Query 009719
Match_columns 527
No_of_seqs 415 out of 1616
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 11:29:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009719.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009719hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 99.1 4.8E-11 1.6E-15 117.6 4.4 87 143-235 50-136 (257)
2 3h2b_A SAM-dependent methyltra 99.0 7.9E-10 2.7E-14 101.7 8.1 119 143-264 52-180 (203)
3 1vl5_A Unknown conserved prote 99.0 3.4E-10 1.2E-14 108.5 5.6 88 144-235 49-141 (260)
4 2p7i_A Hypothetical protein; p 99.0 1.6E-09 5.4E-14 101.2 9.3 89 143-236 53-143 (250)
5 3l8d_A Methyltransferase; stru 98.9 2E-09 6.7E-14 101.3 9.0 129 143-278 64-209 (242)
6 2ld4_A Anamorsin; methyltransf 98.9 5.5E-10 1.9E-14 101.2 4.9 72 163-235 26-102 (176)
7 2gs9_A Hypothetical protein TT 98.9 2.3E-09 8E-14 99.1 6.8 75 161-236 60-134 (211)
8 2yqz_A Hypothetical protein TT 98.9 2.6E-09 9E-14 101.4 7.1 87 143-233 50-140 (263)
9 2o57_A Putative sarcosine dime 98.8 1.4E-09 4.9E-14 106.2 4.8 88 144-235 94-188 (297)
10 3ujc_A Phosphoethanolamine N-m 98.8 1.6E-09 5.4E-14 102.9 4.8 89 143-235 66-160 (266)
11 1xxl_A YCGJ protein; structura 98.8 2.3E-09 7.7E-14 102.1 5.7 88 144-235 33-125 (239)
12 3g5l_A Putative S-adenosylmeth 98.8 2.5E-09 8.4E-14 101.9 5.9 90 143-235 55-146 (253)
13 1pjz_A Thiopurine S-methyltran 98.8 1.1E-09 3.7E-14 102.7 3.4 86 144-232 34-138 (203)
14 3dlc_A Putative S-adenosyl-L-m 98.8 2.2E-09 7.5E-14 98.5 5.1 89 144-235 55-149 (219)
15 3dh0_A SAM dependent methyltra 98.8 1E-08 3.6E-13 95.1 9.4 100 163-263 68-178 (219)
16 3dli_A Methyltransferase; PSI- 98.8 1.9E-09 6.5E-14 102.3 3.9 88 143-236 52-142 (240)
17 1nkv_A Hypothetical protein YJ 98.8 3.8E-09 1.3E-13 100.3 5.9 71 163-235 65-141 (256)
18 3hnr_A Probable methyltransfer 98.8 1.4E-08 4.8E-13 94.3 9.2 89 143-235 56-146 (220)
19 2avn_A Ubiquinone/menaquinone 98.8 4.3E-09 1.5E-13 101.4 5.8 90 143-236 65-154 (260)
20 3bus_A REBM, methyltransferase 98.8 4.5E-09 1.5E-13 101.0 5.9 75 160-235 87-167 (273)
21 3ccf_A Cyclopropane-fatty-acyl 98.8 4.4E-09 1.5E-13 102.1 5.5 87 144-235 69-155 (279)
22 2p35_A Trans-aconitate 2-methy 98.8 4.2E-09 1.4E-13 100.0 5.2 70 164-235 64-133 (259)
23 3bkw_A MLL3908 protein, S-aden 98.8 6.2E-09 2.1E-13 97.7 6.0 90 143-235 54-145 (243)
24 2aot_A HMT, histamine N-methyl 98.7 3.4E-09 1.2E-13 104.2 3.4 74 161-235 86-173 (292)
25 3ege_A Putative methyltransfer 98.7 4.9E-09 1.7E-13 101.3 4.4 87 143-235 45-131 (261)
26 3sm3_A SAM-dependent methyltra 98.7 1.8E-08 6.3E-13 93.5 8.0 94 143-239 41-146 (235)
27 3f4k_A Putative methyltransfer 98.7 6.2E-09 2.1E-13 98.9 4.7 88 144-235 58-151 (257)
28 4htf_A S-adenosylmethionine-de 98.7 6.3E-09 2.2E-13 101.2 4.4 89 143-235 79-174 (285)
29 1xtp_A LMAJ004091AAA; SGPP, st 98.7 3.1E-09 1E-13 100.7 2.0 90 144-235 105-198 (254)
30 3thr_A Glycine N-methyltransfe 98.7 5.3E-09 1.8E-13 101.7 3.5 89 143-235 68-176 (293)
31 3i9f_A Putative type 11 methyl 98.7 1.4E-08 4.7E-13 90.8 5.9 86 143-235 28-113 (170)
32 3ou2_A SAM-dependent methyltra 98.7 7.5E-09 2.6E-13 95.3 4.3 89 143-235 57-147 (218)
33 2gb4_A Thiopurine S-methyltran 98.7 1.6E-08 5.4E-13 99.1 6.7 87 144-233 80-190 (252)
34 3ofk_A Nodulation protein S; N 98.7 1.7E-08 5.9E-13 93.6 6.5 89 143-235 62-155 (216)
35 3kkz_A Uncharacterized protein 98.7 1.8E-08 6.1E-13 97.1 6.8 89 143-235 57-151 (267)
36 3e23_A Uncharacterized protein 98.7 8.3E-09 2.8E-13 95.6 4.3 115 143-262 54-178 (211)
37 3cgg_A SAM-dependent methyltra 98.7 5.3E-08 1.8E-12 87.4 9.4 113 144-263 58-172 (195)
38 2p8j_A S-adenosylmethionine-de 98.7 1.5E-08 5.3E-13 93.0 5.9 74 162-235 51-129 (209)
39 2ex4_A Adrenal gland protein A 98.7 8.4E-09 2.9E-13 97.9 3.8 91 143-235 90-186 (241)
40 3mgg_A Methyltransferase; NYSG 98.7 1.5E-08 5.2E-13 97.7 5.3 88 144-235 49-143 (276)
41 3vc1_A Geranyl diphosphate 2-C 98.7 1.5E-08 5.2E-13 100.5 5.4 88 143-235 128-222 (312)
42 4gek_A TRNA (CMO5U34)-methyltr 98.7 1.9E-08 6.5E-13 99.0 6.0 72 162-235 101-179 (261)
43 3cc8_A Putative methyltransfer 98.7 2.1E-08 7.2E-13 92.6 5.8 88 143-236 43-132 (230)
44 3dtn_A Putative methyltransfer 98.7 1.8E-08 6.2E-13 94.6 5.4 89 143-235 55-149 (234)
45 3pfg_A N-methyltransferase; N, 98.6 2.7E-08 9.2E-13 95.4 6.7 88 143-234 61-151 (263)
46 4e2x_A TCAB9; kijanose, tetron 98.6 2.7E-09 9.2E-14 110.0 -0.3 90 143-236 118-210 (416)
47 4fsd_A Arsenic methyltransfera 98.6 3E-08 1E-12 102.0 7.3 72 163-235 114-204 (383)
48 3lcc_A Putative methyl chlorid 98.6 8.8E-08 3E-12 90.3 9.6 116 143-262 77-203 (235)
49 2kw5_A SLR1183 protein; struct 98.6 4E-08 1.4E-12 90.2 6.7 88 143-235 40-132 (202)
50 3g5t_A Trans-aconitate 3-methy 98.6 2.6E-08 8.9E-13 97.8 5.8 85 144-233 48-148 (299)
51 1vlm_A SAM-dependent methyltra 98.6 2.6E-08 8.8E-13 93.4 5.4 70 164-236 72-141 (219)
52 3gu3_A Methyltransferase; alph 98.6 3.8E-08 1.3E-12 96.3 6.8 89 143-236 33-128 (284)
53 1y8c_A S-adenosylmethionine-de 98.6 3.8E-08 1.3E-12 92.0 6.2 89 143-235 48-143 (246)
54 3ocj_A Putative exported prote 98.6 1.1E-07 3.9E-12 93.8 9.5 74 161-235 147-228 (305)
55 3jwg_A HEN1, methyltransferase 98.6 5.9E-08 2E-12 90.3 6.6 90 143-233 40-140 (219)
56 2xvm_A Tellurite resistance pr 98.6 5.6E-08 1.9E-12 88.2 6.0 88 143-234 43-136 (199)
57 3e8s_A Putative SAM dependent 98.6 4.7E-08 1.6E-12 90.1 5.6 87 143-235 63-153 (227)
58 3jwh_A HEN1; methyltransferase 98.5 8.3E-08 2.8E-12 89.4 6.3 91 143-234 40-141 (217)
59 2pxx_A Uncharacterized protein 98.5 3.9E-08 1.3E-12 90.1 3.3 90 144-235 54-160 (215)
60 1zx0_A Guanidinoacetate N-meth 98.5 3.9E-08 1.3E-12 93.4 2.9 89 143-234 71-170 (236)
61 1ve3_A Hypothetical protein PH 98.5 5.1E-08 1.7E-12 90.5 3.4 89 144-235 50-143 (227)
62 2a14_A Indolethylamine N-methy 98.5 5.8E-08 2E-12 94.3 3.6 54 182-235 138-198 (263)
63 3bxo_A N,N-dimethyltransferase 98.5 1.1E-07 3.7E-12 88.9 5.3 88 144-235 52-142 (239)
64 2vdw_A Vaccinia virus capping 98.5 7.5E-08 2.6E-12 96.7 4.2 91 143-235 55-170 (302)
65 3orh_A Guanidinoacetate N-meth 98.5 4E-08 1.4E-12 94.5 2.0 88 144-234 72-170 (236)
66 3g2m_A PCZA361.24; SAM-depende 98.5 8.9E-08 3E-12 94.0 4.5 89 143-235 93-191 (299)
67 1ri5_A MRNA capping enzyme; me 98.4 7.8E-08 2.7E-12 92.9 3.5 89 145-235 77-175 (298)
68 1kpg_A CFA synthase;, cyclopro 98.4 2E-07 6.8E-12 90.5 6.4 86 144-235 76-169 (287)
69 2g72_A Phenylethanolamine N-me 98.4 8.2E-08 2.8E-12 93.8 3.6 53 182-234 154-215 (289)
70 3hem_A Cyclopropane-fatty-acyl 98.4 3E-07 1E-11 90.3 7.5 87 143-235 83-184 (302)
71 3m70_A Tellurite resistance pr 98.4 2.7E-07 9.1E-12 89.7 6.9 88 143-234 131-223 (286)
72 1p91_A Ribosomal RNA large sub 98.4 1.4E-07 4.8E-12 90.7 4.6 66 163-236 115-180 (269)
73 2i62_A Nicotinamide N-methyltr 98.4 1.8E-07 6.1E-12 88.8 5.3 90 144-235 68-199 (265)
74 2zfu_A Nucleomethylin, cerebra 98.4 8.4E-07 2.9E-11 82.3 9.0 90 153-263 87-176 (215)
75 3e8s_A Putative SAM dependent 98.3 3.2E-07 1.1E-11 84.5 5.2 133 375-521 54-227 (227)
76 2fk8_A Methoxy mycolic acid sy 98.3 4.2E-07 1.4E-11 89.9 6.3 86 144-235 102-195 (318)
77 2zfu_A Nucleomethylin, cerebra 98.3 1.3E-06 4.5E-11 81.0 9.2 150 345-521 27-191 (215)
78 3d2l_A SAM-dependent methyltra 98.3 2.3E-07 7.8E-12 87.0 4.0 87 144-235 45-138 (243)
79 3pfg_A N-methyltransferase; N, 98.3 4.7E-07 1.6E-11 86.8 5.7 152 354-521 33-249 (263)
80 3m33_A Uncharacterized protein 98.3 4E-07 1.4E-11 86.0 4.4 82 143-234 59-142 (226)
81 3mti_A RRNA methylase; SAM-dep 98.3 1.2E-06 4.1E-11 79.3 7.2 90 143-235 33-136 (185)
82 3bgv_A MRNA CAP guanine-N7 met 98.3 2.5E-07 8.5E-12 91.6 2.9 90 144-235 46-156 (313)
83 1kpg_A CFA synthase;, cyclopro 98.3 2E-07 6.9E-12 90.5 2.0 98 374-481 65-168 (287)
84 3jwg_A HEN1, methyltransferase 98.2 1.2E-06 4.1E-11 81.5 6.3 160 347-521 7-210 (219)
85 1wzn_A SAM-dependent methyltra 98.2 1.1E-06 3.8E-11 83.3 6.1 89 143-235 52-146 (252)
86 3hm2_A Precorrin-6Y C5,15-meth 98.2 6.7E-06 2.3E-10 73.3 10.4 84 144-235 37-128 (178)
87 2xvm_A Tellurite resistance pr 98.2 2.3E-07 8E-12 84.1 0.7 116 375-504 34-171 (199)
88 3htx_A HEN1; HEN1, small RNA m 98.2 2E-06 6.8E-11 98.0 8.2 93 143-236 732-836 (950)
89 3g07_A 7SK snRNA methylphospha 98.2 7.5E-07 2.6E-11 88.0 4.2 56 180-235 156-221 (292)
90 3hem_A Cyclopropane-fatty-acyl 98.2 4.3E-07 1.5E-11 89.3 2.3 101 374-481 73-183 (302)
91 3h2b_A SAM-dependent methyltra 98.2 7.4E-07 2.5E-11 81.8 3.3 133 375-520 43-194 (203)
92 3ggd_A SAM-dependent methyltra 98.2 5.9E-07 2E-11 85.0 2.5 89 144-235 68-164 (245)
93 3iv6_A Putative Zn-dependent a 98.1 1.8E-06 6.2E-11 85.8 5.9 89 143-236 56-150 (261)
94 1dus_A MJ0882; hypothetical pr 98.1 1E-05 3.4E-10 72.4 10.3 88 144-235 64-158 (194)
95 1yzh_A TRNA (guanine-N(7)-)-me 98.1 8.9E-06 3E-10 75.9 9.8 94 164-264 72-180 (214)
96 2p7i_A Hypothetical protein; p 98.1 8.8E-07 3E-11 82.5 2.9 92 376-481 45-141 (250)
97 2fca_A TRNA (guanine-N(7)-)-me 98.1 7.3E-06 2.5E-10 77.3 9.2 71 164-235 69-154 (213)
98 1af7_A Chemotaxis receptor met 98.1 2.7E-06 9.2E-11 84.9 6.0 77 159-235 139-253 (274)
99 3dp7_A SAM-dependent methyltra 98.1 3.9E-06 1.3E-10 85.5 7.0 70 164-235 210-288 (363)
100 3evz_A Methyltransferase; NYSG 98.1 1.5E-05 5.3E-10 74.5 10.5 95 162-261 84-201 (230)
101 3ocj_A Putative exported prote 98.1 2.6E-06 9E-11 84.1 5.3 135 375-521 120-304 (305)
102 1y8c_A S-adenosylmethionine-de 98.1 5.7E-06 2E-10 77.2 7.2 115 350-480 19-141 (246)
103 3dmg_A Probable ribosomal RNA 98.1 4E-06 1.4E-10 87.2 6.6 120 143-273 244-371 (381)
104 4e2x_A TCAB9; kijanose, tetron 98.0 4.5E-07 1.5E-11 93.4 -0.7 145 346-503 80-250 (416)
105 3bkx_A SAM-dependent methyltra 98.0 1.5E-06 5.1E-11 83.4 2.8 66 169-235 86-160 (275)
106 2fk8_A Methoxy mycolic acid sy 98.0 1.1E-06 3.6E-11 86.9 1.7 98 374-481 91-194 (318)
107 1xtp_A LMAJ004091AAA; SGPP, st 98.0 4.8E-07 1.7E-11 85.5 -0.8 125 369-503 89-235 (254)
108 3i53_A O-methyltransferase; CO 98.0 6.1E-06 2.1E-10 82.4 7.0 69 164-235 200-275 (332)
109 2r3s_A Uncharacterized protein 98.0 3E-06 1E-10 84.0 4.7 73 161-235 193-272 (335)
110 3ofk_A Nodulation protein S; N 98.0 1.4E-06 4.8E-11 80.7 2.2 106 365-481 43-154 (216)
111 3dlc_A Putative S-adenosyl-L-m 98.0 2.8E-06 9.4E-11 77.7 4.1 94 376-481 46-148 (219)
112 3dli_A Methyltransferase; PSI- 98.0 3.2E-07 1.1E-11 86.9 -2.4 95 375-481 43-140 (240)
113 3bxo_A N,N-dimethyltransferase 98.0 3.4E-06 1.2E-10 78.8 4.4 117 352-481 21-141 (239)
114 3lbf_A Protein-L-isoaspartate 98.0 4.9E-06 1.7E-10 76.8 5.3 84 143-236 88-176 (210)
115 2qe6_A Uncharacterized protein 98.0 5.4E-06 1.8E-10 81.9 5.9 73 164-236 111-198 (274)
116 3mti_A RRNA methylase; SAM-dep 98.0 3.5E-06 1.2E-10 76.3 4.2 146 369-520 20-183 (185)
117 3eey_A Putative rRNA methylase 98.0 3.4E-06 1.1E-10 77.2 4.1 143 369-522 20-189 (197)
118 3grz_A L11 mtase, ribosomal pr 98.0 1.2E-05 4.1E-10 74.1 7.8 106 144-263 72-182 (205)
119 3fpf_A Mtnas, putative unchara 98.0 6.3E-06 2.2E-10 83.7 6.4 66 164-235 153-223 (298)
120 3grz_A L11 mtase, ribosomal pr 98.0 9.7E-06 3.3E-10 74.7 7.1 115 375-503 62-182 (205)
121 3ou2_A SAM-dependent methyltra 98.0 8.4E-07 2.9E-11 81.5 -0.2 95 375-481 48-146 (218)
122 3dxy_A TRNA (guanine-N(7)-)-me 98.0 3.6E-06 1.2E-10 80.3 4.0 71 164-235 65-151 (218)
123 4hg2_A Methyltransferase type 98.0 1.2E-06 4.2E-11 86.1 0.8 94 375-480 41-134 (257)
124 3p9n_A Possible methyltransfer 98.0 5.2E-06 1.8E-10 75.9 4.9 92 143-236 55-155 (189)
125 3l8d_A Methyltransferase; stru 98.0 1.7E-06 5.7E-11 81.2 1.5 115 375-502 55-196 (242)
126 3thr_A Glycine N-methyltransfe 97.9 1.1E-06 3.9E-11 85.2 -0.1 102 374-481 58-175 (293)
127 2ift_A Putative methylase HI07 97.9 3.1E-06 1.1E-10 79.0 2.8 118 143-276 64-197 (201)
128 3lcc_A Putative methyl chlorid 97.9 1.6E-05 5.6E-10 74.7 7.7 117 375-503 68-204 (235)
129 2pwy_A TRNA (adenine-N(1)-)-me 97.9 1.9E-05 6.5E-10 74.8 8.1 66 164-235 128-199 (258)
130 2ip2_A Probable phenazine-spec 97.9 5.2E-06 1.8E-10 82.6 4.5 54 180-235 219-273 (334)
131 2o57_A Putative sarcosine dime 97.9 2E-06 6.9E-11 83.8 1.4 95 374-481 83-187 (297)
132 3e05_A Precorrin-6Y C5,15-meth 97.9 5.6E-05 1.9E-09 69.7 11.1 103 144-259 52-161 (204)
133 1qzz_A RDMB, aclacinomycin-10- 97.9 7.5E-06 2.6E-10 82.7 5.5 69 164-235 213-288 (374)
134 3i9f_A Putative type 11 methyl 97.9 6.4E-06 2.2E-10 73.4 4.4 127 374-521 18-160 (170)
135 3hnr_A Probable methyltransfer 97.9 1.5E-05 5.2E-10 73.7 7.0 132 374-521 46-212 (220)
136 3gwz_A MMCR; methyltransferase 97.9 1.3E-05 4.3E-10 81.9 7.0 69 164-235 233-308 (369)
137 3cgg_A SAM-dependent methyltra 97.9 9.1E-06 3.1E-10 72.8 5.2 136 375-521 48-195 (195)
138 3hp7_A Hemolysin, putative; st 97.9 9.2E-06 3.2E-10 82.1 5.8 86 143-235 96-186 (291)
139 3eey_A Putative rRNA methylase 97.9 2.2E-05 7.5E-10 71.7 7.6 74 162-235 52-140 (197)
140 1yb2_A Hypothetical protein TA 97.9 2.1E-05 7.2E-10 76.7 8.0 84 143-236 121-213 (275)
141 2i62_A Nicotinamide N-methyltr 97.9 5.8E-06 2E-10 78.4 3.9 124 373-503 56-236 (265)
142 2ex4_A Adrenal gland protein A 97.9 4.4E-06 1.5E-10 79.1 3.0 120 374-503 80-222 (241)
143 3mgg_A Methyltransferase; NYSG 97.9 1.8E-06 6.3E-11 83.0 0.4 118 352-481 16-142 (276)
144 3njr_A Precorrin-6Y methylase; 97.9 5.6E-05 1.9E-09 70.9 10.5 84 143-235 66-155 (204)
145 1x19_A CRTF-related protein; m 97.9 1.1E-05 3.9E-10 81.4 5.9 69 164-235 221-296 (359)
146 3q87_B N6 adenine specific DNA 97.9 4.2E-05 1.4E-09 69.5 9.1 103 143-261 34-144 (170)
147 1vbf_A 231AA long hypothetical 97.9 7.7E-06 2.6E-10 76.6 4.2 83 144-236 82-167 (231)
148 1xdz_A Methyltransferase GIDB; 97.9 3.9E-05 1.3E-09 73.1 9.0 67 164-235 101-175 (240)
149 1vl5_A Unknown conserved prote 97.9 3.6E-06 1.2E-10 80.5 1.7 95 373-481 37-140 (260)
150 3cc8_A Putative methyltransfer 97.9 3.2E-06 1.1E-10 77.9 1.3 97 373-481 32-130 (230)
151 1nkv_A Hypothetical protein YJ 97.8 2.5E-06 8.5E-11 80.8 0.4 93 375-481 38-140 (256)
152 1i9g_A Hypothetical protein RV 97.8 1.2E-05 4.2E-10 77.5 5.2 84 143-235 110-204 (280)
153 2yqz_A Hypothetical protein TT 97.8 7.8E-06 2.7E-10 77.4 3.7 94 374-480 40-140 (263)
154 3ckk_A TRNA (guanine-N(7)-)-me 97.8 1.4E-05 4.6E-10 77.3 5.4 71 164-235 77-169 (235)
155 3m70_A Tellurite resistance pr 97.8 6.8E-06 2.3E-10 79.8 3.3 116 374-503 121-257 (286)
156 3bus_A REBM, methyltransferase 97.8 4E-06 1.4E-10 80.3 1.6 94 374-481 62-166 (273)
157 1dus_A MJ0882; hypothetical pr 97.8 4E-06 1.4E-10 75.0 1.5 116 374-502 53-179 (194)
158 3hm2_A Precorrin-6Y C5,15-meth 97.8 2.2E-05 7.6E-10 69.9 6.3 112 374-501 26-148 (178)
159 3gdh_A Trimethylguanosine synt 97.8 1.1E-06 3.7E-11 83.1 -2.5 87 143-234 89-181 (241)
160 3u81_A Catechol O-methyltransf 97.8 3.6E-05 1.2E-09 72.3 7.8 70 164-235 90-171 (221)
161 3mq2_A 16S rRNA methyltransfer 97.8 8.4E-06 2.9E-10 75.8 3.3 88 143-235 38-141 (218)
162 2pjd_A Ribosomal RNA small sub 97.8 2.3E-05 7.9E-10 79.3 6.8 103 161-272 224-334 (343)
163 1jsx_A Glucose-inhibited divis 97.8 1.1E-05 3.8E-10 74.1 4.0 128 375-521 67-205 (207)
164 2avn_A Ubiquinone/menaquinone 97.8 8.3E-06 2.8E-10 78.4 3.3 116 352-481 35-152 (260)
165 1fp1_D Isoliquiritigenin 2'-O- 97.8 4.9E-06 1.7E-10 84.8 1.8 66 164-234 240-306 (372)
166 1xxl_A YCGJ protein; structura 97.8 4E-06 1.4E-10 79.6 1.0 95 374-481 22-124 (239)
167 1xdz_A Methyltransferase GIDB; 97.8 2.6E-05 8.8E-10 74.3 6.5 136 374-524 71-222 (240)
168 3ccf_A Cyclopropane-fatty-acyl 97.8 7.7E-06 2.6E-10 79.2 2.9 95 373-481 57-154 (279)
169 3e23_A Uncharacterized protein 97.8 4.3E-06 1.5E-10 77.2 1.1 116 375-502 45-178 (211)
170 3sm3_A SAM-dependent methyltra 97.8 7.5E-06 2.6E-10 75.9 2.4 97 375-481 32-141 (235)
171 3ujc_A Phosphoethanolamine N-m 97.8 2E-06 6.7E-11 81.5 -1.7 98 373-481 55-159 (266)
172 2frn_A Hypothetical protein PH 97.8 3.6E-05 1.2E-09 75.8 7.3 112 143-262 136-253 (278)
173 1l3i_A Precorrin-6Y methyltran 97.8 3.3E-05 1.1E-09 68.9 6.4 101 144-258 45-152 (192)
174 1ej0_A FTSJ; methyltransferase 97.8 2.1E-05 7.3E-10 68.7 5.0 133 375-521 24-178 (180)
175 2aot_A HMT, histamine N-methyl 97.8 4.2E-06 1.4E-10 82.1 0.5 97 374-480 53-171 (292)
176 3ege_A Putative methyltransfer 97.8 1.2E-05 4.1E-10 77.5 3.6 95 374-481 35-130 (261)
177 4dzr_A Protein-(glutamine-N5) 97.8 1.5E-05 5.2E-10 72.6 4.1 165 349-521 12-205 (215)
178 1vlm_A SAM-dependent methyltra 97.8 7.2E-06 2.5E-10 76.6 1.9 111 375-502 49-184 (219)
179 2yxd_A Probable cobalt-precorr 97.8 0.0001 3.4E-09 65.4 9.3 108 144-268 47-159 (183)
180 2fpo_A Methylase YHHF; structu 97.7 2.1E-05 7.2E-10 73.4 5.1 90 143-236 65-162 (202)
181 1tw3_A COMT, carminomycin 4-O- 97.7 1.8E-05 6.1E-10 79.6 4.8 69 164-235 214-289 (360)
182 1fp2_A Isoflavone O-methyltran 97.7 9.5E-06 3.2E-10 81.9 2.8 67 164-235 219-289 (352)
183 4htf_A S-adenosylmethionine-de 97.7 9.5E-06 3.3E-10 78.7 2.7 95 375-481 70-173 (285)
184 1ve3_A Hypothetical protein PH 97.7 8.7E-06 3E-10 75.3 2.3 117 353-482 20-143 (227)
185 3mb5_A SAM-dependent methyltra 97.7 2.5E-05 8.7E-10 74.3 5.3 83 143-235 104-195 (255)
186 3f4k_A Putative methyltransfer 97.7 4.2E-06 1.4E-10 79.3 -0.2 93 375-481 48-150 (257)
187 3p2e_A 16S rRNA methylase; met 97.7 1.1E-05 3.9E-10 77.2 2.8 86 144-234 36-139 (225)
188 1nt2_A Fibrillarin-like PRE-rR 97.7 3.1E-05 1E-09 73.3 5.8 67 164-235 88-162 (210)
189 3kkz_A Uncharacterized protein 97.7 5.3E-06 1.8E-10 79.7 0.5 95 374-481 47-150 (267)
190 3q7e_A Protein arginine N-meth 97.7 4.2E-05 1.4E-09 77.9 7.0 86 144-233 78-172 (349)
191 3dh0_A SAM dependent methyltra 97.7 1.1E-05 3.8E-10 74.6 2.4 131 375-521 39-193 (219)
192 2gs9_A Hypothetical protein TT 97.7 1.6E-05 5.5E-10 73.2 3.5 93 374-481 37-132 (211)
193 3evz_A Methyltransferase; NYSG 97.7 2.6E-05 8.7E-10 73.0 4.9 141 375-520 57-219 (230)
194 2kw5_A SLR1183 protein; struct 97.7 1.6E-06 5.5E-11 79.4 -3.4 111 376-502 32-167 (202)
195 1l3i_A Precorrin-6Y methyltran 97.7 7.4E-06 2.5E-10 73.2 1.0 112 375-502 35-156 (192)
196 3gu3_A Methyltransferase; alph 97.7 1.6E-05 5.3E-10 77.7 3.3 98 372-482 21-127 (284)
197 3d2l_A SAM-dependent methyltra 97.7 8.2E-06 2.8E-10 76.3 1.1 94 375-480 35-136 (243)
198 3g5l_A Putative S-adenosylmeth 97.7 9.8E-06 3.3E-10 76.9 1.5 101 368-480 39-144 (253)
199 2fyt_A Protein arginine N-meth 97.7 2.4E-05 8.1E-10 79.6 4.4 67 164-232 94-169 (340)
200 2qm3_A Predicted methyltransfe 97.7 0.00022 7.6E-09 73.1 11.7 106 163-272 201-315 (373)
201 2pxx_A Uncharacterized protein 97.7 1.1E-05 3.7E-10 73.7 1.6 139 375-520 44-197 (215)
202 3dtn_A Putative methyltransfer 97.6 5.4E-06 1.8E-10 77.6 -0.7 96 374-481 45-148 (234)
203 3q87_B N6 adenine specific DNA 97.6 5.6E-05 1.9E-09 68.6 6.1 133 376-519 26-160 (170)
204 3lpm_A Putative methyltransfer 97.6 7.6E-05 2.6E-09 72.0 7.1 92 143-236 60-178 (259)
205 3hp7_A Hemolysin, putative; st 97.6 4.4E-05 1.5E-09 77.1 5.6 129 375-520 87-249 (291)
206 1ws6_A Methyltransferase; stru 97.6 1.7E-05 5.9E-10 70.0 2.1 89 143-237 52-150 (171)
207 3g5t_A Trans-aconitate 3-methy 97.6 9.2E-06 3.1E-10 79.6 0.3 94 373-479 36-147 (299)
208 3reo_A (ISO)eugenol O-methyltr 97.6 3.1E-05 1.1E-09 79.2 4.2 67 164-235 234-301 (368)
209 3jwh_A HEN1; methyltransferase 97.6 4.9E-05 1.7E-09 70.5 5.2 119 375-503 31-189 (217)
210 1dl5_A Protein-L-isoaspartate 97.6 3.4E-05 1.1E-09 77.2 4.1 66 164-236 107-177 (317)
211 3sso_A Methyltransferase; macr 97.6 1.5E-05 5.2E-10 84.4 1.6 95 154-259 249-360 (419)
212 3e05_A Precorrin-6Y C5,15-meth 97.6 2.6E-05 9E-10 71.9 3.0 143 340-502 10-164 (204)
213 2ipx_A RRNA 2'-O-methyltransfe 97.6 4.9E-05 1.7E-09 71.8 4.9 69 164-236 109-184 (233)
214 3p9c_A Caffeic acid O-methyltr 97.6 3.8E-05 1.3E-09 78.5 4.2 67 164-235 232-299 (364)
215 2p35_A Trans-aconitate 2-methy 97.6 9.2E-06 3.1E-10 76.9 -0.4 94 373-481 33-132 (259)
216 3bkw_A MLL3908 protein, S-aden 97.6 1.5E-05 5.3E-10 74.4 1.0 97 373-481 43-144 (243)
217 3r0q_C Probable protein argini 97.6 4E-05 1.4E-09 78.9 4.1 118 357-481 47-169 (376)
218 3r0q_C Probable protein argini 97.5 4.8E-05 1.6E-09 78.3 4.7 87 144-235 75-170 (376)
219 3mcz_A O-methyltransferase; ad 97.5 5.7E-05 2E-09 75.7 5.1 68 168-235 213-288 (352)
220 4dcm_A Ribosomal RNA large sub 97.5 0.00015 5.1E-09 75.0 8.4 121 143-274 233-367 (375)
221 2yvl_A TRMI protein, hypotheti 97.5 9.5E-05 3.2E-09 69.6 6.3 84 143-235 102-191 (248)
222 1fbn_A MJ fibrillarin homologu 97.5 7.7E-05 2.6E-09 70.5 5.6 64 164-233 105-177 (230)
223 1i1n_A Protein-L-isoaspartate 97.5 3.9E-05 1.3E-09 71.7 3.5 67 164-237 109-185 (226)
224 3opn_A Putative hemolysin; str 97.5 0.00012 4E-09 70.9 6.9 131 375-521 39-202 (232)
225 1nt2_A Fibrillarin-like PRE-rR 97.5 3.3E-05 1.1E-09 73.1 2.9 129 375-520 59-209 (210)
226 2fhp_A Methylase, putative; al 97.5 3.7E-05 1.3E-09 68.9 3.1 90 143-236 55-156 (187)
227 2nxc_A L11 mtase, ribosomal pr 97.5 2.8E-05 9.5E-10 75.5 2.3 112 375-503 122-241 (254)
228 3uwp_A Histone-lysine N-methyl 97.5 4.1E-05 1.4E-09 81.4 3.6 55 179-235 233-289 (438)
229 3tfw_A Putative O-methyltransf 97.5 9.7E-05 3.3E-09 71.1 5.9 68 164-235 95-171 (248)
230 3lpm_A Putative methyltransfer 97.5 9.1E-05 3.1E-09 71.4 5.7 126 374-501 50-196 (259)
231 3orh_A Guanidinoacetate N-meth 97.5 1.1E-05 3.8E-10 77.3 -0.8 101 375-481 62-170 (236)
232 3g2m_A PCZA361.24; SAM-depende 97.5 1.5E-05 5.2E-10 78.1 -0.0 95 376-481 85-190 (299)
233 1o54_A SAM-dependent O-methylt 97.5 0.00025 8.7E-09 68.8 8.7 65 164-235 144-214 (277)
234 2esr_A Methyltransferase; stru 97.5 3.2E-05 1.1E-09 69.4 2.1 90 143-236 42-140 (177)
235 1jsx_A Glucose-inhibited divis 97.5 0.00015 5E-09 66.5 6.5 67 163-235 95-166 (207)
236 2bm8_A Cephalosporin hydroxyla 97.5 9.2E-05 3.2E-09 71.2 5.3 132 375-520 83-233 (236)
237 3lst_A CALO1 methyltransferase 97.5 9.6E-05 3.3E-09 74.6 5.7 53 180-235 234-287 (348)
238 1wzn_A SAM-dependent methyltra 97.5 3E-05 1E-09 73.4 1.8 96 374-480 42-144 (252)
239 1ej0_A FTSJ; methyltransferase 97.5 2.8E-05 9.5E-10 67.9 1.4 56 180-235 64-137 (180)
240 3m33_A Uncharacterized protein 97.5 4E-05 1.4E-09 72.2 2.5 88 375-480 50-141 (226)
241 1pjz_A Thiopurine S-methyltran 97.5 4E-05 1.4E-09 71.6 2.5 118 375-503 24-173 (203)
242 2vdv_E TRNA (guanine-N(7)-)-me 97.5 9E-05 3.1E-09 70.9 5.0 71 164-235 80-174 (246)
243 2yxe_A Protein-L-isoaspartate 97.5 7.3E-05 2.5E-09 69.1 4.1 65 164-236 109-179 (215)
244 3bgv_A MRNA CAP guanine-N7 met 97.4 3.1E-05 1.1E-09 76.5 1.6 112 360-482 23-156 (313)
245 4dzr_A Protein-(glutamine-N5) 97.4 1.2E-05 4.2E-10 73.2 -1.2 89 143-235 41-166 (215)
246 3i53_A O-methyltransferase; CO 97.4 4.4E-05 1.5E-09 76.2 2.6 136 368-520 164-331 (332)
247 3q7e_A Protein arginine N-meth 97.4 2.8E-05 9.7E-10 79.1 1.3 99 375-480 68-172 (349)
248 1zx0_A Guanidinoacetate N-meth 97.4 1.3E-05 4.6E-10 75.8 -1.1 100 375-481 62-170 (236)
249 3lst_A CALO1 methyltransferase 97.4 3.9E-05 1.3E-09 77.4 2.2 136 368-520 179-347 (348)
250 2yxd_A Probable cobalt-precorr 97.4 6.3E-05 2.1E-09 66.7 3.2 110 375-503 37-154 (183)
251 1qzz_A RDMB, aclacinomycin-10- 97.4 4.1E-05 1.4E-09 77.2 2.2 139 370-521 179-356 (374)
252 3duw_A OMT, O-methyltransferas 97.4 2.7E-05 9.1E-10 72.7 0.7 132 374-521 59-222 (223)
253 3g89_A Ribosomal RNA small sub 97.4 0.00026 8.8E-09 68.9 7.6 66 164-234 111-184 (249)
254 2b3t_A Protein methyltransfera 97.4 4.7E-05 1.6E-09 74.1 2.2 140 375-520 111-275 (276)
255 2ip2_A Probable phenazine-spec 97.4 8.3E-05 2.9E-09 73.9 4.1 133 369-520 164-333 (334)
256 2b3t_A Protein methyltransfera 97.4 0.00018 6.2E-09 70.0 6.4 73 162-235 138-239 (276)
257 2plw_A Ribosomal RNA methyltra 97.4 0.0001 3.5E-09 67.3 4.2 132 375-520 24-195 (201)
258 1zg3_A Isoflavanone 4'-O-methy 97.4 4.9E-05 1.7E-09 76.8 2.3 67 164-235 224-294 (358)
259 3u81_A Catechol O-methyltransf 97.4 3.5E-05 1.2E-09 72.3 1.1 133 374-521 59-213 (221)
260 2p8j_A S-adenosylmethionine-de 97.4 2.3E-05 8E-10 71.7 -0.2 96 375-481 25-128 (209)
261 3dp7_A SAM-dependent methyltra 97.4 2.3E-05 7.7E-10 79.8 -0.3 98 372-481 178-287 (363)
262 1o9g_A RRNA methyltransferase; 97.4 0.00011 3.7E-09 70.3 4.4 54 182-235 149-215 (250)
263 4fsd_A Arsenic methyltransfera 97.4 2.4E-05 8.3E-10 80.3 -0.2 94 375-481 85-203 (383)
264 3vc1_A Geranyl diphosphate 2-C 97.4 5.6E-05 1.9E-09 74.8 2.4 95 372-481 116-221 (312)
265 3ntv_A MW1564 protein; rossman 97.4 6.8E-05 2.3E-09 71.3 2.9 127 374-521 72-231 (232)
266 3g89_A Ribosomal RNA small sub 97.4 0.00015 5E-09 70.6 5.3 137 374-525 81-233 (249)
267 3bwc_A Spermidine synthase; SA 97.4 0.00017 5.8E-09 72.1 5.9 90 144-235 107-211 (304)
268 1jg1_A PIMT;, protein-L-isoasp 97.4 8.8E-05 3E-09 70.2 3.6 65 164-236 121-191 (235)
269 1ixk_A Methyltransferase; open 97.4 0.00014 4.8E-09 73.1 5.2 94 164-260 150-269 (315)
270 2nxc_A L11 mtase, ribosomal pr 97.4 8.2E-05 2.8E-09 72.2 3.3 105 144-262 132-240 (254)
271 2frn_A Hypothetical protein PH 97.3 6.6E-05 2.3E-09 73.9 2.6 113 375-502 127-253 (278)
272 1g6q_1 HnRNP arginine N-methyl 97.3 0.00021 7.2E-09 72.0 6.4 65 169-233 72-144 (328)
273 1g6q_1 HnRNP arginine N-methyl 97.3 4.4E-05 1.5E-09 77.0 1.2 95 375-479 40-143 (328)
274 3giw_A Protein of unknown func 97.3 8.8E-05 3E-09 74.7 3.4 72 164-235 112-201 (277)
275 2g72_A Phenylethanolamine N-me 97.3 4.1E-05 1.4E-09 74.6 0.9 63 434-501 173-251 (289)
276 3njr_A Precorrin-6Y methylase; 97.3 5.8E-05 2E-09 70.7 1.9 110 375-502 57-176 (204)
277 1x19_A CRTF-related protein; m 97.3 0.00012 4.1E-09 73.9 4.2 98 369-481 186-295 (359)
278 2bm8_A Cephalosporin hydroxyla 97.3 4.7E-05 1.6E-09 73.3 1.0 72 155-235 112-188 (236)
279 3tfw_A Putative O-methyltransf 97.3 0.00015 5.2E-09 69.8 4.5 132 374-521 64-225 (248)
280 3dr5_A Putative O-methyltransf 97.3 9.2E-05 3.1E-09 70.7 2.9 67 164-234 88-163 (221)
281 1ri5_A MRNA capping enzyme; me 97.3 2.7E-05 9.2E-10 75.0 -0.8 100 375-482 66-175 (298)
282 3ntv_A MW1564 protein; rossman 97.3 0.00012 4.1E-09 69.6 3.7 67 164-234 102-176 (232)
283 2pbf_A Protein-L-isoaspartate 97.3 6E-05 2.1E-09 70.5 1.4 66 164-236 116-195 (227)
284 3opn_A Putative hemolysin; str 97.3 2.4E-05 8.1E-10 75.7 -1.5 80 143-234 48-137 (232)
285 2ozv_A Hypothetical protein AT 97.3 0.00028 9.6E-09 68.6 6.1 77 159-235 62-171 (260)
286 2y1w_A Histone-arginine methyl 97.3 0.00011 3.7E-09 74.7 3.2 110 360-480 37-154 (348)
287 2b25_A Hypothetical protein; s 97.3 0.00013 4.3E-09 73.2 3.5 66 164-235 137-220 (336)
288 2r3s_A Uncharacterized protein 97.3 0.00015 5.2E-09 71.7 4.0 135 372-521 164-335 (335)
289 4gek_A TRNA (CMO5U34)-methyltr 97.2 2.2E-05 7.5E-10 77.2 -2.1 96 376-481 73-178 (261)
290 3c3p_A Methyltransferase; NP_9 97.2 0.00028 9.7E-09 65.3 5.3 67 164-235 88-161 (210)
291 3mcz_A O-methyltransferase; ad 97.2 9E-05 3.1E-09 74.3 2.0 138 369-521 174-349 (352)
292 3tr6_A O-methyltransferase; ce 97.2 6.6E-05 2.3E-09 69.9 0.9 127 375-521 66-224 (225)
293 3gwz_A MMCR; methyltransferase 97.2 6.9E-05 2.4E-09 76.4 1.1 137 368-521 197-369 (369)
294 1yzh_A TRNA (guanine-N(7)-)-me 97.2 0.00022 7.6E-09 66.4 4.2 124 375-503 43-179 (214)
295 1tw3_A COMT, carminomycin 4-O- 97.2 0.00017 5.8E-09 72.4 3.4 140 369-521 179-356 (360)
296 2igt_A SAM dependent methyltra 97.2 0.0003 1E-08 71.6 5.2 90 143-235 164-273 (332)
297 3tma_A Methyltransferase; thum 97.2 0.00042 1.4E-08 70.1 6.3 72 164-235 235-318 (354)
298 3dou_A Ribosomal RNA large sub 97.2 0.00059 2E-08 63.6 6.8 136 375-521 27-181 (191)
299 3iv6_A Putative Zn-dependent a 97.2 6.5E-05 2.2E-09 74.6 0.2 96 375-481 47-148 (261)
300 1g8a_A Fibrillarin-like PRE-rR 97.2 9.6E-05 3.3E-09 69.2 1.3 129 375-521 75-227 (227)
301 1r18_A Protein-L-isoaspartate( 97.2 0.00036 1.2E-08 65.5 5.3 65 164-236 121-196 (227)
302 2y1w_A Histone-arginine methyl 97.2 0.00045 1.5E-08 70.2 6.3 66 169-235 84-156 (348)
303 2fyt_A Protein arginine N-meth 97.1 0.00011 3.8E-09 74.6 1.7 110 359-478 50-168 (340)
304 2gb4_A Thiopurine S-methyltran 97.1 7.6E-05 2.6E-09 72.9 0.4 118 375-503 70-224 (252)
305 2ipx_A RRNA 2'-O-methyltransfe 97.1 8.7E-05 3E-09 70.0 0.6 134 375-520 79-231 (233)
306 2gpy_A O-methyltransferase; st 97.1 0.00019 6.5E-09 67.6 2.9 67 164-234 85-160 (233)
307 4df3_A Fibrillarin-like rRNA/T 97.1 0.00023 7.8E-09 69.7 3.4 68 164-234 109-182 (233)
308 3r3h_A O-methyltransferase, SA 97.1 0.0004 1.4E-08 67.0 5.1 130 374-521 61-220 (242)
309 2a14_A Indolethylamine N-methy 97.1 7.8E-05 2.7E-09 72.2 0.1 43 434-481 155-197 (263)
310 1g8a_A Fibrillarin-like PRE-rR 97.1 0.00058 2E-08 63.8 6.0 68 164-234 105-178 (227)
311 2vdw_A Vaccinia virus capping 97.1 7.5E-05 2.6E-09 74.8 -0.1 100 375-482 50-170 (302)
312 2h00_A Methyltransferase 10 do 97.1 7.8E-05 2.7E-09 71.1 -0.0 71 163-233 95-191 (254)
313 3a27_A TYW2, uncharacterized p 97.1 0.001 3.6E-08 65.2 7.9 84 143-235 130-220 (272)
314 3ggd_A SAM-dependent methyltra 97.1 3.2E-05 1.1E-09 73.0 -2.9 97 375-481 58-163 (245)
315 3ajd_A Putative methyltransfer 97.1 0.00051 1.7E-08 67.3 5.4 97 143-242 94-219 (274)
316 2wa2_A Non-structural protein 97.0 7.6E-05 2.6E-09 74.3 -0.5 84 143-235 93-194 (276)
317 2oxt_A Nucleoside-2'-O-methylt 97.0 0.00017 5.7E-09 71.3 1.9 139 375-520 76-227 (265)
318 3g07_A 7SK snRNA methylphospha 97.0 4.8E-05 1.6E-09 75.0 -2.0 46 433-481 175-220 (292)
319 3id6_C Fibrillarin-like rRNA/T 97.0 0.00014 4.9E-09 70.9 1.2 135 375-522 78-232 (232)
320 3tr6_A O-methyltransferase; ce 97.0 0.00021 7E-09 66.6 2.2 68 164-235 96-175 (225)
321 2yxl_A PH0851 protein, 450AA l 97.0 0.0013 4.4E-08 69.3 8.5 76 163-238 290-393 (450)
322 2vdv_E TRNA (guanine-N(7)-)-me 97.0 0.00014 4.9E-09 69.5 0.9 119 375-498 51-191 (246)
323 3bzb_A Uncharacterized protein 97.0 0.00046 1.6E-08 67.8 4.6 42 193-235 160-206 (281)
324 3bkx_A SAM-dependent methyltra 97.0 0.00062 2.1E-08 65.1 5.3 98 375-481 45-159 (275)
325 3fpf_A Mtnas, putative unchara 97.0 0.00014 4.9E-09 73.8 0.9 129 374-521 123-264 (298)
326 3fzg_A 16S rRNA methylase; met 97.0 0.00013 4.4E-09 70.4 0.4 88 143-233 60-151 (200)
327 2oxt_A Nucleoside-2'-O-methylt 97.0 8.8E-05 3E-09 73.3 -0.7 84 143-235 85-186 (265)
328 4azs_A Methyltransferase WBDD; 97.0 0.00011 3.7E-09 79.8 -0.3 89 143-234 73-173 (569)
329 3duw_A OMT, O-methyltransferas 97.0 0.00038 1.3E-08 64.8 3.5 68 164-235 90-168 (223)
330 2fca_A TRNA (guanine-N(7)-)-me 97.0 0.00032 1.1E-08 66.0 3.0 122 375-501 40-174 (213)
331 1vbf_A 231AA long hypothetical 96.9 0.00014 4.7E-09 68.0 0.2 89 375-482 72-166 (231)
332 3dxy_A TRNA (guanine-N(7)-)-me 96.9 0.00014 4.7E-09 69.3 0.0 122 374-499 35-170 (218)
333 2esr_A Methyltransferase; stru 96.9 3.2E-05 1.1E-09 69.4 -4.2 96 375-482 33-139 (177)
334 3tm4_A TRNA (guanine N2-)-meth 96.9 0.0022 7.5E-08 65.8 8.7 90 162-262 246-348 (373)
335 2p41_A Type II methyltransfera 96.9 0.00051 1.7E-08 69.2 3.7 100 375-480 84-190 (305)
336 3gdh_A Trimethylguanosine synt 96.9 4.2E-05 1.4E-09 72.2 -4.1 93 375-481 80-181 (241)
337 3b3j_A Histone-arginine methyl 96.8 0.00057 1.9E-08 73.1 3.9 69 164-234 188-263 (480)
338 2pwy_A TRNA (adenine-N(1)-)-me 96.8 0.00084 2.9E-08 63.4 4.7 106 375-499 98-217 (258)
339 1uir_A Polyamine aminopropyltr 96.8 0.00078 2.7E-08 67.7 4.6 88 144-234 89-195 (314)
340 2hnk_A SAM-dependent O-methylt 96.8 0.00044 1.5E-08 65.6 2.5 67 164-234 92-181 (239)
341 3sso_A Methyltransferase; macr 96.8 9.7E-05 3.3E-09 78.3 -2.2 124 358-500 203-361 (419)
342 3reo_A (ISO)eugenol O-methyltr 96.8 0.00054 1.9E-08 70.0 3.4 95 371-481 201-300 (368)
343 3lbf_A Protein-L-isoaspartate 96.8 0.00021 7.2E-09 65.8 0.1 90 374-482 78-175 (210)
344 3id6_C Fibrillarin-like rRNA/T 96.8 0.00068 2.3E-08 66.1 3.7 76 155-235 104-182 (232)
345 3ckk_A TRNA (guanine-N(7)-)-me 96.8 0.00043 1.5E-08 66.7 2.2 123 374-501 47-190 (235)
346 2hnk_A SAM-dependent O-methylt 96.7 0.00028 9.7E-09 66.9 0.7 125 375-522 62-232 (239)
347 3cbg_A O-methyltransferase; cy 96.7 0.00018 6E-09 68.5 -0.8 125 375-521 74-232 (232)
348 2frx_A Hypothetical protein YE 96.7 0.0016 5.6E-08 69.6 6.6 77 164-240 149-252 (479)
349 2ozv_A Hypothetical protein AT 96.7 0.00077 2.6E-08 65.5 3.7 125 373-500 36-188 (260)
350 1iy9_A Spermidine synthase; ro 96.7 0.0019 6.4E-08 63.7 6.5 89 144-235 87-190 (275)
351 1ws6_A Methyltransferase; stru 96.7 6.2E-05 2.1E-09 66.3 -3.8 94 375-482 43-148 (171)
352 2plw_A Ribosomal RNA methyltra 96.7 0.0011 3.8E-08 60.4 4.4 55 180-235 65-155 (201)
353 3m6w_A RRNA methylase; rRNA me 96.7 0.00053 1.8E-08 73.4 2.4 76 164-239 133-234 (464)
354 1xj5_A Spermidine synthase 1; 96.7 0.0034 1.1E-07 64.1 8.3 75 160-235 147-236 (334)
355 1u2z_A Histone-lysine N-methyl 96.7 0.00099 3.4E-08 70.8 4.5 54 180-235 303-360 (433)
356 1p91_A Ribosomal RNA large sub 96.7 0.00047 1.6E-08 66.0 1.8 87 375-481 87-178 (269)
357 2gpy_A O-methyltransferase; st 96.7 0.00022 7.6E-09 67.1 -0.4 92 375-481 56-160 (233)
358 3b5i_A S-adenosyl-L-methionine 96.7 0.00071 2.4E-08 70.6 3.3 45 190-235 144-226 (374)
359 3mb5_A SAM-dependent methyltra 96.7 0.00056 1.9E-08 64.9 2.1 104 375-497 95-211 (255)
360 1ne2_A Hypothetical protein TA 96.7 0.0024 8.1E-08 58.5 6.3 84 143-233 62-146 (200)
361 3gjy_A Spermidine synthase; AP 96.7 0.0016 5.3E-08 66.6 5.5 88 144-235 101-201 (317)
362 3c3p_A Methyltransferase; NP_9 96.7 0.00014 4.9E-09 67.3 -2.0 92 375-481 58-160 (210)
363 3cbg_A O-methyltransferase; cy 96.7 0.00094 3.2E-08 63.5 3.6 68 164-235 104-183 (232)
364 3p9n_A Possible methyltransfer 96.7 0.00012 4.1E-09 66.7 -2.5 122 347-482 22-154 (189)
365 2yvl_A TRMI protein, hypotheti 96.7 0.00092 3.1E-08 62.8 3.4 106 375-499 93-208 (248)
366 1inl_A Spermidine synthase; be 96.6 0.003 1E-07 62.9 7.3 89 144-235 102-206 (296)
367 4a6d_A Hydroxyindole O-methylt 96.6 0.0033 1.1E-07 63.9 7.7 67 167-235 212-284 (353)
368 1fp1_D Isoliquiritigenin 2'-O- 96.6 0.00038 1.3E-08 70.8 0.7 97 371-481 207-306 (372)
369 2i7c_A Spermidine synthase; tr 96.6 0.0024 8.2E-08 63.1 6.5 90 144-235 90-193 (283)
370 2wa2_A Non-structural protein 96.6 0.0022 7.4E-08 63.8 6.0 101 374-480 83-192 (276)
371 2o07_A Spermidine synthase; st 96.6 0.0011 3.9E-08 66.5 4.0 89 143-234 106-209 (304)
372 1sqg_A SUN protein, FMU protei 96.6 0.00093 3.2E-08 69.8 3.4 75 164-238 277-378 (429)
373 3dr5_A Putative O-methyltransf 96.6 0.00076 2.6E-08 64.3 2.5 127 376-522 59-214 (221)
374 2nyu_A Putative ribosomal RNA 96.6 0.00063 2.2E-08 61.6 1.8 139 375-520 24-186 (196)
375 3v97_A Ribosomal RNA large sub 96.6 0.001 3.6E-08 74.3 3.8 96 143-240 550-663 (703)
376 3b3j_A Histone-arginine methyl 96.6 0.00035 1.2E-08 74.7 -0.0 109 360-480 145-262 (480)
377 3p9c_A Caffeic acid O-methyltr 96.6 0.00096 3.3E-08 68.1 3.1 95 371-481 199-298 (364)
378 1fbn_A MJ fibrillarin homologu 96.6 0.00073 2.5E-08 63.8 2.0 130 375-521 76-228 (230)
379 3adn_A Spermidine synthase; am 96.5 0.002 7E-08 64.5 5.3 72 163-235 113-199 (294)
380 1i1n_A Protein-L-isoaspartate 96.5 0.00051 1.8E-08 64.0 0.8 89 375-481 79-182 (226)
381 1yb2_A Hypothetical protein TA 96.5 0.0013 4.3E-08 64.1 3.6 108 374-500 111-231 (275)
382 3p2e_A 16S rRNA methylase; met 96.5 0.00051 1.7E-08 65.7 0.7 98 375-479 26-137 (225)
383 1sui_A Caffeoyl-COA O-methyltr 96.5 0.00068 2.3E-08 65.6 1.4 67 164-234 111-190 (247)
384 2b2c_A Spermidine synthase; be 96.5 0.0016 5.3E-08 66.0 3.9 75 160-235 135-223 (314)
385 4dmg_A Putative uncharacterize 96.4 0.0024 8.1E-08 66.7 5.1 90 143-235 225-327 (393)
386 2pt6_A Spermidine synthase; tr 96.4 0.004 1.4E-07 63.0 6.4 89 144-235 128-231 (321)
387 2ift_A Putative methylase HI07 96.4 0.00043 1.5E-08 64.4 -0.9 98 375-484 55-166 (201)
388 2avd_A Catechol-O-methyltransf 96.3 0.00092 3.2E-08 62.3 1.4 125 375-521 71-229 (229)
389 1fp2_A Isoflavone O-methyltran 96.3 0.00066 2.2E-08 68.4 0.4 93 373-481 188-288 (352)
390 2b78_A Hypothetical protein SM 96.3 0.0032 1.1E-07 65.0 5.4 109 143-255 223-351 (385)
391 1r18_A Protein-L-isoaspartate( 96.3 0.00054 1.9E-08 64.3 -0.6 87 375-481 86-194 (227)
392 2cmg_A Spermidine synthase; tr 96.3 0.002 6.9E-08 63.4 3.3 77 147-235 87-172 (262)
393 1mjf_A Spermidine synthase; sp 96.2 0.0015 5.2E-08 64.4 2.3 139 374-521 76-239 (281)
394 3c3y_A Pfomt, O-methyltransfer 96.2 0.00076 2.6E-08 64.6 0.1 127 374-522 71-237 (237)
395 2pbf_A Protein-L-isoaspartate 96.2 0.00074 2.5E-08 63.0 -0.0 90 375-481 82-193 (227)
396 1nv8_A HEMK protein; class I a 96.2 0.0026 8.8E-08 63.0 3.8 154 349-521 106-282 (284)
397 1inl_A Spermidine synthase; be 96.2 0.0022 7.6E-08 63.9 3.3 143 374-522 91-253 (296)
398 2pjd_A Ribosomal RNA small sub 96.2 0.00083 2.8E-08 67.9 0.2 111 375-494 198-318 (343)
399 3adn_A Spermidine synthase; am 96.2 0.0082 2.8E-07 60.0 7.2 145 372-522 82-246 (294)
400 4dcm_A Ribosomal RNA large sub 96.2 0.00061 2.1E-08 70.4 -1.0 112 375-494 224-349 (375)
401 1mjf_A Spermidine synthase; sp 96.1 0.0016 5.4E-08 64.3 1.9 88 144-235 87-194 (281)
402 2fhp_A Methylase, putative; al 96.1 0.00033 1.1E-08 62.7 -2.8 96 375-482 46-155 (187)
403 1o54_A SAM-dependent O-methylt 96.1 0.0026 9.1E-08 61.6 3.4 105 375-499 114-232 (277)
404 1sui_A Caffeoyl-COA O-methyltr 96.1 0.0016 5.5E-08 63.0 1.7 92 374-481 80-190 (247)
405 2yxe_A Protein-L-isoaspartate 96.1 0.00085 2.9E-08 61.9 -0.3 88 375-482 79-178 (215)
406 2b25_A Hypothetical protein; s 96.1 0.0022 7.5E-08 64.2 2.6 91 375-481 107-219 (336)
407 3dmg_A Probable ribosomal RNA 96.1 0.0011 3.7E-08 68.9 0.3 111 375-494 235-355 (381)
408 2avd_A Catechol-O-methyltransf 96.1 0.0021 7.1E-08 59.9 2.2 68 164-235 101-180 (229)
409 3mq2_A 16S rRNA methyltransfer 96.1 0.0008 2.8E-08 62.3 -0.7 121 375-502 29-180 (218)
410 2xyq_A Putative 2'-O-methyl tr 96.1 0.0079 2.7E-07 60.5 6.5 54 180-235 107-172 (290)
411 4df3_A Fibrillarin-like rRNA/T 96.0 0.0029 9.8E-08 61.9 3.1 100 369-481 75-182 (233)
412 2efj_A 3,7-dimethylxanthine me 96.0 0.0016 5.4E-08 68.3 1.4 47 188-235 141-226 (384)
413 1iy9_A Spermidine synthase; ro 96.0 0.0057 1.9E-07 60.3 5.1 144 373-522 75-237 (275)
414 1zq9_A Probable dimethyladenos 95.9 0.0029 1E-07 62.6 2.7 83 143-231 39-144 (285)
415 2p41_A Type II methyltransfera 95.9 0.0056 1.9E-07 61.6 4.8 90 143-235 93-192 (305)
416 2as0_A Hypothetical protein PH 95.9 0.0019 6.5E-08 66.5 1.3 94 143-238 228-339 (396)
417 2ld4_A Anamorsin; methyltransf 95.9 0.002 6.7E-08 57.8 1.2 84 433-525 61-172 (176)
418 3htx_A HEN1; HEN1, small RNA m 95.9 0.0096 3.3E-07 68.3 6.9 97 374-481 722-834 (950)
419 3c0k_A UPF0064 protein YCCW; P 95.9 0.0023 7.9E-08 66.0 1.7 122 375-498 222-362 (396)
420 1wxx_A TT1595, hypothetical pr 95.9 0.0018 6.1E-08 66.6 0.9 93 143-238 220-329 (382)
421 1jg1_A PIMT;, protein-L-isoasp 95.9 0.0012 4.1E-08 62.4 -0.4 85 375-481 93-189 (235)
422 4a6d_A Hydroxyindole O-methylt 95.9 0.003 1E-07 64.2 2.4 140 368-522 174-347 (353)
423 2nyu_A Putative ribosomal RNA 95.8 0.0021 7.2E-08 58.1 1.0 44 192-235 93-146 (196)
424 3m4x_A NOL1/NOP2/SUN family pr 95.8 0.0026 9E-08 67.9 1.9 94 164-260 137-257 (456)
425 3c3y_A Pfomt, O-methyltransfer 95.8 0.0031 1.1E-07 60.2 2.2 67 164-234 102-181 (237)
426 1nv8_A HEMK protein; class I a 95.8 0.0096 3.3E-07 58.9 5.8 87 143-235 134-250 (284)
427 3a27_A TYW2, uncharacterized p 95.8 0.0021 7.1E-08 63.0 1.0 108 375-501 121-246 (272)
428 1zg3_A Isoflavanone 4'-O-methy 95.8 0.00098 3.4E-08 67.3 -1.5 93 373-481 193-293 (358)
429 1i9g_A Hypothetical protein RV 95.8 0.0035 1.2E-07 60.2 2.5 106 375-499 101-223 (280)
430 3c0k_A UPF0064 protein YCCW; P 95.8 0.0057 2E-07 63.0 4.2 95 143-239 231-344 (396)
431 1ixk_A Methyltransferase; open 95.8 0.0017 5.8E-08 65.2 0.2 122 375-500 120-269 (315)
432 1o9g_A RRNA methyltransferase; 95.7 0.0024 8.1E-08 60.9 1.1 50 434-483 167-216 (250)
433 2igt_A SAM dependent methyltra 95.7 0.002 6.7E-08 65.6 0.5 122 375-501 155-299 (332)
434 2fpo_A Methylase YHHF; structu 95.7 0.0014 4.8E-08 60.9 -0.8 97 375-483 56-162 (202)
435 3bzb_A Uncharacterized protein 95.7 0.0016 5.4E-08 64.0 -0.6 94 375-479 81-203 (281)
436 2xyq_A Putative 2'-O-methyl tr 95.6 0.012 4E-07 59.3 5.5 132 375-520 65-210 (290)
437 3bwc_A Spermidine synthase; SA 95.6 0.003 1E-07 63.1 1.1 142 373-521 95-258 (304)
438 1m6e_X S-adenosyl-L-methionnin 95.6 0.0077 2.6E-07 62.5 4.2 47 188-235 131-210 (359)
439 1xj5_A Spermidine synthase 1; 95.5 0.0042 1.4E-07 63.4 2.1 101 373-480 120-234 (334)
440 3tma_A Methyltransferase; thum 95.5 0.0085 2.9E-07 60.5 4.2 137 370-520 200-353 (354)
441 1af7_A Chemotaxis receptor met 95.5 0.004 1.4E-07 62.0 1.8 53 422-482 200-253 (274)
442 2qe6_A Uncharacterized protein 95.5 0.0067 2.3E-07 59.6 3.4 100 372-481 76-196 (274)
443 4hc4_A Protein arginine N-meth 95.4 0.0047 1.6E-07 64.3 2.1 115 356-480 66-188 (376)
444 1wy7_A Hypothetical protein PH 95.4 0.082 2.8E-06 48.2 10.1 105 143-260 60-169 (207)
445 2pt6_A Spermidine synthase; tr 95.4 0.0055 1.9E-07 61.9 2.4 142 374-522 117-278 (321)
446 1wy7_A Hypothetical protein PH 95.4 0.0094 3.2E-07 54.5 3.6 114 375-502 51-171 (207)
447 3r3h_A O-methyltransferase, SA 95.3 0.0058 2E-07 58.8 2.0 76 154-234 87-170 (242)
448 2yx1_A Hypothetical protein MJ 95.2 0.024 8.2E-07 57.3 6.3 81 143-235 206-292 (336)
449 2f8l_A Hypothetical protein LM 95.1 0.025 8.5E-07 56.9 6.2 77 159-236 161-258 (344)
450 3dou_A Ribosomal RNA large sub 95.1 0.007 2.4E-07 56.3 1.9 81 143-234 36-139 (191)
451 4dmg_A Putative uncharacterize 95.0 0.0035 1.2E-07 65.4 -0.4 119 375-501 216-352 (393)
452 1dl5_A Protein-L-isoaspartate 95.0 0.0032 1.1E-07 62.8 -0.9 88 375-482 77-176 (317)
453 2b2c_A Spermidine synthase; be 94.8 0.013 4.5E-07 59.2 3.0 140 374-521 109-269 (314)
454 2cmg_A Spermidine synthase; tr 94.8 0.054 1.8E-06 53.2 7.3 129 373-522 72-217 (262)
455 2h00_A Methyltransferase 10 do 94.7 0.0026 8.9E-08 60.5 -2.2 103 374-479 66-190 (254)
456 1wxx_A TT1595, hypothetical pr 94.7 0.005 1.7E-07 63.2 -0.2 121 374-501 210-351 (382)
457 1uir_A Polyamine aminopropyltr 94.7 0.0066 2.3E-07 60.9 0.6 144 374-522 78-243 (314)
458 1sqg_A SUN protein, FMU protei 94.6 0.014 4.6E-07 61.0 2.7 104 375-481 248-374 (429)
459 2jjq_A Uncharacterized RNA met 94.6 0.05 1.7E-06 57.2 7.0 85 143-236 301-389 (425)
460 1yub_A Ermam, rRNA methyltrans 94.6 0.00028 9.5E-09 67.8 -9.5 88 143-235 40-146 (245)
461 1u2z_A Histone-lysine N-methyl 94.5 0.0079 2.7E-07 63.9 0.7 106 358-481 231-359 (433)
462 2o07_A Spermidine synthase; st 94.5 0.011 3.9E-07 59.1 1.7 143 373-521 95-256 (304)
463 1boo_A Protein (N-4 cytosine-s 94.4 0.063 2.2E-06 54.1 7.0 91 181-275 16-125 (323)
464 1ne2_A Hypothetical protein TA 94.4 0.011 3.6E-07 54.1 1.1 107 375-497 53-162 (200)
465 3fzg_A 16S rRNA methylase; met 94.3 0.01 3.6E-07 57.1 0.9 128 374-520 50-197 (200)
466 1qam_A ERMC' methyltransferase 94.3 0.0062 2.1E-07 58.8 -0.7 86 143-233 41-145 (244)
467 2as0_A Hypothetical protein PH 94.2 0.0079 2.7E-07 61.9 -0.0 120 375-503 219-363 (396)
468 4hc4_A Protein arginine N-meth 94.2 0.065 2.2E-06 55.8 6.7 77 153-233 107-188 (376)
469 2i7c_A Spermidine synthase; tr 94.0 0.018 6.2E-07 56.8 2.0 142 373-521 78-239 (283)
470 3gjy_A Spermidine synthase; AP 94.0 0.018 6.2E-07 58.8 2.0 142 374-523 90-249 (317)
471 2b78_A Hypothetical protein SM 93.9 0.018 6.1E-07 59.5 1.9 137 375-519 214-384 (385)
472 2f8l_A Hypothetical protein LM 93.7 0.03 1E-06 56.4 3.0 148 371-521 128-305 (344)
473 3k6r_A Putative transferase PH 93.7 0.046 1.6E-06 54.6 4.2 136 343-503 104-254 (278)
474 4gqb_A Protein arginine N-meth 93.6 0.06 2.1E-06 59.9 5.5 126 341-479 321-465 (637)
475 2yx1_A Hypothetical protein MJ 93.6 0.017 5.9E-07 58.4 1.1 88 375-481 197-291 (336)
476 2ih2_A Modification methylase 93.5 0.089 3E-06 53.5 6.2 137 376-521 42-211 (421)
477 3kr9_A SAM-dependent methyltra 93.5 0.026 8.8E-07 54.9 2.0 123 365-503 9-140 (225)
478 3ajd_A Putative methyltransfer 93.3 0.01 3.6E-07 57.9 -1.2 102 375-480 85-210 (274)
479 2h1r_A Dimethyladenosine trans 93.2 0.079 2.7E-06 52.7 5.0 81 143-229 53-154 (299)
480 3frh_A 16S rRNA methylase; met 93.1 0.081 2.8E-06 52.6 4.8 69 163-232 132-204 (253)
481 1uwv_A 23S rRNA (uracil-5-)-me 93.1 0.17 5.9E-06 52.8 7.6 86 143-236 297-391 (433)
482 3b5i_A S-adenosyl-L-methionine 93.0 0.036 1.2E-06 57.7 2.3 97 374-480 53-224 (374)
483 2zig_A TTHA0409, putative modi 92.9 0.097 3.3E-06 51.8 5.1 92 180-275 22-141 (297)
484 3lec_A NADB-rossmann superfami 92.9 0.17 5.8E-06 49.4 6.7 109 144-264 33-147 (230)
485 3k6r_A Putative transferase PH 92.8 0.28 9.6E-06 48.9 8.3 109 143-261 136-252 (278)
486 3lec_A NADB-rossmann superfami 92.4 0.063 2.2E-06 52.4 2.9 139 365-521 15-164 (230)
487 2frx_A Hypothetical protein YE 92.0 0.027 9.2E-07 60.2 -0.1 102 375-480 119-245 (479)
488 2yxl_A PH0851 protein, 450AA l 91.8 0.1 3.5E-06 54.8 3.9 104 375-481 261-389 (450)
489 1uwv_A 23S rRNA (uracil-5-)-me 91.7 0.7 2.4E-05 48.2 10.2 130 375-520 288-431 (433)
490 3gnl_A Uncharacterized protein 91.7 0.23 7.8E-06 48.9 6.0 109 144-264 33-147 (244)
491 2qm3_A Predicted methyltransfe 91.6 0.09 3.1E-06 53.7 3.2 114 375-500 174-303 (373)
492 3lcv_B Sisomicin-gentamicin re 91.5 0.3 1E-05 49.2 6.8 86 143-232 143-234 (281)
493 2okc_A Type I restriction enzy 91.4 0.2 6.8E-06 52.4 5.7 71 164-235 215-308 (445)
494 2qfm_A Spermine synthase; sper 91.2 0.074 2.5E-06 55.4 2.1 91 143-235 199-315 (364)
495 1zq9_A Probable dimethyladenos 91.1 0.08 2.7E-06 52.2 2.1 22 374-395 29-50 (285)
496 3lcv_B Sisomicin-gentamicin re 90.7 0.18 6.3E-06 50.8 4.4 139 361-520 123-281 (281)
497 3uwp_A Histone-lysine N-methyl 90.6 0.036 1.2E-06 59.0 -0.9 22 460-481 267-288 (438)
498 3gnl_A Uncharacterized protein 90.6 0.083 2.8E-06 52.0 1.7 118 365-502 15-145 (244)
499 3evf_A RNA-directed RNA polyme 90.1 0.23 8E-06 49.9 4.5 54 181-234 125-184 (277)
500 3kr9_A SAM-dependent methyltra 90.0 0.51 1.7E-05 45.7 6.7 108 144-264 27-141 (225)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.08 E-value=4.8e-11 Score=117.61 Aligned_cols=87 Identities=17% Similarity=0.184 Sum_probs=69.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDR 222 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~R 222 (527)
.|.++..|..++..+..+ |.+++|++.|+++ ..+.+.+++++.+||++++||+|+|+.++ ||.+... ++.|+.|
T Consensus 50 tG~~~~~l~~~~~~v~gv---D~s~~ml~~a~~~-~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~~~~~-~~~e~~r 123 (257)
T 4hg2_A 50 SGQASLGLAEFFERVHAV---DPGEAQIRQALRH-PRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWFDLDR-FWAELRR 123 (257)
T ss_dssp TTTTHHHHHTTCSEEEEE---ESCHHHHHTCCCC-TTEEEEECCTTCCCCCSSCEEEEEECSCC-TTCCHHH-HHHHHHH
T ss_pred CCHHHHHHHHhCCEEEEE---eCcHHhhhhhhhc-CCceeehhhhhhhcccCCcccEEEEeeeh-hHhhHHH-HHHHHHH
Confidence 445555666666544444 7889999988653 34677889999999999999999999998 7776655 9999999
Q ss_pred cccCCcEEEEecC
Q 009719 223 LLRPGGYLVISGP 235 (527)
Q Consensus 223 VLRPGG~lviS~p 235 (527)
||||||.|++...
T Consensus 124 vLkpgG~l~~~~~ 136 (257)
T 4hg2_A 124 VARPGAVFAAVTY 136 (257)
T ss_dssp HEEEEEEEEEEEE
T ss_pred HcCCCCEEEEEEC
Confidence 9999999998764
No 2
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.98 E-value=7.9e-10 Score=101.72 Aligned_cols=119 Identities=10% Similarity=0.022 Sum_probs=88.1
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCccccccc-ChHHHHHHHh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA-YNATYLIEVD 221 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d-~~~~aL~Ei~ 221 (527)
.|.++.+|..++..+..+ |.++.+++.|+++...+.+.++|...+|+++++||+|+|..+++|+.. +...+|.++.
T Consensus 52 ~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~ 128 (203)
T 3h2b_A 52 TGRWTGHLASLGHQIEGL---EPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALR 128 (203)
T ss_dssp TCHHHHHHHHTTCCEEEE---CCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHH
T ss_pred CCHHHHHHHhcCCeEEEE---eCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHH
Confidence 344555666666543333 788999999999876778888999999999999999999999999873 3345999999
Q ss_pred hcccCCcEEEEecCCCCCCC---------chhHHHHHHHHHHhcceEEeeee
Q 009719 222 RLLRPGGYLVISGPPVQWPK---------QDKEWADLQAVARALCYELIAVD 264 (527)
Q Consensus 222 RVLRPGG~lviS~pp~~~~~---------~~~~w~~i~~l~~~mcW~~~~~~ 264 (527)
|+|||||+++++.+...... ....-+.+.++.+...|+.+...
T Consensus 129 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 180 (203)
T 3h2b_A 129 MAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSH 180 (203)
T ss_dssp HTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred HHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEE
Confidence 99999999999875321100 01134567777777778776543
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.98 E-value=3.4e-10 Score=108.47 Aligned_cols=88 Identities=18% Similarity=0.250 Sum_probs=69.1
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
|.++..|..++. .+...|.++.|++.|+++ +.+ +.+.++|++.+||++++||+|+|..+++|+.+... +|.
T Consensus 49 G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~~~-~l~ 124 (260)
T 1vl5_A 49 GHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAHHFPNPAS-FVS 124 (260)
T ss_dssp CHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGGGCSCHHH-HHH
T ss_pred CHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhHhcCCHHH-HHH
Confidence 444445555554 344447888999988765 444 66788999999999999999999999999887665 999
Q ss_pred HHhhcccCCcEEEEecC
Q 009719 219 EVDRLLRPGGYLVISGP 235 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~p 235 (527)
|+.|+|||||+|+++.+
T Consensus 125 ~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 125 EAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp HHHHHEEEEEEEEEEEE
T ss_pred HHHHHcCCCCEEEEEEc
Confidence 99999999999999754
No 4
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.96 E-value=1.6e-09 Score=101.25 Aligned_cols=89 Identities=15% Similarity=0.065 Sum_probs=71.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCC-CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVD 221 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~ 221 (527)
.|.++..|..++.. +...|.++.+++.|+++.. .+.+.++|.+.+ +++++||+|+|..+++|+.+... +|+|+.
T Consensus 53 ~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~~~~-~l~~~~ 127 (250)
T 2p7i_A 53 KGDFTSRLQEHFND---ITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDDPVA-LLKRIN 127 (250)
T ss_dssp TSHHHHHHTTTCSC---EEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCSSHHH-HHHHHH
T ss_pred CCHHHHHHHHhCCc---EEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhcCHHH-HHHHHH
Confidence 34555566666543 3334788999999998754 466777888888 67899999999999999977655 999999
Q ss_pred -hcccCCcEEEEecCC
Q 009719 222 -RLLRPGGYLVISGPP 236 (527)
Q Consensus 222 -RVLRPGG~lviS~pp 236 (527)
|+|||||+++++.|.
T Consensus 128 ~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 128 DDWLAEGGRLFLVCPN 143 (250)
T ss_dssp HTTEEEEEEEEEEEEC
T ss_pred HHhcCCCCEEEEEcCC
Confidence 999999999999874
No 5
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.93 E-value=2e-09 Score=101.28 Aligned_cols=129 Identities=16% Similarity=0.122 Sum_probs=92.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC--CCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG--IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg--~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
.|.++..|..++..+..+ |.++.+++.|+++. ..+.+.++|...+|+++++||+|+|..+++|+.+... +|.++
T Consensus 64 ~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~ 139 (242)
T 3l8d_A 64 DGYGTYKLSRTGYKAVGV---DISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEPLR-ALNEI 139 (242)
T ss_dssp TSHHHHHHHHTTCEEEEE---ESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSCHHH-HHHHH
T ss_pred CCHHHHHHHHcCCeEEEE---ECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhccCHHH-HHHHH
Confidence 455555666776644444 78899999998873 3466788899999999999999999999999866555 99999
Q ss_pred hhcccCCcEEEEecCCCCCCCch---------------hHHHHHHHHHHhcceEEeeeecceEEEeCCCcccc
Q 009719 221 DRLLRPGGYLVISGPPVQWPKQD---------------KEWADLQAVARALCYELIAVDGNTVIWKKPVGESC 278 (527)
Q Consensus 221 ~RVLRPGG~lviS~pp~~~~~~~---------------~~w~~i~~l~~~mcW~~~~~~~~v~iwrKp~~~~c 278 (527)
.|+|||||+++++.+........ ..-..++++.+...++.+.. ..+|........
T Consensus 140 ~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~---~~~~~~~~~~~~ 209 (242)
T 3l8d_A 140 KRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG---IGVYKRGVNEKM 209 (242)
T ss_dssp HHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE---EEEECTTCCHHH
T ss_pred HHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe---ecccccCccHHH
Confidence 99999999999987421110000 11235677777777887754 345666555433
No 6
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.93 E-value=5.5e-10 Score=101.16 Aligned_cols=72 Identities=24% Similarity=0.259 Sum_probs=62.2
Q ss_pred CcChHHHHHHHHHcCC-CcEEeeccccCCCC---CCCcccEEEecCccccc-ccChHHHHHHHhhcccCCcEEEEecC
Q 009719 163 RDSHKAQIQFALERGI-PAFVAMLGTRRLPF---PAFSFDIVHCSRCLIPF-TAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 163 ~D~seaqvq~A~eRg~-pa~~~v~dae~LPF---pD~SFDlV~cs~~l~hw-~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.|.++.|++.|+++.. ...+.++|++.+|+ ++++||+|+|+.+++|+ .+... +|+|+.|+|||||+|++..|
T Consensus 26 vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~-~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 26 VEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAE-ILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp HHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHH-HHHHHHHHEEEEEEEEEEEE
T ss_pred eeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHH-HHHHHHHHCCCCEEEEEEcc
Confidence 5889999999998742 36777889999998 89999999999999887 55544 99999999999999999765
No 7
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.87 E-value=2.3e-09 Score=99.12 Aligned_cols=75 Identities=29% Similarity=0.336 Sum_probs=64.8
Q ss_pred ccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 161 APRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 161 Ap~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
...|.++.+++.|+++.....+.+++.+.+|+++++||+|+|..+++|+.+... +|.|+.|+|||||+++++.++
T Consensus 60 ~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 60 VGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVER-VLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp EEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCHHH-HHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCHHH-HHHHHHHHcCCCCEEEEEecC
Confidence 334778899999998864567778899999999999999999999988876555 999999999999999999874
No 8
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.86 E-value=2.6e-09 Score=101.38 Aligned_cols=87 Identities=18% Similarity=0.208 Sum_probs=69.4
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC----CCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
.|.++..|..++..+ ...|.++.|++.|+++. ..+.+.++|.+.+||++++||+|+|..+++|+.+... +|.
T Consensus 50 ~G~~~~~l~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~ 125 (263)
T 2yqz_A 50 TGRIALPLIARGYRY---IALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHLVPDWPK-VLA 125 (263)
T ss_dssp TSTTHHHHHTTTCEE---EEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGGCTTHHH-HHH
T ss_pred CCHHHHHHHHCCCEE---EEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhhcCCHHH-HHH
Confidence 344555566666543 33478899999998872 3466788899999999999999999999977765554 999
Q ss_pred HHhhcccCCcEEEEe
Q 009719 219 EVDRLLRPGGYLVIS 233 (527)
Q Consensus 219 Ei~RVLRPGG~lviS 233 (527)
|+.|+|||||+++++
T Consensus 126 ~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 126 EAIRVLKPGGALLEG 140 (263)
T ss_dssp HHHHHEEEEEEEEEE
T ss_pred HHHHHCCCCcEEEEE
Confidence 999999999999997
No 9
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.84 E-value=1.4e-09 Score=106.15 Aligned_cols=88 Identities=16% Similarity=0.208 Sum_probs=69.0
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
|.++..|..+ +.. +...|.++.|++.|+++ |+ .+.+.++|...+||++++||+|+|..+++|+.+... +
T Consensus 94 G~~~~~l~~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~ 169 (297)
T 2o57_A 94 GGAARFLVRKFGVS---IDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLK-V 169 (297)
T ss_dssp SHHHHHHHHHHCCE---EEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHH-H
T ss_pred CHHHHHHHHHhCCE---EEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHH-H
Confidence 3344444444 443 33347788899888764 44 367788899999999999999999999999987554 9
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.|+.|+|||||+|+++.+
T Consensus 170 l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 170 FQECARVLKPRGVMAITDP 188 (297)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEEEe
Confidence 9999999999999999876
No 10
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.84 E-value=1.6e-09 Score=102.90 Aligned_cols=89 Identities=16% Similarity=0.162 Sum_probs=70.2
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHcC---CCcEEeeccccCCCCCCCcccEEEecCccccc--ccChHHH
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERG---IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPF--TAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg---~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw--~d~~~~a 216 (527)
.|.++.+|..+ +.. +...|.++.+++.|+++. ..+.+.++|...+|+++++||+|+|..+++|+ .+.. .+
T Consensus 66 ~G~~~~~l~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~-~~ 141 (266)
T 3ujc_A 66 LGGGCMYINEKYGAH---THGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILALSLENKN-KL 141 (266)
T ss_dssp TSHHHHHHHHHHCCE---EEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGSCHHHHH-HH
T ss_pred CCHHHHHHHHHcCCE---EEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHhcChHHHH-HH
Confidence 34444455554 443 333377899999999885 34667888999999999999999999999998 4444 49
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.|+.|+|||||+++++.+
T Consensus 142 l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 142 FQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEEEEe
Confidence 9999999999999999875
No 11
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.84 E-value=2.3e-09 Score=102.11 Aligned_cols=88 Identities=22% Similarity=0.273 Sum_probs=69.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
|.++..|..++.. +...|.++.+++.|+++ +.+ ..+.++|.+.+||++++||+|+|..+++|+.+... +|.
T Consensus 33 G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~ 108 (239)
T 1xxl_A 33 GHTALAFSPYVQE---CIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAHHFSDVRK-AVR 108 (239)
T ss_dssp SHHHHHHGGGSSE---EEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGGGCSCHHH-HHH
T ss_pred CHHHHHHHHhCCE---EEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCchhhccCHHH-HHH
Confidence 4444455555543 33447788888888754 444 56778899999999999999999999999986655 999
Q ss_pred HHhhcccCCcEEEEecC
Q 009719 219 EVDRLLRPGGYLVISGP 235 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~p 235 (527)
|+.|+|||||+++++.+
T Consensus 109 ~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 109 EVARVLKQDGRFLLVDH 125 (239)
T ss_dssp HHHHHEEEEEEEEEEEE
T ss_pred HHHHHcCCCcEEEEEEc
Confidence 99999999999999765
No 12
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.83 E-value=2.5e-09 Score=101.89 Aligned_cols=90 Identities=10% Similarity=0.018 Sum_probs=72.4
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC--CCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG--IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg--~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
.|.++.+|..++.. .+...|.++.+++.|+++. ..+.+.++|.+.+|+++++||+|+|..+++|+.+... +|.++
T Consensus 55 ~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~ 131 (253)
T 3g5l_A 55 FGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIASFDD-ICKKV 131 (253)
T ss_dssp TCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHH-HHHHH
T ss_pred CCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhhhHHH-HHHHH
Confidence 35555566666652 3344478899999999875 3467788899999999999999999999988865554 99999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.|+|||||+|+++.+
T Consensus 132 ~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 132 YINLKSSGSFIFSVE 146 (253)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHcCCCcEEEEEeC
Confidence 999999999999865
No 13
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.83 E-value=1.1e-09 Score=102.73 Aligned_cols=86 Identities=7% Similarity=-0.062 Sum_probs=65.8
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcC-----------------CCcEEeeccccCCCCCC-CcccEEEecCc
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERG-----------------IPAFVAMLGTRRLPFPA-FSFDIVHCSRC 205 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg-----------------~pa~~~v~dae~LPFpD-~SFDlV~cs~~ 205 (527)
|.++.+|.++|..+..+ |.|+.|++.|+++. ..+.+.++|...+|+++ ++||+|+|..+
T Consensus 34 G~~~~~la~~g~~V~gv---D~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~ 110 (203)
T 1pjz_A 34 SQDMSWLSGQGYHVVGA---ELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHCAAFYDRAA 110 (203)
T ss_dssp SHHHHHHHHHCCEEEEE---EECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHSEEEEEEESC
T ss_pred cHhHHHHHHCCCeEEEE---eCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCCEEEEEECcc
Confidence 44445566666543333 88899999998762 24678889999999987 89999999988
Q ss_pred ccccccCh-HHHHHHHhhcccCCcEEEE
Q 009719 206 LIPFTAYN-ATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 206 l~hw~d~~-~~aL~Ei~RVLRPGG~lvi 232 (527)
++|++... ..++.|+.|+|||||++++
T Consensus 111 l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 111 MIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp GGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred hhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 88876543 3489999999999998444
No 14
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.83 E-value=2.2e-09 Score=98.53 Aligned_cols=89 Identities=16% Similarity=0.225 Sum_probs=69.3
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
|.++..|..+ ....+...|.++.+++.|+++ ++ .+.+.++|...+||++++||+|+|..+++|+.+... +|
T Consensus 55 G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~-~l 131 (219)
T 3dlc_A 55 GALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVAT-AF 131 (219)
T ss_dssp SHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGCSCHHH-HH
T ss_pred CHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhccCHHH-HH
Confidence 4444455554 122444457888999988876 43 366788899999999999999999999999865555 99
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
.|+.|+|||||+++++.+
T Consensus 132 ~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 132 REIYRILKSGGKTYIGGG 149 (219)
T ss_dssp HHHHHHEEEEEEEEEEEC
T ss_pred HHHHHhCCCCCEEEEEec
Confidence 999999999999999864
No 15
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.82 E-value=1e-08 Score=95.06 Aligned_cols=100 Identities=16% Similarity=0.205 Sum_probs=74.2
Q ss_pred CcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCCC
Q 009719 163 RDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPPV 237 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~ 237 (527)
.|.++.+++.|+++ +++ +.+..+|...+|+++++||+|+|+.+++|+.+... +|.|+.|+|||||+++++....
T Consensus 68 vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~~~~LkpgG~l~i~~~~~ 146 (219)
T 3dh0_A 68 IDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTFHELSEPLK-FLEELKRVAKPFAYLAIIDWKK 146 (219)
T ss_dssp EESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCGGGCSSHHH-HHHHHHHHEEEEEEEEEEEECS
T ss_pred EECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhhhhcCCHHH-HHHHHHHHhCCCeEEEEEEecc
Confidence 37778888888765 443 66788899999999999999999999999876555 9999999999999999976421
Q ss_pred CC--CC----chhHHHHHHHHHHhcceEEeee
Q 009719 238 QW--PK----QDKEWADLQAVARALCYELIAV 263 (527)
Q Consensus 238 ~~--~~----~~~~w~~i~~l~~~mcW~~~~~ 263 (527)
.. .. .....+.++++.+...|+.+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 147 EERDKGPPPEEVYSEWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp SCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE
T ss_pred cccccCCchhcccCHHHHHHHHHHCCCEEEEE
Confidence 11 00 1112455667777777776543
No 16
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.80 E-value=1.9e-09 Score=102.29 Aligned_cols=88 Identities=18% Similarity=0.157 Sum_probs=69.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCC--CCCCCcccEEEecCcccccccCh-HHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRL--PFPAFSFDIVHCSRCLIPFTAYN-ATYLIE 219 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~L--PFpD~SFDlV~cs~~l~hw~d~~-~~aL~E 219 (527)
.|.++.+|..++..+.. .|.++.|++.|+++ ..+..+|...+ ||++++||+|+|..+++|+.+.. ..+|.|
T Consensus 52 ~G~~~~~l~~~~~~v~g---vD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~ 125 (240)
T 3dli_A 52 RGEFLELCKEEGIESIG---VDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPERLFELLSL 125 (240)
T ss_dssp TTHHHHHHHHHTCCEEE---ECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHH
T ss_pred CCHHHHHHHhCCCcEEE---EECCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHHHHHHHHH
Confidence 34555555666654433 38889999999887 55666777665 99999999999999999998542 349999
Q ss_pred HhhcccCCcEEEEecCC
Q 009719 220 VDRLLRPGGYLVISGPP 236 (527)
Q Consensus 220 i~RVLRPGG~lviS~pp 236 (527)
+.|+|||||+++++.+.
T Consensus 126 ~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 126 CYSKMKYSSYIVIESPN 142 (240)
T ss_dssp HHHHBCTTCCEEEEEEC
T ss_pred HHHHcCCCcEEEEEeCC
Confidence 99999999999999874
No 17
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.80 E-value=3.8e-09 Score=100.35 Aligned_cols=71 Identities=17% Similarity=0.194 Sum_probs=60.8
Q ss_pred CcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 163 RDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.|.++.+++.|+++ |+. +.+.++|++.+|+ +++||+|+|..+++|+.+... +|.|+.|+|||||+++++.+
T Consensus 65 vD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~-~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 65 IDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGATWIAGGFAG-AEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESCGGGTSSSHH-HHHHHTTSEEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCChHhcCCHHH-HHHHHHHHcCCCeEEEEecC
Confidence 37788888888754 543 6778899999999 899999999999988887665 99999999999999999875
No 18
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.79 E-value=1.4e-08 Score=94.27 Aligned_cols=89 Identities=13% Similarity=0.132 Sum_probs=71.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCC-CcEEeeccccCCCCCCCcccEEEecCcccccccChH-HHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei 220 (527)
.|.++..|..++..+. ..|.++.+++.|+++.. .+.+..+|...+|++ ++||+|+|..+++|+.+... .+|.|+
T Consensus 56 ~G~~~~~l~~~~~~v~---~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~ 131 (220)
T 3hnr_A 56 TGNLTNKLLLAGRTVY---GIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKY 131 (220)
T ss_dssp TSHHHHHHHHTTCEEE---EECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCeEE---EEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcchhcCChHHHHHHHHHH
Confidence 3455556666665444 44888999999998754 466778899999999 99999999999988876542 389999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.|+|||||+++++.+
T Consensus 132 ~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 132 SQLLNKGGKIVFADT 146 (220)
T ss_dssp HHHSCTTCEEEEEEE
T ss_pred HHhcCCCCEEEEEec
Confidence 999999999999975
No 19
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.79 E-value=4.3e-09 Score=101.41 Aligned_cols=90 Identities=20% Similarity=0.316 Sum_probs=72.1
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDR 222 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~R 222 (527)
.|.++..|..++.. +...|.++.+++.|+++... .+.++|.+.+|+++++||+|+|..++.|+..+...+|.|+.|
T Consensus 65 ~G~~~~~l~~~~~~---v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~ 140 (260)
T 2avn_A 65 TGKWSLFLQERGFE---VVLVDPSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRR 140 (260)
T ss_dssp TCHHHHHHHTTTCE---EEEEESCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHHHHHHHHH
T ss_pred cCHHHHHHHHcCCe---EEEEeCCHHHHHHHHhhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhccccHHHHHHHHHH
Confidence 34455566666654 33448889999999988653 377789999999999999999998888986556669999999
Q ss_pred cccCCcEEEEecCC
Q 009719 223 LLRPGGYLVISGPP 236 (527)
Q Consensus 223 VLRPGG~lviS~pp 236 (527)
+|||||+++++.+.
