Query 009727
Match_columns 527
No_of_seqs 269 out of 2298
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 11:40:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009727.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009727hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 8.4E-90 2.9E-94 737.6 50.6 502 21-524 2-516 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 2E-86 7E-91 709.8 48.7 487 25-521 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 3.3E-81 1.1E-85 675.0 46.0 488 20-522 5-497 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 1.2E-75 4.2E-80 625.3 41.0 455 25-522 2-473 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 2.8E-72 9.4E-77 602.0 43.3 451 40-520 8-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 1.5E-68 5.2E-73 577.2 41.7 456 27-520 24-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 5.9E-68 2E-72 572.8 44.4 462 21-522 16-521 (521)
8 1zr6_A Glucooligosaccharide ox 100.0 2.3E-67 7.7E-72 566.3 40.3 458 21-522 4-480 (503)
9 2y3s_A TAML; oxidoreductase; H 100.0 6.9E-67 2.4E-71 564.7 44.0 450 42-521 34-528 (530)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 9.5E-66 3.3E-70 548.9 33.6 432 41-520 13-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 2.8E-41 9.5E-46 366.4 35.7 229 22-267 30-269 (534)
12 4bby_A Alkyldihydroxyacetoneph 100.0 4.4E-37 1.5E-41 340.4 27.1 203 65-268 198-409 (658)
13 3pm9_A Putative oxidoreductase 100.0 7.3E-36 2.5E-40 318.2 23.2 204 64-269 43-253 (476)
14 2exr_A Cytokinin dehydrogenase 100.0 5.1E-34 1.7E-38 308.1 37.3 202 64-269 53-264 (524)
15 4feh_A Oxidoreductase DPRE1; a 100.0 7E-33 2.4E-37 295.4 33.7 197 64-268 35-237 (481)
16 2vfr_A Xylitol oxidase, aldito 100.0 4.1E-31 1.4E-35 278.8 30.8 175 64-249 12-189 (422)
17 2uuu_A Alkyldihydroxyacetoneph 100.0 5.1E-32 1.8E-36 294.9 21.5 200 69-269 134-340 (584)
18 1wvf_A 4-cresol dehydrogenase 100.0 8.1E-31 2.8E-35 283.4 23.7 199 70-270 54-267 (520)
19 2i0k_A Oxidoreductase; MIX alp 100.0 7.5E-30 2.6E-34 277.5 17.2 199 41-249 9-227 (561)
20 1e8g_A Vanillyl-alcohol oxidas 100.0 8.7E-29 3E-33 269.4 24.2 200 69-270 67-299 (560)
21 3js8_A Cholesterol oxidase; ch 100.0 3.2E-29 1.1E-33 267.3 16.8 179 64-247 21-221 (540)
22 1f0x_A DLDH, D-lactate dehydro 100.0 3.6E-29 1.2E-33 270.8 15.9 198 69-269 42-298 (571)
23 3i99_A UDP-N-acetylenolpyruvoy 99.9 2E-25 7E-30 227.6 14.5 165 69-245 27-199 (357)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.9 1.6E-25 5.3E-30 226.2 12.3 165 69-245 51-217 (322)
25 1uxy_A MURB, uridine diphospho 99.9 5.7E-24 1.9E-28 216.3 17.4 165 69-245 11-183 (340)
26 1hsk_A UDP-N-acetylenolpyruvoy 99.9 9.4E-25 3.2E-29 221.8 11.6 160 69-243 45-209 (326)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 4.7E-23 1.6E-27 202.5 9.8 152 70-244 20-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 2.5E-19 8.6E-24 171.0 10.5 117 130-252 1-123 (219)
29 1ffv_C CUTM, flavoprotein of c 98.2 1.8E-06 6.3E-11 85.5 8.3 155 72-243 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.5 0.00016 5.5E-09 71.5 8.1 154 72-242 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 97.3 0.00015 5.2E-09 76.2 4.9 151 75-242 179-345 (462)
32 1t3q_C Quinoline 2-oxidoreduct 96.6 0.0031 1.1E-07 62.1 6.9 152 72-241 4-174 (288)
33 3nvz_B Xanthine dehydrogenase/ 96.5 0.0057 2E-07 60.8 8.1 153 72-242 9-190 (305)
34 3hrd_C Nicotinate dehydrogenas 93.5 0.082 2.8E-06 52.1 5.7 77 73-152 3-82 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 89.0 0.41 1.4E-05 47.6 5.3 76 72-153 5-84 (324)
36 1wvf_A 4-cresol dehydrogenase 83.3 1.6 5.3E-05 46.4 6.5 28 487-514 481-509 (520)
37 3unc_A Xanthine dehydrogenase/ 76.7 2.2 7.6E-05 50.4 5.4 80 72-155 232-313 (1332)
38 2i0k_A Oxidoreductase; MIX alp 56.2 3.8 0.00013 43.9 1.6 23 494-516 533-555 (561)
39 2uuu_A Alkyldihydroxyacetoneph 53.6 17 0.00059 38.9 6.3 29 485-513 550-579 (584)
40 1f0x_A DLDH, D-lactate dehydro 51.5 7.4 0.00025 41.7 2.9 28 492-521 535-562 (571)
41 1e8g_A Vanillyl-alcohol oxidas 48.8 21 0.00072 38.0 6.0 21 494-514 523-543 (560)
42 3js8_A Cholesterol oxidase; ch 46.7 6.9 0.00024 41.5 1.7 23 493-515 511-533 (540)
43 1xty_A PTH, peptidyl-tRNA hydr 45.8 21 0.00072 29.7 4.3 41 64-106 48-89 (120)
44 3zyv_A AOH1; oxidoreductase, m 38.7 18 0.00063 42.8 3.8 77 75-156 242-321 (1335)
45 1wn2_A Peptidyl-tRNA hydrolase 32.0 65 0.0022 26.7 5.2 37 70-106 53-90 (121)
46 1rzw_A Protein AF2095(GR4); be 27.7 82 0.0028 26.2 5.0 37 71-107 47-84 (123)
47 1rlk_A Hypothetical protein TA 27.5 67 0.0023 26.4 4.5 38 70-107 49-87 (117)
48 2zv3_A PTH, peptidyl-tRNA hydr 27.2 65 0.0022 26.4 4.3 37 70-106 47-84 (115)
49 3p04_A Uncharacterized BCR; SE 23.7 85 0.0029 24.4 4.1 34 74-129 7-40 (87)
50 1q7s_A BIT1, protein CGI-147; 23.3 1.2E+02 0.004 24.9 5.2 36 71-106 50-86 (117)
51 2lnd_A De novo designed protei 22.1 94 0.0032 23.6 3.8 33 75-107 30-62 (112)
52 1yht_A DSPB; beta barrel, hydr 21.5 55 0.0019 32.7 3.4 28 80-107 92-121 (367)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=8.4e-90 Score=737.61 Aligned_cols=502 Identities=49% Similarity=0.950 Sum_probs=433.5
Q ss_pred CchhhHHHhhhhccCCCCCCcceEecCCCcchhHHHhhcccCcCccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcEE
Q 009727 21 SIQEDFMHCMSTQFGEYTRSFEIIFNQDSSLYSYILQSSVQNPRYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQIR 100 (527)
Q Consensus 21 ~~~~~~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~ 100 (527)
.+.++|.+||+....++.++++.|++|+|+.|++++.++++|.||+.....+|.+||+|+|++||+++|++|+++++|+.
T Consensus 2 ~~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~ 81 (518)
T 3vte_A 2 NPRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIR 81 (518)
T ss_dssp CHHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEE
T ss_pred ChhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEE
Confidence 46789999999987777788899999999999999888999999999888999999999999999999999999999999
Q ss_pred EEcCCCCCCCCccccCCCeEEEEcCCCCCeEEcCCCCEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCccccccccccC
Q 009727 101 VRSGGHDYEGLSYLCRTPFIIIDLINMRSIEINLEDETAWVQSGANLGELYYALAMKSLVHGFPAGLCPTVGIGGHLGGG 180 (527)
Q Consensus 101 v~ggGh~~~g~s~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~gg 180 (527)
|||||||+.+.+...+.++++|||++||+|++|++.++|+||||+++++|+++|.++|+++.+++|.|+++||||+++||
T Consensus 82 vrggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gG 161 (518)
T 3vte_A 82 TRSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGG 161 (518)
T ss_dssp EESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTC
T ss_pred EECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCC
Confidence 99999999987643444699999999999999999999999999999999999999887788999999999999999999
Q ss_pred cCCCccccccccccceeEEEEEeeCCeEeecccCChhhhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEecch-hh
Q 009727 181 GFGTLLRKYGLAADQVVDAYLIDVNGRILDRRAMGEDLFWAIRGGGGSSFGIILSWKIKLVRVPETVTSFTVLKTLE-QG 259 (527)
Q Consensus 181 g~g~~~~~~G~~~D~v~~~~vV~~~G~i~~~~~~~~dL~~a~rG~~~g~~GIVt~~~lkl~p~~~~~~~~~~~~~~~-~~ 259 (527)
|+|+++++||+++|+|+++|||++||++++.+.+++|||||+|||++|+|||||+++||++|.|+.+..|.+.+... ++
T Consensus 162 g~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~ 241 (518)
T 3vte_A 162 GYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHG 241 (518)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHH
T ss_pred CCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHH
Confidence 99999999999999999999999999999855568999999999867899999999999999999888888777643 67
Q ss_pred HHHHHHHHHHhcccCCCCceEEEEEEeecC-----CCCcceEEEEEEEEecCccchhhhhcccCCcCCCCcccceecchH
Q 009727 260 ALELVHRWQYIAPKFHEDLFIRILIVHVGN-----GDQKTIHANFNSLFLGKIDRLIPLMNQSFPELGLRAEDCTEMSWV 334 (527)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 334 (527)
+.+++.+|++++.++|+++++.+.+...+. .++..+.+.+.++|+|+++++++.+.+.|++++....++.+++|.
T Consensus 242 ~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~ 321 (518)
T 3vte_A 242 LVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWI 321 (518)
T ss_dssp HHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHH
T ss_pred HHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchh
Confidence 789999999999999999999887765321 111235678899999999999888888888888766788999999
Q ss_pred HHHHhhhcCCCC-Cc---hhhhhccccccccccccccccccCCCCHhHHHHHHHHHhcC--CceEEEEEecCcccccCCC
Q 009727 335 ESTVYFAGFSKG-SP---LEMLLDKKQLFKSMFKAKSDFVTEPIPFHALEGIWGRLLEE--EMAIMIMDPFGGKMNEILE 408 (527)
Q Consensus 335 ~~~~~~~~~~~g-~~---~~~~l~~~~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~gga~~~~~~ 408 (527)
+.+.++...+.+ .+ ++.++++......+||.||+|+.++++++.++.+++.+.+. +.+.+.++++||++++++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~~ 401 (518)
T 3vte_A 322 DTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEISE 401 (518)
T ss_dssp HHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSCT
T ss_pred hhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCCC
Confidence 998887755433 33 45555554333456789999999899999999999988763 3567899999999999999
Q ss_pred CCCCCcccCCceEEEEEEEEeCCCcccchhhHHHHHHHHHHhhcccccCCCCccccCCCCcccC-CcccCCcchHHhhhh
Q 009727 409 SEVPFPHRNGVLYNIQYMVKWEANGVMASNRHIHWIRSLYKYMAPYVSRSPRAAYINYRDLDLG-TNKLQNASYSEAAAW 487 (527)
Q Consensus 409 ~~taf~~R~~~~~~~~~~~~W~~~~~d~~~~~~~~~~~~~~~l~p~~~~~~~g~Y~Ny~d~~l~-~~~~~~~~~~~~~~w 487 (527)
++|||+||++.+|.+++.+.|.++..+ +...+|++++++.|.|+.+..++++|+||+|.+++ .+...|++++....|
T Consensus 402 ~~TAf~hR~~~~~~~~~~~~w~~~~~~--~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~w 479 (518)
T 3vte_A 402 SAIPFPHRAGIMYELWYTASWEKQEDN--EKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARIW 479 (518)
T ss_dssp TSSSCCCCTTCCEEEEEEEEECCTTTH--HHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHHH
T ss_pred CCCcccccCcceEEEEEEEecCCcchh--HHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhhH
Confidence 999999999558999999999865543 67899999999999999766667999999999887 433446677777889
Q ss_pred HhhhhcccHHHHHHHHhccCCCCCcccCCCCCCcccC
Q 009727 488 GIKYFKSNFKRLALVKSKVDPGNFFRNEQSIPPFGEI 524 (527)
Q Consensus 488 ~~~yyg~n~~RL~~IK~kyDP~~vF~~~~~i~~~~~~ 524 (527)
++.|||+||+||++||+||||+|||+++|||+|...-
T Consensus 480 ~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~~ 516 (518)
T 3vte_A 480 GEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPPH 516 (518)
T ss_dssp HHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCTT
T ss_pred HHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCCC
Confidence 9999999999999999999999999999999998663
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=2e-86 Score=709.83 Aligned_cols=487 Identities=43% Similarity=0.792 Sum_probs=421.2
Q ss_pred hHHHhhhhccCCCCCCcceEecCCCcchhHHHhhcccCcCccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcC
Q 009727 25 DFMHCMSTQFGEYTRSFEIIFNQDSSLYSYILQSSVQNPRYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSG 104 (527)
Q Consensus 25 ~~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~gg 104 (527)
+|.+||+....++ ++.|++|+|+.|+++++++++|.||+....++|.+|++|+|++||+++|++|+++++|+.||||
T Consensus 1 ~~~~cl~~~~~~~---~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGg 77 (495)
T 3fw9_A 1 DLLSCLTFNGVRN---HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSG 77 (495)
T ss_dssp CHHHHHHHTTCCC---EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESS
T ss_pred ChhHHHhhcCCCC---CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 4789999876432 6789999999999998888999999998899999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCeEEEEcCCCCCeEEcCCCCEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCccccccccccCcCCC
Q 009727 105 GHDYEGLSYLCRTPFIIIDLINMRSIEINLEDETAWVQSGANLGELYYALAMKSLVHGFPAGLCPTVGIGGHLGGGGFGT 184 (527)
Q Consensus 105 Gh~~~g~s~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~ 184 (527)
|||+.|.+...+.++++|||++||+|++|+++++|+||||+++.+|+++|.++++++.+|+|.|+++||||+++|||+|+
T Consensus 78 Gh~~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~ 157 (495)
T 3fw9_A 78 GHSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGM 157 (495)
T ss_dssp CCCTTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCT
T ss_pred CcCCCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCcc
Confidence 99999887655556899999999999999999999999999999999999999666889999999999999999999999
Q ss_pred ccccccccccceeEEEEEeeCCeEeecccCChhhhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEecch-hhHHHH
Q 009727 185 LLRKYGLAADQVVDAYLIDVNGRILDRRAMGEDLFWAIRGGGGSSFGIILSWKIKLVRVPETVTSFTVLKTLE-QGALEL 263 (527)
Q Consensus 185 ~~~~~G~~~D~v~~~~vV~~~G~i~~~~~~~~dL~~a~rG~~~g~~GIVt~~~lkl~p~~~~~~~~~~~~~~~-~~~~~~ 263 (527)
++++||+.+|+|+++|||++||++++++.+++||||++|||++|+|||||+++||++|.|+.+..|.+.+... +++.++
T Consensus 158 ~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~ 237 (495)
T 3fw9_A 158 MSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSL 237 (495)
T ss_dssp THHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHH
T ss_pred cccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHH
Confidence 9999999999999999999999999855578999999999658999999999999999999888887777653 678899
Q ss_pred HHHHHHhcccCCCCceEEEEEEeecCCCCcceEEEEEEEEecCccchhhhhcccCCcCCCCcccceecchHHHHHhhhcC
Q 009727 264 VHRWQYIAPKFHEDLFIRILIVHVGNGDQKTIHANFNSLFLGKIDRLIPLMNQSFPELGLRAEDCTEMSWVESTVYFAGF 343 (527)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (527)
+.+|++++.++|+++++.+.... . .+...+.+.++|+|+++++++.+.+.|+++++....+.+++|.+.+.++...
T Consensus 238 l~~~~~~~~~~~~~l~~~~~~~~--~--~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 313 (495)
T 3fw9_A 238 LHKWQFVAEELEEDFTLSVLGGA--D--EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAGL 313 (495)
T ss_dssp HHHHHHHHHHSCTTEEEEEEEEE--E--TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHTTC
T ss_pred HHHHHHHHhcCChhHeEEEEEcC--C--CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHHhcc
Confidence 99999999999999998776431 1 2345678889999999999888888788888767789999999988877643
Q ss_pred CCCCchhhhhccccc-cccccccccccccCCCCHhHHHHHHHHHhcCCceEEEEEecCcccccCCCCCCCCcccCCceEE
Q 009727 344 SKGSPLEMLLDKKQL-FKSMFKAKSDFVTEPIPFHALEGIWGRLLEEEMAIMIMDPFGGKMNEILESEVPFPHRNGVLYN 422 (527)
Q Consensus 344 ~~g~~~~~~l~~~~~-~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gga~~~~~~~~taf~~R~~~~~~ 422 (527)
+. ++.++++... +..+||.||+|+.++++++.++.+++.+.+.+...+.++++||++++++.++|||+||++.+|.
T Consensus 314 ~~---~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~TAf~hR~~~~~~ 390 (495)
T 3fw9_A 314 ET---VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPHRSGTRLM 390 (495)
T ss_dssp SC---GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTSSCCCCTTCCEE
T ss_pred cc---hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCCCccccCccceE
Confidence 21 2334444322 2357889999999999999999999998876667889999999999999999999999866899
Q ss_pred EEEEEEeCCCcccchhhHHHHHHHHHHhhcccccCCCCccccCCCCcccCCccc-----CCcchHHhhhhHhhhhcccHH
Q 009727 423 IQYMVKWEANGVMASNRHIHWIRSLYKYMAPYVSRSPRAAYINYRDLDLGTNKL-----QNASYSEAAAWGIKYFKSNFK 497 (527)
Q Consensus 423 ~~~~~~W~~~~~d~~~~~~~~~~~~~~~l~p~~~~~~~g~Y~Ny~d~~l~~~~~-----~~~~~~~~~~w~~~yyg~n~~ 497 (527)
+++.+.|.++..+..++..+|++++++.|.|+.+..++++|+||+|.+++.+.. .|+++++.+.|++.|||+||+
T Consensus 391 ~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~n~~ 470 (495)
T 3fw9_A 391 VEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNYE 470 (495)
T ss_dssp EEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGGGHH
T ss_pred EEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhHhHHH
Confidence 999999976422223678899999999999997766678999999998863221 135566677899999999999
Q ss_pred HHHHHHhccCCCCCcccCCCCCCc
Q 009727 498 RLALVKSKVDPGNFFRNEQSIPPF 521 (527)
Q Consensus 498 RL~~IK~kyDP~~vF~~~~~i~~~ 521 (527)
||++||++|||+|||+++|||||.
