Query 009726
Match_columns 527
No_of_seqs 307 out of 1576
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 11:39:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009726.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009726hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ig6_A MRF-2, modulator recogn 99.9 8E-28 2.7E-32 208.7 5.5 103 234-336 2-105 (107)
2 2eqy_A RBP2 like, jumonji, at 99.9 2.4E-26 8.2E-31 204.5 10.7 103 230-333 8-110 (122)
3 2jxj_A Histone demethylase jar 99.9 1.2E-26 4.2E-31 197.4 6.9 94 231-325 3-96 (96)
4 2kk0_A AT-rich interactive dom 99.9 2.1E-26 7.1E-31 210.5 7.7 116 211-326 9-126 (145)
5 2cxy_A BAF250B subunit, HBAF25 99.9 1.3E-26 4.4E-31 206.7 6.1 107 227-334 13-120 (125)
6 2jrz_A Histone demethylase jar 99.9 2.5E-26 8.6E-31 202.9 7.9 95 231-326 7-101 (117)
7 2lm1_A Lysine-specific demethy 99.9 2.9E-26 9.8E-31 198.6 7.6 96 230-326 10-105 (107)
8 1c20_A DEAD ringer protein; DN 99.9 3.6E-26 1.2E-30 204.4 7.6 97 230-326 17-114 (128)
9 2rq5_A Protein jumonji; develo 99.9 1.1E-25 3.8E-30 200.9 8.6 88 237-324 14-102 (121)
10 2li6_A SWI/SNF chromatin-remod 99.9 8.9E-25 3E-29 192.6 7.8 94 228-326 12-106 (116)
11 1kkx_A Transcription regulator 99.9 1.5E-24 5.2E-29 193.7 7.5 92 230-326 13-105 (123)
12 4fei_A Heat shock protein-rela 99.8 3.7E-20 1.3E-24 158.2 13.6 85 440-526 8-96 (102)
13 3gla_A Low molecular weight he 99.8 2.8E-20 9.7E-25 157.2 12.5 85 440-526 6-99 (100)
14 3l1e_A Alpha-crystallin A chai 99.8 8.4E-20 2.9E-24 157.8 11.9 84 441-526 5-91 (106)
15 3q9p_A Heat shock protein beta 99.8 8.5E-20 2.9E-24 151.9 11.1 82 443-525 2-85 (85)
16 2wj5_A Heat shock protein beta 99.8 6.2E-20 2.1E-24 157.2 10.0 84 441-526 4-90 (101)
17 4eld_A MJ16.5-P1, small heat s 99.8 4.4E-19 1.5E-23 162.8 12.6 87 437-525 55-151 (161)
18 3aab_A Putative uncharacterize 99.8 8.4E-19 2.9E-23 154.2 12.1 85 438-525 24-116 (123)
19 2y1y_A Alpha-crystallin B chai 99.8 1.9E-18 6.3E-23 144.8 9.6 81 444-526 2-85 (90)
20 1gme_A Heat shock protein 16.9 99.8 4.4E-18 1.5E-22 155.3 11.9 87 439-526 44-139 (151)
21 2klr_A Alpha-crystallin B chai 99.7 4.7E-18 1.6E-22 159.5 8.4 83 441-525 66-151 (175)
22 2bol_A TSP36, small heat shock 99.7 8.5E-17 2.9E-21 163.3 11.8 88 438-526 98-190 (314)
23 2bol_A TSP36, small heat shock 99.6 3.3E-15 1.1E-19 151.6 10.0 83 440-524 222-313 (314)
24 2xcm_C SGT1-like protein, cyto 98.7 6.9E-08 2.4E-12 79.5 9.1 80 439-526 3-82 (92)
25 1rl1_A Suppressor of G2 allele 98.7 6.2E-08 2.1E-12 83.3 9.1 80 439-526 10-89 (114)
26 2k8q_A Protein SHQ1; beta-sand 97.3 0.0007 2.4E-08 61.6 8.3 75 440-526 5-83 (134)
27 3eud_A Protein SHQ1; CS domain 96.9 0.0084 2.9E-07 53.3 11.5 76 439-526 18-97 (115)
28 1x5m_A Calcyclin-binding prote 96.8 0.014 4.9E-07 51.2 11.7 79 440-526 22-104 (127)
29 1wh0_A Ubiquitin carboxyl-term 96.7 0.0082 2.8E-07 54.0 9.6 86 439-526 20-112 (134)
30 3igf_A ALL4481 protein; two-do 96.2 0.0074 2.5E-07 62.3 7.4 62 449-523 306-368 (374)
31 1wgv_A KIAA1068 protein; CS do 96.0 0.066 2.2E-06 46.8 11.6 80 438-525 19-101 (124)
32 3qor_A Nuclear migration prote 95.7 0.056 1.9E-06 47.3 9.5 79 436-525 14-96 (121)
33 2o30_A Nuclear movement protei 95.6 0.06 2.1E-06 47.6 9.6 73 440-524 6-79 (131)
34 1ejf_A Progesterone receptor P 95.6 0.052 1.8E-06 47.6 9.0 77 440-525 5-81 (125)
35 1wfi_A Nuclear distribution ge 95.4 0.046 1.6E-06 48.2 8.0 77 438-525 7-87 (131)
36 2rh0_A NUDC domain-containing 95.1 0.1 3.5E-06 47.8 9.5 76 439-526 14-91 (157)
37 2kmw_A Uncharacterized protein 94.6 0.066 2.3E-06 48.9 7.0 77 440-526 6-82 (150)
38 2cg9_X CO-chaperone protein SB 94.6 0.016 5.6E-07 51.7 2.8 81 441-525 9-97 (134)
39 1gvd_A MYB proto-oncogene prot 77.0 1.9 6.5E-05 32.0 3.2 39 268-318 13-51 (52)
40 1guu_A C-MYB, MYB proto-oncoge 74.8 2.8 9.7E-05 30.9 3.7 39 268-318 13-51 (52)
41 2dim_A Cell division cycle 5-l 73.6 2.6 8.9E-05 33.1 3.4 39 268-318 19-57 (70)
42 1x41_A Transcriptional adaptor 73.0 3.5 0.00012 31.6 3.9 38 268-317 18-55 (60)
43 1ity_A TRF1; helix-turn-helix, 70.9 5.1 0.00017 31.4 4.5 41 268-318 20-60 (69)
44 2elk_A SPCC24B10.08C protein; 69.5 5.9 0.0002 30.2 4.5 39 268-317 19-57 (58)
45 2d9a_A B-MYB, MYB-related prot 67.9 4.2 0.00014 30.9 3.4 39 268-318 18-56 (60)
46 2yum_A ZZZ3 protein, zinc fing 59.7 6.9 0.00024 31.0 3.3 46 268-320 18-63 (75)
47 1w0t_A Telomeric repeat bindin 57.7 14 0.00049 27.3 4.6 39 268-316 12-50 (53)
48 2cu7_A KIAA1915 protein; nucle 56.4 19 0.00066 28.3 5.4 42 268-322 19-60 (72)
49 2din_A Cell division cycle 5-l 53.0 18 0.00063 27.9 4.7 41 268-322 19-59 (66)
50 2k9n_A MYB24; R2R3 domain, DNA 50.1 12 0.00041 31.6 3.4 39 268-318 11-49 (107)
51 3sjm_A Telomeric repeat-bindin 47.6 28 0.00095 27.2 5.0 40 268-317 21-60 (64)
52 1gv2_A C-MYB, MYB proto-oncoge 45.5 14 0.00049 30.7 3.2 38 268-317 14-51 (105)
53 2yus_A SWI/SNF-related matrix- 44.9 13 0.00045 30.4 2.8 35 268-315 28-62 (79)
54 2yrv_A AT-rich interactive dom 37.9 8.1 0.00028 34.5 0.5 23 175-199 94-116 (117)
55 2lpy_A Matrix protein P10; GAG 37.0 66 0.0022 28.9 6.2 81 234-321 5-94 (124)
56 2k9n_A MYB24; R2R3 domain, DNA 36.5 51 0.0017 27.6 5.2 44 267-323 62-105 (107)
57 1h8a_C AMV V-MYB, MYB transfor 33.9 31 0.001 29.8 3.5 39 267-317 36-74 (128)
58 4fei_A Heat shock protein-rela 33.6 1.2E+02 0.0041 24.9 7.0 34 449-483 62-96 (102)
59 3q9p_A Heat shock protein beta 32.5 51 0.0017 26.5 4.4 31 491-523 8-38 (85)
60 1gv2_A C-MYB, MYB proto-oncoge 31.2 51 0.0017 27.3 4.3 38 267-317 65-102 (105)
61 2cqq_A RSGI RUH-037, DNAJ homo 30.6 62 0.0021 26.0 4.6 29 285-319 31-59 (72)
62 1fex_A TRF2-interacting telome 30.3 45 0.0015 25.8 3.5 46 268-317 12-58 (59)
63 2cqr_A RSGI RUH-043, DNAJ homo 29.4 55 0.0019 26.4 4.0 28 285-317 41-68 (73)
64 1xg7_A Hypothetical protein; s 27.2 40 0.0014 33.5 3.4 51 285-335 135-185 (250)
65 2y1y_A Alpha-crystallin B chai 27.0 67 0.0023 26.0 4.3 31 491-523 7-37 (90)
66 1xqo_A 8-oxoguanine DNA glycos 26.9 44 0.0015 33.3 3.7 51 285-335 123-173 (256)
67 3osg_A MYB21; transcription-DN 25.8 52 0.0018 28.4 3.6 37 268-317 21-57 (126)
68 3zqc_A MYB3; transcription-DNA 25.4 62 0.0021 28.0 4.0 39 268-319 64-102 (131)
69 2wj5_A Heat shock protein beta 25.1 73 0.0025 26.4 4.3 31 491-523 12-42 (101)
70 3zqc_A MYB3; transcription-DNA 23.8 46 0.0016 28.9 2.8 39 268-318 12-50 (131)
71 2cjj_A Radialis; plant develop 23.7 1.7E+02 0.0058 24.6 6.3 34 285-323 31-64 (93)
72 1h89_C C-MYB, MYB proto-oncoge 20.7 72 0.0025 28.4 3.6 39 267-317 67-105 (159)
No 1
>1ig6_A MRF-2, modulator recognition factor 2; DNA binding protein, DNA-binding motif, protein-DNA interaction; NMR {Homo sapiens} SCOP: a.4.3.1 PDB: 2oeh_A
Probab=99.94 E-value=8e-28 Score=208.75 Aligned_cols=103 Identities=22% Similarity=0.468 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCC-CCCeeCCeeechhhHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHH
Q 009726 234 EEQSSFMEELENFFRDRSMEF-KPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFY 312 (527)
Q Consensus 234 eEr~~Fl~~L~~F~e~RGtp~-k~P~IgGK~LDLykLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~Y 312 (527)
++++.|+++|.+||+.+|+++ ++|+|+|++||||+||++|+++|||++||++++|.+||+.||++.+++++++.||++|
T Consensus 2 ~e~~~Fl~~L~~F~~~rg~~~~~~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~~s~~~~Lk~~Y 81 (107)
T 1ig6_A 2 ADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHY 81 (107)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGCCCSSSSSCCHHHHHHHHHHTTHHHHHHHHTTHHHHHHHHTCCTTCTTTTTTHHHHH
T ss_pred chHHHHHHHHHHHHHHcCCCCCcCceECCEeecHHHHHHHHHHhcCHHHhcccCcHHHHHHHhCCCCCCCcHHHHHHHHH
Confidence 578999999999999999999 7999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHhhhhcCCCCCCCcccC
Q 009726 313 EKALLDYERHKTSGGELSLPVASQ 336 (527)
Q Consensus 313 eKyLlpYE~~~~~~ge~~~Pi~s~ 336 (527)
++||++||+++.+....++|...+
T Consensus 82 ~k~L~~yE~~~~~~~~~~~p~~~~ 105 (107)
T 1ig6_A 82 ERLILPYERFIKGEEDKPLPPIKP 105 (107)
T ss_dssp HHHTTTTHHHHHHHTSSSSCTTCS
T ss_pred HHHHHHHHHHHcCCCCCCCCCCCC
Confidence 999999999998877777776543
No 2
>2eqy_A RBP2 like, jumonji, at rich interactive domain 1B; ARID domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.93 E-value=2.4e-26 Score=204.51 Aligned_cols=103 Identities=17% Similarity=0.323 Sum_probs=95.4
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCCCCCeeCCeeechhhHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHH
Q 009726 230 SGTEEEQSSFMEELENFFRDRSMEFKPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFR 309 (527)
Q Consensus 230 ~g~~eEr~~Fl~~L~~F~e~RGtp~k~P~IgGK~LDLykLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK 309 (527)
++..+++..|+++|.+||+.||+++++|+|+|++||||+||++|+++|||++||++++|++|++.||+|. ++++++.||
T Consensus 8 e~~~~~~~~Fl~~L~~F~~~rG~~l~~P~i~gk~lDLy~Ly~~V~~~GG~~~V~~~k~W~~V~~~lg~~~-~~~~~~~Lr 86 (122)
T 2eqy_A 8 EAQTRVKLNFLDQIAKYWELQGSTLKIPHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAP-GKAVGSHIR 86 (122)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTCCCCCCBSSSSBCCHHHHHHHHHHHTCHHHHHHTTTHHHHHHHTTCCS-SSHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHcCCCCCCCeECCEeccHHHHHHHHHHccCHHHHcCCCcHHHHHHHhCCCC-CCcHHHHHH
Confidence 4578999999999999999999999999999999999999999999999999999999999999999986 468899999
Q ss_pred HHHHHhHHHHHhhhhcCCCCCCCc
Q 009726 310 GFYEKALLDYERHKTSGGELSLPV 333 (527)
Q Consensus 310 ~~YeKyLlpYE~~~~~~ge~~~Pi 333 (527)
++|+|||++||++..+....+.++
T Consensus 87 ~~Y~k~L~~yE~~~~~~~~~~~~~ 110 (122)
T 2eqy_A 87 GHYERILNPYNLFLSGDSLRCLQK 110 (122)
T ss_dssp HHHHHTHHHHHHHHHCCTTCCCCC
T ss_pred HHHHHHhHHHHHHHhcCCccccCC
Confidence 999999999999998876655443
No 3
>2jxj_A Histone demethylase jarid1A; ARID domain, chromatin regulator, developmental protein, dioxygenase, iron, metal-binding, nucleus, oxidoreductase; NMR {Homo sapiens}
Probab=99.93 E-value=1.2e-26 Score=197.37 Aligned_cols=94 Identities=23% Similarity=0.354 Sum_probs=88.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCCeeCCeeechhhHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHH
Q 009726 231 GTEEEQSSFMEELENFFRDRSMEFKPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRG 310 (527)