T Consensus 141 ~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 141 VLVPDGLLIATVDN 154 (260)
T ss_dssp HEEEEEEEEEEEEB
T ss_pred HcCCCeEEEEEeCC
Confidence 99999999998873
No 20
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.78 E-value=4.5e-09 Score=100.97 Aligned_cols=75 Identities=28% Similarity=0.375 Sum_probs=63.2
Q ss_pred eccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEe
Q 009719 160 FAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 160 iAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
+...|.++.+++.|+++ +++ ..+..+|...+||++++||+|+|..+++|+.+... +|.|+.|+|||||+++++
T Consensus 87 v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~~~~L~pgG~l~i~ 165 (273)
T 3bus_A 87 VTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGR-ALREMARVLRPGGTVAIA 165 (273)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHH-HHHHHHTTEEEEEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHH-HHHHHHHHcCCCeEEEEE
Confidence 33347788899888765 443 66778899999999999999999999999877655 999999999999999998
Q ss_pred cC
Q 009719 234 GP 235 (527)
Q Consensus 234 ~p 235 (527)
.+
T Consensus 166 ~~ 167 (273)
T 3bus_A 166 DF 167 (273)
T ss_dssp EE
T ss_pred Ee
Confidence 75
No 21
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.77 E-value=4.4e-09 Score=102.14 Aligned_cols=87 Identities=15% Similarity=0.122 Sum_probs=69.3
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhc
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRL 223 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RV 223 (527)
|.++..|...+..+..+ |.++.|++.|+++...+.+.++|++.+|+ +++||+|+|..+++|+.+... +|.|+.|+
T Consensus 69 G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~d~~~-~l~~~~~~ 143 (279)
T 3ccf_A 69 GQLTEKIAQSGAEVLGT---DNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAMLHWVKEPEA-AIASIHQA 143 (279)
T ss_dssp SHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESCGGGCSCHHH-HHHHHHHH
T ss_pred CHHHHHHHhCCCeEEEE---ECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcchhhhCcCHHH-HHHHHHHh
Confidence 44444555555543333 77899999999886556778889999998 689999999999988776555 99999999
Q ss_pred ccCCcEEEEecC
Q 009719 224 LRPGGYLVISGP 235 (527)
Q Consensus 224 LRPGG~lviS~p 235 (527)
|||||+++++.+
T Consensus 144 LkpgG~l~~~~~ 155 (279)
T 3ccf_A 144 LKSGGRFVAEFG 155 (279)
T ss_dssp EEEEEEEEEEEE
T ss_pred cCCCcEEEEEec
Confidence 999999999876
No 22
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.77 E-value=4.2e-09 Score=99.99 Aligned_cols=70 Identities=20% Similarity=0.164 Sum_probs=61.5
Q ss_pred cChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|++.|+++.....+.++|.+.+| ++++||+|+|+.+++|+.+... +|.|+.|+|||||+++++.+
T Consensus 64 D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~-~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 64 DSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWVPDHLA-VLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp ESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGSTTHHH-HHHHHGGGEEEEEEEEEEEE
T ss_pred ECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhCCCHHH-HHHHHHHhcCCCeEEEEEeC
Confidence 7788999999988656778888999999 8999999999999977765554 99999999999999999986
No 23
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.76 E-value=6.2e-09 Score=97.68 Aligned_cols=90 Identities=20% Similarity=0.139 Sum_probs=71.1
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
.|.++..|..++.. .+...|.++.+++.|+++.. .+.+..+|...+|+++++||+|+|+.+++|+.+... +|.++
T Consensus 54 ~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~ 130 (243)
T 3bkw_A 54 FGWFCRWAHEHGAS--YVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVEDVAR-LFRTV 130 (243)
T ss_dssp TCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHH-HHHHH
T ss_pred CCHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccccchHHH-HHHHH
Confidence 34455566666651 23333778999999998754 356777899999999999999999999988876554 99999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.|+|||||+++++.+
T Consensus 131 ~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 131 HQALSPGGHFVFSTE 145 (243)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHhcCcCcEEEEEeC
Confidence 999999999999876
No 24
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.74 E-value=3.4e-09 Score=104.16 Aligned_cols=74 Identities=15% Similarity=0.028 Sum_probs=58.6
Q ss_pred ccCcChHHHHHHHHHc-----CCCc---EEeeccccCCC------CCCCcccEEEecCcccccccChHHHHHHHhhcccC
Q 009719 161 APRDSHKAQIQFALER-----GIPA---FVAMLGTRRLP------FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRP 226 (527)
Q Consensus 161 Ap~D~seaqvq~A~eR-----g~pa---~~~v~dae~LP------FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRP 226 (527)
...|.++.|++.|+++ +++. .+..++++.++ |++++||+|+|+.+++|+.+... +|+|+.|+|||
T Consensus 86 ~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~-~l~~~~r~Lkp 164 (292)
T 2aot_A 86 EVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPA-TLKFFHSLLGT 164 (292)
T ss_dssp EEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHH-HHHHHHHTEEE
T ss_pred EEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCHHH-HHHHHHHHcCC
Confidence 4448899999999876 3332 23445565554 78999999999999988877665 99999999999
Q ss_pred CcEEEEecC
Q 009719 227 GGYLVISGP 235 (527)
Q Consensus 227 GG~lviS~p 235 (527)
||+|++..+
T Consensus 165 gG~l~i~~~ 173 (292)
T 2aot_A 165 NAKMLIIVV 173 (292)
T ss_dssp EEEEEEEEE
T ss_pred CcEEEEEEe
Confidence 999999864
No 25
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.73 E-value=4.9e-09 Score=101.25 Aligned_cols=87 Identities=15% Similarity=0.161 Sum_probs=70.1
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDR 222 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~R 222 (527)
.|.++..|.+.+..+..+ |.++.|++.|+++. .+.+.++|++.+||++++||+|+|..+++|+.+... +|+|+.|
T Consensus 45 ~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~~~ 119 (261)
T 3ege_A 45 TGGYSVALANQGLFVYAV---EPSIVMRQQAVVHP-QVEWFTGYAENLALPDKSVDGVISILAIHHFSHLEK-SFQEMQR 119 (261)
T ss_dssp TSHHHHHHHTTTCEEEEE---CSCHHHHHSSCCCT-TEEEECCCTTSCCSCTTCBSEEEEESCGGGCSSHHH-HHHHHHH
T ss_pred ccHHHHHHHhCCCEEEEE---eCCHHHHHHHHhcc-CCEEEECchhhCCCCCCCEeEEEEcchHhhccCHHH-HHHHHHH
Confidence 455555666666544444 88889998887665 677888999999999999999999999999966655 9999999
Q ss_pred cccCCcEEEEecC
Q 009719 223 LLRPGGYLVISGP 235 (527)
Q Consensus 223 VLRPGG~lviS~p 235 (527)
+|| ||++++..+
T Consensus 120 ~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 120 IIR-DGTIVLLTF 131 (261)
T ss_dssp HBC-SSCEEEEEE
T ss_pred HhC-CcEEEEEEc
Confidence 999 998888664
No 26
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.73 E-value=1.8e-08 Score=93.53 Aligned_cols=94 Identities=21% Similarity=0.265 Sum_probs=72.9
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC----C------CcEEeeccccCCCCCCCcccEEEecCcccccccC
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----I------PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~------pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
.|.++..|..++..+. ..|.++.+++.|+++. + ...+..++...+|+++++||+|+|+.+++|+.+.
T Consensus 41 ~G~~~~~l~~~~~~v~---~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~ 117 (235)
T 3sm3_A 41 SGKISLELASKGYSVT---GIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDP 117 (235)
T ss_dssp TSHHHHHHHHTTCEEE---EEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCCH
T ss_pred CCHHHHHHHhCCCeEE---EEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcchhhcCCCH
Confidence 4555556666665433 3488899999998753 2 2456778999999999999999999999998765
Q ss_pred hH--HHHHHHhhcccCCcEEEEecCCCCC
Q 009719 213 NA--TYLIEVDRLLRPGGYLVISGPPVQW 239 (527)
Q Consensus 213 ~~--~aL~Ei~RVLRPGG~lviS~pp~~~ 239 (527)
.. .+|.++.|+|||||+++++.+...+
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (235)
T 3sm3_A 118 KERSRIIKEVFRVLKPGAYLYLVEFGQNW 146 (235)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEBCCT
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEECCcch
Confidence 51 4999999999999999998764443
No 27
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.72 E-value=6.2e-09 Score=98.94 Aligned_cols=88 Identities=14% Similarity=0.141 Sum_probs=67.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
|.++..|..+.-. .+...|.++.+++.|+++ |++ +.+..+|.+.+||++++||+|+|..+++|+ +.. .+|
T Consensus 58 G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~-~~l 133 (257)
T 3f4k_A 58 GGQTLFLADYVKG--QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIYNI-GFE-RGM 133 (257)
T ss_dssp SHHHHHHHHHCCS--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSCCC-CHH-HHH
T ss_pred CHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHhhc-CHH-HHH
Confidence 4444444444321 333447788888888765 444 667888999999999999999999999887 444 499
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
.++.|+|||||+++++.+
T Consensus 134 ~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 134 NEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp HHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHcCCCcEEEEEEe
Confidence 999999999999999875
No 28
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.71 E-value=6.3e-09 Score=101.18 Aligned_cols=89 Identities=16% Similarity=0.095 Sum_probs=71.1
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCC-CCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLP-FPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LP-FpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
.|.++..|..++..+..+ |.++.+++.|+++ ++ .+.+.++|...+| +++++||+|+|..+++|+.+...
T Consensus 79 ~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~- 154 (285)
T 4htf_A 79 EGQTAIKMAERGHQVILC---DLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRS- 154 (285)
T ss_dssp TCHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGGCSCHHH-
T ss_pred chHHHHHHHHCCCEEEEE---ECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhhcccCHHH-
Confidence 344555566666544444 7788999999875 44 2567788999998 99999999999999999876655
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|.|+.|+|||||+++++.+
T Consensus 155 ~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 155 VLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp HHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEEe
Confidence 99999999999999999876
No 29
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.71 E-value=3.1e-09 Score=100.67 Aligned_cols=90 Identities=12% Similarity=0.173 Sum_probs=69.1
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCC---CcEEeeccccCCCCCCCcccEEEecCcccccccC-hHHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-NATYLIE 219 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-~~~aL~E 219 (527)
|.++..|+.++.. .+...|.++.+++.|+++.. .+.+..+|...+|+++++||+|+|..+++|+++. ...+|.+
T Consensus 105 G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~ 182 (254)
T 1xtp_A 105 GRITKNLLTKLYA--TTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKH 182 (254)
T ss_dssp THHHHHTHHHHCS--EEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHH
T ss_pred CHHHHHHHHhhcC--EEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHH
Confidence 4444455555421 23334778899999988753 3567778999999999999999999999998642 2359999
Q ss_pred HhhcccCCcEEEEecC
Q 009719 220 VDRLLRPGGYLVISGP 235 (527)
Q Consensus 220 i~RVLRPGG~lviS~p 235 (527)
+.|+|||||+|+++.+
T Consensus 183 ~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 183 CQQALTPNGYIFFKEN 198 (254)
T ss_dssp HHHHEEEEEEEEEEEE
T ss_pred HHHhcCCCeEEEEEec
Confidence 9999999999999875
No 30
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.70 E-value=5.3e-09 Score=101.70 Aligned_cols=89 Identities=19% Similarity=0.240 Sum_probs=70.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC---------CCcEEeeccccCCC---CCCCcccEEEec-Cccccc
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG---------IPAFVAMLGTRRLP---FPAFSFDIVHCS-RCLIPF 209 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg---------~pa~~~v~dae~LP---FpD~SFDlV~cs-~~l~hw 209 (527)
.|.++..|.+++.. +...|.++.|++.|+++. ....+..++...+| |++++||+|+|. .+++|+
T Consensus 68 ~G~~~~~l~~~~~~---v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~ 144 (293)
T 3thr_A 68 TGVDSIMLVEEGFS---VTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHL 144 (293)
T ss_dssp TSHHHHHHHHTTCE---EEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGS
T ss_pred CCHHHHHHHHCCCe---EEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhc
Confidence 45556667777764 444488899999997642 12456778888888 999999999998 899998
Q ss_pred cc-------ChHHHHHHHhhcccCCcEEEEecC
Q 009719 210 TA-------YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 210 ~d-------~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+ ... +|.++.|+|||||+|+++.+
T Consensus 145 ~~~~~~~~~~~~-~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 145 PDSKGDQSEHRL-ALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp CCSSSSSHHHHH-HHHHHHHTEEEEEEEEEEEE
T ss_pred CccccCHHHHHH-HHHHHHHHcCCCeEEEEEeC
Confidence 87 444 99999999999999999987
No 31
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.70 E-value=1.4e-08 Score=90.81 Aligned_cols=86 Identities=14% Similarity=0.085 Sum_probs=68.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDR 222 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~R 222 (527)
.|.++..|..++. .+...|.++.+++.|+++...+.+..+| +|+++++||+|+|..+++|+.+... +|.|+.|
T Consensus 28 ~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~~~~~-~l~~~~~ 100 (170)
T 3i9f_A 28 NGFYCKYLLEFAT---KLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFHDMDDKQH-VISEVKR 100 (170)
T ss_dssp TCTTHHHHHTTEE---EEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTTCSCHHH-HHHHHHH
T ss_pred CCHHHHHHHhhcC---eEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchhcccCHHH-HHHHHHH
Confidence 3444555555553 4555588899999999885455666666 8999999999999999999876554 9999999
Q ss_pred cccCCcEEEEecC
Q 009719 223 LLRPGGYLVISGP 235 (527)
Q Consensus 223 VLRPGG~lviS~p 235 (527)
+|||||+++++..
T Consensus 101 ~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 101 ILKDDGRVIIIDW 113 (170)
T ss_dssp HEEEEEEEEEEEE
T ss_pred hcCCCCEEEEEEc
Confidence 9999999999864
No 32
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.70 E-value=7.5e-09 Score=95.31 Aligned_cols=89 Identities=13% Similarity=0.107 Sum_probs=70.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCC-CcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei 220 (527)
.|.++..|..++..+..+ |.++.+++.|++.+. .+.+..+|...+ +++++||+|+|+.+++|+.+.. ..+|.++
T Consensus 57 ~G~~~~~l~~~~~~v~~~---D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~ 132 (218)
T 3ou2_A 57 TGYWTRHLSGLADRVTAL---DGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESV 132 (218)
T ss_dssp TSHHHHHHHHHSSEEEEE---ESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHH
T ss_pred CCHHHHHHHhcCCeEEEE---eCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHH
Confidence 344555566665543333 778999999998774 466778898888 8999999999999999987752 3599999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.|+|||||+++++.+
T Consensus 133 ~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 133 RSAVAPGGVVEFVDV 147 (218)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHcCCCeEEEEEeC
Confidence 999999999999875
No 33
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.69 E-value=1.6e-08 Score=99.10 Aligned_cols=87 Identities=13% Similarity=0.015 Sum_probs=67.9
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcC----------------------CCcEEeeccccCCCCCC-CcccEE
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----------------------IPAFVAMLGTRRLPFPA-FSFDIV 200 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----------------------~pa~~~v~dae~LPFpD-~SFDlV 200 (527)
|..+.+|.++|..+..+ |.|+.+++.|+++. ..+.+.++|...||+++ ++||+|
T Consensus 80 G~~~~~La~~G~~V~gv---D~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V 156 (252)
T 2gb4_A 80 AIEMKWFADRGHTVVGV---EISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRI 156 (252)
T ss_dssp CTHHHHHHHTTCEEEEE---CSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEE
T ss_pred cHHHHHHHHCCCeEEEE---ECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCcccCCCEEEE
Confidence 44445667777654444 88999999997653 23567889999999985 999999
Q ss_pred EecCcccccccCh-HHHHHHHhhcccCCcEEEEe
Q 009719 201 HCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 201 ~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS 233 (527)
++..+++|++... ..++.|+.|+|||||+|++.
T Consensus 157 ~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 157 WDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp EESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9998888886543 35999999999999999753
No 34
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.69 E-value=1.7e-08 Score=93.60 Aligned_cols=89 Identities=19% Similarity=0.203 Sum_probs=71.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCC---CcEEeeccccCCCCCCCcccEEEecCcccccccCh--HHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN--ATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~--~~aL 217 (527)
.|.++.+|..++. .+...|.++.+++.|+++.. .+.+.++|...++ ++++||+|+|+.+++|+.+.. ..+|
T Consensus 62 ~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~~l 137 (216)
T 3ofk_A 62 AGAFTEKLAPHCK---RLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLYYLEDMTQMRTAI 137 (216)
T ss_dssp TSHHHHHHGGGEE---EEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSSSHHHHHHHH
T ss_pred CCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHHhCCCHHHHHHHH
Confidence 4555556666654 44455888999999988742 3567888999998 789999999999999988653 2489
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
.++.|+|||||+|+++++
T Consensus 138 ~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 138 DNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp HHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHcCCCCEEEEEec
Confidence 999999999999999876
No 35
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.69 E-value=1.8e-08 Score=97.06 Aligned_cols=89 Identities=17% Similarity=0.192 Sum_probs=67.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
.|.++..|..++. ..+...|.++.+++.|+++ +++ +.+.++|.+.+|+++++||+|+|..+++|+ +.. .+
T Consensus 57 ~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~~~-~~ 132 (267)
T 3kkz_A 57 TGGQTMVLAGHVT--GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIYNI-GFE-RG 132 (267)
T ss_dssp TCHHHHHHHTTCS--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGGGT-CHH-HH
T ss_pred CCHHHHHHHhccC--CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCceec-CHH-HH
Confidence 3444444555522 1233337788888888765 443 677889999999999999999999999888 444 49
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|+|||||+++++.+
T Consensus 133 l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 133 LNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp HHHHGGGEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEEEEe
Confidence 9999999999999999876
No 36
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.69 E-value=8.3e-09 Score=95.62 Aligned_cols=115 Identities=19% Similarity=0.106 Sum_probs=80.2
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVD 221 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~ 221 (527)
.|.++..|..++..+.. .|.++.+++.|+++. ...+..++...+| ++++||+|+|+.+++|+.... ..+|.|+.
T Consensus 54 ~G~~~~~l~~~~~~v~~---vD~s~~~~~~a~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~ 128 (211)
T 3e23_A 54 AGYQAEAMLAAGFDVDA---TDGSPELAAEASRRL-GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIW 128 (211)
T ss_dssp TSHHHHHHHHTTCEEEE---EESCHHHHHHHHHHH-TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHcCCeEEE---ECCCHHHHHHHHHhc-CCceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHH
Confidence 45555566677664443 478899999998873 3345567888899 899999999999999987322 34999999
Q ss_pred hcccCCcEEEEecCCCCCCCc--------hhHHHHHHHHHHhcc-eEEee
Q 009719 222 RLLRPGGYLVISGPPVQWPKQ--------DKEWADLQAVARALC-YELIA 262 (527)
Q Consensus 222 RVLRPGG~lviS~pp~~~~~~--------~~~w~~i~~l~~~mc-W~~~~ 262 (527)
|+|||||+|+++.++...... ...-+.++++.+... |+.+.
T Consensus 129 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~ 178 (211)
T 3e23_A 129 RALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVA 178 (211)
T ss_dssp HHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEE
T ss_pred HhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEE
Confidence 999999999998764321100 113345666666655 65543
No 37
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.69 E-value=5.3e-08 Score=87.41 Aligned_cols=113 Identities=17% Similarity=0.099 Sum_probs=79.6
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEec-CcccccccC-hHHHHHHHh
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCS-RCLIPFTAY-NATYLIEVD 221 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs-~~l~hw~d~-~~~aL~Ei~ 221 (527)
|.++..|...+.. +...|.++.+++.|+++.....+..+|...+|+++++||+|+|+ .+++|+... ...+|.++.
T Consensus 58 G~~~~~l~~~~~~---v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~ 134 (195)
T 3cgg_A 58 GRIGGYLSKQGHD---VLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAEDGREPALANIH 134 (195)
T ss_dssp THHHHHHHHTTCE---EEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCc---EEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcChHHHHHHHHHHH
Confidence 4445556666653 33447788999999988656777888998999999999999998 566665433 235999999
Q ss_pred hcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeee
Q 009719 222 RLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAV 263 (527)
Q Consensus 222 RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~ 263 (527)
|+|||||+++++.+.... ...+.+.++.+...++....
T Consensus 135 ~~l~~~G~l~~~~~~~~~----~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 135 RALGADGRAVIGFGAGRG----WVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp HHEEEEEEEEEEEETTSS----CCHHHHHHHHHHHTEEEEEE
T ss_pred HHhCCCCEEEEEeCCCCC----cCHHHHHHHHHHcCCEEeee
Confidence 999999999998764221 12334555555556665443
No 38
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.68 E-value=1.5e-08 Score=93.05 Aligned_cols=74 Identities=20% Similarity=0.219 Sum_probs=60.7
Q ss_pred cCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccc-cChHHHHHHHhhcccCCcEEEEecC
Q 009719 162 PRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFT-AYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~-d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
..|.++.+++.|+++ +....+.++|+..+|+++++||+|+|..+++|+. ++...+|.|+.|+|||||+++++..
T Consensus 51 ~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 51 GIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp EEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 337788888888764 4456677889999999999999999999998884 2233599999999999999999775
No 39
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.67 E-value=8.4e-09 Score=97.91 Aligned_cols=91 Identities=16% Similarity=0.118 Sum_probs=69.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCC-----cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIP-----AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~p-----a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~a 216 (527)
.|.++..|+.++. ..+...|.++.+++.|+++... ..+..+|...+++++++||+|+|..+++|+.+.. ..+
T Consensus 90 ~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~ 167 (241)
T 2ex4_A 90 IGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEF 167 (241)
T ss_dssp TTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHH
T ss_pred CCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHH
Confidence 3444445565542 1333447788999999877432 4567788999999999999999999999987644 249
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.|+.|+|||||+|+++.+
T Consensus 168 l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 168 LRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhcCCCeEEEEEEc
Confidence 9999999999999999875
No 40
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.66 E-value=1.5e-08 Score=97.66 Aligned_cols=88 Identities=20% Similarity=0.246 Sum_probs=68.6
Q ss_pred hccccccccC--CeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 144 ASFGGSMLSE--NILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 144 gsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
|.++..|..+ +..++.+ |.++.+++.|+++ +++ +.+..+|...+|+++++||+|+|+.+++|+.+... +
T Consensus 49 G~~~~~l~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~ 124 (276)
T 3mgg_A 49 GAQTVILAKNNPDAEITSI---DISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEE-A 124 (276)
T ss_dssp SHHHHHHHHHCTTSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGGGCSCHHH-H
T ss_pred CHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhhhcCCHHH-H
Confidence 4444445444 3333333 7778888888765 443 56778899999999999999999999999887665 9
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|+|||||++++..+
T Consensus 125 l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 125 LKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCcEEEEEEc
Confidence 9999999999999999765
No 41
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.66 E-value=1.5e-08 Score=100.46 Aligned_cols=88 Identities=15% Similarity=0.039 Sum_probs=69.0
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
.|.++..|..+ +..+..+ |.++.+++.|+++ |+. +.+..+|.+.+||++++||+|+|..+++|+ + ...
T Consensus 128 ~G~~~~~la~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~-~-~~~ 202 (312)
T 3vc1_A 128 RGGSMVMAHRRFGSRVEGV---TLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMYV-D-LHD 202 (312)
T ss_dssp TSHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGGS-C-HHH
T ss_pred CCHHHHHHHHHcCCEEEEE---eCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchhhC-C-HHH
Confidence 34455555555 5433333 7788899888764 544 678889999999999999999999999888 4 445
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|.|+.|+|||||++++.++
T Consensus 203 ~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 203 LFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEEc
Confidence 99999999999999999875
No 42
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.66 E-value=1.9e-08 Score=99.05 Aligned_cols=72 Identities=22% Similarity=0.197 Sum_probs=59.2
Q ss_pred cCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEec
Q 009719 162 PRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
..|.+++|++.|+++ +. ++.+.++|+..+|++ .||+|+|..+++|+++.+ ..+|+|+.|+|||||+|+++.
T Consensus 101 gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 101 AIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 338899999999876 32 456788999999986 499999999998876544 248999999999999999987
Q ss_pred C
Q 009719 235 P 235 (527)
Q Consensus 235 p 235 (527)
+
T Consensus 179 ~ 179 (261)
T 4gek_A 179 K 179 (261)
T ss_dssp E
T ss_pred c
Confidence 5
No 43
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.65 E-value=2.1e-08 Score=92.63 Aligned_cols=88 Identities=16% Similarity=0.194 Sum_probs=69.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccC--CCCCCCcccEEEecCcccccccChHHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRR--LPFPAFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~--LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
.|.++.+|..++. .+...|.++.+++.|+++.. .+..+|... +|+++++||+|+|+.+++|+.+... +|.++
T Consensus 43 ~G~~~~~l~~~~~---~~~~~D~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~ 116 (230)
T 3cc8_A 43 SGALGAAIKENGT---RVSGIEAFPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDPWA-VIEKV 116 (230)
T ss_dssp TSHHHHHHHTTTC---EEEEEESSHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCHHH-HHHHT
T ss_pred CCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccCEEEECChhhhcCCHHH-HHHHH
Confidence 3445555666654 34444888899999987653 455667655 8899999999999999999877655 99999
Q ss_pred hhcccCCcEEEEecCC
Q 009719 221 DRLLRPGGYLVISGPP 236 (527)
Q Consensus 221 ~RVLRPGG~lviS~pp 236 (527)
.|+|||||+++++.|.
T Consensus 117 ~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 117 KPYIKQNGVILASIPN 132 (230)
T ss_dssp GGGEEEEEEEEEEEEC
T ss_pred HHHcCCCCEEEEEeCC
Confidence 9999999999999874
No 44
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.65 E-value=1.8e-08 Score=94.58 Aligned_cols=89 Identities=9% Similarity=0.081 Sum_probs=69.0
Q ss_pred hhccccccccC--CeeEEeeccCcChHHHHHHHHHcCC---CcEEeeccccCCCCCCCcccEEEecCcccccccChH-HH
Q 009719 143 VASFGGSMLSE--NILTLSFAPRDSHKAQIQFALERGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TY 216 (527)
Q Consensus 143 vgsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eRg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~a 216 (527)
.|.++..|..+ +..+.. .|.++.+++.|+++.. .+.+..+|...+|++ ++||+|+|..+++|+.+... .+
T Consensus 55 ~G~~~~~l~~~~~~~~v~~---vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~ 130 (234)
T 3dtn_A 55 TGLLSAFLMEKYPEATFTL---VDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSIHHLEDEDKKEL 130 (234)
T ss_dssp TSHHHHHHHHHCTTCEEEE---EESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCGGGSCHHHHHHH
T ss_pred CCHHHHHHHHhCCCCeEEE---EECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCccccCCHHHHHHH
Confidence 34444455554 443333 3778899999988732 466788899999998 99999999999999865542 49
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.|+.|+|||||+|+++.+
T Consensus 131 l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 131 YKRSYSILKESGIFINADL 149 (234)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEEEEe
Confidence 9999999999999999875
No 45
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.65 E-value=2.7e-08 Score=95.44 Aligned_cols=88 Identities=13% Similarity=0.075 Sum_probs=70.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecC-ccccccc--ChHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSR-CLIPFTA--YNATYLIE 219 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~-~l~hw~d--~~~~aL~E 219 (527)
.|.++..|..++..+ ...|.++.+++.|+++...+.+.++|...+|+ +++||+|+|.. +++|+.+ +...+|.+
T Consensus 61 ~G~~~~~l~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~ 136 (263)
T 3pfg_A 61 TGMHLRHLADSFGTV---EGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALER 136 (263)
T ss_dssp TSHHHHHHTTTSSEE---EEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHcCCeE---EEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHH
Confidence 455566667776543 33488899999999886667788899999999 79999999998 8888753 33358999
Q ss_pred HhhcccCCcEEEEec
Q 009719 220 VDRLLRPGGYLVISG 234 (527)
Q Consensus 220 i~RVLRPGG~lviS~ 234 (527)
+.|+|||||+|+++.
T Consensus 137 ~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 137 FAAHVLPDGVVVVEP 151 (263)
T ss_dssp HHHTEEEEEEEEECC
T ss_pred HHHhcCCCcEEEEEe
Confidence 999999999999975
No 46
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.65 E-value=2.7e-09 Score=110.00 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=72.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcE---EeeccccCCCCCCCcccEEEecCcccccccChHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAF---VAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIE 219 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~---~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~E 219 (527)
.|.+..+|.+++..+..+ |.++.|++.|++++++.. +...+++.+||++++||+|+|..+++|+++... +|+|
T Consensus 118 ~G~~~~~l~~~g~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~-~l~~ 193 (416)
T 4e2x_A 118 DGIMLRTIQEAGVRHLGF---EPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHIPYVQS-VLEG 193 (416)
T ss_dssp TTTTHHHHHHTTCEEEEE---CCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCTTHHH-HHHH
T ss_pred CCHHHHHHHHcCCcEEEE---CCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHhcCCHHH-HHHH
Confidence 455555566777644444 889999999999977643 334567889999999999999999999986655 9999
Q ss_pred HhhcccCCcEEEEecCC
Q 009719 220 VDRLLRPGGYLVISGPP 236 (527)
Q Consensus 220 i~RVLRPGG~lviS~pp 236 (527)
+.|+|||||+|+++.|.
T Consensus 194 ~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 194 VDALLAPDGVFVFEDPY 210 (416)
T ss_dssp HHHHEEEEEEEEEEEEC
T ss_pred HHHHcCCCeEEEEEeCC
Confidence 99999999999998763
No 47
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.64 E-value=3e-08 Score=102.03 Aligned_cols=72 Identities=28% Similarity=0.186 Sum_probs=61.6
Q ss_pred CcChHHHHHHHHHc---------C----CCcEEeeccccCC------CCCCCcccEEEecCcccccccChHHHHHHHhhc
Q 009719 163 RDSHKAQIQFALER---------G----IPAFVAMLGTRRL------PFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRL 223 (527)
Q Consensus 163 ~D~seaqvq~A~eR---------g----~pa~~~v~dae~L------PFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RV 223 (527)
.|.++.|++.|+++ | ..+.+.++|.+.+ ||++++||+|+|..+++|+.+... +|.|+.|+
T Consensus 114 vD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~-~l~~~~r~ 192 (383)
T 4fsd_A 114 VDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTNKLA-LFKEIHRV 192 (383)
T ss_dssp EECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCHHH-HHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCCHHH-HHHHHHHH
Confidence 37788999999876 4 3567788888887 999999999999999988876555 99999999
Q ss_pred ccCCcEEEEecC
Q 009719 224 LRPGGYLVISGP 235 (527)
Q Consensus 224 LRPGG~lviS~p 235 (527)
|||||+|+++.+
T Consensus 193 LkpgG~l~i~~~ 204 (383)
T 4fsd_A 193 LRDGGELYFSDV 204 (383)
T ss_dssp EEEEEEEEEEEE
T ss_pred cCCCCEEEEEEe
Confidence 999999999864
No 48
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.63 E-value=8.8e-08 Score=90.31 Aligned_cols=116 Identities=13% Similarity=0.071 Sum_probs=80.4
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCC------cEEeeccccCCCCCCCcccEEEecCcccccccC-hHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIP------AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-NAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~p------a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-~~~ 215 (527)
.|.++..|...+..+. ..|.++.+++.|+++... +.+.++|...++ ++++||+|+|..+++|++.. ...
T Consensus 77 ~G~~~~~l~~~~~~v~---gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~ 152 (235)
T 3lcc_A 77 GGHDVVAMASPERFVV---GLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAIEPEMRPA 152 (235)
T ss_dssp TCHHHHHHCBTTEEEE---EECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTSCGGGHHH
T ss_pred CCHHHHHHHhCCCeEE---EEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcCCHHHHHH
Confidence 4555555666665444 448899999999877422 567788988887 56799999999999888632 234
Q ss_pred HHHHHhhcccCCcEEEEecCCCCCC--C--chhHHHHHHHHHHhcceEEee
Q 009719 216 YLIEVDRLLRPGGYLVISGPPVQWP--K--QDKEWADLQAVARALCYELIA 262 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~pp~~~~--~--~~~~w~~i~~l~~~mcW~~~~ 262 (527)
+|.++.|+|||||+|++...+.... + ....-+.++++.+...|+.+.
T Consensus 153 ~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 153 WAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp HHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEE
T ss_pred HHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEE
Confidence 9999999999999999876532111 0 011235566676766676654
No 49
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.62 E-value=4e-08 Score=90.22 Aligned_cols=88 Identities=13% Similarity=0.095 Sum_probs=67.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCccccccc-ChHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA-YNATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d-~~~~aL 217 (527)
.|.++.+|..++.. +...|.++.+++.|+++ +....+.++|...+|+++++||+|+|+. .|+.. +...+|
T Consensus 40 ~G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~~~~~~~~~l 114 (202)
T 2kw5_A 40 EGRNACFLASLGYE---VTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHLPSSLRQQLY 114 (202)
T ss_dssp CTHHHHHHHTTTCE---EEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCCCHHHHHHHH
T ss_pred CCHhHHHHHhCCCe---EEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcCCHHHHHHHH
Confidence 34455566666654 33448888999988766 4566777889999999999999999964 46532 334599
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
.++.|+|||||+++++.+
T Consensus 115 ~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 115 PKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp HHHHTTCCSSEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEEe
Confidence 999999999999999875
No 50
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.62 E-value=2.6e-08 Score=97.83 Aligned_cols=85 Identities=14% Similarity=0.092 Sum_probs=66.1
Q ss_pred hccccccc---cCCeeEEeeccCcChHHHHHHHHHc-------CCCcEEeeccccCCCCCC------CcccEEEecCccc
Q 009719 144 ASFGGSML---SENILTLSFAPRDSHKAQIQFALER-------GIPAFVAMLGTRRLPFPA------FSFDIVHCSRCLI 207 (527)
Q Consensus 144 gsfga~Ll---~r~V~~msiAp~D~seaqvq~A~eR-------g~pa~~~v~dae~LPFpD------~SFDlV~cs~~l~ 207 (527)
|.++..|. ..+..++.+ |.++.|++.|+++ ...+.+.++|++.+|+++ ++||+|+|+.+++
T Consensus 48 G~~~~~la~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~ 124 (299)
T 3g5t_A 48 GTATLQMAQELKPFEQIIGS---DLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAH 124 (299)
T ss_dssp THHHHHHHHHSSCCSEEEEE---ESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGG
T ss_pred CHHHHHHHHhCCCCCEEEEE---eCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeEEeHhhHHH
Confidence 44444555 344443333 7788999999876 335678889999999998 9999999999987
Q ss_pred ccccChHHHHHHHhhcccCCcEEEEe
Q 009719 208 PFTAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 208 hw~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
|+ +. ..+|.++.|+|||||+|++.
T Consensus 125 ~~-~~-~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 125 WF-DF-EKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp GS-CH-HHHHHHHHHHEEEEEEEEEE
T ss_pred Hh-CH-HHHHHHHHHhcCCCcEEEEE
Confidence 77 44 45999999999999999983
No 51
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.62 E-value=2.6e-08 Score=93.38 Aligned_cols=70 Identities=24% Similarity=0.314 Sum_probs=61.0
Q ss_pred cChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 164 D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.+++.|+++ ...+..++...+|+++++||+|+|..+++|+.+... +|.++.|+|||||+++++.+.
T Consensus 72 D~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 72 EPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTTICFVDDPER-ALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp ESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHH-HHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHH-HHHHHHHHcCCCcEEEEEEeC
Confidence 7788999999988 355667788899999999999999999988866554 999999999999999998763
No 52
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.62 E-value=3.8e-08 Score=96.34 Aligned_cols=89 Identities=16% Similarity=0.153 Sum_probs=69.0
Q ss_pred hhccccccccC---CeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSE---NILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r---~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
.|.++..|.++ +..+.. .|.++.|++.|+++ +..+.+.++|+..+|++ ++||+|+|..+++|+.+...
T Consensus 33 ~G~~~~~l~~~~~~~~~v~g---vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~- 107 (284)
T 3gu3_A 33 YGYLGLVLMPLLPEGSKYTG---IDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAFLLHMTTPET- 107 (284)
T ss_dssp TTHHHHHHTTTSCTTCEEEE---EESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESCGGGCSSHHH-
T ss_pred CCHHHHHHHHhCCCCCEEEE---EECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECChhhcCCCHHH-
Confidence 45555555554 343333 37788999988875 23466788899999995 69999999999988876665
Q ss_pred HHHHHhhcccCCcEEEEecCC
Q 009719 216 YLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~pp 236 (527)
+|.++.|+|||||++++..+.
T Consensus 108 ~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 108 MLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp HHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHcCCCCEEEEEecc
Confidence 999999999999999998874
No 53
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.60 E-value=3.8e-08 Score=92.04 Aligned_cols=89 Identities=15% Similarity=0.171 Sum_probs=68.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecC-ccccccc--ChHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSR-CLIPFTA--YNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~-~l~hw~d--~~~~ 215 (527)
.|.++..|..++.. +...|.++.+++.|+++ +..+.+.++|...+|++ ++||+|+|.. +++|+.+ +...
T Consensus 48 ~G~~~~~l~~~~~~---~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~ 123 (246)
T 1y8c_A 48 TGNLTENLCPKFKN---TWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKK 123 (246)
T ss_dssp TSTTHHHHGGGSSE---EEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHH
T ss_pred CCHHHHHHHHCCCc---EEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCccccccCCHHHHHH
Confidence 34455556666654 33448888999988865 33567778899999998 8999999998 9988843 2335
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|.++.|+|||||+|+++.+
T Consensus 124 ~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 124 YFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp HHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEec
Confidence 99999999999999999876
No 54
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.59 E-value=1.1e-07 Score=93.83 Aligned_cols=74 Identities=16% Similarity=0.073 Sum_probs=61.8
Q ss_pred ccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChH--HHHHHHhhcccCCcEEEE
Q 009719 161 APRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA--TYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 161 Ap~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~--~aL~Ei~RVLRPGG~lvi 232 (527)
...|.++.+++.|+++ ++. +.+.++|...+|++ ++||+|+|..+++|+++... .+|.|+.|+|||||+|++
T Consensus 147 ~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 147 VGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp EEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3337788999999876 333 56788999999998 99999999999999877665 279999999999999999
Q ss_pred ecC
Q 009719 233 SGP 235 (527)
Q Consensus 233 S~p 235 (527)
+..
T Consensus 226 ~~~ 228 (305)
T 3ocj_A 226 SFL 228 (305)
T ss_dssp ECC
T ss_pred Eec
Confidence 873
No 55
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.58 E-value=5.9e-08 Score=90.34 Aligned_cols=90 Identities=9% Similarity=0.019 Sum_probs=65.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC----C------CcEEeeccccCCCCCCCcccEEEecCcccccccC
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----I------PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~------pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
.|.++.+|..++-. ..+...|.++.+++.|+++. + .+.+.++|...+++++++||+|+|..+++|+.+.
T Consensus 40 ~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~ 118 (219)
T 3jwg_A 40 EGNLLSLLLKDKSF-EQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVIEVIEHLDEN 118 (219)
T ss_dssp TCHHHHHHHTSTTC-CEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEESCGGGCCHH
T ss_pred CCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEHHHHHhCCHH
Confidence 34444455554410 12333377889999998762 2 4567788888999999999999999999998755
Q ss_pred h-HHHHHHHhhcccCCcEEEEe
Q 009719 213 N-ATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 213 ~-~~aL~Ei~RVLRPGG~lviS 233 (527)
. ..+|.++.|+|||||.++.+
T Consensus 119 ~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 119 RLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp HHHHHHHHHHTTTCCSEEEEEE
T ss_pred HHHHHHHHHHHhhCCCEEEEEc
Confidence 3 34999999999999966554
No 56
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.57 E-value=5.6e-08 Score=88.20 Aligned_cols=88 Identities=15% Similarity=0.187 Sum_probs=66.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccC-hHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-NATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-~~~a 216 (527)
.|.++..|..++..+. ..|.++.+++.|+++ +. ...+..+|...+|+ +++||+|+|..+++|+... ...+
T Consensus 43 ~G~~~~~l~~~~~~v~---~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~~~~~~~ 118 (199)
T 2xvm_A 43 NGRNSLYLAANGYDVD---AWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMFLEAKTIPGL 118 (199)
T ss_dssp TSHHHHHHHHTTCEEE---EEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGGSCGGGHHHH
T ss_pred CCHHHHHHHHCCCeEE---EEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhhCCHHHHHHH
Confidence 3444555666665333 337778888888754 44 46677889999999 8999999999999888632 3359
Q ss_pred HHHHhhcccCCcEEEEec
Q 009719 217 LIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~ 234 (527)
|.++.|+|||||++++..
T Consensus 119 l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 119 IANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp HHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHhcCCCeEEEEEE
Confidence 999999999999988754
No 57
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.57 E-value=4.7e-08 Score=90.07 Aligned_cols=87 Identities=20% Similarity=0.235 Sum_probs=65.2
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCC---CCCCC-cccEEEecCcccccccChHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRL---PFPAF-SFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~L---PFpD~-SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
.|.++.+|..++..+.. .|.++.+++.|+++ ....+..++...+ |++++ +||+|+|+.+++ ..+... +|.
T Consensus 63 ~G~~~~~l~~~~~~v~~---vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~~~~-~l~ 136 (227)
T 3e8s_A 63 EGWLLRALADRGIEAVG---VDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQDIIE-LLS 136 (227)
T ss_dssp TCHHHHHHHTTTCEEEE---EESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSCCHH-HHH
T ss_pred CCHHHHHHHHCCCEEEE---EcCCHHHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECchhh-hhhHHH-HHH
Confidence 45555566677664444 48889999999988 3445555666555 76655 499999999986 555444 999
Q ss_pred HHhhcccCCcEEEEecC
Q 009719 219 EVDRLLRPGGYLVISGP 235 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~p 235 (527)
++.|+|||||+|+++.+
T Consensus 137 ~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 137 AMRTLLVPGGALVIQTL 153 (227)
T ss_dssp HHHHTEEEEEEEEEEEC
T ss_pred HHHHHhCCCeEEEEEec
Confidence 99999999999999886
No 58
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.53 E-value=8.3e-08 Score=89.41 Aligned_cols=91 Identities=9% Similarity=0.045 Sum_probs=65.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC------CcEEeeccccCCCCCCCcccEEEecCcccccccC
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI------PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~------pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
.|.++.+|..++-. ..+...|.++.+++.|+++ ++ .+.+.++|...+++++++||+|+|..+++|+.+.
T Consensus 40 ~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (217)
T 3jwh_A 40 QGNLLKILLKDSFF-EQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVIEVIEHLDLS 118 (217)
T ss_dssp TCHHHHHHHHCTTC-SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEESCGGGCCHH
T ss_pred CCHHHHHHHhhCCC-CEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeHHHHHcCCHH
Confidence 34444455544310 1233337788999999876 22 3567778888889999999999999999998654
Q ss_pred h-HHHHHHHhhcccCCcEEEEec
Q 009719 213 N-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 213 ~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
. ..+|.++.|+|||||.++++.
T Consensus 119 ~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 119 RLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp HHHHHHHHHHTTTCCSEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEcc
Confidence 2 349999999999999776654
No 59
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.51 E-value=3.9e-08 Score=90.11 Aligned_cols=90 Identities=20% Similarity=0.228 Sum_probs=67.3
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCC---CcEEeeccccCCCCCCCcccEEEecCcccccc----------
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFT---------- 210 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~---------- 210 (527)
|.++..|...+.. .+...|.++.+++.|+++.. .+.+.++|...+|+++++||+|+|..++.|..
T Consensus 54 G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~ 131 (215)
T 2pxx_A 54 SALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVS 131 (215)
T ss_dssp CSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCC
T ss_pred cHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccc
Confidence 4444455555542 33344778899999988742 35677889999999999999999988776543
Q ss_pred ----cChHHHHHHHhhcccCCcEEEEecC
Q 009719 211 ----AYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 211 ----d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+....+|.|+.|+|||||++++.++
T Consensus 132 ~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 132 SEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred cchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 1223599999999999999999887
No 60
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.49 E-value=3.9e-08 Score=93.37 Aligned_cols=89 Identities=16% Similarity=0.073 Sum_probs=63.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC----CCcEEeeccccCC--CCCCCcccEEEe-cCcccccccCh--
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----IPAFVAMLGTRRL--PFPAFSFDIVHC-SRCLIPFTAYN-- 213 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~pa~~~v~dae~L--PFpD~SFDlV~c-s~~l~hw~d~~-- 213 (527)
.|.++.+|...+.. .+...|.++.|++.|+++. ..+.+.+++++.+ ||++++||+|+| ...+ +..+..
T Consensus 71 tG~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~-~~~~~~~~ 147 (236)
T 1zx0_A 71 MAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL-SEETWHTH 147 (236)
T ss_dssp TSHHHHHHHTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC-BGGGTTTH
T ss_pred CCHHHHHHHhcCCC--eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc-chhhhhhh
Confidence 34444455554442 4445588999999998763 3456778888888 999999999999 5553 322221
Q ss_pred --HHHHHHHhhcccCCcEEEEec
Q 009719 214 --ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 214 --~~aL~Ei~RVLRPGG~lviS~ 234 (527)
..+|.|+.|+|||||+|++..
T Consensus 148 ~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 148 QFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HHHHHHHTHHHHEEEEEEEEECC
T ss_pred hHHHHHHHHHHhcCCCeEEEEEe
Confidence 237999999999999999864
No 61
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.48 E-value=5.1e-08 Score=90.49 Aligned_cols=89 Identities=20% Similarity=0.216 Sum_probs=66.8
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCccccccc-ChHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA-YNATYLI 218 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d-~~~~aL~ 218 (527)
|.++..|..++. .+...|.++.+++.|+++ +..+.+..+|...+|+++++||+|+|..+++++.. +...+|.
T Consensus 50 G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~ 126 (227)
T 1ve3_A 50 GGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEPLELNQVFK 126 (227)
T ss_dssp SHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCCHHHHHHHHH
T ss_pred CHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCCHHHHHHHHH
Confidence 444555556655 344447788899888765 34567788899999999999999999988433332 2234999
Q ss_pred HHhhcccCCcEEEEecC
Q 009719 219 EVDRLLRPGGYLVISGP 235 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~p 235 (527)
++.|+|||||++++..+
T Consensus 127 ~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 127 EVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp HHHHHEEEEEEEEEEEE
T ss_pred HHHHHcCCCcEEEEEec
Confidence 99999999999999876
No 62
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.47 E-value=5.8e-08 Score=94.32 Aligned_cols=54 Identities=22% Similarity=0.153 Sum_probs=42.4
Q ss_pred EeeccccC-CCCC---CCcccEEEecCccccccc---ChHHHHHHHhhcccCCcEEEEecC
Q 009719 182 VAMLGTRR-LPFP---AFSFDIVHCSRCLIPFTA---YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 182 ~~v~dae~-LPFp---D~SFDlV~cs~~l~hw~d---~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.++|... .|++ +++||+|+|+.|++|... +...+|+++.|+|||||+|++++.
T Consensus 138 ~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 138 VLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp EEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 55667655 5654 789999999999987532 223499999999999999999974
No 63
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.47 E-value=1.1e-07 Score=88.94 Aligned_cols=88 Identities=15% Similarity=0.046 Sum_probs=67.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecC-cccccccC--hHHHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSR-CLIPFTAY--NATYLIEV 220 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~-~l~hw~d~--~~~aL~Ei 220 (527)
|.++..|..++. .+...|.++.+++.|+++...+.+..+|...+|+ +++||+|+|+. +++|..+. ...+|.++
T Consensus 52 G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~ 127 (239)
T 3bxo_A 52 GTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASF 127 (239)
T ss_dssp SHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHH
T ss_pred CHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHH
Confidence 444455555544 3334477889999999886556778889989998 78999999866 77776432 23599999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.|+|||||+++++.+
T Consensus 128 ~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 128 AEHLEPGGVVVVEPW 142 (239)
T ss_dssp HHTEEEEEEEEECCC
T ss_pred HHhcCCCeEEEEEec
Confidence 999999999999865
No 64
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.46 E-value=7.5e-08 Score=96.70 Aligned_cols=91 Identities=16% Similarity=0.100 Sum_probs=62.4
Q ss_pred hhccccc-c---ccCCeeEEeeccCcChHHHHHHHHHc----CCC-------cEEeeccc------cCC--CCCCCcccE
Q 009719 143 VASFGGS-M---LSENILTLSFAPRDSHKAQIQFALER----GIP-------AFVAMLGT------RRL--PFPAFSFDI 199 (527)
Q Consensus 143 vgsfga~-L---l~r~V~~msiAp~D~seaqvq~A~eR----g~p-------a~~~v~da------e~L--PFpD~SFDl 199 (527)
+|+.+|. + +..+.. .+...|.++.|++.|+++ +.. +.+.+.+. +.| ++++++||+
T Consensus 55 lGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~ 132 (302)
T 2vdw_A 55 IDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNI 132 (302)
T ss_dssp TTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEE
T ss_pred EecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCCeeE
Confidence 6665553 2 333321 344448889999999876 221 23444444 444 578999999
Q ss_pred EEecCccccccc--ChHHHHHHHhhcccCCcEEEEecC
Q 009719 200 VHCSRCLIPFTA--YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 200 V~cs~~l~hw~d--~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.|..++|+..+ +...+|+|+.|+|||||+|+++++
T Consensus 133 V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 133 IDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp EEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 999998865322 234599999999999999999987
No 65
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.45 E-value=4e-08 Score=94.46 Aligned_cols=88 Identities=17% Similarity=0.049 Sum_probs=62.5
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcC----CCcEEeeccccC--CCCCCCcccEEEe-----cCcccccccC
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----IPAFVAMLGTRR--LPFPAFSFDIVHC-----SRCLIPFTAY 212 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~pa~~~v~dae~--LPFpD~SFDlV~c-----s~~l~hw~d~ 212 (527)
|..+.+|...... +++..|.++.|++.|+++. ....+..++++. .++++++||.|.+ ...+.|+.+.
T Consensus 72 G~~~~~~~~~~~~--~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~ 149 (236)
T 3orh_A 72 AIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQF 149 (236)
T ss_dssp SHHHHHHTTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHH
T ss_pred cHHHHHHHHhCCc--EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeecccchhhhcch
Confidence 3334455555443 3445588899999998763 334566677654 4789999999974 4455666655
Q ss_pred hHHHHHHHhhcccCCcEEEEec
Q 009719 213 NATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 213 ~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
.. ++.|+.|||||||+|++..
T Consensus 150 ~~-~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 150 NF-IKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HH-HHHTHHHHEEEEEEEEECC
T ss_pred hh-hhhhhhheeCCCCEEEEEe
Confidence 55 9999999999999999864
No 66
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.45 E-value=8.9e-08 Score=94.04 Aligned_cols=89 Identities=13% Similarity=0.034 Sum_probs=68.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC--------CCcEEeeccccCCCCCCCcccEEEecCcccccccC--
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG--------IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-- 212 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg--------~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-- 212 (527)
.|.++..|..++..+.. .|.++.+++.|+++. ..+.+.++|...+|+ +++||+|+|+..+.|+.+.
T Consensus 93 ~G~~~~~l~~~~~~v~g---vD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~ 168 (299)
T 3g2m_A 93 MGRLTFPFLDLGWEVTA---LELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSINELDEAD 168 (299)
T ss_dssp TTTTHHHHHTTTCCEEE---EESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHHTTSCHHH
T ss_pred CCHHHHHHHHcCCeEEE---EECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcccccCCHHH
Confidence 45555666677654333 377889999998762 236788899999999 7999999988665666553
Q ss_pred hHHHHHHHhhcccCCcEEEEecC
Q 009719 213 NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 213 ~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
...+|.++.|+|||||+|+++.+
T Consensus 169 ~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 169 RRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEee
Confidence 24599999999999999999886
No 67
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.44 E-value=7.8e-08 Score=92.87 Aligned_cols=89 Identities=18% Similarity=0.147 Sum_probs=64.6
Q ss_pred ccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCC-CCCcccEEEecCccccc---ccChH
Q 009719 145 SFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPF-PAFSFDIVHCSRCLIPF---TAYNA 214 (527)
Q Consensus 145 sfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPF-pD~SFDlV~cs~~l~hw---~d~~~ 214 (527)
.++..|...+.. .+...|.++.+++.|+++ +. .+.+.++|...+|+ ++++||+|+|..+++|. ..+..
T Consensus 77 ~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~ 154 (298)
T 1ri5_A 77 GDLLKYERAGIG--EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLD 154 (298)
T ss_dssp TTHHHHHHHTCS--EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHH
T ss_pred HHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchhhhhcCCHHHHH
Confidence 333344444431 233337788899988876 22 24677889999999 69999999999998662 12223
Q ss_pred HHHHHHhhcccCCcEEEEecC
Q 009719 215 TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+|.++.|+|||||+|+++.+
T Consensus 155 ~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 155 IAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp HHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEEC
Confidence 599999999999999999987
No 68
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.43 E-value=2e-07 Score=90.48 Aligned_cols=86 Identities=12% Similarity=0.080 Sum_probs=63.8
Q ss_pred hccccccc-cCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCccccccc-ChHH
Q 009719 144 ASFGGSML-SENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA-YNAT 215 (527)
Q Consensus 144 gsfga~Ll-~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d-~~~~ 215 (527)
|.++.+|. ..+. .+...|.++.|++.|+++ +. .+.+..+|.+.+| ++||+|+|..+++|+.+ +...
T Consensus 76 G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~ 149 (287)
T 1kpg_A 76 GATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDA 149 (287)
T ss_dssp SHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHH
T ss_pred cHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHH
Confidence 33444444 3344 333447788999999876 33 3566778887777 89999999999999953 3345
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|.|+.|+|||||+++++.+
T Consensus 150 ~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 150 FFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp HHHHHHHHSCTTCEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEEEe
Confidence 99999999999999999876
No 69
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.43 E-value=8.2e-08 Score=93.82 Aligned_cols=53 Identities=26% Similarity=0.429 Sum_probs=41.0
Q ss_pred EeeccccC-CCCC-----CCcccEEEecCcccccccC---hHHHHHHHhhcccCCcEEEEec
Q 009719 182 VAMLGTRR-LPFP-----AFSFDIVHCSRCLIPFTAY---NATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 182 ~~v~dae~-LPFp-----D~SFDlV~cs~~l~hw~d~---~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
+.++|+.. +||+ +++||+|+|+.+++|.... ...+|.|+.|+|||||+|+++.
T Consensus 154 ~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 154 VLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp EECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 34457766 7754 5679999999999774322 3349999999999999999975
No 70
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.43 E-value=3e-07 Score=90.33 Aligned_cols=87 Identities=13% Similarity=0.072 Sum_probs=65.6
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh--
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-- 213 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-- 213 (527)
.|.++.+|..+ +.. +...|.++.|++.|+++ +++ +.+..+|...+ +++||+|+|..+++|+++..
T Consensus 83 ~G~~~~~la~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~ 156 (302)
T 3hem_A 83 WGSTMRHAVAEYDVN---VIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGD 156 (302)
T ss_dssp TSHHHHHHHHHHCCE---EEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSC
T ss_pred CcHHHHHHHHhCCCE---EEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchHHhcCccccc
Confidence 34444455555 543 33447788999998865 444 56777888776 89999999999999996651
Q ss_pred ------HHHHHHHhhcccCCcEEEEecC
Q 009719 214 ------ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 214 ------~~aL~Ei~RVLRPGG~lviS~p 235 (527)
..+|.++.|+|||||++++.+.
T Consensus 157 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 157 AGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp CCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred cchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 3499999999999999999875
No 71
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.42 E-value=2.7e-07 Score=89.73 Aligned_cols=88 Identities=11% Similarity=0.115 Sum_probs=68.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL 217 (527)
.|.++.+|..++..+. ..|.++.+++.|+++ ++.+.+..+|...+++ +++||+|+|+.+++|+.+.. ..+|
T Consensus 131 ~G~~~~~l~~~g~~v~---~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~~~~~~~~l 206 (286)
T 3m70_A 131 QGRNSLYLSLLGYDVT---SWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFLNRERVPSII 206 (286)
T ss_dssp TCHHHHHHHHTTCEEE---EEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGSCGGGHHHHH
T ss_pred CCHHHHHHHHCCCeEE---EEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhCCHHHHHHHH
Confidence 4555556667766433 347788888888764 5567788889999988 89999999999998886544 3599
Q ss_pred HHHhhcccCCcEEEEec
Q 009719 218 IEVDRLLRPGGYLVISG 234 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~ 234 (527)
.++.|+|||||++++..
T Consensus 207 ~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 207 KNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp HHHHHTEEEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEE
Confidence 99999999999988754
No 72
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.41 E-value=1.4e-07 Score=90.73 Aligned_cols=66 Identities=26% Similarity=0.387 Sum_probs=57.2
Q ss_pred CcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 163 RDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 163 ~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
.|.++.+++.|++++..+.+.++|.+.+||++++||+|+|..+. .++.|+.|+|||||++++.+|.
T Consensus 115 vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~--------~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 115 LDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP--------CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp EESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC--------CCHHHHHHHEEEEEEEEEEEEC
T ss_pred EeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh--------hhHHHHHHhcCCCcEEEEEEcC
Confidence 37789999999998866778888999999999999999986542 2699999999999999999873
No 73
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.41 E-value=1.8e-07 Score=88.82 Aligned_cols=90 Identities=19% Similarity=0.185 Sum_probs=63.8
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcC--CC--------------------------------c-EEeecccc
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERG--IP--------------------------------A-FVAMLGTR 188 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg--~p--------------------------------a-~~~v~dae 188 (527)
|.++..|..++. ..+...|.++.+++.|+++. .+ + .+.++|..
T Consensus 68 G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~ 145 (265)
T 2i62_A 68 TIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVT 145 (265)
T ss_dssp CCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTT
T ss_pred cHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeec
Confidence 344444555554 24445588899999987652 11 3 56777877
Q ss_pred CC-CCCC---CcccEEEecCcccccccC---hHHHHHHHhhcccCCcEEEEecC
Q 009719 189 RL-PFPA---FSFDIVHCSRCLIPFTAY---NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 189 ~L-PFpD---~SFDlV~cs~~l~hw~d~---~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+ |+++ ++||+|+|..+++|.... ...+|.++.|+|||||+|+++..
T Consensus 146 ~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 146 QSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp SSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 65 4467 999999999999843322 23499999999999999999874
No 74
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.39 E-value=8.4e-07 Score=82.29 Aligned_cols=90 Identities=18% Similarity=0.300 Sum_probs=65.0
Q ss_pred CCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEE
Q 009719 153 ENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 153 r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lvi 232 (527)
..++++++++. ...+.+++...+|+++++||+|+|+.++ |+.+ ...+|.|+.|+|||||++++
T Consensus 87 ~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~~~-~~~~l~~~~~~L~~gG~l~i 149 (215)
T 2zfu_A 87 NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLSL-MGTN-IRDFLEEANRVLKPGGLLKV 149 (215)
T ss_dssp SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESCC-CSSC-HHHHHHHHHHHEEEEEEEEE
T ss_pred ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehhc-cccC-HHHHHHHHHHhCCCCeEEEE
Confidence 56677766654 2345677888999999999999999998 5544 44599999999999999999
Q ss_pred ecCCCCCCCchhHHHHHHHHHHhcceEEeee
Q 009719 233 SGPPVQWPKQDKEWADLQAVARALCYELIAV 263 (527)
Q Consensus 233 S~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~ 263 (527)
+.+..... .-+.+.++.+...++.+..
T Consensus 150 ~~~~~~~~----~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 150 AEVSSRFE----DVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp EECGGGCS----CHHHHHHHHHHTTEEEEEE
T ss_pred EEcCCCCC----CHHHHHHHHHHCCCEEEEE
Confidence 87632211 2344555666666766553
No 75
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.35 E-value=3.2e-07 Score=84.51 Aligned_cols=133 Identities=15% Similarity=0.185 Sum_probs=87.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcccccccc----ccCCCCCCCC-CccchhhhcCccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIGVYH----DWCEPFSTYP-RTYDLIHVSGIESLI 448 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~~h----dwce~fstYP-rtyDLiHa~~~fs~~ 448 (527)
.+|||+|||.|.++.+|.+...- |+-+|-. ..+..+-+++.+...+ +..+. +..+ .+||+|.+..++. .
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~fD~v~~~~~l~-~ 128 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRGIE---AVGVDGDRTLVDAARAAGAGEVHLASYAQLAEA-KVPVGKDYDLICANFALL-H 128 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTTCE---EEEEESCHHHHHHHHHTCSSCEEECCHHHHHTT-CSCCCCCEEEEEEESCCC-S
T ss_pred CEEEEeCCCCCHHHHHHHHCCCE---EEEEcCCHHHHHHHHHhcccccchhhHHhhccc-ccccCCCccEEEECchhh-h
Confidence 78999999999999999888653 3333433 5666677775432222 22111 2233 5699999987776 3
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEeCCH--------------------------------HHHHHHHHHHhcC
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP--------------------------------EVIDKVSRIANTV 496 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~--------------------------------~~~~~i~~i~~~l 496 (527)
. +...+|-|+-|+|+|||++++.+.. ...+.+.++++.-
T Consensus 129 ~---------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 199 (227)
T 3e8s_A 129 Q---------DIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMA 199 (227)
T ss_dssp S---------CCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHT
T ss_pred h---------hHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHc
Confidence 2 3468999999999999999997420 0467888888988
Q ss_pred CceeEEecCCCCCC---CCceEEEEEec
Q 009719 497 RWTAAVHDKEPGSN---GREKILVATKS 521 (527)
Q Consensus 497 ~W~~~~~~~e~~~~---~~ekiLi~~K~ 521 (527)
-+++........+. ...-+++++|.
T Consensus 200 Gf~~~~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 200 GLRLVSLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp TEEEEEEECCCCTTCSSCSCEEEEEEEC
T ss_pred CCeEEEEecCCCCCCCCceeEEEEeecC
Confidence 89876543211111 12456777763
No 76
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.35 E-value=4.2e-07 Score=89.85 Aligned_cols=86 Identities=8% Similarity=0.047 Sum_probs=64.5
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCccccccc-ChHH
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA-YNAT 215 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d-~~~~ 215 (527)
|.++.+|..+ +.. +...|.++.|++.|+++ |+. +.+..+|...+| ++||+|+|..+++|+.. +...
T Consensus 102 G~~~~~la~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~ 175 (318)
T 2fk8_A 102 GTTMRRAVERFDVN---VIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDD 175 (318)
T ss_dssp SHHHHHHHHHHCCE---EEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHH
T ss_pred hHHHHHHHHHCCCE---EEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHH
Confidence 3344445544 543 33347788999999876 432 567778888876 89999999999999853 3345
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|.|+.|+|||||+++++.+
T Consensus 176 ~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 176 FFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp HHHHHHHHSCTTCEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEEe
Confidence 99999999999999999886
No 77
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.34 E-value=1.3e-06 Score=80.95 Aligned_cols=150 Identities=15% Similarity=0.191 Sum_probs=95.0
Q ss_pred cccchhhHHHHHHHHHHHHHh-----------hhcc-CCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhH
Q 009719 345 DVFEADSRRWRRRVAYYKNTL-----------NVKL-GTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSV 412 (527)
Q Consensus 345 ~~f~~d~~~W~~~v~~Y~~~l-----------~~~i-~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~v 412 (527)
+.|..+.+.|......|.... ...+ ....-.+|||+|||.|.++..|. ..|..+-+-+. .+.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~----~~~~ 101 (215)
T 2zfu_A 27 RLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIR-NPVHCFDLASL----DPRV 101 (215)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHTSCTTSCEEEETCTTCHHHHHCC-SCEEEEESSCS----STTE
T ss_pred HHHHHhHHHHHHHHHHHHhhhcccchhHHHHHHHHHhccCCCCeEEEECCcCCHHHHHhh-ccEEEEeCCCC----CceE
Confidence 447777778877666664421 1111 11233579999999999999884 44554444333 1111
Q ss_pred hhhccccccccccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHH---HHHHH
Q 009719 413 IYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPE---VIDKV 489 (527)
Q Consensus 413 i~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~---~~~~i 489 (527)
. .+ |. +.++.-+.+||+|.+..++. +. +...+|-|+-|+|+|||.+++.+-.. ..+++
T Consensus 102 --~---~~---d~-~~~~~~~~~fD~v~~~~~l~-~~---------~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~ 162 (215)
T 2zfu_A 102 --T---VC---DM-AQVPLEDESVDVAVFCLSLM-GT---------NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTF 162 (215)
T ss_dssp --E---ES---CT-TSCSCCTTCEEEEEEESCCC-SS---------CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHH
T ss_pred --E---Ee---cc-ccCCCCCCCEeEEEEehhcc-cc---------CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHH
Confidence 1 11 21 11222247899999987774 22 34788999999999999999986443 45678
Q ss_pred HHHHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 490 SRIANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 490 ~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
.++++..-+++...+...+ .-.+++++|.
T Consensus 163 ~~~l~~~Gf~~~~~~~~~~---~~~~~~~~k~ 191 (215)
T 2zfu_A 163 LRAVTKLGFKIVSKDLTNS---HFFLFDFQKT 191 (215)
T ss_dssp HHHHHHTTEEEEEEECCST---TCEEEEEEEC
T ss_pred HHHHHHCCCEEEEEecCCC---eEEEEEEEec
Confidence 8888888888766543322 3467888885
No 78
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.34 E-value=2.3e-07 Score=86.98 Aligned_cols=87 Identities=16% Similarity=0.112 Sum_probs=65.2
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecC-cccccccC--hHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSR-CLIPFTAY--NATY 216 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~-~l~hw~d~--~~~a 216 (527)
|.++..|..+ . .+...|.++.+++.|+++ +....+..+|...+|++ ++||+|+|.. +++|+.+. ...+
T Consensus 45 G~~~~~l~~~-~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~ 119 (243)
T 3d2l_A 45 GTATLLLADH-Y---EVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNYLQTEADVKQT 119 (243)
T ss_dssp CHHHHHHTTT-S---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHH
T ss_pred CHHHHHHhhC-C---eEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHH
Confidence 4444445554 2 344447788899888765 34567778898899987 8999999987 88777432 2349
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|+|||||+++++.+
T Consensus 120 l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 120 FDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhcCCCeEEEEEcC
Confidence 9999999999999999876
No 79
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.31 E-value=4.7e-07 Score=86.76 Aligned_cols=152 Identities=14% Similarity=0.107 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc--cccccccccCCCCC
Q 009719 354 WRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR--GLIGVYHDWCEPFS 430 (527)
Q Consensus 354 W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR--GLiG~~hdwce~fs 430 (527)
|...+....+.+...+.. -.+|||+|||.|.++..|.+... +|+-+|-. ..+..+-++ ++-=+..|.. .++
T Consensus 33 ~~~~~~~~~~~l~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~ 106 (263)
T 3pfg_A 33 YHREAADLAALVRRHSPK--AASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMR-DFS 106 (263)
T ss_dssp HHHHHHHHHHHHHHHCTT--CCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTT-TCC
T ss_pred HHHHHHHHHHHHHhhCCC--CCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChH-HCC
Confidence 334333334444433333 36899999999999999988753 34444433 555555554 2211122322 233
Q ss_pred CCCCccchhhhcC-ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC---------------------------
Q 009719 431 TYPRTYDLIHVSG-IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--------------------------- 482 (527)
Q Consensus 431 tYPrtyDLiHa~~-~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--------------------------- 482 (527)
. +.+||+|.+.. +|.... +.-++..+|-++-|+|+|||.++|.+-
T Consensus 107 ~-~~~fD~v~~~~~~l~~~~------~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (263)
T 3pfg_A 107 L-GRRFSAVTCMFSSIGHLA------GQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVS 179 (263)
T ss_dssp C-SCCEEEEEECTTGGGGSC------HHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEE
T ss_pred c-cCCcCEEEEcCchhhhcC------CHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEE
Confidence 2 78999999986 776542 112345779999999999999999520
Q ss_pred -------------------H---------------HHHHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 483 -------------------P---------------EVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 483 -------------------~---------------~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
. -..++++++++.--+++...... .....++|++|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~---~~~~~~~va~K~ 249 (263)
T 3pfg_A 180 HSSREGEATRIEVHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGG---PSGRGLFTGLPG 249 (263)
T ss_dssp EEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESST---TTSSCEEEEEEC
T ss_pred EEEecCcEEEEEEEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCC---CCCceeEEEecC
Confidence 0 02678999999888887665332 234568999996
No 80
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.29 E-value=4e-07 Score=86.01 Aligned_cols=82 Identities=12% Similarity=0.125 Sum_probs=63.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccc-cCCCCC-CCcccEEEecCcccccccChHHHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGT-RRLPFP-AFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~da-e~LPFp-D~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
.|.++.+|..++..++.+ |.++.+++.|+++...+.+.++|. +.+||+ +++||+|+|+ .+... +|.++
T Consensus 59 ~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------~~~~~-~l~~~ 128 (226)
T 3m33_A 59 HGPDAARFGPQAARWAAY---DFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------RGPTS-VILRL 128 (226)
T ss_dssp TSHHHHHHGGGSSEEEEE---ESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------SCCSG-GGGGH
T ss_pred CCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------CCHHH-HHHHH
Confidence 455555666666544444 888999999999865677888887 789999 9999999987 23334 89999
Q ss_pred hhcccCCcEEEEec
Q 009719 221 DRLLRPGGYLVISG 234 (527)
Q Consensus 221 ~RVLRPGG~lviS~ 234 (527)
.|+|||||+|+...
T Consensus 129 ~~~LkpgG~l~~~~ 142 (226)
T 3m33_A 129 PELAAPDAHFLYVG 142 (226)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHcCCCcEEEEeC
Confidence 99999999999433
No 81
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.28 E-value=1.2e-06 Score=79.33 Aligned_cols=90 Identities=14% Similarity=0.103 Sum_probs=60.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCC-CCCCcccEEEecCccccc-------
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLP-FPAFSFDIVHCSRCLIPF------- 209 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LP-FpD~SFDlV~cs~~l~hw------- 209 (527)
.|.++..|..++..+..+ |.++.+++.|+++ +++ +.+...+.+.++ +++++||+|+++....|.
T Consensus 33 ~G~~~~~la~~~~~v~~v---D~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~ 109 (185)
T 3mti_A 33 NGNDTAFLAGLSKKVYAF---DVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYLPSADKSVIT 109 (185)
T ss_dssp TSHHHHHHHTTSSEEEEE---ESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-----------
T ss_pred CCHHHHHHHHhCCEEEEE---ECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCCCCcchhccc
Confidence 455555666665444444 7788999988765 443 456666777764 668999999987433332
Q ss_pred -ccChHHHHHHHhhcccCCcEEEEecC
Q 009719 210 -TAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 210 -~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+....+|.|+.|+|||||++++...
T Consensus 110 ~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 110 KPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 12223489999999999999999764
No 82
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.28 E-value=2.5e-07 Score=91.58 Aligned_cols=90 Identities=18% Similarity=0.157 Sum_probs=63.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcC------------CCcEEeeccccCCC----CC--CCcccEEEecCc
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERG------------IPAFVAMLGTRRLP----FP--AFSFDIVHCSRC 205 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg------------~pa~~~v~dae~LP----Fp--D~SFDlV~cs~~ 205 (527)
|.++..|...+.. .+...|.++.|++.|+++. ..+.+.++|.+.+| |+ +++||+|+|+.+
T Consensus 46 G~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~ 123 (313)
T 3bgv_A 46 GGDLLKWKKGRIN--KLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFV 123 (313)
T ss_dssp TTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETC
T ss_pred cHHHHHHHhcCCC--EEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCCEEEEEEecc
Confidence 3334444444321 3334477888998887652 13567788988886 75 459999999998
Q ss_pred ccccccC---hHHHHHHHhhcccCCcEEEEecC
Q 009719 206 LIPFTAY---NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 206 l~hw~d~---~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+++..++ ...+|.++.|+|||||+|+++.+
T Consensus 124 l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 124 CHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp GGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 7544122 23599999999999999999987
No 83
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.27 E-value=2e-07 Score=90.46 Aligned_cols=98 Identities=13% Similarity=0.107 Sum_probs=65.3
Q ss_pred eeeEeecCCCccchhhhcc-CCCeeEEEecCCCCC-CchhHhhhc----cccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 374 IRNIMDMNAFFGGFAAALT-SDPVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~-~~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
-..|||+|||.|+++..|. ..+. +|+-++-. +.+..+-++ |+..-..-.+..+..+|.+||+|.+..+|.+
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~~ 141 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFEH 141 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred cCEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchhh
Confidence 3589999999999998886 3344 33333332 555555544 4321111112222335689999999998886
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.. .-+...+|-|+-|+|+|||.+++.+
T Consensus 142 ~~-------~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 142 FG-------HERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp TC-------TTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cC-------hHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 62 1245789999999999999999975
No 84
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.23 E-value=1.2e-06 Score=81.49 Aligned_cols=160 Identities=14% Similarity=0.105 Sum_probs=92.6
Q ss_pred cchhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCC--eeEEEecCCCCC-CchhHhhhc-------
Q 009719 347 FEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDP--VWVMNVVPARKS-STLSVIYDR------- 416 (527)
Q Consensus 347 f~~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~--VwvMnvvp~~~~-ntl~vi~eR------- 416 (527)
|+.-......+.+...+.+.. ..-.+|||+|||.|.++.+|.+.. .-| +-+|-. ..+..+-++
T Consensus 7 ~~~~~~~~~~~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~ 79 (219)
T 3jwg_A 7 TEKKLNLNQQRLGTVVAVLKS----VNAKKVIDLGCGEGNLLSLLLKDKSFEQI---TGVDVSYSVLERAKDRLKIDRLP 79 (219)
T ss_dssp -----CHHHHHHHHHHHHHHH----TTCCEEEEETCTTCHHHHHHHTSTTCCEE---EEEESCHHHHHHHHHHHTGGGSC
T ss_pred CCcCCcchHHHHHHHHHHHhh----cCCCEEEEecCCCCHHHHHHHhcCCCCEE---EEEECCHHHHHHHHHHHHhhccc
Confidence 333334445555554454431 223589999999999999997653 222 222322 344444333
Q ss_pred -----cccccccccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHH-------
Q 009719 417 -----GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPE------- 484 (527)
Q Consensus 417 -----GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~------- 484 (527)
.+-=+..|. +..+.-+.+||+|-+..++.... .-.+..+|-|+-|+|+|||.+|+....+
T Consensus 80 ~~~~~~v~~~~~d~-~~~~~~~~~fD~V~~~~~l~~~~-------~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~ 151 (219)
T 3jwg_A 80 EMQRKRISLFQSSL-VYRDKRFSGYDAATVIEVIEHLD-------ENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGN 151 (219)
T ss_dssp HHHHTTEEEEECCS-SSCCGGGTTCSEEEEESCGGGCC-------HHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCC
T ss_pred cccCcceEEEeCcc-cccccccCCCCEEEEHHHHHhCC-------HHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcc
Confidence 221112232 12222237899999998888653 1123578999999999999887753221
Q ss_pred ---------------HHHH----HHHHHhcCCceeEEe---cCCCCCCCCceEEEEEec
Q 009719 485 ---------------VIDK----VSRIANTVRWTAAVH---DKEPGSNGREKILVATKS 521 (527)
Q Consensus 485 ---------------~~~~----i~~i~~~l~W~~~~~---~~e~~~~~~ekiLi~~K~ 521 (527)
..++ +++++..--+++... +..+.-....+|.|++|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 152 LFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp T-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEEEESCCCTTSCCSEEEEEEEEC
T ss_pred cCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEEecCCccccCCCCeEEEEEecc
Confidence 1222 337777778887765 333333456789999986
No 85
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.23 E-value=1.1e-06 Score=83.27 Aligned_cols=89 Identities=16% Similarity=0.148 Sum_probs=65.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCccccccc--ChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA--YNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d--~~~~a 216 (527)
.|.++..|..++..+ ...|.++.+++.|+++ +..+.+.++|...+|++ ++||+|+|..+.+|+.. ....+
T Consensus 52 ~G~~~~~l~~~~~~v---~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~ 127 (252)
T 1wzn_A 52 TGIPTLELAERGYEV---VGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKL 127 (252)
T ss_dssp TCHHHHHHHHTTCEE---EEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHH
T ss_pred CCHHHHHHHHCCCeE---EEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhcCCHHHHHHH
Confidence 344555666666543 3447888999988764 45677888899889986 78999998755444332 22359
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
|.++.|+|||||.|++..+
T Consensus 128 l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 128 FSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEecc
Confidence 9999999999999999876
No 86
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.21 E-value=6.7e-06 Score=73.29 Aligned_cols=84 Identities=15% Similarity=0.109 Sum_probs=58.6
Q ss_pred hccccccccC--CeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccc-cCCCCCCCcccEEEecCcccccccChHH
Q 009719 144 ASFGGSMLSE--NILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGT-RRLPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 144 gsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~da-e~LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
|.++.++..+ +.. +...|.++.+++.|+++ +.+ ..+..+++ +.+|..+++||+|++..+++| . .
T Consensus 37 G~~~~~l~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~~~----~-~ 108 (178)
T 3hm2_A 37 GSIAIEWLRSTPQTT---AVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTA----P-G 108 (178)
T ss_dssp THHHHHHHTTSSSEE---EEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-TTC----T-T
T ss_pred CHHHHHHHHHCCCCe---EEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcccH----H-H
Confidence 4444444554 333 33447888999998865 454 22555565 455555589999999998865 3 3
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
++.++.|+|||||+++++..
T Consensus 109 ~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 109 VFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp HHHHHHHTCCTTCEEEEEEC
T ss_pred HHHHHHHhcCCCCEEEEEee
Confidence 99999999999999999875
No 87
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.20 E-value=2.3e-07 Score=84.08 Aligned_cols=116 Identities=16% Similarity=0.235 Sum_probs=73.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc--cc-cccccCCCCCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL--IG-VYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL--iG-~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
.+|||+|||.|.++..|.+... +|+-.|.. ..+..+-+ .|+ +- +..|..+ ++. +.+||+|.+..++.
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN-LTF-DRQYDFILSTVVLM 108 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG-CCC-CCCEEEEEEESCGG
T ss_pred CeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh-CCC-CCCceEEEEcchhh
Confidence 4899999999999999977654 23333322 33333322 233 11 2223322 232 78999999998887
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeCC--------------HHHHHHHHHHHhcCCceeEEec
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--------------PEVIDKVSRIANTVRWTAAVHD 504 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--------------~~~~~~i~~i~~~l~W~~~~~~ 504 (527)
... .=....+|-++-|+|+|||.+++-+. .-..+++++++.. |++....
T Consensus 109 ~~~-------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~ 171 (199)
T 2xvm_A 109 FLE-------AKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYN 171 (199)
T ss_dssp GSC-------GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hCC-------HHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEec
Confidence 542 22356789999999999999877431 0024567777776 8876553
No 88
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.19 E-value=2e-06 Score=97.96 Aligned_cols=93 Identities=17% Similarity=0.124 Sum_probs=69.9
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----------CCC-cEEeeccccCCCCCCCcccEEEecCccccccc
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----------GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA 211 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----------g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d 211 (527)
.|.++..|..++.....+...|.++.|++.|+++ +.+ +.+.++|+..+|+++++||+|+|..+++|+.+
T Consensus 732 TG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~d 811 (950)
T 3htx_A 732 SGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEE 811 (950)
T ss_dssp SSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEEEESCGGGSCH
T ss_pred CCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEEEeCchhhCCh
Confidence 4444445555551111233337888999999772 333 56788999999999999999999999999887
Q ss_pred ChH-HHHHHHhhcccCCcEEEEecCC
Q 009719 212 YNA-TYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 212 ~~~-~aL~Ei~RVLRPGG~lviS~pp 236 (527)
... .++.|+.|+|||| .+++++|.
T Consensus 812 p~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 812 DQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp HHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred HHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 553 4899999999999 99998874
No 89
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.19 E-value=7.5e-07 Score=88.02 Aligned_cols=56 Identities=20% Similarity=0.154 Sum_probs=42.3
Q ss_pred cEEeeccccCC-----CCCCCcccEEEecCcccccc----c-ChHHHHHHHhhcccCCcEEEEecC
Q 009719 180 AFVAMLGTRRL-----PFPAFSFDIVHCSRCLIPFT----A-YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~L-----PFpD~SFDlV~cs~~l~hw~----d-~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+.++|.... ++.+++||+|+|..+++|++ + ....+|+++.|+|||||+|++...
T Consensus 156 v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 156 VVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp EEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred ceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 44555665433 47899999999999885553 1 123499999999999999999865
No 90
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.19 E-value=4.3e-07 Score=89.26 Aligned_cols=101 Identities=12% Similarity=0.125 Sum_probs=68.0
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc----ccc----ccccccCCCCCCCCCccchhhhcC
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR----GLI----GVYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR----GLi----G~~hdwce~fstYPrtyDLiHa~~ 443 (527)
-.+|||+|||.|+++..|.+. +. +|+-+|-. ..+..+-++ |+- -+..|+.+ ++.+||+|.+..
T Consensus 73 ~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~fD~v~~~~ 145 (302)
T 3hem_A 73 GMTLLDIGCGWGSTMRHAVAEYDV---NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE----FDEPVDRIVSLG 145 (302)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG----CCCCCSEEEEES
T ss_pred cCEEEEeeccCcHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH----cCCCccEEEEcc
Confidence 458999999999999998766 53 23333332 555555444 442 12233322 279999999999
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+|....+|......-....+|-|+-|+|+|||.+++.+
T Consensus 146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 146 AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99877532211122345689999999999999999975
No 91
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.16 E-value=7.4e-07 Score=81.77 Aligned_cols=133 Identities=11% Similarity=0.052 Sum_probs=88.7
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc--ccccccccCCCCCCCCCccchhhhcCccccccCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG--LIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNP 451 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG--LiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~ 451 (527)
.+|||+|||.|.++..|.....- |+-+|-. ..+..+-++. +-=+..|.. .++.-+.+||+|.+..++..+.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~-- 116 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGHQ---IEGLEPATRLVELARQTHPSVTFHHGTIT-DLSDSPKRWAGLLAWYSLIHMG-- 116 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTCC---EEEECCCHHHHHHHHHHCTTSEEECCCGG-GGGGSCCCEEEEEEESSSTTCC--
T ss_pred CeEEEecCCCCHHHHHHHhcCCe---EEEEeCCHHHHHHHHHhCCCCeEEeCccc-ccccCCCCeEEEEehhhHhcCC--
Confidence 47999999999999999777543 3333433 5555555552 111112222 2232248999999998887652
Q ss_pred CCCCCCCcccccceeecccccCCcEEEEeCCH----------------HHHHHHHHHHhcCCceeEEecCCCCCCCCceE
Q 009719 452 GSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP----------------EVIDKVSRIANTVRWTAAVHDKEPGSNGREKI 515 (527)
Q Consensus 452 ~~~~~rC~~~~illEmDRILRP~G~~iird~~----------------~~~~~i~~i~~~l~W~~~~~~~e~~~~~~eki 515 (527)
.-+...+|-|+-|+|+|||.+++.+.. -..++++++++..-|++......++ .+...
T Consensus 117 -----~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~--~p~~~ 189 (203)
T 3h2b_A 117 -----PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR--FPHAY 189 (203)
T ss_dssp -----TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT--SSEEE
T ss_pred -----HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC--Ccchh
Confidence 234578999999999999999998511 1367888999999999876655444 34555
Q ss_pred EEEEe
Q 009719 516 LVATK 520 (527)
Q Consensus 516 Li~~K 520 (527)
|+..|
T Consensus 190 l~~~~ 194 (203)
T 3h2b_A 190 LTAEA 194 (203)
T ss_dssp EEEEE
T ss_pred hhhhh
Confidence 55444
No 92
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.15 E-value=5.9e-07 Score=85.00 Aligned_cols=89 Identities=9% Similarity=-0.074 Sum_probs=64.7
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCC--CcEEeeccccCCCCCC-----CcccEEEecCcccccccC-hHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI--PAFVAMLGTRRLPFPA-----FSFDIVHCSRCLIPFTAY-NAT 215 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~--pa~~~v~dae~LPFpD-----~SFDlV~cs~~l~hw~d~-~~~ 215 (527)
|.++..|..++. .+...|.++.+++.|+++.. .+.+.++|...++++. .+||+|+|..+++|+... ...
T Consensus 68 G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~ 144 (245)
T 3ggd_A 68 GTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKREL 144 (245)
T ss_dssp SHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHH
T ss_pred CHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchhhcCCHHHHHH
Confidence 444445555544 23334778899999988743 4567788888876543 349999999998887632 235
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
+|.|+.|+|||||++++...
T Consensus 145 ~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 145 LGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEeC
Confidence 99999999999999988765
No 93
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.15 E-value=1.8e-06 Score=85.76 Aligned_cols=89 Identities=15% Similarity=-0.009 Sum_probs=65.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCC-----CCCcccEEEecCcccccccCh-HHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPF-----PAFSFDIVHCSRCLIPFTAYN-ATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPF-----pD~SFDlV~cs~~l~hw~d~~-~~a 216 (527)
+|.++..|..++..+.. .|.++.|++.|+++.... ....+.+.+++ .+++||+|+|+.+++|+...+ ..+
T Consensus 56 tG~~a~~La~~g~~V~g---vD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~ 131 (261)
T 3iv6_A 56 TRFLIEKALERGASVTV---FDFSQRMCDDLAEALADR-CVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRA 131 (261)
T ss_dssp CHHHHHHHHHTTCEEEE---EESCHHHHHHHHHHTSSS-CCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHH
T ss_pred chHHHHHHHhcCCEEEE---EECCHHHHHHHHHHHHhc-cceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHH
Confidence 45566667777764444 488999999999875332 23344444444 268999999999999886543 359
Q ss_pred HHHHhhcccCCcEEEEecCC
Q 009719 217 LIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.|+| |||++++|.+.
T Consensus 132 l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 132 CLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp HHHHHHHH-TTSEEEEEEEB
T ss_pred HHHHHHhC-cCcEEEEEecc
Confidence 99999999 99999999864
No 94
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.15 E-value=1e-05 Score=72.39 Aligned_cols=88 Identities=13% Similarity=0.051 Sum_probs=62.1
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC---cEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP---AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p---a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
|.++..+..++.. +...|.++.+++.|+++ +++ ..+..+|... ++++++||+|+|...++|-.+....+
T Consensus 64 G~~~~~~~~~~~~---v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~~~~~~~~~~ 139 (194)
T 1dus_A 64 GVIGIALADEVKS---TTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPPIRAGKEVLHRI 139 (194)
T ss_dssp SHHHHHHGGGSSE---EEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCCSTTCHHHHHHH
T ss_pred CHHHHHHHHcCCe---EEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEECCCcccchhHHHHH
Confidence 4444455555443 33337778888888765 454 5667777655 56688999999988765423333459
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
+.++.|+|||||++++..+
T Consensus 140 l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 140 IEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEEEEC
Confidence 9999999999999999887
No 95
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.12 E-value=8.9e-06 Score=75.91 Aligned_cols=94 Identities=17% Similarity=0.182 Sum_probs=64.4
Q ss_pred cChHHHHHHHHHc----CC-CcEEeeccccCCC--CCCCcccEEEecCcccccccCh--------HHHHHHHhhcccCCc
Q 009719 164 DSHKAQIQFALER----GI-PAFVAMLGTRRLP--FPAFSFDIVHCSRCLIPFTAYN--------ATYLIEVDRLLRPGG 228 (527)
Q Consensus 164 D~seaqvq~A~eR----g~-pa~~~v~dae~LP--FpD~SFDlV~cs~~l~hw~d~~--------~~aL~Ei~RVLRPGG 228 (527)
|.++.+++.|+++ ++ .+.+..+|+..++ |++++||+|++.... +|.... ..+|.++.|+|||||
T Consensus 72 D~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 150 (214)
T 1yzh_A 72 DIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSD-PWPKKRHEKRRLTYKTFLDTFKRILPENG 150 (214)
T ss_dssp ESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCC-CCCSGGGGGGSTTSHHHHHHHHHHSCTTC
T ss_pred EcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCC-CccccchhhhccCCHHHHHHHHHHcCCCc
Confidence 6677888887754 44 3567788888888 899999999998653 443311 249999999999999
Q ss_pred EEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeee
Q 009719 229 YLVISGPPVQWPKQDKEWADLQAVARALCYELIAVD 264 (527)
Q Consensus 229 ~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~ 264 (527)
.|++.+.. ..-.+.+.++.+...|+.....
T Consensus 151 ~l~~~~~~------~~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 151 EIHFKTDN------RGLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp EEEEEESC------HHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEEEeCC------HHHHHHHHHHHHHCCCeeeecc
Confidence 99998752 1112344444444456654433
No 96
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.12 E-value=8.8e-07 Score=82.52 Aligned_cols=92 Identities=21% Similarity=0.349 Sum_probs=62.2
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc---cccccccccCCCCCCCCCccchhhhcCccccccCC
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR---GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNP 451 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR---GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~ 451 (527)
+|||+|||.|.++..|.+..- +|+-+|.. ..+..+-++ ++--+..|..+.+ .+.+||+|++.+++.+..
T Consensus 45 ~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~~~-- 117 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ--LPRRYDNIVLTHVLEHID-- 117 (250)
T ss_dssp CEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC--CSSCEEEEEEESCGGGCS--
T ss_pred cEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcC--cCCcccEEEEhhHHHhhc--
Confidence 599999999999999977643 22223332 444444444 2211122222221 358999999999888664
Q ss_pred CCCCCCCcccccceeec-ccccCCcEEEEeC
Q 009719 452 GSNKNSCSLVDLMVEMD-RMLRPEGTVVVRD 481 (527)
Q Consensus 452 ~~~~~rC~~~~illEmD-RILRP~G~~iird 481 (527)
+...+|-|+- |+|+|||++++.+
T Consensus 118 -------~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 118 -------DPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp -------SHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -------CHHHHHHHHHHHhcCCCCEEEEEc
Confidence 2367999999 9999999999975
No 97
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.12 E-value=7.3e-06 Score=77.30 Aligned_cols=71 Identities=14% Similarity=0.185 Sum_probs=55.3
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCC--CCCCcccEEEecCcccccccC--------hHHHHHHHhhcccCCc
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLP--FPAFSFDIVHCSRCLIPFTAY--------NATYLIEVDRLLRPGG 228 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LP--FpD~SFDlV~cs~~l~hw~d~--------~~~aL~Ei~RVLRPGG 228 (527)
|.++.+++.|+++ +++ +.+..+|+..++ |++++||.|++.... +|... ...+|.++.|+|||||
T Consensus 69 D~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~~-p~~~~~~~~~rl~~~~~l~~~~~~LkpgG 147 (213)
T 2fca_A 69 ELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSD-PWPKKRHEKRRLTYSHFLKKYEEVMGKGG 147 (213)
T ss_dssp CSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCC-CCCSGGGGGGSTTSHHHHHHHHHHHTTSC
T ss_pred EechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECCC-CCcCccccccccCcHHHHHHHHHHcCCCC
Confidence 7788898888764 554 567788888887 889999999876543 45432 1348999999999999
Q ss_pred EEEEecC
Q 009719 229 YLVISGP 235 (527)
Q Consensus 229 ~lviS~p 235 (527)
+|++.+.
T Consensus 148 ~l~~~td 154 (213)
T 2fca_A 148 SIHFKTD 154 (213)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 9999874
No 98
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.10 E-value=2.7e-06 Score=84.92 Aligned_cols=77 Identities=17% Similarity=0.209 Sum_probs=60.5
Q ss_pred eeccCcChHHHHHHHHHcC--------C----------------------------CcEEeeccccCCCCC-CCcccEEE
Q 009719 159 SFAPRDSHKAQIQFALERG--------I----------------------------PAFVAMLGTRRLPFP-AFSFDIVH 201 (527)
Q Consensus 159 siAp~D~seaqvq~A~eRg--------~----------------------------pa~~~v~dae~LPFp-D~SFDlV~ 201 (527)
.|...|+++++++.|++.- + .+.+.++|....||+ ++.||+|+
T Consensus 139 ~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~ 218 (274)
T 1af7_A 139 KVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIF 218 (274)
T ss_dssp EEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEE
T ss_pred EEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEE
Confidence 5566689999999998741 0 234566777777787 78999999
Q ss_pred ecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 202 CSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 202 cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|..+++|+.+.. ..++.+++++|||||+|++...
T Consensus 219 crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 219 CRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHS 253 (274)
T ss_dssp ECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTT
T ss_pred ECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 999998886543 3599999999999999999554
No 99
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.08 E-value=3.9e-06 Score=85.47 Aligned_cols=70 Identities=20% Similarity=0.184 Sum_probs=56.7
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccCC--CCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRRL--PFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~L--PFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|. +.+++.|+++ ++ .+.+..+|.... |+| ++||+|+++.+++||.+.. ..+|+++.|+|||||+|++..
T Consensus 210 D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 210 DL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred eC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 66 6788888875 33 256777887664 787 8999999999999998765 348999999999999999977
Q ss_pred C
Q 009719 235 P 235 (527)
Q Consensus 235 p 235 (527)
+
T Consensus 288 ~ 288 (363)
T 3dp7_A 288 T 288 (363)
T ss_dssp C
T ss_pred e
Confidence 5
No 100
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.08 E-value=1.5e-05 Score=74.49 Aligned_cols=95 Identities=14% Similarity=0.105 Sum_probs=62.6
Q ss_pred cCcChHHHHHHHHHc----CCCcEEeeccccC-CCCCCCcccEEEecCcccccccC------------------hHHHHH
Q 009719 162 PRDSHKAQIQFALER----GIPAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAY------------------NATYLI 218 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~------------------~~~aL~ 218 (527)
..|.++.+++.|+++ ++.+.+.++|+.. .++++++||+|+|.-..++..+. ...+|.