T Consensus 471 RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 471 RLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp HHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred HHHHHHHhhCcHhhCCCCCCCCCC
Confidence 999999999999999999999985
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=3.3e-81 Score=675.05 Aligned_cols=488 Identities=46% Similarity=0.911 Sum_probs=411.3
Q ss_pred CCchhhHHHhhhhccCCCCCCcceEecCCCcchhHHHhhcccCcCccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcE
Q 009727 20 SSIQEDFMHCMSTQFGEYTRSFEIIFNQDSSLYSYILQSSVQNPRYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQI 99 (527)
Q Consensus 20 ~~~~~~~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~ 99 (527)
++..++|.+||.+... +..|++|+|+.|.+.+.++.+|.||+.....+|.+||+|+|++||+++|++|+++++||
T Consensus 5 ~~~~~~f~~~L~~~~~-----~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~ 79 (500)
T 3tsh_A 5 PAAKEDFLGCLVKEIP-----PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRI 79 (500)
T ss_dssp ----CHHHHHHHHHSC-----GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEE
T ss_pred cccHHHHHHHHHhhCC-----CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcE
Confidence 4567899999998764 46789999999999999999999999988899999999999999999999999999999
Q ss_pred EEEcCCCCCCCCccc--cCCCeEEEEcCCCCCeEEcCCCCEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCcccccccc
Q 009727 100 RVRSGGHDYEGLSYL--CRTPFIIIDLINMRSIEINLEDETAWVQSGANLGELYYALAMKSLVHGFPAGLCPTVGIGGHL 177 (527)
Q Consensus 100 ~v~ggGh~~~g~s~~--~~~~gvvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~ 177 (527)
+||||||++.|.+.. ..+++++|||++||+|++|++.++++||||++|+||+++|.++|+.+.+++|.|++|||||++
T Consensus 80 ~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~ 159 (500)
T 3tsh_A 80 RVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNF 159 (500)
T ss_dssp EEESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHH
T ss_pred EEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCcc
Confidence 999999999887643 224689999999999999999999999999999999999999998888999999999999999
Q ss_pred ccCcCCCccccccccccceeEEEEEeeCCeEeecccCChhhhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEecch
Q 009727 178 GGGGFGTLLRKYGLAADQVVDAYLIDVNGRILDRRAMGEDLFWAIRGGGGSSFGIILSWKIKLVRVPETVTSFTVLKTLE 257 (527)
Q Consensus 178 ~ggg~g~~~~~~G~~~D~v~~~~vV~~~G~i~~~~~~~~dL~~a~rG~~~g~~GIVt~~~lkl~p~~~~~~~~~~~~~~~ 257 (527)
+|||+|..+++||+++|+|+++|||++||++++.+.+++||||++|||++|+|||||+++||++|.|+.+..+...+...
T Consensus 160 ~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~ 239 (500)
T 3tsh_A 160 AGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVS 239 (500)
T ss_dssp HTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETT
T ss_pred ccccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcH
Confidence 99999999999999999999999999999999866778999999998878999999999999999999887777777666
Q ss_pred hhHHHHHHHHHHhcccCCCCceEEEEEEeecCCCCcceEEEEEEEEecCccchhhhhcccCCcCCCCcccceecchHHHH
Q 009727 258 QGALELVHRWQYIAPKFHEDLFIRILIVHVGNGDQKTIHANFNSLFLGKIDRLIPLMNQSFPELGLRAEDCTEMSWVEST 337 (527)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 337 (527)
+.+.+++.+|+.+.+++|+++...+... + +...+..+|.|+.+++.+.+.+.++.++.....+..++|.+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~---~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 311 (500)
T 3tsh_A 240 EGAVDIINKWQVVAPQLPADLMIRIIAQ-----G---PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSI 311 (500)
T ss_dssp TTHHHHHHHHHHHGGGSCTTEEEEEEES-----S---SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHH
T ss_pred HHHHHHHHHHHHhhhccChhhEEEEEec-----C---CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccc
Confidence 7788899999999999999987765431 1 2356778999998888787777777777767777888898876
Q ss_pred HhhhcCCCCCchhhhhccccccccccccccccccCCCCHhHHHHHHHHHhcCC-ceEEEEEecCcccccCCCCCCCCccc
Q 009727 338 VYFAGFSKGSPLEMLLDKKQLFKSMFKAKSDFVTEPIPFHALEGIWGRLLEEE-MAIMIMDPFGGKMNEILESEVPFPHR 416 (527)
Q Consensus 338 ~~~~~~~~g~~~~~~l~~~~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~gga~~~~~~~~taf~~R 416 (527)
.+..........+..+++......+.+.++.++.++++++.++.+++.+...+ ...+.++++||++.+++.++++|+||
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~~~ata~~~R 391 (500)
T 3tsh_A 312 PFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPHR 391 (500)
T ss_dssp HHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSCTTSSSCCCC
T ss_pred hhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCCCccCcCccc
Confidence 55443222222223334333334455667788888888888888887765544 45678899999999999999999999
Q ss_pred CCceEEEEEEEEeCCCcccchhhHHHHHHHHHHhhcccccCCCCccccCCCCcccCCccc--CCcchHHhhhhHhhhhcc
Q 009727 417 NGVLYNIQYMVKWEANGVMASNRHIHWIRSLYKYMAPYVSRSPRAAYINYRDLDLGTNKL--QNASYSEAAAWGIKYFKS 494 (527)
Q Consensus 417 ~~~~~~~~~~~~W~~~~~d~~~~~~~~~~~~~~~l~p~~~~~~~g~Y~Ny~d~~l~~~~~--~~~~~~~~~~w~~~yyg~ 494 (527)
++.++.+++...|.+++++ +...+|++++++.+.|+..+.+.++|+||+|.+++.+.. ....+...++|++.|||+
T Consensus 392 ~~~l~~i~~~~~w~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~ 469 (500)
T 3tsh_A 392 KGVLFNIQYVNYWFAPGAA--AAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKG 469 (500)
T ss_dssp TTCCEEEEEEEEECSTTCC--HHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGG
T ss_pred CCcEEEEEEEEecCCcchh--HHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhH
Confidence 9778899999999987765 678899999999999998777779999999998865322 122445567899999999
Q ss_pred cHHHHHHHHhccCCCCCcccCCCCCCcc
Q 009727 495 NFKRLALVKSKVDPGNFFRNEQSIPPFG 522 (527)
Q Consensus 495 n~~RL~~IK~kyDP~~vF~~~~~i~~~~ 522 (527)
||+||++||+||||+|||+++|||||..
T Consensus 470 Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~ 497 (500)
T 3tsh_A 470 NFERLAITKGKVDPTDYFRNEQSIPPLI 497 (500)
T ss_dssp GHHHHHHHHHHHCTTCCSCCTTSCCCCC
T ss_pred HHHHHHHHHHHhCcccccCCCCCCCCCC
Confidence 9999999999999999999999999975
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=1.2e-75 Score=625.29 Aligned_cols=455 Identities=25% Similarity=0.417 Sum_probs=373.1
Q ss_pred hHHHhhhhccCCCCCCcceEecCCCcchhHHHhhcccCcCccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcC
Q 009727 25 DFMHCMSTQFGEYTRSFEIIFNQDSSLYSYILQSSVQNPRYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSG 104 (527)
Q Consensus 25 ~~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~gg 104 (527)
+|.+||.+.. ..|++|+|+.|+..+. +|+......|.+|++|+|++||+++|++|+++++|+.+|||
T Consensus 2 ~l~~cl~~~~-------~~v~~p~~~~y~~~~~------~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~gg 68 (473)
T 3rja_A 2 AIEACLSAAG-------VPIDIPGTADYERDVE------PFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSG 68 (473)
T ss_dssp HHHHHHHHTT-------CCBCCTTSHHHHHHTC------CSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESS
T ss_pred hHHHHHHhCC-------CcEECCCCCchHHHHH------HhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 5788999963 3589999999998754 56666668999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCeEEEEcCCCCCeE-EcCCCCEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCccccccccccCcCC
Q 009727 105 GHDYEGLSYLCRTPFIIIDLINMRSIE-INLEDETAWVQSGANLGELYYALAMKSLVHGFPAGLCPTVGIGGHLGGGGFG 183 (527)
Q Consensus 105 Gh~~~g~s~~~~~~gvvIdl~~~~~i~-~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g 183 (527)
|||+.+.+.....++++|||++||+|. +|++.++++||+|+++++|+++|.++|. +.+|.|.|+++||||+++|||+|
T Consensus 69 Gh~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G~-~~~p~G~~~~vgvgG~~~ggg~G 147 (473)
T 3rja_A 69 GHSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKYG-RAISHGTCPGVGISGHFAHGGFG 147 (473)
T ss_dssp CCCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHHS-EECCCCSCTTCBHHHHHHTCCCC
T ss_pred CCCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcCC-EEeccCCCCCcEeeeeccCCCCC
Confidence 999987654444468999999999996 9999999999999999999999999983 67889999999999999999999
Q ss_pred CccccccccccceeEEEEEeeCCeEee-cccCChhhhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEecch--hhH
Q 009727 184 TLLRKYGLAADQVVDAYLIDVNGRILD-RRAMGEDLFWAIRGGGGSSFGIILSWKIKLVRVPETVTSFTVLKTLE--QGA 260 (527)
Q Consensus 184 ~~~~~~G~~~D~v~~~~vV~~~G~i~~-~~~~~~dL~~a~rG~~~g~~GIVt~~~lkl~p~~~~~~~~~~~~~~~--~~~ 260 (527)
+.+++||+++|+|+++|||++||++++ +..+++||||++||| +|+|||||+++||++|.|+....+.+.+... +++
T Consensus 148 ~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~-~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~ 226 (473)
T 3rja_A 148 FSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGA-GSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSA 226 (473)
T ss_dssp TTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHH-GGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHH
T ss_pred cccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCC-CCceEEEEEEEEEEEeCCCceEEEEEEecCccHHHH
Confidence 999999999999999999999999998 556789999999999 7999999999999999998877777777653 357
Q ss_pred HHHHHHHHHhcc-cCCCCceEEEEEEeecCCCCcceEEEEEEEEecCccchhhhhcccCCcCC-CCcccce-ecchHHHH
Q 009727 261 LELVHRWQYIAP-KFHEDLFIRILIVHVGNGDQKTIHANFNSLFLGKIDRLIPLMNQSFPELG-LRAEDCT-EMSWVEST 337 (527)
Q Consensus 261 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~l~~~~-~~~~~~~-~~~~~~~~ 337 (527)
.+++++|+++.. ++|+++++.+.+. + .. .+.+.++|+|+++++++++++++...+ +....+. +++|.+.+
T Consensus 227 ~~~~~~~~~~~~~~~p~~l~~~~~~~--~--~~---~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~~~ 299 (473)
T 3rja_A 227 LKGIEAVEDYARWVAPREVNFRIGDY--G--AG---NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESV 299 (473)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEEES--S--SS---CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHHHH
T ss_pred HHHHHHHHHHhhhCCChhHEEEEEEc--C--CC---cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHHHH
Confidence 789999999887 8999998877654 1 11 167789999999999888887543333 3456677 89999987
Q ss_pred HhhhcCCCCCchhhhhccccccccccccccccccCCCCHhHHHHHHHHHhcC-C-----ceEEEEEecCc---ccccCCC
Q 009727 338 VYFAGFSKGSPLEMLLDKKQLFKSMFKAKSDFVTEPIPFHALEGIWGRLLEE-E-----MAIMIMDPFGG---KMNEILE 408 (527)
Q Consensus 338 ~~~~~~~~g~~~~~~l~~~~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~-~-----~~~~~~~~~gg---a~~~~~~ 408 (527)
.++.... +.+..... ....++.++.++. +++++.++.+++.+.+. + .+.+.+++||| ++++++.
T Consensus 300 ~~~~~~~---~~~~~~~~---~~~~~~~ks~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v~~ 372 (473)
T 3rja_A 300 LSYSNFD---HVDFITPQ---PVENFYAKSLTLK-SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKVTN 372 (473)
T ss_dssp HHTSSSS---CCCCSSCC---CCBEEEEEEEEES-CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGSCT
T ss_pred HhhhcCC---CcccccCC---CCCcceEeccccC-CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCCCC
Confidence 7654311 11111110 0245667888864 69999999999888542 1 12577899997 7888999
Q ss_pred CCCCCcccCCceEEEEEEEEeCC-CcccchhhHHHHHHHHHHhhcccccCCCCccccCCCCcccCCcccCCcchHHhhhh
Q 009727 409 SEVPFPHRNGVLYNIQYMVKWEA-NGVMASNRHIHWIRSLYKYMAPYVSRSPRAAYINYRDLDLGTNKLQNASYSEAAAW 487 (527)
Q Consensus 409 ~~taf~~R~~~~~~~~~~~~W~~-~~~d~~~~~~~~~~~~~~~l~p~~~~~~~g~Y~Ny~d~~l~~~~~~~~~~~~~~~w 487 (527)
++|||+||+ ..|.+++.+.|.+ +..+ +...+|++++++.+.+.....+.++|+||+|.+++. .+|
T Consensus 373 ~~TAf~hR~-~~~~~~~~~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~~-----------~~~ 438 (473)
T 3rja_A 373 AETAYPHRD-KLWLIQFYDRYDNNQTYP--ETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMDR-----------DYA 438 (473)
T ss_dssp TTSSCCCTT-CSEEEEEEEEECTTSCCC--TTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSCH-----------HHH
T ss_pred CCCccccCC-ccEEEEEEEEeCCCCccc--hHHHHHHHHHHHHHHhhCCCCCCceEecCCCccccc-----------hhH
Confidence 999999999 7899999999964 3322 456788888777775544323458999999988641 369
Q ss_pred HhhhhcccHHHHHHHHhccCCCCCcccCCCCCCcc
Q 009727 488 GIKYFKSNFKRLALVKSKVDPGNFFRNEQSIPPFG 522 (527)
Q Consensus 488 ~~~yyg~n~~RL~~IK~kyDP~~vF~~~~~i~~~~ 522 (527)
++.|||+||+||++||+||||+|+|+++|||+|.|
T Consensus 439 ~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~~ 473 (473)
T 3rja_A 439 TKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPVK 473 (473)
T ss_dssp HHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred HHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCCC
Confidence 99999999999999999999999999999999975
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=2.8e-72 Score=602.00 Aligned_cols=451 Identities=21% Similarity=0.330 Sum_probs=354.8
Q ss_pred CcceEecCCCcchhHHHhhcccCcCccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccccCCCe
Q 009727 40 SFEIIFNQDSSLYSYILQSSVQNPRYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLCRTPF 119 (527)
Q Consensus 40 ~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~g 119 (527)
+.+.|++|+|+.|++++. .+|.|| ...|.+|++|+|++||+++|++|+++++||+|||||||+.+.+... +++
T Consensus 8 ~~~~~~~p~~~~y~~~~~--~~n~~~----~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~-~~g 80 (501)
T 3pop_A 8 VPPFTVGREDPRYIELSH--SDNHRF----VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTP-RRD 80 (501)
T ss_dssp -CCEEEETTSTTHHHHTC--CSCTTS----CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSS-CCS
T ss_pred CCCceECCCCcchHHHHH--HHhhcc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccC-CCE
Confidence 467799999999999864 345554 5899999999999999999999999999999999999999876432 358
Q ss_pred EEEEcCCCCCeEEcCCCCEEEEcCCCCHHHHHHHHHH-cCCcccccCCCCCccccccccccCcCCCccccccccccceeE
Q 009727 120 IIIDLINMRSIEINLEDETAWVQSGANLGELYYALAM-KSLVHGFPAGLCPTVGIGGHLGGGGFGTLLRKYGLAADQVVD 198 (527)
Q Consensus 120 vvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~D~v~~ 198 (527)
++|||++||+|++|++.++|+||+|+++.+|+++|.+ +| +.+|.|.|+++||||+++|||+|+++++||+++|+|++
T Consensus 81 vvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~ 158 (501)
T 3pop_A 81 LVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHA 158 (501)
T ss_dssp EEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEE
T ss_pred EEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhEEE
Confidence 9999999999999999999999999999999999974 57 57889999999999999999999999999999999999
Q ss_pred EEEEe--eCCe--Eeec----ccCChhhhhhhhccCCCceEEEEEEEEEE----------EecC-ceEEEEEEEecch--
Q 009727 199 AYLID--VNGR--ILDR----RAMGEDLFWAIRGGGGSSFGIILSWKIKL----------VRVP-ETVTSFTVLKTLE-- 257 (527)
Q Consensus 199 ~~vV~--~~G~--i~~~----~~~~~dL~~a~rG~~~g~~GIVt~~~lkl----------~p~~-~~~~~~~~~~~~~-- 257 (527)
+|||+ +||+ +++. +.+|+|||||+||||+|+|||||+++||+ +|.+ ..++.+.+.|...
T Consensus 159 ~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~ 238 (501)
T 3pop_A 159 VEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMI 238 (501)
T ss_dssp EEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGC
T ss_pred EEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhc
Confidence 99999 8899 4442 35689999999998679999999999999 6654 4555556665532
Q ss_pred --hhHHHHHHHHHHhcc--cCCCCc--eEEEEEEeecCCCCcceEEEEEEEEecCccchhhhhcccCCc------CCCCc
Q 009727 258 --QGALELVHRWQYIAP--KFHEDL--FIRILIVHVGNGDQKTIHANFNSLFLGKIDRLIPLMNQSFPE------LGLRA 325 (527)
Q Consensus 258 --~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~l~~------~~~~~ 325 (527)
+.+.+++..|+++.. ..|++. .+...+...+. .. ..+.+..+|.|+.+++++++++++.. +.+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p~~ 315 (501)
T 3pop_A 239 DETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHV-SS--GVLQLMVQQDADVDPEGEILARFVASLTEGTGVVGIP 315 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECG-GG--CEEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCCEE
T ss_pred CHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCC-CC--CeEEEEEEEeCChHHHHHHHHHHHHhhhhccCCCccc
Confidence 234577888877653 345543 22222222211 11 12566678899988877777765432 22333
Q ss_pred ccceecchHHHHHhhhcCCCCCchhhhhccccccccccccccccccCCCCHhHHHHHHHHHhcC---CceEEEEEecCcc
Q 009727 326 EDCTEMSWVESTVYFAGFSKGSPLEMLLDKKQLFKSMFKAKSDFVTEPIPFHALEGIWGRLLEE---EMAIMIMDPFGGK 402 (527)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~gga 402 (527)
. +.+++|.+...+... +.+.+ . ...+++.|+.|+.++++++.++.+++.+.+. +.+.+.++++||+
T Consensus 316 ~-~~~~~~~~~~~~~~~-~~~~~---~------~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~GGa 384 (501)
T 3pop_A 316 R-GGVMSWLTGTRYMSQ-ADCGD---V------MGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYGGE 384 (501)
T ss_dssp E-EEEEEHHHHHHHTCB-CSCGG---G------TTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEECCGG
T ss_pred e-eEEeCHHHHHhhhcC-CCCCc---c------cccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCcc
Confidence 3 788999987665421 11100 0 1235678899998889999999999988653 2467889999999
Q ss_pred cccCCCCCCCCcccCCceEEEEEEEEeCCCcccchhhHHHHHHHHHHhhcccccC------CCCccccCCCCcccCCccc
Q 009727 403 MNEILESEVPFPHRNGVLYNIQYMVKWEANGVMASNRHIHWIRSLYKYMAPYVSR------SPRAAYINYRDLDLGTNKL 476 (527)
Q Consensus 403 ~~~~~~~~taf~~R~~~~~~~~~~~~W~~~~~d~~~~~~~~~~~~~~~l~p~~~~------~~~g~Y~Ny~d~~l~~~~~ 476 (527)
+++++.++|||+||+ ..|++++...|.+++.+ +++.+|++++++.+.++..+ .+.++|+||+|.+++.+..
