlk~l~i~hP~akll~~~a~~ 81 (519)
T TIGR02341 2 IFKDNAQEERGENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSGSSESGIMVTNDGATILKSIGVDNPAAKVLVDMSKV 81 (519)
T ss_pred CccCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcCceEEeccCCCCCeEEeccHHHHHHHccCcChHHHHHHHHHHH
Confidence 56788889999999999999999999999999999999999999721189999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
|++++||||||+|+|+++||+++.+|+++|+||+.|++||+.|.+.+++.|+++++|++.+.+..++.|.++++|+++||
T Consensus 82 qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~L~~ia~t~l~sk 161 (519)
T TIGR02341 82 QDDEVGDGTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRRATKAAQEALKKSSIDNGSDKTKFRDDLLNIARTTLSSK 161 (519)
T ss_pred hHhhhCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999886432223578999999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCCCCCccccCcceEEeeecccccccc
Q 009718 166 ILSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVK 245 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~Ill~~~~Le~~~~~ 245 (527)
+.+.+.+.|++++++|+..+.+..+.++|+|.+++|+++++|++++|+++++.+.+.+|+.++||+|++++++|++++++
T Consensus 162 i~~~~~~~~s~l~~~av~~i~~~~~~~~i~i~k~~G~s~~~s~l~~G~v~~~~~~~~~~~~~~n~~Ili~~~~Le~~~~~ 241 (519)
T TIGR02341 162 ILSQHKDHFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSLNDSYLDEGFLLEKKIGVNQPKRIENAKILIANTPMDTDKVK 241 (519)
T ss_pred hhhhHHHHHHHHHHHHHHHhccCCChhheEEEEccCCCcccceEEeeEEEeccCCCCCceeeccccEEEEecCCCCCccc
Confidence 99999999999999999998666678889999999999999999999999999877889999999999999999999888
Q ss_pred ccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCc
Q 009718 246 IYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGE 325 (527)
Q Consensus 246 ~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ 325 (527)
.+++++.+++++++..++..|+++++++++.|++.|+++++++++|+|.+++||.+++|++++++++.+|+|||++|||+
T Consensus 242 ~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~I~~~g~~~v~~~~~I~~~~~~~l~~~~I~~v~~~~~~~l~~ia~~tGa~ 321 (519)
T TIGR02341 242 VFGSRVRVDSTAKVAELEAAEKEKMKEKVEKILKHNINCFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLALVTGGE 321 (519)
T ss_pred cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCcCCHHHHHHHHHCCcEEEecCCHHHHHHHHHHhCCE
Confidence 64578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCC
Q 009718 326 IASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGG 405 (527)
Q Consensus 326 ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGG 405 (527)
++++++++++.++|+|+.|++..+|+++|++|++|++++.|||+|||+|+.+++|++|+++||++++|++++++++||||
T Consensus 322 ii~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~~~~~~vvpGG 401 (519)
T TIGR02341 322 IVSTFDHPELVKLGSCDLIEEIMIGEDKLLKFSGVKLGEACTIVLRGATQQILDESERSLHDALCVLSQTVKESRTVLGG 401 (519)
T ss_pred EecccccCCccccccCceEEEEEECCEEEEEEEcCCCCCEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCC
Confidence 99999999999999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCccccccc
Q 009718 406 GWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAE 485 (527)
Q Consensus 406 G~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~ 485 (527)
||+|++++.+|+++++..++++++++++|++||+.|||+|++|||+|+.+++.+|+..|..++.++|+|+.+|++.||++
T Consensus 402 Ga~e~~ls~~l~~~~~~~~~~~~~~i~~~a~Ale~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~i~d~~~ 481 (519)
T TIGR02341 402 GCSEMLMSKAVAVEAQKVPGKEALAVEAFARALRQLPTIIADNAGFDSAELVAQLRAAHYNGNHTMGLDMEEGEIADMRK 481 (519)
T ss_pred CHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCccceecCCCcccchhh
Confidence 99999999999999888899999999999999999999999999999999999999999887778999999999999999
Q ss_pred CCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCC
Q 009718 486 LGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRR 522 (527)
Q Consensus 486 ~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~ 522 (527)
.|||||+.||+++|+.|+|+|++|||||++|.++|+.
T Consensus 482 ~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~~~ 518 (519)
T TIGR02341 482 LGIIESYKVKRAVVSSAAEAAEVILRVDNIIKAAPRA 518 (519)
T ss_pred ccceEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCCC
Confidence 9999999999999999999999999999999998853
No 6
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=5.8e-107 Score=867.54 Aligned_cols=511 Identities=30% Similarity=0.478 Sum_probs=485.4
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+++++.+...|.+++..|+.||..++++++|||||+||+|||+++. |+++|||||+||+++|+++||+++|++++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~ni~a~~~l~~~vkttlGP~G~~Kmi~~~~--G~~~ITnDG~TIlk~i~i~hP~a~ll~~~a~~ 81 (531)
T TIGR02347 4 LLNPKAESLRRDAALMMNINAARGLQDVLKTNLGPKGTLKMLVSGA--GDIKLTKDGNVLLNEMQIQHPTASMIARAATA 81 (531)
T ss_pred cccCCcccccHHHHHHHHHHHHHHHHHHHhcCCCCCccceEEEcCC--CCEEEeccHHHHHHhccccChHHHHHHHHHHH
Confidence 5678888999999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccC-CchhhhHHHHHHHHHHhhcc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNK-ENAETFKSDLMKIAMTTLSS 164 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~-~~~~~~~~~l~~i~~t~l~s 164 (527)
|++++||||||+++|+++||+++.+|+++|+||+.|++||+.|.+.+++.|++++++.. ..+ .+.|.++++|+++|
T Consensus 82 qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~---~~~l~~ia~tsl~s 158 (531)
T TIGR02347 82 QDDITGDGTTSTVILIGELLKQAERYILEGIHPRILTEGFEIARGELLEFLDKFKIKTEDEVD---RELLLNVARTSLRT 158 (531)
T ss_pred hhhhhcCcHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC---HHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999997753 211 47899999999999
Q ss_pred cccchhhhHHHHHHHHHHHhhccC---CCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeeccc
Q 009718 165 KILSQDKEHFGQLAVDAVMRLKGS---TNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMD 240 (527)
Q Consensus 165 K~~~~~~~~l~~li~~a~~~~~~~---~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~Le 240 (527)
|+.++++++|++++++|+..++++ +++++|+|++..|++.++|++++|++|++++. +.||+.++||+|++++++|+
T Consensus 159 K~~~~~~~~ls~iv~~Av~~v~~~~~~i~~~~I~i~k~~g~s~~ds~~v~Giv~~~~~~~~~~~~~~~n~~Ill~~~~le 238 (531)
T TIGR02347 159 KLPIDLADQLTEIVVDAVLAIKKDGEQIDLFMVEIMEMKHKSATDTTLIRGLVLDHGARHPDMPRRVKNAYILTCNVSLE 238 (531)
T ss_pred ccchhhHHHHHHHHHHHHHHHhhcCCCCChhHeEEEEecCCCccccEEEeeEEEecCcCCCCCceeccCceEEEEeCCCC
Confidence 999999999999999999999653 56678999999999999999999999999975 46899999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcC-------Ce---EEEeCccCCchHHHHHHHcCCeEEecC
Q 009718 241 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHG-------IN---CFVNRQLIYNFPEELFADAGILAIEHA 310 (527)
Q Consensus 241 ~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~-------v~---lvl~~~~I~~~~~~~l~~~~I~~i~~v 310 (527)
+++++.. .++.+.+++++..+...|++++++++++|++.+ ++ +|+|+++|+|.+++||.++||++++|+
T Consensus 239 ~~~~~~~-~~~~~~~~~~~~~~~~~E~~~l~~~v~~I~~~~~~~~~~~~~~~~lvi~~k~I~~~a~~~L~~~~I~~i~rv 317 (531)
T TIGR02347 239 YEKTEVN-SGFFYSNAEQREKLVEAERKFVDDRVKKIIELKKKVCGKSPDKGFVVINQKGIDPPSLDLLAKEGIMALRRA 317 (531)
T ss_pred CCccccC-ceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccEEEEeCCCccHHHHHHHHHCCceEEccC
Confidence 9988775 678999999999999999999999999999865 25 999999999999999999999999999
Q ss_pred ChhhHHHHHHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHH
Q 009718 311 DFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALC 390 (527)
Q Consensus 311 ~~~~L~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~ 390 (527)
++++|+|||++|||+++++++++++.++|+|+.|++..+++++|++|++|++++.|||+|||+|+.+++|++|+++||++
T Consensus 318 ~~~~le~ia~~tGa~~i~~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~ 397 (531)
T TIGR02347 318 KRRNMERLTLACGGEALNSVEDLTPECLGWAGLVYETSIGEEKYTFIEEVKNPKSCTILIKGPNDHTIKQIKDAVRDGLR 397 (531)
T ss_pred CHHHHHHHHHHhCCEEecccccCCccccccceEEEEEEECCeEEEEEEcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred HHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCc
Q 009718 391 VLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCP 470 (527)
Q Consensus 391 ~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~ 470 (527)
++|++++++++|||||++|++|+.+|+++++..++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.+++.+
T Consensus 398 v~~~~~~~~~vvpGGGa~E~~ls~~l~~~~~~~~~~~~~~i~~fa~ALe~ip~~La~NaG~d~~~vl~~l~~~~~~~~~~ 477 (531)
T TIGR02347 398 AVKNAIEDKCVVPGAGAFEIAAYCHLKEEKKSVKGKAKLGVEAFANALLVIPKTLAENSGLDAQDTLVKLEDEHDEGGEV 477 (531)
T ss_pred HHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCc
Confidence 99999999999999999999999999999888899999999999999999999999999999999999999999877778
Q ss_pred ceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCC
Q 009718 471 AGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRR 522 (527)
Q Consensus 471 ~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~ 522 (527)
+|+|+.+|++.||++.|||||+.+|+++|+.|+|+|++|||||++|.++|+.
T Consensus 478 ~Gid~~~g~~~d~~~~gV~Dp~~vk~~al~~A~e~a~~iLrID~ii~~~~~~ 529 (531)
T TIGR02347 478 VGVDLETGEPIDPEIKGIWDNYRVKKQLIQSATVIASQLLLVDEVMRAGRSM 529 (531)
T ss_pred eeeeccCCCccchhhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhCcccc
Confidence 9999999999999999999999999999999999999999999999987754
No 7
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=7.8e-107 Score=870.15 Aligned_cols=511 Identities=39% Similarity=0.594 Sum_probs=488.5
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+++++++...|.+++.+|+.||..++++++|||||+|++|||+++. |+++|||||+||+++|+++||+++|+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~ni~a~~~i~~~v~tslGP~G~~kmi~~~~--g~~~iTnDG~tIlk~l~~~hP~akll~~~a~~ 81 (522)
T cd03340 4 LLKEGTDTSQGKGQLISNINACQAIADAVRTTLGPRGMDKLIVDGR--GKVTISNDGATILKLLDIVHPAAKTLVDIAKS 81 (522)
T ss_pred cccCCcccccHHHHHHHHHHHHHHHHHHHhcCCCCCcCceEEEcCC--CCEEEeccHHHHHHHccccCHHHHHHHHHHHH
Confidence 5688888999999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCch-hhhHHHHHHHHHHhhcc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENA-ETFKSDLMKIAMTTLSS 164 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~-~~~~~~l~~i~~t~l~s 164 (527)
|++++||||||+|+|+++||+++.+|+++|+||+.|++||+.|++.+++.|+++++|++..+ ...++.|.++++|+++|
T Consensus 82 q~~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~~l~~ia~t~l~s 161 (522)
T cd03340 82 QDAEVGDGTTSVVVLAGEFLKEAKPFIEDGVHPQIIIRGYRKALQLAIEKIKEIAVNIDKEDKEEQRELLEKCAATALNS 161 (522)
T ss_pred hHhHhCCChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCcccccccHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999876531 12246799999999999
Q ss_pred cccchhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCC----CCCccccCcceEEeeeccc
Q 009718 165 KILSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI----GQPKRIENAKILVANTAMD 240 (527)
Q Consensus 165 K~~~~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~----~~~~~~~n~~Ill~~~~Le 240 (527)
|+.+.++++|++++++|+..++++++.++|+|++++||+++||++++|++|++++.+ .+|+.++||+|++++++||
T Consensus 162 K~~~~~~~~l~~l~~~A~~~v~~~~~~~~I~i~~i~Ggs~~ds~lv~Giv~~k~~~~~~~~~~~~~~~n~kIll~~~~Le 241 (522)
T cd03340 162 KLIASEKEFFAKMVVDAVLSLDDDLDLDMIGIKKVPGGSLEDSQLVNGVAFKKTFSYAGFEQQPKKFKNPKILLLNVELE 241 (522)
T ss_pred CcchhHHHHHHHHHHHHHHHhcccCChhHheEeeecCCChhhceeeeeEEEecccCccccccCCccccCCeEEEEeCCCC
Confidence 999999999999999999999888899999999999999999999999999999752 3689999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009718 241 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 320 (527)
Q Consensus 241 ~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~ 320 (527)
+++.+.. .++.+++++++..+.+.|+++++++++.|++.|+++|+++++|+|.+++||.++||++++|+++++|+|||+
T Consensus 242 ~~~~~~~-~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~vvl~~~~i~d~a~~~l~~~~I~~~~~v~~~~l~rIa~ 320 (522)
T cd03340 242 LKAEKDN-AEVRVEDPEEYQAIVDAEWKIIYDKLEKIVKSGANVVLSKLPIGDLATQYFADRDIFCAGRVPEEDLKRVAQ 320 (522)
T ss_pred CCccccc-eEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcHHHHHHHHHCCcEEEEeCCHHHHHHHHH
Confidence 9887764 678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCc
Q 009718 321 VTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSR 400 (527)
Q Consensus 321 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~ 400 (527)
+|||+++++++++++..+|+|+.|++..+|+++|++|++|+.++.+||+|||+++..++|++|+++||++++|+++++++
T Consensus 321 ~tGa~ii~~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~i~~~~ 400 (522)
T cd03340 321 ATGGSIQTTVSNITDDVLGTCGLFEERQVGGERYNIFTGCPKAKTCTIILRGGAEQFIEEAERSLHDAIMIVRRAIKNDS 400 (522)
T ss_pred HHCCEEeeccccCCccccccceEEEEEEECCEEEEEEECCCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCC-CcceEEccCCc
Q 009718 401 VLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEG-CPAGIDVISGS 479 (527)
Q Consensus 401 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~-~~~Gid~~~g~ 479 (527)
+|||||++|++++.+|+++++..++++++++++||+||+.||++|++|||+|+.+++.+|+..|.+++ .++|||+.+|+
T Consensus 401 vvpGGG~~E~~ls~~l~~~~~~~~~~~~~~~~~fa~aL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~ 480 (522)
T cd03340 401 VVAGGGAIEMELSKYLRDYSRTIAGKQQLVINAFAKALEIIPRQLCDNAGFDATDILNKLRQKHAQGGGKWYGVDINNEG 480 (522)
T ss_pred EEECcCHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCCeeeeeCCCCc
Confidence 99999999999999999998888999999999999999999999999999999999999999998776 78999999999
Q ss_pred ccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcC
Q 009718 480 VGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCA 519 (527)
Q Consensus 480 ~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~ 519 (527)
+.||++.|||||+.||+++|+.|+|+|++|||||++|.++
T Consensus 481 i~d~~~~gV~dp~~vk~~~i~~A~e~a~~iL~id~ii~~~ 520 (522)
T cd03340 481 IADNFEAFVWEPSLVKINALTAATEAACLILSVDETIKNP 520 (522)
T ss_pred ccchhhcCceEcHHHHHHHHHHHHHHHHHHhhhhhheeCC
Confidence 9999999999999999999999999999999999999874
No 8
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs.
Probab=100.00 E-value=8.3e-107 Score=869.37 Aligned_cols=507 Identities=41% Similarity=0.635 Sum_probs=485.5
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+++++.+..+|.+++.+|+.||..++++++|||||+||+|||+++. |+++|||||+||+++|+++||+++|+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~ni~~~~~i~~~v~tslGP~G~~k~i~~~~--g~~~iTnDG~tIlk~l~~~hP~a~ll~~~a~~ 81 (519)
T TIGR02339 4 ILKEGTQRTKGRDAQRNNIAAAKAVAEAVKSTLGPRGMDKMLVDSL--GDVTITNDGATILKEMDIEHPAAKMLVEVAKT 81 (519)
T ss_pred cccCCcccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeECCC--CCEEEEccHHHHHHhccCCCHHHHHHHHHHHH
Confidence 5678888999999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
|++++||||||+++|+++||+++.+|+++|+||+.|++||+.|++.+++.|+++++|++..+ ++.|.++++|+++||
T Consensus 82 qd~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~v~~~~---~~~L~~ia~tsl~sk 158 (519)
T TIGR02339 82 QDAEVGDGTTTAVVLAGELLEKAEDLLEQGIHPTVIIEGYRKAAEKALEIIDEIATKISPED---RDLLKKVAETSLTGK 158 (519)
T ss_pred HHHHhCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCccc---HHHHHHHHHhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999886432 467999999999999
Q ss_pred cc-chhhhHHHHHHHHHHHhhcc-------CCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEee
Q 009718 166 IL-SQDKEHFGQLAVDAVMRLKG-------STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVAN 236 (527)
Q Consensus 166 ~~-~~~~~~l~~li~~a~~~~~~-------~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~ 236 (527)
+. +.+.++|++++++|+.++++ .+++++|+|++++||++++|++++|++|++++. .+||+.++||||++++
T Consensus 159 ~~~~~~~~~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~Ggs~~ds~lv~G~vi~~~~~~~~m~~~i~n~kIlll~ 238 (519)
T TIGR02339 159 ASAEVTKDKLANLVVEAVKQVAEKRGDGKYYVDLDNIKIEKKTGGSIDDTELVEGIVVDKEPVHPGMPKRVKNAKIALLD 238 (519)
T ss_pred cccchhHHHHHHHHHHHHHHHhhhccCCCcccCHHHeEEEEccCcChhcceeEeeEEEecCCCCCCCccccCCCcEEEEe
Confidence 99 78999999999999998863 357789999999999999999999999999974 4689999999999999
Q ss_pred eccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHH
Q 009718 237 TAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIE 316 (527)
Q Consensus 237 ~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~ 316 (527)
++||+++++.. .++.+++++++.++.+.|+++++++++.|++.++++|+++++|++.+++||.++||++++++++++|+
T Consensus 239 ~~Le~~~~~~~-~~~~i~~~~~~~~~l~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~gI~~v~~v~~~~L~ 317 (519)
T TIGR02339 239 APLEVEKTEID-AKIRITDPDQIKKFLDQEEAMLKEMVDKIADAGANVVFCQKGIDDLAQHYLAKAGILAVRRVKKSDIE 317 (519)
T ss_pred ccccccccccc-eEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCCccHHHHHHHHHCCCEEEecCCHHHHH
Confidence 99999999875 77889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHh
Q 009718 317 RLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTV 396 (527)
Q Consensus 317 ~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~ 396 (527)
|||++|||+++++++++++..+|+|++|++..+|+++|++|++|..+..|||+|||||+.+++|.+|+++||++++|+++
T Consensus 318 rIa~~tGa~ii~~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~ 397 (519)
T TIGR02339 318 KLARATGAKIVSSIKEITESDLGYAGLVEERKVGDDKMTFVEGCKNPKAVTILLRGGTEHVVDELERSIQDALHVVASAL 397 (519)
T ss_pred HHHHHhCCEEeCchhhCChhhccCCceEEEEEECCeEEEEEEcCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hCCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEcc
Q 009718 397 NDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVI 476 (527)
Q Consensus 397 ~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~ 476 (527)
+++++|||||++|++|+.+|+++++..++++++++++|++||+.||++|++|||+|+.+++.+|+..|.+++.++|+|+.
T Consensus 398 ~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~ 477 (519)
T TIGR02339 398 EDGKVVAGGGAVEIELALRLRSYARKIGGREQLAIEAFADALEEIPRILAENAGLDPIDALVELRAKHEKGNKNAGINVF 477 (519)
T ss_pred cCCCEeeCCCHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCceeEEcC
Confidence 99999999999999999999999888899999999999999999999999999999999999999999877778999999
Q ss_pred CCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhc
Q 009718 477 SGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITC 518 (527)
Q Consensus 477 ~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~ 518 (527)
+|++.||++.|||||+.+|+++|+.|+|+|++|||||++|.+
T Consensus 478 ~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~ 519 (519)
T TIGR02339 478 TGEIEDMLELGVIEPLRVKEQAIKSATEAATMILRIDDVIAA 519 (519)
T ss_pred CCCccchhhccceEcHHHHHHHHHHHHHHHHHHHhHhHHhhC
Confidence 999999999999999999999999999999999999999863
No 9
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.2e-106 Score=869.17 Aligned_cols=510 Identities=31% Similarity=0.500 Sum_probs=485.3
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+++++.+..+|++++..|+.||..++++++|||||+||+|||+++. |+++|||||+|||++|+++||+++|++++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~ni~a~~~l~~~v~ttlGP~G~~k~i~~~~--g~~~iTnDG~tIl~~l~~~hP~akll~~~a~~ 81 (525)
T TIGR02344 4 VLNQNTKRESGRKAQLSNIQAAKAVADIIRTTLGPRAMLKMLLDPM--GGIVMTNDGNAILREIDVAHPAAKSMIELSRT 81 (525)
T ss_pred eccCCCccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCceEEcCC--CCEEEEccHHHHHHhccCCCHHHHHHHHHHHh
Confidence 4577788899999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
|++++||||||+|+|+++||+++.+|+++|+||+.|++||+.|.+.+++.|+++++|++..+ .+.|.++++|+++||
T Consensus 82 q~~~~GDGTtt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~---~~~l~~i~~t~l~sk 158 (525)
T TIGR02344 82 QDEEVGDGTTSVIILAGEMLSVAEPFLEQNIHPTIIIRAYKKALDDALSVLEEISIPVDVND---DAAMLKLIQSCIGTK 158 (525)
T ss_pred hhhhccCCcchhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCC---HHHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999999999999999999999999986532 367999999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhccC-------CCcc-cceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEee
Q 009718 166 ILSQDKEHFGQLAVDAVMRLKGS-------TNLE-SIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVAN 236 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~~~-------~~~~-~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~ 236 (527)
+.++|.+.|++++++|+..++++ +|++ +|+|.+++||+++||++++|++|++++. ..||++++||||++++
T Consensus 159 ~~~~~~~~ls~l~~~Ai~~v~~~~~~~~~~~d~~~~I~i~ki~Gg~~~dS~lv~Gvvi~k~~~~~~m~~~~~n~kIlll~ 238 (525)
T TIGR02344 159 FVSRWSDLMCDLALDAVRTVKRDLGNGRKEIDIKRYAKVEKIPGGDIEDSCVLKGVMINKDVTHPKMRRYIENPRIVLLD 238 (525)
T ss_pred cchhHHHHHHHHHHHHHHHhhccccCCCCccChhhceEEEEecCCChHhcCcccceEEecccCCCCCccccCCCCEEEEe
Confidence 99999999999999999998642 2333 4889999999999999999999999864 3689999999999999
Q ss_pred eccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHH
Q 009718 237 TAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIE 316 (527)
Q Consensus 237 ~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~ 316 (527)
++|++++++.. .++.+.+++++.++.+.|++++++++++|.+.++++|+++++|++.+++||.++||++++++++++|+
T Consensus 239 ~~Le~~~~~~~-~~i~i~~~~~~~~~l~~E~~~l~~~v~~i~~~~~~vIi~~k~I~dla~~~l~~~~I~av~~v~~~~Le 317 (525)
T TIGR02344 239 CPLEYKKGESQ-TNVEIMKEEDWNRILQMEEEYVQLMCEDIIAVKPDLVITEKGVSDLAQHYLLKANISAIRRVRKTDNN 317 (525)
T ss_pred ccccccccccc-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHCCceEEecCCHHHHH
Confidence 99999988875 78899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCccccccCCCCCCCCcc-cceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHH
Q 009718 317 RLALVTGGEIASTFDNPESVKLGH-CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQT 395 (527)
Q Consensus 317 ~la~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~ 395 (527)
|||++|||+++++++++++.++|+ |+.|++.++++++|++|++|+++++|||+|||+|+.+++|+||+++||+++++++
T Consensus 318 rIa~~tGa~ii~~l~~l~~~~lG~~~~~v~~~~ig~~~~~~~~g~~~~~~~TIlLrG~t~~~l~E~er~l~DAl~~vk~~ 397 (525)
T TIGR02344 318 RIARACGATIVNRPEELRESDVGTGCGLFEVKKIGDEYFTFFTECKDPKACTILLRGASKDVLNEIERNLQDAMAVARNV 397 (525)
T ss_pred HHHHHhCCeEecchhhCCHhhcCCcCCEEEEEEECCeEEEEEEcCCCCCEEEEEEEcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999998899999999999999999999999999999999
Q ss_pred hhCCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcC-CCcceEE
Q 009718 396 VNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE-GCPAGID 474 (527)
Q Consensus 396 ~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~-~~~~Gid 474 (527)
++++++|||||++|++||.+|+++++..++++|+++++|++||+.||++||+|||+|+.+++.+|+..|.++ +.++|+|
T Consensus 398 ~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~~~~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid 477 (525)
T TIGR02344 398 LLEPKLLPGGGATEMAVSVYLAKKASKLEGVQQWPYRAVADALEIIPRTLAQNCGVNVIRTLTELRAKHAQEGNCTWGID 477 (525)
T ss_pred HhCCCcccCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCCeEeEE
Confidence 999999999999999999999999888899999999999999999999999999999999999999999876 6789999
Q ss_pred ccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCC
Q 009718 475 VISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPR 521 (527)
Q Consensus 475 ~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~ 521 (527)
+.+|+++||++.|||||+.+|+++|+.|+|+|++|||||++|.+.|+
T Consensus 478 ~~~g~~~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~~ 524 (525)
T TIGR02344 478 GETGKIVDMKEKGIWEPLAVKLQTYKTAIESACMLLRIDDIVSGVKK 524 (525)
T ss_pred CCCCccccchhccceecHHHHHHHHHHHHHHHHHHHhhhHHhhcCCC
Confidence 99999999999999999999999999999999999999999988773
No 10
>cd03343 cpn60 cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=1.4e-105 Score=860.90 Aligned_cols=507 Identities=42% Similarity=0.656 Sum_probs=485.7
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+++++.+...|.+++..|+.||..+++++++||||+|++|||+++. |+++|||||+||+++|+++||+++|+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~n~~~~~~i~~~v~tslGP~G~~k~i~~~~--g~~~iTnDG~tIlk~l~~~hP~a~ll~~~a~~ 80 (517)
T cd03343 3 ILKEGTQRTSGRDAQRMNIAAAKAVAEAVRTTLGPKGMDKMLVDSL--GDVTITNDGATILKEMDIEHPAAKMLVEVAKT 80 (517)
T ss_pred ccCCCcccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCceeEcCC--CCEEEEccHHHHHHHccCcCHHHHHHHHHHHH
Confidence 4678888999999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
|++++||||||+++|+++|++++.+++++|+||..|++||+.|.+.+++.|++++++++.++ ++.|.++++|+++||
T Consensus 81 q~~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~---~~~l~~va~ts~~sk 157 (517)
T cd03343 81 QDEEVGDGTTTAVVLAGELLEKAEDLLDQNIHPTVIIEGYRLAAEKALELLDEIAIKVDPDD---KDTLRKIAKTSLTGK 157 (517)
T ss_pred HHHHhCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhhcccCCCC---HHHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999999999999999999999999986321 478999999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhcc------CCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeec
Q 009718 166 ILSQDKEHFGQLAVDAVMRLKG------STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTA 238 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~~------~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~ 238 (527)
+.+.+.+.|++++++|+.++++ .+++++|+|.+++||++++|++++|++|++++. ..||+.++||||++++++
T Consensus 158 ~~~~~~~~l~~l~~~A~~~v~~~~~~~~~~~~~~I~i~k~~Ggs~~ds~lv~G~v~~~~~~~~~m~~~~~n~~Illl~~~ 237 (517)
T cd03343 158 GAEAAKDKLADLVVDAVLQVAEKRDGKYVVDLDNIKIEKKTGGSVDDTELIRGIVIDKEVVHPGMPKRVENAKIALLDAP 237 (517)
T ss_pred chhhHHHHHHHHHHHHHHHhhhccCCCccccHHHeeEEeecCcCHHHcceeeeEEEeccCCCCCCccccCCCcEEEEecc
Confidence 9999999999999999998853 356778999999999999999999999999974 468999999999999999
Q ss_pred cccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHH
Q 009718 239 MDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERL 318 (527)
Q Consensus 239 Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~l 318 (527)
||+++++.. +++.+++.+++.++.+.|+++++++++.|++.++++|+++++|++.+++||.++||++++++++++|+||
T Consensus 238 Le~~k~~~~-~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~l~~~gI~~v~~v~~~~l~~I 316 (517)
T cd03343 238 LEVKKTEID-AKIRITSPDQLQAFLEQEEAMLKEMVDKIADTGANVVFCQKGIDDLAQHYLAKAGILAVRRVKKSDMEKL 316 (517)
T ss_pred ccCCccccc-eeEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHCCcEEEEeCCHHHHHHH
Confidence 999998875 7888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhC
Q 009718 319 ALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVND 398 (527)
Q Consensus 319 a~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~ 398 (527)
|++|||+++++++++++.++|+|+.|++.++|+++|++|++|++++.|||+|||||+.+++|++|+++||++++|+++++
T Consensus 317 a~~tGa~ii~~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~e~~~~l~Dal~~~~~~~~~ 396 (517)
T cd03343 317 ARATGAKIVTNIDDLTPEDLGEAELVEERKVGDDKMVFVEGCKNPKAVTILLRGGTEHVVDELERALEDALRVVADALED 396 (517)
T ss_pred HHHhCCEEecchhhCChhhCCccceEEEEEECCeEEEEEEcCCCCceEEEEEECCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred CccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCC
Q 009718 399 SRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG 478 (527)
Q Consensus 399 ~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g 478 (527)
+++|||||++|++++.+|++++...++++++++++|++||+.||++|++|||+|+.+++.+|++.|.+++.++|+|+.+|
T Consensus 397 ~~vvpGGG~~e~~ls~~L~~~~~~~~~~~~~~~~~~~~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~G~d~~~g 476 (517)
T cd03343 397 GKVVAGGGAVEIELAKRLREYARSVGGREQLAVEAFADALEEIPRTLAENAGLDPIDTLVELRAAHEKGNKNAGLDVYTG 476 (517)
T ss_pred CCeeeCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCceeeecCCC
Confidence 99999999999999999999988889999999999999999999999999999999999999999977777899999999
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhc
Q 009718 479 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITC 518 (527)
Q Consensus 479 ~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~ 518 (527)
++.||++.|||||+.+|+++|+.|+|+|++|||||++|+.