T Consensus 84 ~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 163 (230)
T 3evz_A 84 ATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLE 163 (230)
T ss_dssp EEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHH
Confidence 336778888888754 5556777788643 46788999999998655443220 134899
Q ss_pred HHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEe
Q 009719 219 EVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELI 261 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~ 261 (527)
++.|+|||||++++..+.. ....+.+.++.+...|+..
T Consensus 164 ~~~~~LkpgG~l~~~~~~~-----~~~~~~~~~~l~~~g~~~~ 201 (230)
T 3evz_A 164 EAFDHLNPGGKVALYLPDK-----EKLLNVIKERGIKLGYSVK 201 (230)
T ss_dssp HHGGGEEEEEEEEEEEESC-----HHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhCCCeEEEEEeccc-----HhHHHHHHHHHHHcCCceE
Confidence 9999999999999976521 1223445555566566443
No 101
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.07 E-value=2.6e-06 Score=84.06 Aligned_cols=135 Identities=14% Similarity=0.125 Sum_probs=83.8
Q ss_pred eeEeecCCCccchhhhcc--CCCeeEEEecCCCCC-CchhHhhhc----ccc---c-cccccCCCCCCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALT--SDPVWVMNVVPARKS-STLSVIYDR----GLI---G-VYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~--~~~VwvMnvvp~~~~-ntl~vi~eR----GLi---G-~~hdwce~fstYPrtyDLiHa~~ 443 (527)
.+|||+|||.|.++.+|. ..+-. +|+-+|-. ..+..+-++ |+- - +..|..+ ++ ++.+||+|.+..
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~ 195 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGV--QLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK-LD-TREGYDLLTSNG 195 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTC--EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG-CC-CCSCEEEEECCS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCC--eEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc-CC-ccCCeEEEEECC
Confidence 479999999999999983 33221 22222322 333333332 331 1 1223222 22 458999999988
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC---------H------------------------------H
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS---------P------------------------------E 484 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~---------~------------------------------~ 484 (527)
++..+. +.-....+|-|+-|+|+|||.+++.+- . .
T Consensus 196 ~~~~~~------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (305)
T 3ocj_A 196 LNIYEP------DDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALR 269 (305)
T ss_dssp SGGGCC------CHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCC
T ss_pred hhhhcC------CHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccC
Confidence 887653 211223478999999999999999861 1 1
Q ss_pred HHHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 485 VIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 485 ~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
..++++++++.--++....... ....-..++++|+
T Consensus 270 ~~~~~~~~l~~aGF~~v~~~~~--~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 270 THAQTRAQLEEAGFTDLRFEDD--RARLFPTVIARKP 304 (305)
T ss_dssp CHHHHHHHHHHTTCEEEEEECC--TTSSSCEEEEECC
T ss_pred CHHHHHHHHHHCCCEEEEEEcc--cCceeeEEEEecC
Confidence 3667888888888887655432 2234467888885
No 102
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.06 E-value=5.7e-06 Score=77.16 Aligned_cols=115 Identities=17% Similarity=0.193 Sum_probs=70.0
Q ss_pred hhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-ccc-c
Q 009719 350 DSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-IGV-Y 422 (527)
Q Consensus 350 d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-iG~-~ 422 (527)
..+.|.+.+..+.... .. .-.+|||+|||.|.++..|.+...- |+-+|.. ..+..+-++ |+ +-. .
T Consensus 19 ~~~~~~~~~~~~l~~~---~~--~~~~vLdiG~G~G~~~~~l~~~~~~---~~~~D~s~~~~~~a~~~~~~~~~~~~~~~ 90 (246)
T 1y8c_A 19 DYKKWSDFIIEKCVEN---NL--VFDDYLDLACGTGNLTENLCPKFKN---TWAVDLSQEMLSEAENKFRSQGLKPRLAC 90 (246)
T ss_dssp CHHHHHHHHHHHHHTT---TC--CTTEEEEETCTTSTTHHHHGGGSSE---EEEECSCHHHHHHHHHHHHHTTCCCEEEC
T ss_pred cHHHHHHHHHHHHHHh---CC--CCCeEEEeCCCCCHHHHHHHHCCCc---EEEEECCHHHHHHHHHHHhhcCCCeEEEe
Confidence 3345555555544321 11 2358999999999999999877542 3333433 444444333 22 111 1
Q ss_pred cccCCCCCCCCCccchhhhcC-ccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 423 HDWCEPFSTYPRTYDLIHVSG-IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 423 hdwce~fstYPrtyDLiHa~~-~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.|.. .++ ++.+||+|.+.. +|.... +.=....+|-++-|+|+|||.+++.
T Consensus 91 ~d~~-~~~-~~~~fD~v~~~~~~l~~~~------~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 91 QDIS-NLN-INRKFDLITCCLDSTNYII------DSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CCGG-GCC-CSCCEEEEEECTTGGGGCC------SHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccc-cCC-ccCCceEEEEcCccccccC------CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1221 122 358999999987 777552 1123567899999999999999983
No 103
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.06 E-value=4e-06 Score=87.16 Aligned_cols=120 Identities=10% Similarity=0.049 Sum_probs=81.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCccccc----ccChH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPF----TAYNA 214 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw----~d~~~ 214 (527)
.|.++..|..++.. +...|.++.+++.|+++ ++.+.+..+|...+++++++||+|+|+-.+++- .+...
T Consensus 244 ~G~~~~~la~~g~~---V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~ 320 (381)
T 3dmg_A 244 YGALTLPLARMGAE---VVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQ 320 (381)
T ss_dssp TSTTHHHHHHTTCE---EEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHH
T ss_pred CCHHHHHHHHcCCE---EEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhcccccHHHHH
Confidence 55666666677653 33447888999888764 556778889999998888999999999877541 22233
Q ss_pred HHHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeeecceEEEeCC
Q 009719 215 TYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKP 273 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~iwrKp 273 (527)
.++.++.|+|||||+++++..+.. .+.. .+++... ..+.+ +.....|++..
T Consensus 321 ~~l~~~~~~LkpGG~l~iv~n~~l---~~~~--~l~~~f~--~v~~l-~~~gF~Vl~a~ 371 (381)
T 3dmg_A 321 AFVNVAAARLRPGGVFFLVSNPFL---KYEP--LLEEKFG--AFQTL-KVAEYKVLFAE 371 (381)
T ss_dssp HHHHHHHHHEEEEEEEEEEECTTS---CHHH--HHHHHHS--CCEEE-EESSSEEEEEE
T ss_pred HHHHHHHHhcCcCcEEEEEEcCCC---ChHH--HHHHhhc--cEEEE-eCCCEEEEEEE
Confidence 499999999999999999876422 2222 2333322 24455 55666666543
No 104
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.05 E-value=4.5e-07 Score=93.37 Aligned_cols=145 Identities=13% Similarity=0.082 Sum_probs=102.3
Q ss_pred ccchhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccccccccc
Q 009719 346 VFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIGVYHD 424 (527)
Q Consensus 346 ~f~~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~~hd 424 (527)
.|...+..|......+.+.+...+....=.+|||+|||.|.++..|.+... +|+-.|-. +.+..+-++|+-.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~ 156 (416)
T 4e2x_A 80 YHSSGSSVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDF 156 (416)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSC
T ss_pred CcCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceee
Confidence 355667789998888877666555544456899999999999999988765 44444544 77788888875332211
Q ss_pred cCC----CCCCC-CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH----------------
Q 009719 425 WCE----PFSTY-PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP---------------- 483 (527)
Q Consensus 425 wce----~fstY-PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~---------------- 483 (527)
+.. .++ + +.+||+|.+.++|.++. +...+|-|+-|+|+|||.+++....
T Consensus 157 ~~~~~~~~l~-~~~~~fD~I~~~~vl~h~~---------d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 226 (416)
T 4e2x_A 157 FEKATADDVR-RTEGPANVIYAANTLCHIP---------YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDE 226 (416)
T ss_dssp CSHHHHHHHH-HHHCCEEEEEEESCGGGCT---------THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTT
T ss_pred echhhHhhcc-cCCCCEEEEEECChHHhcC---------CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhh
Confidence 111 111 2 38999999999998763 3578999999999999999997421
Q ss_pred ----HHHHHHHHHHhcCCceeEEe
Q 009719 484 ----EVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 484 ----~~~~~i~~i~~~l~W~~~~~ 503 (527)
-..+.+++++++--+++...
T Consensus 227 ~~~~~s~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 227 HFFLFSATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp CCEECCHHHHHHHHHHTTEEEEEE
T ss_pred hhhcCCHHHHHHHHHHcCCEEEEE
Confidence 02356788888877776543
No 105
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.04 E-value=1.5e-06 Score=83.44 Aligned_cols=66 Identities=15% Similarity=0.069 Sum_probs=50.5
Q ss_pred HHHHHHHc----CC--CcEEeecc---ccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 169 QIQFALER----GI--PAFVAMLG---TRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 169 qvq~A~eR----g~--pa~~~v~d---ae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|++.|+++ ++ .+.+..+| ...+||++++||+|+|..+++|+.+... ++..+.++++|||+++++..
T Consensus 86 ~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 86 TLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANA-LALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp CHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHH-HHHHHHHHTTTCSEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHH-HHHHHHHHhCCCCEEEEEEe
Confidence 56666544 33 25566677 6788999999999999999999877655 66666777777999999775
No 106
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.03 E-value=1.1e-06 Score=86.90 Aligned_cols=98 Identities=11% Similarity=0.066 Sum_probs=64.9
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc----cccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
-.+|||+|||.|.++..|.+. +. +|+-+|-. ..+..+-++ |+-....-.+..+..+|.+||+|.+..+|..
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~~ 167 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEH 167 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred cCEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHHh
Confidence 357999999999999888755 43 23333332 555555444 4422111112222334689999999988875
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.. .-+...+|-|+-|+|+|||.+++.+
T Consensus 168 ~~-------~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 168 FG-------HENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp TC-------GGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cC-------HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 52 1235678999999999999999975
No 107
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.03 E-value=4.8e-07 Score=85.48 Aligned_cols=125 Identities=14% Similarity=0.116 Sum_probs=78.9
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----ccc-cccccCCCCCCCCCccchhhhc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----LIG-VYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----LiG-~~hdwce~fstYPrtyDLiHa~ 442 (527)
+....-.+|||+|||.|.++..|...... +|.-+|.. ..+..+-++- -+- +..|..+ ++.-+.+||+|.+.
T Consensus 89 l~~~~~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~ 165 (254)
T 1xtp_A 89 LPGHGTSRALDCGAGIGRITKNLLTKLYA--TTDLLEPVKHMLEEAKRELAGMPVGKFILASMET-ATLPPNTYDLIVIQ 165 (254)
T ss_dssp STTCCCSEEEEETCTTTHHHHHTHHHHCS--EEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGG-CCCCSSCEEEEEEE
T ss_pred hcccCCCEEEEECCCcCHHHHHHHHhhcC--EEEEEeCCHHHHHHHHHHhccCCceEEEEccHHH-CCCCCCCeEEEEEc
Confidence 33344568999999999999988655311 22222322 4445444442 111 2223322 33223799999999
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH----------------HHHHHHHHHHhcCCceeEEe
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP----------------EVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~----------------~~~~~i~~i~~~l~W~~~~~ 503 (527)
.++..+. .-....+|-|+-|+|+|||++++.+.. ...+.++++++..-++....
T Consensus 166 ~~l~~~~-------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 166 WTAIYLT-------DADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp SCGGGSC-------HHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred chhhhCC-------HHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 8887652 113467899999999999999998620 12467788887777876544
No 108
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.03 E-value=6.1e-06 Score=82.41 Aligned_cols=69 Identities=20% Similarity=0.193 Sum_probs=55.4
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|. +.+++.|+++ ++. +.+..+|.. .|+|. +||+|+|..++|||.++. ..+|+++.|+|||||+|++..+
T Consensus 200 D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 200 DL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp EC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 76 7788888754 442 567777775 56776 899999999999998763 3599999999999999999775
No 109
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.03 E-value=3e-06 Score=83.98 Aligned_cols=73 Identities=15% Similarity=0.154 Sum_probs=58.5
Q ss_pred ccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEe
Q 009719 161 APRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 161 Ap~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS 233 (527)
...|.+ .+++.|+++ ++. +.+..+|...+|++++ ||+|+|+.+++||.+.. ..+|+++.|+|||||++++.
T Consensus 193 ~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 193 FGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVF 270 (335)
T ss_dssp EEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 333777 888888765 443 5677788888888876 99999999999996553 35999999999999999998
Q ss_pred cC
Q 009719 234 GP 235 (527)
Q Consensus 234 ~p 235 (527)
.+
T Consensus 271 e~ 272 (335)
T 2r3s_A 271 DF 272 (335)
T ss_dssp EC
T ss_pred ee
Confidence 75
No 110
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.02 E-value=1.4e-06 Score=80.66 Aligned_cols=106 Identities=21% Similarity=0.294 Sum_probs=70.4
Q ss_pred hhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----ccccc-cccCCCCCCCCCccch
Q 009719 365 LNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----LIGVY-HDWCEPFSTYPRTYDL 438 (527)
Q Consensus 365 l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----LiG~~-hdwce~fstYPrtyDL 438 (527)
+...+....-.+|||+|||.|.++.+|.+.. -+|+-+|-. ..+..+-++. -+-.+ .|.. .++ .+.+||+
T Consensus 43 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~~-~~~~fD~ 117 (216)
T 3ofk_A 43 LRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDIL-QFS-TAELFDL 117 (216)
T ss_dssp HHHHTTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTT-TCC-CSCCEEE
T ss_pred HHHHcccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchh-hCC-CCCCccE
Confidence 3333555667899999999999999998774 245555543 4455554442 12222 2222 222 2489999
Q ss_pred hhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 439 IHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 439 iHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
|.+..++.... +.-.+..+|-|+-|+|+|||.+++.+
T Consensus 118 v~~~~~l~~~~------~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 118 IVVAEVLYYLE------DMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp EEEESCGGGSS------SHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEccHHHhCC------CHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 99998887654 22223467999999999999999964
No 111
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.02 E-value=2.8e-06 Score=77.75 Aligned_cols=94 Identities=18% Similarity=0.197 Sum_probs=63.5
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc---cc-cccccCCCCCCCCCccchhhhcCccc
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL---IG-VYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL---iG-~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
+|||+|||.|.++..|.+.+- .+|+-.|-. ..+..+-++ |+ +- +..|.. .++.-+.+||+|.+..++.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSD--FSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVH-NIPIEDNYADLIVSRGSVF 122 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSE--EEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTT-BCSSCTTCEEEEEEESCGG
T ss_pred EEEEECCCCCHHHHHHHHcCC--CeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHH-HCCCCcccccEEEECchHh
Confidence 899999999999999977632 233333432 445544444 43 11 222322 2232238999999998887
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+. +...+|-|+-|+|+|||.+++.+
T Consensus 123 ~~~---------~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 123 FWE---------DVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp GCS---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcc---------CHHHHHHHHHHhCCCCCEEEEEe
Confidence 653 24679999999999999999974
No 112
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.02 E-value=3.2e-07 Score=86.94 Aligned_cols=95 Identities=14% Similarity=0.201 Sum_probs=65.1
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccccccc-cccCCCCCCCC-CccchhhhcCccccccCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIGVY-HDWCEPFSTYP-RTYDLIHVSGIESLIKNP 451 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~~-hdwce~fstYP-rtyDLiHa~~~fs~~~~~ 451 (527)
.+|||+|||.|.|+.+|.+...-| +-+|-. ..+..+-++ +-.. .|-.+....+| .+||+|.+..++....
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~v---~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~-- 115 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGIES---IGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLD-- 115 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTCCE---EEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSC--
T ss_pred CeEEEEeCCCCHHHHHHHhCCCcE---EEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhCC--
Confidence 589999999999999987765433 333433 566666665 2221 12111111234 8999999998888653
Q ss_pred CCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 452 GSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 452 ~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.-.+..+|-|+-|+|+|||++++..
T Consensus 116 -----~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 116 -----PERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp -----GGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred -----cHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 2235689999999999999999974
No 113
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.00 E-value=3.4e-06 Score=78.76 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc--ccccccccCCC
Q 009719 352 RRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG--LIGVYHDWCEP 428 (527)
Q Consensus 352 ~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG--LiG~~hdwce~ 428 (527)
..|...++.+.+.+...+. .-.+|||+|||.|.++..|.+..- +|.-.|.. ..+..+-++. +--+..|.. .
T Consensus 21 ~~~~~~~~~~~~~l~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~-~ 94 (239)
T 3bxo_A 21 KDYAAEASDIADLVRSRTP--EASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMR-D 94 (239)
T ss_dssp CCHHHHHHHHHHHHHHHCT--TCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTT-T
T ss_pred hhHHHHHHHHHHHHHHhcC--CCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHH-H
Confidence 3455555555555554342 236899999999999998866532 33333433 4455554442 111122322 2
Q ss_pred CCCCCCccchhhhcC-ccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 429 FSTYPRTYDLIHVSG-IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 429 fstYPrtyDLiHa~~-~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
++ ++.+||+|.|.. ++.... +.-....+|-++-|+|+|||.+++.+
T Consensus 95 ~~-~~~~~D~v~~~~~~~~~~~------~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 95 FR-LGRKFSAVVSMFSSVGYLK------TTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CC-CSSCEEEEEECTTGGGGCC------SHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cc-cCCCCcEEEEcCchHhhcC------CHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 23 268999999643 555432 11234678999999999999999973
No 114
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.00 E-value=4.9e-06 Score=76.82 Aligned_cols=84 Identities=13% Similarity=-0.031 Sum_probs=62.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
.|.++..|...+..+..+ |.++.+++.|+++ +.+ ..+..+|....+.++++||+|++..+++|+.+
T Consensus 88 ~G~~~~~la~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~------ 158 (210)
T 3lbf_A 88 SGYQTAILAHLVQHVCSV---ERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPT------ 158 (210)
T ss_dssp TSHHHHHHHHHSSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCSSCCT------
T ss_pred CCHHHHHHHHhCCEEEEE---ecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchhhhhH------
Confidence 344444555554433333 7778888888765 443 56777888888888899999999998877664
Q ss_pred HHHhhcccCCcEEEEecCC
Q 009719 218 IEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp 236 (527)
++.|+|||||+++++.++
T Consensus 159 -~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 159 -ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp -HHHHTEEEEEEEEEEECS
T ss_pred -HHHHhcccCcEEEEEEcC
Confidence 688999999999999874
No 115
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.00 E-value=5.4e-06 Score=81.87 Aligned_cols=73 Identities=12% Similarity=-0.003 Sum_probs=56.0
Q ss_pred cChHHHHHHHHHcC---CCcEEeeccccCCC-----------CCCCcccEEEecCcccccccC-hHHHHHHHhhcccCCc
Q 009719 164 DSHKAQIQFALERG---IPAFVAMLGTRRLP-----------FPAFSFDIVHCSRCLIPFTAY-NATYLIEVDRLLRPGG 228 (527)
Q Consensus 164 D~seaqvq~A~eRg---~pa~~~v~dae~LP-----------FpD~SFDlV~cs~~l~hw~d~-~~~aL~Ei~RVLRPGG 228 (527)
|.++.|++.|+++. ..+.+..+|...++ |+..+||+|++..+++|+++. ...+|+|+.|+|||||
T Consensus 111 D~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG 190 (274)
T 2qe6_A 111 DIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGS 190 (274)
T ss_dssp ESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTC
T ss_pred ECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCc
Confidence 77889999998763 23566777764321 333589999999999888774 3459999999999999
Q ss_pred EEEEecCC
Q 009719 229 YLVISGPP 236 (527)
Q Consensus 229 ~lviS~pp 236 (527)
+|+++...
T Consensus 191 ~l~i~~~~ 198 (274)
T 2qe6_A 191 YLFMTSLV 198 (274)
T ss_dssp EEEEEEEB
T ss_pred EEEEEEec
Confidence 99998763
No 116
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.99 E-value=3.5e-06 Score=76.25 Aligned_cols=146 Identities=14% Similarity=0.059 Sum_probs=79.4
Q ss_pred cCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc--cccccccCCCCCCC-CCccchhh
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL--IGVYHDWCEPFSTY-PRTYDLIH 440 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL--iG~~hdwce~fstY-PrtyDLiH 440 (527)
+..+ ..|||+|||.|.++..|.+...-|. -.|-. ..+..+-+ .|+ +-+.++-.+.+..+ +.+||+|.
T Consensus 20 ~~~~--~~vLDiGcG~G~~~~~la~~~~~v~---~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~ 94 (185)
T 3mti_A 20 LDDE--SIVVDATMGNGNDTAFLAGLSKKVY---AFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAI 94 (185)
T ss_dssp CCTT--CEEEESCCTTSHHHHHHHTTSSEEE---EEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEE
T ss_pred CCCC--CEEEEEcCCCCHHHHHHHHhCCEEE---EEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEE
Confidence 4444 4799999999999999987743333 33322 33443333 344 33333333343323 47899996
Q ss_pred hc-CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC------CHHHHHHHHHHHhcCC---ceeEEecCCCCCC
Q 009719 441 VS-GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD------SPEVIDKVSRIANTVR---WTAAVHDKEPGSN 510 (527)
Q Consensus 441 a~-~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird------~~~~~~~i~~i~~~l~---W~~~~~~~e~~~~ 510 (527)
++ +.+..-. .......-.....|-|+-|+|+|||.+++.. ..+..+.+.+.+..+. |.+.....-+...
T Consensus 95 ~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 173 (185)
T 3mti_A 95 FNLGYLPSAD-KSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQIN 173 (185)
T ss_dssp EEEC------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSS
T ss_pred EeCCCCCCcc-hhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCC
Confidence 65 2211100 0000000011356788999999999998863 1234455666666555 7766554433334
Q ss_pred CCceEEEEEe
Q 009719 511 GREKILVATK 520 (527)
Q Consensus 511 ~~ekiLi~~K 520 (527)
.+..+++..|
T Consensus 174 ~~~~~~~i~~ 183 (185)
T 3mti_A 174 TPPFLVMLEK 183 (185)
T ss_dssp CCCEEEEEEE
T ss_pred CCCeEEEEEe
Confidence 4556666666
No 117
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.99 E-value=3.4e-06 Score=77.15 Aligned_cols=143 Identities=12% Similarity=0.024 Sum_probs=88.0
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhc----cc---cccc-cccCCCCC-CCCCcc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDR----GL---IGVY-HDWCEPFS-TYPRTY 436 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eR----GL---iG~~-hdwce~fs-tYPrty 436 (527)
+..+ .+|||+|||.|.++.+|.+. +-- +|+-.|.. ..+..+-++ |+ +-+. .|. +.+. ..+.+|
T Consensus 20 ~~~~--~~vLDlGcG~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~f 94 (197)
T 3eey_A 20 VKEG--DTVVDATCGNGNDTAFLASLVGENG--RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH-QNMDKYIDCPV 94 (197)
T ss_dssp CCTT--CEEEESCCTTSHHHHHHHHHHCTTC--EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG-GGGGGTCCSCE
T ss_pred CCCC--CEEEEcCCCCCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH-HHHhhhccCCc
Confidence 4444 38999999999999888654 211 33334433 444444333 33 2222 222 2233 234899
Q ss_pred chhhhcCccccccCCCCCCCCC------cccccceeecccccCCcEEEEeC------CHHHHHHHHHHHhcCC---ceeE
Q 009719 437 DLIHVSGIESLIKNPGSNKNSC------SLVDLMVEMDRMLRPEGTVVVRD------SPEVIDKVSRIANTVR---WTAA 501 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC------~~~~illEmDRILRP~G~~iird------~~~~~~~i~~i~~~l~---W~~~ 501 (527)
|+|-++..+-.. .+.. ....++-++-|+|+|||.+++.. ..+....+.+.++.+. |++.
T Consensus 95 D~v~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~ 168 (197)
T 3eey_A 95 KAVMFNLGYLPS------GDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQ 168 (197)
T ss_dssp EEEEEEESBCTT------SCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEE
T ss_pred eEEEEcCCcccC------cccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEE
Confidence 999987555111 1111 12358999999999999999874 2234556666666654 8887
Q ss_pred EecCCCCCCCCceEEEEEecc
Q 009719 502 VHDKEPGSNGREKILVATKSL 522 (527)
Q Consensus 502 ~~~~e~~~~~~ekiLi~~K~~ 522 (527)
....-+....+..++|.+|..
T Consensus 169 ~~~~~~~~~~pp~~~~~~~~~ 189 (197)
T 3eey_A 169 RTDFINQANCPPILVCIEKIS 189 (197)
T ss_dssp EEEETTCCSCCCEEEEEEECC
T ss_pred EEEeccCccCCCeEEEEEEcc
Confidence 776666666678888888864
No 118
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.99 E-value=1.2e-05 Score=74.10 Aligned_cols=106 Identities=12% Similarity=0.072 Sum_probs=69.8
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
|.++..|...+.. .+...|.++.+++.|+++ +.. ..+..+|.. ++.+++||+|+|...++++ ..++.
T Consensus 72 G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~--~~~~~~fD~i~~~~~~~~~----~~~l~ 143 (205)
T 3grz_A 72 GILAIAAHKLGAK--SVLATDISDESMTAAEENAALNGIYDIALQKTSLL--ADVDGKFDLIVANILAEIL----LDLIP 143 (205)
T ss_dssp SHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTT--TTCCSCEEEEEEESCHHHH----HHHGG
T ss_pred CHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEecccc--ccCCCCceEEEECCcHHHH----HHHHH
Confidence 4444455554431 233337788888888765 544 566666764 4567999999998876543 34899
Q ss_pred HHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeee
Q 009719 219 EVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAV 263 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~ 263 (527)
++.|+|||||++++++... ...+.+.++.+...++.+..
T Consensus 144 ~~~~~L~~gG~l~~~~~~~------~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 144 QLDSHLNEDGQVIFSGIDY------LQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp GSGGGEEEEEEEEEEEEEG------GGHHHHHHHHHHTTEEEEEE
T ss_pred HHHHhcCCCCEEEEEecCc------ccHHHHHHHHHHcCCceEEe
Confidence 9999999999999986421 12344555666666766543
No 119
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.99 E-value=6.3e-06 Score=83.73 Aligned_cols=66 Identities=8% Similarity=0.120 Sum_probs=52.2
Q ss_pred cChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.+++|++.|+++ |+ .+.+.++|+..+| +++||+|++... ..+ ...++.|+.|+|||||+|++...
T Consensus 153 Dis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d-~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 153 EIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL---AEP-KRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT---CSC-HHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC---ccC-HHHHHHHHHHHcCCCcEEEEEcC
Confidence 7788999999865 55 3567788888876 899999997644 233 33499999999999999999764
No 120
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.99 E-value=9.7e-06 Score=74.69 Aligned_cols=115 Identities=16% Similarity=0.225 Sum_probs=74.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cccccccccCCCCCCCCCccchhhhcCcccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
.+|||+|||.|.++.+|.+.+.- +|+-.|.. ..+..+-++ |+-.+----...+...+.+||+|.++..+..
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~-- 137 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGAK--SVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEI-- 137 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHH--
T ss_pred CEEEEECCCCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHH--
Confidence 58999999999999998776531 23333332 444444433 4322111111222233589999999766543
Q ss_pred CCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCceeEEe
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~~~~~ 503 (527)
+..+|-++-|+|+|||.+++.+ ..+....+.++++...++....
T Consensus 138 ----------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 138 ----------LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp ----------HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEE
T ss_pred ----------HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEe
Confidence 3568999999999999999975 3345667777777777776543
No 121
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.98 E-value=8.4e-07 Score=81.55 Aligned_cols=95 Identities=16% Similarity=0.173 Sum_probs=65.2
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcccccc---ccccCCCCCCCCCccchhhhcCccccccC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIGV---YHDWCEPFSTYPRTYDLIHVSGIESLIKN 450 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~---~hdwce~fstYPrtyDLiHa~~~fs~~~~ 450 (527)
.+|||+|||.|.++.+|.+... +|+-.|-. ..+..+-++|+..+ ..|..+. .-+.+||+|.+..++....
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~l~~~~- 121 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW--TPDRQWDAVFFAHWLAHVP- 121 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC--CCSSCEEEEEEESCGGGSC-
T ss_pred CeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC--CCCCceeEEEEechhhcCC-
Confidence 4899999999999999977643 23333332 55666666663221 2222222 1248999999998887653
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.-.+..+|-|+-|+|+|||.+++.+
T Consensus 122 ------~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 122 ------DDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp ------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------HHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 1224678999999999999999984
No 122
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.97 E-value=3.6e-06 Score=80.33 Aligned_cols=71 Identities=17% Similarity=0.204 Sum_probs=54.6
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCC-C--CCCCcccEEEecCcccccccChH--------HHHHHHhhcccCC
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRL-P--FPAFSFDIVHCSRCLIPFTAYNA--------TYLIEVDRLLRPG 227 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~L-P--FpD~SFDlV~cs~~l~hw~d~~~--------~aL~Ei~RVLRPG 227 (527)
|.++.+++.|+++ ++. +.+..+|+..+ + |++++||.|++... .+|+.... .++.++.|+||||
T Consensus 65 D~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpG 143 (218)
T 3dxy_A 65 EVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFP-DPWHKARHNKRRIVQVPFAELVKSKLQLG 143 (218)
T ss_dssp CSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESC-CCCCSGGGGGGSSCSHHHHHHHHHHEEEE
T ss_pred EecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCC-CCccchhhhhhhhhhHHHHHHHHHHcCCC
Confidence 6778888877654 543 56777888774 5 89999999998765 35654332 3999999999999
Q ss_pred cEEEEecC
Q 009719 228 GYLVISGP 235 (527)
Q Consensus 228 G~lviS~p 235 (527)
|+|++++.
T Consensus 144 G~l~i~td 151 (218)
T 3dxy_A 144 GVFHMATD 151 (218)
T ss_dssp EEEEEEES
T ss_pred cEEEEEeC
Confidence 99999875
No 123
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=97.97 E-value=1.2e-06 Score=86.08 Aligned_cols=94 Identities=15% Similarity=0.069 Sum_probs=60.8
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhhccccccccccCCCCCCCCCccchhhhcCccccccCCCCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSN 454 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~ 454 (527)
.+|||+|||.|.++..|.+.--=|.-|=|. +..|..+-++.=|-..+.=-|.++.-+.+||+|.|..+| +|.
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s--~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~----- 112 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFERVHAVDPG--EAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWF----- 112 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCSEEEEEESC--HHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCC-TTC-----
T ss_pred CCEEEEcCCCCHHHHHHHHhCCEEEEEeCc--HHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeeh-hHh-----
Confidence 479999999999999998765333333222 133433333321222222224444223899999999888 453
Q ss_pred CCCCcccccceeecccccCCcEEEEe
Q 009719 455 KNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 455 ~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+....+-|+-|+|||||.+++-
T Consensus 113 ----~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 113 ----DLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp ----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----hHHHHHHHHHHHcCCCCEEEEE
Confidence 2467899999999999999775
No 124
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.97 E-value=5.2e-06 Score=75.88 Aligned_cols=92 Identities=15% Similarity=0.061 Sum_probs=63.9
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccCCC--CCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLP--FPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LP--FpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
+|.++..++.++.. .+...|.++.+++.|+++ ++ .+.+.++|+..++ +++++||+|+|...+++..+....
T Consensus 55 ~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~ 132 (189)
T 3p9n_A 55 SGALGLEALSRGAA--SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDA 132 (189)
T ss_dssp TCHHHHHHHHTTCS--EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHH
T ss_pred cCHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHH
Confidence 44455545555532 223337778888888764 44 3567788877764 568999999998776543233445
Q ss_pred HHHHHhh--cccCCcEEEEecCC
Q 009719 216 YLIEVDR--LLRPGGYLVISGPP 236 (527)
Q Consensus 216 aL~Ei~R--VLRPGG~lviS~pp 236 (527)
++.++.| +|||||++++..+.
T Consensus 133 ~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 133 ILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HHHHHHHSSSCCTTCEEEEEEET
T ss_pred HHHHHHhcCccCCCeEEEEEecC
Confidence 9999999 99999999998753
No 125
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.96 E-value=1.7e-06 Score=81.17 Aligned_cols=115 Identities=11% Similarity=0.074 Sum_probs=77.4
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccc---c-ccccccCCCCCCCCCccchhhhcCcccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGL---I-GVYHDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGL---i-G~~hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
.+|||+|||.|.++.+|.....-| +-+|-. ..+..+-+++. + -+..|.. .++.-+.+||+|.+..++.+..
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGYKA---VGVDISEVMIQKGKERGEGPDLSFIKGDLS-SLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEE---EEEESCHHHHHHHHTTTCBTTEEEEECBTT-BCSSCTTCEEEEEEESCTTSSS
T ss_pred CeEEEEcCCCCHHHHHHHHcCCeE---EEEECCHHHHHHHHhhcccCCceEEEcchh-cCCCCCCCccEEEEcChHhhcc
Confidence 489999999999999998775433 333333 55666666632 1 1122222 2332248999999998887653
Q ss_pred CCCCCCCCCcccccceeecccccCCcEEEEeCCH----------------------HHHHHHHHHHhcCCceeEE
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP----------------------EVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~iird~~----------------------~~~~~i~~i~~~l~W~~~~ 502 (527)
+...+|-|+-|+|+|||.+++.+.. -....++++++..-+++..
T Consensus 131 ---------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 196 (242)
T 3l8d_A 131 ---------EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVD 196 (242)
T ss_dssp ---------CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEE
T ss_pred ---------CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEE
Confidence 2357899999999999999997410 1134677888888887654
No 126
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.94 E-value=1.1e-06 Score=85.22 Aligned_cols=102 Identities=14% Similarity=0.176 Sum_probs=66.0
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----ccc-------cccccCCCCC---CCCCccch
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----LIG-------VYHDWCEPFS---TYPRTYDL 438 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----LiG-------~~hdwce~fs---tYPrtyDL 438 (527)
-.+|||+|||.|.++..|.+... +|+-+|-. ..+..+-++. .-+ ...|+.+ ++ .-+.+||+
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~fD~ 133 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT-LDKDVPAGDGFDA 133 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG-HHHHSCCTTCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh-CccccccCCCeEE
Confidence 35899999999999999987765 55555544 5566554431 111 1112211 11 12479999
Q ss_pred hhhc-CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 439 IHVS-GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 439 iHa~-~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
|+|. .+|.++.+ ...+.-....+|-|+-|+|+|||++++..
T Consensus 134 V~~~g~~l~~~~~--~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 134 VICLGNSFAHLPD--SKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EEECTTCGGGSCC--SSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEcChHHhhcCc--cccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 9997 67765530 00012235679999999999999999985
No 127
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.94 E-value=3.1e-06 Score=79.02 Aligned_cols=118 Identities=12% Similarity=0.056 Sum_probs=74.2
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC---CcEEeeccccCC-CC-CCCc-ccEEEecCcccccccC
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI---PAFVAMLGTRRL-PF-PAFS-FDIVHCSRCLIPFTAY 212 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~---pa~~~v~dae~L-PF-pD~S-FDlV~cs~~l~hw~d~ 212 (527)
+|.++..++.++.. .+...|.++.+++.|+++ ++ .+.+..+|+..+ +. ++++ ||+|++...+ |..+.
T Consensus 64 tG~~~~~~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~-~~~~~ 140 (201)
T 2ift_A 64 SGSLGFEALSRQAK--KVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPF-HFNLA 140 (201)
T ss_dssp TCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCCS-SSCHH
T ss_pred cCHHHHHHHHccCC--EEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCCC-CCccH
Confidence 45555555666542 233347888999988764 44 356777887664 33 4789 9999998764 43333
Q ss_pred hHHHHHHH--hhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeee----ecceEEEeCCCcc
Q 009719 213 NATYLIEV--DRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAV----DGNTVIWKKPVGE 276 (527)
Q Consensus 213 ~~~aL~Ei--~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~----~~~v~iwrKp~~~ 276 (527)
..++.++ .|+|||||+++++..+........ .|..+.+ ...+.+|++..++
T Consensus 141 -~~~l~~~~~~~~LkpgG~l~i~~~~~~~~~~~~------------~~~~~~~~~yG~~~~~~~~~~~~~ 197 (201)
T 2ift_A 141 -EQAISLLCENNWLKPNALIYVETEKDKPLITPE------------NWTLLKEKTTGIVSYRLYQNLEHH 197 (201)
T ss_dssp -HHHHHHHHHTTCEEEEEEEEEEEESSSCCCCCT------------TEEEEEEEEETTEEEEEEEECC--
T ss_pred -HHHHHHHHhcCccCCCcEEEEEECCCCCccccc------------hhHHHHHHhcCCEEEEEEecchhc
Confidence 3488999 889999999999876443211111 2554433 2347788877764
No 128
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.93 E-value=1.6e-05 Score=74.70 Aligned_cols=117 Identities=16% Similarity=0.120 Sum_probs=77.8
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cccc----cccccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLIG----VYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLiG----~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|||+|||.|.++..|.....-|.. +|-. ..+..+-++ |+.. +..|..+ ++ .+.+||+|.+..+|
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~g---vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~l 142 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVG---LDISESALAKANETYGSSPKAEYFSFVKEDVFT-WR-PTELFDLIFDYVFF 142 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEE---ECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTT-CC-CSSCEEEEEEESST
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEE---EECCHHHHHHHHHHhhccCCCcceEEEECchhc-CC-CCCCeeEEEEChhh
Confidence 48999999999999999876554433 3332 444444333 2211 1223222 11 23689999998888
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH-----------HHHHHHHHHHhcCCceeEEe
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-----------EVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~-----------~~~~~i~~i~~~l~W~~~~~ 503 (527)
..+. .-....+|-|+-|+|+|||++++.+-. -..+.++++++..-|+....
T Consensus 143 ~~~~-------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 143 CAIE-------PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp TTSC-------GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred hcCC-------HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEE
Confidence 7552 234567899999999999999985310 13577888888888887644
No 129
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.93 E-value=1.9e-05 Score=74.84 Aligned_cols=66 Identities=14% Similarity=0.111 Sum_probs=53.6
Q ss_pred cChHHHHHHHHHc-----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER-----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR-----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.+++.|+++ |. ...+..+|...+|+++++||+|++ ++++... +|.++.|+|||||++++..+
T Consensus 128 D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~-----~~~~~~~-~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 128 EARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVAL-----DLMEPWK-VLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp ESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEE-----ESSCGGG-GHHHHHHHEEEEEEEEEEES
T ss_pred eCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEE-----CCcCHHH-HHHHHHHhCCCCCEEEEEeC
Confidence 6678888888765 53 356777888888999999999997 3444444 99999999999999999987
No 130
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=97.93 E-value=5.2e-06 Score=82.65 Aligned_cols=54 Identities=15% Similarity=0.036 Sum_probs=45.4
Q ss_pred cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 180 AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+..+|... |++ ++||+|+|..+++||.+.. ..+|+++.|+|||||++++...
T Consensus 219 v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 219 VSLVGGDMLQ-EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp EEEEESCTTT-CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred EEEecCCCCC-CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 5667777766 676 7899999999999997765 2499999999999999999865
No 131
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.93 E-value=2e-06 Score=83.80 Aligned_cols=95 Identities=22% Similarity=0.297 Sum_probs=64.2
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----ccc---ccc-ccccCCCCCCCCCccchhhhcC
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGL---IGV-YHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGL---iG~-~hdwce~fstYPrtyDLiHa~~ 443 (527)
-.+|||+|||.|.++..|.+. +. +|+-+|-. ..+..+-+ .|+ +-+ ..|.. .++.-+.+||+|.+..
T Consensus 83 ~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 83 QAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EIPCEDNSYDFIWSQD 158 (297)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SCSSCTTCEEEEEEES
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc-cCCCCCCCEeEEEecc
Confidence 458999999999999988765 43 33333333 44444433 343 211 22322 2231137999999998
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
++.++. + ...+|-|+-|+|+|||.+++.+
T Consensus 159 ~l~~~~------~---~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 159 AFLHSP------D---KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp CGGGCS------C---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhcC------C---HHHHHHHHHHHcCCCeEEEEEE
Confidence 888764 2 5789999999999999999985
No 132
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.93 E-value=5.6e-05 Score=69.66 Aligned_cols=103 Identities=12% Similarity=-0.065 Sum_probs=67.3
Q ss_pred hccccccccCC--eeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 144 ASFGGSMLSEN--ILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 144 gsfga~Ll~r~--V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
|.++..|..++ ..+. ..|.++.+++.|+++ +++ ..+..+|.........+||+|++...+. ....+
T Consensus 52 G~~~~~la~~~~~~~v~---~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~----~~~~~ 124 (204)
T 3e05_A 52 ASVSIEASNLMPNGRIF---ALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGG----MLEEI 124 (204)
T ss_dssp CHHHHHHHHHCTTSEEE---EEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCTT----CHHHH
T ss_pred CHHHHHHHHHCCCCEEE---EEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCCc----CHHHH
Confidence 44444555544 3222 336678888888764 443 5566777755444457899999987763 33349
Q ss_pred HHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceE
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYE 259 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~ 259 (527)
+.++.|+|||||+++++.+. ....+.+.+..+...|+
T Consensus 125 l~~~~~~LkpgG~l~~~~~~------~~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 125 IDAVDRRLKSEGVIVLNAVT------LDTLTKAVEFLEDHGYM 161 (204)
T ss_dssp HHHHHHHCCTTCEEEEEECB------HHHHHHHHHHHHHTTCE
T ss_pred HHHHHHhcCCCeEEEEEecc------cccHHHHHHHHHHCCCc
Confidence 99999999999999998762 12344455555666663
No 133
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=97.92 E-value=7.5e-06 Score=82.65 Aligned_cols=69 Identities=28% Similarity=0.335 Sum_probs=53.8
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|. +.+++.|+++ ++. +.+..+|... ++|.+ ||+|+|+.+++||.+.. ..+|+++.|+|||||++++...
T Consensus 213 D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 213 EL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPVT-ADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCC-CCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 66 7788888764 443 5667777644 45543 99999999999998765 2499999999999999999765
No 134
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=97.92 E-value=6.4e-06 Score=73.39 Aligned_cols=127 Identities=13% Similarity=0.080 Sum_probs=83.0
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc--cccccccccCCCCCCCCCccchhhhcCccccccC
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR--GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKN 450 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR--GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~ 450 (527)
-.+|||+|||.|.++.+|.+..- +|.-.|-. ..+..+-++ .+--...| .+| -..+||+|.+..++....
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~--~~~~~D~v~~~~~l~~~~- 89 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFAT---KLYCIDINVIALKEVKEKFDSVITLSDP--KEI--PDNSVDFILFANSFHDMD- 89 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEE---EEEEECSCHHHHHHHHHHCTTSEEESSG--GGS--CTTCEEEEEEESCSTTCS-
T ss_pred CCeEEEECCCCCHHHHHHHhhcC---eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCC--CCCceEEEEEccchhccc-
Confidence 46899999999999999987752 55555544 556666555 12112223 222 237999999998887553
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEeCCH-------------HHHHHHHHHHhcCCceeEEecCCCCCCCCceEEE
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-------------EVIDKVSRIANTVRWTAAVHDKEPGSNGREKILV 517 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iird~~-------------~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi 517 (527)
+...+|-|+-|+|+|||.+++.+-. -..++++++++ .|+......- + ...-.++
T Consensus 90 --------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~-~--~~~~~l~ 156 (170)
T 3i9f_A 90 --------DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNP-T--PYHFGLV 156 (170)
T ss_dssp --------CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECS-S--TTEEEEE
T ss_pred --------CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCC-C--CceEEEE
Confidence 3468899999999999999998410 02456667666 6665433211 1 2345777
Q ss_pred EEec
Q 009719 518 ATKS 521 (527)
Q Consensus 518 ~~K~ 521 (527)
+.|+
T Consensus 157 ~~~~ 160 (170)
T 3i9f_A 157 LKRK 160 (170)
T ss_dssp EEEC
T ss_pred EecC
Confidence 7764
No 135
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.91 E-value=1.5e-05 Score=73.69 Aligned_cols=132 Identities=14% Similarity=0.133 Sum_probs=83.6
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc---cccccccccCCCCCCCCCccchhhhcCcccccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR---GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR---GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
-.+|||+|||.|.++..|.+...- |+-+|.. ..+..+-++ ++-=+..|..+ ++ ++.+||+|.+..++....
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLAGRT---VYGIEPSREMRMIAKEKLPKEFSITEGDFLS-FE-VPTSIDTIVSTYAFHHLT 120 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHTTCE---EEEECSCHHHHHHHHHHSCTTCCEESCCSSS-CC-CCSCCSEEEEESCGGGSC
T ss_pred CCeEEEeCCCCCHHHHHHHhCCCe---EEEEeCCHHHHHHHHHhCCCceEEEeCChhh-cC-CCCCeEEEEECcchhcCC
Confidence 458999999999999999877543 3333433 444544444 22112222222 22 338999999998887654
Q ss_pred CCCCCCCCCcccccceeecccccCCcEEEEeCC----HH---------------------------HHHHHHHHHhcCCc
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS----PE---------------------------VIDKVSRIANTVRW 498 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~iird~----~~---------------------------~~~~i~~i~~~l~W 498 (527)
+ =....+|-|+-|+|+|||.+++.+. .. ..+.++++++.--+
T Consensus 121 ------~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 193 (220)
T 3hnr_A 121 ------D-DEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGF 193 (220)
T ss_dssp ------H-HHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTE
T ss_pred ------h-HHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCC
Confidence 1 0112389999999999999999851 11 12567788888888
Q ss_pred eeEEecCCCCCCCCceEEEEEec
Q 009719 499 TAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 499 ~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
++...... +-.=++.++|+
T Consensus 194 ~v~~~~~~----~~~w~~~~~~~ 212 (220)
T 3hnr_A 194 HVTFTRLN----HFVWVMEATKQ 212 (220)
T ss_dssp EEEEEECS----SSEEEEEEEEC
T ss_pred EEEEeecc----ceEEEEeehhh
Confidence 77665432 23346666664
No 136
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=97.91 E-value=1.3e-05 Score=81.93 Aligned_cols=69 Identities=13% Similarity=0.132 Sum_probs=55.5
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChH-HHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPGG~lviS~p 235 (527)
|. +.+++.|+++ ++ .+.+..+|.. .|+|+ .||+|+|..+++||.+... .+|+++.|+|||||+|++...
T Consensus 233 D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 233 ER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp EC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred cC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 66 6788877754 43 2567777776 67887 8999999999999987652 599999999999999999764
No 137
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.91 E-value=9.1e-06 Score=72.75 Aligned_cols=136 Identities=15% Similarity=0.071 Sum_probs=80.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc--ccccccccCCCCCCCCCccchhhhc-CccccccC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG--LIGVYHDWCEPFSTYPRTYDLIHVS-GIESLIKN 450 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG--LiG~~hdwce~fstYPrtyDLiHa~-~~fs~~~~ 450 (527)
.+|||+|||.|.++..|.....- |+-.+.. ..+..+-++. +--+..|..+ ++.-+.+||+|.+. .++....
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~~---v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~~- 122 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGHD---VLGTDLDPILIDYAKQDFPEARWVVGDLSV-DQISETDFDLIVSAGNVMGFLA- 122 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTCE---EEEEESCHHHHHHHHHHCTTSEEEECCTTT-SCCCCCCEEEEEECCCCGGGSC-
T ss_pred CeEEEECCCCCHHHHHHHHCCCc---EEEEcCCHHHHHHHHHhCCCCcEEEccccc-CCCCCCceeEEEECCcHHhhcC-
Confidence 48999999999999999776543 3333332 3344333331 1111223222 22113789999997 5555431
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEeCCH---HHHHHHHHHHhcCCceeEEecCC--CC---CCCCceEEEEEec
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP---EVIDKVSRIANTVRWTAAVHDKE--PG---SNGREKILVATKS 521 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iird~~---~~~~~i~~i~~~l~W~~~~~~~e--~~---~~~~ekiLi~~K~ 521 (527)
.=....+|-++-|+|+|||.+++.... ....++.++++...+++...... .. ....--+++++|+
T Consensus 123 ------~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 123 ------EDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp ------HHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred ------hHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 112367889999999999999996432 23567777777777776544211 11 1223446777774
No 138
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.90 E-value=9.2e-06 Score=82.11 Aligned_cols=86 Identities=19% Similarity=0.194 Sum_probs=56.5
Q ss_pred hhccccccccCCe-eEEeeccCcChHHHHHHHHHcCCCcEE-eeccccCCC---CCCCcccEEEecCcccccccChHHHH
Q 009719 143 VASFGGSMLSENI-LTLSFAPRDSHKAQIQFALERGIPAFV-AMLGTRRLP---FPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V-~~msiAp~D~seaqvq~A~eRg~pa~~-~v~dae~LP---FpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
+|.|+..|+.++. .+..+ |.++.|++.++++...+.. ...+...++ ++..+||+|+|..++++. . .+|
T Consensus 96 TG~~t~~L~~~ga~~V~aV---Dvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl---~-~vL 168 (291)
T 3hp7_A 96 TGGFTDVMLQNGAKLVYAV---DVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISL---N-LIL 168 (291)
T ss_dssp TSHHHHHHHHTTCSEEEEE---CSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCG---G-GTH
T ss_pred ccHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhhH---H-HHH
Confidence 6777777777764 23333 6666777776654322221 122333333 345679999999887654 3 499
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
.|+.|+|||||+|++...
T Consensus 169 ~e~~rvLkpGG~lv~lvk 186 (291)
T 3hp7_A 169 PALAKILVDGGQVVALVK 186 (291)
T ss_dssp HHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHcCcCCEEEEEEC
Confidence 999999999999999744
No 139
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.90 E-value=2.2e-05 Score=71.72 Aligned_cols=74 Identities=14% Similarity=0.125 Sum_probs=55.5
Q ss_pred cCcChHHHHHHHHHc----CC--CcEEeeccccCCC-CCCCcccEEEecCccccccc--------ChHHHHHHHhhcccC
Q 009719 162 PRDSHKAQIQFALER----GI--PAFVAMLGTRRLP-FPAFSFDIVHCSRCLIPFTA--------YNATYLIEVDRLLRP 226 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~--pa~~~v~dae~LP-FpD~SFDlV~cs~~l~hw~d--------~~~~aL~Ei~RVLRP 226 (527)
..|.++.+++.|+++ ++ .+.+..+|++.++ +.+++||+|++...+.+..+ ....++.++.|+|||
T Consensus 52 ~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~ 131 (197)
T 3eey_A 52 GFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVT 131 (197)
T ss_dssp EECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcC
Confidence 337788888888765 44 3567788888887 78899999998865522111 112499999999999
Q ss_pred CcEEEEecC
Q 009719 227 GGYLVISGP 235 (527)
Q Consensus 227 GG~lviS~p 235 (527)
||++++...
T Consensus 132 gG~l~~~~~ 140 (197)
T 3eey_A 132 GGIITVVIY 140 (197)
T ss_dssp EEEEEEEEC
T ss_pred CCEEEEEEc
Confidence 999999864
No 140
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.89 E-value=2.1e-05 Score=76.68 Aligned_cols=84 Identities=10% Similarity=0.108 Sum_probs=61.1
Q ss_pred hhccccccccC---CeeEEeeccCcChHHHHHHHHHc-----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccCh
Q 009719 143 VASFGGSMLSE---NILTLSFAPRDSHKAQIQFALER-----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN 213 (527)
Q Consensus 143 vgsfga~Ll~r---~V~~msiAp~D~seaqvq~A~eR-----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~ 213 (527)
.|.++.+|... +..+..+ |.++.+++.|+++ |.+ +.+..+|+.. ++++++||+|++ |+++..
T Consensus 121 ~G~~~~~la~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~-----~~~~~~ 191 (275)
T 1yb2_A 121 SGNMSSYILYALNGKGTLTVV---ERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIA-----DIPDPW 191 (275)
T ss_dssp TSHHHHHHHHHHTTSSEEEEE---CSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEE-----CCSCGG
T ss_pred CCHHHHHHHHHcCCCCEEEEE---ECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEE-----cCcCHH
Confidence 34444555544 4433333 7788889888765 433 5667778766 888899999998 455554
Q ss_pred HHHHHHHhhcccCCcEEEEecCC
Q 009719 214 ATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 214 ~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
. +|.++.|+|||||+++++.+.
T Consensus 192 ~-~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 192 N-HVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp G-SHHHHHHTEEEEEEEEEEESS
T ss_pred H-HHHHHHHHcCCCCEEEEEeCC
Confidence 4 999999999999999999873
No 141
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.89 E-value=5.8e-06 Score=78.38 Aligned_cols=124 Identities=10% Similarity=0.034 Sum_probs=74.0
Q ss_pred CeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----c------------------------------
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----G------------------------------ 417 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----G------------------------------ 417 (527)
.-.+|||+|||.|.++..|..... -+|+-+|-. ..+..+-++ +
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 347899999999999988876654 233333332 333333221 1
Q ss_pred -cc-c-cccccCCCCCCCC---CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH--------
Q 009719 418 -LI-G-VYHDWCEPFSTYP---RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-------- 483 (527)
Q Consensus 418 -Li-G-~~hdwce~fstYP---rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~-------- 483 (527)
-+ - ...|..+.-+.-+ .+||+|.+..++.... .+.=....+|-|+-|+|+|||++|+.+..
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~-----~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~ 208 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAAC-----PDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIG 208 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC-----SSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEET
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhc-----CChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcC
Confidence 02 1 1123332211123 7999999988877321 00012467899999999999999997511
Q ss_pred ------H--HHHHHHHHHhcCCceeEEe
Q 009719 484 ------E--VIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 484 ------~--~~~~i~~i~~~l~W~~~~~ 503 (527)
. ..+.+.+++...-+++...
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 236 (265)
T 2i62_A 209 EQKFSSLPLGWETVRDAVEEAGYTIEQF 236 (265)
T ss_dssp TEEEECCCCCHHHHHHHHHHTTCEEEEE
T ss_pred CccccccccCHHHHHHHHHHCCCEEEEE
Confidence 0 2346777777777766543
No 142
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.89 E-value=4.4e-06 Score=79.06 Aligned_cols=120 Identities=18% Similarity=0.210 Sum_probs=75.3
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccc------ccc-ccccCCCCCCCCCccchhhhcCcc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGL------IGV-YHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGL------iG~-~hdwce~fstYPrtyDLiHa~~~f 445 (527)
-.+|||+|||.|.++.+|..... -+|+-+|.. ..+..+-++.- +-. ..|. +.++.-+.+||+|.+..++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL-QDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG-GGCCCCSSCEEEEEEESCG
T ss_pred CCEEEEECCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh-hhcCCCCCCEEEEEEcchh
Confidence 46899999999999998877631 122223322 33343333310 111 1222 1223223589999999888
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH---------------HHHHHHHHHHhcCCceeEEe
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP---------------EVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~---------------~~~~~i~~i~~~l~W~~~~~ 503 (527)
..+. + =.+..+|-|+-|+|+|||.+++.+.. ...++++++++..-++....
T Consensus 157 ~~~~------~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 157 GHLT------D-QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp GGSC------H-HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred hhCC------H-HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 7653 1 11347899999999999999996521 13667888888888876544
No 143
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.89 E-value=1.8e-06 Score=83.00 Aligned_cols=118 Identities=14% Similarity=0.226 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHhhhc----cc--ccc-c
Q 009719 352 RRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVIYDR----GL--IGV-Y 422 (527)
Q Consensus 352 ~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi~eR----GL--iG~-~ 422 (527)
..+......+.+.+.....-..=.+|||+|||.|.++..|.+. ..-|.-|=+. ++.+..+-++ |+ +-. .
T Consensus 16 ~~~~~~~~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~ 93 (276)
T 3mgg_A 16 LRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDIS--PESLEKARENTEKNGIKNVKFLQ 93 (276)
T ss_dssp -------CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESC--HHHHHHHHHHHHHTTCCSEEEEE
T ss_pred hhHHHHHHHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEEEE
Confidence 3344444444454443332233468999999999999988654 3333333221 1334443333 33 111 1
Q ss_pred cccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 423 HDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 423 hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.|.. .++.-+.+||+|++..++.... +...+|-++-|+|+|||++++.+
T Consensus 94 ~d~~-~~~~~~~~fD~v~~~~~l~~~~---------~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 94 ANIF-SLPFEDSSFDHIFVCFVLEHLQ---------SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp CCGG-GCCSCTTCEEEEEEESCGGGCS---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccc-cCCCCCCCeeEEEEechhhhcC---------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 2222 2232248999999999888664 23578999999999999999964
No 144
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.89 E-value=5.6e-05 Score=70.86 Aligned_cols=84 Identities=11% Similarity=-0.027 Sum_probs=60.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
.|.++.+|..++..+..+ |.++.+++.|+++ |++ +.+..+|+........+||+|++...+ +.. +
T Consensus 66 ~G~~~~~la~~~~~v~~v---D~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~-----~~~-~ 136 (204)
T 3njr_A 66 SGSVSVEWCLAGGRAITI---EPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG-----SQA-L 136 (204)
T ss_dssp TCHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC-----CHH-H
T ss_pred CCHHHHHHHHcCCEEEEE---eCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc-----cHH-H
Confidence 344455555555444444 7788899888765 555 567778877733334679999987654 344 9
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
+.++.|+|||||+++++..
T Consensus 137 l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 137 YDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp HHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHhcCCCcEEEEEec
Confidence 9999999999999999886
No 145
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.88 E-value=1.1e-05 Score=81.45 Aligned_cols=69 Identities=19% Similarity=0.199 Sum_probs=53.9
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|. +.+++.|+++ +++ +.+..+|...+|+++. |+|+++.+++||.+.. ..+|+++.|+|||||++++...
T Consensus 221 D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 221 NL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp EC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred ec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 44 4566666554 443 5677888888888865 9999999999998742 3499999999999999988763
No 146
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.87 E-value=4.2e-05 Score=69.47 Aligned_cols=103 Identities=11% Similarity=-0.009 Sum_probs=71.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccC--------hH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY--------NA 214 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~--------~~ 214 (527)
.|.++..|..++ .+...|.++.|++. .....+.++|+.. |+++++||+|+|+..+++..+. ..
T Consensus 34 ~G~~~~~l~~~~----~v~gvD~s~~~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~ 104 (170)
T 3q87_B 34 TGVITEQLRKRN----TVVSTDLNIRALES----HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDPIIGGGYLGR 104 (170)
T ss_dssp TCHHHHHHTTTS----EEEEEESCHHHHHT----CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGC
T ss_pred ccHHHHHHHhcC----cEEEEECCHHHHhc----ccCCeEEECChhh-hcccCCCCEEEECCCCccCCccccccCCcchH
Confidence 455555666666 34444788888877 2335677788876 8888999999999887654443 23
Q ss_pred HHHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEe
Q 009719 215 TYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELI 261 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~ 261 (527)
.++.++.+.| |||++++..+... .-+.+.++.+...|+..
T Consensus 105 ~~~~~~~~~l-pgG~l~~~~~~~~------~~~~l~~~l~~~gf~~~ 144 (170)
T 3q87_B 105 EVIDRFVDAV-TVGMLYLLVIEAN------RPKEVLARLEERGYGTR 144 (170)
T ss_dssp HHHHHHHHHC-CSSEEEEEEEGGG------CHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhhC-CCCEEEEEEecCC------CHHHHHHHHHHCCCcEE
Confidence 4899999999 9999999875211 12345556666666554
No 147
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.87 E-value=7.7e-06 Score=76.59 Aligned_cols=83 Identities=7% Similarity=-0.060 Sum_probs=60.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCC---CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
|.++..|...+. .+...|.++.+++.|+++.. .+.+..+|......++++||+|++..+++|+. .++
T Consensus 82 G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~-------~~~ 151 (231)
T 1vbf_A 82 GYYTALIAEIVD---KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAPTLL-------CKP 151 (231)
T ss_dssp SHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBSSCC-------HHH
T ss_pred CHHHHHHHHHcC---EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHHHHH-------HHH
Confidence 444445555543 23333778899999987632 45667778766333578999999999987764 478
Q ss_pred hhcccCCcEEEEecCC
Q 009719 221 DRLLRPGGYLVISGPP 236 (527)
Q Consensus 221 ~RVLRPGG~lviS~pp 236 (527)
.|+|||||+++++.++
T Consensus 152 ~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 152 YEQLKEGGIMILPIGV 167 (231)
T ss_dssp HHTEEEEEEEEEEECS
T ss_pred HHHcCCCcEEEEEEcC
Confidence 9999999999999874
No 148
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.86 E-value=3.9e-05 Score=73.09 Aligned_cols=67 Identities=16% Similarity=0.101 Sum_probs=52.4
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCC---CCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFP---AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFp---D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.++++|+++ +++ +.+..++++.++++ +++||+|+|... . +...++.++.|+|||||+|++...
T Consensus 101 D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~----~-~~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 101 DSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARAV----A-RLSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp ESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEECC----S-CHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred eCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEecc----C-CHHHHHHHHHHhcCCCCEEEEEeC
Confidence 7788888888753 553 66778888888875 789999998652 2 334499999999999999998743
No 149
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=97.85 E-value=3.6e-06 Score=80.45 Aligned_cols=95 Identities=17% Similarity=0.172 Sum_probs=64.2
Q ss_pred CeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----ccc---ccccccCCCCCCCC-CccchhhhcC
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLI---GVYHDWCEPFSTYP-RTYDLIHVSG 443 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLi---G~~hdwce~fstYP-rtyDLiHa~~ 443 (527)
.-.+|||+|||.|.++..|....- .|+-.|.. ..+..+-++ |+- -+..|.. .++ +| .+||+|.+..
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~l~-~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QMP-FTDERFHIVTCRI 111 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CCC-SCTTCEEEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH-hCC-CCCCCEEEEEEhh
Confidence 456899999999999998876532 44444433 444444333 431 1122322 233 34 8999999998
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
++-.+. +...+|-|+-|+|||||++++.+
T Consensus 112 ~l~~~~---------d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 112 AAHHFP---------NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp CGGGCS---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhHhcC---------CHHHHHHHHHHHcCCCCEEEEEE
Confidence 887653 24689999999999999999964
No 150
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.85 E-value=3.2e-06 Score=77.86 Aligned_cols=97 Identities=10% Similarity=0.124 Sum_probs=65.2
Q ss_pred CeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccccccccccCCCCCCCC-CccchhhhcCccccccC
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIGVYHDWCEPFSTYP-RTYDLIHVSGIESLIKN 450 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~~hdwce~fstYP-rtyDLiHa~~~fs~~~~ 450 (527)
.-.+|||+|||.|.++.+|...+. +|+-.|.. ..+..+-++..--+..|..+.-..++ .+||+|.+..++....
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~- 107 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGT---RVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLF- 107 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTC---EEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSS-
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcC-
Confidence 346899999999999999988763 33333433 44444444432111223222112244 7999999998887653
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+...+|-|+-|+|+|||++++..
T Consensus 108 --------~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 108 --------DPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp --------CHHHHHHHTGGGEEEEEEEEEEE
T ss_pred --------CHHHHHHHHHHHcCCCCEEEEEe
Confidence 23689999999999999999974
No 151
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=97.84 E-value=2.5e-06 Score=80.84 Aligned_cols=93 Identities=13% Similarity=0.181 Sum_probs=60.7
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----ccc---cc-cccccCCCCCCCCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGL---IG-VYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGL---iG-~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
.+|||+|||.|.++.+|.+. +.-| +-+|.. ..+..+-+ .|+ +- ...|+.+ ++. +.+||+|.+..+
T Consensus 38 ~~VLDiGcG~G~~~~~la~~~~~~v---~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~fD~V~~~~~ 112 (256)
T 1nkv_A 38 TRILDLGSGSGEMLCTWARDHGITG---TGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG-YVA-NEKCDVAACVGA 112 (256)
T ss_dssp CEEEEETCTTCHHHHHHHHHTCCEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT-CCC-SSCEEEEEEESC
T ss_pred CEEEEECCCCCHHHHHHHHhcCCeE---EEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh-CCc-CCCCCEEEECCC
Confidence 58999999999999888643 3222 222222 33443332 344 11 2223332 222 689999999877
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+-.+. +...+|-|+-|+|||||.+++.+
T Consensus 113 ~~~~~---------~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 113 TWIAG---------GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp GGGTS---------SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred hHhcC---------CHHHHHHHHHHHcCCCeEEEEec
Confidence 76542 24788999999999999999975
No 152
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.84 E-value=1.2e-05 Score=77.53 Aligned_cols=84 Identities=20% Similarity=0.161 Sum_probs=61.1
Q ss_pred hhccccccccC---CeeEEeeccCcChHHHHHHHHHc-----C--C-CcEEeeccccCCCCCCCcccEEEecCccccccc
Q 009719 143 VASFGGSMLSE---NILTLSFAPRDSHKAQIQFALER-----G--I-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA 211 (527)
Q Consensus 143 vgsfga~Ll~r---~V~~msiAp~D~seaqvq~A~eR-----g--~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d 211 (527)
.|.++.+|... +..+..+ |.++.+++.|+++ | . ...+..+|+..+++++++||+|++. .++
T Consensus 110 ~G~~~~~l~~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~-----~~~ 181 (280)
T 1i9g_A 110 SGALTLSLLRAVGPAGQVISY---EQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLD-----MLA 181 (280)
T ss_dssp TSHHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEE-----SSC
T ss_pred ccHHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEEC-----CcC
Confidence 34455555543 3333333 7778888888765 3 2 3567778988899999999999983 233
Q ss_pred ChHHHHHHHhhcccCCcEEEEecC
Q 009719 212 YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 212 ~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
... +|.++.|+|||||+++++.+
T Consensus 182 ~~~-~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 182 PWE-VLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp GGG-GHHHHHHHEEEEEEEEEEES
T ss_pred HHH-HHHHHHHhCCCCCEEEEEeC
Confidence 334 89999999999999999987
No 153
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.84 E-value=7.8e-06 Score=77.36 Aligned_cols=94 Identities=15% Similarity=0.159 Sum_probs=63.4
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc------cccccccccCCCCCCCCCccchhhhcCccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR------GLIGVYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR------GLiG~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
-.+|||+|||.|.++..|.+...- |+-+|-. ..+..+-++ ++--+..|. +.++.-+.+||+|++..++.
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARGYR---YIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTTCE---EEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCGG
T ss_pred CCEEEEeCCcCCHHHHHHHHCCCE---EEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCchh
Confidence 468999999999999999877543 3333332 445554444 111122233 23332237899999998877
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
... +...+|-|+-|+|+|||.+++.
T Consensus 116 ~~~---------~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 116 LVP---------DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GCT---------THHHHHHHHHHHEEEEEEEEEE
T ss_pred hcC---------CHHHHHHHHHHHCCCCcEEEEE
Confidence 542 3477999999999999999986
No 154
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.83 E-value=1.4e-05 Score=77.27 Aligned_cols=71 Identities=18% Similarity=0.169 Sum_probs=50.9
Q ss_pred cChHHHHHHHHHc----------CC-CcEEeeccccC-CC--CCCCcccEEEecCcccccccCh--------HHHHHHHh
Q 009719 164 DSHKAQIQFALER----------GI-PAFVAMLGTRR-LP--FPAFSFDIVHCSRCLIPFTAYN--------ATYLIEVD 221 (527)
Q Consensus 164 D~seaqvq~A~eR----------g~-pa~~~v~dae~-LP--FpD~SFDlV~cs~~l~hw~d~~--------~~aL~Ei~ 221 (527)
|.++.|++.|+++ +. .+.+..+|+.. || |++++||.|++... .+|.... ..+|.++.
T Consensus 77 Dis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~ 155 (235)
T 3ckk_A 77 EIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFP-DPHFKRTKHKWRIISPTLLAEYA 155 (235)
T ss_dssp ESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEEEEESC-C-----------CCCHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeCC-CchhhhhhhhhhhhhHHHHHHHH
Confidence 6677888877642 33 35677788876 88 89999999987654 2443210 24999999
Q ss_pred hcccCCcEEEEecC
Q 009719 222 RLLRPGGYLVISGP 235 (527)
Q Consensus 222 RVLRPGG~lviS~p 235 (527)
|+|||||.|++.+.
T Consensus 156 ~~LkpGG~l~~~td 169 (235)
T 3ckk_A 156 YVLRVGGLVYTITD 169 (235)
T ss_dssp HHEEEEEEEEEEES
T ss_pred HHCCCCCEEEEEeC
Confidence 99999999999875
No 155
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.83 E-value=6.8e-06 Score=79.76 Aligned_cols=116 Identities=11% Similarity=0.144 Sum_probs=72.9
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc-cc-cccccCCCCCCCCCccchhhhcCccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL-IG-VYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL-iG-~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
-..|||+|||.|.++.+|..... +|+-+|-. ..+..+-+ .|+ +- +..|..+ ++. +.+||+|.+..+|.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~-~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDINA-ANI-QENYDFIVSTVVFM 195 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGG-CCC-CSCEEEEEECSSGG
T ss_pred CCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEecccc-ccc-cCCccEEEEccchh
Confidence 35799999999999999987754 33333332 33333332 343 11 1122222 222 68999999999887
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeCC--------------HHHHHHHHHHHhcCCceeEEe
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--------------PEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--------------~~~~~~i~~i~~~l~W~~~~~ 503 (527)
... .-.+..+|-++-|+|+|||.+++-.. .-.-.+++++... |++...
T Consensus 196 ~~~-------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 196 FLN-------RERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp GSC-------GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred hCC-------HHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEE
Confidence 552 23456799999999999999777421 0013456666666 887655
No 156
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.83 E-value=4e-06 Score=80.34 Aligned_cols=94 Identities=24% Similarity=0.327 Sum_probs=62.3
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc----ccc---c-cccccCCCCCCCC-Cccchhhhc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR----GLI---G-VYHDWCEPFSTYP-RTYDLIHVS 442 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR----GLi---G-~~hdwce~fstYP-rtyDLiHa~ 442 (527)
-.+|||+|||.|.++..|.+. +.- |+-++-. ..+..+-++ |+- - +..|..+ ++ +| .+||+|.+.
T Consensus 62 ~~~vLDiGcG~G~~~~~l~~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~fD~v~~~ 136 (273)
T 3bus_A 62 GDRVLDVGCGIGKPAVRLATARDVR---VTGISISRPQVNQANARATAAGLANRVTFSYADAMD-LP-FEDASFDAVWAL 136 (273)
T ss_dssp TCEEEEESCTTSHHHHHHHHHSCCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS-CC-SCTTCEEEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCE---EEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc-CC-CCCCCccEEEEe
Confidence 458999999999999888653 332 2223322 444444333 442 1 1223322 22 34 799999999
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+|.... +...+|-|+-|+|+|||.+++.+
T Consensus 137 ~~l~~~~---------~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 137 ESLHHMP---------DRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp SCTTTSS---------CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred chhhhCC---------CHHHHHHHHHHHcCCCeEEEEEE
Confidence 8887653 23688999999999999999985
No 157
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.83 E-value=4e-06 Score=75.02 Aligned_cols=116 Identities=16% Similarity=0.155 Sum_probs=70.0
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-----cccccccCCCCCCCCCccchhhhcC
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-----IGVYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-----iG~~hdwce~fstYPrtyDLiHa~~ 443 (527)
-.+|||+|||.|.++.+|..... +|.-.|.. ..+..+-++ |+ --+..|..+.++ +.+||+|.++.
T Consensus 53 ~~~vLdiG~G~G~~~~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~ 127 (194)
T 1dus_A 53 DDDILDLGCGYGVIGIALADEVK---STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITNP 127 (194)
T ss_dssp TCEEEEETCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEECC
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEECC
Confidence 35899999999999988877633 23333322 334443333 32 123344444333 57899999876
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH-HHHHHHHHHHhcCCceeEE
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-EVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~-~~~~~i~~i~~~l~W~~~~ 502 (527)
.|... .-.+..++-++-|+|+|||.+++.+.. +...++.+.++..-+++..
T Consensus 128 ~~~~~--------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (194)
T 1dus_A 128 PIRAG--------KEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVET 179 (194)
T ss_dssp CSTTC--------HHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEE
T ss_pred Ccccc--------hhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEE
Confidence 55421 113457899999999999999998643 3334344444443334433
No 158
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.83 E-value=2.2e-05 Score=69.85 Aligned_cols=112 Identities=16% Similarity=0.113 Sum_probs=72.3
Q ss_pred eeeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhc----ccc---ccccccCCCCCCCCCccchhhhcC
Q 009719 374 IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDR----GLI---GVYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eR----GLi---G~~hdwce~fstYPrtyDLiHa~~ 443 (527)
-.+|||+|||.|.++..|... ..-| +-.|-. ..+..+-++ |+- -+..|..+.|+..+.+||+|.+..
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~~~~v---~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTPQTTA---VCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSSSEEE---EEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCCeE---EEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECC
Confidence 468999999999999988665 3323 223332 344444433 432 222344455554447899999875
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCceeE
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~~~ 501 (527)
.+.. ..++-++-|+|+|||.+++.+. .+....+.++.+...+++.
T Consensus 103 ~~~~-------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 103 GLTA-------------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp -TTC-------------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEE
T ss_pred cccH-------------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeE
Confidence 5542 5689999999999999999863 4455666666666655543
No 159
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.82 E-value=1.1e-06 Score=83.11 Aligned_cols=87 Identities=15% Similarity=0.084 Sum_probs=66.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
.|.++.+|..++..+. ..|.++.+++.|+++ ++ .+.+.++|+..++ ++++||+|++...++|..+... .
T Consensus 89 ~G~~~~~la~~~~~v~---~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~~~~~-~ 163 (241)
T 3gdh_A 89 VGGNTIQFALTGMRVI---AIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGGPDYATA-E 163 (241)
T ss_dssp TSHHHHHHHHTTCEEE---EEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSSGGGGGS-S
T ss_pred cCHHHHHHHHcCCEEE---EEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCCcchhhh-H
Confidence 4566667777764433 347888899888754 54 4677888988877 7789999999988877655544 7
Q ss_pred HHHHhhcccCCcEEEEec
Q 009719 217 LIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~ 234 (527)
+.|+.|+|||||++++..
T Consensus 164 ~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 164 TFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SBCTTTSCSSCHHHHHHH
T ss_pred HHHHHhhcCCcceeHHHH
Confidence 889999999999988754
No 160
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.81 E-value=3.6e-05 Score=72.25 Aligned_cols=70 Identities=14% Similarity=0.157 Sum_probs=51.2
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CCCCC-----CcccEEEecCcccccccChHHHHHHHhhcccCCcEEE
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LPFPA-----FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LPFpD-----~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
|.++.+++.|+++ ++. +.+.++|+.. +|... ++||+|++.....++.+... ++.++ |+|||||+++
T Consensus 90 D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~-~~~~~-~~LkpgG~lv 167 (221)
T 3u81_A 90 EINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTL-LLEKC-GLLRKGTVLL 167 (221)
T ss_dssp ESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHH-HHHHT-TCCCTTCEEE
T ss_pred eCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHH-HHHhc-cccCCCeEEE
Confidence 6778888888764 543 5667777643 55433 79999999877666654433 67777 9999999999
Q ss_pred EecC
Q 009719 232 ISGP 235 (527)
Q Consensus 232 iS~p 235 (527)
+...
T Consensus 168 ~~~~ 171 (221)
T 3u81_A 168 ADNV 171 (221)
T ss_dssp ESCC
T ss_pred EeCC
Confidence 9764
No 161
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.81 E-value=8.4e-06 Score=75.81 Aligned_cols=88 Identities=16% Similarity=0.158 Sum_probs=56.2
Q ss_pred hhccccccccC--CeeEEeeccCcChHHHHHH----HHH----cCC-CcEEeeccccCCCCCCCcccEEEecCc---c--
Q 009719 143 VASFGGSMLSE--NILTLSFAPRDSHKAQIQF----ALE----RGI-PAFVAMLGTRRLPFPAFSFDIVHCSRC---L-- 206 (527)
Q Consensus 143 vgsfga~Ll~r--~V~~msiAp~D~seaqvq~----A~e----Rg~-pa~~~v~dae~LPFpD~SFDlV~cs~~---l-- 206 (527)
.|.++.+|..+ +..+..+ |.++.|++. |++ ++. .+.+.++|++.+||++++ |.|..... +
T Consensus 38 ~G~~~~~la~~~p~~~v~gv---D~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~~~~~~~~ 113 (218)
T 3mq2_A 38 DGKHPYKVARQNPSRLVVAL---DADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVLMPWGSLLR 113 (218)
T ss_dssp TCHHHHHHHHHCTTEEEEEE---ESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEESCCHHHHH
T ss_pred CCHHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEEccchhhhh
Confidence 34444455554 3333333 555565553 222 244 356788999999999888 88873321 1
Q ss_pred cccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 207 IPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 207 ~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+|..+... +|.|+.|+|||||+|+++..
T Consensus 114 ~~~~~~~~-~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 114 GVLGSSPE-MLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp HHHTSSSH-HHHHHHHTEEEEEEEEEEEE
T ss_pred hhhccHHH-HHHHHHHHcCCCcEEEEEec
Confidence 14444455 99999999999999999653
No 162
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.81 E-value=2.3e-05 Score=79.28 Aligned_cols=103 Identities=17% Similarity=0.111 Sum_probs=68.3
Q ss_pred ccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCccccc---c-cChHHHHHHHhhcccCCcEEEE
Q 009719 161 APRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPF---T-AYNATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 161 Ap~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw---~-d~~~~aL~Ei~RVLRPGG~lvi 232 (527)
...|.++.+++.|+++ ++...+..+|.. ++++++||+|+|+..+++- . +....+|.++.|+|||||.|++
T Consensus 224 ~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~--~~~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 224 TLCDVSAPAVEASRATLAANGVEGEVFASNVF--SEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp EEEESBHHHHHHHHHHHHHTTCCCEEEECSTT--TTCCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHHhCCCCEEEEcccc--ccccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 3347778888888764 555566666654 3558899999999887541 1 1223499999999999999999
Q ss_pred ecCCCCCCCchhHHHHHHHHHHhcceEEeeeecceEEEeC
Q 009719 233 SGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKK 272 (527)
Q Consensus 233 S~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~iwrK 272 (527)
..+... .+.. .++.... .++.+.+.....||+.
T Consensus 302 ~~~~~~---~~~~--~l~~~f~--~~~~~~~~~gf~v~~~ 334 (343)
T 2pjd_A 302 VANAFL---PYPD--VLDETFG--FHEVIAQTGRFKVYRA 334 (343)
T ss_dssp EEETTS---SHHH--HHHHHHS--CCEEEEECSSEEEEEE
T ss_pred EEcCCC---CcHH--HHHHhcC--ceEEEeeCCCEEEEEE
Confidence 876321 1221 1222222 2577777778888865
No 163
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.81 E-value=1.1e-05 Score=74.12 Aligned_cols=128 Identities=13% Similarity=0.141 Sum_probs=74.4
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----ccc--cccc-cccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGL--IGVY-HDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGL--iG~~-hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|||+|||.|.++.+|... |-. +|+-.|.. ..+..+-+ .|+ +-++ .|+.+ +. -+.+||+|.+..+
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~-~~~~~D~i~~~~~- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEA--HFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEE-FP-SEPPFDGVISRAF- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTS--EEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTT-SC-CCSCEEEEECSCS-
T ss_pred CeEEEECCCCCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhh-CC-ccCCcCEEEEecc-
Confidence 47999999999998888643 211 22222222 33333322 244 2222 23332 21 1378999987532
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEEec--CCCCCCCCceEEEEEec
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVHD--KEPGSNGREKILVATKS 521 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~~~--~e~~~~~~ekiLi~~K~ 521 (527)
. .+..++-++-|+|+|||++++......-++++++.+ .|+..... .-+...+...+++++|+
T Consensus 142 ~------------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 A------------SLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp S------------SHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred C------------CHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 1 246789999999999999999865444556666655 67654311 12223345677777774
No 164
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.81 E-value=8.3e-06 Score=78.37 Aligned_cols=116 Identities=17% Similarity=0.198 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccc-cccccccCCCC
Q 009719 352 RRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGL-IGVYHDWCEPF 429 (527)
Q Consensus 352 ~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGL-iG~~hdwce~f 429 (527)
..|+.......+.+...+. .-.+|||+|||.|.++..|.+... +|+-+|.. ..+..+-++.. .-+..|. +.+
T Consensus 35 ~~~~~~~~~~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~d~-~~~ 108 (260)
T 2avn_A 35 PKWKLYHRLIGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVKNVVEAKA-EDL 108 (260)
T ss_dssp HHHHHHHHHHHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCSCEEECCT-TSC
T ss_pred cchhHHHHHHHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCCCEEECcH-HHC
Confidence 4564333334444444444 345899999999999999987754 33333333 45555555543 1111121 123
Q ss_pred CCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 430 STYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 430 stYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+.-+.+||+|-+...+..+. . +...+|-|+-|+|+|||.+++..
T Consensus 109 ~~~~~~fD~v~~~~~~~~~~------~--~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 109 PFPSGAFEAVLALGDVLSYV------E--NKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp CSCTTCEEEEEECSSHHHHC------S--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEcchhhhcc------c--cHHHHHHHHHHHcCCCeEEEEEe
Confidence 31137899999987665553 1 16789999999999999999975
No 165
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.80 E-value=4.9e-06 Score=84.78 Aligned_cols=66 Identities=15% Similarity=0.068 Sum_probs=52.4
Q ss_pred cChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|. +.+++.|++. ..+.+..+|... |+|+ ||+|+++.+++||.+.. ..+|+++.|+|||||+|++..
T Consensus 240 D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 240 DL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp EC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Ch-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 66 6777766543 235667778766 7876 99999999999998765 149999999999999999975
No 166
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.80 E-value=4e-06 Score=79.61 Aligned_cols=95 Identities=16% Similarity=0.235 Sum_probs=63.8
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc--cc-cccccCCCCCCCCCccchhhhcCcc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL--IG-VYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL--iG-~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
-.+|||+|||.|.++.+|.+..- +|+-+|.. ..+..+-+ +|+ +- +..|. +.++.-+.+||+|.+..++
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v~~~~~l 97 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA-ESLPFPDDSFDIITCRYAA 97 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT-TBCCSCTTCEEEEEEESCG
T ss_pred CCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc-ccCCCCCCcEEEEEECCch
Confidence 45899999999999998876542 33434433 44444333 243 11 12232 3343223899999999888
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..+. +...+|-|+-|+|+|||++++.+
T Consensus 98 ~~~~---------~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 98 HHFS---------DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp GGCS---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcc---------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 7663 25789999999999999999974
No 167
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.79 E-value=2.6e-05 Score=74.32 Aligned_cols=136 Identities=17% Similarity=0.165 Sum_probs=80.1
Q ss_pred eeeEeecCCCccchhhhcc--CCCeeEEEecCCCCCCchhHhhh----ccc--cccccccCCCCCC---CCCccchhhhc
Q 009719 374 IRNIMDMNAFFGGFAAALT--SDPVWVMNVVPARKSSTLSVIYD----RGL--IGVYHDWCEPFST---YPRTYDLIHVS 442 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~--~~~VwvMnvvp~~~~ntl~vi~e----RGL--iG~~hdwce~fst---YPrtyDLiHa~ 442 (527)
-.+|||+|||.|.++..|. ....-|.-|=.. +..+.++-+ .|+ +-+++.=.+.++. .+.+||+|.+.
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSL--NKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESC--HHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 3589999999998887775 333333333221 123333322 344 3333211122221 24789999986
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC---CHHHHHHHHHHHhcCCceeEEecC--CCCCCCCceEEE
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD---SPEVIDKVSRIANTVRWTAAVHDK--EPGSNGREKILV 517 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird---~~~~~~~i~~i~~~l~W~~~~~~~--e~~~~~~ekiLi 517 (527)
.+ .++..++-++-|+|+|||.+++-+ ..+.+.++.+.++...++...... -+...+...+++
T Consensus 149 ~~-------------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~ 215 (240)
T 1xdz_A 149 AV-------------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMV 215 (240)
T ss_dssp CC-------------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEE
T ss_pred cc-------------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEE
Confidence 42 235678999999999999999875 244566677777777887643211 122223456777
Q ss_pred EEeccCC
Q 009719 518 ATKSLWK 524 (527)
Q Consensus 518 ~~K~~w~ 524 (527)
++|.=.+
T Consensus 216 ~~k~~~~ 222 (240)
T 1xdz_A 216 IRKIKNT 222 (240)
T ss_dssp EEECSCC
T ss_pred EEecCCC
Confidence 7776433
No 168
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.79 E-value=7.7e-06 Score=79.24 Aligned_cols=95 Identities=13% Similarity=0.135 Sum_probs=63.8
Q ss_pred CeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc--cccccccccCCCCCCCCCccchhhhcCcccccc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR--GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR--GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
.-.+|||+|||.|.++.+|.+...-|.- .|-. ..+..+-++ ++-=...|.. .++ ++.+||+|++..++....
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~g---vD~s~~~~~~a~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLG---TDNAATMIEKARQNYPHLHFDVADAR-NFR-VDKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEE---EESCHHHHHHHHHHCTTSCEEECCTT-TCC-CSSCEEEEEEESCGGGCS
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEE---EECCHHHHHHHHhhCCCCEEEECChh-hCC-cCCCcCEEEEcchhhhCc
Confidence 3468999999999999999774433322 2322 444444444 2211222322 233 478999999998887543
Q ss_pred CCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+...+|-|+-|+|||||++++..
T Consensus 132 ---------d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 132 ---------EPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp ---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------CHHHHHHHHHHhcCCCcEEEEEe
Confidence 34678999999999999999963
No 169
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.79 E-value=4.3e-06 Score=77.25 Aligned_cols=116 Identities=15% Similarity=0.120 Sum_probs=77.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc-cccccccccCCCCCCCCCccchhhhcCccccccCCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR-GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPG 452 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR-GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~ 452 (527)
..|||+|||.|.++..|.+... +|+-+|.. ..+..+-++ ++--...|.. .++ .+.+||+|.+..++....
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~--- 116 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLFH-QLD-AIDAYDAVWAHACLLHVP--- 116 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCGG-GCC-CCSCEEEEEECSCGGGSC---
T ss_pred CcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeeec-cCC-CCCcEEEEEecCchhhcC---
Confidence 4899999999999999987754 33333433 555555555 3322222322 233 458999999998887542
Q ss_pred CCCCCCcccccceeecccccCCcEEEEeCCH---------------HHHHHHHHHHhcCC-ceeEE
Q 009719 453 SNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP---------------EVIDKVSRIANTVR-WTAAV 502 (527)
Q Consensus 453 ~~~~rC~~~~illEmDRILRP~G~~iird~~---------------~~~~~i~~i~~~l~-W~~~~ 502 (527)
.-+...+|-|+-|+|+|||++++.... -..+.++++++.-- +++..
T Consensus 117 ----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~ 178 (211)
T 3e23_A 117 ----RDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVA 178 (211)
T ss_dssp ----HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEE
T ss_pred ----HHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEE
Confidence 123467899999999999999997311 13567777777776 77654
No 170
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.78 E-value=7.5e-06 Score=75.85 Aligned_cols=97 Identities=14% Similarity=0.210 Sum_probs=62.3
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc-------cccc-cccCCCCCCCCCccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL-------IGVY-HDWCEPFSTYPRTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL-------iG~~-hdwce~fstYPrtyDLiHa 441 (527)
.+|||+|||.|.++.+|..... +|+-.|-. ..+..+-+ .|+ +-.. .|. +.++.-+.+||+|-+
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA-SSLSFHDSSFDFAVM 107 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT-TSCCSCTTCEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc-cccCCCCCceeEEEE
Confidence 4799999999999999977754 33333332 44444433 232 1111 121 222322479999999
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..++.... +.-....+|-|+-|+|||||.+++.+
T Consensus 108 ~~~l~~~~------~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 108 QAFLTSVP------DPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp ESCGGGCC------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhcCC------CHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 98887654 21112378999999999999999974
No 171
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.77 E-value=2e-06 Score=81.46 Aligned_cols=98 Identities=15% Similarity=0.167 Sum_probs=65.4
Q ss_pred CeeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhcc-----ccccccccCCCCCCCCCccchhhhcCcc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDRG-----LIGVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eRG-----LiG~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
.-.+|||+|||.|.++..|.+. ..- |+-+|-. ..+..+-++. +--+..|..+ ++.-+.+||+|.+..++
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l 130 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYGAH---THGIDICSNIVNMANERVSGNNKIIFEANDILT-KEFPENNFDLIYSRDAI 130 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCE---EEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-CCCCTTCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCCE---EEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-CCCCCCcEEEEeHHHHH
Confidence 3458999999999999998765 432 2333322 4555555543 1112334333 22224899999999888
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..+. .-+...+|-|+-|+|||||.+++.+
T Consensus 131 ~~~~-------~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 131 LALS-------LENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp GGSC-------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhcC-------hHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 7651 1234678999999999999999985
No 172
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.77 E-value=3.6e-05 Score=75.77 Aligned_cols=112 Identities=6% Similarity=0.092 Sum_probs=74.4
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
+|.|+-++..++.. .+...|.++.+++.|+++ ++. ..+..+|+..+++ +++||+|++... .....+
T Consensus 136 ~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p-----~~~~~~ 207 (278)
T 2frn_A 136 IGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-----VRTHEF 207 (278)
T ss_dssp TTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-----SSGGGG
T ss_pred CCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc-----hhHHHH
Confidence 56666666665543 233337788888888764 554 4577889988887 889999998533 122348
Q ss_pred HHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEee
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIA 262 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~ 262 (527)
+.++.|+|||||++++.+....-.......+.+.+.++...|+...
T Consensus 208 l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 208 IPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp HHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 9999999999999999664210000112345667777777776654
No 173
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.76 E-value=3.3e-05 Score=68.91 Aligned_cols=101 Identities=12% Similarity=0.074 Sum_probs=65.7
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCC-CcccEEEecCcccccccChHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPA-FSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD-~SFDlV~cs~~l~hw~d~~~~a 216 (527)
|.++..+...+. .+...|.++.+++.|+++ +. ...+..+|... ++++ ++||+|++..++.|+ ..+
T Consensus 45 G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~~----~~~ 116 (192)
T 1l3i_A 45 GGVTLELAGRVR---RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGGSGGEL----QEI 116 (192)
T ss_dssp SHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESCCTTCH----HHH
T ss_pred CHHHHHHHHhcC---EEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECCchHHH----HHH
Confidence 344444555542 333447778888888764 44 34566667655 4444 689999999876543 349
Q ss_pred HHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcce
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCY 258 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW 258 (527)
+.++.|+|+|||++++..+. ......+.++.+...|
T Consensus 117 l~~~~~~l~~gG~l~~~~~~------~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 117 LRIIKDKLKPGGRIIVTAIL------LETKFEAMECLRDLGF 152 (192)
T ss_dssp HHHHHHTEEEEEEEEEEECB------HHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCcEEEEEecC------cchHHHHHHHHHHCCC
Confidence 99999999999999998762 2223344455555555
No 174
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.76 E-value=2.1e-05 Score=68.66 Aligned_cols=133 Identities=16% Similarity=0.190 Sum_probs=72.9
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhccccccccccCCCCCC-------C-CCccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFST-------Y-PRTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~fst-------Y-PrtyDLiHa 441 (527)
.+|||+|||.|.++.+|.+. .|..+-+-| -. . + . .+--+..|..+. +. + +.+||+|.+
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~-~-~----~-~~~~~~~d~~~~-~~~~~~~~~~~~~~~D~i~~ 94 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MD-P-I----V-GVDFLQGDFRDE-LVMKALLERVGDSKVQVVMS 94 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CC-C-C----T-TEEEEESCTTSH-HHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cc-c-c----C-cEEEEEcccccc-hhhhhhhccCCCCceeEEEE
Confidence 48999999999999888544 344444433 11 1 1 1 111112232221 10 2 378999999
Q ss_pred cCccccccCCCCCCCCCc------ccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCceeEE-e-cCCCCCCCC
Q 009719 442 SGIESLIKNPGSNKNSCS------LVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWTAAV-H-DKEPGSNGR 512 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~------~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~~~~-~-~~e~~~~~~ 512 (527)
+..+.... ....-. ...+|-++-|+|+|||.+++... .+....+.+.... .|+... . .........
T Consensus 95 ~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 169 (180)
T 1ej0_A 95 DMAPNMSG----TPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDSSRARSR 169 (180)
T ss_dssp CCCCCCCS----CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTTSCTTCC
T ss_pred CCCccccC----CCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCcccccCc
Confidence 77665321 000000 14688899999999999999742 1222333333333 265433 2 222334456
Q ss_pred ceEEEEEec
Q 009719 513 EKILVATKS 521 (527)
Q Consensus 513 ekiLi~~K~ 521 (527)
|..++|++.