T Consensus 385 v~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~~~--~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~~~~ 461 (501)
T 3pop_A 385 INRRGPSDAAVPQRD-SVVKSSWFSAWQDAELD--ELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDPAR 461 (501)
T ss_dssp GGGSCTTTSSCCCCS-CSEEEEEEEEESCGGGH--HHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGCTTT
T ss_pred cccCCCCCCCccCcC-ccEEEEEEEEeCCcchH--HHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCcccccccc
Confidence 999999999999999 78999999999876544 67899999999999776432 2458999999998754211
Q ss_pred CCcchHHhhhhHhhhhcccHHHHHHHHhccCCCCCcccCCCCCC
Q 009727 477 QNASYSEAAAWGIKYFKSNFKRLALVKSKVDPGNFFRNEQSIPP 520 (527)
Q Consensus 477 ~~~~~~~~~~w~~~yyg~n~~RL~~IK~kyDP~~vF~~~~~i~~ 520 (527)
|++ ...|++.|||+||+||++||+||||+|||+++|||+|
T Consensus 462 -~~~---~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 462 -NRS---GEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp -CCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred -ccc---cchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 121 2359999999999999999999999999999999997
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=1.5e-68 Score=577.23 Aligned_cols=456 Identities=23% Similarity=0.395 Sum_probs=346.2
Q ss_pred HHhhhhccCCCCCCcceEecCCCcchhHHHhhcccCcCccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q 009727 27 MHCMSTQFGEYTRSFEIIFNQDSSLYSYILQSSVQNPRYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGH 106 (527)
Q Consensus 27 ~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh 106 (527)
.+||... ...|++|+|+.|+.++ ...+|.||. ..|.+||+|+|++||+++|++|+++++||.||||||
T Consensus 24 ~~~l~~~-------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh 91 (523)
T 2wdx_A 24 ERCLPPA-------GPVKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGH 91 (523)
T ss_dssp --CCCCC-------CCEEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred hhhcccC-------CCeEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCC
Confidence 4787764 4578999999999986 235577774 789999999999999999999999999999999999
Q ss_pred CCCCCccccCCCeEEEEcCCCCCeEEcCCCCEEEEcCCCCHHHHHHHHHH-cCCcccccCCCCCccccccccccCcCCCc
Q 009727 107 DYEGLSYLCRTPFIIIDLINMRSIEINLEDETAWVQSGANLGELYYALAM-KSLVHGFPAGLCPTVGIGGHLGGGGFGTL 185 (527)
Q Consensus 107 ~~~g~s~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~~~~~~g~~~~vgigG~~~ggg~g~~ 185 (527)
|+.+.+... .++++|||++||+|++|++..+|+||+|++|.+|+++|.+ +|+ .++.|.|++|||||+++|||+|++
T Consensus 92 ~~~g~~~~~-~~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl--~~~~G~~~~vgvgG~~~gGg~g~~ 168 (523)
T 2wdx_A 92 CFEDFVDNP-DVKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWNV--TIPGGVCGGVGVGGHICGGGYGPL 168 (523)
T ss_dssp CSSSSSSST-TCCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHSC--CCCCCCCTTCBHHHHHHHTCCCTT
T ss_pred CCCCCccCC-CCeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcCe--EEccCCCCCCeeCccccCCCCCcc
Confidence 999875432 3589999999999999999999999999999999999984 884 678899999999999999999999
Q ss_pred cccccccccceeEEEEEeeC--CeEee---ccc-CChh--hhhhhhccCCCceEEEEEEEEEE-----------EecCc-
Q 009727 186 LRKYGLAADQVVDAYLIDVN--GRILD---RRA-MGED--LFWAIRGGGGSSFGIILSWKIKL-----------VRVPE- 245 (527)
Q Consensus 186 ~~~~G~~~D~v~~~~vV~~~--G~i~~---~~~-~~~d--L~~a~rG~~~g~~GIVt~~~lkl-----------~p~~~- 245 (527)
+++||+++|+|+++|||++| |++++ +.. +++| ||||+|||++|+|||||+++||+ +|.|+
T Consensus 169 s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~ 248 (523)
T 2wdx_A 169 SRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPA 248 (523)
T ss_dssp HHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCS
T ss_pred cccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcc
Confidence 99999999999999999965 99753 221 4455 99999987679999999999999 99876
Q ss_pred eEEEEEEEecch----hhHHHHHHHHHHhccc--CCCCc--eEEEEEEeecC-CCCcceEEEEEEEEecCccchhhhhcc
Q 009727 246 TVTSFTVLKTLE----QGALELVHRWQYIAPK--FHEDL--FIRILIVHVGN-GDQKTIHANFNSLFLGKIDRLIPLMNQ 316 (527)
Q Consensus 246 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~G~~~~~~~~l~~ 316 (527)
.+..+.+.|... +...++++.|+++... .|++. .+...+..... .+...+.+.+..+|.|+.++..+++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~l~~ 328 (523)
T 2wdx_A 249 TLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDARRLLDA 328 (523)
T ss_dssp EEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECCCTTCTTCSEEEEEEEETTSTTHHHHHHH
T ss_pred cEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccCCCCCcceeEEEEEEEeCCHHHHHHHHHH
Confidence 355566666532 3345788888876543 56652 22222222211 111123466778899988777666665
Q ss_pred cCCc----CC-CCcccceecchHHHHHhhhcCCCCCchhhhhccccccccccccccccccCCCCHhHHHHHHHHHhcC--
Q 009727 317 SFPE----LG-LRAEDCTEMSWVESTVYFAGFSKGSPLEMLLDKKQLFKSMFKAKSDFVTEPIPFHALEGIWGRLLEE-- 389 (527)
Q Consensus 317 ~l~~----~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~-- 389 (527)
++.. ++ +....+..++|.+...... . . ..+++.++.|+.+.++.+.+..+++.+...
T Consensus 329 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~---------~---~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 392 (523)
T 2wdx_A 329 HIEAVIDGVPPAEVPEPIEQRWLASTPGRG----G---------R---GPASKTKAGYLRKRLTDRQIQAVYENMTHMDG 392 (523)
T ss_dssp HHHHHHTTCTTCBCCCCEEEETTSSCCCCC----S---------S---CCEEEEEEEEESSCCCHHHHHHHHHHHTCCTT
T ss_pred HHHHHHhhcCCCccccceeccHHHHHHhhc----C---------C---CCceeeecccccCCCCHHHHHHHHHHHHhcCC
Confidence 4321 23 2334455667765311110 0 0 113455677777678888899999888653
Q ss_pred -CceEEEEEecCcccccCCCCCCCCcccCCceEEEEEEEEeCCCcccchhhHHHHHHHHHHhhcccccC------CCCcc
Q 009727 390 -EMAIMIMDPFGGKMNEILESEVPFPHRNGVLYNIQYMVKWEANGVMASNRHIHWIRSLYKYMAPYVSR------SPRAA 462 (527)
Q Consensus 390 -~~~~~~~~~~gga~~~~~~~~taf~~R~~~~~~~~~~~~W~~~~~d~~~~~~~~~~~~~~~l~p~~~~------~~~g~ 462 (527)
+.+.+.++.+||++++++.++++|+||+ .++++++...|.+++++ +...+|++++++.+.+...+ ...++
T Consensus 393 ~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g~ 469 (523)
T 2wdx_A 393 IDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANPGNE--AKHLTWVRKLYADVYAETGGVPVPNDVSDGA 469 (523)
T ss_dssp CSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSGGGH--HHHHHHHHHHHHHHTGGGTTSCCSCSSBCCC
T ss_pred CCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCCccH--HHHHHHHHHHHHHHHhhhcCCCccCCCCCcc
Confidence 2456778899999999999999999999 78999999999876654 67899999999988732211 13479
Q ss_pred ccCCCCcccCCcccCCcchHHhhhhHhhhhcccHHHHHHHHhccCCCCCcccCCCCCC
Q 009727 463 YINYRDLDLGTNKLQNASYSEAAAWGIKYFKSNFKRLALVKSKVDPGNFFRNEQSIPP 520 (527)
Q Consensus 463 Y~Ny~d~~l~~~~~~~~~~~~~~~w~~~yyg~n~~RL~~IK~kyDP~~vF~~~~~i~~ 520 (527)
|+||+|.+++.+. -|++ ...|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 470 Y~Ny~d~~~~~~~-~~~s---~~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 470 YINYPDSDLADPG-LNTS---GVPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp CTTSCCGGGGCTT-TCCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred eecCCcccccccc-cccc---hhHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 9999999864210 0111 0138999999999999999999999999999999987
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=5.9e-68 Score=572.77 Aligned_cols=462 Identities=24% Similarity=0.401 Sum_probs=343.4
Q ss_pred CchhhHHHhhhhccCCCCCCcceEecCCCcchhHHHhhcccCcCccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcEE
Q 009727 21 SIQEDFMHCMSTQFGEYTRSFEIIFNQDSSLYSYILQSSVQNPRYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQIR 100 (527)
Q Consensus 21 ~~~~~~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~ 100 (527)
.--.+...|+... ...|++|+|+.|++++ ...+|.||. ..|.+||+|+|++||+++|++|+++++|+.
T Consensus 16 ~~~~~~~~~~~~~-------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 83 (521)
T 2ipi_A 16 IWEFDGGACGART-------ALVKVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRIA 83 (521)
T ss_dssp --------------------CCCEEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEE
T ss_pred hhhccccccccCC-------CCeEECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeEE
Confidence 3344666788775 3568999999999986 234566774 789999999999999999999999999999
Q ss_pred EEcCCCCCCCCccccCCCeEEEEcCCCCCeEEcCCCCEEEEcCCCCHHHHHHHHH-HcCCcccccCCCCCcccccccccc
Q 009727 101 VRSGGHDYEGLSYLCRTPFIIIDLINMRSIEINLEDETAWVQSGANLGELYYALA-MKSLVHGFPAGLCPTVGIGGHLGG 179 (527)
Q Consensus 101 v~ggGh~~~g~s~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~-~~g~~~~~~~g~~~~vgigG~~~g 179 (527)
|||||||+.+.+.. ..++++|||++||+|++|++..+|+||+|++|.+|+++|. ++| +.+|+|.|+++||||+++|
T Consensus 84 vrggGh~~~g~~~~-~~~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~g 160 (521)
T 2ipi_A 84 VRSGGHCFEGFVDD-PAVRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLG 160 (521)
T ss_dssp EESSCCCTTCGGGC-TTCCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTT
T ss_pred EECCCcCCCCCccc-CCCeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccC
Confidence 99999999987542 2358999999999999999999999999999999999997 677 5788999999999999999
Q ss_pred CcCCCccccccccccceeEEEEEeeC--CeEee---ccc-CCh--hhhhhhhccCCCceEEEEEEEEEE-----------
Q 009727 180 GGFGTLLRKYGLAADQVVDAYLIDVN--GRILD---RRA-MGE--DLFWAIRGGGGSSFGIILSWKIKL----------- 240 (527)
Q Consensus 180 gg~g~~~~~~G~~~D~v~~~~vV~~~--G~i~~---~~~-~~~--dL~~a~rG~~~g~~GIVt~~~lkl----------- 240 (527)
||+|++++.||+++|+|+++|||++| |++++ ... +++ |||||+||||+|+|||||+++||+
T Consensus 161 Gg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~ 240 (521)
T 2ipi_A 161 GGYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQL 240 (521)
T ss_dssp TCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGS
T ss_pred CCCCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccc
Confidence 99999999999999999999999987 98743 221 344 599999997679999999999999
Q ss_pred EecCc-eEEEEEEEecc----hhhHHHHHHHHHHhccc--CCCC----ceEEEEEEeecCCCCcceEEEEEEEEecCccc
Q 009727 241 VRVPE-TVTSFTVLKTL----EQGALELVHRWQYIAPK--FHED----LFIRILIVHVGNGDQKTIHANFNSLFLGKIDR 309 (527)
Q Consensus 241 ~p~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 309 (527)
+|.|+ .+..+.+.+.. .+...++++.|+++... .|++ +...+.+ .+. ..+ .+.+..+|.|+.++
T Consensus 241 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~--~~~-~~~--~~~~~~~~~g~~~~ 315 (521)
T 2ipi_A 241 LPKAPTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYL--NSR-AAG--QILLDIQIDGGLDG 315 (521)
T ss_dssp SCBCCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEE--ECT-TSC--EEEEEEEEETTSTT
T ss_pred cCCCCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEe--ccC-CCC--ceEEEEEeccCHHH
Confidence 99875 34445555542 12345788888776543 4554 3333222 221 111 24556678998877
Q ss_pred hhhhhcccCCc----CC-CCcccceecchHHHHHhhhcCCCCCchhhhhccccccccccccccccccCCCCHhHHHHHHH
Q 009727 310 LIPLMNQSFPE----LG-LRAEDCTEMSWVESTVYFAGFSKGSPLEMLLDKKQLFKSMFKAKSDFVTEPIPFHALEGIWG 384 (527)
Q Consensus 310 ~~~~l~~~l~~----~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~s~~~~~~l~~~~~~~~~~ 384 (527)
..+++++++.. ++ +.......++|.+..........+ ..+++.++.++.++++.+.++++++
T Consensus 316 ~~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~s~~~~~~~~~~~i~~~~~ 382 (521)
T 2ipi_A 316 AEALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKFDTGG-------------FDRTKSKGAYLRKPWTAAQAATLYR 382 (521)
T ss_dssp HHHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCCCTT-------------CCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcCCCCC-------------CccceeeccccccCCCHHHHHHHHH
Confidence 76666553321 23 233456667898864432211000 0134456777776788888999999
Q ss_pred HHhcCC--ceEEEEEecCcccccCCCCCCCCcccCCceEEEEEEEEeCCCcccchhhHHHHHHHHHHhhcccccCC----
Q 009727 385 RLLEEE--MAIMIMDPFGGKMNEILESEVPFPHRNGVLYNIQYMVKWEANGVMASNRHIHWIRSLYKYMAPYVSRS---- 458 (527)
Q Consensus 385 ~~~~~~--~~~~~~~~~gga~~~~~~~~taf~~R~~~~~~~~~~~~W~~~~~d~~~~~~~~~~~~~~~l~p~~~~~---- 458 (527)
.+.+.+ .+.+.++++||++++++.++++|+||+ ..+.+++...|.++.++ +...+|++++++.+.+...+.
T Consensus 383 ~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~~~~~~~g~p~~~ 459 (521)
T 2ipi_A 383 HLSADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDPAHD--DANLAWIREIYREIFATTGGVPVPD 459 (521)
T ss_dssp HHHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCGGGH--HHHHHHHHHHHHHHTTTTTSSCCSS
T ss_pred HHHhCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCCCch--HHHHHHHHHHHHHHHhhhcCCCccc
Confidence 887643 467888999999999999999999999 78999999999876644 677999999999987432211
Q ss_pred --CCccccCCCCcccCCcccCCcchHHhhhhHhhhhcccHHHHHHHHhccCCCCCcccCCCCCCcc
Q 009727 459 --PRAAYINYRDLDLGTNKLQNASYSEAAAWGIKYFKSNFKRLALVKSKVDPGNFFRNEQSIPPFG 522 (527)
Q Consensus 459 --~~g~Y~Ny~d~~l~~~~~~~~~~~~~~~w~~~yyg~n~~RL~~IK~kyDP~~vF~~~~~i~~~~ 522 (527)
..++|+||+|.+++.+. -+++ ...|++.|||+||+||++||+||||+|||+++|+|+|++
T Consensus 460 ~~~~g~Y~Ny~d~~~~~~~-~~~~---~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~~ 521 (521)
T 2ipi_A 460 DRTEGTFINYPDVDLVDER-WNTS---GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPPG 521 (521)
T ss_dssp SSBCCCCTTSCCGGGGCTT-TSCC---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC-
T ss_pred CCCCceEeCCCCccccccc-cccc---hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCCC
Confidence 34799999999864210 0111 114999999999999999999999999999999999963
No 8
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=2.3e-67 Score=566.33 Aligned_cols=458 Identities=22% Similarity=0.387 Sum_probs=355.3
Q ss_pred CchhhHHHhhhhccCCCCCCcceEecCCCcchhHHHhhcccCcCccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcEE
Q 009727 21 SIQEDFMHCMSTQFGEYTRSFEIIFNQDSSLYSYILQSSVQNPRYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQIR 100 (527)
Q Consensus 21 ~~~~~~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~ 100 (527)
...+.|..|+... ...++.|+++.|+... .+|+......|.+|++|+|++||+++|++|+++++|+.