T Consensus 477 ~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~ 516 (517)
T cd03343 477 EVVDMLEKGVIEPLRVKKQAIKSATEAATMILRIDDVIAA 516 (517)
T ss_pred CccchhhcCceecHHHHHHHHHHHHHHHHHHHhhhHhhhC
Confidence 9999999999999999999999999999999999999975
No 11
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.8e-105 Score=858.02 Aligned_cols=510 Identities=38% Similarity=0.579 Sum_probs=485.5
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+++++++...|.+++..|+.||.+++++++|||||+|++|||++.. | ++|||||+||+++|+++||+++|++++|++
T Consensus 6 ~~~~~~~~~~~~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~--g-~~iTnDG~TIlk~i~~~hP~a~ll~~~a~~ 82 (522)
T TIGR02345 6 LLKEGTDTSQGKGQLISNINACVAIAEILKTTLGPRGMDKLIVGKN--G-ATVSNDGATILKLLDIVHPAAKTLVDIAKS 82 (522)
T ss_pred hhcCCcccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEEECCC--C-cEEeCcHHHHHHHhcccChHHHHHHHHHHH
Confidence 5688888999999999999999999999999999999999999986 8 999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
|++++||||||+|+|+++||+++.+|+++|+||+.|++||+.|.+.+++.|+++++|++..+....+.|.++++|+++||
T Consensus 83 q~~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~tsl~sK 162 (522)
T TIGR02345 83 QDSEVGDGTTSVVILAGELLKEAKPFIEEGVHPQLIIRCYREALMLAIEKLKEIAVTIDEVKGEQREVLEKCAATALNSK 162 (522)
T ss_pred HHHHhCCCchhHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCcccccHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999986421122468999999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhcc-CCCcccceeEEeCCCCCCCceeeeeEEEeccCCC----CCCccccCcceEEeeeccc
Q 009718 166 ILSQDKEHFGQLAVDAVMRLKG-STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI----GQPKRIENAKILVANTAMD 240 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~~-~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~----~~~~~~~n~~Ill~~~~Le 240 (527)
+.+.++++|++++++|+..+++ .+++++|+|+++.||+++||++++|++|++++.+ .||+.++||+|++++++|+
T Consensus 163 ~~~~~~~~l~~l~~~A~~~v~~~~~~~~~I~i~ki~Ggs~~ds~~v~Giv~~~~~~~~~~~~~~~~~~n~kIll~~~~Le 242 (522)
T TIGR02345 163 LIAHEKEFFSKMIVDAVLQLDIDDLDLKLIGVKKVQGGSLQDSVLVNGVAFKKTFSYAGFEQQPKKFANPKILLLNVELE 242 (522)
T ss_pred cccchHHHHHHHHHHHHHHHhhccCChhHheEEeecCCCHHhcceecceEEecccCccccccCCceeccceEEEEecCcc
Confidence 9999999999999999999975 5788899999999999999999999999998642 3689999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009718 241 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 320 (527)
Q Consensus 241 ~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~ 320 (527)
+.+.+.. ..+.+.+++++..+.+.|++.++++++.|++.|+++|+++++++|.+++||.+++|+++++++.++++++++
T Consensus 243 ~~~~~~~-~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~i~d~~~~~L~~~~I~~~~~v~~~dl~ria~ 321 (522)
T TIGR02345 243 LKAEKDN-AEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLPIGDLATQYFADHNIFCAGRVSDEDLKRVVK 321 (522)
T ss_pred cCccccc-eEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCccHHHHHHHHHCCcEEEecCCHHHHHHHHH
Confidence 9877763 678889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCc
Q 009718 321 VTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSR 400 (527)
Q Consensus 321 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~ 400 (527)
+|||+++++++++++.++|+|+.+++..+++++|++|+||+++++|||+|||+|+.+++|++|+++||++++|+++++++
T Consensus 322 ~tga~ii~~~~~l~~~~LG~~~~ie~~~~~~~r~~~~~g~~~~~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~ 401 (522)
T TIGR02345 322 ACGGSIQSTTSDLEADVLGTCALFEERQIGSERYNYFTGCPHAKTCTIILRGGAEQFIEEAERSLHDAIMIVRRALKARK 401 (522)
T ss_pred HhCCeEEcchhhCChhhccCCceEEEEEECCeEEEEEEcCCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred cccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcc
Q 009718 401 VLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSV 480 (527)
Q Consensus 401 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~ 480 (527)
+|||||++|++++.+|+++++..++++++++++|++||+.||++|++|||+|+.+++.+|+..|..++.++|||+.+|++
T Consensus 402 vvpGGG~~e~~ls~~l~~~~~~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~~~~~~G~d~~~~~i 481 (522)
T TIGR02345 402 IVAGGGAIEMELSKILREHSKKIDGKQQLIIEAFAKALEIIPRSLCENAGFDSIEILNKLRSRHAKGGKWYGVDINTEDI 481 (522)
T ss_pred EEeCCCHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCccceeCCCCcc
Confidence 99999999999999999998888999999999999999999999999999999999999999998777789999999999
Q ss_pred cccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcC
Q 009718 481 GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCA 519 (527)
Q Consensus 481 ~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~ 519 (527)
.||++.|||||+.||+++|+.|+|+|++|||||++|.++
T Consensus 482 ~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~ 520 (522)
T TIGR02345 482 GDNFENFVWEPLLVKKNALKAAFEAACTILSIDETIMNP 520 (522)
T ss_pred cchhhcCceEcHHHHHHHHHHHHHHHHHHHhHHHHHhCC
Confidence 999999999999999999999999999999999999873
No 12
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.6e-105 Score=860.17 Aligned_cols=502 Identities=39% Similarity=0.590 Sum_probs=475.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhcccCC
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGD 92 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 92 (527)
..+|++++..|++||..++++++|||||+||+|||+++. |+++|||||+||+++|+++||+++|++++|++|++++||
T Consensus 3 ~~~~~~~~~~ni~a~~~l~~~v~tslGP~G~~kmi~~~~--g~~~iTnDG~tIlk~i~~~hP~akll~~~a~~q~~~~GD 80 (527)
T cd03335 3 RTSGQDVRTQNVTAAMAIANIVKSSLGPVGLDKMLVDDI--GDVTITNDGATILKLLEVEHPAAKILVELAQLQDKEVGD 80 (527)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCC--CCEEEeCcHHHHHHhccccChHHHHHHHHHHHHHHHhCC
Confidence 567889999999999999999999999999999999997 999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhh-cccccCCchhhhHHHHHHHHHHhhcccccchhh
Q 009718 93 GTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQ-KVVDNKENAETFKSDLMKIAMTTLSSKILSQDK 171 (527)
Q Consensus 93 Gttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~~ 171 (527)
||||+++|+++||+++.+|+++|+||+.|++||+.|++.+++.|++ +++|++..+ ++.|.++++|+++||+.+.+.
T Consensus 81 GTTt~vvLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~---~~~l~~ia~tsl~sK~~~~~~ 157 (527)
T cd03335 81 GTTSVVIIAAELLKRANELVKQKIHPTTIISGYRLACKEAVKYIKEHLSISVDNLG---KESLINVAKTSMSSKIIGADS 157 (527)
T ss_pred CcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCccC---HHHHHHHHHHHhcccccchhH
Confidence 9999999999999999999999999999999999999999999996 888886321 467999999999999998888
Q ss_pred hHHHHHHHHHHHhhc---c----CCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeecccccc
Q 009718 172 EHFGQLAVDAVMRLK---G----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDK 243 (527)
Q Consensus 172 ~~l~~li~~a~~~~~---~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~Le~~~ 243 (527)
+.|++++++|+..++ . .+++++|+|++++||++++|++++|++|++++. ..||+.++||||++++++|++++
T Consensus 158 ~~ls~l~~~A~~~v~~~~~~~~~~~~~~~I~i~~~~Ggs~~~s~li~Givi~~~~~~~~m~~~i~n~kIlll~~~Le~~~ 237 (527)
T cd03335 158 DFFANMVVDAILAVKTTNEKGKTKYPIKAVNILKAHGKSAKESYLVNGYALNCTRASQGMPTRVKNAKIACLDFNLQKTK 237 (527)
T ss_pred HHHHHHHHHHHHHhhcccccCCCccCHHHeEEEEecCcChhhcceeeeEEEecccCCCCCcccccCCcEEEEeccCCCCc
Confidence 999999999999984 1 267789999999999999999999999999875 46899999999999999999988
Q ss_pred ccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhC
Q 009718 244 VKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTG 323 (527)
Q Consensus 244 ~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tG 323 (527)
.+.. .++.++++++++.+.+.|+++++++++.|++.|+++|+++++|+|.+++||.++||++++|+++++|+|||++||
T Consensus 238 ~~~~-~~~~~~~~~~le~~~~~E~~~l~~~i~~i~~~g~~lvi~~k~I~d~al~~L~~~~I~~v~~v~~~~lerIa~~tG 316 (527)
T cd03335 238 MKLG-VQVVVTDPEKLEKIRQRESDITKERIKKILAAGANVVLTTGGIDDMCLKYFVEAGAMAVRRVKKEDLRRIAKATG 316 (527)
T ss_pred cccc-eeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHCCcEEEEeCCHHHHHHHHHHhC
Confidence 7764 778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCC------CCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhh
Q 009718 324 GEIASTFDNP------ESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVN 397 (527)
Q Consensus 324 a~ii~~~~~l------~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~ 397 (527)
|+++++++++ ++.++|+|++|++.++++++|++|++|+++++|||+|||+|+.+++|++|+++||+++++++++
T Consensus 317 a~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~g~~~~~~~TIllrG~t~~~l~e~er~i~Dal~~~~~~~~ 396 (527)
T cd03335 317 ATLVSTLANLEGEETFDPSYLGEAEEVVQERIGDDELILIKGTKKRSSASIILRGANDFMLDEMERSLHDALCVVKRTLE 396 (527)
T ss_pred CEEecChhhcCcccccCHhhCccCceEEEEEECCeEEEEEEcCCCCCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999998655 3347999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcC--------CC
Q 009718 398 DSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE--------GC 469 (527)
Q Consensus 398 ~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~--------~~ 469 (527)
++++|||||++|++|+.+|+++++..++++++++++||+||+.||++||+|||+|+.+++.+|++.|.++ ++
T Consensus 397 ~~~vvpGGGa~e~~ls~~L~~~~~~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~~~~~l~~~h~~~~~~~~~~~~~ 476 (527)
T cd03335 397 SNSVVPGGGAVETALSIYLENFATTLGSREQLAIAEFAEALLVIPKTLAVNAAKDATELVAKLRAYHAAAQVKPDKKHLK 476 (527)
T ss_pred CCCEeeCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCccccccCc
Confidence 9999999999999999999999998999999999999999999999999999999999999999999876 45
Q ss_pred cceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCC
Q 009718 470 PAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAP 520 (527)
Q Consensus 470 ~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~ 520 (527)
++|+|+.+|+++||++.|||||+.+|.++|+.|+|+|++|||||++|.+.|
T Consensus 477 ~~Gid~~~g~~~d~~~~gV~dp~~~k~~~i~~A~e~a~~iLrID~ii~~~~ 527 (527)
T cd03335 477 WYGLDLINGKVRDNLEAGVLEPTVSKIKSLKFATEAAITILRIDDLIKLNP 527 (527)
T ss_pred eEeEECCCCcccchhhccceecHHHHHHHHHHHHHHHHHHHhhcceeecCC
Confidence 799999999999999999999999999999999999999999999998865
No 13
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.9e-105 Score=856.95 Aligned_cols=500 Identities=37% Similarity=0.570 Sum_probs=478.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhcccCCC
Q 009718 14 EKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDG 93 (527)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDG 93 (527)
..+.+++.+|+.||..++++++|||||+|++|||+++. |+++|||||+|||++|+++||+++|++++|++|++++|||
T Consensus 5 ~~~~~~~~~ni~a~~~ia~~~kttlGP~G~~kmi~~~~--g~~~ITnDG~tIlk~i~~~hP~akll~~~a~~qd~~~GDG 82 (517)
T TIGR02342 5 DKPTDVRTSNIVAAKAVADAIRTSLGPRGMDKMIQSGN--GEVIITNDGATILKQMGVIHPAAKMLVELSKAQDIEAGDG 82 (517)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEEcCC--CCEEEeCCHHHHHHhccccChHHHHHHHHHHHHHHHhCCC
Confidence 56678889999999999999999999999999999997 9999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccchhhhH
Q 009718 94 TTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEH 173 (527)
Q Consensus 94 ttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~~~~ 173 (527)
|||+++|+++||+++.+|+++|+||+.|++||+.|.+.+++.|+++++|++..+ .+.|.++++|+++||+.+.+.++
T Consensus 83 Ttt~viLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~---~~~l~~va~tsl~sK~~~~~~~~ 159 (517)
T TIGR02342 83 TTSVVILAGALLGACETLLERGIHPTTISESFQIAADEAIKILDEMSIPVDLSD---REILIKSATTSLSSKVVSQYSSL 159 (517)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCccC---HHHHHHHHHHHhccccchhHHHH
Confidence 999999999999999999999999999999999999999999999999876422 46899999999999999999999
Q ss_pred HHHHHHHHHHhhcc-----CCCcccceeEEeCCCCCCCceeeeeEEEeccCCC--CCCccccCcceEEeeeccccccccc
Q 009718 174 FGQLAVDAVMRLKG-----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI--GQPKRIENAKILVANTAMDTDKVKI 246 (527)
Q Consensus 174 l~~li~~a~~~~~~-----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~--~~~~~~~n~~Ill~~~~Le~~~~~~ 246 (527)
|++++++|+..+++ .+++++|+|+++.||++++|++++|++|++++.+ .||++++||||++++++|+.++++.
T Consensus 160 ls~l~~~a~~~v~~~~~~~~~~~~~i~i~k~~Ggs~~ds~li~Givl~k~~~~~~~mpk~i~n~kI~ll~~~Le~~~~~~ 239 (517)
T TIGR02342 160 LAPLAVDAVLKVIDPENDKNVDLNDIKVVKKLGGTIDDTELIEGLVFTQKASRSAGGPTRIEKAKIGLIQFQISPPKTDM 239 (517)
T ss_pred HHHHHHHHHHHHhccccCCccCHHHeeEEeccCCChhhcEEEeeEEEeccccccCCCCccccCCcEEEEecCCCCCcccc
Confidence 99999999999864 4678899999999999999999999999999865 7899999999999999999988776
Q ss_pred cCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccC-----CchHHHHHHHcCCeEEecCChhhHHHHHHH
Q 009718 247 YGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLI-----YNFPEELFADAGILAIEHADFDGIERLALV 321 (527)
Q Consensus 247 ~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I-----~~~~~~~l~~~~I~~i~~v~~~~L~~la~~ 321 (527)
. .++.+.++++++.+.+.|+++++.++++|.+.|+++|+++++| ++.+++||.++||++++++++++|+|||++
T Consensus 240 ~-~~~~~~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~lvi~~~~I~~~~l~~l~~~~l~~~~I~av~~v~~~~LerIa~~ 318 (517)
T TIGR02342 240 E-NQVIVNDYAQMDRVLKEERKYILNIVKKIKKTGCNVLLIQKSILRDAVNDLALHFLAKMKIMVVKDIEREEVEFICKT 318 (517)
T ss_pred c-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHhhCCceEEecCCHHHHHHHHHH
Confidence 4 6788899999999999999999999999999999999999998 899999999999999999999999999999
Q ss_pred hCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCC-CceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCc
Q 009718 322 TGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEM-GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSR 400 (527)
Q Consensus 322 tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~-~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~ 400 (527)
|||+++++++++++.++|+|+.|+++.+++++|+++++|++ ++.+||+|||||+.+++|++|+++||++++++++++++
T Consensus 319 tGa~ii~~~~~l~~~~LG~~~~v~~~~~~~~~~~~i~~~~~~~~~~tIllrG~t~~~l~E~er~i~DAl~~v~~~~~~~~ 398 (517)
T TIGR02342 319 IGCKPIASIDHFTADKLGSAELVEEVTTDGGKIIKITGIQNAGKTVTVLLRGSNKLVIDEAERSLHDALCVIRSLVKKRG 398 (517)
T ss_pred HCCEEEcchhhcCcccCcCCceEEEEEECCeEEEEEEccCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999999999999999999999999987 48999999999999999999999999999999999999
Q ss_pred cccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcc
Q 009718 401 VLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSV 480 (527)
Q Consensus 401 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~ 480 (527)
+|||||++|+++|.+|+++++..++++|+++++||+||+.||++|++|||+|+.+++++|+..|.+++.++|+|+.+|++
T Consensus 399 ~VpGGGa~e~~ls~~l~~~~~~~~~~~~~~i~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~i 478 (517)
T TIGR02342 399 LIPGGGAPEIEIAIKLSKLARTMKGVESYCVRAFADALEVIPYTLAENAGLNPIDVVTELRNRHANGEKYAGISVRKGGI 478 (517)
T ss_pred EEECcCHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCccceecCCCCc
Confidence 99999999999999999998888999999999999999999999999999999999999999998888889999999999
Q ss_pred cccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcC
Q 009718 481 GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCA 519 (527)
Q Consensus 481 ~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~ 519 (527)
+||++.|||||+.+|+++|+.|+|+|++|||||++|.++
T Consensus 479 ~d~~~~gI~dp~~vk~~ai~~A~e~a~~iL~iD~ii~~~ 517 (517)
T TIGR02342 479 TDMLEEEVLQPLLVTTSAVTLASETVRMILKIDDIVFTR 517 (517)
T ss_pred cchhhccceEcHHHHHHHHHHHHHHHHHHhcccceeecC
Confidence 999999999999999999999999999999999999764
No 14
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT epsilon chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=2.6e-105 Score=856.89 Aligned_cols=509 Identities=36% Similarity=0.572 Sum_probs=482.2
Q ss_pred cccc--hhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHH
Q 009718 6 IFRD--EANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDIS 83 (527)
Q Consensus 6 ~~~~--~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~ 83 (527)
++++ +.+..+|.+++..|+.||..++++++|||||+||+|||+++. |+++|||||+||+++|+++||+++|++++|
T Consensus 13 ~~~~~~~~~~~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~--G~~~ITnDG~tIlk~l~~~hP~akll~~~a 90 (532)
T TIGR02343 13 IIKDQDKKKRLKGLEAIKSNIAAAKSVASILRTSLGPKGMDKMLQSPD--GDITVTNDGATILSQMDVDNPIAKLMVELS 90 (532)
T ss_pred hhccccccccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCC--CCEEEeCcHHHHHHHccCCCHHHHHHHHHH
Confidence 4566 467889999999999999999999999999999999999997 999999999999999999999999999999
Q ss_pred hhhhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhc
Q 009718 84 KVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLS 163 (527)
Q Consensus 84 ~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~ 163 (527)
++|++++||||||+++|+++||+++.+|+++|+||+.|++||+.|++.+++.|+++++|+..+. ..++.|.++++|+++
T Consensus 91 ~~qd~~~GDGTttvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~-~~~~~l~~ia~t~l~ 169 (532)
T TIGR02343 91 KSQDDEIGDGTTGVVVLAGALLEQAEALLDKGIHPIKIAEGFEVAARVAVEHLEEISEEISDDN-NNKEPLIQAAKTSLG 169 (532)
T ss_pred HHHHHHhcCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcCC-CCHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999875321 124679999999999
Q ss_pred ccccchhhhHHHHHHHHHHHhhcc----CCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeec
Q 009718 164 SKILSQDKEHFGQLAVDAVMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTA 238 (527)
Q Consensus 164 sK~~~~~~~~l~~li~~a~~~~~~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~ 238 (527)
+|+.+.+.+.|++++++|+..+.. ++++++|+|++++||+++||++++|++|++++. ..||+.++||||++++++
T Consensus 170 sK~~~~~~~~ls~i~~~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~ds~~v~Gi~i~~~~~~~~m~~~~~n~kI~l~~~~ 249 (532)
T TIGR02343 170 SKIVSKCHRRFAEIAVDAVLMVADMERRDVDFDLIKVEGKVGGSLEDTKLIKGIIIDKDFSHPQMPKEVKDAKIAILTCP 249 (532)
T ss_pred cchhhHHHHHHHHHHHHHHHhhhhcCCCcCCHHHeeEEEecCCCcccceeEeeEEEecCcCCCCCCeeecCCcEEEEEee
Confidence 999988999999999999998842 568889999999999999999999999999875 468999999999999999
Q ss_pred cccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHH
Q 009718 239 MDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERL 318 (527)
Q Consensus 239 Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~l 318 (527)
||+++++.. .++.+++++++..+.+.|+++++.+++.|.+.|+++|+++++|+|.+++||.++||.+++++++++|+||
T Consensus 250 le~~~~~~~-~~~~i~~~~~~~~~~~~E~~~l~~~l~~i~~~g~~lvi~~~~I~~~al~~L~~~~i~~v~~~~~~~l~~I 328 (532)
T TIGR02343 250 FEPPKPKTK-HKLDISSVEEYKKLQKYEQQKFAEMIDDIKKSGANIVICQWGFDDEANHLLLQNDLPAVRWVGGHELELI 328 (532)
T ss_pred ccccccccc-eeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCccHHHHHHHHHCCcEEEEcCCHHHHHHH
Confidence 999998754 6788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCccccccCCCCCCCCcccceEEEEEEcC--eEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHh
Q 009718 319 ALVTGGEIASTFDNPESVKLGHCKLIEEIMIGE--DKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTV 396 (527)
Q Consensus 319 a~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~--~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~ 396 (527)
|++|||+++++++++++.++|+|+.|++..+|+ ++|++|++|++++.+||+|||+|+.+++|+||+++||++++|+++
T Consensus 329 a~~tGa~~i~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~i~~~~~~~~~TIllrG~t~~~l~E~er~l~DAl~~v~~~i 408 (532)
T TIGR02343 329 AIATGGRIVPRFEELSEDKLGKAGLVREISFGTTKDRMLVIEQCKNSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLI 408 (532)
T ss_pred HHHhCCEEecccccCCHhHCcccceEEEEEecCCcceEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999987 489999999988999999999999999999999999999999999
Q ss_pred hCCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcC-CCcceEEc
Q 009718 397 NDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE-GCPAGIDV 475 (527)
Q Consensus 397 ~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~-~~~~Gid~ 475 (527)
+++++|||||++|++|+++|++++...++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..+ +.++|+|+
T Consensus 409 ~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~~~i~~fa~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~ 488 (532)
T TIGR02343 409 KNSRIVYGGGAAEISCSLAVSQEADKYSGVEQYAIRAFADALEEIPMALAENSGLDPIGTLSDLKSLQMKEKNPHLGVDC 488 (532)
T ss_pred hCCCEEeCcCHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCccCeeC
Confidence 99999999999999999999999888899999999999999999999999999999999999999998754 56799999
Q ss_pred cCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhc
Q 009718 476 ISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITC 518 (527)
Q Consensus 476 ~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~ 518 (527)
.+|.+.||++.|||||+.||+++|+.|+|+|++|||||++|.+
T Consensus 489 ~~g~i~d~~~~gV~Dp~~vk~~al~~A~e~a~~iL~id~ii~~ 531 (532)
T TIGR02343 489 LGDGTNDMKEQGVFETLIGKKQQIQLATQLVRMILKIDDVISP 531 (532)
T ss_pred CCCccccchhccCeecHHHHHHHHHHHHHHHHHHHhHhhhccC
Confidence 9999999999999999999999999999999999999999964
No 15
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=4.3e-105 Score=856.68 Aligned_cols=508 Identities=37% Similarity=0.583 Sum_probs=480.1
Q ss_pred cccch--hhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHH
Q 009718 6 IFRDE--ANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDIS 83 (527)
Q Consensus 6 ~~~~~--~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~ 83 (527)
+++++ .+...|++++..|+.||..++++++|||||+||+|||+++. |+++|||||+||+++|+++||+++|+++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~ni~~~~~i~~~v~tslGP~G~~kmi~~~~--G~~~iTnDG~tIlk~l~~~hP~akll~~~a 86 (526)
T cd03339 9 IVREQEKKKRLKGLEAHKSHILAAKSVANILRTSLGPRGMDKILVSPD--GEVTVTNDGATILEKMDVDHQIAKLLVELS 86 (526)
T ss_pred EecCCCccccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEECCC--CCEEEeCcHHHHHHHhcccCHHHHHHHHHH
Confidence 45776 36889999999999999999999999999999999999997 999999999999999999999999999999
Q ss_pred hhhhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhc
Q 009718 84 KVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLS 163 (527)
Q Consensus 84 ~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~ 163 (527)
++|++++||||||+++|+++||+++.+|+++|+||+.|++||+.|++.+++.|+++++|++.+. ...+.|.++++|+++
T Consensus 87 ~~q~~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~-~~~~~l~~ia~tsl~ 165 (526)
T cd03339 87 KSQDDEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIADGYEQACKIAVEHLEEIADKIEFSP-DNKEPLIQTAMTSLG 165 (526)
T ss_pred HhhhhhhcCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCc-ccHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999876421 125689999999999
Q ss_pred ccccchhhhHHHHHHHHHHHhhcc----CCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeec
Q 009718 164 SKILSQDKEHFGQLAVDAVMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTA 238 (527)
Q Consensus 164 sK~~~~~~~~l~~li~~a~~~~~~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~ 238 (527)
||+.+.+.+.|++++++|+..+.. +.+++.|+|.+++||+++||++++|++|++++. ..||+.++||||++++++
T Consensus 166 sk~~~~~~~~~s~i~v~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~dS~~v~Givi~~~~~~~~m~~~~~n~kI~ll~~~ 245 (526)
T cd03339 166 SKIVSRCHRQFAEIAVDAVLSVADLERKDVNFELIKVEGKVGGRLEDTKLVKGIVIDKDFSHPQMPKEVKDAKIAILTCP 245 (526)
T ss_pred ccchhhHHHHHHHHHHHHHHHHhhcCCCccchHHeEEEEecCcCHHHcceeeeEEEecccCCCCCCceecCCCEEEEEec
Confidence 999988999999999999998742 456789999999999999999999999999975 468999999999999999
Q ss_pred cccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHH
Q 009718 239 MDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERL 318 (527)
Q Consensus 239 Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~l 318 (527)
||+++++.. .++.+++++++..+.+.|+++++.++++|.+.++++|+++++|+|.+++||.++||++++++++++|+||
T Consensus 246 le~~~~~~~-~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~~~~LerI 324 (526)
T cd03339 246 FEPPKPKTK-HKLDITSVEDYKKLQEYEQKYFREMVEQVKDAGANLVICQWGFDDEANHLLLQNGLPAVRWVGGVEIELI 324 (526)
T ss_pred ccCCccccc-eEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEeCCCCCHHHHHHHHHCCCEEEEeCCHHHHHHH
Confidence 999988654 6788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCccccccCCCCCCCCcccceEEEEEEcC--eEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHh
Q 009718 319 ALVTGGEIASTFDNPESVKLGHCKLIEEIMIGE--DKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTV 396 (527)
Q Consensus 319 a~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~--~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~ 396 (527)
|++|||+++++++++++.++|+|+.|++..+|. ++|++|++|++++.+||+|||+|+.+++|+||+++||++++|+++
T Consensus 325 a~~tGa~ii~~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~l~DAl~~~~~~~ 404 (526)
T cd03339 325 AIATGGRIVPRFEDLSPEKLGKAGLVREISFGTTKDKMLVIEGCPNSKAVTIFIRGGNKMIIEEAKRSLHDALCVVRNLI 404 (526)
T ss_pred HHHhCCEEecchhhCChhhcccCceEEEEEecCCCcEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999985 789999999999999999999999999999999999999999999
Q ss_pred hCCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcC-CCcceEEc
Q 009718 397 NDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE-GCPAGIDV 475 (527)
Q Consensus 397 ~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~-~~~~Gid~ 475 (527)
+++++|||||++|++++.+|+++++..++++++++++||+||+.||++|++|||+|+.+++.+|+..|.++ +.++|+|+
T Consensus 405 ~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~ 484 (526)
T cd03339 405 RDNRIVYGGGAAEISCSLAVEKAADKCSGIEQYAMRAFADALESIPLALAENSGLNPIETLSEVKARQVKEKNPHLGIDC 484 (526)
T ss_pred hCCCEEeCCCHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCeEeeec
Confidence 99999999999999999999999888899999999999999999999999999999999999999999643 56799999
Q ss_pred cCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhh
Q 009718 476 ISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIIT 517 (527)
Q Consensus 476 ~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~ 517 (527)
.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|.
T Consensus 485 ~~g~~~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~iD~ii~ 526 (526)
T cd03339 485 LGRGTNDMKEQKVFETLISKKQQILLATQVVKMILKIDDVIV 526 (526)
T ss_pred CCCccCchhhcCceecHHHHHHHHHHHHHHHHHHhhhceecC
Confidence 999999999999999999999999999999999999999873
No 16
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.4e-104 Score=851.18 Aligned_cols=515 Identities=30% Similarity=0.476 Sum_probs=485.1
Q ss_pred cccchhhhhhhH-HHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHh
Q 009718 6 IFRDEANEEKGE-RARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISK 84 (527)
Q Consensus 6 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~ 84 (527)
+++++++...|. +++.+|+.||..++++|+|||||+|++|||+++. |+++|||||+||+++|+++||+++|++++|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~--g~~~ITnDG~tIlk~i~~~hP~akll~e~a~ 82 (531)
T TIGR02346 5 LLKEGYRHMSGLEEAVIKNIEACKELSNITRTSLGPNGMNKMVINHL--DKLFVTNDAATILRELEVQHPAAKLLVMASE 82 (531)
T ss_pred cccCCcccccchHHHHHHHHHHHHHHHHHHhcccCCCcCCeEEEcCC--CCEEEECcHHHHHHhccccCHHHHHHHHHHH
Confidence 567776677775 5999999999999999999999999999999997 9999999999999999999999999999999
Q ss_pred hhhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhccc-ccCCchhhhHHHHHHHHHHhhc
Q 009718 85 VQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVV-DNKENAETFKSDLMKIAMTTLS 163 (527)
Q Consensus 85 ~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~-~~~~~~~~~~~~l~~i~~t~l~ 163 (527)
+|++++||||||+|+|+++||+++.+++++|+||+.|++||+.|++.+++.|+++++ ++.... ..+.|.++++|+++
T Consensus 83 sqd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~--~~~~l~~i~~tsl~ 160 (531)
T TIGR02346 83 MQENEIGDGTNLVIVLAGELLDKAEELIRMGLHPSEIIKGYEQALKKAMEVLEELVVWEVEDVR--NKKELIKALKASIS 160 (531)
T ss_pred HHhhhhCCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCC--CHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999986 654311 14679999999999
Q ss_pred ccccchhhhHHHHHHHHHHHhhcc----CCCcccceeEEeCCCCCCCceeeeeEEEeccCCCCCCccccCcceEEeeecc
Q 009718 164 SKILSQDKEHFGQLAVDAVMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAM 239 (527)
Q Consensus 164 sK~~~~~~~~l~~li~~a~~~~~~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~Ill~~~~L 239 (527)
||+.+. +++|++++++|+.++++ .++++.|+|+++.|+++++|++++|++|++++ ..+|+.++||||+++++|+
T Consensus 161 sK~~~~-~~~ls~l~~~Ai~~v~~~~~~~~~~~~I~i~ki~G~s~~ds~li~Gi~~~~~~-~~~~k~i~n~kI~l~~~~l 238 (531)
T TIGR02346 161 SKQYGN-EDFLAQLVAKACSTVMPKNPENFNVDNIRVSKIMGGSISNSEVLKGMVFNREA-EGSVKRVKNAKVAVFSCPL 238 (531)
T ss_pred cccCch-HHHHHHHHHHHHHHHhhcCCCcCChhHeeEEEecCCChhhceeEeeeEEeccC-CCCceeccCCCEEEEecCc
Confidence 999887 99999999999999864 45778999999999999999999999999995 4679999999999999999
Q ss_pred ccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHH
Q 009718 240 DTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLA 319 (527)
Q Consensus 240 e~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la 319 (527)
+.++++.. .++.+++++++..+.+.|++.++.+++.|++.|+++|+++++|+|.+++||.++||+|++++++.+|+|||
T Consensus 239 ~~~~~~~~-~~~~~~~~~~l~~~~~~e~~~i~~~l~~i~~~g~~lvi~~~~I~d~~~~~l~~~~I~av~~~~~~~l~~Ia 317 (531)
T TIGR02346 239 DTATTETK-GTVLIHNAEELLNYSKGEENQIEAYIKAIADSGVNVIVTGGSVGDMALHYCEKYNIMVLKIPSKFELRRLC 317 (531)
T ss_pred CCCcccCc-eEEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCCcCHHHHHHHHHCCcEEEecCCHHHHHHHH
Confidence 99988764 67899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCC-CCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhC
Q 009718 320 LVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVE-MGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVND 398 (527)
Q Consensus 320 ~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~-~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~ 398 (527)
.+|||+++++++++++.++|+|+.|++..+|+++|.+|+++. .++++||+|||||+.+++|++|+++||++++|+++++
T Consensus 318 ~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~~~~~~~~~~tI~lrG~t~~~l~E~er~i~DAl~~~k~ai~~ 397 (531)
T TIGR02346 318 KTVGATPLARLGAPQPEEIGYVDSVYVSEIGGQKVTVFKQENGDSKISTIILRGSTKNLLDDIERAIDDGVNVIKALVKD 397 (531)
T ss_pred HHHCCEEecccccCCHhHccccceEEEEEECCEEEEEEEccCCCCCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999887 4789999999999999999999999999999999999
Q ss_pred CccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCC
Q 009718 399 SRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG 478 (527)
Q Consensus 399 ~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g 478 (527)
+++||||||+|+++|.+|+++++..++++++++++|++||+.||++|++|||+|+.+++.+|+..|.+++.++|||+.+|
T Consensus 398 ~~vVpGGG~~e~~ls~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~Gid~~~~ 477 (531)
T TIGR02346 398 NRFLPGAGATEIELALRLKKYANKLPGLDQYAIKKFAEAFEIIPRTLAENAGLNPNEVIPKLYAAHKKGNTSSGIDIEAE 477 (531)
T ss_pred CCEEECcCHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCccceeeeCC
Confidence 99999999999999999999988889999999999999999999999999999999999999999987777899999999
Q ss_pred c--ccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCCCCC
Q 009718 479 S--VGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRREDRM 527 (527)
Q Consensus 479 ~--~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~~~~ 527 (527)
. +.||++.|||||+.||+++|+.|+|+|++|||||++|...|...+++|
T Consensus 478 ~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~~~~~~~~~~ 528 (531)
T TIGR02346 478 SDGVKDASEAGIYDNLATKKWAIKLATEAAVTVLRVDQIIMAKPAGGPKPP 528 (531)
T ss_pred CccccChhhcCceEcHHHHHHHHHHHHHHHHHHhhhhHhhccCCCCCCCCC
Confidence 9 599999999999999999999999999999999999999987777654
No 17
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=7.4e-104 Score=848.11 Aligned_cols=506 Identities=37% Similarity=0.582 Sum_probs=477.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhcccC
Q 009718 12 NEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVG 91 (527)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~G 91 (527)
+..+|++++..|++||..|+++++|||||+|++|||+++. |+++|||||+||+++|+++||+++|++++|++|++++|
T Consensus 6 ~~~~~~~~~~~ni~~~~~l~~~vkttlGP~G~~k~I~~~~--g~~~iTnDG~tIlk~i~~~hP~akll~~~a~~qd~~~G 83 (536)
T TIGR02340 6 ERTSGQDVRTQNVTAAMAIANIVKTSLGPVGLDKMLVDDI--GDVTITNDGATILKLLEVEHPAAKILVELAQLQDREVG 83 (536)
T ss_pred ceecHHHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCC--CCEEEeccHHHHHHHhcccChHHHHHHHHHHHHHHHhC
Confidence 4778899999999999999999999999999999999997 99999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhc-ccccCCchhhhHHHHHHHHHHhhcccccchh
Q 009718 92 DGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQK-VVDNKENAETFKSDLMKIAMTTLSSKILSQD 170 (527)
Q Consensus 92 DGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~-s~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~ 170 (527)
|||||+++|+++||+++.+|+++|+||+.|++||+.|.+.+++.|++. ++|++... .+.|+++++|+++||+.+.+
T Consensus 84 DGTTt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~---~~~l~~va~tsl~sK~~~~~ 160 (536)
T TIGR02340 84 DGTTSVVIIAAELLKRADELIKRKVHPTSIISGYRLACKEAVKYIKENLSVSVDELG---REALINVAKTSMSSKIIGLD 160 (536)
T ss_pred CChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCccc---HHHHHHHHHHHhccccchhh
Confidence 999999999999999999999999999999999999999999999874 88876321 46799999999999999999
Q ss_pred hhHHHHHHHHHHHhhc---c----CCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeeccccc
Q 009718 171 KEHFGQLAVDAVMRLK---G----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTD 242 (527)
Q Consensus 171 ~~~l~~li~~a~~~~~---~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~Le~~ 242 (527)
++.|++++++|+..++ . .+++++|+|+++.||++++|++++|++|++++. ..||+.++||+|++++++|++.
