Query 009718
Match_columns 527
No_of_seqs 143 out of 1495
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 11:28:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009718.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009718hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_B T-complex protein 1 sub 100.0 1E-114 4E-119 924.1 58.8 510 10-521 2-513 (513)
2 3iyg_H T-complex protein 1 sub 100.0 4E-114 2E-118 918.7 58.0 509 8-519 1-514 (515)
3 3iyg_A T-complex protein 1 sub 100.0 2E-113 8E-118 916.8 58.3 505 10-520 2-529 (529)
4 3ko1_A Chaperonin; 9-fold symm 100.0 2E-114 7E-119 926.6 48.2 514 6-525 18-539 (553)
5 3ruv_A Chaperonin, CPN; double 100.0 2E-113 7E-118 919.3 53.3 513 6-524 7-524 (543)
6 3iyg_G T-complex protein 1 sub 100.0 1E-112 4E-117 909.1 57.4 504 10-519 1-514 (515)
7 1a6d_B Thermosome (beta subuni 100.0 2E-113 7E-118 920.2 51.6 514 6-525 9-529 (543)
8 3p9d_G T-complex protein 1 sub 100.0 2E-114 8E-119 926.7 43.6 517 6-525 12-533 (550)
9 1q3q_A Thermosome alpha subuni 100.0 5E-113 2E-117 917.2 53.7 513 6-524 11-530 (548)
10 3p9d_B T-complex protein 1 sub 100.0 2E-114 7E-119 925.7 38.0 522 1-525 1-524 (527)
11 3iyg_D T-complex protein 1 sub 100.0 6E-112 2E-116 903.9 55.8 503 11-519 4-518 (518)
12 3p9d_A T-complex protein 1 sub 100.0 2E-112 6E-117 913.6 50.3 513 7-525 13-554 (559)
13 1a6d_A Thermosome (alpha subun 100.0 2E-112 6E-117 912.0 50.0 509 6-522 10-525 (545)
14 3iyg_Z T-complex protein 1 sub 100.0 3E-111 9E-116 897.8 55.4 500 11-518 3-516 (517)
15 3p9d_H T-complex protein 1 sub 100.0 5E-113 2E-117 919.4 36.4 515 5-525 12-554 (568)
16 3iyg_E T-complex protein 1 sub 100.0 5E-110 2E-114 889.2 58.3 504 11-518 3-514 (515)
17 3p9d_C T-complex protein 1 sub 100.0 8E-112 3E-116 908.3 43.7 510 6-521 7-588 (590)
18 3iyg_Q T-complex protein 1 sub 100.0 5E-110 2E-114 888.7 56.8 502 9-518 1-511 (512)
19 3p9d_D T-complex protein 1 sub 100.0 6E-112 2E-116 904.6 41.3 513 1-519 1-528 (528)
20 3p9d_F T-complex protein 1 sub 100.0 7E-112 2E-116 908.9 40.4 519 1-524 1-542 (546)
21 3p9d_E T-complex protein 1 sub 100.0 2E-110 8E-115 898.0 48.6 513 6-521 31-560 (562)
22 3aq1_B Thermosome subunit; gro 100.0 4E-103 1E-107 832.6 40.6 474 46-525 1-482 (500)
23 1we3_A CPN60(groel); chaperoni 100.0 5.2E-95 1.8E-99 774.1 43.6 463 13-525 5-531 (543)
24 1kp8_A Groel protein; chaperon 100.0 6E-94 2.1E-98 764.5 40.4 459 13-523 5-527 (547)
25 1iok_A Chaperonin 60; chaperon 100.0 6.7E-95 2.3E-99 772.6 32.1 460 13-523 6-529 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 1.1E-93 3.6E-98 760.4 33.3 460 13-525 5-527 (546)
27 1gml_A T-complex protein 1 sub 100.0 1.2E-36 4E-41 278.8 17.4 172 204-376 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 2.2E-31 7.5E-36 238.9 12.8 153 210-363 1-154 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 98.3 5.9E-06 2E-10 74.0 12.5 143 208-391 3-170 (194)
30 3osx_A 60 kDa chaperonin; alph 98.3 1.9E-05 6.4E-10 71.0 14.2 141 210-391 12-177 (201)
31 1srv_A Protein (groel (HSP60 c 98.1 1.5E-05 5E-10 68.1 9.5 118 212-357 1-142 (145)
32 2yx6_A Hypothetical protein PH 44.8 47 0.0016 26.8 6.4 53 272-325 54-106 (121)
33 1o13_A Probable NIFB protein; 44.8 47 0.0016 27.7 6.4 53 272-325 67-119 (136)
34 2wfb_A Putative uncharacterize 42.4 58 0.002 26.2 6.5 51 273-324 59-110 (120)
35 1eo1_A Hypothetical protein MT 39.1 66 0.0023 26.0 6.4 52 273-325 57-108 (124)
36 1rdu_A Conserved hypothetical 35.6 64 0.0022 25.7 5.7 52 273-325 54-105 (116)
37 2re2_A Uncharacterized protein 30.1 95 0.0032 25.7 6.0 51 273-325 71-121 (136)
38 2ooa_A E3 ubiquitin-protein li 26.5 1.2E+02 0.0043 20.6 4.7 35 106-140 13-50 (52)
39 2ln3_A De novo designed protei 24.3 1.9E+02 0.0065 20.4 6.2 45 272-328 17-61 (83)
No 1
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1e-114 Score=924.13 Aligned_cols=510 Identities=69% Similarity=1.062 Sum_probs=490.7
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCC--CceEEccChHHHhhhccccChHHHHHHHHHhhhh
Q 009718 10 EANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQD 87 (527)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~--g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~ 87 (527)
+++.++|.++|.+|+.||+.|+++|||||||+||+|||+++ . |+++|||||+|||++|+++||+|+|++++|++||
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~--~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd 79 (513)
T 3iyg_B 2 GADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSS--GRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQD 79 (513)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecC--CCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhh
Confidence 56788999999999999999999999999999999999997 5 8999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccccc
Q 009718 88 DEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKIL 167 (527)
Q Consensus 88 ~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~ 167 (527)
+++||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++.+.+.+++.|.++++|+++||+.
T Consensus 80 ~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~ 159 (513)
T 3iyg_B 80 DEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLL 159 (513)
T ss_pred hhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999998733212367899999999999999
Q ss_pred chhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCCCCCccccCcceEEeeecccccccccc
Q 009718 168 SQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIY 247 (527)
Q Consensus 168 ~~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~Ill~~~~Le~~~~~~~ 247 (527)
++++++|++|+++|+.++++++|++.|+|+++.||+..||++++|++|++++.+.||+.++||||++++++|++++++..
T Consensus 160 ~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~m~~~~en~kIll~~~~Le~~k~e~~ 239 (513)
T 3iyg_B 160 THHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIF 239 (513)
T ss_pred ccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccceeEEeeEEEeccccCCCceeecCceEEEEcCCccccccccc
Confidence 99999999999999999998888899999999999999999999999999987679999999999999999999998833
Q ss_pred CeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCccc
Q 009718 248 GARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIA 327 (527)
Q Consensus 248 ~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ii 327 (527)
++++.+++++++.++.+.|+++++.++++|++.|++||+++++|++.+++||.++||++++++++.+|+|||++|||+++
T Consensus 240 ~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa~ii 319 (513)
T 3iyg_B 240 GSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGEIA 319 (513)
T ss_pred CCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCCEEe
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCCh
Q 009718 328 STFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGW 407 (527)
Q Consensus 328 ~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~ 407 (527)
++++++++.++|+|+.|++..+|+++|++|+||+++++|||+|||+|+.+++|+||+++||++++|++++++++|||||+
T Consensus 320 ~~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa 399 (513)
T 3iyg_B 320 STFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGC 399 (513)
T ss_pred cccccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCC
Q 009718 408 PEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELG 487 (527)
Q Consensus 408 ~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~g 487 (527)
+|++++.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+++.+|++.|.+++.++|||+.+|++.||++.|
T Consensus 400 ~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~g 479 (513)
T 3iyg_B 400 SEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLG 479 (513)
T ss_pred HHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhcc
Confidence 99999999999999899999999999999999999999999999999999999999988888999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCC
Q 009718 488 ISESFKVKQAVLLSATEAAEMILRVDEIITCAPR 521 (527)
Q Consensus 488 I~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~ 521 (527)
||||+.||+++|+.|+|+|++|||||++|...|+
T Consensus 480 I~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 480 ITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPR 513 (513)
T ss_pred CEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999998774
No 2
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.4e-114 Score=918.72 Aligned_cols=509 Identities=35% Similarity=0.546 Sum_probs=489.1
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhh
Q 009718 8 RDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQD 87 (527)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~ 87 (527)
++|++.++|.+++.+|+.||+.|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|+
T Consensus 1 ~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd 78 (515)
T 3iyg_H 1 KEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGR--GKATISNDGATILKLLDVVHPAAKTLVDIAKSQD 78 (515)
T ss_pred CCCccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCC--CCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhh
Confidence 57888999999999999999999999999999999999999997 9999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCc-hhhhHHHHHHHHHHhhcccc
Q 009718 88 DEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKEN-AETFKSDLMKIAMTTLSSKI 166 (527)
Q Consensus 88 ~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~-~~~~~~~l~~i~~t~l~sK~ 166 (527)
+++||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++.+ .+..++.|.++++|+++||+
T Consensus 79 ~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~ 158 (515)
T 3iyg_H 79 AEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKL 158 (515)
T ss_pred ceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999999998632 22225678999999999999
Q ss_pred cchhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCC----CCCccccCcceEEeeeccccc
Q 009718 167 LSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI----GQPKRIENAKILVANTAMDTD 242 (527)
Q Consensus 167 ~~~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~----~~~~~~~n~~Ill~~~~Le~~ 242 (527)
.+.++++|++++++|+.++++++|++.|+|.++.||+..||++++|++|++++.+ .+|+.++||||++++++|+++
T Consensus 159 ~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~ 238 (515)
T 3iyg_H 159 ISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELK 238 (515)
T ss_pred ccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEccccccc
Confidence 9999999999999999999888888999999999999999999999999999753 358999999999999999999
Q ss_pred cccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHh
Q 009718 243 KVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 322 (527)
Q Consensus 243 ~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~t 322 (527)
+++.. +++.+++++++.++.+.|+++++.++++|.+.|++||+++++|+|.+++||.++||++++++++++|+|||++|
T Consensus 239 k~e~~-~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~t 317 (515)
T 3iyg_H 239 AEKDN-AEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMAC 317 (515)
T ss_pred ccccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHHh
Confidence 99884 78999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccc
Q 009718 323 GGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVL 402 (527)
Q Consensus 323 Ga~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vv 402 (527)
||+++++++++++.++|+|+.|++..+|+++|++|++|+++++|||+|||+|+.+++|+||+++||++++|++++++++|
T Consensus 318 Ga~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iV 397 (515)
T 3iyg_H 318 GGSIQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVV 397 (515)
T ss_pred CCEEeeccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccc
Q 009718 403 FGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGD 482 (527)
Q Consensus 403 pGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d 482 (527)
||||++|++++.+|++++.+.++++|+++++|++||+.|||+||+|||+|+.+++.+|++.|.+++.++|||+.+|++.|
T Consensus 398 pGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d 477 (515)
T 3iyg_H 398 AGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIAD 477 (515)
T ss_pred cCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999877788999999999999
Q ss_pred cccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcC
Q 009718 483 MAELGISESFKVKQAVLLSATEAAEMILRVDEIITCA 519 (527)
Q Consensus 483 ~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~ 519 (527)
|++.|||||+.||+++|+.|+|+|+||||||++|.+.