T Consensus 4 ~~~~~l~~~l~~~-------~~~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 70 (503)
T 1zr6_A 4 AEFNSINACLAAA-------DVEFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQIS 70 (503)
T ss_dssp CTTCHHHHHHHHT-------TCEECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHhhCcC-------CceecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEE
Confidence 4456788888863 1257899999998763 25666666899999999999999999999999999999
Q ss_pred EEcCCCCCCCCccccCCCeEEEEcCCCCCeEEcCCCCEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCccccccccccC
Q 009727 101 VRSGGHDYEGLSYLCRTPFIIIDLINMRSIEINLEDETAWVQSGANLGELYYALAMKSLVHGFPAGLCPTVGIGGHLGGG 180 (527)
Q Consensus 101 v~ggGh~~~g~s~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~gg 180 (527)
|||||||+.+.+.....++++|||++||+|++| ++++|+||||+++.+|+++|.+++ ++.+|.|.|+++||||+++||
T Consensus 71 v~ggGh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~gG 148 (503)
T 1zr6_A 71 AKGGGHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLGG 148 (503)
T ss_dssp EESSCCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHHC
T ss_pred EECCCcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcCC
Confidence 999999999765432335899999999999999 888999999999999999997775 367889999999999999999
Q ss_pred cCCCccccccccccceeEEEEEeeCCeEee-cccCChhhhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEecc-hh
Q 009727 181 GFGTLLRKYGLAADQVVDAYLIDVNGRILD-RRAMGEDLFWAIRGGGGSSFGIILSWKIKLVRVPETVTSFTVLKTL-EQ 258 (527)
Q Consensus 181 g~g~~~~~~G~~~D~v~~~~vV~~~G~i~~-~~~~~~dL~~a~rG~~~g~~GIVt~~~lkl~p~~~~~~~~~~~~~~-~~ 258 (527)
|+|++++.||+++|+|+++|||++||++++ +..+++||||++||| +|+|||||+++||++|.|+....+.+.+.. .+
T Consensus 149 g~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~-~g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~ 227 (503)
T 1zr6_A 149 GYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGG-GGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRK 227 (503)
T ss_dssp CCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTC-CSSSCEEEEEEECCEECCSCEEEEEEEECCCHH
T ss_pred CCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhcc-CCCcEEEEEEEEEEEecCceeEEEEEEEeCCHH
Confidence 999999999999999999999999999998 556789999999999 679999999999999999876666666643 34
Q ss_pred hHHHHHHHHHHhccc-CCCCceEEEEEEeecCCCCcceEEEEEEEEecCccchhhhhcccCCcCCC--CcccceecchHH
Q 009727 259 GALELVHRWQYIAPK-FHEDLFIRILIVHVGNGDQKTIHANFNSLFLGKIDRLIPLMNQSFPELGL--RAEDCTEMSWVE 335 (527)
Q Consensus 259 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~ 335 (527)
++.++++.|+++... +|++++..+.+.. ..+.+.++|+|+.+++.+++++++..++. ....+..++|.+
T Consensus 228 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~ 299 (503)
T 1zr6_A 228 QHVAGLKALQDWAQNTMPRELSMRLEINA--------NALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYG 299 (503)
T ss_dssp HHHHHHHHHHHHHHHTCCTTBCCEEEEET--------TEEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHH
T ss_pred HHHHHHHHHHHHHhhcCChhHEEEEEEeC--------CeEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHH
Confidence 566888889887765 8888877665431 13667788999988887777765433333 123455678876
Q ss_pred HHHhhhcCCCCCchhhhhccccccccccccccccccCCCCHhHHHHHHHHHh-cCC-----ceEEEEEecCc---ccccC
Q 009727 336 STVYFAGFSKGSPLEMLLDKKQLFKSMFKAKSDFVTEPIPFHALEGIWGRLL-EEE-----MAIMIMDPFGG---KMNEI 406 (527)
Q Consensus 336 ~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~-~~~-----~~~~~~~~~gg---a~~~~ 406 (527)
....+.. +..... ..+......++.++.++.+ ++.+.++.+++.+. ..+ .+.+.++++|| ++.++
T Consensus 300 ~~~~~~~---~~~~~~--~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~ 373 (503)
T 1zr6_A 300 QINTYLY---GADLNI--TYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAV 373 (503)
T ss_dssp HHTTSCT---TCCSSC--SSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGS
T ss_pred HHHHHcC---CCcccc--cCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCC
Confidence 5432211 000000 0000011245667777777 88888999988887 432 13477899999 89999
Q ss_pred CCCCCCCcccCCceEEEEEEEEe-----CCCcccchhhHHHHHHHHHHhhcccccCCCCccccCCCCcccCCcccCCcch
Q 009727 407 LESEVPFPHRNGVLYNIQYMVKW-----EANGVMASNRHIHWIRSLYKYMAPYVSRSPRAAYINYRDLDLGTNKLQNASY 481 (527)
Q Consensus 407 ~~~~taf~~R~~~~~~~~~~~~W-----~~~~~d~~~~~~~~~~~~~~~l~p~~~~~~~g~Y~Ny~d~~l~~~~~~~~~~ 481 (527)
+.++++|+||+ ..+++++...| .++..+ +...+|++++.+.+.........|+|+||+|.+++
T Consensus 374 ~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~--------- 441 (503)
T 1zr6_A 374 SNDETAYAHRD-QLWLWQFYDSIYDYENNTSPYP--ESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT--------- 441 (503)
T ss_dssp CTTTSSCCCTT-CSEEEEEEEEETTTTTCCTTTT--TSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC---------
T ss_pred CcccCCccccc-ceeEEEEEeeeccccCCCccch--HHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc---------
Confidence 99999999999 67888886776 333222 34567877777666543321123799999998753
Q ss_pred HHhhhhHhhhhcccHHHHHHHHhccCCCCCcccCCCCCCcc
Q 009727 482 SEAAAWGIKYFKSNFKRLALVKSKVDPGNFFRNEQSIPPFG 522 (527)
Q Consensus 482 ~~~~~w~~~yyg~n~~RL~~IK~kyDP~~vF~~~~~i~~~~ 522 (527)
.++|++.|||+||+||++||+||||+|||+++|+|+|..
T Consensus 442 --~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~ 480 (503)
T 1zr6_A 442 --KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIA 480 (503)
T ss_dssp --HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred --cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchh
Confidence 137999999999999999999999999999999998863
No 9
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=6.9e-67 Score=564.72 Aligned_cols=450 Identities=24% Similarity=0.407 Sum_probs=343.7
Q ss_pred ceEecCCCcchhHHHhhcccCcCccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccccCCCeEE
Q 009727 42 EIIFNQDSSLYSYILQSSVQNPRYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLCRTPFII 121 (527)
Q Consensus 42 ~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~gvv 121 (527)
..|++|+|+.|+.++. .+|.|| ...|.+|++|+|++||+++|++|+++++||.|||||||+.+.+.. ..++++
T Consensus 34 ~~v~~p~~~~Y~~~~~--~~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~-~~~gvv 106 (530)
T 2y3s_A 34 IDSVAPGDIRYEDLRR--GENLRF----VGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVAN-SDVRVV 106 (530)
T ss_dssp CCEECTTSTTHHHHTC--CSCTTC----CCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTC-TTCCEE
T ss_pred ceEECCCCccHHHHHh--Hhhhhc----cCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCccc-CCCeEE
Confidence 4689999999999864 346666 478999999999999999999999999999999999999986542 235899
Q ss_pred EEcCCCCCeEEcCCCCEEEEcCCCCHHHHHHHHHH-cCCcccccCCCCCccccccccccCcCCCccccccccccceeEEE
Q 009727 122 IDLINMRSIEINLEDETAWVQSGANLGELYYALAM-KSLVHGFPAGLCPTVGIGGHLGGGGFGTLLRKYGLAADQVVDAY 200 (527)
Q Consensus 122 Idl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~D~v~~~~ 200 (527)
|||++||+|++|++.++|+||||++|.+|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|+++|
T Consensus 107 Idl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~e 184 (530)
T 2y3s_A 107 MDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVE 184 (530)
T ss_dssp EECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEE
T ss_pred EEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeEE
Confidence 99999999999999999999999999999999985 78 4788899999999999999999999999999999999999
Q ss_pred EEee--CCeEee---ccc-CCh--hhhhhhhccCCCceEEEEEEEEEE------------EecCc-eEEEEEEEecc---
Q 009727 201 LIDV--NGRILD---RRA-MGE--DLFWAIRGGGGSSFGIILSWKIKL------------VRVPE-TVTSFTVLKTL--- 256 (527)
Q Consensus 201 vV~~--~G~i~~---~~~-~~~--dL~~a~rG~~~g~~GIVt~~~lkl------------~p~~~-~~~~~~~~~~~--- 256 (527)
||++ +|++++ +.. +++ |||||+||||+|+|||||+++||+ +|.|+ .+..+.+.|..
T Consensus 185 vV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 264 (530)
T 2y3s_A 185 VVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEGL 264 (530)
T ss_dssp EEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTTC
T ss_pred EEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEeccccc
Confidence 9995 499743 222 455 599999998679999999999999 89875 45555555543
Q ss_pred -hhhHHHHHHHHHHhccc--CCCCc--eEEEEEEeecCCCCcceEEEEEEEEecCccchhhhhcccCC---c-CC-CCcc
Q 009727 257 -EQGALELVHRWQYIAPK--FHEDL--FIRILIVHVGNGDQKTIHANFNSLFLGKIDRLIPLMNQSFP---E-LG-LRAE 326 (527)
Q Consensus 257 -~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~l~---~-~~-~~~~ 326 (527)
.+...++++.|+++... .|++. .....+..... .. ..+.+..+|.|+.++.++++++++. + ++ +...
T Consensus 265 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~~~~~ 341 (530)
T 2y3s_A 265 DEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRS-QS--GALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPHS 341 (530)
T ss_dssp CHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECG-GG--SEEEEEEEEECCSTTHHHHHHHHHHHHHTTCSSCCEE
T ss_pred CHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccC-CC--CcEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCccc
Confidence 13345778877776533 45542 12222222211 11 1355567789988777666665332 1 23 2334
Q ss_pred cceecchHHHHHhhhcCCCCCchhhhhccccccccccccccccccCCCCHhHHHHHHHHHhcCC----ceEEEEEecCcc
Q 009727 327 DCTEMSWVESTVYFAGFSKGSPLEMLLDKKQLFKSMFKAKSDFVTEPIPFHALEGIWGRLLEEE----MAIMIMDPFGGK 402 (527)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~gga 402 (527)
.+..++|.+..........+ . .. .+++.++.|+.+.++++.++.+++.+.+.+ .+.+.++++||+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~-------~---~~-~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~GGa 410 (530)
T 2y3s_A 342 DTRRLPWLHSTRWPGIAGDG-------D---MT-GRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIAYGGK 410 (530)
T ss_dssp EEEEEEHHHHTTCHHHHCCC-------C---CC-SEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEECCGG
T ss_pred eeeeccHHHHHHhhcCCCCC-------c---cc-ccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEEecCCc
Confidence 56677888754332211111 0 01 234567778877788888999999887532 367889999999
Q ss_pred cccCCCCCCCCcccCCceEEEEEEEEeCCCcccchhhHHHHHHHHHHhhcccccC------CCCccccCCCCcccCCccc
Q 009727 403 MNEILESEVPFPHRNGVLYNIQYMVKWEANGVMASNRHIHWIRSLYKYMAPYVSR------SPRAAYINYRDLDLGTNKL 476 (527)
Q Consensus 403 ~~~~~~~~taf~~R~~~~~~~~~~~~W~~~~~d~~~~~~~~~~~~~~~l~p~~~~------~~~g~Y~Ny~d~~l~~~~~ 476 (527)
+++++.++++|+||+ ..+++++...|.+++++ +...+|++++++.+.+...+ ...|+|+||+|.+++.+.
T Consensus 411 v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~--~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~- 486 (530)
T 2y3s_A 411 VNAVPADRTAVAQRD-SILKIVYVTTWEDPAQD--PVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLADEE- 486 (530)
T ss_dssp GGGSCTTSSSCCCCS-CSEEEEEEEEECCTTCH--HHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGGCTT-
T ss_pred cccCCCCcCcccccc-cceeEEEEEecCCCcch--HHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCccccccc-
Confidence 999999999999999 78999999999877654 67899999999988733211 134799999999865311
Q ss_pred CCcchHHhhhhHhhhhcccHHHHHHHHhccCCCCCcccCCCCCCc
Q 009727 477 QNASYSEAAAWGIKYFKSNFKRLALVKSKVDPGNFFRNEQSIPPF 521 (527)
Q Consensus 477 ~~~~~~~~~~w~~~yyg~n~~RL~~IK~kyDP~~vF~~~~~i~~~ 521 (527)
-|++ ...|++.|||+||+||++||+||||+|||+++|+|+|+
T Consensus 487 ~~~s---~~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 487 WNTS---GVPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp TCCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred cccc---hhHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 0111 12499999999999999999999999999999999986
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=9.5e-66 Score=548.89 Aligned_cols=432 Identities=22% Similarity=0.316 Sum_probs=334.5
Q ss_pred cceEecCCCcchhHHHhhcccCcCccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccccCCCeE
Q 009727 41 FEIIFNQDSSLYSYILQSSVQNPRYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLCRTPFI 120 (527)
Q Consensus 41 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~gv 120 (527)
++.|++|+|+.|+..+. +|+......|.+|++|+|++||+++|++|+++++|+.+||||||+.+.+. ..+++
T Consensus 13 ~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~--~~~gv 84 (459)
T 2bvf_A 13 QGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYAT--NDGGI 84 (459)
T ss_dssp SSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTC--CSSSE
T ss_pred CceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccc--cCCeE
Confidence 67899999999998643 57766678999999999999999999999999999999999999998753 23589
Q ss_pred EEEcCCCCCeEEcCCCCEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCccccccccccCcCCCccccccccccceeEEE
Q 009727 121 IIDLINMRSIEINLEDETAWVQSGANLGELYYALAMKSLVHGFPAGLCPTVGIGGHLGGGGFGTLLRKYGLAADQVVDAY 200 (527)
Q Consensus 121 vIdl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~D~v~~~~ 200 (527)
+|||++||+|++|+++.+|+||||++|.+|+++|.++| +.+|+|.|+++||||+++|||+|++++.||+++|+|+++|
T Consensus 85 vi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~ 162 (459)
T 2bvf_A 85 VLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGAT 162 (459)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEE
T ss_pred EEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEE
Confidence 99999999999999999999999999999999999988 6788899999999999999999999999999999999999
Q ss_pred EEeeCCeEee-cccCChhhhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEecchhhHH--HHHHHHHHhcccCCCC
Q 009727 201 LIDVNGRILD-RRAMGEDLFWAIRGGGGSSFGIILSWKIKLVRVPETVTSFTVLKTLEQGAL--ELVHRWQYIAPKFHED 277 (527)
Q Consensus 201 vV~~~G~i~~-~~~~~~dL~~a~rG~~~g~~GIVt~~~lkl~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 277 (527)
||++||++++ ...+++||||++||| +|+|||||+++||++|.|+.+....+.+.. +... ++++.|+++....|+.
T Consensus 163 vV~~~G~i~~~~~~~~~dLf~a~rg~-~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (459)
T 2bvf_A 163 LVTATGDVIYCSDDERPELFWAVRGA-GPNFGVVTEVEVQLYELPRKMLAGFITWAP-SVSELAGLLTSLLDALNEMADH 240 (459)
T ss_dssp EECTTSCEEEEESSSSHHHHHHHHHH-GGGTCEEEEEEEEEEECCCCEEEEEEEECC-CHHHHHHHHHHHHHHHHHTTTT
T ss_pred EEcCCCeEEEeCCCCChhhHhHhhcc-CCccEEEEEEEEEEEECCCcEEEEEEEech-HHhhHHHHHHHHHHHHHhCcHh
Confidence 9999999998 556789999999998 699999999999999997666555555553 2344 7788888876666777
Q ss_pred ceEEEEEEeecCCCCcceEEEEEEEEecCccchhhhhcccCCcCC-CCcccceecchHHHHHhhh---cCCCCCchhhhh
Q 009727 278 LFIRILIVHVGNGDQKTIHANFNSLFLGKIDRLIPLMNQSFPELG-LRAEDCTEMSWVESTVYFA---GFSKGSPLEMLL 353 (527)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~l 353 (527)
+...+ ..... ..+...+.+...|.|+.++..+.++++ .+++ +....+..++|.+...... ..+.+
T Consensus 241 ~~~~~-~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 309 (459)
T 2bvf_A 241 IYPSV-FVGVD--ENRAPSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNAEVGSFEDG------- 309 (459)
T ss_dssp CCCEE-EEEEC--TTCCEEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHHHHSCCCCS-------
T ss_pred hcccc-ccCcc--cCCCceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhcccccccCCCC-------
Confidence 64333 11111 112234566778999887666666543 3343 2334566778887544311 00111
Q ss_pred cccccccccccc-ccccccCCCCHhHHHHHHHHHhcCC-ce-EEEEEecCcccccCCCCCCCCcccCCceEEEEEEEEeC
Q 009727 354 DKKQLFKSMFKA-KSDFVTEPIPFHALEGIWGRLLEEE-MA-IMIMDPFGGKMNEILESEVPFPHRNGVLYNIQYMVKWE 430 (527)
Q Consensus 354 ~~~~~~~~~~~~-~s~~~~~~l~~~~~~~~~~~~~~~~-~~-~~~~~~~gga~~~~~~~~taf~~R~~~~~~~~~~~~W~ 430 (527)
...+.. ++.++.+.++.+.++++++.+.+.+ .. .+.++.+||++.+ .+.++|+||+ ..| +.+...|.