T Consensus 161 ~~~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~G~s~~~s~~i~Gi~i~~~~~~~~m~~~~~n~kIli~~~~L~~~ 240 (536)
T TIGR02340 161 SDFFSNIVVDAVLAVKMTNENGETKYPIKAVNILKAHGGSARESYLVKGYALNCTRASQQMPKRIKKAKIACLDFNLQKQ 240 (536)
T ss_pred HHHHHHHHHHHHHHHhcccccCccccchHHeEEEEecCCCccccEEEEEEEEecccCCCCCcceecCCcEEEEecCCCCC
Confidence 9999999999999985 1 257789999999999999999999999999874 4689999999999999999998
Q ss_pred cccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHh
Q 009718 243 KVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 322 (527)
Q Consensus 243 ~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~t 322 (527)
+.+.. .++.++++.+++.+.+.|++++.++++.|++.++++|+++++|+|.+++||.+++|++++|+++++|+|||++|
T Consensus 241 ~~~~~-~~~~~~~~~~le~~~~~E~~~i~~~i~~I~~~g~~lvi~~k~I~~~a~~~L~k~~I~~i~rv~~~~LerIa~~t 319 (536)
T TIGR02340 241 KMALG-VQIVVDDPAKLEGIRQREADITKERIKKILKAGANVVLTTGGIDDMCLKYFVEAGAMGVRRCKKEDLKRIAKAT 319 (536)
T ss_pred cccCc-eeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHCCcEEEecCCHHHHHHHHHHh
Confidence 87764 78899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCC------CCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHh
Q 009718 323 GGEIASTFDNP------ESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTV 396 (527)
Q Consensus 323 Ga~ii~~~~~l------~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~ 396 (527)
||++++++.++ ++.++|+|+.|+++.+++++|++|++++.+++|||+|||+|+.+++|++|+++||++++|+++
T Consensus 320 Ga~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~TIlirG~t~~~l~E~~r~i~DAl~~~~~~~ 399 (536)
T TIGR02340 320 GGTLVSTLADLEGEETFDASYLGFADEVVEERIADDECILIKGTKGRKSASIILRGANDFMLDEMERSLHDALCVVKRTL 399 (536)
T ss_pred CCEEecchhhcCccccccccccccCceEEEEEECCeEEEEEEcCCCCCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999987554 344599999999999999999999999888899999999999999999999999999999999
Q ss_pred hCCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcC--------C
Q 009718 397 NDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE--------G 468 (527)
Q Consensus 397 ~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~--------~ 468 (527)
+++++|||||++|++++.+|+++++..++++++++++|++||+.||++|++|||+|+.+++.+|+..|.++ +
T Consensus 400 ~~~~vVpGGGa~e~~ls~~l~~~~~~~~~~~~~~~~~fa~AL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~~~~~ 479 (536)
T TIGR02340 400 ESNSVVPGGGAVETALSIYLENFATTLGSREQLAIAEFAEALLIIPKVLAVNAALDSTELVAKLRAYHAAAQLKPEKKHL 479 (536)
T ss_pred cCCCEEECCCHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCcccccccC
Confidence 99999999999999999999998888899999999999999999999999999999999999999999765 3
Q ss_pred CcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCC
Q 009718 469 CPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRR 523 (527)
Q Consensus 469 ~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~ 523 (527)
.++|||+.+|++.||++.|||||+.+|.++|+.|+|+|++|||||++|...|+++
T Consensus 480 ~~~Gid~~~g~~~d~~~~gI~Dp~~~k~~~l~~A~e~a~~iL~ID~ii~~~~~~~ 534 (536)
T TIGR02340 480 KWYGLDLSNGKIRDNKEAGVLEPAVSKVKSLKFATEAAITILRIDDLIKLNPEQS 534 (536)
T ss_pred ceEeEEccCCccccchhccceecHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCC
Confidence 4689999999999999999999999999999999999999999999999988554
No 18
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=6e-104 Score=847.19 Aligned_cols=501 Identities=36% Similarity=0.575 Sum_probs=477.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhcccC
Q 009718 12 NEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVG 91 (527)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~G 91 (527)
+...+.+++.+|+.||..++++++|||||+||+|||+++. |+++|||||+||+++|+++||+++|+++++++|++++|
T Consensus 2 ~~~~~~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~--g~~~iTnDG~tIlk~l~~~hp~a~ll~~~a~~q~~~~G 79 (515)
T cd03338 2 DKEKPADVRLSNIQAAKAVADAIRTSLGPRGMDKMIQTGK--GEVIITNDGATILKQMSVLHPAAKMLVELSKAQDIEAG 79 (515)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeeCCC--CCEEEECcHHHHHHhCcCcCHHHHHHHHHHHHHHhHhc
Confidence 4567888999999999999999999999999999999997 99999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccchhh
Q 009718 92 DGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDK 171 (527)
Q Consensus 92 DGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~~ 171 (527)
|||||+++|+++|++++.+++++|+||..|++||+.|.+.+++.|+++++|++..+ .+.|.++++|+++||+.+.++
T Consensus 80 DGTtt~vvLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~a~~v~~~~---~~~l~~va~ts~~sK~~~~~~ 156 (515)
T cd03338 80 DGTTSVVVLAGALLSACESLLKKGIHPTVISESFQIAAKKAVEILDSMSIPVDLND---RESLIKSATTSLNSKVVSQYS 156 (515)
T ss_pred CCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCC---HHHHHHHHHHHhccccchhhH
Confidence 99999999999999999999999999999999999999999999999999886322 467999999999999999999
Q ss_pred hHHHHHHHHHHHhhcc-----CCCcccceeEEeCCCCCCCceeeeeEEEeccCCCC--CCccccCcceEEeeeccccccc
Q 009718 172 EHFGQLAVDAVMRLKG-----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIG--QPKRIENAKILVANTAMDTDKV 244 (527)
Q Consensus 172 ~~l~~li~~a~~~~~~-----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~--~~~~~~n~~Ill~~~~Le~~~~ 244 (527)
++|++++++|+.++++ .+++++|+|+++.|+++++|++++|++|++++.+. +|++++|||+++++|+|+++++
T Consensus 157 ~~ls~li~~A~~~v~~~~~~~~~d~~~i~i~~~~Ggs~~ds~lv~Giv~~k~~~~~~~~p~~i~n~ki~ll~~~le~~~~ 236 (515)
T cd03338 157 SLLAPIAVDAVLKVIDPATATNVDLKDIRIVKKLGGTIEDTELVDGLVFTQKASKKAGGPTRIEKAKIGLIQFCLSPPKT 236 (515)
T ss_pred HHHHHHHHHHHHHhhcccccCcCCHHHeEEEEecCCChhhceeeeeEEEeccccCcCCCCccccCCcEEEEecccccccc
Confidence 9999999999999964 35788999999999999999999999999998653 5999999999999999999888
Q ss_pred cccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccC-----CchHHHHHHHcCCeEEecCChhhHHHHH
Q 009718 245 KIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLI-----YNFPEELFADAGILAIEHADFDGIERLA 319 (527)
Q Consensus 245 ~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I-----~~~~~~~l~~~~I~~i~~v~~~~L~~la 319 (527)
+.. .++.++++++++.+.+.|+++++.+++.|++.|+++|+++++| ++.+++||.++||++++++++++|+|||
T Consensus 237 ~~~-~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~i~~~~v~~l~~~~l~~~~I~av~~~~~~~LerIa 315 (515)
T cd03338 237 DMD-NNIVVNDYAQMDRILREERKYILNMCKKIKKSGCNVLLIQKSILRDAVSDLALHFLAKLKIMVVKDIEREEIEFIC 315 (515)
T ss_pred ccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHHHCCceEEecCCHHHHHHHH
Confidence 775 5678899999999999999999999999999999999999987 8999999999999999999999999999
Q ss_pred HHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCC-CceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhC
Q 009718 320 LVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEM-GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVND 398 (527)
Q Consensus 320 ~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~-~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~ 398 (527)
++|||+++++++++++.++|+|+.|++..+|+++|++|++|++ +++|||+|||+|+.+++|++|+++||++++++++++
T Consensus 316 ~~tGa~ii~sl~~l~~~~LG~~~~v~~~~~g~~~~~~i~~~~~~~~~~TIllrG~t~~~l~e~~r~i~Dal~~~~~~~~~ 395 (515)
T cd03338 316 KTIGCKPVASIDHFTEDKLGSADLVEEVSLGDGKIVKITGVKNPGKTVTILVRGSNKLVLDEAERSLHDALCVIRCLVKK 395 (515)
T ss_pred HHHCCEEecccccCCHhhCCCCceEEEEEECCeEEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999987 689999999999999999999999999999999999
Q ss_pred CccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCC
Q 009718 399 SRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG 478 (527)
Q Consensus 399 ~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g 478 (527)
+++|||||++|++|+.+|+++++..++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.+++.++|+|+.+|
T Consensus 396 ~~vvpGGG~~e~~ls~~l~~~~~~~~~~~~~~~~~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~G~d~~~g 475 (515)
T cd03338 396 RALIPGGGAPEIEIALQLSEWARTLTGVEQYCVRAFADALEVIPYTLAENAGLNPISIVTELRNRHAQGEKNAGINVRKG 475 (515)
T ss_pred CCEEECCCHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCccceeccCC
Confidence 99999999999999999999988889999999999999999999999999999999999999999987778899999999
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhc
Q 009718 479 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITC 518 (527)
Q Consensus 479 ~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~ 518 (527)
++.||++.|||||+.+|+++|+.|+|+|++|||||++|.+
T Consensus 476 ~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~ID~ii~~ 515 (515)
T cd03338 476 AITNILEENVVQPLLVSTSAITLATETVRMILKIDDIVLA 515 (515)
T ss_pred CccchhhcCceecHHHHHHHHHHHHHHHHHHhccchhhcC
Confidence 9999999999999999999999999999999999999864
No 19
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.3e-102 Score=826.00 Aligned_cols=478 Identities=31% Similarity=0.484 Sum_probs=452.8
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhh
Q 009718 8 RDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQD 87 (527)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~ 87 (527)
+++.+..+|.+++..|+.||..++++++|||||+||+|||+++. |+++|||||+||+++|+++||+++|++++|++|+
T Consensus 2 ~~~~~~~~~~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~--g~~~iTnDG~tIlk~i~~~hP~a~l~~~~a~~qd 79 (484)
T cd03342 2 NPKAEVLRRGQALAVNISAAKGLQDVLKTNLGPKGTLKMLVSGA--GDIKLTKDGNVLLSEMQIQHPTASMIARAATAQD 79 (484)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHhcCcCCCCCceEEECCC--CCEEEeccHHHHHHhccCcCHHHHHHHHHHHHhh
Confidence 45677889999999999999999999999999999999999997 9999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccccc
Q 009718 88 DEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKIL 167 (527)
Q Consensus 88 ~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~ 167 (527)
+++||||||+++|+++||+++.+++++|+||..|++||+.|.+.+++.|++++.+++.+ ...+.|.++++|+++||+.
T Consensus 80 ~~~GDGTTt~vvLa~~Ll~~a~~li~~gi~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~--~~~~~l~~va~ts~~sk~~ 157 (484)
T cd03342 80 DITGDGTTSNVLLIGELLKQAERYIQEGVHPRIITEGFELAKNKALKFLESFKVPVEID--TDRELLLSVARTSLRTKLH 157 (484)
T ss_pred hHhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCC--CCHHHHHHHHHHHhCcccc
Confidence 99999999999999999999999999999999999999999999999999999988631 0157899999999999999
Q ss_pred chhhhHHHHHHHHHHHhhcc---CCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeecccccc
Q 009718 168 SQDKEHFGQLAVDAVMRLKG---STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDK 243 (527)
Q Consensus 168 ~~~~~~l~~li~~a~~~~~~---~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~Le~~~ 243 (527)
+.+.+.|++++++|+..+++ .+++++|+|++++||++++|++++|++|++++. +.||+.++||||++++++|++++
T Consensus 158 ~~~~~~l~~l~~~A~~~v~~~~~~~~~~~I~i~ki~ggs~~ds~~i~G~~~~~~~~~~~m~~~~~n~~Ill~~~~le~~~ 237 (484)
T cd03342 158 ADLADQLTEIVVDAVLAIYKPDEPIDLHMVEIMQMQHKSDSDTKLIRGLVLDHGARHPDMPKRVENAYILTCNVSLEYEK 237 (484)
T ss_pred hhHHHHHHHHHHHHHHHHhhcCCccChhHeEEEEecCCChhhceEEeeEEEecCCCCCCCCccccCceEEEEeCCCCCCc
Confidence 99999999999999999965 467789999999999999999999999999974 46899999999999999999988
Q ss_pred ccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhC
Q 009718 244 VKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTG 323 (527)
Q Consensus 244 ~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tG 323 (527)
++.. .++.++ +|+|+++|+|.+++||.++||++++++++++|+|||++||
T Consensus 238 ~~~~-~~~~~~-----------------------------lvi~~~~I~~~al~~l~~~~I~av~~~~~~~l~~ia~~tG 287 (484)
T cd03342 238 TEVN-SGFFYS-----------------------------VVINQKGIDPPSLDMLAKEGILALRRAKRRNMERLTLACG 287 (484)
T ss_pred cccC-cEEEEE-----------------------------EEEeCCCccHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhC
Confidence 7654 333322 9999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCcccc
Q 009718 324 GEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLF 403 (527)
Q Consensus 324 a~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvp 403 (527)
|+++++++++++.++|+|++|++..+|+++|++|++|+.++.+||+|||+|+.+++|+||+++||++++|++++++++||
T Consensus 288 a~ii~~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~tI~lrg~t~~~l~E~er~l~DAl~~vk~~~~~~~~vp 367 (484)
T cd03342 288 GVAMNSVDDLSPECLGYAGLVYERTLGEEKYTFIEGVKNPKSCTILIKGPNDHTITQIKDAIRDGLRAVKNAIEDKCVVP 367 (484)
T ss_pred CEEecccccCChhhCcccceEEEEEECCeEEEEEECCCCCcEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEe
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCccccc
Q 009718 404 GGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDM 483 (527)
Q Consensus 404 GGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~ 483 (527)
|||++|++|+.+|+++++..++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.+++.++|+|+.+|++.||
T Consensus 368 GGGa~e~~ls~~L~~~~~~~~~~~~~~i~~~a~Al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~ 447 (484)
T cd03342 368 GAGAFEVALYAHLKEFKKSVKGKAKLGVQAFADALLVIPKTLAENSGLDVQETLVKLQDEYAEGGQVGGVDLDTGEPMDP 447 (484)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCceeeeCCCCcccch
Confidence 99999999999999999888999999999999999999999999999999999999999998888889999999999999
Q ss_pred ccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcC
Q 009718 484 AELGISESFKVKQAVLLSATEAAEMILRVDEIITCA 519 (527)
Q Consensus 484 ~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~ 519 (527)
++.|||||+.+|+++|+.|+|+|++|||||++|+++
T Consensus 448 ~~~gI~dp~~vk~~~l~~A~e~a~~iL~ID~ii~~~ 483 (484)
T cd03342 448 ESEGIWDNYSVKRQILHSATVIASQLLLVDEIIRAG 483 (484)
T ss_pred hhcCcEEcHHHHHHHHHHHHHHHHHHhhhhHhhhcC
Confidence 999999999999999999999999999999999764
No 20
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=9.1e-101 Score=813.72 Aligned_cols=465 Identities=32% Similarity=0.531 Sum_probs=441.6
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+++++++...|++++..|+.||..++++++|||||+|++|||+++. |+++|||||+|||++|+++||+++|+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~ni~a~~~l~~~~~tslGP~G~~kmi~~~~--g~~~iTnDG~tIlk~l~~~hP~a~ll~~~a~~ 81 (480)
T cd03337 4 VLNQNTKRESGRKAQLGNIQAAKTVADVIRTCLGPRAMLKMLLDPM--GGIVLTNDGNAILREIDVAHPAAKSMIELSRT 81 (480)
T ss_pred eccCCCccccHHHHHHHHHHHHHHHHHHHhccCCCCcCceEeEcCC--CCEEEeccHHHHHHhccccChHHHHHHHHHHh
Confidence 4577778899999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
|++++||||||+++|+++||+++.+|+++|+||+.|++||+.|.+.+++.|+++++|++..+ .+.|.++++|+++||
T Consensus 82 q~~~~GDGTtt~vvL~~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~---~~~l~~i~~t~l~sK 158 (480)
T cd03337 82 QDEEVGDGTTSVIILAGEILAVAEPFLERGIHPTVIIKAYRKALEDALKILEEISIPVDVND---RAQMLKIIKSCIGTK 158 (480)
T ss_pred HHHHhCCCcchhHhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccccCC---HHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999886422 467999999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhccC-------CCcc-cceeEEeCCCCCCCceeeeeEEEeccCCC-CCCccccCcceEEee
Q 009718 166 ILSQDKEHFGQLAVDAVMRLKGS-------TNLE-SIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVAN 236 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~~~-------~~~~-~I~i~~~~g~~~~dS~l~~Givl~~~~~~-~~~~~~~n~~Ill~~ 236 (527)
+.+.|.+.|++++++|+..++++ ++++ +|+|.+++||+++||++++|++|++++.+ .||++++||||++++
T Consensus 159 ~~~~~~~~ls~lv~~Ai~~v~~~~~~~~~~id~~~~I~i~ki~Ggs~~ds~li~Gvvi~k~~~~~~m~~~~~n~kIlll~ 238 (480)
T cd03337 159 FVSRWSDLMCNLALDAVKTVAVEENGRKKEIDIKRYAKVEKIPGGEIEDSRVLDGVMLNKDVTHPKMRRRIENPRIVLLD 238 (480)
T ss_pred cchhHHHHHHHHHHHHHHhhccccCCCCCcCChhhceEEEEecCCCHHhcccccceEEeccCCCCCCCcEecCCCEEEEe
Confidence 99999999999999999998642 3333 58999999999999999999999999754 689999999999999
Q ss_pred eccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHH
Q 009718 237 TAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIE 316 (527)
Q Consensus 237 ~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~ 316 (527)
|+||+ +|+++++|+|.+++||.++||++++++++++|+
T Consensus 239 ~~Le~------------------------------------------lvi~~k~I~d~al~~L~~~~I~~v~~v~~~~L~ 276 (480)
T cd03337 239 CPLEY------------------------------------------LVITEKGVSDLAQHYLVKAGITALRRVRKTDNN 276 (480)
T ss_pred cCcce------------------------------------------EEEeCCCccHHHHHHHHHCCcEEEEeCCHHHHH
Confidence 98865 999999999999999999999999999999999
Q ss_pred HHHHHhCCccccccCCCCCCCCcc-cceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHH
Q 009718 317 RLALVTGGEIASTFDNPESVKLGH-CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQT 395 (527)
Q Consensus 317 ~la~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~ 395 (527)
|||++|||++++++++++++++|+ |+.+++..+++++|++|++|+++++|||+|||+|+.+++|+||+++||+++++++
T Consensus 277 rIa~~tGa~ii~~~~~l~~~~LG~~~~~~~~~~~~~~~~~~i~~~~~~~~~TIllrG~t~~~l~e~er~l~DAl~v~~~~ 356 (480)
T cd03337 277 RIARACGATIVNRPEELTESDVGTGAGLFEVKKIGDEYFTFITECKDPKACTILLRGASKDVLNEVERNLQDAMAVARNI 356 (480)
T ss_pred HHHHHHCCEEecchhhCCHHHcCCcccEEEEEEeCCeEEEEEEcCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 6777888889999999999998899999999999999999999999999999999
Q ss_pred hhCCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcC-CCcceEE
Q 009718 396 VNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE-GCPAGID 474 (527)
Q Consensus 396 ~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~-~~~~Gid 474 (527)
++++++|||||++|+++|.+|+++++..++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.++ +.++|+|
T Consensus 357 ~~~~~~vpGGGa~E~~ls~~l~~~~~~~~~~~~~~~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid 436 (480)
T cd03337 357 ILNPKLVPGGGATEMAVSHALSEKAKSIEGVEQWPYKAVASALEVIPRTLAQNCGANVIRTLTELRAKHAQGENSTWGID 436 (480)
T ss_pred hcCCCEEeCCCHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCCeECee
Confidence 999999999999999999999999988899999999999999999999999999999999999999999877 6789999
Q ss_pred ccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhh
Q 009718 475 VISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIIT 517 (527)
Q Consensus 475 ~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~ 517 (527)
+.+|+++||++.|||||+.+|+++|+.|+|+|++|||||++|.
T Consensus 437 ~~~g~i~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~id~ii~ 479 (480)
T cd03337 437 GETGDIVDMKELGIWDPLAVKAQTYKTAIEAACMLLRIDDIVS 479 (480)
T ss_pred ccCCCcccchhccCeEcHHHHHHHHHHHHHHHHHHhhhhheec
Confidence 9999999999999999999999999999999999999999985
No 21
>KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-101 Score=738.78 Aligned_cols=500 Identities=37% Similarity=0.561 Sum_probs=477.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhcccCC
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGD 92 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 92 (527)
.++.+++|.+|++|++++++.++|||||+||||||+.+. |+++|||||+|||+.|.+-||+++||++++..||.++||
T Consensus 21 ~ekp~~vR~sni~Aa~avadairTSLGPkGmDKMIq~~~--gev~iTNDGaTILk~m~vlhP~akmLvelS~aQD~eaGD 98 (534)
T KOG0358|consen 21 KEKPEQVRFSNIQAARAVADAIRTSLGPKGMDKMIQTGK--GEVIITNDGATILKQMNVLHPAAKMLVELSAAQDSEAGD 98 (534)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhccCccchhhHhhcCC--CcEEEecChHHHHHHHhhhChHHHHHHHhhhhccccccC
Confidence 466789999999999999999999999999999999997 999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccchhhh
Q 009718 93 GTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKE 172 (527)
Q Consensus 93 Gttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~~~ 172 (527)
||||+|+|+++||+.+..|+++|+||+.|.+.|+.|.+..+++|.+++.|++..+ ++.|.+-+.|+|+||+.+++..
T Consensus 99 GTTsVVilaGaLL~~~~~LL~kgiHPtvIsdsfq~a~~~~v~il~~m~~~velsd---re~Li~~atTsLnSKvvSq~s~ 175 (534)
T KOG0358|consen 99 GTTSVVILAGALLEAAEKLLQKGIHPTVISDSFQSAAKKAVDILDEMSVPVELSD---RESLIKSATTSLNSKVVSQYSS 175 (534)
T ss_pred CceEEEEehhhHHHHHHHHHhcCCCchhhhHHHHHHHHHHHHHHHhcCCCcccCc---HHHHHHHHHhHhhHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999999999987543 5789999999999999999999
Q ss_pred HHHHHHHHHHHhhcc-----CCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeeccccccccc
Q 009718 173 HFGQLAVDAVMRLKG-----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKI 246 (527)
Q Consensus 173 ~l~~li~~a~~~~~~-----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~Le~~~~~~ 246 (527)
.++.+.++|+.++-. ++|+++|+|++..||.++|+++++|++|++... ...|++++++||.+++|.+.++|+..
T Consensus 176 llapmAVdAV~kv~dp~~~~nvdlkdIkivkklGgtvdDte~i~glvl~~~~~~~~gptriekAkIglIQF~iS~PKtdm 255 (534)
T KOG0358|consen 176 LLAPMAVDAVLKVIDPENATNVDLKDIKIVKKLGGTVDDTELIKGLVLTQKASKSAGPTRIEKAKIGLIQFQISPPKTDM 255 (534)
T ss_pred ccchHHHHHHHhccCcccccccchhhhhhHHhhCCccchhhhhcceEEeeecccCCCcchhhhceeeEEEEEecCCCCCc
Confidence 999999999998732 578889999999999999999999999998854 34799999999999999999999988
Q ss_pred cCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccC-----CchHHHHHHHcCCeEEecCChhhHHHHHHH
Q 009718 247 YGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLI-----YNFPEELFADAGILAIEHADFDGIERLALV 321 (527)
Q Consensus 247 ~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I-----~~~~~~~l~~~~I~~i~~v~~~~L~~la~~ 321 (527)
. .++.++++.|+++..+.|++|+.+++++|++.|+|+++.|++| .|.+++||++.+|+|++.+.++|+|.+|+.
T Consensus 256 e-n~iiv~DyaqMdrilkeER~YiL~mcKkIKk~gcnvLliQKSILRdavsDLAlHfL~klkimvikdieRediefick~ 334 (534)
T KOG0358|consen 256 E-NQIIVNDYAQMDRILKEERQYILNMCKKIKKAGCNVLLIQKSILRDAVSDLALHFLAKLKIMVIKDIEREDIEFICKT 334 (534)
T ss_pred c-cceEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEeHHHHHHHHHHHHHHHHHhCcEEEEccccHhhHHHHHhh
Confidence 5 6789999999999999999999999999999999999999986 679999999999999999999999999999
Q ss_pred hCCccccccCCCCCCCCcccceEEEEEEc-CeEEEEEecCCC-CceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCC
Q 009718 322 TGGEIASTFDNPESVKLGHCKLIEEIMIG-EDKLIHFSGVEM-GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDS 399 (527)
Q Consensus 322 tGa~ii~~~~~l~~~~lG~~~~v~~~~i~-~~~~~~~~~~~~-~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~ 399 (527)
+|+.++.+++.+++..+|+++.+++...+ +.+++.+.|+.+ +..+||++||++...++|.+|++|||||++|++++.+
T Consensus 335 l~c~Pia~id~f~~d~Lg~adlveE~~~~G~gkivk~tg~~n~g~tvsil~RGsn~lvleEaeRSlhDALCVirCLvk~r 414 (534)
T KOG0358|consen 335 LGCKPIADIDHFTADKLGSADLVEETDSSGEGKIVKITGIQNAGRTVSILLRGSNKLVLEEAERSLHDALCVIRCLVKKR 414 (534)
T ss_pred cCCeecchhhhcChhhcCcchhhhhcccCCCccEEEEEEeecCCCceEEEEecCchhhhHHHhhhhhhhhHHHHhhhhcc
Confidence 99999999999999999999999987554 459999999887 7899999999999999999999999999999999999
Q ss_pred ccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCc
Q 009718 400 RVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGS 479 (527)
Q Consensus 400 ~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~ 479 (527)
.++||||+.|+++|..|.+++...++.+.|++++||+|||.||.+||+|||++|..++++||..|.+|+..+|++++.|.
T Consensus 415 ~li~GGGapEieia~~L~~~a~t~eG~~~yc~rafA~AlEvIP~tLAeNAGLnpI~~VtELRn~haqge~~aGInVRkg~ 494 (534)
T KOG0358|consen 415 ALIAGGGAPEIEIALRLSALARTLEGVEAYCWRAFADALEVIPYTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGG 494 (534)
T ss_pred ceecCCCCcchHHHHHHHHHHhhhccchhHHHHHHHHHHhcccHhHHhhCCCChhhHHHHHHHHHhcCCcccceeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhc
Q 009718 480 VGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITC 518 (527)
Q Consensus 480 ~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~ 518 (527)
+.||++..|+.|+.|..++++.|+|++.+||+||+|+..
