Your job contains 1 sequence.
>009729
MQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGK
LGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGS
GKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTLHASAFKSSDSDSR
KKFPSKSCPLRYGTAKIQEDTFNLFQAGLREFLGSFGVKTQGSHYSGWRITALSVSASKI
VPVLSGTCSIMKYFNGPDKFGSTSEQLPDNFIDAAPLSPSGSESYSTLNSTELQNELPGE
QVWIEHSMADLGQLEMKANTWNGLDPSCSISKQTSGTESSSSLDQNKPQNRDDSRMRSVP
IKSNQQEHKKSALKDKGASSILNFFKSGDLSCSSGNHDTEHAETLLPLGDCLSESNKKQV
NIPKERLDNSTGDCLSESNQNQVNIPKERLAEAATTSTSTDRCGSDQIQQRSESWKLRIE
EIDPSVIDELPKEIQDEIQAWLRPSKRPHRVKQGFTIADYFSPSKNR
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009729
(527 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2156309 - symbol:POLH "Y-family DNA polymerase... 1010 1.3e-111 2
ZFIN|ZDB-GENE-060421-4949 - symbol:polh "polymerase (DNA ... 446 1.7e-41 1
UNIPROTKB|E2RC81 - symbol:POLH "Uncharacterized protein" ... 407 6.3e-39 2
UNIPROTKB|F1NCM3 - symbol:POLH "Uncharacterized protein" ... 418 1.0e-38 1
UNIPROTKB|F1NAG6 - symbol:POLH "Uncharacterized protein" ... 418 1.3e-38 1
RGD|1309893 - symbol:Polh "polymerase (DNA directed), eta... 410 1.1e-37 1
MGI|MGI:1891457 - symbol:Polh "polymerase (DNA directed),... 407 2.3e-37 1
UNIPROTKB|B4DG64 - symbol:POLH "DNA polymerase eta" speci... 403 4.5e-37 1
UNIPROTKB|Q9Y253 - symbol:POLH "DNA polymerase eta" speci... 403 7.2e-37 1
UNIPROTKB|F1MZ79 - symbol:POLH "Uncharacterized protein" ... 386 1.7e-36 2
UNIPROTKB|F1RRJ6 - symbol:POLH "Uncharacterized protein" ... 384 2.5e-36 2
FB|FBgn0037141 - symbol:DNApol-eta "DNApol-eta" species:7... 393 1.8e-35 1
WB|WBGene00018721 - symbol:polh-1 species:6239 "Caenorhab... 298 9.5e-24 1
UNIPROTKB|G5EH81 - symbol:MGCH7_ch7g688 "Sister chromatid... 254 1.3e-18 1
ASPGD|ASPL0000072145 - symbol:AN4678 species:162425 "Emer... 252 2.2e-18 1
POMBASE|SPBC16A3.11 - symbol:eso1 "sister chromatid cohes... 227 2.0e-15 1
CGD|CAL0002818 - symbol:RAD32 species:5476 "Candida albic... 201 9.0e-13 1
TAIR|locus:2156319 - symbol:REV1 species:3702 "Arabidopsi... 194 7.5e-12 2
UNIPROTKB|F1PDA5 - symbol:POLI "Uncharacterized protein" ... 163 1.4e-11 3
UNIPROTKB|Q47155 - symbol:dinB species:83333 "Escherichia... 184 1.7e-11 1
TIGR_CMR|CHY_1651 - symbol:CHY_1651 "DNA polymerase IV - ... 175 2.5e-10 1
RGD|1305212 - symbol:Poli "polymerase (DNA directed), iot... 144 2.9e-10 2
UNIPROTKB|Q83EN5 - symbol:dinP "DNA polymerase IV" specie... 173 3.7e-10 1
TIGR_CMR|CBU_0280 - symbol:CBU_0280 "DNA-damage-inducible... 173 3.7e-10 1
ZFIN|ZDB-GENE-050417-376 - symbol:poli "polymerase (DNA d... 163 8.6e-10 2
ASPGD|ASPL0000012133 - symbol:AN3909 species:162425 "Emer... 174 1.6e-09 2
UNIPROTKB|F1MHR0 - symbol:POLI "Uncharacterized protein" ... 151 1.6e-09 2
UNIPROTKB|J3KSW2 - symbol:POLI "DNA polymerase iota" spec... 153 6.2e-09 2
UNIPROTKB|Q9UNA4 - symbol:POLI "DNA polymerase iota" spec... 153 9.4e-09 2
UNIPROTKB|Q74H50 - symbol:dinB "DNA polymerase IV" specie... 156 3.7e-08 1
TIGR_CMR|GSU_0043 - symbol:GSU_0043 "ImpB/MucB/SamB famil... 156 3.7e-08 1
UNIPROTKB|Q8EHU9 - symbol:dinB "DNA polymerase IV" specie... 150 1.2e-07 1
TIGR_CMR|SO_1114 - symbol:SO_1114 "DNA-damage-inducible p... 150 1.2e-07 1
MGI|MGI:1347081 - symbol:Poli "polymerase (DNA directed),... 136 1.8e-07 3
UNIPROTKB|F1NCT7 - symbol:POLK "Uncharacterized protein" ... 151 2.2e-07 1
UNIPROTKB|P63985 - symbol:dinB1 "DNA polymerase IV 1" spe... 150 2.2e-07 1
UNIPROTKB|F1MAB3 - symbol:Polk "Protein Polk" species:101... 152 2.3e-07 2
POMBASE|SPBC1347.01c - symbol:rev1 "deoxycytidyl transfer... 150 2.4e-07 2
UNIPROTKB|E2RAS5 - symbol:POLK "Uncharacterized protein" ... 153 2.6e-07 1
UNIPROTKB|Q71Y46 - symbol:dinB "DNA polymerase IV" specie... 147 2.7e-07 1
UNIPROTKB|P63987 - symbol:dinB2 "DNA polymerase IV 2" spe... 146 3.3e-07 1
UNIPROTKB|Q9KPS5 - symbol:dinB "DNA polymerase IV" specie... 146 3.6e-07 1
TIGR_CMR|VC_2287 - symbol:VC_2287 "DNA-damage-inducible p... 146 3.6e-07 1
UNIPROTKB|Q74CQ6 - symbol:dinB "DNA polymerase IV" specie... 147 3.6e-07 1
TIGR_CMR|GSU_1616 - symbol:GSU_1616 "ImpB/MucB/SamB famil... 147 3.6e-07 1
UNIPROTKB|G3V8W7 - symbol:Polk "Protein Polk" species:101... 152 3.8e-07 2
TAIR|locus:2031050 - symbol:AT1G49980 species:3702 "Arabi... 150 3.8e-07 1
ZFIN|ZDB-GENE-081105-180 - symbol:si:dkey-57a22.7 "si:dke... 149 4.0e-07 2
UNIPROTKB|J9P5L3 - symbol:POLK "Uncharacterized protein" ... 150 5.4e-07 1
FB|FBgn0037554 - symbol:DNApol-iota "DNApol-iota" species... 147 7.1e-07 2
UNIPROTKB|F1STE9 - symbol:REV1 "Uncharacterized protein" ... 137 9.0e-07 2
UNIPROTKB|F1NCT8 - symbol:POLK "Uncharacterized protein" ... 151 1.6e-06 2
UNIPROTKB|Q8AWW1 - symbol:DINB1 "Uncharacterized protein"... 151 1.7e-06 2
UNIPROTKB|Q81M86 - symbol:dinB "DNA polymerase IV" specie... 140 2.2e-06 1
TIGR_CMR|BA_4366 - symbol:BA_4366 "DNA-damage-inducible p... 140 2.2e-06 1
UNIPROTKB|F1S2I2 - symbol:POLK "Uncharacterized protein" ... 150 2.2e-06 2
UNIPROTKB|A6QNV6 - symbol:POLK "Uncharacterized protein" ... 144 2.5e-06 1
MGI|MGI:1349767 - symbol:Polk "polymerase (DNA directed),... 152 3.2e-06 2
UNIPROTKB|Q5Q9G8 - symbol:POLK "Polymerase kappa isoform ... 142 3.5e-06 1
UNIPROTKB|Q9UBT6 - symbol:POLK "DNA polymerase kappa" spe... 142 4.0e-06 1
UNIPROTKB|E2RPL9 - symbol:REV1 "Uncharacterized protein" ... 140 4.6e-06 2
UNIPROTKB|F1N787 - symbol:REV1 "Uncharacterized protein" ... 138 8.5e-06 2
UNIPROTKB|D6RAE5 - symbol:POLK "DNA polymerase kappa" spe... 134 9.3e-06 1
TIGR_CMR|SPO_3280 - symbol:SPO_3280 "DNA polymerase IV, p... 134 1.0e-05 1
UNIPROTKB|Q9UBZ9 - symbol:REV1 "DNA repair protein REV1" ... 137 1.2e-05 2
UNIPROTKB|Q5Q9G5 - symbol:POLK "DNA polymerase kappa" spe... 134 1.2e-05 1
UNIPROTKB|F1P5H4 - symbol:REV1 "DNA repair protein REV1" ... 135 1.2e-05 2
UNIPROTKB|Q4KWZ7 - symbol:REV1 "DNA repair protein REV1" ... 135 1.2e-05 2
UNIPROTKB|Q5Q9G7 - symbol:POLK "DNA polymerase kappa" spe... 134 1.3e-05 1
UNIPROTKB|E9PST4 - symbol:Polk "Protein Polk" species:101... 132 4.3e-05 2
UNIPROTKB|J3KTN3 - symbol:POLI "DNA polymerase iota" spec... 122 4.8e-05 1
ZFIN|ZDB-GENE-060526-137 - symbol:polk "polymerase (DNA d... 132 5.0e-05 1
MGI|MGI:1929074 - symbol:Rev1 "REV1 homolog (S. cerevisia... 130 5.3e-05 2
RGD|1306715 - symbol:Rev1 "REV1, polymerase (DNA directed... 129 5.3e-05 2
FB|FBgn0035150 - symbol:Rev1 "Rev1" species:7227 "Drosoph... 133 6.1e-05 2
TIGR_CMR|CPS_1040 - symbol:CPS_1040 "DNA polymerase IV" s... 125 7.4e-05 1
UNIPROTKB|Q0BZW2 - symbol:dinB "DNA polymerase IV" specie... 125 0.00010 1
ASPGD|ASPL0000039840 - symbol:AN3373 species:162425 "Emer... 126 0.00014 1
POMBASE|SPCC553.07c - symbol:kpa1 "DinB translesion DNA r... 125 0.00015 1
UNIPROTKB|E9PST3 - symbol:Polk "Protein Polk" species:101... 126 0.00020 2
UNIPROTKB|Q81NC2 - symbol:BAS3053 "ImpB/mucB/samB family ... 121 0.00028 1
TIGR_CMR|BA_3288 - symbol:BA_3288 "impB/mucB/samB family ... 121 0.00028 1
>TAIR|locus:2156309 [details] [associations]
symbol:POLH "Y-family DNA polymerase H" species:3702
"Arabidopsis thaliana" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281
"DNA repair" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010224 "response to UV-B" evidence=IMP]
[GO:0042276 "error-prone translesion synthesis" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0042732 "D-xylose metabolic process" evidence=RCA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 EMBL:CP002688
GO:GO:0003684 GO:GO:0010224 GO:GO:0003887 GO:GO:0042276
Gene3D:3.30.1490.100 SUPFAM:SSF100879 HSSP:P96022 KO:K03509
InterPro:IPR017061 PIRSF:PIRSF036603 EMBL:AJ416380 IPI:IPI00537089
RefSeq:NP_568638.2 UniGene:At.19023 SMR:Q8H2D5 IntAct:Q8H2D5
STRING:Q8H2D5 EnsemblPlants:AT5G44740.2 GeneID:834503
KEGG:ath:AT5G44740 TAIR:At5g44740 InParanoid:Q8H2D5 OMA:CPLRYGT
ProtClustDB:CLSN2680435 Genevestigator:Q8H2D5 Uniprot:Q8H2D5
Length = 672
Score = 1010 (360.6 bits), Expect = 1.3e-111, Sum P(2) = 1.3e-111
Identities = 224/425 (52%), Positives = 271/425 (63%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKL 61
QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQT VP+++V+ LL SLPIKKMKQLGGKL
Sbjct: 198 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVVPYAAVQELLSSLPIKKMKQLGGKL 257
Query: 62 GTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSG 121
GTSLQ +LGV TVGDLL+FSE KLQE YG NTGTWLWNIARGISGEEVQ RLLPKSHGSG
Sbjct: 258 GTSLQTDLGVDTVGDLLQFSETKLQEHYGVNTGTWLWNIARGISGEEVQGRLLPKSHGSG 317
Query: 122 KSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTLHXXXXXXXXXXXXX 181
K+FPGPRALK++++VQHWLNQL EELSERL SDLEQNKRIA TLTLH
Sbjct: 318 KTFPGPRALKSLSTVQHWLNQLSEELSERLGSDLEQNKRIASTLTLHASAFRSKDSDSHK 377
Query: 182 XXXXXXCPLRYGTAKIQEDTFNLFQAGLREFLGSFGVKTQGSHYSGWRITALSVSASKIV 241
CP+RYG KIQED FNLFQA LRE++GSFG+K QG+ WRIT LSVSASKIV
Sbjct: 378 KFPSKSCPMRYGVTKIQEDAFNLFQAALREYMGSFGIKPQGNKLETWRITGLSVSASKIV 437
Query: 242 PVLSGTCSIMKYFNGPDKFGSTSEQLPDNFIDA-APLSPSGSESYSTLNSTELQNELPGE 300
+ SGT SIM+YF S S D + ++ S SE S STE Q +P
Sbjct: 438 DIPSGTSSIMRYFQSQPTVPSRSA---DGCVQGNVAMTASASEGCSEQRSTETQAAMPEV 494
Query: 301 QVWIEHSMADLGQLEMKANTWNGLDP-SCXXXXXXXXXXXXXXLDQNKPQNRDDSRMRSV 359
+ +++ + + + + D SC + NK ++ + +
Sbjct: 495 DTGVTYTLPNFENQDKDIDLVSEKDVVSCPSNEATDVSTQS---ESNK-----GTQTKKI 546
Query: 360 PIKSNQQEHKKSALKDKGASSILNFFKSGDLSCSSGNHDTEHAETLLPLGD---CLSESN 416
K N + K ++G SI++ FK+ + + S +T+ T+ S S+
Sbjct: 547 GRKMNNSKEK-----NRGMPSIVDIFKNYNATPPS-KQETQEDSTVSSASKRAKLSSSSH 600
Query: 417 KKQVN 421
QVN
Sbjct: 601 NSQVN 605
Score = 112 (44.5 bits), Expect = 1.3e-111, Sum P(2) = 1.3e-111
Identities = 31/100 (31%), Positives = 54/100 (54%)
Query: 429 NSTGDCLSESNQNQVNIPKERLAEAATTSTSTDRCGSDQIQQRSESWKLRIEEIDPSVID 488
N+T E+ ++ + A+ +++S ++ + + + R W + +EID SV D
Sbjct: 571 NATPPSKQETQEDSTVSSASKRAKLSSSSHNS-QVNQEVEESRETDWGYKTDEIDQSVFD 629
Query: 489 ELPKEIQDEIQAWLRPSKRPHRVKQ---GFT--IADYFSP 523
ELP EIQ E++++LR +K+ + K G T IA YF P
Sbjct: 630 ELPVEIQRELRSFLRTNKQFNTGKSKGDGSTSSIAHYFPP 669
>ZFIN|ZDB-GENE-060421-4949 [details] [associations]
symbol:polh "polymerase (DNA directed), eta"
species:7955 "Danio rerio" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 ZFIN:ZDB-GENE-060421-4949 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:AL929536 IPI:IPI00758987 Ensembl:ENSDART00000139589
OMA:MKSLEKH ArrayExpress:F1Q7Z9 Bgee:F1Q7Z9 Uniprot:F1Q7Z9
Length = 749
Score = 446 (162.1 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 105/266 (39%), Positives = 146/266 (54%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
V + T F CSAGI+HNK+LAKLA G+NKP +QT +P SSV L +LPI K++ LGGKLG
Sbjct: 203 VEEHTGFRCSAGISHNKVLAKLACGLNKPNRQTVLPLSSVPQLFSTLPISKIRNLGGKLG 262
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
+S+ L V +GDL +FS +L++ +G TG WL+++ RGI E V+ R LPKS G K
Sbjct: 263 SSITETLSVENMGDLTRFSRAQLEQHFGDKTGPWLYDLCRGIEFEPVKPRQLPKSIGCSK 322
Query: 123 SFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTLHXXXXXXXXXXXXXX 182
+F G L+T VQ+WL+QL EL ERL D + N R+A LT+
Sbjct: 323 NFAGKTCLRTKQQVQYWLHQLALELEERLNKDRDVNGRVARQLTV----GVRQAGGQRSG 378
Query: 183 XXXXXCPL-RYGTAKIQEDTFNLFQAGLREFLGSFGVKTQGSHYSGWR--ITALSVSASK 239
C L RY K+ D+ + ++ + T G+H W +T L +SASK
Sbjct: 379 SFSRCCALVRYDAMKMTNDSLTIIKS----------LNTAGAHQEAWSPALTLLHLSASK 428
Query: 240 IVPVLSGTCSIMKYFNGPDKFGSTSE 265
S + + + F D S S+
Sbjct: 429 FSDAPSSSSAGITGFLSSDAASSPSQ 454
>UNIPROTKB|E2RC81 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0006301 "postreplication repair" evidence=IEA] [GO:0006290
"pyrimidine dimer repair" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005634 GO:GO:0005737 GO:GO:0003684
GO:GO:0010225 GO:GO:0000731 GO:GO:0006301 GO:GO:0003887
GO:GO:0006290 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 OMA:SPPLTML InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:AAEX03008345 RefSeq:XP_532150.2
Ensembl:ENSCAFT00000003028 GeneID:474915 KEGG:cfa:474915
NextBio:20850851 Uniprot:E2RC81
Length = 712
Score = 407 (148.3 bits), Expect = 6.3e-39, Sum P(2) = 6.3e-39
Identities = 100/261 (38%), Positives = 137/261 (52%)
Query: 5 KETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLGTS 64
+ET F CSAGI+HNK+LAKLA G+NKP +QT V SV L +PI K++ LGGKLG S
Sbjct: 206 RETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPISKIRSLGGKLGAS 265
Query: 65 LQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSF 124
+ LGV +G+L +F+E +LQ +G G+WL+ + RGI + V+ R LPK+ G K+F
Sbjct: 266 VIEILGVEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPKTIGCSKNF 325
Query: 125 PGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTLHXXXXXXXXXXXXXXXX 184
PG AL T VQ WL QL +EL ERL D N R+A L +
Sbjct: 326 PGKTALTTREQVQWWLLQLAQELEERLTKDRNDNDRVATQLAV----SIRVQGDKRLSSL 381
Query: 185 XXXCPL-RYGTAKIQEDTFNLFQAGLREFLGSFGVKTQGSHYSGWRITALSVSASKIVPV 243
C L RY K+ D F + + + G+KT S +T L + A+K
Sbjct: 382 RRCCALTRYDAHKMSHDAFAVIKN-----CNTSGIKTDWSP----PLTMLFLCATKFSAP 432
Query: 244 LSGTCSIMKYFNGPDKFGSTS 264
+C+ + F D T+
Sbjct: 433 APSSCTDITTFLSSDPSSVTN 453
Score = 38 (18.4 bits), Expect = 6.3e-39, Sum P(2) = 6.3e-39
Identities = 16/76 (21%), Positives = 31/76 (40%)
Query: 423 PKERLDNSTGDCLSESNQNQVNIPKERLAEAATTSTSTDRCGSDQIQQRSESWKLRIEEI 482
P+E + + + ++QN V +L + TT T D + + S S L + +
Sbjct: 560 PEELTNGFPTEYPNYTDQNLVCQAVPKLGTSKTTPTELDLTQNSPSRLASSSSALEVAQ- 618
Query: 483 DPSVIDELPKEIQDEI 498
S P +D++
Sbjct: 619 -KSTTTPSPMAAEDQV 633
>UNIPROTKB|F1NCM3 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0010225 "response to
UV-C" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 InterPro:IPR017061
PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942 EMBL:AADN02011866
EMBL:AADN02011865 IPI:IPI00818532 Ensembl:ENSGALT00000038044
ArrayExpress:F1NCM3 Uniprot:F1NCM3
Length = 657
Score = 418 (152.2 bits), Expect = 1.0e-38, P = 1.0e-38
Identities = 101/240 (42%), Positives = 130/240 (54%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
V K T F CSAGI+HNKMLAKLA G+NKP +QT V SV L +P+ ++ LGGKLG
Sbjct: 195 VEKATGFRCSAGISHNKMLAKLACGLNKPNRQTLVSSRSVPQLFSQMPVSSIRNLGGKLG 254
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
++ + LGV +G++ KFSE +LQ +G TG+WL+++ RGI E V+ R LP+S G K
Sbjct: 255 VAITDILGVEYIGEVTKFSEMELQTHFGDKTGSWLYDLCRGIDDEPVKNRHLPQSIGCSK 314