T Consensus 310 ------~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~-~~~-~~~~~~w~ 379 (459)
T 2bvf_A 310 ------MSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRD-AMG-VLALAEWS 379 (459)
T ss_dssp ------CEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCS-SCE-EEEEEEEC
T ss_pred ------CcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCC-cce-EEEEEEeC
Confidence 112222 4666653345555666555554433 22 3445555888776 6679999999 567 88899998
Q ss_pred CCc-ccchhhHHHHHHHHHHhhcccccCCCCccccCCCCcccCCcccCCcchHHhhhhHhhhhccc-HHHHHHHHhccCC
Q 009727 431 ANG-VMASNRHIHWIRSLYKYMAPYVSRSPRAAYINYRDLDLGTNKLQNASYSEAAAWGIKYFKSN-FKRLALVKSKVDP 508 (527)
Q Consensus 431 ~~~-~d~~~~~~~~~~~~~~~l~p~~~~~~~g~Y~Ny~d~~l~~~~~~~~~~~~~~~w~~~yyg~n-~~RL~~IK~kyDP 508 (527)
++. ++ +.+.+|++.+.+.+.|+......|+|+||+|.+. ++|.+.|||+| |+||++||+||||
T Consensus 380 ~~~~~~--~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~-------------~~~~~~~yG~~n~~rL~~iK~kyDP 444 (459)
T 2bvf_A 380 GAAPGS--EKYPELARELDAALLRAGVTTSGFGLLNNNSEVT-------------AEMVAEVYKPEVYSRLAAVKREYDP 444 (459)
T ss_dssp TTSTTT--THHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC-------------HHHHHHHHCHHHHHHHHHHHHHHCT
T ss_pred CCccch--HHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc-------------hHHHHHHhCcchHHHHHHHHHHhCc
Confidence 765 33 4578999999999998753112478999999862 46899999987 9999999999999
Q ss_pred CCCcccCCCCCC
Q 009727 509 GNFFRNEQSIPP 520 (527)
Q Consensus 509 ~~vF~~~~~i~~ 520 (527)
+|+|+++|+|+|
T Consensus 445 ~~vF~~~~~I~p 456 (459)
T 2bvf_A 445 ENRFRHNYNIDP 456 (459)
T ss_dssp TCCCCSSSCCCC
T ss_pred ccccCCCCCCCC
Confidence 999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=2.8e-41 Score=366.43 Aligned_cols=229 Identities=15% Similarity=0.175 Sum_probs=179.2
Q ss_pred chhhHHHhhhhccCCCCCCcceEecCCCcchhHHHhhcccCcCccCCCCCCccEEEecCCHHHHHHHHHHHHh--C-CCc
Q 009727 22 IQEDFMHCMSTQFGEYTRSFEIIFNQDSSLYSYILQSSVQNPRYLNATTPKPLLIITPFHESEIQAAVFCSKN--H-DLQ 98 (527)
Q Consensus 22 ~~~~~~~cl~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~--~-~~~ 98 (527)
..+.+..||.+... .+.|.+ ++..+... ...|+......|.+|++|+|++||+++|++|++ + ++|
T Consensus 30 ~~~~~~~~l~~~~~-----~~~v~~-~~~~~~~~------~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~ 97 (534)
T 1w1o_A 30 RGRPWPASLAALAL-----DGKLRT-DSNATAAA------STDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYT 97 (534)
T ss_dssp ----------CTTT-----TTCEEC-SHHHHHHT------SCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCC
T ss_pred chHHHHHHHHhcCC-----CceEec-CHHHHHHH------hccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCce
Confidence 56688888887332 344554 22233332 224666566899999999999999999999998 6 999
Q ss_pred EEEEcCCCCCCCCccccCCCeEEEEcCCCCCe------EEcCCCCEEEEcCCCCHHHHHHHHHHcCCccccc-CCCCCcc
Q 009727 99 IRVRSGGHDYEGLSYLCRTPFIIIDLINMRSI------EINLEDETAWVQSGANLGELYYALAMKSLVHGFP-AGLCPTV 171 (527)
Q Consensus 99 ~~v~ggGh~~~g~s~~~~~~gvvIdl~~~~~i------~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~-~g~~~~v 171 (527)
++++|||||+.|.+... ++++|||++||+| ++|+++.+++||||++|.+|++++.++|+ ..+ .+.+..+
T Consensus 98 v~~~G~G~~~~g~~~~~--~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl--~~~~~~~~~~~ 173 (534)
T 1w1o_A 98 IAFRGRGHSLMGQAFAP--GGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGV--APRSWTDYLYL 173 (534)
T ss_dssp EEEESSCCCSSSTTCCT--TSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTE--EESCCCSSCCS
T ss_pred EEEECCCCCCCCCcCCC--CeEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCCC--cccCCCCCCCE
Confidence 99999999999876543 5899999999985 88988899999999999999999999985 333 3455678
Q ss_pred ccccccccCcCCCccccccccccceeEEEEEeeCCeEee-cccCChhhhhhhhccCCCceEEEEEEEEEEEecCceEEEE
Q 009727 172 GIGGHLGGGGFGTLLRKYGLAADQVVDAYLIDVNGRILD-RRAMGEDLFWAIRGGGGSSFGIILSWKIKLVRVPETVTSF 250 (527)
Q Consensus 172 gigG~~~ggg~g~~~~~~G~~~D~v~~~~vV~~~G~i~~-~~~~~~dL~~a~rG~~~g~~GIVt~~~lkl~p~~~~~~~~ 250 (527)
+|||.+++||.|..+.+||.++|+|+++|||++||++++ ...+|+||||++||| +|+|||||+++||++|.|+...++
T Consensus 174 tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs-~G~~GIVt~~~l~l~p~~~~~~~~ 252 (534)
T 1w1o_A 174 TVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGG-LGQFGVITRARIAVEPAPARARWV 252 (534)
T ss_dssp BHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTC-TTCSEEEEEEEEEEEECCSEEEEE
T ss_pred EeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCC-CCCcEEEEEEEEEEEECCcceEEE
Confidence 999999999999999999999999999999999999998 556789999999999 789999999999999999876666
Q ss_pred EEEecchhhHHHHHHHH
Q 009727 251 TVLKTLEQGALELVHRW 267 (527)
Q Consensus 251 ~~~~~~~~~~~~~~~~~ 267 (527)
.+.+...+.+.+.+..+
T Consensus 253 ~~~~~~~~~~~~~~~~~ 269 (534)
T 1w1o_A 253 RFVYTDFAAFSADQERL 269 (534)
T ss_dssp EEEESCHHHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHHH
Confidence 66665444444444444
No 12
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=4.4e-37 Score=340.43 Aligned_cols=203 Identities=20% Similarity=0.185 Sum_probs=179.9
Q ss_pred ccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccc---CCCeEEEEcCCCCCe-EEcCCCCEEE
Q 009727 65 YLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLC---RTPFIIIDLINMRSI-EINLEDETAW 140 (527)
Q Consensus 65 ~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~---~~~gvvIdl~~~~~i-~~d~~~~~v~ 140 (527)
|+......|++||+|+|++||+++|++|+++++||+++|||||+.|.+... ..++|+|||++||+| +||+++++++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 566667899999999999999999999999999999999999988665443 235799999999998 9999999999
Q ss_pred EcCCCCHHHHHHHHHHcCCcccccCCCCCccccccccccCcCCCccccccccccceeEEEEEeeCCeEee-----cccCC
Q 009727 141 VQSGANLGELYYALAMKSLVHGFPAGLCPTVGIGGHLGGGGFGTLLRKYGLAADQVVDAYLIDVNGRILD-----RRAMG 215 (527)
Q Consensus 141 v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~D~v~~~~vV~~~G~i~~-----~~~~~ 215 (527)
||||+++.+|.++|.++|+.+++.+++...++|||++++++.|..+.+||.+.|+|+++|||++||++++ +...+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999997666667888889999999999999999999999999999999999999986 24567
Q ss_pred hhhhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEecchhhHHHHHHHHH
Q 009727 216 EDLFWAIRGGGGSSFGIILSWKIKLVRVPETVTSFTVLKTLEQGALELVHRWQ 268 (527)
Q Consensus 216 ~dL~~a~rG~~~g~~GIVt~~~lkl~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (527)
+||+|+++|+ .|+|||||+++|||+|.|+....+.+.|...+++.+++..+.
T Consensus 358 yDL~~L~iGS-EGTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i~ 409 (658)
T 4bby_A 358 PDIHHFIMGS-EGTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREIA 409 (658)
T ss_dssp SCTHHHHTTC-TTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred cCHHHHhccC-CCcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHHH
Confidence 9999999999 899999999999999999987777777776566666665544
No 13
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.3e-36 Score=318.20 Aligned_cols=204 Identities=24% Similarity=0.261 Sum_probs=179.0
Q ss_pred CccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccccCCCeEEEEcCCCCCe-EEcCCCCEEEEc
Q 009727 64 RYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLCRTPFIIIDLINMRSI-EINLEDETAWVQ 142 (527)
Q Consensus 64 r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~gvvIdl~~~~~i-~~d~~~~~v~v~ 142 (527)
.|+......|.+|++|+|++||+++|++|+++++|++++|||||+.|.+.. ..++++|||++||+| ++|+++.+++||
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~-~~ggvvIdl~~m~~i~~id~~~~~v~V~ 121 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTP-HNGEVVISLKRMDKIREIDTSSNTITVE 121 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCC-CSSCEEEECTTCCCEEEEETTTTEEEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccC-CCCcEEEEeeCCCceEEEcCCCCeEEEC
Confidence 466555679999999999999999999999999999999999999987764 335899999999999 899999999999
Q ss_pred CCCCHHHHHHHHHHcCCcccccCCCCCccccccccccCcCCCccccccccccceeEEEEEeeCCeEee------cccCCh
Q 009727 143 SGANLGELYYALAMKSLVHGFPAGLCPTVGIGGHLGGGGFGTLLRKYGLAADQVVDAYLIDVNGRILD------RRAMGE 216 (527)
Q Consensus 143 ~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~D~v~~~~vV~~~G~i~~------~~~~~~ 216 (527)
||++|.+|+++|.++|+.+++..+++..++|||++.+++.|..+.+||..+|+|+++|||++||++++ ++..++
T Consensus 122 aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~ 201 (476)
T 3pm9_A 122 AGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGY 201 (476)
T ss_dssp TTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSC
T ss_pred CCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCc
Confidence 99999999999999996444445777788999999999999999999999999999999999999986 234578
Q ss_pred hhhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEecchhhHHHHHHHHHH
Q 009727 217 DLFWAIRGGGGSSFGIILSWKIKLVRVPETVTSFTVLKTLEQGALELVHRWQY 269 (527)
Q Consensus 217 dL~~a~rG~~~g~~GIVt~~~lkl~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (527)
||+|+++|+ +|+|||||+++||++|.|+....+.+.+...+++.+++..++.
T Consensus 202 dl~~l~~Gs-~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 202 DLRDLFIGA-EGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CCHHHHTTS-TTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CHHHHhccC-CCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 999999998 7999999999999999998776666777666666667766654
No 14
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=5.1e-34 Score=308.06 Aligned_cols=202 Identities=20% Similarity=0.270 Sum_probs=170.2
Q ss_pred CccCCCCCCccEEEecCCHHHHHHHHHHHHh-CCCcEEEEcCCCCCCCCccccCCCeEEEEcCCCCCeEEcC-----CC-
Q 009727 64 RYLNATTPKPLLIITPFHESEIQAAVFCSKN-HDLQIRVRSGGHDYEGLSYLCRTPFIIIDLINMRSIEINL-----ED- 136 (527)
Q Consensus 64 r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~-~~~~~~v~ggGh~~~g~s~~~~~~gvvIdl~~~~~i~~d~-----~~- 136 (527)
.|+......|.+|++|+|++||+++|++|++ +++|+++||||||+.|.+... ++|+|||++||+|++|+ +.
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~--~gvvidl~~m~~i~i~~~~~~~~~~ 130 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAE--GGLVVDMSTTAENHFEVGYLSGGDA 130 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCT--TSEEEEGGGGTTSCEEEEECCSSSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCC--CEEEEECcCCCCcEEeecccCCCCC
Confidence 4665556789999999999999999999996 999999999999999876543 48999999999997776 55
Q ss_pred -CEEEEcCCCCHHHHHHHHH-HcCCcccccCCCCCccccccccccCcCCCccccccccccceeEEEEEeeCCeEee-ccc
Q 009727 137 -ETAWVQSGANLGELYYALA-MKSLVHGFPAGLCPTVGIGGHLGGGGFGTLLRKYGLAADQVVDAYLIDVNGRILD-RRA 213 (527)
Q Consensus 137 -~~v~v~~G~~~~~l~~~l~-~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~D~v~~~~vV~~~G~i~~-~~~ 213 (527)
.+++||||++|.++++++. ++|+. ....+.++.++|||.++++|.|..+.+||.++|+|+++|||++||++++ ...
T Consensus 131 ~~~v~v~aGv~~~~l~~~~l~~~Gl~-~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~ 209 (524)
T 2exr_A 131 TAFVDVSGGALWEDVLKRCVSEYGLA-PRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSEI 209 (524)
T ss_dssp SEEEEEETTCBHHHHHHHHHHHHSEE-CSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEESS
T ss_pred ceEEEEeCCcCHHHHHHHHHHHcCCC-CCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECCC
Confidence 7999999999999865544 88853 2223455678999999999999999999999999999999999999998 445
Q ss_pred CChhhhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEecchhhHHHHHHHHHH
Q 009727 214 MGEDLFWAIRGGGGSSFGIILSWKIKLVRVPETVTSFTVLKTLEQGALELVHRWQY 269 (527)
Q Consensus 214 ~~~dL~~a~rG~~~g~~GIVt~~~lkl~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (527)
+++||||++||+ .|+|||||+++||++|.|+...++.+.|...+++.+.+..+.+
T Consensus 210 ~~~dL~~~~~Gs-~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~~ 264 (524)
T 2exr_A 210 ENSELFFSVLGG-LGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLVS 264 (524)
T ss_dssp SSHHHHHHHTTC-TTSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred CChhHHhHhhcC-CCccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHHHH
Confidence 689999999999 7999999999999999999776666777655555555555543
No 15
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=7e-33 Score=295.36 Aligned_cols=197 Identities=20% Similarity=0.220 Sum_probs=166.7
Q ss_pred CccCCCCCCccEEEecCCHHHHHHHHHHHHhC--CCcEEEEcCCCCCCCCccccCCCeEEEEcCCCCCe-EEcCCCCEEE
Q 009727 64 RYLNATTPKPLLIITPFHESEIQAAVFCSKNH--DLQIRVRSGGHDYEGLSYLCRTPFIIIDLINMRSI-EINLEDETAW 140 (527)
Q Consensus 64 r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~--~~~~~v~ggGh~~~g~s~~~~~~gvvIdl~~~~~i-~~d~~~~~v~ 140 (527)
+|.. ....|.+|++|+|++||+++|++|+++ ++|+.++|+|||+.+.+.. .+|++|||++||+| ++|+++++|+
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~--~~gvvIdl~~l~~i~~~d~~~~~v~ 111 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQN--GGGLVIDMTPLNTIHSIDADTKLVD 111 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCC--TTSEEEECTTCCCEEEEETTTTEEE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCC--cCeEEEECccCCCceEEcCCCCEEE
Confidence 5743 478999999999999999999999999 7999999999999766432 35899999999999 9999999999
Q ss_pred EcCCCCHHHHHHHHHHcCCcccccCCCCCccccccccccCcCCCccccccccccceeEEEEEeeCCeEee-ccc-CChhh
Q 009727 141 VQSGANLGELYYALAMKSLVHGFPAGLCPTVGIGGHLGGGGFGTLLRKYGLAADQVVDAYLIDVNGRILD-RRA-MGEDL 218 (527)
Q Consensus 141 v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~D~v~~~~vV~~~G~i~~-~~~-~~~dL 218 (527)
||||+++.+|+++|.++|+.+...+|. +.++|||.+.+|++|..+..||..+|+|+++|||++||++++ +.. +++||
T Consensus 112 v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~dL 190 (481)
T 4feh_A 112 IDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAEL 190 (481)
T ss_dssp EETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTHHH
T ss_pred EcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCChHH
Confidence 999999999999999999643332344 578899999999999999999999999999999999999998 444 78999
Q ss_pred hhhhhccCCCceEEEEEEEEEEEecCceEEEE-EEEecchhhHHHHHHHHH
Q 009727 219 FWAIRGGGGSSFGIILSWKIKLVRVPETVTSF-TVLKTLEQGALELVHRWQ 268 (527)
Q Consensus 219 ~~a~rG~~~g~~GIVt~~~lkl~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 268 (527)
||++||| .|+|||||+++||++|.|+..... ...+ .+..++++.+.
T Consensus 191 f~a~rgs-~G~~GIIt~~tl~l~p~~~~~~~~~~~~~---~~l~~~~~~~~ 237 (481)
T 4feh_A 191 FWATVGG-NGLTGIIMRATIEMTPTSTAYFIADGDVT---ASLDETIALHS 237 (481)
T ss_dssp HHHHTTC-TTTTCEEEEEEEECEECSCSEEEEEEEEC---SSHHHHHHHHS
T ss_pred HHHhhcc-CCCceEEEEEEEEEEeCCccEEEEEEEeC---CCHHHHHHHHH
Confidence 9999998 799999999999999998643322 2222 23445555554
No 16
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=4.1e-31 Score=278.78 Aligned_cols=175 Identities=19% Similarity=0.288 Sum_probs=156.2
Q ss_pred CccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccccCCCeEEEEcCCCCCe-EEcCCCCEEEEc
Q 009727 64 RYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLCRTPFIIIDLINMRSI-EINLEDETAWVQ 142 (527)
Q Consensus 64 r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~gvvIdl~~~~~i-~~d~~~~~v~v~ 142 (527)
.|+......|.+|++|+|++||+++|++| +|+.++|||||+.+.+. ++.++++|||++||+| ++|+++++|+||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~-~~~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAE-PGDGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTC-CCTTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCcc-CCCCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 57777778999999999999999999998 89999999999998866 3346899999999998 999999999999
Q ss_pred CCCCHHHHHHHHHHcCCccccc-CCCCCccccccccccCcCCCccccccccccceeEEEEEeeCCeEee-cccCChhhhh
Q 009727 143 SGANLGELYYALAMKSLVHGFP-AGLCPTVGIGGHLGGGGFGTLLRKYGLAADQVVDAYLIDVNGRILD-RRAMGEDLFW 220 (527)
Q Consensus 143 ~G~~~~~l~~~l~~~g~~~~~~-~g~~~~vgigG~~~ggg~g~~~~~~G~~~D~v~~~~vV~~~G~i~~-~~~~~~dL~~ 220 (527)
||+++.+|.++|.++|+ .+| .+.++.++|||.+++|++|.. ..||..+|+|+++|+|++||++++ ...+++ ||
T Consensus 87 aG~~l~~l~~~l~~~Gl--~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f~ 161 (422)
T 2vfr_A 87 GGVRYAELARVVHARGL--ALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--FG 161 (422)
T ss_dssp TTCBHHHHHHHHHHTTE--ECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--GG
T ss_pred CCCCHHHHHHHHHHcCC--cccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--cc
Confidence 99999999999999996 455 477888999999999999976 699999999999999999999998 334444 89
Q ss_pred hhhccCCCceEEEEEEEEEEEecCceEEE
Q 009727 221 AIRGGGGSSFGIILSWKIKLVRVPETVTS 249 (527)
Q Consensus 221 a~rG~~~g~~GIVt~~~lkl~p~~~~~~~ 249 (527)
+++|+ .|++||||+++||+.|.|+....
T Consensus 162 ~~~g~-~G~lGvit~~~l~l~p~~~~~~~ 189 (422)
T 2vfr_A 162 GAVTS-LGALGVVTSLTLDLEPAYEMEQH 189 (422)
T ss_dssp GTSSC-TTTTCEEEEEEEECEECCEEEEE
T ss_pred eEEec-CCCCEEEEEEEEEEEecCceEEE
Confidence 99998 79999999999999999875433
No 17
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.98 E-value=5.1e-32 Score=294.89 Aligned_cols=200 Identities=22% Similarity=0.244 Sum_probs=170.0
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccccC--CCeEEEEcCCCCCe-EEcCCCCEEEEcCCC
Q 009727 69 TTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLCR--TPFIIIDLINMRSI-EINLEDETAWVQSGA 145 (527)
Q Consensus 69 ~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~--~~gvvIdl~~~~~i-~~d~~~~~v~v~~G~ 145 (527)
....|.+|++|+|++||+++|++|+++++|++++|||||+.|.+.... .++|+|||++||+| ++|+++.+++||||+
T Consensus 134 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv 213 (584)
T 2uuu_A 134 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGI 213 (584)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred cCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCC
Confidence 346899999999999999999999999999999999999987665321 35789999999999 899999999999999
Q ss_pred CHHHHHHHHHHcCCcccccCCCCCccccccccccCcCCCccccccccccceeEEEEEeeCCeEee----cccCChhhhhh
Q 009727 146 NLGELYYALAMKSLVHGFPAGLCPTVGIGGHLGGGGFGTLLRKYGLAADQVVDAYLIDVNGRILD----RRAMGEDLFWA 221 (527)
Q Consensus 146 ~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~D~v~~~~vV~~~G~i~~----~~~~~~dL~~a 221 (527)
++.+|+++|.++|+.++..+++...++|||++++++.|+.+.+||.++|+|+++|||++||++++ ++..++||+|+
T Consensus 214 ~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~ 293 (584)
T 2uuu_A 214 MGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHI 293 (584)
T ss_dssp BHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHH
T ss_pred cHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhh
Confidence 99999999999996443333334568999999999999999999999999999999999999886 34578999999
Q ss_pred hhccCCCceEEEEEEEEEEEecCceEEEEEEEecchhhHHHHHHHHHH
Q 009727 222 IRGGGGSSFGIILSWKIKLVRVPETVTSFTVLKTLEQGALELVHRWQY 269 (527)
Q Consensus 222 ~rG~~~g~~GIVt~~~lkl~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (527)
++|+ +|+|||||+++||++|.|+....+.+.|...+++.+++..+..