T Consensus 478 m~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 478 NFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred cHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999864
No 3
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.4e-113 Score=916.82 Aligned_cols=505 Identities=37% Similarity=0.570 Sum_probs=482.0
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhcc
Q 009718 10 EANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDE 89 (527)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~ 89 (527)
+++.++|.++|.+|+.||+.|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|+++
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~--g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e 79 (529)
T 3iyg_A 2 FGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDI--GDVTITNDGATILKLLEVEHPAAKVLCELADLQDKE 79 (529)
T ss_pred CcchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCC--CCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhh
Confidence 356789999999999999999999999999999999999997 999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhh-cccccCCchhhhHHHHHHHHHHhhcccccc
Q 009718 90 VGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQ-KVVDNKENAETFKSDLMKIAMTTLSSKILS 168 (527)
Q Consensus 90 ~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~ 168 (527)
+||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|++ +++|++..+ ++.|.++++|+++||+.+
T Consensus 80 ~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~---~e~l~~va~tsl~sK~~~ 156 (529)
T 3iyg_A 80 VGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELG---RDCLINAAKTSMSSKVIG 156 (529)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC---HHHHHHHHHHHhccCccc
Confidence 9999999999999999999999999999999999999999999999998 999886421 578999999999999999
Q ss_pred hhhhHHHHHHHHHHHhhc---c----CCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeeccc
Q 009718 169 QDKEHFGQLAVDAVMRLK---G----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMD 240 (527)
Q Consensus 169 ~~~~~l~~li~~a~~~~~---~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~Le 240 (527)
+++++|++|+++|+.+++ + ++++++|+|.++.|+++.||++++|++|++++. ++||+.++||||++++|+|+
T Consensus 157 ~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le 236 (529)
T 3iyg_A 157 INGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQ 236 (529)
T ss_pred ccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccCCcccCCceEEEecCCcc
Confidence 999999999999999986 2 245678999999999999999999999999974 56999999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009718 241 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 320 (527)
Q Consensus 241 ~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~ 320 (527)
+++++. ++++.+++++++..+.+.|+++++.++++|++.|++||+++++|++.+++||.++||++++++++++|+|||+
T Consensus 237 ~~k~e~-~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~ 315 (529)
T 3iyg_A 237 KTKMKL-GVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAK 315 (529)
T ss_pred cccccC-CceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHH
Confidence 999887 4889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCccccccCCCC------CCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHH
Q 009718 321 VTGGEIASTFDNPE------SVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQ 394 (527)
Q Consensus 321 ~tGa~ii~~~~~l~------~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~ 394 (527)
+|||++++++++++ +.++|+|+.|++..+|+++|++|+||+++++|||+|||+|+.+++|.||+++||++++|+
T Consensus 316 ~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~ 395 (529)
T 3iyg_A 316 ASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKR 395 (529)
T ss_pred HhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987665 567999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCC------
Q 009718 395 TVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEG------ 468 (527)
Q Consensus 395 ~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~------ 468 (527)
+++++++|||||++|++||.+|++++.+.++++|+++++||+|||.||++||+|||+|+.+++.+|++.|.+++
T Consensus 396 ~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~ 475 (529)
T 3iyg_A 396 VLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERK 475 (529)
T ss_pred HhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997765
Q ss_pred --CcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCC
Q 009718 469 --CPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAP 520 (527)
Q Consensus 469 --~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~ 520 (527)
.++|||+.+|++.||++.|||||+.||+++|+.|+|+|+||||||++|...|
T Consensus 476 ~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~ 529 (529)
T 3iyg_A 476 NLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHP 529 (529)
T ss_pred cCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCCC
Confidence 6799999999999999999999999999999999999999999999998854
No 4
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=2e-114 Score=926.59 Aligned_cols=514 Identities=35% Similarity=0.583 Sum_probs=480.4
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+|+++++..+|.++|.+|+.||+.|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++
T Consensus 18 ~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~ 95 (553)
T 3ko1_A 18 ILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSL--GDITITNDGATILDKMDLQHPAAKLLVQIAKG 95 (553)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTT--SCEEEECCHHHHHHSSCCCSHHHHHHHHHHHT
T ss_pred EEecCcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhc--cceEEecCccchhhhhhccChhHHHHHHHhhC
Confidence 7899999999999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
||+++||||||++|||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++..+ ++.|.++++|+++||
T Consensus 96 qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d---~e~L~~vA~tsl~sK 172 (553)
T 3ko1_A 96 QDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSIND---TDLLRKIAMTSLSSK 172 (553)
T ss_dssp CSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTC---HHHHHHHHHHHHTTS
T ss_pred CcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCc---HHHHHHHHHHHhhHH
Confidence 99999999999999999999999999999999999999999999999999999999986421 578999999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhccC------CCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeec
Q 009718 166 ILSQDKEHFGQLAVDAVMRLKGS------TNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTA 238 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~~~------~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~ 238 (527)
+.+.++++|++|+++|+.+++++ +++++|+|.+..|+++.+|++++|++|++++. +.||+.++||||++++|+
T Consensus 173 ~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~d~~ 252 (553)
T 3ko1_A 173 AVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIALIDAS 252 (553)
T ss_dssp SCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCBSCEEEEECSC
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCccccccceEEEecCc
Confidence 99999999999999999999753 67889999999999999999999999999974 569999999999999999
Q ss_pred cccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHH
Q 009718 239 MDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERL 318 (527)
Q Consensus 239 Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~l 318 (527)
|++++++.+ +++.+++++++.++.+.|+++++.++++|++.|++||+++++|++.+++||.++||++++++++++|+||
T Consensus 253 Le~~k~e~~-~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~leri 331 (553)
T 3ko1_A 253 LEVEKPELD-AEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKL 331 (553)
T ss_dssp BSCCCCTTT-CCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHHHHH
T ss_pred ccccCcccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhHHHH
Confidence 999998874 7789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhC
Q 009718 319 ALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVND 398 (527)
Q Consensus 319 a~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~ 398 (527)
|++|||+++++++++++.++|+|+.|++..+|+++|++|++|++++.|||+|||+|+.+++|+||+++||++++|+++++
T Consensus 332 a~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~ 411 (553)
T 3ko1_A 332 ARATGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALGTVADVIKD 411 (553)
T ss_dssp HTTTTCCEESCGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCeeecccccCChhhcchHHHHHHhhcCcceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCC-CcceEEccC
Q 009718 399 SRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEG-CPAGIDVIS 477 (527)
Q Consensus 399 ~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~-~~~Gid~~~ 477 (527)
+++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+++.+|++.|.+++ +++|||+.+
T Consensus 412 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~ 491 (553)
T 3ko1_A 412 GRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYA 491 (553)
T ss_dssp CEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTT
T ss_pred CceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeec
Confidence 9999999999999999999999888999999999999999999999999999999999999999887665 789999999
Q ss_pred CcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCCC
Q 009718 478 GSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRED 525 (527)
Q Consensus 478 g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~~ 525 (527)
|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|.+.++
T Consensus 492 g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~ 539 (553)
T 3ko1_A 492 GQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKKSGGE 539 (553)
T ss_dssp TEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECCC-------
T ss_pred CCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHHhhhhccCC
Confidence 999999999999999999999999999999999999999998876554
No 5
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.9e-113 Score=919.31 Aligned_cols=513 Identities=34% Similarity=0.563 Sum_probs=491.4
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+|+++++..+|.++|.+|+.||+.|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++
T Consensus 7 ~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~ 84 (543)
T 3ruv_A 7 VLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDL--GDVVVTNDGVTILREMSVEHPAAKMLIEVAKT 84 (543)
T ss_dssp SSCSSEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTT--SCEEEECCHHHHHHHSCCCCHHHHHHHHHHHH
T ss_pred eecCCcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCC--CCEEEECCHHHHHHHccCcCHHHHHHHHHHHH
Confidence 6799999999999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
|++++||||||++|||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++..+ ++.|.++++|+++||
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d---~~~L~~va~tsl~sK 161 (543)
T 3ruv_A 85 QEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQD---KEILTKIAMTSITGK 161 (543)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTC---HHHHHHHHHHHHHHT
T ss_pred HHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC---HHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999987421 578999999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhccC---CCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeecccc
Q 009718 166 ILSQDKEHFGQLAVDAVMRLKGS---TNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDT 241 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~~~---~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~Le~ 241 (527)
+.+.++++|++|+++|+.+++++ +++++|+|.+..|+++.+|++++|++|++++. +.||+.++||||++++++|++
T Consensus 162 ~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll~~~~Le~ 241 (543)
T 3ruv_A 162 GAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEI 241 (543)
T ss_dssp CGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEEEEEEEEESSCBSC
T ss_pred ccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccceeecceEEeccccCccccccccCcEEEEEcccccc
Confidence 99999999999999999999765 67889999999999999999999999999974 568999999999999999999
Q ss_pred ccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHH
Q 009718 242 DKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALV 321 (527)
Q Consensus 242 ~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~ 321 (527)
++++.+ +++.+++++++.++.+.|+++++.++++|++.|++||+++++|++.+++||.++||++++++++++|+|||++
T Consensus 242 ~k~e~~-~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ia~~ 320 (543)
T 3ruv_A 242 KETETD-AEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKA 320 (543)
T ss_dssp CCCSSC-CCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHH
T ss_pred cccccC-ceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHHHHHH
Confidence 998874 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCcc
Q 009718 322 TGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRV 401 (527)
Q Consensus 322 tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~v 401 (527)
|||+++++++++++.++|+|+.|++..+++++|++|++|++++.|||+|||+|+.+++|+||+++||++++|++++++++
T Consensus 321 tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~i 400 (543)
T 3ruv_A 321 TGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRI 400 (543)
T ss_dssp HCCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred hCCceecccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHh-cCCCcceEEccCCcc
Q 009718 402 LFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQ-KEGCPAGIDVISGSV 480 (527)
Q Consensus 402 vpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~-~~~~~~Gid~~~g~~ 480 (527)
|||||++|++|+.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+++.+|++.|. ++++++|||+.+|++
T Consensus 401 VpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~ 480 (543)
T 3ruv_A 401 VSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAV 480 (543)
T ss_dssp EETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSE
T ss_pred ecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999997 677889999999999
Q ss_pred cccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCC
Q 009718 481 GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRE 524 (527)
Q Consensus 481 ~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~ 524 (527)
.||++.|||||+.||+++|+.|+|+|++|||||++|...|.+.+
T Consensus 481 ~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~ 524 (543)
T 3ruv_A 481 EDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLRGA 524 (543)
T ss_dssp EETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEEC-----
T ss_pred ccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheecCccCCC
Confidence 99999999999999999999999999999999999999886543
No 6
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-112 Score=909.06 Aligned_cols=504 Identities=29% Similarity=0.478 Sum_probs=481.5
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhcc
Q 009718 10 EANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDE 89 (527)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~ 89 (527)
|++.++|.+++.+|+.||+.|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++||++
T Consensus 1 ~~~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e 78 (515)
T 3iyg_G 1 NTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPM--GGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEE 78 (515)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCC--CCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhh
Confidence 356789999999999999999999999999999999999997 999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccch
Q 009718 90 VGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQ 169 (527)
Q Consensus 90 ~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~~ 169 (527)
+||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++..+ ++.|.++++|+++||..+.
T Consensus 79 ~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~---~~~l~~va~tsl~sK~i~~ 155 (515)
T 3iyg_G 79 VGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSN---RDTMLNIINSSITTKVISR 155 (515)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCC---HHHHHHHHHHHhcCCchhh
Confidence 9999999999999999999999999999999999999999999999999999987532 5789999999999999999
Q ss_pred hhhHHHHHHHHHHHhhcc------CCCcc-cceeEEeCCCCCCCceeeeeEEEeccCCC-CCCccccCcceEEeeecccc
Q 009718 170 DKEHFGQLAVDAVMRLKG------STNLE-SIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMDT 241 (527)
Q Consensus 170 ~~~~l~~li~~a~~~~~~------~~~~~-~I~i~~~~g~~~~dS~l~~Givl~~~~~~-~~~~~~~n~~Ill~~~~Le~ 241 (527)
+.+++++++++|+..+.. ++|++ +|+|.+++||+++||++++|++|++++.+ .||+.++||||++++|+|++
T Consensus 156 ~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~ 235 (515)
T 3iyg_G 156 WSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEY 235 (515)
T ss_pred HHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCCCcceeeeeEEEEEcccccc
Confidence 999999999999998762 13444 48999999999999999999999999754 69999999999999999999
Q ss_pred ccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHH
Q 009718 242 DKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALV 321 (527)
Q Consensus 242 ~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~ 321 (527)
++++.+ +++.+++++++.++.+.|++++++++++|++.+++||+++++|++.+++||.++||++++++++++|+|||++
T Consensus 236 ~k~e~~-~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~ 314 (515)
T 3iyg_G 236 KKGESQ-TDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARA 314 (515)
T ss_pred cccccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHH
Confidence 999874 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCccccccCCCCCCCCcc-cceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCc
Q 009718 322 TGGEIASTFDNPESVKLGH-CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSR 400 (527)
Q Consensus 322 tGa~ii~~~~~l~~~~lG~-~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~ 400 (527)
|||+++++++++++.++|+ |+.|++..+|+++|++|+||+++++|||+|||+|+.+++|.||+++||++++|+++++++
T Consensus 315 tGa~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ 394 (515)
T 3iyg_G 315 CGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQ 394 (515)
T ss_pred hCCeeeccccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcC-CCcceEEccCCc
Q 009718 401 VLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE-GCPAGIDVISGS 479 (527)
Q Consensus 401 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~-~~~~Gid~~~g~ 479 (527)
+|||||++|++++.+|++++...++++|+++++||+|||.|||+||+|||+|+.+++.+|++.|.++ +.++|||+.+|+
T Consensus 395 ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~ 474 (515)
T 3iyg_G 395 LVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGT 474 (515)
T ss_pred EEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999754 457899999999
Q ss_pred ccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcC
Q 009718 480 VGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCA 519 (527)
Q Consensus 480 ~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~ 519 (527)
+.||++.|||||+.||+++|+.|+|+|++|||||++|...
T Consensus 475 ~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 475 LVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred ccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 9999999999999999999999999999999999999764
No 7
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=2e-113 Score=920.22 Aligned_cols=514 Identities=35% Similarity=0.573 Sum_probs=479.4
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+|+++++..+|.++|.+|+.||..|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++
T Consensus 9 ~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~--g~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~ 86 (543)
T 1a6d_B 9 ILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSL--GDIVITNDGVTILKEMDVEHPAAKMMVEVSKT 86 (543)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTT--CCEEEECCHHHHHHHSCCCSHHHHHHHHHHTC
T ss_pred hcCCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCC--CCeEEeCCHHHHHHHhhccchHHHHHHHHHHh
Confidence 6799999999999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
|++++||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++..+ ++.|.++++|+|+||
T Consensus 87 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~---~~~l~~va~tsl~sK 163 (543)
T 1a6d_B 87 QDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADE---KALLLKMAQTSLNSK 163 (543)
T ss_dssp TTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTH---HHHHHHHHHHHHTTS
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999986532 578999999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhccC------CCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeec
Q 009718 166 ILSQDKEHFGQLAVDAVMRLKGS------TNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTA 238 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~~~------~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~ 238 (527)
+.++++++|++|+++|+.+++++ +|+++|+|.+++|++++||++++|++|++++. +.||+.++||||++++++
T Consensus 164 i~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~ 243 (543)
T 1a6d_B 164 SASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAP 243 (543)
T ss_dssp GGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSC
T ss_pred cccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCCcceecCCeEEEEecc
Confidence 99999999999999999999643 56788999999999999999999999999975 468999999999999999
Q ss_pred cccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHH
Q 009718 239 MDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERL 318 (527)
Q Consensus 239 Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~l 318 (527)
|++++++.. +++.+++++++..+.+.|+++++.++++|++.|++||+++++|++.+++||.++||++++++++++|+||
T Consensus 244 Le~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le~i 322 (543)
T 1a6d_B 244 LEIKKPEFD-TNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKL 322 (543)
T ss_dssp BSCCCCSSE-EEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHH
T ss_pred cccccccCC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHHHHH
Confidence 999998874 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhC
Q 009718 319 ALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVND 398 (527)
Q Consensus 319 a~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~ 398 (527)
|++|||+++++++++++.++|+|+.|++..+|+++|++|+||+++++|||+|||+|+.+++|+||+++||++++|+++++
T Consensus 323 a~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~ 402 (543)
T 1a6d_B 323 AKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALED 402 (543)
T ss_dssp HHHHTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCceecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCC
Q 009718 399 SRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG 478 (527)
Q Consensus 399 ~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g 478 (527)
+++|||||++|++++.+|++++...++++|+++++|++||+.||++||+|||+|+.+++.+|++.|.+++.++|||+.+|
T Consensus 403 ~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g 482 (543)
T 1a6d_B 403 GAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTG 482 (543)
T ss_dssp CEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTT
T ss_pred CCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCC
Confidence 99999999999999999999999899999999999999999999999999999999999999999987777899999999
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCCC
Q 009718 479 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRED 525 (527)
Q Consensus 479 ~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~~ 525 (527)
++.||.+.|||||+.||+++|+.|+|+|++|||||++|...|++.++
T Consensus 483 ~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~ 529 (543)
T 1a6d_B 483 EIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATKSSSSSS 529 (543)
T ss_dssp EEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC--------
T ss_pred cccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 99999999999999999999999999999999999999998865544
No 8
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=2.3e-114 Score=926.72 Aligned_cols=517 Identities=34% Similarity=0.533 Sum_probs=489.6
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+|+++++..+|.+++.+|+.||+.|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++
T Consensus 12 ~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~~ 89 (550)
T 3p9d_G 12 VLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSN--QKTTISNDGATILKLLDVVHPAAKTLVDISRA 89 (550)
T ss_dssp ----CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSS--SCEEEECCHHHHTTTSCCCSHHHHHHHHHHHH
T ss_pred hhcCCcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCC--CCeEEECCHHHHHHHccCCCHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
||+++||||||++|||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++..+..+++.|.++++|+++||
T Consensus 90 qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK 169 (550)
T 3p9d_G 90 QDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSK 169 (550)
T ss_dssp HHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHT
T ss_pred hhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCc
Confidence 99999999999999999999999999999999999999999999999999999999986532222467999999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhc-cCCCcccceeEEeCCCCCCCceeeeeEEEeccCCC----CCCccccCcceEEeeeccc
Q 009718 166 ILSQDKEHFGQLAVDAVMRLK-GSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI----GQPKRIENAKILVANTAMD 240 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~-~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~----~~~~~~~n~~Ill~~~~Le 240 (527)
+.+.++++|++|+++|+.+++ +++|+++|+|++++|++++||++++|++|++++.+ .||+.++||||++++++|+
T Consensus 170 ~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~kIll~~~~Le 249 (550)
T 3p9d_G 170 LIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNVELE 249 (550)
T ss_dssp TTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSCCEEEECSCCS
T ss_pred cccccHhHHHHHHHHHHHHhCccccCchheeEEEecCCCccceeEEeeEEEeccccccccccCcccccCceEEEeccccc
Confidence 999999999999999999998 67899999999999999999999999999999743 6899999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009718 241 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 320 (527)
Q Consensus 241 ~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~ 320 (527)
+++++. ++++.+++++++.++.+.|++++++++++|++.|++||+++++|++.+++||.++||++++++++++|+|||+
T Consensus 250 ~~k~e~-~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v~k~~lerIa~ 328 (550)
T 3p9d_G 250 LKAEKD-NAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSADDMNRVIQ 328 (550)
T ss_dssp CCCCSS-CEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECCCTTHHHHHHH
T ss_pred cccccc-cceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCcCHHHHHHHHH
Confidence 998877 4889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCc
Q 009718 321 VTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSR 400 (527)
Q Consensus 321 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~ 400 (527)
+||++++++++++++.++|+|+.|++..+++++|++|+||+++++|||+|||+|+.+++|+||+++||++++|+++++++
T Consensus 329 ~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~ 408 (550)
T 3p9d_G 329 AVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKL 408 (550)
T ss_dssp HTCCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HhCCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcc
Q 009718 401 VLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSV 480 (527)
Q Consensus 401 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~ 480 (527)
+|||||++|++++.+|++++...++++|+++++|++||+.||++||+|||+|+.+++.+|++.|.++++++|||+.+|++
T Consensus 409 iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~ 488 (550)
T 3p9d_G 409 IVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENI 488 (550)
T ss_dssp EEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSB
T ss_pred cccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999998788889999999999
Q ss_pred cccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCCC
Q 009718 481 GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRED 525 (527)
Q Consensus 481 ~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~~ 525 (527)
.||++.|||||+.||+++|+.|+|+|++|||||++|...|++++.