Q Consensus 231 g~~eEr~~Fl~~L~~F~e~RGtp~k~P~IgGK~LDLykLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~ 310 (527)
...++++.|+++|.+||++||+++++|+|+|++||||+||++|+++|||++||++++|.+|++.||+|.++ ++++.||+
T Consensus 3 ~~~r~~~~F~~~L~~F~~~~g~~l~~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~v~~~lg~~~~~-~~~~~Lk~ 81 (96)
T 2jxj_A 3 LGSRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYALSKIVASKGGFEMVTKEKKWSKVGSRLGYLPGK-GTGSLLKS 81 (96)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTCCCCCCEETTEECCCHHHHHHHHHHHTTHHHHHHTTHHHHHHHHTCCSCS-CHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHcCCCCCCCcCCCEeccHHHHHHHHHHcCCHHHHccCCcHHHHHHHhCCCCcC-cHHHHHHH
Confidence 35688999999999999999999999999999999999999999999999999999999999999998776 68899999
Q ss_pred HHHHhHHHHHhhhhc
Q 009726 311 FYEKALLDYERHKTS 325 (527)
Q Consensus 311 ~YeKyLlpYE~~~~~ 325 (527)
+|+|||++||++..+
T Consensus 82 ~Y~k~L~~yE~~~~g 96 (96)
T 2jxj_A 82 HYERILYPYELFQSG 96 (96)
T ss_dssp HHTTTTHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998753
No 4
>2kk0_A AT-rich interactive domain-containing protein 3A; DEAD ringer, AT-rich interaction domain, NESG, ARID, cytopla binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=99.93 E-value=2.1e-26 Score=210.49 Aligned_cols=116 Identities=23% Similarity=0.385 Sum_probs=104.4
Q ss_pred cccCCCCceeecCC-CCCCCCCCHHHHHHHHHHHHHHHHcCCCCC-CCCeeCCeeechhhHHHHHhhcCcceeeccCcch
Q 009726 211 EKSNSAQLFLLDGN-DEGSESGTEEEQSSFMEELENFFRDRSMEF-KPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLW 288 (527)
Q Consensus 211 ~~~~~~~sf~~~~~-~~~de~g~~eEr~~Fl~~L~~F~e~RGtp~-k~P~IgGK~LDLykLYkaV~~~GGydkVt~~KkW 288 (527)
+-..+...|.+... ..+++.+...+++.|+++|.+||+.+|+|+ ++|+|+|++||||+||++|+++|||++||++++|
T Consensus 9 ~~~~~~~~f~F~~r~q~L~eL~~~~~~~~Fl~~L~~F~~~rG~pl~~~P~i~gk~vDL~~Ly~~V~~~GG~~~V~~~~~W 88 (145)
T 2kk0_A 9 SHMPDHGDWTYEEQFKQLYELDGDPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLW 88 (145)
T ss_dssp CCSCCTTSCCCCCCCTHHHHTTCCHHHHHHHHHHHHHHHHTTCCCSSCCEETTEECCHHHHHHHHHHHTCHHHHHHHTCH
T ss_pred ccccCCCCceecCccccHhhccCchhHHHHHHHHHHHHHHcCCCCccceeECCEEecHHHHHHHHHHhCCHHHhcccCcH
Confidence 34456677888777 566666666669999999999999999999 7999999999999999999999999999999999
Q ss_pred hHHHhhcCCCCCCCcHHHHHHHHHHHhHHHHHhhhhcC
Q 009726 289 RQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTSG 326 (527)
Q Consensus 289 ~eVa~~LglP~t~tSas~~LK~~YeKyLlpYE~~~~~~ 326 (527)
++||+.||+|.+++++++.||++|+|||++||++.++.
T Consensus 89 ~~Va~~lg~~~~~tsa~~~Lk~~Y~k~L~~yE~~~~g~ 126 (145)
T 2kk0_A 89 REITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKRGL 126 (145)
T ss_dssp HHHHHHTTCCTTSTTHHHHHHHHHHHHSSHHHHHHTCC
T ss_pred HHHHHHhCCCCCcCcHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999998743
No 5
>2cxy_A BAF250B subunit, HBAF250B; DNA-binding domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Homo sapiens} PDB: 2eh9_A 1ryu_A
Probab=99.93 E-value=1.3e-26 Score=206.72 Aligned_cols=107 Identities=21% Similarity=0.369 Sum_probs=95.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCCCC-CCCeeCCeeechhhHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHH
Q 009726 227 GSESGTEEEQSSFMEELENFFRDRSMEF-KPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVS 305 (527)
Q Consensus 227 ~de~g~~eEr~~Fl~~L~~F~e~RGtp~-k~P~IgGK~LDLykLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas 305 (527)
+++.+...+++.|+++|.+||+.||+++ ++|+|+|++||||+||++|+++|||++||++++|++||+.||++. +++++
T Consensus 13 L~el~~~~~~~~Fl~~L~~F~~~rG~~~~~~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~-~~s~~ 91 (125)
T 2cxy_A 13 VYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGT-SSSAA 91 (125)
T ss_dssp HHHSCCCTTHHHHHHHHHHHHHHTTCCCCBCCEETTEECCHHHHHHHHHHHTSHHHHHHHTCHHHHHHHTTSCS-SHHHH
T ss_pred HHhccCchhHHHHHHHHHHHHHHcCCCCCCCeeECCEeecHHHHHHHHHHcCCHHHhcccCcHHHHHHHhCCCC-CCcHH
Confidence 3333334456679999999999999999 699999999999999999999999999999999999999999985 57899
Q ss_pred HHHHHHHHHhHHHHHhhhhcCCCCCCCcc
Q 009726 306 WTFRGFYEKALLDYERHKTSGGELSLPVA 334 (527)
Q Consensus 306 ~~LK~~YeKyLlpYE~~~~~~ge~~~Pi~ 334 (527)
+.||++|+|||++||+++..+++.+.+|-
T Consensus 92 ~~Lk~~Y~k~L~~yE~~~~~g~~~p~~i~ 120 (125)
T 2cxy_A 92 SSLKKQYIQYLFAFECKIERGEEPPPEVF 120 (125)
T ss_dssp HHHHHHHHHHTHHHHHHHHHCCCCCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChhHh
Confidence 99999999999999999988887765554
No 6
>2jrz_A Histone demethylase jarid1C; bright/ARID domain, helical, structural genomics, structural genomics consortium, SGC, oxidoreductase; NMR {Homo sapiens} PDB: 2yqe_A
Probab=99.93 E-value=2.5e-26 Score=202.91 Aligned_cols=95 Identities=19% Similarity=0.413 Sum_probs=90.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCCeeCCeeechhhHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHH
Q 009726 231 GTEEEQSSFMEELENFFRDRSMEFKPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRG 310 (527)
Q Consensus 231 g~~eEr~~Fl~~L~~F~e~RGtp~k~P~IgGK~LDLykLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~ 310 (527)
+..+++..|+++|.+||+.||+++++|+|+|++||||+||++|+++|||++||++++|++||+.||+|.+ +++++.||+
T Consensus 7 ~~~r~~~~Fl~~L~~F~~~rG~~l~~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~-~~a~~~Lk~ 85 (117)
T 2jrz_A 7 AQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVVEEGGYEAICKDRRWARVAQRLNYPPG-KNIGSLLRS 85 (117)
T ss_dssp TSTTTHHHHHHHHHHHHHTTTSCCCCCEETTEECCHHHHHHHHHHHTCHHHHHHTTTHHHHHHHTTCCTT-CTHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCeECCEeecHHHHHHHHHHccCHHHhcccCcHHHHHHHhCCCCC-CcHHHHHHH
Confidence 4678889999999999999999999999999999999999999999999999999999999999999877 789999999
Q ss_pred HHHHhHHHHHhhhhcC
Q 009726 311 FYEKALLDYERHKTSG 326 (527)
Q Consensus 311 ~YeKyLlpYE~~~~~~ 326 (527)
+|+|||++||++..+.
T Consensus 86 ~Y~k~L~~yE~~~~~~ 101 (117)
T 2jrz_A 86 HYERIVYPYEMYQSGA 101 (117)
T ss_dssp HHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999998864
No 7
>2lm1_A Lysine-specific demethylase LID; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Drosophila melanogaster}
Probab=99.93 E-value=2.9e-26 Score=198.56 Aligned_cols=96 Identities=22% Similarity=0.422 Sum_probs=90.6
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCCCCCeeCCeeechhhHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHH
Q 009726 230 SGTEEEQSSFMEELENFFRDRSMEFKPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFR 309 (527)
Q Consensus 230 ~g~~eEr~~Fl~~L~~F~e~RGtp~k~P~IgGK~LDLykLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK 309 (527)
++..+++..|+++|.+||+.+|+++++|+|+|++||||+||++|+++|||++||++++|++||+.||+|.+ +++++.||
T Consensus 10 ~~~~~~~~~F~~~L~~F~~~~g~~l~~P~i~gk~vdL~~Ly~~V~~~GG~~~V~~~~~W~~va~~lg~~~~-~~~~~~lk 88 (107)
T 2lm1_A 10 EAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSS-KSVGATLK 88 (107)
T ss_dssp CCSSHHHHHHHHHHHHHHTTTCCCCSCCCTTTSSCCHHHHHHHHHHHTCHHHHHHHTTHHHHHHHTTCCCC-HHHHHHHH
T ss_pred cCCchHHHHHHHHHHHHHHHcCCCCCCCeECCEeecHHHHHHHHHHhcCHHHhcccCcHHHHHHHhCCCCC-CcHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999864 78999999
Q ss_pred HHHHHhHHHHHhhhhcC
Q 009726 310 GFYEKALLDYERHKTSG 326 (527)
Q Consensus 310 ~~YeKyLlpYE~~~~~~ 326 (527)
++|+|||++||++..+.
T Consensus 89 ~~Y~k~L~~yE~~~~~~ 105 (107)
T 2lm1_A 89 AHYERILHPFEVYTSGK 105 (107)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhHHHHHHHhcC
Confidence 99999999999998764
No 8
>1c20_A DEAD ringer protein; DNA-binding domain, ARID, AT-rich interaction domain, DNA- binding protein; NMR {Drosophila melanogaster} SCOP: a.4.3.1 PDB: 1kqq_A
Probab=99.92 E-value=3.6e-26 Score=204.38 Aligned_cols=97 Identities=25% Similarity=0.446 Sum_probs=92.3
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCC-CCCeeCCeeechhhHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHH
Q 009726 230 SGTEEEQSSFMEELENFFRDRSMEF-KPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTF 308 (527)
Q Consensus 230 ~g~~eEr~~Fl~~L~~F~e~RGtp~-k~P~IgGK~LDLykLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~L 308 (527)
.+..++++.|+++|.+||+.+|+++ ++|+|+|++||||+||++|+++|||++||++++|++||+.||+|.+++++++.|
T Consensus 17 l~~~~~~~~Fl~~L~~F~~~rG~~l~~~P~i~gk~vDL~~Ly~~V~~~GG~~~V~~~k~W~~Va~~lg~~~~~~sa~~~L 96 (128)
T 1c20_A 17 INDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTL 96 (128)
T ss_dssp TCCCHHHHHHHHHHHHHHTTTSSCSSCCCEETTEECCHHHHHHHHHHHTCHHHHHHHTTHHHHHHHTCCCSSCCSHHHHH
T ss_pred cCCchHHHHHHHHHHHHHHHcCCCCccceeECCEeecHHHHHHHHHHhcCHHHcCccCcHHHHHHHhCCCCCCCcHHHHH
Confidence 3445899999999999999999999 799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHhhhhcC
Q 009726 309 RGFYEKALLDYERHKTSG 326 (527)
Q Consensus 309 K~~YeKyLlpYE~~~~~~ 326 (527)
|++|+|||++||++.++.
T Consensus 97 k~~Y~k~L~~yE~~~~~~ 114 (128)
T 1c20_A 97 RTQYMKYLYPYECEKKNL 114 (128)
T ss_dssp HHHHHHHTHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 999999999999999865
No 9
>2rq5_A Protein jumonji; developmental protein, nucleus, repressor, transcription, transcription regulation; NMR {Mus musculus}
Probab=99.92 E-value=1.1e-25 Score=200.89 Aligned_cols=88 Identities=20% Similarity=0.400 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHcCCCCCC-CCeeCCeeechhhHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHh
Q 009726 237 SSFMEELENFFRDRSMEFK-PPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKA 315 (527)
Q Consensus 237 ~~Fl~~L~~F~e~RGtp~k-~P~IgGK~LDLykLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKy 315 (527)
..|+++|.+||+.||+||. +|+|+|++||||+||++|+++|||++||++++|++||..||+|.+|+++++.||++|+||
T Consensus 14 ~~Fl~~L~~F~~~rGtpl~~~P~i~gk~lDL~~Ly~~V~~~GG~~~Vt~~k~W~~Va~~lg~p~~~~sa~~~Lr~~Y~k~ 93 (121)
T 2rq5_A 14 VQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQY 93 (121)
T ss_dssp HHHHHHHHHHHHHTTCCCSSCCEETTEECCHHHHHHHHHHTTSHHHHHHTTCHHHHHHHTCCCTTCSSHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCCCCCCcCCCEeccHHHHHHHHHHcCcHHHhcccCcHHHHHHHhCCCCCcCcHHHHHHHHHHHH
Confidence 5799999999999999995 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhh
Q 009726 316 LLDYERHKT 324 (527)
Q Consensus 316 LlpYE~~~~ 324 (527)
|++||++..
