Query 009724
Match_columns 527
No_of_seqs 170 out of 1167
Neff 7.1
Searched_HMMs 13730
Date Mon Mar 25 11:36:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009724.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009724hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axtl1 f.23.31.1 (L:1-37) Pho 8.3 1.3E+02 0.0093 18.2 2.5 15 235-249 18-32 (37)
2 d1q90m_ f.23.25.1 (M:) PetM su 4.6 2.3E+02 0.016 16.5 2.1 14 473-486 2-15 (34)
3 d1zava1 d.58.62.1 (A:1-177) Ri 3.7 2.7E+02 0.02 22.5 2.9 29 306-334 127-155 (177)
4 d1zcea1 b.122.1.8 (A:2-147) Hy 3.4 1.4E+02 0.01 23.9 0.7 16 296-311 34-49 (146)
5 d1q25a2 b.64.1.1 (A:130-280) C 3.1 2.1E+02 0.015 22.3 1.4 19 114-132 8-26 (151)
6 d2vv5a3 f.34.1.1 (A:27-112) Me 2.9 3.1E+02 0.023 19.0 2.1 15 475-489 70-84 (86)
7 d1x3ha2 g.39.1.3 (A:43-74) Leu 2.8 2.4E+02 0.017 16.6 1.1 17 108-124 7-23 (32)
8 d1ymga1 f.19.1.1 (A:6-239) Aqu 2.8 2.6E+02 0.019 23.7 1.9 18 320-337 86-103 (234)
9 d2evea1 b.122.1.8 (A:2-149) Hy 2.8 2E+02 0.015 23.1 1.0 15 296-310 31-45 (148)
10 d2gbsa1 b.122.1.8 (A:2-137) Hy 2.8 2.1E+02 0.015 22.6 1.0 15 296-310 33-47 (136)
No 1
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=8.25 E-value=1.3e+02 Score=18.17 Aligned_cols=15 Identities=27% Similarity=0.671 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHH
Q 009724 235 WWGMLFAFALAWIVT 249 (527)
Q Consensus 235 ~~~~ilal~l~~vf~ 249 (527)
.|++++..+++.+|+
T Consensus 18 y~GlLlifvl~vLFs 32 (37)
T d2axtl1 18 YLGLLLILVLALLFS 32 (37)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 566666666666665
No 2
>d1q90m_ f.23.25.1 (M:) PetM subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=4.62 E-value=2.3e+02 Score=16.45 Aligned_cols=14 Identities=43% Similarity=0.339 Sum_probs=10.4
Q ss_pred hhhhhhhHHHHHHH
Q 009724 473 AALDAGTAFMGVLL 486 (527)
Q Consensus 473 agL~aG~ai~gli~ 486 (527)
|++++|+++..+-+
T Consensus 2 a~fiagta~tmig~ 15 (34)
T d1q90m_ 2 AEFIAGTALTMVGM 15 (34)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CceecchhHHHHHH
Confidence 67889998876544
No 3
>d1zava1 d.58.62.1 (A:1-177) Ribosomal protein L10 {Thermotoga maritima [TaxId: 2336]}
Probab=3.68 E-value=2.7e+02 Score=22.45 Aligned_cols=29 Identities=24% Similarity=0.408 Sum_probs=23.2
Q ss_pred chhhhcCCChhhHHHHHhhhhhhhHHHHH
Q 009724 306 KLGHYMKIPPRCMYTAQLVGTIVSGVVNL 334 (527)
Q Consensus 306 K~G~y~~~pPR~~f~~Q~iGtivg~~v~~ 334 (527)
++-.+.+.|+|...++|++|.+-+..-+.
T Consensus 127 ~i~~la~LPs~eel~a~l~~~L~ap~~~l 155 (177)
T d1zava1 127 EVENIAKLPSKEELYAMLVGRVKAPITGL 155 (177)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHhHHHHH
Confidence 34567889999999999999988765443
No 4
>d1zcea1 b.122.1.8 (A:2-147) Hypothetical protein Atu2648 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=3.45 E-value=1.4e+02 Score=23.95 Aligned_cols=16 Identities=19% Similarity=0.231 Sum_probs=13.9
Q ss_pred HHHHhhhhccchhhhc
Q 009724 296 IHALSFLSDLKLGHYM 311 (527)
Q Consensus 296 ~qa~~~~~DlK~G~y~ 311 (527)
.||.+++.|+|.|.+.