T Consensus 495 ~tni~ee~VvQPllVs~SaitlA~Etvr~ILKIDDIv~a 533 (534)
T KOG0358|consen 495 ITNILEENVVQPLLVSISAITLATETVRSILKIDDIVNA 533 (534)
T ss_pred chhhHHHhcccceeeeHHHHHHHHHHHHHHhhhhhhccc
Confidence 999999999999999999999999999999999999865
No 22
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=7.8e-98 Score=789.71 Aligned_cols=460 Identities=34% Similarity=0.523 Sum_probs=435.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhcccCCC
Q 009718 14 EKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDG 93 (527)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDG 93 (527)
.++++++..|+.||..|++++++||||+|++|||++.. |+++|||||+||+++|+++||+++|+++++++|++++|||
T Consensus 4 ~~~~~~~~~ni~a~~~l~~~v~ttlGP~G~~kmi~~~~--g~~~iTnDG~tIlk~l~~~hP~a~ll~~~a~~~~~~~GDG 81 (472)
T cd03341 4 SGLEEAVLRNIEACKELSQITRTSYGPNGMNKMVINHL--EKLFVTSDAATILRELEVQHPAAKLLVMASQMQEEEIGDG 81 (472)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCcCCCCCceEEEcCC--CCEEEeCcHHHHHHhccccCHHHHHHHHHHHHHhhhhCCC
Confidence 45689999999999999999999999999999999997 9999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccc-cCCchhhhHHHHHHHHHHhhcccccchhhh
Q 009718 94 TTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVD-NKENAETFKSDLMKIAMTTLSSKILSQDKE 172 (527)
Q Consensus 94 ttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~-~~~~~~~~~~~l~~i~~t~l~sK~~~~~~~ 172 (527)
|||+++|+++||+++.+++++|+||+.|++||+.|.+.+++.|++++++ +.... ..+.+..+++|+++||..+ +++
T Consensus 82 TTt~vvL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~--~~~~l~~i~~t~l~sk~~~-~~~ 158 (472)
T cd03341 82 TNLVVVLAGELLEKAEELLRMGLHPSEIIEGYEKALKKALEILEELVVYKIEDLR--NKEEVSKALKTAIASKQYG-NED 158 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccccCCcc--CHHHHHHHHHHHhcccccc-hHH
Confidence 9999999999999999999999999999999999999999999999876 43211 1467999999999999876 689
Q ss_pred HHHHHHHHHHHhhcc----CCCcccceeEEeCCCCCCCceeeeeEEEeccCCCCCCccccCcceEEeeeccccccccccC
Q 009718 173 HFGQLAVDAVMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYG 248 (527)
Q Consensus 173 ~l~~li~~a~~~~~~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~Ill~~~~Le~~~~~~~~ 248 (527)
+|++++++|+..+++ .+++++|+|++++||+++||++++|++|+++. ..+++.++||+|++++++|++
T Consensus 159 ~l~~l~~~a~~~~~~~~~~~~~~~~i~i~ki~Gg~~~ds~lv~Giv~~~~~-~~~~~~~~n~~Ili~~~~Le~------- 230 (472)
T cd03341 159 FLSPLVAEACISVLPENIGNFNVDNIRVVKILGGSLEDSKVVRGMVFKREP-EGSVKRVKKAKVAVFSCPFDI------- 230 (472)
T ss_pred HHHHHHHHHHHHHhhccCCcCChhHeEEEEecCCCcccceEEeeEEEcccc-CCCceeccCCcEEEEeccccC-------
Confidence 999999999999863 45778999999999999999999999998775 356789999999999998875
Q ss_pred eEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCcccc
Q 009718 249 ARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIAS 328 (527)
Q Consensus 249 ~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ii~ 328 (527)
++++|+++++|+|.+++||.++||++++++++++|+|||++|||++++
T Consensus 231 --------------------------------g~~lvi~~~~I~d~al~~l~~~~I~av~~~~~~~Le~Ia~~tGa~ii~ 278 (472)
T cd03341 231 --------------------------------GVNVIVAGGSVGDLALHYCNKYGIMVIKINSKFELRRLCRTVGATPLP 278 (472)
T ss_pred --------------------------------CCeEEEECCCCCHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEec
Confidence 889999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcccceEEEEEEcCeEEEEEecCCC-CceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCCh
Q 009718 329 TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEM-GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGW 407 (527)
Q Consensus 329 ~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~-~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~ 407 (527)
+++++++.++|+|+.|++..+|+++|++|++|.. +++|||+|||+|+.+++|+||+++||++++|++++++++|||||+
T Consensus 279 ~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~er~i~DAl~~~~~ai~~~~vVpGGG~ 358 (472)
T cd03341 279 RLGAPTPEEIGYCDSVYVEEIGDTKVVVFRQNKEDSKIATIVLRGATQNILDDVERAIDDGVNVFKSLTKDGRFVPGAGA 358 (472)
T ss_pred ccccCCHhHCCCceEEEEEEECCeeEEEEEccCCCCCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCcCH
Confidence 9999999999999999999999999999999987 889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCC--ccccccc
Q 009718 408 PEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG--SVGDMAE 485 (527)
Q Consensus 408 ~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g--~~~d~~~ 485 (527)
+|++++.+|+++++..++++++++++|++||+.||++|++|||+|+.+++.+|+..|.+++.++|||+.+| ++.||++
T Consensus 359 ~e~~ls~~l~~~~~~~~~~~~~~~~~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~Gid~~~g~~~~~d~~~ 438 (472)
T cd03341 359 TEIELAKKLKEYGEKTPGLEQYAIKKFAEAFEVVPRTLAENAGLDATEVLSELYAAHQKGNKSAGVDIESGDEGTKDAKE 438 (472)
T ss_pred HHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCeeeeeccCCCCCccChhh
Confidence 99999999999988888999999999999999999999999999999999999999977777899999999 9999999
Q ss_pred CCcccchHHHHHHHHHHHHHHHHHHhHhHHhhc
Q 009718 486 LGISESFKVKQAVLLSATEAAEMILRVDEIITC 518 (527)
Q Consensus 486 ~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~ 518 (527)
.|||||+.||+++|+.|+|+|++|||||++|..
T Consensus 439 ~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~ 471 (472)
T cd03341 439 AGIFDHLATKKWAIKLATEAAVTVLRVDQIIMA 471 (472)
T ss_pred ccceecHHHHHHHHHHHHHHHHHHhhhcceeec
Confidence 999999999999999999999999999999865
No 23
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=7.3e-97 Score=784.48 Aligned_cols=458 Identities=47% Similarity=0.691 Sum_probs=438.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhcccCC
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGD 92 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 92 (527)
...+++++.+|++||..++++++|||||+|++|||+++. |+++|||||+||+++|+++||+++++++++++|++++||
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~--g~~~iTnDG~tIlk~i~~~hp~a~ll~~~~~~~~~~~GD 80 (464)
T cd00309 3 REFGEEARLSNINAAKALADAVKTTLGPKGMDKMLVDSL--GDPTITNDGATILKEIEVEHPAAKLLVEVAKSQDDEVGD 80 (464)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhcccCCCcCcEEEEcCC--CCeEEEccHHHHHHhccCcCHHHHHHHHHHHHHHhHhCC
Confidence 457889999999999999999999999999999999997 999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccchhhh
Q 009718 93 GTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKE 172 (527)
Q Consensus 93 Gttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~~~ 172 (527)
||||+++|+++|++++.+++++|+||..|++||+.|++.+++.|+++++|.+..+ .+.|+++++|+++||+.+.|++
T Consensus 81 GTtt~viL~~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~---~~~l~~ia~tsl~sK~~~~~~~ 157 (464)
T cd00309 81 GTTTVVVLAGELLKEAEKLLAAGIHPTEIIRGYEKAVEKALEILKEIAVPIDVED---REELLKVATTSLNSKLVSGGDD 157 (464)
T ss_pred chhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCccCCCC---HHHHHHHhHhcccccccccchH
Confidence 9999999999999999999999999999999999999999999999999853321 4789999999999999999999
Q ss_pred HHHHHHHHHHHhhcc---CCCcccceeEEeCCCCCCCceeeeeEEEeccCCC-CCCccccCcceEEeeeccccccccccC
Q 009718 173 HFGQLAVDAVMRLKG---STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMDTDKVKIYG 248 (527)
Q Consensus 173 ~l~~li~~a~~~~~~---~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~-~~~~~~~n~~Ill~~~~Le~~~~~~~~ 248 (527)
++++++++|+.++++ .++.+.|+|++.+||++++|++++|++|++++.+ .||+.++||||++++++|++
T Consensus 158 ~l~~l~~~Ai~~v~~~~~~~~~~~I~i~k~~gg~~~ds~li~Gi~~~~~~~~~~m~~~~~n~~Ili~~~~Le~------- 230 (464)
T cd00309 158 FLGELVVDAVLKVGKENGDVDLGVIRVEKKKGGSLEDSELVVGMVFDKGYLSPYMPKRLENAKILLLDCKLEY------- 230 (464)
T ss_pred HHHHHHHHHHHHhccccCccccceEEEEecCCCCcccceeeeeEEEecCCCCCCCceeecCceEEEEecCcce-------
Confidence 999999999999976 3557889999999999999999999999999754 57899999999999999875
Q ss_pred eEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCcccc
Q 009718 249 ARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIAS 328 (527)
Q Consensus 249 ~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ii~ 328 (527)
+|+++++|++.+++||.++||++++++++++|+|||++|||++++
T Consensus 231 -----------------------------------lIi~~~~I~~~al~~L~~~~I~~v~~~~~~~L~~Ia~~tGa~ii~ 275 (464)
T cd00309 231 -----------------------------------VVIAEKGIDDEALHYLAKLGIMAVRRVRKEDLERIAKATGATIVS 275 (464)
T ss_pred -----------------------------------EEecCCCcCHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEec
Confidence 999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChH
Q 009718 329 TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWP 408 (527)
Q Consensus 329 ~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~ 408 (527)
+++++++.++|+|+.+++..+|+++|++|.+++.++.|||+|||+|+.+++|+||+++||++++|++++++++|||||++
T Consensus 276 ~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrG~t~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGGa~ 355 (464)
T cd00309 276 RLEDLTPEDLGTAGLVEETKIGDEKYTFIEGCKGGKVATILLRGATEVELDEAERSLHDALCAVRAAVEDGGIVPGGGAA 355 (464)
T ss_pred ccccCCcccCccccEEEEEEEcCeeEEEEEecCCCCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCcHH
Confidence 99999999999999999999999999999999888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCc
Q 009718 409 EMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGI 488 (527)
Q Consensus 409 E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI 488 (527)
|++++++|++++...++++++++++|++||+.||++|++|||+|+.+++.+|+..|.++..++|+|+.+|++.||++.||
T Consensus 356 E~~ls~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~g~d~~~~~~~d~~~~gI 435 (464)
T cd00309 356 EIELSKALEELAKTLPGKEQLGIEAFADALEVIPRTLAENAGLDPIEVVTKLRAKHAEGGGNAGGDVETGEIVDMKEAGI 435 (464)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhccCCCeeEECCCCcEeehhhccC
Confidence 99999999999988899999999999999999999999999999999999999999877778999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhHhHHhh
Q 009718 489 SESFKVKQAVLLSATEAAEMILRVDEIIT 517 (527)
Q Consensus 489 ~dp~~vk~~~l~~A~~~a~~iL~iD~iI~ 517 (527)
|||+.||+++|+.|+|+|++|||||++|.
T Consensus 436 ~dp~~vk~~~l~~A~e~a~~iL~id~ii~ 464 (464)
T cd00309 436 IDPLKVKRQALKSATEAASLILTIDDIIV 464 (464)
T ss_pred eecHHHHHHHHHHHHHHHHHHHhHHHHhC
Confidence 99999999999999999999999999984
No 24
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.8e-97 Score=780.19 Aligned_cols=502 Identities=38% Similarity=0.584 Sum_probs=472.6
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhcc
Q 009718 10 EANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDE 89 (527)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~ 89 (527)
+.+..+|.++|.+|+.|+..++++||+||||+||+|||+++. |+++|||||+||+++|+++||+|+|++++|++||++
T Consensus 3 ~~~~~~~~~a~~~~~~~~~~la~~vkttLGPkG~~k~l~~~~--g~~~iTnDG~tIlkeielehp~akll~eva~~qd~e 80 (524)
T COG0459 3 GKERKFGEDARRSNIRAARALADAVKTTLGPKGRNKMLVDSG--GDITITNDGVTILKEIELEHPGAKLLVEVAKKQDDE 80 (524)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHhccCCCcCceEEecCC--CCEEEecCcceehhhhhccCchhHHHHHHHHHHHHH
Confidence 345778999999999999999999999999999999999995 899999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccch
Q 009718 90 VGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQ 169 (527)
Q Consensus 90 ~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~~ 169 (527)
+||||||++||+++||+++.+++.+|+||+.|++||++|.+.+++.|+++++|++.+. +.. +++.|+++||..++
T Consensus 81 ~GDGTTtavVLa~all~ea~~li~~gi~P~~I~~G~~~A~~~~~e~l~~~a~~v~~~~----~~~-~~~~t~v~sk~~~~ 155 (524)
T COG0459 81 AGDGTTTAVVLAGALLKEAEKLIAAGIHPTVIKRGYRLAVEKAVEELKEIAKPVSDSE----EEL-KIAITSVASKSANS 155 (524)
T ss_pred hcCchHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCcch----hhh-hhhhheeeeeeccC
Confidence 9999999999999999999999999999999999999999999999999999988652 222 88999999998877
Q ss_pred hhhHHHHHHHHHHHhhcc-CCCcccceeEEeCCCCCCCceeeeeEEEeccC--CCCCC-ccccCcceEEeeecccccccc
Q 009718 170 DKEHFGQLAVDAVMRLKG-STNLESIQIIKKPGGSLKDSFLDEGFILDKKI--GIGQP-KRIENAKILVANTAMDTDKVK 245 (527)
Q Consensus 170 ~~~~l~~li~~a~~~~~~-~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~--~~~~~-~~~~n~~Ill~~~~Le~~~~~ 245 (527)
+ +.|++++++|+.+++. +.+++.|.+++..|++.+++++++|++|++++ ++.|| +.++||+|+++|++|+..+++
T Consensus 156 ~-~~i~~lv~~Av~~v~~~~~d~~~i~~vk~~gg~~~e~~vveG~~~dkg~~s~~~~~~~~~e~~~Ili~d~~l~~~k~~ 234 (524)
T COG0459 156 D-EEIGELVVEAVEKVGKEQSDLDGIIIVKESGGSETELEVVEGMVFDKGYLSPYFMPDKRLENPKILLLDKKLEIKKPE 234 (524)
T ss_pred h-HHHHHHHHHHHHHhcccccccCCeEEEEecCCCccceEEEeeEEecCCccCCCCCCccccccceEEEEcccccccccc
Confidence 6 9999999999999975 23678899999999999999999999999953 35689 899999999999999999998
Q ss_pred ccCeEEEEcCHHHHHHHHHHHH-HHHHHHHHHHHhcCCe-EEEeCccCCchHHHHHHHcCCeEEecCChhhH-HHHHHHh
Q 009718 246 IYGARVRVDSMSKAAEIEGAEK-QKMREKVQKIIAHGIN-CFVNRQLIYNFPEELFADAGILAIEHADFDGI-ERLALVT 322 (527)
Q Consensus 246 ~~~~~i~i~~~~~l~~l~~~e~-~~l~~~~~~I~~~~v~-lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L-~~la~~t 322 (527)
.. .++.+++++++..+.+.|+ +.+..++..+++.+++ +++++++++|++++||.+.+|++++++.++++ ++|+.++
T Consensus 235 l~-~e~~i~~~~~l~~i~e~ee~e~l~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~~Ilt~~~v~~~dl~~~l~~~~ 313 (524)
T COG0459 235 LP-LEIVISSGKPLLIIAEDEEGEALATLVVNILRGGANVVVVKAPGIDDLAKAYLEDIAILTGRRVKKEDLGERLAKLG 313 (524)
T ss_pred Cc-ceeEecCccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhhcceecceecchhhHHHHHHcc
Confidence 87 8899999999999988888 9999999999999999 99999999999999999999999999999999 8999999
Q ss_pred CCccccccCCCCCCCCcc--cceEEEEEEcCeEEEEEecCCC--CceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhC
Q 009718 323 GGEIASTFDNPESVKLGH--CKLIEEIMIGEDKLIHFSGVEM--GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVND 398 (527)
Q Consensus 323 Ga~ii~~~~~l~~~~lG~--~~~v~~~~i~~~~~~~~~~~~~--~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~ 398 (527)
||++++.++++++..+|. |+.+++..++++++.+|++++. +++|||+|||+|+.+++|.+|+++|||+++|+++++
T Consensus 314 ga~~v~~~~d~t~~~~G~~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~tI~vrgate~~ldE~er~i~DAL~~~~~ave~ 393 (524)
T COG0459 314 GAKIVSVLKDLTTIVLGEGAAGLVEETKTGDYDMEKLQERKAKAGGVATILVRGATEVELDEKERRIEDALNVVRAAVEE 393 (524)
T ss_pred CceEEeecccCceeecCccccceEEEeeccchhhhhhhhhhhcCCCeEEEEECCccHhHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999 9999999999999999999985 889999999999999999999999999999999998
Q ss_pred CccccCCChHHHHHHHHHHHHHhcCCC-hhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccC
Q 009718 399 SRVLFGGGWPEMVMAKEVDELARKTPG-KKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVIS 477 (527)
Q Consensus 399 ~~vvpGGG~~E~~la~~L~~~~~~~~~-~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~ 477 (527)
+++|||||++|++++..|++++...++ ++|+++++|++|||.|||+|++|||+|+.+++.+|++.|. .+.+|+|+.+
T Consensus 394 g~iV~GGGa~e~~~a~~L~~~~~~~~g~~e~~~i~~~a~Ale~ip~~La~NaG~d~~~v~~~L~~~~~--~~~~G~d~~~ 471 (524)
T COG0459 394 GKIVPGGGAAEIEAALRLREYAMTVEGGDEQLGIEAFARALEAPPRQLAENAGLDPIEVLSKLRSAHA--TTNYGIDAFT 471 (524)
T ss_pred CCeEeCCCHHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccc--CCccceeccC
Confidence 889999999999999999998545555 9999999999999999999999999999999999999774 3459999999
Q ss_pred Ccc-cccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCC
Q 009718 478 GSV-GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRR 522 (527)
Q Consensus 478 g~~-~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~ 522 (527)
|++ .||.+.|||||+.||+++|+.|+++|++|||+|++|.+.|++
T Consensus 472 ~~~~~dm~~~GI~dP~~v~~~al~~A~e~a~llL~~d~iI~~~~~~ 517 (524)
T COG0459 472 GEYEDDMIEAGIIDPLKVKRSALKNAAEAAGLLLTIDDIIAAKPEE 517 (524)
T ss_pred CccccchHhccCcChHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Confidence 999 779999999999999999999999999999999999999975
No 25
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism. Folding of newly synthesised polypeptides in the crowded cellular environment requires the assistance of molecular chaperone proteins, such as the large bacterial chaperonins GroEL and GroES. GroEL and GroES prevent aggregation by encapsulating individual chains within the so-called 'Anfinsen cage' provided by the GroEL-GroES complex, where they can fold in isolation from one another []. GroEL consists of two heptameric rings of identical ATPase subunits stacked back to back, containing a cage in each ring. Each subunit consists of three domains. The equatorial domain contains the nucleotide binding site and is connected by a flexible intermediate domain with the apical domain. The latter presents several hydrophobic amino-acid side chains at the top of the ring, orientated towards the cavity of the cage. These side chains are involved in binding either a partially folded polypeptide chain or a single molecule of GroES. The assembly of proteins has been thought to be the sole result of properties inherent in the primary sequence of polypeptides themselves. In some cases, however, structural information from other protein molecules is required for correct folding and subsequent assembly into oligomers []. These 'helper' molecules are referred to as molecular chaperones, a subfamily of which are the chaperonins [], which include 10 kDa and 60 kDa proteins. These are found in abundance in prokaryotes, chloroplasts and mitochondria. They are required for normal cell growth (as demonstrated by the fact that no temperature sensitive mutants for the chaperonin genes can be found in the temperature range 20 to 43 degrees centigrade []), and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between 6 to 8 identical subunits, whereas the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The cpn10 and cpn60 oligomers also require Mg2+-ATP in order to interact to form a functional complex, although the mechanism of this interaction is as yet unknown []. This chaperonin complex is essential for the correct folding and assembly of polypeptides into oligomeric structures, of which the chaperonins themselves are not a part []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. The 60 kDa form of chaperonin is the immunodominant antigen of patients with Legionnaire's disease [], and is thought to play a role in the protection of the Legionella bacteria from oxygen radicals within macrophages. This hypothesis is based on the finding that the cpn60 gene is upregulated in response to hydrogen peroxide, a source of oxygen radicals. Cpn60 has also been found to display strong antigenicity in many bacterial species [], and has the potential for inducing immune protection against unrelated bacterial infections. The RuBisCO subunit binding protein (which has been implicated in the assembly of RuBisCO) and cpn60 have been found to be evolutionary homologues, the RuBisCO subunit binding protein having the C-terminal Gly-Gly-Met repeat found in all bacterial cpn60 sequences. Although the precise function of this repeat is unknown, it is thought to be important as it is also found in 70 kDa heat-shock proteins []. The crystal structure of Escherichia coli GroEL has been resolved to 2.8A []. The TCP-1 family of proteins act as molecular chaperones for tubulin, actin and probably some other proteins. They are weakly, but significantly, related to the cpn60/groEL chaperonin family. ; GO: 0005524 ATP binding, 0044267 cellular protein metabolic process; PDB: 3IZH_B 3IZI_I 3LOS_I 3IYF_H 3KFK_C 3KFE_E 3RUV_C 3IZK_L 3J02_B 3RUQ_A ....
Probab=100.00 E-value=3.3e-94 Score=771.85 Aligned_cols=482 Identities=43% Similarity=0.647 Sum_probs=459.7
Q ss_pred HHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhcccCCChhHHHHHHHHHHHHHH
Q 009718 30 IADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAE 109 (527)
Q Consensus 30 l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGttt~vlL~~~Ll~~~~ 109 (527)
|++++++||||+|++|||++.. |+++|||||+||+++|+++||+++++++++++|++++||||||+++|+++|++++.
T Consensus 1 l~~~v~sslGP~G~~kli~~~~--g~~~iTndg~tIl~~l~~~~P~~~ll~~~~~~~~~~~GDGtts~vlL~~~ll~~~~ 78 (485)
T PF00118_consen 1 LADIVKSSLGPKGRDKLIVNDS--GKIIITNDGATILKSLKINHPIAKLLVEASKSQDEEVGDGTTSVVLLACELLRNAL 78 (485)
T ss_dssp HHHHHGCCSSTTS-EEEEEESS--SSEEEESSHHHHHHHSTBSSHHHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHH
T ss_pred ChhhcccCcCCCCCeEEEEcCC--CCeEEEechhHHHHHhhhccchhhhHHHhHHHHHhhhccccceeeecccchhhhhh
Confidence 6899999999999999999986 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHhhccCC
Q 009718 110 KLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGST 189 (527)
Q Consensus 110 ~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~~~~l~~li~~a~~~~~~~~ 189 (527)
+++++|+||..|++||+.|++.+++.|+++++++..+. +.|+++++|++++|+.+.|.++|++++++|+..+..++
T Consensus 79 ~li~~gi~p~~I~~~~~~~~~~~~~~l~~~s~~~~~~~----~~l~~i~~t~l~~k~~~~~~~~l~~li~~a~~~~~~~~ 154 (485)
T PF00118_consen 79 KLIKKGIHPQEIIRGLQEALKIILEYLEKISIPINNDD----ESLLNIAKTSLNSKISSSWSDHLSKLIVDAIKSIKSNF 154 (485)
T ss_dssp HHHHTTS-HHHHHHHHHHHHHHHHHHHHHHSEESTSTS----HHHHHHHHHHHTTSCGGGCHHHHHHHHHHHHHHHTTTH
T ss_pred hhhhccccccchhhhhhhhhhhhhhhhhhhhccccccc----hhhhhhhcccccccccccchhhhhhhHHHHHHhhcccc
Confidence 99999999999999999999999999999999987652 68999999999999999999999999999996565557
Q ss_pred CcccceeEEeCCCCCCCceeeeeEEEeccCCC-CCCccccCcceEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHH
Q 009718 190 NLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQ 268 (527)
Q Consensus 190 ~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~-~~~~~~~n~~Ill~~~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~ 268 (527)
++++++++++.|++++||++++|++|++++.+ .||+.++||||++++++|++++. . ++++.+++++++..+.+.|++
T Consensus 155 ~~~~i~i~~i~g~~~~dS~li~Giv~~~~~~~~~~~~~~~~~~Ill~~~~L~~~~~-~-~~~~~~~~~~~~~~~~~~e~~ 232 (485)
T PF00118_consen 155 DLDNIKIIKIPGGSISDSELINGIVLDKGFSSPNMPKKIENPKILLLNCPLEYSKS-F-KSEIRITSPEQLDELSKQEKK 232 (485)
T ss_dssp HGGGEEEEEEESSSSGGEEEESEEEESSSBSSTTSBSEEESEEEEEESSEBSSCCH-S-TEEEEESSTHHHHHHHHHHHH
T ss_pred cccchhhhhhccccccccccccceeeeccccccccccccccceEEeeecccccccc-c-ccccchhhHHHHHHHHhhhhh
Confidence 77789999999999999999999999999754 48999999999999999999987 4 589999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCccccccCCCCCCCCcccceEEEEE
Q 009718 269 KMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIM 348 (527)
Q Consensus 269 ~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ 348 (527)
++++++++|.+.++++|+++++|++.++++|.++||.++++++.++|++|+++||++++++++++++.++|+|+.+++..
T Consensus 233 ~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~~i~~v~~~~l~~i~~~tg~~ii~~~~~l~~~~lG~~~~v~~~~ 312 (485)
T PF00118_consen 233 YLKKILEKIINLGVNLIISQKSIDDEALQYLNKNGILVIRRVSKEDLERIARATGASIISSLDDLSDEDLGFCKSVEERE 312 (485)
T ss_dssp HHHHHHHHHHTTTSSEEEESSEBTHHHHHHHHHCTHEEESSEHHHHHHHHHHHHTSBEBSSCGGSTGGGSEEEEEEEEEE
T ss_pred hhccccceEeeeccceeeeecccccccchhhhhhhhhccccchHHHHHhhhcccCCcEecccccccchhhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred EcCeEEEEEe--cCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCCh
Q 009718 349 IGEDKLIHFS--GVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGK 426 (527)
Q Consensus 349 i~~~~~~~~~--~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~ 426 (527)
+++++|++|+ ++..++.+||+|||+++.+++|++|+++||+++++++++++++|||||++|++|+++|++++...+++
T Consensus 313 i~~~~~~~~~~~~~~~~~~~Till~g~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~ 392 (485)
T PF00118_consen 313 IGNKKYIFIEGIGCLSSKICTILLRGPTEFELEERERSIHDALKVLRSALKDGGVVPGGGATELHLSKALRKYAKSLSGK 392 (485)
T ss_dssp ETSSEEEEEEEHSESSSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSSEEEETTTHHHHHHHHHHHHHHHCSSSH
T ss_pred cccccccccccccccccCceEEEeccccchhHHHHHHHHHHHHHHHHHhccCCceeecCcchhhhhhhhHHHhhhcccCc
Confidence 9999999999 58889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHH
Q 009718 427 KSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAA 506 (527)
Q Consensus 427 ~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a 506 (527)
+++++++|++||+.||++|++|||+|+.+++++++..|.+++ ++|+|+.+|++.||.+.|||||+.+|+++|+.|+|+|
T Consensus 393 ~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~h~~~~-~~g~d~~~~~i~~~~~~gi~dp~~~k~~~l~~A~~~a 471 (485)
T PF00118_consen 393 EQLAIEAFADALESIPKTLAQNAGLDSSEVISKLKSFHNNGN-NYGIDLDTGEIVDMKEAGILDPLLVKISALKSAVEIA 471 (485)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHTTSTHHHHHHHHHHHHHSTT-TEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHhhhhhhhccCCCceeeehhhHhhhcccc-ccCcCccCCceeccccccchhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999886544 8999999999999999999999999999999999999
Q ss_pred HHHHhHhHHhhcCC
Q 009718 507 EMILRVDEIITCAP 520 (527)
Q Consensus 507 ~~iL~iD~iI~~~~ 520 (527)
++|||||++|.++|
T Consensus 472 ~~iL~id~iI~~~~ 485 (485)
T PF00118_consen 472 SLILRIDEIIMAKP 485 (485)
T ss_dssp HHHHTEEEEEEESS
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999876
No 26
>PRK00013 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=4.7e-91 Score=744.02 Aligned_cols=463 Identities=24% Similarity=0.381 Sum_probs=424.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccCh----HHHHHHHHHhhhh
Q 009718 12 NEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQD 87 (527)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~ 87 (527)
+...|++++..|++|++.++++++|||||+|++|||+++. |+++|||||+||+++|+++|| +++|++++|++|+
T Consensus 4 ~~~~~~~a~~~~i~a~~~ia~~v~ttLGP~G~~kmi~~~~--g~~~ITnDG~tIlk~i~~~hp~~~~~akll~e~a~~qd 81 (542)
T PRK00013 4 DIKFGEDARRKLLRGVNKLADAVKVTLGPKGRNVVLEKSF--GAPTITKDGVTVAKEIELEDPFENMGAQLVKEVASKTN 81 (542)
T ss_pred hhhchHHHHHHHHHHHHHHHHHhhccCCCCCCCEEEECCC--CCeeEeccHHHHHHHccCCCchhhHHHHHHHHHHHhcC
Confidence 3567899999999999999999999999999999999997 999999999999999999999 7999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccccc
Q 009718 88 DEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKIL 167 (527)
Q Consensus 88 ~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~ 167 (527)
+++||||||+++|+++||+++.+++++|+||..|++||+.|++.+++.|+++++|++. .++|.+++.|+.
T Consensus 82 ~e~GDGTTtvviLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~~~~-----~~~l~~va~ts~----- 151 (542)
T PRK00013 82 DVAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVEAAVEELKKISKPVED-----KEEIAQVATISA----- 151 (542)
T ss_pred cccCCccchHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCC-----HHHHHHHHHhcc-----
Confidence 9999999999999999999999999999999999999999999999999999999863 367999998764
Q ss_pred chhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCC--------CCCccccCcceEEeeecc
Q 009718 168 SQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI--------GQPKRIENAKILVANTAM 239 (527)
Q Consensus 168 ~~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~--------~~~~~~~n~~Ill~~~~L 239 (527)
++++.+++++++|+..++.+. .|+|.+..| ...+|++++|++|++++.+ .+|+.++||+|+++|+.
T Consensus 152 -~~~~~ls~lv~~Av~~v~~~g---~i~i~~~~~-~~~~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ilv~d~~- 225 (542)
T PRK00013 152 -NGDEEIGKLIAEAMEKVGKEG---VITVEESKG-FETELEVVEGMQFDRGYLSPYFVTDPEKMEAELENPYILITDKK- 225 (542)
T ss_pred -cchHHHHHHHHHHHHHhCcCC---cEEEEEcCC-CCceEEEEEeEEecCCcccccccccccCCeEEEecCEEEEEcCc-
Confidence 368999999999999997654 367776665 7889999999999988742 24788999999999974
Q ss_pred ccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcC------CeEEecCC--
Q 009718 240 DTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAG------ILAIEHAD-- 311 (527)
Q Consensus 240 e~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~------I~~i~~v~-- 311 (527)
+++++++. .+++.|.+.++++|+++++|+|.++++|..++ |+++++++
T Consensus 226 -------------i~~~~~l~-----------~~l~~i~~~g~~lvi~~~~I~~~al~~l~~~~~~g~~~i~avr~~~~~ 281 (542)
T PRK00013 226 -------------ISNIQDLL-----------PVLEQVAQSGKPLLIIAEDVEGEALATLVVNKLRGTLKVVAVKAPGFG 281 (542)
T ss_pred -------------cCCHHHHH-----------HHHHHHHHhCCCEEEECCCCcHHHHHHHHHcCCcccceEEEEecCCcc
Confidence 34455543 46788899999999999999999999999997 99999887
Q ss_pred ---hhhHHHHHHHhCCcccc-----ccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCc-------------------
Q 009718 312 ---FDGIERLALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQ------------------- 364 (527)
Q Consensus 312 ---~~~L~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~------------------- 364 (527)
+++|+|||.+||+++++ +++++++.++|+|+.+++. .++|++|+++.+++
T Consensus 282 ~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~~v~~~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~ 358 (542)
T PRK00013 282 DRRKAMLEDIAILTGGTVISEELGLKLEDATLEDLGQAKKVVVT---KDNTTIVDGAGDKEAIKARVAQIKAQIEETTSD 358 (542)
T ss_pred cchhhhHHHHHHHcCCEEecccccCCcccCCHHHCCeeeEEEEe---cCEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCH
Confidence 78999999999999999 7999999999999999954 48999999887654
Q ss_pred ----------------eeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhH
Q 009718 365 ----------------ACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKS 428 (527)
Q Consensus 365 ----------------~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~ 428 (527)
.+||+|||+|+.+++|++|+++||++++|+++++ ++|||||++|++++.+|+++ ...++++|
T Consensus 359 ~~~~~l~eRi~~l~g~~~tI~irG~t~~~l~E~er~i~Dal~~vk~al~~-g~VpGGGa~e~~~s~~L~~~-~~~~~~~~ 436 (542)
T PRK00013 359 YDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEE-GIVPGGGVALLRAAPALEAL-KGLNGDEA 436 (542)
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHc-CcccCcHHHHHHHHHHHHHh-cCCChHHH
Confidence 7899999999999999999999999999999987 69999999999999999998 77889999
Q ss_pred HHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q 009718 429 HAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEM 508 (527)
Q Consensus 429 ~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~ 508 (527)
+++++|++||+.|||+||+|||+|+.+++++|+..| ++++|+|+.+|++.||++.|||||+.||.++|+.|+++|++
T Consensus 437 ~~i~~~a~Al~~ip~~La~NaG~d~~~vl~~l~~~~---~~~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~ 513 (542)
T PRK00013 437 TGINIVLRALEAPLRQIAENAGLEGSVVVEKVKNGK---GKGYGYNAATGEYVDMIEAGIIDPTKVTRSALQNAASVAGL 513 (542)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc---CCCEeEeCCCCceeehhhccCeecHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999877 46799999999999999999999999999999999999999
Q ss_pred HHhHhHHhhcCCCCCC
Q 009718 509 ILRVDEIITCAPRRRE 524 (527)
Q Consensus 509 iL~iD~iI~~~~~~~~ 524 (527)
||+||++|..+|++..