T Consensus 489 ~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~ 533 (550)
T 3p9d_G 489 GDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKGSESAN 533 (550)
T ss_dssp CCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCCCCC---
T ss_pred cchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCCCccccc
Confidence 999999999999999999999999999999999999998876553
No 9
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=4.8e-113 Score=917.17 Aligned_cols=513 Identities=37% Similarity=0.588 Sum_probs=491.7
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+|+++++..+|.++|.+|+.||..|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++
T Consensus 11 ~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~ 88 (548)
T 1q3q_A 11 ILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSL--GDIVVTNDCATILDKIDLQHPAAKMMVEVAKT 88 (548)
T ss_dssp CSCTTCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTT--CCEEEESCHHHHHHHSCCCSHHHHHHHHHHHH
T ss_pred cccCCcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCC--CCeEEECCHHHHHHHhhccchHHHHHHHHHHh
Confidence 6899999999999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
|++++||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++..+ ++.|.++++|+++||
T Consensus 89 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d---~~~l~~va~tsl~sK 165 (548)
T 1q3q_A 89 QDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDD---EETLLKIAATSITGK 165 (548)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTC---HHHHHHHHHHHSCSS
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999986422 578999999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhccC------CCcccceeEEeCCCCCCCceeeeeEEEeccCCC-CCCccccCcceEEeeec
Q 009718 166 ILSQDKEHFGQLAVDAVMRLKGS------TNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTA 238 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~~~------~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~-~~~~~~~n~~Ill~~~~ 238 (527)
+.++++++|++|+++|+.+++++ +|+++|+|.+++|++++||++++|++|++++.+ .||+.++||||++++++
T Consensus 166 i~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~ 245 (548)
T 1q3q_A 166 NAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEA 245 (548)
T ss_dssp TTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESSEEEEEECSC
T ss_pred ccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCCcceecCCEEEEEecC
Confidence 99999999999999999999643 577899999999999999999999999999754 68999999999999999
Q ss_pred cccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHH
Q 009718 239 MDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERL 318 (527)
Q Consensus 239 Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~l 318 (527)
|++++++.. +++.+++++++..+.+.|+++++.++++|++.+++||+++++|++.+++||.++||++++++++++|+||
T Consensus 246 Le~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~i 324 (548)
T 1q3q_A 246 LEVKKTETD-AKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKL 324 (548)
T ss_dssp BSCCCCSSC-CCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHH
T ss_pred cCcccccCC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHHHHHH
Confidence 999998874 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhC
Q 009718 319 ALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVND 398 (527)
Q Consensus 319 a~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~ 398 (527)
|++|||+++++++++++.++|+|+.|++..+++++|++|++|+++++|||+|||+|+.+++|.||+++||++++|+++++
T Consensus 325 a~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~ 404 (548)
T 1q3q_A 325 AKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMED 404 (548)
T ss_dssp HHHHCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHhCCeEecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCC
Q 009718 399 SRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG 478 (527)
Q Consensus 399 ~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g 478 (527)
+++|||||++|++++.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+++.+|++.|.+++.++|||..+|
T Consensus 405 ~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g 484 (548)
T 1q3q_A 405 GAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEG 484 (548)
T ss_dssp CEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTT
T ss_pred CCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCC
Confidence 99999999999999999999998889999999999999999999999999999999999999999976677899999999
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCC
Q 009718 479 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRE 524 (527)
Q Consensus 479 ~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~ 524 (527)
++.||++.|||||+.||+++|+.|+|+|++|||||++|...|++++
T Consensus 485 ~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~ 530 (548)
T 1q3q_A 485 KPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATKPE 530 (548)
T ss_dssp EEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECCC----
T ss_pred CccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCC
Confidence 9999999999999999999999999999999999999999886543
No 10
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=2e-114 Score=925.69 Aligned_cols=522 Identities=62% Similarity=0.957 Sum_probs=494.0
Q ss_pred CcccccccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccc-cCCCCceEEccChHHHhhhccccChHHHHH
Q 009718 1 MGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQS-TGRGREVTVTNDGATILKSLHIDNPAAKVL 79 (527)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~-~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll 79 (527)
|+++ +|+++++..+|+++|.+|+.||+.|+++|||||||+||+|||++ +. |+++|||||+|||++|+++||+|+|+
T Consensus 1 ~~~~-~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~--G~~~iTnDG~tIlk~i~~~hP~Akll 77 (527)
T 3p9d_B 1 MSVQ-IFGDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASS--NTCMVTNDGATILKSIPLDNPAAKVL 77 (527)
T ss_dssp --CC-SSCSCEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTT--CCEECCCCHHHHHHTCCCCCHHHHHH
T ss_pred Ccee-hhcCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCC--CCeEEeCCHHHHHHHhccCCHHHHHH
Confidence 7788 89999999999999999999999999999999999999999999 76 99999999999999999999999999
Q ss_pred HHHHhhhhcccCCChhHHHHHHHHHHHHHHHHHHc-CCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHH
Q 009718 80 VDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAA-KIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIA 158 (527)
Q Consensus 80 ~~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~-gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~ 158 (527)
+++|++|++++||||||+++||++||+++.+++.+ |+||+.|++||+.|++.+++.|+++++|++.+++.+++.|.+++
T Consensus 78 ~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA 157 (527)
T 3p9d_B 78 VNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIA 157 (527)
T ss_dssp HHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999999999999999999998765334457899999
Q ss_pred HHhhcccccchhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCCCCCccccCcceEEeeec
Q 009718 159 MTTLSSKILSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTA 238 (527)
Q Consensus 159 ~t~l~sK~~~~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~Ill~~~~ 238 (527)
+|+++||+.+.++++|++|+++|+.+++++++++.|+|.++.||++.||++++|++|++++.+..|++++||||++++|+
T Consensus 158 ~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~p~~~~n~kIlll~~~ 237 (527)
T 3p9d_B 158 KTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQPKRIENAKILIANTT 237 (527)
T ss_dssp HHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSCCSCCSSCEEEEECSC
T ss_pred HhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCccccEEEEeEEEecccCCCCCeeeecceEEEeccc
Confidence 99999999999999999999999999998888889999999999999999999999999986555899999999999999
Q ss_pred cccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHH
Q 009718 239 MDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERL 318 (527)
Q Consensus 239 Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~l 318 (527)
|++++++..+.++.+++++++..+.+.|+++++.++++|++.|++||+++++|++.+++||.++||++++++++.+|+||
T Consensus 238 le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~i 317 (527)
T 3p9d_B 238 LDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERL 317 (527)
T ss_dssp SSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHH
T ss_pred cccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHH
Confidence 99999885457788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhC
Q 009718 319 ALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVND 398 (527)
Q Consensus 319 a~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~ 398 (527)
|++|||+++++++++++.++|+|+.|++..+++++|++|+||+++++|||+|||+|+.+++|+||+++||++++|+++++
T Consensus 318 a~~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~ 397 (527)
T 3p9d_B 318 ALVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKE 397 (527)
T ss_dssp HHHTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHC
T ss_pred HHHhCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCC
Q 009718 399 SRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG 478 (527)
Q Consensus 399 ~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g 478 (527)
+++|||||++|++++.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+++.+|++.|.++++++|||+.+|
T Consensus 398 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 477 (527)
T 3p9d_B 398 TRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNG 477 (527)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSST
T ss_pred CCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCC
Confidence 99999999999999999999998889999999999999999999999999999999999999999988888899999999
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCCC
Q 009718 479 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRED 525 (527)
Q Consensus 479 ~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~~ 525 (527)
++.||++.|||||+.||+++|+.|+|+|++|||||++|...|+++..
T Consensus 478 ~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 524 (527)
T 3p9d_B 478 TIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRARPRTANR 524 (527)
T ss_dssp TCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC------
T ss_pred CCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcccCC
Confidence 99999999999999999999999999999999999999998866544
No 11
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.9e-112 Score=903.92 Aligned_cols=503 Identities=34% Similarity=0.537 Sum_probs=483.6
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhccc
Q 009718 11 ANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEV 90 (527)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~ 90 (527)
.+.++|.++|.+|+.||+.|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++
T Consensus 4 ~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~ 81 (518)
T 3iyg_D 4 QDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGK--GDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEA 81 (518)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCC--CCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhh
Confidence 45678999999999999999999999999999999999997 9999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccchh
Q 009718 91 GDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQD 170 (527)
Q Consensus 91 GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~ 170 (527)
||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++..+ ++.|.++++|+++||+.+.|
T Consensus 82 GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~---~~~l~~vA~tsl~sK~~~~~ 158 (518)
T 3iyg_D 82 GDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSD---RETLLNSAATSLNSKVVSQY 158 (518)
T ss_pred CCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCC---hHHHHHHhHhhhccccchhh
Confidence 999999999999999999999999999999999999999999999999999986421 57899999999999999999
Q ss_pred hhHHHHHHHHHHHhhcc-----CCCcccceeEEeCCCCCCCceeeeeEEEeccCCCCCCccccCcceEEeeecccccccc
Q 009718 171 KEHFGQLAVDAVMRLKG-----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVK 245 (527)
Q Consensus 171 ~~~l~~li~~a~~~~~~-----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~Ill~~~~Le~~~~~ 245 (527)
.++|++|+++|+.++++ .+++++|+|.++.||+..||++++|++|++++.+.||++++||||++++|+|++++++
T Consensus 159 ~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~~mp~~i~n~kIlll~~~Le~~k~~ 238 (518)
T 3iyg_D 159 SSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTD 238 (518)
T ss_pred HHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEecccccCCCccccCceEEEEEeeccccccc
Confidence 99999999999999864 3667889999999999999999999999999866899999999999999999999988
Q ss_pred ccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEe-----CccCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009718 246 IYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVN-----RQLIYNFPEELFADAGILAIEHADFDGIERLAL 320 (527)
Q Consensus 246 ~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~-----~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~ 320 (527)
. +.++.+++++++..+.+.|+++++.++++|.+.|+++|++ +++|++.+++||.++||++++++++.+|+|||+
T Consensus 239 ~-~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~ 317 (518)
T 3iyg_D 239 M-DNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICK 317 (518)
T ss_pred c-CceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHH
Confidence 5 5789999999999999999999999999999999999999 789999999999999999999999999999999
Q ss_pred HhCCccccccCCCCCCCCcccceEEEEEEcC-eEEEEEecCCC-CceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhC
Q 009718 321 VTGGEIASTFDNPESVKLGHCKLIEEIMIGE-DKLIHFSGVEM-GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVND 398 (527)
Q Consensus 321 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~-~~~~~~~~~~~-~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~ 398 (527)
+|||+++++++++++.++|+|+.|++..+++ ++|++|++|++ +++|||+|||+|+.+++|+||+++||++++|+++++
T Consensus 318 ~tGa~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~ 397 (518)
T 3iyg_D 318 TIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKK 397 (518)
T ss_pred HhCCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999 89999999988 899999999999999999999999999999999999
Q ss_pred CccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCC
Q 009718 399 SRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG 478 (527)
Q Consensus 399 ~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g 478 (527)
+++|||||++|++++.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+++.+|++.|.++++++|||+.+|
T Consensus 398 ~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g 477 (518)
T 3iyg_D 398 RALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKG 477 (518)
T ss_pred CCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888899999999
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcC
Q 009718 479 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCA 519 (527)
Q Consensus 479 ~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~ 519 (527)
++.||++.|||||+.||+++|+.|+|+|++|||||++|+++
T Consensus 478 ~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 478 GISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR 518 (518)
T ss_pred cccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEecC
Confidence 99999999999999999999999999999999999999864
No 12
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.8e-112 Score=913.59 Aligned_cols=513 Identities=35% Similarity=0.535 Sum_probs=491.1
Q ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhh
Q 009718 7 FRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQ 86 (527)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~ 86 (527)
|+++.+..+|.++|.+|+.||..|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|
T Consensus 13 ~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~q 90 (559)
T 3p9d_A 13 LFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDI--GDFTVTNDGATILSLLDVQHPAGKILVELAQQQ 90 (559)
T ss_dssp CCSSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSS--SCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHH
T ss_pred hhccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCC--CCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 788889999999999999999999999999999999999999997 999999999999999999999999999999999
Q ss_pred hcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhh-cccccCCchhhhHHHHHHHHHHhhccc
Q 009718 87 DDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQ-KVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 87 ~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
++++||||||++|||++||+++.+++.+|+||+.|++||+.|++.+++.|++ +++|++..+ ++.|.++++|+++||
T Consensus 91 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~---~e~L~~vA~tsl~sK 167 (559)
T 3p9d_A 91 DREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLG---KETLINIAKTSMSSK 167 (559)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC-----CTTHHHHHHHTTSSS
T ss_pred HHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC---HHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999 999987521 357999999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhc-------cCCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCcccc--CcceEEe
Q 009718 166 ILSQDKEHFGQLAVDAVMRLK-------GSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIE--NAKILVA 235 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~-------~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~--n~~Ill~ 235 (527)
+.++++++|++|+++|+.+++ +.+++++|+|++++|++++||++++|++|++++. +.||+.++ ||||+++
T Consensus 168 ~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ie~~n~kIll~ 247 (559)
T 3p9d_A 168 IIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACL 247 (559)
T ss_dssp GGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTSCSEECSSSBCEEEE
T ss_pred cccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCcceeeccCCceEEEE
Confidence 999999999999999999997 2367889999999999999999999999999975 46999999 9999999
Q ss_pred eeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhH
Q 009718 236 NTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGI 315 (527)
Q Consensus 236 ~~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L 315 (527)
+|+|++++++. ++++.+++++++..+.+.|+++++.++++|++.|++||+++++|++.+++||.++||++++++++++|
T Consensus 248 ~~~Le~~k~e~-~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~l 326 (559)
T 3p9d_A 248 DLNLQKARMAM-GVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDL 326 (559)
T ss_dssp TTCCSCCCCCT-TCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHHH
T ss_pred ecccccccccc-CceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHHH
Confidence 99999999887 47899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCcccccc------CCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHH
Q 009718 316 ERLALVTGGEIASTF------DNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDAL 389 (527)
Q Consensus 316 ~~la~~tGa~ii~~~------~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal 389 (527)
+|||++|||++++++ +++++.++|+|+.|++..+++++|++|+||+++++|||+|||+|+.+++|+||+++||+
T Consensus 327 e~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAL 406 (559)
T 3p9d_A 327 RRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSL 406 (559)
T ss_dssp HHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSSCCCCEEEEESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCCCHHHHHHHHHHHHHHH
Confidence 999999999999998 78889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCC
Q 009718 390 CVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGC 469 (527)
Q Consensus 390 ~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~ 469 (527)
+++|++++++++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+++.+|++.|.+++.