Query: 123 SFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTLHXXXXXXXXXXXXXX 182
+FPG AL T VQHWL QL EL RL D QN R+A L +
Sbjct: 315 NFPGKTALATQKEVQHWLLQLALELESRLIKDRSQNHRVAKQLMV-------VIRMQGDT 367
Query: 183 XXXXXCPL-RYGTAKIQEDTFNLFQAGLREFLGSFGVKTQGSHYSGWRITALSV--SASK 239
C + RY KI D F L Q G+H + W +SV +ASK
Sbjct: 368 RLSRFCAVTRYDAQKIFNDAFALIQ----------NCNMAGAHQAAWSPPLISVHLAASK 417
>UNIPROTKB|F1NAG6 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0010225 "response to
UV-C" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 OMA:SPPLTML
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:AADN02011866 EMBL:AADN02011865 IPI:IPI00596429
Ensembl:ENSGALT00000016798 ArrayExpress:F1NAG6 Uniprot:F1NAG6
Length = 686
Score = 418 (152.2 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 101/240 (42%), Positives = 130/240 (54%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
V K T F CSAGI+HNKMLAKLA G+NKP +QT V SV L +P+ ++ LGGKLG
Sbjct: 195 VEKATGFRCSAGISHNKMLAKLACGLNKPNRQTLVSSRSVPQLFSQMPVSSIRNLGGKLG 254
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
++ + LGV +G++ KFSE +LQ +G TG+WL+++ RGI E V+ R LP+S G K
Sbjct: 255 VAITDILGVEYIGEVTKFSEMELQTHFGDKTGSWLYDLCRGIDDEPVKNRHLPQSIGCSK 314
Query: 123 SFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTLHXXXXXXXXXXXXXX 182
+FPG AL T VQHWL QL EL RL D QN R+A L +
Sbjct: 315 NFPGKTALATQKEVQHWLLQLALELESRLIKDRSQNHRVAKQLMV-------VIRMQGDT 367
Query: 183 XXXXXCPL-RYGTAKIQEDTFNLFQAGLREFLGSFGVKTQGSHYSGWRITALSV--SASK 239
C + RY KI D F L Q G+H + W +SV +ASK
Sbjct: 368 RLSRFCAVTRYDAQKIFNDAFALIQ----------NCNMAGAHQAAWSPPLISVHLAASK 417
>RGD|1309893 [details] [associations]
symbol:Polh "polymerase (DNA directed), eta" species:10116
"Rattus norvegicus" [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006290 "pyrimidine dimer repair"
evidence=IEA;ISO] [GO:0006301 "postreplication repair"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0010225 "response to UV-C" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
RGD:1309893 GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
EMBL:CH473987 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 OMA:SPPLTML OrthoDB:EOG4RBQJ8 InterPro:IPR017061
PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942 IPI:IPI00194322
RefSeq:NP_001101674.1 UniGene:Rn.53711 Ensembl:ENSRNOT00000026049
GeneID:316235 KEGG:rno:316235 UCSC:RGD:1309893 NextBio:670614
Uniprot:D4ADZ0
Length = 689
Score = 410 (149.4 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 108/292 (36%), Positives = 152/292 (52%)
Query: 5 KETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLGTS 64
++T F CSAGI+HNK+LAKLA G+NKP +QT V SV L +PI+K++ LGGKLG S
Sbjct: 205 RKTGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPIRKIRSLGGKLGAS 264
Query: 65 LQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSF 124
+ + LGV +GDL +F+E +LQ +G G+WL+ + RGI E V+ R LPK+ G K+F
Sbjct: 265 VIDVLGVEYMGDLTQFTEAQLQSHFGEKNGSWLYAMCRGIEHEPVKPRQLPKTIGCSKNF 324
Query: 125 PGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTLHXXXXXXXXXXXXXXXX 184
PG AL T VQ WL QL EL ERL D N R+A L +
Sbjct: 325 PGKTALATREQVQWWLLQLALELEERLTKDRTDNGRVATQLVV----SIRVEGDKRLSSL 380
Query: 185 XXXCPL-RYGTAKIQEDTFNLFQAGLREFLGSFGVKTQGSHYSGWRITALSVSASKIVPV 243
C L RY K+ +D F A +R + GV+T+ S +T L + A+K
Sbjct: 381 RRCCALTRYDAHKMSQDAF----ATIRN-CNTSGVQTEWSP----PLTMLFLCATKFSAS 431
Query: 244 LSGTCSIMKYFNGPDKFGSTSEQLP-----DNFIDAAPLSPSGSESYSTLNS 290
C+ + F D ++P + P +P+ E+ ++L S
Sbjct: 432 APPACTDITVFLSSDS--GCQPKVPAASSGTRTQEPGPAAPTSKEAATSLES 481
>MGI|MGI:1891457 [details] [associations]
symbol:Polh "polymerase (DNA directed), eta (RAD 30
related)" species:10090 "Mus musculus" [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006290
"pyrimidine dimer repair" evidence=IDA] [GO:0006301
"postreplication repair" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0010225 "response to UV-C"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 MGI:MGI:1891457 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 HOGENOM:HOG000115605 HOVERGEN:HBG053633 OMA:SPPLTML
OrthoDB:EOG4RBQJ8 InterPro:IPR017061 PIRSF:PIRSF036603
EMBL:AB027128 EMBL:AB037184 EMBL:AK036296 IPI:IPI00122040
RefSeq:NP_109640.1 UniGene:Mm.311585 ProteinModelPortal:Q9JJN0
SMR:Q9JJN0 IntAct:Q9JJN0 STRING:Q9JJN0 PhosphoSite:Q9JJN0
PRIDE:Q9JJN0 Ensembl:ENSMUST00000024749 GeneID:80905 KEGG:mmu:80905
UCSC:uc008crx.1 GeneTree:ENSGT00530000062942 InParanoid:Q9JJN0
NextBio:350254 Bgee:Q9JJN0 CleanEx:MM_POLH Genevestigator:Q9JJN0
GermOnline:ENSMUSG00000023953 Uniprot:Q9JJN0
Length = 694
Score = 407 (148.3 bits), Expect = 2.3e-37, P = 2.3e-37
Identities = 106/291 (36%), Positives = 151/291 (51%)
Query: 6 ETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLGTSL 65
+T F CSAGI+HNK+LAKLA G+NKP +QT V SV L +PI+K++ LGGKLG S+
Sbjct: 206 KTGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPIRKIRSLGGKLGASV 265
Query: 66 QNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSFP 125
LG+ +GDL +F+E +LQ +G G+WL+ + RGI + V+ R LPK+ G K+FP
Sbjct: 266 IEVLGIEYMGDLTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPKTIGCSKNFP 325
Query: 126 GPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTLHXXXXXXXXXXXXXXXXX 185
G AL T VQ WL QL EL ERL D N R+A L +
Sbjct: 326 GKTALATREQVQWWLLQLALELEERLTKDRNDNDRVATQLVV----SIRFQGDRRLSSLR 381
Query: 186 XXCPL-RYGTAKIQEDTFNLFQAGLREFLGSFGVKTQGSHYSGWRITALSVSASKIVPVL 244
C L RY K+ +D F A +R + G++T+ S +T L + A+K
Sbjct: 382 RCCALPRYDAHKMSQDAF----AAIRN-CNTSGIQTEWSP----PLTMLFLCATKFSAAA 432
Query: 245 SGTCSIMKYFNGPDKFGSTSEQLPDNFID-----AAPLSPSGSESYSTLNS 290
C+ + F D S ++P + + P P+ E+ ++L S
Sbjct: 433 PPACTDITAFLSSDS--SCQPKVPIASSETRTQGSGPAVPTSKEAATSLAS 481
>UNIPROTKB|B4DG64 [details] [associations]
symbol:POLH "DNA polymerase eta" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0006301
GO:GO:0003887 GO:GO:0006290 Gene3D:3.30.1490.100 SUPFAM:SSF100879
EMBL:AL353602 EMBL:AL355802 UniGene:Hs.655467 HGNC:HGNC:9181
HOVERGEN:HBG053633 InterPro:IPR017061 PIRSF:PIRSF036603
EMBL:AK294430 IPI:IPI00646080 SMR:B4DG64 STRING:B4DG64
Ensembl:ENST00000535400 Uniprot:B4DG64
Length = 651
Score = 403 (146.9 bits), Expect = 4.5e-37, P = 4.5e-37
Identities = 87/203 (42%), Positives = 117/203 (57%)
Query: 5 KETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLGTS 64
+ET F CSAGI+HNK+LAKLA G+NKP +QT V SV L +PI+K++ LGGKLG S
Sbjct: 144 RETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPIRKIRSLGGKLGAS 203
Query: 65 LQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSF 124
+ LG+ +G+L +F+E +LQ +G G+WL+ + RGI + V+ R LPK+ G K+F
Sbjct: 204 VIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPKTIGCSKNF 263
Query: 125 PGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTLHXXXXXXXXXXXXXXXX 184
PG AL T VQ WL QL +EL ERL D N R+A L +
Sbjct: 264 PGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVV----SIRVQGDKRLSSL 319
Query: 185 XXXCPL-RYGTAKIQEDTFNLFQ 206
C L RY K+ D F + +
Sbjct: 320 RRCCALTRYDAHKMSHDAFTVIK 342
>UNIPROTKB|Q9Y253 [details] [associations]
symbol:POLH "DNA polymerase eta" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006290 "pyrimidine dimer repair"
evidence=IEA] [GO:0006301 "postreplication repair" evidence=IEA]
[GO:0000731 "DNA synthesis involved in DNA repair" evidence=IDA]
[GO:0010225 "response to UV-C" evidence=IDA] [GO:0006282
"regulation of DNA repair" evidence=TAS] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_216
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0005654 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0010225 GO:GO:0000731 GO:GO:0006301 GO:GO:0006282
GO:GO:0003887 GO:GO:0006290 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 CleanEx:HS_POLH KO:K03509 EMBL:AL353602
EMBL:AB024313 EMBL:AF158185 EMBL:AB038008 EMBL:AY388614
EMBL:AL355802 EMBL:BC015742 IPI:IPI00008011 IPI:IPI00552037
RefSeq:NP_006493.1 UniGene:Hs.655467 PDB:2I5O PDB:2LSK PDB:3MR2
PDB:3MR3 PDB:3MR5 PDB:3MR6 PDB:3SI8 PDB:3TQ1 PDB:4DL2 PDB:4DL3
PDB:4DL4 PDB:4DL5 PDB:4DL6 PDB:4DL7 PDB:4ECQ PDB:4ECR PDB:4ECS
PDB:4ECT PDB:4ECU PDB:4ECV PDB:4ECW PDB:4ECX PDB:4ECY PDB:4ECZ
PDB:4ED0 PDB:4ED1 PDB:4ED2 PDB:4ED3 PDB:4ED6 PDB:4ED7 PDB:4ED8
PDB:4EEY PDBsum:2I5O PDBsum:2LSK PDBsum:3MR2 PDBsum:3MR3
PDBsum:3MR5 PDBsum:3MR6 PDBsum:3SI8 PDBsum:3TQ1 PDBsum:4DL2
PDBsum:4DL3 PDBsum:4DL4 PDBsum:4DL5 PDBsum:4DL6 PDBsum:4DL7
PDBsum:4ECQ PDBsum:4ECR PDBsum:4ECS PDBsum:4ECT PDBsum:4ECU
PDBsum:4ECV PDBsum:4ECW PDBsum:4ECX PDBsum:4ECY PDBsum:4ECZ
PDBsum:4ED0 PDBsum:4ED1 PDBsum:4ED2 PDBsum:4ED3 PDBsum:4ED6
PDBsum:4ED7 PDBsum:4ED8 PDBsum:4EEY ProteinModelPortal:Q9Y253
SMR:Q9Y253 IntAct:Q9Y253 MINT:MINT-2789553 STRING:Q9Y253
PhosphoSite:Q9Y253 DMDM:59798441 PRIDE:Q9Y253
Ensembl:ENST00000372226 Ensembl:ENST00000372236 GeneID:5429
KEGG:hsa:5429 UCSC:uc003ovq.4 CTD:5429 GeneCards:GC06P043543
HGNC:HGNC:9181 HPA:HPA006721 HPA:HPA026762 MIM:278750 MIM:603968
neXtProt:NX_Q9Y253 Orphanet:90342 PharmGKB:PA279
HOGENOM:HOG000115605 HOVERGEN:HBG053633 InParanoid:Q9Y253
OMA:SPPLTML OrthoDB:EOG4RBQJ8 PhylomeDB:Q9Y253 SABIO-RK:Q9Y253
BindingDB:Q9Y253 ChEMBL:CHEMBL5542 EvolutionaryTrace:Q9Y253
GenomeRNAi:5429 NextBio:21005 ArrayExpress:Q9Y253 Bgee:Q9Y253
Genevestigator:Q9Y253 GermOnline:ENSG00000170734 InterPro:IPR017061
PIRSF:PIRSF036603 Uniprot:Q9Y253
Length = 713
Score = 403 (146.9 bits), Expect = 7.2e-37, P = 7.2e-37
Identities = 87/203 (42%), Positives = 117/203 (57%)
Query: 5 KETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLGTS 64
+ET F CSAGI+HNK+LAKLA G+NKP +QT V SV L +PI+K++ LGGKLG S
Sbjct: 206 RETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPIRKIRSLGGKLGAS 265
Query: 65 LQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSF 124
+ LG+ +G+L +F+E +LQ +G G+WL+ + RGI + V+ R LPK+ G K+F
Sbjct: 266 VIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPKTIGCSKNF 325
Query: 125 PGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTLHXXXXXXXXXXXXXXXX 184
PG AL T VQ WL QL +EL ERL D N R+A L +
Sbjct: 326 PGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVV----SIRVQGDKRLSSL 381
Query: 185 XXXCPL-RYGTAKIQEDTFNLFQ 206
C L RY K+ D F + +
Sbjct: 382 RRCCALTRYDAHKMSHDAFTVIK 404
>UNIPROTKB|F1MZ79 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010225 "response to UV-C" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 OMA:SPPLTML
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:DAAA02055099 IPI:IPI00691559 Ensembl:ENSBTAT00000007900
Uniprot:F1MZ79
Length = 710
Score = 386 (140.9 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 79/163 (48%), Positives = 106/163 (65%)
Query: 5 KETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLGTS 64
++T F CSAGI+HNK+LAKLA G+NKP +QT V SV L + +PI K++ LGGKLG S
Sbjct: 205 RQTGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFNQVPISKIRNLGGKLGAS 264
Query: 65 LQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSF 124
+ LGV +G+L +FSE +LQ +G G+WL+ + RGI + V+ R + K+ G K+F
Sbjct: 265 VIEILGVEYMGELTQFSEPQLQSHFGERNGSWLYAMCRGIEHDPVKPRPITKTLGCSKNF 324
Query: 125 PGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
PG AL T VQ WL QL +EL ERL D N R+A L +
Sbjct: 325 PGKTALSTRDQVQWWLLQLAQELEERLIKDRNANDRVATQLVV 367
Score = 37 (18.1 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 455 TTSTSTDRCGSDQIQQRSESWKLRIEEIDPSVIDELPKEIQDEIQAWLRPSKRPHRVKQ 513
TT S+D ++ S K + P+V PK+ ++++ + + H+VK+
Sbjct: 440 TTFLSSDPSSLPKVPITSSEAKT--QGSGPAVTT--PKKATTSLESFFQKAAEKHKVKE 494
>UNIPROTKB|F1RRJ6 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010225 "response to UV-C" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509 CTD:5429
OMA:SPPLTML InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:CR974460 RefSeq:XP_003356678.1
UniGene:Ssc.83954 Ensembl:ENSSSCT00000001879 GeneID:100153104
KEGG:ssc:100153104 Uniprot:F1RRJ6
Length = 698
Score = 384 (140.2 bits), Expect = 2.5e-36, Sum P(2) = 2.5e-36
Identities = 93/244 (38%), Positives = 133/244 (54%)
Query: 5 KETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLGTS 64
++T CSAGI+HNK+LAKLA ++KP +QT V SV + +PI K++ LGGKLG S
Sbjct: 206 RQTGLQCSAGISHNKVLAKLACALHKPNRQTLVSLGSVPQVFSQMPISKVRHLGGKLGAS 265
Query: 65 LQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSF 124
+ LG+ +G+L +F+E +LQ +G G+WL+ + RGI E V+ R + K+ G GK+F
Sbjct: 266 IIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHEPVRPRQVTKTLGCGKNF 325
Query: 125 PGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTLHXXXXXXXXXXXXXXXX 184
PG AL T VQ WL QL +EL ERL D N R+A L +
Sbjct: 326 PGKTALVTREQVQWWLLQLAQELEERLTKDRNDNDRVATQLAV----SIRVLGDKRLSSL 381
Query: 185 XXXCPL-RYGTAKIQEDTFNLFQAGLREFLGSFGVKTQGSHYSGWRITALSVSASKIVPV 243
C L Y K+ +D F A +R + S G++T+ S +T L + A+K
Sbjct: 382 RRCCALTHYDAHKMSQDAF----AAIRNYNTS-GIQTEWSP----PLTMLFLCATKFSAS 432
Query: 244 LSGT 247
+GT
Sbjct: 433 SAGT 436
Score = 37 (18.1 bits), Expect = 2.5e-36, Sum P(2) = 2.5e-36
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 254 FNGPDKFGSTSEQLPDNFIDAAP 276
F P K S+ ++LP + D P
Sbjct: 548 FFPPQKPQSSPKELPTEYPDGGP 570
>FB|FBgn0037141 [details] [associations]
symbol:DNApol-eta "DNApol-eta" species:7227 "Drosophila
melanogaster" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IMP;IDA;NAS] [GO:0019985 "translesion synthesis"
evidence=ISS;NAS;IDA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IMP] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0000724 GO:GO:0003887
GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
HSSP:P96022 InterPro:IPR017061 PIRSF:PIRSF036603 EMBL:AY058771
EMBL:AB049433 EMBL:AB036766 IntAct:Q9GNC0 STRING:Q9GNC0
FlyBase:FBgn0037141 InParanoid:Q9GNC0 OrthoDB:EOG4XPNX1
Uniprot:Q9GNC0
Length = 885
Score = 393 (143.4 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 96/254 (37%), Positives = 135/254 (53%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
V KET + CSAGIAHNK+LAKLA+GMNKP +QT +P + L DSLP+ K+K LGGK G
Sbjct: 219 VKKETGYECSAGIAHNKILAKLAAGMNKPNKQTILPLTETASLFDSLPVGKIKGLGGKFG 278
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
+ LG+ +G ++KFSE LQ + GTWL+NI+RGI E V R KS G K
Sbjct: 279 EVVCETLGIKFMGQVVKFSEVDLQRKFDEKNGTWLFNISRGIDLEAVTPRFYSKSIGCCK 338
Query: 123 SFPGPRALKTVASVQHWLNQLCEELSERLCSD-LEQNKRIAHTLTLHXXXXXXXXXXXXX 181
FPG + + ++QHWL +L E+++RL D +E N+R H + +