T Consensus 170 ~~~~~~~~~ 178 (180)
T 1ej0_A 170 EVYIVATGR 178 (180)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEccC
Confidence 888888763
No 175
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.76 E-value=4.2e-06 Score=82.06 Aligned_cols=97 Identities=13% Similarity=0.217 Sum_probs=58.6
Q ss_pred eeeEeecCCCccchhhh----ccC--CCeeEEEecCCCCC-CchhHhhhc-----cccccccccC----CCCC-----CC
Q 009719 374 IRNIMDMNAFFGGFAAA----LTS--DPVWVMNVVPARKS-STLSVIYDR-----GLIGVYHDWC----EPFS-----TY 432 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAa----L~~--~~VwvMnvvp~~~~-ntl~vi~eR-----GLiG~~hdwc----e~fs-----tY 432 (527)
=..|||+|||.|.++.. |.. ..+-| .++-+|.. +-|..+-+| |+-.+--.|. +.+. .+
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v-~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCI-NNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEE-EEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCcee-eEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 35799999999986542 322 23422 22333333 444444433 3322111111 1121 12
Q ss_pred -CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 433 -PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 433 -PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+.+||+|+|..++-.+. +....|-||-|+|+|||.+++.
T Consensus 132 ~~~~fD~V~~~~~l~~~~---------d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVK---------DIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CCCCEEEEEEESCGGGCS---------CHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCceeEEEEeeeeeecC---------CHHHHHHHHHHHcCCCcEEEEE
Confidence 48999999998888664 2467999999999999999985
No 176
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.76 E-value=1.2e-05 Score=77.46 Aligned_cols=95 Identities=21% Similarity=0.202 Sum_probs=61.9
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhhccccc-cccccCCCCCCCCCccchhhhcCccccccCCC
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDRGLIG-VYHDWCEPFSTYPRTYDLIHVSGIESLIKNPG 452 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~eRGLiG-~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~ 452 (527)
-.+|||+|||.|.++..|.+...-|.-|=+.. ..+..+-++.-+- +..|. +.++.-+.+||+||+..++..+.
T Consensus 35 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~--- 108 (261)
T 3ege_A 35 GSVIADIGAGTGGYSVALANQGLFVYAVEPSI--VMRQQAVVHPQVEWFTGYA-ENLALPDKSVDGVISILAIHHFS--- 108 (261)
T ss_dssp TCEEEEETCTTSHHHHHHHTTTCEEEEECSCH--HHHHSSCCCTTEEEECCCT-TSCCSCTTCBSEEEEESCGGGCS---
T ss_pred CCEEEEEcCcccHHHHHHHhCCCEEEEEeCCH--HHHHHHHhccCCEEEECch-hhCCCCCCCEeEEEEcchHhhcc---
Confidence 46899999999999999988654443332221 3233222332111 12232 33442248999999999887653
Q ss_pred CCCCCCcccccceeecccccCCcEEEEeC
Q 009719 453 SNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 453 ~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+...+|-|+-|+|| ||++++.+
T Consensus 109 ------~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 109 ------HLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp ------SHHHHHHHHHHHBC-SSCEEEEE
T ss_pred ------CHHHHHHHHHHHhC-CcEEEEEE
Confidence 34789999999999 99887764
No 177
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.76 E-value=1.5e-05 Score=72.56 Aligned_cols=165 Identities=12% Similarity=0.052 Sum_probs=82.7
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCC--C--eeEEEecCCCCCCchhHhhhccc--cccc
Q 009719 349 ADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSD--P--VWVMNVVPARKSSTLSVIYDRGL--IGVY 422 (527)
Q Consensus 349 ~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~--~--VwvMnvvp~~~~ntl~vi~eRGL--iG~~ 422 (527)
.+++.+.+.+-.+... . ..=.+|||+|||.|.++.+|.+. . |..+-+-|.--...-..+-..|+ -=+.
T Consensus 12 ~~~~~~~~~~~~~l~~----~--~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 85 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLKR----M--PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAA 85 (215)
T ss_dssp HHHHHHHHHHHHHHTT----C--CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCH
T ss_pred ccHHHHHHHHHHHhhh----c--CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEE
Confidence 4556665555443321 1 23468999999999999888654 3 33332222211100011111121 1122
Q ss_pred cccCCCCCC---CCCccchhhhcCccccccCCC---CC----CCCCc----------ccccceeecccccCCcE-EEEeC
Q 009719 423 HDWCEPFST---YPRTYDLIHVSGIESLIKNPG---SN----KNSCS----------LVDLMVEMDRMLRPEGT-VVVRD 481 (527)
Q Consensus 423 hdwce~fst---YPrtyDLiHa~~~fs~~~~~~---~~----~~rC~----------~~~illEmDRILRP~G~-~iird 481 (527)
.|..+++.. .+.+||+|-++--|....... .+ ..... +..++-++-|+|+|||+ +++.-
T Consensus 86 ~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 86 ADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp HHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred cchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 344443321 237899999865443211000 00 00011 16788899999999999 77765
Q ss_pred CHHHHHHHHHHHh--cCCceeEEecCCCCCCCCceEEEEEec
Q 009719 482 SPEVIDKVSRIAN--TVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 482 ~~~~~~~i~~i~~--~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
.......+.+++. .-.|.....-. ...+.+++++++|+
T Consensus 166 ~~~~~~~~~~~l~~~~~gf~~~~~~~--~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 166 GHNQADEVARLFAPWRERGFRVRKVK--DLRGIDRVIAVTRE 205 (215)
T ss_dssp TTSCHHHHHHHTGGGGGGTEECCEEE--CTTSCEEEEEEEEC
T ss_pred CCccHHHHHHHHHHhhcCCceEEEEE--ecCCCEEEEEEEEc
Confidence 5555566777776 55564322211 12235789998875
No 178
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.75 E-value=7.2e-06 Score=76.64 Aligned_cols=111 Identities=12% Similarity=0.131 Sum_probs=75.0
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCC-CCchhHhhhccccccccccCCCCCCCCCccchhhhcCccccccCCCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARK-SSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGS 453 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~-~ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~ 453 (527)
.+|||+|||.|.++..|... . -.|. +..+..+-++++--+..|. +.++.-+.+||+|.+..++....
T Consensus 49 ~~vLDiG~G~G~~~~~l~~~--~-----~vD~s~~~~~~a~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~---- 116 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKIK--I-----GVEPSERMAEIARKRGVFVLKGTA-ENLPLKDESFDFALMVTTICFVD---- 116 (219)
T ss_dssp SCEEEETCTTSTTHHHHTCC--E-----EEESCHHHHHHHHHTTCEEEECBT-TBCCSCTTCEEEEEEESCGGGSS----
T ss_pred CcEEEeCCCCCHHHHHHHHH--h-----ccCCCHHHHHHHHhcCCEEEEccc-ccCCCCCCCeeEEEEcchHhhcc----
Confidence 58999999999999999887 1 1222 2455556665532222222 22332236999999998877543
Q ss_pred CCCCCcccccceeecccccCCcEEEEeCCH------------------------HHHHHHHHHHhcCCceeEE
Q 009719 454 NKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------------------------EVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 454 ~~~rC~~~~illEmDRILRP~G~~iird~~------------------------~~~~~i~~i~~~l~W~~~~ 502 (527)
+...+|-++-|+|+|||.+++.+.. -..++++++++..-++...
T Consensus 117 -----~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~ 184 (219)
T 1vlm_A 117 -----DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFK 184 (219)
T ss_dssp -----CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred -----CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEE
Confidence 2467999999999999999997311 1246677788877777643
No 179
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.75 E-value=0.0001 Score=65.38 Aligned_cols=108 Identities=9% Similarity=0.002 Sum_probs=70.5
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
|.++..|...+..+.. .|.++.+++.|+++ ++ ...+..+|... ++++++||+|+|..+ .....++.
T Consensus 47 G~~~~~l~~~~~~v~~---vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~-----~~~~~~l~ 117 (183)
T 2yxd_A 47 GGMTVEIAKRCKFVYA---IDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT-----KNIEKIIE 117 (183)
T ss_dssp SHHHHHHHTTSSEEEE---EECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC-----SCHHHHHH
T ss_pred CHHHHHHHhcCCeEEE---EeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc-----ccHHHHHH
Confidence 4444445554433333 36778888888765 44 35667778766 888899999999877 23334999
Q ss_pred HHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeeecceE
Q 009719 219 EVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTV 268 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~ 268 (527)
++.|+ |||+++++.+. ......+.+..+...|+.......+.
T Consensus 118 ~~~~~--~gG~l~~~~~~------~~~~~~~~~~l~~~g~~~~~~~~~~~ 159 (183)
T 2yxd_A 118 ILDKK--KINHIVANTIV------LENAAKIINEFESRGYNVDAVNVFIS 159 (183)
T ss_dssp HHHHT--TCCEEEEEESC------HHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred HHhhC--CCCEEEEEecc------cccHHHHHHHHHHcCCeEEEEEeeee
Confidence 99999 99999999862 12233455555666666655443333
No 180
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.75 E-value=2.1e-05 Score=73.39 Aligned_cols=90 Identities=12% Similarity=0.034 Sum_probs=62.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccC-CCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
+|.++..++.++.. .+...|.++.+++.|+++ ++ .+.+.++|+.. +|+++++||+|++...+ |.... ..+
T Consensus 65 ~G~~~~~l~~~~~~--~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~-~~~~~-~~~ 140 (202)
T 2fpo_A 65 SGALGLEALSRYAA--GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF-RRGLL-EET 140 (202)
T ss_dssp TCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS-STTTH-HHH
T ss_pred cCHHHHHHHhcCCC--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC-CCCcH-HHH
Confidence 34455555666542 334448888999988764 44 45677788766 78888999999998663 44333 348
Q ss_pred HHHHhh--cccCCcEEEEecCC
Q 009719 217 LIEVDR--LLRPGGYLVISGPP 236 (527)
Q Consensus 217 L~Ei~R--VLRPGG~lviS~pp 236 (527)
+.++.+ +|||||+++++..+
T Consensus 141 l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 141 INLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp HHHHHHTTCEEEEEEEEEEEEG
T ss_pred HHHHHhcCccCCCcEEEEEECC
Confidence 888854 79999999998764
No 181
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.75 E-value=1.8e-05 Score=79.60 Aligned_cols=69 Identities=20% Similarity=0.256 Sum_probs=51.8
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|. +.+++.|+++ ++ .+.+..+|... +++.+ ||+|+++.+++||.+.. ..+|+++.|+|||||++++..+
T Consensus 214 D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 214 EM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPRK-ADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp EC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSSC-EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCCC-ccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 44 4566666543 44 35667777644 45544 99999999999998764 3599999999999999999865
No 182
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.75 E-value=9.5e-06 Score=81.93 Aligned_cols=67 Identities=13% Similarity=0.021 Sum_probs=52.9
Q ss_pred cChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccC---CcEEEEecC
Q 009719 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRP---GGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRP---GG~lviS~p 235 (527)
|. +.+++.|++.. .+.+..+|... |+|+ ||+|+++.+++||.+.. ..+|+++.|+||| ||++++..+
T Consensus 219 D~-~~~~~~a~~~~-~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 219 DR-PQVVENLSGSN-NLTYVGGDMFT-SIPN--ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp EC-HHHHTTCCCBT-TEEEEECCTTT-CCCC--CSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred eC-HHHHhhcccCC-CcEEEeccccC-CCCC--ccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 66 67887776532 25667778755 6764 99999999999998765 1499999999999 999999875
No 183
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=97.74 E-value=9.5e-06 Score=78.68 Aligned_cols=95 Identities=13% Similarity=0.110 Sum_probs=64.6
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhhc----cc---cccc-cccCCCCC-CCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDR----GL---IGVY-HDWCEPFS-TYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~eR----GL---iG~~-hdwce~fs-tYPrtyDLiHa~~~f 445 (527)
..|||+|||.|.++..|.....-|.-|=+. +..+..+-++ |+ +-++ .|.. .++ ..+.+||+|.+..++
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGHQVILCDLS--AQMIDRAKQAAEAKGVSDNMQFIHCAAQ-DVASHLETPVDLILFHAVL 146 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHC-CCGGGEEEEESCGG-GTGGGCSSCEEEEEEESCG
T ss_pred CEEEEeCCcchHHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCCcceEEEEcCHH-HhhhhcCCCceEEEECchh
Confidence 579999999999999998775533333221 2444444443 43 1122 2322 233 234899999999988
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.... +...+|-|+-|+|+|||.+++.+
T Consensus 147 ~~~~---------~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 147 EWVA---------DPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp GGCS---------CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hccc---------CHHHHHHHHHHHcCCCeEEEEEE
Confidence 8653 23679999999999999999975
No 184
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.74 E-value=8.7e-06 Score=75.34 Aligned_cols=117 Identities=18% Similarity=0.230 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----c--cccccccc
Q 009719 353 RWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----G--LIGVYHDW 425 (527)
Q Consensus 353 ~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----G--LiG~~hdw 425 (527)
.+..+.....+.+...+.. -.+|||+|||.|.++..|....- +|+-+|-. ..+..+-++ | +--+..|.
T Consensus 20 ~~~~~~~~~~~~l~~~~~~--~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~ 94 (227)
T 1ve3_A 20 EYRSRIETLEPLLMKYMKK--RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA 94 (227)
T ss_dssp HHHHHHHHHHHHHHHSCCS--CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT
T ss_pred HHHHHHHHHHHHHHHhcCC--CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECch
Confidence 4445555555555444444 45899999999999998866543 33333332 444444333 1 11122333
Q ss_pred CCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 426 CEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 426 ce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
.+ ++.-+.+||+|.+..++..+. .-+...+|-++-|+|+|||.+++.+.
T Consensus 95 ~~-~~~~~~~~D~v~~~~~~~~~~-------~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 95 RK-LSFEDKTFDYVIFIDSIVHFE-------PLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp TS-CCSCTTCEEEEEEESCGGGCC-------HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hc-CCCCCCcEEEEEEcCchHhCC-------HHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 32 221137999999988744332 12346789999999999999999864
No 185
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.73 E-value=2.5e-05 Score=74.29 Aligned_cols=83 Identities=14% Similarity=0.207 Sum_probs=59.6
Q ss_pred hhccccccccC---CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh
Q 009719 143 VASFGGSMLSE---NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN 213 (527)
Q Consensus 143 vgsfga~Ll~r---~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~ 213 (527)
.|.++.+|... +..+..+ |.++.+++.|+++ |++ ..+..+|... ++++++||+|++. .++..
T Consensus 104 ~G~~~~~l~~~~~~~~~v~~~---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~D~v~~~-----~~~~~ 174 (255)
T 3mb5_A 104 SGALTLFLANIVGPEGRVVSY---EIREDFAKLAWENIKWAGFDDRVTIKLKDIYE-GIEEENVDHVILD-----LPQPE 174 (255)
T ss_dssp TSHHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG-CCCCCSEEEEEEC-----SSCGG
T ss_pred chHHHHHHHHHhCCCeEEEEE---ecCHHHHHHHHHHHHHcCCCCceEEEECchhh-ccCCCCcCEEEEC-----CCCHH
Confidence 34444455544 4433344 7788888888765 554 5667778764 4889999999973 34444
Q ss_pred HHHHHHHhhcccCCcEEEEecC
Q 009719 214 ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 214 ~~aL~Ei~RVLRPGG~lviS~p 235 (527)
. ++.++.|+|||||++++..+
T Consensus 175 ~-~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 175 R-VVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp G-GHHHHHHHEEEEEEEEEEES
T ss_pred H-HHHHHHHHcCCCCEEEEEEC
Confidence 4 99999999999999999876
No 186
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.72 E-value=4.2e-06 Score=79.33 Aligned_cols=93 Identities=17% Similarity=0.188 Sum_probs=62.3
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----cccc----ccccccCCCCCCCCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGLI----GVYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGLi----G~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
..|||+|||.|.++..|... +. .|+-+|-. ..+..+-+ .|+- -+..|. +.++.-+.+||+|++..+
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKG---QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEGA 123 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCS---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEESC
T ss_pred CeEEEeCCCCCHHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecCh
Confidence 48999999999999888654 22 23333322 44444333 3432 123343 333322389999999987
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+... +...+|-|+-|+|||||++++.+
T Consensus 124 l~~~----------~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 124 IYNI----------GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp SCCC----------CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred Hhhc----------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 7643 35789999999999999999985
No 187
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.72 E-value=1.1e-05 Score=77.23 Aligned_cols=86 Identities=15% Similarity=0.225 Sum_probs=51.6
Q ss_pred hccccccc--cCCeeEEeeccCcCh-HHHHHHH---HH----cCCC-cEEeeccccCCCCCCCcccEEEecCccccccc-
Q 009719 144 ASFGGSML--SENILTLSFAPRDSH-KAQIQFA---LE----RGIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA- 211 (527)
Q Consensus 144 gsfga~Ll--~r~V~~msiAp~D~s-eaqvq~A---~e----Rg~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d- 211 (527)
|.++.+|. ..+..++.+ |.+ ++|++.| ++ .+++ +.+.+++++.||. ..||.|.+..+..+|+.
T Consensus 36 G~~~~~la~~~~~~~v~Gv---D~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~--~~~d~v~~i~~~~~~~~~ 110 (225)
T 3p2e_A 36 GRNIYKLAINDQNTFYIGI---DPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPF--ELKNIADSISILFPWGTL 110 (225)
T ss_dssp SHHHHHHHHTCTTEEEEEE---CSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCG--GGTTCEEEEEEESCCHHH
T ss_pred cHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhh--hccCeEEEEEEeCCCcHH
Confidence 44444554 344433333 666 6677666 43 2454 5677889999864 23344444333333332
Q ss_pred ------ChHHHHHHHhhcccCCcEEEEec
Q 009719 212 ------YNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 212 ------~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
+...+|.|+.|+|||||+|++..
T Consensus 111 ~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 111 LEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp HHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 22238999999999999999943
No 188
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.72 E-value=3.1e-05 Score=73.33 Aligned_cols=67 Identities=10% Similarity=0.067 Sum_probs=45.1
Q ss_pred cChHHH----HHHHHHcCCCcEEeeccccC----CCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQ----IQFALERGIPAFVAMLGTRR----LPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaq----vq~A~eRg~pa~~~v~dae~----LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.| ++.|+++ ....+.++|+.. +|++ ++||+|+|.. ..| +....+|.|+.|+|||||+|+++.+
T Consensus 88 D~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~-~~~--~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 88 EYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQDI-AQK--NQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp CCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEECC-CST--THHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEec-cCh--hHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 555554 4555544 234555667655 4666 8999999973 222 2233469999999999999999853
No 189
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.72 E-value=5.3e-06 Score=79.72 Aligned_cols=95 Identities=19% Similarity=0.190 Sum_probs=63.7
Q ss_pred eeeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHhhhc----ccc---c-cccccCCCCCCCCCccchhhhcCc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVIYDR----GLI---G-VYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi~eR----GLi---G-~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
-.+|||+|||.|.++..|.+.+- -|.-|=+. +..+..+-++ |+- - +..|+ +.++.-+.+||+|.+..+
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVTGQVTGLDFL--SGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCSSEEEEEESC--HHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESSC
T ss_pred CCEEEEeCCCCCHHHHHHHhccCCEEEEEeCC--HHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcCC
Confidence 45899999999999999987743 33333221 2444444333 431 1 22333 233322479999999988
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+... +...+|-++-|+|+|||++++.+
T Consensus 124 ~~~~----------~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 124 IYNI----------GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp GGGT----------CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ceec----------CHHHHHHHHHHHcCCCCEEEEEE
Confidence 8643 35789999999999999999975
No 190
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.71 E-value=4.2e-05 Score=77.91 Aligned_cols=86 Identities=12% Similarity=0.130 Sum_probs=58.2
Q ss_pred hccccccccCCe-eEEeeccCcChHHHHHHHHH----cCCC--cEEeeccccCCCCCCCcccEEEecCccc--ccccChH
Q 009719 144 ASFGGSMLSENI-LTLSFAPRDSHKAQIQFALE----RGIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLI--PFTAYNA 214 (527)
Q Consensus 144 gsfga~Ll~r~V-~~msiAp~D~seaqvq~A~e----Rg~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~--hw~d~~~ 214 (527)
|.++..+..++. .+..+ |.++ +++.|++ .+.. +.+..++.+.+|+++++||+|+|..+.. +......
T Consensus 78 G~~~~~la~~g~~~v~gv---D~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~ 153 (349)
T 3q7e_A 78 GILCMFAAKAGARKVIGI---ECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLN 153 (349)
T ss_dssp SHHHHHHHHTTCSEEEEE---ECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHH
T ss_pred hHHHHHHHHCCCCEEEEE---CcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccccccCchhHH
Confidence 444444555543 23333 4452 6666654 3554 6788899999999999999999965432 2334444
Q ss_pred HHHHHHhhcccCCcEEEEe
Q 009719 215 TYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS 233 (527)
.++.++.|+|||||+++.+
T Consensus 154 ~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 154 TVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp HHHHHHHHHEEEEEEEESC
T ss_pred HHHHHHHHhCCCCCEEccc
Confidence 5999999999999999854
No 191
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.71 E-value=1.1e-05 Score=74.57 Aligned_cols=131 Identities=13% Similarity=0.051 Sum_probs=82.3
Q ss_pred eeEeecCCCccchhhhccCCC---eeEEEecCCCCC-CchhHhhhc----cc--c-ccccccCCCCCCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSDP---VWVMNVVPARKS-STLSVIYDR----GL--I-GVYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~---VwvMnvvp~~~~-ntl~vi~eR----GL--i-G~~hdwce~fstYPrtyDLiHa~~ 443 (527)
.+|||+|||.|.++.+|...- .-|.- +|.. ..+..+-++ |+ + =+..|.. .++.-..+||+|.+..
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~~v~~---vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKGKVYA---IDVQEEMVNYAWEKVNKLGLKNVEVLKSEEN-KIPLPDNTVDFIFMAF 114 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTCEEEE---EESCHHHHHHHHHHHHHHTCTTEEEEECBTT-BCSSCSSCEEEEEEES
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCcEEEE---EECCHHHHHHHHHHHHHcCCCcEEEEecccc-cCCCCCCCeeEEEeeh
Confidence 489999999999999885432 22222 2222 334433333 32 1 1222322 2222237899999998
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-------------HHHHHHHHHHHhcCCceeEEecCCCCCC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-------------PEVIDKVSRIANTVRWTAAVHDKEPGSN 510 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-------------~~~~~~i~~i~~~l~W~~~~~~~e~~~~ 510 (527)
++..+. +...+|-|+-|+|+|||.+++.+- .-..++++++++..-++......- +
T Consensus 115 ~l~~~~---------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-~-- 182 (219)
T 3dh0_A 115 TFHELS---------EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEV-G-- 182 (219)
T ss_dssp CGGGCS---------SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEE-T--
T ss_pred hhhhcC---------CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEee-C--
Confidence 887653 246789999999999999999741 112577888888888886543211 1
Q ss_pred CCceEEEEEec
Q 009719 511 GREKILVATKS 521 (527)
Q Consensus 511 ~~ekiLi~~K~ 521 (527)
....+++++|+
T Consensus 183 ~~~~~~~~~k~ 193 (219)
T 3dh0_A 183 KYCFGVYAMIV 193 (219)
T ss_dssp TTEEEEEEECC
T ss_pred CceEEEEEEec
Confidence 24567777775
No 192
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.71 E-value=1.6e-05 Score=73.23 Aligned_cols=93 Identities=22% Similarity=0.245 Sum_probs=61.2
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc--cccccccccCCCCCCCCCccchhhhcCccccccC
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR--GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKN 450 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR--GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~ 450 (527)
-.+|||+|||.|.++..| ... +|+-+|.. ..+..+-++ ++--+..|. +.++.-+.+||+|.+..++....
T Consensus 37 ~~~vLdiG~G~G~~~~~l-~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~- 109 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL-PYP----QKVGVEPSEAMLAVGRRRAPEATWVRAWG-EALPFPGESFDVVLLFTTLEFVE- 109 (211)
T ss_dssp CSEEEEETCTTCHHHHHC-CCS----EEEEECCCHHHHHHHHHHCTTSEEECCCT-TSCCSCSSCEEEEEEESCTTTCS-
T ss_pred CCeEEEECCCCCHhHHhC-CCC----eEEEEeCCHHHHHHHHHhCCCcEEEEccc-ccCCCCCCcEEEEEEcChhhhcC-
Confidence 458999999999999998 220 22233333 445555554 221122222 22332237999999998877542
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+...+|-|+-|+|+|||.+++.+
T Consensus 110 --------~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 110 --------DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp --------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------CHHHHHHHHHHHcCCCCEEEEEe
Confidence 35789999999999999999985
No 193
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.71 E-value=2.6e-05 Score=72.98 Aligned_cols=141 Identities=11% Similarity=0.040 Sum_probs=83.1
Q ss_pred eeEeecCCC-ccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----ccc-cccc-cccCCCCCCCC-CccchhhhcCc
Q 009719 375 RNIMDMNAF-FGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGL-IGVY-HDWCEPFSTYP-RTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag-~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGL-iG~~-hdwce~fstYP-rtyDLiHa~~~ 444 (527)
.+|||+||| .|.++.+|... .. +|+-+|.. ..+..+-+ .|+ +-++ .|+ +.+..+| .+||+|-++-.
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFFNC---KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG-GIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS-CSSTTTCCSCEEEEEECCC
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc-hhhhhcccCceeEEEECCC
Confidence 579999999 99999888655 22 22333322 33333322 243 2222 232 1233344 89999998755
Q ss_pred cccccCCCC----------CCCCCcccccceeecccccCCcEEEEe--CCHHHHHHHHHHHhcCCceeEEecCCCCCCCC
Q 009719 445 ESLIKNPGS----------NKNSCSLVDLMVEMDRMLRPEGTVVVR--DSPEVIDKVSRIANTVRWTAAVHDKEPGSNGR 512 (527)
Q Consensus 445 fs~~~~~~~----------~~~rC~~~~illEmDRILRP~G~~iir--d~~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ 512 (527)
|....+... ......+..++-++-|+|+|||.+++- ...+...++.+.++...|++.......|. ..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g~-~~ 211 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVGT-RW 211 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCCC--C
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCCC-eE
Confidence 543210000 001111356888999999999999884 45567788888888889988776544333 23
Q ss_pred ceEEEEEe
Q 009719 513 EKILVATK 520 (527)
Q Consensus 513 ekiLi~~K 520 (527)
-.+|+.+|
T Consensus 212 ~~~l~f~~ 219 (230)
T 3evz_A 212 RHSLIFFK 219 (230)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 45666665
No 194
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.70 E-value=1.6e-06 Score=79.43 Aligned_cols=111 Identities=15% Similarity=0.111 Sum_probs=70.5
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-cccc-cccCCCCCCCC-CccchhhhcCcccc
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-IGVY-HDWCEPFSTYP-RTYDLIHVSGIESL 447 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-iG~~-hdwce~fstYP-rtyDLiHa~~~fs~ 447 (527)
+|||+|||.|.++.+|.+... +|+-.|.. ..+..+-++ |+ +-++ .|. +.++ +| .+||+|.+. +.+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~-~~~~~fD~v~~~--~~~ 104 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL-ADFD-IVADAWEGIVSI--FCH 104 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT-TTBS-CCTTTCSEEEEE--CCC
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh-hhcC-CCcCCccEEEEE--hhc
Confidence 899999999999999988764 44444443 445544444 33 1111 122 2222 33 799999984 322
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeCC----H-------------HHHHHHHHHHhcCCceeEE
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS----P-------------EVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~----~-------------~~~~~i~~i~~~l~W~~~~ 502 (527)
+ ..-....+|-++-|+|+|||.+++.+. . -..++++++++ -|++..
T Consensus 105 ~-------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~ 167 (202)
T 2kw5_A 105 L-------PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLI 167 (202)
T ss_dssp C-------CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEE
T ss_pred C-------CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEE
Confidence 2 112346789999999999999999841 0 12456777766 676643
No 195
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.69 E-value=7.4e-06 Score=73.17 Aligned_cols=112 Identities=17% Similarity=0.221 Sum_probs=71.4
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc---cc-cccccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL---IG-VYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL---iG-~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|+|+|||.|.++..|...-. +|+-.|.. ..+..+-+ .|+ +- ...|+.+.++.. .+||+|-++..+
T Consensus 35 ~~vldiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~ 110 (192)
T 1l3i_A 35 DVAVDVGCGTGGVTLELAGRVR---RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGSG 110 (192)
T ss_dssp CEEEEESCTTSHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCCT
T ss_pred CEEEEECCCCCHHHHHHHHhcC---EEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCch
Confidence 5899999999999988877652 33333332 33333333 232 11 122333322211 479999887554
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCceeEE
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~~~~ 502 (527)
.. +..+|-++-|+|+|||.+++.+ ..+...++.++++...|++..
T Consensus 111 ~~------------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 111 GE------------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp TC------------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEE
T ss_pred HH------------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEE
Confidence 32 3678999999999999999976 456677777877776665543
No 196
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.69 E-value=1.6e-05 Score=77.71 Aligned_cols=98 Identities=10% Similarity=0.090 Sum_probs=63.5
Q ss_pred CCeeeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhhhc----cc-cc-cccccCCCCCCCCCccchhhhc
Q 009719 372 PAIRNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIYDR----GL-IG-VYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~eR----GL-iG-~~hdwce~fstYPrtyDLiHa~ 442 (527)
..-.+|||+|||.|.++..|.+. ..-|.-|=+ .+..+..+-++ |+ +- ...|.. .++ ++.+||+||+.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~--s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~v~~~ 96 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDS--GETLLAEARELFRLLPYDSEFLEGDAT-EIE-LNDKYDIAICH 96 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEES--CHHHHHHHHHHHHSSSSEEEEEESCTT-TCC-CSSCEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHhcCCceEEEEcchh-hcC-cCCCeeEEEEC
Confidence 34568999999999999999765 233332221 11333333222 21 11 222333 233 47899999999
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
.++.... +...+|-|+-|+|+|||++++.+.
T Consensus 97 ~~l~~~~---------~~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 97 AFLLHMT---------TPETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp SCGGGCS---------SHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ChhhcCC---------CHHHHHHHHHHHcCCCCEEEEEec
Confidence 8887653 236899999999999999998753
No 197
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.68 E-value=8.2e-06 Score=76.34 Aligned_cols=94 Identities=16% Similarity=0.230 Sum_probs=61.0
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-cc-cccccCCCCCCCCCccchhhhcC-ccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-IG-VYHDWCEPFSTYPRTYDLIHVSG-IES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-iG-~~hdwce~fstYPrtyDLiHa~~-~fs 446 (527)
.+|||+|||.|.++..|.+. . +|+-+|.. ..+..+-++ |. +- +..|..+ ++ .+.+||+|-+.. ++.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~-~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH-Y---EVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE-LE-LPEPVDAITILCDSLN 108 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT-S---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG-CC-CSSCEEEEEECTTGGG
T ss_pred CeEEEecCCCCHHHHHHhhC-C---eEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh-cC-CCCCcCEEEEeCCchh
Confidence 68999999999999999887 2 44444433 444444443 21 11 1112221 22 458999999875 555
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
... +.-....+|-++-|+|+|||.+++.
T Consensus 109 ~~~------~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 109 YLQ------TEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GCC------SHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcC------CHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 442 2234567889999999999999983
No 198
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.67 E-value=9.8e-06 Score=76.93 Aligned_cols=101 Identities=16% Similarity=0.150 Sum_probs=66.4
Q ss_pred ccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----ccccccccCCCCCCCCCccchhhhc
Q 009719 368 KLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----LIGVYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 368 ~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----LiG~~hdwce~fstYPrtyDLiHa~ 442 (527)
.+....=.+|||+|||.|.++.+|.+...- +|+-+|-. ..+..+-++. +-=+..|. +.++.-+.+||+|.+.
T Consensus 39 ~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~ 115 (253)
T 3g5l_A 39 MLPDFNQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAI-EDIAIEPDAYNVVLSS 115 (253)
T ss_dssp TCCCCTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCG-GGCCCCTTCEEEEEEE
T ss_pred hhhccCCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcch-hhCCCCCCCeEEEEEc
Confidence 344334578999999999999999766431 23333332 4455554442 11112222 2233223899999999
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.++..+. +...+|-|+-|+|+|||.+++.
T Consensus 116 ~~l~~~~---------~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 116 LALHYIA---------SFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp SCGGGCS---------CHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhhhh---------hHHHHHHHHHHHcCCCcEEEEE
Confidence 9887653 2578999999999999999997
No 199
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.67 E-value=2.4e-05 Score=79.56 Aligned_cols=67 Identities=13% Similarity=0.152 Sum_probs=49.1
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecC---cccccccChHHHHHHHhhcccCCcEEEE
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSR---CLIPFTAYNATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~---~l~hw~d~~~~aL~Ei~RVLRPGG~lvi 232 (527)
|.++ +++.|+++ +. .+.+..++++.+++++++||+|+|.. ++.|- .....+|.++.|+|||||+++.
T Consensus 94 D~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 94 DQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFE-SMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp ESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTTBTTT-CHHHHHHHHHHHHEEEEEEEES
T ss_pred ChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhhccCH-HHHHHHHHHHHhhcCCCcEEEc
Confidence 4443 66666543 44 35677889999999999999999876 34332 2233499999999999999984
No 200
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.67 E-value=0.00022 Score=73.08 Aligned_cols=106 Identities=12% Similarity=0.048 Sum_probs=69.0
Q ss_pred CcChHHHHHHHHHc----CC-CcEEeeccccC-CCC-CCCcccEEEecCcccccccChHHHHHHHhhcccCCcE-EEEec
Q 009719 163 RDSHKAQIQFALER----GI-PAFVAMLGTRR-LPF-PAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGY-LVISG 234 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~-pa~~~v~dae~-LPF-pD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~-lviS~ 234 (527)
.|.++.+++.|+++ |+ .+.+..+|+.. ||. .+++||+|+++..+++. . ...+|.++.|+|||||+ ++++.
T Consensus 201 vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~-~-~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 201 LDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPETLE-A-IRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp ECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHH-H-HHHHHHHHHHTBCSTTCEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCCchH-H-HHHHHHHHHHHcccCCeEEEEEE
Confidence 37788999988765 55 46677888877 885 57899999998655333 2 24599999999999994 46665
Q ss_pred CCCCCCCchhHHHHHHHHHH-hcceEEeeeecceEEEeC
Q 009719 235 PPVQWPKQDKEWADLQAVAR-ALCYELIAVDGNTVIWKK 272 (527)
Q Consensus 235 pp~~~~~~~~~w~~i~~l~~-~mcW~~~~~~~~v~iwrK 272 (527)
.. .......|..+.++.. .+.++......++..|..
T Consensus 279 ~~--~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 315 (373)
T 2qm3_A 279 TR--RESSLDKWREIQKLLLNEFNVVITDIIRNFNEYVN 315 (373)
T ss_dssp CT--TTCCHHHHHHHHHHHHHTSCCEEEEEEEEEEEBCC
T ss_pred ec--CcCCHHHHHHHHHHHHHhcCcchhhhhhhhhhhcc
Confidence 42 1122234556666655 555554443344444443
No 201
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.67 E-value=1.1e-05 Score=73.74 Aligned_cols=139 Identities=14% Similarity=0.159 Sum_probs=75.4
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc-----cccccccccCCCCCCCC-CccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR-----GLIGVYHDWCEPFSTYP-RTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR-----GLiG~~hdwce~fstYP-rtyDLiHa~~~fs~ 447 (527)
.+|||+|||.|.++..|.+...- +|+-.|-. ..+..+-++ .+--+..|..+ ++ ++ .+||+|-+..+|..
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~-~~-~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK-LD-FPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS-CC-SCSSCEEEEEEESHHHH
T ss_pred CeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc-CC-CCCCcccEEEECcchhh
Confidence 47999999999999988665321 22222222 333333332 11112223322 22 33 78999998887754
Q ss_pred ccCCCCC------CCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHH--HhcCCceeEEecCCCCCCCCceEEEEE
Q 009719 448 IKNPGSN------KNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRI--ANTVRWTAAVHDKEPGSNGREKILVAT 519 (527)
Q Consensus 448 ~~~~~~~------~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i--~~~l~W~~~~~~~e~~~~~~ekiLi~~ 519 (527)
....... .+.-....+|-|+-|+|+|||.+++.+-...- ..+.+ .....|+......+++. .-.+.+++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 196 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPH-FRTRHYAQAYYGWSLRHATYGSGF--HFHLYLMH 196 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHH-HHHHHHCCGGGCEEEEEEEESGGG--CEEEEEEE
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcH-HHHHHHhccccCcEEEEEEecCcc--eEEEEEEE
Confidence 3200000 00113468899999999999999998743211 11223 33456876554333222 22455565
Q ss_pred e
Q 009719 520 K 520 (527)
Q Consensus 520 K 520 (527)
|
T Consensus 197 ~ 197 (215)
T 2pxx_A 197 K 197 (215)
T ss_dssp E
T ss_pred e
Confidence 5
No 202
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.65 E-value=5.4e-06 Score=77.65 Aligned_cols=96 Identities=17% Similarity=0.214 Sum_probs=60.7
Q ss_pred eeeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhc-----cccccccccCCCCCCCCCccchhhhcCcc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDR-----GLIGVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eR-----GLiG~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
=.+|||+|||.|.++.+|.+. ..-|.- .|-. ..+..+-++ .+--+..|.. .++ ++.+||+|.+..++
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~---vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l 119 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPEATFTL---VDMSEKMLEIAKNRFRGNLKVKYIEADYS-KYD-FEEKYDMVVSALSI 119 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTTCEEEE---EESCHHHHHHHHHHTCSCTTEEEEESCTT-TCC-CCSCEEEEEEESCG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCeEEE---EECCHHHHHHHHHhhccCCCEEEEeCchh-ccC-CCCCceEEEEeCcc
Confidence 368999999999999988655 332222 2222 344444433 1111222222 222 34899999999888
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..+. + -....+|-|+-|+|+|||.+++.+
T Consensus 120 ~~~~------~-~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 120 HHLE------D-EDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GGSC------H-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCC------H-HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 7653 1 111248999999999999999976
No 203
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.65 E-value=5.6e-05 Score=68.63 Aligned_cols=133 Identities=11% Similarity=0.032 Sum_probs=80.5
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhccccccccccCCCCCCCCCccchhhhcCccccccCCCCC
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSN 454 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~ 454 (527)
.|||+|||.|.++.+|.... +|+-+|-. ..+.. ...+--+..|..+++. +.+||+|-++..|....++...
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~~~~~~~~~d~~~~~~--~~~fD~i~~n~~~~~~~~~~~~ 97 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--HRGGNLVRADLLCSIN--QESVDVVVFNPPYVPDTDDPII 97 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--CSSSCEEECSTTTTBC--GGGCSEEEECCCCBTTCCCTTT
T ss_pred eEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--ccCCeEEECChhhhcc--cCCCCEEEECCCCccCCccccc
Confidence 89999999999999998876 55545443 33333 2222223334444332 2899999998776643210000
Q ss_pred CCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCceeEEecCCCCCCCCceEEEEE
Q 009719 455 KNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVAT 519 (527)
Q Consensus 455 ~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~ 519 (527)
........++-++=|.| |||.+++.. .....+++.++++...|+.......... .|++++.+
T Consensus 98 ~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~--~e~~~~~~ 160 (170)
T 3q87_B 98 GGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKIL--GETVYIIK 160 (170)
T ss_dssp BCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECS--SSEEEEEE
T ss_pred cCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccC--CceEEEEE
Confidence 01112234555666666 999999975 3345677888888888887655333222 45666554
No 204
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.63 E-value=7.6e-05 Score=72.00 Aligned_cols=92 Identities=12% Similarity=0.113 Sum_probs=61.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCC--CCCCcccEEEecCccccc-----
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLP--FPAFSFDIVHCSRCLIPF----- 209 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LP--FpD~SFDlV~cs~~l~hw----- 209 (527)
.|.++..|..++.. .+...|.++.+++.|+++ ++. +.+..+|...++ +++++||+|+|+-...+.
T Consensus 60 ~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~ 137 (259)
T 3lpm_A 60 NGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSL 137 (259)
T ss_dssp TTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC--------
T ss_pred hhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccC
Confidence 44455555555432 344447788888888764 443 567778887775 678999999996433221
Q ss_pred c--------------cChHHHHHHHhhcccCCcEEEEecCC
Q 009719 210 T--------------AYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 210 ~--------------d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
. .....++.++.|+|||||+|++..++
T Consensus 138 ~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 138 KNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp ---------------HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 0 01124899999999999999997764
No 205
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.63 E-value=4.4e-05 Score=77.13 Aligned_cols=129 Identities=16% Similarity=0.130 Sum_probs=81.1
Q ss_pred eeEeecCCCccchhhhccCCCe-eEEEecCCCC-CCchhHhhhc--ccc---c-cccccCCCCCCCC-CccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPV-WVMNVVPARK-SSTLSVIYDR--GLI---G-VYHDWCEPFSTYP-RTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~-~ntl~vi~eR--GLi---G-~~hdwce~fstYP-rtyDLiHa~~~f 445 (527)
++|||+|||+|+|+..|...+. -| +-+|- +++|.....+ .++ . -..... ....| .+||++-++-.|
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga~~V---~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~--~~~l~~~~fD~v~~d~sf 161 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGAKLV---YAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAE--PVDFTEGLPSFASIDVSF 161 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEE---EEECSSSSCSCHHHHTCTTEEEECSCCGGGCC--GGGCTTCCCSEEEECCSS
T ss_pred cEEEecCCCccHHHHHHHhCCCCEE---EEEECCHHHHHHHHHhCcccceecccCceecc--hhhCCCCCCCEEEEEeeH
Confidence 5899999999999988876643 23 33343 3666553331 111 0 011111 11234 459999998777
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC----------------------CHHHHHHHHHHHhcCCceeEEe
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD----------------------SPEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird----------------------~~~~~~~i~~i~~~l~W~~~~~ 503 (527)
.. +..+|-|+-|+|+|||.+++-- ....++++.+++...-|.+...
T Consensus 162 ~s------------l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~ 229 (291)
T 3hp7_A 162 IS------------LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGL 229 (291)
T ss_dssp SC------------GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred hh------------HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 63 3679999999999999998851 0136778888888999987644
Q ss_pred cC--CCCCCC-CceEEEEEe
Q 009719 504 DK--EPGSNG-REKILVATK 520 (527)
Q Consensus 504 ~~--e~~~~~-~ekiLi~~K 520 (527)
.. ..|+.+ .|-++.++|
T Consensus 230 ~~spi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 230 DFSPIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp EECSSCCGGGCCCEEEEEEE
T ss_pred EECCCCCCCcCHHHHHHhhh
Confidence 32 224443 455665655
No 206
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.61 E-value=1.7e-05 Score=69.96 Aligned_cols=89 Identities=20% Similarity=0.202 Sum_probs=60.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccC-CCC-C--CCcccEEEecCcccccccChH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRR-LPF-P--AFSFDIVHCSRCLIPFTAYNA 214 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~-LPF-p--D~SFDlV~cs~~l~hw~d~~~ 214 (527)
.|.++.+|..++.. +...|.++.+++.|+++ +..+.+..+|+.. ++. + +++||+|++...++ .....
T Consensus 52 ~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~--~~~~~ 126 (171)
T 1ws6_A 52 SGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA--MDLAA 126 (171)
T ss_dssp SCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT--SCTTH
T ss_pred cCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCCc--hhHHH
Confidence 44555556666554 33447788899888764 3456677777655 442 2 34899999987653 33333
Q ss_pred HHHHHHh--hcccCCcEEEEecCCC
Q 009719 215 TYLIEVD--RLLRPGGYLVISGPPV 237 (527)
Q Consensus 215 ~aL~Ei~--RVLRPGG~lviS~pp~ 237 (527)
++.++. |+|||||+++++.++.
T Consensus 127 -~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 127 -LFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp -HHHHHHHHTCEEEEEEEEEEEETT
T ss_pred -HHHHHHhhcccCCCcEEEEEeCCc
Confidence 777777 9999999999988743
No 207
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.61 E-value=9.2e-06 Score=79.64 Aligned_cols=94 Identities=10% Similarity=0.046 Sum_probs=60.9
Q ss_pred CeeeEeecCCCccchhhhcc---CCCeeEEEecCCCCCCchhHhhhc-----cccc---c-ccccCCCCCCCC------C
Q 009719 373 AIRNIMDMNAFFGGFAAALT---SDPVWVMNVVPARKSSTLSVIYDR-----GLIG---V-YHDWCEPFSTYP------R 434 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~---~~~VwvMnvvp~~~~ntl~vi~eR-----GLiG---~-~hdwce~fstYP------r 434 (527)
.-.+|||+|||.|.++..|. ....-|.-|=+. +..+..+-++ |... . ..|.. .++.-. .
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLS--ATMIKTAEVIKEGSPDTYKNVSFKISSSD-DFKFLGADSVDKQ 112 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESC--HHHHHHHHHHHHHCC-CCTTEEEEECCTT-CCGGGCTTTTTSS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCC--HHHHHHHHHHHHhccCCCCceEEEEcCHH-hCCccccccccCC
Confidence 45789999999999999998 444433333221 2444544443 2211 1 12222 222112 6
Q ss_pred ccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 435 TYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 435 tyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
+||+|++..++.. - +...+|-|+-|+|||||.+++
T Consensus 113 ~fD~V~~~~~l~~---------~-~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHW---------F-DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGG---------S-CHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHH---------h-CHHHHHHHHHHhcCCCcEEEE
Confidence 9999999887763 2 567899999999999999998
No 208
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.61 E-value=3.1e-05 Score=79.19 Aligned_cols=67 Identities=13% Similarity=-0.054 Sum_probs=52.6
Q ss_pred cChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccChH-HHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPGG~lviS~p 235 (527)
|. +.+++.|+++ ..+.+..+|... |+|++ |+|+++.++|||.+... .+|+++.|+|||||+|++...
T Consensus 234 D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 234 DL-PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp EC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred eh-HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 55 5677666543 235677788766 88865 99999999999987653 589999999999999999764
No 209
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.60 E-value=4.9e-05 Score=70.54 Aligned_cols=119 Identities=14% Similarity=0.165 Sum_probs=72.8
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc----cc-------cc-cccccCCCCCCCCCccchhh
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR----GL-------IG-VYHDWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR----GL-------iG-~~hdwce~fstYPrtyDLiH 440 (527)
.+|||+|||.|.|+.+|.+. +.. +|+-+|-. ..+..+-++ |+ +- +..|. +..+.-+.+||+|-
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDSFFE--QITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL-TYQDKRFHGYDAAT 107 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCTTCS--EEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT-TSCCGGGCSCSEEE
T ss_pred CEEEEeCCCCCHHHHHHHhhCCCC--EEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc-ccccccCCCcCEEe
Confidence 58999999999999999764 211 22222322 444444433 21 11 11122 11111126899999
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHH----------------------HHH----HHHHHh
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEV----------------------IDK----VSRIAN 494 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~----------------------~~~----i~~i~~ 494 (527)
+..++..+. .-.+..+|-|+-|+|+|||.+++.+..+. -++ ++++++
T Consensus 108 ~~~~l~~~~-------~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (217)
T 3jwh_A 108 VIEVIEHLD-------LSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITE 180 (217)
T ss_dssp EESCGGGCC-------HHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHH
T ss_pred eHHHHHcCC-------HHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHH
Confidence 998887653 22345788899999999998888754321 122 337777
Q ss_pred cCCceeEEe
Q 009719 495 TVRWTAAVH 503 (527)
Q Consensus 495 ~l~W~~~~~ 503 (527)
.--+++...
T Consensus 181 ~~Gf~v~~~ 189 (217)
T 3jwh_A 181 RFAYNVQFQ 189 (217)
T ss_dssp HSSEEEEEC
T ss_pred HcCceEEEE
Confidence 778877665
No 210
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.59 E-value=3.4e-05 Score=77.16 Aligned_cols=66 Identities=11% Similarity=0.041 Sum_probs=53.2
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.+++.|+++ |++ +.+..+|...++.++++||+|++..+++|.. .++.|+|||||+++++..+
T Consensus 107 D~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~-------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 107 EYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP-------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp ESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSCCC-------HHHHHHEEEEEEEEEEBCB
T ss_pred ECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCCHHHHH-------HHHHHhcCCCcEEEEEECC
Confidence 6678888888765 544 5677788888776788999999999987765 5788999999999998753
No 211
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.59 E-value=1.5e-05 Score=84.37 Aligned_cols=95 Identities=20% Similarity=0.163 Sum_probs=64.0
Q ss_pred CeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCC------CCcccEEEecCcccccccChHHHHHHHhhcccCC
Q 009719 154 NILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFP------AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPG 227 (527)
Q Consensus 154 ~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFp------D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPG 227 (527)
.|+++++++. |. .....+.+.++|+..+||. +++||+|+|.. .+++.+. ..+|.|+.|+||||
T Consensus 249 ~V~GVDiSp~-----m~----~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~-~~aL~el~rvLKPG 317 (419)
T 3sso_A 249 QIYGLDIMDK-----SH----VDELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHV-RTSFAALFPHVRPG 317 (419)
T ss_dssp EEEEEESSCC-----GG----GCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHH-HHHHHHHGGGEEEE
T ss_pred EEEEEECCHH-----Hh----hcCCCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhH-HHHHHHHHHhcCCC
Confidence 4666666654 31 1233467888999999998 89999999874 4555443 45999999999999
Q ss_pred cEEEEecCC-CCCC---Cc-------hhHHHHHHHHHHhcceE
Q 009719 228 GYLVISGPP-VQWP---KQ-------DKEWADLQAVARALCYE 259 (527)
Q Consensus 228 G~lviS~pp-~~~~---~~-------~~~w~~i~~l~~~mcW~ 259 (527)
|+|++..-. .+|+ +. ...-+.++++.+.+.|.
T Consensus 318 GvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~ 360 (419)
T 3sso_A 318 GLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQ 360 (419)
T ss_dssp EEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGG
T ss_pred eEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhccc
Confidence 999997532 2221 11 12345566666666653
No 212
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.58 E-value=2.6e-05 Score=71.88 Aligned_cols=143 Identities=15% Similarity=0.125 Sum_probs=84.0
Q ss_pred cccCccccchhhHHHHHHHHHH-HHHhhhccCCCCeeeEeecCCCccchhhhccCCC--eeEEEecCCCCC-CchhHhhh
Q 009719 340 MKNGYDVFEADSRRWRRRVAYY-KNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDP--VWVMNVVPARKS-STLSVIYD 415 (527)
Q Consensus 340 ~g~~~~~f~~d~~~W~~~v~~Y-~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~--VwvMnvvp~~~~-ntl~vi~e 415 (527)
.|+..+.|..+...=++.+... .+.+. +.. -.+|||+|||.|.++..|.... .-| +-.|.. ..+..+-+
T Consensus 10 ~g~~d~~f~~~g~~~~~~i~~~~l~~l~--~~~--~~~vLDiG~G~G~~~~~la~~~~~~~v---~~vD~s~~~~~~a~~ 82 (204)
T 3e05_A 10 GIDDDEFATAKKLITKQEVRAVTLSKLR--LQD--DLVMWDIGAGSASVSIEASNLMPNGRI---FALERNPQYLGFIRD 82 (204)
T ss_dssp CCCGGGSCCCTTTSCCHHHHHHHHHHTT--CCT--TCEEEEETCTTCHHHHHHHHHCTTSEE---EEEECCHHHHHHHHH
T ss_pred CCCCcHHhccCCcCChHHHHHHHHHHcC--CCC--CCEEEEECCCCCHHHHHHHHHCCCCEE---EEEeCCHHHHHHHHH
Confidence 3555566766444422333221 12222 233 3589999999999998886542 222 222222 34444433
Q ss_pred c----cc--cc-cccccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHH
Q 009719 416 R----GL--IG-VYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVID 487 (527)
Q Consensus 416 R----GL--iG-~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~ 487 (527)
+ |+ +- +..|..+.+.. ..+||+|-++..+. .+..++-++-|+|+|||.+++.. ..+...
T Consensus 83 ~~~~~~~~~v~~~~~d~~~~~~~-~~~~D~i~~~~~~~------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 149 (204)
T 3e05_A 83 NLKKFVARNVTLVEAFAPEGLDD-LPDPDRVFIGGSGG------------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLT 149 (204)
T ss_dssp HHHHHTCTTEEEEECCTTTTCTT-SCCCSEEEESCCTT------------CHHHHHHHHHHHCCTTCEEEEEECBHHHHH
T ss_pred HHHHhCCCcEEEEeCChhhhhhc-CCCCCEEEECCCCc------------CHHHHHHHHHHhcCCCeEEEEEecccccHH
Confidence 2 43 11 12233333322 25799987764332 34679999999999999999985 456777
Q ss_pred HHHHHHhcCCceeEE
Q 009719 488 KVSRIANTVRWTAAV 502 (527)
Q Consensus 488 ~i~~i~~~l~W~~~~ 502 (527)
++.++++...|++..
T Consensus 150 ~~~~~l~~~g~~~~~ 164 (204)
T 3e05_A 150 KAVEFLEDHGYMVEV 164 (204)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHCCCceeE
Confidence 888888888776443
No 213
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.58 E-value=4.9e-05 Score=71.75 Aligned_cols=69 Identities=17% Similarity=0.214 Sum_probs=47.8
Q ss_pred cChHHH----HHHHHHcCCCcEEeeccccC---CCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 164 DSHKAQ----IQFALERGIPAFVAMLGTRR---LPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 164 D~seaq----vq~A~eRg~pa~~~v~dae~---LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.| ++.|.++ ..+.+..+|+.. +|+++++||+|+|... .++....++.++.|+|||||+++++..+
T Consensus 109 D~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 109 EFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADVA---QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp CCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 555444 4455544 345667777766 6778899999998644 1222233688999999999999997653
No 214
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.57 E-value=3.8e-05 Score=78.54 Aligned_cols=67 Identities=18% Similarity=0.025 Sum_probs=52.8
Q ss_pred cChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|. +.+++.|+++ ..+.+..+|... |+|++ |+|+++.++|||.+.. ..+|+++.|+|||||+|++...
T Consensus 232 D~-~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 232 DL-PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp EC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred cC-HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 55 5667666543 246677788777 88865 9999999999998664 3599999999999999999764
No 215
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.56 E-value=9.2e-06 Score=76.89 Aligned_cols=94 Identities=15% Similarity=0.103 Sum_probs=62.2
Q ss_pred CeeeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhhcc--ccccccccCCCCCCCCCccchhhhcCccc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYDRG--LIGVYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~eRG--LiG~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
.-.+|||+|||.|.++.+|.+. .|..+-+- +..+..+-++. +--...|. +.++ .+.+||+|++..++.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s----~~~~~~a~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~ 106 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSD----DDMLEKAADRLPNTNFGKADL-ATWK-PAQKADLLYANAVFQ 106 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESC----HHHHHHHHHHSTTSEEEECCT-TTCC-CSSCEEEEEEESCGG
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECC----HHHHHHHHHhCCCcEEEECCh-hhcC-ccCCcCEEEEeCchh
Confidence 3468999999999999888654 23332221 24455554441 11112222 2333 358999999988877
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
... +...+|-|+-|+|+|||++++..
T Consensus 107 ~~~---------~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 107 WVP---------DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp GST---------THHHHHHHHGGGEEEEEEEEEEE
T ss_pred hCC---------CHHHHHHHHHHhcCCCeEEEEEe
Confidence 542 35678999999999999999974
No 216
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.55 E-value=1.5e-05 Score=74.43 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=63.4
Q ss_pred CeeeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHhhhcc----ccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVIYDRG----LIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi~eRG----LiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
.-.+|||+|||.|.++..|.+.+. -|.-|-+. +..+..+-++. +--+..|..+ ++.-+.+||+|.+..++..
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLS--EKMLARARAAGPDTGITYERADLDK-LHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESC--HHHHHHHHHTSCSSSEEEEECCGGG-CCCCTTCEEEEEEESCGGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCC--HHHHHHHHHhcccCCceEEEcChhh-ccCCCCCceEEEEeccccc
Confidence 346899999999999999977654 23322221 24444444442 2112223222 3322479999999988775
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.. +...+|-|+-|+|+|||.+++..
T Consensus 120 ~~---------~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 120 VE---------DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CS---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc---------hHHHHHHHHHHhcCcCcEEEEEe
Confidence 42 35678999999999999999964
No 217
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.55 E-value=4e-05 Score=78.91 Aligned_cols=118 Identities=17% Similarity=0.192 Sum_probs=69.0
Q ss_pred HHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCe-eEEEecCCCCCC-chhHhhhccc---cccccccCCCCCC
Q 009719 357 RVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSS-TLSVIYDRGL---IGVYHDWCEPFST 431 (527)
Q Consensus 357 ~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~n-tl~vi~eRGL---iG~~hdwce~fst 431 (527)
+...|.+.|...+....=.+|||+|||.|.++..|.+... -|.-|=....-. ....+-+.|+ |-+++.=.+.+.
T Consensus 47 r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 125 (376)
T 3r0q_C 47 RMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS- 125 (376)
T ss_dssp HHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC-
T ss_pred HHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC-
Confidence 4455776664333223336899999999999888876643 343443331111 1222333454 233332223332
Q ss_pred CCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 432 YPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 432 YPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+|..||+|.+..+..... ..-.+..++-+++|+|+|||.+|+..
T Consensus 126 ~~~~~D~Iv~~~~~~~l~------~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 126 LPEKVDVIISEWMGYFLL------RESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp CSSCEEEEEECCCBTTBT------TTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred cCCcceEEEEcChhhccc------chHHHHHHHHHHHhhCCCCeEEEEec
Confidence 568999999965333221 11235678889999999999998863
No 218
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.55 E-value=4.8e-05 Score=78.33 Aligned_cols=87 Identities=11% Similarity=0.077 Sum_probs=57.8
Q ss_pred hccccccccCCe-eEEeeccCcChHHHHHHHHH----cCCC--cEEeeccccCCCCCCCcccEEEecCcccccc--cChH
Q 009719 144 ASFGGSMLSENI-LTLSFAPRDSHKAQIQFALE----RGIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFT--AYNA 214 (527)
Q Consensus 144 gsfga~Ll~r~V-~~msiAp~D~seaqvq~A~e----Rg~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~--d~~~ 214 (527)
|.++..+..++. .+..+ |.+ .|++.|++ .++. +.+..++++.++++ ++||+|+|....+... ....
T Consensus 75 G~ls~~la~~g~~~V~gv---D~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~ 149 (376)
T 3r0q_C 75 GILAIWSAQAGARKVYAV---EAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGYFLLRESMFD 149 (376)
T ss_dssp THHHHHHHHTTCSEEEEE---ESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBTTBTTTCTHH
T ss_pred CHHHHHHHhcCCCEEEEE---ccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhhcccchHHHH
Confidence 334444555554 33333 455 56666654 3554 57788999999998 9999999965432222 2334
Q ss_pred HHHHHHhhcccCCcEEEEecC
Q 009719 215 TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~p 235 (527)
.++.++.|+|||||+++++..
T Consensus 150 ~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 150 SVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp HHHHHHHHHEEEEEEEESSEE
T ss_pred HHHHHHHhhCCCCeEEEEecC
Confidence 489999999999999988653
No 219
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=97.55 E-value=5.7e-05 Score=75.67 Aligned_cols=68 Identities=21% Similarity=0.193 Sum_probs=51.3
Q ss_pred HHHHHHHHc----CCC--cEEeeccccCCC-CCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 168 AQIQFALER----GIP--AFVAMLGTRRLP-FPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 168 aqvq~A~eR----g~p--a~~~v~dae~LP-FpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+++.|+++ ++. +.+..+|....+ ++.+.||+|+|+.++|||.+.. ..+|+++.|+|||||+|++..+
T Consensus 213 ~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 213 TTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp GGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 455555543 443 567778877766 3456799999999999997652 3599999999999999999764
No 220
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.55 E-value=0.00015 Score=75.01 Aligned_cols=121 Identities=15% Similarity=0.080 Sum_probs=75.7
Q ss_pred hhccccccccC--CeeEEeeccCcChHHHHHHHHHc----CCC----cEEeeccccCCCCCCCcccEEEecCccccc---
Q 009719 143 VASFGGSMLSE--NILTLSFAPRDSHKAQIQFALER----GIP----AFVAMLGTRRLPFPAFSFDIVHCSRCLIPF--- 209 (527)
Q Consensus 143 vgsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eR----g~p----a~~~v~dae~LPFpD~SFDlV~cs~~l~hw--- 209 (527)
.|.++..+..+ +..+. ..|.++.+++.|+++ ++. +.+..+|... ++++++||+|+|.-.+++-
T Consensus 233 ~G~~s~~la~~~p~~~V~---gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~ 308 (375)
T 4dcm_A 233 NGVIGLTLLDKNPQAKVV---FVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHAL 308 (375)
T ss_dssp TCHHHHHHHHHCTTCEEE---EEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCCC------
T ss_pred chHHHHHHHHHCCCCEEE---EEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCCcccCccc
Confidence 44455555554 33333 337788888888764 432 4456677665 7888999999999876542
Q ss_pred ccCh-HHHHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeeecceEEEeCCC
Q 009719 210 TAYN-ATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVDGNTVIWKKPV 274 (527)
Q Consensus 210 ~d~~-~~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~~~v~iwrKp~ 274 (527)
.+.. ..+|.++.|+|||||+++++.+.. ..+.. .++++.. ..+.+.+.....|++-.-
T Consensus 309 ~~~~~~~~l~~~~~~LkpgG~l~iv~n~~---~~~~~--~l~~~fg--~~~~~a~~~~F~V~~~~~ 367 (375)
T 4dcm_A 309 TDNVAWEMFHHARRCLKINGELYIVANRH---LDYFH--KLKKIFG--NCTTIATNNKFVVLKAVK 367 (375)
T ss_dssp -CCHHHHHHHHHHHHEEEEEEEEEEEETT---SCHHH--HHHHHHS--CCEEEEECSSEEEEEEEC
T ss_pred CHHHHHHHHHHHHHhCCCCcEEEEEEECC---cCHHH--HHHHhcC--CEEEEeeCCCEEEEEEcC
Confidence 1221 137999999999999999987521 12222 2333322 356777778888887543
No 221
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.54 E-value=9.5e-05 Score=69.57 Aligned_cols=84 Identities=11% Similarity=0.003 Sum_probs=58.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
.|.++..|..++.. +...|.++.+++.|+++ ++ ...+..+|.....+++++||+|++. .++... +
T Consensus 102 ~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~-----~~~~~~-~ 172 (248)
T 2yvl_A 102 SGALLAVLSEVAGE---VWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD-----VREPWH-Y 172 (248)
T ss_dssp TSHHHHHHHHHSSE---EEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC-----SSCGGG-G
T ss_pred ccHHHHHHHHhCCE---EEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC-----CcCHHH-H
Confidence 34444455554333 33347788899888765 43 3456667776654478899999973 233334 8
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
+.++.|+|||||++++..+
T Consensus 173 l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 173 LEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp HHHHHHHBCTTCEEEEEES
T ss_pred HHHHHHHcCCCCEEEEEeC
Confidence 9999999999999999987
No 222
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.54 E-value=7.7e-05 Score=70.55 Aligned_cols=64 Identities=13% Similarity=0.143 Sum_probs=48.4
Q ss_pred cChHHHHHHHHHcC---CCcEEeeccccC----CCCCCCcccEEEecCcccccccCh--HHHHHHHhhcccCCcEEEEe
Q 009719 164 DSHKAQIQFALERG---IPAFVAMLGTRR----LPFPAFSFDIVHCSRCLIPFTAYN--ATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 164 D~seaqvq~A~eRg---~pa~~~v~dae~----LPFpD~SFDlV~cs~~l~hw~d~~--~~aL~Ei~RVLRPGG~lviS 233 (527)
|.++.+++.|+++. ..+.+..+|+.. +|++ ++||+|++ +..+.. ..+|.++.|+|||||+++++
T Consensus 105 D~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~-----~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 105 EYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYE-----DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEE-----CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEE-----ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 77788888887653 234566778877 8888 89999992 333431 34799999999999999995
No 223
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.54 E-value=3.9e-05 Score=71.69 Aligned_cols=67 Identities=16% Similarity=0.166 Sum_probs=51.9
Q ss_pred cChHHHHHHHHHc----CC------CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEe
Q 009719 164 DSHKAQIQFALER----GI------PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 164 D~seaqvq~A~eR----g~------pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
|.++.+++.|+++ +. .+.+..+|....++++++||+|++...+.+ ++.++.|+|||||+++++
T Consensus 109 D~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~-------~~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 109 DHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPV-------VPQALIDQLKPGGRLILP 181 (226)
T ss_dssp ESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEECSBBSS-------CCHHHHHTEEEEEEEEEE
T ss_pred eCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEECCchHH-------HHHHHHHhcCCCcEEEEE
Confidence 6677888877654 21 356677888777777889999999987755 456889999999999998
Q ss_pred cCCC
Q 009719 234 GPPV 237 (527)
Q Consensus 234 ~pp~ 237 (527)
.++.
T Consensus 182 ~~~~ 185 (226)
T 1i1n_A 182 VGPA 185 (226)
T ss_dssp ESCT
T ss_pred EecC
Confidence 8743
No 224
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.53 E-value=0.00012 Score=70.87 Aligned_cols=131 Identities=15% Similarity=0.156 Sum_probs=76.2
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCC-CCchhHhhhccc-cc-----cccccC-CCCCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARK-SSTLSVIYDRGL-IG-----VYHDWC-EPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~-~ntl~vi~eRGL-iG-----~~hdwc-e~fstYPrtyDLiHa~~~fs 446 (527)
.+|||+|||+|+|+..|.+...- .|+-+|- ++.|.....+.- ++ -....+ +.++. .-||.+-++-+|+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v~~ 114 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVSFI 114 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCSSS
T ss_pred CEEEEEccCCCHHHHHHHhcCCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEEhh
Confidence 47999999999999888776531 2333332 245554443211 11 011111 22221 0135444444454
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeC-------------------C---HHHHHHHHHHHhcCCceeEEec
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-------------------S---PEVIDKVSRIANTVRWTAAVHD 504 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-------------------~---~~~~~~i~~i~~~l~W~~~~~~ 504 (527)
. +..+|-|+-|+|+|||.+++-- . ...++++.+++...-|++...+
T Consensus 115 ~------------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 115 S------------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp C------------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred h------------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 2 3669999999999999998851 1 1246678888888888876553
Q ss_pred CCC--CCC-CCceEEEEEec
Q 009719 505 KEP--GSN-GREKILVATKS 521 (527)
Q Consensus 505 ~e~--~~~-~~ekiLi~~K~ 521 (527)
..+ ++. ..|-++.++|.
T Consensus 183 ~~pi~g~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 183 FSPIKGGAGNVEFLVHLLKD 202 (232)
T ss_dssp ECSSCBTTTBCCEEEEEEES
T ss_pred EccCCCCCCCHHHHHHHhhc
Confidence 322 222 35667777773
No 225
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.53 E-value=3.3e-05 Score=73.13 Aligned_cols=129 Identities=18% Similarity=0.228 Sum_probs=67.6
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCC-C----chhHhhhc-cccccccccCCC--CCCCCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-S----TLSVIYDR-GLIGVYHDWCEP--FSTYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-n----tl~vi~eR-GLiG~~hdwce~--fstYPrtyDLiHa~~~ 444 (527)
.+|||+|||.|.++..|.+. .--|.-| |-. . .+..+-.+ ++.-+..|-.++ +..++.+||+|-++-
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~~~V~gv---D~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~- 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDEGIIYAV---EYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI- 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTTSEEEEE---CCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC-
T ss_pred CEEEEECCcCCHHHHHHHHHcCCCEEEEE---ECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec-
Confidence 37999999999998876432 1222222 222 1 11222222 222233343332 122458899998861
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeC---------CHHHH--HHHHHHHhcCCceeE-EecCCCCCCCC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD---------SPEVI--DKVSRIANTVRWTAA-VHDKEPGSNGR 512 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird---------~~~~~--~~i~~i~~~l~W~~~-~~~~e~~~~~~ 512 (527)
. +.=....+|-|+-|+|||||.+++.- +.+.+ ..++.+.+. +++. ..+.++.. ..
T Consensus 135 -~---------~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~--f~~~~~~~~~p~~-~~ 201 (210)
T 1nt2_A 135 -A---------QKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD--FKIVKHGSLMPYH-RD 201 (210)
T ss_dssp -C---------STTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT--SEEEEEEECTTTC-TT
T ss_pred -c---------ChhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh--cEEeeeecCCCCC-CC
Confidence 1 11112345789999999999999862 12222 345555555 6654 33444322 12
Q ss_pred ceEEEEEe
Q 009719 513 EKILVATK 520 (527)
Q Consensus 513 ekiLi~~K 520 (527)
--+++++|
T Consensus 202 h~~~~~~~ 209 (210)
T 1nt2_A 202 HIFIHAYR 209 (210)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEc
Confidence 33455554
No 226
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.53 E-value=3.7e-05 Score=68.93 Aligned_cols=90 Identities=14% Similarity=0.085 Sum_probs=58.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccC----CCCCCCcccEEEecCcccccccC
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRR----LPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~----LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
.|.++.+++.++.. .+...|.++.+++.|+++ ++. +.+..+|+.. +|+++++||+|++...+ +....
T Consensus 55 ~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~-~~~~~ 131 (187)
T 2fhp_A 55 SGGLAIEAVSRGMD--KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPY-AKQEI 131 (187)
T ss_dssp TCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCG-GGCCH
T ss_pred cCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCC-CchhH
Confidence 34444445555421 233336778888888754 442 5667777654 34558899999998764 33333
Q ss_pred hHHHHHHH--hhcccCCcEEEEecCC
Q 009719 213 NATYLIEV--DRLLRPGGYLVISGPP 236 (527)
Q Consensus 213 ~~~aL~Ei--~RVLRPGG~lviS~pp 236 (527)
. ..+.++ .|+|||||+++++.+.
T Consensus 132 ~-~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 132 V-SQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp H-HHHHHHHHTTCEEEEEEEEEEEET
T ss_pred H-HHHHHHHHhcccCCCCEEEEEeCC
Confidence 3 377777 9999999999998764
No 227
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.52 E-value=2.8e-05 Score=75.48 Aligned_cols=112 Identities=13% Similarity=0.096 Sum_probs=72.4
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-ccccc-ccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-IGVYH-DWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-iG~~h-dwce~fstYPrtyDLiHa~~~fs~ 447 (527)
.+|||+|||.|.++.++.+... +|+-.|-. ..+..+-++ |+ +-+++ |+.+.++ +..||+|.++.++..
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALP--FGPFDLLVANLYAEL 196 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGG--GCCEEEEEEECCHHH
T ss_pred CEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCc--CCCCCEEEECCcHHH
Confidence 5899999999999888866543 33333332 444444432 33 22221 2222221 368999998754432
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCceeEEe
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~~~~~ 503 (527)
+..++-++-|+|+|||++++.+- .+..+.+.+.++..-++....
T Consensus 197 ------------~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 197 ------------HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp ------------HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEE
T ss_pred ------------HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEE
Confidence 35688899999999999999863 334677788877777876544
No 228
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.51 E-value=4.1e-05 Score=81.43 Aligned_cols=55 Identities=13% Similarity=0.018 Sum_probs=44.6
Q ss_pred CcEEeeccccCCCCCC--CcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 179 PAFVAMLGTRRLPFPA--FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 179 pa~~~v~dae~LPFpD--~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+.+.++|...+||++ .+||+|++.-.+ ++++... .|.|+.|+|||||+|+++.+
T Consensus 233 rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~-aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 233 EYTLERGDFLSEEWRERIANTSVIFVNNFA-FGPEVDH-QLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp EEEEEECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHH-HHHHHHTTSCTTCEEEESSC
T ss_pred CeEEEECcccCCccccccCCccEEEEcccc-cCchHHH-HHHHHHHcCCCCcEEEEeec
Confidence 4678889999999976 589999987544 5554444 89999999999999999865
No 229
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.50 E-value=9.7e-05 Score=71.14 Aligned_cols=68 Identities=19% Similarity=0.182 Sum_probs=49.7
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CCCCC--CcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LPFPA--FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LPFpD--~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.+++.|+++ |+. +.+.++|+.. +|..+ ++||+|++... ..+. ..+|.++.|+|||||++++..
T Consensus 95 D~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~~---~~~~-~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 95 EADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFIDAD---KPNN-PHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp ECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEECSC---GGGH-HHHHHHHHHTCCTTCEEEEEC
T ss_pred ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECCc---hHHH-HHHHHHHHHhcCCCeEEEEeC
Confidence 6778888888765 554 5677788755 56543 49999998643 2222 349999999999999999976
Q ss_pred C
Q 009719 235 P 235 (527)
Q Consensus 235 p 235 (527)
.
T Consensus 171 ~ 171 (248)
T 3tfw_A 171 V 171 (248)
T ss_dssp C
T ss_pred C
Confidence 4
No 230
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.50 E-value=9.1e-05 Score=71.43 Aligned_cols=126 Identities=16% Similarity=0.148 Sum_probs=77.5
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc---cccc-cccCCCCCCC-CCccchhhhcC
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL---IGVY-HDWCEPFSTY-PRTYDLIHVSG 443 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL---iG~~-hdwce~fstY-PrtyDLiHa~~ 443 (527)
=.+|||+|||.|.++..|....-. +|+-+|-. ..+..+-+ .|+ +-++ .|..+....+ +.+||+|-++-
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 358999999999999988776432 44444433 33333322 243 2222 2333322224 47999999975
Q ss_pred ccccc-----cCC------CCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeE
Q 009719 444 IESLI-----KNP------GSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 444 ~fs~~-----~~~------~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~ 501 (527)
-|... ..+ ......+.+..++-++-|+|+|||.+++--..+.+.++...++...|+..
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEE
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceE
Confidence 54321 000 00011255678999999999999999997666677778888888888764
No 231
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.50 E-value=1.1e-05 Score=77.30 Aligned_cols=101 Identities=12% Similarity=0.111 Sum_probs=62.2
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----c-c-ccccccCCCCCCCC-CccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----L-I-GVYHDWCEPFSTYP-RTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----L-i-G~~hdwce~fstYP-rtyDLiHa~~~fs 446 (527)
..|||+|||.|.++.+|.+...- +|+=++.+ ..+..+-+++ + + =+..||.+-...+| .+||.|..+...+
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~~--~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~ 139 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEECCCccHHHHHHHHhCCc--EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeec
Confidence 46999999999999999776431 22222322 5555554433 1 1 12234433333345 7899997765555
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+. ..+.=+.+.++=|+-|+|||||.+++-+
T Consensus 140 ~~~----~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 140 SEE----TWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp BGG----GTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ccc----hhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 432 1111234578889999999999999853
No 232
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.49 E-value=1.5e-05 Score=78.08 Aligned_cols=95 Identities=16% Similarity=0.152 Sum_probs=60.4
Q ss_pred eEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-----c-ccccccCCCCCCCCCccchhhhcCc
Q 009719 376 NIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-----I-GVYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-----i-G~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
.|||+|||.|.++.+|.+...- |+-+|-. ..+..+-++ |+ + =+..|.. .++ ++.+||+|.+...
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~v~~~~~ 159 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGWE---VTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS-AFA-LDKRFGTVVISSG 159 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTCC---EEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT-BCC-CSCCEEEEEECHH
T ss_pred cEEEEeccCCHHHHHHHHcCCe---EEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh-cCC-cCCCcCEEEECCc
Confidence 8999999999999999887543 3333332 444444443 11 1 1222322 233 3789999886533
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.-.+. +.-....+|-|+-|+|||||.+++..
T Consensus 160 ~~~~~------~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 160 SINEL------DEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp HHTTS------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccC------CHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 22222 22234678999999999999999974
No 233
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.49 E-value=0.00025 Score=68.83 Aligned_cols=65 Identities=14% Similarity=0.178 Sum_probs=50.7
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.+++.|+++ ++ ...+..+|.... +++++||+|++. .++... +|.++.|+|||||++++..+
T Consensus 144 D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~-----~~~~~~-~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 144 EKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLD-----VPDPWN-YIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp CCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEEC-----CSCGGG-THHHHHHHEEEEEEEEEEES
T ss_pred ECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEEC-----CcCHHH-HHHHHHHHcCCCCEEEEEeC
Confidence 7778888888765 54 345667777666 788899999973 334334 99999999999999999887
No 234
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.48 E-value=3.2e-05 Score=69.41 Aligned_cols=90 Identities=9% Similarity=0.038 Sum_probs=60.2
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccC-CCCCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
.|.++..+..++.. .+...|.++.+++.|+++ ++. +.+..+|+.. ++..+++||+|++...+ +..... .
T Consensus 42 ~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~-~~~~~~-~ 117 (177)
T 2esr_A 42 SGGLAIEAVSRGMS--AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY-AKETIV-A 117 (177)
T ss_dssp TCHHHHHHHHTTCC--EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS-HHHHHH-H
T ss_pred CCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC-CcchHH-H
Confidence 45555556665431 333447788999988764 333 5566777666 56666789999998654 222222 3
Q ss_pred HHHHHh--hcccCCcEEEEecCC
Q 009719 216 YLIEVD--RLLRPGGYLVISGPP 236 (527)
Q Consensus 216 aL~Ei~--RVLRPGG~lviS~pp 236 (527)
.+.++. |+|||||+++++.+.
T Consensus 118 ~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 118 TIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp HHHHHHHTTCEEEEEEEEEEEET
T ss_pred HHHHHHhCCCcCCCcEEEEEECC
Confidence 677776 999999999998764
No 235
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.48 E-value=0.00015 Score=66.53 Aligned_cols=67 Identities=13% Similarity=0.055 Sum_probs=50.4
Q ss_pred CcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 163 RDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.|.++.+++.|+++ +++ +.+..++...++ ++++||+|+|.. +.+ ...++.++.|+|||||++++...
T Consensus 95 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~-~~~----~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 95 LDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA-FAS----LNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp EESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC-SSS----HHHHHHHHTTSEEEEEEEEEEES
T ss_pred EeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec-cCC----HHHHHHHHHHhcCCCcEEEEEeC
Confidence 36677888888754 554 566778887776 578999999753 322 23499999999999999999754
No 236
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.48 E-value=9.2e-05 Score=71.24 Aligned_cols=132 Identities=13% Similarity=0.089 Sum_probs=72.0
Q ss_pred eeEeecCCCccchhhhccCC------C--eeEEEecCCCCCCchhHhhhccccccccccCCC--CCCCCC-ccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD------P--VWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEP--FSTYPR-TYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~------~--VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~--fstYPr-tyDLiHa~~ 443 (527)
.+|||+|||.|++++.|.+. . |..+-+-|.-. .... -+...+-=+..|..+. ++..+. +||+|+++.
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l-~~a~-~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRC-QIPA-SDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTC-CCCG-GGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHH-HHHh-ccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 48999999999999988543 2 44444333321 1111 0011111122343332 222222 699998753
Q ss_pred ccccccCCCCCCCCCcccccceeecc-cccCCcEEEEeCCHH-----HHHHHHHHHhcC--CceeEEecCCCCCCCCceE
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDR-MLRPEGTVVVRDSPE-----VIDKVSRIANTV--RWTAAVHDKEPGSNGREKI 515 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDR-ILRP~G~~iird~~~-----~~~~i~~i~~~l--~W~~~~~~~e~~~~~~eki 515 (527)
. + -....+|-|+-| +|+|||++++.|... .-..+.++++.. .++....-...-...++.+
T Consensus 161 ~-----------~-~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~g~ 228 (236)
T 2bm8_A 161 A-----------H-ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMDMLYANASSQLDRGV 228 (236)
T ss_dssp S-----------C-SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEETTTTTSCTTTTTCE
T ss_pred c-----------h-HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEcchhhcccccccchH
Confidence 2 1 145678999998 999999999987311 123567777776 5665432111112334555
Q ss_pred EEEEe
Q 009719 516 LVATK 520 (527)
Q Consensus 516 Li~~K 520 (527)
+...|
T Consensus 229 ~~~~~ 233 (236)
T 2bm8_A 229 LRRVA 233 (236)
T ss_dssp EEECC
T ss_pred hhhcc
Confidence 55544
No 237
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.47 E-value=9.6e-05 Score=74.57 Aligned_cols=53 Identities=15% Similarity=0.113 Sum_probs=44.1
Q ss_pred cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 180 AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+..+|.. .|+| +||+|+++.++|||.+.. ..+|+++.|+|||||+|++...
T Consensus 234 v~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 234 WKVVEGDFL-REVP--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp EEEEECCTT-TCCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred eEEEecCCC-CCCC--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 456677774 4555 899999999999998774 3599999999999999999764
No 238
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.47 E-value=3e-05 Score=73.35 Aligned_cols=96 Identities=19% Similarity=0.253 Sum_probs=59.6
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-cc-cccccCCCCCCCCCccchhhhcCccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-IG-VYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-iG-~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
-.+|||+|||.|.++..|.+... +|+-+|.. ..+..+-++ |+ +- +..|..+ ++ .+.+||+|.+.....
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~~~ 116 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IA-FKNEFDAVTMFFSTI 116 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CC-CCSCEEEEEECSSGG
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-cc-cCCCccEEEEcCCch
Confidence 46899999999999999977754 34444433 444444332 32 11 1223222 22 457899998753222
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.+. +.=....+|-++-|+|+|||.+|+.
T Consensus 117 ~~~------~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 117 MYF------DEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GGS------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcC------CHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 221 1113467889999999999999985
No 239
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.47 E-value=2.8e-05 Score=67.93 Aligned_cols=56 Identities=14% Similarity=-0.033 Sum_probs=44.5
Q ss_pred cEEeeccccCCC--------CCCCcccEEEecCcccccccCh----------HHHHHHHhhcccCCcEEEEecC
Q 009719 180 AFVAMLGTRRLP--------FPAFSFDIVHCSRCLIPFTAYN----------ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~LP--------FpD~SFDlV~cs~~l~hw~d~~----------~~aL~Ei~RVLRPGG~lviS~p 235 (527)
..+.++|...++ +++++||+|++...+++..... ..++.++.|+|||||+++++.+
T Consensus 64 ~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 64 VDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp EEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEcccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 556677888877 8899999999987764433320 3489999999999999999876
No 240
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.46 E-value=4e-05 Score=72.18 Aligned_cols=88 Identities=9% Similarity=0.057 Sum_probs=60.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc--ccccccccCCCCCCC-CCccchhhhcCccccccC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG--LIGVYHDWCEPFSTY-PRTYDLIHVSGIESLIKN 450 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG--LiG~~hdwce~fstY-PrtyDLiHa~~~fs~~~~ 450 (527)
..|||+|||.|.++..|.+... .|+-+|.. ..+..+-++. +-=+..|+.+.++.- +.+||+|.+. .
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~--~----- 119 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR--R----- 119 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE--S-----
T ss_pred CeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC--C-----
Confidence 5799999999999999987754 34444433 5566665552 222234554554422 4799999875 1
Q ss_pred CCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 451 PGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 451 ~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+...+|-|+-|+|||||.++.-
T Consensus 120 --------~~~~~l~~~~~~LkpgG~l~~~ 141 (226)
T 3m33_A 120 --------GPTSVILRLPELAAPDAHFLYV 141 (226)
T ss_dssp --------CCSGGGGGHHHHEEEEEEEEEE
T ss_pred --------CHHHHHHHHHHHcCCCcEEEEe
Confidence 2357899999999999999943
No 241
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.46 E-value=4e-05 Score=71.58 Aligned_cols=118 Identities=9% Similarity=0.088 Sum_probs=71.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc-cc--------------cccccccCCCCCCCC----C
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR-GL--------------IGVYHDWCEPFSTYP----R 434 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR-GL--------------iG~~hdwce~fstYP----r 434 (527)
..|||+|||.|.++..|.++.. .|+-+|-. .-|..+-+| ++ ..-..=.|.-+...| .
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 100 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG 100 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred CEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCC
Confidence 4799999999999999977653 34444433 445555554 11 000111122222333 6
Q ss_pred ccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcE-EEE-eCCH----------HHHHHHHHHHhcCCceeEE
Q 009719 435 TYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGT-VVV-RDSP----------EVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 435 tyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~-~ii-rd~~----------~~~~~i~~i~~~l~W~~~~ 502 (527)
+||+|-+..+|.... .-....++-||-|+|||||. +++ -+-. -..+++++++.. .|++..
T Consensus 101 ~fD~v~~~~~l~~l~-------~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~ 172 (203)
T 1pjz_A 101 HCAAFYDRAAMIALP-------ADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTK 172 (203)
T ss_dssp SEEEEEEESCGGGSC-------HHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEE
T ss_pred CEEEEEECcchhhCC-------HHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEE
Confidence 899999877776542 12234578899999999998 333 2210 124677787777 787654
Q ss_pred e
Q 009719 503 H 503 (527)
Q Consensus 503 ~ 503 (527)
.
T Consensus 173 ~ 173 (203)
T 1pjz_A 173 V 173 (203)
T ss_dssp E
T ss_pred e
Confidence 4
No 242
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.46 E-value=9e-05 Score=70.94 Aligned_cols=71 Identities=18% Similarity=0.182 Sum_probs=50.0
Q ss_pred cChHHHHHHHHHc------------CCC-cEEeeccccC-CC--CCCCcccEEEecCcccccccCh--------HHHHHH
Q 009719 164 DSHKAQIQFALER------------GIP-AFVAMLGTRR-LP--FPAFSFDIVHCSRCLIPFTAYN--------ATYLIE 219 (527)
Q Consensus 164 D~seaqvq~A~eR------------g~p-a~~~v~dae~-LP--FpD~SFDlV~cs~~l~hw~d~~--------~~aL~E 219 (527)
|.++.+++.|+++ +++ +.+..+|+.. || |++++||.|+.... -.|.... ..++.+
T Consensus 80 D~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~ 158 (246)
T 2vdv_E 80 EIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLSKMFFCFP-DPHFKQRKHKARIITNTLLSE 158 (246)
T ss_dssp ESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEEEEEEESC-CCC------CSSCCCHHHHHH
T ss_pred EcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccCEEEEECC-CcccccchhHHhhccHHHHHH
Confidence 6677888877653 543 5677788776 78 88999999985432 1221110 249999
Q ss_pred HhhcccCCcEEEEecC
Q 009719 220 VDRLLRPGGYLVISGP 235 (527)
Q Consensus 220 i~RVLRPGG~lviS~p 235 (527)
+.|+|||||+|++.+.
T Consensus 159 ~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 159 YAYVLKEGGVVYTITD 174 (246)
T ss_dssp HHHHEEEEEEEEEEES
T ss_pred HHHHcCCCCEEEEEec
Confidence 9999999999999764
No 243
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.45 E-value=7.3e-05 Score=69.14 Aligned_cols=65 Identities=15% Similarity=0.130 Sum_probs=49.7
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCC-CCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFP-AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFp-D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.+++.|+++ +.+ ..+..+|.. .+++ +++||+|++..+++|+. .++.|+|||||+++++.++
T Consensus 109 D~~~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 109 ERIPELAEKAERTLRKLGYDNVIVIVGDGT-LGYEPLAPYDRIYTTAAGPKIP-------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp ESCHHHHHHHHHHHHHHTCTTEEEEESCGG-GCCGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEESS
T ss_pred eCCHHHHHHHHHHHHHcCCCCeEEEECCcc-cCCCCCCCeeEEEECCchHHHH-------HHHHHHcCCCcEEEEEECC
Confidence 6678888888765 443 456666763 3444 78999999999987765 4889999999999998874
No 244
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.45 E-value=3.1e-05 Score=76.49 Aligned_cols=112 Identities=10% Similarity=0.051 Sum_probs=65.4
Q ss_pred HHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc-----------c--cc-cccc
Q 009719 360 YYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG-----------L--IG-VYHD 424 (527)
Q Consensus 360 ~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG-----------L--iG-~~hd 424 (527)
.+.+.+...+. .-.+|||+|||.|.++..|...+.. +|+-.|-. ..+..+-+|- . +- +..|
T Consensus 23 ~~~~~l~~~~~--~~~~VLDlGcG~G~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D 98 (313)
T 3bgv_A 23 EFLEKVRQKKK--RDITVLDLGCGKGGDLLKWKKGRIN--KLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITAD 98 (313)
T ss_dssp HHHHHHHHTC----CCEEEEETCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECC
T ss_pred HHHHHhhhccC--CCCEEEEECCCCcHHHHHHHhcCCC--EEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEec
Confidence 35554442222 3458999999999999988765432 33333433 4444444331 1 11 1222
Q ss_pred cCCCCC---CC---CCccchhhhcCccccc-cCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 425 WCEPFS---TY---PRTYDLIHVSGIESLI-KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 425 wce~fs---tY---PrtyDLiHa~~~fs~~-~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
. +.++ .+ +.+||+|-+..++... . +.-....+|-|+-|+|+|||.+++...
T Consensus 99 ~-~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~------~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 99 S-SKELLIDKFRDPQMCFDICSCQFVCHYSFE------SYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp T-TTSCSTTTCSSTTCCEEEEEEETCGGGGGG------SHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred c-cccchhhhcccCCCCEEEEEEecchhhccC------CHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 2 2222 13 3589999998766422 1 111235789999999999999999853
No 245
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.44 E-value=1.2e-05 Score=73.17 Aligned_cols=89 Identities=10% Similarity=-0.023 Sum_probs=45.6
Q ss_pred hhccccccccC--CeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCC-----CcccEEEecCcccccc-
Q 009719 143 VASFGGSMLSE--NILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPA-----FSFDIVHCSRCLIPFT- 210 (527)
Q Consensus 143 vgsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD-----~SFDlV~cs~~l~hw~- 210 (527)
.|.++..|..+ +.. +...|.++.+++.|+++ +..+.+.++|+.. ++++ ++||+|+|.-..++..
T Consensus 41 ~G~~~~~l~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~ 116 (215)
T 4dzr_A 41 SGCIAVSIALACPGVS---VTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGE 116 (215)
T ss_dssp BCHHHHHHHHHCTTEE---EEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC---
T ss_pred HhHHHHHHHHhCCCCe---EEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCcc
Confidence 34444445554 322 33336677778777655 2234566677766 7777 9999999964332211
Q ss_pred -----cCh-------------------HHHHHHHhhcccCCcE-EEEecC
Q 009719 211 -----AYN-------------------ATYLIEVDRLLRPGGY-LVISGP 235 (527)
Q Consensus 211 -----d~~-------------------~~aL~Ei~RVLRPGG~-lviS~p 235 (527)
... ..++.++.|+|||||+ +++..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 117 IDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp ---------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred ccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 110 3488999999999999 666554
No 246
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=97.44 E-value=4.4e-05 Score=76.19 Aligned_cols=136 Identities=18% Similarity=0.201 Sum_probs=84.8
Q ss_pred ccCCCCeeeEeecCCCccchhhhccC--CCeeEEEecCCCCCCchhHhh----hccccc----cccccCCCCCCCCCccc
Q 009719 368 KLGTPAIRNIMDMNAFFGGFAAALTS--DPVWVMNVVPARKSSTLSVIY----DRGLIG----VYHDWCEPFSTYPRTYD 437 (527)
Q Consensus 368 ~i~~~~iRnvmDm~ag~GgFaAaL~~--~~VwvMnvvp~~~~ntl~vi~----eRGLiG----~~hdwce~fstYPrtyD 437 (527)
.+......+|+|+|||.|.++.+|.+ ..+-+..+ |-+..+..+- +.|+-+ +-+|..++ +|..||
T Consensus 164 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~p~~~D 237 (332)
T 3i53_A 164 KYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVL---DLQGPASAAHRRFLDTGLSGRAQVVVGSFFDP---LPAGAG 237 (332)
T ss_dssp SSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CCCSCS
T ss_pred hCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEe---cCHHHHHHHHHhhhhcCcCcCeEEecCCCCCC---CCCCCc
Confidence 34556678999999999999988854 22222222 2233333332 234421 22343333 455899
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH----------------------HHHHHHHHHHhc
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP----------------------EVIDKVSRIANT 495 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~----------------------~~~~~i~~i~~~ 495 (527)
+|.+..++..|. + =....+|-++=|.|+|||+++|.|.. ...++++++++.
T Consensus 238 ~v~~~~vlh~~~------~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~ 310 (332)
T 3i53_A 238 GYVLSAVLHDWD------D-LSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQ 310 (332)
T ss_dssp EEEEESCGGGSC------H-HHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHH
T ss_pred EEEEehhhccCC------H-HHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHH
Confidence 999999998774 1 12357899999999999999997531 013456677777
Q ss_pred CCceeEEecCCCCCCCCceEEEEEe
Q 009719 496 VRWTAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 496 l~W~~~~~~~e~~~~~~ekiLi~~K 520 (527)
--++........ + ..|+.++|
T Consensus 311 aGf~~~~~~~~~-~---~~vie~r~ 331 (332)
T 3i53_A 311 AGLAVRAAHPIS-Y---VSIVEMTA 331 (332)
T ss_dssp TTEEEEEEEECS-S---SEEEEEEE
T ss_pred CCCEEEEEEECC-C---cEEEEEee
Confidence 777754332221 1 56777776
No 247
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.44 E-value=2.8e-05 Score=79.15 Aligned_cols=99 Identities=14% Similarity=0.191 Sum_probs=61.0
Q ss_pred eeEeecCCCccchhhhccCCCe-eEEEecCCCCC-CchhHhhhccc---cccccccCCCCCCCC-CccchhhhcCccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKS-STLSVIYDRGL---IGVYHDWCEPFSTYP-RTYDLIHVSGIESLI 448 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~-ntl~vi~eRGL---iG~~hdwce~fstYP-rtyDLiHa~~~fs~~ 448 (527)
.+|||+|||.|.++.+|.+.+. -|.-|=+...- .....+-+.|+ |-+.+.=-+.+ .+| .+||+|.+..+....