T Consensus 407 ~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~ 486 (559)
T 3p9d_A 407 SVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQM 486 (559)
T ss_dssp HHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSC
T ss_pred HHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999977655
Q ss_pred ------------cceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCCC
Q 009718 470 ------------PAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRED 525 (527)
Q Consensus 470 ------------~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~~ 525 (527)
++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|+++++
T Consensus 487 ~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 554 (559)
T 3p9d_A 487 AKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEPPKE 554 (559)
T ss_dssp CC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCCCCC
T ss_pred ccccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCccccc
Confidence 79999999999999999999999999999999999999999999999998876643
No 13
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.9e-112 Score=912.00 Aligned_cols=509 Identities=36% Similarity=0.578 Sum_probs=481.1
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+|+++++..+|+++|.+|+.||..|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++
T Consensus 10 ~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~ 87 (545)
T 1a6d_A 10 VLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSI--GDIIISNDGATILKEMDVEHPTAKMIVEVSKA 87 (545)
T ss_dssp -------CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSS--SCEEEECCHHHHHHHSCCCSHHHHHHHGGGGC
T ss_pred ccCCcchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCC--CCeEEeCcHHHHHHhhhccchHHHHHHHHHHh
Confidence 6799999999999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhccc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
|++++||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++| +.+ ++.|.++++|+|+||
T Consensus 88 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~----~~~l~~va~tsl~sK 162 (545)
T 1a6d_A 88 QDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STD----DATLRKIALTALSGK 162 (545)
T ss_dssp TTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCC----HHHHHHHHHHHTTTS
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCC----HHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999998 512 578999999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhccC------CCcccceeEEeCCCCCCCceeeeeEEEeccCCC-CCCccccCcceEEeeec
Q 009718 166 ILSQDKEHFGQLAVDAVMRLKGS------TNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTA 238 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~~~------~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~-~~~~~~~n~~Ill~~~~ 238 (527)
+.++++++|++|+++|+.+++++ +|+++|+|.+++|++++||++++|++|++++.+ .||+.++||||++++++
T Consensus 163 i~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~ 242 (545)
T 1a6d_A 163 NTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSA 242 (545)
T ss_dssp SCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEEEEEEECSC
T ss_pred cccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCCcceecCCEEEEEecC
Confidence 99999999999999999999643 667899999999999999999999999999754 68999999999999999
Q ss_pred cccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHH
Q 009718 239 MDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERL 318 (527)
Q Consensus 239 Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~l 318 (527)
|++++++.. +++.+++++++..+.+.|+++++.++++|++.+++||+++++|++.+++||.++||++++++++++|+||
T Consensus 243 Le~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~i 321 (545)
T 1a6d_A 243 LEIKKTEIE-AKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKL 321 (545)
T ss_dssp BSCCCCSSC-CEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHHH
T ss_pred CCcccccCC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHHH
Confidence 999998874 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhC
Q 009718 319 ALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVND 398 (527)
Q Consensus 319 a~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~ 398 (527)
|++|||+++++++++++.++|+|+.|++..+++++|++|++|+++++|||+|||+|+.+++|+||+++||++++|+++++
T Consensus 322 a~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~ 401 (545)
T 1a6d_A 322 AKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKED 401 (545)
T ss_dssp HHHHCCCEESSGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCeeecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCC
Q 009718 399 SRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG 478 (527)
Q Consensus 399 ~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g 478 (527)
+++|||||++|++++.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+++.+|++.|.+++.++|||..+|
T Consensus 402 g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g 481 (545)
T 1a6d_A 402 GKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNN 481 (545)
T ss_dssp CEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTT
T ss_pred CCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccC
Confidence 99999999999999999999999899999999999999999999999999999999999999999987777899999999
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCC
Q 009718 479 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRR 522 (527)
Q Consensus 479 ~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~ 522 (527)
++.||++.|||||+.||+++|+.|+|+|++|||||++|...|++
T Consensus 482 ~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 482 GVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKST 525 (545)
T ss_dssp EEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC------
T ss_pred ccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999999999999999999999999998765
No 14
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.6e-111 Score=897.83 Aligned_cols=500 Identities=29% Similarity=0.475 Sum_probs=481.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhccc
Q 009718 11 ANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEV 90 (527)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~ 90 (527)
++..+|.+++.+|+.||++|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++
T Consensus 3 ~~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~--g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~ 80 (517)
T 3iyg_Z 3 AEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGA--GDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDIT 80 (517)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCC--CCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHh
Confidence 45679999999999999999999999999999999999997 9999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccchh
Q 009718 91 GDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQD 170 (527)
Q Consensus 91 GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~ 170 (527)
||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++.+ ++.|.++++|+++||+.+.+
T Consensus 81 GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~----~~~L~~va~tsl~sKi~~~~ 156 (517)
T 3iyg_Z 81 GDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMD----RETLIDVARTSLRTKVHAEL 156 (517)
T ss_pred CCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCC----HHHHHHHHHHHhccccchhH
Confidence 99999999999999999999999999999999999999999999999999988643 57899999999999999999
Q ss_pred hhHHHHHHHHHHHhhcc---CCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeeccccccccc
Q 009718 171 KEHFGQLAVDAVMRLKG---STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKI 246 (527)
Q Consensus 171 ~~~l~~li~~a~~~~~~---~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~Le~~~~~~ 246 (527)
.++|++++++|+..+.+ ++++++|+|++++||+..||++++|++|++++. +.||+.++||+|++++++|++++++.
T Consensus 157 ~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e~ 236 (517)
T 3iyg_Z 157 ADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEV 236 (517)
T ss_pred HHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCccccceEeeEEEeccCCCCCccccccCCeEEEeccccccccccc
Confidence 99999999999998853 467889999999999999999999999999974 46999999999999999999999987
Q ss_pred cCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCe---------EEEeCccCCchHHHHHHHcCCeEEecCChhhHHH
Q 009718 247 YGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGIN---------CFVNRQLIYNFPEELFADAGILAIEHADFDGIER 317 (527)
Q Consensus 247 ~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~---------lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~ 317 (527)
+ +++.++++++++.+.+.|+++++.++++|++.+++ +|+++++|++.+++||.++||++++++++++|+|
T Consensus 237 ~-~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~ler 315 (517)
T 3iyg_Z 237 N-SGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMER 315 (517)
T ss_pred c-eeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHH
Confidence 5 78999999999999999999999999999988876 5999999999999999999999999999999999
Q ss_pred HHHHhCCccccccCCCCCCC-CcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHh
Q 009718 318 LALVTGGEIASTFDNPESVK-LGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTV 396 (527)
Q Consensus 318 la~~tGa~ii~~~~~l~~~~-lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~ 396 (527)
||++|||+++++++++++.+ +|+|+ |++..+|+++|++|++|++++.|||+|||+|+.+++|.||+++||++++|+++
T Consensus 316 ia~~tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av 394 (517)
T 3iyg_Z 316 LTLACGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAI 394 (517)
T ss_pred HHHHhCCEEecchhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 99999 99999999999999999999999999999999999999999999999999999
Q ss_pred hCCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEcc
Q 009718 397 NDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVI 476 (527)
Q Consensus 397 ~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~ 476 (527)
+++++|||||++|++++.+|++++.+.++++|+++++||+|||.+|++||+|||+|+.+++.+|++.|.+++.++|||+.
T Consensus 395 ~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~ 474 (517)
T 3iyg_Z 395 DDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLN 474 (517)
T ss_pred hcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCC
Confidence 99999999999999999999999998999999999999999999999999999999999999999999877889999999
Q ss_pred CCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhc
Q 009718 477 SGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITC 518 (527)
Q Consensus 477 ~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~ 518 (527)
+|++.||++.|||||+.||+++|+.|+|+|+||||||++|.+
T Consensus 475 ~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 475 TGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred CCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999976
No 15
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=5.4e-113 Score=919.35 Aligned_cols=515 Identities=27% Similarity=0.441 Sum_probs=475.7
Q ss_pred ccccchhhhhhh-HHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHH
Q 009718 5 RIFRDEANEEKG-ERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDIS 83 (527)
Q Consensus 5 ~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~ 83 (527)
.+|++|++.++| +++|.+|+.||+.|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|
T Consensus 12 ~~l~~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~ITnDG~TIlk~i~v~hP~Akll~e~a 89 (568)
T 3p9d_H 12 GLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHL--GKIIITNDAATMLRELDIVHPAVKVLVMAT 89 (568)
T ss_dssp SSCCSSCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTT--SCEEEESCHHHHTTTCCCCCHHHHHHHHHH
T ss_pred hhhhcCccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCC--CCeEEeCCHHHHHHHcccCCHHHHHHHHHH
Confidence 388999999988 68999999999999999999999999999999997 999999999999999999999999999999
Q ss_pred hhhhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhc
Q 009718 84 KVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLS 163 (527)
Q Consensus 84 ~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~ 163 (527)
++|++++||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++++..+. .+++.|.++++|+++
T Consensus 90 ~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~-~~~~~l~~va~tsl~ 168 (568)
T 3p9d_H 90 EQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDK-NDKNELLKMIKPVIS 168 (568)
T ss_dssp HHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCC-CTTHHHHHHHHHHHT
T ss_pred HhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCC-CCHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999998763210 114789999999999
Q ss_pred ccccchhhhHHHHHHHHHHHhhcc---------CCCcccceeEEeCCCCCCCceeeeeEEEeccCCCCCCcccc---Ccc
Q 009718 164 SKILSQDKEHFGQLAVDAVMRLKG---------STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIE---NAK 231 (527)
Q Consensus 164 sK~~~~~~~~l~~li~~a~~~~~~---------~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~---n~~ 231 (527)
||+.+++ ++|++|+++|+.++++ ++|+++|+|.+++|++++||++++|++|++++ ..||+.++ |||
T Consensus 169 sK~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~-~~m~~~i~~~~n~k 246 (568)
T 3p9d_H 169 SKKYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREP-EGHVKSLSEDKKHK 246 (568)
T ss_dssp TTSTTCH-HHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCB-SSGGGSCCCCSSCE
T ss_pred ccCcchH-HHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeecc-cCCcEEEecCCcce
Confidence 9999887 9999999999999865 26778999999999999999999999999997 47899999 999
Q ss_pred eEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCC
Q 009718 232 ILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHAD 311 (527)
Q Consensus 232 Ill~~~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~ 311 (527)
|++++|+|++++++.+ +++.+++++++.++.+.|+++++.++++|++.+++||+++++|++.+++||.++||+++++++
T Consensus 247 Illl~~~Le~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI~av~~v~ 325 (568)
T 3p9d_H 247 VAVFTCPLDIANTETK-GTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGILVLKVPS 325 (568)
T ss_dssp EEEECSCSSSCCCSSS-CEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTCEEECCCC
T ss_pred EEEEccCccccccccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCeEEEecCC
Confidence 9999999999998874 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCC--CCceeEEeecCCcHhHHHHHHHHHHHHH
Q 009718 312 FDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVE--MGQACTIVLRGASHHVLDEAERSLHDAL 389 (527)
Q Consensus 312 ~~~L~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~--~~~~~TIll~G~t~~~l~e~~~~i~dal 389 (527)
+.+|+|||++|||+++++++++++.++|+|+.|++..+|+++|++|++|+ ++++|||+|||+|+.+++|.||+++||+
T Consensus 326 ~~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~er~i~DAL 405 (568)
T 3p9d_H 326 KFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDGV 405 (568)
T ss_dssp HHHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998 6899999999999999999999999999
Q ss_pred HHHHHHhh--CCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhc-
Q 009718 390 CVLSQTVN--DSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQK- 466 (527)
Q Consensus 390 ~~~~~~~~--~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~- 466 (527)
+++|++++ ++++|||||++|++|+.+|++++.+.++++|+++++||+|||.||++||+|||+|+.+++.+|++.|.+
T Consensus 406 ~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~ 485 (568)
T 3p9d_H 406 AAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVT 485 (568)
T ss_dssp HHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCS
T ss_pred HHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhh
Confidence 99999998 899999999999999999999999999999999999999999999999999999999999999998865
Q ss_pred -------CCCcceEEccCCc---ccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCCC
Q 009718 467 -------EGCPAGIDVISGS---VGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRED 525 (527)
Q Consensus 467 -------~~~~~Gid~~~g~---~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~~ 525 (527)
+++++|||+.+|+ +.||++.|||||+.||+++|+.|+|+|++|||||++|...|...++
T Consensus 486 ~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~ 554 (568)
T 3p9d_H 486 EPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGPR 554 (568)
T ss_dssp SCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC----------------
T ss_pred cccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccCCCC
Confidence 5678999999997 9999999999999999999999999999999999999998876554
No 16
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.4e-110 Score=889.17 Aligned_cols=504 Identities=35% Similarity=0.524 Sum_probs=481.6
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhccc
Q 009718 11 ANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEV 90 (527)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~ 90 (527)
++..+|.++|.+|+.||+.|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++++
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~--g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~ 80 (515)
T 3iyg_E 3 KSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKD--GDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEI 80 (515)
T ss_pred chhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC--CCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhh
Confidence 45789999999999999999999999999999999999997 9999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccchh
Q 009718 91 GDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQD 170 (527)
Q Consensus 91 GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~ 170 (527)
||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|+..+. .+++.|.++++|+++||+.+.+
T Consensus 81 GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~-~~~~~l~~vA~tsl~sK~i~~~ 159 (515)
T 3iyg_E 81 GDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDM-KNTEPLIQTAKTTLGSKVVNSC 159 (515)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCc-cCHHHHHHHHHHHhcccchhHH
Confidence 999999999999999999999999999999999999999999999999999875421 1257899999999999999989
Q ss_pred hhHHHHHHHHHHHhhcc----CCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeecccccccc
Q 009718 171 KEHFGQLAVDAVMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVK 245 (527)
Q Consensus 171 ~~~l~~li~~a~~~~~~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~Le~~~~~ 245 (527)
.+.|++++++|+..+.+ ++++++|+|.+++||++.||++++|++|++++. +.||+.++||||++++|+|++.+++
T Consensus 160 ~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~ 239 (515)
T 3iyg_E 160 HRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPK 239 (515)
T ss_pred HHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEecccccccccccCCCceEEEEcCcccccccc
Confidence 99999999999998854 367889999999999999999999999999975 4699999999999999999999887
Q ss_pred ccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCc
Q 009718 246 IYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGE 325 (527)
Q Consensus 246 ~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ 325 (527)
. ++++.+++++++..+.+.|+++++.++++|.+.|++||+++++|++.+++||.++||++++++++++|+|||++|||+
T Consensus 240 ~-~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa~ 318 (515)
T 3iyg_E 240 T-KHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGGR 318 (515)
T ss_pred c-cceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCE
Confidence 7 378899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcccceEEEEEEcC--eEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCcccc
Q 009718 326 IASTFDNPESVKLGHCKLIEEIMIGE--DKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLF 403 (527)
Q Consensus 326 ii~~~~~l~~~~lG~~~~v~~~~i~~--~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvp 403 (527)
++++++++++.++|+|+.|+++.+|+ ++|++|+||++++.|||+|||+|+.+++|+||+++||++++|++++++++||
T Consensus 319 ii~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVp 398 (515)
T 3iyg_E 319 IVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVY 398 (515)
T ss_pred EecccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCC
Confidence 99999999999999999999999997 8999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhc-CCCcceEEccCCcccc
Q 009718 404 GGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQK-EGCPAGIDVISGSVGD 482 (527)
Q Consensus 404 GGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~-~~~~~Gid~~~g~~~d 482 (527)
|||++|++++.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+++.+|++.|.+ +++++|||+.+|++.|
T Consensus 399 GGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d 478 (515)
T 3iyg_E 399 GGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTND 478 (515)
T ss_pred CCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccc
Confidence 999999999999999999999999999999999999999999999999999999999999975 4578999999999999
Q ss_pred cccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhc
Q 009718 483 MAELGISESFKVKQAVLLSATEAAEMILRVDEIITC 518 (527)
Q Consensus 483 ~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~ 518 (527)
|++.|||||+.||+++|+.|+|+|++|||||++|++
T Consensus 479 ~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 479 MKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred hHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 999999999999999999999999999999999976
No 17
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=7.7e-112 Score=908.33 Aligned_cols=510 Identities=28% Similarity=0.471 Sum_probs=483.5
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhh
Q 009718 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKV 85 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 85 (527)
+|+++++..+|.++|.+|+.||..|+++|++||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++
T Consensus 7 ~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~ITnDG~TIlk~i~~~hP~Akll~e~a~~ 84 (590)
T 3p9d_C 7 FMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPM--GGLVLTNDGHAILREIDVAHPAAKSMLELSRT 84 (590)
T ss_dssp CSCTTCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTT--TCCBCCCCHHHHHHHSCCCCHHHHTHHHHTTT
T ss_pred eecCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCC--CCeEEECCHHHHHHHhhCCCHHHHHHHHHHHh
Confidence 7899999999999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred hhcccCCChhHHHHHHHHHHHHHHHH-HHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcc
Q 009718 86 QDDEVGDGTTSVVVLAGELLREAEKL-VAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSS 164 (527)
Q Consensus 86 ~~~~~GDGttt~vlL~~~Ll~~~~~l-i~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~s 164 (527)
|++++||||||+++||++||+++.++ +.+|+||+.|++||+.|++.+++.|+++++|++..+ ++.|.++++|+++|
T Consensus 85 qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~---~e~L~~vA~tslsS 161 (590)
T 3p9d_C 85 QDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVEN---DAAMKKLIQASIGT 161 (590)
T ss_dssp HHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCC---THHHHHHHTTTSTT
T ss_pred hhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCC---HHHHHHHHHHHHhc
Confidence 99999999999999999999999999 999999999999999999999999999999987532 36899999999999
Q ss_pred cccchhhhHHHHHHHHHHHhhccC------------CCcc-cceeEEeCCCCCCCceeeeeEEEeccCCC-CCCccccCc
Q 009718 165 KILSQDKEHFGQLAVDAVMRLKGS------------TNLE-SIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENA 230 (527)
Q Consensus 165 K~~~~~~~~l~~li~~a~~~~~~~------------~~~~-~I~i~~~~g~~~~dS~l~~Givl~~~~~~-~~~~~~~n~ 230 (527)
|+.++++++|++|+++|+.+++++ .|++ +|+|.+++||++.||++++|++|++++.+ .||+.++||
T Consensus 162 K~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m~~~~en~ 241 (590)
T 3p9d_C 162 KYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENP 241 (590)
T ss_dssp STTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTTSCSCEESC
T ss_pred ccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCCCcceeeee
Confidence 999999999999999999998753 2332 69999999999999999999999999754 699999999
Q ss_pred ceEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecC
Q 009718 231 KILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHA 310 (527)
Q Consensus 231 ~Ill~~~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v 310 (527)
||++++|+|++++++. ++++.+++++++.++.+.|++++++++++|++.+++||+++++|++.+++||.++||++++++
T Consensus 242 kIll~d~~Le~~K~e~-~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~av~~~ 320 (590)
T 3p9d_C 242 RVVLLDCPLEYKKGES-QTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRRV 320 (590)
T ss_dssp CEECCCCCCSCCCCTT-TEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCCCCCC
T ss_pred EEEEEccccccccccc-CceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccceeeccC
Confidence 9999999999999887 488899999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhCCccccccCCCCCCCCcc-cceEEEEEEcCeEEEEEecCCCCce------------------------
Q 009718 311 DFDGIERLALVTGGEIASTFDNPESVKLGH-CKLIEEIMIGEDKLIHFSGVEMGQA------------------------ 365 (527)
Q Consensus 311 ~~~~L~~la~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~i~~~~~~~~~~~~~~~~------------------------ 365 (527)
++.+|+|||++|||+++++++++++.++|+ |+.|++..+++++|++|+||++++.