T Consensus 94 L~~YE~~~~ 102 (121)
T 2rq5_A 94 LLSYDSLSP 102 (121)
T ss_dssp HHHHHHCCH
T ss_pred hHHHHCcCH
Confidence 999998654
No 10
>2li6_A SWI/SNF chromatin-remodeling complex subunit SWI1; ligand binding, DNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.91 E-value=8.9e-25 Score=192.60 Aligned_cols=94 Identities=26% Similarity=0.425 Sum_probs=88.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCCCC-CCCeeCCeeechhhHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHH
Q 009726 228 SESGTEEEQSSFMEELENFFRDRSMEF-KPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSW 306 (527)
Q Consensus 228 de~g~~eEr~~Fl~~L~~F~e~RGtp~-k~P~IgGK~LDLykLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~ 306 (527)
+.+...++++.|++.|.+||+.+|+++ ++|+|+|++||||+||++|+++|||++||++++|++||+.||+|. ++
T Consensus 12 ~~e~~~~~~~~F~~~L~~F~~~~G~pl~~~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~-----~~ 86 (116)
T 2li6_A 12 STELNNKQYELFMKSLIENCKKRNMPLQSIPEIGNRKINLFYLYMLVQKFGGADQVTRTQQWSMVAQRLQISD-----YQ 86 (116)
T ss_dssp CSSSSHHHHHHHHHHHHHHHHTTTSCCSSCCCCBSCCCSTTHHHHHHHHHTSHHHHHHTTCHHHHHHHHTSCC-----TT
T ss_pred cccccchhHHHHHHHHHHHHHHcCCCCCCCceECCEeecHHHHHHHHHHhcCHHHccccCcHHHHHHHhCCCh-----HH
Confidence 445678899999999999999999999 799999999999999999999999999999999999999999986 67
Q ss_pred HHHHHHHHhHHHHHhhhhcC
Q 009726 307 TFRGFYEKALLDYERHKTSG 326 (527)
Q Consensus 307 ~LK~~YeKyLlpYE~~~~~~ 326 (527)
.||.+|+|||++||+++...
T Consensus 87 ~Lr~~Y~k~L~~yE~~~~~~ 106 (116)
T 2li6_A 87 QLESIYFRILLPYERHMISQ 106 (116)
T ss_dssp HHHHHHHHHHSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCc
Confidence 89999999999999988654
No 11
>1kkx_A Transcription regulatory protein ADR6; ARID, DNA-binding domain, DNA binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.4.3.1 PDB: 1kn5_A
Probab=99.90 E-value=1.5e-24 Score=193.68 Aligned_cols=92 Identities=25% Similarity=0.445 Sum_probs=85.5
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCC-CCCeeCCeeechhhHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHH
Q 009726 230 SGTEEEQSSFMEELENFFRDRSMEF-KPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTF 308 (527)
Q Consensus 230 ~g~~eEr~~Fl~~L~~F~e~RGtp~-k~P~IgGK~LDLykLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~L 308 (527)
.+..++++.|+++|.+||+.+|+|+ ++|+|+|++||||+||++|+++|||++||++++|++||+.||+|. ++.|
T Consensus 13 ~~~~~~~~~Fl~~L~~F~~~rG~pl~~~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~k~W~~Va~~lg~~~-----~~~L 87 (123)
T 1kkx_A 13 GSNNKQYELFMKSLIENCKKRNMPLQSIPEIGNRKINLFYLYMLVQKFGGADQVTRTQQWSMVAQRLQISD-----YQQL 87 (123)
T ss_dssp --CCCHHHHHHHHHHHHHHHTTCSSSSCCCCSSSSCCTTHHHHHHTTTSCHHHHTTSHHHHHHHHHHTCCC-----HHHH
T ss_pred CCcchhHHHHHHHHHHHHHHcCCCCCcCceECCEeecHHHHHHHHHHhcCHHhccccccHHHHHHHHCCCh-----HHHH
Confidence 3567788999999999999999999 799999999999999999999999999999999999999999986 7899
Q ss_pred HHHHHHhHHHHHhhhhcC
Q 009726 309 RGFYEKALLDYERHKTSG 326 (527)
Q Consensus 309 K~~YeKyLlpYE~~~~~~ 326 (527)
|++|+|||++||+++...
T Consensus 88 r~~Y~k~L~~yE~~~~~~ 105 (123)
T 1kkx_A 88 ESIYFRILLPYERHMISQ 105 (123)
T ss_dssp HHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHhCc
Confidence 999999999999988654
No 12
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.83 E-value=3.7e-20 Score=158.24 Aligned_cols=85 Identities=20% Similarity=0.311 Sum_probs=76.6
Q ss_pred eeeEEEeCCEEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCCC----CCceeeEEEEEeCCCCcccCCceEEeccCc
Q 009726 440 KINVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDN----PWGVTPFKKVVSLPARIDPHLTSAVVTLHG 515 (527)
Q Consensus 440 ~vDV~Et~D~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e~----~~~~~~F~R~~~LP~~VD~d~IsAsy~~nG 515 (527)
++||+|++++|+|.++||||+++||+|+++ ++.|+|+|+++.... +..+..|+|+|.||..||.+.|+|+|+ ||
T Consensus 8 ~~di~e~~~~~~v~~~lPG~~~edi~v~~~-~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~-~G 85 (102)
T 4fei_A 8 AADWRDAGTHLDLLLDVPGVDAGTLALAED-GGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLA-GG 85 (102)
T ss_dssp CEEEEEETTEEEEEEECTTCCGGGCEEEEE-TTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEE-TT
T ss_pred cEEEEEcCCEEEEEEECCCCchHhEEEEEE-CCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEE-CC
Confidence 599999999999999999999999999999 999999999965421 223449999999999999999999999 99
Q ss_pred EEEEEeeccCC
Q 009726 516 QLFVRVPFEQT 526 (527)
Q Consensus 516 VL~ItLPK~~~ 526 (527)
||+|+|||..+
T Consensus 86 vL~I~lpK~~~ 96 (102)
T 4fei_A 86 VLTVRFEKLRP 96 (102)
T ss_dssp EEEEEEEBSSC
T ss_pred EEEEEEEccCc
Confidence 99999999865
No 13
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.83 E-value=2.8e-20 Score=157.24 Aligned_cols=85 Identities=26% Similarity=0.450 Sum_probs=75.4
Q ss_pred eeeEEEeCCEEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCCC--C-------CceeeEEEEEeCCCCcccCCceEE
Q 009726 440 KINVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDN--P-------WGVTPFKKVVSLPARIDPHLTSAV 510 (527)
Q Consensus 440 ~vDV~Et~D~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e~--~-------~~~~~F~R~~~LP~~VD~d~IsAs 510 (527)
++||+|++++|+|.++||||+++||+|+++ ++.|+|+|++..... . ..+..|+|+|.||..||.+.|+|+
T Consensus 6 ~~di~e~~~~~~v~~~lPG~~~edi~v~~~-~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~ 84 (100)
T 3gla_A 6 RVDIKEEVNHFVLYADLPGIDPSQIEVQMD-KGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAA 84 (100)
T ss_dssp CEEEEECSSEEEEEEECTTSCGGGCEEEEE-TTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEE
T ss_pred cEEEEECCCEEEEEEECCCCCHHHEEEEEE-CCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEEE
Confidence 499999999999999999999999999999 999999999976521 1 223489999999999999999999
Q ss_pred eccCcEEEEEeeccCC
Q 009726 511 VTLHGQLFVRVPFEQT 526 (527)
Q Consensus 511 y~~nGVL~ItLPK~~~ 526 (527)
|+ ||||+|+|||...
T Consensus 85 ~~-~GvL~I~~pK~~~ 99 (100)
T 3gla_A 85 GR-NGVLEIRIPKRPA 99 (100)
T ss_dssp EE-TTEEEEEEEBC--
T ss_pred Ee-CCEEEEEEecCCC
Confidence 99 9999999999753
No 14
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.81 E-value=8.4e-20 Score=157.78 Aligned_cols=84 Identities=20% Similarity=0.302 Sum_probs=76.3
Q ss_pred eeEEEeCCEEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCC--CCCCceeeEEEEEeCCCCcccCCceEEe-ccCcEE
Q 009726 441 INVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHP--DNPWGVTPFKKVVSLPARIDPHLTSAVV-TLHGQL 517 (527)
Q Consensus 441 vDV~Et~D~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~--e~~~~~~~F~R~~~LP~~VD~d~IsAsy-~~nGVL 517 (527)
+||+|++++|+|.++||||+++||+|+++ ++.|+|+|++... +..+.+..|.|+|.||.+||.++|+|+| + ||||
T Consensus 5 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~-~GvL 82 (106)
T 3l1e_A 5 SEVRSDRDKFVIFLDVKHFSPEDLTVKVQ-EDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSA-DGML 82 (106)
T ss_dssp EEEEECSSEEEEEEECTTSCGGGEEEEEE-TTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECT-TSEE
T ss_pred eEEEEcCCEEEEEEECCCCChHHEEEEEE-CCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECC-CCEE
Confidence 89999999999999999999999999999 9999999998654 2334455899999999999999999999 8 9999
Q ss_pred EEEeeccCC
Q 009726 518 FVRVPFEQT 526 (527)
Q Consensus 518 ~ItLPK~~~ 526 (527)
+|++||..+
T Consensus 83 ~I~~PK~~~ 91 (106)
T 3l1e_A 83 TFSGPKIPS 91 (106)
T ss_dssp EEEEEBCCC
T ss_pred EEEEEccCc
Confidence 999999764
No 15
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.81 E-value=8.5e-20 Score=151.90 Aligned_cols=82 Identities=23% Similarity=0.358 Sum_probs=70.9
Q ss_pred EEEeCCEEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCC--CCCceeeEEEEEeCCCCcccCCceEEeccCcEEEEE
Q 009726 443 VQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPD--NPWGVTPFKKVVSLPARIDPHLTSAVVTLHGQLFVR 520 (527)
Q Consensus 443 V~Et~D~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e--~~~~~~~F~R~~~LP~~VD~d~IsAsy~~nGVL~It 520 (527)
+.|++++|+|.++||||+++||+|+++ ++.|+|+|+++... .++.+.+|.|+|.||..||+++|+|+|..||||+|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~ 80 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTK-DGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVE 80 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEE-TTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEE-CCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEE
Confidence 468999999999999999999999999 99999999987653 234456999999999999999999999559999999
Q ss_pred eeccC
Q 009726 521 VPFEQ 525 (527)
Q Consensus 521 LPK~~ 525 (527)
+||..
T Consensus 81 lPK~k 85 (85)
T 3q9p_A 81 APMPK 85 (85)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99963
No 16
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.81 E-value=6.2e-20 Score=157.16 Aligned_cols=84 Identities=18% Similarity=0.269 Sum_probs=76.6
Q ss_pred eeEEEeCCEEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCC--CCCceeeEEEEEeCCCCcccCCceEEe-ccCcEE
Q 009726 441 INVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPD--NPWGVTPFKKVVSLPARIDPHLTSAVV-TLHGQL 517 (527)
Q Consensus 441 vDV~Et~D~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e--~~~~~~~F~R~~~LP~~VD~d~IsAsy-~~nGVL 517 (527)
+||+|++++|+|.++||||+++||+|+++ ++.|+|+|++.... ..+.+..|+|+|.||.+||.++|+|+| . ||||
T Consensus 4 vdi~e~~~~~~v~~dlPG~~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~-nGvL 81 (101)
T 2wj5_A 4 AQVPTDPGYFSVLLDVKHFSPEEISVKVV-GDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSP-EGVL 81 (101)
T ss_dssp CCCCCCSSCEEEEEECTTSCGGGEEEEEE-TTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECT-TSEE
T ss_pred EEEEEeCCEEEEEEECCCCcHHHeEEEEE-CCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECC-CCEE
Confidence 89999999999999999999999999999 99999999997653 344455899999999999999999999 8 9999
Q ss_pred EEEeeccCC
Q 009726 518 FVRVPFEQT 526 (527)
Q Consensus 518 ~ItLPK~~~ 526 (527)
+|++||...
T Consensus 82 ~I~lPK~~~ 90 (101)
T 2wj5_A 82 SIQATPASA 90 (101)
T ss_dssp EEEECBCCC
T ss_pred EEEEECCCc
Confidence 999999753
No 17
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.79 E-value=4.4e-19 Score=162.75 Aligned_cols=87 Identities=20% Similarity=0.300 Sum_probs=77.9
Q ss_pred CCeeeeEEEeCCEEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCC--CC-------C-ceeeEEEEEeCCCCcccCC
Q 009726 437 DWVKINVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPD--NP-------W-GVTPFKKVVSLPARIDPHL 506 (527)
Q Consensus 437 ~wv~vDV~Et~D~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e--~~-------~-~~~~F~R~~~LP~~VD~d~ 506 (527)
.|+++||+|++++|+|.++||||++|||+|+++ ++.|+|+|+++... .. . .+..|+|+|.||..||.++
T Consensus 55 ~~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~-~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~ 133 (161)
T 4eld_A 55 GFMPISIIEGDQHIKVIAWLPGVNKEDIILNAV-GDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEEN 133 (161)
T ss_dssp SCCCEEEEECSSEEEEEEECTTCCGGGEEEEEE-TTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGG
T ss_pred cccceeEEEeCCEEEEEEECCCCChHhEEEEEE-CCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCccccc
Confidence 366799999999999999999999999999999 99999999998741 11 2 3458999999999999999
Q ss_pred ceEEeccCcEEEEEeeccC
Q 009726 507 TSAVVTLHGQLFVRVPFEQ 525 (527)
Q Consensus 507 IsAsy~~nGVL~ItLPK~~ 525 (527)
|+|+|+ ||||+|+|||..