T Consensus 34 yqArn~lr~Mk~GD~~ 49 (146)
T d1zcea1 34 YQARNNMRAMKIGDKG 49 (146)
T ss_dssp HHHHHHHHTCCTTCEE
T ss_pred HHHHHHHHhccCCCEE
Confidence 5999999999999764
No 5
>d1q25a2 b.64.1.1 (A:130-280) Cation-independent mannose-6-phosphate receptor (MIR-receptor) {Cow (Bos taurus) [TaxId: 9913]}
Probab=3.10 E-value=2.1e+02 Score=22.25 Aligned_cols=19 Identities=16% Similarity=0.188 Sum_probs=14.2
Q ss_pred cccccCCceeeceeecCCC
Q 009724 114 QLFTSSGHKYDTTKILTPQ 132 (527)
Q Consensus 114 ~~fd~~g~~yn~s~il~~~ 132 (527)
.++|.+|+.||.+.+.+.+
T Consensus 8 ~v~d~~g~~fDLspL~~~~ 26 (151)
T d1q25a2 8 YAFDRELKKHDLNPLIKTS 26 (151)
T ss_dssp EEECTTCCEEECGGGCCSS
T ss_pred EEECCCCCEEeCchhhccC
Confidence 3577888899988887543
No 6
>d2vv5a3 f.34.1.1 (A:27-112) Mechanosensitive channel protein MscS (YggB), transmembrane region {Escherichia coli [TaxId: 562]}
Probab=2.89 E-value=3.1e+02 Score=19.00 Aligned_cols=15 Identities=20% Similarity=0.102 Sum_probs=6.0
Q ss_pred hhhhhHHHHHHHHHH
Q 009724 475 LDAGTAFMGVLLFFA 489 (527)
Q Consensus 475 L~aG~ai~gli~~~~ 489 (527)
+.++.++.|+.+.|+
T Consensus 70 l~a~~G~~gvaiGfa 84 (86)
T d2vv5a3 70 VIAVLGAAGLVVGLA 84 (86)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 333444444444333
No 7
>d1x3ha2 g.39.1.3 (A:43-74) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.84 E-value=2.4e+02 Score=16.63 Aligned_cols=17 Identities=12% Similarity=0.282 Sum_probs=11.5
Q ss_pred CCCCcccccccCCceee
Q 009724 108 FPIFSNQLFTSSGHKYD 124 (527)
Q Consensus 108 ~P~~s~~~fd~~g~~yn 124 (527)
-||.+.+-|.-+|++|-
T Consensus 7 ~PF~~~~Fy~~~g~PyC 23 (32)
T d1x3ha2 7 TSFSTGSFFELDGRPFC 23 (32)
T ss_dssp CBSCSSCCEESSSCEEC
T ss_pred CcCCCCCeEeECCccch
Confidence 46766677777777663
No 8
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}
Probab=2.83 E-value=2.6e+02 Score=23.66 Aligned_cols=18 Identities=33% Similarity=0.503 Sum_probs=14.8
Q ss_pred HHHhhhhhhhHHHHHHHH
Q 009724 320 TAQLVGTIVSGVVNLGVA 337 (527)
Q Consensus 320 ~~Q~iGtivg~~v~~~v~ 337 (527)
.+|++|.++|+.+...++
T Consensus 86 ~aQ~lGa~~ga~l~~~~~ 103 (234)
T d1ymga1 86 VAQLLGAVAGAAVLYSVT 103 (234)
T ss_dssp HHHHHHHHHHHHHHHHHS
T ss_pred ehHHHHHHHHHHHHHHHc
Confidence 799999999998776554
No 9
>d2evea1 b.122.1.8 (A:2-149) Hypothetical protein PSPTO5229 {Pseudomonas syringae [TaxId: 317]}
Probab=2.82 E-value=2e+02 Score=23.06 Aligned_cols=15 Identities=27% Similarity=0.363 Sum_probs=13.1
Q ss_pred HHHHhhhhccchhhh
Q 009724 296 IHALSFLSDLKLGHY 310 (527)
Q Consensus 296 ~qa~~~~~DlK~G~y 310 (527)
.||.+++.|+|.|-.
T Consensus 31 yqArn~lr~M~~GD~ 45 (148)
T d2evea1 31 YQARNFLRTMAEGDE 45 (148)
T ss_dssp HHHHHHHHHCCTTCE
T ss_pred HHHHHHHHhcccCCE
Confidence 499999999999964
No 10
>d2gbsa1 b.122.1.8 (A:2-137) Hypothetical protein RPA0253 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=2.80 E-value=2.1e+02 Score=22.62 Aligned_cols=15 Identities=13% Similarity=0.129 Sum_probs=13.2
Q ss_pred HHHHhhhhccchhhh
Q 009724 296 IHALSFLSDLKLGHY 310 (527)
Q Consensus 296 ~qa~~~~~DlK~G~y 310 (527)
.||.++|.|+|.|-.
T Consensus 33 yqArn~mr~M~~GD~ 47 (136)
T d2gbsa1 33 HSAKLHMVAMRRGDR 47 (136)
T ss_dssp HHHHHHHHHCCTTCE
T ss_pred HHHHHHHHHhccCCE
Confidence 589999999999965
Done!