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~Iis~~~~~~l 146 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV-ELPVEKVDIIISEWMGYCL 146 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSSCEEEEEECCCBBTB
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHc-cCCCCceEEEEEccccccc
Confidence 5799999999999998877653 33333333111 11122333455 22332222233 255 899999987654433
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
. ..-.+..++-+++|+|+|||.+|..
T Consensus 147 ~------~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 147 F------YESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp T------BTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred c------CchhHHHHHHHHHHhCCCCCEEccc
Confidence 2 2234567888999999999999755
No 248
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.44 E-value=1.3e-05 Score=75.80 Aligned_cols=100 Identities=12% Similarity=0.086 Sum_probs=59.0
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----c-cc-cccccCCCCCCCC-Cccchhhhc-Ccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----L-IG-VYHDWCEPFSTYP-RTYDLIHVS-GIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----L-iG-~~hdwce~fstYP-rtyDLiHa~-~~f 445 (527)
..|||+|||.|.++..|.....- +|+-+|.. +.+..+-++. . +- +..|+.+....+| .+||+|.++ ..+
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEEeccCCHHHHHHHhcCCC--eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc
Confidence 57999999999999999775542 34444443 5555554432 1 11 1112222111234 799999883 221
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
... ..+.=..+.++-|+-|+|||||.+++-+
T Consensus 140 -~~~----~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 140 -SEE----TWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp -BGG----GTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred -chh----hhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 111 0011112356899999999999999875
No 249
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.43 E-value=3.9e-05 Score=77.39 Aligned_cols=136 Identities=14% Similarity=0.133 Sum_probs=81.1
Q ss_pred ccCCCCeeeEeecCCCccchhhhccC--CCeeEEEecCCCCCCchh--Hhhhcccc----ccccccCCCCCCCCCccchh
Q 009719 368 KLGTPAIRNIMDMNAFFGGFAAALTS--DPVWVMNVVPARKSSTLS--VIYDRGLI----GVYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 368 ~i~~~~iRnvmDm~ag~GgFaAaL~~--~~VwvMnvvp~~~~ntl~--vi~eRGLi----G~~hdwce~fstYPrtyDLi 439 (527)
.+......+|+|+|||.|.++.+|.+ ..+-+..+ |-+..+. .+-+.|+- =+-+|..+ ..| +||+|
T Consensus 179 ~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~~~~~~~~~~~~v~~~~~d~~~---~~p-~~D~v 251 (348)
T 3lst_A 179 AGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLL---DRAEVVARHRLDAPDVAGRWKVVEGDFLR---EVP-HADVH 251 (348)
T ss_dssp HSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEE---ECHHHHTTCCCCCGGGTTSEEEEECCTTT---CCC-CCSEE
T ss_pred hCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEe---cCHHHhhcccccccCCCCCeEEEecCCCC---CCC-CCcEE
Confidence 34556789999999999999998854 23322221 1111000 01112331 12234333 356 99999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC---------H----------------HHHHHHHHHHh
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS---------P----------------EVIDKVSRIAN 494 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~---------~----------------~~~~~i~~i~~ 494 (527)
.+..++-.|. + =....+|-|+-|+|||||.++|.|. . ...++++++++
T Consensus 252 ~~~~vlh~~~------d-~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~ 324 (348)
T 3lst_A 252 VLKRILHNWG------D-EDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFT 324 (348)
T ss_dssp EEESCGGGSC------H-HHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHH
T ss_pred EEehhccCCC------H-HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHH
Confidence 9999998774 1 1124789999999999999999752 0 02345667777
Q ss_pred cCCceeEEecCCCCCCCCceEEEEEe
Q 009719 495 TVRWTAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 495 ~l~W~~~~~~~e~~~~~~ekiLi~~K 520 (527)
.--++....... + ....|+.++|
T Consensus 325 ~aGf~~~~~~~~-~--~~~~vie~~p 347 (348)
T 3lst_A 325 AAGLRLDRVVGT-S--SVMSIAVGVP 347 (348)
T ss_dssp HTTEEEEEEEEC-S--SSCEEEEEEE
T ss_pred HCCCceEEEEEC-C--CCcEEEEEEe
Confidence 777776543221 1 2345666654
No 250
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.42 E-value=6.3e-05 Score=66.72 Aligned_cols=110 Identities=9% Similarity=0.126 Sum_probs=72.4
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhhc----cc--c-ccccccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYDR----GL--I-GVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~eR----GL--i-G~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
.+|||+|||.|.++.+|.....-|..+=+. +..+..+-++ |+ + -+..|+.++++. .+||+|.++..
T Consensus 37 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~--~~~D~i~~~~~--- 109 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAKRCKFVYAIDYL--DGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK--LEFNKAFIGGT--- 109 (183)
T ss_dssp CEEEEESCCCSHHHHHHHTTSSEEEEEECS--HHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG--CCCSEEEECSC---
T ss_pred CEEEEeCCCCCHHHHHHHhcCCeEEEEeCC--HHHHHHHHHHHHHcCCCcEEEEECCccccccC--CCCcEEEECCc---
Confidence 489999999999999998743333222211 1333333333 33 1 122344333321 58999998755
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCceeEEe
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~~~~~ 503 (527)
..+..++-++-|+ |||.+++.+ ..+.+.++.+.++...|++...
T Consensus 110 ----------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 110 ----------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp ----------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ----------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 2346788888888 999999987 6667788888888888887765
No 251
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=97.42 E-value=4.1e-05 Score=77.23 Aligned_cols=139 Identities=21% Similarity=0.208 Sum_probs=82.9
Q ss_pred CCCCeeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHhhh----cccc----ccccccCCCCCCCCCccchh
Q 009719 370 GTPAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVIYD----RGLI----GVYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 370 ~~~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi~e----RGLi----G~~hdwce~fstYPrtyDLi 439 (527)
....-.+|+|+|||.|.++.+|.+. .+-+..+ |-+..+..+-+ .|+- =+.+|..++ .|..||+|
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~v 252 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLV---ELAGPAERARRRFADAGLADRVTVAEGDFFKP---LPVTADVV 252 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CSCCEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEE---eCHHHHHHHHHHHHhcCCCCceEEEeCCCCCc---CCCCCCEE
Confidence 3445679999999999999988643 2322222 11233333322 3432 123344433 45569999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC--H--H-----------------------HHHHHHHH
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--P--E-----------------------VIDKVSRI 492 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--~--~-----------------------~~~~i~~i 492 (527)
.+..++..|. + =....+|-++-|+|+|||+++|.+. . + ..++++++
T Consensus 253 ~~~~vl~~~~------~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 325 (374)
T 1qzz_A 253 LLSFVLLNWS------D-EDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDL 325 (374)
T ss_dssp EEESCGGGSC------H-HHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHH
T ss_pred EEeccccCCC------H-HHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHH
Confidence 9999987764 1 1123689999999999999998654 1 1 23456667
Q ss_pred HhcCCceeEEecCCCCCC--CCceEEEEEec
Q 009719 493 ANTVRWTAAVHDKEPGSN--GREKILVATKS 521 (527)
Q Consensus 493 ~~~l~W~~~~~~~e~~~~--~~ekiLi~~K~ 521 (527)
++.--++......-.+.. ....++.++|.
T Consensus 326 l~~aGf~~~~~~~~~~~~~~~~~~~i~~~~~ 356 (374)
T 1qzz_A 326 AGSAGLALASERTSGSTTLPFDFSILEFTAV 356 (374)
T ss_dssp HHTTTEEEEEEEEECCSSCSSCEEEEEEEEC
T ss_pred HHHCCCceEEEEECCCCcccCCcEEEEEEEC
Confidence 777777754332111111 11268888875
No 252
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.42 E-value=2.7e-05 Score=72.67 Aligned_cols=132 Identities=17% Similarity=0.180 Sum_probs=72.8
Q ss_pred eeeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhh----ccccc---cc-cccCCCCCCCC----Cccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYD----RGLIG---VY-HDWCEPFSTYP----RTYD 437 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~e----RGLiG---~~-hdwce~fstYP----rtyD 437 (527)
-.+|||+|||.|+++.+|... ..- |+-.+.. ..+..+-+ .|+-. +. .|..+.++..+ .+||
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGR---VVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 368999999999999988665 322 2222222 33333322 24421 11 12222111111 4699
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH------------HHHHHHHH----HHhcCCceeE
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------------EVIDKVSR----IANTVRWTAA 501 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~------------~~~~~i~~----i~~~l~W~~~ 501 (527)
+|.++..... ...++-++-|+|||||.+++.+.. .....+++ +...-+++..
T Consensus 136 ~v~~d~~~~~------------~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 203 (223)
T 3duw_A 136 FIFIDADKQN------------NPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSAT 203 (223)
T ss_dssp EEEECSCGGG------------HHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEE
T ss_pred EEEEcCCcHH------------HHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEE
Confidence 9987644332 246778889999999999997521 11223333 3344466665
Q ss_pred EecCCCCCCCCceEEEEEec
Q 009719 502 VHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 502 ~~~~e~~~~~~ekiLi~~K~ 521 (527)
....- +..+.+.+++++|+
T Consensus 204 ~~p~~-~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 204 ALQTV-GSKGYDGFIMAVVK 222 (223)
T ss_dssp EEEEE-ETTEEEEEEEEEEC
T ss_pred EEecc-CCCCCCeeEEEEEe
Confidence 54321 22335678888864
No 253
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.41 E-value=0.00026 Score=68.85 Aligned_cols=66 Identities=15% Similarity=0.135 Sum_probs=51.0
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCCC---CCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPFP---AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPFp---D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.++++|+++ ++. +.+..++++.+++. +++||+|+|..+ .++ ..++.++.|+|||||+|++..
T Consensus 111 D~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~-~~~----~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 111 DATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAV-APL----CVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp ESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESS-CCH----HHHHHHHGGGEEEEEEEEEEE
T ss_pred ECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECCc-CCH----HHHHHHHHHHcCCCeEEEEEe
Confidence 7788888888754 554 66778888888764 589999998643 232 349999999999999998754
No 254
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.40 E-value=4.7e-05 Score=74.15 Aligned_cols=140 Identities=14% Similarity=0.222 Sum_probs=80.9
Q ss_pred eeEeecCCCccchhhhccC-CCeeEEEecCCCCC-CchhHhhhc----cc--cc-cccccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTS-DPVWVMNVVPARKS-STLSVIYDR----GL--IG-VYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~-~~VwvMnvvp~~~~-ntl~vi~eR----GL--iG-~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|+|+|||.|.++.+|.. .|-. +|+-+|.. ..+.++-++ |+ +- +..|+.+.++ +.+||+|-++--+
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~--~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npPy 186 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDC--EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPPY 186 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTS--EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCCC
T ss_pred CEEEEecCCccHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCCC
Confidence 4799999999999988863 2221 23333433 444444333 33 21 2335555443 4789999987544
Q ss_pred ccccC----CCC---CCCC---------CcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEEecCCCCC
Q 009719 446 SLIKN----PGS---NKNS---------CSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVHDKEPGS 509 (527)
Q Consensus 446 s~~~~----~~~---~~~r---------C~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~~~~e~~~ 509 (527)
..... +.. +... -.+..++-++-|+|+|||++++.......++++++++...|+...... .-
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~--d~ 264 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCR--DY 264 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEE--CT
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEe--cC
Confidence 32110 000 0000 112457778999999999999986555556677777666665321111 22
Q ss_pred CCCceEEEEEe
Q 009719 510 NGREKILVATK 520 (527)
Q Consensus 510 ~~~ekiLi~~K 520 (527)
.+.+++++++|
T Consensus 265 ~g~~r~~~~~~ 275 (276)
T 2b3t_A 265 GDNERVTLGRY 275 (276)
T ss_dssp TSSEEEEEEEC
T ss_pred CCCCcEEEEEE
Confidence 35678988875
No 255
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=97.40 E-value=8.3e-05 Score=73.94 Aligned_cols=133 Identities=17% Similarity=0.168 Sum_probs=83.0
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhh----ccc----cccccccCCCCCCCCCcc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYD----RGL----IGVYHDWCEPFSTYPRTY 436 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~e----RGL----iG~~hdwce~fstYPrty 436 (527)
+.... .+|+|+|||.|.++.+|.+. .+..+-+ | ..+..+-+ .|+ --+-+|..+ .+|..|
T Consensus 164 ~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~ 234 (334)
T 2ip2_A 164 LDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-E----GSLGVARDNLSSLLAGERVSLVGGDMLQ---EVPSNG 234 (334)
T ss_dssp SCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-T----TCTHHHHHHTHHHHHTTSEEEEESCTTT---CCCSSC
T ss_pred CCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-H----HHHHHHHHHHhhcCCCCcEEEecCCCCC---CCCCCC
Confidence 34445 89999999999999988643 2444443 3 33333322 233 223344444 357889
Q ss_pred chhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH-------------H------------HHHHHHH
Q 009719 437 DLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-------------E------------VIDKVSR 491 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~-------------~------------~~~~i~~ 491 (527)
|+|.+..++..|.+ . ....+|-++-|.|+|||+++|.|.. + ..+++++
T Consensus 235 D~v~~~~vl~~~~~-----~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ 307 (334)
T 2ip2_A 235 DIYLLSRIIGDLDE-----A--ASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVD 307 (334)
T ss_dssp SEEEEESCGGGCCH-----H--HHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHH
T ss_pred CEEEEchhccCCCH-----H--HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHH
Confidence 99999999887741 1 2247899999999999999997410 0 1344566
Q ss_pred HHhcCCceeEEecCCCCCCCCceEEEEEe
Q 009719 492 IANTVRWTAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 492 i~~~l~W~~~~~~~e~~~~~~ekiLi~~K 520 (527)
+++.--++....... + ....|+.++|
T Consensus 308 ll~~aGf~~~~~~~~-~--~~~~~i~~~~ 333 (334)
T 2ip2_A 308 LLGRGGFAVERIVDL-P--METRMIVAAR 333 (334)
T ss_dssp HHHHTTEEEEEEEEE-T--TTEEEEEEEE
T ss_pred HHHHCCCceeEEEEC-C--CCCEEEEEEe
Confidence 666666765432211 1 2356888877
No 256
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.40 E-value=0.00018 Score=69.97 Aligned_cols=73 Identities=12% Similarity=0.111 Sum_probs=51.7
Q ss_pred cCcChHHHHHHHHHc----CCC-cEEeeccccCCCCCCCcccEEEecC-------------cccccc-----------cC
Q 009719 162 PRDSHKAQIQFALER----GIP-AFVAMLGTRRLPFPAFSFDIVHCSR-------------CLIPFT-----------AY 212 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~p-a~~~v~dae~LPFpD~SFDlV~cs~-------------~l~hw~-----------d~ 212 (527)
..|.++.+++.|+++ +++ +.+..+|... ++++++||+|+|.- ++.|.+ +.
T Consensus 138 ~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~ 216 (276)
T 2b3t_A 138 AVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMAD 216 (276)
T ss_dssp EECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHH
T ss_pred EEECCHHHHHHHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHH
Confidence 337788888888765 544 5667777654 45578999999973 332322 11
Q ss_pred hHHHHHHHhhcccCCcEEEEecC
Q 009719 213 NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 213 ~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
...++.++.|+|||||++++..+
T Consensus 217 ~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 217 IVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp HHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCCEEEEEEC
Confidence 23488999999999999999865
No 257
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.39 E-value=0.0001 Score=67.32 Aligned_cols=132 Identities=11% Similarity=0.138 Sum_probs=68.4
Q ss_pred eeEeecCCCccchhhhccCC------CeeEEEecCCCCCCchhHhhhccccccccccCCCCC------------------
Q 009719 375 RNIMDMNAFFGGFAAALTSD------PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFS------------------ 430 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~------~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~fs------------------ 430 (527)
.+|||+|||.|+++.+|.+. .|.-+-+.|..... ++.=+..|..+. .
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~--------~v~~~~~d~~~~-~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIP--------NVYFIQGEIGKD-NMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCT--------TCEEEECCTTTT-SSCCC-----------CHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCC--------CceEEEccccch-hhhhhccccccccccchhh
Confidence 57999999999999888543 24444444421111 111111222211 1
Q ss_pred ------CCC-CccchhhhcCccccccCCCCCCCCCc-------ccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhc
Q 009719 431 ------TYP-RTYDLIHVSGIESLIKNPGSNKNSCS-------LVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANT 495 (527)
Q Consensus 431 ------tYP-rtyDLiHa~~~fs~~~~~~~~~~rC~-------~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~ 495 (527)
.++ .+||+|-++..+.... .+.-+ ...+|-|+-|+|+|||.+++..- .+....+...++.
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g-----~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~ 169 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIG-----NKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKG 169 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCS-----CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHT
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCC-----CcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHH
Confidence 023 6899999875543110 00000 12367789999999999998631 1222334444444
Q ss_pred CCceeEEe-cCCCCCCCCceEEEEEe
Q 009719 496 VRWTAAVH-DKEPGSNGREKILVATK 520 (527)
Q Consensus 496 l~W~~~~~-~~e~~~~~~ekiLi~~K 520 (527)
.-.++... +....+...|..+||++
T Consensus 170 ~f~~v~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 170 MFQLVHTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp TEEEEEECCCC-----CCEEEEEEEE
T ss_pred HHheEEEECCcccCCcCceEEEEEec
Confidence 32223332 22233445788999876
No 258
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.39 E-value=4.9e-05 Score=76.84 Aligned_cols=67 Identities=13% Similarity=0.035 Sum_probs=51.0
Q ss_pred cChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccC---CcEEEEecC
Q 009719 164 DSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRP---GGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRP---GG~lviS~p 235 (527)
|. ..+++.|++. ..+.+..+|... |+| +||+|+++.++|||.+.. ..+|+++.|+||| ||++++...
T Consensus 224 D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 224 DQ-PQVVGNLTGN-ENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp EC-HHHHSSCCCC-SSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred cc-HHHHhhcccC-CCcEEEeCccCC-CCC--CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 55 4666655442 125566777766 777 399999999999998765 1499999999999 999999764
No 259
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.38 E-value=3.5e-05 Score=72.31 Aligned_cols=133 Identities=10% Similarity=0.088 Sum_probs=74.9
Q ss_pred eeeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhhh----ccccc----cccccCCCCCCCC-----Cccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIYD----RGLIG----VYHDWCEPFSTYP-----RTYD 437 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~e----RGLiG----~~hdwce~fstYP-----rtyD 437 (527)
-++|||+|||.|.++..|... ..-|..|-.. +..+.++-+ .|+-. +..|..+.++..+ .+||
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEIN--PDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC--HHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCC--hHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 468999999999999888652 3322222211 133333322 24421 1223333334444 6899
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-----HHHHHHHHHHHhcCCceeEEec-CCCCCCC
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-----PEVIDKVSRIANTVRWTAAVHD-KEPGSNG 511 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-----~~~~~~i~~i~~~l~W~~~~~~-~e~~~~~ 511 (527)
+|.++.....+. ....++-++ |+|||||.+++.|- .++++.+++ .=.++..... .......
T Consensus 137 ~V~~d~~~~~~~---------~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~ 203 (221)
T 3u81_A 137 MVFLDHWKDRYL---------PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRG---SSSFECTHYSSYLEYMKV 203 (221)
T ss_dssp EEEECSCGGGHH---------HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHH---CTTEEEEEEEEEETTTTE
T ss_pred EEEEcCCcccch---------HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhh---CCCceEEEcccccccCCC
Confidence 998876555442 112456667 99999999999863 334444433 3356655442 1122334
Q ss_pred CceEEEEEec
Q 009719 512 REKILVATKS 521 (527)
Q Consensus 512 ~ekiLi~~K~ 521 (527)
.+.+.+++++
T Consensus 204 ~dG~~~~~~~ 213 (221)
T 3u81_A 204 VDGLEKAIYQ 213 (221)
T ss_dssp EEEEEEEEEC
T ss_pred CCceEEEEEe
Confidence 5678888764
No 260
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.38 E-value=2.3e-05 Score=71.69 Aligned_cols=96 Identities=13% Similarity=0.124 Sum_probs=58.4
Q ss_pred eeEeecCCCccchh-hhccCCCeeEEEecCCCCC-CchhHhhhc----cc-ccc-ccccCCCCCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFA-AALTSDPVWVMNVVPARKS-STLSVIYDR----GL-IGV-YHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFa-AaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-iG~-~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
.+|||+|||.|.++ +.+..... +|+-.|.. ..+..+-++ |. +-. ..|.. .++.-+.+||+|.+..++.
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIR-KLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTT-SCCSCTTCEEEEEECSCGG
T ss_pred CEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchh-hCCCCCCceeEEEEcChHH
Confidence 58999999999984 44444443 23333332 333333332 21 111 12222 2331137999999987776
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+. .-+...+|-|+-|+|+|||.+++.+
T Consensus 101 ~~~-------~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 101 HMR-------KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp GSC-------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCC-------HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 541 1235678999999999999999974
No 261
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=97.38 E-value=2.3e-05 Score=79.85 Aligned_cols=98 Identities=10% Similarity=0.230 Sum_probs=63.8
Q ss_pred CCeeeEeecCCCccchhhhccC--CC--eeEEEecCCCCCCchhHhhh----cccc----ccccccCCCCCCCCCccchh
Q 009719 372 PAIRNIMDMNAFFGGFAAALTS--DP--VWVMNVVPARKSSTLSVIYD----RGLI----GVYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~--~~--VwvMnvvp~~~~ntl~vi~e----RGLi----G~~hdwce~fstYPrtyDLi 439 (527)
...+.|+|+|||.|.++.+|.+ .. |.++-+ +..+..+-+ .|+- =+-+|.-+.=.++|.+||+|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-----PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-----HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-----HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEE
Confidence 3568999999999999999865 23 333332 333333333 2431 12233222100257899999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+..++-.|. + =....+|-++=|.|+|||.++|.|
T Consensus 253 ~~~~vlh~~~------~-~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 253 WMSQFLDCFS------E-EEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EEESCSTTSC------H-HHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEechhhhCC------H-HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999988774 1 123467889999999999999865
No 262
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.38 E-value=0.00011 Score=70.26 Aligned_cols=54 Identities=11% Similarity=-0.011 Sum_probs=38.3
Q ss_pred EeeccccCCCC-----CCCcccEEEecCcccccccC--------hHHHHHHHhhcccCCcEEEEecC
Q 009719 182 VAMLGTRRLPF-----PAFSFDIVHCSRCLIPFTAY--------NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 182 ~~v~dae~LPF-----pD~SFDlV~cs~~l~hw~d~--------~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.++|...... ++++||+|+|.-.+++..+. ...++.++.|+|||||+++++..
T Consensus 149 ~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 149 IRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp EEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred eeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCc
Confidence 66677655221 45689999998655444321 12499999999999999999654
No 263
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.37 E-value=2.4e-05 Score=80.31 Aligned_cols=94 Identities=17% Similarity=0.193 Sum_probs=62.3
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc---------c-c----cc-cccccCCCCC-----
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR---------G-L----IG-VYHDWCEPFS----- 430 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR---------G-L----iG-~~hdwce~fs----- 430 (527)
..|||+|||.|.++..|.+. .. .|+-+|-. ..+..+-++ | + +- +..|..+ +.
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~-l~~~~~~ 160 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHG---KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIEN-LATAEPE 160 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTC---EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTC-GGGCBSC
T ss_pred CEEEEecCccCHHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHH-hhhcccC
Confidence 47999999999988887543 22 22223322 455555554 4 1 11 1223332 20
Q ss_pred CCC-CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 431 TYP-RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 431 tYP-rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+| .+||+|++..++.... +...+|-|+-|+|||||++++.+
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~---------d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLST---------NKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCS---------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCC---------CHHHHHHHHHHHcCCCCEEEEEE
Confidence 234 7999999999888653 24689999999999999999975
No 264
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=97.37 E-value=5.6e-05 Score=74.76 Aligned_cols=95 Identities=14% Similarity=0.033 Sum_probs=62.8
Q ss_pred CCeeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----cccc---c-cccccCCCCCCCC-Cccchhh
Q 009719 372 PAIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGLI---G-VYHDWCEPFSTYP-RTYDLIH 440 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGLi---G-~~hdwce~fstYP-rtyDLiH 440 (527)
..-.+|||+|||.|.++..|.+. ..-| +-+|-. ..+..+-+ .|+- - +..|.. .++ +| .+||+|.
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~-~~~~~fD~V~ 190 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRV---EGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DTP-FDKGAVTASW 190 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCC-CCTTCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEE---EEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cCC-CCCCCEeEEE
Confidence 34468999999999999998765 3322 222322 34444433 3432 1 122322 222 44 8999999
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+..++... +...+|-|+-|+|+|||.+++.+
T Consensus 191 ~~~~l~~~----------~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 191 NNESTMYV----------DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EESCGGGS----------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCchhhC----------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 98877643 26889999999999999999874
No 265
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.37 E-value=6.8e-05 Score=71.30 Aligned_cols=127 Identities=14% Similarity=0.303 Sum_probs=74.4
Q ss_pred eeeEeecCCCccchhhhccC--CCeeEEEecCCCCC-CchhHhhh----ccc---ccc-ccccCCCCC-CCCCccchhhh
Q 009719 374 IRNIMDMNAFFGGFAAALTS--DPVWVMNVVPARKS-STLSVIYD----RGL---IGV-YHDWCEPFS-TYPRTYDLIHV 441 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~--~~VwvMnvvp~~~~-ntl~vi~e----RGL---iG~-~hdwce~fs-tYPrtyDLiHa 441 (527)
-.+|||+|||.|.++.+|.. ...- |+-.|.. ..+..+-+ .|+ |-+ ..|..+.++ ..+.+||+|.+
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIH---VTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCE---EEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 46899999999999999876 3222 2223322 33333322 343 111 223333333 33579999987
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-----------------HHHHHHHHHH----HhcCCcee
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-----------------PEVIDKVSRI----ANTVRWTA 500 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-----------------~~~~~~i~~i----~~~l~W~~ 500 (527)
+.-.. ....++-++-|+|||||.+++.+- ......++++ ...-+++.
T Consensus 149 ~~~~~------------~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 216 (232)
T 3ntv_A 149 DAAKA------------QSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTT 216 (232)
T ss_dssp ETTSS------------SHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred cCcHH------------HHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEE
Confidence 53222 245678888999999999999531 1122333333 44456776
Q ss_pred EEecCCCCCCCCceEEEEEec
Q 009719 501 AVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 501 ~~~~~e~~~~~~ekiLi~~K~ 521 (527)
..... .+.+.+++|+
T Consensus 217 ~~lp~------~dG~~i~~k~ 231 (232)
T 3ntv_A 217 NFLNI------DDGLAISIKG 231 (232)
T ss_dssp EEECS------TTCEEEEEEC
T ss_pred EEEEc------CCceEEEEEC
Confidence 66522 3578888885
No 266
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.37 E-value=0.00015 Score=70.58 Aligned_cols=137 Identities=14% Similarity=0.061 Sum_probs=80.0
Q ss_pred eeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHh----hhccc--cccccccCCCCC---CCCCccchhhhc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVI----YDRGL--IGVYHDWCEPFS---TYPRTYDLIHVS 442 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi----~eRGL--iG~~hdwce~fs---tYPrtyDLiHa~ 442 (527)
-.+|+|+|||.|.++..|... ..-|.-|=+.. ..+.++ -+-|+ +-++|.--|.+. .+..+||+|-+.
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATR--KKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCH--HHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 458999999999887776432 33333332221 222222 22355 333332223332 244789999874
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC---CHHHHHHHHHHHhcCCceeEEe-cC-CCCCCCCceEEE
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD---SPEVIDKVSRIANTVRWTAAVH-DK-EPGSNGREKILV 517 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird---~~~~~~~i~~i~~~l~W~~~~~-~~-e~~~~~~ekiLi 517 (527)
.+ .++..++-++-|+|+|||.+++-. ..+.+..+++.++.+-++.... +. -++....-.+++
T Consensus 159 a~-------------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~ 225 (249)
T 3g89_A 159 AV-------------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVV 225 (249)
T ss_dssp SS-------------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEE
T ss_pred Cc-------------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEE
Confidence 22 234678888999999999888743 3566777777778888876432 11 222233445667
Q ss_pred EEeccCCC
Q 009719 518 ATKSLWKL 525 (527)
Q Consensus 518 ~~K~~w~~ 525 (527)
.+|.=.++
T Consensus 226 ~~k~~~t~ 233 (249)
T 3g89_A 226 LEKTAPTP 233 (249)
T ss_dssp EEECSCCC
T ss_pred EEeCCCCC
Confidence 77764443
No 267
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.37 E-value=0.00017 Score=72.14 Aligned_cols=90 Identities=16% Similarity=0.110 Sum_probs=58.0
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHcC---------CCcEEeeccccCCCC--CCCcccEEEecCccccccc
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERG---------IPAFVAMLGTRRLPF--PAFSFDIVHCSRCLIPFTA 211 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg---------~pa~~~v~dae~LPF--pD~SFDlV~cs~~l~hw~d 211 (527)
|.++..|+.. ++. .+...|.++.+++.|+++. ..+.+..+|+..+++ ++++||+|++.....+++.
T Consensus 107 G~~~~~l~~~~~~~--~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~~ 184 (304)
T 3bwc_A 107 GGVLREVLRHGTVE--HCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPA 184 (304)
T ss_dssp SHHHHHHHTCTTCC--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC------
T ss_pred CHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEECCCCccccc
Confidence 4444445544 121 2333477788999988753 225667788777665 5899999999765533332
Q ss_pred Ch---HHHHHHHhhcccCCcEEEEecC
Q 009719 212 YN---ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 212 ~~---~~aL~Ei~RVLRPGG~lviS~p 235 (527)
.. ..++.++.|+|||||.|++...
T Consensus 185 ~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 185 SKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp ---CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 21 2489999999999999999765
No 268
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.37 E-value=8.8e-05 Score=70.24 Aligned_cols=65 Identities=18% Similarity=0.277 Sum_probs=49.6
Q ss_pred cChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCc-ccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecCC
Q 009719 164 DSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFS-FDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 164 D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~S-FDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
|.++.+++.|+++ ++ ...+..+|. .+++++++ ||+|++..++.++. .++.|+|||||+++++.++
T Consensus 121 D~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~~~~~~-------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 121 ERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTAGAPKIP-------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp ESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECSBBSSCC-------HHHHHTEEEEEEEEEEECS
T ss_pred eCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECCcHHHHH-------HHHHHhcCCCcEEEEEEec
Confidence 6677888888764 43 345666676 56777665 99999998887654 3789999999999999874
No 269
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.36 E-value=0.00014 Score=73.11 Aligned_cols=94 Identities=16% Similarity=0.139 Sum_probs=60.4
Q ss_pred cChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEec------Cccccccc-------C--------hHHHH
Q 009719 164 DSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCS------RCLIPFTA-------Y--------NATYL 217 (527)
Q Consensus 164 D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs------~~l~hw~d-------~--------~~~aL 217 (527)
|.++.+++.|+++ |+ .+.+..+|+..++..+++||+|++. ..+.+-++ . ...+|
T Consensus 150 D~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L 229 (315)
T 1ixk_A 150 DVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLL 229 (315)
T ss_dssp CSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHH
Confidence 7778888877654 65 4567778888887767899999973 12222111 1 13589
Q ss_pred HHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEE
Q 009719 218 IEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYEL 260 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~ 260 (527)
.++.|+|||||+|++++-......+. +.++.+.+...++.
T Consensus 230 ~~~~~~LkpGG~lv~stcs~~~~Ene---~~v~~~l~~~~~~~ 269 (315)
T 1ixk_A 230 EKGLEVLKPGGILVYSTCSLEPEENE---FVIQWALDNFDVEL 269 (315)
T ss_dssp HHHHHHEEEEEEEEEEESCCCGGGTH---HHHHHHHHHSSEEE
T ss_pred HHHHHhCCCCCEEEEEeCCCChHHhH---HHHHHHHhcCCCEE
Confidence 99999999999999988644332222 23444445444443
No 270
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.36 E-value=8.2e-05 Score=72.16 Aligned_cols=105 Identities=11% Similarity=0.041 Sum_probs=65.2
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIE 219 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~E 219 (527)
|.++..+...+. .+...|.++.+++.|+++ ++...+..++... ++++++||+|+|+...++ ...++.+
T Consensus 132 G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~~~~----~~~~l~~ 203 (254)
T 2nxc_A 132 GVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYAEL----HAALAPR 203 (254)
T ss_dssp SHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCHHH----HHHHHHH
T ss_pred cHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh-cCcCCCCCEEEECCcHHH----HHHHHHH
Confidence 444444555554 233336666777777653 5445566666544 366789999999765432 2348999
Q ss_pred HhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEee
Q 009719 220 VDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIA 262 (527)
Q Consensus 220 i~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~ 262 (527)
+.|+|||||++++++... ..-+.+.+..+...++...
T Consensus 204 ~~~~LkpgG~lils~~~~------~~~~~v~~~l~~~Gf~~~~ 240 (254)
T 2nxc_A 204 YREALVPGGRALLTGILK------DRAPLVREAMAGAGFRPLE 240 (254)
T ss_dssp HHHHEEEEEEEEEEEEEG------GGHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCCCCEEEEEeecc------CCHHHHHHHHHHCCCEEEE
Confidence 999999999999987521 1233455555555565543
No 271
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.35 E-value=6.6e-05 Score=73.86 Aligned_cols=113 Identities=11% Similarity=0.127 Sum_probs=71.2
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccccccccccCCCCCCC--CCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGLIGVYHDWCEPFSTY--PRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGLiG~~hdwce~fstY--PrtyDLiHa~~~fs~ 447 (527)
..|||+|||.|+|+.++....-- .|+-.|.. ..+..+-+ .|+-...+-.|.-...+ +.+||+|.++..+.
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~~- 203 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVVR- 203 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCSS-
T ss_pred CEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCchh-
Confidence 47999999999999887543211 23333333 33443332 24432111112211122 57899998753322
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeCC-------HHHHHHHHHHHhcCCceeEE
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-------PEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-------~~~~~~i~~i~~~l~W~~~~ 502 (527)
...++-++-|+|+|||.+++.+. .+.++++.+.++...|++..
T Consensus 204 ------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 204 ------------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ------------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ------------HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 25678889999999999999642 35678888999999998876
No 272
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.35 E-value=0.00021 Score=71.99 Aligned_cols=65 Identities=20% Similarity=0.161 Sum_probs=47.4
Q ss_pred HHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCccccc--ccChHHHHHHHhhcccCCcEEEEe
Q 009719 169 QIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPF--TAYNATYLIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 169 qvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw--~d~~~~aL~Ei~RVLRPGG~lviS 233 (527)
+++.|+++ +.. +.+..++++.+++++++||+|+|.....+. ......+|.++.|+|||||+++.+
T Consensus 72 ~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 72 IIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred HHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 56655543 543 567788999999999999999998533222 223334899999999999999843
No 273
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.34 E-value=4.4e-05 Score=77.01 Aligned_cols=95 Identities=15% Similarity=0.164 Sum_probs=58.2
Q ss_pred eeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHh----hhccc---cccccccCCCCCCCC-CccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVI----YDRGL---IGVYHDWCEPFSTYP-RTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi----~eRGL---iG~~hdwce~fstYP-rtyDLiHa~~~f 445 (527)
.+|||+|||.|.++..+.+.+. -|.-|=.. ..+..+ -+.|+ |-+.+.--+.++ .| ..||+|.+..+.
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s---~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGAKHVIGVDMS---SIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWMG 115 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCSEEEEEESS---THHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCCB
T ss_pred CEEEEecCccHHHHHHHHHCCCCEEEEEChH---HHHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCch
Confidence 4899999999999888866543 23333222 123322 23354 223332222232 45 789999987554
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
.... +.-.+..+|-+++|+|+|||.++.
T Consensus 116 ~~l~------~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 116 YFLL------YESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TTBS------TTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhcc------cHHHHHHHHHHHHhhcCCCeEEEE
Confidence 3322 222456788899999999999984
No 274
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.34 E-value=8.8e-05 Score=74.66 Aligned_cols=72 Identities=11% Similarity=0.012 Sum_probs=54.2
Q ss_pred cChHHHHHHHHHcC--C---CcEEeeccccCCC----CC--CCccc-----EEEecCcccccccCh--HHHHHHHhhccc
Q 009719 164 DSHKAQIQFALERG--I---PAFVAMLGTRRLP----FP--AFSFD-----IVHCSRCLIPFTAYN--ATYLIEVDRLLR 225 (527)
Q Consensus 164 D~seaqvq~A~eRg--~---pa~~~v~dae~LP----Fp--D~SFD-----lV~cs~~l~hw~d~~--~~aL~Ei~RVLR 225 (527)
|.++.|++.|+++- . ...+.++|...++ .+ +++|| +|+++.+|||.++.. ..+|+++.++|+
T Consensus 112 D~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~ 191 (277)
T 3giw_A 112 DNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLP 191 (277)
T ss_dssp ECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSC
T ss_pred eCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCC
Confidence 88899999998762 1 2567788877752 22 56777 577888887666643 359999999999
Q ss_pred CCcEEEEecC
Q 009719 226 PGGYLVISGP 235 (527)
Q Consensus 226 PGG~lviS~p 235 (527)
|||+|+++.-
T Consensus 192 PGG~Lvls~~ 201 (277)
T 3giw_A 192 SGSYLAMSIG 201 (277)
T ss_dssp TTCEEEEEEE
T ss_pred CCcEEEEEec
Confidence 9999999864
No 275
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.33 E-value=4.1e-05 Score=74.62 Aligned_cols=63 Identities=13% Similarity=0.174 Sum_probs=43.7
Q ss_pred CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC----------------HHHHHHHHHHHhcCC
Q 009719 434 RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS----------------PEVIDKVSRIANTVR 497 (527)
Q Consensus 434 rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~----------------~~~~~~i~~i~~~l~ 497 (527)
.+||+|-+..+|.... .+--+...+|-|+-|+|||||++++.+. .-..+.++++++.--
T Consensus 173 ~~fD~V~~~~~l~~~~-----~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 247 (289)
T 2g72_A 173 LPADALVSAFCLEAVS-----PDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSG 247 (289)
T ss_dssp SSEEEEEEESCHHHHC-----SSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTT
T ss_pred CCCCEEEehhhhhhhc-----CCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcC
Confidence 6799999998887532 0011356789999999999999999631 012556777776666
Q ss_pred ceeE
Q 009719 498 WTAA 501 (527)
Q Consensus 498 W~~~ 501 (527)
++..
T Consensus 248 f~~~ 251 (289)
T 2g72_A 248 YKVR 251 (289)
T ss_dssp EEEE
T ss_pred CeEE
Confidence 6543
No 276
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.33 E-value=5.8e-05 Score=70.73 Aligned_cols=110 Identities=11% Similarity=0.048 Sum_probs=67.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----ccc---ccc-cccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLI---GVY-HDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLi---G~~-hdwce~fstYPrtyDLiHa~~~f 445 (527)
..|||+|||.|.++.+|.....-| +-.|-. ..+..+-++ |+- -++ .|..+.+... ..||+|-+...
T Consensus 57 ~~vLDlGcG~G~~~~~la~~~~~v---~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~- 131 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLAGGRA---ITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPEAVFIGGG- 131 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCSEEEECSC-
T ss_pred CEEEEecCCCCHHHHHHHHcCCEE---EEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCCEEEECCc-
Confidence 579999999999998886654323 223322 344443332 432 111 2222222222 36888765421
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCceeEE
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~~~~ 502 (527)
.... ++-|+-|+|||||.+++.. ..+.+.++.++++...+++..
T Consensus 132 ------------~~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 132 ------------GSQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp ------------CCHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEE
T ss_pred ------------ccHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEE
Confidence 1345 8899999999999999986 456677777777766666543
No 277
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.32 E-value=0.00012 Score=73.93 Aligned_cols=98 Identities=14% Similarity=0.266 Sum_probs=63.8
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC--C--eeEEEecCCCCCCchhHhhhc----cccc----cccccCCCCCCCCCcc
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD--P--VWVMNVVPARKSSTLSVIYDR----GLIG----VYHDWCEPFSTYPRTY 436 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~--~--VwvMnvvp~~~~ntl~vi~eR----GLiG----~~hdwce~fstYPrty 436 (527)
+......+|+|+|||.|.++.+|.+. . +..+-+ +..+..+-++ |+-+ +-+|..+. .+|. +
T Consensus 186 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~-~ 257 (359)
T 1x19_A 186 AKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-----PGAIDLVNENAAEKGVADRMRGIAVDIYKE--SYPE-A 257 (359)
T ss_dssp CCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-----GGGHHHHHHHHHHTTCTTTEEEEECCTTTS--CCCC-C
T ss_pred cCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-----HHHHHHHHHHHHhcCCCCCEEEEeCccccC--CCCC-C
Confidence 44456689999999999999998643 2 333333 3334443332 5422 22333321 2343 4
Q ss_pred chhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 437 DLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
|+|.+..++-.|. .-....+|-++-|+|+|||.++|-|
T Consensus 258 D~v~~~~vlh~~~-------d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 258 DAVLFCRILYSAN-------EQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp SEEEEESCGGGSC-------HHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CEEEEechhccCC-------HHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 9999999988774 1124678999999999999998865
No 278
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.31 E-value=4.7e-05 Score=73.32 Aligned_cols=72 Identities=10% Similarity=0.061 Sum_probs=48.9
Q ss_pred eeEEeeccCcChHHHHHHHHHcCCCcEEeeccccC---CCCCCC-cccEEEecCcccccccChHHHHHHHhh-cccCCcE
Q 009719 155 ILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRR---LPFPAF-SFDIVHCSRCLIPFTAYNATYLIEVDR-LLRPGGY 229 (527)
Q Consensus 155 V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~---LPFpD~-SFDlV~cs~~l~hw~d~~~~aL~Ei~R-VLRPGG~ 229 (527)
|+++++++ .+++.|+.....+.+.++|+.. ||+.++ +||+|++... | .....+|.|+.| +|||||+
T Consensus 112 V~gvD~s~-----~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~--~--~~~~~~l~~~~r~~LkpGG~ 182 (236)
T 2bm8_A 112 VIGIDRDL-----SRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA--H--ANTFNIMKWAVDHLLEEGDY 182 (236)
T ss_dssp EEEEESCC-----TTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS--C--SSHHHHHHHHHHHTCCTTCE
T ss_pred EEEEeCCh-----HHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc--h--HhHHHHHHHHHHhhCCCCCE
Confidence 44555444 4455554333346677888877 476544 7999998654 4 233349999998 9999999
Q ss_pred EEEecC
Q 009719 230 LVISGP 235 (527)
Q Consensus 230 lviS~p 235 (527)
|++...
T Consensus 183 lv~~d~ 188 (236)
T 2bm8_A 183 FIIEDM 188 (236)
T ss_dssp EEECSC
T ss_pred EEEEeC
Confidence 999753
No 279
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.30 E-value=0.00015 Score=69.80 Aligned_cols=132 Identities=14% Similarity=0.150 Sum_probs=75.6
Q ss_pred eeeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc----cccc----cccccCCCCCCCC--Cccchh
Q 009719 374 IRNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR----GLIG----VYHDWCEPFSTYP--RTYDLI 439 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR----GLiG----~~hdwce~fstYP--rtyDLi 439 (527)
-++|||+|||.|.++.+|... ..-|. -+|.. ..+..+-++ |+-. +..|..+.++..+ .+||+|
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~---~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLL---TLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEE---EEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEE---EEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 468999999999999888664 22222 22222 334443333 4421 1223333233333 389999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH------------HHHHHHHH----HHhcCCceeEEe
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------------EVIDKVSR----IANTVRWTAAVH 503 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~------------~~~~~i~~----i~~~l~W~~~~~ 503 (527)
.++.-... ...++-++-|+|||||++|+.+-. .....+++ +...-+|+....
T Consensus 141 ~~d~~~~~------------~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 208 (248)
T 3tfw_A 141 FIDADKPN------------NPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATAL 208 (248)
T ss_dssp EECSCGGG------------HHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred EECCchHH------------HHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEe
Confidence 87643222 245777888999999999997521 12223333 344556776554
Q ss_pred cCCCCCCCCceEEEEEec
Q 009719 504 DKEPGSNGREKILVATKS 521 (527)
Q Consensus 504 ~~e~~~~~~ekiLi~~K~ 521 (527)
-.- +....+.+.+++|+
T Consensus 209 ~~~-g~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 209 QTV-GTKGWDGFTLAWVN 225 (248)
T ss_dssp EEC-STTCSEEEEEEEEC
T ss_pred ecC-CCCCCCeeEEEEEe
Confidence 111 22345789999885
No 280
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.30 E-value=9.2e-05 Score=70.68 Aligned_cols=67 Identities=18% Similarity=0.179 Sum_probs=48.9
Q ss_pred cChHHHHHHHHHc----CCC---cEEeeccccC-CC-CCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP---AFVAMLGTRR-LP-FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p---a~~~v~dae~-LP-FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.+++.|+++ |+. +.+..+|+.. ++ +++++||+|++.....+ ...++.++.|+|||||++++..
T Consensus 88 D~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~~~~----~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 88 DPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVSPMD----LKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCCTTT----HHHHHHHHHHHEEEEEEEEETT
T ss_pred ECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCcHHH----HHHHHHHHHHHcCCCcEEEEeC
Confidence 7778888888754 554 5566777644 44 45899999998754322 2238999999999999999954
No 281
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.30 E-value=2.7e-05 Score=75.04 Aligned_cols=100 Identities=15% Similarity=0.069 Sum_probs=61.1
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc---cccc-cccCCCCCC-CCCccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL---IGVY-HDWCEPFST-YPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL---iG~~-hdwce~fst-YPrtyDLiHa~~~ 444 (527)
.+|||+|||.|.++..|...+.. +|+-+|-. ..+..+-++ |+ +-+. .|..+ ++. -+.+||+|.+..+
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGIG--EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYG-RHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTCS--EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTT-SCCCCSSCEEEEEEESC
T ss_pred CeEEEECCCCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccc-cccCCCCCcCEEEECch
Confidence 58999999999999888765431 22223322 334433333 32 2222 22222 221 2479999999877
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
+.... .+.-+...+|-|+-|+|+|||.+++...
T Consensus 143 l~~~~-----~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 143 FHYAF-----STSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp GGGGG-----SSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhhc-----CCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 64310 0122346789999999999999999863
No 282
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.30 E-value=0.00012 Score=69.57 Aligned_cols=67 Identities=12% Similarity=0.201 Sum_probs=49.8
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccC-CC-CCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRR-LP-FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~-LP-FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.+++.|+++ ++ .+.+..+|+.. +| +.+++||+|++.... .....++.++.|+|||||+|++..
T Consensus 102 D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~----~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 102 ERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAAK----AQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp ECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETTS----SSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCcH----HHHHHHHHHHHHhcCCCeEEEEee
Confidence 6778888888764 44 35677788754 56 668999999976432 222349999999999999999854
No 283
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.28 E-value=6e-05 Score=70.45 Aligned_cols=66 Identities=20% Similarity=0.154 Sum_probs=51.6
Q ss_pred cChHHHHHHHHHc----C-----C-CcEEeeccccCCC----CCCCcccEEEecCcccccccChHHHHHHHhhcccCCcE
Q 009719 164 DSHKAQIQFALER----G-----I-PAFVAMLGTRRLP----FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGY 229 (527)
Q Consensus 164 D~seaqvq~A~eR----g-----~-pa~~~v~dae~LP----FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~ 229 (527)
|.++.+++.|+++ + . .+.+..+|....+ +++++||+|++...++| ++.++.++|||||+
T Consensus 116 D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~-------~~~~~~~~LkpgG~ 188 (227)
T 2pbf_A 116 ERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASE-------LPEILVDLLAENGK 188 (227)
T ss_dssp ESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSS-------CCHHHHHHEEEEEE
T ss_pred eCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCCCcCEEEECCchHH-------HHHHHHHhcCCCcE
Confidence 6677888888765 3 2 3567778887766 77889999999987755 35788999999999
Q ss_pred EEEecCC
Q 009719 230 LVISGPP 236 (527)
Q Consensus 230 lviS~pp 236 (527)
++++.++
T Consensus 189 lv~~~~~ 195 (227)
T 2pbf_A 189 LIIPIEE 195 (227)
T ss_dssp EEEEEEE
T ss_pred EEEEEcc
Confidence 9998763
No 284
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.27 E-value=2.4e-05 Score=75.71 Aligned_cols=80 Identities=15% Similarity=0.145 Sum_probs=47.5
Q ss_pred hhccccccccCCe-eEEeeccCcChHHHHHHHHHcCCCcEE------eeccccCCC---CCCCcccEEEecCcccccccC
Q 009719 143 VASFGGSMLSENI-LTLSFAPRDSHKAQIQFALERGIPAFV------AMLGTRRLP---FPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 143 vgsfga~Ll~r~V-~~msiAp~D~seaqvq~A~eRg~pa~~------~v~dae~LP---FpD~SFDlV~cs~~l~hw~d~ 212 (527)
+|.++..|+.++. .+..+ |.++.|++.|+++...... .......++ |.+.+||++++ ++
T Consensus 48 tG~~t~~la~~g~~~V~gv---Dis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~-----~l--- 116 (232)
T 3opn_A 48 TGGFTDVMLQNGAKLVYAL---DVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFI-----SL--- 116 (232)
T ss_dssp TSHHHHHHHHTTCSEEEEE---CSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSS-----CG---
T ss_pred CCHHHHHHHhcCCCEEEEE---cCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhh-----hH---
Confidence 5666667777764 33333 6667777777775432211 111112222 34455555543 33
Q ss_pred hHHHHHHHhhcccCCcEEEEec
Q 009719 213 NATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 213 ~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
..+|.|+.|+|||||+|++..
T Consensus 117 -~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 117 -DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp -GGTHHHHHHHSCTTCEEEEEE
T ss_pred -HHHHHHHHHhccCCCEEEEEE
Confidence 249999999999999999974
No 285
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.27 E-value=0.00028 Score=68.59 Aligned_cols=77 Identities=13% Similarity=0.102 Sum_probs=54.1
Q ss_pred eeccCcChHHHHHHHHHcC-------CC--cEEeeccccCC-------CCCCCcccEEEecCccc---------------
Q 009719 159 SFAPRDSHKAQIQFALERG-------IP--AFVAMLGTRRL-------PFPAFSFDIVHCSRCLI--------------- 207 (527)
Q Consensus 159 siAp~D~seaqvq~A~eRg-------~p--a~~~v~dae~L-------PFpD~SFDlV~cs~~l~--------------- 207 (527)
.+...|.++.+++.|+++- +. +.+..+|...+ +|++++||+|+|.--..
T Consensus 62 ~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a 141 (260)
T 2ozv_A 62 EVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEA 141 (260)
T ss_dssp EEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC----------------
T ss_pred eEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHH
Confidence 3444477889999998753 22 45677887776 47899999999972221
Q ss_pred -ccc-cChHHHHHHHhhcccCCcEEEEecC
Q 009719 208 -PFT-AYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 208 -hw~-d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.. .....++.++.++|||||+|++..+
T Consensus 142 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 142 HAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp -----CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 111 1233489999999999999999776
No 286
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.27 E-value=0.00011 Score=74.71 Aligned_cols=110 Identities=13% Similarity=0.152 Sum_probs=65.3
Q ss_pred HHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHhh----hccc---cccccccCCCCCC
Q 009719 360 YYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVIY----DRGL---IGVYHDWCEPFST 431 (527)
Q Consensus 360 ~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi~----eRGL---iG~~hdwce~fst 431 (527)
.|.+.+...+....=.+|||+|||.|.++..+...+. -|.-|=+. ..+..+- +.|+ |-+.+.=-+.+ .
T Consensus 37 ~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s---~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~ 112 (348)
T 2y1w_A 37 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAS---TMAQHAEVLVKSNNLTDRIVVIPGKVEEV-S 112 (348)
T ss_dssp HHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECS---THHHHHHHHHHHTTCTTTEEEEESCTTTC-C
T ss_pred HHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCH---HHHHHHHHHHHHcCCCCcEEEEEcchhhC-C
Confidence 3554444333222235899999999999888866553 33333332 1233222 2254 22222111222 2
Q ss_pred CCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 432 YPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 432 YPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.|..||+|-+..++..+. .-.+...+.++-|+|+|||.+++.
T Consensus 113 ~~~~~D~Ivs~~~~~~~~-------~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 113 LPEQVDIIISEPMGYMLF-------NERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CSSCEEEEEECCCBTTBT-------TTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CCCceeEEEEeCchhcCC-------hHHHHHHHHHHHhhcCCCeEEEEe
Confidence 467899999987776553 123456778999999999999865
No 287
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.26 E-value=0.00013 Score=73.20 Aligned_cols=66 Identities=14% Similarity=0.027 Sum_probs=45.3
Q ss_pred cChHHHHHHHHHcC----------------CCcEEeeccccCC--CCCCCcccEEEecCcccccccChHHHHHHHhhccc
Q 009719 164 DSHKAQIQFALERG----------------IPAFVAMLGTRRL--PFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLR 225 (527)
Q Consensus 164 D~seaqvq~A~eRg----------------~pa~~~v~dae~L--PFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLR 225 (527)
|.++.+++.|+++. ..+.+..+|+..+ ++++++||+|++... +... ++.++.|+||
T Consensus 137 D~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~-----~~~~-~l~~~~~~Lk 210 (336)
T 2b25_A 137 EVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDML-----NPHV-TLPVFYPHLK 210 (336)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEECSS-----STTT-THHHHGGGEE
T ss_pred eCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCCCeeEEEECCC-----CHHH-HHHHHHHhcC
Confidence 66788888887641 2356677887776 688889999998532 2222 8999999999
Q ss_pred CCcEEEEecC
Q 009719 226 PGGYLVISGP 235 (527)
Q Consensus 226 PGG~lviS~p 235 (527)
|||+|++..+
T Consensus 211 pgG~lv~~~~ 220 (336)
T 2b25_A 211 HGGVCAVYVV 220 (336)
T ss_dssp EEEEEEEEES
T ss_pred CCcEEEEEeC
Confidence 9999999876
No 288
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=97.26 E-value=0.00015 Score=71.70 Aligned_cols=135 Identities=16% Similarity=0.240 Sum_probs=81.4
Q ss_pred CCeeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHhhh----ccccc----cccccCCCCCCCCCccchhhh
Q 009719 372 PAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVIYD----RGLIG----VYHDWCEPFSTYPRTYDLIHV 441 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi~e----RGLiG----~~hdwce~fstYPrtyDLiHa 441 (527)
..-.+|+|+|||.|.++.+|.+. ..-+.. .|-+..+..+-+ .|+-+ +-+|..+. .+|..||+|.+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~---~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFG---VDWASVLEVAKENARIQGVASRYHTIAGSAFEV--DYGNDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEE---EECHHHHHHHHHHHHHHTCGGGEEEEESCTTTS--CCCSCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEE---EecHHHHHHHHHHHHhcCCCcceEEEecccccC--CCCCCCcEEEE
Confidence 44578999999999999988654 222222 222223333322 24322 22333321 35666999999
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH----------H-----------------HHHHHHHHHh
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP----------E-----------------VIDKVSRIAN 494 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~----------~-----------------~~~~i~~i~~ 494 (527)
..++..+. .-....+|-++-|+|+|||+++|-|.. . ..++++++++
T Consensus 239 ~~~l~~~~-------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~ 311 (335)
T 2r3s_A 239 PNFLHHFD-------VATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFS 311 (335)
T ss_dssp ESCGGGSC-------HHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHH
T ss_pred cchhccCC-------HHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHH
Confidence 99888763 112357899999999999999886410 0 1456677777
Q ss_pred cCCceeEEecCCCCCCCCceEEEEEec
Q 009719 495 TVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 495 ~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
.--++......-.+ ...+++++++
T Consensus 312 ~aGf~~~~~~~~~~---~~~~i~~~~~ 335 (335)
T 2r3s_A 312 NAGFSHSQLHSLPT---TQQQVIVAYK 335 (335)
T ss_dssp HTTCSEEEEECCTT---SSSEEEEEEC
T ss_pred HCCCCeeeEEECCC---CceeEEEecC
Confidence 77776544322222 2367777764
No 289
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.25 E-value=2.2e-05 Score=77.16 Aligned_cols=96 Identities=9% Similarity=0.146 Sum_probs=58.5
Q ss_pred eEeecCCCccchhhhccC----CCeeEEEecCCCCC-CchhHhhhc----cccccccccCCCCCCCC-CccchhhhcCcc
Q 009719 376 NIMDMNAFFGGFAAALTS----DPVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEPFSTYP-RTYDLIHVSGIE 445 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~----~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~fstYP-rtyDLiHa~~~f 445 (527)
+|||+|||+|.++.+|.. .++-|.-| |-. .-|..+-+| |+..-..=.|.-+..+| ..||+|-+..++
T Consensus 73 ~vLDlGcGtG~~~~~la~~~~~~~~~v~gv---D~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l 149 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRNIHHDNCKIIAI---DNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTL 149 (261)
T ss_dssp EEEEETCTTTHHHHHHHHTCCSSSCEEEEE---ESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCG
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCCCEEEEE---ECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeee
Confidence 699999999999877743 23333333 322 444443332 43221111222333344 569999987766
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.... .-....+|-||-|+|+|||.+|+.|
T Consensus 150 ~~~~-------~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 150 QFLE-------PSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp GGSC-------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eecC-------chhHhHHHHHHHHHcCCCcEEEEEe
Confidence 5432 1112458899999999999999985
No 290
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.22 E-value=0.00028 Score=65.31 Aligned_cols=67 Identities=15% Similarity=0.110 Sum_probs=48.5
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|.++.+++.|+++ ++. +.+..+|+.. +|..++ ||+|++... . .....++.++.|+|||||++++...
T Consensus 88 D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~---~-~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 88 DPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD---V-FNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp ESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT---T-SCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred ECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC---h-hhhHHHHHHHHHhcCCCeEEEEECc
Confidence 6678888888754 432 4566777654 476667 999998732 2 2233499999999999999998653
No 291
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=97.22 E-value=9e-05 Score=74.25 Aligned_cols=138 Identities=12% Similarity=0.153 Sum_probs=84.8
Q ss_pred cCCCC-eeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHhh----hcccc----ccccccCCCCCCCCCccc
Q 009719 369 LGTPA-IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVIY----DRGLI----GVYHDWCEPFSTYPRTYD 437 (527)
Q Consensus 369 i~~~~-iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi~----eRGLi----G~~hdwce~fstYPrtyD 437 (527)
+.... .++|+|+|||.|.++.+|.+. .+-+..+ |-+..+..+- +.|+- -+-+|..+.-...|..||
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D 250 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIW---DLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAAD 250 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEE---ECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEE
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEE---ECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCcc
Confidence 34444 789999999999999988543 2332222 2233333332 22432 223333322111467899
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC--------H--H-----------------HHHHHH
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--------P--E-----------------VIDKVS 490 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--------~--~-----------------~~~~i~ 490 (527)
+|.+..++..|. .-....+|-++-|+|+|||.++|-|. . . ..++++
T Consensus 251 ~v~~~~vlh~~~-------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 323 (352)
T 3mcz_A 251 VVMLNDCLHYFD-------AREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIA 323 (352)
T ss_dssp EEEEESCGGGSC-------HHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHH
T ss_pred EEEEecccccCC-------HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHH
Confidence 999999998774 11235789999999999999999641 0 0 133456
Q ss_pred HHHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 491 RIANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 491 ~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
++++.--++..... .+...+++++|+
T Consensus 324 ~ll~~aGf~~~~~~-----~g~~~l~~a~kp 349 (352)
T 3mcz_A 324 GVVRDAGLAVGERS-----IGRYTLLIGQRS 349 (352)
T ss_dssp HHHHHTTCEEEEEE-----ETTEEEEEEECC
T ss_pred HHHHHCCCceeeec-----cCceEEEEEecC
Confidence 66666666655421 234678999985
No 292
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.22 E-value=6.6e-05 Score=69.93 Aligned_cols=127 Identities=16% Similarity=0.157 Sum_probs=71.3
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhhh----ccccc---cc-cccCCCCCCCC-----Cccch
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIYD----RGLIG---VY-HDWCEPFSTYP-----RTYDL 438 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~e----RGLiG---~~-hdwce~fstYP-----rtyDL 438 (527)
.+|||+|||.|.++.+|... ..-|..|=.. +..+..+-+ .|+-. ++ .|..+.++..+ .+||+
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVD--EKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESC--HHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCC--HHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 48999999999999988664 3222222111 122333222 24321 11 12222222222 68999
Q ss_pred hhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH------------HHHHHHHHH----HhcCCceeEE
Q 009719 439 IHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------------EVIDKVSRI----ANTVRWTAAV 502 (527)
Q Consensus 439 iHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~------------~~~~~i~~i----~~~l~W~~~~ 502 (527)
|.++.-.. ....++-++=|+|+|||++++.|-. .....++++ ...-+|+...
T Consensus 144 v~~~~~~~------------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 211 (225)
T 3tr6_A 144 IYIDADKA------------NTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMIL 211 (225)
T ss_dssp EEECSCGG------------GHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred EEECCCHH------------HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEE
Confidence 98654322 2345777888999999999998621 112233333 4444677666
Q ss_pred ecCCCCCCCCceEEEEEec
Q 009719 503 HDKEPGSNGREKILVATKS 521 (527)
Q Consensus 503 ~~~e~~~~~~ekiLi~~K~ 521 (527)
... .+.+++++|+
T Consensus 212 lp~------~dG~~~~~k~ 224 (225)
T 3tr6_A 212 IPI------GDGLTLARKK 224 (225)
T ss_dssp ECS------TTCEEEEEEC
T ss_pred EEc------CCccEEEEEC
Confidence 522 3568888885
No 293
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=97.21 E-value=6.9e-05 Score=76.42 Aligned_cols=137 Identities=12% Similarity=0.155 Sum_probs=86.5
Q ss_pred ccCCCCeeeEeecCCCccchhhhccCC--C--eeEEEecCCCCCCchhHh----hhcccc----ccccccCCCCCCCCCc
Q 009719 368 KLGTPAIRNIMDMNAFFGGFAAALTSD--P--VWVMNVVPARKSSTLSVI----YDRGLI----GVYHDWCEPFSTYPRT 435 (527)
Q Consensus 368 ~i~~~~iRnvmDm~ag~GgFaAaL~~~--~--VwvMnvvp~~~~ntl~vi----~eRGLi----G~~hdwce~fstYPrt 435 (527)
.+......+|+|+|||.|.++.+|.+. . +.+.-+ +..+..+ -+.|+- =+-+|..++ +|..
T Consensus 197 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~p~~ 268 (369)
T 3gwz_A 197 AYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-----PPVAEEARELLTGRGLADRCEILPGDFFET---IPDG 268 (369)
T ss_dssp HSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-----HHHHHHHHHHHHHTTCTTTEEEEECCTTTC---CCSS
T ss_pred hCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-----HHHHHHHHHhhhhcCcCCceEEeccCCCCC---CCCC
Confidence 445667799999999999999998653 2 333333 2223322 223431 123344433 4568
Q ss_pred cchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH------------H------------HHHHHHH
Q 009719 436 YDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------------E------------VIDKVSR 491 (527)
Q Consensus 436 yDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~------------~------------~~~~i~~ 491 (527)
||+|-+..++..|. + =....+|-++=|+|+|||+++|-|.. + ..+++++
T Consensus 269 ~D~v~~~~vlh~~~------d-~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ 341 (369)
T 3gwz_A 269 ADVYLIKHVLHDWD------D-DDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAA 341 (369)
T ss_dssp CSEEEEESCGGGSC------H-HHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHH
T ss_pred ceEEEhhhhhccCC------H-HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHH
Confidence 99999999998774 1 11135899999999999999996410 0 1455677
Q ss_pred HHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 492 IANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 492 i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
+++.--++....... ......|+.|+|.
T Consensus 342 ll~~aGf~~~~~~~~--~~~~~svie~~~a 369 (369)
T 3gwz_A 342 LLEKSGLRVERSLPC--GAGPVRIVEIRRA 369 (369)
T ss_dssp HHHTTTEEEEEEEEC--SSSSEEEEEEEEC
T ss_pred HHHHCCCeEEEEEEC--CCCCcEEEEEEeC
Confidence 777777876544221 1234578888763
No 294
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.19 E-value=0.00022 Score=66.36 Aligned_cols=124 Identities=12% Similarity=0.160 Sum_probs=71.4
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhh----ccc--ccc-ccccCCCCCC-C-CCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYD----RGL--IGV-YHDWCEPFST-Y-PRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~e----RGL--iG~-~hdwce~fst-Y-PrtyDLiHa~ 442 (527)
..|||+|||.|.|+.+|... .. +|+-+|-. ..+..+-+ .|+ +-+ ..|..+ ++. + +.+||+|.+.
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPDI---NYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLN 118 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCCSEEEEE
T ss_pred CeEEEEccCcCHHHHHHHHHCCCC---CEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEE
Confidence 46999999999999888543 22 23333322 33443333 243 212 233332 321 3 3789999986
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCceeEEe
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W~~~~~ 503 (527)
... .|.....++.+=....+|-++-|+|+|||.+++.. ..+....+.+++....|+....
T Consensus 119 ~~~-~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 119 FSD-PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp SCC-CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCC-CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeec
Confidence 321 12100000111123568899999999999999974 5566677777766666765443
No 295
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.17 E-value=0.00017 Score=72.45 Aligned_cols=140 Identities=22% Similarity=0.293 Sum_probs=83.5
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHhhh----cccc----ccccccCCCCCCCCCccch
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVIYD----RGLI----GVYHDWCEPFSTYPRTYDL 438 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi~e----RGLi----G~~hdwce~fstYPrtyDL 438 (527)
+....-.+|+|+|||.|.++.+|.+. .+-+..+ |-+..+..+-+ .|+- =+-+|..++ .|..||+
T Consensus 179 ~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~ 252 (360)
T 1tw3_A 179 YDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVL---EMAGTVDTARSYLKDEGLSDRVDVVEGDFFEP---LPRKADA 252 (360)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECTTHHHHHHHHHHHTTCTTTEEEEECCTTSC---CSSCEEE
T ss_pred CCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEe---cCHHHHHHHHHHHHhcCCCCceEEEeCCCCCC---CCCCccE
Confidence 34445678999999999999888543 3333222 11333333332 3331 223444443 4666999
Q ss_pred hhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH--------H------------------HHHHHHHH
Q 009719 439 IHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP--------E------------------VIDKVSRI 492 (527)
Q Consensus 439 iHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~--------~------------------~~~~i~~i 492 (527)
+-+..++..|. + =....+|-++-|+|+|||.++|.+.. . ..++++++
T Consensus 253 v~~~~vl~~~~------~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 325 (360)
T 1tw3_A 253 IILSFVLLNWP------D-HDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGL 325 (360)
T ss_dssp EEEESCGGGSC------H-HHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHH
T ss_pred EEEcccccCCC------H-HHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHH
Confidence 99998887664 1 11246899999999999999986532 0 12456667
Q ss_pred HhcCCceeEEecCCCCC--CCCceEEEEEec
Q 009719 493 ANTVRWTAAVHDKEPGS--NGREKILVATKS 521 (527)
Q Consensus 493 ~~~l~W~~~~~~~e~~~--~~~ekiLi~~K~ 521 (527)
++.--++......-.+. .-...|+.++|.
T Consensus 326 l~~aGf~~~~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 326 AASAGLVVEEVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp HHHTTEEEEEEEEEECSSSSCEEEEEEEEEC
T ss_pred HHHCCCeEEEEEeCCCCcccCccEEEEEEeC
Confidence 77777775433211111 011568888874
No 296
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.17 E-value=0.0003 Score=71.62 Aligned_cols=90 Identities=12% Similarity=0.045 Sum_probs=60.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC---cEEeeccccCCC-C---CCCcccEEEecCc------
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP---AFVAMLGTRRLP-F---PAFSFDIVHCSRC------ 205 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p---a~~~v~dae~LP-F---pD~SFDlV~cs~~------ 205 (527)
+|.++-++..++..+ ...|.++.+++.|+++ ++. +.+.++|+..+. . .+++||+|++.--
T Consensus 164 tG~~sl~la~~ga~V---~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~ 240 (332)
T 2igt_A 164 TGVASLVAAAAGAEV---THVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGT 240 (332)
T ss_dssp TCHHHHHHHHTTCEE---EEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECT
T ss_pred cCHHHHHHHHcCCEE---EEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCc
Confidence 566666677777643 3448889999988764 443 567778876543 2 1679999998421
Q ss_pred ---ccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 206 ---LIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 206 ---l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.++.+....++.++.|+|||||+|+++..
T Consensus 241 ~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 241 HGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp TCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 112222333489999999999999887664
No 297
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.17 E-value=0.00042 Score=70.13 Aligned_cols=72 Identities=19% Similarity=0.127 Sum_probs=54.4
Q ss_pred cChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCccc-------ccccChHHHHHHHhhcccCCcEEE
Q 009719 164 DSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLI-------PFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 164 D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~-------hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
|.++.+++.|+++ |+ .+.+.++|+..+|++.++||+|+|.--.. ++.+.-..++.++.|+|||||+++
T Consensus 235 Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~ 314 (354)
T 3tma_A 235 DLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVA 314 (354)
T ss_dssp ESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEE
T ss_pred ECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEE
Confidence 6677888888754 55 36788899999999989999999953221 111111348999999999999999
Q ss_pred EecC
Q 009719 232 ISGP 235 (527)
Q Consensus 232 iS~p 235 (527)
+.++
T Consensus 315 i~t~ 318 (354)
T 3tma_A 315 LLTL 318 (354)
T ss_dssp EEES
T ss_pred EEeC
Confidence 9887
No 298
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.16 E-value=0.00059 Score=63.61 Aligned_cols=136 Identities=11% Similarity=0.113 Sum_probs=68.1
Q ss_pred eeEeecCCCccchhhhccCCCeeE--EEecCCCCCCchhHhhhccccccccccCCCCCC-------CC----Cccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWV--MNVVPARKSSTLSVIYDRGLIGVYHDWCEPFST-------YP----RTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~Vwv--Mnvvp~~~~ntl~vi~eRGLiG~~hdwce~fst-------YP----rtyDLiHa 441 (527)
.+|||+|||.|+|+..|.+..--| +-+.|..... |+-=+..|..+. .+ ++ .+||+|-+
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~~--------~v~~~~~D~~~~-~~~~~~~~~~~~~~~~~~D~Vls 97 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEIA--------GVRFIRCDIFKE-TIFDDIDRALREEGIEKVDDVVS 97 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCCT--------TCEEEECCTTSS-SHHHHHHHHHHHHTCSSEEEEEE
T ss_pred CEEEEEeecCCHHHHHHHHcCCcEEEEeccccccCC--------CeEEEEccccCH-HHHHHHHHHhhcccCCcceEEec
Confidence 689999999999999998775333 3444432111 221122232221 10 11 37999887
Q ss_pred cCccccccC--CCCCCCCCcccccceeecccccCCcEEEEeC--CHHHHHHHHHHHhcCCcee-EEe-cCCCCCCCCceE
Q 009719 442 SGIESLIKN--PGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD--SPEVIDKVSRIANTVRWTA-AVH-DKEPGSNGREKI 515 (527)
Q Consensus 442 ~~~fs~~~~--~~~~~~rC~~~~illEmDRILRP~G~~iird--~~~~~~~i~~i~~~l~W~~-~~~-~~e~~~~~~eki 515 (527)
+.-...... .......-..+.+|-++-|+|||||.+++.- ..+ ...+...++.. ++. .+. ..-+-+...|..
T Consensus 98 d~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~-~~~~~~~l~~~-F~~v~~~kP~asR~~s~E~y 175 (191)
T 3dou_A 98 DAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM-TNDFIAIWRKN-FSSYKISKPPASRGSSSEIY 175 (191)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH-HHHHHHHHGGG-EEEEEEECC------CCEEE
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC-HHHHHHHHHHh-cCEEEEECCCCccCCCceEE
Confidence 642210000 0000000012356778889999999999753 222 23344444432 332 222 223334457899
Q ss_pred EEEEec
Q 009719 516 LVATKS 521 (527)
Q Consensus 516 Li~~K~ 521 (527)
+||++.
T Consensus 176 ~v~~~~ 181 (191)
T 3dou_A 176 IMFFGF 181 (191)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 998763
No 299
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.16 E-value=6.5e-05 Score=74.57 Aligned_cols=96 Identities=10% Similarity=-0.033 Sum_probs=61.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcccc-ccccccCCC-C---CCCCCccchhhhcCccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRGLI-GVYHDWCEP-F---STYPRTYDLIHVSGIESLI 448 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRGLi-G~~hdwce~-f---stYPrtyDLiHa~~~fs~~ 448 (527)
..|||+|||.|.++..|.++.- .|+-+|.. .-|..+-++--- .+-.+|.+. + ...+.+||+|-++.++.++
T Consensus 47 ~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~ 123 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLINRF 123 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGGGS
T ss_pred CEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhHhC
Confidence 5799999999999999976643 23333433 445544443210 122233221 1 1124689999999887765
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
. .=....+|-+|-|+| |||.++++-
T Consensus 124 ~-------~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 124 T-------TEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp C-------HHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred C-------HHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 3 123456899999999 999999983
No 300
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.16 E-value=9.6e-05 Score=69.21 Aligned_cols=129 Identities=15% Similarity=0.239 Sum_probs=69.0
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhh----hc-cccccccccCCC--CCCCCCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIY----DR-GLIGVYHDWCEP--FSTYPRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~----eR-GLiG~~hdwce~--fstYPrtyDLiHa~ 442 (527)
.+|||+|||.|.++.+|.+. .|..+-+.| ..+..+. ++ ++--+..|..+. +...+.+||+|-++
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~----~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSP----RVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCH----HHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCH----HHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 47999999999999888643 344333322 1111111 11 221122233331 12235689999875
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC---------HH-H-HHHHHHHHhcCCceeEE-ecCCCCCC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS---------PE-V-IDKVSRIANTVRWTAAV-HDKEPGSN 510 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~---------~~-~-~~~i~~i~~~l~W~~~~-~~~e~~~~ 510 (527)
.. .. + ....++-++-|+|+|||++++.-. .. + -++++++ ..- ++... .+.++..
T Consensus 151 ~~-~~--------~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~~~~~- 216 (227)
T 1g8a_A 151 VA-QP--------T--QAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNLEPYE- 216 (227)
T ss_dssp CC-ST--------T--HHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEECTTTS-
T ss_pred CC-CH--------h--HHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEeccCccc-
Confidence 33 10 1 113458899999999999998511 11 1 2456666 333 77543 3433222
Q ss_pred CCceEEEEEec
Q 009719 511 GREKILVATKS 521 (527)
Q Consensus 511 ~~ekiLi~~K~ 521 (527)
...-+++++|+
T Consensus 217 ~~~~~~~~~~~ 227 (227)
T 1g8a_A 217 KDHALFVVRKT 227 (227)
T ss_dssp SSEEEEEEECC
T ss_pred CCCEEEEEEeC
Confidence 23447777774
No 301
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.15 E-value=0.00036 Score=65.50 Aligned_cols=65 Identities=14% Similarity=0.217 Sum_probs=49.4
Q ss_pred cChHHHHHHHHHcC----------CCcEEeeccccCCCCCC-CcccEEEecCcccccccChHHHHHHHhhcccCCcEEEE
Q 009719 164 DSHKAQIQFALERG----------IPAFVAMLGTRRLPFPA-FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 164 D~seaqvq~A~eRg----------~pa~~~v~dae~LPFpD-~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lvi 232 (527)
|.++.+++.|+++. ..+.+..+|... ++++ ++||+|++...++|. +.++.++|||||++++
T Consensus 121 D~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~-------~~~~~~~LkpgG~lvi 192 (227)
T 1r18_A 121 EHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAPYNAIHVGAAAPDT-------PTELINQLASGGRLIV 192 (227)
T ss_dssp ESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCSEEEEEECSCBSSC-------CHHHHHTEEEEEEEEE
T ss_pred EcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCCccEEEECCchHHH-------HHHHHHHhcCCCEEEE
Confidence 66778888877541 135566777765 6765 899999999887664 3789999999999999
Q ss_pred ecCC
Q 009719 233 SGPP 236 (527)
Q Consensus 233 S~pp 236 (527)
+..+
T Consensus 193 ~~~~ 196 (227)
T 1r18_A 193 PVGP 196 (227)
T ss_dssp EESC
T ss_pred EEec
Confidence 8763
No 302
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.15 E-value=0.00045 Score=70.17 Aligned_cols=66 Identities=14% Similarity=0.094 Sum_probs=50.5
Q ss_pred HHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEecC
Q 009719 169 QIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 169 qvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|++.|+++ ++ .+.+..++.+.++++ ++||+|+|..++.|+.... ...+.++.|+|||||.++++..
T Consensus 84 ~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (348)
T 2y1w_A 84 MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIG 156 (348)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEE
T ss_pred HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecC
Confidence 55555543 54 356778888888887 6899999998888886543 3488899999999999997643
No 303
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.13 E-value=0.00011 Score=74.57 Aligned_cols=110 Identities=15% Similarity=0.114 Sum_probs=62.2
Q ss_pred HHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHh----hhccc---cccccccCCCCC
Q 009719 359 AYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVI----YDRGL---IGVYHDWCEPFS 430 (527)
Q Consensus 359 ~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi----~eRGL---iG~~hdwce~fs 430 (527)
..|.+.+...+....=..|||+|||.|.++..+.+.+. -|..|=.. ..+..+ -+.|+ |-+++.=.+.+
T Consensus 50 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s---~~~~~a~~~~~~~~~~~~i~~~~~d~~~~- 125 (340)
T 2fyt_A 50 ESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQS---EILYQAMDIIRLNKLEDTITLIKGKIEEV- 125 (340)
T ss_dssp HHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESS---THHHHHHHHHHHTTCTTTEEEEESCTTTS-
T ss_pred HHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChH---HHHHHHHHHHHHcCCCCcEEEEEeeHHHh-
Confidence 44555444332222234899999999999888866543 23333322 123322 22344 22222212223
Q ss_pred CCC-CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEE
Q 009719 431 TYP-RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVV 478 (527)
Q Consensus 431 tYP-rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~i 478 (527)
.+| ..||+|-+..+..... ..-.+..+|-++.|+|+|||.+|
T Consensus 126 ~~~~~~~D~Ivs~~~~~~l~------~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 126 HLPVEKVDVIISEWMGYFLL------FESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CCSCSCEEEEEECCCBTTBT------TTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCCCcEEEEEEcCchhhcc------CHHHHHHHHHHHHhhcCCCcEEE
Confidence 245 7899999875322111 11234568889999999999998
No 304
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=97.13 E-value=7.6e-05 Score=72.94 Aligned_cols=118 Identities=15% Similarity=0.075 Sum_probs=72.3
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc-cc-------------------cccccccCCCCCCCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR-GL-------------------IGVYHDWCEPFSTYP 433 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR-GL-------------------iG~~hdwce~fstYP 433 (527)
..|||+|||.|.++..|.+... +|+-+|-. .-+..+.++ ++ -+-..=.|.-+...|
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 4799999999999999988765 34444543 444444332 11 000111122222222
Q ss_pred ----CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC---------CH---HHHHHHHHHHhcCC
Q 009719 434 ----RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD---------SP---EVIDKVSRIANTVR 497 (527)
Q Consensus 434 ----rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird---------~~---~~~~~i~~i~~~l~ 497 (527)
.+||+|-+..+|.... ......++-||-|+|||||.+++-. .. -..+++++++.. .
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~-------~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~ 218 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAIN-------PGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-K 218 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSC-------GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-T
T ss_pred cccCCCEEEEEEhhhhhhCC-------HHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-C
Confidence 6899999887776542 2234568899999999999996421 00 124667777766 4
Q ss_pred ceeEEe
Q 009719 498 WTAAVH 503 (527)
Q Consensus 498 W~~~~~ 503 (527)
|++...
T Consensus 219 f~v~~~ 224 (252)
T 2gb4_A 219 CSMQCL 224 (252)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 877544
No 305
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.12 E-value=8.7e-05 Score=70.05 Aligned_cols=134 Identities=15% Similarity=0.153 Sum_probs=71.0
Q ss_pred eeEeecCCCccchhhhccCC--C-eeEEEecCCCC--CCchhHhhhc-cccccccccCCC--CCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--P-VWVMNVVPARK--SSTLSVIYDR-GLIGVYHDWCEP--FSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~-VwvMnvvp~~~--~ntl~vi~eR-GLiG~~hdwce~--fstYPrtyDLiHa~~~fs 446 (527)
..|||+|||.|.|+..|.+. + --|.-|=.... ...+..+-++ ++--+..|..+. ++..+.+||+|.++.. .
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~-~ 157 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA-Q 157 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC-C
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC-C
Confidence 47999999999999988654 2 22322211100 0112222222 222223333331 2222468999998532 1
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeCCHH----------HHHHHHHHHhcCCceeEE-ecCCCCCCCCceE
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPE----------VIDKVSRIANTVRWTAAV-HDKEPGSNGREKI 515 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~----------~~~~i~~i~~~l~W~~~~-~~~e~~~~~~eki 515 (527)
.. ....++.|+-|+|+|||.+++.-... ++.+-.++++..-++... .+.+..+ ...-+
T Consensus 158 ~~----------~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~-~~~~~ 226 (233)
T 2ipx_A 158 PD----------QTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYE-RDHAV 226 (233)
T ss_dssp TT----------HHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTS-SSEEE
T ss_pred cc----------HHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCcc-CCcEE
Confidence 10 11334667999999999999963221 122223556666777654 3444333 23456
Q ss_pred EEEEe
Q 009719 516 LVATK 520 (527)
Q Consensus 516 Li~~K 520 (527)
++++|
T Consensus 227 v~~~~ 231 (233)
T 2ipx_A 227 VVGVY 231 (233)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66665
No 306
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.12 E-value=0.00019 Score=67.59 Aligned_cols=67 Identities=12% Similarity=0.135 Sum_probs=50.4
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CCCC--CCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LPFP--AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LPFp--D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.+++.|+++ |.. +.+..+|+.. +|.. +++||+|++..... ....+|.++.|+|||||+++++.
T Consensus 85 D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~----~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 85 ERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDAAKG----QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp CCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGGS----CHHHHHHHHGGGEEEEEEEEEET
T ss_pred ECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECCCHH----HHHHHHHHHHHHcCCCeEEEEEc
Confidence 7778888888765 542 5666777655 3654 68999999876542 23349999999999999999975
No 307
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.10 E-value=0.00023 Score=69.74 Aligned_cols=68 Identities=13% Similarity=0.091 Sum_probs=48.2
Q ss_pred cChHHHHHHHHHcC--CC-cEEeecc---ccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALERG--IP-AFVAMLG---TRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eRg--~p-a~~~v~d---ae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.|++.|+++. .+ .....++ .+..|+.+++||+|++... | ++....++.|+.|+|||||+++++.
T Consensus 109 D~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~--~-~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 109 EFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVA--Q-PEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp ECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECCC--C-TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEecc--C-ChhHHHHHHHHHHhccCCCEEEEEE
Confidence 66778888887653 22 2333333 3567888999999997632 2 2334459999999999999999974
No 308
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.10 E-value=0.0004 Score=66.99 Aligned_cols=130 Identities=8% Similarity=0.161 Sum_probs=73.6
Q ss_pred eeeEeecCCCccchhhhccC-----CCeeEEEecCCCCCCchhHhhhcccc---cccc-ccCCCCCCC-----CCccchh
Q 009719 374 IRNIMDMNAFFGGFAAALTS-----DPVWVMNVVPARKSSTLSVIYDRGLI---GVYH-DWCEPFSTY-----PRTYDLI 439 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~-----~~VwvMnvvp~~~~ntl~vi~eRGLi---G~~h-dwce~fstY-----PrtyDLi 439 (527)
-++|||+|||.|.++.+|.. -.|..+-+-|.-....-+.+-..|+- -+.+ |-.+.++.. +.+||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 46899999999998887754 23444444443222222333333542 1111 222222222 4789999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH------------HHHHHHHHH----HhcCCceeEEe
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------------EVIDKVSRI----ANTVRWTAAVH 503 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~------------~~~~~i~~i----~~~l~W~~~~~ 503 (527)
.++.....+ ..++-++-|+|||||.+++.|-. .....++++ ...=++++.+.
T Consensus 141 ~~d~~~~~~------------~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 208 (242)
T 3r3h_A 141 FIDADKTNY------------LNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLL 208 (242)
T ss_dssp EEESCGGGH------------HHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred EEcCChHHh------------HHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEE
Confidence 876443322 34677888999999999997521 122233333 33445666655
Q ss_pred cCCCCCCCCceEEEEEec
Q 009719 504 DKEPGSNGREKILVATKS 521 (527)
Q Consensus 504 ~~e~~~~~~ekiLi~~K~ 521 (527)
.. .+.+++++|+
T Consensus 209 p~------~dG~~~~~k~ 220 (242)
T 3r3h_A 209 AI------ADGMFLVQPI 220 (242)
T ss_dssp SS------SSCEEEEEEC
T ss_pred Ec------cCceEEEEEc
Confidence 22 3578888875
No 309
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.09 E-value=7.8e-05 Score=72.17 Aligned_cols=43 Identities=12% Similarity=0.056 Sum_probs=33.0
Q ss_pred CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 434 RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 434 rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+||+|-++.++.... .+.=++..+|-||-|+|+|||++|+++
T Consensus 155 ~~fD~V~~~~~l~~i~-----~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 155 PLADCVLTLLAMECAC-----CSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp CCEEEEEEESCHHHHC-----SSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCEeeehHHHHHhc-----CCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 5899999998886431 011234578899999999999999995
No 310
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.09 E-value=0.00058 Score=63.83 Aligned_cols=68 Identities=9% Similarity=0.022 Sum_probs=46.2
Q ss_pred cChHHHHHHHHHcC---CCcEEeeccccCC---CCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALERG---IPAFVAMLGTRRL---PFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eRg---~pa~~~v~dae~L---PFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++.+++.++++. ..+.+..+|+... +..+++||+|++... ..+....++.++.|+|||||+++++.
T Consensus 105 D~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 105 EFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp ESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 66777777776542 2355667777652 222468999998654 22222335999999999999999974
No 311
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=97.09 E-value=7.5e-05 Score=74.82 Aligned_cols=100 Identities=9% Similarity=0.091 Sum_probs=59.8
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----ccc------c-cc-cccC------CCCC-CCC-
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLI------G-VY-HDWC------EPFS-TYP- 433 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLi------G-~~-hdwc------e~fs-tYP- 433 (527)
..|||+|||.|+.+..+...... +|+=+|-. .-|..+-+| |+- . .| ...+ +.+. .+|
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CeEEEEecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 57999999999977766544433 33444433 455555444 210 0 01 1111 2111 134
Q ss_pred CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 434 RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 434 rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
.+||+|-|..++-... +.-....+|-||-|+|||||++|+...
T Consensus 128 ~~FD~V~~~~~lhy~~------~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSF------HPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SCEEEEEEESCGGGTC------STTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhC------CHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 8999998876543211 001346899999999999999999863
No 312
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.09 E-value=7.8e-05 Score=71.15 Aligned_cols=71 Identities=11% Similarity=0.222 Sum_probs=44.8
Q ss_pred CcChHHHHHHHHHc----CCC--cEEeeccccCC---CCC---CCcccEEEecCcccccc--------------cChHHH
Q 009719 163 RDSHKAQIQFALER----GIP--AFVAMLGTRRL---PFP---AFSFDIVHCSRCLIPFT--------------AYNATY 216 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~p--a~~~v~dae~L---PFp---D~SFDlV~cs~~l~hw~--------------d~~~~a 216 (527)
.|.++.+++.|+++ ++. +.+..+|+..+ +++ +++||+|+|.--.++.. .+...+
T Consensus 95 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l 174 (254)
T 2h00_A 95 TEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVN 174 (254)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-----------------------
T ss_pred EECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHH
Confidence 37778888888764 443 56777787652 566 37999999985443332 011225
Q ss_pred HHHHhhcccCCcEEEEe
Q 009719 217 LIEVDRLLRPGGYLVIS 233 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS 233 (527)
+.++.|+|||||.+.+.
T Consensus 175 ~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 175 TGGITEIMAEGGELEFV 191 (254)
T ss_dssp --CTTTTHHHHTHHHHH
T ss_pred hhhHHHHEecCCEEEEE
Confidence 78999999999988764
No 313
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.08 E-value=0.001 Score=65.18 Aligned_cols=84 Identities=11% Similarity=0.127 Sum_probs=59.2
Q ss_pred hhccccccccCC--eeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSEN--ILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~--V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
+|.|+..|..+. ..+..+ |.++.+++.|+++ ++ ...+..+|+..+|. +++||+|++.... +.. .
T Consensus 130 ~G~~s~~la~~~~~~~V~~v---D~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~----~~~-~ 200 (272)
T 3a27_A 130 IGYFTIPLAKYSKPKLVYAI---EKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH----KTH-K 200 (272)
T ss_dssp TTTTHHHHHHHTCCSEEEEE---ECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS----SGG-G
T ss_pred CCHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc----cHH-H
Confidence 566666666542 122233 6677788777653 44 35677788887765 7899999987543 223 3
Q ss_pred HHHHHhhcccCCcEEEEecC
Q 009719 216 YLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p 235 (527)
++.++.|+|||||.++++..
T Consensus 201 ~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 201 FLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp GHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEEc
Confidence 89999999999999999875
No 314
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.07 E-value=3.2e-05 Score=72.99 Aligned_cols=97 Identities=14% Similarity=-0.020 Sum_probs=59.7
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhcc----ccccccccCCC-C-CCCC--CccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDRG----LIGVYHDWCEP-F-STYP--RTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eRG----LiG~~hdwce~-f-stYP--rtyDLiHa~~~f 445 (527)
..|||+|||.|.++..|.+..- +|+-+|.. ..+..+-++- +--+..|..+. + ..++ ..||+|.+..++
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~ 134 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGF 134 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSS
T ss_pred CeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchh
Confidence 4699999999999998865432 33333333 4444444432 11111222210 0 0011 238999998888
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.... .-....+|-|+-|+|+|||+++|.+
T Consensus 135 ~~~~-------~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 135 HHIP-------VEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp TTSC-------GGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hcCC-------HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 7552 2235689999999999999988875
No 315
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.05 E-value=0.00051 Score=67.26 Aligned_cols=97 Identities=12% Similarity=0.051 Sum_probs=62.1
Q ss_pred hhcccccccc--CC-eeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccCCCC----CCCcccEEEecC------
Q 009719 143 VASFGGSMLS--EN-ILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLPF----PAFSFDIVHCSR------ 204 (527)
Q Consensus 143 vgsfga~Ll~--r~-V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LPF----pD~SFDlV~cs~------ 204 (527)
.|.++.+|.. .+ ..++.+ |.++.+++.++++ |+ .+.+..+|+..++. ++++||+|++.-
T Consensus 94 ~G~~t~~la~~~~~~~~v~av---D~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g 170 (274)
T 3ajd_A 94 PGGKTTHLAQLMKNKGTIVAV---EISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNI 170 (274)
T ss_dssp TCHHHHHHHHHTTTCSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEECCC---
T ss_pred ccHHHHHHHHHcCCCCEEEEE---CCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEcCCCCCCc
Confidence 4555555554 23 222223 6677888777654 55 35677788877765 378999999751
Q ss_pred ccc-----------ccccChHHHHHHHhhcccCCcEEEEecCCCCCCCc
Q 009719 205 CLI-----------PFTAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQ 242 (527)
Q Consensus 205 ~l~-----------hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~~~~~~ 242 (527)
.+. +.......+|.++.|+|||||++++++.......+
T Consensus 171 ~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~en 219 (274)
T 3ajd_A 171 IKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEEN 219 (274)
T ss_dssp ---------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSS
T ss_pred ccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHh
Confidence 111 11133345899999999999999999875554433
No 316
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.05 E-value=7.6e-05 Score=74.29 Aligned_cols=84 Identities=14% Similarity=0.062 Sum_probs=55.2
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHcCC-------CcEEe--eccccCCCCCCCcccEEEecCcccccc--
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERGI-------PAFVA--MLGTRRLPFPAFSFDIVHCSRCLIPFT-- 210 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg~-------pa~~~--v~dae~LPFpD~SFDlV~cs~~l~hw~-- 210 (527)
.|.|+.+|..+ .|+++++++ +. ..|.++.. .+.+. ++|+..|| +++||+|+|..+ .+..