T Consensus 134 i~A~~~-nGvL~I~lpK~~ 151 (161)
T 4eld_A 134 ASAKFE-NGVLSVILPKAE 151 (161)
T ss_dssp CEEEEE-TTEEEEEEEBCG
T ss_pred EEEEEE-CCEEEEEEEcCC
Confidence 999999 999999999964
No 18
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.78 E-value=8.4e-19 Score=154.19 Aligned_cols=85 Identities=20% Similarity=0.337 Sum_probs=76.3
Q ss_pred CeeeeEEEeCCEEEEEEEcCCCCCCCeEEEEecC-CeEEEEEEecCCCC-CC-----ceeeEEEEEeCCCCcccCCc-eE
Q 009726 438 WVKINVQRTKDCFEVYALVPGLLREEVRVQSDPA-GRLVISGEPEHPDN-PW-----GVTPFKKVVSLPARIDPHLT-SA 509 (527)
Q Consensus 438 wv~vDV~Et~D~yvV~adLPGv~kEDI~VqVd~~-~~LtIsGeR~~~e~-~~-----~~~~F~R~~~LP~~VD~d~I-sA 509 (527)
|+++||+|++++|+|.++||||+++||+|+++ + +.|+|+|++..... .+ .+ .|+|+|.||..||.++| +|
T Consensus 24 ~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~-~~~~L~I~g~~~~~~~~~~~~~Er~~-~f~R~~~LP~~vd~~~i~~A 101 (123)
T 3aab_A 24 YPPVDMYEEGGYLVVVADLAGFNKEKIKARVS-GQNELIIEAEREITEPGVKYLTQRPK-YVRKVIRLPYNVAKDAEISG 101 (123)
T ss_dssp CSCEEEEEETTEEEEEEECCSCCGGGCEEEEE-TTTEEEEEEECCCCCCSCEEEECSCS-EEEEEEECSSEECTTCCCEE
T ss_pred CCcEEEEEcCCEEEEEEECCCCCHHHEEEEEe-CCCEEEEEEEEeccCCCeEEEEEEeE-EEEEEEECCCCcCcchhCee
Confidence 34599999999999999999999999999999 7 99999999876541 11 22 89999999999999999 99
Q ss_pred EeccCcEEEEEeeccC
Q 009726 510 VVTLHGQLFVRVPFEQ 525 (527)
Q Consensus 510 sy~~nGVL~ItLPK~~ 525 (527)
+|+ ||||+|+|||..
T Consensus 102 ~~~-~GvL~I~lPK~~ 116 (123)
T 3aab_A 102 KYE-NGVLTIRIPIAG 116 (123)
T ss_dssp EEE-TTEEEEEEEGGG
T ss_pred EEc-CCEEEEEEEcCC
Confidence 999 999999999975
No 19
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.76 E-value=1.9e-18 Score=144.84 Aligned_cols=81 Identities=25% Similarity=0.338 Sum_probs=68.5
Q ss_pred EEeCCEEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCC--CCCceeeEEEEEeCCCCcccCCceEEe-ccCcEEEEE
Q 009726 444 QRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPD--NPWGVTPFKKVVSLPARIDPHLTSAVV-TLHGQLFVR 520 (527)
Q Consensus 444 ~Et~D~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e--~~~~~~~F~R~~~LP~~VD~d~IsAsy-~~nGVL~It 520 (527)
.+++++|+|.++||||+++||+|+++ ++.|+|+|++.... ..+.+..|+|+|.||..||.+.|+|+| . ||||+|+
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~-~GvL~I~ 79 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVL-GDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSS-DGVLTVN 79 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEE-TTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECT-TSEEEEE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEE-CCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECC-CCEEEEE
Confidence 36889999999999999999999999 99999999987542 234445899999999999999999999 8 9999999
Q ss_pred eeccCC
Q 009726 521 VPFEQT 526 (527)
Q Consensus 521 LPK~~~ 526 (527)
+||...
T Consensus 80 ~pK~~~ 85 (90)
T 2y1y_A 80 GPRKQV 85 (90)
T ss_dssp ECBC--
T ss_pred EEcCCC
Confidence 999753
No 20
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.75 E-value=4.4e-18 Score=155.34 Aligned_cols=87 Identities=24% Similarity=0.317 Sum_probs=76.5
Q ss_pred eeeeEEEeCCEEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCCC--CC-------ceeeEEEEEeCCCCcccCCceE
Q 009726 439 VKINVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDN--PW-------GVTPFKKVVSLPARIDPHLTSA 509 (527)
Q Consensus 439 v~vDV~Et~D~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e~--~~-------~~~~F~R~~~LP~~VD~d~IsA 509 (527)
+++||+|++++|+|.++||||+++||+|+++.++.|+|+|++..... .. .+..|+|+|.||..||.+.|+|
T Consensus 44 p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A 123 (151)
T 1gme_A 44 ARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKA 123 (151)
T ss_dssp GCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEE
Confidence 46999999999999999999999999999953789999999876532 11 2348999999999999999999
Q ss_pred EeccCcEEEEEeeccCC
Q 009726 510 VVTLHGQLFVRVPFEQT 526 (527)
Q Consensus 510 sy~~nGVL~ItLPK~~~ 526 (527)
+|+ ||||+|+|||...
T Consensus 124 ~~~-nGvL~I~lPK~~~ 139 (151)
T 1gme_A 124 GLE-NGVLTVTVPKAEV 139 (151)
T ss_dssp EEE-TTEEEEEEECCCC
T ss_pred EEE-CCEEEEEEEccCc
Confidence 999 9999999999753
No 21
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.73 E-value=4.7e-18 Score=159.49 Aligned_cols=83 Identities=24% Similarity=0.339 Sum_probs=72.3
Q ss_pred eeEEEeCCEEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCC--CCCceeeEEEEEeCCCCcccCCceEEe-ccCcEE
Q 009726 441 INVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPD--NPWGVTPFKKVVSLPARIDPHLTSAVV-TLHGQL 517 (527)
Q Consensus 441 vDV~Et~D~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e--~~~~~~~F~R~~~LP~~VD~d~IsAsy-~~nGVL 517 (527)
+||+|++++|+|.++||||++|||+|+++ +|.|+|+|+++... .++....|+|+|.||.+||.++|+|+| + ||||
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~-dGvL 143 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVL-GDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSS-DGVL 143 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEE-TTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECT-TSCE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEE-CCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcC-CCEE
Confidence 79999999999999999999999999999 99999999987543 233445899999999999999999999 8 9999
Q ss_pred EEEeeccC
Q 009726 518 FVRVPFEQ 525 (527)
Q Consensus 518 ~ItLPK~~ 525 (527)
+|++||..
T Consensus 144 ~I~lPK~~ 151 (175)
T 2klr_A 144 TVNGPRKQ 151 (175)
T ss_dssp EEEEECC-
T ss_pred EEEEECCC
Confidence 99999965
No 22
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.68 E-value=8.5e-17 Score=163.25 Aligned_cols=88 Identities=18% Similarity=0.293 Sum_probs=79.7
Q ss_pred CeeeeEEEeCC----EEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCC-CCCceeeEEEEEeCCCCcccCCceEEec
Q 009726 438 WVKINVQRTKD----CFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPD-NPWGVTPFKKVVSLPARIDPHLTSAVVT 512 (527)
Q Consensus 438 wv~vDV~Et~D----~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e-~~~~~~~F~R~~~LP~~VD~d~IsAsy~ 512 (527)
++++||+|+++ +|+|.++||||++|||+|+++ +|.|+|+|+++... .+..+..|.|+|.||..||.++|+|+|+
T Consensus 98 ~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~-~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~ 176 (314)
T 2bol_A 98 DFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKAD-KNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATIT 176 (314)
T ss_dssp GGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEE-TTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEEC
T ss_pred CCccceEEcCCCCceEEEEEEECCCCchHHeEEEEE-CCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEe
Confidence 45799999999 999999999999999999999 99999999998653 3344569999999999999999999998
Q ss_pred cCcEEEEEeeccCC
Q 009726 513 LHGQLFVRVPFEQT 526 (527)
Q Consensus 513 ~nGVL~ItLPK~~~ 526 (527)
.||||+|+|||..+
T Consensus 177 ~nGVL~I~lPK~~~ 190 (314)
T 2bol_A 177 TDDVLVIEAPVNEP 190 (314)
T ss_dssp SSSEEEEEEEBSSC
T ss_pred CCCEEEEEEeccCc
Confidence 89999999999764
No 23
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.58 E-value=3.3e-15 Score=151.61 Aligned_cols=83 Identities=17% Similarity=0.287 Sum_probs=70.6
Q ss_pred eeeEEEeC---CEEEEEEEc-CCCCCCCeEEEEecCCeEEEEEEecCCCC-----CCceeeEEEEEeCCCCcccCCceEE
Q 009726 440 KINVQRTK---DCFEVYALV-PGLLREEVRVQSDPAGRLVISGEPEHPDN-----PWGVTPFKKVVSLPARIDPHLTSAV 510 (527)
Q Consensus 440 ~vDV~Et~---D~yvV~adL-PGv~kEDI~VqVd~~~~LtIsGeR~~~e~-----~~~~~~F~R~~~LP~~VD~d~IsAs 510 (527)
.++|.+++ +.|+|.++| |||+||||+|+|+ +|.|+|+|+|+.... +..+..|.|+|.||.+||+++|+|+
T Consensus 222 ~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~-~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~ 300 (314)
T 2bol_A 222 GLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAK-GNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAE 300 (314)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCGGGEEEEES-SSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEE
T ss_pred CCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEE-CCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEE
Confidence 37888876 589999999 9999999999999 999999999987643 3345599999999999999999999
Q ss_pred eccCcEEEEEeecc
Q 009726 511 VTLHGQLFVRVPFE 524 (527)
Q Consensus 511 y~~nGVL~ItLPK~ 524 (527)
|+ ||||+|+|||.
T Consensus 301 ~~-dGvL~i~~Pk~ 313 (314)
T 2bol_A 301 IV-DGLMVVEAPLF 313 (314)
T ss_dssp EE-TTEEEEEEEEE
T ss_pred Ee-CCEEEEEEecC
Confidence 99 99999999985
No 24
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.68 E-value=6.9e-08 Score=79.48 Aligned_cols=80 Identities=13% Similarity=0.102 Sum_probs=72.0
Q ss_pred eeeeEEEeCCEEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCCCCCceeeEEEEEeCCCCcccCCceEEeccCcEEE
Q 009726 439 VKINVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARIDPHLTSAVVTLHGQLF 518 (527)
Q Consensus 439 v~vDV~Et~D~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e~~~~~~~F~R~~~LP~~VD~d~IsAsy~~nGVL~ 518 (527)
++++.+++.+.+.|++.+||+.++++.|.+. .+.|.|++... +...|...+.|+..||++..++.+. +|.|+
T Consensus 3 ~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~-~~~l~v~~~~~------~~~~y~~~~~L~~~I~~~~s~~~~~-~~~l~ 74 (92)
T 2xcm_C 3 YRHEYYQKPEEVVVTVFAKGIPKQNVNIDFG-EQILSVVIEVP------GEDAYYLQPRLFGKIIPDKCKYEVL-STKIE 74 (92)
T ss_dssp SEEEEEEETTEEEEEEECCSCCGGGEEEEEC-SSBEEEEECCT------TSCCEEECCBBSSCBCGGGCEEEEC-SSCEE
T ss_pred ccccEEeCCCEEEEEEEECCCChHHeEEEEE-CCEEEEEEEcC------CCcEEEEeeEcCCccCchhEEEEEE-CCEEE
Confidence 4689999999999999999999999999999 89999998642 1237899999999999999999999 99999
Q ss_pred EEeeccCC
Q 009726 519 VRVPFEQT 526 (527)
Q Consensus 519 ItLPK~~~ 526 (527)
|+|.|+++
T Consensus 75 i~L~K~~~ 82 (92)
T 2xcm_C 75 ICLAKADI 82 (92)
T ss_dssp EEEEBSSS
T ss_pred EEEEcCCC
Confidence 99999764
No 25
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.68 E-value=6.2e-08 Score=83.35 Aligned_cols=80 Identities=11% Similarity=0.131 Sum_probs=72.3
Q ss_pred eeeeEEEeCCEEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCCCCCceeeEEEEEeCCCCcccCCceEEeccCcEEE
Q 009726 439 VKINVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARIDPHLTSAVVTLHGQLF 518 (527)
Q Consensus 439 v~vDV~Et~D~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e~~~~~~~F~R~~~LP~~VD~d~IsAsy~~nGVL~ 518 (527)
++++++++.+.+.|++.+||+.+++|.|.+. ++.|.|++... +...|...+.|+..||++..++.+. +|.|+
T Consensus 10 ~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~-~~~l~v~~~~~------~~~~y~~~~~L~~~I~~e~s~~~~~-~~~l~ 81 (114)
T 1rl1_A 10 IKYDWYQTESQVVITLMIKNVQKNDVNVEFS-EKELSALVKLP------SGEDYNLKLELLHPIIPEQSTFKVL-STKIE 81 (114)
T ss_dssp CCEEEEECSSEEEEEECCCSCCGGGEEEECS-SSCEEEEEECT------TSSEEEEEECBSSCCCGGGEEEEEC-SSSEE
T ss_pred CCccEEeCCCEEEEEEEeCCCCHHHCEEEEE-cCEEEEEEEeC------CCcEEEEEeeCCCcCCccccEEEEE-CCEEE
Confidence 3589999999999999999999999999999 88999998752 1237999999999999999999999 99999
Q ss_pred EEeeccCC
Q 009726 519 VRVPFEQT 526 (527)
Q Consensus 519 ItLPK~~~ 526 (527)
|+|+|.+.