Sbjct: 339 KFPGRNNITGLKTLQHWLGELSSEINDRLEKDFIENNRRAKHMVVQYVQDIDGEEVASSR 398
Query: 182 XXXXXXCPLR-YGTAKIQEDTFNLFQAGLREFLGSFGVKTQGSHYSGWRITALSVSASKI 240
LR Y I + +L +A + FL G ++ ++ I L +S K
Sbjct: 399 STA-----LRDYDQESIVRLSLDLIKANTKTFLRP-GSESALNN----AIKFLGISVGKF 448
Query: 241 VPVLSGTCSIMKYF 254
V SG + + F
Sbjct: 449 ETVSSGQNKLQEMF 462
>WB|WBGene00018721 [details] [associations]
symbol:polh-1 species:6239 "Caenorhabditis elegans"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005634
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03509 InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:FO080224 EMBL:AB244413 PIR:A88395
RefSeq:NP_497480.2 UniGene:Cel.10441 ProteinModelPortal:G5EFY1
SMR:G5EFY1 EnsemblMetazoa:F53A3.2 GeneID:175337
KEGG:cel:CELE_F53A3.2 CTD:175337 WormBase:F53A3.2 OMA:GVGNNKM
NextBio:887718 Uniprot:G5EFY1
Length = 584
Score = 298 (110.0 bits), Expect = 9.5e-24, P = 9.5e-24
Identities = 62/164 (37%), Positives = 101/164 (61%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKL 61
Q+ +ET+F CSAG+ +NKM+AKL +KP QQT +P+ V+ +L PI ++ GGK+
Sbjct: 202 QIHEETQFFCSAGVGNNKMMAKLVCARHKPRQQTLIPWFYVREILRLTPIGDVRGFGGKM 261
Query: 62 GTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSG 121
G +Q L +T +G+LL+ +L E++ N +L ++A G E V+ R S
Sbjct: 262 GNRIQEMLNITLMGELLEVDISQLIETFP-NQHEYLRSVAEGHCDEPVRPRKESSSIAVS 320
Query: 122 KSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTL 165
K+FPG ++++V ++ WL+ L +EL++RL +D +NKR A L
Sbjct: 321 KNFPGKLSIRSVLELKKWLDGLTKELAKRLATDQAENKRTAENL 364
>UNIPROTKB|G5EH81 [details] [associations]
symbol:MGCH7_ch7g688 "Sister chromatid cohesion protein
Eso1" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0003684 GO:GO:0006281 EMBL:CM000230 EMBL:CM001237
GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
InterPro:IPR017061 PIRSF:PIRSF036603 RefSeq:XP_003720794.1
EnsemblFungi:MGG_02924T0 GeneID:2682477 KEGG:mgr:MGG_02924
Uniprot:G5EH81
Length = 668
Score = 254 (94.5 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 61/168 (36%), Positives = 90/168 (53%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
+ ++TCSAG+A NK+L+KL S KP QQT + +V+ L K++ LGGKLG
Sbjct: 257 IFTRLKYTCSAGVAGNKLLSKLGSAHKKPNQQTVIRGRAVRKFLSDFKFTKIRNLGGKLG 316
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGF-NTGTWLWNIARGISGEEVQARLLPKSHGSG 121
+ G +V DLL+ D+L+ G +T W++N RGI EV +R KS S
Sbjct: 317 DQVVAAFGTESVSDLLEVPLDQLKLRLGEESTALWVYNTIRGIDNSEVNSRTQIKSMLSA 376
Query: 122 KSFPGPRALKTVASVQHWLNQLCEELSERLCSD-LEQNKRIAHTLTLH 168
KSF P ++ +V WL ++ RL + + +NKR T+ LH
Sbjct: 377 KSFR-P-SIHSVDQANKWLRIFSADIFSRLVEEGVLENKRRPKTMNLH 422
>ASPGD|ASPL0000072145 [details] [associations]
symbol:AN4678 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0019985 "translesion synthesis"
evidence=IEA] [GO:0034087 "establishment of mitotic sister
chromatid cohesion" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:BN001303
EMBL:AACD01000080 GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03509 OrthoDB:EOG4M0J8V InterPro:IPR017061
PIRSF:PIRSF036603 RefSeq:XP_662282.1 ProteinModelPortal:Q5B452
STRING:Q5B452 EnsemblFungi:CADANIAT00005754 GeneID:2872476
KEGG:ani:AN4678.2 HOGENOM:HOG000173699 OMA:DDPDWDD Uniprot:Q5B452
Length = 674
Score = 252 (93.8 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 60/167 (35%), Positives = 87/167 (52%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
V +TCSAGIA NKM+AKL S NKP +QT V +++ L K++ LGGKLG
Sbjct: 274 VWNSLSYTCSAGIAKNKMMAKLGSATNKPNKQTVVRNRAIQNFLSGFKFTKIRMLGGKLG 333
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
+ G + +LLK S ++ + +T WL+ I RG EV R KS S K
Sbjct: 334 DQVTAMFGTEQISELLKVSLEQFRAKLNDDTAVWLYGIIRGEDKSEVNPRTQIKSMLSAK 393
Query: 123 SFPGPRALKTVASVQHWLNQLCEELSERLCSD-LEQNKRIAHTLTLH 168
SF P ++ T+ WL+ ++ RL + + ++KR T+ LH
Sbjct: 394 SFR-P-SINTLDQADKWLHIFAADIYGRLVEEGVLEHKRRPKTIALH 438
>POMBASE|SPBC16A3.11 [details] [associations]
symbol:eso1 "sister chromatid cohesion protein/DNA
polymerase eta Eso1 fusion protein" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006473
"protein acetylation" evidence=IC] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016407 "acetyltransferase activity"
evidence=ISS] [GO:0019985 "translesion synthesis" evidence=IMP]
[GO:0034087 "establishment of mitotic sister chromatid cohesion"
evidence=IMP] [GO:0034182 "regulation of maintenance of mitotic
sister chromatid cohesion" evidence=TAS] [GO:0043596 "nuclear
replication fork" evidence=IC] InterPro:IPR001126
InterPro:IPR015880 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00355
PomBase:SPBC16A3.11 GO:GO:0046872 GO:GO:0003684 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0000790 GO:GO:0043596
GO:GO:0016746 GO:GO:0034087 GO:GO:0006473 GO:GO:0003887
GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
KO:K03509 EMBL:AB039861 PIR:T39541 RefSeq:NP_596778.1
ProteinModelPortal:O42917 IntAct:O42917 STRING:O42917
EnsemblFungi:SPBC16A3.11.1 GeneID:2539666 KEGG:spo:SPBC16A3.11
OrthoDB:EOG4M0J8V NextBio:20800820 GO:GO:0034182 Uniprot:O42917
Length = 872
Score = 227 (85.0 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 51/155 (32%), Positives = 83/155 (53%)
Query: 6 ETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLGTSL 65
+ ++TCSAG++ N ML+KL S NKP +QT + ++++ L SL I ++ LGGK G +
Sbjct: 233 QLKYTCSAGVSFNPMLSKLVSSRNKPNKQTILTKNAIQDYLVSLKITDIRMLGGKFGEEI 292
Query: 66 QNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSFP 125
N LG ++ D+ S D L + G G +WN+ GI E+ ++ KS S K+F
Sbjct: 293 INLLGTDSIKDVWNMSMDFLIDKLGQTNGPLVWNLCHGIDNTEITTQVQIKSMLSAKNF- 351
Query: 126 GPRALKTVASVQHWLNQLCEELSERLCSDLEQNKR 160
+ +K+ +W +L R +LE +R
Sbjct: 352 SQQKVKSEEDAINWFQVFASDLRSRFL-ELEGMRR 385
>CGD|CAL0002818 [details] [associations]
symbol:RAD32 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005657 "replication fork"
evidence=IEA] [GO:0070987 "error-free translesion synthesis"
evidence=IEA] [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0034087 "establishment of mitotic sister
chromatid cohesion" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 CGD:CAL0002818 GO:GO:0003684 GO:GO:0006281
GO:GO:0003887 EMBL:AACQ01000019 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03509 HOGENOM:HOG000065930 RefSeq:XP_720989.1
ProteinModelPortal:Q5AHD1 STRING:Q5AHD1 GeneID:3637340
KEGG:cal:CaO19.866 Uniprot:Q5AHD1
Length = 640
Score = 201 (75.8 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 52/168 (30%), Positives = 89/168 (52%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
+ +E +T SAG+A K +AKLA+G KP QT + S++ L + + + +GGKLG
Sbjct: 262 IFEELGYTTSAGLARTKQVAKLAAGFKKPDAQTIIRNSAINSFLTNFELTDVTGMGGKLG 321
Query: 63 TSLQNELGV----TTVGDLLK-FSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKS 117
S+ N++ V ++ + + FS+ ++E G G ++NI RGI+ E+Q+ + KS
Sbjct: 322 ESIINKVNVPPQINSISFIRENFSDASIKEKLGGELGLKVYNIVRGINAIELQSTIEVKS 381
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLE-QNKRIAHT 164
S K+F + + WL +L RL DL+ +N ++ T
Sbjct: 382 MTSTKNFTS-FVISNLFDAYDWLKVFAGDLHNRLI-DLDSENMELSST 427
>TAIR|locus:2156319 [details] [associations]
symbol:REV1 species:3702 "Arabidopsis thaliana"
[GO:0000287 "magnesium ion binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA;IDA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0010224 "response to UV-B"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0050665 "hydrogen peroxide
biosynthetic process" evidence=RCA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000287 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 GO:GO:0006974 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0010224 GO:GO:0003887 eggNOG:COG0389
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AB016874 EMBL:AC002342
EMBL:AB187523 EMBL:EF016093 EMBL:EF016094 EMBL:EF016095
EMBL:EF016096 EMBL:EF016097 EMBL:EF016098 EMBL:AY080825
IPI:IPI00517369 IPI:IPI00554422 IPI:IPI00837466 IPI:IPI00891315
RefSeq:NP_001119373.1 RefSeq:NP_199288.4 UniGene:At.30056
ProteinModelPortal:A3EWL3 SMR:A3EWL3 STRING:A3EWL3 PRIDE:A3EWL3
EnsemblPlants:AT5G44750.2 GeneID:834504 KEGG:ath:AT5G44750
TAIR:At5g44750 HOGENOM:HOG000246421 KO:K03515 OMA:TIPYDFD
PhylomeDB:A3EWL3 ProtClustDB:CLSN2681660 Genevestigator:A3EWL3
Uniprot:A3EWL3
Length = 1105
Score = 194 (73.4 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 52/153 (33%), Positives = 80/153 (52%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKL 61
++L+ T + SAGI ++A+LA+ + KPA Q + V+ LD LP+ + +G L
Sbjct: 500 EILETTGCSASAGIGGTMLMARLATRVAKPAGQLYISAEKVEEFLDQLPVGTLPGVGSVL 559
Query: 62 GTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSG 121
L + + T G L S+D LQ+ +G TG LW+ +RG+ V A KS G+
Sbjct: 560 KEKLVKQ-NIQTCGQLRLISKDSLQKDFGVKTGEMLWSYSRGLDLRSVTAVQESKSIGAE 618
Query: 122 KSFPGPR---ALKTVASVQHWLNQLCEELSERL 151
++ G R VQH+L LC+E+S RL
Sbjct: 619 VNW-GVRFRDQQDVFILVQHFLQCLCKEVSLRL 650
Score = 50 (22.7 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 479 IEEIDPSVIDELPKEIQDEIQAWLRPSKR 507
+ ++D SV+ ELP+E++ ++ PS R
Sbjct: 912 LSQVDVSVLQELPEELRADVLGAF-PSHR 939
>UNIPROTKB|F1PDA5 [details] [associations]
symbol:POLI "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:VFYELPE EMBL:AAEX03000145 Ensembl:ENSCAFT00000000242
Uniprot:F1PDA5
Length = 702
Score = 163 (62.4 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 51/159 (32%), Positives = 79/159 (49%)
Query: 10 TCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLP-IKKMKQLGGKLGTSLQNE 68
T AG+A NK+LAKL SG+ KP QQT + S + L+ SL +K+M +G K L+
Sbjct: 180 TGCAGVASNKLLAKLVSGVFKPNQQTVLLPESSQVLIQSLNHVKEMPGIGYKTAKRLE-A 238
Query: 69 LGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSFPGPR 128
LG+++V DL FS L++ G + + ++ G V P+S SF +
Sbjct: 239 LGISSVYDLQTFSSKILEKELGISVAQRIQKLSFGEDNSPVTPSGPPQSFSEEDSF---K 295
Query: 129 ALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
+ V++ + +L L R+C D R HT+ L
Sbjct: 296 KCSSEVEVKNKIEELLASLLNRVCQD----GRKPHTIRL 330
Score = 70 (29.7 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 469 QQRSESWKLRI-EEIDPSVIDELPKEIQDEIQA-WLRPSKRPHRV 511
+Q S K+ ++DP V ELP+E+Q E+ A W R H V
Sbjct: 656 EQDSSDEKITFPSDVDPEVFYELPEEVQKELLADWKRAGSDFHNV 700
Score = 68 (29.0 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 26/96 (27%), Positives = 42/96 (43%)
Query: 405 LLPLGDCLSESNKKQVNIPKERLDNSTGDCLSESNQNQVNIPKERLAEAATTSTSTDRCG 464
L P S S K+ + +++ D E+N + +P R+ T D
Sbjct: 414 LTPSLSTTSRSGKRSFKMKDSHMEDFPKD--KETNWDF--LPSGRIESTRTGEAPRDTAD 469
Query: 465 SDQIQQRSESWKLRI--EEIDPSVIDELPKEIQDEI 498
+ ++ S+ + LR E ID V ELP +IQ+EI
Sbjct: 470 FSK-EKDSDEFPLRSLPEGIDQEVFKELPVDIQEEI 504
Score = 46 (21.3 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 27/115 (23%), Positives = 47/115 (40%)
Query: 317 KANTWNGLDPSCXXXXXXXXXXXXXXLDQNKPQNRDDSRMRSVPIKSNQQEHKKSALKDK 376
K W+ L PS D +K ++ D+ +RS+P +Q+ K+ + +
Sbjct: 443 KETNWDFL-PSGRIESTRTGEAPRDTADFSKEKDSDEFPLRSLPEGIDQEVFKELPVDIQ 501
Query: 377 GASSILNFFKSGDLSCSSGNHDTE-HAETLLPLGDCLSESNKKQVNIPKERLDNS 430
IL+ KSG+ G+ + HA + + +N PK+ L NS
Sbjct: 502 --EEILSG-KSGEKVQGKGSLNCPLHASRGVLSFFSTKQMQDSPLN-PKDHLSNS 552
Score = 37 (18.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 26/116 (22%), Positives = 47/116 (40%)
Query: 189 PLRYGTAKIQEDTFNLFQAGLREFL--GSFGVKTQGSHYSGWRITA----LSVSASKIVP 242
PLR I ++ F ++E + G G K QG + A LS ++K
Sbjct: 480 PLRSLPEGIDQEVFKELPVDIQEEILSGKSGEKVQGKGSLNCPLHASRGVLSFFSTK--Q 537
Query: 243 VLSGTCSIMKYFNGPDKFGSTSEQLPDNF-IDAAPLSPSGSE-SYSTLNSTELQNE 296
+ + + + + S S P ++++ SP S+ +YS + LQ+E
Sbjct: 538 MQDSPLNPKDHLSNSKQISSVSSCEPGTSGLNSSSSSPPSSQKNYSHYIDSRLQDE 593
>UNIPROTKB|Q47155 [details] [associations]
symbol:dinB species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IDA] [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0019985
"translesion synthesis" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0009432 "SOS response"
evidence=IEP;IDA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 EMBL:U70214 GO:GO:0000731
GO:GO:0009432 GO:GO:0003887 EMBL:D38582 GO:GO:0019985 PDB:1OK7
PDB:1UNN PDBsum:1OK7 PDBsum:1UNN KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 EMBL:AF483080
EMBL:AF483081 EMBL:AF483082 EMBL:AF483083 EMBL:AF483084
EMBL:AF483085 EMBL:AF483086 EMBL:AF483087 EMBL:AF483088
EMBL:AF483089 EMBL:AF483090 EMBL:AF483091 EMBL:AF483092
EMBL:AF483093 EMBL:AF483094 EMBL:AF483095 EMBL:AF483096
EMBL:AF483097 EMBL:AF483098 EMBL:AF483099 EMBL:AF483100
EMBL:AF483101 EMBL:AF483102 EMBL:AF483103 EMBL:AF483104
EMBL:AF483105 PIR:H64747 RefSeq:NP_414766.1 RefSeq:YP_488526.1
ProteinModelPortal:Q47155 SMR:Q47155 IntAct:Q47155
EnsemblBacteria:EBESCT00000002588 EnsemblBacteria:EBESCT00000014477
GeneID:12932684 GeneID:944922 KEGG:ecj:Y75_p0222 KEGG:eco:b0231
PATRIC:32115577 EchoBASE:EB2935 EcoGene:EG13141 OMA:MNILNEY
ProtClustDB:PRK02406 BioCyc:EcoCyc:G6115-MONOMER
BioCyc:ECOL316407:JW0221-MONOMER BioCyc:MetaCyc:G6115-MONOMER
EvolutionaryTrace:Q47155 Genevestigator:Q47155 Uniprot:Q47155
Length = 351
Score = 184 (69.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 52/160 (32%), Positives = 80/160 (50%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
+ E + T SAG+A K LAK+AS MNKP Q + + V L +LP+ K+ +G K+
Sbjct: 130 IFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVG-KVS 188
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
+ +G+ T GD+ K L + +G G LW ++GI +V + L KS G +
Sbjct: 189 AAKLEAMGLRTCGDVQKCDLVMLLKRFG-KFGRILWERSQGIDERDVNSERLRKSVGVER 247
Query: 123 SFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIA 162
+ + HW CE + ERL +LE +R+A
Sbjct: 248 TM--------AEDIHHWSE--CEAIIERLYPELE--RRLA 275
>TIGR_CMR|CHY_1651 [details] [associations]
symbol:CHY_1651 "DNA polymerase IV - AMBIGUITY"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 HOGENOM:HOG000082710 RefSeq:YP_360472.1
HSSP:P96022 ProteinModelPortal:Q3ABL2 STRING:Q3ABL2 GeneID:3726655
KEGG:chy:CHY_1651 PATRIC:21276423 OMA:GNREIFQ
ProtClustDB:CLSK2464724 BioCyc:CHYD246194:GJCN-1650-MONOMER
Uniprot:Q3ABL2
Length = 391
Score = 175 (66.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 45/118 (38%), Positives = 67/118 (56%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKL 61
++ +ETE T S G+A NK LAKLAS +NKP V +V L LP++ + +G K+