T Consensus 93 tG~~s~~la~~~~V~gVD~s~-m~-----~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~~-~~~~~~ 163 (276)
T 2wa2_A 93 RGSWSYYAASQPNVREVKAYT-LG-----TSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDIG-ESNPTA 163 (276)
T ss_dssp TCHHHHHHHTSTTEEEEEEEC-CC-----CTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECCC-CCCSCH
T ss_pred CCHHHHHHHHcCCEEEEECch-hh-----hhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECCC-cCCCch
Confidence 56666666654 577777776 31 11222221 34666 78888877 789999999866 2211
Q ss_pred --cChH--HHHHHHhhcccCCc--EEEEecC
Q 009719 211 --AYNA--TYLIEVDRLLRPGG--YLVISGP 235 (527)
Q Consensus 211 --d~~~--~aL~Ei~RVLRPGG--~lviS~p 235 (527)
+... .+|.++.|+||||| .|++..-
T Consensus 164 ~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 164 AVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred hhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 1111 27999999999999 9998653
No 317
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.04 E-value=0.00017 Score=71.35 Aligned_cols=139 Identities=15% Similarity=0.128 Sum_probs=68.9
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCC--CC-CchhH-hhhcccccc--ccccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPAR--KS-STLSV-IYDRGLIGV--YHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~--~~-ntl~v-i~eRGLiG~--~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
..|||+|||.|+|+..|.+. .|.-+-+-|.. +. +.+.. .+..++.-+ -.|-. .++ +.+||+|-|+..+..
T Consensus 76 ~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~-~l~--~~~fD~V~sd~~~~~ 152 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIH-TLP--VERTDVIMCDVGESS 152 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTT-TSC--CCCCSEEEECCCCCC
T ss_pred CEEEEeCcCCCHHHHHHHHcCcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHh-HCC--CCCCcEEEEeCcccC
Confidence 58999999999998887664 45555555531 00 10000 000011111 11222 132 589999998744210
Q ss_pred ccCCCCCCCCCcccccceeecccccCCc--EEEEeC----CHHHHHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEe
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEG--TVVVRD----SPEVIDKVSRIANTVRWTAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G--~~iird----~~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K 520 (527)
-. ...+.=....+|-++.|+|+||| .+++.. ..++++.++.+.+.+. .+.+...-.-....|..+||.+
T Consensus 153 ~~---~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~-~v~~~k~~sR~~s~E~y~v~~~ 227 (265)
T 2oxt_A 153 PK---WSVESERTIKILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWG-GGLVRNPYSRNSTHEMYFTSRA 227 (265)
T ss_dssp SC---HHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEESSC
T ss_pred Cc---cchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcC-CEEEEEecccCCCccEEEEecC
Confidence 00 00000000126778999999999 999863 3433344444433221 2223322222334677777643
No 318
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.04 E-value=4.8e-05 Score=75.03 Aligned_cols=46 Identities=22% Similarity=0.373 Sum_probs=33.1
Q ss_pred CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 433 PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 433 PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+.+||+|.|..++.... .....-.+..++-++-|+|||||++|+..
T Consensus 175 ~~~fD~I~~~~vl~~ih---l~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 175 TPEYDVVLCLSLTKWVH---LNWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp CCCEEEEEEESCHHHHH---HHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCcCEEEEChHHHHhh---hcCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 58999999988763220 00012245678999999999999999974
No 319
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.03 E-value=0.00014 Score=70.92 Aligned_cols=135 Identities=12% Similarity=0.149 Sum_probs=68.5
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhc-cccccccccCCCC--CCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDR-GLIGVYHDWCEPF--STYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eR-GLiG~~hdwce~f--stYPrtyDLiHa~~~fs 446 (527)
-.|||+|||.|++++.|.+. .|.-+-+-|.-...-+..+-+| .+.-+..|=.++. ...+..||+|.++-.+
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~- 156 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ- 156 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC-
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCC-
Confidence 57999999999999877542 2443333221000112223333 2333444433321 1124579998776322
Q ss_pred cccCCCCCCCCCcccccce-eecccccCCcEEEEeC----------CHHHHHHHHHHHhcCCceeE-EecCCCCCCCCce
Q 009719 447 LIKNPGSNKNSCSLVDLMV-EMDRMLRPEGTVVVRD----------SPEVIDKVSRIANTVRWTAA-VHDKEPGSNGREK 514 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~ill-EmDRILRP~G~~iird----------~~~~~~~i~~i~~~l~W~~~-~~~~e~~~~~~ek 514 (527)
.+...+|+ .+.|.|+|||.+++.- ..++...+.+.+++--.+.. ..+.|+... ..-
T Consensus 157 -----------~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~-~h~ 224 (232)
T 3id6_C 157 -----------PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDK-DHA 224 (232)
T ss_dssp -----------TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCS-SCE
T ss_pred -----------hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcC-ceE
Confidence 12234554 4567999999999861 11122233333333334332 234554432 356
Q ss_pred EEEEEecc
Q 009719 515 ILVATKSL 522 (527)
Q Consensus 515 iLi~~K~~ 522 (527)
+++++|++
T Consensus 225 ~v~~~~~~ 232 (232)
T 3id6_C 225 IVLSKYKG 232 (232)
T ss_dssp EEEEEEC-
T ss_pred EEEEEeCC
Confidence 77788763
No 320
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.03 E-value=0.00021 Score=66.56 Aligned_cols=68 Identities=21% Similarity=0.309 Sum_probs=48.2
Q ss_pred cChHHHHHHHHHc----CCC--cEEeecccc-CCCCC-C----CcccEEEecCcccccccChHHHHHHHhhcccCCcEEE
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTR-RLPFP-A----FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae-~LPFp-D----~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
|.++.+++.|+++ ++. +.+.++++. .+|.. + ++||+|++... ......++.++.|+|||||+|+
T Consensus 96 D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~----~~~~~~~l~~~~~~L~pgG~lv 171 (225)
T 3tr6_A 96 DVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDAD----KANTDLYYEESLKLLREGGLIA 171 (225)
T ss_dssp ESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEE
T ss_pred eCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECCC----HHHHHHHHHHHHHhcCCCcEEE
Confidence 6778888888765 543 566777763 34432 2 89999996543 2333348999999999999999
Q ss_pred EecC
Q 009719 232 ISGP 235 (527)
Q Consensus 232 iS~p 235 (527)
+...
T Consensus 172 ~~~~ 175 (225)
T 3tr6_A 172 VDNV 175 (225)
T ss_dssp EECS
T ss_pred EeCC
Confidence 9764
No 321
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.02 E-value=0.0013 Score=69.31 Aligned_cols=76 Identities=20% Similarity=0.198 Sum_probs=54.1
Q ss_pred CcChHHHHHHHHHc----CC-CcEEeeccccCCC--CCCCcccEEEe----c-C-cccccccC---------------hH
Q 009719 163 RDSHKAQIQFALER----GI-PAFVAMLGTRRLP--FPAFSFDIVHC----S-R-CLIPFTAY---------------NA 214 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~-pa~~~v~dae~LP--FpD~SFDlV~c----s-~-~l~hw~d~---------------~~ 214 (527)
.|.++.+++.++++ |+ .+.+.++|+..++ |++++||+|++ + . .+.+-++. ..
T Consensus 290 ~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~ 369 (450)
T 2yxl_A 290 FDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQR 369 (450)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHH
Confidence 37778888877655 66 3567778888887 77789999995 2 2 22222211 13
Q ss_pred HHHHHHhhcccCCcEEEEecCCCC
Q 009719 215 TYLIEVDRLLRPGGYLVISGPPVQ 238 (527)
Q Consensus 215 ~aL~Ei~RVLRPGG~lviS~pp~~ 238 (527)
.+|.++.++|||||+|++++....
T Consensus 370 ~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 370 ELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp HHHHHHHTTEEEEEEEEEEESCCC
T ss_pred HHHHHHHHhcCCCcEEEEEeCCCC
Confidence 489999999999999999987443
No 322
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.00 E-value=0.00014 Score=69.54 Aligned_cols=119 Identities=13% Similarity=0.142 Sum_probs=62.6
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhc------------cccc---cccccCCCCCC-CC-C
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDR------------GLIG---VYHDWCEPFST-YP-R 434 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eR------------GLiG---~~hdwce~fst-YP-r 434 (527)
..|||+|||.|+|+.+|... .. +|+-+|.. .-+..+-++ |+-. +..|..+.++. ++ .
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPED---LILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTTS---EEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CEEEEEcCCCCHHHHHHHHhCCCC---CEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 57999999999999888543 22 22222322 333333221 4411 12232222221 32 5
Q ss_pred ccchhhhcCccc-cccCCCCCCCCCcccccceeecccccCCcEEEEe-CCHHHHHHHHHHHhcCCc
Q 009719 435 TYDLIHVSGIES-LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANTVRW 498 (527)
Q Consensus 435 tyDLiHa~~~fs-~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~l~W 498 (527)
++|.|... |. .|......+.|-....+|-++-|+|+|||.+++. |..+..+.+.+.+....+
T Consensus 128 ~~d~v~~~--~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 128 QLSKMFFC--FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp CEEEEEEE--SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred ccCEEEEE--CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 77776532 22 1100000111222257899999999999999885 666666666655544433
No 323
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.00 E-value=0.00046 Score=67.81 Aligned_cols=42 Identities=21% Similarity=0.135 Sum_probs=34.8
Q ss_pred CCCcccEEEecCcccccccChHHHHHHHhhccc---C--CcEEEEecC
Q 009719 193 PAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLR---P--GGYLVISGP 235 (527)
Q Consensus 193 pD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLR---P--GG~lviS~p 235 (527)
++++||+|+++.+++|..+... ++.++.|+|| | ||.+++...
T Consensus 160 ~~~~fD~Ii~~dvl~~~~~~~~-ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 160 GLQRFQVVLLADLLSFHQAHDA-LLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp SCSSBSEEEEESCCSCGGGHHH-HHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred cCCCCCEEEEeCcccChHHHHH-HHHHHHHHhcccCCCCCCEEEEEEE
Confidence 4689999999999877655555 9999999999 9 998777544
No 324
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=97.00 E-value=0.00062 Score=65.08 Aligned_cols=98 Identities=15% Similarity=0.140 Sum_probs=58.3
Q ss_pred eeEeecCCCccchhhhccCC--C-eeEEEecCCCC----CCchhHhhhc----cc---cccc-cc-cC-CCCCCCCCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--P-VWVMNVVPARK----SSTLSVIYDR----GL---IGVY-HD-WC-EPFSTYPRTYD 437 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~-VwvMnvvp~~~----~ntl~vi~eR----GL---iG~~-hd-wc-e~fstYPrtyD 437 (527)
.+|||+|||.|.++..|.+. + .-|.-+=+... +..+..+-++ |+ +-+. .| .. +..+.-+.+||
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD 124 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFD 124 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCS
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEE
Confidence 58999999999999888654 2 44444444332 2355544333 33 2111 12 21 11111237999
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+|++..++.... + ...++-.+.++++|||++++.+
T Consensus 125 ~v~~~~~l~~~~------~---~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 125 RVVLAHSLWYFA------S---ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp EEEEESCGGGSS------C---HHHHHHHHHHHTTTCSEEEEEE
T ss_pred EEEEccchhhCC------C---HHHHHHHHHHHhCCCCEEEEEE
Confidence 999999887654 1 1344444566666799999964
No 325
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.99 E-value=0.00014 Score=73.80 Aligned_cols=129 Identities=10% Similarity=0.030 Sum_probs=72.4
Q ss_pred eeeEeecCCCccchhhhccC--CCeeEEEecCCCCC-CchhHhhhc----cccccccccCCCCCCCC-CccchhhhcCcc
Q 009719 374 IRNIMDMNAFFGGFAAALTS--DPVWVMNVVPARKS-STLSVIYDR----GLIGVYHDWCEPFSTYP-RTYDLIHVSGIE 445 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~--~~VwvMnvvp~~~~-ntl~vi~eR----GLiG~~hdwce~fstYP-rtyDLiHa~~~f 445 (527)
=..|||+|||.|+++|.+.. ...-| +-.|-. ..+..+-++ |+ .-..-.|.-...+| .+||+|......
T Consensus 123 g~rVLDIGcG~G~~ta~~lA~~~ga~V---~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~~ 198 (298)
T 3fpf_A 123 GERAVFIGGGPLPLTGILLSHVYGMRV---NVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGLEFDVLMVAALA 198 (298)
T ss_dssp TCEEEEECCCSSCHHHHHHHHTTCCEE---EEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGCCCSEEEECTTC
T ss_pred cCEEEEECCCccHHHHHHHHHccCCEE---EEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCCCcCEEEECCCc
Confidence 36899999999998866532 12222 222222 444444333 65 21111122222344 899999764331
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHH---HHH-H-HHHHhcCCceeEEecCCCCCCCCceEEEEEe
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEV---IDK-V-SRIANTVRWTAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~---~~~-i-~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K 520 (527)
. +...++-|+-|+|||||.+++++.... +.. + ....+ .|+....-+..+ ...+.|.+++|
T Consensus 199 ~------------d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~p~~-~v~N~vv~a~k 263 (298)
T 3fpf_A 199 E------------PKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVLPSG-KVNNTSVLVFK 263 (298)
T ss_dssp S------------CHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEECCCT-TCCCEEEEEEE
T ss_pred c------------CHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEECCCC-CcCcEEEEEEc
Confidence 1 235799999999999999999973221 000 0 11222 566655444333 23467888888
Q ss_pred c
Q 009719 521 S 521 (527)
Q Consensus 521 ~ 521 (527)
.
T Consensus 264 ~ 264 (298)
T 3fpf_A 264 C 264 (298)
T ss_dssp C
T ss_pred c
Confidence 4
No 326
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=96.98 E-value=0.00013 Score=70.37 Aligned_cols=88 Identities=13% Similarity=0.132 Sum_probs=63.3
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
+|.++-.+......+ .+...|+++.|+++|+++ |+...+.+.|.... .+.++||+|.....+||..+..+ ++.
T Consensus 60 ~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LHlL~~~~~-al~ 136 (200)
T 3fzg_A 60 FNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLPVLKQQDV-NIL 136 (200)
T ss_dssp THHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHHHHHHTTC-CHH
T ss_pred CCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHHHhhhhhHH-HHH
Confidence 566666666553233 555569999999999865 55534444554333 56799999999999988844344 788
Q ss_pred HHhhcccCCcEEEEe
Q 009719 219 EVDRLLRPGGYLVIS 233 (527)
Q Consensus 219 Ei~RVLRPGG~lviS 233 (527)
.+.+.|||||.||--
T Consensus 137 ~v~~~L~pggvfISf 151 (200)
T 3fzg_A 137 DFLQLFHTQNFVISF 151 (200)
T ss_dssp HHHHTCEEEEEEEEE
T ss_pred HHHHHhCCCCEEEEe
Confidence 999999999998753
No 327
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=96.98 E-value=8.8e-05 Score=73.32 Aligned_cols=84 Identities=10% Similarity=-0.011 Sum_probs=54.7
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHcCC-------CcEEe--eccccCCCCCCCcccEEEecCccccccc-
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERGI-------PAFVA--MLGTRRLPFPAFSFDIVHCSRCLIPFTA- 211 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg~-------pa~~~--v~dae~LPFpD~SFDlV~cs~~l~hw~d- 211 (527)
.|.|+.+|..+ .|+++++++ ... .|.++.. .+.+. ++|+..|| +++||+|+|..+ .+..+
T Consensus 85 tG~~s~~la~~~~V~gvD~s~-m~~-----~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~-~~~~~~ 155 (265)
T 2oxt_A 85 RGGWSYYAASRPHVMDVRAYT-LGV-----GGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG-ESSPKW 155 (265)
T ss_dssp TSHHHHHHHTSTTEEEEEEEC-CCC-----SSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC-CCCSCH
T ss_pred CCHHHHHHHHcCcEEEEECch-hhh-----hhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc-ccCCcc
Confidence 56666666654 577787776 211 1211211 34566 78888776 789999999865 22211
Q ss_pred ---ChH--HHHHHHhhcccCCc--EEEEecC
Q 009719 212 ---YNA--TYLIEVDRLLRPGG--YLVISGP 235 (527)
Q Consensus 212 ---~~~--~aL~Ei~RVLRPGG--~lviS~p 235 (527)
... .+|.++.|+||||| .|++..-
T Consensus 156 ~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 156 SVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred chhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 111 27999999999999 9999663
No 328
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.96 E-value=0.00011 Score=79.77 Aligned_cols=89 Identities=11% Similarity=0.036 Sum_probs=68.0
Q ss_pred hhccccc----cccCCeeEEeeccCcChHHHHHHHHHc----C-CCcEEeeccccCC--CCCCCcccEEEecCccccccc
Q 009719 143 VASFGGS----MLSENILTLSFAPRDSHKAQIQFALER----G-IPAFVAMLGTRRL--PFPAFSFDIVHCSRCLIPFTA 211 (527)
Q Consensus 143 vgsfga~----Ll~r~V~~msiAp~D~seaqvq~A~eR----g-~pa~~~v~dae~L--PFpD~SFDlV~cs~~l~hw~d 211 (527)
+|+.||. |..+|..+..| |.++.+|+.|+.+ | +.+.+.+++++.| ++++++||+|+|..+++|.++
T Consensus 73 vGCG~G~~~~~la~~ga~V~gi---D~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 73 LGCAQGFFSLSLASKGATIVGI---DFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp ETCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHHHHHH
T ss_pred ECCCCcHHHHHHHhCCCEEEEE---CCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchhcCCC
Confidence 6666654 45667765555 8889999988753 4 4567888899988 788999999999999999987
Q ss_pred ChH-HHHHHHhhcccCCcEEEEec
Q 009719 212 YNA-TYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 212 ~~~-~aL~Ei~RVLRPGG~lviS~ 234 (527)
... ..+..+.+.|+++|..++.+
T Consensus 150 ~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 150 LHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp HHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred HHHHHHHHHHHHHhccccceeeEE
Confidence 653 35667888899988777644
No 329
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.96 E-value=0.00038 Score=64.76 Aligned_cols=68 Identities=16% Similarity=0.136 Sum_probs=47.7
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CC-CC---CCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEE
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LP-FP---AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LP-Fp---D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lvi 232 (527)
|.++.+++.|+++ |+. +.+.++|+.. +| ++ .++||+|++..... ....+|.++.|+|||||++++
T Consensus 90 D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~~~----~~~~~l~~~~~~L~pgG~lv~ 165 (223)
T 3duw_A 90 EASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIFIDADKQ----NNPAYFEWALKLSRPGTVIIG 165 (223)
T ss_dssp ESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSCGG----GHHHHHHHHHHTCCTTCEEEE
T ss_pred ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCCcH----HHHHHHHHHHHhcCCCcEEEE
Confidence 6778888888754 553 5667777643 22 22 26799999875422 223499999999999999998
Q ss_pred ecC
Q 009719 233 SGP 235 (527)
Q Consensus 233 S~p 235 (527)
...
T Consensus 166 ~~~ 168 (223)
T 3duw_A 166 DNV 168 (223)
T ss_dssp ESC
T ss_pred eCC
Confidence 765
No 330
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=96.96 E-value=0.00032 Score=65.96 Aligned_cols=122 Identities=9% Similarity=0.122 Sum_probs=69.1
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh----ccc--ccc-ccccCCCCCC-C-CCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD----RGL--IGV-YHDWCEPFST-Y-PRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e----RGL--iG~-~hdwce~fst-Y-PrtyDLiHa~~ 443 (527)
..|||+|||.|.|+.+|... |-+ +|+-+|-. .-+..+-+ .|+ +-+ ..|..+ ++. + +.+||.|++.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~~--~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~- 115 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPDI--NYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLN- 115 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTS--EEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEE-
T ss_pred ceEEEEecCCCHHHHHHHHHCCCC--CEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEE-
Confidence 46999999999999988543 211 33334433 44444333 354 211 223222 221 3 3789988763
Q ss_pred ccc-cccCCCCCCCCCcccccceeecccccCCcEEEEe-CCHHHHHHHHHHHhcCCceeE
Q 009719 444 IES-LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 444 ~fs-~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~l~W~~~ 501 (527)
|+ .|.....++.+-....+|-|+-|+|+|||.+++. |..+..+.+.+.+....|+..
T Consensus 116 -~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 116 -FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp -SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred -CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 22 1210000112222467899999999999999987 566666666666555556543
No 331
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=96.93 E-value=0.00014 Score=68.00 Aligned_cols=89 Identities=11% Similarity=0.156 Sum_probs=55.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc-----cccccccccCCCCCCCCCccchhhhcCccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR-----GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLI 448 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR-----GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~ 448 (527)
.+|||+|||.|.++..|.+... +|+-++.. ..+..+-++ .+--+..|..+.++ -+.+||+|.+...+...
T Consensus 72 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 72 QKVLEIGTGIGYYTALIAEIVD---KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAPTL 147 (231)
T ss_dssp CEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHcC---EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHHHH
Confidence 4899999999999999876542 23333322 444444443 12112223333222 13689999998766533
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
.-|+-|+|+|||.+++...
T Consensus 148 ---------------~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 148 ---------------LCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp ---------------CHHHHHTEEEEEEEEEEEC
T ss_pred ---------------HHHHHHHcCCCcEEEEEEc
Confidence 2378899999999999853
No 332
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=96.92 E-value=0.00014 Score=69.34 Aligned_cols=122 Identities=12% Similarity=0.148 Sum_probs=65.9
Q ss_pred eeeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhH----hhhccccc--c-ccccCCCCCC-C-CCccchhhh
Q 009719 374 IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSV----IYDRGLIG--V-YHDWCEPFST-Y-PRTYDLIHV 441 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~v----i~eRGLiG--~-~hdwce~fst-Y-PrtyDLiHa 441 (527)
-..|||+|||.|.++.+|... ..-|.-| |.. ..+.. +-+.|+-. + ..|-.+.++. + +.+||+|++
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~gi---D~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGI---EVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEE---EecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEE
Confidence 357999999999999888532 3333333 322 33333 23345421 1 1221221111 2 479999987
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEe-CCHHHHHHHHHHHhcC-Cce
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANTV-RWT 499 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~l-~W~ 499 (527)
... ..|......+.|-.-..++-|+-|+|+|||.+++. |.....+.+.+++... .|+
T Consensus 112 ~~~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~ 170 (218)
T 3dxy_A 112 FFP-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYK 170 (218)
T ss_dssp ESC-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEE
T ss_pred eCC-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCcc
Confidence 421 22210000001111125888999999999999887 4555666666665432 344
No 333
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=96.92 E-value=3.2e-05 Score=69.39 Aligned_cols=96 Identities=17% Similarity=0.172 Sum_probs=56.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----cccc----ccccccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGLI----GVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGLi----G~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|||+|||.|.++.+|...+.. +|+-+|-. ..+..+-+ .|+- =+..|+.+.++..+..||+|-++..|
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSRGMS--AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCC--EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS
T ss_pred CeEEEeCCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC
Confidence 47999999999999888766532 23333332 33333322 2331 11223333223345679999987665
Q ss_pred ccccCCCCCCCCCcccccceeec--ccccCCcEEEEeCC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMD--RMLRPEGTVVVRDS 482 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmD--RILRP~G~~iird~ 482 (527)
..- ....++-++- |+|+|||.+++...
T Consensus 111 ~~~----------~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 111 AKE----------TIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp HHH----------HHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred Ccc----------hHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 311 1234455554 99999999999853
No 334
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=96.89 E-value=0.0022 Score=65.84 Aligned_cols=90 Identities=11% Similarity=0.017 Sum_probs=58.8
Q ss_pred cCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCccccc-------ccChHHHHHHHhhcccCCc
Q 009719 162 PRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPF-------TAYNATYLIEVDRLLRPGG 228 (527)
Q Consensus 162 p~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw-------~d~~~~aL~Ei~RVLRPGG 228 (527)
..|.++.+++.|+++ |+ .+.+.++|+..+|+++++||+|+|.--.... .+.-..++.++.|+| +|+
T Consensus 246 g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~ 324 (373)
T 3tm4_A 246 GIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKR 324 (373)
T ss_dssp EEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEE
T ss_pred EEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCe
Confidence 337788888888764 55 4678889999999999999999996332111 111134889999999 444
Q ss_pred EEEEecCCCCCCCchhHHHHHHHHHHhcceEEee
Q 009719 229 YLVISGPPVQWPKQDKEWADLQAVARALCYELIA 262 (527)
Q Consensus 229 ~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~ 262 (527)
.++++.. .+.+++..+.+.|+...
T Consensus 325 ~~~i~~~----------~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 325 GVFITTE----------KKAIEEAIAENGFEIIH 348 (373)
T ss_dssp EEEEESC----------HHHHHHHHHHTTEEEEE
T ss_pred EEEEECC----------HHHHHHHHHHcCCEEEE
Confidence 4444432 23455566666777653
No 335
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=96.87 E-value=0.00051 Score=69.22 Aligned_cols=100 Identities=13% Similarity=0.099 Sum_probs=53.0
Q ss_pred eeEeecCCCccchhhhccCC-CeeEEEecCCCCCCchhHh--hhccc--cccccccCCCCCCCCCccchhhhcCccc--c
Q 009719 375 RNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKSSTLSVI--YDRGL--IGVYHDWCEPFSTYPRTYDLIHVSGIES--L 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~ntl~vi--~eRGL--iG~~hdwce~fstYPrtyDLiHa~~~fs--~ 447 (527)
..|||+|||.|+|+..|.+. .|.-+-+-...++..+..+ -..|. +-+... ...+..-+.+||+|.|+..++ .
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~D~~~l~~~~fD~V~sd~~~~~g~ 162 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSG-VDVFFIPPERCDTLLCDIGESSPN 162 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECS-CCTTTSCCCCCSEEEECCCCCCSS
T ss_pred CEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEec-cccccCCcCCCCEEEECCccccCc
Confidence 58999999999999888776 3443333111111111000 00111 111111 012211147899999986654 1
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
+. .+.-....+|-++-|+|+|||.+++.
T Consensus 163 ~~-----~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 163 PT-----VEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp HH-----HHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ch-----hhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 10 00000013678899999999999996
No 336
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=96.87 E-value=4.2e-05 Score=72.20 Aligned_cols=93 Identities=14% Similarity=0.159 Sum_probs=58.3
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc---cccc-cccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL---IGVY-HDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL---iG~~-hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|||+|||.|+++.+|.+... .|+-+|-. ..+..+-+ .|+ +-+. .|..+ ++ -+.+||+|.++..|
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTGM---RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLL-LA-SFLKADVVFLSPPW 154 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH-HG-GGCCCSEEEECCCC
T ss_pred CEEEECccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHH-hc-ccCCCCEEEECCCc
Confidence 4799999999999999977653 33333322 33333322 233 1111 22222 11 23789999998777
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.... .....+.|+-|+|+|||.+|+..
T Consensus 155 ~~~~---------~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 155 GGPD---------YATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SSGG---------GGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CCcc---------hhhhHHHHHHhhcCCcceeHHHH
Confidence 6543 12337789999999999988764
No 337
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.83 E-value=0.00057 Score=73.10 Aligned_cols=69 Identities=13% Similarity=0.120 Sum_probs=52.0
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccCh-HHHHHHHhhcccCCcEEEEec
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-ATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-~~aL~Ei~RVLRPGG~lviS~ 234 (527)
|.++ |++.|+++ |+. +.+..+|.+.++++ ++||+|+|...+.|+.... ...+.++.|+|||||+++++.
T Consensus 188 D~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 188 EAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp ECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 5666 77777653 553 56778888888887 5899999987777775432 347889999999999999643
No 338
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=96.83 E-value=0.00084 Score=63.41 Aligned_cols=106 Identities=12% Similarity=0.118 Sum_probs=64.2
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc-----cc--c-ccccccCCCCCCCC-Cccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR-----GL--I-GVYHDWCEPFSTYP-RTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR-----GL--i-G~~hdwce~fstYP-rtyDLiHa 441 (527)
.+|||+|||.|.++.+|... ..-|.. .|.. ..+..+-++ |. + =...|..+. .+| .+||+|-+
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~---~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~~~D~v~~ 172 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVGEKGLVES---YEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--ELEEAAYDGVAL 172 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEE---EESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--CCCTTCEEEEEE
T ss_pred CEEEEECCCcCHHHHHHHHHhCCCCEEEE---EeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--CCCCCCcCEEEE
Confidence 48999999999999888654 222222 2222 444444433 42 1 112243332 134 68999876
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH-HHHHHHHHHHhcCCce
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP-EVIDKVSRIANTVRWT 499 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~-~~~~~i~~i~~~l~W~ 499 (527)
+ .. ....+|-++-|+|+|||.+++-... +.+.++.+.++...|.
T Consensus 173 ~-----~~---------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 173 D-----LM---------EPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp E-----SS---------CGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred C-----Cc---------CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 3 11 1246899999999999999988653 3555555555555444
No 339
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=96.82 E-value=0.00078 Score=67.69 Aligned_cols=88 Identities=16% Similarity=0.147 Sum_probs=58.3
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHcC----------CCcEEeeccccC-CCCCCCcccEEEecCccccc--
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERG----------IPAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPF-- 209 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg----------~pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw-- 209 (527)
|.++.+++.+ +.. .+...|.++.+++.|+++- ..+.+..+|+.. ++..+++||+|++.... |+
T Consensus 89 G~~~~~l~~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~-~~~~ 165 (314)
T 1uir_A 89 GATLREVLKHPTVE--KAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTD-PVGE 165 (314)
T ss_dssp SHHHHHHTTSTTCC--EEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCC-CBST
T ss_pred CHHHHHHHhcCCCC--EEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEECCCC-cccc
Confidence 4444455554 121 2333366788888887642 124567778655 66678999999998553 55
Q ss_pred -ccC----hHHHHHHHhhcccCCcEEEEec
Q 009719 210 -TAY----NATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 210 -~d~----~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
... ...++.++.|+|||||.|++..
T Consensus 166 ~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 166 DNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp TCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 211 1348999999999999999864
No 340
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.81 E-value=0.00044 Score=65.60 Aligned_cols=67 Identities=22% Similarity=0.354 Sum_probs=48.0
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CC--------------CCC--CcccEEEecCcccccccChHHHHHHH
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LP--------------FPA--FSFDIVHCSRCLIPFTAYNATYLIEV 220 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LP--------------FpD--~SFDlV~cs~~l~hw~d~~~~aL~Ei 220 (527)
|.++.+++.|+++ |.. +.+..+|+.. +| |++ ++||+|++.....++ ..+|.++
T Consensus 92 D~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~----~~~l~~~ 167 (239)
T 2hnk_A 92 DVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENY----PNYYPLI 167 (239)
T ss_dssp ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGH----HHHHHHH
T ss_pred ECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHH----HHHHHHH
Confidence 6677888888765 443 4556666433 23 555 899999988654332 2489999
Q ss_pred hhcccCCcEEEEec
Q 009719 221 DRLLRPGGYLVISG 234 (527)
Q Consensus 221 ~RVLRPGG~lviS~ 234 (527)
.++|||||++++..
T Consensus 168 ~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 168 LKLLKPGGLLIADN 181 (239)
T ss_dssp HHHEEEEEEEEEEC
T ss_pred HHHcCCCeEEEEEc
Confidence 99999999999975
No 341
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=96.81 E-value=9.7e-05 Score=78.26 Aligned_cols=124 Identities=10% Similarity=0.188 Sum_probs=74.6
Q ss_pred HHHHHHHhhhccCCCCeeeEeecCCC------ccchhhhccCC-----CeeEEEecCCCCCCchhHhhhccccccccccC
Q 009719 358 VAYYKNTLNVKLGTPAIRNIMDMNAF------FGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWC 426 (527)
Q Consensus 358 v~~Y~~~l~~~i~~~~iRnvmDm~ag------~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwc 426 (527)
...|.+.|.+.... -.+|||+||| +||.+..|..+ .|.-+-+-|.- . .....+-=+..|-
T Consensus 203 ~~~Ye~lL~~l~~~--~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m----~--~~~~rI~fv~GDa- 273 (419)
T 3sso_A 203 TPHYDRHFRDYRNQ--QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS----H--VDELRIRTIQGDQ- 273 (419)
T ss_dssp HHHHHHHHGGGTTS--CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG----G--GCBTTEEEEECCT-
T ss_pred HHHHHHHHHhhcCC--CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH----h--hcCCCcEEEEecc-
Confidence 45677766644332 3789999999 78876666432 24444443331 0 1111111111121
Q ss_pred CCCCCC------CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC------------------
Q 009719 427 EPFSTY------PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS------------------ 482 (527)
Q Consensus 427 e~fstY------PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~------------------ 482 (527)
+.+++- ..+||+|.++.. ++. ......|-|+=|+|||||++|+.|-
T Consensus 274 ~dlpf~~~l~~~d~sFDlVisdgs--H~~--------~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~ 343 (419)
T 3sso_A 274 NDAEFLDRIARRYGPFDIVIDDGS--HIN--------AHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECS 343 (419)
T ss_dssp TCHHHHHHHHHHHCCEEEEEECSC--CCH--------HHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCT
T ss_pred cccchhhhhhcccCCccEEEECCc--ccc--------hhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcch
Confidence 111111 378999998643 221 1245688999999999999999752
Q ss_pred HHHHHHHHHHHhcCCcee
Q 009719 483 PEVIDKVSRIANTVRWTA 500 (527)
Q Consensus 483 ~~~~~~i~~i~~~l~W~~ 500 (527)
..+++.++++...+.|.-
T Consensus 344 ~tii~~lk~l~D~l~~~~ 361 (419)
T 3sso_A 344 GTSLGLLKSLIDAIQHQE 361 (419)
T ss_dssp TSHHHHHHHHHHHHTGGG
T ss_pred hHHHHHHHHHHHHhcccc
Confidence 346888999999988864
No 342
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=96.81 E-value=0.00054 Score=69.98 Aligned_cols=95 Identities=17% Similarity=0.209 Sum_probs=61.1
Q ss_pred CCCeeeEeecCCCccchhhhccCC--C--eeEEEecCCCCCCchhHhhhc-cccccccccCCCCCCCCCccchhhhcCcc
Q 009719 371 TPAIRNIMDMNAFFGGFAAALTSD--P--VWVMNVVPARKSSTLSVIYDR-GLIGVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 371 ~~~iRnvmDm~ag~GgFaAaL~~~--~--VwvMnvvp~~~~ntl~vi~eR-GLiG~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
....+.|+|+|||.|.++.+|.+. . +.+.-+ |. .+..+-++ ++-=+-+|.-++ +|.. |+|.+..++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~----~~~~a~~~~~v~~~~~d~~~~---~p~~-D~v~~~~vl 271 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PH----VIQDAPAFSGVEHLGGDMFDG---VPKG-DAIFIKWIC 271 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HH----HHTTCCCCTTEEEEECCTTTC---CCCC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HH----HHHhhhhcCCCEEEecCCCCC---CCCC-CEEEEechh
Confidence 456789999999999999998542 2 333333 21 11111111 222223444343 4555 999999999
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
-.|. + =....+|-++=|.|+|||.++|.|
T Consensus 272 h~~~------~-~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 272 HDWS------D-EHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp GGBC------H-HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcCC------H-HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 8775 1 123468999999999999999965
No 343
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=96.79 E-value=0.00021 Score=65.78 Aligned_cols=90 Identities=16% Similarity=0.115 Sum_probs=55.5
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc--ccc-ccccCCCCCCCCCccchhhhcCcc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL--IGV-YHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL--iG~-~hdwce~fstYPrtyDLiHa~~~f 445 (527)
-.+|||+|||.|.+++.|.+...-| .-.|-. ..+..+-++ |+ +-+ ..|..+.+. -..+||+|.++..+
T Consensus 78 ~~~vLdiG~G~G~~~~~la~~~~~v---~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 78 QSRVLEIGTGSGYQTAILAHLVQHV---CSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ-ARAPFDAIIVTAAP 153 (210)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSSEE---EEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEESSBC
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCEE---EEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-cCCCccEEEEccch
Confidence 3589999999999999987663322 222322 344444333 33 111 223333221 13689999998766
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
.... =++-|+|+|||.+++.-.
T Consensus 154 ~~~~---------------~~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 154 PEIP---------------TALMTQLDEGGILVLPVG 175 (210)
T ss_dssp SSCC---------------THHHHTEEEEEEEEEEEC
T ss_pred hhhh---------------HHHHHhcccCcEEEEEEc
Confidence 5442 157899999999999743
No 344
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.78 E-value=0.00068 Score=66.12 Aligned_cols=76 Identities=13% Similarity=0.139 Sum_probs=45.7
Q ss_pred eeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCC---CCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEE
Q 009719 155 ILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLP---FPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 155 V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LP---FpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
|.++++++... +.+++.|.++ ..+.+..+|+..++ ...++||+|++.... ++....++..+.|+|||||+|+
T Consensus 104 V~avD~s~~~l-~~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lv 178 (232)
T 3id6_C 104 AYGVEFSPRVV-RELLLVAQRR-PNIFPLLADARFPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDML 178 (232)
T ss_dssp EEEEECCHHHH-HHHHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEECcHHHH-HHHHHHhhhc-CCeEEEEcccccchhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEE
Confidence 55555433211 1234556555 34556677876542 225799999988543 3333334456667999999999
Q ss_pred EecC
Q 009719 232 ISGP 235 (527)
Q Consensus 232 iS~p 235 (527)
++..
T Consensus 179 isik 182 (232)
T 3id6_C 179 LVIK 182 (232)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9854
No 345
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=96.78 E-value=0.00043 Score=66.72 Aligned_cols=123 Identities=15% Similarity=0.156 Sum_probs=66.1
Q ss_pred eeeEeecCCCccchhhhccCC-C-eeEEEecCCCCC-CchhHhhh----------ccc--ccc-ccccCCCCCC-C-CCc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-P-VWVMNVVPARKS-STLSVIYD----------RGL--IGV-YHDWCEPFST-Y-PRT 435 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~-VwvMnvvp~~~~-ntl~vi~e----------RGL--iG~-~hdwce~fst-Y-Prt 435 (527)
-..|||+|||.|.|+.+|... | .-|.-| |-. ..+..+-+ .|+ |-+ ..|.-+.++. + +.+
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~Gi---Dis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGL---EIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEE---ESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEE---ECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 357999999999999998654 2 222222 222 22222211 232 111 2222222221 2 478
Q ss_pred cchhhhcCccc-cccCCCCCCCCCcccccceeecccccCCcEEEEe-CCHHHHHHHHHHHhcCC-ceeE
Q 009719 436 YDLIHVSGIES-LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANTVR-WTAA 501 (527)
Q Consensus 436 yDLiHa~~~fs-~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~l~-W~~~ 501 (527)
||+|... |. .|......+.|.....+|-|+-|+|+|||.+++. |..+..+.+.+.+...- |+..
T Consensus 124 ~D~v~~~--~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 124 LTKMFFL--FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp EEEEEEE--SCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEEE
T ss_pred eeEEEEe--CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccc
Confidence 9998653 22 2210001233444467999999999999999886 66666676666655443 5543
No 346
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.75 E-value=0.00028 Score=66.88 Aligned_cols=125 Identities=14% Similarity=0.227 Sum_probs=71.9
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhc----cccc---cc-c----------------cc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDR----GLIG---VY-H----------------DW 425 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eR----GLiG---~~-h----------------dw 425 (527)
.+|||+|||.|.++..|... .|..+-+-| ..+..+-++ |+-. +. . .|
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~----~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSE----EWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCH----HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCH----HHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 48999999999999888543 233332221 222222222 3311 10 0 12
Q ss_pred CCCCCCCC-CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC------------HHHHHH----
Q 009719 426 CEPFSTYP-RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS------------PEVIDK---- 488 (527)
Q Consensus 426 ce~fstYP-rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~------------~~~~~~---- 488 (527)
-..|++ + .+||+|.++.... ....++-++-|+|||||.+++.+- ......
T Consensus 138 ~~~f~~-~~~~fD~I~~~~~~~------------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~ 204 (239)
T 2hnk_A 138 ASDFAF-GPSSIDLFFLDADKE------------NYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKF 204 (239)
T ss_dssp GTTTCC-STTCEEEEEECSCGG------------GHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHH
T ss_pred cccccC-CCCCcCEEEEeCCHH------------HHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHH
Confidence 222321 2 6799998763322 224677888999999999999861 112222
Q ss_pred HHHHHhcCCceeEEecCCCCCCCCceEEEEEecc
Q 009719 489 VSRIANTVRWTAAVHDKEPGSNGREKILVATKSL 522 (527)
Q Consensus 489 i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~~ 522 (527)
.+.+...-++++..... .+.+.+++|++
T Consensus 205 ~~~~~~~~~~~~~~~p~------~~g~~~~~~~~ 232 (239)
T 2hnk_A 205 NELVYNDSLVDVSLVPI------ADGVSLVRKRL 232 (239)
T ss_dssp HHHHHHCTTEEEEEECS------TTCEEEEEECC
T ss_pred HHHHhhCCCeEEEEEEc------CCceEeeeehh
Confidence 33345556677776533 24588899875
No 347
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.75 E-value=0.00018 Score=68.54 Aligned_cols=125 Identities=14% Similarity=0.197 Sum_probs=70.4
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhh----ccccc---cc-cccCCCCCCCC-----Ccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYD----RGLIG---VY-HDWCEPFSTYP-----RTY 436 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~e----RGLiG---~~-hdwce~fstYP-----rty 436 (527)
++|||+|||.|.++.+|... .|..+-+-| ..+.++-+ .|+-. +. .|..+.++..| .+|
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~----~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIACDQDP----NATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEF 149 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCH----HHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCH----HHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 58999999999998888653 233332211 33333322 24311 11 12111112221 679
Q ss_pred chhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC------------HHHHHHHHHH----HhcCCcee
Q 009719 437 DLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS------------PEVIDKVSRI----ANTVRWTA 500 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~------------~~~~~~i~~i----~~~l~W~~ 500 (527)
|+|.++.... ....++-++-|+|||||.+++.+. ......++++ ...-+++.
T Consensus 150 D~V~~d~~~~------------~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 217 (232)
T 3cbg_A 150 DLIFIDADKR------------NYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRI 217 (232)
T ss_dssp EEEEECSCGG------------GHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEE
T ss_pred CEEEECCCHH------------HHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEE
Confidence 9998753322 234577888899999999999742 1122333333 44456776
Q ss_pred EEecCCCCCCCCceEEEEEec
Q 009719 501 AVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 501 ~~~~~e~~~~~~ekiLi~~K~ 521 (527)
..... .+.+.+++|+
T Consensus 218 ~~lp~------~dG~~~~~~~ 232 (232)
T 3cbg_A 218 SVIPL------GDGMTLALKK 232 (232)
T ss_dssp EEECS------BTCEEEEEEC
T ss_pred EEEEc------CCeEEEEEeC
Confidence 66532 3568888884
No 348
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=96.74 E-value=0.0016 Score=69.62 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=54.2
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCCC-CCCcccEEEe----cC--ccc-------ccccC--------hHHH
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLPF-PAFSFDIVHC----SR--CLI-------PFTAY--------NATY 216 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LPF-pD~SFDlV~c----s~--~l~-------hw~d~--------~~~a 216 (527)
|.++.+++.++++ |+. +.+.++|+..++. .+++||.|+| +. .+. +|... ...+
T Consensus 149 Dis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~i 228 (479)
T 2frx_A 149 EFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQREL 228 (479)
T ss_dssp CSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHH
Confidence 7788888877654 664 5677788888875 6789999996 21 111 22211 2248
Q ss_pred HHHHhhcccCCcEEEEecCCCCCC
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWP 240 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~ 240 (527)
|.++.|+|||||+|++|+-.....
T Consensus 229 L~~a~~~LkpGG~LvysTcs~~~~ 252 (479)
T 2frx_A 229 IDSAFHALRPGGTLVYSTCTLNQE 252 (479)
T ss_dssp HHHHHHHEEEEEEEEEEESCCSST
T ss_pred HHHHHHhcCCCCEEEEecccCCcc
Confidence 999999999999999998755443
No 349
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.74 E-value=0.00077 Score=65.49 Aligned_cols=125 Identities=11% Similarity=0.110 Sum_probs=68.4
Q ss_pred CeeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh-------ccc---cccc-cccCCCCC-----CC-C
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD-------RGL---IGVY-HDWCEPFS-----TY-P 433 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e-------RGL---iG~~-hdwce~fs-----tY-P 433 (527)
.-.+|||+|||.|.++..|..+ |- .+|+-++-. ..+..+-+ .|+ +-++ .|..+..+ .+ +
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEK--AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTT--EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 3458999999999998877543 11 122222221 22222211 233 2222 23222211 12 4
Q ss_pred CccchhhhcCcccccc---CC------CCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCcee
Q 009719 434 RTYDLIHVSGIESLIK---NP------GSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTA 500 (527)
Q Consensus 434 rtyDLiHa~~~fs~~~---~~------~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~ 500 (527)
.+||+|-++--|.... .+ ......+.+..++-++-|+|+|||.+++--..+.+.++.+.++.- |..
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 7899999974443210 00 001134567888999999999999998876666666777776663 653
No 350
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=96.73 E-value=0.0019 Score=63.71 Aligned_cols=89 Identities=10% Similarity=0.116 Sum_probs=58.8
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHcC------C---CcEEeeccccC-CCCCCCcccEEEecCcccccccC
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERG------I---PAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg------~---pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
|..+.+++.+ ++. .+...|.++.+++.|++.- . .+.+..+|+.. |+..+++||+|++.... |+...
T Consensus 87 G~~~~~l~~~~~~~--~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~-~~~~~ 163 (275)
T 1iy9_A 87 GGVIREILKHPSVK--KATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTE-PVGPA 163 (275)
T ss_dssp CHHHHHHTTCTTCS--EEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSS-CCSCC
T ss_pred HHHHHHHHhCCCCc--eEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECCCC-CCCcc
Confidence 4444455555 332 2333366788999988642 2 24566777654 56667899999997543 43221
Q ss_pred ----hHHHHHHHhhcccCCcEEEEecC
Q 009719 213 ----NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 213 ----~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
...++.++.|+|||||.|++...
T Consensus 164 ~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 164 VNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp CCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred hhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 12499999999999999999864
No 351
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=96.73 E-value=6.2e-05 Score=66.33 Aligned_cols=94 Identities=15% Similarity=0.124 Sum_probs=54.0
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc-cccc-cccCCCCCCCC---CccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL-IGVY-HDWCEPFSTYP---RTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL-iG~~-hdwce~fstYP---rtyDLiHa~~~ 444 (527)
.+|||+|||.|.++.+|....-- |+-.|.. ..+..+-+ .|+ +-++ .|..+..+..+ .+||+|.++..
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CeEEEeCCCcCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 47999999999999888655322 3333433 33333332 232 1111 12222111111 27999999866
Q ss_pred cccccCCCCCCCCCcccccceeec--ccccCCcEEEEeCC
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMD--RMLRPEGTVVVRDS 482 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmD--RILRP~G~~iird~ 482 (527)
|. . ....++-++- |+|+|||.+++...
T Consensus 120 ~~--~---------~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 120 YA--M---------DLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp TT--S---------CTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred Cc--h---------hHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 54 1 1234555555 99999999999753
No 352
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=96.72 E-value=0.0011 Score=60.36 Aligned_cols=55 Identities=9% Similarity=0.106 Sum_probs=41.8
Q ss_pred cEEeeccccCCC-------------------------CCCCcccEEEecCcccccc-----cChH------HHHHHHhhc
Q 009719 180 AFVAMLGTRRLP-------------------------FPAFSFDIVHCSRCLIPFT-----AYNA------TYLIEVDRL 223 (527)
Q Consensus 180 a~~~v~dae~LP-------------------------FpD~SFDlV~cs~~l~hw~-----d~~~------~aL~Ei~RV 223 (527)
+.+.++|...++ +++++||+|+|..++ |+. +... .+|.++.|+
T Consensus 65 v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~-~~~g~~~~d~~~~~~~~~~~l~~~~~~ 143 (201)
T 2plw_A 65 VYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAV-PCIGNKIDDHLNSCELTLSITHFMEQY 143 (201)
T ss_dssp CEEEECCTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCC-CCCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEccccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCc-CCCCCcccCHHHHHHHHHHHHHHHHHH
Confidence 456677887777 788999999998765 442 1111 278999999
Q ss_pred ccCCcEEEEecC
Q 009719 224 LRPGGYLVISGP 235 (527)
Q Consensus 224 LRPGG~lviS~p 235 (527)
|||||.|++...
T Consensus 144 LkpgG~lv~~~~ 155 (201)
T 2plw_A 144 INIGGTYIVKMY 155 (201)
T ss_dssp EEEEEEEEEEEE
T ss_pred ccCCCEEEEEEe
Confidence 999999999654
No 353
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.70 E-value=0.00053 Score=73.42 Aligned_cols=76 Identities=26% Similarity=0.264 Sum_probs=53.6
Q ss_pred cChHHHHHHHHHc----CCCcEEeeccccCCC-CCCCcccEEEe----cC--cccc-------cccC--------hHHHH
Q 009719 164 DSHKAQIQFALER----GIPAFVAMLGTRRLP-FPAFSFDIVHC----SR--CLIP-------FTAY--------NATYL 217 (527)
Q Consensus 164 D~seaqvq~A~eR----g~pa~~~v~dae~LP-FpD~SFDlV~c----s~--~l~h-------w~d~--------~~~aL 217 (527)
|.++.+++.|+++ |+.+.+..+|+..++ +.+++||+|++ |- .+.+ |... ...+|
T Consensus 133 Dis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL 212 (464)
T 3m6w_A 133 EVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALL 212 (464)
T ss_dssp CSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHH
Confidence 7788888877654 666667778887776 46789999994 31 1111 2111 13489
Q ss_pred HHHhhcccCCcEEEEecCCCCC
Q 009719 218 IEVDRLLRPGGYLVISGPPVQW 239 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp~~~ 239 (527)
.++.|+|||||+|++|+-....
T Consensus 213 ~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 213 AQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp HHHHTTEEEEEEEEEEESCCCG
T ss_pred HHHHHhcCCCcEEEEEeccCch
Confidence 9999999999999999875443
No 354
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=96.70 E-value=0.0034 Score=64.11 Aligned_cols=75 Identities=17% Similarity=0.173 Sum_probs=51.9
Q ss_pred eccCcChHHHHHHHHHcC------C---CcEEeeccccC-CC-CCCCcccEEEecCcccccc--cC--hHHHHHHHhhcc
Q 009719 160 FAPRDSHKAQIQFALERG------I---PAFVAMLGTRR-LP-FPAFSFDIVHCSRCLIPFT--AY--NATYLIEVDRLL 224 (527)
Q Consensus 160 iAp~D~seaqvq~A~eRg------~---pa~~~v~dae~-LP-FpD~SFDlV~cs~~l~hw~--d~--~~~aL~Ei~RVL 224 (527)
+...|.++.+++.|+++. . .+.+..+|+.. ++ +++++||+|++... .++. +. ...++.++.|+|
T Consensus 147 V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~-~p~~~~~~l~~~~~l~~~~~~L 225 (334)
T 1xj5_A 147 IDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSS-DPIGPAKELFEKPFFQSVARAL 225 (334)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCC-CTTSGGGGGGSHHHHHHHHHHE
T ss_pred EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCC-CccCcchhhhHHHHHHHHHHhc
Confidence 333477888999988652 1 35667778654 33 46789999998643 2222 11 134999999999
Q ss_pred cCCcEEEEecC
Q 009719 225 RPGGYLVISGP 235 (527)
Q Consensus 225 RPGG~lviS~p 235 (527)
||||.|++...
T Consensus 226 kpgG~lv~~~~ 236 (334)
T 1xj5_A 226 RPGGVVCTQAE 236 (334)
T ss_dssp EEEEEEEEECC
T ss_pred CCCcEEEEecC
Confidence 99999999754
No 355
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=96.70 E-value=0.00099 Score=70.75 Aligned_cols=54 Identities=7% Similarity=-0.055 Sum_probs=38.2
Q ss_pred cEEeeccccCC--CC--CCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEEecC
Q 009719 180 AFVAMLGTRRL--PF--PAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~~v~dae~L--PF--pD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+..+|.... +| .+++||+|+++..+ +.++.. .+|.|+.|+|||||++++..+
T Consensus 303 V~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~-~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 303 VEFSLKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLN-KKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp EEEEESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHH-HHHHHHHTTCCTTCEEEESSC
T ss_pred eEEEEcCccccccccccccCCCCEEEEeCcc-ccccHH-HHHHHHHHhCCCCeEEEEeec
Confidence 44555554332 33 36899999987665 333333 489999999999999999865
No 356
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=96.70 E-value=0.00047 Score=66.00 Aligned_cols=87 Identities=14% Similarity=0.091 Sum_probs=54.5
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhccc-c-ccccccCCCCCCCCCccchhhhcCcccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDRGL-I-GVYHDWCEPFSTYPRTYDLIHVSGIESLIK 449 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eRGL-i-G~~hdwce~fstYPrtyDLiHa~~~fs~~~ 449 (527)
.+|||+|||.|.++..|.+. ..-|. -.|.. ..+..+-+++- + =+..|.. .++.-+.+||+|.+...
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~~~~~v~---~vD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~----- 157 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADALPEITTF---GLDVSKVAIKAAAKRYPQVTFCVASSH-RLPFSDTSMDAIIRIYA----- 157 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTCTTSEEE---EEESCHHHHHHHHHHCTTSEEEECCTT-SCSBCTTCEEEEEEESC-----
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCeEE---EEeCCHHHHHHHHHhCCCcEEEEcchh-hCCCCCCceeEEEEeCC-----
Confidence 47999999999999888654 32222 22322 45555555541 1 1111221 22222378999987422
Q ss_pred CCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 450 NPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 450 ~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
...+-|+-|+|||||.+++.+
T Consensus 158 -----------~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 158 -----------PCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp -----------CCCHHHHHHHEEEEEEEEEEE
T ss_pred -----------hhhHHHHHHhcCCCcEEEEEE
Confidence 235789999999999999875
No 357
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=96.70 E-value=0.00022 Score=67.09 Aligned_cols=92 Identities=14% Similarity=0.267 Sum_probs=57.1
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhc----cc---cc-cccccCCCCCCC--CCccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDR----GL---IG-VYHDWCEPFSTY--PRTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eR----GL---iG-~~hdwce~fstY--PrtyDLiHa 441 (527)
.+|||+|||.|.++.+|... .. +|+-.+.. ..+..+-++ |+ +- +..|..+..+.. +.+||+|-+
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPEA---TIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTTC---EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CEEEEecCCCcHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 48999999999999888543 22 22333332 444444443 43 21 122333322222 468999987
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+.... ....+|-++-|+|+|||.+++.+
T Consensus 133 ~~~~~------------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAAKG------------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGGGS------------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCCHH------------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 64433 23568888999999999999985
No 358
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.69 E-value=0.00071 Score=70.58 Aligned_cols=45 Identities=22% Similarity=0.315 Sum_probs=36.9
Q ss_pred CCCCCCcccEEEecCcccccccCh--------------------------------------HHHHHHHhhcccCCcEEE
Q 009719 190 LPFPAFSFDIVHCSRCLIPFTAYN--------------------------------------ATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 190 LPFpD~SFDlV~cs~~l~hw~d~~--------------------------------------~~aL~Ei~RVLRPGG~lv 231 (527)
-.||++|||+|+++.+| ||..+. ..+|+...|+|||||+++
T Consensus 144 rlfP~~S~d~v~Ss~aL-HWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mv 222 (374)
T 3b5i_A 144 RLFPARTIDFFHSAFSL-HWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMF 222 (374)
T ss_dssp CCSCTTCEEEEEEESCT-TBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred ccCCCcceEEEEeccee-eeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 45999999999999997 885421 125888999999999999
Q ss_pred EecC
Q 009719 232 ISGP 235 (527)
Q Consensus 232 iS~p 235 (527)
++..
T Consensus 223 l~~~ 226 (374)
T 3b5i_A 223 LVCL 226 (374)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9765
No 359
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=96.67 E-value=0.00056 Score=64.94 Aligned_cols=104 Identities=12% Similarity=0.145 Sum_probs=66.9
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc----cccc----cccccCCCCCCCCCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR----GLIG----VYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR----GLiG----~~hdwce~fstYPrtyDLiHa~ 442 (527)
.+|+|+|||.|.++.+|... ..-|..+ |.. ..+..+-++ |+-. ...|..+.|+ ..+||+|-++
T Consensus 95 ~~vldiG~G~G~~~~~l~~~~~~~~~v~~~---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~v~~~ 169 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVGPEGRVVSY---EIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIE--EENVDHVILD 169 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCC--CCSEEEEEEC
T ss_pred CEEEEecCCchHHHHHHHHHhCCCeEEEEE---ecCHHHHHHHHHHHHHcCCCCceEEEECchhhccC--CCCcCEEEEC
Confidence 57999999999999988654 3333332 332 444444443 5432 3345555543 3679998763
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVR 497 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~ 497 (527)
. -....+|-++-|+|+|||.+++.. ..+...++.+.++...
T Consensus 170 -----~---------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 170 -----L---------PQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp -----S---------SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred -----C---------CCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 1 122568999999999999999875 4555666666655554
No 360
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.67 E-value=0.0024 Score=58.48 Aligned_cols=84 Identities=7% Similarity=-0.105 Sum_probs=54.9
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCCCCcccEEEecCcccccccC-hHHHHHHHh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAY-NATYLIEVD 221 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~-~~~aL~Ei~ 221 (527)
.|.++.+|...+.. .+...|.++.+++.|+++...+.+.++|+..+| ++||+|++.-.++|+.+. ...++.++.
T Consensus 62 ~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~ 136 (200)
T 1ne2_A 62 NGILACGSYLLGAE--SVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVKHSDRAFIDKAF 136 (200)
T ss_dssp TCHHHHHHHHTTBS--EEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-------CHHHHHHHH
T ss_pred ccHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccCchhHHHHHHHH
Confidence 34444455555432 233337788999999887545677888888876 799999999888777542 234899999
Q ss_pred hcccCCcEEEEe
Q 009719 222 RLLRPGGYLVIS 233 (527)
Q Consensus 222 RVLRPGG~lviS 233 (527)
|+| |+.+++.
T Consensus 137 ~~~--g~~~~~~ 146 (200)
T 1ne2_A 137 ETS--MWIYSIG 146 (200)
T ss_dssp HHE--EEEEEEE
T ss_pred Hhc--CcEEEEE
Confidence 999 6644444
No 361
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=96.67 E-value=0.0016 Score=66.63 Aligned_cols=88 Identities=14% Similarity=0.100 Sum_probs=58.8
Q ss_pred hcccccccc--CCeeEEeeccCcChHHHHHHHHHcC-C----CcEEeeccccCC--CCCCCcccEEEecCcccccccC--
Q 009719 144 ASFGGSMLS--ENILTLSFAPRDSHKAQIQFALERG-I----PAFVAMLGTRRL--PFPAFSFDIVHCSRCLIPFTAY-- 212 (527)
Q Consensus 144 gsfga~Ll~--r~V~~msiAp~D~seaqvq~A~eRg-~----pa~~~v~dae~L--PFpD~SFDlV~cs~~l~hw~d~-- 212 (527)
|+.+.+|+. .++. +...|+++.+++.|+++- . .+.+.++|+... .+++++||+|++... .|+...
T Consensus 101 G~la~~la~~~p~~~---v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~-~~~~~~~~ 176 (317)
T 3gjy_A 101 CTMARYFADVYPQSR---NTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVF-AGAITPQN 176 (317)
T ss_dssp GHHHHHHHHHSTTCE---EEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCS-TTSCCCGG
T ss_pred CHHHHHHHHHCCCcE---EEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCC-Cccccchh
Confidence 444445555 2442 333477889999998863 1 245677786553 467899999998643 232211
Q ss_pred --hHHHHHHHhhcccCCcEEEEecC
Q 009719 213 --NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 213 --~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
...++.++.|+|||||.|++...
T Consensus 177 L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 177 FTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp GSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHhcCCCcEEEEEec
Confidence 13499999999999999998654
No 362
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=96.66 E-value=0.00014 Score=67.33 Aligned_cols=92 Identities=14% Similarity=0.126 Sum_probs=54.5
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhh----hccccc---cc-cccCCCCCCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIY----DRGLIG---VY-HDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~----eRGLiG---~~-hdwce~fstYPrtyDLiHa~~ 443 (527)
++|||+|||.|.++.+|... ..-|..|-.. +..+.++- +.|+-. +. .|..+.++..+. ||+|.++.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMIDPD--RDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEEESC--HHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 58999999999999888654 2222222211 12233222 224321 11 123232233456 99997752
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
- .-....++-++-|+|+|||.+++.+
T Consensus 135 ~------------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 D------------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T------------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred C------------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 1 2234677888899999999999965
No 363
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.66 E-value=0.00094 Score=63.47 Aligned_cols=68 Identities=21% Similarity=0.219 Sum_probs=48.5
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccc----cCCCCCC--CcccEEEecCcccccccChHHHHHHHhhcccCCcEEE
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGT----RRLPFPA--FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~da----e~LPFpD--~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
|.++.+++.|+++ |+. +.+.++++ ..+++.+ ++||+|++.... .....++.++.|+|||||+++
T Consensus 104 D~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~~----~~~~~~l~~~~~~LkpgG~lv 179 (232)
T 3cbg_A 104 DQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDADK----RNYPRYYEIGLNLLRRGGLMV 179 (232)
T ss_dssp ESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECSCG----GGHHHHHHHHHHTEEEEEEEE
T ss_pred ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECCCH----HHHHHHHHHHHHHcCCCeEEE
Confidence 6677888888754 543 45666664 3455655 899999987542 222348999999999999999
Q ss_pred EecC
Q 009719 232 ISGP 235 (527)
Q Consensus 232 iS~p 235 (527)
+...
T Consensus 180 ~~~~ 183 (232)
T 3cbg_A 180 IDNV 183 (232)
T ss_dssp EECT
T ss_pred EeCC
Confidence 9653
No 364
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=96.66 E-value=0.00012 Score=66.72 Aligned_cols=122 Identities=15% Similarity=0.073 Sum_probs=67.7
Q ss_pred cchhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc--c
Q 009719 347 FEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL--I 419 (527)
Q Consensus 347 f~~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL--i 419 (527)
|...++...+.+-++..... ... =.+|||+|||.|.++.++.+.+.. .|+-.|.. ..+..+-+ .|+ +
T Consensus 22 ~rp~~~~~~~~l~~~l~~~~--~~~--~~~vLDlgcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v 95 (189)
T 3p9n_A 22 TRPTTDRVRESLFNIVTARR--DLT--GLAVLDLYAGSGALGLEALSRGAA--SVLFVESDQRSAAVIARNIEALGLSGA 95 (189)
T ss_dssp C---CHHHHHHHHHHHHHHS--CCT--TCEEEEETCTTCHHHHHHHHTTCS--EEEEEECCHHHHHHHHHHHHHHTCSCE
T ss_pred CccCcHHHHHHHHHHHHhcc--CCC--CCEEEEeCCCcCHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCCce
Confidence 45566667666665554321 012 247999999999999866555432 12222222 33333322 243 1
Q ss_pred ccc-cccCCCCCCC-CCccchhhhcCccccccCCCCCCCCCcccccceeecc--cccCCcEEEEeCC
Q 009719 420 GVY-HDWCEPFSTY-PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDR--MLRPEGTVVVRDS 482 (527)
Q Consensus 420 G~~-hdwce~fstY-PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDR--ILRP~G~~iird~ 482 (527)
-++ .|..+....+ +.+||+|-++..|... .-.+..++-++-| +|+|||.+++...
T Consensus 96 ~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~--------~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 96 TLRRGAVAAVVAAGTTSPVDLVLADPPYNVD--------SADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EEEESCHHHHHHHCCSSCCSEEEECCCTTSC--------HHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred EEEEccHHHHHhhccCCCccEEEECCCCCcc--------hhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 111 1222111113 4789999887655421 1234678888888 9999999999753
No 365
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=96.65 E-value=0.00092 Score=62.78 Aligned_cols=106 Identities=9% Similarity=0.034 Sum_probs=66.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc---c-ccccccCCCCCCCCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL---I-GVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL---i-G~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
.+|||+|||.|.++.+|.+... +|+-.|.. ..+..+-++ |+ + -...|..+.+. -...||+|-++.
T Consensus 93 ~~vldiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~~-- 166 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEVAG---EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV-PEGIFHAAFVDV-- 166 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHHSS---EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC-CTTCBSEEEECS--
T ss_pred CEEEEeCCCccHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc-CCCcccEEEECC--
Confidence 4899999999999988876532 34444433 455555443 33 1 12234444320 136899987631
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCce
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWT 499 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~ 499 (527)
-+...++-++-|+|+|||.+++... .+.+.++.+.++.. |.
T Consensus 167 ------------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~ 208 (248)
T 2yvl_A 167 ------------REPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY-FG 208 (248)
T ss_dssp ------------SCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EE
T ss_pred ------------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CC
Confidence 1235688889999999999999865 45566666665544 44
No 366
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.65 E-value=0.003 Score=62.94 Aligned_cols=89 Identities=10% Similarity=0.045 Sum_probs=56.4
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHcC---------CCcEEeeccccC-CCCCCCcccEEEecCccccccc-
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERG---------IPAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTA- 211 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg---------~pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d- 211 (527)
|..+..++.+ +.. .+...|.++.+++.|+++- ..+.+..+|+.. ++..+++||+|++... .+|..
T Consensus 102 G~~~~~l~~~~~~~--~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~-~~~~~~ 178 (296)
T 1inl_A 102 GGTLREVLKHDSVE--KAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDST-DPTAGQ 178 (296)
T ss_dssp CHHHHHHTTSTTCS--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC--------
T ss_pred CHHHHHHHhcCCCC--EEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcCC-CcccCc
Confidence 4444455554 221 2333367788888887652 134566777654 5667789999998532 23221
Q ss_pred ----ChHHHHHHHhhcccCCcEEEEecC
Q 009719 212 ----YNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 212 ----~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
....++.++.|+|||||.|++...
T Consensus 179 ~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 179 GGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp ---CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred hhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 113489999999999999999764
No 367
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=96.65 E-value=0.0033 Score=63.93 Aligned_cols=67 Identities=15% Similarity=0.114 Sum_probs=52.4
Q ss_pred HHHHHHHHHcC----C-CcEEeeccccCCCCCCCcccEEEecCcccccccChH-HHHHHHhhcccCCcEEEEecC
Q 009719 167 KAQIQFALERG----I-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 167 eaqvq~A~eRg----~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+++.|+++- . .+.+..+|....|+++ +|+++++.++|+|++... .+|+++.|+|+|||++++...
T Consensus 212 p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~--~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 212 PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPE--ADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp HHHHHHHHHHSCC--CCSEEEEESCTTTSCCCC--CSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHHHHhhhhcccCceeeecCccccCCCCC--ceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 56788887652 1 2456677876666664 699999999999988753 489999999999999999765
No 368
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=96.64 E-value=0.00038 Score=70.83 Aligned_cols=97 Identities=14% Similarity=0.200 Sum_probs=61.4
Q ss_pred CCCeeeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHhhh-ccccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 371 TPAIRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVIYD-RGLIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 371 ~~~iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi~e-RGLiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
......|+|+|||.|.++.+|.+. .+-+..+= -+..+..+-+ .++--+.+|..++ +|. ||+|.+..++-.
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D---~~~~~~~a~~~~~v~~~~~d~~~~---~~~-~D~v~~~~~lh~ 279 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFD---LPQVIENAPPLSGIEHVGGDMFAS---VPQ-GDAMILKAVCHN 279 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEE---CHHHHTTCCCCTTEEEEECCTTTC---CCC-EEEEEEESSGGG
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeC---hHHHHHhhhhcCCCEEEeCCcccC---CCC-CCEEEEeccccc
Confidence 345689999999999999998543 33332111 1111111111 1222233444443 455 999999999987
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
|.+ . ....+|-++=|+|+|||.++|.|
T Consensus 280 ~~d-----~--~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 280 WSD-----E--KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp SCH-----H--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCH-----H--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 741 1 12378999999999999999874
No 369
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=96.64 E-value=0.0024 Score=63.13 Aligned_cols=90 Identities=11% Similarity=0.108 Sum_probs=58.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcCC---------CcEEeeccccC-CCCCCCcccEEEecCcccccccCh
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI---------PAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYN 213 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~---------pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~ 213 (527)
|..+..++...- ...+...|.++.+++.|+++-. .+.+..+|+.. ++..+++||+|++... .|+....
T Consensus 90 G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~-~~~~~~~ 167 (283)
T 2i7c_A 90 GGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSS-DPIGPAE 167 (283)
T ss_dssp SHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECC-CTTTGGG
T ss_pred CHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcCC-CCCCcch
Confidence 444444554420 1133334778899999987621 24566677654 4445789999998643 3432221
Q ss_pred ----HHHHHHHhhcccCCcEEEEecC
Q 009719 214 ----ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 214 ----~~aL~Ei~RVLRPGG~lviS~p 235 (527)
..++.++.|+|||||.+++...
T Consensus 168 ~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 168 TLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp GGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred hhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 3499999999999999999865
No 370
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.62 E-value=0.0022 Score=63.79 Aligned_cols=101 Identities=15% Similarity=0.104 Sum_probs=52.2
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCC--CC-CchhH-hhhcccccc--ccccCCCCCCCCCccchhhhcCccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPAR--KS-STLSV-IYDRGLIGV--YHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~--~~-ntl~v-i~eRGLiG~--~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
-..|||+|||.|+|+..|.+. .|.-+-+-|.. +. +.+.. .+.-++.-+ -.|-. .++ +.+||+|-|+..+.
T Consensus 83 g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~-~l~--~~~fD~Vvsd~~~~ 159 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVT-KME--PFQADTVLCDIGES 159 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGG-GCC--CCCCSEEEECCCCC
T ss_pred CCEEEEeccCCCHHHHHHHHcCCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHh-hCC--CCCcCEEEECCCcC
Confidence 358999999999998888665 45555444421 00 10000 000011111 11211 133 57899998874421
Q ss_pred cccCCCCCCCCCcccccceeecccccCCc--EEEEe
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEG--TVVVR 480 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G--~~iir 480 (527)
.-. ...+.=....+|-|+.|+|+||| .+++.
T Consensus 160 ~~~---~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 160 NPT---AAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CSC---HHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CCc---hhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 000 00000000126778999999999 88885
No 371
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=96.61 E-value=0.0011 Score=66.47 Aligned_cols=89 Identities=12% Similarity=0.098 Sum_probs=56.4
Q ss_pred hhccccccccCC-eeEEeeccCcChHHHHHHHHHcC---------CCcEEeeccccC-CCCCCCcccEEEecCccccccc
Q 009719 143 VASFGGSMLSEN-ILTLSFAPRDSHKAQIQFALERG---------IPAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTA 211 (527)
Q Consensus 143 vgsfga~Ll~r~-V~~msiAp~D~seaqvq~A~eRg---------~pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d 211 (527)
.|.++..|+.+. .. .+...|.++.+++.|+++- ..+.+..+|+.. |+..+++||+|++... .|+..
T Consensus 106 ~G~~~~~l~~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~~-~~~~~ 182 (304)
T 2o07_A 106 DGGVLREVVKHPSVE--SVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSS-DPMGP 182 (304)
T ss_dssp TSHHHHHHTTCTTCC--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEECC------
T ss_pred chHHHHHHHHcCCCC--EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEECCC-CCCCc
Confidence 344444555542 11 2333367788999888652 124566777654 6667899999998643 33321
Q ss_pred C----hHHHHHHHhhcccCCcEEEEec
Q 009719 212 Y----NATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 212 ~----~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
. ...++.++.|+|||||.|++..
T Consensus 183 ~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 183 AESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp ------CHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhHHHHHHHHHhccCCCeEEEEec
Confidence 1 1238999999999999999976
No 372
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.60 E-value=0.00093 Score=69.81 Aligned_cols=75 Identities=20% Similarity=0.177 Sum_probs=50.9
Q ss_pred cChHHHHHHHHHc----CCCcEEeeccccCCC--CCCCcccEEEe----cC--cccccccC---------------hHHH
Q 009719 164 DSHKAQIQFALER----GIPAFVAMLGTRRLP--FPAFSFDIVHC----SR--CLIPFTAY---------------NATY 216 (527)
Q Consensus 164 D~seaqvq~A~eR----g~pa~~~v~dae~LP--FpD~SFDlV~c----s~--~l~hw~d~---------------~~~a 216 (527)
|.++.+++.++++ |+.+.+..+|+..++ |++++||+|++ +. .+.+-++. ...+
T Consensus 277 D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~ 356 (429)
T 1sqg_A 277 DIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEI 356 (429)
T ss_dssp ESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHH
Confidence 4444555555433 666777788988887 78889999995 32 22221110 0248
Q ss_pred HHHHhhcccCCcEEEEecCCCC
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQ 238 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~ 238 (527)
|.++.++|||||++++++....
T Consensus 357 L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 357 LDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp HHHHGGGEEEEEEEEEEESCCC
T ss_pred HHHHHHhcCCCCEEEEEECCCC
Confidence 9999999999999999986433
No 373
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=96.60 E-value=0.00076 Score=64.29 Aligned_cols=127 Identities=15% Similarity=0.111 Sum_probs=69.9
Q ss_pred eEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHh----hhcccc----ccc-cccCCCCCCC-CCccchhhhc
Q 009719 376 NIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVI----YDRGLI----GVY-HDWCEPFSTY-PRTYDLIHVS 442 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi----~eRGLi----G~~-hdwce~fstY-PrtyDLiHa~ 442 (527)
+|||+|||.|.++.+|... .--|..|=... ..+.++ -+.|+- -+. .|-.+.++.+ +.+||+|-++
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPES--EHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCH--HHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 8999999999988877531 22222222111 222222 122332 111 1111222334 4789999765
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC------------HHHHHHHHHHHhcCCce----eEEecCC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS------------PEVIDKVSRIANTVRWT----AAVHDKE 506 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~------------~~~~~~i~~i~~~l~W~----~~~~~~e 506 (527)
.-.. ....++-++-|+|||||.+++.|- ......++++.+.+++. +.+..
T Consensus 137 ~~~~------------~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp-- 202 (221)
T 3dr5_A 137 VSPM------------DLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLP-- 202 (221)
T ss_dssp CCTT------------THHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEES--
T ss_pred CcHH------------HHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEee--
Confidence 3222 234577788899999999999752 11233455555555544 44431
Q ss_pred CCCCCCceEEEEEecc
Q 009719 507 PGSNGREKILVATKSL 522 (527)
Q Consensus 507 ~~~~~~ekiLi~~K~~ 522 (527)
-.+.+++++|.+
T Consensus 203 ----~gdGl~~~~~~~ 214 (221)
T 3dr5_A 203 ----LGAGLTVVTKAL 214 (221)
T ss_dssp ----STTCEEEEEECC
T ss_pred ----ccchHHHHHHHH
Confidence 135799999875
No 374
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.59 E-value=0.00063 Score=61.58 Aligned_cols=139 Identities=14% Similarity=0.126 Sum_probs=62.9
Q ss_pred eeEeecCCCccchhhhccCC-------------CeeEEEecCCCCCCchhHhhhccccccccccCCC-C-----CCCC-C
Q 009719 375 RNIMDMNAFFGGFAAALTSD-------------PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEP-F-----STYP-R 434 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-------------~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~-f-----stYP-r 434 (527)
.+|||+|||.|.++.+|.+. .|+.+-+.|......+.++ . -.|..+. + ..++ .
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~-~------~~d~~~~~~~~~~~~~~~~~ 96 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFL-C------PADVTDPRTSQRILEVLPGR 96 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEE-C------SCCTTSHHHHHHHHHHSGGG
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEE-E------eccCCCHHHHHHHHHhcCCC
Confidence 58999999999999888543 2444433332111111111 0 1111110 0 0023 5
Q ss_pred ccchhhhcCccccccCCCCCC--CCCcccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCceeEEe-cCCCCCC
Q 009719 435 TYDLIHVSGIESLIKNPGSNK--NSCSLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWTAAVH-DKEPGSN 510 (527)
Q Consensus 435 tyDLiHa~~~fs~~~~~~~~~--~rC~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~~~~~-~~e~~~~ 510 (527)
+||+|-++..+........+. .......+|-|+-|+|||||.+++.+- .+....+.+.++..--++... +....+.
T Consensus 97 ~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~f~~v~~~~~~~~~~~ 176 (196)
T 2nyu_A 97 RADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRKE 176 (196)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHHEEEEEEECCC-----
T ss_pred CCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHHhcceEEECCcccCcc
Confidence 899998865332100000000 000013578889999999999999842 112223333333221122222 2222233
Q ss_pred CCceEEEEEe
Q 009719 511 GREKILVATK 520 (527)
Q Consensus 511 ~~ekiLi~~K 520 (527)
..|..+++..
T Consensus 177 ~~e~~~v~~g 186 (196)
T 2nyu_A 177 SSEVYFLATQ 186 (196)
T ss_dssp ---EEEEEEE
T ss_pred CceEEEEeee
Confidence 4677777654
No 375
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=96.58 E-value=0.001 Score=74.31 Aligned_cols=96 Identities=16% Similarity=0.154 Sum_probs=65.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC---cEEeeccccC-CCCCCCcccEEEecCcc--------
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP---AFVAMLGTRR-LPFPAFSFDIVHCSRCL-------- 206 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p---a~~~v~dae~-LPFpD~SFDlV~cs~~l-------- 206 (527)
+|.|+-+++..|.. .+...|.++.+++.|+++ |+. +.+.++|+.. |+..+++||+|++.--.
T Consensus 550 tG~~sl~aa~~ga~--~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~ 627 (703)
T 3v97_A 550 TGSATVHAGLGGAR--STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRME 627 (703)
T ss_dssp TCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCSBC------
T ss_pred hhHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCccccCCccch
Confidence 66677666766653 233337788899888764 554 5677788755 67778999999985311
Q ss_pred --cccccChHHHHHHHhhcccCCcEEEEecCCCCCC
Q 009719 207 --IPFTAYNATYLIEVDRLLRPGGYLVISGPPVQWP 240 (527)
Q Consensus 207 --~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~~~~ 240 (527)
.+....-..++.++.|+|||||+|+++.....+.
T Consensus 628 ~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~ 663 (703)
T 3v97_A 628 DAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFR 663 (703)
T ss_dssp -CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCC
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccc
Confidence 1111122237899999999999999998764444
No 376
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.57 E-value=0.00035 Score=74.70 Aligned_cols=109 Identities=14% Similarity=0.175 Sum_probs=64.4
Q ss_pred HHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchh----Hhhhccc---cccc-cccCCCCC
Q 009719 360 YYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLS----VIYDRGL---IGVY-HDWCEPFS 430 (527)
Q Consensus 360 ~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~----vi~eRGL---iG~~-hdwce~fs 430 (527)
.|.+.+...+....-..|||+|||.|.++..|...+. -|.-|= ....+. .+.+.|+ |-+. .|+.+ +
T Consensus 145 ~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD---~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~-~- 219 (480)
T 3b3j_A 145 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVE---ASTMAQHAEVLVKSNNLTDRIVVIPGKVEE-V- 219 (480)
T ss_dssp HHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEE---CHHHHHHHHHHHHHTTCTTTEEEEESCTTT-C-
T ss_pred HHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEE---cHHHHHHHHHHHHHcCCCCcEEEEECchhh-C-
Confidence 3554443333222335899999999999988876553 232222 111222 2333455 2222 23333 2
Q ss_pred CCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 431 TYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 431 tYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
.+|..||+|-+..++..+. .-.+...+.++-|+|+|||.+++.
T Consensus 220 ~~~~~fD~Ivs~~~~~~~~-------~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 220 SLPEQVDIIISEPMGYMLF-------NERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CCSSCEEEEECCCCHHHHT-------CHHHHHHHHHGGGGEEEEEEEESC
T ss_pred ccCCCeEEEEEeCchHhcC-------cHHHHHHHHHHHHhcCCCCEEEEE
Confidence 2467899999977655442 113455777999999999999853
No 377
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=96.56 E-value=0.00096 Score=68.12 Aligned_cols=95 Identities=19% Similarity=0.186 Sum_probs=61.7
Q ss_pred CCCeeeEeecCCCccchhhhccCC--C--eeEEEecCCCCCCchhHhhhc-cccccccccCCCCCCCCCccchhhhcCcc
Q 009719 371 TPAIRNIMDMNAFFGGFAAALTSD--P--VWVMNVVPARKSSTLSVIYDR-GLIGVYHDWCEPFSTYPRTYDLIHVSGIE 445 (527)
Q Consensus 371 ~~~iRnvmDm~ag~GgFaAaL~~~--~--VwvMnvvp~~~~ntl~vi~eR-GLiG~~hdwce~fstYPrtyDLiHa~~~f 445 (527)
....+.|+|+|||.|.++.+|.+. . +.+.-+ | ..+..+-++ ++-=+-+|.-++ +|.. |+|.+..++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~D~~~~---~p~~-D~v~~~~vl 269 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-P----HVISEAPQFPGVTHVGGDMFKE---VPSG-DTILMKWIL 269 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H----HHHTTCCCCTTEEEEECCTTTC---CCCC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-H----HHHHhhhhcCCeEEEeCCcCCC---CCCC-CEEEehHHh
Confidence 556789999999999999999542 2 333333 2 111111111 222233444443 4555 999999999
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
-.|. + -....+|-++=|.|+|||.++|-|
T Consensus 270 h~~~------d-~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 270 HDWS------D-QHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp GGSC------H-HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccCC------H-HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 8774 1 123578999999999999999975
No 378
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=96.55 E-value=0.00073 Score=63.80 Aligned_cols=130 Identities=15% Similarity=0.196 Sum_probs=66.5
Q ss_pred eeEeecCCCccchhhhccCC-C---eeEEEecCCCCCCchhHhhhc-----cccccccccCCCC--CCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD-P---VWVMNVVPARKSSTLSVIYDR-----GLIGVYHDWCEPF--STYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-~---VwvMnvvp~~~~ntl~vi~eR-----GLiG~~hdwce~f--stYPrtyDLiHa~~ 443 (527)
.+|||+|||.|.++..|.+. + |..+-+.| ..+..+-++ .+.-+..|-.++. ..++.+||+|-.+
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~----~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~- 150 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAIEYAP----RIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED- 150 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEEESCH----HHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC-
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEEECCH----HHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe-
Confidence 47999999999999888544 2 33333332 212211111 1111122322210 1124679997621
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEe----CC-----HH--HHHHHHHHHhcCCceeEE-ecCCCCCCC
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR----DS-----PE--VIDKVSRIANTVRWTAAV-HDKEPGSNG 511 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir----d~-----~~--~~~~i~~i~~~l~W~~~~-~~~e~~~~~ 511 (527)
+. +.=....+|-++-|+|+|||.+++. .. .. .-+.++ ++....++... .+.+.. ..
T Consensus 151 -~~---------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~-~~ 218 (230)
T 1fbn_A 151 -VA---------QPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPF-EK 218 (230)
T ss_dssp -CC---------STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTT-ST
T ss_pred -cC---------ChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCC-cc
Confidence 11 1001245688999999999999993 21 11 124455 44544555432 233222 12
Q ss_pred CceEEEEEec
Q 009719 512 REKILVATKS 521 (527)
Q Consensus 512 ~ekiLi~~K~ 521 (527)
.--+++++|+
T Consensus 219 ~~~~v~~~k~ 228 (230)
T 1fbn_A 219 DHVMFVGIWE 228 (230)
T ss_dssp TEEEEEEEEC
T ss_pred ceEEEEEEeC
Confidence 3457778874
No 379
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=96.54 E-value=0.002 Score=64.46 Aligned_cols=72 Identities=14% Similarity=0.180 Sum_probs=46.8
Q ss_pred CcChHHHHHHHHHcC----------CCcEEeeccccC-CCCCCCcccEEEecCcccccccCh----HHHHHHHhhcccCC
Q 009719 163 RDSHKAQIQFALERG----------IPAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYN----ATYLIEVDRLLRPG 227 (527)
Q Consensus 163 ~D~seaqvq~A~eRg----------~pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~----~~aL~Ei~RVLRPG 227 (527)
.|+++++++.|+++- ..+.+..+|+.. ++.++++||+|++... .++.... ..++.++.|+||||
T Consensus 113 VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~-~p~~~~~~l~~~~f~~~~~~~Lkpg 191 (294)
T 3adn_A 113 VEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCT-DPIGPGESLFTSAFYEGCKRCLNPG 191 (294)
T ss_dssp ECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEECC-----------CCHHHHHHHHHTEEEE
T ss_pred EECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEECCC-CccCcchhccHHHHHHHHHHhcCCC
Confidence 366778888887641 124566677544 5667899999998643 2432221 34999999999999
Q ss_pred cEEEEecC
Q 009719 228 GYLVISGP 235 (527)
Q Consensus 228 G~lviS~p 235 (527)
|.|++...
T Consensus 192 G~lv~~~~ 199 (294)
T 3adn_A 192 GIFVAQNG 199 (294)
T ss_dssp EEEEEEEE
T ss_pred CEEEEecC
Confidence 99999653
No 380
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.53 E-value=0.00051 Score=64.02 Aligned_cols=89 Identities=16% Similarity=0.150 Sum_probs=51.6
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhhhc----c--------ccccccccCCCCCCCCCccchh
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIYDR----G--------LIGVYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~eR----G--------LiG~~hdwce~fstYPrtyDLi 439 (527)
.+|||+|||.|.+++.|... ..-|..+-.. +..+..+-++ | +--+..|..+.+. -+.+||+|
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~i 155 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTGKVIGIDHI--KELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYDAI 155 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEEEEESC--HHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCC--HHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-cCCCcCEE
Confidence 48999999999999888542 1222222211 1223333221 1 1112223332211 13679999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+++..+. .++-++-|+|+|||.+++.-
T Consensus 156 ~~~~~~~---------------~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 156 HVGAAAP---------------VVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EECSBBS---------------SCCHHHHHTEEEEEEEEEEE
T ss_pred EECCchH---------------HHHHHHHHhcCCCcEEEEEE
Confidence 9865442 35567889999999999964
No 381
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=96.53 E-value=0.0013 Score=64.08 Aligned_cols=108 Identities=11% Similarity=0.107 Sum_probs=66.7
Q ss_pred eeeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc-----cc--cc-cccccCCCCCCCCCccchhhh
Q 009719 374 IRNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR-----GL--IG-VYHDWCEPFSTYPRTYDLIHV 441 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR-----GL--iG-~~hdwce~fstYPrtyDLiHa 441 (527)
-.+|||+|||.|+++..|.+. ..-|.- .|.. ..+..+-++ |+ +- ...|..+.++ +.+||+|-+
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~~v~~---vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~--~~~fD~Vi~ 185 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKGTLTV---VERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS--DQMYDAVIA 185 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSSEEEE---ECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC--SCCEEEEEE
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCCEEEE---EECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc--CCCccEEEE
Confidence 358999999999999888654 232222 2332 444444433 43 11 2234444332 268999876
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHH-HHHHHHHHHhcCCcee
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPE-VIDKVSRIANTVRWTA 500 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~-~~~~i~~i~~~l~W~~ 500 (527)
+ .. +...+|-++-|+|+|||.+++.+... ...++.+.++...|..
T Consensus 186 ~-----~~---------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 186 D-----IP---------DPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHH 231 (275)
T ss_dssp C-----CS---------CGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEE
T ss_pred c-----Cc---------CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeE
Confidence 2 11 12568889999999999999987543 5566666666555553
No 382
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=96.51 E-value=0.00051 Score=65.66 Aligned_cols=98 Identities=13% Similarity=0.081 Sum_probs=50.1
Q ss_pred eeEeecCCCccchhhhcc--CCCeeEEEecCCCCC-Cch-hHh-------hhcccccc--ccccCCCCCC-CCCccchhh
Q 009719 375 RNIMDMNAFFGGFAAALT--SDPVWVMNVVPARKS-STL-SVI-------YDRGLIGV--YHDWCEPFST-YPRTYDLIH 440 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~--~~~VwvMnvvp~~~~-ntl-~vi-------~eRGLiG~--~hdwce~fst-YPrtyDLiH 440 (527)
..|||+|||.|.++.+|. ....-|.-| |.. ..+ .++ .+.|+-.+ .+.=.+.++. +...+|.++
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~~v~Gv---D~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNTFYIGI---DPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTEEEEEE---CSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 679999999999999987 444434333 322 322 222 23454221 1111122211 113344444
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEE
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
....+.... ...+-....+|-|+-|+|||||.+++
T Consensus 103 ~~~~~~~~~----~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 103 ILFPWGTLL----EYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EESCCHHHH----HHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EeCCCcHHh----hhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 321110000 00011124578999999999999999
No 383
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.48 E-value=0.00068 Score=65.60 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=47.0
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CCC------CCCcccEEEecCcccccccChHHHHHHHhhcccCCcEE
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LPF------PAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYL 230 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LPF------pD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~l 230 (527)
|.++.+++.|+++ |+. +.+..+++.. ||. ++++||+|++.... .....++.++.|+|||||++
T Consensus 111 D~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~~----~~~~~~l~~~~~~LkpGG~l 186 (247)
T 1sui_A 111 DINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDADK----DNYLNYHKRLIDLVKVGGVI 186 (247)
T ss_dssp ESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSCS----TTHHHHHHHHHHHBCTTCCE
T ss_pred ECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCch----HHHHHHHHHHHHhCCCCeEE
Confidence 5566777777653 552 4566677644 453 26899999987432 22234999999999999999
Q ss_pred EEec
Q 009719 231 VISG 234 (527)
Q Consensus 231 viS~ 234 (527)
++..
T Consensus 187 v~d~ 190 (247)
T 1sui_A 187 GYDN 190 (247)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9864
No 384
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=96.46 E-value=0.0016 Score=65.98 Aligned_cols=75 Identities=15% Similarity=0.062 Sum_probs=50.5
Q ss_pred eccCcChHHHHHHHHHcCC---------CcEEeeccccC-CCCCCCcccEEEecCcccccccCh----HHHHHHHhhccc
Q 009719 160 FAPRDSHKAQIQFALERGI---------PAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAYN----ATYLIEVDRLLR 225 (527)
Q Consensus 160 iAp~D~seaqvq~A~eRg~---------pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~~----~~aL~Ei~RVLR 225 (527)
+...|.++.+++.|+++-. .+.+..+|+.. |+.++++||+|++... .|+.... ..++.++.|+||
T Consensus 135 v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~-~~~~~~~~l~t~~~l~~~~~~Lk 213 (314)
T 2b2c_A 135 VTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSS-DPVGPAESLFGQSYYELLRDALK 213 (314)
T ss_dssp EEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC--------------HHHHHHHHEE
T ss_pred EEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCC-CCCCcchhhhHHHHHHHHHhhcC
Confidence 3344778899999987631 24566677654 5567889999998653 3443221 348999999999
Q ss_pred CCcEEEEecC
Q 009719 226 PGGYLVISGP 235 (527)
Q Consensus 226 PGG~lviS~p 235 (527)
|||.+++...
T Consensus 214 pgG~lv~~~~ 223 (314)
T 2b2c_A 214 EDGILSSQGE 223 (314)
T ss_dssp EEEEEEEECC
T ss_pred CCeEEEEECC
Confidence 9999999763
No 385
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=96.42 E-value=0.0024 Score=66.69 Aligned_cols=90 Identities=16% Similarity=0.052 Sum_probs=60.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCC-CCCCCcccEEEecCccccc--------
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRL-PFPAFSFDIVHCSRCLIPF-------- 209 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~L-PFpD~SFDlV~cs~~l~hw-------- 209 (527)
+|.|+-++...|..++.+ |.++.+++.|+++ |+...+.++|+..+ +...+.||+|++.--..+-
T Consensus 225 tG~~sl~~a~~ga~V~av---Dis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~ 301 (393)
T 4dmg_A 225 VGGFALRAARKGAYALAV---DKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVKRPEELPAM 301 (393)
T ss_dssp TTHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCSSGGGHHHH
T ss_pred hhHHHHHHHHcCCeEEEE---ECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCCCHHHHHHH
Confidence 677887887777654444 8888999888764 66656667786553 3323449999986321110
Q ss_pred ccChHHHHHHHhhcccCCcEEEEecC
Q 009719 210 TAYNATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 210 ~d~~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
......++.++.|+|||||+|++++.
T Consensus 302 ~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 302 KRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 01112488899999999999997765
No 386
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=96.39 E-value=0.004 Score=62.97 Aligned_cols=89 Identities=11% Similarity=0.128 Sum_probs=58.0
Q ss_pred hccccccccC-CeeEEeeccCcChHHHHHHHHHcCC---------CcEEeeccccC-CCCCCCcccEEEecCcccccccC
Q 009719 144 ASFGGSMLSE-NILTLSFAPRDSHKAQIQFALERGI---------PAFVAMLGTRR-LPFPAFSFDIVHCSRCLIPFTAY 212 (527)
Q Consensus 144 gsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eRg~---------pa~~~v~dae~-LPFpD~SFDlV~cs~~l~hw~d~ 212 (527)
|..+..++.. +. ..+...|.++.+++.|+++-. .+.+..+|+.. ++..+++||+|++... .++...