T Consensus 514 iL~id~iI~~~~~~~~ 529 (542)
T PRK00013 514 LLTTEAVVADKPEKKA 529 (542)
T ss_pred HHHHHHHHhcCCcccC
Confidence 9999999999886533
No 27
>PRK12849 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.1e-90 Score=741.08 Aligned_cols=458 Identities=26% Similarity=0.372 Sum_probs=418.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccCh----HHHHHHHHHhhhhc
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDD 88 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~ 88 (527)
...|++++..|+.|++.++++++|||||+||+|||+++. |+++|||||+||+++|+++|| +|+|++++|++|++
T Consensus 5 ~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~--g~~~ITnDGaTIlk~i~~~hp~~~~~a~ll~~~a~~qd~ 82 (542)
T PRK12849 5 IKFDEEARRALERGVNKLADAVKVTLGPKGRNVVIDKSF--GAPTITKDGVSIAKEIELEDPFENLGAQLVKEVASKTND 82 (542)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCC--CCeeEeccHHHHHHHcccCCccHhHHHHHHHHHHHhcCC
Confidence 467899999999999999999999999999999999997 999999999999999999999 99999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccc
Q 009718 89 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILS 168 (527)
Q Consensus 89 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~ 168 (527)
++||||||+++|+++||+++.+|+++|+||..|++||+.|++.+++.|+++++|++. .+.|.++++|+.
T Consensus 83 e~GDGTTtvviLageLL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~~~~-----~~~l~~va~ts~------ 151 (542)
T PRK12849 83 VAGDGTTTATVLAQALVQEGLKNVAAGANPMDLKRGIDKAVEAVVEELKALARPVSG-----SEEIAQVATISA------ 151 (542)
T ss_pred ccCCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC-----HHHHHHHHHHhc------
Confidence 999999999999999999999999999999999999999999999999999999863 367999998874
Q ss_pred hhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCC-ceeeeeEEEeccCCC--------CCCccccCcceEEeeecc
Q 009718 169 QDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKD-SFLDEGFILDKKIGI--------GQPKRIENAKILVANTAM 239 (527)
Q Consensus 169 ~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~d-S~l~~Givl~~~~~~--------~~~~~~~n~~Ill~~~~L 239 (527)
++++++++++++|+..++.+.. +.+. .|++.+| |++++|++|++++.+ .+|+.++||+|+++|+.+
T Consensus 152 ~~~~~l~~lv~~Av~~v~~~g~---i~i~--~g~~~~d~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i 226 (542)
T PRK12849 152 NGDEEIGELIAEAMEKVGKDGV---ITVE--ESKTLETELEVTEGMQFDRGYLSPYFVTDPERMEAVLEDPLILLTDKKI 226 (542)
T ss_pred CChHHHHHHHHHHHHHhccCCc---EeEE--eCCCcceeEEEEEeEEEecCcccCcccccccCceEEeeCcEEEeecCCc
Confidence 3789999999999999976543 3343 6888876 799999999988743 258889999999998743
Q ss_pred ccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHc------CCeEEecCCh-
Q 009718 240 DTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIEHADF- 312 (527)
Q Consensus 240 e~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~------~I~~i~~v~~- 312 (527)
++++++. .+++++.+.++++|+++++|+|.++++|..+ +|++++++++
T Consensus 227 --------------~~~~~~~-----------~~l~~i~~~~~~lvI~~~~I~~~al~~l~~~~~~~~~~i~avr~~~~~ 281 (542)
T PRK12849 227 --------------SSLQDLL-----------PLLEKVAQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFG 281 (542)
T ss_pred --------------CCHHHHH-----------HHHHHHHHhCCCEEEECCCCcHHHHHHHHHhhhhccccEEEEeCCCcc
Confidence 4444443 3578888899999999999999999999999 9999999884
Q ss_pred ----hhHHHHHHHhCCcccc-----ccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCC--------------------
Q 009718 313 ----DGIERLALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG-------------------- 363 (527)
Q Consensus 313 ----~~L~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-------------------- 363 (527)
++|+|||.+|||++++ +++++++.++|+|+.|++ +.++++++++|.++
T Consensus 282 ~~r~~~l~~ia~~tGa~~v~~~~~~~~~~~~~~~LG~~~~v~~---~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~ 358 (542)
T PRK12849 282 DRRKAMLEDIAILTGGTVISEDLGLKLEEVTLDDLGRAKRVTI---TKDNTTIVDGAGDKEAIEARVAQIRRQIEETTSD 358 (542)
T ss_pred chhHhHHHHHHHHhCCEEecccccCCcccCCHHHCceeeEEEE---eeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcCcH
Confidence 4599999999999999 688999889999999985 45899999888764
Q ss_pred ---------------ceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhH
Q 009718 364 ---------------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKS 428 (527)
Q Consensus 364 ---------------~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~ 428 (527)
+.+||+|||+|+.+++|++|+++||++++|+++++ ++|||||++|+++|.+|++++ ..++++|
T Consensus 359 ~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~er~i~DAl~~~~~a~~~-g~VpGGGa~e~~ls~~L~~~~-~~~g~~~ 436 (542)
T PRK12849 359 YDREKLQERLAKLAGGVAVIKVGAATEVELKERKDRVEDALNATRAAVEE-GIVPGGGVALLRAAKALDELA-GLNGDQA 436 (542)
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHc-CeecCCCHHHHHHHHHHHHhh-CCChHHH
Confidence 48999999999999999999999999999999987 699999999999999999998 8899999
Q ss_pred HHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q 009718 429 HAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEM 508 (527)
Q Consensus 429 ~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~ 508 (527)
+++++|++||+.|||+||+|||+|+.+++.+|+..| +++|||+.+|++.||++.|||||+.+|.++|+.|+++|++
T Consensus 437 ~~i~~~a~Al~~ip~~La~NaG~d~~~vi~~L~~~~----~~~G~d~~~g~~~d~~~~GV~Dp~~vk~~al~~A~e~A~~ 512 (542)
T PRK12849 437 AGVEIVRRALEAPLRQIAENAGLDGSVVVAKVLELE----DGFGFNAATGEYGDLIAAGIIDPVKVTRSALQNAASVAGL 512 (542)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhhC----CCcceeCCCCccccHHhccCccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998764 5799999999999999999999999999999999999999
Q ss_pred HHhHhHHhhcCCCC
Q 009718 509 ILRVDEIITCAPRR 522 (527)
Q Consensus 509 iL~iD~iI~~~~~~ 522 (527)
||+||++|..+|++
T Consensus 513 iL~id~iI~~~~~~ 526 (542)
T PRK12849 513 LLTTEALVADKPEE 526 (542)
T ss_pred HHhHHHHHhcCCcc
Confidence 99999999998854
No 28
>PTZ00114 Heat shock protein 60; Provisional
Probab=100.00 E-value=5.7e-90 Score=739.45 Aligned_cols=462 Identities=24% Similarity=0.370 Sum_probs=421.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccCh----HHHHHHHHHhhhh
Q 009718 12 NEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQD 87 (527)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~ 87 (527)
+..+|++++..|+.||..++++++|||||+|++|||+++. |+++|||||+||+++++++|| +++|++++|++|+
T Consensus 16 ~~~~~~~a~~~~i~~~~~la~~v~tTLGP~G~~kmi~~~~--g~~~ITnDG~TIlk~i~~~~p~~~~~a~ll~~~a~~qd 93 (555)
T PTZ00114 16 EIRFGDEARQSLLKGIERLADAVAVTLGPKGRNVIIEQEY--GSPKITKDGVTVAKAIEFSDRFENVGAQLIRQVASKTN 93 (555)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhccCCCCCCcEEEECCC--CCeEEeeChHHHHHhcCcCCcchhHHHHHHHHHHHhhc
Confidence 5678899999999999999999999999999999999997 999999999999999999998 9999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccccc
Q 009718 88 DEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKIL 167 (527)
Q Consensus 88 ~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~ 167 (527)
+++||||||+++||++||+++.+|+++|+||..|++||+.|.+.+++.|+++++|++. .++|.++++|+.+
T Consensus 94 ~evGDGTTtvvvLa~~LL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~v~~-----~~~l~~va~ts~~---- 164 (555)
T PTZ00114 94 DKAGDGTTTATILARAIFREGCKAVAAGLNPMDLKRGIDLAVKVVLESLKEQSRPVKT-----KEDILNVATISAN---- 164 (555)
T ss_pred cccCCcccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC-----HHHHHHHHHHHcC----
Confidence 9999999999999999999999999999999999999999999999999999999863 3679999998764
Q ss_pred chhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCc-eeeeeEEEeccCCC--------CCCccccCcceEEeeec
Q 009718 168 SQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDS-FLDEGFILDKKIGI--------GQPKRIENAKILVANTA 238 (527)
Q Consensus 168 ~~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS-~l~~Givl~~~~~~--------~~~~~~~n~~Ill~~~~ 238 (527)
+++.+++++++|+..++.++. |.+..|+++++| ++++|++|++++.+ .||..++||+|+++|++
T Consensus 165 --~~~~l~~li~eAv~~vg~~g~-----I~~~~g~~~~ds~~~v~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~ 237 (555)
T PTZ00114 165 --GDVEIGSLIADAMDKVGKDGT-----ITVEDGKTLEDELEVVEGMSFDRGYISPYFVTNEKTQKVELENPLILVTDKK 237 (555)
T ss_pred --ChHHHHHHHHHHHHHhCcCCc-----EEEcCCCCccceEEEEEEEEEeccccccccccccccCeEEecCCEEEEEcCC
Confidence 378899999999999976542 666789999998 89999999999743 25889999999999988
Q ss_pred cccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcC------CeEEec---
Q 009718 239 MDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAG------ILAIEH--- 309 (527)
Q Consensus 239 Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~------I~~i~~--- 309 (527)
|+ ++++ +..+++.+.+.++++++++++|++.++++|..++ |+++++
T Consensus 238 L~--------------~~~~-----------i~~~le~i~~~~~~llI~~~~i~~~al~~L~~n~~~g~~~i~avk~~~~ 292 (555)
T PTZ00114 238 IS--------------SIQS-----------ILPILEHAVKNKRPLLIIAEDVEGEALQTLIINKLRGGLKVCAVKAPGF 292 (555)
T ss_pred CC--------------CHHH-----------HHHHHHHHHHhCCCEEEECCCCcHHHHHHHHHhCCCCceEEEEEecCCC
Confidence 75 2233 3355778889999999999999999999999986 899977
Q ss_pred --CChhhHHHHHHHhCCcccccc------CCCCCCCCcccceEEEEEEcCeEEEEEecCC--------------------
Q 009718 310 --ADFDGIERLALVTGGEIASTF------DNPESVKLGHCKLIEEIMIGEDKLIHFSGVE-------------------- 361 (527)
Q Consensus 310 --v~~~~L~~la~~tGa~ii~~~------~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~-------------------- 361 (527)
+++++|+|||.+||++++++. +++++.++|+|+.|++.. +++++++++.
T Consensus 293 g~~~~~~l~~la~~tG~~~i~~~~~~~~l~~~~~~~LG~a~~v~~~~---~~~~~~~~~~~~~~i~~r~~~l~~~~~~~~ 369 (555)
T PTZ00114 293 GDNRKDILQDIAVLTGATVVSEDNVGLKLDDFDPSMLGSAKKVTVTK---DETVILTGGGDKAEIKERVELLRSQIERTT 369 (555)
T ss_pred CcchHHHHHHHHHHhCCEEecccccccCcccCCHHHcCCCceEEEEe---ceEEEEeCCCcHHHHHHHHHHHHHHHHhcC
Confidence 667999999999999999997 778888899999999766 5666776655
Q ss_pred ---------------CCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHh--cCC
Q 009718 362 ---------------MGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELAR--KTP 424 (527)
Q Consensus 362 ---------------~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~--~~~ 424 (527)
.++++||+|||+|+.+++|++|+++||++++|++++ .++|||||++|+++|.+|++++. ..+
T Consensus 370 ~~~~~~~l~eR~~~l~~~~~tI~i~G~t~~~l~E~~r~i~Dal~~~k~a~~-~gvVpGGGa~e~~~s~~L~~~~~~~~~~ 448 (555)
T PTZ00114 370 SEYDKEKLKERLAKLSGGVAVIKVGGASEVEVNEKKDRIEDALNATRAAVE-EGIVPGGGVALLRASKLLDKLEEDNELT 448 (555)
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHh-cCcccCCcHHHHHHHHHHHHHhhccCCc
Confidence 678999999999999999999999999999999997 56999999999999999999876 578
Q ss_pred ChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHH
Q 009718 425 GKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATE 504 (527)
Q Consensus 425 ~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~ 504 (527)
+++|+++++|++||+.|||+|++|||+|+.+++++|++ ++++++|||+.+|++.||++.|||||+.||.++|+.|++
T Consensus 449 ~~~~~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~---~~~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~ 525 (555)
T PTZ00114 449 PDQRTGVKIVRNALRLPTKQIAENAGVEGAVVVEKILE---KKDPSFGYDAQTGEYVNMFEAGIIDPTKVVRSALVDAAS 525 (555)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh---cCCCCEeEeCCCCcEeeHHhCCCEeCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999976 356789999999999999999999999999999999999
Q ss_pred HHHHHHhHhHHhhcCCCCC
Q 009718 505 AAEMILRVDEIITCAPRRR 523 (527)
Q Consensus 505 ~a~~iL~iD~iI~~~~~~~ 523 (527)
+|++||+||++|...|.+.
T Consensus 526 ~A~~iL~id~iI~~~~~~~ 544 (555)
T PTZ00114 526 VASLMLTTEAAIVDLPKEK 544 (555)
T ss_pred HHHHHHhHHHHHHhCCccc
Confidence 9999999999999988663
No 29
>PRK12851 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.1e-89 Score=734.40 Aligned_cols=462 Identities=22% Similarity=0.348 Sum_probs=420.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccCh----HHHHHHHHHhhhhc
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDD 88 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~ 88 (527)
...+++++..|++|++.++++++|||||+|++|||+++. |+++|||||+||+++|+++|| +|+|++++|++|++
T Consensus 6 ~~~~~~a~~~~~~~~~~la~~v~tTlGP~G~~kmi~~~~--g~~~ITnDG~tIlk~i~~~hp~~~~~akll~~~a~~qd~ 83 (541)
T PRK12851 6 VKFHVEAREKMLRGVNILADAVKVTLGPKGRNVVIDKSF--GAPTITNDGVTIAKEIELEDKFENMGAQMVREVASKTND 83 (541)
T ss_pred ecccHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEECCC--CCeeEecCHHHHHHHccCCCchhhHHHHHHHHHHHhhhH
Confidence 456789999999999999999999999999999999997 999999999999999999999 99999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccc
Q 009718 89 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILS 168 (527)
Q Consensus 89 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~ 168 (527)
++||||||+++|+++||+++.+|+++|+||..|++||+.|++.+++.|+++++|++. .+.+.++++++.
T Consensus 84 e~GDGTTtvviLa~~LL~~a~~li~~Gihp~~I~~G~~~a~~~~~~~L~~~s~~~~~-----~~~l~~va~~s~------ 152 (541)
T PRK12851 84 VAGDGTTTATVLAQAIVREGAKAVAAGANPMDLKRGIDRAVAAVVEELKANARPVTT-----NAEIAQVATISA------ 152 (541)
T ss_pred hhCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCC-----HHHHHHHHHHhc------
Confidence 999999999999999999999999999999999999999999999999999998863 367899987754
Q ss_pred hhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCCC--------CCccccCcceEEeeeccc
Q 009718 169 QDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIG--------QPKRIENAKILVANTAMD 240 (527)
Q Consensus 169 ~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~--------~~~~~~n~~Ill~~~~Le 240 (527)
++++.+++++++|+..++.++ .++|.... +...++++++|++|++++.+. ||+.++||+|+++|++++
T Consensus 153 ~~~~~l~~lv~~Av~~vg~~g---~i~i~~~~-~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Ilv~d~~i~ 228 (541)
T PRK12851 153 NGDAEIGRLVAEAMEKVGNEG---VITVEESK-TAETELEVVEGMQFDRGYLSPYFVTDADKMEAELEDPYILIHEKKIS 228 (541)
T ss_pred cChHHHHHHHHHHHHHhcccC---ceEEEEcc-CCCcceEEEEEEEecCCccccccccCCCCCeEEecccEEEEEcCCcC
Confidence 578999999999999997654 34555544 667889999999999997532 889999999999998642
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCC------eEEec-----
Q 009718 241 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGI------LAIEH----- 309 (527)
Q Consensus 241 ~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I------~~i~~----- 309 (527)
+.++ +..+++.|.+.++++|+++++|++.++++|..++| +++++
T Consensus 229 --------------~~~~-----------i~~~l~~i~~~~~~lvi~~~~I~~~al~~l~~n~i~g~~~i~av~~p~~~~ 283 (541)
T PRK12851 229 --------------NLQD-----------LLPVLEAVVQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGD 283 (541)
T ss_pred --------------cHHH-----------HHHHHHHHHHhCcCEEEECCCCChHHHHHHHHcCCcCceeEEEEecCcccc
Confidence 2221 45678899999999999999999999999999997 88886
Q ss_pred CChhhHHHHHHHhCCcccc-----ccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCc--------------------
Q 009718 310 ADFDGIERLALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQ-------------------- 364 (527)
Q Consensus 310 v~~~~L~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~-------------------- 364 (527)
+++++|+|||.+|||++++ +++++++.++|+|+.|++.. ++|+++.+|..++
T Consensus 284 ~~~~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~~~~v~~~~---~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~ 360 (541)
T PRK12851 284 RRKAMLEDIAILTGGTVISEDLGIKLENVTLEQLGRAKKVVVEK---ENTTIIDGAGSKTEIEGRVAQIRAQIEETTSDY 360 (541)
T ss_pred ccHhHHHHHHHHhCCEEeccCCCCCcCcCCHHHcCCccEEEEEc---ceEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHH
Confidence 9999999999999999999 68888888899999998655 8899998886642
Q ss_pred ---------------eeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhHH
Q 009718 365 ---------------ACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSH 429 (527)
Q Consensus 365 ---------------~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~ 429 (527)
.+||+|||+|+.+++|++|+++||++++++++++ ++|||||++|+++|..|++++.. ++++|+
T Consensus 361 ~~~~l~~ri~~l~g~~~tI~irG~t~~~l~E~er~i~DAl~a~~~al~~-g~VpGGGa~e~~~s~~L~~~~~~-~~~~~~ 438 (541)
T PRK12851 361 DREKLQERLAKLAGGVAVIRVGASTEVEVKEKKDRVDDALHATRAAVEE-GIVPGGGVALLRAVKALDKLETA-NGDQRT 438 (541)
T ss_pred HHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHc-CcccCchHHHHHHHHHHHHHhcC-CcHHHH
Confidence 8899999999999999999999999999999987 69999999999999999999876 899999
Q ss_pred HHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHH
Q 009718 430 AIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMI 509 (527)
Q Consensus 430 ~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~i 509 (527)
++++|++||+.|||+|++|||+|+.+++++|+..| .++|+|+.+|+++||++.|||||+.+|.++|+.|+|+|++|
T Consensus 439 ~~~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~----~~~G~d~~~g~~~d~~~~GIiDp~~vk~~al~~A~e~A~~i 514 (541)
T PRK12851 439 GVEIVRRALEAPVRQIAENAGAEGSVVVGKLREKP----GGYGFNAATNEYGDLYAQGVIDPVKVVRTALQNAASVAGLL 514 (541)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhC----CCeeeeCCCCCccchhhccCEecHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998765 47999999999999999999999999999999999999999
Q ss_pred HhHhHHhhcCCCCCCC
Q 009718 510 LRVDEIITCAPRRRED 525 (527)
Q Consensus 510 L~iD~iI~~~~~~~~~ 525 (527)
|+||++|..+|++.++
T Consensus 515 L~id~iI~~~~~~~~~ 530 (541)
T PRK12851 515 LTTEAMVAEKPKKEPA 530 (541)
T ss_pred HhHHHhhhcCCCCCCC
Confidence 9999999998866443
No 30
>KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-89 Score=678.58 Aligned_cols=513 Identities=29% Similarity=0.446 Sum_probs=478.7
Q ss_pred cccccchhhhhhh-HHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHH
Q 009718 4 ERIFRDEANEEKG-ERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDI 82 (527)
Q Consensus 4 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~ 82 (527)
..+|++|+++.+| +++...|+.||+.++++++|+|||+||+||++|.. |++++|||.+||+++|+++||+||+|+++
T Consensus 11 ~q~~k~g~r~~~~~e~~v~~ni~a~~ela~~~rs~yGpng~nK~vvnh~--~k~~~TndaatIlrelev~HPaakllv~a 88 (537)
T KOG0362|consen 11 PQMLKEGARSPSGEEEAVIRNIAAVRELANVIRSAYGPNGRNKMVVNHL--GKTFVTNDAATILRELEVEHPAAKLLVEA 88 (537)
T ss_pred hhHHhccccCcccchHHHHHHHHHHHHHHHHHHhhcCCCCcceeeeccc--ceEEEcCChHHHHHHhhccCcHHHHHHHH
Confidence 3478999999888 58889999999999999999999999999999997 99999999999999999999999999999
Q ss_pred HhhhhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhh
Q 009718 83 SKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTL 162 (527)
Q Consensus 83 ~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l 162 (527)
++.|+++.||||+++|+|+++||++|++||+.|++|.+|++||+.|.+.+++.|+++.+....+. ++....+++++
T Consensus 89 ~~~q~~~iGDgtnfvvvla~~LLe~Ae~li~~Gl~~~ei~~gy~~A~~~~~e~l~~lv~~~~~d~----~d~~~~~rs~i 164 (537)
T KOG0362|consen 89 TQMQEEEIGDGTNFVVVLAGALLEQAEELIRMGLTPAEISEGYETATKEALEILPELVVQSIGDL----EDKEWALRSVI 164 (537)
T ss_pred HHHHHHhhCCCceEeehhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHhcccc----cChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999876533221 12237888888
Q ss_pred cccccchhhhHHHHHHHHHHHhhccC--CCcccceeEEeCCCCCCCceeeeeEEEeccCCCCCCccccCcceEEeeeccc
Q 009718 163 SSKILSQDKEHFGQLAVDAVMRLKGS--TNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMD 240 (527)
Q Consensus 163 ~sK~~~~~~~~l~~li~~a~~~~~~~--~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~Ill~~~~Le 240 (527)
+||.- .+.+++++++++|+..+.+. |+.++|+|+++.|+++++|+++.|++|++.. .+.++..+++||++++||++
T Consensus 165 ~skq~-~~ed~l~~lVa~ac~si~p~~~FnvdnIrVcKi~Gg~l~~S~Vv~GmVfkr~~-eG~v~~ak~arvAvf~cP~d 242 (537)
T KOG0362|consen 165 MSKQY-GNEDFLTKLVAKACVSILPLMSFNVDNIRVCKILGGGLEDSCVVCGMVFKRDP-EGEVKSAKDARVAVFACPFD 242 (537)
T ss_pred HHhhc-chHHHHHHHHHHHHHhhcccccccccceEEEEEecCCcccceeeEEEEecccc-CCcccccccceeEEEecCCC
Confidence 88854 34789999999999998776 8899999999999999999999999999885 45668889999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009718 241 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 320 (527)
Q Consensus 241 ~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~ 320 (527)
...++++ .++.+++++++..|.+.|...+...++.|.+.|+++|++.+.+++..++|+++.+|++++--++.||+|||+
T Consensus 243 ~~~TEtk-gTvLi~~A~el~~FSKgEe~lle~~vk~Ia~~gvkViV~~g~V~em~Lhflnky~ImVlqi~Sk~eLrrlcr 321 (537)
T KOG0362|consen 243 IAQTETK-GTVLLKNAKELLNFSKGEEALLEEQVKAIADAGVKVIVSGGKVDEMTLHFLNKYKIMVLQINSKFDLRRLCR 321 (537)
T ss_pred cccccCc-ceeeecCcHhhhhhccccHHHHHHHHHHHHhcCCeEEEecCccchhhhhhhccccEEEEEeccHhhHHHHHH
Confidence 9999997 568899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEec-CCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCC
Q 009718 321 VTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSG-VEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDS 399 (527)
Q Consensus 321 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~-~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~ 399 (527)
..||++++++..+.+..+|+|++|...++|+.+++.|.. +..+++.|++|||++...+|+.||+++|++++.+..++++
T Consensus 322 tvGA~~l~rl~~P~~~~lG~~d~V~~~EiG~~~v~vF~~e~~~~~~~TvVLRgst~s~LDd~ERAVddgV~tyK~l~~d~ 401 (537)
T KOG0362|consen 322 TVGATALPRLFPPAPEELGYCDSVSTQEIGDTLVVVFRWESTGTRVATVVLRGATQSILDDAERAVDDGVNTYKALCSDS 401 (537)
T ss_pred HcCCccchhccCCCCccccccceeeeeecCCceEEEEeeccCCCceeEEEEcccchhhHHHHHHHHHHhHHHhhhhccCC
Confidence 999999999999999999999999999999999999984 4456799999999999999999999999999999999999
Q ss_pred ccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCC-
Q 009718 400 RVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG- 478 (527)
Q Consensus 400 ~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g- 478 (527)
+++||+|++|++|+..|.+++...++..|++++.||+||+.+|++|++|||+++.++++++...|. +....|+|+.-+
T Consensus 402 rLlpGagatEieLak~i~~~g~~~~Gl~q~Aik~fa~Ale~~PktlaEnagl~~~evia~ly~~h~-~g~~~g~di~~e~ 480 (537)
T KOG0362|consen 402 RLLPGAGATEIELAKQISSRGATLPGLKQLAIKKFAEALEVLPKTLAENAGLAVTEVIAKLYAVHQ-GGKNLGMDIEAEG 480 (537)
T ss_pred ccccCCchhHHHHHHHHHHhcccCCCcchhHHHHHHHHhccccHhHHHhcCCcHHHHHHHHHHhhc-CCCcceeeeeccc
Confidence 999999999999999999999999999999999999999999999999999999999999999996 455689998777
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCCCC
Q 009718 479 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRREDR 526 (527)
Q Consensus 479 ~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~~~ 526 (527)
...|+.++||||-+..|.++++.|+|+|+++|++|+||+++|...||-
T Consensus 481 ~~~d~~~~~i~D~~~~K~~a~k~at~aa~tvl~vDqiimak~aggp~~ 528 (537)
T KOG0362|consen 481 GTIDVREEGIWDTLAVKAQAIKLATEAALTVLTVDQIIMAKKAGGPKP 528 (537)
T ss_pred cccChhhhchHHHHHHHHHHHHHHHhhhheeeehhheeEecccCCCCC
Confidence 589999999999999999999999999999999999999998777664
No 31
>cd03344 GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=4e-89 Score=727.53 Aligned_cols=453 Identities=25% Similarity=0.375 Sum_probs=415.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccCh----HHHHHHHHHhhhhc
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDD 88 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~ 88 (527)
...|.+++..|++||+.++++++|||||+|++|||+++. |+++|||||+||+++++++|| +++|+++++++|++
T Consensus 3 ~~~g~~a~~~~i~~~~~l~~~v~ttlGP~G~~kmi~~~~--g~~~iTnDG~tIlk~i~~~hp~~~~~a~ll~~~a~~qd~ 80 (520)
T cd03344 3 IKFGEEARKALLRGVNKLADAVKVTLGPKGRNVVIEKSF--GSPKITKDGVTVAKEIELEDPFENMGAQLVKEVASKTND 80 (520)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEECCC--CCeEEEecHHHHHHHcccCCcchhHHHHHHHHHHhhhcc
Confidence 457889999999999999999999999999999999997 999999999999999999999 99999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccc
Q 009718 89 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILS 168 (527)
Q Consensus 89 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~ 168 (527)
++||||||+++|+++||+++.+++++|+||..|++||+.|.+.++++|+++++|++ + .++|.++++|++++
T Consensus 81 e~GDGTTtvviLa~~Ll~~~~~li~~gi~p~~I~~G~~~a~~~~~~~L~~~~~~i~-~----~~~l~~va~ts~~~---- 151 (520)
T cd03344 81 VAGDGTTTATVLARAIIKEGLKAVAAGANPMDLKRGIEKAVEAVVEELKKLSKPVK-T----KEEIAQVATISANG---- 151 (520)
T ss_pred ccCCCcchHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHhccCCC-C----HHHHHHHHHHhcCC----
Confidence 99999999999999999999999999999999999999999999999999999986 3 46899999998753
Q ss_pred hhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCC-ceeeeeEEEeccCCCC--------CCccccCcceEEeeecc
Q 009718 169 QDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKD-SFLDEGFILDKKIGIG--------QPKRIENAKILVANTAM 239 (527)
Q Consensus 169 ~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~d-S~l~~Givl~~~~~~~--------~~~~~~n~~Ill~~~~L 239 (527)
++++++++++|+..++.+.. |.+ .+|++.+| +++++|++|++++.+. ++..++||+|+++|++|
T Consensus 152 --~~~l~~lv~~A~~~v~~~~~---i~v--~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~l 224 (520)
T cd03344 152 --DEEIGELIAEAMEKVGKDGV---ITV--EEGKTLETELEVVEGMQFDRGYLSPYFVTDPEKMEVELENPYILLTDKKI 224 (520)
T ss_pred --hHHHHHHHHHHHHHhccCCc---EEE--EeCCCcceeEEEEeeEEecCCCCCCccccCcccCeEEeeCCEEEEECCCC
Confidence 78999999999999976542 333 58999988 7999999999987432 33679999999999875
Q ss_pred ccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCC------eEEecC---
Q 009718 240 DTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGI------LAIEHA--- 310 (527)
Q Consensus 240 e~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I------~~i~~v--- 310 (527)
++++++. .+++.+.+.++++++++++|++.++++|..++| +++++.
T Consensus 225 --------------~~~~~l~-----------~~l~~i~~~~~~lvi~~~~i~~~al~~l~~~~i~~~~~v~avk~~~~~ 279 (520)
T cd03344 225 --------------SSIQELL-----------PILELVAKAGRPLLIIAEDVEGEALATLVVNKLRGGLKVCAVKAPGFG 279 (520)
T ss_pred --------------CCHHHHH-----------HHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCccCceEEEEeCCCCC
Confidence 3344433 357889999999999999999999999999999 888766
Q ss_pred --ChhhHHHHHHHhCCcccc-----ccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCC--------------------
Q 009718 311 --DFDGIERLALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG-------------------- 363 (527)
Q Consensus 311 --~~~~L~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-------------------- 363 (527)
++++|+|||.+|||++++ ++++++++++|+|+.|++.. ++|+++++|..+
T Consensus 280 ~~~~~~l~~la~~tGa~~~~~~~~~~~~~~~~~~LG~~~~v~~~~---~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~ 356 (520)
T cd03344 280 DRRKAMLEDIAILTGGTVISEELGLKLEDVTLEDLGRAKKVVVTK---DDTTIIGGAGDKAAIKARIAQIRKQIEETTSD 356 (520)
T ss_pred cccHHHHHHHHHHhCCEEecccccCCcccCCHHHCCcceEEEEee---ceEEEEeCCCCHHHHHHHHHHHHHHHHhcCCH
Confidence 889999999999999999 78888888999999999655 789999888664
Q ss_pred ---------------ceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhH
Q 009718 364 ---------------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKS 428 (527)
Q Consensus 364 ---------------~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~ 428 (527)
+.|||+|||+|+.+++|++|+++||++++|+++++ ++|||||++|++++.+|++++. .++++|
T Consensus 357 ~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~~r~i~Dal~~~k~a~~~-g~VpGGGa~e~~~s~~L~~~~~-~~~~~~ 434 (520)
T cd03344 357 YDKEKLQERLAKLSGGVAVIKVGGATEVELKEKKDRVEDALNATRAAVEE-GIVPGGGVALLRASPALDKLKA-LNGDEK 434 (520)
T ss_pred HHHHHHHHHHHHhcCCeEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHhc-CCCcCCcHHHHHHHHHHHHhcc-CChHHH
Confidence 59999999999999999999999999999999987 5999999999999999999988 899999
Q ss_pred HHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q 009718 429 HAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEM 508 (527)
Q Consensus 429 ~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~ 508 (527)
+++++|++||+.||++|++|||+|+.+++++|+..|. ++|+|+.+|++.||++.|||||+.+|.++|+.|+++|++
T Consensus 435 ~~~~~~a~Al~~ip~~La~NaG~d~~~vi~~l~~~~~----~~G~d~~~g~~~d~~~~gV~Dp~~vk~~~l~~A~~~a~~ 510 (520)
T cd03344 435 LGIEIVRRALEAPLRQIAENAGVDGSVVVEKVLESPD----GFGYDAATGEYVDMIEAGIIDPTKVVRSALQNAASVASL 510 (520)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhcC----CEeEECCCCcccchHhccCeecHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988763 799999999999999999999999999999999999999
Q ss_pred HHhHhHHhh
Q 009718 509 ILRVDEIIT 517 (527)
Q Consensus 509 iL~iD~iI~ 517 (527)
||+||.+|.