Sbjct: 131 RIFEETELTASVGVAPNKFLAKLASEVNKPDGFCEVREDNVLDFLAPLPVEMLWGVGEKM 190
Query: 62 GTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHG 119
L N++G+ TV D + E L++ +G G L+ ++RGI EV +PKS G
Sbjct: 191 KERL-NDMGIKTVQDFWELPEFFLRKKFGV-LGQNLYYLSRGIDFREVIPERVPKSLG 246
>RGD|1305212 [details] [associations]
symbol:Poli "polymerase (DNA directed), iota" species:10116
"Rattus norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
RGD:1305212 GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 EMBL:CH473971
GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 CTD:11201 KO:K03510
OrthoDB:EOG46T310 IPI:IPI00870858 RefSeq:NP_001099607.1
UniGene:Rn.136855 Ensembl:ENSRNOT00000016189 GeneID:291526
KEGG:rno:291526 NextBio:632673 Uniprot:D4A8I8
Length = 732
Score = 144 (55.7 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 49/159 (30%), Positives = 75/159 (47%)
Query: 10 TCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLP-IKKMKQLGGKLGTSLQNE 68
T AG+A NK+LAKL SG+ KP QQT + S + L+ SL IK+M +G K L+
Sbjct: 214 TGCAGVAPNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEMPGIGYKTAKRLE-V 272
Query: 69 LGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSFPGPR 128
LG+ +V DL F L++ G + + ++ G V P+S +F +
Sbjct: 273 LGINSVHDLQTFPIKTLEKELGISVAQRIRKLSFGEDKSPVTPSGPPQSFSEEDTF---K 329
Query: 129 ALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
+ + + +L L R+C D R HT+ L
Sbjct: 330 KCSSEVEAKTKIEELLSSLLNRVCHD----GRKPHTIRL 364
Score = 83 (34.3 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 440 QNQVNIPKERLAEAATTSTSTDRCGSDQIQQRSESWKLRI-EEIDPSVIDELPKEIQDEI 498
Q++ R A++ + +T G + +Q S KL +IDP V ELP+E+Q E+
Sbjct: 657 QSEQLFSTHRTADSHKQTATTSHQGLENREQDSADEKLTFPSDIDPQVFYELPEEVQREL 716
Query: 499 QA-WLR 503
A W R
Sbjct: 717 MAEWKR 722
Score = 53 (23.7 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 16/67 (23%), Positives = 26/67 (38%)
Query: 433 DCLSESNQNQVNIPKERLAEAATTSTSTDR-CGSDQIQQRSESWKLRIEEIDPSVIDELP 491
D E N +P R+ + +D C + + E +D V +LP
Sbjct: 471 DSYKEKEANWDCLPSRRIESTRRGESPSDATCFPKEKDTSDLPLQFLPEGVDQEVFTQLP 530
Query: 492 KEIQDEI 498
+IQ+EI
Sbjct: 531 ADIQEEI 537
>UNIPROTKB|Q83EN5 [details] [associations]
symbol:dinP "DNA polymerase IV" species:227377 "Coxiella
burnetii RSA 493" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005737 GO:GO:0000287 GO:GO:0003684 GO:GO:0006281
GO:GO:0006261 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003887
HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:MNILNEY
RefSeq:NP_819324.2 GeneID:1208161 KEGG:cbu:CBU_0280 PATRIC:17929253
ProtClustDB:CLSK913950 BioCyc:CBUR227377:GJ7S-285-MONOMER
Uniprot:Q83EN5
Length = 372
Score = 173 (66.0 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 46/150 (30%), Positives = 76/150 (50%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKL 61
Q++K T SAG+A NK+LAK+AS NKP + S + +LPI+K+ +G K+
Sbjct: 152 QIVKRHSLTASAGVASNKLLAKVASAWNKPNGIKVILPSKADDFVKTLPIEKIHGVG-KI 210
Query: 62 GTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSG 121
+ + T DL S + L +S+G + G L+ + RGI V+ + KS
Sbjct: 211 TAQKMKAMNIHTCSDLQALSREALSKSFG-SFGVTLYELCRGIDPRSVEPNRIRKSVSVE 269
Query: 122 KSFPGPRALKTVASVQHWLNQLCEELSERL 151
+F + + T++ + L L +L +RL
Sbjct: 270 HTFS--QDIATLSECEIELANLFNDLKQRL 297
>TIGR_CMR|CBU_0280 [details] [associations]
symbol:CBU_0280 "DNA-damage-inducible protein P"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0003887 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:MNILNEY
RefSeq:NP_819324.2 GeneID:1208161 KEGG:cbu:CBU_0280 PATRIC:17929253
ProtClustDB:CLSK913950 BioCyc:CBUR227377:GJ7S-285-MONOMER
Uniprot:Q83EN5
Length = 372
Score = 173 (66.0 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 46/150 (30%), Positives = 76/150 (50%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKL 61
Q++K T SAG+A NK+LAK+AS NKP + S + +LPI+K+ +G K+
Sbjct: 152 QIVKRHSLTASAGVASNKLLAKVASAWNKPNGIKVILPSKADDFVKTLPIEKIHGVG-KI 210
Query: 62 GTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSG 121
+ + T DL S + L +S+G + G L+ + RGI V+ + KS
Sbjct: 211 TAQKMKAMNIHTCSDLQALSREALSKSFG-SFGVTLYELCRGIDPRSVEPNRIRKSVSVE 269
Query: 122 KSFPGPRALKTVASVQHWLNQLCEELSERL 151
+F + + T++ + L L +L +RL
Sbjct: 270 HTFS--QDIATLSECEIELANLFNDLKQRL 297
>ZFIN|ZDB-GENE-050417-376 [details] [associations]
symbol:poli "polymerase (DNA directed) iota"
species:7955 "Danio rerio" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 ZFIN:ZDB-GENE-050417-376
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 CTD:11201 HOVERGEN:HBG053634 KO:K03510
EMBL:BC092781 IPI:IPI00481247 RefSeq:NP_001017834.1
UniGene:Dr.78857 ProteinModelPortal:Q568P0 SMR:Q568P0 GeneID:550532
KEGG:dre:550532 InParanoid:Q568P0 NextBio:20879773 Uniprot:Q568P0
Length = 710
Score = 163 (62.4 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 82/281 (29%), Positives = 120/281 (42%)
Query: 10 TCSAGIAHNKMLAKLASGMNKPAQQTTV-PFSSVKGLLDSLP-IKKMKQLGGKLGTSLQN 67
T AG+A NK+LAKL SG KP QQTT+ P S+ + L+ SL + K+ +G K L+
Sbjct: 199 TGCAGVASNKLLAKLVSGSFKPNQQTTLLPHSNAE-LMSSLTGLIKVPGIGYKTREKLK- 256
Query: 68 ELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSFPGP 127
LG+ V DL + L + +G + N+A GI V P+S SF
Sbjct: 257 ALGLVNVRDLQLYPLSDLVKEFGEMNAKRVQNLACGIDDSPVTPAGPPQSLSDEDSF--- 313
Query: 128 RALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTLHXXXXXXXXXXXXXXXXXXX 187
+ + T+ V + +L L+ER+ D Q HTL L
Sbjct: 314 KKMSTLEEVLKKIEELLINLTERMHKDGRQ----PHTLRL--TIRKYTVTNRWFNRESRQ 367
Query: 188 CPLRYGTA-KIQEDTFNLFQAGLREFLGSFGVKTQGSHYSGWRITALSVSASKIVPVLSG 246
CP+ T KI + L + F K H + +T L+V S + S
Sbjct: 368 CPIPNHTGLKITGGSSEAVPQLLSLSMKLFH-KMVDPHQP-FHLTLLNVCFSNLQAKSSS 425
Query: 247 TCSIMKYFNGPDKFGSTSEQLPDNFIDAAPLSPSGSESYST 287
SI +F K ST+ Q+P +D+ L S + S+ T
Sbjct: 426 KSSIASFFT--HKSPSTT-QIPSQQVDS-DLCESVASSHFT 462
Score = 58 (25.5 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 34/141 (24%), Positives = 55/141 (39%)
Query: 381 ILNFFKSGDL---SCSSGNHDTEHAETLLPLGDCLSESNKKQVNIPKERLDNSTGDCLSE 437
+++ FK GD + + D EH T + + VN+ N LS+
Sbjct: 552 LMSSFKKGDSFYRPADTEDVDPEHQPTFASRQPKTPKPCESAVNVCTNSASNPHE--LSQ 609
Query: 438 SNQNQVNIPKERLAEAATTSTSTDRCGSDQIQQRSESWKLRIEEIDPSVIDELPKEIQDE 497
+ + +IP E +E + S D S Q Q +DP V +LP ++Q E
Sbjct: 610 NFSSPQSIP-EFSSELVMVTESDDIPHSTQAIQPEVP-----ANVDPYVFSQLPADVQRE 663
Query: 498 IQA-WLR-------PSKRPHR 510
+ W + PSK H+
Sbjct: 664 LLTEWRQQRPVLKIPSKHSHK 684
Score = 43 (20.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 362 KSNQQEHKKSALKDKGASSILNFFK 386
KS+ +K++ K ++IL +FK
Sbjct: 684 KSSNSRDRKTSTKGSQCNNILKYFK 708
Score = 39 (18.8 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 491 PKEIQDEIQAWLRPSKRPHRVKQGFT 516
PK + + + PH + Q F+
Sbjct: 587 PKPCESAVNVCTNSASNPHELSQNFS 612
>ASPGD|ASPL0000012133 [details] [associations]
symbol:AN3909 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017956 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573
PROSITE:PS50173 SMART:SM00384 InterPro:IPR001357 GO:GO:0000287
GO:GO:0003684 GO:GO:0006281 EMBL:BN001302 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 EMBL:AACD01000064 GO:GO:0003887
eggNOG:COG0389 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 InterPro:IPR025527 Pfam:PF14377 KO:K03515
OrthoDB:EOG49PF6V RefSeq:XP_661513.1 ProteinModelPortal:Q5B6C1
STRING:Q5B6C1 EnsemblFungi:CADANIAT00004788 GeneID:2873330
KEGG:ani:AN3909.2 HOGENOM:HOG000216225 OMA:SAEVNWG Uniprot:Q5B6C1
Length = 1139
Score = 174 (66.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 51/159 (32%), Positives = 80/159 (50%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
+ +ET S GI N + AK+A KPA Q + +V + LP++ + +G L
Sbjct: 485 IKRETGCAVSVGIGGNILQAKVALRKAKPAGQFQLKPDAVLDFIGELPVQNLPGVGYSLS 544
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
L+ +LGV V D+ S +KL S G TG L + ARGI EV + KS +
Sbjct: 545 AKLE-DLGVKIVKDIRDLSREKLSSSLGPKTGAKLADYARGIDRTEVGNEVTRKSVSAEV 603
Query: 123 SFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRI 161
++ G R + T + ++ LCEEL RL +L + +++
Sbjct: 604 NW-GIRFV-TQDQAEDFMRSLCEELHRRLVENLMKGQQL 640
Score = 49 (22.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 483 DPSVIDELPKEIQDEIQAWLRP 504
DP+V+ ELP +I+ ++ A +P
Sbjct: 787 DPAVVAELPDDIRSKLVAQGKP 808
Score = 45 (20.9 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 481 EIDPSVIDELPKEIQDEIQAWL-RPS 505
++DP + ELP+++ E+ + +PS
Sbjct: 837 QLDPETLAELPEDVLAEVLGYYNQPS 862
Score = 40 (19.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 14/61 (22%), Positives = 26/61 (42%)
Query: 447 KERLAEAATTSTSTDRC-GSDQIQQRSESWKLRIEEIDPS---VIDEL--PKEIQDEIQA 500
+ RL T ST+ R +D+ + + + + + P L P +++DE A
Sbjct: 967 RSRLLHQRTASTTAPRTVPADRGHSQHQEKHINLPNLPPRPTFTSKRLSNPSDLRDEATA 1026
Query: 501 W 501
W
Sbjct: 1027 W 1027
>UNIPROTKB|F1MHR0 [details] [associations]
symbol:POLI "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:VFYELPE EMBL:DAAA02057088 IPI:IPI00687719
Ensembl:ENSBTAT00000012034 Uniprot:F1MHR0
Length = 701
Score = 151 (58.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 50/159 (31%), Positives = 76/159 (47%)
Query: 10 TCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLP-IKKMKQLGGKLGTSLQNE 68
T AG+A NK+LAKL SG+ KP QQT + S + L+ SL IK+M +G K L+
Sbjct: 183 TGCAGVASNKLLAKLVSGVFKPNQQTVLLPESSQELIHSLNHIKEMPGIGYKTTKRLE-A 241
Query: 69 LGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSFPGPR 128
LG+++V DL F L++ G + + ++ G V P+S SF +
Sbjct: 242 LGISSVRDLQTFPSKVLEKELGISVAQRIQKLSFGEDDSPVTPSGPPQSFSEEDSF---K 298
Query: 129 ALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
+ + + +L L R+C D R HT+ L
Sbjct: 299 KCSSEVEAKTKIEELLASLLNRVCQD----GRKPHTIRL 333
Score = 68 (29.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 469 QQRSESWKLRI-EEIDPSVIDELPKEIQDEIQA-WLRPSKRPH 509
+Q S K+ +IDP V ELP+E+Q E+ A W R H
Sbjct: 657 EQESPDEKIAFPSDIDPEVFYELPEEVQKELLADWKRTGSDFH 699
Score = 67 (28.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 405 LLPLGDCLSESNKKQVNIPKERLDNSTGDCLSESNQNQVNIPKERLAEAATTSTSTDRCG 464
L P S + K+ + +++ + D E+N++ +P R+ T + D
Sbjct: 417 LTPSLSTTSHAGKRSFKMKDCHMEDFSKD--KETNRDF--LPTGRIESTRTGESPPDPIN 472
Query: 465 SDQIQQRSE-SWKLRIEEIDPSVIDELPKEIQDEI 498
S + + +E L E+ID V +LP +IQ+EI
Sbjct: 473 SSKEKDSNEFPVSLLPEDIDQEVFKQLPVDIQEEI 507
>UNIPROTKB|J3KSW2 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI ProteinModelPortal:J3KSW2 Ensembl:ENST00000579434
Uniprot:J3KSW2
Length = 637
Score = 153 (58.9 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 50/159 (31%), Positives = 77/159 (48%)
Query: 10 TCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLP-IKKMKQLGGKLGTSLQNE 68
T AG+A NK+LAKL SG+ KP QQT + S + L+ SL IK++ +G K L+
Sbjct: 116 TGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLE-A 174
Query: 69 LGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSFPGPR 128
LG+ +V DL FS L++ G + + ++ G V P+S SF +
Sbjct: 175 LGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSF---K 231
Query: 129 ALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
+ ++ + +L L R+C D R HT+ L
Sbjct: 232 KCSSEVEAKNKIEELLASLLNRVCQD----GRKPHTVRL 266
Score = 59 (25.8 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 22/95 (23%), Positives = 41/95 (43%)
Query: 405 LLPLGDCLSESNKKQVNIPKERLDNSTGDCLSESNQNQVNIPKERLAEAATTSTSTDRCG 464
L+P S S K + +++ D E+N++ +P R+ T + D
Sbjct: 350 LMPSLSTTSRSGKHSFKMKDTHMEDFPKD--KETNRDF--LPSGRIESTRTRESPLDTTN 405
Query: 465 SDQIQQRSESWKLRIEE-IDPSVIDELPKEIQDEI 498
+ + +E + E +D V +LP +IQ+EI
Sbjct: 406 FSKEKDINEFPLCSLPEGVDQEVFKQLPVDIQEEI 440
Score = 58 (25.5 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 481 EIDPSVIDELPKEIQDEIQA-WLRPSKRPH 509
+IDP V ELP+ +Q E+ A W R H
Sbjct: 604 DIDPQVFYELPEAVQKELLAEWKRAGSDFH 633
>UNIPROTKB|Q9UNA4 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005654 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AY094607 EMBL:AC093462
EMBL:AF140501 EMBL:AL136670 EMBL:BC032662 EMBL:AF245438
IPI:IPI00296840 RefSeq:NP_009126.2 UniGene:Hs.438533 PDB:1T3N
PDB:1ZET PDB:2ALZ PDB:2DPI PDB:2DPJ PDB:2FLL PDB:2FLN PDB:2FLP
PDB:2KHU PDB:2KHW PDB:2KTF PDB:2L0F PDB:2L0G PDB:3EPG PDB:3EPI
PDB:3G6V PDB:3G6X PDB:3G6Y PDB:3GV5 PDB:3GV7 PDB:3GV8 PDB:3H40
PDB:3H4B PDB:3H4D PDB:3NGD PDB:3OSN PDB:3Q8P PDB:3Q8Q PDB:3Q8R
PDB:3Q8S PDB:4EBC PDB:4EBD PDB:4EBE PDB:4EYH PDB:4EYI PDB:4FS1
PDB:4FS2 PDBsum:1T3N PDBsum:1ZET PDBsum:2ALZ PDBsum:2DPI
PDBsum:2DPJ PDBsum:2FLL PDBsum:2FLN PDBsum:2FLP PDBsum:2KHU
PDBsum:2KHW PDBsum:2KTF PDBsum:2L0F PDBsum:2L0G PDBsum:3EPG
PDBsum:3EPI PDBsum:3G6V PDBsum:3G6X PDBsum:3G6Y PDBsum:3GV5
PDBsum:3GV7 PDBsum:3GV8 PDBsum:3H40 PDBsum:3H4B PDBsum:3H4D
PDBsum:3NGD PDBsum:3OSN PDBsum:3Q8P PDBsum:3Q8Q PDBsum:3Q8R
PDBsum:3Q8S PDBsum:4EBC PDBsum:4EBD PDBsum:4EBE PDBsum:4EYH
PDBsum:4EYI PDBsum:4FS1 PDBsum:4FS2 ProteinModelPortal:Q9UNA4
SMR:Q9UNA4 IntAct:Q9UNA4 MINT:MINT-1189678 STRING:Q9UNA4
PhosphoSite:Q9UNA4 DMDM:59798440 PaxDb:Q9UNA4 PRIDE:Q9UNA4
DNASU:11201 Ensembl:ENST00000579534 GeneID:11201 KEGG:hsa:11201
UCSC:uc002lfj.4 CTD:11201 GeneCards:GC18P051731 H-InvDB:HIX0014457
HGNC:HGNC:9182 HPA:HPA012000 MIM:605252 neXtProt:NX_Q9UNA4
PharmGKB:PA33502 HOGENOM:HOG000234325 HOVERGEN:HBG053634
InParanoid:Q9UNA4 KO:K03510 OMA:VFYELPE OrthoDB:EOG46T310
ChEMBL:CHEMBL5391 ChiTaRS:POLI EvolutionaryTrace:Q9UNA4
GenomeRNAi:11201 NextBio:42637 Bgee:Q9UNA4 CleanEx:HS_POLI
Genevestigator:Q9UNA4 GermOnline:ENSG00000101751 Uniprot:Q9UNA4
Length = 740
Score = 153 (58.9 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 50/159 (31%), Positives = 77/159 (48%)
Query: 10 TCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLP-IKKMKQLGGKLGTSLQNE 68
T AG+A NK+LAKL SG+ KP QQT + S + L+ SL IK++ +G K L+
Sbjct: 219 TGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLE-A 277
Query: 69 LGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSFPGPR 128
LG+ +V DL FS L++ G + + ++ G V P+S SF +
Sbjct: 278 LGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSF---K 334
Query: 129 ALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
+ ++ + +L L R+C D R HT+ L
Sbjct: 335 KCSSEVEAKNKIEELLASLLNRVCQD----GRKPHTVRL 369
Score = 59 (25.8 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 22/95 (23%), Positives = 41/95 (43%)
Query: 405 LLPLGDCLSESNKKQVNIPKERLDNSTGDCLSESNQNQVNIPKERLAEAATTSTSTDRCG 464
L+P S S K + +++ D E+N++ +P R+ T + D