T Consensus 128 G~~~~~l~~~~~~--~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~-~p~~~~ 204 (321)
T 2pt6_A 128 GGIIRELCKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSS-DPIGPA 204 (321)
T ss_dssp CHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECC-CSSSGG
T ss_pred cHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECCc-CCCCcc
Confidence 4444445544 22 133334778899999987621 24566677644 5556789999998643 343211
Q ss_pred h----HHHHHHHhhcccCCcEEEEecC
Q 009719 213 N----ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 213 ~----~~aL~Ei~RVLRPGG~lviS~p 235 (527)
. ..++.++.|+|||||.+++...
T Consensus 205 ~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 205 ETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp GGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 1 3489999999999999999654
No 387
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=96.36 E-value=0.00043 Score=64.42 Aligned_cols=98 Identities=10% Similarity=0.065 Sum_probs=56.1
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc----cccc-cccCCCCCCC-CCc-cchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL----IGVY-HDWCEPFSTY-PRT-YDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL----iG~~-hdwce~fstY-Prt-yDLiHa~ 442 (527)
..|||+|||.|.|+.++..... -.|+-+|.. ..+..+-+ .|+ +-++ .|..+..... +.+ ||+|-++
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 3799999999999887544432 123333433 34443333 233 1111 1222211222 367 9999887
Q ss_pred CccccccCCCCCCCCCcccccceee--cccccCCcEEEEeCCHH
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEM--DRMLRPEGTVVVRDSPE 484 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEm--DRILRP~G~~iird~~~ 484 (527)
..|. . -....++-++ -|+|+|||.+++.....
T Consensus 133 ~~~~-~---------~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH-F---------NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS-S---------CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC-C---------ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 5543 1 1235566677 78999999999986543
No 388
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.35 E-value=0.00092 Score=62.27 Aligned_cols=125 Identities=19% Similarity=0.156 Sum_probs=70.3
Q ss_pred eeEeecCCCccchhhhccCC---C--eeEEEecCCCCCCchhHhhh----ccc---cccc-cccCCCCCCCC-----Ccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD---P--VWVMNVVPARKSSTLSVIYD----RGL---IGVY-HDWCEPFSTYP-----RTY 436 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~--VwvMnvvp~~~~ntl~vi~e----RGL---iG~~-hdwce~fstYP-----rty 436 (527)
++|||+|||.|.++.+|... . |..+-+- +..+.++-+ .|+ +-+. .|..+.+...+ .+|
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~----~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADGRVVTCEVD----AQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC----SHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECC----HHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 58999999999999888653 2 3333222 123333322 243 1111 11111111111 679
Q ss_pred chhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC------------HHHHHHHHH----HHhcCCcee
Q 009719 437 DLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS------------PEVIDKVSR----IANTVRWTA 500 (527)
Q Consensus 437 DLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~------------~~~~~~i~~----i~~~l~W~~ 500 (527)
|+|.++... -....++-++=|+|||||.+++.+. ......+++ +...-++++
T Consensus 147 D~v~~d~~~------------~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 214 (229)
T 2avd_A 147 DVAVVDADK------------ENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYI 214 (229)
T ss_dssp EEEEECSCS------------TTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEE
T ss_pred cEEEECCCH------------HHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEE
Confidence 999875321 2235678888899999999999642 112223333 344556776
Q ss_pred EEecCCCCCCCCceEEEEEec
Q 009719 501 AVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 501 ~~~~~e~~~~~~ekiLi~~K~ 521 (527)
..... .+.+++++|.
T Consensus 215 ~~lp~------~dGl~~~~k~ 229 (229)
T 2avd_A 215 SLLPL------GDGLTLAFKI 229 (229)
T ss_dssp EEECS------TTCEEEEEEC
T ss_pred EEEec------CCceEEEEEC
Confidence 66532 2568888884
No 389
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=96.35 E-value=0.00066 Score=68.41 Aligned_cols=93 Identities=16% Similarity=0.209 Sum_probs=61.0
Q ss_pred CeeeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhh-ccccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYD-RGLIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~e-RGLiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
...+|+|+|||.|.++.+|.+. .+.++-+ |. .+..+-+ .++-=+.+|..++ .|. ||+|.+..++-.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~----~~~~a~~~~~v~~~~~d~~~~---~p~-~D~v~~~~~lh~ 258 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQ----VVENLSGSNNLTYVGGDMFTS---IPN-ADAVLLKYILHN 258 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HH----HHTTCCCBTTEEEEECCTTTC---CCC-CSEEEEESCGGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HH----HHhhcccCCCcEEEeccccCC---CCC-ccEEEeehhhcc
Confidence 4579999999999999999643 2444443 31 1111111 1222233444443 454 999999999987
Q ss_pred ccCCCCCCCCCcccccceeecccccC---CcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRP---EGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP---~G~~iird 481 (527)
|.+ . ....+|-++-|+|+| ||.++|.|
T Consensus 259 ~~d-----~--~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 259 WTD-----K--DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp SCH-----H--HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred CCH-----H--HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 751 1 123789999999999 99999875
No 390
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=96.32 E-value=0.0032 Score=65.04 Aligned_cols=109 Identities=11% Similarity=0.089 Sum_probs=63.9
Q ss_pred hhccccccccCCe-eEEeeccCcChHHHHHHHHHc----CC---CcEEeeccccC-CCC---CCCcccEEEecCcc----
Q 009719 143 VASFGGSMLSENI-LTLSFAPRDSHKAQIQFALER----GI---PAFVAMLGTRR-LPF---PAFSFDIVHCSRCL---- 206 (527)
Q Consensus 143 vgsfga~Ll~r~V-~~msiAp~D~seaqvq~A~eR----g~---pa~~~v~dae~-LPF---pD~SFDlV~cs~~l---- 206 (527)
+|.++-++..++. .+..+ |.++.+++.|+++ ++ .+.+..+|+.. |+. ..++||+|++.--.
T Consensus 223 tG~~sl~la~~ga~~V~~v---D~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~ 299 (385)
T 2b78_A 223 TAAFSVAAAMGGAMATTSV---DLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARN 299 (385)
T ss_dssp TTHHHHHHHHTTBSEEEEE---ESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC---
T ss_pred cCHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCC
Confidence 6777777776554 22333 5566677766643 55 35677788654 442 25689999984211
Q ss_pred -ccccc---ChHHHHHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHh
Q 009719 207 -IPFTA---YNATYLIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARA 255 (527)
Q Consensus 207 -~hw~d---~~~~aL~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~ 255 (527)
.+..+ .-..++.++.++|+|||.++++..+.... ...-++.+.+.+..
T Consensus 300 ~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~-~~~~~~~i~~~~~~ 351 (385)
T 2b78_A 300 KKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT-VSQFKKQIEKGFGK 351 (385)
T ss_dssp --CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-HHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-HHHHHHHHHHHHHH
Confidence 11111 11226778899999999999988754432 11223444444443
No 391
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.28 E-value=0.00054 Score=64.30 Aligned_cols=87 Identities=18% Similarity=0.179 Sum_probs=52.0
Q ss_pred eeEeecCCCccchhhhccCC----------CeeEEEecCCCCCCchhHhhhc----c--------ccccccccCCCCCCC
Q 009719 375 RNIMDMNAFFGGFAAALTSD----------PVWVMNVVPARKSSTLSVIYDR----G--------LIGVYHDWCEPFSTY 432 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~----------~VwvMnvvp~~~~ntl~vi~eR----G--------LiG~~hdwce~fstY 432 (527)
..|||+|||.|.+++.|... .|..+-+.| ..+..+-++ | +-=+..|..+.++.
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~----~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 160 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQA----ELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP- 160 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCH----HHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCH----HHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-
Confidence 37999999999999988652 343333222 222322221 2 11122233333321
Q ss_pred CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 433 PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 433 PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..+||+|++...+. .++-++-|+|+|||.+++.-
T Consensus 161 ~~~fD~I~~~~~~~---------------~~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 161 NAPYNAIHVGAAAP---------------DTPTELINQLASGGRLIVPV 194 (227)
T ss_dssp GCSEEEEEECSCBS---------------SCCHHHHHTEEEEEEEEEEE
T ss_pred CCCccEEEECCchH---------------HHHHHHHHHhcCCCEEEEEE
Confidence 26899999865443 24567889999999999863
No 392
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=96.26 E-value=0.002 Score=63.40 Aligned_cols=77 Identities=8% Similarity=0.020 Sum_probs=53.4
Q ss_pred ccccccCCeeEEeeccCcChHHHHHHHHHcC---------CCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHH
Q 009719 147 GGSMLSENILTLSFAPRDSHKAQIQFALERG---------IPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 147 ga~Ll~r~V~~msiAp~D~seaqvq~A~eRg---------~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
+..++..+ ..+...|.++.+++.|+++- ..+.+..+|+.... ++||+|++.. .+... ++
T Consensus 87 ~~~ll~~~---~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~-----~dp~~-~~ 154 (262)
T 2cmg_A 87 AHQLFKYD---THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ-----EPDIH-RI 154 (262)
T ss_dssp HHHHTTSS---CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS-----CCCHH-HH
T ss_pred HHHHHhCC---CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC-----CChHH-HH
Confidence 33455553 24444577889999887642 12455667776544 8899999873 23444 89
Q ss_pred HHHhhcccCCcEEEEecC
Q 009719 218 IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~p 235 (527)
.++.|+|||||.+++...
T Consensus 155 ~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 155 DGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp HHHHTTEEEEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEcC
Confidence 999999999999999653
No 393
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.23 E-value=0.0015 Score=64.38 Aligned_cols=139 Identities=14% Similarity=0.055 Sum_probs=72.4
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc-----cc-----------cccc-cccCCCCCCCCCc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR-----GL-----------IGVY-HDWCEPFSTYPRT 435 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR-----GL-----------iG~~-hdwce~fstYPrt 435 (527)
-++|||+|||.|+++..|.+.+.- +|+-++-. .-+.++-++ |+ +-+. .|-.+.... +.+
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVD--EVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCS--EEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 368999999999999999776532 22222221 222222211 22 1111 111111112 578
Q ss_pred cchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEec--CCCC
Q 009719 436 YDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVHD--KEPG 508 (527)
Q Consensus 436 yDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~~--~e~~ 508 (527)
||+|-++.. ..+. ....--...++-++-|+|+|||.+++.. ..+.+..+.+..+..--.+.... ...+
T Consensus 153 fD~Ii~d~~-~~~~----~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~ 227 (281)
T 1mjf_A 153 FDVIIADST-DPVG----PAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGY 227 (281)
T ss_dssp EEEEEEECC-CCC---------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTS
T ss_pred eeEEEECCC-CCCC----cchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCC
Confidence 999998643 2221 0000011456788999999999999972 33444444444443323333221 1222
Q ss_pred CCCCceEEEEEec
Q 009719 509 SNGREKILVATKS 521 (527)
Q Consensus 509 ~~~~ekiLi~~K~ 521 (527)
.+...+++|.|+
T Consensus 228 -~g~~~~~~as~~ 239 (281)
T 1mjf_A 228 -ASPWAFLVGVKG 239 (281)
T ss_dssp -SSSEEEEEEEES
T ss_pred -CceEEEEEeeCC
Confidence 345678888886
No 394
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=96.23 E-value=0.00076 Score=64.55 Aligned_cols=127 Identities=12% Similarity=0.150 Sum_probs=70.3
Q ss_pred eeeEeecCCCccchhhhccC-----CCeeEEEecCCCCCCchhHh----hhccccc---cc-cccCCCCCCC------CC
Q 009719 374 IRNIMDMNAFFGGFAAALTS-----DPVWVMNVVPARKSSTLSVI----YDRGLIG---VY-HDWCEPFSTY------PR 434 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~-----~~VwvMnvvp~~~~ntl~vi----~eRGLiG---~~-hdwce~fstY------Pr 434 (527)
-++|||+|||.|..+.+|.. ..|..+-+-| ..+.++ -+.|+-. +. .|..+.++.. +.
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~----~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDR----EAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCH----HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCH----HHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 46899999999998877743 2233332211 222222 2235411 11 1222222222 46
Q ss_pred ccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC--------H---------HHHHHHHHH----H
Q 009719 435 TYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--------P---------EVIDKVSRI----A 493 (527)
Q Consensus 435 tyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--------~---------~~~~~i~~i----~ 493 (527)
+||+|-++.--. ....++-++-|+|||||.+++.+- . .....|+++ .
T Consensus 147 ~fD~I~~d~~~~------------~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~ 214 (237)
T 3c3y_A 147 SYDFGFVDADKP------------NYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLA 214 (237)
T ss_dssp CEEEEEECSCGG------------GHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred CcCEEEECCchH------------HHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHHHHHHHHHHHHHHh
Confidence 899997753222 235577778899999999999751 0 012333333 4
Q ss_pred hcCCceeEEecCCCCCCCCceEEEEEecc
Q 009719 494 NTVRWTAAVHDKEPGSNGREKILVATKSL 522 (527)
Q Consensus 494 ~~l~W~~~~~~~e~~~~~~ekiLi~~K~~ 522 (527)
..=+......-. .+.+++++|++
T Consensus 215 ~~~~~~~~~lp~------~dG~~~~~~~~ 237 (237)
T 3c3y_A 215 ADPRIEIVHLPL------GDGITFCRRLY 237 (237)
T ss_dssp HCTTEEEEEECS------TTCEEEEEECC
T ss_pred cCCCeEEEEEEe------CCceEEEEEcC
Confidence 444566555422 35689999863
No 395
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.22 E-value=0.00074 Score=62.98 Aligned_cols=90 Identities=12% Similarity=0.178 Sum_probs=51.3
Q ss_pred eeEeecCCCccchhhhccCC------C-eeEEEecCCCCCCchhHhhhc----cc-------cc-cccccCCCCC---CC
Q 009719 375 RNIMDMNAFFGGFAAALTSD------P-VWVMNVVPARKSSTLSVIYDR----GL-------IG-VYHDWCEPFS---TY 432 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~------~-VwvMnvvp~~~~ntl~vi~eR----GL-------iG-~~hdwce~fs---tY 432 (527)
.+|||+|||.|.+++.|... | .-|..|-.. +..+..+-++ |+ +- +..|..+.+. .-
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERV--KDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESC--HHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCC--HHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 48999999999999888542 1 222222211 1223333222 31 11 1122222110 11
Q ss_pred CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 433 PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 433 PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..+||+|++...+. .++-++-++|+|||.+++.-
T Consensus 160 ~~~fD~I~~~~~~~---------------~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 160 LGLFDAIHVGASAS---------------ELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HCCEEEEEECSBBS---------------SCCHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECCchH---------------HHHHHHHHhcCCCcEEEEEE
Confidence 26799998864443 35677889999999999874
No 396
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.21 E-value=0.0026 Score=63.04 Aligned_cols=154 Identities=12% Similarity=0.157 Sum_probs=86.2
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc---cc
Q 009719 349 ADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL---IG 420 (527)
Q Consensus 349 ~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL---iG 420 (527)
.+++.+.+.+-.+... . . -.+|+|+|||.|.++.+|...|-+ +|+-+|-. ..+.++-+ .|+ +-
T Consensus 106 ~~te~lv~~~l~~~~~-~----~--~~~vLDlG~GsG~~~~~la~~~~~--~v~~vDis~~al~~A~~n~~~~~l~~~v~ 176 (284)
T 1nv8_A 106 PETEELVELALELIRK-Y----G--IKTVADIGTGSGAIGVSVAKFSDA--IVFATDVSSKAVEIARKNAERHGVSDRFF 176 (284)
T ss_dssp TTHHHHHHHHHHHHHH-H----T--CCEEEEESCTTSHHHHHHHHHSSC--EEEEEESCHHHHHHHHHHHHHTTCTTSEE
T ss_pred hhHHHHHHHHHHHhcc-c----C--CCEEEEEeCchhHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceE
Confidence 4566666665544431 1 1 237999999999999988655322 22223322 34444333 244 22
Q ss_pred -cccccCCCCCCCCCcc---chhhhcCccccccC---CCC--C-----CCCCcccccceeec-ccccCCcEEEEeCCHHH
Q 009719 421 -VYHDWCEPFSTYPRTY---DLIHVSGIESLIKN---PGS--N-----KNSCSLVDLMVEMD-RMLRPEGTVVVRDSPEV 485 (527)
Q Consensus 421 -~~hdwce~fstYPrty---DLiHa~~~fs~~~~---~~~--~-----~~rC~~~~illEmD-RILRP~G~~iird~~~~ 485 (527)
+..||.+.+ +.+| |+|-++--+....+ +.. + ...++-..++-++= +.|+|||++++.-..+.
T Consensus 177 ~~~~D~~~~~---~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q 253 (284)
T 1nv8_A 177 VRKGEFLEPF---KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQ 253 (284)
T ss_dssp EEESSTTGGG---GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTC
T ss_pred EEECcchhhc---ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchH
Confidence 234565544 3578 99988633322110 000 0 00112225677788 99999999999765555
Q ss_pred HHHHHHHHhcCCceeEEecCCCCCCCCceEEEEEec
Q 009719 486 IDKVSRIANTVRWTAAVHDKEPGSNGREKILVATKS 521 (527)
Q Consensus 486 ~~~i~~i~~~l~W~~~~~~~e~~~~~~ekiLi~~K~ 521 (527)
-+.+.++++.. ....|. .+.+++++++++
T Consensus 254 ~~~v~~~~~~~---~~~~D~----~g~~R~~~~~~k 282 (284)
T 1nv8_A 254 VEELKKIVSDT---VFLKDS----AGKYRFLLLNRR 282 (284)
T ss_dssp HHHHTTTSTTC---EEEECT----TSSEEEEEEECC
T ss_pred HHHHHHHHHhC---Ceeccc----CCCceEEEEEEc
Confidence 56677776654 222232 246788888875
No 397
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.20 E-value=0.0022 Score=63.86 Aligned_cols=143 Identities=10% Similarity=0.062 Sum_probs=72.6
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc------cc----cccc-cccCCCCCCCCCccchhh
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR------GL----IGVY-HDWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR------GL----iG~~-hdwce~fstYPrtyDLiH 440 (527)
-++|||+|||.|+++.++.+. ++.- |+-++-. .-+.++-++ |+ +-+. .|..+.....+.+||+|-
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~--v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEK--AILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSE--EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCE--EEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 378999999999999999876 4322 2222221 222222221 11 1111 121111222357899998
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEec--CCCCCCCCc
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVHD--KEPGSNGRE 513 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~~--~e~~~~~~e 513 (527)
++. +..+..+ ...-....++-++-|+|+|||.+++.. ..+.+..+.+.+++.--.+.... ....+.+..
T Consensus 169 ~d~-~~~~~~~---~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~ 244 (296)
T 1inl_A 169 IDS-TDPTAGQ---GGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMW 244 (296)
T ss_dssp EEC--------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEE
T ss_pred EcC-CCcccCc---hhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCce
Confidence 752 2221100 000011467788999999999999973 22333333333333322333321 222334556
Q ss_pred eEEEEEecc
Q 009719 514 KILVATKSL 522 (527)
Q Consensus 514 kiLi~~K~~ 522 (527)
.+++|.|++
T Consensus 245 ~f~~as~~~ 253 (296)
T 1inl_A 245 SYTFASKGI 253 (296)
T ss_dssp EEEEEESSC
T ss_pred EEEEecCCC
Confidence 788999874
No 398
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.19 E-value=0.00083 Score=67.85 Aligned_cols=111 Identities=14% Similarity=0.104 Sum_probs=63.1
Q ss_pred eeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhh----ccccccccccCCCCCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYD----RGLIGVYHDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~e----RGLiG~~hdwce~fstYPrtyDLiHa~~~fs 446 (527)
.+|+|+|||.|.++.+|... .|..+-+-+ .-+..+-+ .|+-..++ +...++.-+.+||+|-++..|.
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~----~~l~~a~~~~~~~~~~~~~~-~~d~~~~~~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSA----PAVEASRATLAANGVEGEVF-ASNVFSEVKGRFDMIISNPPFH 272 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBH----HHHHHHHHHHHHTTCCCEEE-ECSTTTTCCSCEEEEEECCCCC
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEEECCH----HHHHHHHHHHHHhCCCCEEE-EccccccccCCeeEEEECCCcc
Confidence 37999999999999888543 233322211 22222222 23321111 2223332358999999987775
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeCC--HHHHHHHHHHHh
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--PEVIDKVSRIAN 494 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--~~~~~~i~~i~~ 494 (527)
... ..+.-....++-|+-|+|+|||.+++-.. ...-..++++..
T Consensus 273 ~g~----~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~ 318 (343)
T 2pjd_A 273 DGM----QTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFG 318 (343)
T ss_dssp SSS----HHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHS
T ss_pred cCc----cCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcC
Confidence 210 00011246789999999999999998743 223334444444
No 399
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=96.17 E-value=0.0082 Score=60.04 Aligned_cols=145 Identities=15% Similarity=0.063 Sum_probs=73.1
Q ss_pred CCeeeEeecCCCccchhhhccCC-CeeEEEecCCCCCCchhHhhhc------------cccccccccCCCCCCCCCccch
Q 009719 372 PAIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKSSTLSVIYDR------------GLIGVYHDWCEPFSTYPRTYDL 438 (527)
Q Consensus 372 ~~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~ntl~vi~eR------------GLiG~~hdwce~fstYPrtyDL 438 (527)
..-++|||+|||.|+++..|.+. ++.-+-.|=.+. .-+.++-++ .+-=+..|..+.....+.+||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~-~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDA-GVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCT-THHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 34679999999999999988776 443222222222 222322221 0101122333333333578999
Q ss_pred hhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEe--cCCCCCCC
Q 009719 439 IHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVH--DKEPGSNG 511 (527)
Q Consensus 439 iHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~--~~e~~~~~ 511 (527)
|-++. +..+. .........++-++-|+|+|||.+++.. ..+.+..+.+.+++.--.+... .....+.+
T Consensus 161 Ii~D~-~~p~~----~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g 235 (294)
T 3adn_A 161 IISDC-TDPIG----PGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGG 235 (294)
T ss_dssp EEECC---------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSS
T ss_pred EEECC-CCccC----cchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCC
Confidence 98853 22221 1111112567778999999999999963 2233333333333222222221 22233334
Q ss_pred CceEEEEEecc
Q 009719 512 REKILVATKSL 522 (527)
Q Consensus 512 ~ekiLi~~K~~ 522 (527)
.-.+++|.|++
T Consensus 236 ~~~f~~as~~~ 246 (294)
T 3adn_A 236 IMTFAWATDND 246 (294)
T ss_dssp EEEEEEEESCT
T ss_pred ceEEEEEeCCc
Confidence 55688888865
No 400
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.16 E-value=0.00061 Score=70.44 Aligned_cols=112 Identities=11% Similarity=0.083 Sum_probs=62.3
Q ss_pred eeEeecCCCccchhhhccCC--C--eeEEEecCCCCCCchhH----hhhccccc---cccccCCCCCCCC-Cccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--P--VWVMNVVPARKSSTLSV----IYDRGLIG---VYHDWCEPFSTYP-RTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~--VwvMnvvp~~~~ntl~v----i~eRGLiG---~~hdwce~fstYP-rtyDLiHa~ 442 (527)
.+|||+|||.|.|+.+|... . |.-+-+-+ ..+.. +-..|+-. +--.+...+..+| .+||+|-++
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~----~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~n 299 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESP----MAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCN 299 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCH----HHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEEC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcH----HHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEEC
Confidence 68999999999999888654 2 33332221 22222 22233311 1001122233334 689999998
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC--CHHHHHHHHHHHh
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD--SPEVIDKVSRIAN 494 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird--~~~~~~~i~~i~~ 494 (527)
-.|.... ...+-....++-++-|+|+|||.+++-. ...+-..++++..
T Consensus 300 ppfh~~~----~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 300 PPFHQQH----ALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp CCC-----------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS
T ss_pred CCcccCc----ccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC
Confidence 7775321 0011122357889999999999999964 3334455555544
No 401
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.14 E-value=0.0016 Score=64.27 Aligned_cols=88 Identities=11% Similarity=0.064 Sum_probs=56.0
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHcC-----C----------CcEEeeccccC-CCCCCCcccEEEecCccc
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALERG-----I----------PAFVAMLGTRR-LPFPAFSFDIVHCSRCLI 207 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg-----~----------pa~~~v~dae~-LPFpD~SFDlV~cs~~l~ 207 (527)
|.++..++.++.. .+...|.++.+++.|+++- + .+.+..+|+.. |+. +++||+|++....
T Consensus 87 G~~~~~l~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD~Ii~d~~~- 162 (281)
T 1mjf_A 87 GGTVREVLQHDVD--EVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFDVIIADSTD- 162 (281)
T ss_dssp SHHHHHHTTSCCS--EEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCEEEEEEECCC-
T ss_pred CHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCeeEEEECCCC-
Confidence 3444455555321 3334477788999988753 1 24556667543 444 7899999987542
Q ss_pred ccccC----hHHHHHHHhhcccCCcEEEEecC
Q 009719 208 PFTAY----NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 208 hw~d~----~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
|+... ...++.++.|+|||||.+++...
T Consensus 163 ~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 163 PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 43221 13489999999999999999653
No 402
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.13 E-value=0.00033 Score=62.70 Aligned_cols=96 Identities=19% Similarity=0.209 Sum_probs=53.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhh----hccc---cccc-cccCCCCCCC---CCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIY----DRGL---IGVY-HDWCEPFSTY---PRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~----eRGL---iG~~-hdwce~fstY---PrtyDLiHa~ 442 (527)
.+|||+|||.|.++.++...+.. +|+-+|.. ..+..+- ..|+ +-++ .|+.+..... +.+||+|-++
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGMD--KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEeCCccCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 48999999999998877555421 12222222 2222222 2233 1111 2333321111 4689999887
Q ss_pred CccccccCCCCCCCCCcccccceee--cccccCCcEEEEeCC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEM--DRMLRPEGTVVVRDS 482 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEm--DRILRP~G~~iird~ 482 (527)
..|..- ....++-++ -|+|+|||.+++...
T Consensus 124 ~~~~~~----------~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 124 PPYAKQ----------EIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp CCGGGC----------CHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCCch----------hHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 665411 123445455 899999999999743
No 403
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.13 E-value=0.0026 Score=61.61 Aligned_cols=105 Identities=13% Similarity=0.132 Sum_probs=66.2
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc----cc---c-ccccccCCCCCCCC-Cccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR----GL---I-GVYHDWCEPFSTYP-RTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR----GL---i-G~~hdwce~fstYP-rtyDLiHa 441 (527)
.+|||+|||.|.++.+|.+. ..- |+-.+.. ..+..+-++ |+ + -...|..+. +| .+||+|-+
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~D~V~~ 187 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSGK---VFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG---FDEKDVDALFL 187 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTCE---EEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC---CSCCSEEEEEE
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCcE---EEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc---ccCCccCEEEE
Confidence 37999999999999888544 232 3333332 445554443 43 1 123344443 34 67999876
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-HHHHHHHHHHHhcCCce
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-PEVIDKVSRIANTVRWT 499 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-~~~~~~i~~i~~~l~W~ 499 (527)
+- . ....+|-++-|+|+|||.+++... .+.+.++.+.++...|.
T Consensus 188 ~~-----~---------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 188 DV-----P---------DPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFI 232 (277)
T ss_dssp CC-----S---------CGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEE
T ss_pred CC-----c---------CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 31 0 124688889999999999999865 44566666666666665
No 404
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.12 E-value=0.0016 Score=62.96 Aligned_cols=92 Identities=13% Similarity=0.204 Sum_probs=52.8
Q ss_pred eeeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHh----hhccc---cccc-cccCCCCCCC------CC
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVI----YDRGL---IGVY-HDWCEPFSTY------PR 434 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi----~eRGL---iG~~-hdwce~fstY------Pr 434 (527)
-++|||+|||.|.++..|... .|..+-+-| ..+.++ -+.|+ |-+. .|..+..+.. +.
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~----~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINK----ENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHG 155 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCC----HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTT
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCH----HHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCC
Confidence 368999999999998877432 233332221 222222 22344 1111 1222211222 47
Q ss_pred ccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 435 TYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 435 tyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+||+|-++.... ....++-++-|+|||||.+++.+
T Consensus 156 ~fD~V~~d~~~~------------~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 156 SYDFIFVDADKD------------NYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp CBSEEEECSCST------------THHHHHHHHHHHBCTTCCEEEEC
T ss_pred CEEEEEEcCchH------------HHHHHHHHHHHhCCCCeEEEEec
Confidence 899997653211 23567778889999999999975
No 405
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.10 E-value=0.00085 Score=61.90 Aligned_cols=88 Identities=15% Similarity=0.117 Sum_probs=53.0
Q ss_pred eeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhc----cc--cc-cccccCCCCCCCCCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDR----GL--IG-VYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eR----GL--iG-~~hdwce~fstYPrtyDLiHa~ 442 (527)
.+|||+|||.|.+++.|... .|..+-+- ++.+..+-++ |+ +- ...|..+.+. -+.+||+|.+.
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~----~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~ 153 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERI----PELAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTT 153 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESC----HHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEES
T ss_pred CEEEEECCCccHHHHHHHHHhCCCCEEEEEeCC----HHHHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEEC
Confidence 48999999999999888543 23333221 1334444333 32 11 1122222222 13689999988
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
..+... .-++-|+|+|||.+++.-.
T Consensus 154 ~~~~~~---------------~~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 154 AAGPKI---------------PEPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp SBBSSC---------------CHHHHHTEEEEEEEEEEES
T ss_pred CchHHH---------------HHHHHHHcCCCcEEEEEEC
Confidence 666533 2378899999999998743
No 406
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.08 E-value=0.0022 Score=64.17 Aligned_cols=91 Identities=11% Similarity=0.089 Sum_probs=49.5
Q ss_pred eeEeecCCCccchhhhccCC--C-eeEEEecCCCCCCchhHhhhc----c----------c---cc-cccccCCCCCCCC
Q 009719 375 RNIMDMNAFFGGFAAALTSD--P-VWVMNVVPARKSSTLSVIYDR----G----------L---IG-VYHDWCEPFSTYP 433 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~-VwvMnvvp~~~~ntl~vi~eR----G----------L---iG-~~hdwce~fstYP 433 (527)
.+|||+|||.|.++.+|... + .-|..+=.. +..+..+-++ | + +- ...|..+....++
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVR--KDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESS--HHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCC--HHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 48999999999999888543 2 223222111 1222322221 1 1 11 1223333222234
Q ss_pred -CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 434 -RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 434 -rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
.+||+|.++. ... ..++-++-|+|+|||.+++..
T Consensus 185 ~~~fD~V~~~~-~~~-------------~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 185 SLTFDAVALDM-LNP-------------HVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp ---EEEEEECS-SST-------------TTTHHHHGGGEEEEEEEEEEE
T ss_pred CCCeeEEEECC-CCH-------------HHHHHHHHHhcCCCcEEEEEe
Confidence 5799998742 111 237788999999999999865
No 407
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=96.07 E-value=0.0011 Score=68.86 Aligned_cols=111 Identities=15% Similarity=0.146 Sum_probs=65.0
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc-cccc-cccCCCCCCCC-CccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL-IGVY-HDWCEPFSTYP-RTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL-iG~~-hdwce~fstYP-rtyDLiHa~~~fs 446 (527)
.+|+|+|||.|.++.+|.+... .|+-+|.. ..+..+-+ .|+ +-++ .|..+ +. .+ .+||+|-++-.|.
T Consensus 235 ~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~-~~-~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 235 RQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDE-AL-TEEARFDIIVTNPPFH 309 (381)
T ss_dssp CEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT-TS-CTTCCEEEEEECCCCC
T ss_pred CEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhh-cc-ccCCCeEEEEECCchh
Confidence 4899999999999999977654 33333322 33332222 232 2222 22222 11 23 6999999987776
Q ss_pred cccCCCCCCCCCcccccceeecccccCCcEEEEeCCH--HHHHHHHHHHh
Q 009719 447 LIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP--EVIDKVSRIAN 494 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~--~~~~~i~~i~~ 494 (527)
... ....-....++-++-|+|+|||.++|.... .+-..+++...
T Consensus 310 ~~~----~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~ 355 (381)
T 3dmg_A 310 VGG----AVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFG 355 (381)
T ss_dssp TTC----SSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHS
T ss_pred hcc----cccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhc
Confidence 321 001112356888999999999999997432 23344555443
No 408
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.07 E-value=0.0021 Score=59.88 Aligned_cols=68 Identities=16% Similarity=0.150 Sum_probs=45.8
Q ss_pred cChHHHHHHHHHc----CC--CcEEeeccccCC-C-CCC----CcccEEEecCcccccccChHHHHHHHhhcccCCcEEE
Q 009719 164 DSHKAQIQFALER----GI--PAFVAMLGTRRL-P-FPA----FSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLV 231 (527)
Q Consensus 164 D~seaqvq~A~eR----g~--pa~~~v~dae~L-P-FpD----~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lv 231 (527)
|.++.+++.|+++ |. .+.+..+|+... + +++ ++||+|++.... .....++.++.|+|||||.++
T Consensus 101 D~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~~----~~~~~~l~~~~~~L~pgG~lv 176 (229)
T 2avd_A 101 EVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADK----ENCSAYYERCLQLLRPGGILA 176 (229)
T ss_dssp ESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSCS----TTHHHHHHHHHHHEEEEEEEE
T ss_pred ECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCCH----HHHHHHHHHHHHHcCCCeEEE
Confidence 5566777777654 54 355666665332 2 222 789999986542 222348999999999999999
Q ss_pred EecC
Q 009719 232 ISGP 235 (527)
Q Consensus 232 iS~p 235 (527)
+...
T Consensus 177 ~~~~ 180 (229)
T 2avd_A 177 VLRV 180 (229)
T ss_dssp EECC
T ss_pred EECC
Confidence 9653
No 409
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=96.06 E-value=0.0008 Score=62.34 Aligned_cols=121 Identities=15% Similarity=0.117 Sum_probs=63.3
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCCCchhHh--------hhcccc--ccccccCCCCCCCCCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKSSTLSVI--------YDRGLI--GVYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~ntl~vi--------~eRGLi--G~~hdwce~fstYPrtyDLiHa~ 442 (527)
..|||+|||.|.++.+|... ..-|.-|=.. +..|..+ -.+|+- -..+.=.+.++....+ |.+...
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s--~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSRLVVALDAD--KSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTEEEEEEESC--GGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEE
Confidence 57999999999999998665 3333333221 1333321 134432 1111111223322244 666521
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC------------------CHHH-HHHHHHHHhcCCceeEE
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD------------------SPEV-IDKVSRIANTVRWTAAV 502 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird------------------~~~~-~~~i~~i~~~l~W~~~~ 502 (527)
-.+.... ..+-=+...+|-|+-|+|||||.+++.. ..+. .+.++.++..--|++..
T Consensus 106 ~~~~~~~----~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 106 MPWGSLL----RGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp SCCHHHH----HHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred ccchhhh----hhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 1111000 0000011678899999999999999952 1222 33477777777887654
No 410
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=96.06 E-value=0.0079 Score=60.52 Aligned_cols=54 Identities=13% Similarity=0.023 Sum_probs=40.3
Q ss_pred cEE-eeccccCCCCCCCcccEEEecCcccccc-----cC------hHHHHHHHhhcccCCcEEEEecC
Q 009719 180 AFV-AMLGTRRLPFPAFSFDIVHCSRCLIPFT-----AY------NATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 180 a~~-~v~dae~LPFpD~SFDlV~cs~~l~hw~-----d~------~~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+.+ .++|...++++ ++||+|+|... .++. +. -..+|.|+.|+|||||.|++...
T Consensus 107 v~~~i~gD~~~~~~~-~~fD~Vvsn~~-~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 107 ADSTLIGDCATVHTA-NKWDLIISDMY-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp SSEEEESCGGGCCCS-SCEEEEEECCC-CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEEECccccCCcc-CcccEEEEcCC-ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 456 78899888886 78999998643 2221 11 12489999999999999999765
No 411
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=96.05 E-value=0.0029 Score=61.95 Aligned_cols=100 Identities=14% Similarity=0.126 Sum_probs=59.9
Q ss_pred cCCCCeeeEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhcc-ccccccccCCCCC--CCCCccchhh
Q 009719 369 LGTPAIRNIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDRG-LIGVYHDWCEPFS--TYPRTYDLIH 440 (527)
Q Consensus 369 i~~~~iRnvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eRG-LiG~~hdwce~fs--tYPrtyDLiH 440 (527)
|+.|. .|||.|||.|.|+..|.+. .|....+-|.-...-...+-+++ +.-+..|-+.+-. .-+.++|+|.
T Consensus 75 ikpG~--~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf 152 (233)
T 4df3_A 75 VKEGD--RILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLY 152 (233)
T ss_dssp CCTTC--EEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCC--EEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEE
Confidence 56664 7999999999999998542 36665554431111122333444 3344444443311 1236788876
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
++-.+. + ....++.|+-|+|+|||.++|..
T Consensus 153 ~d~~~~-~----------~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 153 ADVAQP-E----------QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp ECCCCT-T----------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeccCC-h----------hHHHHHHHHHHhccCCCEEEEEE
Confidence 542111 1 23567889999999999999863
No 412
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.04 E-value=0.0016 Score=68.28 Aligned_cols=47 Identities=19% Similarity=0.209 Sum_probs=36.4
Q ss_pred cCCCCCCCcccEEEecCcccccccChHHH---------------------------------------HHHHhhcccCCc
Q 009719 188 RRLPFPAFSFDIVHCSRCLIPFTAYNATY---------------------------------------LIEVDRLLRPGG 228 (527)
Q Consensus 188 e~LPFpD~SFDlV~cs~~l~hw~d~~~~a---------------------------------------L~Ei~RVLRPGG 228 (527)
..-.||++|||+|+++.+| ||..+.... |+-..|+|+|||
T Consensus 141 y~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG 219 (384)
T 2efj_A 141 YSRLFPEESMHFLHSCYCL-HWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRG 219 (384)
T ss_dssp TSCCSCTTCEEEEEEESCT-TBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred hhccCCCCceEEEEeccee-eecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 4578999999999999997 885432111 444489999999
Q ss_pred EEEEecC
Q 009719 229 YLVISGP 235 (527)
Q Consensus 229 ~lviS~p 235 (527)
+++++..
T Consensus 220 ~mvl~~~ 226 (384)
T 2efj_A 220 RMLLTFI 226 (384)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9999875
No 413
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=96.01 E-value=0.0057 Score=60.28 Aligned_cols=144 Identities=15% Similarity=0.156 Sum_probs=75.9
Q ss_pred CeeeEeecCCCccchhhhccCC-CeeEEEecCCCCCCchhHhhhc------cc----ccccc-ccCCCCCCCCCccchhh
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKSSTLSVIYDR------GL----IGVYH-DWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~ntl~vi~eR------GL----iG~~h-dwce~fstYPrtyDLiH 440 (527)
.-++|||+|||.|+++..+.+. ++--+-+|=.+ +.-+.++-+. |+ +-+.+ |-.+.....+.+||+|-
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid-~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDID-GKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESC-HHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECC-HHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 4579999999999999998876 44222222111 1222222111 11 11111 11111122357899999
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEec--CCCCCCCCc
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVHD--KEPGSNGRE 513 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~~--~e~~~~~~e 513 (527)
++.. ..+. ....--...++-++-|+|+|||.+++.. ..+.+..+.+.+++.=-.+.... ....+.+..
T Consensus 154 ~d~~-~~~~----~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w 228 (275)
T 1iy9_A 154 VDST-EPVG----PAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLW 228 (275)
T ss_dssp ESCS-SCCS----CCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCE
T ss_pred ECCC-CCCC----cchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcce
Confidence 8633 2221 0111112467788999999999999973 23444555444444433333321 222223445
Q ss_pred eEEEEEecc
Q 009719 514 KILVATKSL 522 (527)
Q Consensus 514 kiLi~~K~~ 522 (527)
.+++|.|++
T Consensus 229 ~~~~ask~~ 237 (275)
T 1iy9_A 229 TFTIGSKKY 237 (275)
T ss_dssp EEEEEESSC
T ss_pred EEEEeeCCC
Confidence 788888864
No 414
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=95.94 E-value=0.0029 Score=62.57 Aligned_cols=83 Identities=13% Similarity=0.107 Sum_probs=54.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC----C--CcEEeeccccCCCCCCCcccEEEecCcccccccChHH-
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG----I--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNAT- 215 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg----~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~- 215 (527)
.|.++..|+.++..+..+ |.++.+++.|+++. . ...+..+|+..++++ +||+|+++... ||..+.-.
T Consensus 39 ~G~lt~~L~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~nlpy-~~~~~~~~~ 112 (285)
T 1zq9_A 39 TGNMTVKLLEKAKKVVAC---ELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVANLPY-QISSPFVFK 112 (285)
T ss_dssp TSTTHHHHHHHSSEEEEE---ESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEECCG-GGHHHHHHH
T ss_pred ccHHHHHHHhhCCEEEEE---ECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEecCc-ccchHHHHH
Confidence 455666666665433333 67788998888752 2 356778899888887 79999997542 44322111
Q ss_pred HH--------------HHHh--hcccCCcEEE
Q 009719 216 YL--------------IEVD--RLLRPGGYLV 231 (527)
Q Consensus 216 aL--------------~Ei~--RVLRPGG~lv 231 (527)
.| +|+. |+|||||.++
T Consensus 113 ~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 113 LLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp HHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred HHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 11 4553 7999999874
No 415
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=95.93 E-value=0.0056 Score=61.56 Aligned_cols=90 Identities=9% Similarity=-0.066 Sum_probs=52.2
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHH-H-cCCC-cEEeec-cccCCCCCCCcccEEEecCccc--cc-ccChH
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFAL-E-RGIP-AFVAML-GTRRLPFPAFSFDIVHCSRCLI--PF-TAYNA 214 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~-e-Rg~p-a~~~v~-dae~LPFpD~SFDlV~cs~~l~--hw-~d~~~ 214 (527)
.|.|+.+|..+ .|+++++.... +..+++.+. + .+.+ +.+.++ |+..+| +++||+|+|..+.+ |+ .+...
T Consensus 93 ~G~~s~~la~~~~V~gvD~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~~~~g~~~~d~~~ 169 (305)
T 2p41_A 93 RGGWSYYCGGLKNVREVKGLTKG-GPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDIGESSPNPTVEAGR 169 (305)
T ss_dssp TSHHHHHHHTSTTEEEEEEECCC-STTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEEECCCCCCSSHHHHHHH
T ss_pred CCHHHHHHHhcCCEEEEeccccC-chhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEEECCccccCcchhhHHH
Confidence 56676677665 36666661110 011111111 1 1223 345556 666554 67999999976542 22 22221
Q ss_pred --HHHHHHhhcccCCcEEEEecC
Q 009719 215 --TYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 215 --~aL~Ei~RVLRPGG~lviS~p 235 (527)
.+|.++.|+|||||.|++...
T Consensus 170 ~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 170 TLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEES
T ss_pred HHHHHHHHHHHhCCCCEEEEEeC
Confidence 389999999999999999654
No 416
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=95.92 E-value=0.0019 Score=66.49 Aligned_cols=94 Identities=16% Similarity=0.007 Sum_probs=60.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCC-C---CCCcccEEEecCcccc----
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLP-F---PAFSFDIVHCSRCLIP---- 208 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LP-F---pD~SFDlV~cs~~l~h---- 208 (527)
+|.|+-++...+.. .+...|.++.+++.|+++ ++ .+.+..+|+..+. . .+++||+|++.--..+
T Consensus 228 ~G~~~~~la~~g~~--~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~ 305 (396)
T 2as0_A 228 TGGFAIHAAIAGAD--EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEK 305 (396)
T ss_dssp TTHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGG
T ss_pred CCHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHH
Confidence 67777777766531 222336777888877654 55 3567778875542 2 3689999998532111
Q ss_pred ----cccChHHHHHHHhhcccCCcEEEEecCCCC
Q 009719 209 ----FTAYNATYLIEVDRLLRPGGYLVISGPPVQ 238 (527)
Q Consensus 209 ----w~d~~~~aL~Ei~RVLRPGG~lviS~pp~~ 238 (527)
.......++.++.++|||||++++++....
T Consensus 306 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 306 DLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp GHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 111223488999999999999999886443
No 417
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=95.90 E-value=0.002 Score=57.84 Aligned_cols=84 Identities=14% Similarity=0.250 Sum_probs=53.5
Q ss_pred CCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHH----------HHHHHHHHHhcCCceeEE
Q 009719 433 PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPE----------VIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 433 PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~----------~~~~i~~i~~~l~W~~~~ 502 (527)
+.+||+|.+..++.... -+...+|-|+-|+|||||++++.+... ..+++.+.++.--+ +.+
T Consensus 61 ~~~fD~V~~~~~l~~~~--------~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~ 131 (176)
T 2ld4_A 61 ESSFDIILSGLVPGSTT--------LHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEV 131 (176)
T ss_dssp SSCEEEEEECCSTTCCC--------CCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEE
T ss_pred CCCEeEEEECChhhhcc--------cCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEe
Confidence 47999999987776441 134789999999999999999964211 14566666554444 333
Q ss_pred ecCCCCCCC------------------CceEEEEEeccCCC
Q 009719 503 HDKEPGSNG------------------REKILVATKSLWKL 525 (527)
Q Consensus 503 ~~~e~~~~~------------------~ekiLi~~K~~w~~ 525 (527)
.+....+.. .--+++++|+-|..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~Kp~~~~ 172 (176)
T 2ld4_A 132 KELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEV 172 (176)
T ss_dssp EEEEEECCCHHHHHHHHHHTCCCCSSEEEEEEEEECCCSSC
T ss_pred ecCcccCCCHHHHHHHHHHhcccCCceEEEEEeccCCcccc
Confidence 321111111 13478899998865
No 418
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=95.90 E-value=0.0096 Score=68.28 Aligned_cols=97 Identities=12% Similarity=0.161 Sum_probs=60.8
Q ss_pred eeeEeecCCCccchhhhccCCC---eeEEEecCCCCC-CchhHhhh----------ccc--cccccccCCCCCCCCCccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDP---VWVMNVVPARKS-STLSVIYD----------RGL--IGVYHDWCEPFSTYPRTYD 437 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~---VwvMnvvp~~~~-ntl~vi~e----------RGL--iG~~hdwce~fstYPrtyD 437 (527)
-..|||+|||.|.++.+|.... .-|.-| |-. ..+..+-+ .|+ |-.++.=-+.++....+||
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGV---DIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFD 798 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGV---DISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVD 798 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEE---ESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEE---ECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCee
Confidence 3579999999999999997764 233332 322 44444433 244 2222111122333348999
Q ss_pred hhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 438 LIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+|.+..++.++. + =....++-|+-|+|||| .+||..
T Consensus 799 lVV~~eVLeHL~------d-p~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 799 IGTCLEVIEHME------E-DQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEEEESCGGGSC------H-HHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEEEeCchhhCC------h-HHHHHHHHHHHHHcCCC-EEEEEe
Confidence 999999988764 1 11234778999999999 777764
No 419
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=95.89 E-value=0.0023 Score=65.96 Aligned_cols=122 Identities=15% Similarity=0.196 Sum_probs=62.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc-cc---cc-cccCCCCCCC---CCccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL-IG---VY-HDWCEPFSTY---PRTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL-iG---~~-hdwce~fstY---PrtyDLiHa 441 (527)
.+|||++||.|+|+.++..... -.|+-+|.. ..+..+-+ .|+ -+ ++ .|..+..... ..+||+|.+
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~--~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGC--SQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeeccCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 5799999999999988876532 012222222 22222221 133 11 11 1111111111 357999988
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH------HHHHHHHHHHhcCCc
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------EVIDKVSRIANTVRW 498 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~------~~~~~i~~i~~~l~W 498 (527)
+--+............-.+..++.++=++|+|||.+++.... +..+.+++.+.....
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 362 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGR 362 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCC
Confidence 643211100000011134467888899999999999997421 234445555544443
No 420
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=95.89 E-value=0.0018 Score=66.57 Aligned_cols=93 Identities=17% Similarity=0.094 Sum_probs=60.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccCCCC----CCCcccEEEecCccccc----
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRRLPF----PAFSFDIVHCSRCLIPF---- 209 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~LPF----pD~SFDlV~cs~~l~hw---- 209 (527)
+|.++-++.... ..+...|.++.+++.|+++ ++. +.+..+|+..+.. .+++||+|++.--....
T Consensus 220 ~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~ 296 (382)
T 1wxx_A 220 AGGFALHLALGF---REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKD 296 (382)
T ss_dssp TTHHHHHHHHHE---EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTS
T ss_pred cCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCChhH
Confidence 566666666552 2344447788888888764 554 5677788755422 26899999985311111
Q ss_pred ----ccChHHHHHHHhhcccCCcEEEEecCCCC
Q 009719 210 ----TAYNATYLIEVDRLLRPGGYLVISGPPVQ 238 (527)
Q Consensus 210 ----~d~~~~aL~Ei~RVLRPGG~lviS~pp~~ 238 (527)
......++.++.++|+|||+|+++..+..
T Consensus 297 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 297 VERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 11223489999999999999999987544
No 421
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=95.86 E-value=0.0012 Score=62.36 Aligned_cols=85 Identities=20% Similarity=0.311 Sum_probs=51.4
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCCCchhHhhhc----cccc---cccccCCCCCCCC-C-ccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKSSTLSVIYDR----GLIG---VYHDWCEPFSTYP-R-TYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~ntl~vi~eR----GLiG---~~hdwce~fstYP-r-tyDLiHa~ 442 (527)
.+|||+|||.|.+++.|.+. .|..+-+.| ..+..+-++ |+-. ...|..+ .+| . .||+|.++
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~----~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~~~~~fD~Ii~~ 165 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIVKTDVYTIERIP----ELVEFAKRNLERAGVKNVHVILGDGSK---GFPPKAPYDVIIVT 165 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHHCSCEEEEESCH----HHHHHHHHHHHHTTCCSEEEEESCGGG---CCGGGCCEEEEEEC
T ss_pred CEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCH----HHHHHHHHHHHHcCCCCcEEEECCccc---CCCCCCCccEEEEC
Confidence 48999999999999988553 344433222 333333332 3311 1122222 233 3 49999987
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
..+..+ .-++-|+|+|||.+++.-
T Consensus 166 ~~~~~~---------------~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 166 AGAPKI---------------PEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp SBBSSC---------------CHHHHHTEEEEEEEEEEE
T ss_pred CcHHHH---------------HHHHHHhcCCCcEEEEEE
Confidence 655432 237789999999999874
No 422
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=95.86 E-value=0.003 Score=64.22 Aligned_cols=140 Identities=14% Similarity=0.097 Sum_probs=83.9
Q ss_pred ccCCCCeeeEeecCCCccchhhhccCC-CeeEEEecCCCCCCchhHhhh---cccc----ccccccCCCCCCCCCccchh
Q 009719 368 KLGTPAIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKSSTLSVIYD---RGLI----GVYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 368 ~i~~~~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~ntl~vi~e---RGLi----G~~hdwce~fstYPrtyDLi 439 (527)
.+..+..+.|+|+|||.|.++.+|.++ |=... +=.|-|..+..+-+ .+.. =+-||. |..-+..+|++
T Consensus 174 ~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~--~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~---~~~~~~~~D~~ 248 (353)
T 4a6d_A 174 AFDLSVFPLMCDLGGGAGALAKECMSLYPGCKI--TVFDIPEVVWTAKQHFSFQEEEQIDFQEGDF---FKDPLPEADLY 248 (353)
T ss_dssp SSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEE--EEEECHHHHHHHHHHSCC--CCSEEEEESCT---TTSCCCCCSEE
T ss_pred hcCcccCCeEEeeCCCCCHHHHHHHHhCCCcee--EeccCHHHHHHHHHhhhhcccCceeeecCcc---ccCCCCCceEE
Confidence 456778899999999999999999543 31111 11122333332221 1111 112332 22223468999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC--------H------H------------HHHHHHHHH
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS--------P------E------------VIDKVSRIA 493 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~--------~------~------------~~~~i~~i~ 493 (527)
...+++-.|.+ + ....||-++=|.|+|||.++|-|. . + ..++.++++
T Consensus 249 ~~~~vlh~~~d-----~--~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll 321 (353)
T 4a6d_A 249 ILARVLHDWAD-----G--KCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLL 321 (353)
T ss_dssp EEESSGGGSCH-----H--HHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHH
T ss_pred EeeeecccCCH-----H--HHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHH
Confidence 99999988851 1 124688999999999999998751 0 0 134567777
Q ss_pred hcCCceeEEecCCCCCCCCceEEEEEecc
Q 009719 494 NTVRWTAAVHDKEPGSNGREKILVATKSL 522 (527)
Q Consensus 494 ~~l~W~~~~~~~e~~~~~~ekiLi~~K~~ 522 (527)
++--|+....-.- + ....+++|+|.-
T Consensus 322 ~~AGf~~v~v~~~-~--~~~~~i~ArKgt 347 (353)
T 4a6d_A 322 SSAGFRDFQFKKT-G--AIYDAILARKGT 347 (353)
T ss_dssp HHHTCEEEEEECC-S--SSCEEEEEECCC
T ss_pred HHCCCceEEEEEc-C--CceEEEEEEecC
Confidence 7777775433221 2 234689999963
No 423
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=95.82 E-value=0.0021 Score=58.12 Aligned_cols=44 Identities=18% Similarity=0.181 Sum_probs=32.4
Q ss_pred CCCCcccEEEecCccc---cc-ccCh------HHHHHHHhhcccCCcEEEEecC
Q 009719 192 FPAFSFDIVHCSRCLI---PF-TAYN------ATYLIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 192 FpD~SFDlV~cs~~l~---hw-~d~~------~~aL~Ei~RVLRPGG~lviS~p 235 (527)
+++++||+|+|..+.+ |+ .+.. ..++.++.|+|||||+|++...
T Consensus 93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 5577999999965432 22 2221 2489999999999999999864
No 424
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=95.82 E-value=0.0026 Score=67.85 Aligned_cols=94 Identities=14% Similarity=0.122 Sum_probs=58.5
Q ss_pred cChHHHHHHHHHc----CCC-cEEeeccccCCC-CCCCcccEEEecC------cccc-------cccC--------hHHH
Q 009719 164 DSHKAQIQFALER----GIP-AFVAMLGTRRLP-FPAFSFDIVHCSR------CLIP-------FTAY--------NATY 216 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p-a~~~v~dae~LP-FpD~SFDlV~cs~------~l~h-------w~d~--------~~~a 216 (527)
|.++.+++.++++ |+. +.+..+|+..++ +.+++||+|++.- .+.+ |... ...+
T Consensus 137 Dis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~i 216 (456)
T 3m4x_A 137 EIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEI 216 (456)
T ss_dssp CSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHH
Confidence 6777787777643 665 456667877775 4578999999631 1111 1111 1147
Q ss_pred HHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEE
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYEL 260 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~ 260 (527)
|.++.++|||||+|++|+-......+. +.++.+.+..-+++
T Consensus 217 L~~a~~~LkpGG~LvYsTCs~~~eEne---~vv~~~l~~~~~~l 257 (456)
T 3m4x_A 217 LSSAIKMLKNKGQLIYSTCTFAPEENE---EIISWLVENYPVTI 257 (456)
T ss_dssp HHHHHHTEEEEEEEEEEESCCCGGGTH---HHHHHHHHHSSEEE
T ss_pred HHHHHHhcCCCcEEEEEEeecccccCH---HHHHHHHHhCCCEE
Confidence 999999999999999998754433222 23444555433433
No 425
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=95.82 E-value=0.0031 Score=60.25 Aligned_cols=67 Identities=15% Similarity=0.176 Sum_probs=47.3
Q ss_pred cChHHHHHHHHHc----CCC--cEEeeccccC-CC-C-----CCCcccEEEecCcccccccChHHHHHHHhhcccCCcEE
Q 009719 164 DSHKAQIQFALER----GIP--AFVAMLGTRR-LP-F-----PAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYL 230 (527)
Q Consensus 164 D~seaqvq~A~eR----g~p--a~~~v~dae~-LP-F-----pD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~l 230 (527)
|.++.+++.|+++ |+. +.+.++|+.. +| + ++++||+|++... ......++.++.|+|||||++
T Consensus 102 D~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~~----~~~~~~~l~~~~~~L~pGG~l 177 (237)
T 3c3y_A 102 DFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDAD----KPNYIKYHERLMKLVKVGGIV 177 (237)
T ss_dssp ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEE
T ss_pred ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECCc----hHHHHHHHHHHHHhcCCCeEE
Confidence 6677888888653 553 4566677643 34 2 3689999998632 222334899999999999999
Q ss_pred EEec
Q 009719 231 VISG 234 (527)
Q Consensus 231 viS~ 234 (527)
++..
T Consensus 178 v~d~ 181 (237)
T 3c3y_A 178 AYDN 181 (237)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9965
No 426
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=95.81 E-value=0.0096 Score=58.91 Aligned_cols=87 Identities=16% Similarity=0.187 Sum_probs=55.9
Q ss_pred hhccccccccC-CeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcc---cEEEec---------
Q 009719 143 VASFGGSMLSE-NILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSF---DIVHCS--------- 203 (527)
Q Consensus 143 vgsfga~Ll~r-~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SF---DlV~cs--------- 203 (527)
.|.++..|... +..+ ...|.++.+++.|+++ ++. +.+..+|... +++ ++| |+|+|+
T Consensus 134 sG~~~~~la~~~~~~v---~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnPPyi~~~~~ 208 (284)
T 1nv8_A 134 SGAIGVSVAKFSDAIV---FATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSNPPYVKSSAH 208 (284)
T ss_dssp TSHHHHHHHHHSSCEE---EEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEECCCCBCGGGS
T ss_pred hhHHHHHHHHCCCCEE---EEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEcCCCCCcccc
Confidence 34444445544 3333 3337788899888764 553 5677777655 333 589 999996
Q ss_pred ---Cccccccc-------ChHHHHHHHh-hcccCCcEEEEecC
Q 009719 204 ---RCLIPFTA-------YNATYLIEVD-RLLRPGGYLVISGP 235 (527)
Q Consensus 204 ---~~l~hw~d-------~~~~aL~Ei~-RVLRPGG~lviS~p 235 (527)
.+. |.+. +...+++++. ++|+|||+|++..+
T Consensus 209 l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 209 LPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp CTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred cChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 222 2211 1114899999 99999999999765
No 427
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=95.81 E-value=0.0021 Score=63.04 Aligned_cols=108 Identities=15% Similarity=0.186 Sum_probs=62.1
Q ss_pred eeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhh----hccc---cccccccCCCCCCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIY----DRGL---IGVYHDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~----eRGL---iG~~hdwce~fstYPrtyDLiHa~~ 443 (527)
.+|+|+|||.|+|+..|... .|..+-+.| ..+..+- ..|+ .=+..|..+ ++ .+.+||+|-++.
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~----~av~~a~~n~~~n~l~~~~~~~~d~~~-~~-~~~~~D~Vi~d~ 194 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNP----TAYHYLCENIKLNKLNNVIPILADNRD-VE-LKDVADRVIMGY 194 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCH----HHHHHHHHHHHHTTCSSEEEEESCGGG-CC-CTTCEEEEEECC
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCH----HHHHHHHHHHHHcCCCCEEEEECChHH-cC-ccCCceEEEECC
Confidence 57999999999999887554 344333322 2222221 1233 111112222 21 256899986642
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH------HHH-HHHHHHHhcCCceeE
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP------EVI-DKVSRIANTVRWTAA 501 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~------~~~-~~i~~i~~~l~W~~~ 501 (527)
.. ....++.++-|+|+|||.+++.+.. +.. +.++.+.+.+.+++.
T Consensus 195 p~-------------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 195 VH-------------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp CS-------------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred cc-------------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 21 4567888989999999999998532 233 334555555555544
No 428
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=95.79 E-value=0.00098 Score=67.29 Aligned_cols=93 Identities=14% Similarity=0.228 Sum_probs=59.8
Q ss_pred CeeeEeecCCCccchhhhccCC--C--eeEEEecCCCCCCchhHhhh-ccccccccccCCCCCCCCCccchhhhcCcccc
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD--P--VWVMNVVPARKSSTLSVIYD-RGLIGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~--~--VwvMnvvp~~~~ntl~vi~e-RGLiG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
...+|+|+|||.|.++.+|.+. . +.++-. | ..+..+-+ .++--+-+|..++ +| .||++.+..++-.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~---~~-~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-P----QVVGNLTGNENLNFVGGDMFKS---IP-SADAVLLKWVLHD 263 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-H----HHHSSCCCCSSEEEEECCTTTC---CC-CCSEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-H----HHHhhcccCCCcEEEeCccCCC---CC-CceEEEEcccccC
Confidence 4579999999999999998543 2 333332 2 11111111 1222233444443 45 4999999999987
Q ss_pred ccCCCCCCCCCcccccceeecccccC---CcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRP---EGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP---~G~~iird 481 (527)
|.+ . ....+|-++-|+|+| ||.++|-|
T Consensus 264 ~~d-----~--~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 264 WND-----E--QSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp SCH-----H--HHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred CCH-----H--HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 751 1 123789999999999 99999864
No 429
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=95.78 E-value=0.0035 Score=60.21 Aligned_cols=106 Identities=13% Similarity=0.173 Sum_probs=61.9
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc-----c-ccc----cccccCCCCCCC-CCccchh
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR-----G-LIG----VYHDWCEPFSTY-PRTYDLI 439 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR-----G-LiG----~~hdwce~fstY-PrtyDLi 439 (527)
.+|||+|||.|.++.+|... ..-| +-.|-. ..+..+-++ | +.. +..|..+. + + +.+||+|
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~~~~~v---~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~-~-~~~~~~D~v 175 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPAGQV---ISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS-E-LPDGSVDRA 175 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEE---EEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC-C-CCTTCEEEE
T ss_pred CEEEEEcccccHHHHHHHHHhCCCCEE---EEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc-C-CCCCceeEE
Confidence 37999999999999988653 2322 223332 444444333 3 211 12233332 1 2 3689998
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhc-CCce
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANT-VRWT 499 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~-l~W~ 499 (527)
-++. - ....+|-++-|+|+|||.+++.. ..+.+.++.+.++. ..|.
T Consensus 176 ~~~~-~-------------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 176 VLDM-L-------------APWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp EEES-S-------------CGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred EECC-c-------------CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 7631 1 22468999999999999999975 33444444443333 4443
No 430
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=95.77 E-value=0.0057 Score=62.98 Aligned_cols=95 Identities=15% Similarity=0.092 Sum_probs=62.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC---CcEEeeccccCC-C-C--CCCcccEEEecCcc-----
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI---PAFVAMLGTRRL-P-F--PAFSFDIVHCSRCL----- 206 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~---pa~~~v~dae~L-P-F--pD~SFDlV~cs~~l----- 206 (527)
+|.|+-++...+.. .+...|.++.+++.|+++ |+ .+.+..+|+..+ + + .+++||+|++.--.
T Consensus 231 ~G~~sl~la~~g~~--~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~ 308 (396)
T 3c0k_A 231 TGGFAVSALMGGCS--QVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENK 308 (396)
T ss_dssp TCSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCS
T ss_pred CCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCCh
Confidence 67777777777531 233337778888887654 56 356777886554 2 1 25789999986311
Q ss_pred ---cccccChHHHHHHHhhcccCCcEEEEecCCCCC
Q 009719 207 ---IPFTAYNATYLIEVDRLLRPGGYLVISGPPVQW 239 (527)
Q Consensus 207 ---~hw~d~~~~aL~Ei~RVLRPGG~lviS~pp~~~ 239 (527)
.+.......++.++.++|+|||.++++..+...
T Consensus 309 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 344 (396)
T 3c0k_A 309 SQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLM 344 (396)
T ss_dssp SSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTC
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 111122234899999999999999998875443
No 431
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=95.77 E-value=0.0017 Score=65.21 Aligned_cols=122 Identities=16% Similarity=0.107 Sum_probs=62.9
Q ss_pred eeEeecCCCccchhhhccCC--C-eeEEEecCCCCC-CchhHhhhc----ccc--ccc-cccCCCCCCCCCccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSD--P-VWVMNVVPARKS-STLSVIYDR----GLI--GVY-HDWCEPFSTYPRTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~-VwvMnvvp~~~~-ntl~vi~eR----GLi--G~~-hdwce~fstYPrtyDLiHa~~ 443 (527)
..|||+|||.|+++.+|... + --| +-.|.. ..+..+-++ |+- -+. .|.. .++.++.+||+|-++-
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~~v---~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~-~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDGVI---YAFDVDENRLRETRLNLSRLGVLNVILFHSSSL-HIGELNVEFDKILLDA 195 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCSEE---EEECSCHHHHHHHHHHHHHHTCCSEEEESSCGG-GGGGGCCCEEEEEEEC
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEE---EEEcCCHHHHHHHHHHHHHhCCCeEEEEECChh-hcccccccCCEEEEeC
Confidence 47999999999998888542 1 222 223332 344444333 441 111 2221 2222456899998753
Q ss_pred ccccc----cCCCCCCCC--Cc-------ccccceeecccccCCcEEEEeC----CHHHHHHHHHHHhcCCcee
Q 009719 444 IESLI----KNPGSNKNS--CS-------LVDLMVEMDRMLRPEGTVVVRD----SPEVIDKVSRIANTVRWTA 500 (527)
Q Consensus 444 ~fs~~----~~~~~~~~r--C~-------~~~illEmDRILRP~G~~iird----~~~~~~~i~~i~~~l~W~~ 500 (527)
-.|.. ..|...... -. -..+|-++-|+|+|||.+++.. ..+.-..|+.+++...++.
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~ 269 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVEL 269 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEE
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEE
Confidence 32211 000000000 00 0367888999999999999963 1222233555555544443
No 432
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=95.75 E-value=0.0024 Score=60.91 Aligned_cols=50 Identities=10% Similarity=0.053 Sum_probs=31.3
Q ss_pred CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCH
Q 009719 434 RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSP 483 (527)
Q Consensus 434 rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~ 483 (527)
.+||+|-|+-.|........+...-....++-++-|+|+|||++++.+..
T Consensus 167 ~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 167 SAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp CCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred CCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 48999998766543220000000112336788899999999999996543
No 433
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=95.74 E-value=0.002 Score=65.57 Aligned_cols=122 Identities=13% Similarity=0.051 Sum_probs=65.2
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----ccc----cccc-ccCCCCCCC---CCccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLI----GVYH-DWCEPFSTY---PRTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLi----G~~h-dwce~fstY---PrtyDLiHa 441 (527)
..|||++||.|+|+.++..... .|+-+|.. ..+..+-++ |+- -+++ |..+..... ..+||+|=+
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 4799999999999988876654 44444543 444433322 331 1111 111100001 357999877
Q ss_pred cCc-cccccCCCCC--CCCCcccccceeecccccCCcEEEEeC------CH-HHHHHHHHHHhcCCceeE
Q 009719 442 SGI-ESLIKNPGSN--KNSCSLVDLMVEMDRMLRPEGTVVVRD------SP-EVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 442 ~~~-fs~~~~~~~~--~~rC~~~~illEmDRILRP~G~~iird------~~-~~~~~i~~i~~~l~W~~~ 501 (527)
+-- |..-. ..+ ...=.+..++-++-|+|+|||++++.. +. ...+.+++.++....++.
T Consensus 232 dPP~~~~~~--~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 232 DPPKFGRGT--HGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCCSEEECT--TCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred CCccccCCc--hHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 432 22100 000 000013467888899999999977753 22 234445556666666554
No 434
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=95.67 E-value=0.0014 Score=60.95 Aligned_cols=97 Identities=10% Similarity=-0.019 Sum_probs=54.6
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc--cccc-cccCCCCCCCCCccchhhhcCccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL--IGVY-HDWCEPFSTYPRTYDLIHVSGIES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL--iG~~-hdwce~fstYPrtyDLiHa~~~fs 446 (527)
.+|||+|||.|.++..+.....- .|+-+|.. ..+..+-+ .|+ +-++ .|..+..+.-+.+||+|=++..|.
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~--~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAA--GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CeEEEeCCCcCHHHHHHHhcCCC--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 47999999999998875444321 33444433 33443322 233 1111 222221222346899998765533
Q ss_pred cccCCCCCCCCCcccccceee--cccccCCcEEEEeCCH
Q 009719 447 LIKNPGSNKNSCSLVDLMVEM--DRMLRPEGTVVVRDSP 483 (527)
Q Consensus 447 ~~~~~~~~~~rC~~~~illEm--DRILRP~G~~iird~~ 483 (527)
. =....++-++ -|+|+|||.+++....
T Consensus 134 ~----------~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 134 R----------GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp T----------TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred C----------CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 1 0124455555 4579999999998654
No 435
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=95.65 E-value=0.0016 Score=63.99 Aligned_cols=94 Identities=12% Similarity=0.122 Sum_probs=56.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCC--CCchhHhhhc---------cc-------c-ccccccCCCCCCC---
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARK--SSTLSVIYDR---------GL-------I-GVYHDWCEPFSTY--- 432 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~--~ntl~vi~eR---------GL-------i-G~~hdwce~fstY--- 432 (527)
.+|||+|||.|.++.+|...... .|+-+|- +..+..+-++ |+ + -...+|.+.....
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~--~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGAD--QVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCS--EEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CeEEEecccccHHHHHHHHcCCC--EEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 48999999999998887655421 2222333 1333333221 22 2 1225677653322
Q ss_pred --CCccchhhhcCccccccCCCCCCCCCcccccceeeccccc---C--CcEEEE
Q 009719 433 --PRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLR---P--EGTVVV 479 (527)
Q Consensus 433 --PrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILR---P--~G~~ii 479 (527)
+.+||+|-+..++-.. -....++-++.|+|+ | ||.+++
T Consensus 159 ~~~~~fD~Ii~~dvl~~~---------~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFH---------QAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HSCSSBSEEEEESCCSCG---------GGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred ccCCCCCEEEEeCcccCh---------HHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 4789999876655422 124678899999999 9 996544
No 436
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=95.59 E-value=0.012 Score=59.27 Aligned_cols=132 Identities=12% Similarity=0.121 Sum_probs=70.1
Q ss_pred eeEeecCC------Cccc-hhhhccC--CCeeEEEecCCCCCCchhHhhhccccc-cccccCCCCCCCCCccchhhhcCc
Q 009719 375 RNIMDMNA------FFGG-FAAALTS--DPVWVMNVVPARKSSTLSVIYDRGLIG-VYHDWCEPFSTYPRTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~a------g~Gg-FaAaL~~--~~VwvMnvvp~~~~ntl~vi~eRGLiG-~~hdwce~fstYPrtyDLiHa~~~ 444 (527)
..|||+|| |.|+ .+|.+.. -.|.-+-+-|. + + ++-= +..|+.+. + ++.+||+|.++..
T Consensus 65 ~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-----v----~-~v~~~i~gD~~~~-~-~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-----V----S-DADSTLIGDCATV-H-TANKWDLIISDMY 132 (290)
T ss_dssp CEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-----B----C-SSSEEEESCGGGC-C-CSSCEEEEEECCC
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-----C----C-CCEEEEECccccC-C-ccCcccEEEEcCC
Confidence 46999999 5576 3333443 23444444443 1 1 2222 34455442 2 3578999998632
Q ss_pred ccc--ccCCCCCCCCCcccccceeecccccCCcEEEEeC-CHHHHHHHHHHHhcCCc-eeEEecCCCCCCCCceEEEEEe
Q 009719 445 ESL--IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-SPEVIDKVSRIANTVRW-TAAVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 445 fs~--~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-~~~~~~~i~~i~~~l~W-~~~~~~~e~~~~~~ekiLi~~K 520 (527)
... ..........-.+..++-|+-|+|||||.+++.. ......++.++++...+ .+...- ......|.+|+++.
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~a--sr~~s~e~~lv~~~ 210 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTN--VNASSSEAFLIGAN 210 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEG--GGTTSSCEEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEE--cCCCchheEEecCC
Confidence 211 0000000111112367888999999999999954 11122356666666634 444441 22233688888875
No 437
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=95.58 E-value=0.003 Score=63.06 Aligned_cols=142 Identities=15% Similarity=0.124 Sum_probs=74.1
Q ss_pred CeeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc------cc----ccc-ccccCCCCCC-CCCccch
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR------GL----IGV-YHDWCEPFST-YPRTYDL 438 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR------GL----iG~-~hdwce~fst-YPrtyDL 438 (527)
.-++|||+|||.|+++..|.+. ++--+ +-++-. .-+.++-++ ++ +-+ ..|..+.... -+.+||+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v--~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHC--DLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEE--EEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEE--EEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 3478999999999999999766 33221 111211 222222221 11 111 1122111111 2578999
Q ss_pred hhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-----HHHHHHHHHHHhcCCce-eEEec--CCCCCC
Q 009719 439 IHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-----PEVIDKVSRIANTVRWT-AAVHD--KEPGSN 510 (527)
Q Consensus 439 iHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-----~~~~~~i~~i~~~l~W~-~~~~~--~e~~~~ 510 (527)
|-++....... ...---..++-++-|+|+|||.+++... ......+.+.++..-+. +.... ....+.
T Consensus 173 Ii~d~~~~~~~-----~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~ 247 (304)
T 3bwc_A 173 VIIDTTDPAGP-----ASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPC 247 (304)
T ss_dssp EEEECC--------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTT
T ss_pred EEECCCCcccc-----chhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccC
Confidence 99864332110 0111114677899999999999999632 23455566655555443 33321 223334
Q ss_pred CCceEEEEEec
Q 009719 511 GREKILVATKS 521 (527)
Q Consensus 511 ~~ekiLi~~K~ 521 (527)
+.-.+++|.|+
T Consensus 248 g~w~f~~as~~ 258 (304)
T 3bwc_A 248 GSIGTLVCSKK 258 (304)
T ss_dssp SCCEEEEEESS
T ss_pred cceEEEEEeCC
Confidence 55678888886
No 438
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=95.58 E-value=0.0077 Score=62.55 Aligned_cols=47 Identities=21% Similarity=0.291 Sum_probs=37.7
Q ss_pred cCCCCCCCcccEEEecCcccccccChH---------------------------------HHHHHHhhcccCCcEEEEec
Q 009719 188 RRLPFPAFSFDIVHCSRCLIPFTAYNA---------------------------------TYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 188 e~LPFpD~SFDlV~cs~~l~hw~d~~~---------------------------------~aL~Ei~RVLRPGG~lviS~ 234 (527)
....||++|||+|+++.+| ||..... .+|+-..|.|+|||+++++.
T Consensus 131 y~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSL-MWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSCCSCTTCBSCEEEESCT-TBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhccCCCCceEEEEehhhh-hhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 4578999999999999997 8854311 13777899999999999976
Q ss_pred C
Q 009719 235 P 235 (527)
Q Consensus 235 p 235 (527)
.
T Consensus 210 ~ 210 (359)
T 1m6e_X 210 L 210 (359)
T ss_dssp E
T ss_pred e
Confidence 4
No 439
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=95.54 E-value=0.0042 Score=63.39 Aligned_cols=101 Identities=16% Similarity=0.181 Sum_probs=56.8
Q ss_pred CeeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc------cc----cc-cccccCCCCCCCC-Cccch
Q 009719 373 AIRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR------GL----IG-VYHDWCEPFSTYP-RTYDL 438 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR------GL----iG-~~hdwce~fstYP-rtyDL 438 (527)
.-++|||+|||.|+++..|... ++.- |+-++-. .-+.++-++ |+ +- +..|..+.+..++ .+||+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~--V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQ--IDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCE--EEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCE--EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 4579999999999999999876 3332 2222222 223332221 32 11 1223222222233 78999
Q ss_pred hhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 439 IHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 439 iHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
|-++.. ..+. ....-....++-++-|+|+|||.+++.
T Consensus 198 Ii~d~~-~p~~----~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 198 VIVDSS-DPIG----PAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEECCC-CTTS----GGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCC-CccC----cchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 988532 2111 001000246778999999999999997
No 440
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=95.53 E-value=0.0085 Score=60.51 Aligned_cols=137 Identities=18% Similarity=0.146 Sum_probs=71.7
Q ss_pred CCCCeeeEeecCCCccchhhhccC-----CCeeEEEecCCCCCCchhHhh----hccc--ccccc-ccCCCCCCCCCccc
Q 009719 370 GTPAIRNIMDMNAFFGGFAAALTS-----DPVWVMNVVPARKSSTLSVIY----DRGL--IGVYH-DWCEPFSTYPRTYD 437 (527)
Q Consensus 370 ~~~~iRnvmDm~ag~GgFaAaL~~-----~~VwvMnvvp~~~~ntl~vi~----eRGL--iG~~h-dwce~fstYPrtyD 437 (527)
.+..-..|+|.+||.|+|+..+.. ..|+-.-+-| ..+..+- ..|+ |-+.+ |.. .++.....||
T Consensus 200 ~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~----~~i~~a~~n~~~~g~~~i~~~~~D~~-~~~~~~~~~D 274 (354)
T 3tma_A 200 DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDE----KRLGLAREAALASGLSWIRFLRADAR-HLPRFFPEVD 274 (354)
T ss_dssp TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCH----HHHHHHHHHHHHTTCTTCEEEECCGG-GGGGTCCCCS
T ss_pred CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCH----HHHHHHHHHHHHcCCCceEEEeCChh-hCccccCCCC
Confidence 333446899999999999765533 3343332221 2232222 2343 22221 211 1222235689
Q ss_pred hhhhcCccccccCCCCCCCCCc----ccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEEe-cCCCCCCCC
Q 009719 438 LIHVSGIESLIKNPGSNKNSCS----LVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVH-DKEPGSNGR 512 (527)
Q Consensus 438 LiHa~~~fs~~~~~~~~~~rC~----~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~~-~~e~~~~~~ 512 (527)
+|-++--|..-. .+.-. ...++-++-|+|+|||.+++-..... .++++.+ ..|+.... ...+|.. .
T Consensus 275 ~Ii~npPyg~r~-----~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~--~~~~~~~-~g~~~~~~~~l~~g~l-~ 345 (354)
T 3tma_A 275 RILANPPHGLRL-----GRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPA--LLKRALP-PGFALRHARVVEQGGV-Y 345 (354)
T ss_dssp EEEECCCSCC---------CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHH--HHHHHCC-TTEEEEEEEECCBTTB-C
T ss_pred EEEECCCCcCcc-----CCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHH--HHHHHhh-cCcEEEEEEEEEeCCE-E
Confidence 999865443211 00011 14678899999999999988754332 2445555 67765433 2223332 2
Q ss_pred ceEEEEEe
Q 009719 513 EKILVATK 520 (527)
Q Consensus 513 ekiLi~~K 520 (527)
-.|++++|
T Consensus 346 ~~i~vl~r 353 (354)
T 3tma_A 346 PRVFVLEK 353 (354)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEc
Confidence 45676665
No 441
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=95.53 E-value=0.004 Score=61.98 Aligned_cols=53 Identities=17% Similarity=0.362 Sum_probs=38.5
Q ss_pred ccccCC-CCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 422 YHDWCE-PFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 422 ~hdwce-~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
.||+.+ +|+ .+..||+|-|..++..+. .=....++-++-+.|+|||++++...
T Consensus 200 ~~dl~~~~~~-~~~~fDlI~crnvliyf~-------~~~~~~vl~~~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 200 SVNLLEKQYN-VPGPFDAIFCRNVMIYFD-------KTTQEDILRRFVPLLKPDGLLFAGHS 253 (274)
T ss_dssp ECCTTCSSCC-CCCCEEEEEECSSGGGSC-------HHHHHHHHHHHGGGEEEEEEEEECTT
T ss_pred ecccCCCCCC-cCCCeeEEEECCchHhCC-------HHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 467766 243 136899999988876553 11125789999999999999999654
No 442
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=95.51 E-value=0.0067 Score=59.62 Aligned_cols=100 Identities=12% Similarity=0.079 Sum_probs=58.7
Q ss_pred CCeeeEeecCCCc---cchhhhccC--CCeeEEEecCCCC-CCchhHhhhc----cccc-cccccCCC-----C----CC
Q 009719 372 PAIRNIMDMNAFF---GGFAAALTS--DPVWVMNVVPARK-SSTLSVIYDR----GLIG-VYHDWCEP-----F----ST 431 (527)
Q Consensus 372 ~~iRnvmDm~ag~---GgFaAaL~~--~~VwvMnvvp~~~-~ntl~vi~eR----GLiG-~~hdwce~-----f----st 431 (527)
..++.|||+|||. |.++..+.. ... .|+=+|. +..|..+-++ +-+- +..|..+. . .+
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~---~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVNPDA---RVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHCTTC---EEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhCCCC---EEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhcc
Confidence 4579999999999 988655532 122 1222222 2333332222 1110 11122110 0 12
Q ss_pred CC-CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 432 YP-RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 432 YP-rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+| .+||+|=+..+|-.+. +. ....+|-|+-|+|+|||++++.+
T Consensus 153 ~d~~~~d~v~~~~vlh~~~------d~-~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLS------PD-VVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp CCTTSCCEEEETTTGGGSC------TT-THHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCCCEEEEEechhhhCC------cH-HHHHHHHHHHHhCCCCcEEEEEE
Confidence 33 4789988887777654 22 56789999999999999999985
No 443
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=95.44 E-value=0.0047 Score=64.35 Aligned_cols=115 Identities=16% Similarity=0.146 Sum_probs=65.5
Q ss_pred HHHHHHHHHhhh--ccCCCCeeeEeecCCCccchh---hhccCCCeeEEEecCCCCCCchhHhhhccc---cccccccCC
Q 009719 356 RRVAYYKNTLNV--KLGTPAIRNIMDMNAFFGGFA---AALTSDPVWVMNVVPARKSSTLSVIYDRGL---IGVYHDWCE 427 (527)
Q Consensus 356 ~~v~~Y~~~l~~--~i~~~~iRnvmDm~ag~GgFa---AaL~~~~VwvMnvvp~~~~ntl~vi~eRGL---iG~~hdwce 427 (527)
.|...|.+.|.. .+..++ .|||+|||+|-++ |..-.+.|..+-.-|. ......++-+.|| |=+++.--|
T Consensus 66 ~Rt~aY~~Ai~~~~~~~~~k--~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~-~~~a~~~~~~n~~~~~i~~i~~~~~ 142 (376)
T 4hc4_A 66 VRTDAYRLGILRNWAALRGK--TVLDVGAGTGILSIFCAQAGARRVYAVEASAI-WQQAREVVRFNGLEDRVHVLPGPVE 142 (376)
T ss_dssp HHHHHHHHHHHTTHHHHTTC--EEEEETCTTSHHHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHHHHhCHHhcCCC--EEEEeCCCccHHHHHHHHhCCCEEEEEeChHH-HHHHHHHHHHcCCCceEEEEeeeee
Confidence 455668776632 122343 6999999999764 3333455665543221 1123345566676 444443333
Q ss_pred CCCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEe
Q 009719 428 PFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 428 ~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iir 480 (527)
-+. .|.-+|+|=+.-+.+... .--.+..++-..||.|+|||.+|-+
T Consensus 143 ~~~-lpe~~DvivsE~~~~~l~------~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 143 TVE-LPEQVDAIVSEWMGYGLL------HESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TCC-CSSCEEEEECCCCBTTBT------TTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred eec-CCccccEEEeeccccccc------ccchhhhHHHHHHhhCCCCceECCc
Confidence 332 477799875532221111 1223567888899999999998865
No 444
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=95.42 E-value=0.082 Score=48.17 Aligned_cols=105 Identities=9% Similarity=-0.030 Sum_probs=65.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCccccccc-ChHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTA-YNATYL 217 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d-~~~~aL 217 (527)
.|.++..|..++.. .+...|.++.+++.|+++ ++.+.+..+|+..+| ++||+|++.-.++++.. ....++
T Consensus 60 ~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l 134 (207)
T 1wy7_A 60 TGVLSYGALLLGAK--EVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQRKHADRPFL 134 (207)
T ss_dssp TCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSSSSTTTTHHHH
T ss_pred CCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCccccCCchHHHH
Confidence 45555556555432 233337788899988875 335677788888875 48999999877655542 223489
Q ss_pred HHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEE
Q 009719 218 IEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYEL 260 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~ 260 (527)
.++.|+| ||.+++..++ ....+.+.+..+...|+.
T Consensus 135 ~~~~~~l--~~~~~~~~~~------~~~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 135 LKAFEIS--DVVYSIHLAK------PEVRRFIEKFSWEHGFVV 169 (207)
T ss_dssp HHHHHHC--SEEEEEEECC------HHHHHHHHHHHHHTTEEE
T ss_pred HHHHHhc--CcEEEEEeCC------cCCHHHHHHHHHHCCCeE
Confidence 9999999 6666555321 122334455555555554
No 445
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=95.40 E-value=0.0055 Score=61.91 Aligned_cols=142 Identities=17% Similarity=0.143 Sum_probs=74.1
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc------cc----cc-cccccCCCCCCCCCccchhh
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR------GL----IG-VYHDWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR------GL----iG-~~hdwce~fstYPrtyDLiH 440 (527)
-++|||+|||.|+++.++.+. +..- |+-+|-. .-+.++-++ |+ +- +..|..+.....+.+||+|-
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~--v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVEN--IDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCE--EEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCE--EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 378999999999999999876 3332 2222221 223332221 11 11 11222221112357899998
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEec--CCCCCCCCc
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVHD--KEPGSNGRE 513 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~~--~e~~~~~~e 513 (527)
++. +..+. ......-..++-++-|+|+|||.+++.. ..+.+..+.+.++..--.+.... ....+.+.-
T Consensus 195 ~d~-~~p~~----~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w 269 (321)
T 2pt6_A 195 VDS-SDPIG----PAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCI 269 (321)
T ss_dssp EEC-CCSSS----GGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEE
T ss_pred ECC-cCCCC----cchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceE
Confidence 763 22221 0000001467778999999999999963 23444454444444433443321 222222334
Q ss_pred eEEEEEecc
Q 009719 514 KILVATKSL 522 (527)
Q Consensus 514 kiLi~~K~~ 522 (527)
.+++|.|++
T Consensus 270 ~f~~as~~~ 278 (321)
T 2pt6_A 270 GILCCSKTD 278 (321)
T ss_dssp EEEEEESST
T ss_pred EEEEeeCCC
Confidence 577888864
No 446
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=95.36 E-value=0.0094 Score=54.50 Aligned_cols=114 Identities=10% Similarity=0.092 Sum_probs=66.2
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc-cccccccCCCCCCCCCccchhhhcCccccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL-IGVYHDWCEPFSTYPRTYDLIHVSGIESLI 448 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL-iG~~hdwce~fstYPrtyDLiHa~~~fs~~ 448 (527)
.+|||+|||.|.|+.+|...+.- +|+-.|.. ..+..+-++ |+ +-+. +..+..+|.+||+|-++--|...
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~---~~d~~~~~~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAK--EVICVEVDKEAVDVLIENLGEFKGKFKVF---IGDVSEFNSRVDIVIMNPPFGSQ 125 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHTGGGTTSEEEE---ESCGGGCCCCCSEEEECCCCSSS
T ss_pred CEEEEeeCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCEEEE---ECchHHcCCCCCEEEEcCCCccc
Confidence 58999999999999988665321 12222222 333333222 32 1111 22223356799999998776644
Q ss_pred cCCCCCCCCCcccccceeecccccCCcEEEEe-CCHHHHHHHHHHHhcCCceeEE
Q 009719 449 KNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVR-DSPEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 449 ~~~~~~~~rC~~~~illEmDRILRP~G~~iir-d~~~~~~~i~~i~~~l~W~~~~ 502 (527)
. .. ....++-++-|+| ||.+++. ...+..+.+.+++....|++..
T Consensus 126 ~------~~-~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 126 R------KH-ADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp S------TT-TTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEE
T ss_pred c------CC-chHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEE
Confidence 2 11 1234566677777 5555444 2666777788887777776653
No 447
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=95.29 E-value=0.0058 Score=58.84 Aligned_cols=76 Identities=14% Similarity=0.136 Sum_probs=48.7
Q ss_pred CeeEEeeccCcChHHHHHHHHHcCCC--cEEeeccccC-CCCC-----CCcccEEEecCcccccccChHHHHHHHhhccc
Q 009719 154 NILTLSFAPRDSHKAQIQFALERGIP--AFVAMLGTRR-LPFP-----AFSFDIVHCSRCLIPFTAYNATYLIEVDRLLR 225 (527)
Q Consensus 154 ~V~~msiAp~D~seaqvq~A~eRg~p--a~~~v~dae~-LPFp-----D~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLR 225 (527)
.|+++++.+.....++- .+.+.|+. +.+.++|+.. ++.. +++||+|++... ......+|.++.|+||
T Consensus 87 ~v~~iD~~~~~~~~a~~-~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~----~~~~~~~l~~~~~~Lk 161 (242)
T 3r3h_A 87 QVITCDINEGWTKHAHP-YWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDAD----KTNYLNYYELALKLVT 161 (242)
T ss_dssp EEEEEECCCSSCCCSHH-HHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEESC----GGGHHHHHHHHHHHEE
T ss_pred EEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcCC----hHHhHHHHHHHHHhcC
Confidence 45666666554332222 22233553 5677778744 4432 689999998753 2222348999999999
Q ss_pred CCcEEEEec
Q 009719 226 PGGYLVISG 234 (527)
Q Consensus 226 PGG~lviS~ 234 (527)
|||++++..
T Consensus 162 pGG~lv~d~ 170 (242)
T 3r3h_A 162 PKGLIAIDN 170 (242)
T ss_dssp EEEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999964
No 448
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=95.19 E-value=0.024 Score=57.30 Aligned_cols=81 Identities=10% Similarity=0.106 Sum_probs=55.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC--CcEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI--PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~--pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
+|.|+-. ...+..+..+ |.++.+++.|+++ ++ .+.+..+|+..++ ++||+|++.-- + ....+
T Consensus 206 ~G~~~l~-a~~~~~V~~v---D~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP--~---~~~~~ 273 (336)
T 2yx1_A 206 VGPFSIA-CKNAKKIYAI---DINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP--K---FAHKF 273 (336)
T ss_dssp TSHHHHH-TTTSSEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT--T---TGGGG
T ss_pred cCHHHHh-ccCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc--H---hHHHH
Confidence 5666655 5433333333 6777888877654 54 3667778887766 89999998631 1 11248
Q ss_pred HHHHhhcccCCcEEEEecC
Q 009719 217 LIEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~p 235 (527)
+.++.++|+|||.++++..
T Consensus 274 l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 274 IDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEEEEe
Confidence 9999999999999998654
No 449
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=95.15 E-value=0.025 Score=56.95 Aligned_cols=77 Identities=17% Similarity=0.137 Sum_probs=56.0
Q ss_pred eeccCcChHHHHHHHHH----cCCCcEEeeccccCCCCCCCcccEEEecCcccccccCh-----------------HHHH
Q 009719 159 SFAPRDSHKAQIQFALE----RGIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYN-----------------ATYL 217 (527)
Q Consensus 159 siAp~D~seaqvq~A~e----Rg~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~-----------------~~aL 217 (527)
.+...|.++.+++.|+. .|+.+.+..+|+.. +.++..||+|++.--+.++.... ..++
T Consensus 161 ~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l 239 (344)
T 2f8l_A 161 HASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFI 239 (344)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHH
Confidence 44455777788888865 36667777788755 44578999999986654443221 1379
Q ss_pred HHHhhcccCCcEEEEecCC
Q 009719 218 IEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp 236 (527)
.++.+.|||||++++..|.
T Consensus 240 ~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 240 EQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp HHHHHTEEEEEEEEEEEEG
T ss_pred HHHHHHhCCCCEEEEEECc
Confidence 9999999999999998863
No 450
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=95.10 E-value=0.007 Score=56.30 Aligned_cols=81 Identities=11% Similarity=-0.007 Sum_probs=50.4
Q ss_pred hhccccccccCC--eeEEeeccCcChHHHHHHHHHcCCCcEEeeccccCCCCC-----------CCcccEEEecCcc---
Q 009719 143 VASFGGSMLSEN--ILTLSFAPRDSHKAQIQFALERGIPAFVAMLGTRRLPFP-----------AFSFDIVHCSRCL--- 206 (527)
Q Consensus 143 vgsfga~Ll~r~--V~~msiAp~D~seaqvq~A~eRg~pa~~~v~dae~LPFp-----------D~SFDlV~cs~~l--- 206 (527)
.|.|+.+|..++ |+++++.+... ...+.+.++|...++.. .++||+|+|....
T Consensus 36 ~G~~s~~la~~~~~V~gvD~~~~~~-----------~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~ 104 (191)
T 3dou_A 36 PGGWTQVLNSLARKIISIDLQEMEE-----------IAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVS 104 (191)
T ss_dssp TCHHHHHHTTTCSEEEEEESSCCCC-----------CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCC
T ss_pred CCHHHHHHHHcCCcEEEEecccccc-----------CCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCC
Confidence 566776776664 45555554311 11356777887776532 1499999986421
Q ss_pred ccc-ccC------hHHHHHHHhhcccCCcEEEEec
Q 009719 207 IPF-TAY------NATYLIEVDRLLRPGGYLVISG 234 (527)
Q Consensus 207 ~hw-~d~------~~~aL~Ei~RVLRPGG~lviS~ 234 (527)
-++ .+. ...+|.++.|+|||||.|++..