T Consensus 321 ~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 400 (590)
T 3p9d_C 321 KKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIA 400 (590)
T ss_dssp CHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC------------------------------
T ss_pred CHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhh
Confidence 999999999999999999999999999999 9999999999999999999987666
Q ss_pred --------------------------------eEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHH
Q 009718 366 --------------------------------CTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMA 413 (527)
Q Consensus 366 --------------------------------~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la 413 (527)
|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++++
T Consensus 401 ~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s 480 (590)
T 3p9d_C 401 VSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVS 480 (590)
T ss_dssp ---------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHH
Confidence 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchH
Q 009718 414 KEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFK 493 (527)
Q Consensus 414 ~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~ 493 (527)
.+|++++...++++|+++++|++||+.||++||+|||+|+.+++.+|++.|.++++++|||+.+|++.||++.|||||+.
T Consensus 481 ~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~ 560 (590)
T 3p9d_C 481 VKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEV 560 (590)
T ss_dssp HHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHH
T ss_pred HHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHH
Confidence 99999999999999999999999999999999999999999999999999988888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHhHHhhcCCC
Q 009718 494 VKQAVLLSATEAAEMILRVDEIITCAPR 521 (527)
Q Consensus 494 vk~~~l~~A~~~a~~iL~iD~iI~~~~~ 521 (527)
||+++|+.|+|+|++|||||++|...|+
T Consensus 561 vk~~al~~A~e~a~~iL~id~ii~~~~~ 588 (590)
T 3p9d_C 561 IKQQSVKTAIESACLLLRVDDIVSGVRK 588 (590)
T ss_dssp HHHHHHHHHHHHHHHTTSEEEEECCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998764
No 18
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.2e-110 Score=888.70 Aligned_cols=502 Identities=28% Similarity=0.425 Sum_probs=477.6
Q ss_pred chhhhhhh-HHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhh
Q 009718 9 DEANEEKG-ERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQD 87 (527)
Q Consensus 9 ~~~~~~~~-~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~ 87 (527)
+|++..+| ++++.+|+.||+.|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|+
T Consensus 1 ~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd 78 (512)
T 3iyg_Q 1 EGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHL--EKLFVTNDAATILRELEVQHPAAKMIVMASHMQE 78 (512)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCC--CCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhh
Confidence 57888999 89999999999999999999999999999999997 9999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhccc--ccCCchhhhHHHHHHHHHHhhccc
Q 009718 88 DEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVV--DNKENAETFKSDLMKIAMTTLSSK 165 (527)
Q Consensus 88 ~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~--~~~~~~~~~~~~l~~i~~t~l~sK 165 (527)
+++||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++ +.+.. .++.|.++++|+++||
T Consensus 79 ~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~---~~~~l~~va~tsl~sK 155 (512)
T 3iyg_Q 79 QEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLR---DVDEVSSLLHTSVMSK 155 (512)
T ss_pred hhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC---CHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999854 22221 1478999999999999
Q ss_pred ccchhhhHHHHHHHHHHHhhccC---CCcccceeEEeCCCCCCCceeeeeEEEeccCCCCCCccccCcceEEeeeccccc
Q 009718 166 ILSQDKEHFGQLAVDAVMRLKGS---TNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTD 242 (527)
Q Consensus 166 ~~~~~~~~l~~li~~a~~~~~~~---~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~~~~~~~~n~~Ill~~~~Le~~ 242 (527)
+.+ ++++|++|+++|+.+++++ +++++|+|.+..|+++.+|++++|++|++++.+ ||+.++|++|++++|||++.
T Consensus 156 ~~~-~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~-~~~~~~n~kI~ll~~~le~~ 233 (512)
T 3iyg_Q 156 QYG-NEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG-DVTSVKDAKIAVYSCPFDGM 233 (512)
T ss_pred Ccc-chHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccceEEeeEEEecCcCC-CCcccccCceEEEecccccc
Confidence 765 6899999999999999653 577899999999999999999999999999854 99999999999999999998
Q ss_pred cccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHh
Q 009718 243 KVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 322 (527)
Q Consensus 243 ~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~t 322 (527)
+++.+ .++.+++++++.++.+.|++++++++++|++.|++||+++++|++.+++||.++||++++++++.+|+|||++|
T Consensus 234 ~~e~k-~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~t 312 (512)
T 3iyg_Q 234 ITETK-GTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKTV 312 (512)
T ss_pred ccccc-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHHh
Confidence 88775 67899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCC-CCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCcc
Q 009718 323 GGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVE-MGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRV 401 (527)
Q Consensus 323 Ga~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~-~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~v 401 (527)
||+++++++++++.++|+|+.|++..+|+++|++|++|+ .+++|||+|||+|+.+++|+||+++||++++|++++++++
T Consensus 313 Ga~iis~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~i 392 (512)
T 3iyg_Q 313 GATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRL 392 (512)
T ss_pred CCEEecccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 999999999999999999999999999999999999996 4789999999999999999999999999999999999999
Q ss_pred ccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCC--c
Q 009718 402 LFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG--S 479 (527)
Q Consensus 402 vpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g--~ 479 (527)
|||||++|++++.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+++.+|++.|.++++++|||+.+| +
T Consensus 393 VpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~ 472 (512)
T 3iyg_Q 393 VPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPA 472 (512)
T ss_pred ecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCc
Confidence 99999999999999999999899999999999999999999999999999999999999999988888999999965 9
Q ss_pred ccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhc
Q 009718 480 VGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITC 518 (527)
Q Consensus 480 ~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~ 518 (527)
+.||++.|||||+.||+++|+.|+|+|+||||||++|++
T Consensus 473 ~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~ 511 (512)
T 3iyg_Q 473 VKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMA 511 (512)
T ss_pred ccchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHheec
Confidence 999999999999999999999999999999999999976
No 19
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=6.5e-112 Score=904.63 Aligned_cols=513 Identities=32% Similarity=0.499 Sum_probs=487.7
Q ss_pred Cccc-ccccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHH
Q 009718 1 MGVE-RIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVL 79 (527)
Q Consensus 1 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll 79 (527)
|+.. +-++.+.+..+|.++|.+|+.||..|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+|+|+
T Consensus 1 ~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~akll 78 (528)
T 3p9d_D 1 MSAKVPSNATFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSR--GEIIISNDGHTILKQMAILHPVARML 78 (528)
T ss_dssp ------CCCSSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSS--CCEEEECCHHHHHHHSCCCCTTHHHH
T ss_pred CCCCcccccccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCC--CCeEEECCHHHHHHHcccCCHHHHHH
Confidence 4433 35677788899999999999999999999999999999999999997 99999999999999999999999999
Q ss_pred HHHHhhhhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHH
Q 009718 80 VDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAM 159 (527)
Q Consensus 80 ~~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~ 159 (527)
+++|++|++++||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++..+ ++.|.++++
T Consensus 79 ~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~---~e~l~~va~ 155 (528)
T 3p9d_D 79 VEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSD---REQLVRAAS 155 (528)
T ss_dssp HHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCC---HHHHHHHHH
T ss_pred HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCC---HHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999987421 578999999
Q ss_pred HhhcccccchhhhHHHHHHHHHHHhhcc----CCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CC-CCccccCcceE
Q 009718 160 TTLSSKILSQDKEHFGQLAVDAVMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IG-QPKRIENAKIL 233 (527)
Q Consensus 160 t~l~sK~~~~~~~~l~~li~~a~~~~~~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~-~~~~~~n~~Il 233 (527)
|+++||+.++|+++|++|+++|+.++++ .+++++|+|++++|++++||++++|++|++++. +. ||+.++||||+
T Consensus 156 tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIl 235 (528)
T 3p9d_D 156 TSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIG 235 (528)
T ss_dssp HHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEE
T ss_pred HHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCcccCcccccCceEE
Confidence 9999999999999999999999999964 467789999999999999999999999999975 34 99999999999
Q ss_pred EeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccC-----CchHHHHHHHcCCeEEe
Q 009718 234 VANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLI-----YNFPEELFADAGILAIE 308 (527)
Q Consensus 234 l~~~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I-----~~~~~~~l~~~~I~~i~ 308 (527)
+++++|++++++.+ +++.+++++++..+.+.|+++++.++++|.+.|++||+++++| ++.+++||.++||++++
T Consensus 236 l~~~~le~~k~~~~-~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~ 314 (528)
T 3p9d_D 236 LIQFQISPPKPDTE-NNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVK 314 (528)
T ss_dssp EECCCSSCCCCSSE-EEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEE
T ss_pred EEeccccccccccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEE
Confidence 99999999998874 8899999999999999999999999999999999999999999 99999999999999999
Q ss_pred cCChhhHHHHHHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCC--C-CceeEEeecCCcHhHHHHHHHHH
Q 009718 309 HADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVE--M-GQACTIVLRGASHHVLDEAERSL 385 (527)
Q Consensus 309 ~v~~~~L~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~--~-~~~~TIll~G~t~~~l~e~~~~i 385 (527)
++++++|+|||++|||+++++++++++.++|+|+.|++..+++++|++|++|+ + +++|||+|||+|+.+++|.||++
T Consensus 315 ~~~k~~le~ia~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i 394 (528)
T 3p9d_D 315 DIEREEIEFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSL 394 (528)
T ss_dssp CCCTHHHHHHHHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHCCEEecccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998 6 88999999999999999999999
Q ss_pred HHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHh
Q 009718 386 HDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQ 465 (527)
Q Consensus 386 ~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~ 465 (527)
+||++++|++++++++|||||++|++++.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+++.+|++.|.