T Consensus 294 ~~Gs-eGtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~ 340 (584)
T 2uuu_A 294 ILGS-EGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRS 340 (584)
T ss_dssp HTTC-TTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred hccC-CCCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHHh
Confidence 9998 7999999999999999998776667777655555556555543
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.97 E-value=8.1e-31 Score=283.41 Aligned_cols=199 Identities=21% Similarity=0.293 Sum_probs=164.7
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC-CCccccCCCeEEEEcCCCCCe-EEcCCCCEEEEcCCCCH
Q 009727 70 TPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYE-GLSYLCRTPFIIIDLINMRSI-EINLEDETAWVQSGANL 147 (527)
Q Consensus 70 ~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~-g~s~~~~~~gvvIdl~~~~~i-~~d~~~~~v~v~~G~~~ 147 (527)
...|.+|++|+|++||+++|++|+++++|++++|+|||+. |.+.....++++|||++||+| ++|+++.+++||||+++
T Consensus 54 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~ 133 (520)
T 1wvf_A 54 AHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTF 133 (520)
T ss_dssp GGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCH
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCH
Confidence 4689999999999999999999999999999999999987 654432245899999999999 99999999999999999
Q ss_pred HHHHHHHHHcCCccccc-CCCCCccccccccccCcCCCccccccccccceeEEEEEeeCCeEeec---ccCChhhhhhhh
Q 009727 148 GELYYALAMKSLVHGFP-AGLCPTVGIGGHLGGGGFGTLLRKYGLAADQVVDAYLIDVNGRILDR---RAMGEDLFWAIR 223 (527)
Q Consensus 148 ~~l~~~l~~~g~~~~~~-~g~~~~vgigG~~~ggg~g~~~~~~G~~~D~v~~~~vV~~~G~i~~~---~~~~~dL~~a~r 223 (527)
.+|+++|.++|+.+... .+....+||||.+++||.|.. +||..+|+|+++|||++||++++. ...++|+|++.+
T Consensus 134 ~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~ 211 (520)
T 1wvf_A 134 GQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFK 211 (520)
T ss_dssp HHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCS
T ss_pred HHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhc
Confidence 99999999999643321 122337889999999998876 899999999999999999999983 235789877777
Q ss_pred ccCC---------CceEEEEEEEEEEEecCceEEEEEEEecchhhHHHHHHHHHHh
Q 009727 224 GGGG---------SSFGIILSWKIKLVRVPETVTSFTVLKTLEQGALELVHRWQYI 270 (527)
Q Consensus 224 G~~~---------g~~GIVt~~~lkl~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (527)
|+.+ ++|||||+++||++|.|+....+.+.|...+++.++++.++.+
T Consensus 212 ~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~ 267 (520)
T 1wvf_A 212 WGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPL 267 (520)
T ss_dssp CCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHH
T ss_pred CCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHH
Confidence 6622 4999999999999999987666677776555665555555543
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=7.5e-30 Score=277.48 Aligned_cols=199 Identities=15% Similarity=0.120 Sum_probs=166.0
Q ss_pred cceEecC-CCcchhHHHhhcccCcCccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccccC---
Q 009727 41 FEIIFNQ-DSSLYSYILQSSVQNPRYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLCR--- 116 (527)
Q Consensus 41 ~~~v~~p-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~--- 116 (527)
+..+++| +++.|+... ..|+......|.+|++|+|++||+++|++|+++++|+.++|+|||+.+.+...+
T Consensus 9 ~~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 4567888 999998743 258877778999999999999999999999999999999999999976443222
Q ss_pred CCeEEEEc-CCCCCeEEcC--CCCEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCccccccccccCcCCCc--------
Q 009727 117 TPFIIIDL-INMRSIEINL--EDETAWVQSGANLGELYYALAMKSLVHGFPAGLCPTVGIGGHLGGGGFGTL-------- 185 (527)
Q Consensus 117 ~~gvvIdl-~~~~~i~~d~--~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~-------- 185 (527)
.++++||| ++||+|++|+ +.++|+||||+++.+|+++|.++|+.+.. .+..+.++|||.+.+|++|..
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~-~~~~~~~TvGG~i~~~~~G~~l~~gG~~~ 161 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLGWAN-LPAPGVLSIGGALAVNAHGAALPAVGQTT 161 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSS-CCSCTTCBHHHHHHTTCCCSCCCCTTCCC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccc-cCCCCCcccCCCcccCCcccccccCCccc
Confidence 25899999 8999999998 78999999999999999999999964333 233366889999888777765
Q ss_pred --cccccccccceeEEEEEeeCCe---EeecccCChhhhhhhhccCCCceEEEEEEEEEEEecCceEEE
Q 009727 186 --LRKYGLAADQVVDAYLIDVNGR---ILDRRAMGEDLFWAIRGGGGSSFGIILSWKIKLVRVPETVTS 249 (527)
Q Consensus 186 --~~~~G~~~D~v~~~~vV~~~G~---i~~~~~~~~dL~~a~rG~~~g~~GIVt~~~lkl~p~~~~~~~ 249 (527)
+..||..+|+|+++|||++||+ +++...+++||+|+++|. |. ||||+++||++|.++....
T Consensus 162 ~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~--G~-giIt~~tl~l~p~~~~~~~ 227 (561)
T 2i0k_A 162 LPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNL--GR-CFLTSVTMQAGPNFRQRCQ 227 (561)
T ss_dssp CTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCT--TS-SCEEEEEEECEECCEEEEE
T ss_pred ccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcC--CC-EEEEEEEEEEEECCceEEE
Confidence 6789999999999999999999 666444579999999965 34 8999999999999875433
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=8.7e-29 Score=269.41 Aligned_cols=200 Identities=17% Similarity=0.130 Sum_probs=163.6
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC-CCccccCCCeEEEEc-CCCCCe-EEcCCCCEEEEcCCC
Q 009727 69 TTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYE-GLSYLCRTPFIIIDL-INMRSI-EINLEDETAWVQSGA 145 (527)
Q Consensus 69 ~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~-g~s~~~~~~gvvIdl-~~~~~i-~~d~~~~~v~v~~G~ 145 (527)
....|.+||+|+|++||+++|++|+++++|++++|+|||+. |.+.....++|+||| ++||+| ++|+++.+|+||||+
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv 146 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGV 146 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCC
Confidence 34689999999999999999999999999999999999986 554321235899999 999999 999999999999999
Q ss_pred CHHHHHHHHHHcCCc--ccccCCCCCccccccccccCcCCCccccccccccceeEEEEEeeCCeEeec-c--cCCh----
Q 009727 146 NLGELYYALAMKSLV--HGFPAGLCPTVGIGGHLGGGGFGTLLRKYGLAADQVVDAYLIDVNGRILDR-R--AMGE---- 216 (527)
Q Consensus 146 ~~~~l~~~l~~~g~~--~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~D~v~~~~vV~~~G~i~~~-~--~~~~---- 216 (527)
++.+|+++|.++|+. +++.++....+||||.++++|.|.. +||..+|+|+++|||++||++++. . ..++
T Consensus 147 ~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~ 224 (560)
T 1e8g_A 147 TYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPE 224 (560)
T ss_dssp BHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGG
T ss_pred CHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccc
Confidence 999999999999975 4333344446789999988888875 999999999999999999999972 2 1221
Q ss_pred -----------hhhhhhhcc----------CCCceEEEEEEEEEEEecCceEEEEEEEecchhhHHHHHHHHHHh
Q 009727 217 -----------DLFWAIRGG----------GGSSFGIILSWKIKLVRVPETVTSFTVLKTLEQGALELVHRWQYI 270 (527)
Q Consensus 217 -----------dL~~a~rG~----------~~g~~GIVt~~~lkl~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (527)
+++|+++++ .+|+|||||+++||++|.|+....+.+.|...+++.+++..++++
T Consensus 225 ~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~ 299 (560)
T 1e8g_A 225 TMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPL 299 (560)
T ss_dssp GTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHH
T ss_pred cccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHH
Confidence 666766543 247999999999999999998777777777656666666655554
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=3.2e-29 Score=267.31 Aligned_cols=179 Identities=15% Similarity=0.203 Sum_probs=150.9
Q ss_pred CccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccc---CCCeEEEEcC-CCCCeEEcCC--CC
Q 009727 64 RYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLC---RTPFIIIDLI-NMRSIEINLE--DE 137 (527)
Q Consensus 64 r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~---~~~gvvIdl~-~~~~i~~d~~--~~ 137 (527)
.|+......|.+|++|+|++||+++|++|+++++||.++|+|||+.+.++.. ..++++|||+ +||+|++|++ .+
T Consensus 21 nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I~vD~~~~~~ 100 (540)
T 3js8_A 21 NWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAMSIDASGPVA 100 (540)
T ss_dssp CTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCEEEECSSSSE
T ss_pred ccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCEEECCCCCcc
Confidence 5888888899999999999999999999999999999999999986333222 2358999995 7999999985 57
Q ss_pred EEEEcCCCCHHHHHHHHHHcCCcccccC-CCCCccccccccccCcCCCc----------cccccccccceeEEEEEeeCC
Q 009727 138 TAWVQSGANLGELYYALAMKSLVHGFPA-GLCPTVGIGGHLGGGGFGTL----------LRKYGLAADQVVDAYLIDVNG 206 (527)
Q Consensus 138 ~v~v~~G~~~~~l~~~l~~~g~~~~~~~-g~~~~vgigG~~~ggg~g~~----------~~~~G~~~D~v~~~~vV~~~G 206 (527)
+|+||||+++.+|+++|.++|+ .++. +..+.++|||.+++|++|.. +.+||..+|+|++++||++||
T Consensus 101 tVtV~AGv~l~~L~~~L~~~GL--~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~adG 178 (540)
T 3js8_A 101 KVTAQAGITMEALLTGLEKAGL--GVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDK 178 (540)
T ss_dssp EEEEETTSBHHHHHHHHHHTTE--ECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEET
T ss_pred EEEEccCCCHHHHHHHHHHcCC--EEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCCC
Confidence 9999999999999999999995 4442 33467899999999999886 589999999999999999999
Q ss_pred e-----EeecccCChhhhhhhhccCCCceEEEEEEEEEEEecCceE
Q 009727 207 R-----ILDRRAMGEDLFWAIRGGGGSSFGIILSWKIKLVRVPETV 247 (527)
Q Consensus 207 ~-----i~~~~~~~~dL~~a~rG~~~g~~GIVt~~~lkl~p~~~~~ 247 (527)
+ +++.+.+++||+ ++|+| .|+ ||||+++||++|.+...
T Consensus 179 ~~~~~~i~~~s~~~~DL~-a~r~G-~G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 179 ASGAYALRKFARNDPQIA-PLLAH-VGR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp TTTEEEEEEEETTSGGGH-HHHTC-TTS-SCEEEEEEEEEECCEEE
T ss_pred CCceeeEEEeCCCChhHH-HHHhc-CCC-eEEEEEEEEEEECCceE
Confidence 8 666444689985 55555 355 69999999999998643
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.96 E-value=3.6e-29 Score=270.82 Aligned_cols=198 Identities=13% Similarity=0.084 Sum_probs=167.1
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccccCC----CeEEEEcCCCCCe-EEcCCCCEEEEcC
Q 009727 69 TTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLCRT----PFIIIDLINMRSI-EINLEDETAWVQS 143 (527)
Q Consensus 69 ~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~----~gvvIdl~~~~~i-~~d~~~~~v~v~~ 143 (527)
....|.+|++|+|++||+++|++|+++++||+++|||||+.|.++..+. ++++|||++||+| ++|+ .++|+|||
T Consensus 42 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~a 120 (571)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYP 120 (571)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECT
T ss_pred cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcC
Confidence 3478999999999999999999999999999999999999987765432 3899999999999 7995 57899999
Q ss_pred CCCHHHHHHHHHHcCCcccccC-CCCCccccccccccCcCCCcccccccccc----------------ceeEEEEEeeCC
Q 009727 144 GANLGELYYALAMKSLVHGFPA-GLCPTVGIGGHLGGGGFGTLLRKYGLAAD----------------QVVDAYLIDVNG 206 (527)
Q Consensus 144 G~~~~~l~~~l~~~g~~~~~~~-g~~~~vgigG~~~ggg~g~~~~~~G~~~D----------------~v~~~~vV~~~G 206 (527)
|+++.+|.++|.++|+.++... +.|..++|||.+++++.|..+.+||..+| +|+++|||++||
T Consensus 121 Gv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG 200 (571)
T 1f0x_A 121 GTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPE 200 (571)
T ss_dssp TCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHH
T ss_pred CcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCC
Confidence 9999999999999996332222 34556789999999999999999999999 999999999999
Q ss_pred eEee-c-----------------ccCCh-----------------hhhhhh--hccCCCceEEEEEEEEEEEecCceEEE
Q 009727 207 RILD-R-----------------RAMGE-----------------DLFWAI--RGGGGSSFGIILSWKIKLVRVPETVTS 249 (527)
Q Consensus 207 ~i~~-~-----------------~~~~~-----------------dL~~a~--rG~~~g~~GIVt~~~lkl~p~~~~~~~ 249 (527)
++++ . ...++ ||+|++ +|+ +|+||| |+++||++|.|+....
T Consensus 201 ~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gs-eGtlGV-t~~tl~l~p~p~~~~~ 278 (571)
T 1f0x_A 201 QILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGC-AGKLAV-FAVRLDTFEAEKNQQV 278 (571)
T ss_dssp HHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTC-TTSSEE-EEEEEECEECCSSCEE
T ss_pred cEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCC-CCceeE-EEEEEEEEecCCeEEE
Confidence 9886 2 12234 998888 988 899999 9999999999987777
Q ss_pred EEEEecchhhHHHHHHHHHH
Q 009727 250 FTVLKTLEQGALELVHRWQY 269 (527)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~ 269 (527)
+.+.+...+++.+++..+.+
T Consensus 279 ~~~~~~~~~~a~~~~~~~~~ 298 (571)
T 1f0x_A 279 FYIGTNQPEVLTEIRRHILA 298 (571)
T ss_dssp EEEEESCHHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHH
Confidence 77777666666666666653
No 23
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.92 E-value=2e-25 Score=227.58 Aligned_cols=165 Identities=13% Similarity=0.065 Sum_probs=146.4
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccccCCCeEEEEcCCCCCeEEcC--CCCEEEEcCCCC
Q 009727 69 TTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLCRTPFIIIDLINMRSIEINL--EDETAWVQSGAN 146 (527)
Q Consensus 69 ~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~gvvIdl~~~~~i~~d~--~~~~v~v~~G~~ 146 (527)
....|.++++|+|++||+++|++|+++++|+.++|+|||..+.. . .+|+||+++ |++|++++ +..+++|+||++
T Consensus 27 igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d--~-~~GvVI~l~-~~~i~v~~~~~~~~v~v~AG~~ 102 (357)
T 3i99_A 27 IEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTC--H-YTGMIVVNR-LNGIEHQQDDDYHRLHVAGGED 102 (357)
T ss_dssp CSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECS--C-EEEEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred CCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCC--C-CCeEEEEcC-CCceEEeccCCceEEEEeCCCc
Confidence 45688999999999999999999999999999999999987652 2 458999998 99998754 456899999999
Q ss_pred HHHHHHHHHHcCCcccccCCCCCccccccccccCcCCCccccccc-cccceeEEEEEee-CCeEeecccCChhhhhhhhc
Q 009727 147 LGELYYALAMKSLVHGFPAGLCPTVGIGGHLGGGGFGTLLRKYGL-AADQVVDAYLIDV-NGRILDRRAMGEDLFWAIRG 224 (527)
Q Consensus 147 ~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~-~~D~v~~~~vV~~-~G~i~~~~~~~~dL~~a~rG 224 (527)
|.+|.+++.++|+ .|.++.+||+| +.||+.+++.+.||. ++|+|+++++|++ +|++++.. +.||+|+||+
T Consensus 103 ~~~l~~~a~~~Gl-----~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~YR~ 174 (357)
T 3i99_A 103 WPSLVSWCVEQGI-----GGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGYRD 174 (357)
T ss_dssp HHHHHHHHHHTTC-----TTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBTTB
T ss_pred HHHHHHHHHHcCC-----cCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCccccc
Confidence 9999999999996 68899999999 679999999999997 8999999999999 99999843 3799999998
Q ss_pred cCC----CceEEEEEEEEEEEecCc
Q 009727 225 GGG----SSFGIILSWKIKLVRVPE 245 (527)
Q Consensus 225 ~~~----g~~GIVt~~~lkl~p~~~ 245 (527)
+.. +++||||+++|||+|.++
T Consensus 175 s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 175 SIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp CGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccCCCccCCCEEEEEEEEEEEeCCc
Confidence 743 379999999999999764
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.92 E-value=1.6e-25 Score=226.19 Aligned_cols=165 Identities=21% Similarity=0.172 Sum_probs=130.5
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccccCCCeEEEEcCCCCCeEEcCCCCEEEEcCCCCHH
Q 009727 69 TTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLCRTPFIIIDLINMRSIEINLEDETAWVQSGANLG 148 (527)
Q Consensus 69 ~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~~G~~~~ 148 (527)
....|.++++|+|++||+++|++|+++++|+.++|+|||+.+.. .+.++++|||++|++|++|. .+++||||++|.
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~--~~~~gvvI~l~~~~~I~~d~--~~v~v~aG~~~~ 126 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKD--GGIRGVILHLDLLQTIERNN--TQIVAMSGAKLI 126 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECT--TCEEEEEEECTTCCCEEEET--TEEEEETTSBHH
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCC--CCCCeEEEECCCCCcEEECC--CEEEEecCcCHH
Confidence 45689999999999999999999999999999999999987542 22358999999999998763 599999999999
Q ss_pred HHHHHHHHcCCcccccCCCCCccccccccccCcCCCccccc-cccccceeEEEEEeeCCeEeecccCChhhhhhhhccCC
Q 009727 149 ELYYALAMKSLVHGFPAGLCPTVGIGGHLGGGGFGTLLRKY-GLAADQVVDAYLIDVNGRILDRRAMGEDLFWAIRGGGG 227 (527)
Q Consensus 149 ~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~-G~~~D~v~~~~vV~~~G~i~~~~~~~~dL~~a~rG~~~ 227 (527)
+|++++.++|+ .|.+...+++|. .||+..++++.| |.++|+|+++|+|++||++++... +|++|+||++..