T Consensus 82 i~L~K~~~ 89 (114)
T 1rl1_A 82 IKLKKPEA 89 (114)
T ss_dssp EEEECSSC
T ss_pred EEEEcCCC
Confidence 99999764
No 26
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.28 E-value=0.0007 Score=61.60 Aligned_cols=75 Identities=8% Similarity=0.211 Sum_probs=65.7
Q ss_pred eeeEEEeCCEEEEEEEcCCCC--CCCeEEEEecCCeEEEEEEecCCCCCCceeeEEEEEeCCCCc-ccCCceEEecc-Cc
Q 009726 440 KINVQRTKDCFEVYALVPGLL--REEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARI-DPHLTSAVVTL-HG 515 (527)
Q Consensus 440 ~vDV~Et~D~yvV~adLPGv~--kEDI~VqVd~~~~LtIsGeR~~~e~~~~~~~F~R~~~LP~~V-D~d~IsAsy~~-nG 515 (527)
...|..+++.++|.+-+|.+. ..+++|.|+ +..+... ..+|.-++.||-.| |.+.-+|+|.. .|
T Consensus 5 ~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~-~~~F~F~-----------~~PYyLRL~LP~~V~e~~~~kA~YD~d~~ 72 (134)
T 2k8q_A 5 RFSITQDEEFIFLKIFISNIRFSAVGLEIIIQ-ENMIIFH-----------LSPYYLRLRFPHELIDDERSTAQYDSKDE 72 (134)
T ss_dssp EEEEEECSSEEEEEEECCSSCCCSSSCCCEEC-SSSEEEC-----------SSSSCEEECCSSCEECCSSCEEEEETTTT
T ss_pred eEEEEECCCEEEEEEEcCccccCccccEEEEe-CCEEEEe-----------cCCeEEEecCCCeeecCCCcceeEeccCC
Confidence 467889999999999999999 999999999 7777663 33788889999999 99999999963 89
Q ss_pred EEEEEeeccCC
Q 009726 516 QLFVRVPFEQT 526 (527)
Q Consensus 516 VL~ItLPK~~~ 526 (527)
.|+|+|||..+
T Consensus 73 ~~~VtLpK~~~ 83 (134)
T 2k8q_A 73 CINVKVAKLNK 83 (134)
T ss_dssp EEEEEEEESST
T ss_pred EEEEEEeCCCC
Confidence 99999999865
No 27
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.0084 Score=53.35 Aligned_cols=76 Identities=8% Similarity=0.168 Sum_probs=65.1
Q ss_pred eeeeEEEeCCEEEEEEEcCCCC--CCCeEEEEecCCeEEEEEEecCCCCCCceeeEEEEEeCCCCc-ccCCceEEec-cC
Q 009726 439 VKINVQRTKDCFEVYALVPGLL--REEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARI-DPHLTSAVVT-LH 514 (527)
Q Consensus 439 v~vDV~Et~D~yvV~adLPGv~--kEDI~VqVd~~~~LtIsGeR~~~e~~~~~~~F~R~~~LP~~V-D~d~IsAsy~-~n 514 (527)
+...|..+++.++|.+-+|-+. ..++++.|+ +..++.... +|.-++.||..| |.+.-+|+|+ .+
T Consensus 18 P~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd-~~~F~F~~~-----------PYyLRL~lP~~vved~~~~A~YD~d~ 85 (115)
T 3eud_A 18 PRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQ-ENMIIFHLS-----------PYYLRLRFPHELIDDERSTAQYDSKD 85 (115)
T ss_dssp CCEEEEECSSEEEEEEECCSCCCCSSSCEEEEE-TTEEEEEET-----------TEEEEEECSSCEECSTTCEEEEETTT
T ss_pred CcEEEEECCCEEEEEEEcCceecccCccEEEEe-CCEEEEecC-----------CeEEEEecCcceecCCCcceEEeCCC
Confidence 3578889999999999999877 789999999 777776533 788899999998 7788999995 38
Q ss_pred cEEEEEeeccCC
Q 009726 515 GQLFVRVPFEQT 526 (527)
Q Consensus 515 GVL~ItLPK~~~ 526 (527)
|.++|+|||..+
T Consensus 86 g~~~v~lpK~~~ 97 (115)
T 3eud_A 86 ECINVKVAKLNK 97 (115)
T ss_dssp TEEEEEEEESST
T ss_pred cEEEEEEcCCcC
Confidence 999999999865
No 28
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.76 E-value=0.014 Score=51.24 Aligned_cols=79 Identities=13% Similarity=0.157 Sum_probs=68.5
Q ss_pred eeeEEEeCCEEEEEEEcCCC---CCCCeEEEEecCCeEEEEEEecCCCCCCceeeEEEEEe-CCCCcccCCceEEeccCc
Q 009726 440 KINVQRTKDCFEVYALVPGL---LREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVS-LPARIDPHLTSAVVTLHG 515 (527)
Q Consensus 440 ~vDV~Et~D~yvV~adLPGv---~kEDI~VqVd~~~~LtIsGeR~~~e~~~~~~~F~R~~~-LP~~VD~d~IsAsy~~nG 515 (527)
+++.+.+.+.+.|++.++|+ .++++.|.+. .+.|.|...-. ....|.-.+. |-..||++.-+..+. .+
T Consensus 22 ~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~-~~~l~v~~~~~------~~~~y~~~~~~L~~~I~~e~S~~~v~-~~ 93 (127)
T 1x5m_A 22 NYGWDQSDKFVKIYITLTGVHQVPTENVQVHFT-ERSFDLLVKNL------NGKSYSMIVNNLLKPISVEGSSKKVK-TD 93 (127)
T ss_dssp SCEEEEETTEEEEEEECTTTTTSCTTSEEEEEC-SSEEEEEECSC------SSSCEEEEEECBSSCCCTTTCEEEEE-TT
T ss_pred EEEEEcCCCEEEEEEEeCCCCcCCccccEEEEE-cCEEEEEEEcC------CCCcEEEEhHHhcCccCcccCEEEEe-CC
Confidence 68999999999999999999 8999999999 88999987421 1136778885 999999999999999 99
Q ss_pred EEEEEeeccCC
Q 009726 516 QLFVRVPFEQT 526 (527)
Q Consensus 516 VL~ItLPK~~~ 526 (527)
.++|+|-|+..
T Consensus 94 kVei~L~K~~~ 104 (127)
T 1x5m_A 94 TVLILCRKKVE 104 (127)
T ss_dssp EEEEEEECSSS
T ss_pred EEEEEEEECCC
Confidence 99999999753
No 29
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=96.67 E-value=0.0082 Score=54.04 Aligned_cols=86 Identities=20% Similarity=0.194 Sum_probs=70.1
Q ss_pred eeeeEEEe-CCEEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCC-----CCCc-eeeEEEEEeCCCCcccCCceEEe
Q 009726 439 VKINVQRT-KDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPD-----NPWG-VTPFKKVVSLPARIDPHLTSAVV 511 (527)
Q Consensus 439 v~vDV~Et-~D~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e-----~~~~-~~~F~R~~~LP~~VD~d~IsAsy 511 (527)
++++.+.+ .+.+.|++.++|+.++++.|.+. .+.|.|+..-.... ...+ ...|.-.+.|-..||++.-+..+
T Consensus 20 ~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~-~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~v 98 (134)
T 1wh0_A 20 VKNDSYEKGPDSVVVHVYVKEICRDTSRVLFR-EQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFCF 98 (134)
T ss_dssp CCEEEEEETTTEEEEEEECCSBCTTSCEEEEC-SSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEEE
T ss_pred CCeEEEcCCCCEEEEEEEeCCCCcccCEEEEE-CCEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEEE
Confidence 36999999 99999999999999999999999 88999987532100 0000 12688888999999999999999
Q ss_pred ccCcEEEEEeeccCC
Q 009726 512 TLHGQLFVRVPFEQT 526 (527)
Q Consensus 512 ~~nGVL~ItLPK~~~ 526 (527)
. .+-++|+|-|++.
T Consensus 99 ~-~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 99 T-ASRIDICLRKRQS 112 (134)
T ss_dssp C-SSEEEEEEEESSS
T ss_pred e-CCEEEEEEEECCC
Confidence 9 8999999999753
No 30
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=96.22 E-value=0.0074 Score=62.33 Aligned_cols=62 Identities=15% Similarity=0.262 Sum_probs=55.0
Q ss_pred EEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCCCCCceeeEEEEEeCCCCcc-cCCceEEeccCcEEEEEeec
Q 009726 449 CFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARID-PHLTSAVVTLHGQLFVRVPF 523 (527)
Q Consensus 449 ~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e~~~~~~~F~R~~~LP~~VD-~d~IsAsy~~nGVL~ItLPK 523 (527)
.|.+.+.|||+++++|+|.-. ++.|+|+ ...|+|.|.||..+- ..-..|+|+ ||.|+|++=.
T Consensus 306 ~~~~~l~lP~~~~~~~~l~~~-gdeL~v~-----------~g~~rR~i~LP~~L~~~~v~~A~~~-~~~L~i~~~~ 368 (374)
T 3igf_A 306 NRQVRLFLPGFDKKQVKLTQY-GPEVTVE-----------AGDQRRNIFLPPALSGRPITGAKFQ-NNYLIISFLE 368 (374)
T ss_dssp TTEEEEECTTCCGGGCEEEEE-TTEEEEE-----------ETTEEEEEECCTTTTTCCEEEEEEE-TTEEEEEECC
T ss_pred cEEEEEECCCCCHHHeEEEEE-CCeEEEE-----------ECCEeecccCCHHHcCCCccccEEE-CCEEEEEEeh
Confidence 799999999999999999999 9999997 448999999999864 446789999 9999998744
No 31
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=96.05 E-value=0.066 Score=46.82 Aligned_cols=80 Identities=15% Similarity=0.103 Sum_probs=66.0
Q ss_pred CeeeeEEEeCCEEEEEEEcC-CC-CCCCeEEEEecCCeEEEEEEecCCCCCCceeeEEEEEeCCCCcccCCceEEeccCc
Q 009726 438 WVKINVQRTKDCFEVYALVP-GL-LREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARIDPHLTSAVVTLHG 515 (527)
Q Consensus 438 wv~vDV~Et~D~yvV~adLP-Gv-~kEDI~VqVd~~~~LtIsGeR~~~e~~~~~~~F~R~~~LP~~VD~d~IsAsy~~nG 515 (527)
...+..+.+.+.+.|++.|| |+ +++||.|.+. .+.|.|..... .+. .+.-...|...|+++.-...++ +|
T Consensus 19 ~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~-~~~l~v~~~~~-----~~~-~~~~~~~L~~~I~~e~S~w~i~-~~ 90 (124)
T 1wgv_A 19 RENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALS-SSSIRVAMLEE-----NGE-RVLMEGKLTHKINTESSLWSLE-PG 90 (124)
T ss_dssp CSSCEEEEETTEEEEEEECCTTCCSGGGEEEEEC-SSEEEEEEECS-----SSE-EEEEEEEBSSCBCTTTCEEEEC-TT
T ss_pred CCcEEEEEcccEEEEEEEcCCCCCchhheEEEEE-cCEEEEEEEcc-----CCC-ceEEcccccCcCCCcCCEEEEe-CC
Confidence 34688999999999999999 88 8999999999 89999986531 011 2335678999999999999999 87
Q ss_pred E-EEEEeeccC
Q 009726 516 Q-LFVRVPFEQ 525 (527)
Q Consensus 516 V-L~ItLPK~~ 525 (527)
- |.|+|-|.+
T Consensus 91 k~v~i~L~K~~ 101 (124)
T 1wgv_A 91 KCVLVNLSKVG 101 (124)
T ss_dssp SEEEEEECBSS
T ss_pred CEEEEEEEECC
Confidence 5 999999875
No 32
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=95.69 E-value=0.056 Score=47.31 Aligned_cols=79 Identities=14% Similarity=0.057 Sum_probs=64.5
Q ss_pred CCCeeeeEEEeCCEEEEEEEcCC---CCCCCeEEEEecCCeEEEEEEecCCCCCCceeeEEEEEeCCCCcccCCceEEec
Q 009726 436 ADWVKINVQRTKDCFEVYALVPG---LLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARIDPHLTSAVVT 512 (527)
Q Consensus 436 a~wv~vDV~Et~D~yvV~adLPG---v~kEDI~VqVd~~~~LtIsGeR~~~e~~~~~~~F~R~~~LP~~VD~d~IsAsy~ 512 (527)
+....+..+.|.+.+.|++.||. ++.+||.|.+. .+.|.|...-. .+.-...|...|+++.-...++
T Consensus 14 ~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~-~~~l~v~~kg~---------~~~~~g~L~~~I~~deS~w~i~ 83 (121)
T 3qor_A 14 ADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQ-RRHLRVGLKGQ---------PAIIDGELYNEVKVEESSWLIA 83 (121)
T ss_dssp CBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEE-TTEEEEEETTS---------CCSEEEEBSSCBCGGGCEEEEE
T ss_pred CcCCCEEEEEccceEEEEEECCCCCcccccceEEEEE-cCEEEEEEcCc---------ceEEeccccccccccccEEEEc
Confidence 34456888999999999999994 78999999999 88998864311 1223567999999999999999
Q ss_pred cCc-EEEEEeeccC
Q 009726 513 LHG-QLFVRVPFEQ 525 (527)
Q Consensus 513 ~nG-VL~ItLPK~~ 525 (527)
+| .|.|+|-|..
T Consensus 84 -~~~~i~i~L~K~~ 96 (121)
T 3qor_A 84 -DGAVVTVHLEKIN 96 (121)
T ss_dssp -TTTEEEEEEEBSS
T ss_pred -CCCEEEEEEEECC
Confidence 88 9999999874
No 33
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=95.63 E-value=0.06 Score=47.58 Aligned_cols=73 Identities=11% Similarity=0.043 Sum_probs=61.0
Q ss_pred eeeEEEeCCEEEEEEEcC-CCCCCCeEEEEecCCeEEEEEEecCCCCCCceeeEEEEEeCCCCcccCCceEEeccCcEEE
Q 009726 440 KINVQRTKDCFEVYALVP-GLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARIDPHLTSAVVTLHGQLF 518 (527)
Q Consensus 440 ~vDV~Et~D~yvV~adLP-Gv~kEDI~VqVd~~~~LtIsGeR~~~e~~~~~~~F~R~~~LP~~VD~d~IsAsy~~nGVL~ 518 (527)
.+..+.+.+.+.|++.|| |+.++||.|.+. .+.|.|... +. . .-...|...|+++.-...+. +|-|.