Sbjct: 453 LMPSLSTTSRSGKHSFKMKDTHMEDFPKD--KETNRDF--LPSGRIESTRTRESPLDTTN 508
Query: 465 SDQIQQRSESWKLRIEE-IDPSVIDELPKEIQDEI 498
+ + +E + E +D V +LP +IQ+EI
Sbjct: 509 FSKEKDINEFPLCSLPEGVDQEVFKQLPVDIQEEI 543
Score = 58 (25.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 481 EIDPSVIDELPKEIQDEIQA-WLRPSKRPH 509
+IDP V ELP+ +Q E+ A W R H
Sbjct: 707 DIDPQVFYELPEAVQKELLAEWKRAGSDFH 736
>UNIPROTKB|Q74H50 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243231 "Geobacter
sulfurreducens PCA" [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 SUPFAM:SSF100879
HOGENOM:HOG000082710 HSSP:P96022 ProtClustDB:CLSK827609
RefSeq:NP_951105.1 ProteinModelPortal:Q74H50 GeneID:2688550
KEGG:gsu:GSU0043 PATRIC:22022827 OMA:ANRIILH
BioCyc:GSUL243231:GH27-86-MONOMER Uniprot:Q74H50
Length = 413
Score = 156 (60.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 48/142 (33%), Positives = 69/142 (48%)
Query: 10 TCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLGTSLQNEL 69
TCS GIA NK+LAKLAS M KP T + V L++ +PI+ + +G K L N L
Sbjct: 142 TCSIGIAPNKLLAKLASDMKKPDGLTIIRPEEVTRLMEIIPIQDLCGIGVKTRKQL-NSL 200
Query: 70 GVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEV-QARLLPKSHGSGKSFPGPR 128
G+ T G+L +F + L+ ++G G L + +GI V + G S R
Sbjct: 201 GIQTCGELGRFPVEILRRTFGV-IGDRLHLMGKGIDDSPVVPVEEAEEVKSVGHSMTLDR 259
Query: 129 ALKTVASVQHWLNQLCEELSER 150
L + +L QL E + R
Sbjct: 260 DLTARRDILKYLLQLSEMVGRR 281
>TIGR_CMR|GSU_0043 [details] [associations]
symbol:GSU_0043 "ImpB/MucB/SamB family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0009650 "UV protection"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 SUPFAM:SSF100879
HOGENOM:HOG000082710 HSSP:P96022 ProtClustDB:CLSK827609
RefSeq:NP_951105.1 ProteinModelPortal:Q74H50 GeneID:2688550
KEGG:gsu:GSU0043 PATRIC:22022827 OMA:ANRIILH
BioCyc:GSUL243231:GH27-86-MONOMER Uniprot:Q74H50
Length = 413
Score = 156 (60.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 48/142 (33%), Positives = 69/142 (48%)
Query: 10 TCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLGTSLQNEL 69
TCS GIA NK+LAKLAS M KP T + V L++ +PI+ + +G K L N L
Sbjct: 142 TCSIGIAPNKLLAKLASDMKKPDGLTIIRPEEVTRLMEIIPIQDLCGIGVKTRKQL-NSL 200
Query: 70 GVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEV-QARLLPKSHGSGKSFPGPR 128
G+ T G+L +F + L+ ++G G L + +GI V + G S R
Sbjct: 201 GIQTCGELGRFPVEILRRTFGV-IGDRLHLMGKGIDDSPVVPVEEAEEVKSVGHSMTLDR 259
Query: 129 ALKTVASVQHWLNQLCEELSER 150
L + +L QL E + R
Sbjct: 260 DLTARRDILKYLLQLSEMVGRR 281
>UNIPROTKB|Q8EHU9 [details] [associations]
symbol:dinB "DNA polymerase IV" species:211586 "Shewanella
oneidensis MR-1" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005737 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003887
eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:MNILNEY
ProtClustDB:PRK02406 RefSeq:NP_716739.1 HSSP:Q9UHC5
ProteinModelPortal:Q8EHU9 GeneID:1168948 KEGG:son:SO_1114
PATRIC:23521872 Uniprot:Q8EHU9
Length = 357
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 46/149 (30%), Positives = 74/149 (49%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
+L ET T SAG+A K LAK+AS +NKP Q +P V + +L ++++ +G K+
Sbjct: 130 ILAETGLTASAGVAPVKFLAKVASDLNKPNGQYVIPPDKVPEFIRTLSLRQIPGVG-KVT 188
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
+ LG+ T GD+ + + +L +G G L A+GI + KS G
Sbjct: 189 AEKLSSLGLNTCGDVQTYPKQELITRFG-KFGAVLIERAQGIDDRGLSVSRERKSVGVET 247
Query: 123 SFPGPRALKTVASVQHWLNQLCEELSERL 151
+ + + T+ Q + L +ELS RL
Sbjct: 248 TLA--QDIYTLEQCQQVMPGLIQELSTRL 274
>TIGR_CMR|SO_1114 [details] [associations]
symbol:SO_1114 "DNA-damage-inducible protein P"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 OMA:MNILNEY ProtClustDB:PRK02406
RefSeq:NP_716739.1 HSSP:Q9UHC5 ProteinModelPortal:Q8EHU9
GeneID:1168948 KEGG:son:SO_1114 PATRIC:23521872 Uniprot:Q8EHU9
Length = 357
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 46/149 (30%), Positives = 74/149 (49%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
+L ET T SAG+A K LAK+AS +NKP Q +P V + +L ++++ +G K+
Sbjct: 130 ILAETGLTASAGVAPVKFLAKVASDLNKPNGQYVIPPDKVPEFIRTLSLRQIPGVG-KVT 188
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
+ LG+ T GD+ + + +L +G G L A+GI + KS G
Sbjct: 189 AEKLSSLGLNTCGDVQTYPKQELITRFG-KFGAVLIERAQGIDDRGLSVSRERKSVGVET 247
Query: 123 SFPGPRALKTVASVQHWLNQLCEELSERL 151
+ + + T+ Q + L +ELS RL
Sbjct: 248 TLA--QDIYTLEQCQQVMPGLIQELSTRL 274
>MGI|MGI:1347081 [details] [associations]
symbol:Poli "polymerase (DNA directed), iota" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 MGI:MGI:1347081 GO:GO:0005634 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 GO:GO:0003887
eggNOG:COG0389 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 CTD:11201
HOGENOM:HOG000234325 HOVERGEN:HBG053634 KO:K03510 OrthoDB:EOG46T310
EMBL:AF151691 EMBL:AY515316 EMBL:AY515317 EMBL:BC082278
IPI:IPI00553425 IPI:IPI00985545 RefSeq:NP_001129562.1
UniGene:Mm.244352 PDB:2KWU PDB:2KWV PDB:3AI4 PDBsum:2KWU
PDBsum:2KWV PDBsum:3AI4 ProteinModelPortal:Q6R3M4 SMR:Q6R3M4
IntAct:Q6R3M4 STRING:Q6R3M4 PhosphoSite:Q6R3M4 PRIDE:Q6R3M4
Ensembl:ENSMUST00000043286 Ensembl:ENSMUST00000161542 GeneID:26447
KEGG:mmu:26447 UCSC:uc008foi.2 UCSC:uc008fok.2 InParanoid:Q6R3M4
BindingDB:Q6R3M4 ChEMBL:CHEMBL5159 NextBio:304545 Bgee:Q6R3M4
CleanEx:MM_POLI Genevestigator:Q6R3M4 GermOnline:ENSMUSG00000038425
Uniprot:Q6R3M4
Length = 717
Score = 136 (52.9 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 48/159 (30%), Positives = 74/159 (46%)
Query: 10 TCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLP-IKKMKQLGGKLGTSLQNE 68
T AG+A NK+LAKL SG+ KP QQT + S + L+ SL IK++ +G K L+
Sbjct: 194 TGCAGVAPNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKRLE-V 252
Query: 69 LGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSFPGPR 128
LG+ +V DL F L++ G + ++ G V P+S +F +
Sbjct: 253 LGINSVHDLQTFPIKTLEKELGIAIAQRIQQLSFGEDKSPVTPSGPPQSFSEEDTF---K 309
Query: 129 ALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
+ + + +L L R+C D R HT+ L
Sbjct: 310 KCSSEVEAKAKIEELLSSLLTRVCQD----GRKPHTVRL 344
Score = 68 (29.0 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 481 EIDPSVIDELPKEIQDEIQA-WLRP-SKRP--HR 510
+IDP V ELP+E+Q E+ A W R + RP HR
Sbjct: 684 DIDPQVFYELPEEVQKELMAEWERAGAARPSAHR 717
Score = 63 (27.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 19/72 (26%), Positives = 28/72 (38%)
Query: 428 DNSTGDCLSESNQNQVNIPKERLAEAATTSTSTDR-CGSDQIQQRSESWKLRIEEIDPSV 486
D T D E N +P R+ T + D C + + E +D V
Sbjct: 445 DTHTEDSHKEKEANWDCLPSRRIESTGTGESPLDATCFPKEKDTSDLPLQALPEGVDQEV 504
Query: 487 IDELPKEIQDEI 498
+LP +IQ+EI
Sbjct: 505 FKQLPADIQEEI 516
Score = 37 (18.1 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 269 DNFIDAAPLSPSGSESYSTLNSTELQN 295
D+ A S G ES+ L S EL +
Sbjct: 648 DSHKQTATASHQGLESHQGLESRELDS 674
>UNIPROTKB|F1NCT7 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
EMBL:AADN02067159 EMBL:AADN02067160 EMBL:AADN02067161
IPI:IPI00680100 Ensembl:ENSGALT00000032848 ArrayExpress:F1NCT7
Uniprot:F1NCT7
Length = 543
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 48/170 (28%), Positives = 81/170 (47%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTV-PF-SSVKGLLDSLPIKKMKQLGG 59
++ ++T+ T SAGIA N MLAK+ S NKP Q + P +V + LPI+K+ +G
Sbjct: 294 RIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQCRISPERQAVLDFIKDLPIRKVPGIG- 352
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTW--LWNIARGISGEEVQARLLPKS 117
K+ + LG+ T +L + + S F+ +W +I+ G+ ++
Sbjct: 353 KVTEKMLKALGIVTCSELY---QQRALLSLLFSEASWRSFLDISLGLGSTHLE------K 403
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
G KS R ++ + + LC+EL L DL++ T+TL
Sbjct: 404 DGERKSMSTERTFSEISKAEDQYS-LCQELCRELAQDLQKEGLKGKTVTL 452
>UNIPROTKB|P63985 [details] [associations]
symbol:dinB1 "DNA polymerase IV 1" species:1773
"Mycobacterium tuberculosis" [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005829 GO:GO:0005886 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:BX842577 GO:GO:0003887 PIR:F70760
RefSeq:NP_216053.2 RefSeq:NP_336041.2 RefSeq:YP_006514925.1
ProteinModelPortal:P63985 SMR:P63985
EnsemblBacteria:EBMYCT00000000713 EnsemblBacteria:EBMYCT00000071148
GeneID:13320135 GeneID:886414 GeneID:924358 KEGG:mtc:MT1589
KEGG:mtu:Rv1537 KEGG:mtv:RVBD_1537 PATRIC:18125261
TubercuList:Rv1537 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
OMA:LKKADMS ProtClustDB:PRK03348 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 Uniprot:P63985
Length = 468
Score = 150 (57.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 47/166 (28%), Positives = 74/166 (44%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKL 61
+V ET S G K +AK+ASG+ KP V + + LL LP++++ +G
Sbjct: 132 RVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRLWGIGPVA 191
Query: 62 GTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSG 121
L + LG+ T+G L S+ + G G L +ARGI V R K +
Sbjct: 192 EEKL-HRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEAKQISAE 250
Query: 122 KSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
+F L T+ + ++ + E +RL D R A T+T+
Sbjct: 251 STFAVD--LTTMEQLHEAIDSIAEHAHQRLLRD----GRGARTITV 290
>UNIPROTKB|F1MAB3 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734 RGD:620058
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 IPI:IPI00372895 Ensembl:ENSRNOT00000040799
ArrayExpress:F1MAB3 Uniprot:F1MAB3
Length = 711
Score = 152 (58.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 51/170 (30%), Positives = 83/170 (48%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKP-AQQTTVPF-SSVKGLLDSLPIKKMKQLGG 59
++ ++T T SAGIA N MLAK+ S NKP Q VP S+V + LPI+K+ +G
Sbjct: 163 RIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQIVPSRSAVMDFIKDLPIRKVSGIG- 221
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLW--NIARGISGEEVQARLLPKS 117
K+ + LG+ T +L + + S F+ +W + ++A G+ ++ AR
Sbjct: 222 KVTEKMLLALGIVTCTELY---QQRALLSLLFSESSWHYFLHVALGLGSTDL-AR----- 272
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
G KS R + + + LC+EL L DL++ T+T+
Sbjct: 273 DGERKSMSVERTFSEINKTEEQYS-LCQELCTELAHDLQKEGLKGRTVTI 321
Score = 46 (21.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 262 STSEQLPDNFIDAAPLSPSGSESYSTLN 289
S E PD+ + PLSP+ +E+ STL+
Sbjct: 581 SEGEGYPDSQGKSCPLSPA-NETVSTLS 607
>POMBASE|SPBC1347.01c [details] [associations]
symbol:rev1 "deoxycytidyl transferase Rev1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000287 "magnesium ion
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005819 "spindle" evidence=IDA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0017125
"deoxycytidyl transferase activity" evidence=ISO] [GO:0043504
"mitochondrial DNA repair" evidence=IC] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISO] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 PomBase:SPBC1347.01c Pfam:PF00533 GO:GO:0005739
GO:GO:0005730 GO:GO:0005819 GO:GO:0000287 GO:GO:0003684
GO:GO:0006260 EMBL:CU329671 GenomeReviews:CU329671_GR SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887 GO:GO:0043504
eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879 GO:GO:0017125
KO:K03515 RefSeq:NP_596693.2 ProteinModelPortal:O94623
IntAct:O94623 STRING:O94623 EnsemblFungi:SPBC1347.01c.1
GeneID:2539723 KEGG:spo:SPBC1347.01c OMA:FHIDFDC OrthoDB:EOG49PF6V
NextBio:20800875 Uniprot:O94623
Length = 935
Score = 150 (57.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 36/103 (34%), Positives = 55/103 (53%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKL 61
QV ++T S GI N +LA+LA KP ++ +V +L L ++ + +G
Sbjct: 404 QVREKTNCEVSVGIGPNVLLARLALRKAKPHNVYSLSIENVFDVLSPLSVQDLPGVGSSQ 463
Query: 62 GTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGI 104
L N GV T+G L + + LQE++G N G L+NI+RGI
Sbjct: 464 AQKLFNLYGVRTIGQLQRIEKFNLQETFGVNYGLHLYNISRGI 506
Score = 51 (23.0 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 481 EIDPSVIDELPKEIQDEIQAWLRPSKR 507
+I S + +LP +Q +IQ LR KR
Sbjct: 695 QISSSALAQLPPSMQSDIQQQLRLQKR 721
Score = 47 (21.6 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 436 SESNQNQVNIPKERLAEAATTSTSTDRCGSDQIQQRSESWKL-RIEE---------IDPS 485
+E N N +RL+ + D G +I+Q + KL +I + +D
Sbjct: 744 NEVNDNHEIAMNKRLSLKSHADNKIDERGKKKIRQENAFDKLLQISKKSKTINKPNVDYL 803
Query: 486 VIDELPKEIQDEI 498
+ ELPK++Q +I
Sbjct: 804 TLKELPKDLQKQI 816
Score = 46 (21.3 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 415 SNKKQVNIPKERLDNSTGDCLSESNQNQVNIPKERLAEAATTSTSTDRCGSDQIQQRSES 474
S KKQ++ PK L ST L S+Q I LA+ + S + Q++ + S
Sbjct: 673 SQKKQLS-PK--LIPSTPYDLPSSSQ----ISSSALAQLPPSMQSDIQ---QQLRLQKRS 722
Query: 475 WKLRIEEIDPSVIDELPKEIQDEI 498
++DP + ELP I++E+
Sbjct: 723 ITEYPSQLDPLFMVELPTPIRNEV 746
>UNIPROTKB|E2RAS5 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0003684
GO:GO:0003887 GO:GO:0006297 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:TCTELYQ EMBL:AAEX03002157 Ensembl:ENSCAFT00000014935
Uniprot:E2RAS5
Length = 871
Score = 153 (58.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 49/170 (28%), Positives = 79/170 (46%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKP-AQQTTVPF-SSVKGLLDSLPIKKMKQLGG 59
++ ++T T SAGIA N MLAK+ S NKP Q +P +V + LPI+K+ +G
Sbjct: 308 RIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQVLPNRQAVMDFIKDLPIRKVSGIG- 366
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTW--LWNIARGISGEEVQARLLPKS 117
K+ + LG+ T +L + + S F+ +W +I+ G+ L
Sbjct: 367 KVTEKMLKALGIITCTELY---QQRALLSLLFSETSWHHFLHISLGLGS----THLASSR 419
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
G KS R ++ + N LC+EL L DL++ T+T+
Sbjct: 420 DGERKSMSVERTFSEISKAEEQYN-LCQELCSELAQDLQKEGLKGRTVTI 468
>UNIPROTKB|Q71Y46 [details] [associations]
symbol:dinB "DNA polymerase IV" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 OMA:MNILNEY ProtClustDB:PRK02406
RefSeq:YP_014591.1 ProteinModelPortal:Q71Y46 STRING:Q71Y46
GeneID:2798339 KEGG:lmf:LMOf2365_1998 PATRIC:20325291
Uniprot:Q71Y46
Length = 356
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 49/160 (30%), Positives = 75/160 (46%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
+ +E T SAG++ NK +AK+AS KPA T V + L+ +P+ K +G K+
Sbjct: 133 IYQELGLTASAGVSFNKFIAKIASDFKKPAGITVVTPEEAEAFLEQIPVTKFYGVG-KVT 191
Query: 63 TSLQNELGVTTVGDLLKFSE-DKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSG 121