T Consensus 395 ~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~ 474 (528)
T 3p9d_D 395 HDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHE 474 (528)
T ss_dssp TTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999998888999999999999999999999999999999999999999887
Q ss_pred cCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcC
Q 009718 466 KEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCA 519 (527)
Q Consensus 466 ~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~ 519 (527)
++++++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|+++
T Consensus 475 ~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 475 NGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp SSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBCC
T ss_pred ccCCccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHheecC
Confidence 778889999999999999999999999999999999999999999999999864
No 20
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=6.7e-112 Score=908.92 Aligned_cols=519 Identities=26% Similarity=0.427 Sum_probs=491.1
Q ss_pred CcccccccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHH
Q 009718 1 MGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLV 80 (527)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~ 80 (527)
|+++ +|+++++.++|.+++.+|+.||+.|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++
T Consensus 1 ~~~~-~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~akll~ 77 (546)
T 3p9d_F 1 MSLQ-LLNPKAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGA--GNIKLTKDGKVLLTEMQIQSPTAVLIA 77 (546)
T ss_dssp CCCC-SSCTTEEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTT--SCEEEECCHHHHHHTSCCCCHHHHHHH
T ss_pred Cccc-ccCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCC--CCEEEECCHHHHHHHccCcCHHHHHHH
Confidence 7788 8899999999999999999999999999999999999999999997 999999999999999999999999999
Q ss_pred HHHhhhhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHH
Q 009718 81 DISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMT 160 (527)
Q Consensus 81 ~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t 160 (527)
++|++|++++||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++.+. ..++.|.++++|
T Consensus 78 e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~-~~~~~L~~vA~t 156 (546)
T 3p9d_F 78 RAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLS-NDREFLLQVARS 156 (546)
T ss_dssp HHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSS-TTCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccc-cCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999875310 114789999999
Q ss_pred hhcccccchhhhHHHHHHHHHHHhhc----cCCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEe
Q 009718 161 TLSSKILSQDKEHFGQLAVDAVMRLK----GSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVA 235 (527)
Q Consensus 161 ~l~sK~~~~~~~~l~~li~~a~~~~~----~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~ 235 (527)
+++||+.+.+.++|++++++|+..+. .++++++|+|++++||+..||++++|++|++++. +.||+.++||||+++
T Consensus 157 sl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~ 236 (546)
T 3p9d_F 157 SLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLIL 236 (546)
T ss_dssp HTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSSSCSSBCSCCCCEE
T ss_pred HhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCccccEEEeeEEEecccccccCcceecCceEEEe
Confidence 99999999999999999999999875 3578899999999999999999999999999975 469999999999999
Q ss_pred eeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcC----------CeEEEeCccCCchHHHHHHHcCCe
Q 009718 236 NTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHG----------INCFVNRQLIYNFPEELFADAGIL 305 (527)
Q Consensus 236 ~~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~----------v~lvl~~~~I~~~~~~~l~~~~I~ 305 (527)
+|+|++++++.+ +++.+++++++..+.+.|++++++++++|++.+ ++||+++++|++.+++||.++||+
T Consensus 237 ~~~Le~~k~e~~-~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~ 315 (546)
T 3p9d_F 237 NVSLEYEKTEVN-SGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNIL 315 (546)
T ss_dssp CCCSSSCCCSSC-BCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCE
T ss_pred cCcccccccccC-ceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCe
Confidence 999999999874 779999999999999999999999999998754 249999999999999999999999
Q ss_pred EEecCChhhHHHHHHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCCceeEEeecCCcHhHHHHHHHHH
Q 009718 306 AIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSL 385 (527)
Q Consensus 306 ~i~~v~~~~L~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i 385 (527)
+++|+++++|+|||++|||+++++++++++.++|+|+.|++..+++++|++|+||++++.|||+|||+|+.+++|+||++
T Consensus 316 ~vr~v~~~~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l 395 (546)
T 3p9d_F 316 ALRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAV 395 (546)
T ss_dssp EECCCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHH
T ss_pred eEecCCHHHHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCccccCCChHHHHHHHHHHH---HHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHH
Q 009718 386 HDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDE---LARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRA 462 (527)
Q Consensus 386 ~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~---~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~ 462 (527)
+||++++|++++++++|||||++|++++.+|++ |+...++++|+++++|++||+.||++||+|||+|+.+++.+|++
T Consensus 396 ~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~ 475 (546)
T 3p9d_F 396 RDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVED 475 (546)
T ss_dssp HHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999 58888999999999999999999999999999999999999999
Q ss_pred HHhc-----CCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCCCCC
Q 009718 463 EHQK-----EGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRE 524 (527)
Q Consensus 463 ~~~~-----~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~~~~ 524 (527)
.|.+ ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|.+++....
T Consensus 476 ~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~~~ 542 (546)
T 3p9d_F 476 ELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRSTLK 542 (546)
T ss_dssp HHHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSSCC
T ss_pred HhhhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC
Confidence 9873 4568999999999999999999999999999999999999999999999999876544
No 21
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=2.2e-110 Score=897.99 Aligned_cols=513 Identities=35% Similarity=0.553 Sum_probs=484.0
Q ss_pred cccch--hhhhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChHHHHHHHHH
Q 009718 6 IFRDE--ANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDIS 83 (527)
Q Consensus 6 ~~~~~--~~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~ 83 (527)
+|+++ .+..+|.++|.+|+.||+.|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|
T Consensus 31 ~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a 108 (562)
T 3p9d_E 31 IVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPD--GEITITNDGATILSQMELDNEIAKLLVQLS 108 (562)
T ss_dssp CCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSS--SCEEEESCHHHHHHHSCCCSHHHHHHHHHH
T ss_pred EeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCC--CCEEEECCHHHHHHHccCCCHHHHHHHHHH
Confidence 45555 36678999999999999999999999999999999999997 999999999999999999999999999999
Q ss_pred hhhhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCch-hhhHHHHHHHHHHhh
Q 009718 84 KVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENA-ETFKSDLMKIAMTTL 162 (527)
Q Consensus 84 ~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~-~~~~~~l~~i~~t~l 162 (527)
++|++++||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++.+. +.+++.|.++++|++
T Consensus 109 ~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl 188 (562)
T 3p9d_E 109 KSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSL 188 (562)
T ss_dssp HHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHH
T ss_pred HHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999886531 122468999999999
Q ss_pred cccccchhhhHHHHHHHHHHHhhcc----CCCcccceeEEeCCCCCCCceeeeeEEEeccCC-CCCCccc------cCcc
Q 009718 163 SSKILSQDKEHFGQLAVDAVMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIG-IGQPKRI------ENAK 231 (527)
Q Consensus 163 ~sK~~~~~~~~l~~li~~a~~~~~~----~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~-~~~~~~~------~n~~ 231 (527)
+||+.+.+.++|++++++|+..+.+ ++++++|+|++++|++++||++++|++|++++. +.||+.+ +|++
T Consensus 189 ~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m~~~~~~~~~~~~~k 268 (562)
T 3p9d_E 189 GSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQMPKCVLPKEGSDGVK 268 (562)
T ss_dssp SSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTSCCC-----TTCSSCE
T ss_pred CCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCCcCcccccccccccce
Confidence 9999999999999999999998854 577889999999999999999999999999975 4689888 8999
Q ss_pred eEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCC
Q 009718 232 ILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHAD 311 (527)
Q Consensus 232 Ill~~~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~ 311 (527)
|++++|+|++.+.+.. +++.+++++++..+.+.|+++++.++++|++.|++||+++++|++.+++||.++||+++++++
T Consensus 269 Iall~~~le~~k~~~~-~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~~v~~v~ 347 (562)
T 3p9d_E 269 LAILTCPFEPPKPKTK-HKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRWVG 347 (562)
T ss_dssp ECEEESCCSSCCCSSC-CCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCCCEECCC
T ss_pred EEEecccccccccccC-ceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCEEEeccC
Confidence 9999999999988763 678899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhCCccccccCCCCCCCCcccceEEEEEEcC--eEEEEEecCCCCceeEEeecCCcHhHHHHHHHHHHHHH
Q 009718 312 FDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGE--DKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDAL 389 (527)
Q Consensus 312 ~~~L~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~--~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal 389 (527)
+++|+|||++|||+++++++++++.++|+|+.|++..+|+ ++|++|+||++++.|||+|||+|+.+++|+||+++||+
T Consensus 348 k~~le~ia~~TGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~kr~i~DAL 427 (562)
T 3p9d_E 348 GQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSL 427 (562)
T ss_dssp TTTHHHHHHHHCCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHTHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999985 89999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhc-CC
Q 009718 390 CVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQK-EG 468 (527)
Q Consensus 390 ~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~-~~ 468 (527)
+++|++++++++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+++.+|++.|.+ ++
T Consensus 428 ~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~ 507 (562)
T 3p9d_E 428 CVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKI 507 (562)
T ss_dssp HHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999975 45
Q ss_pred CcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhhcCCC
Q 009718 469 CPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPR 521 (527)
Q Consensus 469 ~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~~~~~ 521 (527)
+++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|.+++.
T Consensus 508 ~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 508 SNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp SSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred CceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 78999999999999999999999999999999999999999999999998664
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=3.9e-103 Score=832.63 Aligned_cols=474 Identities=34% Similarity=0.551 Sum_probs=380.4
Q ss_pred cccccCCCCceEEccChHHHhhhccccChHHHHHHHHHhhhhcccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Q 009718 46 ILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGF 125 (527)
Q Consensus 46 ~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~ 125 (527)
||+++. |+++|||||+|||++|+++||+|+|++++|++|++++||||||+++||++||+++.+++.+|+||+.|++||
T Consensus 1 mlv~~~--G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~ 78 (500)
T 3aq1_B 1 MLVDSM--GDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGY 78 (500)
T ss_dssp --------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred CccCCC--CCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 678886 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccchhhhHHHHHHHHHHHhhccC------CC-cccceeEE
Q 009718 126 RMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS------TN-LESIQIIK 198 (527)
Q Consensus 126 ~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~~~~l~~li~~a~~~~~~~------~~-~~~I~i~~ 198 (527)
+.|++.+++.|+++++|++..+ ++.|.++++|+|+||+.++|+++|++|+++|+.+++++ +| +++|+|.+
T Consensus 79 ~~A~~~a~~~L~~~s~~v~~~d---~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k 155 (500)
T 3aq1_B 79 RHAAEKCREILETITIAISPDD---EAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEK 155 (500)
T ss_dssp HHHHHHHHHHHHHHCEECCTTC---HHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCCc---HHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEE
Confidence 9999999999999999986422 57899999999999999999999999999999999754 34 67899999
Q ss_pred eCCCCCCCceeeeeEEEeccCC-CCCCccccCcceEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHH
Q 009718 199 KPGGSLKDSFLDEGFILDKKIG-IGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKI 277 (527)
Q Consensus 199 ~~g~~~~dS~l~~Givl~~~~~-~~~~~~~~n~~Ill~~~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I 277 (527)
++|+++++|++++|++|++++. +.||+.++||||++++++|++++++.+ +++.+++++++..+.+.|+++++.++++|
T Consensus 156 ~~G~~~~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~~Le~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~le~I 234 (500)
T 3aq1_B 156 RAGGSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSCPVEFRKTEVD-SEIKITSPGQMQLFLDQEEKMMREMAEKV 234 (500)
T ss_dssp EESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBCC--------------------------CHHHHHHHHH
T ss_pred ecCCCccceEEEeeeEEeecCCCCCCcccccCCEEEEEeCCccccccccc-eeEeeCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999975 468999999999999999999998874 78999999999999999999999999999
Q ss_pred HhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEE
Q 009718 278 IAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHF 357 (527)
Q Consensus 278 ~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~ 357 (527)
++.|++||+++++|++.+++||.++||++++++++++|+|||++|||+++++++++++.++|+|+.|++..+|+++|++|
T Consensus 235 ~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~ 314 (500)
T 3aq1_B 235 IASGANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTYV 314 (500)
T ss_dssp HTTCCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEEE
T ss_pred HHhCcCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCCceEEEEEEecCeEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhHHHHHHHHHH
Q 009718 358 SGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRA 437 (527)
Q Consensus 358 ~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~a 437 (527)
++|+++++|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++++.+|++++.+.++++|+++++||+|
T Consensus 315 ~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~A 394 (500)
T 3aq1_B 315 TGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEA 394 (500)
T ss_dssp EEETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH
T ss_pred ECCCCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998999999999999999
Q ss_pred HhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhHhHHhh
Q 009718 438 LVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIIT 517 (527)
Q Consensus 438 L~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~iD~iI~ 517 (527)
|+.||++||+|||+|+.+++.+|++.|.+++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|.
T Consensus 395 Le~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~ 474 (500)
T 3aq1_B 395 LEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVA 474 (500)
T ss_dssp TTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999987777899999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCC
Q 009718 518 CAPRRRED 525 (527)
Q Consensus 518 ~~~~~~~~ 525 (527)
..|+++++
T Consensus 475 ~~~~~~~~ 482 (500)
T 3aq1_B 475 SKGSANQG 482 (500)
T ss_dssp --------
T ss_pred cCccCCCC
Confidence 98876554
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=5.2e-95 Score=774.05 Aligned_cols=463 Identities=25% Similarity=0.375 Sum_probs=423.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccCh----HHHHHHHHHhhhhc
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDD 88 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~ 88 (527)
..+|.++|.+|+.||..|+++|+|||||+||+|||+++. |+++|||||+||+++|+++|| +|+|++++|++|++
T Consensus 5 ~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~--g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~ 82 (543)
T 1we3_A 5 LVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKF--GSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTND 82 (543)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSS--SSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCC--CCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhhe
Confidence 568899999999999999999999999999999999997 999999999999999999999 99999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccc
Q 009718 89 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILS 168 (527)
Q Consensus 89 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~ 168 (527)
++||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++. ++.|.++++++.+
T Consensus 83 e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-----~~~l~~vA~iS~~----- 152 (543)
T 1we3_A 83 VAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVED-----RKAIEEVATISAN----- 152 (543)
T ss_dssp HHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCS-----HHHHHHHHHHHHT-----
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC-----HHHHHHhhhhhcC-----
Confidence 999999999999999999999999999999999999999999999999999999863 4789999987652
Q ss_pred hhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCc-eeeeeEEEeccCCC--------CCCccccCcceEEeeecc
Q 009718 169 QDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDS-FLDEGFILDKKIGI--------GQPKRIENAKILVANTAM 239 (527)
Q Consensus 169 ~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS-~l~~Givl~~~~~~--------~~~~~~~n~~Ill~~~~L 239 (527)
++++++++++|+.++++++ .|+|. +|+++++| ++++|++|++++.+ .||..++||+|++++++
T Consensus 153 --~~~i~~li~dAv~~V~~~g---~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~- 224 (543)
T 1we3_A 153 --DPEVGKLIADAMEKVGKEG---IITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKK- 224 (543)
T ss_dssp --CHHHHHHHHHHHHTTCTTS---EEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSC-
T ss_pred --CHHHHHHHHHHHHHhCcCC---cEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCC-
Confidence 6889999999999997654 35554 89999999 99999999999743 26677999999999874
Q ss_pred ccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHc------CCeEEe-----
Q 009718 240 DTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIE----- 308 (527)
Q Consensus 240 e~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~------~I~~i~----- 308 (527)
+++++++. .+++++.+.++++|+++++|++.+++||..+ ++++++
T Consensus 225 -------------Is~~~~l~-----------~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~ 280 (543)
T 1we3_A 225 -------------VSNVRELL-----------PILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFG 280 (543)
T ss_dssp -------------BCCHHHHH-----------HHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSH
T ss_pred -------------cCCHHHHH-----------HHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchh
Confidence 34555542 4677889999999999999999999999885 567777
Q ss_pred cCChhhHHHHHHHhCCccccc-----cCCCCCCCCcccceEEEEEEcCeEEEEEecCCC---------------------
Q 009718 309 HADFDGIERLALVTGGEIAST-----FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEM--------------------- 362 (527)
Q Consensus 309 ~v~~~~L~~la~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~--------------------- 362 (527)
++++++|+|||++|||+++++ ++++++.++|+|+.|+ ++.+++++|+||.+
T Consensus 281 ~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~---~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~ 357 (543)
T 1we3_A 281 DRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVR---ITKDETTIVGGKGKKEDIEARINGIKKELETTDSE 357 (543)
T ss_dssp HHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEE---ECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSH
T ss_pred hhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEE---EEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCch
Confidence 788899999999999999996 8999999999999997 57899999999875
Q ss_pred --------------CceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhH
Q 009718 363 --------------GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKS 428 (527)
Q Consensus 363 --------------~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~ 428 (527)
+++|||+|||+|+.+++|+||+++||++++|++++++ +|||||++|++++.+|++++.+.++++|
T Consensus 358 ~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~g~~q 436 (543)
T 1we3_A 358 YAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLEGDEA 436 (543)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCCHHHH
T ss_pred hHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccCchHH
Confidence 3789999999999999999999999999999999876 9999999999999999999988899999
Q ss_pred HHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q 009718 429 HAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEM 508 (527)
Q Consensus 429 ~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~ 508 (527)
+++++|++||+.||++||+|||+|+.+++.+|++.| ++.++|||..+|++.||++.|||||+.||+++|+.|+|+|++