T Consensus 6 ~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~-~~~l~v~~~--------g~-~-~~~~~L~~~I~~e~S~w~i~-~~kv~ 73 (131)
T 2o30_A 6 KYTWDQELNEINIQFPVTGDADSSAIKIRMV-GKKICVKNQ--------GE-I-VIDGELLHEVDVSSLWWVIN-GDVVD 73 (131)
T ss_dssp CCEEEEETTEEEEEEECC---CCSCEEEEEE-TTEEEEEET--------TE-E-EEEEEBSSCEEEEEEEEEEE-TTEEE
T ss_pred cEEEEecCCEEEEEEECCCCCCccceEEEEE-CCEEEEEEC--------CE-e-eEccccccccccccCEEEEe-CCEEE
Confidence 478889999999999995 999999999999 899999863 11 2 34568999999999999999 88899
Q ss_pred EEeecc
Q 009726 519 VRVPFE 524 (527)
Q Consensus 519 ItLPK~ 524 (527)
|+|-|.
T Consensus 74 i~L~K~ 79 (131)
T 2o30_A 74 VNVTKK 79 (131)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 999886
No 34
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=95.60 E-value=0.052 Score=47.60 Aligned_cols=77 Identities=14% Similarity=0.073 Sum_probs=66.4
Q ss_pred eeeEEEeCCEEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCCCCCceeeEEEEEeCCCCcccCCceEEeccCcEEEE
Q 009726 440 KINVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARIDPHLTSAVVTLHGQLFV 519 (527)
Q Consensus 440 ~vDV~Et~D~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e~~~~~~~F~R~~~LP~~VD~d~IsAsy~~nGVL~I 519 (527)
.++.+.+.+.+.|++.+|+. +++.|.+. .+.|.+++.-.. ....|.-.+.|-..|+++..+..+. ++-++|
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~-~~~l~~~~~~~~-----~~~~y~~~l~L~~~I~~e~S~~~v~-~~kiei 75 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFE-KSKLTFSCLGGS-----DNFKHLNEIDLFHCIDPNDSKHKRT-DRSILC 75 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEE-TTEEEEEEEETT-----TTEEEEEEEEBSSCEEEEEEEEEEC-SSCEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEE-CCEEEEEEEeCC-----CCceEEEEEEccceeccccCEEEEC-CCEEEE
Confidence 48899999999999999995 79999999 889999876311 1236888899999999999999998 889999
Q ss_pred EeeccC
Q 009726 520 RVPFEQ 525 (527)
Q Consensus 520 tLPK~~ 525 (527)
+|-|+.
T Consensus 76 ~L~K~~ 81 (125)
T 1ejf_A 76 CLRKGE 81 (125)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 999975
No 35
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=95.40 E-value=0.046 Score=48.19 Aligned_cols=77 Identities=13% Similarity=0.037 Sum_probs=63.3
Q ss_pred CeeeeEEEeCCEEEEEEEcC-C--CCCCCeEEEEecCCeEEEEEEecCCCCCCceeeEEEEEeCCCCcccCCceEEeccC
Q 009726 438 WVKINVQRTKDCFEVYALVP-G--LLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARIDPHLTSAVVTLH 514 (527)
Q Consensus 438 wv~vDV~Et~D~yvV~adLP-G--v~kEDI~VqVd~~~~LtIsGeR~~~e~~~~~~~F~R~~~LP~~VD~d~IsAsy~~n 514 (527)
...+..+.+.+.+.|++.|| | +.++||.|.+. .+.|.|...-. .+.-...|...|+++.-...+. +
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~-~~~l~v~~kg~---------~~~~~~~L~~~I~~e~s~w~i~-~ 75 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQ-RRHLRVGLKGQ---------PPVVDGELYNEVKVEESSWLIE-D 75 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEE-TTEEEEEETTS---------CCSBCSCBSSCBCSTTCEEEEE-T
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEEe-CCEEEEEECCc---------eEEEecccccccccccCEEEEc-C
Confidence 34578889999999999999 6 89999999999 99999986311 0112346889999999999999 8
Q ss_pred c-EEEEEeeccC
Q 009726 515 G-QLFVRVPFEQ 525 (527)
Q Consensus 515 G-VL~ItLPK~~ 525 (527)
| .|.|+|-|..
T Consensus 76 ~k~v~i~L~K~~ 87 (131)
T 1wfi_A 76 GKVVTVHLEKIN 87 (131)
T ss_dssp TTEEEEEEEBSS
T ss_pred CCEEEEEEEECC
Confidence 8 8999999875
No 36
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=95.07 E-value=0.1 Score=47.83 Aligned_cols=76 Identities=8% Similarity=-0.014 Sum_probs=64.4
Q ss_pred eeeeEEEeCCEEEEEEEcC-CCCCCCeEEEEecCCeEEEEEEecCCCCCCceeeEEEEEeCCCCcccCCceEEeccCcE-
Q 009726 439 VKINVQRTKDCFEVYALVP-GLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARIDPHLTSAVVTLHGQ- 516 (527)
Q Consensus 439 v~vDV~Et~D~yvV~adLP-Gv~kEDI~VqVd~~~~LtIsGeR~~~e~~~~~~~F~R~~~LP~~VD~d~IsAsy~~nGV- 516 (527)
..+..+.|.+.+.|++.|| |++.+||.|.+. .+.|.|... +. .+ -...|...|+++.-...+. +|-
T Consensus 14 ~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~-~~~L~v~~k--------g~-~~-l~g~L~~~I~~eeS~w~i~-~~k~ 81 (157)
T 2rh0_A 14 PWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQ-SRHVALAVG--------GR-EI-LKGKLFDSTIADEGTWTLE-DRKM 81 (157)
T ss_dssp SSEEEEECSSEEEEEEECCTTCCGGGEEEEEC-SSEEEEEET--------TE-EE-EEEEBSSCBCGGGCEEEEE-CCCE
T ss_pred CcEEEEecCCEEEEEEECCCCCcccceEEEEe-cCEEEEEEC--------CE-EE-EeeccccccCccccEEEEc-CCcE
Confidence 3588999999999999998 899999999999 899999763 11 22 4567999999999999999 875
Q ss_pred EEEEeeccCC
Q 009726 517 LFVRVPFEQT 526 (527)
Q Consensus 517 L~ItLPK~~~ 526 (527)
|.|+|-|...
T Consensus 82 v~I~L~K~~~ 91 (157)
T 2rh0_A 82 VRIVLTKTKR 91 (157)
T ss_dssp EEEEEEBSSC
T ss_pred EEEEEEEcCC
Confidence 9999999753
No 37
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=94.63 E-value=0.066 Score=48.86 Aligned_cols=77 Identities=14% Similarity=0.192 Sum_probs=64.0
Q ss_pred eeeEEEeCCEEEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCCCCCceeeEEEEEeCCCCcccCCceEEeccCcEEEE
Q 009726 440 KINVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARIDPHLTSAVVTLHGQLFV 519 (527)
Q Consensus 440 ~vDV~Et~D~yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e~~~~~~~F~R~~~LP~~VD~d~IsAsy~~nGVL~I 519 (527)
.++.+.+.+.+.|++.|+|+ +++.|.+.+.+.|.+++. . . ....|.-.+.|=..||++ .+.++. ..-++|
T Consensus 6 ~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~-~-~----~~~~y~~~l~L~~~Idpe-S~~~v~-~~kIei 75 (150)
T 2kmw_A 6 EVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL-G-A----QGERFEFSLELYGKIMTE-YRKNVG-LRNIIF 75 (150)
T ss_dssp CEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE-T-T----TTEEEEEEEEBSSCEEEE-EEEEEE-SSSEEE
T ss_pred cEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE-c-C----CCceEEEEeEhhhccccc-ceEEec-CCEEEE
Confidence 58999999999999999997 578888875679999987 1 1 124788889999999999 888888 788999
Q ss_pred EeeccCC
Q 009726 520 RVPFEQT 526 (527)
Q Consensus 520 tLPK~~~ 526 (527)
+|-|+.+
T Consensus 76 ~L~K~e~ 82 (150)
T 2kmw_A 76 SIQKEER 82 (150)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9999753
No 38
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=94.59 E-value=0.016 Score=51.69 Aligned_cols=81 Identities=11% Similarity=0.123 Sum_probs=59.6
Q ss_pred eeEEEeCCE-------EEEEEEcCCCCCCCeEEEEecCCeEEEEEEecCCCCCCceeeEEEEEeCCCCcccCCceEEecc
Q 009726 441 INVQRTKDC-------FEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPARIDPHLTSAVVTL 513 (527)
Q Consensus 441 vDV~Et~D~-------yvV~adLPGv~kEDI~VqVd~~~~LtIsGeR~~~e~~~~~~~F~R~~~LP~~VD~d~IsAsy~~ 513 (527)
++.+.+.+. +.|.+.+|++. ++.|.+. .+.|.+++......+......|.-.+.|...||++..+..+.
T Consensus 9 ~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~-~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~~v~- 84 (134)
T 2cg9_X 9 VAWAQRSSTTDPERNYVLITVSIADCD--APELTIK-PSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMHKVA- 84 (134)
T ss_dssp --CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBC-SSEEEECCEEC-------CEEBCEEEECSSCCCSSSEEEEEC-
T ss_pred EEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEE-CCEEEEEEecccccCCccCceEEEEEEChhhccccccEEEEC-
Confidence 555566655 89999999974 8889998 889999876421000001246888899999999999999999
Q ss_pred CcE-EEEEeeccC
Q 009726 514 HGQ-LFVRVPFEQ 525 (527)
Q Consensus 514 nGV-L~ItLPK~~ 525 (527)
++. |+|+|-|+.
T Consensus 85 ~~~~vei~L~K~~ 97 (134)
T 2cg9_X 85 NGQHYFLKLYKKD 97 (134)
T ss_dssp CC--CEEEEEECS
T ss_pred CCEEEEEEEEECC
Confidence 888 999999976
No 39
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=77.02 E-value=1.9 Score=31.97 Aligned_cols=39 Identities=21% Similarity=0.358 Sum_probs=28.7
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLD 318 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlp 318 (527)
+|...|..+|- +.|..||..|+- . .+..+|..|.+||.|
T Consensus 13 ~L~~~v~~~G~-------~~W~~Ia~~~~~---R--t~~qcr~Rw~~~L~P 51 (52)
T 1gvd_A 13 RLIKLVQKYGP-------KRWSVIAKHLKG---R--IGKQCRERWHNHLNP 51 (52)
T ss_dssp HHHHHHHHHCT-------TCHHHHHTTSTT---C--CHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHCc-------ChHHHHHHHcCC---C--CHHHHHHHHHHHcCc
Confidence 46677777772 469999999842 1 256889999999854
No 40
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=74.82 E-value=2.8 Score=30.92 Aligned_cols=39 Identities=18% Similarity=0.264 Sum_probs=28.5
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLD 318 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlp 318 (527)
+|...|..+|. +.|..||..|+- -.+..++..|.+||.|
T Consensus 13 ~L~~~v~~~G~-------~~W~~Ia~~~~~-----Rt~~qcr~Rw~~~L~P 51 (52)
T 1guu_A 13 KLKKLVEQNGT-------DDWKVIANYLPN-----RTDVQCQHRWQKVLNP 51 (52)
T ss_dssp HHHHHHHHHCS-------SCHHHHHHTSTT-----CCHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCC-------CCHHHHHHHcCC-----CCHHHHHHHHHHHcCc
Confidence 46667777763 469999999842 1256889999999854
No 41
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.58 E-value=2.6 Score=33.14 Aligned_cols=39 Identities=15% Similarity=0.188 Sum_probs=28.8
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLD 318 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlp 318 (527)
+|..+|..+| .+.|..||..|+- -.+..+|..|.+||.+
T Consensus 19 ~L~~~v~~~G-------~~~W~~Ia~~l~~-----Rt~~qcr~Rw~~~L~p 57 (70)
T 2dim_A 19 ILKAAVMKYG-------KNQWSRIASLLHR-----KSAKQCKARWYEWLDP 57 (70)
T ss_dssp HHHHHHHHTC-------SSCHHHHHHHSTT-----CCHHHHHHHHHHTSCS
T ss_pred HHHHHHHHHC-------cCCHHHHHHHhcC-----CCHHHHHHHHHHHcCC
Confidence 4666777777 2479999999952 1256789999998865
No 42
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=73.00 E-value=3.5 Score=31.61 Aligned_cols=38 Identities=21% Similarity=0.199 Sum_probs=27.9
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALL 317 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLl 317 (527)
+|..+|..+|- +.|..||..|+- . .+..+|.+|.+||.