T Consensus 511 iL~id~~i~ 519 (520)
T cd03344 511 LLTTEALVV 519 (520)
T ss_pred HHhhheEEe
Confidence 999999875
No 32
>PRK12850 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.2e-88 Score=726.83 Aligned_cols=461 Identities=22% Similarity=0.348 Sum_probs=415.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChH----HHHHHHHHhhhhc
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPA----AKVLVDISKVQDD 88 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~----a~ll~~~~~~~~~ 88 (527)
...|++++..|++|++.++++++|||||+|++|||+++. |+++|||||+||+++|+++||+ ++|++++|++|++
T Consensus 6 ~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~--G~~~ITnDG~tIlk~i~i~hp~~~~ga~ll~~~a~~qd~ 83 (544)
T PRK12850 6 IRFSTDARDRLLRGVNILANAVKVTLGPKGRNVVLEKSF--GAPRITKDGVTVAKEIELEDKFENMGAQMVKEVASKTND 83 (544)
T ss_pred ecccHHHHHHHHHHHHHHHHHHhCCcCCCCCCEEEECCC--CCeeEeccHHHHHHHhcCCChhhhHHHHHHHHHHhhhcc
Confidence 456789999999999999999999999999999999997 9999999999999999999999 9999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccc
Q 009718 89 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILS 168 (527)
Q Consensus 89 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~ 168 (527)
++||||||+++|+++||+++.+|+++|+||..|++||+.|++.++++|+++++|++. .+.|.++++++++
T Consensus 84 e~GDGTTt~viLa~~LL~~a~~li~~GihP~~I~~G~~~a~~~~~~~L~~~s~~v~~-----~~~l~~va~~s~~----- 153 (544)
T PRK12850 84 LAGDGTTTATVLAQAIVREGAKLVAAGMNPMDLKRGIDLAVAAVVDELKKIAKKVTS-----SKEIAQVATISAN----- 153 (544)
T ss_pred hhcCCcchHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhccCCCC-----HHHHHHHHHHhcC-----
Confidence 999999999999999999999999999999999999999999999999999998863 3679999988754
Q ss_pred hhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCC-C-------CCccccCcceEEeeeccc
Q 009718 169 QDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-G-------QPKRIENAKILVANTAMD 240 (527)
Q Consensus 169 ~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~-~-------~~~~~~n~~Ill~~~~Le 240 (527)
.++.+++++++|+..++.++.+ .++..+..| .++++++|++|++++.+ . +|..++||+|+++|+.+
T Consensus 154 -~~~~l~~lv~eAv~~vg~~g~i-~v~~~~~~g---~~~~~v~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i- 227 (544)
T PRK12850 154 -GDESIGEMIAEAMDKVGKEGVI-TVEEAKTLG---TELDVVEGMQFDRGYLSPYFVTNPEKMRAELEDPYILLHEKKI- 227 (544)
T ss_pred -CHHHHHHHHHHHHHHhcccCce-eeEEccccC---cceEEEEeEEecCccCcCccccccccCeEEEeCCEEEEEeccc-
Confidence 3789999999999999765321 122222222 68999999999988753 2 48889999999999743
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCC------eEEec-----
Q 009718 241 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGI------LAIEH----- 309 (527)
Q Consensus 241 ~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I------~~i~~----- 309 (527)
++.++ +..+++.+.+.++++|+++++|+|.++++|..++| +++++
T Consensus 228 -------------~~~~~-----------i~~~l~~i~~~g~~lvI~~~~I~d~al~~l~~n~i~~~~~~~avk~p~~g~ 283 (544)
T PRK12850 228 -------------SNLQD-----------LLPILEAVVQSGRPLLIIAEDVEGEALATLVVNKLRGGLKSVAVKAPGFGD 283 (544)
T ss_pred -------------CCHHH-----------HHHHHHHHHHhCCCEEEECCCCChHHHHHHHHcCCcccceEEEEeCCCcCc
Confidence 22222 55678889999999999999999999999999999 99887
Q ss_pred CChhhHHHHHHHhCCcccc-----ccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCC---------------------
Q 009718 310 ADFDGIERLALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG--------------------- 363 (527)
Q Consensus 310 v~~~~L~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~--------------------- 363 (527)
+++++|+|||.+|||++++ +++++++.++|+|+.|++.. ++|++|++|.++
T Consensus 284 ~~~~~le~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~~v~~~~---~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~ 360 (544)
T PRK12850 284 RRKAMLEDIAVLTGGQVISEDLGIKLENVTLDMLGRAKRVLITK---ENTTIIDGAGDKKNIEARVKQIRAQIEETTSDY 360 (544)
T ss_pred ccHHHHHHHHHHhCCEEeccccCCCcccCCHHHcCCCcEEEEEe---eeEEEEeCCCCHHHHHHHHHHHHHHHHhcccHH
Confidence 8899999999999999999 68888888999999998554 889999988764
Q ss_pred --------------ceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhHH
Q 009718 364 --------------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSH 429 (527)
Q Consensus 364 --------------~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~ 429 (527)
+.+||+|||+|+.+++|++|+++||++++|+++++ ++|||||++|++++..|+++ ...++++|+
T Consensus 361 ~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl~~~k~a~~~-g~VpGGGa~e~~~s~~L~~~-~~~~~~~~~ 438 (544)
T PRK12850 361 DREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALHATRAAVEE-GIVPGGGVALLRARSALRGL-KGANADETA 438 (544)
T ss_pred HHHHHHHHHHHhcCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhc-CCccCCcHHHHHHHHHHHhc-cCCChHHHH
Confidence 48999999999999999999999999999999987 79999999999999999998 677899999
Q ss_pred HHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHH
Q 009718 430 AIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMI 509 (527)
Q Consensus 430 ~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~i 509 (527)
++++|++||+.|||+||+|||+|+.+++.+|+..| .++|+|+.+|++.||++.|||||+.||.++|+.|+++|++|
T Consensus 439 ~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~----~~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~i 514 (544)
T PRK12850 439 GIDIVRRALEEPLRQIATNAGFEGSVVVGKVAELP----GNFGFNAQTGEYGDMVEAGIIDPAKVTRTALQDAASIAALL 514 (544)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhC----CCcceeCCCCcccchhhccCcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998764 46899999999999999999999999999999999999999
Q ss_pred HhHhHHhhcCCCCCC
Q 009718 510 LRVDEIITCAPRRRE 524 (527)
Q Consensus 510 L~iD~iI~~~~~~~~ 524 (527)
|+||++|..+|++.+
T Consensus 515 L~id~iI~~~~~~~~ 529 (544)
T PRK12850 515 ITTEAMVAEAPKKAA 529 (544)
T ss_pred HhHHHhhccCCCCCC
Confidence 999999999886533
No 33
>PRK12852 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.5e-88 Score=727.76 Aligned_cols=459 Identities=21% Similarity=0.332 Sum_probs=415.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccc----cChHHHHHHHHHhhhhc
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHI----DNPAAKVLVDISKVQDD 88 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~----~hP~a~ll~~~~~~~~~ 88 (527)
...|++++..|++|+..++++|+|||||+||+|||+++. |+++|||||+||+++|++ +||+|+|+++++++|++
T Consensus 6 ~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~--g~~~iTnDG~TIlk~i~~~~~~~~p~akll~e~a~~q~~ 83 (545)
T PRK12852 6 VKFSGDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSF--GAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTND 83 (545)
T ss_pred hhccHHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCC--CCeeEeccHHHHHHHccCCCcccChHHHHHHHHHhhcCc
Confidence 556789999999999999999999999999999999997 999999999999999999 59999999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccc
Q 009718 89 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILS 168 (527)
Q Consensus 89 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~ 168 (527)
++||||||+++||++||+++.+|+++|+||..|++||+.|++.+++.|+++++|++.. +++.++++++.+
T Consensus 84 e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~~~-----~~l~~va~~s~~----- 153 (545)
T PRK12852 84 LAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDIAVAAVVKDIEKRAKPVASS-----AEIAQVGTISAN----- 153 (545)
T ss_pred eecCCcchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCH-----HHHHHHHhhhcC-----
Confidence 9999999999999999999999999999999999999999999999999999998643 568999887653
Q ss_pred hhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCC-CCceeeeeEEEeccCCC--------CCCccccCcceEEeeecc
Q 009718 169 QDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSL-KDSFLDEGFILDKKIGI--------GQPKRIENAKILVANTAM 239 (527)
Q Consensus 169 ~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~-~dS~l~~Givl~~~~~~--------~~~~~~~n~~Ill~~~~L 239 (527)
.++.+++++++|+.+++.++. |.+. .|+.. .+|++++|++|++++.+ .||..++||+|+++++.
T Consensus 154 -~~~~l~~li~eA~~~vg~~g~---i~v~--~g~~~~~~~~~v~G~~~~~g~~~p~~v~~~~~~~~~l~n~~Ili~d~~- 226 (545)
T PRK12852 154 -GDAAIGKMIAQAMQKVGNEGV---ITVE--ENKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTVELDDAYILLHEKK- 226 (545)
T ss_pred -ChHHHHHHHHHHHHHhccCCc---eeee--cCCCcceEEEEEEeEEecCCccCCccccccccceEEecCceEEEecCc-
Confidence 378999999999999976542 3343 47775 78999999999999753 27788999999999753
Q ss_pred ccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHc------CCeEEecCC--
Q 009718 240 DTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIEHAD-- 311 (527)
Q Consensus 240 e~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~------~I~~i~~v~-- 311 (527)
+++++ .+..+++.+.+.++++|+++++|++.++++|..+ +|+++++.+
T Consensus 227 -------------i~~~~-----------~i~~~l~~i~~~g~~lvI~~~~i~~~al~~l~~nk~~~~~~i~av~~~~~~ 282 (545)
T PRK12852 227 -------------LSGLQ-----------AMLPVLEAVVQSGKPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFG 282 (545)
T ss_pred -------------cCCHH-----------HHHHHHHHHHHhCcCEEEECCCCcHHHHHHHHHhcccccceEEEEecCCcc
Confidence 23333 3445678889999999999999999999999886 799999766
Q ss_pred ---hhhHHHHHHHhCCcccc-----ccCCCCCCCCcccceEEEEEEcCeEEEEEecCCC---------------------
Q 009718 312 ---FDGIERLALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEM--------------------- 362 (527)
Q Consensus 312 ---~~~L~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~--------------------- 362 (527)
+++|+|||.+|||++++ +++++++.++|+|+.+++.. ++++++.++..
T Consensus 283 ~~r~~~l~~ia~~tGa~~i~~~~~~~l~~~~~~~lG~~~~v~~~~---~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~ 359 (545)
T PRK12852 283 DRRKAMLEDIAILTGGQLISEDLGIKLENVTLKMLGRAKKVVIDK---ENTTIVNGAGKKADIEARVGQIKAQIEETTSD 359 (545)
T ss_pred cchHhHHHHHHHhcCCEEEecCcCCCcCCCCHHHCCCCcEEEEEc---cEEEEEeCCCCHHHHHHHHHHHHHHHHhcccH
Confidence 88999999999999999 68889888999999998655 78889988765
Q ss_pred --------------CceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhH
Q 009718 363 --------------GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKS 428 (527)
Q Consensus 363 --------------~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~ 428 (527)
++++||+|||+|+.+++|++|+++||++++|+++++ ++|||||++|++++.+|++++.. ++++|
T Consensus 360 ~~~~~l~~R~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl~a~~~a~~~-g~VpGGGa~e~~~s~~L~~~~~~-~~~~q 437 (545)
T PRK12852 360 YDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQE-GIVPGGGVALLRAKKAVGRINND-NADVQ 437 (545)
T ss_pred HHHHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCcCchHHHHHHHHHHHHhhcC-CcHHH
Confidence 378999999999999999999999999999999987 69999999999999999999877 78999
Q ss_pred HHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q 009718 429 HAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEM 508 (527)
Q Consensus 429 ~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~ 508 (527)
+++++|++||+.|||+||+|||+|+.+++++|++.| ++++|||+.+|++.||++.|||||+.||.++|+.|+|+|++
T Consensus 438 ~~i~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~---~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~ 514 (545)
T PRK12852 438 AGINIVLKALEAPIRQIAENAGVEGSIVVGKILENK---SETFGFDAQTEEYVDMVAKGIIDPAKVVRTALQDAASVAGL 514 (545)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc---CCCeeEeCcCCCcccHHhCcCCcChHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998876 46799999999999999999999999999999999999999
Q ss_pred HHhHhHHhhcCCCC
Q 009718 509 ILRVDEIITCAPRR 522 (527)
Q Consensus 509 iL~iD~iI~~~~~~ 522 (527)
||+||++|..+|++
T Consensus 515 iL~id~iI~~~~~~ 528 (545)
T PRK12852 515 LVTTEAMVAELPKK 528 (545)
T ss_pred HHhHHHHhhcCCCC
Confidence 99999999988865
No 34
>KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.6e-91 Score=681.93 Aligned_cols=508 Identities=39% Similarity=0.577 Sum_probs=474.7
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhccc
Q 009718 11 ANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEV 90 (527)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~ 90 (527)
.+...|+.+|..|..|+.++++++++||||-|++||++++. |++.+||||+|||+.+.++||++|+|++.++.|++++
T Consensus 12 ge~~sg~~vr~qnv~a~~~i~nivkss~GPvGldKmlvdd~--Gdvt~TndgAtiL~~l~V~HPa~KiLvelaq~qd~ev 89 (545)
T KOG0360|consen 12 GERLSGERVRTQNVMAAMAIANIVKSSLGPVGLDKMLVDDI--GDVTITNDGATILSLLEVEHPAAKVLVELAQLQDEEV 89 (545)
T ss_pred CCcccchhhhhhhhHHHHHHHHHHHhccCccchhhhccccc--cceEEeccHHHHHHhhhhcchHHHHHHHHHHhccccc
Confidence 34678999999999999999999999999999999999997 9999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhh-cccccCCchhhhHHHHHHHHHHhhcccccch
Q 009718 91 GDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQ-KVVDNKENAETFKSDLMKIAMTTLSSKILSQ 169 (527)
Q Consensus 91 GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~~ 169 (527)
|||||++++++++|++++.+|+..++||+.|++||+.|...+++++.+ ++.|++.- ....|.++++|+++||++..
T Consensus 90 gDgttsvviia~eLl~~a~~Lv~~~ihpt~ii~gyr~ac~e~~k~i~~~~~~~vd~l---g~~~Lin~~ktsmsSK~i~~ 166 (545)
T KOG0360|consen 90 GDGTTSVVIIAAELLKNADELVKTKIHPTRIISGYRLACIEAVKYITEGLSKPVDSL---GTQILINLAKTSMSSKIIGM 166 (545)
T ss_pred cCCceEEEEEEHHhhhhHHHhhcCCCcceehhhhHHHHHHHHHHHhhccceeehhhc---chHHHHHHHHhhhcceeccc
Confidence 999999999999999999999999999999999999999999999975 56665532 24689999999999999999
Q ss_pred hhhHHHHHHHHHHHhhc-----c--CCCcccceeEEeCCCCCCCceeeeeEEEeccC-CCCCCccccCcceEEeeecccc
Q 009718 170 DKEHFGQLAVDAVMRLK-----G--STNLESIQIIKKPGGSLKDSFLDEGFILDKKI-GIGQPKRIENAKILVANTAMDT 241 (527)
Q Consensus 170 ~~~~l~~li~~a~~~~~-----~--~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~-~~~~~~~~~n~~Ill~~~~Le~ 241 (527)
..++|++++++|+..+. + ...++.++|.+..|.+.-+|.+++|+.+++.. +..||..++|+||+++++.|..
T Consensus 167 ds~~f~~~Vvda~l~v~~~~~~ge~~ypi~~vnILkahG~s~~eS~l~~GyaLnc~~asq~m~~~i~~~Kiacld~~Lqk 246 (545)
T KOG0360|consen 167 DSDFFTEMVVDALLAVKILDINGEPHYPINSVNILKAHGKSQIESMLLPGYALNCSVASQMMPLRIKNAKIACLDFTLQK 246 (545)
T ss_pred chHHHHHHHHHHHHHHhhcccCCceeccccceeEEecCCccchhheeecceeeeccHhhhccccccccceeeeEeccccc
Confidence 99999999999998763 1 23467889999999999999999999999885 4568999999999999999998
Q ss_pred ccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHH
Q 009718 242 DKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALV 321 (527)
Q Consensus 242 ~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~ 321 (527)
.+... +..+.+.++++++.+.+.|....++.+++|++.|+|+|+++++|||..++||.++|++++||+.+++|++|+++
T Consensus 247 ~km~l-Gv~vvv~dp~kle~ir~~e~~itkeRi~kIl~~ganvVLtt~gIddmc~K~~veagamAVrR~~k~dlk~iaka 325 (545)
T KOG0360|consen 247 TKMKL-GVQVVVDDPEKLEQIRQREQDITKERIKKILATGANVVLTTGGIDDMCLKYFVEAGAMAVRRCKKEDLKRIAKA 325 (545)
T ss_pred ccccc-cceEEEcChHHHHHHHHHHhHhHHHHHHHHHhcCCcEEEEcCCccHHHHHHHHHcchhhhHHHHHHHHHHHHHh
Confidence 77665 57889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCccccccCCC------CCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHH
Q 009718 322 TGGEIASTFDNP------ESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQT 395 (527)
Q Consensus 322 tGa~ii~~~~~l------~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~ 395 (527)
||+++++++.++ .+..+|+|+.|.+..|+++.++++.+.+.. .|+|+|||++++.++|++|++|||+|++|..
T Consensus 326 tGat~~sSla~l~geetf~~~~lG~a~evvqeri~dde~ilikg~ka~-~aSiILrgaNd~~~DEmers~hdaL~Vlkrt 404 (545)
T KOG0360|consen 326 TGATLLSSLANLEGEETFEPASLGSADEVVQERIGDDELILIKGTKAT-SASIILRGANDFMLDEMERSLHDALCVLKRT 404 (545)
T ss_pred hCCeeeehhhccccccccChhhccchhHHHHHhcccceeEEeccCccc-eeeEEEecCCcccHhhhccchhhHHHHHHHH
Confidence 999999998754 456699999999999999999999998866 9999999999999999999999999999999
Q ss_pred hhCCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhc--C------
Q 009718 396 VNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQK--E------ 467 (527)
Q Consensus 396 ~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~--~------ 467 (527)
++++++||||||+|.+|+-+|+.|+.+..+++|+++..|+.||.+||++|+.||+.|+.+.++++|+.|+. .
T Consensus 405 Les~~vvpGGG~vE~aLs~yle~~a~s~~srE~laiaefa~all~ipktla~naa~Dstelvt~lra~Hs~~q~~p~~~~ 484 (545)
T KOG0360|consen 405 LESKSVVPGGGAVETALSIYLENFATSVGSREQLAIAEFAAALLSIPKTLAVNAAKDSTELVTKLRAYHSVSQDNPWRLL 484 (545)
T ss_pred hccCccccCccHHHHHHHHHHHhhcccCccHHHHHHHHHHHHHhcchHHHhhhhccccccccccccCCchhhccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998842 2
Q ss_pred CCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCCC
Q 009718 468 GCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRED 525 (527)
Q Consensus 468 ~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~~ 525 (527)
-.|+|.|+.+|++.|.++.|+++|..+|...|+.|+|.+..+||||++|.-.|..+..
T Consensus 485 ~k~~GldL~ng~~~dn~~~g~~ep~~~kvksLk~ateaaitiLriD~li~l~~~~~~~ 542 (545)
T KOG0360|consen 485 LKQYGLDLINGKIRDNKSAGSFEPPIVKVKSLKFATEAAITILRIDDLIKLLPELQVA 542 (545)
T ss_pred chhhCccccccEeecceeeeeeccceeehhhhHHHHHhhhhhcchhhhhhcCcccccc
Confidence 2479999999999999999999999999999999999999999999999998877654
No 35
>TIGR02348 GroEL chaperonin GroL. This family consists of GroEL, the larger subunit of the GroEL/GroES cytosolic chaperonin. It is found in bacteria, organelles derived from bacteria, and occasionally in the Archaea. The bacterial GroEL/GroES group I chaperonin is replaced a group II chaperonin, usually called the thermosome in the Archaeota and CCT (chaperone-containing TCP) in the Eukaryota. GroEL, thermosome subunits, and CCT subunits all fall under the scope of Pfam model pfam00118.
Probab=100.00 E-value=3.4e-88 Score=721.89 Aligned_cols=456 Identities=25% Similarity=0.360 Sum_probs=413.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccCh----HHHHHHHHHhhhhc
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDD 88 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~ 88 (527)
...|++++.+|++|++.++++++|||||+|++|||+++. |+++|||||+||+++|++.|| +++|++++|++|++
T Consensus 4 ~~~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmi~~~~--g~~~iTnDG~tIlk~i~~~hp~~~~~akll~~~a~~qd~ 81 (524)
T TIGR02348 4 IKFDEEARKALLRGVDKLADAVKVTLGPKGRNVVLEKSF--GAPTITKDGVTVAKEIELEDKFENMGAQLVKEVASKTND 81 (524)
T ss_pred ccccHHHHHHHHHHHHHHHHHhccCcCCCCCcEEEECCC--CCeeEeccHHHHHHHccCCChhhHHHHHHHHHHHHccCc
Confidence 456889999999999999999999999999999999997 999999999999999999999 99999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccc
Q 009718 89 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILS 168 (527)
Q Consensus 89 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~ 168 (527)
++||||||+++|+++||+++.+|+++|+||..|++||+.|++.+++.|+++++|++. .+.|.++++|+.
T Consensus 82 e~GDGTTtvviLa~~Ll~~a~~li~~GihP~~Ii~G~~~A~~~~l~~L~~~s~~~~~-----~~~l~~va~ts~------ 150 (524)
T TIGR02348 82 VAGDGTTTATVLAQAIVKEGLKNVAAGANPIELKRGIEKAVEAAVEELKKLSKPVKG-----KKEIAQVATISA------ 150 (524)
T ss_pred eeCCCcchHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCC-----HHHHHHHHHHhc------
Confidence 999999999999999999999999999999999999999999999999999999863 368999998764
Q ss_pred hhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCC-CCceeeeeEEEeccCCCC--------CCccccCcceEEeeecc
Q 009718 169 QDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSL-KDSFLDEGFILDKKIGIG--------QPKRIENAKILVANTAM 239 (527)
Q Consensus 169 ~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~-~dS~l~~Givl~~~~~~~--------~~~~~~n~~Ill~~~~L 239 (527)
++++++++++++|+..++.+.. |.|. .|+.. ++|++++|++|++++.+. +|+.++||+|+++++.+
T Consensus 151 ~~~~~l~~lv~~A~~~v~~~~~---i~v~--~g~~~~~~s~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i 225 (524)
T TIGR02348 151 NNDEEIGSLIAEAMEKVGKDGV---ITVE--ESKSLETELEVVEGMQFDRGYISPYFVTDAEKMEVELENPYILITDKKI 225 (524)
T ss_pred cChHHHHHHHHHHHHHhCcCCc---Eeee--cCCCccccEEEEEeEEEcCCCCCcccccCccCCeEEeeCceeeeccCCc
Confidence 4689999999999999976543 3443 36666 679999999999997532 47889999999998743
Q ss_pred ccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHc------CCeEEecCCh-
Q 009718 240 DTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIEHADF- 312 (527)
Q Consensus 240 e~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~------~I~~i~~v~~- 312 (527)
++++++ ..+++.+.+.++++|+++++|++.++++|..+ +|++++++++
T Consensus 226 --------------~~~~~i-----------~~~l~~i~~~g~~lvi~~~~i~~~al~~l~~n~~~~~~~i~avr~~~~~ 280 (524)
T TIGR02348 226 --------------SNIKDL-----------LPLLEKVAQSGKPLLIIAEDVEGEALATLVVNKLRGTLNVCAVKAPGFG 280 (524)
T ss_pred --------------CCHHHH-----------HHHHHHHHHhCcCEEEECCCCChHHHHHHHHhhcccccceEEEECCCcc
Confidence 344443 45688899999999999999999999999887 8899998865
Q ss_pred ----hhHHHHHHHhCCcccc-----ccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCc-------------------
Q 009718 313 ----DGIERLALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQ------------------- 364 (527)
Q Consensus 313 ----~~L~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~------------------- 364 (527)
++|+|||.+|||++++ +++++++.++|+|+.|++. .+++++++++..++
T Consensus 281 ~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~~v~~~---~~~~~~i~~~~~~~~~~~ri~~l~~~~~~~~~~ 357 (524)
T TIGR02348 281 DRRKAMLEDIAILTGGQVISEELGLKLEEVTLDDLGKAKKVTVD---KDNTTIVEGAGDKAAIKARVAQIKAQIEETTSD 357 (524)
T ss_pred chhhhhHHHHHHHhCCEEecccccCCcCcCCHHHCCCceEEEEe---ecEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCH
Confidence 7999999999999999 8999999999999999854 37889998876543
Q ss_pred ----------------eeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhH
Q 009718 365 ----------------ACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKS 428 (527)
Q Consensus 365 ----------------~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~ 428 (527)
.+||+|||+|+.+++|++|+++||++++|+++++ ++|||||++|+++|.+|++ +...+++++
T Consensus 358 ~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~Dal~~~r~a~~~-g~VpGGGa~e~~~s~~L~~-~~~~~~~~~ 435 (524)
T TIGR02348 358 YDREKLQERLAKLAGGVAVIKVGAATETEMKEKKLRVEDALNATRAAVEE-GIVPGGGVALLRAAAALEG-LKGDNEDEA 435 (524)
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCccCCcHHHHHHHHHHHH-hccCChHHH
Confidence 6899999999999999999999999999999987 5999999999999999998 777889999
Q ss_pred HHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q 009718 429 HAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEM 508 (527)
Q Consensus 429 ~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~ 508 (527)
+++++|++||+.|||+|++|||+|+.+++++|+.. .+ ++|||+.+|++.||++.|||||+.||.++|+.|+++|++
T Consensus 436 ~~~~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~--~~--~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~ 511 (524)
T TIGR02348 436 IGIDIVKRALEAPLRQIAENAGKDGAVVAEKVKES--KG--NFGFNAATGEYEDLVEAGIIDPTKVTRSALQNAASIAGL 511 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhc--CC--CeeEeCcCCcccchhhccCEEcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999864 23 489999999999999999999999999999999999999
Q ss_pred HHhHhHHhhcCC
Q 009718 509 ILRVDEIITCAP 520 (527)
Q Consensus 509 iL~iD~iI~~~~ 520 (527)
||+||++|...|
T Consensus 512 iL~id~ii~~~~ 523 (524)
T TIGR02348 512 LLTTEAVVADKP 523 (524)
T ss_pred HHhHHHHhhcCC
Confidence 999999998755
No 36
>KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-90 Score=674.85 Aligned_cols=513 Identities=29% Similarity=0.456 Sum_probs=487.9
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
.++.++..+.|..++..|++|+++++++++||+||+.|.||+.++. |.+..||||..||+++++.||+|+-+.+++.+
T Consensus 7 ~~~~~~~re~g~kvq~~ni~aak~iadvirtclgp~am~kmlld~~--g~i~~tndg~ailrei~Vahpaaksmiel~rt 84 (527)
T KOG0364|consen 7 VLSKNTKRESGRKVQLGNIQAAKAIADVIRTCLGPRAMLKMLLDPM--GGIVLTNDGNAILREIDVAHPAAKSMIELSRT 84 (527)
T ss_pred ecccccCcCccccccccchhhHHHHHHHHHHhcChHHHHHHhhccC--CceEEecCcHHHHHHHhhcCcchhhHhhhhhc
Confidence 4567778889999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
||+++||||||+++|++++|.++..++++|+||..|+++|.+|++.++..++++++|++.++ ...++.++++++.+|
T Consensus 85 qdeevgdgttsvi~lagE~L~~~~~~l~~~~Hp~~i~ka~~~aled~~~~~~~~~~~~d~~~---~~km~~vi~~~v~tk 161 (527)
T KOG0364|consen 85 QDEEVGDGTTSVIILAGEMLNVAEPFLEEGIHPTVIIKAYIKALEDNIRALDKISIPVDVKD---QAKMLRVINSSVGTK 161 (527)
T ss_pred ccccccCCceeeeeehHHHhhhcchhhhcCcchHHHHHHHHHHHHHHHHHHHhhcccCCccc---HHHHHhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999988653 357889999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhccC----CCc-ccceeEEeCCCCCCCceeeeeEEEeccCCCC-CCccccCcceEEeeecc
Q 009718 166 ILSQDKEHFGQLAVDAVMRLKGS----TNL-ESIQIIKKPGGSLKDSFLDEGFILDKKIGIG-QPKRIENAKILVANTAM 239 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~~~----~~~-~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~-~~~~~~n~~Ill~~~~L 239 (527)
+.+.|.+.++++..+|+.+++.+ +++ .+.++.|++||.+++|++++|+.+.++..+. |.+.++||||++++|||
T Consensus 162 ~~~~~~~~~~~lal~avk~V~~~~g~e~dik~y~kveKvpgg~l~~s~vl~Gv~~nkdv~Hpkmrr~IenprivLlD~~L 241 (527)
T KOG0364|consen 162 FNSRWSDLICNLALDAVKTVGVENGREIDIKRYAKVEKVPGGLLEDSCVLKGVMINKDVTHPKMRRAIENPRIVLLDCPL 241 (527)
T ss_pred hhhhhcchhhhHHHHHHHHhhhccCceechhhhccccccCcccccccceecceeeccccCcHHHHHHhhcCcEEEecCCc
Confidence 99999999999999999998653 555 4888999999999999999999999997665 88999999999999999
Q ss_pred ccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHH
Q 009718 240 DTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLA 319 (527)
Q Consensus 240 e~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la 319 (527)
+|.+.+.. +++.+.-.+++....+.|+++++.++.+|+...+++|++.+|++|.+++||.+.||++++|+++.|-.|++
T Consensus 242 eykkGeSq-tnve~~~eed~~r~Lqieee~v~~mc~~Ii~v~pDlVitekG~sdla~hyl~k~~iT~~rr~rKtDn~ria 320 (527)
T KOG0364|consen 242 EYKKGESQ-TNVEIVKEEDFTRILQIEEEQVQAMCEVIIAVKPDLVITEKGVSDLAQHYLLKANITAIRRLRKTDNNRIA 320 (527)
T ss_pred cCCCCccc-cceeeeechhHHHHHHhhHHHHHHHHHHHHeecccEEEeccchhHHHHHHHHhcCchhhhhhhccccchhh
Confidence 99988774 77888888889998889999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCccccccCCCCCCCCc-ccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhC
Q 009718 320 LVTGGEIASTFDNPESVKLG-HCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVND 398 (527)
Q Consensus 320 ~~tGa~ii~~~~~l~~~~lG-~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~ 398 (527)
++|||+++++.+++.+.+.| .|+.++...+|+++|+||..|+.|+.|||++|||++.+++|.+|.+.||+.+.|+.+.+
T Consensus 321 ~acga~iv~rpedl~e~dvGt~agLf~~kK~gdeyf~f~~~Ck~pkaCtillrg~skdil~e~ernlqda~~varn~ii~ 400 (527)
T KOG0364|consen 321 RACGARIVNRPEDLPERDVGTGAGLFEVKKIGDEYFTFFTDCKEPKACTILLRGPSKDILNEVERNLQDAMGVARNVIIN 400 (527)
T ss_pred hhcCceeccChhhCchhccCcccceeeeeccCchhhhhhhhcCCCcceEEEeccCchhHHHHHHHHhhhHHHHHHHhccC
Confidence 99999999999999999999 48899999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCC
Q 009718 399 SRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG 478 (527)
Q Consensus 399 ~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g 478 (527)
|+++||||++||.+|+.|++.+...++-++..+.+.|.|||.+||+|++|||.++...++.+++.|..|...+|+|.++|
T Consensus 401 PklvPGGGAtEMAvs~~L~qksa~~~GVekwPY~Ava~AlEviPrtliqncGan~Ir~lTalr~kh~~G~~~~gi~g~tg 480 (527)
T KOG0364|consen 401 PKLVPGGGATEMAVSHELRQKSALMTGVEKWPYGAVAGALEVIPRTLIQNCGANPIRALTALRAKHKEGQRVWGIDGETG 480 (527)
T ss_pred CcccCCccHHHHHHHHHHHHHHhhccchhccchhhhhcCceeccHHHHhhcCccHHHHHHHHHHHhcCcceeecccCcee
Confidence 99999999999999999999898999999999999999999999999999999999999999999988888899999999
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCC
Q 009718 479 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRE 524 (527)
Q Consensus 479 ~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~ 524 (527)
.++||.+.++|||..+|.+..++|++.++++||||+++....++.+
T Consensus 481 ~iVDm~~~~iwep~~vK~Q~~ktavesa~~LLRIddIvsg~kk~v~ 526 (527)
T KOG0364|consen 481 VIVDMVELGIWEPEAVKLQTGKTAVESACLLLRIDDIVSGKKKRVE 526 (527)
T ss_pred eEeeeeeccccchhhhhhhhhhHHHHHHHHHHhhhceeeeeeeccC
Confidence 9999999999999999999999999999999999999998776654
No 37
>CHL00093 groEL chaperonin GroEL
Probab=100.00 E-value=6.2e-87 Score=712.94 Aligned_cols=460 Identities=21% Similarity=0.308 Sum_probs=407.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHH----HHHHHHHhhhhc
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAA----KVLVDISKVQDD 88 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a----~ll~~~~~~~~~ 88 (527)
...|+++|++.++||..++++|+|||||+||+|||+++. |+++|||||+||+++|+++||++ +|+++++.+|++
T Consensus 5 ~~~~~~~~~~~~~g~~~la~~v~tTlGP~G~~kmi~~~~--g~~~ITnDG~tIlk~i~~~hp~a~~g~~li~~~a~~~~~ 82 (529)
T CHL00093 5 ILYQDNARRALERGMDILAEAVSVTLGPKGRNVVLEKKY--GSPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTND 82 (529)
T ss_pred eecCHHHHHHHHHHHHHHHHHHhcccCCCCCcEEEECCC--CCeeEeccHHHHHHHccCcCHHHHHHHHHHHHHHHhcCc
Confidence 456789999999999999999999999999999999987 99999999999999999999999 488889999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccc
Q 009718 89 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILS 168 (527)
Q Consensus 89 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~ 168 (527)
++||||||+++|+++||+++.+|+++|+||..|++||+.|.+.+++.|+++++|++. .+.|.++++++.+
T Consensus 83 e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~d-----~~~L~~VA~ts~~----- 152 (529)
T CHL00093 83 VAGDGTTTATVLAYAIVKQGMKNVAAGANPISLKRGIEKATQYVVSQIAEYARPVED-----IQAITQVASISAG----- 152 (529)
T ss_pred eecCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCC-----HHHHHHHHHHhcc-----
Confidence 999999999999999999999999999999999999999999999999999999863 3679999988653
Q ss_pred hhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCCC----CCc----cccCcceEEeeeccc
Q 009718 169 QDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIG----QPK----RIENAKILVANTAMD 240 (527)
Q Consensus 169 ~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~----~~~----~~~n~~Ill~~~~Le 240 (527)
+++.|++|+++|+..+++++. |.+. ..++...++++++|++|+++|.+. +|+ .++||+|++++++|+
T Consensus 153 -~~~~l~~lv~eAv~~vg~~g~---i~~~-~g~~~~~~~~~v~G~~~~~g~~~p~fv~~~k~~~~~l~n~~Ili~d~~le 227 (529)
T CHL00093 153 -NDEEVGSMIADAIEKVGREGV---ISLE-EGKSTVTELEITEGMRFEKGFISPYFVTDTERMEVVQENPYILLTDKKIT 227 (529)
T ss_pred -ChHHHHHHHHHHHHHhccCCc---eeec-CCCccceeeEEEeeEEecCccCcCccccCCccceEEecCceehhhcCCCC
Confidence 789999999999999976543 2231 122345677999999999997532 244 589999999999987
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHH--HHHHH----cCCeEEecCCh--
Q 009718 241 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPE--ELFAD----AGILAIEHADF-- 312 (527)
Q Consensus 241 ~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~--~~l~~----~~I~~i~~v~~-- 312 (527)
+.+ ..+...++.+.+.++++++++++|++.++ .|+++ .+|++++++++
T Consensus 228 ~~~------------------------~~i~~~l~~i~~~~~~lvi~~~~i~~~al~~l~l~k~~g~~~i~avr~~~~~~ 283 (529)
T CHL00093 228 LVQ------------------------QDLLPILEQVTKTKRPLLIIAEDVEKEALATLVLNKLRGIVNVVAVRAPGFGD 283 (529)
T ss_pred chH------------------------HHHHHHHHHHHhcCCCEEEEcCCCChHHHHHHHHhhhcccceEEEEecCCCCc
Confidence 532 11456778888999999999999998444 55577 59999999855
Q ss_pred ---hhHHHHHHHhCCcccc-----ccCCCCCCCCcccceEEEEEEcCeEEEEEec---------CCC-------------
Q 009718 313 ---DGIERLALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSG---------VEM------------- 362 (527)
Q Consensus 313 ---~~L~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~---------~~~------------- 362 (527)
++|+|||.+|||++++ +++++++.++|+|+.+++.. +++++|++ |..