+ LG+ T DL K+SE D ++E + G L+ RG S V KS G
Sbjct: 192 AEKLHRLGIETGADLKKWSEWDLIRELH--KHGYHLYRHVRGRSNNIVNPHRDRKSVGKE 249
Query: 122 KSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRI 161
+F L + Q L Q +++ ERL + K +
Sbjct: 250 TTFEF-NVLDSRVLEQS-LMQFAKKVEERLIKLQKHGKTV 287
>UNIPROTKB|P63987 [details] [associations]
symbol:dinB2 "DNA polymerase IV 2" species:1773
"Mycobacterium tuberculosis" [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005829 GO:GO:0005886 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:BX842581 GO:GO:0003887 eggNOG:COG0389
HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
SUPFAM:SSF100879 PIR:A70649 RefSeq:NP_217572.1 RefSeq:NP_337660.1
RefSeq:YP_006516517.1 ProteinModelPortal:P63987 SMR:P63987
EnsemblBacteria:EBMYCT00000003933 EnsemblBacteria:EBMYCT00000069414
GeneID:13317860 GeneID:887519 GeneID:923303 KEGG:mtc:MT3142
KEGG:mtu:Rv3056 KEGG:mtv:RVBD_3056 PATRIC:18128668
TubercuList:Rv3056 OMA:IIAHIDI ProtClustDB:PRK03352 Uniprot:P63987
Length = 346
Score = 146 (56.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 43/164 (26%), Positives = 79/164 (48%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
+L +T +CS GI+ NK AK+A+G+ KPA + ++ ++ ++ + +G K
Sbjct: 136 ILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEALWGVGPKTT 195
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARL-LPKSHGSG 121
L +LG+ TV L L ++G T WL +A+G EV A+ +P+S
Sbjct: 196 KRLA-KLGINTVYQLAHTDSGLLMSTFGPRTALWLL-LAKGGGDTEVSAQAWVPRSRSHA 253
Query: 122 KSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTL 165
+FP R L + ++ + +L + + + R+A T+
Sbjct: 254 VTFP--RDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTV 295
>UNIPROTKB|Q9KPS5 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0003887
eggNOG:COG0389 KO:K02346 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 OMA:QSLGMRT ProtClustDB:PRK02406
PIR:G82093 RefSeq:NP_231918.1 ProteinModelPortal:Q9KPS5
DNASU:2613209 GeneID:2613209 KEGG:vch:VC2287 PATRIC:20083613
Uniprot:Q9KPS5
Length = 360
Score = 146 (56.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 47/150 (31%), Positives = 71/150 (47%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
+ +E T SAG+A K LAK+AS +NKP V V+ ++DSLP++K+ +G K+
Sbjct: 134 IWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEKIPGVG-KVA 192
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
++ G+ D+ + KL +G G LW + GI EV KS G
Sbjct: 193 LEKLHQAGLYVGADVRRADYRKLLHQFG-RLGASLWKKSHGIDEREVVTERERKSVGVEY 251
Query: 123 SFPGPRALKTVASVQHWLNQ-LCEELSERL 151
+F + + T + Q L EL RL
Sbjct: 252 TFS--QNISTFQECWQVIEQKLYPELDARL 279
>TIGR_CMR|VC_2287 [details] [associations]
symbol:VC_2287 "DNA-damage-inducible protein P" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281
GO:GO:0003887 eggNOG:COG0389 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:QSLGMRT
ProtClustDB:PRK02406 PIR:G82093 RefSeq:NP_231918.1
ProteinModelPortal:Q9KPS5 DNASU:2613209 GeneID:2613209
KEGG:vch:VC2287 PATRIC:20083613 Uniprot:Q9KPS5
Length = 360
Score = 146 (56.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 47/150 (31%), Positives = 71/150 (47%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
+ +E T SAG+A K LAK+AS +NKP V V+ ++DSLP++K+ +G K+
Sbjct: 134 IWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEKIPGVG-KVA 192
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
++ G+ D+ + KL +G G LW + GI EV KS G
Sbjct: 193 LEKLHQAGLYVGADVRRADYRKLLHQFG-RLGASLWKKSHGIDEREVVTERERKSVGVEY 251
Query: 123 SFPGPRALKTVASVQHWLNQ-LCEELSERL 151
+F + + T + Q L EL RL
Sbjct: 252 TFS--QNISTFQECWQVIEQKLYPELDARL 279
>UNIPROTKB|Q74CQ6 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243231 "Geobacter
sulfurreducens PCA" [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082710
InterPro:IPR025188 Pfam:PF13438 HSSP:Q97W02 RefSeq:NP_952667.1
ProteinModelPortal:Q74CQ6 GeneID:2687433 KEGG:gsu:GSU1616
PATRIC:22026081 OMA:FETHTRA ProtClustDB:CLSK827609
BioCyc:GSUL243231:GH27-1576-MONOMER Uniprot:Q74CQ6
Length = 409
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 39/100 (39%), Positives = 53/100 (53%)
Query: 10 TCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLGTSLQNEL 69
TCS GIA NK+LAKLAS M KP T +P +V L+ + PI+ + +G L+ L
Sbjct: 139 TCSIGIAPNKLLAKLASDMQKPDGLTIIPPENVASLMKTTPIRSLCGIGPSTEQRLKY-L 197
Query: 70 GVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEV 109
G++T DL FS L +G G L + +GI V
Sbjct: 198 GISTCNDLGHFSSKILTRHFGA-MGARLKQMGQGIDDSPV 236
>TIGR_CMR|GSU_1616 [details] [associations]
symbol:GSU_1616 "ImpB/MucB/SamB family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0009650 "UV protection"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082710
InterPro:IPR025188 Pfam:PF13438 HSSP:Q97W02 RefSeq:NP_952667.1
ProteinModelPortal:Q74CQ6 GeneID:2687433 KEGG:gsu:GSU1616
PATRIC:22026081 OMA:FETHTRA ProtClustDB:CLSK827609
BioCyc:GSUL243231:GH27-1576-MONOMER Uniprot:Q74CQ6
Length = 409
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 39/100 (39%), Positives = 53/100 (53%)
Query: 10 TCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLGTSLQNEL 69
TCS GIA NK+LAKLAS M KP T +P +V L+ + PI+ + +G L+ L
Sbjct: 139 TCSIGIAPNKLLAKLASDMQKPDGLTIIPPENVASLMKTTPIRSLCGIGPSTEQRLKY-L 197
Query: 70 GVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEV 109
G++T DL FS L +G G L + +GI V
Sbjct: 198 GISTCNDLGHFSSKILTRHFGA-MGARLKQMGQGIDDSPV 236
>UNIPROTKB|G3V8W7 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IEA]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR006642
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734 RGD:620058
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 EMBL:CH473955
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:TCTELYQ UniGene:Rn.92419 Ensembl:ENSRNOT00000033952
Uniprot:G3V8W7
Length = 851
Score = 152 (58.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 51/170 (30%), Positives = 83/170 (48%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKP-AQQTTVPF-SSVKGLLDSLPIKKMKQLGG 59
++ ++T T SAGIA N MLAK+ S NKP Q VP S+V + LPI+K+ +G
Sbjct: 299 RIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQIVPSRSAVMDFIKDLPIRKVSGIG- 357
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLW--NIARGISGEEVQARLLPKS 117
K+ + LG+ T +L + + S F+ +W + ++A G+ ++ AR
Sbjct: 358 KVTEKMLLALGIVTCTELY---QQRALLSLLFSESSWHYFLHVALGLGSTDL-AR----- 408
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
G KS R + + + LC+EL L DL++ T+T+
Sbjct: 409 DGERKSMSVERTFSEINKTEEQYS-LCQELCTELAHDLQKEGLKGRTVTI 457
Score = 46 (21.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 262 STSEQLPDNFIDAAPLSPSGSESYSTLN 289
S E PD+ + PLSP+ +E+ STL+
Sbjct: 717 SEGEGYPDSQGKSCPLSPA-NETVSTLS 743
>TAIR|locus:2031050 [details] [associations]
symbol:AT1G49980 species:3702 "Arabidopsis thaliana"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006281 "DNA repair"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 EMBL:CP002684 GO:GO:0016020 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879
KO:K03511 OMA:VHVDCDA HOGENOM:HOG000082709 EMBL:AY508701
IPI:IPI00540157 RefSeq:NP_175420.3 UniGene:At.43723 HSSP:Q97W02
ProteinModelPortal:Q6JDV7 SMR:Q6JDV7 EnsemblPlants:AT1G49980.1
GeneID:841422 KEGG:ath:AT1G49980 TAIR:At1g49980 InParanoid:Q6JDV7
PhylomeDB:Q6JDV7 ProtClustDB:CLSN2681525 Genevestigator:Q6JDV7
Uniprot:Q6JDV7
Length = 671
Score = 150 (57.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 47/167 (28%), Positives = 82/167 (49%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPF--SSVKGLLDSLPIKKMKQLGGK 60
V ET TCSAG+A N++LAK+ S +NKP Q + S+V + LP++K+ +G
Sbjct: 228 VYSETGLTCSAGVAANRLLAKVCSDINKPNGQFVLQNDRSTVMTFVSFLPVRKIGGIGKV 287
Query: 61 LGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGS 120
L++ LG+ T ++++ L + ++ + ++ G+ G P+ S
Sbjct: 288 TEHILKDALGIKTCEEMVQ-KGSLLYALFSQSSADFFLSVGLGLGGTNT-----PQVR-S 340
Query: 121 GKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
KS R + ++L +EL+E L D+++ A TLTL
Sbjct: 341 RKSISSERTFAATGDERLLYSKL-DELAEMLSHDMKKEGLTARTLTL 386
>ZFIN|ZDB-GENE-081105-180 [details] [associations]
symbol:si:dkey-57a22.7 "si:dkey-57a22.7"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 ZFIN:ZDB-GENE-081105-180
GO:GO:0000287 GO:GO:0003684 GO:GO:0006281 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887 eggNOG:COG0389
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 KO:K03515
HOGENOM:HOG000154094 HOVERGEN:HBG054140 EMBL:CR392332 EMBL:CR536604
IPI:IPI00862463 RefSeq:NP_001116772.1 UniGene:Dr.61598 SMR:B0UY97
Ensembl:ENSDART00000134915 GeneID:570043 KEGG:dre:570043
NextBio:20889959 Uniprot:B0UY97
Length = 1268
Score = 149 (57.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 43/149 (28%), Positives = 74/149 (49%)
Query: 4 LKETEFTC-SAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
+KE C S G++ N +LA++A+ KP Q + V + P+ + +G +
Sbjct: 637 IKEKTGCCASVGMSSNILLARMATRKAKPKGQYLLRSEEVDDFIRDQPVSSLPGVGRSMS 696
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
+ L + LGV+T GDL + S +LQ +G TG L+ RG+ V++ KS +
Sbjct: 697 SKLTS-LGVSTCGDLQQLSLSQLQREFGPRTGQTLFRFCRGLDDRPVRSEKERKSVSAEM 755
Query: 123 SFPGPRALKTVASVQHWLNQLCEELSERL 151
++ R + V + +LN L E+ +RL
Sbjct: 756 NY-NIRFTQ-VEEAESFLNNLSMEVQKRL 782
Score = 53 (23.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 481 EIDPSVIDELPKEIQDEI 498
++DP V LP+E+Q+E+
Sbjct: 1053 QVDPDVFAALPRELQEEL 1070
Score = 53 (23.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 481 EIDPSVIDELPKEIQDEIQAWLRPSKRPHRVKQGFTIADYFSPSK 525
++DPSV+ LP +I+ +++ R +R +Q T + Y +P +
Sbjct: 978 QVDPSVLKALPIDIRRQVEETWR-----YREEQPSTSSHYSTPPR 1017
>UNIPROTKB|J9P5L3 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0003684 GO:GO:0006281
GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 KO:K03511 CTD:51426
EMBL:AAEX03002157 RefSeq:XP_536321.2 Ensembl:ENSCAFT00000046862
GeneID:479180 KEGG:cfa:479180 Uniprot:J9P5L3
Length = 861
Score = 150 (57.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 50/170 (29%), Positives = 81/170 (47%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKP-AQQTTVPF-SSVKGLLDSLPIKKMKQLGG 59
++ ++T T SAGIA N MLAK+ S NKP Q +P +V + LPI+K+ +G
Sbjct: 300 RIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQVLPNRQAVMDFIKDLPIRKVSGIG- 358
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTW--LWNIARGISGEEVQARLLPKS 117
K+ + LG+ T +L + + S F+ +W +I+ G+ + AR
Sbjct: 359 KVTEKMLKALGIITCTELY---QQRALLSLLFSETSWHHFLHISLGLGSTHL-AR----- 409
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
G KS R ++ + N LC+EL L DL++ T+T+
Sbjct: 410 DGERKSMSVERTFSEISKAEEQYN-LCQELCSELAQDLQKEGLKGRTVTI 458
>FB|FBgn0037554 [details] [associations]
symbol:DNApol-iota "DNApol-iota" species:7227 "Drosophila
melanogaster" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IMP;IDA;NAS] [GO:0019985 "translesion synthesis"
evidence=ISS;NAS;IDA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
EMBL:AE014297 GO:GO:0003684 GO:GO:0003887 GO:GO:0019985
eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879 HSSP:P96022
GeneTree:ENSGT00530000062942 KO:K03510 EMBL:AY051762 EMBL:AB049434
RefSeq:NP_649772.1 RefSeq:NP_731214.1 UniGene:Dm.9926 SMR:Q9VHV1
IntAct:Q9VHV1 MINT:MINT-308720 EnsemblMetazoa:FBtr0081797
EnsemblMetazoa:FBtr0081798 GeneID:40965 KEGG:dme:Dmel_CG7602
UCSC:CG7602-RA CTD:40965 FlyBase:FBgn0037554 InParanoid:Q9VHV1
OMA:CCAGIAY OrthoDB:EOG42RBPH GenomeRNAi:40965 NextBio:821498
Uniprot:Q9VHV1
Length = 737
Score = 147 (56.8 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 44/146 (30%), Positives = 76/146 (52%)
Query: 10 TCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSL-PIKKMKQLGGKLGTSLQNE 68
TC AGIA+NK+LAKL ++P QQT + + + + L +K++ +G K L E
Sbjct: 182 TCCAGIAYNKLLAKLVGSSHEPNQQTVLVSTYAEQFMRELGDLKRVTGIGQKTQCLLL-E 240
Query: 69 LGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSFPGPR 128
G+++V L + D +++ +GF T T L ++A G V+ PK+ G + P
Sbjct: 241 AGMSSVEQLQQCDMDVMRKKFGFETATRLRDLAFGRDTSLVRPSGKPKTIGMEDACK-PI 299
Query: 129 ALKTVASVQHWLNQLCEELSERLCSD 154
+++T V+ L + L E++ D
Sbjct: 300 SVRT--DVEERFRMLLKRLVEQVAED 323
Score = 47 (21.6 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 482 IDPSVIDELPKEIQDE-IQAW 501
+D V ELP E+Q E I +W
Sbjct: 669 VDAEVFKELPVELQTELIASW 689
>UNIPROTKB|F1STE9 [details] [associations]
symbol:REV1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0003887 GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GO:GO:0017125 GeneTree:ENSGT00530000062942 OMA:YRFCRGL
EMBL:FP326722 EMBL:CU972417 EMBL:CU694748
Ensembl:ENSSSCT00000008958 Uniprot:F1STE9
Length = 1253
Score = 137 (53.3 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 1 MQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGK 60
M++ +T+ S GI N +LA++A+ KP Q + V + + + +G
Sbjct: 595 MEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDDFIRGQLVTNLPGVGRS 654
Query: 61 LGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGS 120
+ + L + LG+ T GDL + KLQ+ +G TG L+ RG+ V+ KS +
Sbjct: 655 MESKLMS-LGIRTCGDLQYMTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRTEKERKSVSA 713
Query: 121 GKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRI 161
++ G R + + +L L EE+ RL + + KR+
Sbjct: 714 EINY-GIRFTQP-KEAEAFLLSLSEEIQRRLETAGVKGKRL 752
Score = 62 (26.9 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 481 EIDPSVIDELPKEIQDEI-QAWLRPSKRPHRVKQ 513
++DPSV++ LP ++++++ Q P PH K+
Sbjct: 938 QLDPSVLEALPPDLREQVEQVCAVPQAEPHGDKK 971
Score = 52 (23.4 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 481 EIDPSVIDELPKEIQDEIQA 500
++DP V LP E+Q E++A
Sbjct: 1016 QVDPEVFAALPAELQKELKA 1035
>UNIPROTKB|F1NCT8 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
SMART:SM00734 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 EMBL:AADN02067159
EMBL:AADN02067160 EMBL:AADN02067161 IPI:IPI00680917
Ensembl:ENSGALT00000032847 ArrayExpress:F1NCT8 Uniprot:F1NCT8
Length = 862
Score = 151 (58.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 48/170 (28%), Positives = 81/170 (47%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTV-PF-SSVKGLLDSLPIKKMKQLGG 59
++ ++T+ T SAGIA N MLAK+ S NKP Q + P +V + LPI+K+ +G
Sbjct: 289 RIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQCRISPERQAVLDFIKDLPIRKVPGIG- 347