T Consensus 18 ~L~~~v~~~G~-------~~W~~Ia~~~~~---R--t~~qcr~r~~~~l~ 55 (60)
T 1x41_A 18 ALLEAVMDCGF-------GNWQDVANQMCT---K--TKEECEKHYMKYFS 55 (60)
T ss_dssp HHHHHHHHTCT-------TCHHHHHHHHTT---S--CHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCc-------CcHHHHHHHhCC---C--CHHHHHHHHHHHcc
Confidence 35566777762 479999999943 1 25688999999986
No 43
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=70.89 E-value=5.1 Score=31.43 Aligned_cols=41 Identities=15% Similarity=0.185 Sum_probs=30.3
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLD 318 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlp 318 (527)
.|...|..+|. +.|..|+..|++. .-.+..+|..|..||.+
T Consensus 20 ~L~~~v~~~G~-------~~W~~Ia~~~~~~---~Rt~~qcr~Rw~~~l~p 60 (69)
T 1ity_A 20 NLRSGVRKYGE-------GNWSKILLHYKFN---NRTSVMLKDRWRTMKKL 60 (69)
T ss_dssp HHHHHHHHHCS-------SCHHHHHHHSCCS---SCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCC-------CcHHHHHHHcCcC---CCCHHHHHHHHHHHcCC
Confidence 46677777772 3699999999752 12256889999999865
No 44
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=69.51 E-value=5.9 Score=30.23 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=28.7
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALL 317 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLl 317 (527)
+|..+|.++|- +.|..||+.|+..+ .+..+|..|.+|++
T Consensus 19 ~L~~~v~~~G~-------~~W~~IA~~~~~~R----t~~qcr~r~~~~~~ 57 (58)
T 2elk_A 19 LLIDACETLGL-------GNWADIADYVGNAR----TKEECRDHYLKTYI 57 (58)
T ss_dssp HHHHHHHHTTT-------TCHHHHHHHHCSSC----CHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCc-------CCHHHHHHHHCCCC----CHHHHHHHHHHHcc
Confidence 57777888872 46999999997422 25677889988764
No 45
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=67.92 E-value=4.2 Score=30.92 Aligned_cols=39 Identities=15% Similarity=0.251 Sum_probs=27.8
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLD 318 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlp 318 (527)
+|..+|..+|- +.|..||..|.- . ....+|..|.+||.+
T Consensus 18 ~L~~~v~~~G~-------~~W~~Ia~~~~~---R--t~~qcr~Rw~~~l~p 56 (60)
T 2d9a_A 18 QLRALVRQFGQ-------QDWKFLASHFPN---R--TDQQCQYRWLRVLSG 56 (60)
T ss_dssp HHHHHHHHTCT-------TCHHHHHHHCSS---S--CHHHHHHHHHHTSCS
T ss_pred HHHHHHHHhCC-------CCHHHHHHHccC---C--CHHHHHHHHHHHcCC
Confidence 45666777662 479999999842 1 256889999998854
No 46
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.73 E-value=6.9 Score=31.00 Aligned_cols=46 Identities=11% Similarity=0.211 Sum_probs=30.7
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHHHH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYE 320 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlpYE 320 (527)
+|..+|..+|.-. +..+.|..||..|+- . ....+|.+|.+||.+-.
T Consensus 18 ~L~~~v~~~g~~~--~~~~~W~~IA~~~~~---R--t~~qcr~r~~~~l~~~~ 63 (75)
T 2yum_A 18 KLEQLLIKYPPEE--VESRRWQKIADELGN---R--TAKQVASQVQKYFIKLT 63 (75)
T ss_dssp HHHHHHHHSCCCS--CHHHHHHHHHHHHSS---S--CHHHHHHHHHHHHGGGS
T ss_pred HHHHHHHHhCCCC--CCcccHHHHHHHhCC---C--CHHHHHHHHHHHHHHHH
Confidence 4555666776211 122689999999953 1 25688999999997643
No 47
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=57.75 E-value=14 Score=27.31 Aligned_cols=39 Identities=15% Similarity=0.249 Sum_probs=28.5
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKAL 316 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyL 316 (527)
.|...|..+|. +.|..|+..|++.. -.+..++..|..+|
T Consensus 12 ~L~~~v~~~G~-------~~W~~Ia~~~~~~~---Rt~~qcr~Rw~~~~ 50 (53)
T 1w0t_A 12 NLRSGVRKYGE-------GNWSKILLHYKFNN---RTSVMLKDRWRTMK 50 (53)
T ss_dssp HHHHHHHHHCT-------TCHHHHHHHSCCSS---CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCc-------CCHHHHHHHcCCCC---CCHHHHHHHHHHHH
Confidence 47778888872 36999999997531 12567888888876
No 48
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=56.38 E-value=19 Score=28.35 Aligned_cols=42 Identities=5% Similarity=0.223 Sum_probs=30.0
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHHHHhh
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERH 322 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlpYE~~ 322 (527)
.|..+|..+|- .|..||..|+- - ....+|.+|.+||....+.
T Consensus 19 ~l~~~~~~~G~--------~W~~Ia~~~~~---R--t~~q~k~r~~~~l~~~~~~ 60 (72)
T 2cu7_A 19 LFEQGLAKFGR--------RWTKISKLIGS---R--TVLQVKSYARQYFKNKVKC 60 (72)
T ss_dssp HHHHHHHHTCS--------CHHHHHHHHSS---S--CHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHCc--------CHHHHHHHcCC---C--CHHHHHHHHHHHHHHHHhc
Confidence 45556666663 69999998843 1 2568899999998876543
No 49
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.03 E-value=18 Score=27.86 Aligned_cols=41 Identities=17% Similarity=0.224 Sum_probs=28.7
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHHHHhh
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERH 322 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlpYE~~ 322 (527)
+|...|..+| ..|..||..+| . .+..+|..|..||.+--+.
T Consensus 19 ~L~~~~~~~g--------~~W~~Ia~~~g--R----t~~qcr~Rw~~~l~~~~~~ 59 (66)
T 2din_A 19 KLLHLAKLMP--------TQWRTIAPIIG--R----TAAQCLEHYEFLLDKAAQR 59 (66)
T ss_dssp HHHHHHHHCT--------TCHHHHHHHHS--S----CHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcC--------CCHHHHhcccC--c----CHHHHHHHHHHHhChHhcC
Confidence 3555566665 26999999443 1 2568899999999887544
No 50
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=50.10 E-value=12 Score=31.55 Aligned_cols=39 Identities=21% Similarity=0.272 Sum_probs=28.0
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLD 318 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlp 318 (527)
+|..+|..+|. +.|..||..|+- - .+..++..|.+||.+
T Consensus 11 ~L~~~v~~~g~-------~~W~~Ia~~~~~---R--t~~qcr~Rw~~~L~p 49 (107)
T 2k9n_A 11 KLQQLVMRYGA-------KDWIRISQLMIT---R--NPRQCRERWNNYINP 49 (107)
T ss_dssp HHHHHHHHHCS-------SCHHHHHHHTTT---S--CHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHCC-------CCHHHHhhhcCC---C--CHHHHHHHHHHHHcc
Confidence 57778888884 469999999952 1 245677788877753
No 51
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=47.62 E-value=28 Score=27.20 Aligned_cols=40 Identities=8% Similarity=0.161 Sum_probs=27.9
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALL 317 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLl 317 (527)
+|...|.++|. +.|..|++.+.+... -+..+|.-|..++-
T Consensus 21 ~L~~~V~~~G~-------~~W~~Ia~~~~~~~R---t~~qcr~Rw~nl~k 60 (64)
T 3sjm_A 21 WVKAGVQKYGE-------GNWAAISKNYPFVNR---TAVMIKDRWRTMKR 60 (64)
T ss_dssp HHHHHHHHHCT-------TCHHHHHHHSCCSSC---CHHHHHHHHHHHHH
T ss_pred HHHHHHHccCC-------CchHHHHhhcCCCCC---CHHHHHHHHHHHhc
Confidence 46677887773 359999999876422 25678888877653
No 52
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=45.52 E-value=14 Score=30.66 Aligned_cols=38 Identities=18% Similarity=0.354 Sum_probs=26.9
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALL 317 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLl 317 (527)
+|..+|..+|. +.|..||..|+- - .+..++..|.++|.
T Consensus 14 ~L~~~v~~~g~-------~~W~~Ia~~l~~---R--t~~qcr~Rw~~~l~ 51 (105)
T 1gv2_A 14 RVIKLVQKYGP-------KRWSVIAKHLKG---R--IGKQCRERWHNHLN 51 (105)
T ss_dssp HHHHHHHHHCT-------TCHHHHHTTSTT---C--CHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCC-------CcHHHHhhhhcC---C--CHHHHHHHHHhccC
Confidence 56677777775 469999999832 1 24577888888774
No 53
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=44.87 E-value=13 Score=30.36 Aligned_cols=35 Identities=14% Similarity=0.152 Sum_probs=24.6
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHh
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKA 315 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKy 315 (527)
+|..+|..+| +.|..||+.|+- + ...+++.+|.++
T Consensus 28 ~Ll~~v~~~G--------~~W~~IA~~v~~-R----T~~qcr~r~~~~ 62 (79)
T 2yus_A 28 LLLEALEMYK--------DDWNKVSEHVGS-R----TQDECILHFLRL 62 (79)
T ss_dssp HHHHHHHHSS--------SCHHHHHHHHSS-C----CHHHHHHHHTTS
T ss_pred HHHHHHHHhC--------CCHHHHHHHcCC-C----CHHHHHHHHHHh
Confidence 4555677777 469999999963 1 255778888765
No 54
>2yrv_A AT-rich interactive domain-containing protein 4A; ARID domain-containing protein 4A, retinoblastoma-binding protein 1, RBBP-1, structural genomics; NMR {Homo sapiens}
Probab=37.87 E-value=8.1 Score=34.45 Aligned_cols=23 Identities=4% Similarity=-0.006 Sum_probs=17.7
Q ss_pred cCCCCCCCCcccccccccccccccc
Q 009726 175 TPNRNAAPSDTELKNVNDTEIKDKV 199 (527)
Q Consensus 175 ~~~~~~~~~~~e~~~~~~~e~~~~~ 199 (527)
...-+|++|+|||+++ +|+++++
T Consensus 94 ~~~~lP~~W~~d~~ei--ldssss~ 116 (117)
T 2yrv_A 94 KTRVVPDNWKMDISEI--LESGPSS 116 (117)
T ss_dssp HTCCCCTTTCCSSHHH--HSSTTTC
T ss_pred hcCCCCCcccchhHhh--cccccCC
Confidence 3456899999999999 5566553
No 55
>2lpy_A Matrix protein P10; GAG, myristoylated, myristate, viral protein; HET: MYR; NMR {Mason-pfizer monkey virus}
Probab=37.01 E-value=66 Score=28.85 Aligned_cols=81 Identities=19% Similarity=0.404 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeeCCeeechhhHHHHHhhcCcceee---ccCcchhHHHhhcC------CCCCCCcH
Q 009726 234 EEQSSFMEELENFFRDRSMEFKPPKFYGEGLNCLKLWRAVTRLGGYEKV---TSCKLWRQVGESFK------PPKTCTTV 304 (527)
Q Consensus 234 eEr~~Fl~~L~~F~e~RGtp~k~P~IgGK~LDLykLYkaV~~~GGydkV---t~~KkW~eVa~~Lg------lP~t~tSa 304 (527)
-.+..|+..|+.++++||..++. =||..+|..|.+..=+=.. ..-+.|..|++.|. -|....--
T Consensus 5 s~~~~fi~~Lk~~LK~rGvkV~~-------k~L~~Ff~~i~~~cPWFp~eGtLd~~~W~kVG~~L~~~~~~~~~~~iP~~ 77 (124)
T 2lpy_A 5 SQHERYVEQLKQALKTRGVKVKY-------ADLLKFFDFVKDTCPWFPQEGTIDIKRWRRVGDCFQDYYNTFGPEKVPVT 77 (124)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCCH-------HHHHHHHHHHHHHCTTCTTTCCCCSHHHHHHHHHHHHHHHTTCCSSCCTH
T ss_pred hHHHHHHHHHHHHHHHCCeeecH-------HHHHHHHHHHHHhCCCcCCCCccCHHHHHHHHHHHHHHHHHhCCCcCChh
Confidence 34678999999999999987754 4788888888754322111 33678999998883 23333333
Q ss_pred HHHHHHHHHHhHHHHHh
Q 009726 305 SWTFRGFYEKALLDYER 321 (527)
Q Consensus 305 s~~LK~~YeKyLlpYE~ 321 (527)
.+.+=.+-.-+|.+.++
T Consensus 78 ~~~~W~LI~~~Le~~~~ 94 (124)
T 2lpy_A 78 AFSYWNLIKELIDKKEV 94 (124)
T ss_dssp HHHHHHHHHHHHHCSCS
T ss_pred HHHHHHHHHHHHccccc
Confidence 55555555555655443
No 56
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=36.55 E-value=51 Score=27.60 Aligned_cols=44 Identities=14% Similarity=0.234 Sum_probs=31.9
Q ss_pred hhHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHHHHhhh
Q 009726 267 LKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHK 323 (527)
Q Consensus 267 ykLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlpYE~~~ 323 (527)
..|...|..+| +.|..|+..|. . - ....+|..|..++....++.
T Consensus 62 ~~L~~~~~~~G--------~~W~~Ia~~l~--g-R--t~~~~k~rw~~l~r~~~~~~ 105 (107)
T 2k9n_A 62 MLLDQKYAEYG--------PKWNKISKFLK--N-R--SDNNIRNRWMMIARHRAKHQ 105 (107)
T ss_dssp HHHHHHHHHTC--------SCHHHHHHHHS--S-S--CHHHHHHHHHHHHHHHHSST
T ss_pred HHHHHHHHHhC--------cCHHHHHHHCC--C-C--CHHHHHHHHHHHHhhHHHhh
Confidence 35777788887 36999999883 2 2 25678999998887766553
No 57
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=33.94 E-value=31 Score=29.79 Aligned_cols=39 Identities=18% Similarity=0.336 Sum_probs=27.9
Q ss_pred hhHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHH
Q 009726 267 LKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALL 317 (527)
Q Consensus 267 ykLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLl 317 (527)
-+|...|..+|. +.|..||..|+- - .+..++..|.++|.
T Consensus 36 ~~L~~~v~~~g~-------~~W~~Ia~~l~~---R--t~~qcr~Rw~~~l~ 74 (128)
T 1h8a_C 36 QRVIEHVQKYGP-------KRWSDIAKHLKG---R--IGKQCRERWHNHLN 74 (128)
T ss_dssp HHHHHHHHHTCS-------CCHHHHHHHSSS---C--CHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCC-------CCHHHHHHHhcC---C--cHHHHHHHHHHhcc
Confidence 356777888774 469999999842 1 24577888888774
No 58
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=33.58 E-value=1.2e+02 Score=24.92 Aligned_cols=34 Identities=18% Similarity=0.087 Sum_probs=27.7
Q ss_pred EEEEEEEcC-CCCCCCeEEEEecCCeEEEEEEecCC
Q 009726 449 CFEVYALVP-GLLREEVRVQSDPAGRLVISGEPEHP 483 (527)
Q Consensus 449 ~yvV~adLP-Gv~kEDI~VqVd~~~~LtIsGeR~~~ 483 (527)
.|.-.+.|| +++.+.|+-.+. +|.|+|+-.+...