T Consensus 127 ~l~~~l~~~Gl-----~Gle~~~giPgT-VGGav~~NaGgyGg~~~d~v~~vevV~~~G~i~~~~~--~~~~~~yR~s~~ 198 (322)
T 3tx1_A 127 DTAKFALNESL-----SGLEFACGIPGS-IGGALHMNAGAYGGEISDVLEAATVLTQTGELKKLKR--SELKAAYRFSTI 198 (322)
T ss_dssp HHHHHHHHTTE-----ESCGGGTTCCSB-HHHHHHHTCEETTEEHHHHEEEEEEECTTSCEEEEEG--GGCC--CC-CTT
T ss_pred HHHHHHHHcCC-----cccccCCCCcch-hHHHHHhCccCcccchHhhEEEEEEEcCCCCEEEech--HHcCcchhhccc
Confidence 99999999985 133333333332 233333334445 689999999999999999998433 799999998754
Q ss_pred C-ceEEEEEEEEEEEecCc
Q 009727 228 S-SFGIILSWKIKLVRVPE 245 (527)
Q Consensus 228 g-~~GIVt~~~lkl~p~~~ 245 (527)
+ ++||||+++||++|.|+
T Consensus 199 g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 199 AEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp TGGGCEEEEEEEECEECCH
T ss_pred CCCCEEEEEEEEEEEeCCH
Confidence 4 57899999999999874
No 25
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.91 E-value=5.7e-24 Score=216.34 Aligned_cols=165 Identities=15% Similarity=0.069 Sum_probs=144.8
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccccCCCeEEEEcCCCCCeE-EcCCC-CEEEEcCCCC
Q 009727 69 TTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLCRTPFIIIDLINMRSIE-INLED-ETAWVQSGAN 146 (527)
Q Consensus 69 ~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~gvvIdl~~~~~i~-~d~~~-~~v~v~~G~~ 146 (527)
....|.++++|+|++||+++|++|+++++|+.++|||||..+.. . .+|+||+|+ |++|. ++.++ .+++|+||++
T Consensus 11 igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d--~-~~GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~ 86 (340)
T 1uxy_A 11 IDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLE--D-YRGTVIINR-IKGIEIHDEPDAWYLHVGAGEN 86 (340)
T ss_dssp CCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECS--C-EEEEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred CCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccC--C-CCeEEEEcc-CCCcEEEecCCCeEEEEecCCC
Confidence 34679999999999999999999999999999999999988652 2 358999996 99994 66666 6899999999
Q ss_pred HHHHHHHHHHcCCcccccCCCCCccccccccccCcCCCccccccc-cccceeEEEEEee-CCeEeecccCChhhhhhhhc
Q 009727 147 LGELYYALAMKSLVHGFPAGLCPTVGIGGHLGGGGFGTLLRKYGL-AADQVVDAYLIDV-NGRILDRRAMGEDLFWAIRG 224 (527)
Q Consensus 147 ~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~-~~D~v~~~~vV~~-~G~i~~~~~~~~dL~~a~rG 224 (527)
|.+|.+++.++|+ .|.++.+||+| +.||+..++.+.||. ++|+|+++++|++ +|++++.. +.|++|+||+
T Consensus 87 ~~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gYR~ 158 (340)
T 1uxy_A 87 WHRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGYRD 158 (340)
T ss_dssp HHHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBTTB
T ss_pred HHHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhccccCc
Confidence 9999999999985 68889999998 779999999999995 8999999999996 99998743 3799999998
Q ss_pred cCC----CceEEEEEEEEEEEecCc
Q 009727 225 GGG----SSFGIILSWKIKLVRVPE 245 (527)
Q Consensus 225 ~~~----g~~GIVt~~~lkl~p~~~ 245 (527)
+.. +++||||+++||+.|.++
T Consensus 159 s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 159 SIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp CGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CccCCcCCCCEEEEEEEEEEEcCCC
Confidence 732 369999999999999864
No 26
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.91 E-value=9.4e-25 Score=221.77 Aligned_cols=160 Identities=20% Similarity=0.206 Sum_probs=128.7
Q ss_pred CCCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccccCCCeEEEEcCCCCCeEEcCCCCEEEEcCCCCHH
Q 009727 69 TTPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLCRTPFIIIDLINMRSIEINLEDETAWVQSGANLG 148 (527)
Q Consensus 69 ~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~gvvIdl~~~~~i~~d~~~~~v~v~~G~~~~ 148 (527)
....|.+|++|+|++||+++|++|+++++|+.++|||||+.+.... .++++|||++||+|++|. .+++||||++|.
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~--~~gvvI~l~~m~~i~id~--~~v~v~aGv~~~ 120 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGG--IRGIVISLLSLDHIEVSD--DAIIAGSGAAII 120 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTC--EEEEEEECTTCCCEEEET--TEEEEETTSBHH
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCC--CCeEEEEeCCCCceEEcC--CEEEEeCCCcHH
Confidence 4568999999999999999999999999999999999998755322 248999999999998873 699999999999
Q ss_pred HHHHHHHHcCCc-ccccCCCCCccccccccccCcCCCcccccc-ccccceeEEEEEeeCCeEeecccCChhhhhhhhccC
Q 009727 149 ELYYALAMKSLV-HGFPAGLCPTVGIGGHLGGGGFGTLLRKYG-LAADQVVDAYLIDVNGRILDRRAMGEDLFWAIRGGG 226 (527)
Q Consensus 149 ~l~~~l~~~g~~-~~~~~g~~~~vgigG~~~ggg~g~~~~~~G-~~~D~v~~~~vV~~~G~i~~~~~~~~dL~~a~rG~~ 226 (527)
+|++++.++|+. +....+... +|||.+.+ +++.|| .++|+|++++||++||++++... .|++|+||.+.
T Consensus 121 ~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~-----naggyG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~~~ 191 (326)
T 1hsk_A 121 DVSRVARDYALTGLEFACGIPG--SIGGAVYM-----NAGAYGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRNSI 191 (326)
T ss_dssp HHHHHHHHTTEESCGGGTTCCS--BHHHHHHH-----TCEETTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTBCH
T ss_pred HHHHHHHHCCCccccccCCCcc--hhhHHHhc-----ccccCchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCccccc
Confidence 999999999851 111111111 35555544 334488 99999999999999999988433 48899999742
Q ss_pred ---CCceEEEEEEEEEEEec
Q 009727 227 ---GSSFGIILSWKIKLVRV 243 (527)
Q Consensus 227 ---~g~~GIVt~~~lkl~p~ 243 (527)
.| ||||+++||++|.
T Consensus 192 l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 192 IQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp HHHTT--CEEEEEEEECEEC
T ss_pred cCCCC--EEEEEEEEEEEcC
Confidence 23 9999999999998
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.88 E-value=4.7e-23 Score=202.49 Aligned_cols=152 Identities=22% Similarity=0.184 Sum_probs=131.1
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccccCCC-eEEEEcCCCCCeEEcCCCCEEEEcCCCCHH
Q 009727 70 TPKPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLCRTP-FIIIDLINMRSIEINLEDETAWVQSGANLG 148 (527)
Q Consensus 70 ~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~-gvvIdl~~~~~i~~d~~~~~v~v~~G~~~~ 148 (527)
...|. +++|+|++||+++| ++|+.++|+|||+.+. +.+.+ |++|+|++|++|++|. +|+||++|.
T Consensus 20 gg~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~--d~~~~~GvVI~l~~~~~I~vd~-----~v~aG~~~~ 85 (268)
T 2gqt_A 20 GGPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVL--DEGVPERVIRLAGEFQTYDLKG-----WVGAGTLLP 85 (268)
T ss_dssp CCEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEEC--TTCCSSEEEEECGGGGCBCTTS-----EEETTSBHH
T ss_pred CcceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceec--CCCcCCeEEEEcCCCCCcEEcC-----EEECCCCHH
Confidence 34567 99999999999999 8999999999998865 23233 8999999999998762 999999999
Q ss_pred HHHHHHHHcCCcccccCCCCCccccccccccCcCCCcccccc-ccccceeEEEEEeeCCeEeecccCChhhhhhhhccCC
Q 009727 149 ELYYALAMKSLVHGFPAGLCPTVGIGGHLGGGGFGTLLRKYG-LAADQVVDAYLIDVNGRILDRRAMGEDLFWAIRGGGG 227 (527)
Q Consensus 149 ~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G-~~~D~v~~~~vV~~~G~i~~~~~~~~dL~~a~rG~~~ 227 (527)
+|.+++.++|+ .|.++.++|+| +.||+.+++++.|| .++|+|+++|+| +||++++... .|++|+||++..
T Consensus 86 ~l~~~~~~~Gl-----~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~~--~~l~~~YR~s~~ 156 (268)
T 2gqt_A 86 LLVQEAARAGL-----SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYCP--EELGFGYRKSHL 156 (268)
T ss_dssp HHHHHHHHTTE-----ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEECG--GGSCCBTTBCCC
T ss_pred HHHHHHHHcCC-----cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEch--HHcccccCCCCc
Confidence 99999999985 58889999998 78999999999999 689999999999 9999998433 699999998742
Q ss_pred CceEEEEEEEEEEEecC
Q 009727 228 SSFGIILSWKIKLVRVP 244 (527)
Q Consensus 228 g~~GIVt~~~lkl~p~~ 244 (527)
..-||||+++||++|.+
T Consensus 157 ~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 157 PPGGIVTRVRLKLKERP 173 (268)
T ss_dssp STTCEEEEEEECCEECC
T ss_pred CCCceEEEEEEEEEeCC
Confidence 11149999999999975
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.79 E-value=2.5e-19 Score=171.05 Aligned_cols=117 Identities=22% Similarity=0.257 Sum_probs=99.8
Q ss_pred eEEcCCCCEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCccccccccccCcCCCccccccccccceeEEEEEeeCCeEe
Q 009727 130 IEINLEDETAWVQSGANLGELYYALAMKSLVHGFPAGLCPTVGIGGHLGGGGFGTLLRKYGLAADQVVDAYLIDVNGRIL 209 (527)
Q Consensus 130 i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~D~v~~~~vV~~~G~i~ 209 (527)
|++|+++++|+||+|+++.+|+++|.++|+.+...+|+++. +|||++.+|++| .+||.. |+|+++|||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 47899999999999999999999999998643333455566 999999999988 899999 9999999999999998
Q ss_pred e-cc-----cCChhhhhhhhccCCCceEEEEEEEEEEEecCceEEEEEE
Q 009727 210 D-RR-----AMGEDLFWAIRGGGGSSFGIILSWKIKLVRVPETVTSFTV 252 (527)
Q Consensus 210 ~-~~-----~~~~dL~~a~rG~~~g~~GIVt~~~lkl~p~~~~~~~~~~ 252 (527)
+ .. ..++||||+++|+ +|+|||||+++||++|.|+....+..
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs-~G~lGIVt~~tlrl~p~~~~~~~~~~ 123 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGS-FGLLGRAEEVVLRLRPGRAQAFLRRP 123 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTC-TTTTCEEEEEEEECEECSEEEEEEEE
T ss_pred EECCccccCCCCcchHHHhccC-CCceEEEEEEEEEEEECCcccEEEEE
Confidence 7 22 2458999999998 79999999999999999886554443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.24 E-value=1.8e-06 Score=85.52 Aligned_cols=155 Identities=16% Similarity=0.123 Sum_probs=99.3
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCC-ccccCCCeEEEEcCC---CCCeEEcCCCCEEEEcCCCCH
Q 009727 72 KPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGL-SYLCRTPFIIIDLIN---MRSIEINLEDETAWVQSGANL 147 (527)
Q Consensus 72 ~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~-s~~~~~~gvvIdl~~---~~~i~~d~~~~~v~v~~G~~~ 147 (527)
.|-.+++|+|.+|+.++++. ++.+..+.|||++.... .......+++||+++ |+.|+.+ ++.+++|+|+++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~---~~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~tl 78 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQ---LGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMTVE 78 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTCBH
T ss_pred CcceEECCCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 44568999999999999865 34679999999996431 001122479999985 6777664 447999999999
Q ss_pred HHHHHH-HHHcCCc-cc--cc-CCCC---CccccccccccCcCCCcccccccccccee-------EEEEEeeCCeEeecc
Q 009727 148 GELYYA-LAMKSLV-HG--FP-AGLC---PTVGIGGHLGGGGFGTLLRKYGLAADQVV-------DAYLIDVNGRILDRR 212 (527)
Q Consensus 148 ~~l~~~-l~~~g~~-~~--~~-~g~~---~~vgigG~~~ggg~g~~~~~~G~~~D~v~-------~~~vV~~~G~i~~~~ 212 (527)
.+|.+. +.++++. +. +. .+.. ...+|||.+..+.. ..|.+. .+++..++|. .+..
T Consensus 79 ~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G~-r~i~ 148 (287)
T 1ffv_C 79 NDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNGR-RTVP 148 (287)
T ss_dssp HHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTEE-EEEE
T ss_pred HHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCce-EEEE
Confidence 999962 3333321 11 11 1111 13568887766531 345544 5888899993 3322
Q ss_pred cCChhhhhhhhccCCCceEEEEEEEEEEEec
Q 009727 213 AMGEDLFWAIRGGGGSSFGIILSWKIKLVRV 243 (527)
Q Consensus 213 ~~~~dL~~a~rG~~~g~~GIVt~~~lkl~p~ 243 (527)
. .|+|+.+|-.....=-|||+++|.+.+.
T Consensus 149 ~--~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 149 A--DGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp S--TTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred H--HHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 2 6888888732122225999999987653
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.53 E-value=0.00016 Score=71.48 Aligned_cols=154 Identities=18% Similarity=0.076 Sum_probs=94.0
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCC-ccccCCCeEEEEcCC---CCCeEEcCCCCEEEEcCCCCH
Q 009727 72 KPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGL-SYLCRTPFIIIDLIN---MRSIEINLEDETAWVQSGANL 147 (527)
Q Consensus 72 ~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~-s~~~~~~gvvIdl~~---~~~i~~d~~~~~v~v~~G~~~ 147 (527)
.+-.+++|+|.+|+.++++. ++-+..+.+|||+.... ........++||+++ |+.|+. +++.+++|+++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~---~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~~t~ 78 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTK---LGEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIRE--EGTDVVIGAMTTQ 78 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEE--ETTEEEEETTCBH
T ss_pred CceEEECcCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEe--cCCEEEEccCCcH
Confidence 34568899999999998853 24568999999995421 101123479999986 456655 4557999999999
Q ss_pred HHHHH--HHHHcCCccc--ccCCCCC----ccccccccccCcCCCcccccccccccee-------EEEEEeeCCeEeecc
Q 009727 148 GELYY--ALAMKSLVHG--FPAGLCP----TVGIGGHLGGGGFGTLLRKYGLAADQVV-------DAYLIDVNGRILDRR 212 (527)
Q Consensus 148 ~~l~~--~l~~~g~~~~--~~~g~~~----~vgigG~~~ggg~g~~~~~~G~~~D~v~-------~~~vV~~~G~i~~~~ 212 (527)
.++.+ .+.++-..+. +..-..+ ..+|||.+..+. ...|.+. .+++..++|+ .+..
T Consensus 79 ~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~-r~v~ 148 (288)
T 1n62_C 79 HALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA-RIVA 148 (288)
T ss_dssp HHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE-EEEE
T ss_pred HHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc-EEEE
Confidence 99984 4443211111 1111112 347888887652 2455543 5677778884 2221
Q ss_pred cCChhhhhhhhccCCCceEEEEEEEEEEEe
Q 009727 213 AMGEDLFWAIRGGGGSSFGIILSWKIKLVR 242 (527)
Q Consensus 213 ~~~~dL~~a~rG~~~g~~GIVt~~~lkl~p 242 (527)
- .|+|..++-.....=-|||++.|...+
T Consensus 149 ~--~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 149 A--RDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp H--HHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred H--HHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 1 567766552111122589999987654
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.30 E-value=0.00015 Score=76.24 Aligned_cols=151 Identities=14% Similarity=0.073 Sum_probs=96.8
Q ss_pred EEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccc-cCCCeEEEEcCC---CCCeEEcCCCCEEEEcCCCCHHHH
Q 009727 75 LIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYL-CRTPFIIIDLIN---MRSIEINLEDETAWVQSGANLGEL 150 (527)
Q Consensus 75 ~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~-~~~~gvvIdl~~---~~~i~~d~~~~~v~v~~G~~~~~l 150 (527)
.+++|+|.+|+.++++.. . +..+.+||++....-.. ....+++||+++ |+.|+.+ ++.+++|+++++.+|
T Consensus 179 ~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~l 252 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAAL 252 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHHH
T ss_pred EEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHHH
Confidence 357999999999988642 2 57889999997632111 113478999988 6777664 446999999999999
Q ss_pred HHHHHHcCCcccc----cCCCC----CccccccccccCcCCCcccccccccccee----EEEEEeeCCeEeecccCChhh
Q 009727 151 YYALAMKSLVHGF----PAGLC----PTVGIGGHLGGGGFGTLLRKYGLAADQVV----DAYLIDVNGRILDRRAMGEDL 218 (527)
Q Consensus 151 ~~~l~~~g~~~~~----~~g~~----~~vgigG~~~ggg~g~~~~~~G~~~D~v~----~~~vV~~~G~i~~~~~~~~dL 218 (527)
.+.+. +.+. .+ ..... ...+|||.+..+..+ +-...-++ .+++..++|+ .+.. -.|+
T Consensus 253 ~~~l~-~~~p-~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~------sD~~~~L~ALdA~v~l~~~~G~-R~vp--~~dF 321 (462)
T 2w3s_A 253 RAFAE-GPHP-ALAGLLRRFASEQVRQVATIGGNIANGSPI------GDGPPALIAMGASLTLRRGQER-RRMP--LEDF 321 (462)
T ss_dssp HHHHT-TTCH-HHHHHHTTSSCHHHHTTCBHHHHHHHTCTT------CSHHHHHHHTTCEEEEEBTTBC-CCCB--GGGG
T ss_pred HHHHH-HHhH-HHHHHHHHhCChhheeeEEcccccccCCCc------chHHHHHHHcCCEEEEEeCCce-EEEE--HHHh
Confidence 98743 3321 11 11112 225788888776532 44445555 7788888883 2222 2678
Q ss_pred hhhhhccCCCceEEEEEEEEEEEe
Q 009727 219 FWAIRGGGGSSFGIILSWKIKLVR 242 (527)
Q Consensus 219 ~~a~rG~~~g~~GIVt~~~lkl~p 242 (527)
|..+|-.....=-|||+++|...+
T Consensus 322 ~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 322 FLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp EEETTEESCCTTCEEEEEEEESCC
T ss_pred hcccccccCCCCcEEEEEEEecCC
Confidence 877762211112599999887654
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.57 E-value=0.0031 Score=62.13 Aligned_cols=152 Identities=15% Similarity=0.080 Sum_probs=89.1
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCc-cccCCCeEEEEcCCC---CCeEEcCCCCEEEEcCCCCH
Q 009727 72 KPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLS-YLCRTPFIIIDLINM---RSIEINLEDETAWVQSGANL 147 (527)
Q Consensus 72 ~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s-~~~~~~gvvIdl~~~---~~i~~d~~~~~v~v~~G~~~ 147 (527)
.|--+++|+|.+|..++++. +-...+.+|||+....- ........+||++++ +.|+. +++.+++|+++++
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 77 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQ--SAGILSVGAMVTH 77 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEE--ETTEEEEETTCBH
T ss_pred CCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEE--cCCEEEEcCCCcH
Confidence 44568899999999998753 23467889999953210 011123689999985 45554 4568999999999
Q ss_pred HHHHH--HHHHcCCccc--ccC-CC---CCccccccccccCcCCCcccccccccccee-------EEEEEeeCCeEeecc
Q 009727 148 GELYY--ALAMKSLVHG--FPA-GL---CPTVGIGGHLGGGGFGTLLRKYGLAADQVV-------DAYLIDVNGRILDRR 212 (527)
Q Consensus 148 ~~l~~--~l~~~g~~~~--~~~-g~---~~~vgigG~~~ggg~g~~~~~~G~~~D~v~-------~~~vV~~~G~i~~~~ 212 (527)
.++.+ .+.++-..+. +.. |+ -+..+|||.+..+- ...|... .+++..++|+-...
T Consensus 78 ~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R~vp- 147 (288)
T 1t3q_C 78 FRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVRSVS- 147 (288)
T ss_dssp HHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEEEEE-
T ss_pred HHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceEEEE-
Confidence 99986 4433211111 111 11 13347888876431 2356554 66777788852221
Q ss_pred cCChhhhhhhhccCCCceEEEEEEEEEEE
Q 009727 213 AMGEDLFWAIRGGGGSSFGIILSWKIKLV 241 (527)
Q Consensus 213 ~~~~dL~~a~rG~~~g~~GIVt~~~lkl~ 241 (527)
- .|+|..++--....=-|||++.|...