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTW--LWNIARGISGEEVQARLLPKS 117
K+ + LG+ T +L + + S F+ +W +I+ G+ ++
Sbjct: 348 KVTEKMLKALGIVTCSELY---QQRALLSLLFSEASWRSFLDISLGLGSTHLE------K 398
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
G KS R ++ + + LC+EL L DL++ T+TL
Sbjct: 399 DGERKSMSTERTFSEISKAEDQYS-LCQELCRELAQDLQKEGLKGKTVTL 447
Score = 41 (19.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 22/111 (19%), Positives = 42/111 (37%)
Query: 411 CLSESNKKQVNIPKERLDNSTGDCLSESN-QNQVNIPKERLAEAATTSTSTDRCGSDQIQ 469
C E + + E ++ +CL+ S ++ V I K L+ T C ++ I
Sbjct: 615 CFEEQSSSNL----EEINRHVDECLAGSLVEDTVEISKNDLSRE-NTFNFLSHCKNENID 669
Query: 470 QRSESWKLRIEEIDPSVIDELPKEIQDEIQAWLR-PSKRPHRVKQGFTIAD 519
E+ ++ S + + + S++PHR KQ + D
Sbjct: 670 DCKENVTDQLAGTGQSASTSENSSGNSRDKKFTQIVSEKPHREKQPGDLID 720
>UNIPROTKB|Q8AWW1 [details] [associations]
symbol:DINB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] [GO:0019985 "translesion synthesis" evidence=TAS]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR006642
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734
GO:GO:0005654 GO:GO:0003684 Reactome:REACT_115612 GO:GO:0003887
GO:GO:0006297 GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 HSSP:P96022
GeneTree:ENSGT00530000062942 HOGENOM:HOG000082711 KO:K03511
CTD:51426 HOVERGEN:HBG101212 OMA:TCTELYQ EMBL:AADN02067159
EMBL:AADN02067160 EMBL:AADN02067161 EMBL:AY118271 IPI:IPI00586140
RefSeq:NP_989514.1 UniGene:Gga.42393 SMR:Q8AWW1 STRING:Q8AWW1
Ensembl:ENSGALT00000024123 GeneID:374003 KEGG:gga:374003
InParanoid:Q8AWW1 NextBio:20813531 Uniprot:Q8AWW1
Length = 867
Score = 151 (58.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 48/170 (28%), Positives = 81/170 (47%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTV-PF-SSVKGLLDSLPIKKMKQLGG 59
++ ++T+ T SAGIA N MLAK+ S NKP Q + P +V + LPI+K+ +G
Sbjct: 293 RIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQCRISPERQAVLDFIKDLPIRKVPGIG- 351
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTW--LWNIARGISGEEVQARLLPKS 117
K+ + LG+ T +L + + S F+ +W +I+ G+ ++
Sbjct: 352 KVTEKMLKALGIVTCSELY---QQRALLSLLFSEASWRSFLDISLGLGSTHLE------K 402
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
G KS R ++ + + LC+EL L DL++ T+TL
Sbjct: 403 DGERKSMSTERTFSEISKAEDQYS-LCQELCRELAQDLQKEGLKGKTVTL 451
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 22/111 (19%), Positives = 42/111 (37%)
Query: 411 CLSESNKKQVNIPKERLDNSTGDCLSESN-QNQVNIPKERLAEAATTSTSTDRCGSDQIQ 469
C E + + E ++ +CL+ S ++ V I K L+ T C ++ I
Sbjct: 618 CFEEQSSSNL----EEINRHVDECLAGSLVEDTVEISKNDLSRE-NTFNFLSHCKNENID 672
Query: 470 QRSESWKLRIEEIDPSVIDELPKEIQDEIQAWLR-PSKRPHRVKQGFTIAD 519
E+ ++ S + + + S++PHR KQ + D
Sbjct: 673 DCKENVTDQLAGTGQSASTSENSSGNSRDKKFTQIVSEKPHREKQPGDLID 723
>UNIPROTKB|Q81M86 [details] [associations]
symbol:dinB "DNA polymerase IV" species:1392 "Bacillus
anthracis" [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 RefSeq:NP_846596.1 RefSeq:YP_021011.1
RefSeq:YP_030301.1 ProteinModelPortal:Q81M86
EnsemblBacteria:EBBACT00000012953 EnsemblBacteria:EBBACT00000016454
EnsemblBacteria:EBBACT00000021276 GeneID:1087598 GeneID:2818956
GeneID:2848139 KEGG:ban:BA_4366 KEGG:bar:GBAA_4366 KEGG:bat:BAS4051
HOGENOM:HOG000082710 OMA:GDQIRRI ProtClustDB:PRK01810
BioCyc:BANT260799:GJAJ-4108-MONOMER
BioCyc:BANT261594:GJ7F-4248-MONOMER InterPro:IPR025188 Pfam:PF13438
Uniprot:Q81M86
Length = 412
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 42/149 (28%), Positives = 69/149 (46%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
+L E + CS GIA N LAK AS M KP T + + ++ LP+ M +G K
Sbjct: 138 LLTELQLPCSIGIAPNLFLAKTASDMKKPLGITVLRKRDIPEMIWPLPVGAMHGIGEKTA 197
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
L N++ + T+ L K +E ++ G + G L A+G+ EV + + G
Sbjct: 198 EKL-NDIHIQTIEQLAKGNEHIIRAKIGKH-GVDLQRRAKGMDDREVDPSQMGQHKSVGN 255
Query: 123 SFPGPRALKTVASVQHWLNQLCEELSERL 151
S + + + L +L + +S+RL
Sbjct: 256 SMTFSKDMDEEKELLDMLQRLSKSVSKRL 284
>TIGR_CMR|BA_4366 [details] [associations]
symbol:BA_4366 "DNA-damage-inducible protein P, putative"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0009650 "UV protection"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 RefSeq:NP_846596.1 RefSeq:YP_021011.1
RefSeq:YP_030301.1 ProteinModelPortal:Q81M86
EnsemblBacteria:EBBACT00000012953 EnsemblBacteria:EBBACT00000016454
EnsemblBacteria:EBBACT00000021276 GeneID:1087598 GeneID:2818956
GeneID:2848139 KEGG:ban:BA_4366 KEGG:bar:GBAA_4366 KEGG:bat:BAS4051
HOGENOM:HOG000082710 OMA:GDQIRRI ProtClustDB:PRK01810
BioCyc:BANT260799:GJAJ-4108-MONOMER
BioCyc:BANT261594:GJ7F-4248-MONOMER InterPro:IPR025188 Pfam:PF13438
Uniprot:Q81M86
Length = 412
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 42/149 (28%), Positives = 69/149 (46%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
+L E + CS GIA N LAK AS M KP T + + ++ LP+ M +G K
Sbjct: 138 LLTELQLPCSIGIAPNLFLAKTASDMKKPLGITVLRKRDIPEMIWPLPVGAMHGIGEKTA 197
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
L N++ + T+ L K +E ++ G + G L A+G+ EV + + G
Sbjct: 198 EKL-NDIHIQTIEQLAKGNEHIIRAKIGKH-GVDLQRRAKGMDDREVDPSQMGQHKSVGN 255
Query: 123 SFPGPRALKTVASVQHWLNQLCEELSERL 151
S + + + L +L + +S+RL
Sbjct: 256 SMTFSKDMDEEKELLDMLQRLSKSVSKRL 284
>UNIPROTKB|F1S2I2 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0003684
GO:GO:0003887 GO:GO:0006297 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
KO:K03511 CTD:51426 OMA:TCTELYQ EMBL:CU466449 RefSeq:XP_003123756.1
Ensembl:ENSSSCT00000015383 GeneID:100518650 KEGG:ssc:100518650
Uniprot:F1S2I2
Length = 878
Score = 150 (57.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 51/170 (30%), Positives = 81/170 (47%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKP-AQQTTVPFSSV-KGLLDSLPIKKMKQLGG 59
++ ++T T SAGIA N MLAK+ S NKP Q +P V + LPI+K+ +G
Sbjct: 307 RIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQVVMDFIKDLPIRKVSGIG- 365
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLW--NIARGISGEEVQARLLPKS 117
K+ + LG+ T DL + + S F+ +W + +I+ G+ + LP+
Sbjct: 366 KVTEKMLKALGIITCTDLY---QQRALLSLLFSETSWHYFLHISLGLG-----STCLPRD 417
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
G KS R + + + LC+EL L DL++ T+TL
Sbjct: 418 -GERKSMSVERTFSEINKAEEQYS-LCQELCSELAQDLQKEGLKGRTVTL 465
Score = 41 (19.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 276 PLSPSGSESYSTLNSTELQNELPGEQVWIEH 306
P + G ++ S +S E + LP + + +EH
Sbjct: 718 PSNAEGVDASSNKHSEEECSNLPSKSLHMEH 748
>UNIPROTKB|A6QNV6 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0003684
GO:GO:0003887 GO:GO:0006297 eggNOG:COG0389 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879
GeneTree:ENSGT00530000062942 HOGENOM:HOG000082711 KO:K03511
CTD:51426 HOVERGEN:HBG101212 OMA:TCTELYQ OrthoDB:EOG4Z8XVV
EMBL:DAAA02027742 EMBL:DAAA02027743 EMBL:BC149024 IPI:IPI00867010
RefSeq:NP_001095728.1 UniGene:Bt.38144 SMR:A6QNV6 STRING:A6QNV6
Ensembl:ENSBTAT00000005265 GeneID:541218 KEGG:bta:541218
InParanoid:A6QNV6 NextBio:20879073 Uniprot:A6QNV6
Length = 877
Score = 144 (55.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 49/170 (28%), Positives = 81/170 (47%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKP-AQQTTVPF-SSVKGLLDSLPIKKMKQLGG 59
++ ++T T SAGIA N MLAK+ S NKP Q +P +V + LPI+K+ +G
Sbjct: 307 RIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIG- 365
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTW--LWNIARGISGEEVQARLLPKS 117
K+ + LG+ T +L + + S F+ +W +I+ G+ + AR
Sbjct: 366 KVTEKMLKALGIITCTELY---QQRALLSLLFSETSWHHFLHISLGLGSTHL-AR----- 416
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
G KS R ++ + + LC+EL L DL++ T+T+
Sbjct: 417 DGERKSMSVERTFSEISKAEEQYS-LCQELCSELAQDLQKKGLKGRTVTI 465
>MGI|MGI:1349767 [details] [associations]
symbol:Polk "polymerase (DNA directed), kappa" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=TAS] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
SMART:SM00734 MGI:MGI:1349767 GO:GO:0005634 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 GO:GO:0003887
GO:GO:0006297 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
CleanEx:MM_POLK PDB:4FJO PDBsum:4FJO GeneTree:ENSGT00530000062942
HOGENOM:HOG000082711 KO:K03511 CTD:51426 HOVERGEN:HBG101212
OMA:TCTELYQ OrthoDB:EOG4Z8XVV EMBL:AB027563 EMBL:AF163571
EMBL:AB040765 EMBL:BC052820 IPI:IPI00131620 IPI:IPI00462547
RefSeq:NP_036178.1 UniGene:Mm.89926 PDB:2LSJ PDBsum:2LSJ
ProteinModelPortal:Q9QUG2 SMR:Q9QUG2 IntAct:Q9QUG2 STRING:Q9QUG2
PhosphoSite:Q9QUG2 PRIDE:Q9QUG2 Ensembl:ENSMUST00000022172
GeneID:27015 KEGG:mmu:27015 UCSC:uc007rne.1 InParanoid:Q9QUG2
NextBio:304949 Bgee:Q9QUG2 Genevestigator:Q9QUG2
GermOnline:ENSMUSG00000021668 Uniprot:Q9QUG2
Length = 852
Score = 152 (58.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 51/170 (30%), Positives = 84/170 (49%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKP-AQQTTVPF-SSVKGLLDSLPIKKMKQLGG 59
++ ++T T SAGIA N MLAK+ S NKP Q +P S+V + LPI+K+ +G
Sbjct: 299 RIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPSRSAVMDFIKDLPIRKVSGIG- 357
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLW--NIARGISGEEVQARLLPKS 117
K+ + LG+ T +L + + S F+ +W + +IA G+ ++ AR
Sbjct: 358 KVTEKMLMALGIVTCTELY---QQRALLSLLFSETSWHYFLHIALGLGSTDL-AR----- 408
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
G KS R ++ + + LC+EL L DL++ T+T+
Sbjct: 409 DGERKSMSVERTFSEISKTEEQYS-LCQELCAELAHDLQKEGLKGRTVTI 457
Score = 37 (18.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 429 NSTGDCLSESNQNQVNIPKE 448
+STGD L ++++ ++ P E
Sbjct: 540 SSTGDSLDKTDKTELAKPLE 559
>UNIPROTKB|Q5Q9G8 [details] [associations]
symbol:POLK "Polymerase kappa isoform 1" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR006642
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 EMBL:AC010245
EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 UniGene:Hs.732105 HGNC:HGNC:9183
HOVERGEN:HBG101212 EMBL:AC026424 EMBL:AY769929 IPI:IPI01013677
SMR:Q5Q9G8 STRING:Q5Q9G8 Ensembl:ENST00000380481 Uniprot:Q5Q9G8
Length = 780
Score = 142 (55.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 47/170 (27%), Positives = 80/170 (47%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKP-AQQTTVPF-SSVKGLLDSLPIKKMKQLGG 59
++ ++T T SAGIA N MLAK+ S NKP Q +P +V + LPI+K+ +G
Sbjct: 210 RIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIG- 268
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLW--NIARGISGEEVQARLLPKS 117
K+ + LG+ T +L + + S F+ +W + +I+ G+ +
Sbjct: 269 KVTEKMLKALGIITCTELY---QQRALLSLLFSETSWHYFLHISLGLGSTHLTR------ 319
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
G KS R + + + LC+EL L DL++ + T+T+
Sbjct: 320 DGERKSMSVERTFSEINKAEEQYS-LCQELCSELAQDLQKERLKGRTVTI 368
>UNIPROTKB|Q9UBT6 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IMP]
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 EMBL:CH471084 EMBL:AB036934
GO:GO:0003887 GO:GO:0006297 eggNOG:COG0389 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 KO:K03511
EMBL:AB027564 EMBL:AF163570 EMBL:AF194973 EMBL:AF315602
EMBL:AF318313 EMBL:AK091659 EMBL:AK314610 EMBL:AY273797
EMBL:BC014955 EMBL:BC050718 EMBL:AB036935 IPI:IPI00033151
IPI:IPI00218100 IPI:IPI00552440 IPI:IPI00552703 RefSeq:NP_057302.1
UniGene:Hs.732105 PDB:1T94 PDB:2OH2 PDB:2W7O PDB:2W7P PDB:3IN5
PDB:3PZP PDBsum:1T94 PDBsum:2OH2 PDBsum:2W7O PDBsum:2W7P
PDBsum:3IN5 PDBsum:3PZP ProteinModelPortal:Q9UBT6 SMR:Q9UBT6
IntAct:Q9UBT6 STRING:Q9UBT6 PhosphoSite:Q9UBT6 DMDM:59798438
PaxDb:Q9UBT6 PRIDE:Q9UBT6 Ensembl:ENST00000241436
Ensembl:ENST00000352007 Ensembl:ENST00000508526
Ensembl:ENST00000510815 Ensembl:ENST00000515295 GeneID:51426
KEGG:hsa:51426 UCSC:uc003kdw.3 UCSC:uc003keb.3 UCSC:uc010izq.3
CTD:51426 GeneCards:GC05P074843 HGNC:HGNC:9183 MIM:605650
neXtProt:NX_Q9UBT6 PharmGKB:PA33503 HOVERGEN:HBG101212
InParanoid:Q9UBT6 OMA:TCTELYQ OrthoDB:EOG4Z8XVV BindingDB:Q9UBT6
ChEMBL:CHEMBL5365 EvolutionaryTrace:Q9UBT6 GenomeRNAi:51426
NextBio:54977 ArrayExpress:Q9UBT6 Bgee:Q9UBT6 Genevestigator:Q9UBT6
Uniprot:Q9UBT6
Length = 870
Score = 142 (55.0 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 47/170 (27%), Positives = 80/170 (47%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKP-AQQTTVPF-SSVKGLLDSLPIKKMKQLGG 59
++ ++T T SAGIA N MLAK+ S NKP Q +P +V + LPI+K+ +G
Sbjct: 300 RIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIG- 358
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLW--NIARGISGEEVQARLLPKS 117
K+ + LG+ T +L + + S F+ +W + +I+ G+ +
Sbjct: 359 KVTEKMLKALGIITCTELY---QQRALLSLLFSETSWHYFLHISLGLGSTHLTR------ 409
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
G KS R + + + LC+EL L DL++ + T+T+
Sbjct: 410 DGERKSMSVERTFSEINKAEEQYS-LCQELCSELAQDLQKERLKGRTVTI 458
>UNIPROTKB|E2RPL9 [details] [associations]
symbol:REV1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0003887 GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GO:GO:0017125 GeneTree:ENSGT00530000062942 KO:K03515 CTD:51455
OMA:YRFCRGL EMBL:AAEX03007444 RefSeq:XP_538458.3
Ensembl:ENSCAFT00000003562 GeneID:481337 KEGG:cfa:481337
Uniprot:E2RPL9
Length = 1253
Score = 140 (54.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 44/160 (27%), Positives = 75/160 (46%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKL 61
++ +T+ S GI N +LA++A+ KP Q + V + + + +G +
Sbjct: 597 EIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDDFIRGQLVSNLPGVGRSM 656
Query: 62 GTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSG 121
+ L N LG+ T GDL + KLQ+ +G TG L+ RG+ V+ KS +
Sbjct: 657 ESKL-NSLGIKTCGDLQYMTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRTEKERKSISAE 715
Query: 122 KSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRI 161
++ G R + + LN L EE+ RL + + KR+
Sbjct: 716 INY-GIRFTQPKEAEAFLLN-LSEEIQRRLEAAHVKGKRL 753
Score = 52 (23.4 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 481 EIDPSVIDELPKEIQDEIQA 500
++DP V LP E+Q E++A
Sbjct: 1016 QVDPEVFAALPAELQKELKA 1035
>UNIPROTKB|F1N787 [details] [associations]
symbol:REV1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 GO:GO:0009411 GO:GO:0000287 GO:GO:0003684
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887
GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879 GO:GO:0017125
GeneTree:ENSGT00530000062942 OMA:YRFCRGL EMBL:DAAA02030163