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~-~GvL~I~lpK~~~ 96 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLA-GGVLTVRFEKLRP 96 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEE-TTEEEEEEEBSSC
T ss_pred EEEEEEECCCCcchhHcEEEEE-CCEEEEEEEccCc
Confidence 344467789 589999999999 9999999887654
No 59
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=32.46 E-value=51 Score=26.53 Aligned_cols=31 Identities=6% Similarity=0.146 Sum_probs=27.7
Q ss_pred eEEEEEeCCCCcccCCceEEeccCcEEEEEeec
Q 009726 491 PFKKVVSLPARIDPHLTSAVVTLHGQLFVRVPF 523 (527)
Q Consensus 491 ~F~R~~~LP~~VD~d~IsAsy~~nGVL~ItLPK 523 (527)
.|.=.+.|| .++++.|+-.+. +|+|+|+-=+
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~-~~~L~I~g~~ 38 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTK-DGVVEITGKH 38 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEE-TTEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEE-CCEEEEEEEE
Confidence 788889998 799999999999 9999998654
No 60
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=31.16 E-value=51 Score=27.28 Aligned_cols=38 Identities=18% Similarity=0.467 Sum_probs=27.0
Q ss_pred hhHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHH
Q 009726 267 LKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALL 317 (527)
Q Consensus 267 ykLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLl 317 (527)
..|..+|..+| +.|..|+..| |. -+ ...++..|..+|-
T Consensus 65 ~~L~~~~~~~G--------~~W~~Ia~~l--~g-Rt--~~~~k~rw~~~~~ 102 (105)
T 1gv2_A 65 RIIYQAHKRLG--------NRWAEIAKLL--PG-RT--DNAIKNHWNSTMR 102 (105)
T ss_dssp HHHHHHHHHHS--------SCHHHHHTTC--TT-CC--HHHHHHHHHHHTC
T ss_pred HHHHHHHHHhC--------CCHHHHHHHc--CC-CC--HHHHHHHHHHHHh
Confidence 45777788887 3699999987 22 22 4678888887763
No 61
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=30.58 E-value=62 Score=25.99 Aligned_cols=29 Identities=3% Similarity=0.004 Sum_probs=22.1
Q ss_pred CcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHHH
Q 009726 285 CKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDY 319 (527)
Q Consensus 285 ~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlpY 319 (527)
.++|..||..|| + ....++.+|..+....
T Consensus 31 ~~RW~~IA~~lg--R----t~~eV~~~y~~L~~d~ 59 (72)
T 2cqq_A 31 PGRWEKIAHELG--R----SVTDVTTKAKQLKDSV 59 (72)
T ss_dssp TTHHHHHHHHHT--S----CHHHHHHHHHHHHHSC
T ss_pred CcHHHHHHHHhC--C----CHHHHHHHHHHHHHhc
Confidence 467999999985 2 2567888998886653
No 62
>1fex_A TRF2-interacting telomeric RAP1 protein; helix turn helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Synthetic} SCOP: a.4.1.3
Probab=30.27 E-value=45 Score=25.78 Aligned_cols=46 Identities=20% Similarity=0.227 Sum_probs=30.2
Q ss_pred hHHHHHhhcCcc-eeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHH
Q 009726 268 KLWRAVTRLGGY-EKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALL 317 (527)
Q Consensus 268 kLYkaV~~~GGy-dkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLl 317 (527)
.|+..|...... ..|+.++.|.++++.. +|.. | -.+.|..|.|+|-
T Consensus 12 ~L~~~v~~~~~~~~~~~Gn~iwk~la~~~-~~~H-t--wqSwRdRy~k~l~ 58 (59)
T 1fex_A 12 AILTYVKENARSPSSVTGNALWKAMEKSS-LTQH-S--WQSLKDRYLKHLR 58 (59)
T ss_dssp HHHHHHHHTCCSTTTTTSSHHHHHHHHSC-SSSC-C--SHHHHHHHHHHTC
T ss_pred HHHHHHHHhccccCCCccHHHHHHHHHhH-CCCC-C--HHHHHHHHHHHcc
Confidence 456666555211 3578899999999832 2322 2 4678999999873
No 63
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=29.38 E-value=55 Score=26.42 Aligned_cols=28 Identities=7% Similarity=0.151 Sum_probs=20.5
Q ss_pred CcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHH
Q 009726 285 CKLWRQVGESFKPPKTCTTVSWTFRGFYEKALL 317 (527)
Q Consensus 285 ~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLl 317 (527)
.++|..||..|+- .| ...++.+|..++.
T Consensus 41 ~~rW~~IA~~vpG---RT--~~qcr~Ry~~L~~ 68 (73)
T 2cqr_A 41 SDCWDKIARCVPS---KS--KEDCIARYKLLVS 68 (73)
T ss_dssp HHHHHHHGGGCSS---SC--HHHHHHHHHHHHS
T ss_pred CchHHHHHHHcCC---CC--HHHHHHHHHHHHH
Confidence 3679999999942 22 5678888887764
No 64
>1xg7_A Hypothetical protein; southeast collaboratory for structural genomics, secsg, hyperthermophIle, pyrococcus FU protein structure initiative; 1.88A {Pyrococcus furiosus} SCOP: a.96.1.6
Probab=27.16 E-value=40 Score=33.50 Aligned_cols=51 Identities=16% Similarity=0.261 Sum_probs=42.7
Q ss_pred CcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHHHHhhhhcCCCCCCCccc
Q 009726 285 CKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTSGGELSLPVAS 335 (527)
Q Consensus 285 ~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlpYE~~~~~~ge~~~Pi~s 335 (527)
...|.++|..||-.+..-++.+++|-+|.-+...|=++..-..+.++|+|.
T Consensus 135 ~~l~~~LA~~l~s~~~~KTIVFAvKM~~Ya~r~~~g~~~p~p~~IpIPvD~ 185 (250)
T 1xg7_A 135 KMLWKALIKIMGSREDSKTIVFTVKMFGYASRIAFSRFIPYPMEIPIPEDL 185 (250)
T ss_dssp HHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHTTSCCCCCTTSCCCCCH
T ss_pred HHHHHHHHHHhCCCCCcceeehHHHHHHHHHHHHcCCCCCCCCCCCCcchH
Confidence 468999999999987777899999999988888877666667788888774
No 65
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=27.02 E-value=67 Score=25.96 Aligned_cols=31 Identities=13% Similarity=0.094 Sum_probs=27.3
Q ss_pred eEEEEEeCCCCcccCCceEEeccCcEEEEEeec
Q 009726 491 PFKKVVSLPARIDPHLTSAVVTLHGQLFVRVPF 523 (527)
Q Consensus 491 ~F~R~~~LP~~VD~d~IsAsy~~nGVL~ItLPK 523 (527)
.|.=.+.|| +++.+.|+-.+. +|.|+|+.-+
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~-~~~L~I~g~~ 37 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVL-GDVIEVHGKH 37 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEE-TTEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEE-CCEEEEEEEE
Confidence 677889998 899999999999 9999998643
No 66
>1xqo_A 8-oxoguanine DNA glycosylase; helix-hairpin-helix, archaea, P.aerophilum, PA-AGOG native, DNA repair, lyase; 1.03A {Pyrobaculum aerophilum} SCOP: a.96.1.6 PDB: 1xqp_A*
Probab=26.90 E-value=44 Score=33.30 Aligned_cols=51 Identities=12% Similarity=0.096 Sum_probs=41.1
Q ss_pred CcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHHHHhhhhcCCCCCCCccc
Q 009726 285 CKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTSGGELSLPVAS 335 (527)
Q Consensus 285 ~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlpYE~~~~~~ge~~~Pi~s 335 (527)
...|.+++..||-.+..-++.+++|-+|.-+...|-....-..+.++|+|.
T Consensus 123 ~~l~~~LA~~l~s~~~~KTIVFAvKM~~Ya~r~~~g~~~~~p~~IpIPvD~ 173 (256)
T 1xqo_A 123 GLTLRQLSHIVGARREQKTLVFTIKILNYAYMCSRGVNRVLPFDIPIPVDY 173 (256)
T ss_dssp HHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHTCCCCCCTTSCCCCCH
T ss_pred HHHHHHHHHHhCCCCCcceeeeHHHHHHHHHHHHcCCCCCCCCCCCCCchH
Confidence 678999999999987777899999999988888655544455777788763
No 67
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=25.78 E-value=52 Score=28.41 Aligned_cols=37 Identities=24% Similarity=0.379 Sum_probs=24.8
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALL 317 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLl 317 (527)
+|..+|..+|. .|..||..|+- - .+..++..|.++|.
T Consensus 21 ~L~~~v~~~G~--------~W~~Ia~~~~~---R--t~~qcr~Rw~~~l~ 57 (126)
T 3osg_A 21 MLKRAVAQHGS--------DWKMIAATFPN---R--NARQCRDRWKNYLA 57 (126)
T ss_dssp HHHHHHHHHTT--------CHHHHHHTCTT---C--CHHHHHHHHHHHTS
T ss_pred HHHHHHHHhCC--------CHHHHHHHcCC---C--CHHHHHHHHhhhcc
Confidence 35555666653 49999999842 1 24577888888874
No 68
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=25.43 E-value=62 Score=28.02 Aligned_cols=39 Identities=10% Similarity=0.308 Sum_probs=28.4
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHHH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDY 319 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlpY 319 (527)
.|...|..+|+ .|..|+..|.- - ....++..|..+|..-
T Consensus 64 ~L~~~~~~~G~--------~W~~Ia~~l~g---R--t~~~~k~rw~~~l~~~ 102 (131)
T 3zqc_A 64 TIFRNYLKLGS--------KWSVIAKLIPG---R--TDNAIKNRWNSSISKR 102 (131)
T ss_dssp HHHHHHHHSCS--------CHHHHTTTSTT---C--CHHHHHHHHHHTTGGG
T ss_pred HHHHHHHHHCc--------CHHHHHHHcCC---C--CHHHHHHHHHHHHHHH
Confidence 56777888884 69999998732 2 2457899998888653
No 69
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=25.13 E-value=73 Score=26.38 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=27.5
Q ss_pred eEEEEEeCCCCcccCCceEEeccCcEEEEEeec
Q 009726 491 PFKKVVSLPARIDPHLTSAVVTLHGQLFVRVPF 523 (527)
Q Consensus 491 ~F~R~~~LP~~VD~d~IsAsy~~nGVL~ItLPK 523 (527)
.|.=.+.|| +++.+.|+-.+. +|.|+|+-=+
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v~-~~~L~I~g~~ 42 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKVV-GDHVEVHARH 42 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEEE-TTEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEE-CCEEEEEEEE
Confidence 688889998 899999999999 9999998644
No 70
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=23.80 E-value=46 Score=28.89 Aligned_cols=39 Identities=13% Similarity=0.084 Sum_probs=26.9
Q ss_pred hHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHH
Q 009726 268 KLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLD 318 (527)
Q Consensus 268 kLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlp 318 (527)
+|-.+|..+|. +.|..||..|+- - .+..++..|.+||.+
T Consensus 12 ~L~~~v~~~g~-------~~W~~Ia~~~~~---R--t~~qcr~Rw~~~l~p 50 (131)
T 3zqc_A 12 LIREYVKENGP-------QNWPRITSFLPN---R--SPKQCRERWFNHLDP 50 (131)
T ss_dssp HHHHHHHHHCS-------CCGGGGTTSCTT---S--CHHHHHHHHHHHTST
T ss_pred HHHHHHHHhCc-------CCHHHHHHHHCC---C--CHHHHHHHHhhccCc
Confidence 46667777762 359999998832 1 245678888888854
No 71
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=23.75 E-value=1.7e+02 Score=24.57 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=24.8
Q ss_pred CcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHHHHHhhh
Q 009726 285 CKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHK 323 (527)
Q Consensus 285 ~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLlpYE~~~ 323 (527)
..+|..||..|+- . ....++.+|..++.......
T Consensus 31 ~~rW~~IA~~vpG---R--T~~q~k~ry~~l~~dv~~ie 64 (93)
T 2cjj_A 31 PDRWANVARAVEG---R--TPEEVKKHYEILVEDIKYIE 64 (93)
T ss_dssp TTHHHHHHHHSTT---C--CHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHcCC---C--CHHHHHHHHHHHHHHHHHhh
Confidence 4689999999952 2 25688999998877655443
No 72
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=20.69 E-value=72 Score=28.38 Aligned_cols=39 Identities=18% Similarity=0.331 Sum_probs=27.9
Q ss_pred hhHHHHHhhcCcceeeccCcchhHHHhhcCCCCCCCcHHHHHHHHHHHhHH
Q 009726 267 LKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALL 317 (527)
Q Consensus 267 ykLYkaV~~~GGydkVt~~KkW~eVa~~LglP~t~tSas~~LK~~YeKyLl 317 (527)
.+|...|..+|. +.|..|+..|.- - ....++..|..+|.
T Consensus 67 ~~L~~~v~~~g~-------~~W~~Ia~~l~~---R--t~~qcr~Rw~~~l~ 105 (159)
T 1h89_C 67 QRVIKLVQKYGP-------KRWSVIAKHLKG---R--IGKQCRERWHNHLN 105 (159)
T ss_dssp HHHHHHHHHHCS-------CCHHHHHHTSTT---C--CHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCc-------ccHHHHHHHcCC---C--CHHHHHHHHHHHhC
Confidence 357777888874 469999999832 1 25677888888774
Done!