T Consensus 148 ~--~dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 148 A--TDFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp H--HHHEEETTEESCCTTCEEEEEEEECC
T ss_pred H--HHHhcCcccccCCCCCEEEEEEecCC
Confidence 1 45555443110111258999887543
No 33
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.48 E-value=0.0057 Score=60.78 Aligned_cols=153 Identities=13% Similarity=0.042 Sum_probs=89.4
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcc-ccCCCeEEEEcCCCCCe-EEcCCCCEEEEcCCCCHHH
Q 009727 72 KPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSY-LCRTPFIIIDLINMRSI-EINLEDETAWVQSGANLGE 149 (527)
Q Consensus 72 ~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~-~~~~~gvvIdl~~~~~i-~~d~~~~~v~v~~G~~~~~ 149 (527)
.+..+++|+|.+|..++++. +. ...+.+||++....-. .......+||++++..+ .|..+++.+++|+++++.+
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~ 84 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSS 84 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHHH
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEECCCeEEEccCCcHHH
Confidence 45568999999999887643 22 3588899999652210 11123689999975433 2333456899999999999
Q ss_pred HHHHHHHc----C------C-ccc--ccCCC----CCccccccccccCcCCCccccccccccce---e----EEEEEeeC
Q 009727 150 LYYALAMK----S------L-VHG--FPAGL----CPTVGIGGHLGGGGFGTLLRKYGLAADQV---V----DAYLIDVN 205 (527)
Q Consensus 150 l~~~l~~~----g------~-~~~--~~~g~----~~~vgigG~~~ggg~g~~~~~~G~~~D~v---~----~~~vV~~~ 205 (527)
+.+.+.++ . . .+. +..-. -+..+|||.+..+.. ..|.. + .+++..++
T Consensus 85 l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p---------~sD~~~~L~AldA~v~l~~~~ 155 (305)
T 3nvz_B 85 VEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP---------ISDLNPVFMASGTKLTIVSRG 155 (305)
T ss_dssp HHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT---------TCSSHHHHHHHTCEEEEEETT
T ss_pred HHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC---------chHHHHHHHHcCCEEEEEcCC
Confidence 98876532 0 0 000 11111 124578888766532 23332 2 46677778
Q ss_pred CeEeecccCChhhhhhhhccCCCce---EEEEEEEEEEEe
Q 009727 206 GRILDRRAMGEDLFWAIRGGGGSSF---GIILSWKIKLVR 242 (527)
Q Consensus 206 G~i~~~~~~~~dL~~a~rG~~~g~~---GIVt~~~lkl~p 242 (527)
|+-... - ..|+|-+++ ...+ -|||++.+...+
T Consensus 156 G~R~vp-~-~~df~~g~~---~t~l~~~Eil~~I~iP~~~ 190 (305)
T 3nvz_B 156 TRRTVP-M-DHTFFPSYR---KTLLGPEEILLSIEIPYSR 190 (305)
T ss_dssp EEEEEE-C-CGGGCCSTT---CCSCCTTCEEEEEEEECCC
T ss_pred CcEEEE-e-ehHhhcCcc---cccCCCCcEEEEEEecCCC
Confidence 842221 1 125665554 2222 499998875433
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=93.51 E-value=0.082 Score=52.12 Aligned_cols=77 Identities=14% Similarity=0.190 Sum_probs=52.8
Q ss_pred ccEEEecCCHHHHHHHHHHHHhCCC-cEEEEcCCCCCCCCc-cccCCCeEEEEcCCCCCe-EEcCCCCEEEEcCCCCHHH
Q 009727 73 PLLIITPFHESEIQAAVFCSKNHDL-QIRVRSGGHDYEGLS-YLCRTPFIIIDLINMRSI-EINLEDETAWVQSGANLGE 149 (527)
Q Consensus 73 p~~vv~P~s~~dV~~~v~~a~~~~~-~~~v~ggGh~~~g~s-~~~~~~gvvIdl~~~~~i-~~d~~~~~v~v~~G~~~~~ 149 (527)
|--+++|+|.+|..+++. +++- ...+.+||++....- ........+||++++..+ .|..+++.+++|+++++.+
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~ 79 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFTQ 79 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHHH
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHHH
Confidence 345789999999887763 3433 467889999964211 011124689999986543 3334567899999999999
Q ss_pred HHH
Q 009727 150 LYY 152 (527)
Q Consensus 150 l~~ 152 (527)
+.+
T Consensus 80 l~~ 82 (296)
T 3hrd_C 80 IEN 82 (296)
T ss_dssp HHH
T ss_pred HHh
Confidence 974
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=88.98 E-value=0.41 Score=47.64 Aligned_cols=76 Identities=16% Similarity=0.107 Sum_probs=52.6
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCC-ccccCCCeEEEEcCCC---CCeEEcCCCCEEEEcCCCCH
Q 009727 72 KPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGL-SYLCRTPFIIIDLINM---RSIEINLEDETAWVQSGANL 147 (527)
Q Consensus 72 ~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~-s~~~~~~gvvIdl~~~---~~i~~d~~~~~v~v~~G~~~ 147 (527)
.|--+++|+|.+|..+++. + -.-.+.+||+++... .........+||++++ +.|+.++ ++.++||+++++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~---~--~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~-~~~l~IGA~vt~ 78 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA---A--EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLA-DGSLRIGAGATL 78 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT---S--TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECT-TSCEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHh---C--CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECC-CCeEEEccCCcH
Confidence 3445889999999988775 2 247888999986421 0011223689999876 5555443 346999999999
Q ss_pred HHHHHH
Q 009727 148 GELYYA 153 (527)
Q Consensus 148 ~~l~~~ 153 (527)
.+|.+.
T Consensus 79 ~~l~~~ 84 (324)
T 1rm6_B 79 EAIAEH 84 (324)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 999764
No 36
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=83.27 E-value=1.6 Score=46.40 Aligned_cols=28 Identities=21% Similarity=0.194 Sum_probs=22.4
Q ss_pred hHhhhhcccH-HHHHHHHhccCCCCCccc
Q 009727 487 WGIKYFKSNF-KRLALVKSKVDPGNFFRN 514 (527)
Q Consensus 487 w~~~yyg~n~-~RL~~IK~kyDP~~vF~~ 514 (527)
|...+||+.. +-+++||+.+||+|+|+-
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNP 509 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAP 509 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCT
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCC
Confidence 4477888765 555999999999999964
No 37
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=76.66 E-value=2.2 Score=50.40 Aligned_cols=80 Identities=11% Similarity=-0.012 Sum_probs=54.1
Q ss_pred CccEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcc-ccCCCeEEEEcCCCCCe-EEcCCCCEEEEcCCCCHHH
Q 009727 72 KPLLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSY-LCRTPFIIIDLINMRSI-EINLEDETAWVQSGANLGE 149 (527)
Q Consensus 72 ~p~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~-~~~~~gvvIdl~~~~~i-~~d~~~~~v~v~~G~~~~~ 149 (527)
.+...++|.|.+|+.+++.. + -.-.+.+||++..-.-. .......+||++++..+ .|..++..++||+++++.+
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~---~-~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~~ 307 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ---H-PEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSS 307 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH---C-TTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHHH
T ss_pred CceEEEccCCHHHHHHHHhh---C-CCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChHHH
Confidence 34568999999999887643 2 12467789988542110 11123589999986543 3333456799999999999
Q ss_pred HHHHHH
Q 009727 150 LYYALA 155 (527)
Q Consensus 150 l~~~l~ 155 (527)
|.+.+.
T Consensus 308 l~~~l~ 313 (1332)
T 3unc_A 308 VEKTLL 313 (1332)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 38
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=56.25 E-value=3.8 Score=43.85 Aligned_cols=23 Identities=22% Similarity=0.361 Sum_probs=21.1
Q ss_pred ccHHHHHHHHhccCCCCCcccCC
Q 009727 494 SNFKRLALVKSKVDPGNFFRNEQ 516 (527)
Q Consensus 494 ~n~~RL~~IK~kyDP~~vF~~~~ 516 (527)
+++++.+++++++||+++|.++.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~~ 555 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNGF 555 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCHH
T ss_pred CCHHHHHHHHHhcCCCCccCCHH
Confidence 89999999999999999998753
No 39
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=53.64 E-value=17 Score=38.91 Aligned_cols=29 Identities=17% Similarity=0.397 Sum_probs=18.3
Q ss_pred hhhHhhhhcc-cHHHHHHHHhccCCCCCcc
Q 009727 485 AAWGIKYFKS-NFKRLALVKSKVDPGNFFR 513 (527)
Q Consensus 485 ~~w~~~yyg~-n~~RL~~IK~kyDP~~vF~ 513 (527)
..|....+|+ .++-+++||+.+||+|+|+
T Consensus 550 ~~~l~~~~g~~~~~lmr~iK~a~DP~gIlN 579 (584)
T 2uuu_A 550 VPWMTRYATRGWINVYRSLKETIDPKDICN 579 (584)
T ss_dssp ---------CTHHHHHHHHHHHHCTTCCBS
T ss_pred HHHHHHhcCHHHHHHHHHHHHHcCCCcCCC
Confidence 3455556665 6899999999999999995
No 40
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=51.51 E-value=7.4 Score=41.68 Aligned_cols=28 Identities=18% Similarity=0.076 Sum_probs=19.9
Q ss_pred hcccHHHHHHHHhccCCCCCcccCCCCCCc
Q 009727 492 FKSNFKRLALVKSKVDPGNFFRNEQSIPPF 521 (527)
Q Consensus 492 yg~n~~RL~~IK~kyDP~~vF~~~~~i~~~ 521 (527)
|++... |++||+.+||+|+|+ |--|..+
T Consensus 535 ~~~~~~-m~~iK~~~DP~~ilN-PGk~~t~ 562 (571)
T 1f0x_A 535 YKAPET-LQKFYRENDPTNSMN-PGIGKTS 562 (571)
T ss_dssp SCCCHH-HHHHHHHHCTTCCBS-TTTTTCC
T ss_pred cCCHHH-HHHHHHHhCCCCCCC-CCcCcCC
Confidence 344444 999999999999995 4444333
No 41
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=48.84 E-value=21 Score=38.00 Aligned_cols=21 Identities=24% Similarity=0.349 Sum_probs=18.3
Q ss_pred ccHHHHHHHHhccCCCCCccc
Q 009727 494 SNFKRLALVKSKVDPGNFFRN 514 (527)
Q Consensus 494 ~n~~RL~~IK~kyDP~~vF~~ 514 (527)
..++-+++||+.+||+|+|+-
T Consensus 523 ~~~~lm~~iK~~~DP~gILNP 543 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAP 543 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCT
T ss_pred HHHHHHHHHHHHcCccCCCCC
Confidence 368889999999999999964
No 42
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=46.71 E-value=6.9 Score=41.53 Aligned_cols=23 Identities=17% Similarity=0.300 Sum_probs=21.3
Q ss_pred cccHHHHHHHHhccCCCCCcccC
Q 009727 493 KSNFKRLALVKSKVDPGNFFRNE 515 (527)
Q Consensus 493 g~n~~RL~~IK~kyDP~~vF~~~ 515 (527)
|+++...+++++++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 68999999999999999999874
No 43
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=45.82 E-value=21 Score=29.66 Aligned_cols=41 Identities=17% Similarity=0.292 Sum_probs=34.1
Q ss_pred CccCCCCCCccEEEecCCHHHHHHHHHHHHhCCCcE-EEEcCCC
Q 009727 64 RYLNATTPKPLLIITPFHESEIQAAVFCSKNHDLQI-RVRSGGH 106 (527)
Q Consensus 64 r~~~~~~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~-~v~ggGh 106 (527)
+|.. ...|..|+++.+++++.++.+.|++.|+|. .++=.|+
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGK 89 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 5643 368999999999999999999999999996 5656665
No 44
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=38.74 E-value=18 Score=42.75 Aligned_cols=77 Identities=13% Similarity=0.042 Sum_probs=50.1
Q ss_pred EEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC--CCccccCCCeEEEEcCCCCCe-EEcCCCCEEEEcCCCCHHHHH
Q 009727 75 LIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYE--GLSYLCRTPFIIIDLINMRSI-EINLEDETAWVQSGANLGELY 151 (527)
Q Consensus 75 ~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~--g~s~~~~~~gvvIdl~~~~~i-~~d~~~~~v~v~~G~~~~~l~ 151 (527)
..++|.|.+|+.++.. +.-+.+ +..|++... -.. ....-.++|++.+...+ .+..++..+++|++|++.++.
T Consensus 242 ~w~~P~tl~el~~l~~--~~p~a~--lvaGnT~~gl~~~~-~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~ 316 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKM--KHPSAP--LVIGNTYLGLHMKF-TDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVK 316 (1335)
T ss_dssp EEEECSSHHHHHHHHH--HCTTSC--BCSSCTTHHHHHC---CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHH
T ss_pred eEecCCCHHHHHHHHH--HCCCCe--EEEecccceeeEee-cCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHH
Confidence 4689999999988743 222334 344555532 110 11112588999876555 455566789999999999998
Q ss_pred HHHHH
Q 009727 152 YALAM 156 (527)
Q Consensus 152 ~~l~~ 156 (527)
+.|.+
T Consensus 317 ~~l~~ 321 (1335)
T 3zyv_A 317 NVLSD 321 (1335)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 45
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=31.97 E-value=65 Score=26.68 Aligned_cols=37 Identities=14% Similarity=0.109 Sum_probs=32.1
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCcE-EEEcCCC
Q 009727 70 TPKPLLIITPFHESEIQAAVFCSKNHDLQI-RVRSGGH 106 (527)
Q Consensus 70 ~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~-~v~ggGh 106 (527)
...|..|+++.+++++.++.+.|.+.|+|. .++-.|+
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 90 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGL 90 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 368999999999999999999999999996 5656666
No 46
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=27.69 E-value=82 Score=26.21 Aligned_cols=37 Identities=11% Similarity=0.081 Sum_probs=32.1
Q ss_pred CCccEEEecCCHHHHHHHHHHHHhCCCcE-EEEcCCCC
Q 009727 71 PKPLLIITPFHESEIQAAVFCSKNHDLQI-RVRSGGHD 107 (527)
Q Consensus 71 ~~p~~vv~P~s~~dV~~~v~~a~~~~~~~-~v~ggGh~ 107 (527)
..+..|+++.|++++.++.+.|++.|+|. .|+-.|+.
T Consensus 47 G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 47 GQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp CSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 57899999999999999999999999996 56666764
No 47
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=27.54 E-value=67 Score=26.39 Aligned_cols=38 Identities=11% Similarity=0.049 Sum_probs=32.1
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCcE-EEEcCCCC
Q 009727 70 TPKPLLIITPFHESEIQAAVFCSKNHDLQI-RVRSGGHD 107 (527)
Q Consensus 70 ~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~-~v~ggGh~ 107 (527)
...|..|+++.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 49 ~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 49 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 368999999999999999999999999996 55556653
No 48
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=27.20 E-value=65 Score=26.38 Aligned_cols=37 Identities=16% Similarity=0.246 Sum_probs=30.8
Q ss_pred CCCccEEEecCCHHHHHHHHHHHHhCCCcE-EEEcCCC
Q 009727 70 TPKPLLIITPFHESEIQAAVFCSKNHDLQI-RVRSGGH 106 (527)
Q Consensus 70 ~~~p~~vv~P~s~~dV~~~v~~a~~~~~~~-~v~ggGh 106 (527)
...|..|+++.+++++.++.+.|++.|+|. .++-.|+
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 468999999999999999999999999986 4555554
No 49
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=23.73 E-value=85 Score=24.43 Aligned_cols=34 Identities=9% Similarity=0.100 Sum_probs=27.3
Q ss_pred cEEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCccccCCCeEEEEcCCCCC
Q 009727 74 LLIITPFHESEIQAAVFCSKNHDLQIRVRSGGHDYEGLSYLCRTPFIIIDLINMRS 129 (527)
Q Consensus 74 ~~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~~~g~s~~~~~~gvvIdl~~~~~ 129 (527)
-.++.|++-+|.++++...++.. .|+|||.+|+.
T Consensus 7 Ivv~~P~sy~Da~~I~d~Lr~~~----------------------~VvvNL~~ld~ 40 (87)
T 3p04_A 7 IVPVELHSFEDAQVIGGAFRDGD----------------------AVVFDMSLLSR 40 (87)
T ss_dssp CEEEECSSGGGHHHHHHHHHTTC----------------------CEEEECTTSCH
T ss_pred EEEEecCcHHHHHHHHHHHHCCC----------------------EEEEECCCCCH
Confidence 46899999999999998776521 58888888764
No 50
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=23.31 E-value=1.2e+02 Score=24.90 Aligned_cols=36 Identities=17% Similarity=0.302 Sum_probs=30.8
Q ss_pred CCccEEEecCCHHHHHHHHHHHHhCCCcE-EEEcCCC
Q 009727 71 PKPLLIITPFHESEIQAAVFCSKNHDLQI-RVRSGGH 106 (527)
Q Consensus 71 ~~p~~vv~P~s~~dV~~~v~~a~~~~~~~-~v~ggGh 106 (527)
..|..|++..+++++.++.+.|.+.|+|. .++=.|+
T Consensus 50 g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 50 GQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 46999999999999999999999999995 5555555
No 51
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=22.05 E-value=94 Score=23.64 Aligned_cols=33 Identities=18% Similarity=0.195 Sum_probs=28.2
Q ss_pred EEEecCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q 009727 75 LIITPFHESEIQAAVFCSKNHDLQIRVRSGGHD 107 (527)
Q Consensus 75 ~vv~P~s~~dV~~~v~~a~~~~~~~~v~ggGh~ 107 (527)
++-...|.+||.++++-.+.+|.|+++.-.|-+
T Consensus 30 yirtatssqdirdiiksmkdngkplvvfvngas 62 (112)
T 2lnd_A 30 YIRTATSSQDIRDIIKSMKDNGKPLVVFVNGAS 62 (112)
T ss_dssp TEEEECSHHHHHHHHHHHTTCCSCEEEEECSCC
T ss_pred eeeeccchhhHHHHHHHHHhcCCeEEEEecCcc
Confidence 366778999999999999999999988777654
No 52
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=21.52 E-value=55 Score=32.67 Aligned_cols=28 Identities=11% Similarity=0.132 Sum_probs=23.5
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEE--cCCCC
Q 009727 80 FHESEIQAAVFCSKNHDLQIRVR--SGGHD 107 (527)
Q Consensus 80 ~s~~dV~~~v~~a~~~~~~~~v~--ggGh~ 107 (527)
=|.+|++++|++|+++||.|.|- .=||.
T Consensus 92 YT~~di~eiv~YA~~rgI~VIPEID~PGH~ 121 (367)
T 1yht_A 92 LSYRQLDDIKAYAKAKGIELIPELDSPNHM 121 (367)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEESSSC
T ss_pred cCHHHHHHHHHHHHHcCCEEEEeccchHHH
Confidence 48899999999999999999764 34665
Done!