T Consensus 284 ~~k~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~~~~v~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 360 (529)
T CHL00093 284 RRKAMLEDIAILTGGQVITEDAGLSLETIQLDLLGQARRIIVTK---DSTTIIADGNEEQVKARCEQLRKQIEIADSSYE 360 (529)
T ss_pred chHHHHHHHHHhhCCEEecccccCCcCCCCHHHCCcceEEEEec---CEEEEEecCcHHHHHHHHHHHHHHhhhcCCHHH
Confidence 7899999999999999 78999988999999999653 78888873 221
Q ss_pred ------------CceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHh-cCCChhHH
Q 009718 363 ------------GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELAR-KTPGKKSH 429 (527)
Q Consensus 363 ------------~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~-~~~~~~~~ 429 (527)
+..+||+|||+|+.+++|++|+++||++++|+++++ ++|||||++|+++|.+|++++. ..++++|+
T Consensus 361 ~~~l~eR~~~l~g~~~~I~irg~t~~~l~E~er~i~DAl~a~r~a~~~-gvVpGGGa~e~~~s~~L~~~~~~~~~g~~~~ 439 (529)
T CHL00093 361 KEKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEE-GIVPGGGATLVHLSENLKTWAKNNLKEDELI 439 (529)
T ss_pred HHHHHHHHHHhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHHc-CcccCCcHHHHHHHHHHHHHhccCCChHHHH
Confidence 148889999999999999999999999999999987 6999999999999999999987 78999999
Q ss_pred HHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHH
Q 009718 430 AIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMI 509 (527)
Q Consensus 430 ~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~i 509 (527)
++++|++||+.||++||+|||+|+.+++++++.. +.++|||+.+|+++||++.|||||+.||.++|+.|+|+|++|
T Consensus 440 ~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~----~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~i 515 (529)
T CHL00093 440 GALIVARAILAPLKRIAENAGKNGSVIIEKVQEQ----DFEIGYNAANNKFVNMYEAGIIDPAKVTRSALQNAASIASMI 515 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHcc----CCCEeEECCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999753 457999999999999999999999999999999999999999
Q ss_pred HhHhHHhhcCCC
Q 009718 510 LRVDEIITCAPR 521 (527)
Q Consensus 510 L~iD~iI~~~~~ 521 (527)
|+||++|...|+
T Consensus 516 L~id~ii~~~~~ 527 (529)
T CHL00093 516 LTTECIIVDKKE 527 (529)
T ss_pred HHHHHHHHcCCC
Confidence 999999999774
No 38
>PRK14104 chaperonin GroEL; Provisional
Probab=100.00 E-value=5.2e-86 Score=705.82 Aligned_cols=461 Identities=22% Similarity=0.356 Sum_probs=413.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhcccc----ChHHHHHHHHHhhhhc
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHID----NPAAKVLVDISKVQDD 88 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~----hP~a~ll~~~~~~~~~ 88 (527)
...|.+++..|++|+..++++|+|||||+|++|||+++. |+++|||||+||++++++. ||+++|++++|++|++
T Consensus 6 ~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~k~i~~~~--g~~~iTnDG~tIlk~i~~~d~~~~pgakll~e~a~~qd~ 83 (546)
T PRK14104 6 VKFGVDARDRMLRGVDILANAVKVTLGPKGRNVVLDKSF--GAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKSAD 83 (546)
T ss_pred ecchHHHHHHHHHHHHHHHHHHhhccCCCCCceEEEcCC--CCeeEeccHHHHHHHhcCCCcccChHHHHHHHHHHhhcc
Confidence 567889999999999999999999999999999999986 9999999999999999998 9999999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccc
Q 009718 89 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILS 168 (527)
Q Consensus 89 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~ 168 (527)
++||||||+++||++||+++.+++++|+||..|++||+.|.+.+++.|+++++|++.+ +++.++++++.+
T Consensus 84 e~GDGTTTvvvLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~v~~~-----~~l~~va~~s~~----- 153 (546)
T PRK14104 84 AAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSN-----DEIAQVGTISAN----- 153 (546)
T ss_pred cccCcccHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHhcccCCCH-----HHHHHHHHHHhc-----
Confidence 9999999999999999999999999999999999999999999999999999998643 568899887654
Q ss_pred hhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCC-CCceeeeeEEEeccCCC--------CCCccccCcceEEeeecc
Q 009718 169 QDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSL-KDSFLDEGFILDKKIGI--------GQPKRIENAKILVANTAM 239 (527)
Q Consensus 169 ~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~-~dS~l~~Givl~~~~~~--------~~~~~~~n~~Ill~~~~L 239 (527)
+++.+++++++|+..++.++ .|.+. .++.. .++++++|++|++++.+ .++..+++|+|++++.
T Consensus 154 -~d~~i~~lv~~Av~~vg~~g---~i~v~--~~~~~~~~~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~~~~Ilv~d~-- 225 (546)
T PRK14104 154 -GDAEIGKFLADAMKKVGNEG---VITVE--EAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDDAYILINEK-- 225 (546)
T ss_pred -CchHHHHHHHHHHHHhccCC---ceeeE--ecccccceEEEEEEEEEeCCCCCcchhcCcccCceeeeCcEEEEehh--
Confidence 45789999999999997654 23343 23555 58999999999999742 1356688899998862
Q ss_pred ccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHH------cCCeEEecCC--
Q 009718 240 DTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFAD------AGILAIEHAD-- 311 (527)
Q Consensus 240 e~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~------~~I~~i~~v~-- 311 (527)
.++++++ +..+++.+.+.+++||+++++|++.++++|.. .+|+++++++
T Consensus 226 ------------~i~~~~~-----------i~~~l~~i~~~g~~lvI~~~~i~~~al~~l~~Nk~~~~~~i~av~~~~~g 282 (546)
T PRK14104 226 ------------KLSSLNE-----------LLPLLEAVVQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFG 282 (546)
T ss_pred ------------hhcCHHH-----------HHHHHHHHHHhCcCEEEECCCCcHHHHHHHHhCcccceeeEEEEeccCCC
Confidence 1344433 44568889999999999999999999999985 5789998877
Q ss_pred ---hhhHHHHHHHhCCccccc-----cCCCCCCCCcccceEEEEEEcCeEEEEEecCCCC--------------------
Q 009718 312 ---FDGIERLALVTGGEIAST-----FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG-------------------- 363 (527)
Q Consensus 312 ---~~~L~~la~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-------------------- 363 (527)
+++|+|||.+|||+++++ ++++++.++|+|+.++ +++++++++.+|..+
T Consensus 283 ~~r~~~l~~ia~~tG~~~i~~~~~~~l~~~~~~~LG~a~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~ 359 (546)
T PRK14104 283 DRRKAMLQDIAILTGGQAISEDLGIKLENVTLQMLGRAKKVM---IDKENTTIVNGAGKKADIEARVAQIKAQIEETTSD 359 (546)
T ss_pred cchHHHHHHHHHHhCCEEEecCCCCCcCcCCHHHCCceeEEE---EcCCEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCH
Confidence 789999999999999999 8899988999999988 688899999988764
Q ss_pred ---------------ceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhH
Q 009718 364 ---------------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKS 428 (527)
Q Consensus 364 ---------------~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~ 428 (527)
+++||+|||+|+.+++|++|+++||++++++++++ ++|||||++|++++..|+++. ..+++++
T Consensus 360 ~~~~~l~eRi~~l~~~~atI~irG~t~~~l~e~~r~i~Dal~a~~~ai~~-g~VpGGGa~e~~~s~~L~~~~-~~~~~~~ 437 (546)
T PRK14104 360 YDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEE-GIVPGGGVALLRASEQLKGIK-TKNDDQK 437 (546)
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHc-CcCcCchHHHHHHHHHHHHhh-cCChHHH
Confidence 89999999999999999999999999999999987 599999999999999999874 3578999
Q ss_pred HHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q 009718 429 HAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEM 508 (527)
Q Consensus 429 ~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~ 508 (527)
+++++|++||+.||++|++|||+|+.+++.+|+..| .+++|+|+.+|++.||++.|||||+.||.++|+.|+++|++
T Consensus 438 ~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~---~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~a~~ 514 (546)
T PRK14104 438 TGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKE---QYSYGFDSQTGEYGNLVSKGIIDPTKVVRTAIQNAASVAAL 514 (546)
T ss_pred HHHHHHHHHHHhhHHHHHHhCCCCHHHHHHHHHhcC---CCcEeEeCCCCceeehHhcCCEEcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997643 45799999999999999999999999999999999999999
Q ss_pred HHhHhHHhhcCCCCCC
Q 009718 509 ILRVDEIITCAPRRRE 524 (527)
Q Consensus 509 iL~iD~iI~~~~~~~~ 524 (527)
||+||++|...|++..
T Consensus 515 iL~id~~I~~~~~~~~ 530 (546)
T PRK14104 515 LITTEAMVAELPKKGG 530 (546)
T ss_pred HHHHHHHHhcCCcCCC
Confidence 9999999998885544
No 39
>PLN03167 Chaperonin-60 beta subunit; Provisional
Probab=100.00 E-value=1.4e-85 Score=705.82 Aligned_cols=462 Identities=22% Similarity=0.335 Sum_probs=411.4
Q ss_pred hhhhH--HHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccCh----HHHHHHHHHhhh
Q 009718 13 EEKGE--RARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQ 86 (527)
Q Consensus 13 ~~~~~--~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~ 86 (527)
...|+ ++|+..++|++.|+++|++||||+||+|||+++. |+++|||||+||+++|++.|| +|+|++++|++|
T Consensus 59 ~~~~~~~~ar~~l~~g~~~la~~vktTLGP~G~~kmi~~~~--G~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~q 136 (600)
T PLN03167 59 LHFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKY--GSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 136 (600)
T ss_pred eecCCcHHHHHHHHHHHHHHHHHHhccCCCCCCCEEEECCC--CCeeEeccHHHHHHHcccCCchhhHHHHHHHHHHHhh
Confidence 34566 7999999999999999999999999999999997 999999999999999999999 599999999999
Q ss_pred hcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccc
Q 009718 87 DDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKI 166 (527)
Q Consensus 87 ~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~ 166 (527)
++++||||||+++|+++||+++.+++.+|+||..|++||+.|.+.+++.|++++.|++. +.|.++++++.+
T Consensus 137 d~evGDGTTTvvVLa~~LL~ea~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~s~~v~d------~~L~~vA~tS~~--- 207 (600)
T PLN03167 137 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVKELKKMSKEVED------SELADVAAVSAG--- 207 (600)
T ss_pred hhhhCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCH------HHHHHHHHHhcc---
Confidence 99999999999999999999999999999999999999999999999999999988752 469999988753
Q ss_pred cchhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCc-eeeeeEEEeccCCC--------CCCccccCcceEEeee
Q 009718 167 LSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDS-FLDEGFILDKKIGI--------GQPKRIENAKILVANT 237 (527)
Q Consensus 167 ~~~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS-~l~~Givl~~~~~~--------~~~~~~~n~~Ill~~~ 237 (527)
+++.|++|+++|+.++++++. |...+|++.+|+ ++++|++|+++|.+ +||+.++||+|+++|+
T Consensus 208 ---~~~~i~~liaeAv~~Vg~~g~-----i~v~~g~s~~dsl~~v~G~~~d~g~~spyfvt~~~~m~~~l~np~Ill~d~ 279 (600)
T PLN03167 208 ---NNYEVGNMIAEAMSKVGRKGV-----VTLEEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDK 279 (600)
T ss_pred ---CcHHHHHHHHHHHHHhccCCc-----EEeccCCCccceeEEEEEEEecCCccCcccccCcCCCeEEEeCCEEEEEcc
Confidence 577999999999999976542 333478999997 99999999999742 4789999999999985
Q ss_pred ccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHH------HcCCeEEecCC
Q 009718 238 AMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFA------DAGILAIEHAD 311 (527)
Q Consensus 238 ~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~------~~~I~~i~~v~ 311 (527)
. +++.+++.++. +.+.+.++++++++++|++.++++|. ..+|+++++.+
T Consensus 280 ~--------------i~~~~~l~~~l-----------e~i~~~g~~lvI~a~~I~~~aL~~L~~nkl~g~~~i~aVk~p~ 334 (600)
T PLN03167 280 K--------------ITNARDLIGIL-----------EDAIRGGYPLLIIAEDIEQEALATLVVNKLRGSLKIAALKAPG 334 (600)
T ss_pred c--------------cCCHHHHHHHH-----------HHHHHhCcCEEEEcCCCCHHHHHHHHHhhccccceEEEEEccc
Confidence 2 46666766543 35566788999999999999999998 78899999986
Q ss_pred -----hhhHHHHHHHhCCcccc-----ccCCCCCCCCcccceEEEEE-----EcC--------eEEEEEecCC-------
Q 009718 312 -----FDGIERLALVTGGEIAS-----TFDNPESVKLGHCKLIEEIM-----IGE--------DKLIHFSGVE------- 361 (527)
Q Consensus 312 -----~~~L~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~-----i~~--------~~~~~~~~~~------- 361 (527)
+++|+|||.+||+++++ +++++++.++|+|+.|++.. +|+ +++.+|+++.
T Consensus 335 ~g~~~~~~L~dia~~tGa~~i~~~~~~~l~~~~~~~LG~a~~v~~~~~~t~iig~~~~~~~i~~r~~~i~~~~~~~~~~~ 414 (600)
T PLN03167 335 FGERKSQYLDDIAILTGGTVIREEVGLSLDKVGKEVLGTAAKVVLTKDTTTIVGDGSTQEAVNKRVAQIKNLIEAAEQDY 414 (600)
T ss_pred CCcchHHHHHHHHHhhCCEEecccccCCcccCCHHHCceeeEEEEecccceeeCCCccHHHHHHHHHHHHhhhhccCCHH
Confidence 78999999999999999 68888888999999999876 776 4777776653
Q ss_pred -----C------CceeEEe-ecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhHH
Q 009718 362 -----M------GQACTIV-LRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSH 429 (527)
Q Consensus 362 -----~------~~~~TIl-l~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~ 429 (527)
. .+.+|++ |||+|+.+++|+||+++||++++|++++++ +|||||++|++++.+|++++...++++|+
T Consensus 415 ~~~~l~~Ri~~l~g~~aiI~vgG~t~~~l~E~er~i~DAl~avk~ai~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 493 (600)
T PLN03167 415 EKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLASKVDAIKDTLENDEQK 493 (600)
T ss_pred HHHHHHHHHhhcCCcEEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHhcC-CCccHHHHHHHHHHHHHHHHhcCCChhHH
Confidence 0 1234555 999999999999999999999999999877 99999999999999999998877777774
Q ss_pred -HHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q 009718 430 -AIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEM 508 (527)
Q Consensus 430 -~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~ 508 (527)
+++++++||+.|||+||+|||+|+.+++.+|+.. +++++|||+.+|++.||++.|||||+.||+++|+.|+++|++
T Consensus 494 ~g~~~~~~Al~~p~r~La~NAG~d~~~vv~~L~~~---~~~~~G~d~~~g~~~dm~~~GI~Dp~~Vk~~al~~A~~~A~~ 570 (600)
T PLN03167 494 VGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSN---DNPKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKT 570 (600)
T ss_pred HHHHHHHHHHhcchhhhhhcCCCCHHHHHHHHHhc---CCCCEeEeCCCCcCcchHhccCeecHHHHHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999743 456899999999999999999999999999999999999999
Q ss_pred HHhHhHHhhcCCCC
Q 009718 509 ILRVDEIITCAPRR 522 (527)
Q Consensus 509 iL~iD~iI~~~~~~ 522 (527)
||+||++|...|.+
T Consensus 571 iL~iD~iI~~~~~~ 584 (600)
T PLN03167 571 FLTSDCVVVEIKEP 584 (600)
T ss_pred HHHHHHHhhcCCCC
Confidence 99999999987644
No 40
>KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.1e-82 Score=615.10 Aligned_cols=504 Identities=29% Similarity=0.468 Sum_probs=475.3
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
.+++...-.+-..+...|+.++..+.+++++.+||.|..||++++. |++.+|+||.+.+.+|++.||.+-++..++..
T Consensus 5 ~lnpkAEv~~~~aal~iNis~AigLqsV~~snlgPkgt~Kmlvsga--gdIklakdgnvLl~emQiqhPTa~lIakaatA 82 (520)
T KOG0359|consen 5 LLNPKAEVAQHQAALALNISAAIGLQSVLVLNLGPKGTEKMLVSGA--GDIKLAKDGNVLLKEMQIQHPTASLIAKVATA 82 (520)
T ss_pred CCCcHHHHHhhhcceeeccccccceeeeehhccCchhHHHhccCCc--cceEEEecchhhHHHHhhcCchHHHHHHHHHH
Confidence 4455566667778889999999999999999999999999999996 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
|++..||||||+|+|+++|+++|...+..|+||..|.+||+.|.+.++++|++.+.+++ ++.|..+++|++++|
T Consensus 83 qdd~tGDGttS~VlligEllkqa~~~i~eGlhprii~~gfe~a~~~~l~~L~k~~~~~~------~~~L~~va~tsl~Tk 156 (520)
T KOG0359|consen 83 QDDITGDGTTSVVLLIGELLKQADRYISEGLHPRIITEGFEAAKNKALEFLEKVSREVD------RETLKDVARTSLRTK 156 (520)
T ss_pred hhcccCCCcceEEEeeHHHHHHHHHHhhcCCCcchhhhHHHHHHHHHHhhhhccccchh------HHHHHHHHHHhhcCc
Confidence 99999999999999999999999999999999999999999999999999996666554 468999999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhc---cCCCcccceeEEeCCCCCCCceeeeeEEEeccC-CCCCCccccCcceEEeeecccc
Q 009718 166 ILSQDKEHFGQLAVDAVMRLK---GSTNLESIQIIKKPGGSLKDSFLDEGFILDKKI-GIGQPKRIENAKILVANTAMDT 241 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~---~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~-~~~~~~~~~n~~Ill~~~~Le~ 241 (527)
+...-.+.+++++++|+..+. +.+|+.+++|.+..-++..|+.+++|++++++. ++.||+..+|+.|+++|.+||+
T Consensus 157 v~~~la~~lt~~vv~aVl~i~~~~~~idl~mveim~mq~~s~~dT~~v~glvLdhg~rHpdmp~~~e~a~iL~~NvSLEY 236 (520)
T KOG0359|consen 157 VHAELADVLTPIVVDSVLCIRRQEEPIDLFMVEIMEMQHKSLHDTSLVQGLVLDHGARHPDMPRRVEDAYILICNVSLEY 236 (520)
T ss_pred ccHHHHhHhHHHHHhhheeeccCCCCcchhHHHhhhhccCchhhhHHhhhhhccCCCCCcccccchhceEEEEeeccccc
Confidence 999889999999999999875 236778999998888999999999999999995 4679999999999999999999
Q ss_pred ccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCC----eEEEeCccCCchHHHHHHHcCCeEEecCChhhHHH
Q 009718 242 DKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGI----NCFVNRQLIYNFPEELFADAGILAIEHADFDGIER 317 (527)
Q Consensus 242 ~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v----~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~ 317 (527)
+|++.+ +.+-+++.+|.+.+...|++++.+.+++|++.+- -+|++|+||||..++.|+++||+++||.++++|||
T Consensus 237 EK~Ein-sgffYsta~ere~L~~~eR~Fi~~r~~kiielk~~vc~fvvinqkGidp~sld~~a~~gIlaLRRAKRRNmER 315 (520)
T KOG0359|consen 237 EKPEIN-SGFFYSTAEEREVLVLAERKFIDQRVRKIIELKRKVCEFVVINQKGIDPTSLDSLAKSGILALRRAKRRNMER 315 (520)
T ss_pred cccccc-cchhccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcceEEEecccCCCCCcchhhhhcchHHHHHHhhhhHHH
Confidence 999986 6778899999999999999999999999998762 47789999999999999999999999999999999
Q ss_pred HHHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhh
Q 009718 318 LALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVN 397 (527)
Q Consensus 318 la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~ 397 (527)
|..+||+..+++++|+++..+|+|+.|++.++|+++|+|+++|++|++|||+++||+++.+.+++++++|++++++++++
T Consensus 316 L~lacGG~a~nsvddLtp~~LG~aglVye~tlGEEkfTFIE~~~~p~S~TiLikgpnkht~tQikdairdglrav~ntl~ 395 (520)
T KOG0359|consen 316 LVLACGGEAVNSVDDLTPDYLGYAGLVYEYTLGEEKFTFIEKCNNPSSVTILIKGPNKHTITQIKDAIRDGLRAVKNTLE 395 (520)
T ss_pred HHHhhccceecccccCChhhccccceeEEeeccceeeEeeecCCCCcceEEEEeCCccchHHHHHHHHhhHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccC
Q 009718 398 DSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVIS 477 (527)
Q Consensus 398 ~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~ 477 (527)
+..++||+|++|.+++.+|+...++.+++.++++++|++||..+|++|++|+|+|+.+.+.+|...|..+ ..|+|+.+
T Consensus 396 d~~~i~Gaga~~va~~~~lr~~k~~vkgra~~g~~afa~all~ipk~La~nsg~D~qe~l~~l~~e~~~~--~~g~dl~~ 473 (520)
T KOG0359|consen 396 DKCGIPGAGAFEVALGRHLRESKKSVKGRAYLGVKAFANALLVIPKTLAKNSGLDEQETLVSLKKEHEVT--LRGLDLFR 473 (520)
T ss_pred hcccccCchHHHHHHHHHHHHhhhccCchhhhhHHHHHhhhhhhhHHHHHhcCCchHHHHHHHHHhhhhh--hccccccc
Confidence 9999999999999999999988888999999999999999999999999999999999999999988654 45999999
Q ss_pred CcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCC
Q 009718 478 GSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAP 520 (527)
Q Consensus 478 g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~ 520 (527)
|+..+....||||.+.||++.|..++-+|+.||-+|+++.+..
T Consensus 474 g~~~~~~~~gi~Dny~v~~~~l~s~~via~nlLlvDEi~rAG~ 516 (520)
T KOG0359|consen 474 GEECDPSRKGIYDNYSVKKQLLRSEAVIATNLLLVDEIIRAGM 516 (520)
T ss_pred CCccchhhccccchHHHHHHHhhhhHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999999999999999999998864
No 41
>KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-68 Score=505.69 Aligned_cols=379 Identities=36% Similarity=0.546 Sum_probs=356.5
Q ss_pred cccchh--hhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHH
Q 009718 6 IFRDEA--NEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDIS 83 (527)
Q Consensus 6 ~~~~~~--~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~ 83 (527)
+++++. ....|-++.++++.|.++++++++||+||+|++|+++.+. +++++|||| .|++++++...+
T Consensus 14 iLrDQd~~~Ri~G~ea~Ks~I~agkaVA~~lrtSLGPkGlDK~l~~pd--gditvtndg---------d~~IakLmv~LS 82 (400)
T KOG0357|consen 14 ILRDQERKDRLFGLDAVKSHIGAAKAVARILRTSLGPKGLDKMLVSPD--GDITVTNDG---------VHQIAKLIVILS 82 (400)
T ss_pred EeeeccCCchhhHHHHhhhhhHHHHHHHHHHHhhcCccccccccccCC--CCceeeecc---------chHHHHHHHHhc
Confidence 344443 4578899999999999999999999999999999999997 999999999 789999999999
Q ss_pred hhhhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhc
Q 009718 84 KVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLS 163 (527)
Q Consensus 84 ~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~ 163 (527)
.+|+.++|||||.+++|++.++.++.+++.+|+||..|.+||..+.+.+++.|++.+-+.+
T Consensus 83 ~sqd~eIgdGtTgVvvLa~alleqa~~li~~~ihpiki~~g~e~~~~~av~~l~~i~~~~e------------------- 143 (400)
T KOG0357|consen 83 KSQDDEIGDGTTGVVVLAGALLEQAHELIDRGIHPIKIAQGYEKAKVVAVEHLDEISDPFE------------------- 143 (400)
T ss_pred ccchhhhccCCcccEEecccchHhHHhhcccccchhHHHHhhhhHHHhhhhhhhhhccccc-------------------
Confidence 9999999999999999999999999999999999999999999999999888876543211
Q ss_pred ccccchhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCCCCCccccCcceEEeeecccccc
Q 009718 164 SKILSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDK 243 (527)
Q Consensus 164 sK~~~~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~Ill~~~~Le~~~ 243 (527)
T Consensus 144 -------------------------------------------------------------------------------- 143 (400)
T KOG0357|consen 144 -------------------------------------------------------------------------------- 143 (400)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhC
Q 009718 244 VKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTG 323 (527)
Q Consensus 244 ~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tG 323 (527)
+..+++++++.|+++++|||+.||.+.++|-+++..++|||.-.++|.||..||
T Consensus 144 --------------------------f~emi~~vK~~ga~l~icqwgfddeanhll~~n~lpavrwVGGpEiEliAiaT~ 197 (400)
T KOG0357|consen 144 --------------------------FEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATG 197 (400)
T ss_pred --------------------------HHHHHHHHHhhCCcEEEEecccCchhhhHHhhcCCCceeecCCcceEEEEeecC
Confidence 446789999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCcccceEEEEEEc--CeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCcc
Q 009718 324 GEIASTFDNPESVKLGHCKLIEEIMIG--EDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRV 401 (527)
Q Consensus 324 a~ii~~~~~l~~~~lG~~~~v~~~~i~--~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~v 401 (527)
++|+++|+++++.++|+|+.|++..+| .+++..+++|++++.+||.+||+++.+++|.+|++|||||++|+++++.++
T Consensus 198 grIVprF~eL~~~kLG~aglVrE~sfgttkdkmlviEqc~nskaVTifvRg~Nkmii~EakrslhdalCvirnlird~ri 277 (400)
T KOG0357|consen 198 GRIVPRFSELTAEKLGFAGLVREISFGTTKDKMLVIEQCKNSKAVTIFVRGGNKMIIEEAKRSLHDALCVIRNLIRDNRV 277 (400)
T ss_pred CeeeccHhhhCHhhccccceEEEEecccccceEEEEEecCCCceEEEEEecCcceeHHHHHHHhhhhHHHHHHHhhcCee
Confidence 999999999999999999999999988 489999999999999999999999999999999999999999999999999
Q ss_pred ccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHh-cCCCcceEEccCCcc
Q 009718 402 LFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQ-KEGCPAGIDVISGSV 480 (527)
Q Consensus 402 vpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~-~~~~~~Gid~~~g~~ 480 (527)
|+|||++|+.||-.+.+.+.++++.+||++++||+||++||..|++|+|++|.+.++.+++.+- .+++.+|+|+.-..-
T Consensus 278 vYgGGaaEiscslav~~ead~~~g~eqya~rafa~ale~ipmalaensgl~pi~~ls~~ka~q~~~~~~~lGidcl~~G~ 357 (400)
T KOG0357|consen 278 VYGGGAAEISCALAVSQEADKIPGIEQYAFRAFADALESIPMALAENSGLDPIETLSDVKARQVKEMNPALGIDCLHKGT 357 (400)
T ss_pred EecCchHHhhhhhHhhHhhccCCcHHHHHHHHHHHHHhhcchhhhhccCCCchhhhhHhHHHHHHhcCcccCcchhccCc
Confidence 9999999999999999999999999999999999999999999999999999999999988763 457789999988888
Q ss_pred cccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCC
Q 009718 481 GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAP 520 (527)
Q Consensus 481 ~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~ 520 (527)
.||.+.+|+||+..|++.+..|++++.|||+||+++....