T Consensus 105 g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 105 GIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 011 111 1237899999999999999865
No 451
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=95.03 E-value=0.0035 Score=65.42 Aligned_cols=119 Identities=18% Similarity=0.247 Sum_probs=63.9
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccccccc--cccCCCCCCCCCccchhhhcCc-cc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGLIGVY--HDWCEPFSTYPRTYDLIHVSGI-ES 446 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGLiG~~--hdwce~fstYPrtyDLiHa~~~-fs 446 (527)
.+|||++||+|+|+.++....--|.. +|.. ..|..+-+ .|+-..+ .|..+.+..++..||+|.++-- |+
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~ga~V~a---vDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~ 292 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARKGAYALA---VDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLV 292 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCEEEE---EESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCC
T ss_pred CeEEEcccchhHHHHHHHHcCCeEEE---EECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCC
Confidence 47999999999999888655432333 3332 33333222 2332111 2222222223544999987632 12
Q ss_pred cccCCCCCCC----CCcccccceeecccccCCcEEEEeC------CHHHHHHHHHHHhcCCceeE
Q 009719 447 LIKNPGSNKN----SCSLVDLMVEMDRMLRPEGTVVVRD------SPEVIDKVSRIANTVRWTAA 501 (527)
Q Consensus 447 ~~~~~~~~~~----rC~~~~illEmDRILRP~G~~iird------~~~~~~~i~~i~~~l~W~~~ 501 (527)
.-. ++ .-....++-++=|+|+|||++++.. ..+..+.+++.+....-+..
T Consensus 293 ~~~-----~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~ 352 (393)
T 4dmg_A 293 KRP-----EELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLR 352 (393)
T ss_dssp SSG-----GGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEE
T ss_pred CCH-----HHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEE
Confidence 100 00 0112467788889999999999653 22344556666554444443
No 452
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=94.99 E-value=0.0032 Score=62.81 Aligned_cols=88 Identities=17% Similarity=0.101 Sum_probs=54.2
Q ss_pred eeEeecCCCccchhhhccCC--C---eeEEEecCCCCCCchhHhhhc----cccc---cccccCCCCCCCCCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--P---VWVMNVVPARKSSTLSVIYDR----GLIG---VYHDWCEPFSTYPRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~---VwvMnvvp~~~~ntl~vi~eR----GLiG---~~hdwce~fstYPrtyDLiHa~ 442 (527)
.+|||+|||.|.++..|... . |..+-+- ++.+..+-++ |+-. ...|..+... -...||+|.+.
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s----~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~-~~~~fD~Iv~~ 151 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYS----RKICEIAKRNVERLGIENVIFVCGDGYYGVP-EFSPYDVIFVT 151 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESC----HHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEEC
T ss_pred CEEEEecCCchHHHHHHHHhcCCCCEEEEEECC----HHHHHHHHHHHHHcCCCCeEEEECChhhccc-cCCCeEEEEEc
Confidence 48999999999999888543 1 3333221 2444444443 5421 1223332211 12679999998
Q ss_pred CccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC
Q 009719 443 GIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS 482 (527)
Q Consensus 443 ~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~ 482 (527)
..+... .-++-|+|+|||.+++...
T Consensus 152 ~~~~~~---------------~~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 152 VGVDEV---------------PETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp SBBSCC---------------CHHHHHHEEEEEEEEEEBC
T ss_pred CCHHHH---------------HHHHHHhcCCCcEEEEEEC
Confidence 766532 2367889999999999753
No 453
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=94.76 E-value=0.013 Score=59.18 Aligned_cols=140 Identities=11% Similarity=0.121 Sum_probs=68.1
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhhc------cc----ccc-ccccCCCCCCCCCccchhh
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYDR------GL----IGV-YHDWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~eR------GL----iG~-~hdwce~fstYPrtyDLiH 440 (527)
-++|||+|||.|+++..|... ++-. |+-++-. .-+.++-++ |+ +-+ ..|..+.+..-+.+||+|-
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~--v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEK--VTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCE--EEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCE--EEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 478999999999999999776 3322 2222221 222222221 22 111 1111111111257899998
Q ss_pred hcCccccccCCCCCCCCCcc-cccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEe--cCCCCCCCC
Q 009719 441 VSGIESLIKNPGSNKNSCSL-VDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVH--DKEPGSNGR 512 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~-~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~--~~e~~~~~~ 512 (527)
++. +..+. . ..-.. ..++-++-|+|+|||.+++.. ..+.+..+.+..+.+-=.+... .....+.+.
T Consensus 187 ~d~-~~~~~----~-~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~ 260 (314)
T 2b2c_A 187 TDS-SDPVG----P-AESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGS 260 (314)
T ss_dssp ECC-C------------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGE
T ss_pred EcC-CCCCC----c-chhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCc
Confidence 754 22221 0 00011 567888999999999999974 2233344444433332233222 111122122
Q ss_pred ceEEEEEec
Q 009719 513 EKILVATKS 521 (527)
Q Consensus 513 ekiLi~~K~ 521 (527)
-.+++|.|.
T Consensus 261 ~g~~~ask~ 269 (314)
T 2b2c_A 261 MGYLICAKN 269 (314)
T ss_dssp EEEEEEESS
T ss_pred eEEEEEeCC
Confidence 257888876
No 454
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=94.76 E-value=0.054 Score=53.17 Aligned_cols=129 Identities=12% Similarity=0.046 Sum_probs=66.8
Q ss_pred CeeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc------cc----cccccccCCCCCCCCCccchhhh
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR------GL----IGVYHDWCEPFSTYPRTYDLIHV 441 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR------GL----iG~~hdwce~fstYPrtyDLiHa 441 (527)
.-++|||+|||.|+++..+...+ - .|+-++-. .-+.++-++ ++ +-+.+ ..++ .|+.+||+|=+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~--~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~--~D~~-~~~~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-T--HIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAK--QLLD-LDIKKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-C--EEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEES--SGGG-SCCCCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-C--EEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEe--chHH-HHHhhCCEEEE
Confidence 34799999999999998887665 2 22222221 111211111 11 11111 1111 12377999977
Q ss_pred cCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEecCCCCC-CCCceE
Q 009719 442 SGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVHDKEPGS-NGREKI 515 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~~~e~~~-~~~eki 515 (527)
+. + + -...+-++-|.|+|||.+++.. ..+.+..+.+.+++.--.+... ...-| .+.-.+
T Consensus 146 d~--~---------d---p~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~-~~~vP~~g~~~~ 210 (262)
T 2cmg_A 146 LQ--E---------P---DIHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPF-VAPLRILSNKGY 210 (262)
T ss_dssp SS--C---------C---CHHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEE-CCTTCTTCCEEE
T ss_pred CC--C---------C---hHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEE-EEccCCCcccEE
Confidence 51 1 1 0226778999999999999962 2233444444334332223222 22222 233457
Q ss_pred EEEEecc
Q 009719 516 LVATKSL 522 (527)
Q Consensus 516 Li~~K~~ 522 (527)
++|.|++
T Consensus 211 ~~as~~~ 217 (262)
T 2cmg_A 211 IYASFKT 217 (262)
T ss_dssp EEEESSC
T ss_pred EEeeCCC
Confidence 7888864
No 455
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=94.74 E-value=0.0026 Score=60.54 Aligned_cols=103 Identities=9% Similarity=0.042 Sum_probs=47.1
Q ss_pred eeeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhh----ccc---ccccc-c----cCCCCCCC-CCccc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYD----RGL---IGVYH-D----WCEPFSTY-PRTYD 437 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~e----RGL---iG~~h-d----wce~fstY-PrtyD 437 (527)
-..|||+|||.|.++.+|... ..- |+-+|-. ..+..+-+ .|+ +-+++ | +-+++... +.+||
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWY---FLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYD 142 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBS
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCe---EEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCccc
Confidence 347999999999998877543 222 2222222 33333322 244 22222 2 22233211 15899
Q ss_pred hhhhcCcccccc-CCCC-----CCCCCcccccceeecccccCCcEEEE
Q 009719 438 LIHVSGIESLIK-NPGS-----NKNSCSLVDLMVEMDRMLRPEGTVVV 479 (527)
Q Consensus 438 LiHa~~~fs~~~-~~~~-----~~~rC~~~~illEmDRILRP~G~~ii 479 (527)
+|-++--|.... .... .........++-|+-|+|+|||.+.+
T Consensus 143 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 143 FCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp EEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred EEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 999875443211 0000 00001112455688888888886644
No 456
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=94.73 E-value=0.005 Score=63.19 Aligned_cols=121 Identities=17% Similarity=0.204 Sum_probs=65.6
Q ss_pred eeeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----ccc--cccc-ccCCCCCCC---CCccchhhhc
Q 009719 374 IRNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GLI--GVYH-DWCEPFSTY---PRTYDLIHVS 442 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GLi--G~~h-dwce~fstY---PrtyDLiHa~ 442 (527)
=.+|||++||.|+|+.++... .-+|+-+|.. ..+..+-+. |+- -+++ |..+.+... +.+||+|-++
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 368999999999999888765 2344444433 333333222 331 1111 111111111 4689999875
Q ss_pred CccccccCCCCCCCC----CcccccceeecccccCCcEEEEeCC-----HH-HHHHHHHHHhcCCceeE
Q 009719 443 GIESLIKNPGSNKNS----CSLVDLMVEMDRMLRPEGTVVVRDS-----PE-VIDKVSRIANTVRWTAA 501 (527)
Q Consensus 443 ~~fs~~~~~~~~~~r----C~~~~illEmDRILRP~G~~iird~-----~~-~~~~i~~i~~~l~W~~~ 501 (527)
--..... .+.. -....++.++-|+|+|||.+++... .+ ..+.+++.+.....+..
T Consensus 287 pP~~~~~----~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 351 (382)
T 1wxx_A 287 PPAFAKG----KKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLR 351 (382)
T ss_dssp CCCSCCS----TTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCCC----hhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 3221110 0000 1124688889999999999999842 22 34555555555554443
No 457
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=94.71 E-value=0.0066 Score=60.90 Aligned_cols=144 Identities=12% Similarity=0.054 Sum_probs=71.4
Q ss_pred eeeEeecCCCccchhhhccCC-CeeEEEecCCCCC-CchhHhhh------cc-c----ccc-ccccCCCCCCCCCccchh
Q 009719 374 IRNIMDMNAFFGGFAAALTSD-PVWVMNVVPARKS-STLSVIYD------RG-L----IGV-YHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~-~VwvMnvvp~~~~-ntl~vi~e------RG-L----iG~-~hdwce~fstYPrtyDLi 439 (527)
-++|||+|||.|+++..|.+. ++-- |+-++-. .-+.++-+ .| + +-+ ..|-.+.....+.+||+|
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~--v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEK--AVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCE--EEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCE--EEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 479999999999999999876 3321 1112211 22222211 11 1 111 111111111125789999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC------CHHHHHHHHHHHhcCCceeEEec--CCCCCCC
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD------SPEVIDKVSRIANTVRWTAAVHD--KEPGSNG 511 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird------~~~~~~~i~~i~~~l~W~~~~~~--~e~~~~~ 511 (527)
-++... .+.. ......--...++-++-|+|+|||.+++.. ..+.+..+.+..+..--.+.... ...+ .+
T Consensus 156 i~d~~~-~~~~-~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~-~g 232 (314)
T 1uir_A 156 IIDLTD-PVGE-DNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGF-FL 232 (314)
T ss_dssp EEECCC-CBST-TCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGG-TE
T ss_pred EECCCC-cccc-cCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCC-CC
Confidence 987432 2200 000000002467889999999999999872 22344555554444433332211 1111 22
Q ss_pred CceEEEEEecc
Q 009719 512 REKILVATKSL 522 (527)
Q Consensus 512 ~ekiLi~~K~~ 522 (527)
...+++|.|++
T Consensus 233 ~~~~~~as~~~ 243 (314)
T 1uir_A 233 NFGFLLASDAF 243 (314)
T ss_dssp EEEEEEEESSS
T ss_pred eEEEEEEECCC
Confidence 34578888863
No 458
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=94.61 E-value=0.014 Score=60.99 Aligned_cols=104 Identities=22% Similarity=0.278 Sum_probs=54.0
Q ss_pred eeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhc----cc-cccc-cccCCCCCCCC-CccchhhhcCc
Q 009719 375 RNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDR----GL-IGVY-HDWCEPFSTYP-RTYDLIHVSGI 444 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eR----GL-iG~~-hdwce~fstYP-rtyDLiHa~~~ 444 (527)
.+|||+|||.|+++..|.+. +. .|+-.|.. ..+..+-++ |+ +-+. .|..+.-..++ ..||+|-++--
T Consensus 248 ~~VLDlgaG~G~~t~~la~~~~~~---~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~P 324 (429)
T 1sqg_A 248 EHILDLCAAPGGKTTHILEVAPEA---QVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAP 324 (429)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTC---EEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECC
T ss_pred CeEEEECCCchHHHHHHHHHcCCC---EEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCC
Confidence 47999999999998887542 11 22222322 444544443 54 1111 12211100133 68999985422
Q ss_pred cccc----cCCCC--CCCCCcc-------cccceeecccccCCcEEEEeC
Q 009719 445 ESLI----KNPGS--NKNSCSL-------VDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 445 fs~~----~~~~~--~~~rC~~-------~~illEmDRILRP~G~~iird 481 (527)
.|.. ..|.. ....-++ ..+|-++-++|+|||.+++.+
T Consensus 325 csg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 325 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp CCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2110 00000 0000111 256888999999999999975
No 459
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=94.58 E-value=0.05 Score=57.18 Aligned_cols=85 Identities=20% Similarity=0.281 Sum_probs=56.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLI 218 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~ 218 (527)
+|.|+..|...+..+..+ |.++.+++.|+++ ++.+.+..+|+..++.. +||+|++.--.. .....++.
T Consensus 301 ~G~~sl~la~~~~~V~gv---D~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr~---g~~~~~~~ 372 (425)
T 2jjq_A 301 VGTFGIYLAKRGFNVKGF---DSNEFAIEMARRNVEINNVDAEFEVASDREVSVK--GFDTVIVDPPRA---GLHPRLVK 372 (425)
T ss_dssp TTHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT--TCSEEEECCCTT---CSCHHHHH
T ss_pred chHHHHHHHHcCCEEEEE---ECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc--CCCEEEEcCCcc---chHHHHHH
Confidence 677777777665433333 7778888888654 55566788888877532 899999864321 12222455
Q ss_pred HHhhcccCCcEEEEecCC
Q 009719 219 EVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 219 Ei~RVLRPGG~lviS~pp 236 (527)
.+ +.|+|||.+++|..|
T Consensus 373 ~l-~~l~p~givyvsc~p 389 (425)
T 2jjq_A 373 RL-NREKPGVIVYVSCNP 389 (425)
T ss_dssp HH-HHHCCSEEEEEESCH
T ss_pred HH-HhcCCCcEEEEECCh
Confidence 54 569999999999754
No 460
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=94.56 E-value=0.00028 Score=67.81 Aligned_cols=88 Identities=10% Similarity=0.018 Sum_probs=55.6
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC---CCcEEeeccccCCCCCC-CcccEEEecC-----------ccc
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG---IPAFVAMLGTRRLPFPA-FSFDIVHCSR-----------CLI 207 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg---~pa~~~v~dae~LPFpD-~SFDlV~cs~-----------~l~ 207 (527)
.|.++..|..++.. +...|.++.+++.|+++. ..+.+..+|+..+|+++ ++| .|+++. .+.
T Consensus 40 ~G~~~~~l~~~~~~---v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~ 115 (245)
T 1yub_A 40 KGHLTTKLAKISKQ---VTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHLSTQIIKKVVF 115 (245)
T ss_dssp CSSCSHHHHHHSSE---EEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCSSSCHHHHHHHHH
T ss_pred CCHHHHHHHHhCCe---EEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCccccHHHHHHHHh
Confidence 45555556665533 333366666666665542 13567788999999984 799 666652 123
Q ss_pred ccccChHHHH----HHHhhcccCCcEEEEecC
Q 009719 208 PFTAYNATYL----IEVDRLLRPGGYLVISGP 235 (527)
Q Consensus 208 hw~d~~~~aL----~Ei~RVLRPGG~lviS~p 235 (527)
|+..... ++ .++.|+|||||.|.+..+
T Consensus 116 ~~~~~~~-~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 116 ESRASDI-YLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp HCCCEEE-EEEEESSHHHHHHCGGGSHHHHTT
T ss_pred CCCCCeE-EEEeeHHHHHHHhCCCCchhhhhe
Confidence 3333333 55 669999999999888765
No 461
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=94.54 E-value=0.0079 Score=63.86 Aligned_cols=106 Identities=8% Similarity=0.093 Sum_probs=59.0
Q ss_pred HHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCC-C---eeEEEecCCCCCCchhHh-------h----hccc-cc-
Q 009719 358 VAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSD-P---VWVMNVVPARKSSTLSVI-------Y----DRGL-IG- 420 (527)
Q Consensus 358 v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~-~---VwvMnvvp~~~~ntl~vi-------~----eRGL-iG- 420 (527)
|....+.+. +.. -..|||+|||.|.+++.|... + |+-+-+.+ ..+.++ - ..|+ ++
T Consensus 231 v~~ml~~l~--l~~--g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~----~~l~~A~~Ml~~ar~~~~~~Gl~~~n 302 (433)
T 1u2z_A 231 LSDVYQQCQ--LKK--GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMD----DASDLTILQYEELKKRCKLYGMRLNN 302 (433)
T ss_dssp HHHHHHHTT--CCT--TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCH----HHHHHHHHHHHHHHHHHHHTTBCCCC
T ss_pred HHHHHHhcC--CCC--CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCH----HHHHHHHHhHHHHHHHHHHcCCCCCc
Confidence 444444443 333 357999999999999888653 2 44333322 222222 2 2342 11
Q ss_pred --ccc--ccCCC--CCCCCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 421 --VYH--DWCEP--FSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 421 --~~h--dwce~--fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
+.+ ++.+. |..-..+||+|-++..+ +. =++...|-||-|+|+|||.+|+.+
T Consensus 303 V~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l--~~--------~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 303 VEFSLKKSFVDNNRVAELIPQCDVILVNNFL--FD--------EDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp EEEEESSCSTTCHHHHHHGGGCSEEEECCTT--CC--------HHHHHHHHHHHTTCCTTCEEEESS
T ss_pred eEEEEcCccccccccccccCCCCEEEEeCcc--cc--------ccHHHHHHHHHHhCCCCeEEEEee
Confidence 111 11111 11113679999875332 10 023456789999999999999985
No 462
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=94.47 E-value=0.011 Score=59.15 Aligned_cols=143 Identities=14% Similarity=0.175 Sum_probs=69.9
Q ss_pred CeeeEeecCCCccchhhhccCCC-eeEEEecCCCCCCchhHhhh------ccc----cccc-cccCCCCCCCCCccchhh
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKSSTLSVIYD------RGL----IGVY-HDWCEPFSTYPRTYDLIH 440 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~ntl~vi~e------RGL----iG~~-hdwce~fstYPrtyDLiH 440 (527)
.-++|||+|||.|+++..|.+.+ +-.+-.|=.+ +.-+.++-+ .|+ +-++ .|-.+.+...+.+||+|-
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid-~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEID-EDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESC-HHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECC-HHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 34799999999999999998763 3222111111 122222221 122 1111 111111122357899999
Q ss_pred hcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEe--cCCCCCCCCc
Q 009719 441 VSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVH--DKEPGSNGRE 513 (527)
Q Consensus 441 a~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~--~~e~~~~~~e 513 (527)
++.. ..+. | ...-....++-++-|+|+|||.+++.. ..+.+..+.+..+.+-=.+... .....+.+.-
T Consensus 174 ~d~~-~~~~-~---~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~ 248 (304)
T 2o07_A 174 TDSS-DPMG-P---AESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQI 248 (304)
T ss_dssp EECC----------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEE
T ss_pred ECCC-CCCC-c---chhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcce
Confidence 8632 2111 0 000011457788899999999999974 2334444444433332222221 1112222234
Q ss_pred eEEEEEec
Q 009719 514 KILVATKS 521 (527)
Q Consensus 514 kiLi~~K~ 521 (527)
.+++|.|.
T Consensus 249 g~~~as~~ 256 (304)
T 2o07_A 249 GFMLCSKN 256 (304)
T ss_dssp EEEEEESS
T ss_pred EEEEEeCC
Confidence 57788875
No 463
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.40 E-value=0.063 Score=54.11 Aligned_cols=91 Identities=18% Similarity=0.222 Sum_probs=54.5
Q ss_pred EEeecccc-CCC-CCCCcccEEEec--Cccc---cc--------ccChHHHHHHHhhcccCCcEEEEecCCCCCCCc---
Q 009719 181 FVAMLGTR-RLP-FPAFSFDIVHCS--RCLI---PF--------TAYNATYLIEVDRLLRPGGYLVISGPPVQWPKQ--- 242 (527)
Q Consensus 181 ~~~v~dae-~LP-FpD~SFDlV~cs--~~l~---hw--------~d~~~~aL~Ei~RVLRPGG~lviS~pp~~~~~~--- 242 (527)
.+..+|+. .|. +++++||+|+++ +... +| .......|.|+.|||||||.+++.....+..+.
T Consensus 16 ~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~~ 95 (323)
T 1boo_A 16 SMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPAR 95 (323)
T ss_dssp EEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEEE
T ss_pred eEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCccc
Confidence 45556653 354 678999999988 2111 11 112334899999999999999997653211111
Q ss_pred -hhHHHHHHHHHHhcceEEeeeecceEEEeCCCc
Q 009719 243 -DKEWADLQAVARALCYELIAVDGNTVIWKKPVG 275 (527)
Q Consensus 243 -~~~w~~i~~l~~~mcW~~~~~~~~v~iwrKp~~ 275 (527)
...+..+.++.+..-|+.. +.-||+|+..
T Consensus 96 ~~~~~~~i~~~~~~~Gf~~~----~~iiW~k~~~ 125 (323)
T 1boo_A 96 SIYNFRVLIRMIDEVGFFLA----EDFYWFNPSK 125 (323)
T ss_dssp CCHHHHHHHHHHHTTCCEEE----EEEEEECSSC
T ss_pred ccchHHHHHHHHHhCCCEEE----EEEEEecCCC
Confidence 1234444445555557655 3458988753
No 464
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=94.39 E-value=0.011 Score=54.12 Aligned_cols=107 Identities=12% Similarity=-0.028 Sum_probs=57.5
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc--cccccccccCCCCCCCCCccchhhhcCccccccCC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR--GLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNP 451 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR--GLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~ 451 (527)
.+|||+|||.|.|+.+|...+.- .|+-+|.. ..+..+-++ .+--+..|. ..+|.+||+|-++..|..+.
T Consensus 53 ~~vlD~gcG~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~d~----~~~~~~~D~v~~~~p~~~~~-- 124 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYLLGAE--SVTAFDIDPDAIETAKRNCGGVNFMVADV----SEISGKYDTWIMNPPFGSVV-- 124 (200)
T ss_dssp SEEEEETCTTCHHHHHHHHTTBS--EEEEEESCHHHHHHHHHHCTTSEEEECCG----GGCCCCEEEEEECCCC------
T ss_pred CEEEEEeCCccHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhcCCCEEEECcH----HHCCCCeeEEEECCCchhcc--
Confidence 58999999999999988766431 12222222 334433333 221111222 22468999999988877653
Q ss_pred CCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCC
Q 009719 452 GSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVR 497 (527)
Q Consensus 452 ~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~ 497 (527)
+. ....++-++=|+| |.+++..+......+.+++....
T Consensus 125 ----~~-~~~~~l~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 125 ----KH-SDRAFIDKAFETS---MWIYSIGNAKARDFLRREFSARG 162 (200)
T ss_dssp --------CHHHHHHHHHHE---EEEEEEEEGGGHHHHHHHHHHHE
T ss_pred ----Cc-hhHHHHHHHHHhc---CcEEEEEcCchHHHHHHHHHHCC
Confidence 11 1134565666666 44544444455566666655543
No 465
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=94.30 E-value=0.01 Score=57.13 Aligned_cols=128 Identities=9% Similarity=0.072 Sum_probs=80.6
Q ss_pred eeeEeecCCCccchhhhccCC--CeeEEEecCCCCC-CchhHhhhc----cccc-cccccCCCC-CCCCCccchhhhcCc
Q 009719 374 IRNIMDMNAFFGGFAAALTSD--PVWVMNVVPARKS-STLSVIYDR----GLIG-VYHDWCEPF-STYPRTYDLIHVSGI 444 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~--~VwvMnvvp~~~~-ntl~vi~eR----GLiG-~~hdwce~f-stYPrtyDLiHa~~~ 444 (527)
-.+|||+|||+|.+|.++... .+ .+.-+|-. .-+.++-++ |+-+ +-+ +... ...|-+||+|=+..+
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a---~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKI---IYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKM 124 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCC---EEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCC---EEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhH
Confidence 569999999999999999555 33 34444444 334433332 3321 111 2221 134678998766655
Q ss_pred cccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-----------HHHHHHHHHHHhcCCceeEEecCCCCCCCCc
Q 009719 445 ESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-----------PEVIDKVSRIANTVRWTAAVHDKEPGSNGRE 513 (527)
Q Consensus 445 fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-----------~~~~~~i~~i~~~l~W~~~~~~~e~~~~~~e 513 (527)
+-+..+ . ...+..+=+.|||||.||--+. ..+-...++.+..=-|.+..... +.|
T Consensus 125 LHlL~~---~------~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~-----~nE 190 (200)
T 3fzg_A 125 LPVLKQ---Q------DVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVI-----GNE 190 (200)
T ss_dssp HHHHHH---T------TCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEE-----TTE
T ss_pred HHhhhh---h------HHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeee-----Cce
Confidence 544431 1 3356688899999999998861 33667788888888888766533 356
Q ss_pred eEEEEEe
Q 009719 514 KILVATK 520 (527)
Q Consensus 514 kiLi~~K 520 (527)
-+.|.+|
T Consensus 191 l~y~~~~ 197 (200)
T 3fzg_A 191 LVYITSG 197 (200)
T ss_dssp EEEEECC
T ss_pred EEEEEec
Confidence 6766665
No 466
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=94.27 E-value=0.0062 Score=58.80 Aligned_cols=86 Identities=14% Similarity=0.109 Sum_probs=53.8
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcC---CCcEEeeccccCCCCCC-CcccEEEecC-----------ccc
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERG---IPAFVAMLGTRRLPFPA-FSFDIVHCSR-----------CLI 207 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg---~pa~~~v~dae~LPFpD-~SFDlV~cs~-----------~l~ 207 (527)
.|.++..|+.++..+..+ |.++.+++.|+++. ....+..+|+..+|+++ ..|+ |+++. .+.
T Consensus 41 ~G~lt~~l~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-vv~nlPy~~~~~~l~~~l~ 116 (244)
T 1qam_A 41 KGHFTLELVQRCNFVTAI---EIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYK-IFGNIPYNISTDIIRKIVF 116 (244)
T ss_dssp TSHHHHHHHHHSSEEEEE---CSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCCE-EEEECCGGGHHHHHHHHHH
T ss_pred chHHHHHHHHcCCeEEEE---ECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCeE-EEEeCCcccCHHHHHHHHh
Confidence 456666677766443333 77889999998763 23567889999999985 5664 45432 222
Q ss_pred ccccChHHHH---HH-HhhcccCCcEEEEe
Q 009719 208 PFTAYNATYL---IE-VDRLLRPGGYLVIS 233 (527)
Q Consensus 208 hw~d~~~~aL---~E-i~RVLRPGG~lviS 233 (527)
|+..... ++ +| +.|+|+|||.+.+.
T Consensus 117 ~~~~~~~-~lm~q~e~a~rll~~~G~l~v~ 145 (244)
T 1qam_A 117 DSIADEI-YLIVEYGFAKRLLNTKRSLALF 145 (244)
T ss_dssp SCCCSEE-EEEEEHHHHHHHTCTTSHHHHH
T ss_pred cCCCCeE-EEEEEHHHHHHHhcCCcchhHH
Confidence 3322222 34 35 78888888765544
No 467
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=94.25 E-value=0.0079 Score=61.86 Aligned_cols=120 Identities=10% Similarity=0.133 Sum_probs=63.9
Q ss_pred eeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHhh----hcccc---ccc-cccCCCCCCC---CCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVIY----DRGLI---GVY-HDWCEPFSTY---PRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi~----eRGLi---G~~-hdwce~fstY---PrtyDLiHa~ 442 (527)
.+|||++||.|+|+.+|...+. -|..|=.. +..+..+- ..|+- -.+ .|..+.+..+ ..+||+|-++
T Consensus 219 ~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s--~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIAGADEVIGIDKS--PRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHTTCSEEEEEESC--HHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEecCCCCHHHHHHHHCCCCEEEEEeCC--HHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 5899999999999988876532 23222211 12222221 12321 111 1111111111 3579999885
Q ss_pred CccccccCCCCCCCC-------CcccccceeecccccCCcEEEEeCC-----HH-HHHHHHHHHhcCCceeEEe
Q 009719 443 GIESLIKNPGSNKNS-------CSLVDLMVEMDRMLRPEGTVVVRDS-----PE-VIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 443 ~~fs~~~~~~~~~~r-------C~~~~illEmDRILRP~G~~iird~-----~~-~~~~i~~i~~~l~W~~~~~ 503 (527)
--+.. ..+ -....++.++=|+|+|||.+++... .+ ..+.+++.+.....+..+.
T Consensus 297 pP~~~-------~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i 363 (396)
T 2as0_A 297 PPAFV-------QHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKML 363 (396)
T ss_dssp CCCSC-------SSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEES
T ss_pred CCCCC-------CCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 32210 011 1235688899999999999888742 22 3444555565555555544
No 468
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=94.18 E-value=0.065 Score=55.78 Aligned_cols=77 Identities=13% Similarity=0.175 Sum_probs=50.1
Q ss_pred CCeeEEeeccCcChHHHHHHHHHcCCC--cEEeeccccCCCCCCCcccEEEec---CcccccccChHHHHHHHhhcccCC
Q 009719 153 ENILTLSFAPRDSHKAQIQFALERGIP--AFVAMLGTRRLPFPAFSFDIVHCS---RCLIPFTAYNATYLIEVDRLLRPG 227 (527)
Q Consensus 153 r~V~~msiAp~D~seaqvq~A~eRg~p--a~~~v~dae~LPFpD~SFDlV~cs---~~l~hw~d~~~~aL~Ei~RVLRPG 227 (527)
+.|.+++.++ ..+...+.+++.|.. +.+..++++.+.+| +.||+|+|- .++.+ ......++...+|.||||
T Consensus 107 ~~V~ave~s~--~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~l~~-e~~l~~~l~a~~r~Lkp~ 182 (376)
T 4hc4_A 107 RRVYAVEASA--IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYGLLH-ESMLSSVLHARTKWLKEG 182 (376)
T ss_dssp SEEEEEECST--THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTTBTT-TCSHHHHHHHHHHHEEEE
T ss_pred CEEEEEeChH--HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccccccc-cchhhhHHHHHHhhCCCC
Confidence 3466666543 222223344455654 56677888898888 679999983 34433 223344888899999999
Q ss_pred cEEEEe
Q 009719 228 GYLVIS 233 (527)
Q Consensus 228 G~lviS 233 (527)
|.++-+
T Consensus 183 G~~iP~ 188 (376)
T 4hc4_A 183 GLLLPA 188 (376)
T ss_dssp EEEESC
T ss_pred ceECCc
Confidence 999854
No 469
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=94.03 E-value=0.018 Score=56.81 Aligned_cols=142 Identities=17% Similarity=0.142 Sum_probs=69.8
Q ss_pred CeeeEeecCCCccchhhhccCCC-eeEEEecCCCCC-CchhHhhhc------cc----cc-cccccCCCCCCCCCccchh
Q 009719 373 AIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARKS-STLSVIYDR------GL----IG-VYHDWCEPFSTYPRTYDLI 439 (527)
Q Consensus 373 ~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~~-ntl~vi~eR------GL----iG-~~hdwce~fstYPrtyDLi 439 (527)
.-++|||+|||.|+++..+.+.+ +-- |+-++-. .-+.++-++ |+ +- +..|-.+.....+.+||+|
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~--v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVEN--IDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCE--EEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCE--EEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 34799999999999999997663 321 1112211 222222111 01 00 1111111111126789999
Q ss_pred hhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-----HHHHHHHHHHHhcCCceeEEe--cCCCCCCCC
Q 009719 440 HVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-----PEVIDKVSRIANTVRWTAAVH--DKEPGSNGR 512 (527)
Q Consensus 440 Ha~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-----~~~~~~i~~i~~~l~W~~~~~--~~e~~~~~~ 512 (527)
-++.. ..+. ....---..++-++-|+|+|||.+++... .+.+..+.+.+++.--.+... .....+.+.
T Consensus 156 i~d~~-~~~~----~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~ 230 (283)
T 2i7c_A 156 IVDSS-DPIG----PAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGC 230 (283)
T ss_dssp EEECC-CTTT----GGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGE
T ss_pred EEcCC-CCCC----cchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCc
Confidence 88632 2221 00000004677889999999999999842 233444444333332233222 122222222
Q ss_pred ceEEEEEec
Q 009719 513 EKILVATKS 521 (527)
Q Consensus 513 ekiLi~~K~ 521 (527)
-.+++|.|+
T Consensus 231 ~g~~~~s~~ 239 (283)
T 2i7c_A 231 IGILCCSKT 239 (283)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEeCC
Confidence 356777765
No 470
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=93.97 E-value=0.018 Score=58.76 Aligned_cols=142 Identities=14% Similarity=0.121 Sum_probs=70.3
Q ss_pred eeeEeecCCCccchhhhccC-CC-eeEEEecCCCCCCchhHhhhc-cc-----ccc-ccccCCCCCCCC-CccchhhhcC
Q 009719 374 IRNIMDMNAFFGGFAAALTS-DP-VWVMNVVPARKSSTLSVIYDR-GL-----IGV-YHDWCEPFSTYP-RTYDLIHVSG 443 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~-~~-VwvMnvvp~~~~ntl~vi~eR-GL-----iG~-~hdwce~fstYP-rtyDLiHa~~ 443 (527)
-.+|||+|||.|+++..|.+ .| + -+-+|=.+. .-+.++-++ ++ +-+ ..|-.+-...++ .+||+|-++
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~-~v~~VEidp-~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D- 166 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQS-RNTVVELDA-ELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRD- 166 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTC-EEEEEESCH-HHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEEC-
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCc-EEEEEECCH-HHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEEC-
Confidence 34899999999999999876 33 3 222221111 111211111 00 001 111111111233 789999875
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC----HHHHHH-HHHHHhcCCceeEEe-cCC--CCCCCCceE
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS----PEVIDK-VSRIANTVRWTAAVH-DKE--PGSNGREKI 515 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~----~~~~~~-i~~i~~~l~W~~~~~-~~e--~~~~~~eki 515 (527)
+|..+. ....-.-..++-++-|+|+|||.+++.-. .+.+.. ++.+.+.+. .+.+. +.. .+.....-|
T Consensus 167 ~~~~~~----~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~-~v~~~~~~~~~~g~~~gN~V 241 (317)
T 3gjy_A 167 VFAGAI----TPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFE-HVAVIADPPMLKGRRYGNII 241 (317)
T ss_dssp CSTTSC----CCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCS-EEEEEECHHHHTTSSCEEEE
T ss_pred CCCccc----cchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCC-ceEEEEecCCCCCCcCceEE
Confidence 343321 00111114677889999999999998732 122222 223333332 23332 211 122334678
Q ss_pred EEEEeccC
Q 009719 516 LVATKSLW 523 (527)
Q Consensus 516 Li~~K~~w 523 (527)
|+|.|.-.
T Consensus 242 l~As~~pl 249 (317)
T 3gjy_A 242 LMGSDTEF 249 (317)
T ss_dssp EEEESSCC
T ss_pred EEEECCCC
Confidence 99988754
No 471
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=93.95 E-value=0.018 Score=59.48 Aligned_cols=137 Identities=12% Similarity=0.125 Sum_probs=70.0
Q ss_pred eeEeecCCCccchhhhccCCCe-eEEEecCCCCCCchhHhh----hccccc----cc-cccCCCCCCC---CCccchhhh
Q 009719 375 RNIMDMNAFFGGFAAALTSDPV-WVMNVVPARKSSTLSVIY----DRGLIG----VY-HDWCEPFSTY---PRTYDLIHV 441 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~V-wvMnvvp~~~~ntl~vi~----eRGLiG----~~-hdwce~fstY---PrtyDLiHa 441 (527)
.+|||++||+|+|+.++..... -|..|=.. +..+..+- ..|+-+ .+ .|.-+.++.. ..+||+|-+
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s--~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAMATTSVDLA--KRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEEESC--TTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEEeeccCHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 4799999999999988866432 23322211 12222221 123321 11 1111101111 247999877
Q ss_pred cCccccccCCCCCCCCCc------ccccceeecccccCCcEEEEeCC------HHHHHHHHHHHhcCCceeEEe-----c
Q 009719 442 SGIESLIKNPGSNKNSCS------LVDLMVEMDRMLRPEGTVVVRDS------PEVIDKVSRIANTVRWTAAVH-----D 504 (527)
Q Consensus 442 ~~~fs~~~~~~~~~~rC~------~~~illEmDRILRP~G~~iird~------~~~~~~i~~i~~~l~W~~~~~-----~ 504 (527)
+--... .+..+. +..++-+.-|+|+|||.+++... ....+.+++.+....++.... |
T Consensus 292 DPP~~~------~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~D 365 (385)
T 2b78_A 292 DPPSFA------RNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLDLQQLPSD 365 (385)
T ss_dssp CCCCC-----------CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCEEEEEECCCTT
T ss_pred CCCCCC------CChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCcEEEeCCCCCC
Confidence 532210 001111 12356667899999999999852 234556777777777762211 4
Q ss_pred CCCCCCCCc----eEEEEE
Q 009719 505 KEPGSNGRE----KILVAT 519 (527)
Q Consensus 505 ~e~~~~~~e----kiLi~~ 519 (527)
|.-.+..+| |.++++
T Consensus 366 ~p~~~~~~e~~yLk~~~~~ 384 (385)
T 2b78_A 366 FAVNVQDESSNYLKVFTIK 384 (385)
T ss_dssp SCCCTTCGGGCCCEEEEEE
T ss_pred CCCCCCCCCCCCceEEEEE
Confidence 433333445 666654
No 472
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=93.73 E-value=0.03 Score=56.38 Aligned_cols=148 Identities=10% Similarity=0.064 Sum_probs=76.4
Q ss_pred CCCeeeEeecCCCccchhhhccCCCe----eEEEecCCCCC-CchhHhhh----ccc-cccccccCCCCCCCC-Cccchh
Q 009719 371 TPAIRNIMDMNAFFGGFAAALTSDPV----WVMNVVPARKS-STLSVIYD----RGL-IGVYHDWCEPFSTYP-RTYDLI 439 (527)
Q Consensus 371 ~~~iRnvmDm~ag~GgFaAaL~~~~V----wvMnvvp~~~~-ntl~vi~e----RGL-iG~~hdwce~fstYP-rtyDLi 439 (527)
...-..|+|.+||.|+|+.++.+.-- =-.+|.=.+-. .++.++-. +|+ +-+++ ...+...+ ..||+|
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~--~D~l~~~~~~~fD~I 205 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLH--QDGLANLLVDPVDVV 205 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEE--SCTTSCCCCCCEEEE
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEE--CCCCCccccCCccEE
Confidence 34567899999999999877743210 00122222222 33333322 354 12221 22333333 789999
Q ss_pred hhcCccccccC--------CCCCCCCCc-cc-ccceeecccccCCcEEEEeC-----CHHHHHHHHHHHhcCCceeEEec
Q 009719 440 HVSGIESLIKN--------PGSNKNSCS-LV-DLMVEMDRMLRPEGTVVVRD-----SPEVIDKVSRIANTVRWTAAVHD 504 (527)
Q Consensus 440 Ha~~~fs~~~~--------~~~~~~rC~-~~-~illEmDRILRP~G~~iird-----~~~~~~~i~~i~~~l~W~~~~~~ 504 (527)
-++--|..+.. +.. .++.. .. .++.++-+.|+|||.+++-- ..+.-.++++.+..-.|-..+.+
T Consensus 206 i~NPPfg~~~~~~~~~~~~~~~-~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~~ii~ 284 (344)
T 2f8l_A 206 ISDLPVGYYPDDENAKTFELCR-EEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIK 284 (344)
T ss_dssp EEECCCSEESCHHHHTTSTTCC-SSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEEEEEE
T ss_pred EECCCCCCcCchhhhhhccccC-CCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEEEeee
Confidence 99877754420 000 01111 11 35778889999999987753 11223566665544445332222
Q ss_pred CC----CCCCCCceEEEEEec
Q 009719 505 KE----PGSNGREKILVATKS 521 (527)
Q Consensus 505 ~e----~~~~~~ekiLi~~K~ 521 (527)
.. .+.....-|+|.+|+
T Consensus 285 lp~~~F~~~~~~~~i~vl~k~ 305 (344)
T 2f8l_A 285 LPETLFKSEQARKSILILEKA 305 (344)
T ss_dssp CCGGGSCC-CCCEEEEEEEEC
T ss_pred CChhhccCCCCceEEEEEECC
Confidence 11 122345567777764
No 473
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=93.67 E-value=0.046 Score=54.65 Aligned_cols=136 Identities=13% Similarity=0.117 Sum_probs=75.0
Q ss_pred CccccchhhHHHHHHHHHHHHHhhhccCCCCeeeEeecCCCccchhhhccCCC-eeEEEecCCCC-CCchhHhh----hc
Q 009719 343 GYDVFEADSRRWRRRVAYYKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSDP-VWVMNVVPARK-SSTLSVIY----DR 416 (527)
Q Consensus 343 ~~~~f~~d~~~W~~~v~~Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~~-VwvMnvvp~~~-~ntl~vi~----eR 416 (527)
+.-.|..+....+.++.++ ++.| ..|+||+||+|+|+-.+.... .-|.. .|- +..+..+- .-
T Consensus 104 ~k~~f~~~~~~er~ri~~~-------~~~g--~~VlD~~aG~G~~~i~~a~~g~~~V~a---vD~np~a~~~~~~N~~~N 171 (278)
T 3k6r_A 104 AKIMFSPANVKERVRMAKV-------AKPD--ELVVDMFAGIGHLSLPIAVYGKAKVIA---IEKDPYTFKFLVENIHLN 171 (278)
T ss_dssp TTSCCCGGGHHHHHHHHHH-------CCTT--CEEEETTCTTTTTTHHHHHHTCCEEEE---ECCCHHHHHHHHHHHHHT
T ss_pred cceEEcCCcHHHHHHHHHh-------cCCC--CEEEEecCcCcHHHHHHHHhcCCeEEE---EECCHHHHHHHHHHHHHc
Confidence 3345777878777776543 3344 479999999999985543332 22222 222 13233222 22
Q ss_pred cccccccccCCCCCCCC--CccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeC-------CHHHHH
Q 009719 417 GLIGVYHDWCEPFSTYP--RTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD-------SPEVID 487 (527)
Q Consensus 417 GLiG~~hdwce~fstYP--rtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird-------~~~~~~ 487 (527)
|+-+...-.+.-...++ ..||.|-.+-..+. ...|=+.=++|+|||++.+-+ ..+..+
T Consensus 172 ~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p~~~-------------~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e 238 (278)
T 3k6r_A 172 KVEDRMSAYNMDNRDFPGENIADRILMGYVVRT-------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFE 238 (278)
T ss_dssp TCTTTEEEECSCTTTCCCCSCEEEEEECCCSSG-------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHH
T ss_pred CCCCcEEEEeCcHHHhccccCCCEEEECCCCcH-------------HHHHHHHHHHcCCCCEEEEEeeecccccchhHHH
Confidence 44221111111111223 57887655432221 234444558999999987753 233577
Q ss_pred HHHHHHhcCCceeEEe
Q 009719 488 KVSRIANTVRWTAAVH 503 (527)
Q Consensus 488 ~i~~i~~~l~W~~~~~ 503 (527)
.++++++...+++...
T Consensus 239 ~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 239 TFKRITKEYGYDVEKL 254 (278)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCcEEEE
Confidence 8888999888887654
No 474
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=93.65 E-value=0.06 Score=59.86 Aligned_cols=126 Identities=18% Similarity=0.203 Sum_probs=73.7
Q ss_pred ccCccccchhhHHH---HHHHHHHHHHhh-hccCCCCeeeEeecCCCccch------hhhccCCCe--eEEEecCCCCCC
Q 009719 341 KNGYDVFEADSRRW---RRRVAYYKNTLN-VKLGTPAIRNIMDMNAFFGGF------AAALTSDPV--WVMNVVPARKSS 408 (527)
Q Consensus 341 g~~~~~f~~d~~~W---~~~v~~Y~~~l~-~~i~~~~iRnvmDm~ag~GgF------aAaL~~~~V--wvMnvvp~~~~n 408 (527)
..+-|.|++|.-+. ++.+.++.+... ..-...+.-.|||+|||.|-. ||+-...+| +..=--| .+--
T Consensus 321 s~tYevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~ 399 (637)
T 4gqb_A 321 SQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVV 399 (637)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHH
T ss_pred hhhhhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHH
Confidence 35679999997544 333333332111 112334567899999999955 455555544 4432212 1236
Q ss_pred chhHhhhccc---cccccccCCCCCCCCCccchhhhcCccccccCCCCCCCCCcccccceee----cccccCCcEEEE
Q 009719 409 TLSVIYDRGL---IGVYHDWCEPFSTYPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEM----DRMLRPEGTVVV 479 (527)
Q Consensus 409 tl~vi~eRGL---iG~~hdwce~fstYPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEm----DRILRP~G~~ii 479 (527)
+++++-+.|+ |=++|.--|-.. =|.-.|+| .|-|. +-|.+...|+|+ ||.|+|||.+|=
T Consensus 400 a~~~v~~N~~~dkVtVI~gd~eev~-LPEKVDII-----VSEwM------G~fLl~E~mlevL~Ardr~LKPgGimiP 465 (637)
T 4gqb_A 400 TLENWQFEEWGSQVTVVSSDMREWV-APEKADII-----VSELL------GSFADNELSPECLDGAQHFLKDDGVSIP 465 (637)
T ss_dssp HHHHHHHHTTGGGEEEEESCTTTCC-CSSCEEEE-----ECCCC------BTTBGGGCHHHHHHHHGGGEEEEEEEES
T ss_pred HHHHHHhccCCCeEEEEeCcceecc-CCcccCEE-----EEEcC------cccccccCCHHHHHHHHHhcCCCcEEcc
Confidence 7888888886 545554334432 35555554 55666 345555555564 999999998763
No 475
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=93.63 E-value=0.017 Score=58.35 Aligned_cols=88 Identities=10% Similarity=0.047 Sum_probs=51.6
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCCCchhHhhh----ccc---cccccccCCCCCCCCCccchhhhcCcccc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKSSTLSVIYD----RGL---IGVYHDWCEPFSTYPRTYDLIHVSGIESL 447 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~ntl~vi~e----RGL---iG~~hdwce~fstYPrtyDLiHa~~~fs~ 447 (527)
.+|+|++||+|+|+.+ .....-|..|=.. +..+..+-+ .|+ +-+++ .-...++.+||+|-++--..
T Consensus 197 ~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s--~~ai~~a~~n~~~n~l~~~v~~~~---~D~~~~~~~fD~Vi~dpP~~- 269 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CKNAKKIYAIDIN--PHAIELLKKNIKLNKLEHKIIPIL---SDVREVDVKGNRVIMNLPKF- 269 (336)
T ss_dssp CEEEETTCTTSHHHHH-TTTSSEEEEEESC--HHHHHHHHHHHHHTTCTTTEEEEE---SCGGGCCCCEEEEEECCTTT-
T ss_pred CEEEEccCccCHHHHh-ccCCCEEEEEECC--HHHHHHHHHHHHHcCCCCcEEEEE---CChHHhcCCCcEEEECCcHh-
Confidence 5799999999999988 6644333333211 122332222 233 21222 11112337899988752211
Q ss_pred ccCCCCCCCCCcccccceeecccccCCcEEEEeC
Q 009719 448 IKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 448 ~~~~~~~~~rC~~~~illEmDRILRP~G~~iird 481 (527)
...++-++-|+|+|||.+++.+
T Consensus 270 ------------~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 270 ------------AHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp ------------GGGGHHHHHHHEEEEEEEEEEE
T ss_pred ------------HHHHHHHHHHHcCCCCEEEEEE
Confidence 1367788889999999998864
No 476
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=93.52 E-value=0.089 Score=53.52 Aligned_cols=137 Identities=15% Similarity=0.132 Sum_probs=69.3
Q ss_pred eEeecCCCccchhhhccCC-----CeeEEEecCCCCCCchhHhhhccccccccccCCCCCCCCCccchhhhcCccccccC
Q 009719 376 NIMDMNAFFGGFAAALTSD-----PVWVMNVVPARKSSTLSVIYDRGLIGVYHDWCEPFSTYPRTYDLIHVSGIESLIKN 450 (527)
Q Consensus 376 nvmDm~ag~GgFaAaL~~~-----~VwvMnvvp~~~~ntl~vi~eRGLiG~~hdwce~fstYPrtyDLiHa~~~fs~~~~ 450 (527)
.|||.|||.|+|+.++.++ .|.-+-+-|.... ++ + ++--...|..+. . ....||+|-++--|.....
T Consensus 42 ~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~----~a-~-~~~~~~~D~~~~-~-~~~~fD~Ii~NPPy~~~~~ 113 (421)
T 2ih2_A 42 RVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALD----LP-P-WAEGILADFLLW-E-PGEAFDLILGNPPYGIVGE 113 (421)
T ss_dssp EEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCC----CC-T-TEEEEESCGGGC-C-CSSCEEEEEECCCCCCBSC
T ss_pred EEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHH----hC-C-CCcEEeCChhhc-C-ccCCCCEEEECcCccCccc
Confidence 7999999999999988653 2333333332211 11 1 110011111111 0 1268999998644432210
Q ss_pred C-------------------CCCCCCCc-ccccceeecccccCCcEEEEeCCH-----HHHHHHHHHHhcCCceeEEecC
Q 009719 451 P-------------------GSNKNSCS-LVDLMVEMDRMLRPEGTVVVRDSP-----EVIDKVSRIANTVRWTAAVHDK 505 (527)
Q Consensus 451 ~-------------------~~~~~rC~-~~~illEmDRILRP~G~~iird~~-----~~~~~i~~i~~~l~W~~~~~~~ 505 (527)
. .....+-+ ...++-.+-++|+|||.+++--.. +...++++.+....+ ..+.+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~-~~i~~l 192 (421)
T 2ih2_A 114 ASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK-TSVYYL 192 (421)
T ss_dssp TTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE-EEEEEE
T ss_pred ccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC-eEEEEC
Confidence 0 00000001 114566788999999998765322 234667777666666 332221
Q ss_pred ---CCCCCCCceEEEEEec
Q 009719 506 ---EPGSNGREKILVATKS 521 (527)
Q Consensus 506 ---e~~~~~~ekiLi~~K~ 521 (527)
-++....--|++.+|.
T Consensus 193 ~~~F~~~~~~~~il~~~k~ 211 (421)
T 2ih2_A 193 GEVFPQKKVSAVVIRFQKS 211 (421)
T ss_dssp ESCSTTCCCCEEEEEEESS
T ss_pred CCCCCCCCccEEEEEEEeC
Confidence 1233334456777773
No 477
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=93.47 E-value=0.026 Score=54.89 Aligned_cols=123 Identities=11% Similarity=0.104 Sum_probs=73.2
Q ss_pred hhhccCCCCeeeEeecCCCccchhhhccCC-C---eeEEEecCCCCCCchhHhhhccccc----cccccCCCCCCCCC-c
Q 009719 365 LNVKLGTPAIRNIMDMNAFFGGFAAALTSD-P---VWVMNVVPARKSSTLSVIYDRGLIG----VYHDWCEPFSTYPR-T 435 (527)
Q Consensus 365 l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~-~---VwvMnvvp~~~~ntl~vi~eRGLiG----~~hdwce~fstYPr-t 435 (527)
+...+..+ -.|+|+|||+|.++.+|... | |+-+-+-|.--...-.-+-..|+-. ...|+-++++ |. .
T Consensus 9 l~~~v~~g--~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~--~~~~ 84 (225)
T 3kr9_A 9 VASFVSQG--AILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFE--ETDQ 84 (225)
T ss_dssp HHTTSCTT--EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC--GGGC
T ss_pred HHHhCCCC--CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcc--cCcC
Confidence 33445555 47999999999999998654 3 3333332221111112233345422 2234434432 13 5
Q ss_pred cchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEEe
Q 009719 436 YDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVH 503 (527)
Q Consensus 436 yDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~~ 503 (527)
||+|=-.+. .+..|..||-+.-..|+|+|++|++-. .-..++++.+....|.+.-.
T Consensus 85 ~D~IviaG~-----------Gg~~i~~Il~~~~~~L~~~~~lVlq~~-~~~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 85 VSVITIAGM-----------GGRLIARILEEGLGKLANVERLILQPN-NREDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp CCEEEEEEE-----------CHHHHHHHHHHTGGGCTTCCEEEEEES-SCHHHHHHHHHHTTEEEEEE
T ss_pred CCEEEEcCC-----------ChHHHHHHHHHHHHHhCCCCEEEEECC-CCHHHHHHHHHHCCCEEEEE
Confidence 885432211 223356788888899999999999876 35678888888889987654
No 478
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=93.25 E-value=0.01 Score=57.91 Aligned_cols=102 Identities=22% Similarity=0.194 Sum_probs=52.1
Q ss_pred eeEeecCCCccchhhhccC--CC-eeEEEecCCCCC-CchhHhhhc----cc--cccc-cccCCCCCCC----CCccchh
Q 009719 375 RNIMDMNAFFGGFAAALTS--DP-VWVMNVVPARKS-STLSVIYDR----GL--IGVY-HDWCEPFSTY----PRTYDLI 439 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~--~~-VwvMnvvp~~~~-ntl~vi~eR----GL--iG~~-hdwce~fstY----PrtyDLi 439 (527)
..|||+|||.|+++..|.. .+ --| +-.|.. ..+..+-++ |+ +-+. .|.. .+... +..||+|
T Consensus 85 ~~VLDlgaG~G~~t~~la~~~~~~~~v---~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~-~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 85 DFILDMCAAPGGKTTHLAQLMKNKGTI---VAVEISKTRTKALKSNINRMGVLNTIIINADMR-KYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CEEEETTCTTCHHHHHHHHHTTTCSEE---EEEESCHHHHHHHHHHHHHTTCCSEEEEESCHH-HHHHHHHHTTCCEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEE---EEECCCHHHHHHHHHHHHHhCCCcEEEEeCChH-hcchhhhhccccCCEE
Confidence 4799999999999977754 22 222 222222 334443333 43 1111 1111 11111 4679999
Q ss_pred hhcCcccccc----CCC-CC---CCC-CcccccceeecccccCCcEEEEe
Q 009719 440 HVSGIESLIK----NPG-SN---KNS-CSLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 440 Ha~~~fs~~~----~~~-~~---~~r-C~~~~illEmDRILRP~G~~iir 480 (527)
-++--+|... .|. .. .+. -....+|-++-|+|+|||.+++.
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~s 210 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYS 210 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 8763222110 000 00 000 11246777888999999999997
No 479
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=93.16 E-value=0.079 Score=52.67 Aligned_cols=81 Identities=16% Similarity=0.138 Sum_probs=49.7
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CC-CcEEeeccccCCCCCCCcccEEEecCcccccccChH-HH
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GI-PAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNA-TY 216 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~-pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~-~a 216 (527)
.|.++..|..++..+..+ |.++.+++.|+++ +. .+.+..+|+..+|++ +||+|+|... .+|....- ..
T Consensus 53 ~G~lt~~La~~~~~v~~v---Di~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~D~Vv~n~p-y~~~~~~~~~l 126 (299)
T 2h1r_A 53 TGNLTVKLLPLAKKVITI---DIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KFDVCTANIP-YKISSPLIFKL 126 (299)
T ss_dssp TSTTHHHHTTTSSEEEEE---CSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CCSEEEEECC-GGGHHHHHHHH
T ss_pred CcHHHHHHHhcCCEEEEE---ECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cCCEEEEcCC-cccccHHHHHH
Confidence 466666777776544444 7788888888764 33 356677888888775 8999999754 35543321 12
Q ss_pred H---------------HHHhhcccCCcE
Q 009719 217 L---------------IEVDRLLRPGGY 229 (527)
Q Consensus 217 L---------------~Ei~RVLRPGG~ 229 (527)
| .++.|+++|+|.
T Consensus 127 l~~~~~~~~~~l~~Q~e~a~rlla~~G~ 154 (299)
T 2h1r_A 127 ISHRPLFKCAVLMFQKEFAERMLANVGD 154 (299)
T ss_dssp HHCSSCCSEEEEEEEHHHHHHHTCCTTS
T ss_pred HhcCCccceeeehHHHHHHHHHhcCCCC
Confidence 2 346788888774
No 480
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=93.05 E-value=0.081 Score=52.65 Aligned_cols=69 Identities=13% Similarity=-0.044 Sum_probs=53.9
Q ss_pred CcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHHHHHHhhcccCCcEEEE
Q 009719 163 RDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYLIEVDRLLRPGGYLVI 232 (527)
Q Consensus 163 ~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL~Ei~RVLRPGG~lvi 232 (527)
.|++..++++++++ |.+..+.+.|...-|++. +||+|....+++|..+..+..+.++..-|+|+|.+|-
T Consensus 132 ~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 132 CDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE-AGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp EESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEE
T ss_pred EeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC-CcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEE
Confidence 37778899888765 667778888988888776 8999999988877755443366699999999977664
No 481
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=93.05 E-value=0.17 Score=52.80 Aligned_cols=86 Identities=13% Similarity=0.164 Sum_probs=57.0
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC-cEEeeccccC----CCCCCCcccEEEecCcccccccCh
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP-AFVAMLGTRR----LPFPAFSFDIVHCSRCLIPFTAYN 213 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p-a~~~v~dae~----LPFpD~SFDlV~cs~~l~hw~d~~ 213 (527)
+|.++..|...+..+..+ |.++.+++.|+++ ++. +.+..+|+.. +|+++++||+|++.--. ....
T Consensus 297 ~G~~~~~la~~~~~V~gv---D~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr---~g~~ 370 (433)
T 1uwv_A 297 MGNFTLPLATQAASVVGV---EGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPAR---AGAA 370 (433)
T ss_dssp TTTTHHHHHTTSSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCT---TCCH
T ss_pred CCHHHHHHHhhCCEEEEE---eCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECCCC---ccHH
Confidence 667777777665433333 7788888888754 443 6677788766 67888999999985321 1112
Q ss_pred HHHHHHHhhcccCCcEEEEecCC
Q 009719 214 ATYLIEVDRLLRPGGYLVISGPP 236 (527)
Q Consensus 214 ~~aL~Ei~RVLRPGG~lviS~pp 236 (527)
. ++..+. -++|++.+++|-.|
T Consensus 371 ~-~~~~l~-~~~p~~ivyvsc~p 391 (433)
T 1uwv_A 371 G-VMQQII-KLEPIRIVYVSCNP 391 (433)
T ss_dssp H-HHHHHH-HHCCSEEEEEESCH
T ss_pred H-HHHHHH-hcCCCeEEEEECCh
Confidence 2 444444 37999999998754
No 482
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=92.97 E-value=0.036 Score=57.72 Aligned_cols=97 Identities=15% Similarity=0.215 Sum_probs=61.9
Q ss_pred eeeEeecCCCccchhhhcc----------------C-CCeeEE-EecCCCCCCch----------------------hHh
Q 009719 374 IRNIMDMNAFFGGFAAALT----------------S-DPVWVM-NVVPARKSSTL----------------------SVI 413 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~----------------~-~~VwvM-nvvp~~~~ntl----------------------~vi 413 (527)
-=.|+|+||+.|..+..+. + ..+.|. |=.|.+.-||| +-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 4568999999998877661 1 346664 66666442322 123
Q ss_pred hhccccccccccCCCCCCCC-CccchhhhcCccccccCCCCCCCCCc---------------------------------
Q 009719 414 YDRGLIGVYHDWCEPFSTYP-RTYDLIHVSGIESLIKNPGSNKNSCS--------------------------------- 459 (527)
Q Consensus 414 ~eRGLiG~~hdwce~fstYP-rtyDLiHa~~~fs~~~~~~~~~~rC~--------------------------------- 459 (527)
|-=|..|.++... || +++|++|.+..|- |. .+.-+.
T Consensus 133 f~~gvpgSFy~rl-----fP~~S~d~v~Ss~aLH-Wl----s~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~ 202 (374)
T 3b5i_A 133 FVAGVPGSFYRRL-----FPARTIDFFHSAFSLH-WL----SQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQA 202 (374)
T ss_dssp EEEEEESCTTSCC-----SCTTCEEEEEEESCTT-BC----SSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHH
T ss_pred EEEecChhhhccc-----CCCcceEEEEecceee-ee----ccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHH
Confidence 4445677777543 35 8999999987775 43 111121
Q ss_pred -ccccceeecccccCCcEEEEe
Q 009719 460 -LVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 460 -~~~illEmDRILRP~G~~iir 480 (527)
+..+|-..=|.|+|||.+++.
T Consensus 203 D~~~fL~~ra~eL~pGG~mvl~ 224 (374)
T 3b5i_A 203 DLAEFLRARAAEVKRGGAMFLV 224 (374)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEE
Confidence 223455669999999999986
No 483
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.86 E-value=0.097 Score=51.83 Aligned_cols=92 Identities=29% Similarity=0.350 Sum_probs=52.9
Q ss_pred cEEeeccccC-CC-CCCCcccEEEecCcc---cccc----------------cChHHHHHHHhhcccCCcEEEEecCCCC
Q 009719 180 AFVAMLGTRR-LP-FPAFSFDIVHCSRCL---IPFT----------------AYNATYLIEVDRLLRPGGYLVISGPPVQ 238 (527)
Q Consensus 180 a~~~v~dae~-LP-FpD~SFDlV~cs~~l---~hw~----------------d~~~~aL~Ei~RVLRPGG~lviS~pp~~ 238 (527)
..+..+|+.. |+ +++++||+|+++==. ..+. +.....+.|+.|+|||||.+++......
T Consensus 22 ~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~ 101 (297)
T 2zig_A 22 HRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVA 101 (297)
T ss_dssp EEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEE
T ss_pred CEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCc
Confidence 3566677654 44 678999999987211 1111 0112367899999999999998765211
Q ss_pred --CC--Cch---hHHHHHHHHHHhcceEEeeeecceEEEeCCCc
Q 009719 239 --WP--KQD---KEWADLQAVARALCYELIAVDGNTVIWKKPVG 275 (527)
Q Consensus 239 --~~--~~~---~~w~~i~~l~~~mcW~~~~~~~~v~iwrKp~~ 275 (527)
.. +.. .-...+..+.+..-|.... .-||.|+.+
T Consensus 102 ~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~----~iiW~K~~~ 141 (297)
T 2zig_A 102 VARRRFGRHLVFPLHADIQVRCRKLGFDNLN----PIIWHKHTN 141 (297)
T ss_dssp EECC----EEEECHHHHHHHHHHHTTCEEEE----EEEEECC--
T ss_pred cccccCCcccccccHHHHHHHHHHcCCeeec----cEEEeCCCC
Confidence 00 000 0124455556666676553 448999853
No 484
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=92.86 E-value=0.17 Score=49.37 Aligned_cols=109 Identities=18% Similarity=0.010 Sum_probs=68.7
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
|..+.+|...+... .+...|.++.+++.|+++ |+. +.+..+|....+.+++.||+|+.+...-+ .-...|
T Consensus 33 G~l~i~la~~~~~~-~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg~---lI~~IL 108 (230)
T 3lec_A 33 AYLPIFLLQMGYCD-FAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMGGR---LIADIL 108 (230)
T ss_dssp THHHHHHHHTTCEE-EEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHH---HHHHHH
T ss_pred HHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCchH---HHHHHH
Confidence 33444455554221 233347788888888754 553 56677787666666668999875443211 112378
Q ss_pred HHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeee
Q 009719 218 IEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVD 264 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~ 264 (527)
.+..+.|+++|+|++++-. ....+.+.....-|....+.
T Consensus 109 ~~~~~~l~~~~~lIlqp~~--------~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 109 NNDIDKLQHVKTLVLQPNN--------REDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp HHTGGGGTTCCEEEEEESS--------CHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHhCcCCEEEEECCC--------ChHHHHHHHHHCCCEEEEEE
Confidence 8889999999999999741 13445555666678877664
No 485
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=92.75 E-value=0.28 Score=48.91 Aligned_cols=109 Identities=7% Similarity=0.153 Sum_probs=66.6
Q ss_pred hhccccccccCCe-eEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHH
Q 009719 143 VASFGGSMLSENI-LTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNAT 215 (527)
Q Consensus 143 vgsfga~Ll~r~V-~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~ 215 (527)
+|.|+-.++.++. .+..+ |.++..++.+++. ++. ..+..+|+..++. .+.||.|+...- + ....
T Consensus 136 ~G~~~i~~a~~g~~~V~av---D~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p--~---~~~~ 206 (278)
T 3k6r_A 136 IGHLSLPIAVYGKAKVIAI---EKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV--V---RTHE 206 (278)
T ss_dssp TTTTTHHHHHHTCCEEEEE---CCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC--S---SGGG
T ss_pred CcHHHHHHHHhcCCeEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC--C---cHHH
Confidence 6677666665553 33333 6666777766543 554 4566788877664 578999986531 1 2223
Q ss_pred HHHHHhhcccCCcEEEEecC-CCCCCCchhHHHHHHHHHHhcceEEe
Q 009719 216 YLIEVDRLLRPGGYLVISGP-PVQWPKQDKEWADLQAVARALCYELI 261 (527)
Q Consensus 216 aL~Ei~RVLRPGG~lviS~p-p~~~~~~~~~w~~i~~l~~~mcW~~~ 261 (527)
+|.+..++|||||.+.+..- +... ......+.++++++...++.-
T Consensus 207 ~l~~a~~~lk~gG~ih~~~~~~e~~-~~~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 207 FIPKALSIAKDGAIIHYHNTVPEKL-MPREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp GHHHHHHHEEEEEEEEEEEEEEGGG-TTTTTHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCCEEEEEeeecccc-cchhHHHHHHHHHHHcCCcEE
Confidence 88999999999999976432 1100 011234567777777777653
No 486
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=92.37 E-value=0.063 Score=52.39 Aligned_cols=139 Identities=17% Similarity=0.179 Sum_probs=79.6
Q ss_pred hhhccCCCCeeeEeecCCCccchhhhccCC-C---eeEEEecCCCCCCchhHhhhccccc----cccccCCCCCCCCC-c
Q 009719 365 LNVKLGTPAIRNIMDMNAFFGGFAAALTSD-P---VWVMNVVPARKSSTLSVIYDRGLIG----VYHDWCEPFSTYPR-T 435 (527)
Q Consensus 365 l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~-~---VwvMnvvp~~~~ntl~vi~eRGLiG----~~hdwce~fstYPr-t 435 (527)
+...+..+ -.|+|+|||.|-++.+|... + |+-+-+.|.--...-.-+-..|+-. ...|.-+.+. |. .
T Consensus 15 i~~~v~~g--~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~--~~~~ 90 (230)
T 3lec_A 15 VANYVPKG--ARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE--EADN 90 (230)
T ss_dssp HHTTSCTT--EEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC--GGGC
T ss_pred HHHhCCCC--CEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc--cccc
Confidence 34445555 57999999999999998665 2 3333333221111112233335422 1223333332 33 5
Q ss_pred cchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEEecC--CCCCCCCc
Q 009719 436 YDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAVHDK--EPGSNGRE 513 (527)
Q Consensus 436 yDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~~~~--e~~~~~~e 513 (527)
||+|=-.+. ..-.|..||-+.-+.|.++|++|++-... .+.+++.+....|.+.-.+. |++- --
T Consensus 91 ~D~IviaGm-----------Gg~lI~~IL~~~~~~l~~~~~lIlqp~~~-~~~lr~~L~~~Gf~i~~E~lv~e~~~--~Y 156 (230)
T 3lec_A 91 IDTITICGM-----------GGRLIADILNNDIDKLQHVKTLVLQPNNR-EDDLRKWLAANDFEIVAEDILTENDK--RY 156 (230)
T ss_dssp CCEEEEEEE-----------CHHHHHHHHHHTGGGGTTCCEEEEEESSC-HHHHHHHHHHTTEEEEEEEEEEC--C--EE
T ss_pred cCEEEEeCC-----------chHHHHHHHHHHHHHhCcCCEEEEECCCC-hHHHHHHHHHCCCEEEEEEEEEECCE--EE
Confidence 776532222 12234567777788899999999997544 67888888899998765432 2222 23
Q ss_pred eEEEEEec
Q 009719 514 KILVATKS 521 (527)
Q Consensus 514 kiLi~~K~ 521 (527)
.|+++.+.
T Consensus 157 eii~~~~~ 164 (230)
T 3lec_A 157 EILVVKHG 164 (230)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 46776653
No 487
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=92.04 E-value=0.027 Score=60.25 Aligned_cols=102 Identities=25% Similarity=0.330 Sum_probs=53.8
Q ss_pred eeEeecCCCccchhhhccCC---CeeEEEecCCCCC-CchhHhhhc----cc--cccc-cccCCCCCC-CCCccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTSD---PVWVMNVVPARKS-STLSVIYDR----GL--IGVY-HDWCEPFST-YPRTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~---~VwvMnvvp~~~~-ntl~vi~eR----GL--iG~~-hdwce~fst-YPrtyDLiHa~ 442 (527)
..||||+||.|+++..|... .--| +-.|-. .-+..+-++ |+ +-+. .|-. .++. .+.+||.|-++
T Consensus 119 ~~VLDl~aGpG~kt~~lA~~~~~~g~V---~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~-~~~~~~~~~fD~Il~D 194 (479)
T 2frx_A 119 QRVMDVAAAPGSKTTQISARMNNEGAI---LANEFSASRVKVLHANISRCGISNVALTHFDGR-VFGAAVPEMFDAILLD 194 (479)
T ss_dssp SEEEESSCTTSHHHHHHHHHTTTCSEE---EEECSSHHHHHHHHHHHHHHTCCSEEEECCCST-THHHHSTTCEEEEEEE
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEE---EEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHH-HhhhhccccCCEEEEC
Confidence 47999999999998777542 2222 223333 444444333 54 2222 2221 1222 35789999864
Q ss_pred Cccc----cccCCCCCCCC-------C--cccccceeecccccCCcEEEEe
Q 009719 443 GIES----LIKNPGSNKNS-------C--SLVDLMVEMDRMLRPEGTVVVR 480 (527)
Q Consensus 443 ~~fs----~~~~~~~~~~r-------C--~~~~illEmDRILRP~G~~iir 480 (527)
--.| .-++|...... | .-..+|-++=|+|||||.+|++
T Consensus 195 ~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~Lvys 245 (479)
T 2frx_A 195 APCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYS 245 (479)
T ss_dssp CCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 2111 10111100000 0 0125778888999999999997
No 488
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=91.75 E-value=0.1 Score=54.81 Aligned_cols=104 Identities=15% Similarity=0.192 Sum_probs=55.7
Q ss_pred eeEeecCCCccchhhhccC--CC-eeEEEecCCCCC-CchhHhhhc----cc--ccc-ccccCCCCCCCC-Cccchhhhc
Q 009719 375 RNIMDMNAFFGGFAAALTS--DP-VWVMNVVPARKS-STLSVIYDR----GL--IGV-YHDWCEPFSTYP-RTYDLIHVS 442 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~--~~-VwvMnvvp~~~~-ntl~vi~eR----GL--iG~-~hdwce~fstYP-rtyDLiHa~ 442 (527)
..|||+|||.|+++..|.. .+ -- |+-.|.. ..+..+-++ |+ +-+ ..|..+.-..++ .+||+|-++
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~~~~~---v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D 337 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMKNKGK---IYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLD 337 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSE---EEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCE---EEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEc
Confidence 3799999999999888854 22 22 2223333 445554444 55 211 123222111255 789999853
Q ss_pred Cccccc----cCCCC--CCCCCcc-------cccceeecccccCCcEEEEeC
Q 009719 443 GIESLI----KNPGS--NKNSCSL-------VDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 443 ~~fs~~----~~~~~--~~~rC~~-------~~illEmDRILRP~G~~iird 481 (527)
--.|.. ..|.. ....=++ ..+|-++-|+|+|||.+++.+
T Consensus 338 ~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 338 APCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp CCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 211110 00000 0000011 357888999999999999874
No 489
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=91.69 E-value=0.7 Score=48.18 Aligned_cols=130 Identities=16% Similarity=0.231 Sum_probs=72.6
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhh----ccc--c-ccccccCCCCCC--CC-CccchhhhcC
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYD----RGL--I-GVYHDWCEPFST--YP-RTYDLIHVSG 443 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~e----RGL--i-G~~hdwce~fst--YP-rtyDLiHa~~ 443 (527)
.+|+|+|||.|.|+.+|....--|. -.|.. ..+..+-+ .|+ + =+..|+.+.+.. ++ .+||+|=++-
T Consensus 288 ~~VLDlgcG~G~~~~~la~~~~~V~---gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dP 364 (433)
T 1uwv_A 288 DRVLDLFCGMGNFTLPLATQAASVV---GVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDP 364 (433)
T ss_dssp CEEEEESCTTTTTHHHHHTTSSEEE---EEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECC
T ss_pred CEEEECCCCCCHHHHHHHhhCCEEE---EEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECC
Confidence 4799999999999999987743332 22322 23332222 233 1 122344444433 22 5788876531
Q ss_pred ccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCcee---EEecCCCCCCCCceEEEEEe
Q 009719 444 IESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTA---AVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 444 ~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~---~~~~~e~~~~~~ekiLi~~K 520 (527)
.. ..| ..++-.+- -++|++.++++-+...+.+--.++..--|.. ...|.=+.+..-|-|.+-+|
T Consensus 365 --------Pr--~g~--~~~~~~l~-~~~p~~ivyvsc~p~tlard~~~l~~~Gy~~~~~~~~d~Fp~t~HvE~v~ll~r 431 (433)
T 1uwv_A 365 --------AR--AGA--AGVMQQII-KLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSR 431 (433)
T ss_dssp --------CT--TCC--HHHHHHHH-HHCCSEEEEEESCHHHHHHHHHHHHHTTCEEEEEEEECCSTTSSCCEEEEEEEC
T ss_pred --------CC--ccH--HHHHHHHH-hcCCCeEEEEECChHHHHhhHHHHHHCCcEEEEEEEeccCCCCCeEEEEEEEEE
Confidence 11 112 23332222 2789999999998887666444444445654 34565555556677766655
No 490
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=91.67 E-value=0.23 Score=48.88 Aligned_cols=109 Identities=11% Similarity=-0.088 Sum_probs=67.1
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccccCCCCCCCcccEEEecCcccccccChHHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATYL 217 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~aL 217 (527)
|..+.+|...+.. -.+...|.++..++.|+++ |+. +.+..+|......++..||+|+.+...-. --...|
T Consensus 33 G~l~i~la~~~~~-~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg~---lI~~IL 108 (244)
T 3gnl_A 33 AYLPCFAVKNQTA-SFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGGT---LIRTIL 108 (244)
T ss_dssp THHHHHHHHTTSE-EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHH---HHHHHH
T ss_pred HHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCchH---HHHHHH
Confidence 4444445555421 1233337788888888765 554 45667777666655557999886543211 111378
Q ss_pred HHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeee
Q 009719 218 IEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVD 264 (527)
Q Consensus 218 ~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~ 264 (527)
.+..+.|+++|+|++++-. ....+.+.....-|....+.
T Consensus 109 ~~~~~~L~~~~~lIlq~~~--------~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 109 EEGAAKLAGVTKLILQPNI--------AAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp HHTGGGGTTCCEEEEEESS--------CHHHHHHHHHHHTEEEEEEE
T ss_pred HHHHHHhCCCCEEEEEcCC--------ChHHHHHHHHHCCCEEEEEE
Confidence 8899999999999999741 12344555556678776553
No 491
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=91.64 E-value=0.09 Score=53.67 Aligned_cols=114 Identities=11% Similarity=0.035 Sum_probs=67.6
Q ss_pred eeEeecCCCccchhhhccCCCeeEEEecCCCCC-CchhHhhhc----cc--c-ccccccCCCCCC-CCCccchhhhcCcc
Q 009719 375 RNIMDMNAFFGGFAAALTSDPVWVMNVVPARKS-STLSVIYDR----GL--I-GVYHDWCEPFST-YPRTYDLIHVSGIE 445 (527)
Q Consensus 375 RnvmDm~ag~GgFaAaL~~~~VwvMnvvp~~~~-ntl~vi~eR----GL--i-G~~hdwce~fst-YPrtyDLiHa~~~f 445 (527)
..|||+| |.|.++.+|..... .-.|+-+|-. ..+.++-++ |+ + -+..|..+.++. ++.+||+|=++..|
T Consensus 174 ~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~ 251 (373)
T 2qm3_A 174 KDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPE 251 (373)
T ss_dssp CEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCS
T ss_pred CEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCC
Confidence 6899999 99999988854321 0122333432 455555443 54 2 223455544543 34689999887655
Q ss_pred ccccCCCCCCCCCcccccceeecccccCCc-EEEEe--C---CHHHHHHHHHHHh-cCCcee
Q 009719 446 SLIKNPGSNKNSCSLVDLMVEMDRMLRPEG-TVVVR--D---SPEVIDKVSRIAN-TVRWTA 500 (527)
Q Consensus 446 s~~~~~~~~~~rC~~~~illEmDRILRP~G-~~iir--d---~~~~~~~i~~i~~-~l~W~~ 500 (527)
... .+..+|-++-|+|+||| .+++. . +.+.+..+++++. .+....
T Consensus 252 ~~~----------~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 252 TLE----------AIRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVI 303 (373)
T ss_dssp SHH----------HHHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEE
T ss_pred chH----------HHHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcch
Confidence 432 13678889999999999 33443 2 2333366677665 555544
No 492
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=91.53 E-value=0.3 Score=49.21 Aligned_cols=86 Identities=10% Similarity=0.066 Sum_probs=59.8
Q ss_pred hhccccccccC--CeeEEeeccCcChHHHHHHHHHc----CCCcEEeeccccCCCCCCCcccEEEecCcccccccChHHH
Q 009719 143 VASFGGSMLSE--NILTLSFAPRDSHKAQIQFALER----GIPAFVAMLGTRRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 143 vgsfga~Ll~r--~V~~msiAp~D~seaqvq~A~eR----g~pa~~~v~dae~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
.|-++..++.. +.. +...|+++.++++++++ |++..+.+.|...-+ +...||+|.....++|..+..+..
T Consensus 143 ~GpLAl~~~~~~p~a~---y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~ 218 (281)
T 3lcv_B 143 LNPLAAPWMGLPAETV---YIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLPCLETQQRGS 218 (281)
T ss_dssp TGGGCCTTTTCCTTCE---EEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHHHHHHHSTTH
T ss_pred ccHHHHHHHhhCCCCE---EEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHHHhhhhhhHH
Confidence 45555555443 222 22337788999988765 677777777754334 568899999999988876554435
Q ss_pred HHHHhhcccCCcEEEE
Q 009719 217 LIEVDRLLRPGGYLVI 232 (527)
Q Consensus 217 L~Ei~RVLRPGG~lvi 232 (527)
+.++..-|+|||.+|-
T Consensus 219 g~~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 219 GWEVIDIVNSPNIVVT 234 (281)
T ss_dssp HHHHHHHSSCSEEEEE
T ss_pred HHHHHHHhCCCCEEEe
Confidence 5599999999998874
No 493
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=91.41 E-value=0.2 Score=52.40 Aligned_cols=71 Identities=14% Similarity=0.159 Sum_probs=50.0
Q ss_pred cChHHHHHHHHH----cCC---CcEEeeccccCCCCCCCcccEEEecCcccc--cccCh--------------HHHHHHH
Q 009719 164 DSHKAQIQFALE----RGI---PAFVAMLGTRRLPFPAFSFDIVHCSRCLIP--FTAYN--------------ATYLIEV 220 (527)
Q Consensus 164 D~seaqvq~A~e----Rg~---pa~~~v~dae~LPFpD~SFDlV~cs~~l~h--w~d~~--------------~~aL~Ei 220 (527)
|.++.+++.|+. +|+ ...+..+|+...+.. ..||+|++.--+.+ +.+.. ..++.++
T Consensus 215 Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 293 (445)
T 2okc_A 215 DNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHM 293 (445)
T ss_dssp ESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHH
Confidence 556677777764 465 456777888777665 38999999843333 21111 2489999
Q ss_pred hhcccCCcEEEEecC
Q 009719 221 DRLLRPGGYLVISGP 235 (527)
Q Consensus 221 ~RVLRPGG~lviS~p 235 (527)
.++|||||++++..|
T Consensus 294 ~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 294 MLMLKTGGRAAVVLP 308 (445)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhccCCEEEEEEC
Confidence 999999999998876
No 494
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=91.18 E-value=0.074 Score=55.40 Aligned_cols=91 Identities=12% Similarity=0.054 Sum_probs=55.5
Q ss_pred hhccccccccCCeeEEeeccCcChHHHHHHHHHcCC-------------CcEEeeccccC-CC-C--CCCcccEEEecCc
Q 009719 143 VASFGGSMLSENILTLSFAPRDSHKAQIQFALERGI-------------PAFVAMLGTRR-LP-F--PAFSFDIVHCSRC 205 (527)
Q Consensus 143 vgsfga~Ll~r~V~~msiAp~D~seaqvq~A~eRg~-------------pa~~~v~dae~-LP-F--pD~SFDlV~cs~~ 205 (527)
.|..+.+++.++.. .+...|.++++++.|++.-. ...+..+|+.. |. + +++.||+|++...
T Consensus 199 ~G~~arellk~~~~--~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~ 276 (364)
T 2qfm_A 199 DGGILCEIVKLKPK--MVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLT 276 (364)
T ss_dssp TCHHHHHHHTTCCS--EEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECC
T ss_pred hhHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCC
Confidence 34444455666542 33344677899999987621 13556677544 22 1 4688999998643
Q ss_pred cccccc-----ChHHHHHHH----hhcccCCcEEEEecC
Q 009719 206 LIPFTA-----YNATYLIEV----DRLLRPGGYLVISGP 235 (527)
Q Consensus 206 l~hw~d-----~~~~aL~Ei----~RVLRPGG~lviS~p 235 (527)
-++... ....+++++ .|+|+|||.+++...
T Consensus 277 d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 277 AVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp SSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 212211 112366776 899999999998553
No 495
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=91.06 E-value=0.08 Score=52.20 Aligned_cols=22 Identities=9% Similarity=0.199 Sum_probs=18.7
Q ss_pred eeeEeecCCCccchhhhccCCC
Q 009719 374 IRNIMDMNAFFGGFAAALTSDP 395 (527)
Q Consensus 374 iRnvmDm~ag~GgFaAaL~~~~ 395 (527)
-.+|||+|||.|.++.+|.+..
T Consensus 29 ~~~VLDiG~G~G~lt~~L~~~~ 50 (285)
T 1zq9_A 29 TDVVLEVGPGTGNMTVKLLEKA 50 (285)
T ss_dssp TCEEEEECCTTSTTHHHHHHHS
T ss_pred CCEEEEEcCcccHHHHHHHhhC
Confidence 3589999999999999997654
No 496
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=90.75 E-value=0.18 Score=50.79 Aligned_cols=139 Identities=12% Similarity=0.079 Sum_probs=76.5
Q ss_pred HHHHhhhccCCCCeeeEeecCCCccchhhhccCC----CeeEEEecCCCCCCchhHhhhc----cccccccccCC-CCCC
Q 009719 361 YKNTLNVKLGTPAIRNIMDMNAFFGGFAAALTSD----PVWVMNVVPARKSSTLSVIYDR----GLIGVYHDWCE-PFST 431 (527)
Q Consensus 361 Y~~~l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~----~VwvMnvvp~~~~ntl~vi~eR----GLiG~~hdwce-~fst 431 (527)
|-..+. .+ +...+|||+|||+|-||.++... .||-+-|-+ .-+.++-++ |+-+.+ .++. .-.+
T Consensus 123 Y~~i~~-~i--~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~----~~le~a~~~l~~~g~~~~~-~v~D~~~~~ 194 (281)
T 3lcv_B 123 YRELFR-HL--PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDA----RLVGFVDEALTRLNVPHRT-NVADLLEDR 194 (281)
T ss_dssp HHHHGG-GS--CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBH----HHHHHHHHHHHHTTCCEEE-EECCTTTSC
T ss_pred HHHHHh-cc--CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCH----HHHHHHHHHHHhcCCCceE-EEeeecccC
Confidence 554333 33 44789999999999999999665 356554421 233333332 443322 1121 1233
Q ss_pred CCCccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCC-----------HHHHHHHHHHHhcCCcee
Q 009719 432 YPRTYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDS-----------PEVIDKVSRIANTVRWTA 500 (527)
Q Consensus 432 YPrtyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~-----------~~~~~~i~~i~~~l~W~~ 500 (527)
-|-+||++=+.-+.-... .+.. . .++++=..|+|+|.||--+. ..+-...++.+..--|.+
T Consensus 195 p~~~~DvaL~lkti~~Le---~q~k----g-~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~ 266 (281)
T 3lcv_B 195 LDEPADVTLLLKTLPCLE---TQQR----G-SGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRI 266 (281)
T ss_dssp CCSCCSEEEETTCHHHHH---HHST----T-HHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCE
T ss_pred CCCCcchHHHHHHHHHhh---hhhh----H-HHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCce
Confidence 457888863322222121 0111 1 23366678999999998875 235666777776666655
Q ss_pred EEecCCCCCCCCceEEEEEe
Q 009719 501 AVHDKEPGSNGREKILVATK 520 (527)
Q Consensus 501 ~~~~~e~~~~~~ekiLi~~K 520 (527)
..... ..|-+.|.+|
T Consensus 267 ~~~~~-----~nEl~y~i~k 281 (281)
T 3lcv_B 267 QRLEI-----GNELIYVIQK 281 (281)
T ss_dssp EEEEE-----TTEEEEEEC-
T ss_pred eeeee-----cCeeEEEecC
Confidence 44322 3566666554
No 497
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=90.59 E-value=0.036 Score=59.03 Aligned_cols=22 Identities=14% Similarity=0.151 Sum_probs=19.2
Q ss_pred ccccceeecccccCCcEEEEeC
Q 009719 460 LVDLMVEMDRMLRPEGTVVVRD 481 (527)
Q Consensus 460 ~~~illEmDRILRP~G~~iird 481 (527)
+...|.||-|+|+|||.+|+.+
T Consensus 267 l~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 267 VDHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp HHHHHHHHHTTSCTTCEEEESS
T ss_pred HHHHHHHHHHcCCCCcEEEEee
Confidence 3567789999999999999986
No 498
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=90.58 E-value=0.083 Score=52.02 Aligned_cols=118 Identities=11% Similarity=0.131 Sum_probs=71.2
Q ss_pred hhhccCCCCeeeEeecCCCccchhhhccCC-C---eeEEEecCCCCCCchhHhh----hccccc---c-ccccCCCCCCC
Q 009719 365 LNVKLGTPAIRNIMDMNAFFGGFAAALTSD-P---VWVMNVVPARKSSTLSVIY----DRGLIG---V-YHDWCEPFSTY 432 (527)
Q Consensus 365 l~~~i~~~~iRnvmDm~ag~GgFaAaL~~~-~---VwvMnvvp~~~~ntl~vi~----eRGLiG---~-~hdwce~fstY 432 (527)
+...+..+ -.|+|+|||.|-++.+|... + |+-+-+.| .-+..+- ..|+-. + ..|.-+.+.
T Consensus 15 i~~~v~~g--~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~----~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~-- 86 (244)
T 3gnl_A 15 VASYITKN--ERIADIGSDHAYLPCFAVKNQTASFAIAGEVVD----GPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE-- 86 (244)
T ss_dssp HHTTCCSS--EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSH----HHHHHHHHHHHHTTCTTTEEEEECSGGGGCC--
T ss_pred HHHhCCCC--CEEEEECCccHHHHHHHHHhCCCCEEEEEECCH----HHHHHHHHHHHHcCCCceEEEEecchhhccC--
Confidence 44455555 47999999999999998654 3 33333332 2233332 235522 1 123333332
Q ss_pred CC-ccchhhhcCccccccCCCCCCCCCcccccceeecccccCCcEEEEeCCHHHHHHHHHHHhcCCceeEE
Q 009719 433 PR-TYDLIHVSGIESLIKNPGSNKNSCSLVDLMVEMDRMLRPEGTVVVRDSPEVIDKVSRIANTVRWTAAV 502 (527)
Q Consensus 433 Pr-tyDLiHa~~~fs~~~~~~~~~~rC~~~~illEmDRILRP~G~~iird~~~~~~~i~~i~~~l~W~~~~ 502 (527)
|. .||+|=..+. .+-.|..||-+.-+.|.|+|++|++-.. -...+++.+...-|.+.-
T Consensus 87 ~~~~~D~Iviagm-----------Gg~lI~~IL~~~~~~L~~~~~lIlq~~~-~~~~lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 87 KKDAIDTIVIAGM-----------GGTLIRTILEEGAAKLAGVTKLILQPNI-AAWQLREWSEQNNWLITS 145 (244)
T ss_dssp GGGCCCEEEEEEE-----------CHHHHHHHHHHTGGGGTTCCEEEEEESS-CHHHHHHHHHHHTEEEEE
T ss_pred ccccccEEEEeCC-----------chHHHHHHHHHHHHHhCCCCEEEEEcCC-ChHHHHHHHHHCCCEEEE
Confidence 33 4786532221 1223456777888899999999999754 356788888888898743
No 499
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=90.09 E-value=0.23 Score=49.93 Aligned_cols=54 Identities=15% Similarity=0.071 Sum_probs=39.3
Q ss_pred EEeeccccCCCCCCCcccEEEecCcc---cccccChH--HHHHHHhhcccCC-cEEEEec
Q 009719 181 FVAMLGTRRLPFPAFSFDIVHCSRCL---IPFTAYNA--TYLIEVDRLLRPG-GYLVISG 234 (527)
Q Consensus 181 ~~~v~dae~LPFpD~SFDlV~cs~~l---~hw~d~~~--~aL~Ei~RVLRPG-G~lviS~ 234 (527)
.....+++-..++++.||+|+|..+. ++|.|... .+|..+.++|||| |.|++..
T Consensus 125 i~~~~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KV 184 (277)
T 3evf_A 125 ITFKDKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKV 184 (277)
T ss_dssp EEEECSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred EEEeccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 33445556678889999999998743 23544433 2578889999999 9999965
No 500
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=89.99 E-value=0.51 Score=45.73 Aligned_cols=108 Identities=13% Similarity=0.040 Sum_probs=65.2
Q ss_pred hccccccccCCeeEEeeccCcChHHHHHHHHHc----CCC--cEEeeccc-cCCCCCCCcccEEEecCcccccccChHHH
Q 009719 144 ASFGGSMLSENILTLSFAPRDSHKAQIQFALER----GIP--AFVAMLGT-RRLPFPAFSFDIVHCSRCLIPFTAYNATY 216 (527)
Q Consensus 144 gsfga~Ll~r~V~~msiAp~D~seaqvq~A~eR----g~p--a~~~v~da-e~LPFpD~SFDlV~cs~~l~hw~d~~~~a 216 (527)
|..+.+|...+.. ..+...|.++..++.|+++ |+. +.+..+|. +.+|.. ..||+|+.+...-. .-...
T Consensus 27 G~l~i~la~~~~~-~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~-~~~D~IviaG~Gg~---~i~~I 101 (225)
T 3kr9_A 27 AYLPIELVERGQI-KSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEET-DQVSVITIAGMGGR---LIARI 101 (225)
T ss_dssp THHHHHHHHTTSE-EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG-GCCCEEEEEEECHH---HHHHH
T ss_pred HHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccC-cCCCEEEEcCCChH---HHHHH
Confidence 4444445555421 1233347788888888754 554 45666665 445432 26998886543211 11237
Q ss_pred HHHHhhcccCCcEEEEecCCCCCCCchhHHHHHHHHHHhcceEEeeee
Q 009719 217 LIEVDRLLRPGGYLVISGPPVQWPKQDKEWADLQAVARALCYELIAVD 264 (527)
Q Consensus 217 L~Ei~RVLRPGG~lviS~pp~~~~~~~~~w~~i~~l~~~mcW~~~~~~ 264 (527)
|.+....|+|||+|+++.- . .-..+.+......|....+.
T Consensus 102 l~~~~~~L~~~~~lVlq~~--~------~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 102 LEEGLGKLANVERLILQPN--N------REDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp HHHTGGGCTTCCEEEEEES--S------CHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHhCCCCEEEEECC--C------CHHHHHHHHHHCCCEEEEEE
Confidence 8899999999999999865 1 12345555566778887763
Done!