T Consensus 437 ~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h--~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~ 514 (543)
T 1we3_A 437 TGAKIVRRALEEPARQIAENAGYEGSVIVQQILAET--KNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGAL 514 (543)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCC--SCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhc--CCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999876 457899999999999999999999999999999999999999
Q ss_pred HHhHhHHhhcCCCCCCC
Q 009718 509 ILRVDEIITCAPRRRED 525 (527)
Q Consensus 509 iL~iD~iI~~~~~~~~~ 525 (527)
|||+|++|...|++.++
T Consensus 515 iL~id~iI~~~~~~~~~ 531 (543)
T 1we3_A 515 ILTTEAVVAEKPEKKES 531 (543)
T ss_dssp HHTEEEEEEECSCC---
T ss_pred HHHHHHHhhcCCccCCC
Confidence 99999999998875543
No 24
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=6e-94 Score=764.54 Aligned_cols=459 Identities=22% Similarity=0.340 Sum_probs=420.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccCh----HHHHHHHHHhhhhc
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDD 88 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~ 88 (527)
..+|.++|.+|+.||..|+++|+|||||+||+|||+++. |+++|||||+||+++|+++|| +|+|++++|++|++
T Consensus 5 ~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~--G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~ 82 (547)
T 1kp8_A 5 VKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSF--GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAND 82 (547)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSS--SSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCC--CCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhcc
Confidence 467899999999999999999999999999999999997 999999999999999999999 99999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccc
Q 009718 89 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILS 168 (527)
Q Consensus 89 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~ 168 (527)
++||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++. ++.|.+++++++
T Consensus 83 e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-----~e~l~~vA~iS~------ 151 (547)
T 1kp8_A 83 AAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSD-----SKAIAQVGTISA------ 151 (547)
T ss_dssp HHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCS-----HHHHHHHHHHHT------
T ss_pred ccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCC-----HHHHHHHHHHhc------
Confidence 999999999999999999999999999999999999999999999999999999863 478999998775
Q ss_pred hhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCc-eeeeeEEEeccCCC--------CCCccccCcceEEeeecc
Q 009718 169 QDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDS-FLDEGFILDKKIGI--------GQPKRIENAKILVANTAM 239 (527)
Q Consensus 169 ~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS-~l~~Givl~~~~~~--------~~~~~~~n~~Ill~~~~L 239 (527)
+++++|++++++|+.++++++ .|+|. +|+++++| ++++|++|+++|.+ .||+.++||+|+++|+++
T Consensus 152 ~~~~~i~~liadAv~~V~~dg---~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~I 226 (547)
T 1kp8_A 152 NSDETVGKLIAEAMDKVGKEG---VITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKI 226 (547)
T ss_dssp TSCHHHHHHHHHHHHHHCTTS---EEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEE
T ss_pred cchhHHHHHHHHHHHHhCcCC---cEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcC
Confidence 358999999999999998654 35554 89999999 99999999999743 266779999999999753
Q ss_pred ccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcC------CeEEe-----
Q 009718 240 DTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAG------ILAIE----- 308 (527)
Q Consensus 240 e~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~------I~~i~----- 308 (527)
++++++. .++++|.+.++++++++++|++.+++||..++ |++++
T Consensus 227 --------------s~~~~l~-----------~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~ 281 (547)
T 1kp8_A 227 --------------SNIREML-----------PVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFG 281 (547)
T ss_dssp --------------CCGGGTH-----------HHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCH
T ss_pred --------------CCHHHHH-----------HHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccc
Confidence 4444432 46778899999999999999999999999864 56776
Q ss_pred cCChhhHHHHHHHhCCccccc-----cCCCCCCCCcccceEEEEEEcCeEEEEEecCCCC--------------------
Q 009718 309 HADFDGIERLALVTGGEIAST-----FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG-------------------- 363 (527)
Q Consensus 309 ~v~~~~L~~la~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-------------------- 363 (527)
++++++|+|||++|||+++++ ++++++.++|+|+.|+ ++.+++++|+||.++
T Consensus 282 ~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~---~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~ 358 (547)
T 1kp8_A 282 DRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVV---INKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSD 358 (547)
T ss_dssp HHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEE---ECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSH
T ss_pred cccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEE---EccceEEEEcCCCCHHHHHHHHHHHHHHhhcccch
Confidence 888899999999999999996 8999999999999997 578999999999754
Q ss_pred ---------------ceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhH
Q 009718 364 ---------------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKS 428 (527)
Q Consensus 364 ---------------~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~ 428 (527)
++|||+|||+|+.+++|+||+++||++++|++++++ +|||||++|++++.+|++++. .++++|
T Consensus 359 ~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q 436 (547)
T 1kp8_A 359 YDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASKLADLRG-QNADQN 436 (547)
T ss_dssp HHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCCC-SSHHHH
T ss_pred hhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHhc-cCchHH
Confidence 689999999999999999999999999999999876 999999999999999998876 788999
Q ss_pred HHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q 009718 429 HAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEM 508 (527)
Q Consensus 429 ~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~ 508 (527)
+++++|++||+.||++|++|||+|+.+++.+|++. +.++|||..+|++.||++.|||||+.||+++|+.|+|+|++
T Consensus 437 ~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~----~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~ 512 (547)
T 1kp8_A 437 VGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG----DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGL 512 (547)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS----CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc----CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999853 46799999999999999999999999999999999999999
Q ss_pred HHhHhHHhhcCCCCC
Q 009718 509 ILRVDEIITCAPRRR 523 (527)
Q Consensus 509 iL~iD~iI~~~~~~~ 523 (527)
||++|++|...|++.
T Consensus 513 iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 513 MITTECMVTDLPKND 527 (547)
T ss_dssp HHTEEEEEEECCC--
T ss_pred HHhHhheeecCCccC
Confidence 999999999988654
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=6.7e-95 Score=772.59 Aligned_cols=460 Identities=23% Similarity=0.347 Sum_probs=393.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccCh----HHHHHHHHHhhhhc
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDD 88 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~ 88 (527)
..+|.++|.+|+.||..|+++|+|||||+||+|||+++. |+++|||||+||+|+|+++|| +|+|++++|++|++
T Consensus 6 ~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~--g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~ 83 (545)
T 1iok_A 6 VKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSF--GAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTND 83 (545)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSS--SSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGG
T ss_pred hhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCC--CCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhcc
Confidence 568899999999999999999999999999999999997 999999999999999999999 99999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccc
Q 009718 89 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILS 168 (527)
Q Consensus 89 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~ 168 (527)
++||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++.. +.|.+++++++
T Consensus 84 e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~-----e~l~~va~iS~------ 152 (545)
T 1iok_A 84 EAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDS-----SEVAQVGTISA------ 152 (545)
T ss_dssp GCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCST-----TTTTHHHHHTT------
T ss_pred ccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCH-----HHHHHHHHhhc------
Confidence 9999999999999999999999999999999999999999999999999999998643 57889998765
Q ss_pred hhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCc-eeeeeEEEeccCCC--------CCCccccCcceEEeeecc
Q 009718 169 QDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDS-FLDEGFILDKKIGI--------GQPKRIENAKILVANTAM 239 (527)
Q Consensus 169 ~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS-~l~~Givl~~~~~~--------~~~~~~~n~~Ill~~~~L 239 (527)
+++++|++++++|+.++++++. |+|. +|+++++| ++++|++|++++.+ .||..++||+|+++++++
T Consensus 153 ~~~~~i~~li~dAv~~V~~~g~---I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I 227 (545)
T 1iok_A 153 NGESFIGQQIAEAMQRVGNEGV---ITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKL 227 (545)
T ss_dssp TTCHHHHHHHHHHHHHHCTTSC---CCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCB
T ss_pred CCchhHHHHHHHHHHHhccCCe---EEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCc
Confidence 4688999999999999986643 5564 79999999 99999999999743 267779999999999875
Q ss_pred ccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcC------CeEEe-----
Q 009718 240 DTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAG------ILAIE----- 308 (527)
Q Consensus 240 e~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~------I~~i~----- 308 (527)
+. ++++ ..++++|.+.++++++++++|++.+++||..++ |++++
T Consensus 228 ~~--------------~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~ 282 (545)
T 1iok_A 228 SS--------------LQPM-----------VPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFG 282 (545)
T ss_dssp CC--------------CCC----------------------CCCCEEEESCBC-----------------CEEEECSCCT
T ss_pred CC--------------HHHH-----------HHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhh
Confidence 42 2232 245777889999999999999999999999864 56766
Q ss_pred cCChhhHHHHHHHhCCccccc-----cCCCCCCCCcccceEEEEEEcCeEEEEEecCCCC--------------------
Q 009718 309 HADFDGIERLALVTGGEIAST-----FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG-------------------- 363 (527)
Q Consensus 309 ~v~~~~L~~la~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-------------------- 363 (527)
++++++|+|||++|||+++++ ++++++.++|+|+.|+ ++.++|++|+||+++
T Consensus 283 ~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~---~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~ 359 (545)
T 1iok_A 283 DRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVS---INKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSD 359 (545)
T ss_dssp THHHHHHHHHHHHHTC---------------CTTSEEEEEEE---ECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCS
T ss_pred hccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEE---EecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCch
Confidence 889999999999999999996 9999999999999998 567999999998753
Q ss_pred ---------------ceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhH
Q 009718 364 ---------------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKS 428 (527)
Q Consensus 364 ---------------~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~ 428 (527)
++|||+|||+|+.+++|.||+++||++++|++++++ +|||||++|++++.+|++++. .++++|
T Consensus 360 ~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q 437 (545)
T 1iok_A 360 YDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSG-ANSDQD 437 (545)
T ss_dssp SHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCC-SSHHHH
T ss_pred hhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhc-cCchHH
Confidence 789999999999999999999999999999999876 999999999999999998876 788999
Q ss_pred HHHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q 009718 429 HAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEM 508 (527)
Q Consensus 429 ~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~ 508 (527)
+++++|++||+.||++|++|||+|+.+++.+|++.| ++++|||..+|++.||++.|||||+.||+++|+.|+|+|++
T Consensus 438 ~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~---~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~ 514 (545)
T 1iok_A 438 AGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESS---DKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGL 514 (545)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC---STTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc---CCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998654 46799999999999999999999999999999999999999
Q ss_pred HHhHhHHhhcCCCCC
Q 009718 509 ILRVDEIITCAPRRR 523 (527)
Q Consensus 509 iL~iD~iI~~~~~~~ 523 (527)
||++|++|...|++.
T Consensus 515 iL~id~iI~~~~~~~ 529 (545)
T 1iok_A 515 LITTEAMIAEKPEPK 529 (545)
T ss_dssp HHTEEEEEEECC---
T ss_pred HHhHHHhhccCCccC
Confidence 999999999988654
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.1e-93 Score=760.44 Aligned_cols=460 Identities=25% Similarity=0.355 Sum_probs=345.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCccccccccccCCCCceEEccChHHHhhhccccChH----HHHHHHHHhhhhc
Q 009718 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPA----AKVLVDISKVQDD 88 (527)
Q Consensus 13 ~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~~~g~~~iTnDg~tIl~~l~~~hP~----a~ll~~~~~~~~~ 88 (527)
..+|+++|.+|+.|+..|+++|+|||||+||+|||+++. |+++|||||+||+++|+++||+ |+|++++|++|++
T Consensus 5 ~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~--G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~ 82 (546)
T 3rtk_A 5 IAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKW--GAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDD 82 (546)
T ss_dssp ----------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC-
T ss_pred eeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCC--CCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhh
Confidence 568999999999999999999999999999999999996 9999999999999999999998 9999999999999
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHhhcccccc
Q 009718 89 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILS 168 (527)
Q Consensus 89 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~i~~t~l~sK~~~ 168 (527)
++||||||+++||++||+++.+++.+|+||+.|++||+.|++.+++.|+++++|++. ++.|.++++++.+
T Consensus 83 e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~-----~e~L~~vA~iS~~----- 152 (546)
T 3rtk_A 83 VAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVET-----KEQIAATAAISAG----- 152 (546)
T ss_dssp ------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCS-----HHHHHHHHHHHHT-----
T ss_pred hhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC-----hHHHHhHeEEeCC-----
Confidence 999999999999999999999999999999999999999999999999999999873 4789999987753
Q ss_pred hhhhHHHHHHHHHHHhhccCCCcccceeEEeCCCCCCCceeeeeEEEeccCCC--------CCCccccCcceEEeeeccc
Q 009718 169 QDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI--------GQPKRIENAKILVANTAMD 240 (527)
Q Consensus 169 ~~~~~l~~li~~a~~~~~~~~~~~~I~i~~~~g~~~~dS~l~~Givl~~~~~~--------~~~~~~~n~~Ill~~~~Le 240 (527)
++++++++++|+.+++.++ .|+|.+. ++...+|++++|++|++++.+ .||+.++||+|+++++.
T Consensus 153 --~~~i~~liadAv~~V~~dg---vI~Ve~~-~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~k-- 224 (546)
T 3rtk_A 153 --DQSIGDLIAEAMDKVGNEG---VITVEES-NTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSK-- 224 (546)
T ss_dssp --CHHHHHHHHHHHHHSCTTS---EEEEECC-SSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSE--
T ss_pred --chHHHHHHHHHHHHhccCC---ceEEEec-CCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCc--
Confidence 6789999999999998764 3666543 345578999999999999743 47889999999999864
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCccCCchHHHHHHHcC------CeEEe-----c
Q 009718 241 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAG------ILAIE-----H 309 (527)
Q Consensus 241 ~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~------I~~i~-----~ 309 (527)
|++++++. .++++|.+.|+++++++++|++.+++||..++ +++++ +
T Consensus 225 ------------Is~~~~l~-----------~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~ 281 (546)
T 3rtk_A 225 ------------VSTVKDLL-----------PLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGD 281 (546)
T ss_dssp ------------ECCSTTTH-----------HHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHH
T ss_pred ------------cCCHHHHH-----------HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccc
Confidence 34555542 35788999999999999999999999998764 45654 3
Q ss_pred CChhhHHHHHHHhCCcccc-----ccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCC---------------------
Q 009718 310 ADFDGIERLALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG--------------------- 363 (527)
Q Consensus 310 v~~~~L~~la~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~--------------------- 363 (527)
.++++|+|||++|||++++ +++++++.++|+|+.|+ ++.+++++|++|.++
T Consensus 282 ~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~ 358 (546)
T 3rtk_A 282 RRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVV---VTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDY 358 (546)
T ss_dssp HHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEE---ECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHH
T ss_pred cchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEE---EcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchh
Confidence 3477899999999999999 58999999999999997 799999999998763
Q ss_pred --------------ceeEEeecCCcHhHHHHHHHHHHHHHHHHHHHhhCCccccCCChHHHHHHHHHHHHHhcCCChhHH
Q 009718 364 --------------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSH 429 (527)
Q Consensus 364 --------------~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~ 429 (527)
++|||+|||+|+.+++|+||+++||++++|++++++ +|||||++|++++.+|++++ .++++|+
T Consensus 359 ~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~--~~g~eq~ 435 (546)
T 3rtk_A 359 DREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK--LEGDEAT 435 (546)
T ss_dssp HHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC--CCTTHHH
T ss_pred hHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc--cccHHHH
Confidence 389999999999999999999999999999999875 99999999999999999887 7899999
Q ss_pred HHHHHHHHHhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcceEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHH
Q 009718 430 AIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMI 509 (527)
Q Consensus 430 ~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~i 509 (527)
++++|++||+.||++||+|||+|+.+++.+|++. ...+|||+.+|++.||++.|||||+.||+++|+.|+|+|++|
T Consensus 436 ~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~----~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~i 511 (546)
T 3rtk_A 436 GANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL----PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLF 511 (546)
T ss_dssp HHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS----CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh----cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999873 234899999999999999999999999999999999999999
Q ss_pred HhHhHHhhcCCCCCCC
Q 009718 510 LRVDEIITCAPRRRED 525 (527)
Q Consensus 510 L~iD~iI~~~~~~~~~ 525 (527)
||+|++|...|+++++
T Consensus 512 L~id~iI~~~~~~~~~ 527 (546)
T 3rtk_A 512 LTTEAVVADKPEKEKA 527 (546)
T ss_dssp HHCC------------
T ss_pred HHHHHHHhcCCCCCCC
Confidence 9999999998876654
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=1.2e-36 Score=278.84 Aligned_cols=172 Identities=22% Similarity=0.356 Sum_probs=148.9
Q ss_pred CCCceeeeeEEEeccCCC-CCCccccCcceEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 009718 204 LKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGI 282 (527)
Q Consensus 204 ~~dS~l~~Givl~~~~~~-~~~~~~~n~~Ill~~~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v 282 (527)
++||++++|++|++++.+ .||+.++||||++++|+|++++++. ++++.++++++++.+.+.|++++++++++|++.|+
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~-~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 79 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGES-QTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKP 79 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC---------------CHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccC-ccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 468999999999999765 5999999999999999999999887 47899999999999999999999999999999999
Q ss_pred eEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCccccccCCCCCCCCcc-cceEEEEEEcCeEEEEEecCC
Q 009718 283 NCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGH-CKLIEEIMIGEDKLIHFSGVE 361 (527)
Q Consensus 283 ~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~i~~~~~~~~~~~~ 361 (527)
|||+++++|+|.+++||.++||++++|+++++|+|||++|||+++++++++++.++|+ |+.|++..+|+++|++|+||+
T Consensus 80 nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~ 159 (178)
T 1gml_A 80 DVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCK 159 (178)
T ss_dssp SEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEES
T ss_pred cEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEECCC
Confidence 9999999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CCceeEEeecCCcHh
Q 009718 362 MGQACTIVLRGASHH 376 (527)
Q Consensus 362 ~~~~~TIll~G~t~~ 376 (527)
++++|||+|||++..