T Consensus 358 nDMk~~~vie~l~~KkqQi~laTQ~vrMiLKiddv~~~~~ 397 (400)
T KOG0357|consen 358 NDMKEQHVIETLIGKKQQISLATQMVRMILKIDDVRKPGE 397 (400)
T ss_pred hhhhhhccHHHhhhhHHHHHHHHHHHHHhhhccceecCCC
Confidence 9999999999999999999999999999999999987654
No 42
>KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.4e-54 Score=434.52 Aligned_cols=457 Identities=24% Similarity=0.344 Sum_probs=374.9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccc----cChHHHHHHHHHhhhh
Q 009718 12 NEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHI----DNPAAKVLVDISKVQD 87 (527)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~----~hP~a~ll~~~~~~~~ 87 (527)
+..+|.++|...++++..|+++|..|+||+||+++|.+.. |.|.|||||.|+.+++.+ +|.+|+++++.+.+.+
T Consensus 18 ~i~fg~~~r~~ll~Gv~~Ladav~~TlgpKgrnViieq~~--gsPkvtkdgvTva~si~l~d~~~n~gaklvq~va~~tN 95 (550)
T KOG0356|consen 18 DIKFGKDVRAKLLQGVDLLADAVAVTLGPKGRNVIIEQSW--GSPKVTKDGVTVAKSIELKDKYENIGAKLVQDVANNTN 95 (550)
T ss_pred ccccCHHHHHHHHhhHHHHHHHhhhhccCCcceEEccccc--CCCceecCCceeeccccccchhhhhccHHHHHHHhhcc
Confidence 3568889999999999999999999999999999999885 999999999999999997 4669999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccccc
Q 009718 88 DEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKIL 167 (527)
Q Consensus 88 ~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~ 167 (527)
+..||||||+++|+.++..++.+-+.+|.+|.+|.+|...+.+.+.+.|.+++.|++.. +++.+++.. +
T Consensus 96 ~~agdGtttatvlar~i~~eg~~~v~~G~npv~irrGi~~av~~vv~~L~k~sk~Vtt~-----eeIaqVAti------S 164 (550)
T KOG0356|consen 96 EEAGDGTTTATVLARAIAKEGFEKVAKGANPVEIRRGIMLAVDAVVDELKKMSKPVTTP-----EEIAQVATI------S 164 (550)
T ss_pred CccccCcchHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHhCCCCCCH-----HHHHHHHhh------h
Confidence 99999999999999999999999999999999999999999999999999999999976 678888863 4
Q ss_pred chhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCC-ceeeeeEEEeccCCCCCCcc----------ccCcceEEee
Q 009718 168 SQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKD-SFLDEGFILDKKIGIGQPKR----------IENAKILVAN 236 (527)
Q Consensus 168 ~~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~d-S~l~~Givl~~~~~~~~~~~----------~~n~~Ill~~ 236 (527)
++++..+.+++.+|+.+++.++- |.| ..|....| -++++|+-|+++|. .|++ +++|++++.+
T Consensus 165 AngD~~ig~li~~a~~kvG~~GV---Itv--~~gkt~~delev~eGmkfdrGyi--SPyfi~~~k~~~~e~e~~~~ll~~ 237 (550)
T KOG0356|consen 165 ANGDKEIGNLISDAMKKVGRKGV---ITV--KDGKTLEDELEVIEGMKFDRGYI--SPYFITSSKKQKVEFENALLLLSE 237 (550)
T ss_pred cCCcHHHHHHHHHHHHHhCcCCe---EEe--ecCCccccchhhhhccccccccc--Cccccccchhhhhhhhhhhhhhhh
Confidence 67899999999999999988773 222 35666655 47899999999963 4444 4555555542
Q ss_pred eccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHc------CCeEEecC
Q 009718 237 TAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIEHA 310 (527)
Q Consensus 237 ~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~------~I~~i~~v 310 (527)
..|++++++.+..+...+ +.++ +++....++..++..|--+ .+++++..
T Consensus 238 --------------kki~~v~~ivp~LE~A~~--~~~P---------LliIAeDi~~eaL~tLIlNkLk~glqV~AvKap 292 (550)
T KOG0356|consen 238 --------------KKISSVQSIVPALELALA--KRRP---------LLIIAEDIDGEALATLVLNKLKGGLQVVAVKAP 292 (550)
T ss_pred --------------hhhhHHHHHhHHHHHhhh--ccCc---------eEEEehhcchhHHHHHHhhhhccceeEEEEecC
Confidence 246777776553321111 1222 3444445555444444322 23344333
Q ss_pred -----ChhhHHHHHHHhCCccccc------cCCCCCCCCcccceEEEEEEcCeEEEEEec--------------------
Q 009718 311 -----DFDGIERLALVTGGEIAST------FDNPESVKLGHCKLIEEIMIGEDKLIHFSG-------------------- 359 (527)
Q Consensus 311 -----~~~~L~~la~~tGa~ii~~------~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~-------------------- 359 (527)
..+.+.+++.+||+.++.. +++.+..++|.|..+... -+.-..+.+
T Consensus 293 gfGdnrk~~l~Diai~Tg~~v~~~e~~~l~le~~~~~dLG~~~evvvt---kd~t~ll~g~~~~~~v~~rIeqik~~~e~ 369 (550)
T KOG0356|consen 293 GFGDNRKNLLKDIAILTGATVFGEELSTLNLEDAKLEDLGEVGEVVVT---KDDTMLLKGKGNKAQVEGRIEQIKEMIEE 369 (550)
T ss_pred CCcchHHHhhhHHHHHhhhhhhccchhhcccccCchhhcCcceeEEEe---cCcceeeCCCCCHHHHHHHHHHHHHHHHh
Confidence 3356999999999999973 556777889999888732 221112211
Q ss_pred ---------------CCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCC
Q 009718 360 ---------------VEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTP 424 (527)
Q Consensus 360 ---------------~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~ 424 (527)
-..+++++|.++|.++.+++|++.+++||++++++++ ++|+|||||++.++|+..|.+....-+
T Consensus 370 t~~~ye~ekl~er~a~ls~gvavi~vGg~se~Ev~ekk~rv~dalnat~aav-eeGivpGGG~all~~~~~l~~lk~~~~ 448 (550)
T KOG0356|consen 370 TTSDYEKEKLNERLAKLSGGVAVIKVGGHSEVEVNEKKDRVEDALNATRAAV-EEGIVPGGGTALLRAIPVLDELKATNN 448 (550)
T ss_pred hhhhhhHhHHHHHHHHhcCCeEEEEecCcchhhhhhhhhhHHHHHHHHHHHh-hcCcccCCchHHHHhhhhhhhcccccc
Confidence 0025799999999999999999999999999999999 799999999999999999998776445
Q ss_pred ChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHH
Q 009718 425 GKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATE 504 (527)
Q Consensus 425 ~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~ 504 (527)
..++.+++++.+||..|.+++++|||.|+..++.+++. ..+|||..+|+++||++.||+||+.|.+.+|..|..
T Consensus 449 ~~~k~G~eiv~~Al~~P~~~IakNAGvdg~~vv~Kv~~------~~~gyda~~~ey~dlv~~GiidP~kVvr~al~~a~~ 522 (550)
T KOG0356|consen 449 FDQKVGVEIVKKALRLPAQTIAKNAGVDGSVVVEKVLN------DDYGYDAAKGEYVDLVEAGIIDPTKVVRTALTDAAG 522 (550)
T ss_pred hHhhhhHHHHHHHHhhhHHHHHHhcCCchHHHHHHHHh------hhhhhhhhcccHHHHHhccCCChHHHHHHhhhhhhH
Confidence 67888899999999999999999999999999999982 279999999999999999999999999999999999
Q ss_pred HHHHHHhHhHHhhcCCCCC
Q 009718 505 AAEMILRVDEIITCAPRRR 523 (527)
Q Consensus 505 ~a~~iL~iD~iI~~~~~~~ 523 (527)
+|+++++++.+|...|+++
T Consensus 523 vasll~tte~vvteipk~~ 541 (550)
T KOG0356|consen 523 VASLLTTTEAVVTEIPKEE 541 (550)
T ss_pred HHHHHhhheeEEEeccccc
Confidence 9999999999999988764
No 43
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=100.00 E-value=5.8e-39 Score=313.45 Aligned_cols=227 Identities=23% Similarity=0.353 Sum_probs=208.0
Q ss_pred chhhhHHHHHHHHHHHhhcc------CCCcc-cceeEEeCCCCCCCceeeeeEEEeccCCC-CCCccccCcceEEeeecc
Q 009718 168 SQDKEHFGQLAVDAVMRLKG------STNLE-SIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAM 239 (527)
Q Consensus 168 ~~~~~~l~~li~~a~~~~~~------~~~~~-~I~i~~~~g~~~~dS~l~~Givl~~~~~~-~~~~~~~n~~Ill~~~~L 239 (527)
..|.++|++++++|+..+.. .+|++ +|+|.+++||+++||++++|+++++.+.+ .||+.++||||++++|+|
T Consensus 17 ~~~~~~ls~l~v~Av~~v~~~~~~~~~~di~~~I~I~ki~Ggs~~dS~li~Gvvi~k~~~~~~m~~~i~n~kIlll~~~L 96 (261)
T cd03334 17 ESWLDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKIPGGSPSDSEVVDGVVFTKNVAHKRMPSKIKNPRILLLQGPL 96 (261)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccCCccChhHceEEEEecCCCHHHcEEEeeEEEeCCCCCccCCcccCCCcEEEEeeee
Confidence 46789999999999998842 34554 59999999999999999999999998754 699999999999999999
Q ss_pred ccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHH
Q 009718 240 DTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLA 319 (527)
Q Consensus 240 e~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la 319 (527)
++++++ .++++++.+.+.|++++++++++|++.|+|+|+++++|++.+++||.++||++++++++++|+|||
T Consensus 97 e~~~~~--------~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nvIl~~k~I~~~a~~~l~k~gI~~v~~v~~~dl~rIa 168 (261)
T cd03334 97 EYQRVE--------NKLLSLDPVILQEKEYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEAGITLVLNVKPSVLERIS 168 (261)
T ss_pred cccccc--------CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCccCHHHHHHHHHCCCEEEEecCHHHHHHHH
Confidence 998864 246788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCccccc-cCCCCCCCCcccceEEEEEEcC-----eEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHH
Q 009718 320 LVTGGEIAST-FDNPESVKLGHCKLIEEIMIGE-----DKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLS 393 (527)
Q Consensus 320 ~~tGa~ii~~-~~~l~~~~lG~~~~v~~~~i~~-----~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~ 393 (527)
++|||+++++ .+++++..+|+|+.|++.++|+ ++|++|++|+.++++||+|||+|+..++|+||+++||+++++
T Consensus 169 ~~tGa~ii~~i~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~~~~~TIlLRG~t~~~lde~eR~i~Dal~v~~ 248 (261)
T cd03334 169 RCTGADIISSMDDLLTSPKLGTCESFRVRTYVEEHGRSKTLMFFEGCPKELGCTILLRGGDLEELKKVKRVVEFMVFAAY 248 (261)
T ss_pred HHhCCEEecChhhhcCcccCcCcceEEEEEecCcCCCceeEEEEecCCCCceeEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 4588999999999999999996 699999999988999999999999999999999999999999
Q ss_pred HHhhCCccc
Q 009718 394 QTVNDSRVL 402 (527)
Q Consensus 394 ~~~~~~~vv 402 (527)
++..+..++
T Consensus 249 ~~~le~~~~ 257 (261)
T cd03334 249 HLKLETSFL 257 (261)
T ss_pred HHHHhHHHH
Confidence 998665443
No 44
>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.
Probab=100.00 E-value=2.2e-35 Score=280.92 Aligned_cols=203 Identities=39% Similarity=0.608 Sum_probs=192.3
Q ss_pred HHHHHHHHHhhcccccchhhhHHHHHHHHHHHhhcc---CCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccc
Q 009718 152 SDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKG---STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRI 227 (527)
Q Consensus 152 ~~l~~i~~t~l~sK~~~~~~~~l~~li~~a~~~~~~---~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~ 227 (527)
+.|.++++|+++||+ +.|.+.+++++++|+..+++ ..+.++|+|.+++||+++||++++|++|++++. ..||+.+
T Consensus 2 ~~l~~ia~ts~~sk~-~~~~~~l~~l~~~Av~~v~~~~~~~~~~~I~i~~~~gg~~~ds~li~Gv~~~~~~~~~~m~~~~ 80 (209)
T cd03333 2 ELLLQVATTSLNSKL-SSWDDFLGKLVVDAVLKVGPDNRMDDLGVIKVEKIPGGSLEDSELVVGVVFDKGYASPYMPKRL 80 (209)
T ss_pred hHHHHHHHHHhccch-hhHHHHHHHHHHHHHHHhhccCCCCchHHEEEEEecCcChhhceeEeeEEEeccccCCCCCeEc
Confidence 468999999999999 99999999999999999975 345779999999999999999999999999975 4689999
Q ss_pred cCcceEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEE
Q 009718 228 ENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAI 307 (527)
Q Consensus 228 ~n~~Ill~~~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i 307 (527)
+||||++++++|++ +|+++++|++.+++||.++||+++
T Consensus 81 ~n~~Ill~~~~le~------------------------------------------vii~~~~I~~~al~~l~~~~I~~v 118 (209)
T cd03333 81 ENAKILLLDCPLEY------------------------------------------VVIAEKGIDDLALHYLAKAGIMAV 118 (209)
T ss_pred CCCcEEEEeCCeeE------------------------------------------EEEecCcccHHHHHHHHHCCCEEE
Confidence 99999999999875 999999999999999999999999
Q ss_pred ecCChhhHHHHHHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHH
Q 009718 308 EHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHD 387 (527)
Q Consensus 308 ~~v~~~~L~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~d 387 (527)
+++++++|+|||++|||+++++++++++..+|+|+++++..+++++|++|++|..++.|||+|||||+.+++|+||+++|
T Consensus 119 ~~~~~~~l~~ia~~tga~ii~~~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~~~~~tIllrG~t~~~l~e~kr~l~d 198 (209)
T cd03333 119 RRVKKEDLERIARATGATIVSSLEDLTPEDLGTAELVEETKIGEEKLTFIEGCKGGKAATILLRGATEVELDEVKRSLHD 198 (209)
T ss_pred EeCCHHHHHHHHHHHCCEEecccccCChhhceeeeEEEEEEECCeEEEEEEcCCCCCEEEEEEECCCHhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred HHHHHHHHhh
Q 009718 388 ALCVLSQTVN 397 (527)
Q Consensus 388 al~~~~~~~~ 397 (527)
|+++++++++
T Consensus 199 al~~~~~~~~ 208 (209)
T cd03333 199 ALCAVRAAVE 208 (209)
T ss_pred HHHHHHHHhh
Confidence 9999999985
No 45
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=99.83 E-value=6.7e-20 Score=203.19 Aligned_cols=232 Identities=22% Similarity=0.309 Sum_probs=201.3
Q ss_pred hhhhHHHHHHHHHHHhhccCC------C-cccceeEEeCCCCCCCceeeeeEEEeccCCC-CCCccccCcceEEeeeccc
Q 009718 169 QDKEHFGQLAVDAVMRLKGST------N-LESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMD 240 (527)
Q Consensus 169 ~~~~~l~~li~~a~~~~~~~~------~-~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~-~~~~~~~n~~Ill~~~~Le 240 (527)
.|.+.+..++.+|...+.++. + .++++|.+++||+..||+++.|+++.+...+ .|+.+.++|||+++.++|+
T Consensus 332 ~W~~ii~~L~~eaa~~~kp~~~~~~~md~~~YVkvK~I~~g~~~dS~vi~Gvv~sKn~~~k~M~~~~e~prilll~g~le 411 (1598)
T KOG0230|consen 332 EWLDIITSLCWEAANLLKPDTDSGGLMDPGNYVKVKCVAGGSRVDSEVIKGVVCSKNVAHKRMATKYENPRILLLGGPLE 411 (1598)
T ss_pred hHHHHHHHHHHHHHHhcCcCcccCCCcCcccceEEEEecCCCcccceeeeEEEeecchhhhhhhhhccCCceEEEecchh
Confidence 578889999999999876532 1 3689999999999999999999999988654 5899999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009718 241 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 320 (527)
Q Consensus 241 ~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~ 320 (527)
+.+.... +.+.+. +.+.|+++++..+.+|....+++++..++|..+++++|...+|.++-++++.-|+||++
T Consensus 412 yqrisn~-----lsS~et---vlqqE~e~lk~~varI~s~~p~vllVeksVS~~aqe~L~~k~I~lvlnvK~s~leRIsR 483 (1598)
T KOG0230|consen 412 YQRISNQ-----LSSIET---VLQQEKEYLKKVVARIESLRPDVLLVEKSVSRIAQELLLDKGISLVLNVKRSLLERISR 483 (1598)
T ss_pred hhhhhcc-----ccchHH---HHhhHHHHHHHHHHHHHhcCCCeEEEechHHHHHHHHhhccCeEEEEeccHHHHHHHHH
Confidence 9875432 334333 33348999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCccccccCCCCCCCCcccceEEEEEEc-----CeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHH
Q 009718 321 VTGGEIASTFDNPESVKLGHCKLIEEIMIG-----EDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQT 395 (527)
Q Consensus 321 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~-----~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~ 395 (527)
+|||.|+++++.++...+|+|+.++...+. .+.+.+|++|+.+.+|||+|||....++++.++.++-++.++.++
T Consensus 484 ~tga~I~~siDslt~~klg~C~~F~v~~~~e~hk~sKTlmffegc~~~lG~TiLLrG~~~~eLkkVK~Vvq~~v~aay~l 563 (1598)
T KOG0230|consen 484 CTGADIVPSVDSLTSQKLGYCELFRVENYVEEHKPSKTLMFFEGCPKPLGCTILLRGDSLEELKKVKHVVQYLVFAAYHL 563 (1598)
T ss_pred HhcCceecchhhhhccccCCCccHhhhhhhhcccchhhhHHhhcCCCCCCceEEecCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999876654 568999999999999999999999999999999999999999887
Q ss_pred hhCCccccCCChH
Q 009718 396 VNDSRVLFGGGWP 408 (527)
Q Consensus 396 ~~~~~vvpGGG~~ 408 (527)
.-+..++.--|+.
T Consensus 564 ~LE~SflaDe~as 576 (1598)
T KOG0230|consen 564 ALETSFLADEGAS 576 (1598)
T ss_pred HHhhhhhhccCCc
Confidence 6555555444443
No 46
>cd00851 MTH1175 This uncharacterized conserved protein belongs to a family of iron-molybdenum cluster-binding proteins that includes NifX, NifB, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme. This domain is a predicted small-molecule-binding domain (SMBD) with an alpha/beta fold that is present either as a stand-alone domain (e.g. NifX and NifY) or fused to another conserved domain (e.g. NifB) however, its function is still undetermined.The SCOP database suggests that this domain is most similar to structures within the ribonuclease H superfamily. This conserved domain is represented in two of the three major divisions of life (bacteria and archaea).
Probab=44.60 E-value=66 Score=25.96 Aligned_cols=44 Identities=16% Similarity=0.199 Sum_probs=34.7
Q ss_pred HHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHH
Q 009718 272 EKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIER 317 (527)
Q Consensus 272 ~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~ 317 (527)
...+.|...++++|++. ++.+.+...|.++||.++.... ..++.
T Consensus 54 ~~~~~l~~~~v~~vi~~-~iG~~~~~~l~~~gI~v~~~~~-~~i~~ 97 (103)
T cd00851 54 KAAEFLADEGVDVVIVG-GIGPRALNKLRNAGIKVYKGAE-GTVEE 97 (103)
T ss_pred HHHHHHHHcCCCEEEeC-CCCcCHHHHHHHCCCEEEEcCC-CCHHH
Confidence 35566777899999996 6899999999999999997665 34444
No 47
>PF02579 Nitro_FeMo-Co: Dinitrogenase iron-molybdenum cofactor; InterPro: IPR003731 This entry represents several Nif (B, X and Y) proteins, which are involved in the biosynthesis of the iron-molybdenum cofactor (FeMo-co) found in the dinitrogenase enzyme of the nitrogenase complex in nitrogen-fixing bacteria. The nitrogenase complex catalyses the reduction of atmospheric dinitrogen to ammonia, and is composed of an iron metalloprotein (dinitrogenase reductase; homodimer of NifH; IPR000392 from INTERPRO) and a Fe-Mo metalloprotein (dinitrogenase; heterotetramer of NifD and NifK; IPR000318 from INTERPRO). The pathway for the synthesis of the Fe-Mo cofactor involves several proteins, including NifB, NifE, NifH, NifN, NifQ, NifV and NifX. NifB appears to be an iron-sulphur source for FeMo-co biosynthesis, while NifX may be associated with the mature FeMo-co, in particular with the addition of homocitrate during the last step of biosynthesis []. The NifX protein shows sequence similarity with the C terminus of NifB [], as well as to the conserved protein MTH1175 from the archaeon Methanobacterium thermoautotrophicum, which displays a ribonuclease H-like motif of three layers, alpha/beta/alpha, with a single mixed beta-sheet [].; PDB: 2QTD_A 2KLA_A 1EO1_A 1P90_A 1RDU_A 2YX6_D 1O13_A 1T3V_A 2RE2_B 2WFB_A.
Probab=43.45 E-value=70 Score=25.26 Aligned_cols=43 Identities=16% Similarity=0.136 Sum_probs=33.4
Q ss_pred HHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHH
Q 009718 273 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIER 317 (527)
Q Consensus 273 ~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~ 317 (527)
..+.|...+|+++++. +|.+-+...|.++||-++.. ...+++.
T Consensus 45 ~~~~l~~~~v~~li~~-~iG~~~~~~L~~~gI~v~~~-~~~~i~~ 87 (94)
T PF02579_consen 45 IAKFLAEEGVDVLICG-GIGEGAFRALKEAGIKVYQG-AGGDIEE 87 (94)
T ss_dssp HHHHHHHTTESEEEES-CSCHHHHHHHHHTTSEEEES-TSSBHHH
T ss_pred HHHHHHHcCCCEEEEe-CCCHHHHHHHHHCCCEEEEc-CCCCHHH
Confidence 4556667899999986 58999999999999999987 4433443
No 48
>COG1433 Uncharacterized conserved protein [Function unknown]
Probab=35.93 E-value=1.5e+02 Score=25.40 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=33.7
Q ss_pred HHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCCh
Q 009718 273 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADF 312 (527)
Q Consensus 273 ~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~ 312 (527)
..+.|++.|+++|++. .+.+-+..+|.+.||-+..-.+.
T Consensus 57 ~a~~l~~~gvdvvi~~-~iG~~a~~~l~~~GIkv~~~~~~ 95 (121)
T COG1433 57 IAELLVDEGVDVVIAS-NIGPNAYNALKAAGIKVYVAPGG 95 (121)
T ss_pred HHHHHHHcCCCEEEEC-ccCHHHHHHHHHcCcEEEecCCC
Confidence 5788899999999996 67899999999999999876663
No 49
>COG3962 Acetolactate synthase [Amino acid transport and metabolism]
Probab=34.92 E-value=31 Score=36.32 Aligned_cols=40 Identities=20% Similarity=0.277 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcC
Q 009718 383 RSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKT 423 (527)
Q Consensus 383 ~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~ 423 (527)
|.+.+|+..+|++- +|-+|.|||+-+-.+...|+.++++.
T Consensus 217 ~eL~~A~~lik~ak-~PlIvaGGGv~YS~A~~~L~af~E~~ 256 (617)
T COG3962 217 RELADAAALIKSAK-KPLIVAGGGVLYSGAREALRAFAETH 256 (617)
T ss_pred HHHHHHHHHHHhcC-CCEEEecCceeechHHHHHHHHHHhc
Confidence 56778999999995 89999999999999999999888753
No 50
>cd00562 NifX_NifB This CD represents a family of iron-molybdenum cluster-binding proteins that includes NifB, NifX, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme. This domain is a predicted small-molecule-binding domain (SMBD) with an alpha/beta fold that is present either as a stand-alone domain (e.g. NifX and NifY) or fused to another conserved domain (e.g. NifB) however, its function is still undetermined.The SCOP database suggests that this domain is most similar to structures within the ribonuclease H superfamily. This conserved domain is represented in two of the three major divisions of life (bacteria and archaea).
Probab=34.55 E-value=1.3e+02 Score=24.00 Aligned_cols=38 Identities=18% Similarity=0.177 Sum_probs=31.9
Q ss_pred HHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCC
Q 009718 273 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHAD 311 (527)
Q Consensus 273 ~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~ 311 (527)
....+...+|+++++. ++.+.+...|.++||.++....
T Consensus 53 ~~~~l~~~~v~~vi~~-~iG~~a~~~l~~~gI~v~~~~~ 90 (102)
T cd00562 53 AARLLALEGCDAVLVG-GIGGPAAAKLEAAGIKPIKAAE 90 (102)
T ss_pred HHHHHHHCCCcEEEEc-ccCccHHHHHHHcCCEEEEcCC
Confidence 4556667899999997 5899999999999999987665
No 51
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]
Probab=30.35 E-value=6.1e+02 Score=28.76 Aligned_cols=159 Identities=16% Similarity=0.262 Sum_probs=82.3
Q ss_pred ccCcceEEeeeccc-cccccccCeE-EEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCC---eEEEeCccCCchHHHHHHH
Q 009718 227 IENAKILVANTAMD-TDKVKIYGAR-VRVDSMSKAAEIEGAEKQKMREKVQKIIAHGI---NCFVNRQLIYNFPEELFAD 301 (527)
Q Consensus 227 ~~n~~Ill~~~~Le-~~~~~~~~~~-i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v---~lvl~~~~I~~~~~~~l~~ 301 (527)
+.++-.+.+..+++ .+.+-.+-.+ +.++++.+-++++-+.+- -.++.+.+.|. .+-+....+..+...|-.+
T Consensus 464 LS~VmFiaTANsl~tIP~PLlDRMEiI~lsgYt~~EKl~IAk~~---LiPk~~~~~gL~~~el~i~d~ai~~iI~~YTRE 540 (782)
T COG0466 464 LSKVMFIATANSLDTIPAPLLDRMEVIRLSGYTEDEKLEIAKRH---LIPKQLKEHGLKKGELTITDEAIKDIIRYYTRE 540 (782)
T ss_pred hhheEEEeecCccccCChHHhcceeeeeecCCChHHHHHHHHHh---cchHHHHHcCCCccceeecHHHHHHHHHHHhHh
Confidence 34444444445566 4444333222 456666555555544333 34566666664 4667766777888899999
Q ss_pred cCCeEEecCChhhHHHHHHHhCCcccc-------cc----------------CCC-CCCCCcccceEEEEEEcCeEEEEE
Q 009718 302 AGILAIEHADFDGIERLALVTGGEIAS-------TF----------------DNP-ESVKLGHCKLIEEIMIGEDKLIHF 357 (527)
Q Consensus 302 ~~I~~i~~v~~~~L~~la~~tGa~ii~-------~~----------------~~l-~~~~lG~~~~v~~~~i~~~~~~~~ 357 (527)
+|+- .+.+ ++..||+-.--.++. .+ +.. .....|...-+-....||+-+ .+
T Consensus 541 AGVR---~LeR-~i~ki~RK~~~~i~~~~~k~~~~i~~~~l~~yLG~~~f~~~~~~~~~~vGvVtGLAWT~vGGd~L-~I 615 (782)
T COG0466 541 AGVR---NLER-EIAKICRKAAKKILLKKEKSIVKIDEKNLKKYLGVPVFRYGKAEEEDQVGVVTGLAWTEVGGDLL-TI 615 (782)
T ss_pred hhhh---HHHH-HHHHHHHHHHHHHHhcCcccceeeCHHHHHHHhCCcccCccccccCCCCeeEeeeeeecCCceEE-EE
Confidence 9983 3322 244444422111111 00 101 112244444444445666554 33
Q ss_pred ecCC-CCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhh
Q 009718 358 SGVE-MGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVN 397 (527)
Q Consensus 358 ~~~~-~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~ 397 (527)
+... .+++ .+.+.|.-..+++| +..-|+-.+|+...
T Consensus 616 E~~~~~Gkg-~l~lTG~LGdVMKE---Sa~~A~s~vrs~a~ 652 (782)
T COG0466 616 EAVKMPGKG-KLTLTGSLGDVMKE---SAQAALSYVRSRAE 652 (782)
T ss_pred EEEEecCCc-cEEEeccHHHHHHH---HHHHHHHHHHHHHH
Confidence 3322 2344 89998877666665 55667777777654
No 52
>smart00574 POX domain associated with HOX domains.
Probab=27.91 E-value=1.7e+02 Score=25.68 Aligned_cols=46 Identities=17% Similarity=0.195 Sum_probs=31.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHh
Q 009718 376 HVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELAR 421 (527)
Q Consensus 376 ~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~ 421 (527)
.+++|++++.+....-++.++..=..|+|+|++-...+-+|+..+.
T Consensus 84 ~mL~eVd~RY~qY~~qmq~v~ssFe~vaG~g~a~~yt~lAl~a~Sr 129 (140)
T smart00574 84 SMLEEVDRRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTISR 129 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 4567777777666666665554335678998888877777775543
No 53
>PF07526 POX: Associated with HOX; InterPro: IPR006563 This domain in found exclusively in plant proteins, associated with HOX domains which may suggest these proteins are homeodomain transcription factors.
Probab=21.79 E-value=2e+02 Score=25.26 Aligned_cols=46 Identities=20% Similarity=0.244 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHh
Q 009718 376 HVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELAR 421 (527)
Q Consensus 376 ~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~ 421 (527)
.+++|++++.+....=++.++..=-.|.|.|++-...+-+|+..+.
T Consensus 84 ~mL~eVd~RY~qY~~Qmq~VvssFe~vaG~gaA~~YtalAlqamSr 129 (140)
T PF07526_consen 84 SMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAAPYTALALQAMSR 129 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhHHHHHHHHHH
Confidence 4566666666655555555443224578998888887777776543
No 54
>KOG2663 consensus Acetolactate synthase, small subunit [Amino acid transport and metabolism]
Probab=21.36 E-value=93 Score=30.04 Aligned_cols=27 Identities=37% Similarity=0.619 Sum_probs=24.4
Q ss_pred eEEeecCCcHhHHHHHHHHHHHHHHHHH
Q 009718 366 CTIVLRGASHHVLDEAERSLHDALCVLS 393 (527)
Q Consensus 366 ~TIll~G~t~~~l~e~~~~i~dal~~~~ 393 (527)
.||+|+| ++..++|.++.++|-.++.+
T Consensus 121 mTIVl~G-td~VveQa~rQiedlVnV~a 147 (309)
T KOG2663|consen 121 MTIVLQG-TDGVVEQARRQIEDLVNVYA 147 (309)
T ss_pred ceEEEec-cHHHHHHHHHHHHHhhhhhe
Confidence 4999999 78899999999999999885
Done!