T Consensus 160 ~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 160 DPKACTILLRGASHH 174 (178)
T ss_dssp STTSCEEEEEC----
T ss_pred CCCEEEEEEECCCcc
Confidence 999999999999864
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.97 E-value=2.2e-31 Score=238.87 Aligned_cols=153 Identities=27% Similarity=0.433 Sum_probs=145.2
Q ss_pred eeeEEEeccCCC-CCCccccCcceEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeC
Q 009718 210 DEGFILDKKIGI-GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNR 288 (527)
Q Consensus 210 ~~Givl~~~~~~-~~~~~~~n~~Ill~~~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lvl~~ 288 (527)
++|++|++++.+ +||+.++||||++++|+|++++++.. +++.+++++++..+.+.|++++++++++|++.|+|||+++
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~-~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~ 79 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIE-AKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQ 79 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHH-HHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEES
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccc-eeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEEC
Confidence 579999999765 59999999999999999999998874 7788999999999999999999999999999999999999
Q ss_pred ccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCccccccCCCCCCCCcccceEEEEEEcCeEEEEEecCCCC
Q 009718 289 QLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG 363 (527)
Q Consensus 289 ~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ii~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~ 363 (527)
++|+|.+++||.++||++++|+++++|+|||++|||++++++++++++.+|+|+.|++..+|+++|++|+||++.
T Consensus 80 k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 80 KGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp SCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEESCC--
T ss_pred CccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCccceEEEEEEECCeEEEEEECCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999864
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=98.32 E-value=5.9e-06 Score=74.01 Aligned_cols=143 Identities=17% Similarity=0.240 Sum_probs=95.2
Q ss_pred eeeeeEEEeccCC-C-------CCCccccCcceEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHh
Q 009718 208 FLDEGFILDKKIG-I-------GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIA 279 (527)
Q Consensus 208 ~l~~Givl~~~~~-~-------~~~~~~~n~~Ill~~~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~ 279 (527)
++++|+-|+++|. + .|...++||.|++++- .|++.+++.++.+ ...+
T Consensus 3 evvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdk--------------KIs~i~~ilP~LE-----------~~~~ 57 (194)
T 3m6c_A 3 EFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQD--------------KISSLPDLLPLLE-----------KVAG 57 (194)
T ss_dssp CCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSS--------------EECCHHHHHHHHH-----------HHHH
T ss_pred EEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcC--------------ccCCHHHHHHHHH-----------HHHH
Confidence 5788999999863 1 2445688899998861 3788888877543 2222
Q ss_pred cCCeEEEeCccCCchHHHHHHH------cCCeEEecCC-----hhhHHHHHHHhCCcccc-----ccCCCCCCCCcccce
Q 009718 280 HGINCFVNRQLIYNFPEELFAD------AGILAIEHAD-----FDGIERLALVTGGEIAS-----TFDNPESVKLGHCKL 343 (527)
Q Consensus 280 ~~v~lvl~~~~I~~~~~~~l~~------~~I~~i~~v~-----~~~L~~la~~tGa~ii~-----~~~~l~~~~lG~~~~ 343 (527)
.+-.+++....|+..++..|.- .++++++... +..|++||.+||+++++ ++++.+..++|+|++
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~ 137 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARR 137 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccE
Confidence 2324666666777766655532 3466777655 45699999999999998 367788889999988
Q ss_pred EEEEEEcCeEEEEEecCCCCceeEEeec-CCcHhHHHHHHHHHHHHHHH
Q 009718 344 IEEIMIGEDKLIHFSGVEMGQACTIVLR-GASHHVLDEAERSLHDALCV 391 (527)
Q Consensus 344 v~~~~i~~~~~~~~~~~~~~~~~TIll~-G~t~~~l~e~~~~i~dal~~ 391 (527)
+. +.. --|.+++ ++++..++++-..++..+..
T Consensus 138 v~---vtk-------------d~T~iv~G~g~~~~I~~Rv~qIr~~ie~ 170 (194)
T 3m6c_A 138 VV---VSK-------------DDTVIVDGGGTAEAVANRAKHLRAEIDK 170 (194)
T ss_dssp EE---ECS-------------SCEEEEEECCCHHHHHHHHHHHHHHHHT
T ss_pred EE---EcC-------------CceEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 86 322 2245554 45666666666666655543
No 30
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=98.25 E-value=1.9e-05 Score=70.97 Aligned_cols=141 Identities=11% Similarity=0.171 Sum_probs=94.1
Q ss_pred eeeEEEeccCC-C-------CCCccccCcceEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 009718 210 DEGFILDKKIG-I-------GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHG 281 (527)
Q Consensus 210 ~~Givl~~~~~-~-------~~~~~~~n~~Ill~~~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~ 281 (527)
.+|+-|+++|. + .|...++||.|++.+ -.|++.+++.++.+ .+.+.+
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitd--------------kKIs~i~~ilP~LE-----------~v~~~~ 66 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVD--------------KKISNIRELLPVLE-----------GVAKAS 66 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEE--------------EEECCHHHHHHHHH-----------HHHTSS
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEc--------------CccCCHHHHHHHHH-----------HHHHhC
Confidence 35888888863 1 244568899999986 24788888877443 333344
Q ss_pred CeEEEeCccCCchHHHHHHH------cCCeEEecCC-----hhhHHHHHHHhCCccccc-----cCCCCCCCCcccceEE
Q 009718 282 INCFVNRQLIYNFPEELFAD------AGILAIEHAD-----FDGIERLALVTGGEIAST-----FDNPESVKLGHCKLIE 345 (527)
Q Consensus 282 v~lvl~~~~I~~~~~~~l~~------~~I~~i~~v~-----~~~L~~la~~tGa~ii~~-----~~~l~~~~lG~~~~v~ 345 (527)
-.+++....|+..++..|.- .++++++... +..|++||.+||+++++. +++.+..++|+|++|.
T Consensus 67 rpLlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~ 146 (201)
T 3osx_A 67 KPLVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVV 146 (201)
T ss_dssp CCEEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEE
T ss_pred CCeEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEE
Confidence 34666666777766655532 3466777665 456999999999999984 5777888999998886
Q ss_pred EEEEcCeEEEEEecCCCCceeEEeec-CCcHhHHHHHHHHHHHHHHH
Q 009718 346 EIMIGEDKLIHFSGVEMGQACTIVLR-GASHHVLDEAERSLHDALCV 391 (527)
Q Consensus 346 ~~~i~~~~~~~~~~~~~~~~~TIll~-G~t~~~l~e~~~~i~dal~~ 391 (527)
+.. --|.++. +++...++++-..++..+..
T Consensus 147 ---vtk-------------d~TtIv~G~G~~~~I~~Rv~qIr~qie~ 177 (201)
T 3osx_A 147 ---INK-------------DTTTIIDGVGEEGAIAARVTQIRQQIEE 177 (201)
T ss_dssp ---ECS-------------SCEEEEEECCCHHHHHHHHHHHHHHHHT
T ss_pred ---EcC-------------CceEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 322 2255554 45666667766666655543
No 31
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=98.09 E-value=1.5e-05 Score=68.09 Aligned_cols=118 Identities=19% Similarity=0.254 Sum_probs=79.8
Q ss_pred eEEEeccCC-C-------CCCccccCcceEEeeeccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCe
Q 009718 212 GFILDKKIG-I-------GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGIN 283 (527)
Q Consensus 212 Givl~~~~~-~-------~~~~~~~n~~Ill~~~~Le~~~~~~~~~~i~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~ 283 (527)
|+-|+++|. + .|...++||.|++.+- +|++.+++.++.+ ++.+.+-.
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdk--------------KIs~i~~llP~LE-----------~v~~~~~p 55 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEK--------------KVSNVRELLPILE-----------QVAQTGKP 55 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESS--------------EECCHHHHHHHHH-----------HHHTTTCC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecc--------------cccCHHHHHHHHH-----------HHHHHCCC
Confidence 667777752 1 2445678999999861 3788888877443 33334434
Q ss_pred EEEeCccCCchHHHHHHH------cCCeEEecCC-----hhhHHHHHHHhCCccccc-----cCCCCCCCCcccceEEEE
Q 009718 284 CFVNRQLIYNFPEELFAD------AGILAIEHAD-----FDGIERLALVTGGEIAST-----FDNPESVKLGHCKLIEEI 347 (527)
Q Consensus 284 lvl~~~~I~~~~~~~l~~------~~I~~i~~v~-----~~~L~~la~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~ 347 (527)
+++....|+..++..|.- .++++++... +..|++||.+||+++++. +++.+..++|+|+++.
T Consensus 56 LlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~-- 133 (145)
T 1srv_A 56 LLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVR-- 133 (145)
T ss_dssp EEEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEE--
T ss_pred EEEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEE--
Confidence 666667787777666533 3456666553 467999999999999984 5677778899999887
Q ss_pred EEcCeEEEEE
Q 009718 348 MIGEDKLIHF 357 (527)
Q Consensus 348 ~i~~~~~~~~ 357 (527)
+..++.+.+
T Consensus 134 -vtkd~TtIv 142 (145)
T 1srv_A 134 -ITKDETTIV 142 (145)
T ss_dssp -ECSSCEEEE
T ss_pred -EcCCCeEEe
Confidence 554444333
No 32
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=44.79 E-value=47 Score=26.77 Aligned_cols=53 Identities=19% Similarity=0.136 Sum_probs=39.3
Q ss_pred HHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCc
Q 009718 272 EKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGE 325 (527)
Q Consensus 272 ~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ 325 (527)
..++.|.+.+|++|++. +|.+-+...|.+.||-++.....+--+.|.....+.
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 45667778899999997 689999999999999999865544334445444443
No 33
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=44.77 E-value=47 Score=27.67 Aligned_cols=53 Identities=17% Similarity=0.081 Sum_probs=39.5
Q ss_pred HHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCc
Q 009718 272 EKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGE 325 (527)
Q Consensus 272 ~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ 325 (527)
..++.|.+.+|++|++. +|.+-+...|.++||-++.....+--+.|.....++
T Consensus 67 ~~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp CHHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 35667778899999997 689999999999999999876544334455444443
No 34
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=42.40 E-value=58 Score=26.19 Aligned_cols=51 Identities=12% Similarity=0.068 Sum_probs=37.8
Q ss_pred HHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCCh-hhHHHHHHHhCC
Q 009718 273 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADF-DGIERLALVTGG 324 (527)
Q Consensus 273 ~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~-~~L~~la~~tGa 324 (527)
..+.|.+.+|++|++. +|.+-+...|.+.||-++..... .--+.|.....+
T Consensus 59 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g 110 (120)
T 2wfb_A 59 AAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDG 110 (120)
T ss_dssp HHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTT
T ss_pred HHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcC
Confidence 4566777899999997 58999999999999999987554 333444444433
No 35
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=39.05 E-value=66 Score=25.99 Aligned_cols=52 Identities=21% Similarity=0.203 Sum_probs=38.8
Q ss_pred HHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCc
Q 009718 273 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGE 325 (527)
Q Consensus 273 ~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ 325 (527)
.++.|...+|++|++. +|.+-+...|.++||-++.....+--+.|.....+.
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 4566778899999997 589999999999999999865544334455544443
No 36
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=35.63 E-value=64 Score=25.68 Aligned_cols=52 Identities=15% Similarity=0.204 Sum_probs=38.5
Q ss_pred HHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCc
Q 009718 273 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGE 325 (527)
Q Consensus 273 ~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ 325 (527)
..+.|...+|++|++. ++.+-+...|.++||.++.....+--+.|.....+.
T Consensus 54 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 4566678899999997 588999999999999999865544344455555443
No 37
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=30.11 E-value=95 Score=25.72 Aligned_cols=51 Identities=16% Similarity=0.178 Sum_probs=36.6
Q ss_pred HHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCc
Q 009718 273 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGE 325 (527)
Q Consensus 273 ~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ 325 (527)
..+.|.+.+|++|++. +|.+-+...|.+ ||-++.....+--+.|.....+.
T Consensus 71 ~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 71 MLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 4566777899999996 588999999999 99999875533333444444433
No 38
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=26.48 E-value=1.2e+02 Score=20.63 Aligned_cols=35 Identities=20% Similarity=0.192 Sum_probs=24.8
Q ss_pred HHHHHHHHcCCChHHHHHHHHHH---HHHHHHHHhhcc
Q 009718 106 REAEKLVAAKIHPMTIISGFRMA---AECARDALLQKV 140 (527)
Q Consensus 106 ~~~~~li~~gi~p~~I~~g~~~a---~~~~~~~L~~~s 140 (527)
.+...|+..|+++...+++++.+ .+.+-..|.+..
T Consensus 13 ~~Ia~Lm~mGFsr~~ai~AL~~a~nnve~AaniLlef~ 50 (52)
T 2ooa_A 13 AKIAKLMGEGYAFEEVKRALEIAQNNVEVARSILREFA 50 (52)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHTTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCCCHHHHHHHHHHhc
Confidence 35678899999999999988876 344444554443
No 39
>2ln3_A De novo designed protein OR135; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=24.30 E-value=1.9e+02 Score=20.38 Aligned_cols=45 Identities=29% Similarity=0.271 Sum_probs=32.1
Q ss_pred HHHHHHHhcCCeEEEeCccCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCcccc
Q 009718 272 EKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIAS 328 (527)
Q Consensus 272 ~~~~~I~~~~v~lvl~~~~I~~~~~~~l~~~~I~~i~~v~~~~L~~la~~tGa~ii~ 328 (527)
.+..+.+..|.++-+--.+.+|--..-|. .+|+++|+-||..|..
T Consensus 17 eialkfisqgldlevefdstddkeieefe------------rdmedlakktgvqiqk 61 (83)
T 2ln3_A 17 EIALKFISQGLDLEVEFDSTDDKEIEEFE------------RDMEDLAKKTGVQIQK 61 (83)
T ss_dssp HHHHHHHHHTCEEEEEECCCCHHHHHHHH------------HHHHHHHHHHTCCEEE
T ss_pred HHHHHHHhcCCceEEEecCCChHHHHHHH------------hHHHHHHHhhchhHHH
Confidence 44556667788887766677775555553 5699999999987654
Done!