EMBL:DAAA02030164 EMBL:DAAA02030165 EMBL:DAAA02030166
EMBL:DAAA02030167 EMBL:DAAA02030168 IPI:IPI00731687
Ensembl:ENSBTAT00000061518 Uniprot:F1N787
Length = 1202
Score = 138 (53.6 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 43/161 (26%), Positives = 75/161 (46%)
Query: 1 MQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGK 60
M++ +T+ S GI N +LA++A+ KP Q + V + + + +G
Sbjct: 545 MEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDDFIRGQLVTNLPGVGRS 604
Query: 61 LGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGS 120
+ + L + LG+ T GDL + KLQ+ +G TG L+ RG+ V+ KS +
Sbjct: 605 MESKLMS-LGIRTCGDLQYMTMAKLQKEFGSKTGQMLYRFCRGLDDRPVRTEKERKSISA 663
Query: 121 GKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRI 161
++ G R + +L L EE+ RL + + KR+
Sbjct: 664 EINY-GIR-FSQPKEAEAFLLSLSEEIQRRLEAVGMKGKRL 702
Score = 51 (23.0 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 481 EIDPSVIDELPKEIQDEIQA 500
++DP V LP E+Q E++A
Sbjct: 965 QVDPEVFAALPVELQKELRA 984
>UNIPROTKB|D6RAE5 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:CH471084
EMBL:AC010245 EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879
HOGENOM:HOG000082711 UniGene:Hs.732105 HGNC:HGNC:9183 EMBL:AC026424
IPI:IPI00966124 SMR:D6RAE5 Ensembl:ENST00000503479 Uniprot:D6RAE5
Length = 396
Score = 134 (52.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 45/162 (27%), Positives = 76/162 (46%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKP-AQQTTVPF-SSVKGLLDSLPIKKMKQLGG 59
++ ++T T SAGIA N MLAK+ S NKP Q +P +V + LPI+K+ +G
Sbjct: 234 RIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIG- 292
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLW--NIARGISGEEVQARLLPKS 117
K+ + LG+ T +L + + S F+ +W + +I+ G+ +
Sbjct: 293 KVTEKMLKALGIITCTELY---QQRALLSLLFSETSWHYFLHISLGLGSTHLTR------ 343
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNK 159
G KS R + + + LC+EL L DL++ +
Sbjct: 344 DGERKSMSVERTFSEINKAEEQYS-LCQELCSELAQDLQKER 384
>TIGR_CMR|SPO_3280 [details] [associations]
symbol:SPO_3280 "DNA polymerase IV, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003684 GO:GO:0006281 GO:GO:0006261
GO:GO:0003887 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
SUPFAM:SSF100879 OMA:PALCRDC ProtClustDB:PRK02794
RefSeq:YP_168477.1 ProteinModelPortal:Q5LND1 GeneID:3193147
KEGG:sil:SPO3280 PATRIC:23380003 Uniprot:Q5LND1
Length = 420
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 6 ETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLGTSL 65
E T S G++HNK LAK+AS + KP + + + L P++ + +G SL
Sbjct: 168 ELGVTGSIGLSHNKFLAKVASDLEKPRGFSVIGRAETAEFLRDKPVRLIWGIGPAAQESL 227
Query: 66 QNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGKSFP 125
+ G+ T DLL++ ++ L +G G LW++ARG V A KS + +F
Sbjct: 228 ERA-GIRTFTDLLRWEQEALVARFGA-MGQRLWHLARGEDRRRVSAHDPIKSISNETTFF 285
Query: 126 GPRALKTVASVQHWLNQLCEELSER 150
V W ++ E++++R
Sbjct: 286 EDTGDADVLDGHIW--RMAEKVADR 308
>UNIPROTKB|Q9UBZ9 [details] [associations]
symbol:REV1 "DNA repair protein REV1" species:9606 "Homo
sapiens" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0017125 "deoxycytidyl transferase
activity" evidence=IEA] [GO:0042276 "error-prone translesion
synthesis" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009411 "response to UV" evidence=IDA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] Reactome:REACT_216 InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0005654
GO:GO:0000287 GO:GO:0003684 GO:GO:0006260 EMBL:AC018690
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887
GO:GO:0042276 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
PDB:3VU7 PDBsum:3VU7 GO:GO:0017125 PDB:2LSK PDBsum:2LSK KO:K03515
CTD:51455 HOGENOM:HOG000154094 HOVERGEN:HBG054140 OrthoDB:EOG4GF3DF
EMBL:AF151538 EMBL:AF206019 EMBL:AB047646 EMBL:AF357886
EMBL:AK002087 EMBL:AJ131720 IPI:IPI00008816 IPI:IPI00552928
IPI:IPI00552936 RefSeq:NP_001032961.1 RefSeq:NP_057400.1
UniGene:Hs.443077 PDB:2EBW PDB:2LSY PDB:3GQC PDBsum:2EBW
PDBsum:2LSY PDBsum:3GQC ProteinModelPortal:Q9UBZ9 SMR:Q9UBZ9
MINT:MINT-140323 STRING:Q9UBZ9 PhosphoSite:Q9UBZ9 DMDM:59798439
PaxDb:Q9UBZ9 PRIDE:Q9UBZ9 Ensembl:ENST00000258428
Ensembl:ENST00000393445 GeneID:51455 KEGG:hsa:51455 UCSC:uc002tac.3
UCSC:uc002tad.3 UCSC:uc002tae.1 GeneCards:GC02M100016
HGNC:HGNC:14060 HPA:HPA044534 HPA:HPA051036 MIM:606134
neXtProt:NX_Q9UBZ9 PharmGKB:PA162401120 InParanoid:Q9UBZ9
OMA:YRFCRGL PhylomeDB:Q9UBZ9 ChiTaRS:REV1 EvolutionaryTrace:Q9UBZ9
GenomeRNAi:51455 NextBio:55069 ArrayExpress:Q9UBZ9 Bgee:Q9UBZ9
CleanEx:HS_REV1 Genevestigator:Q9UBZ9 GermOnline:ENSG00000135945
Uniprot:Q9UBZ9
Length = 1251
Score = 137 (53.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 1 MQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGK 60
M++ +T+ S GI N +LA++A+ KP Q + V + + + +G
Sbjct: 596 MEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDDFIRGQLVTNLPGVGHS 655
Query: 61 LGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGS 120
+ + L + LG+ T GDL + KLQ+ +G TG L+ RG+ V+ KS +
Sbjct: 656 MESKLAS-LGIKTCGDLQYMTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRTEKERKSVSA 714
Query: 121 GKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRI 161
++ G R + + +L L EE+ RL + + KR+
Sbjct: 715 EINY-GIRFTQP-KEAEAFLLSLSEEIQRRLEATGMKGKRL 753
Score = 51 (23.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 481 EIDPSVIDELPKEIQDEIQA 500
++DP V LP E+Q E++A
Sbjct: 1015 QVDPEVFAALPAELQRELKA 1034
Score = 42 (19.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 345 QNKPQNRDDSRMRSVPIKSNQQEHKKSALKDK 376
Q + +N + S + N H K+A+K+K
Sbjct: 1040 QRQGENSTHQQSASASVPKNPLLHLKAAVKEK 1071
>UNIPROTKB|Q5Q9G5 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:AC010245
EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082711
UniGene:Hs.732105 HGNC:HGNC:9183 EMBL:AC026424 EMBL:AY769932
IPI:IPI00967663 SMR:Q5Q9G5 STRING:Q5Q9G5 Ensembl:ENST00000504026
UCSC:uc003kee.3 HOVERGEN:HBG056846 Uniprot:Q5Q9G5
Length = 461
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/162 (27%), Positives = 76/162 (46%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKP-AQQTTVPF-SSVKGLLDSLPIKKMKQLGG 59
++ ++T T SAGIA N MLAK+ S NKP Q +P +V + LPI+K+ +G
Sbjct: 300 RIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIG- 358
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLW--NIARGISGEEVQARLLPKS 117
K+ + LG+ T +L + + S F+ +W + +I+ G+ +
Sbjct: 359 KVTEKMLKALGIITCTELY---QQRALLSLLFSETSWHYFLHISLGLGSTHLTR------ 409
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNK 159
G KS R + + + LC+EL L DL++ +
Sbjct: 410 DGERKSMSVERTFSEINKAEEQYS-LCQELCSELAQDLQKER 450
>UNIPROTKB|F1P5H4 [details] [associations]
symbol:REV1 "DNA repair protein REV1" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0009411
"response to UV" evidence=IEA] [GO:0017125 "deoxycytidyl
transferase activity" evidence=IEA] [GO:0042276 "error-prone
translesion synthesis" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0003887 GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GO:GO:0017125 GeneTree:ENSGT00530000062942 OMA:YRFCRGL
EMBL:AADN02017696 EMBL:AADN02017697 IPI:IPI01017381
Ensembl:ENSGALT00000027069 Uniprot:F1P5H4
Length = 1255
Score = 135 (52.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKL 61
++ +T+ T S G+ N +LA++A+ KP Q + V + + + +G +
Sbjct: 608 EIKAQTKCTASVGMGSNILLARMATRKAKPDGQYHLKPEEVDDFIRGQLVTNLPGVGRSM 667
Query: 62 GTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSG 121
+ L + LG+ T GDL S KLQ+ +G TG L+ RG+ V+ KS +
Sbjct: 668 ESKLAS-LGIRTCGDLQCASMSKLQKEFGPKTGQMLYRFCRGLDDRPVRTEKERKSVSAE 726
Query: 122 KSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRI 161
++ G R + + +L L EE+ RL + + KR+
Sbjct: 727 INY-GIRFTQP-KEAEAFLLSLSEEIQRRLEAAGMKGKRL 764
Score = 53 (23.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 481 EIDPSVIDELPKEIQDEIQ-AWLRPSKRPHR 510
++DP V LP E+Q E++ A+ + K+P +
Sbjct: 1025 QVDPEVFAALPAELQAELKDAYDQRQKQPEQ 1055
>UNIPROTKB|Q4KWZ7 [details] [associations]
symbol:REV1 "DNA repair protein REV1" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0019985
"translesion synthesis" evidence=TAS] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0002206 "gene conversion of
immunoglobulin genes" evidence=IMP] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005654 GO:GO:0000287
GO:GO:0003684 GO:GO:0006260 GO:GO:0006302 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 Reactome:REACT_115612 GO:GO:0003887
GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
KO:K03515 EMBL:AY675169 IPI:IPI00571721 RefSeq:NP_001025982.2
UniGene:Gga.24037 ProteinModelPortal:Q4KWZ7 SMR:Q4KWZ7
STRING:Q4KWZ7 GeneID:418703 KEGG:gga:418703 CTD:51455
HOGENOM:HOG000154094 HOVERGEN:HBG054140 InParanoid:Q4KWZ7
OrthoDB:EOG4GF3DF NextBio:20821851 GO:GO:0002206 Uniprot:Q4KWZ7
Length = 1255
Score = 135 (52.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKL 61
++ +T+ T S G+ N +LA++A+ KP Q + V + + + +G +
Sbjct: 608 EIKAQTKCTASVGMGSNILLARMATRKAKPDGQYHLKPEEVDDFIRGQLVTNLPGVGRSM 667
Query: 62 GTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSG 121
+ L + LG+ T GDL S KLQ+ +G TG L+ RG+ V+ KS +
Sbjct: 668 ESKLAS-LGIRTCGDLQCASMSKLQKEFGPKTGQMLYRFCRGLDDRPVRTEKERKSVSAE 726
Query: 122 KSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRI 161
++ G R + + +L L EE+ RL + + KR+
Sbjct: 727 INY-GIRFTQP-KEAEAFLLSLSEEIQRRLEAAGMKGKRL 764
Score = 53 (23.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 481 EIDPSVIDELPKEIQDEIQ-AWLRPSKRPHR 510
++DP V LP E+Q E++ A+ + K+P +
Sbjct: 1025 QVDPEVFAALPAELQAELKDAYDQRQKQPEQ 1055
>UNIPROTKB|Q5Q9G7 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:AC010245
EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082711
UniGene:Hs.732105 HGNC:HGNC:9183 EMBL:AC026424 HOVERGEN:HBG056846
EMBL:AY769930 IPI:IPI00965083 SMR:Q5Q9G7 STRING:Q5Q9G7
Ensembl:ENST00000509126 Uniprot:Q5Q9G7
Length = 489
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/162 (27%), Positives = 76/162 (46%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKP-AQQTTVPF-SSVKGLLDSLPIKKMKQLGG 59
++ ++T T SAGIA N MLAK+ S NKP Q +P +V + LPI+K+ +G
Sbjct: 300 RIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIG- 358
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLW--NIARGISGEEVQARLLPKS 117
K+ + LG+ T +L + + S F+ +W + +I+ G+ +
Sbjct: 359 KVTEKMLKALGIITCTELY---QQRALLSLLFSETSWHYFLHISLGLGSTHLTR------ 409
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNK 159
G KS R + + + LC+EL L DL++ +
Sbjct: 410 DGERKSMSVERTFSEINKAEEQYS-LCQELCSELAQDLQKER 450
>UNIPROTKB|E9PST4 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 RGD:620058 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0006281
GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879 IPI:IPI00777177
Ensembl:ENSRNOT00000061462 ArrayExpress:E9PST4 Uniprot:E9PST4
Length = 771
Score = 132 (51.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 47/158 (29%), Positives = 75/158 (47%)
Query: 14 GIAHNKMLAKLASGMNKP-AQQTTVPF-SSVKGLLDSLPIKKMKQLGGKLGTSLQNELGV 71
GIA N MLAK+ S NKP Q VP S+V + LPI+K+ +G K+ + LG+
Sbjct: 231 GIAPNTMLAKVCSDKNKPNGQYQIVPSRSAVMDFIKDLPIRKVSGIG-KVTEKMLLALGI 289
Query: 72 TTVGDLLKFSEDKLQESYGFNTGTWLW--NIARGISGEEVQARLLPKSHGSGKSFPGPRA 129
T +L + + S F+ +W + ++A G+ ++ AR G KS R
Sbjct: 290 VTCTELY---QQRALLSLLFSESSWHYFLHVALGLGSTDL-AR-----DGERKSMSVERT 340
Query: 130 LKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
+ + + LC+EL L DL++ T+T+
Sbjct: 341 FSEINKTEEQYS-LCQELCTELAHDLQKEGLKGRTVTI 377
Score = 46 (21.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 262 STSEQLPDNFIDAAPLSPSGSESYSTLN 289
S E PD+ + PLSP+ +E+ STL+
Sbjct: 637 SEGEGYPDSQGKSCPLSPA-NETVSTLS 663
>UNIPROTKB|J3KTN3 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI Ensembl:ENST00000583136 Uniprot:J3KTN3
Length = 222
Score = 122 (48.0 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 33/73 (45%), Positives = 45/73 (61%)
Query: 10 TCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLP-IKKMKQLGGKLGTSLQNE 68
T AG+A NK+LAKL SG+ KP QQT + S + L+ SL IK++ +G K L+
Sbjct: 151 TGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLE-A 209
Query: 69 LGVTTVGDLLKFS 81
LG+ +V DL FS
Sbjct: 210 LGINSVRDLQTFS 222
>ZFIN|ZDB-GENE-060526-137 [details] [associations]
symbol:polk "polymerase (DNA directed) kappa"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
SMART:SM00734 ZFIN:ZDB-GENE-060526-137 GO:GO:0003684 GO:GO:0006281
GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GeneTree:ENSGT00530000062942 HOVERGEN:HBG101212 OrthoDB:EOG4Z8XVV
EMBL:BX294131 IPI:IPI00806343 UniGene:Dr.86433 SMR:B0S5R3
Ensembl:ENSDART00000141039 OMA:FISTEDK Uniprot:B0S5R3
Length = 875
Score = 132 (51.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 49/170 (28%), Positives = 80/170 (47%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSS--VKGLLDSLPIKKMKQLGG 59
++ ++T T SAGIA N MLAK+ S NKP Q +P V + LP++K+ +G
Sbjct: 251 RIEQKTSLTASAGIAPNMMLAKVCSDKNKPNGQYRIPPERQVVMDFMKDLPVRKVSGVG- 309
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTW--LWNIARGISGEEVQARLLPKS 117
K+ + LG+ T L + S F+ +W +I+ G+ ++ KS
Sbjct: 310 KVTEKMLAALGIVTCSQL---GQQMALLSLLFSETSWHHFLHISLGLGSTYMERDSERKS 366
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
+ ++F G + A Q+ LC+EL L DL++ T+TL
Sbjct: 367 MSTERTF-GEMS---DAGEQY---SLCKELCHDLAQDLQREGLKGKTVTL 409
>MGI|MGI:1929074 [details] [associations]
symbol:Rev1 "REV1 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0009411 "response to UV" evidence=ISO]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0017125
"deoxycytidyl transferase activity" evidence=IDA] [GO:0042276
"error-prone translesion synthesis" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 MGI:MGI:1929074 Pfam:PF00533 GO:GO:0005634
GO:GO:0009411 GO:GO:0000287 GO:GO:0003684 GO:GO:0006260
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887
GO:GO:0042276 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
PDB:4FJO PDBsum:4FJO GO:GO:0017125 GeneTree:ENSGT00530000062942
PDB:2LSJ PDBsum:2LSJ KO:K03515 CTD:51455 HOGENOM:HOG000154094
HOVERGEN:HBG054140 OrthoDB:EOG4GF3DF OMA:YRFCRGL ChiTaRS:REV1
EMBL:AB057418 EMBL:AF179302 EMBL:BC058093 IPI:IPI00396706
RefSeq:NP_062516.2 UniGene:Mm.389103 PDB:2LSG PDBsum:2LSG
ProteinModelPortal:Q920Q2 SMR:Q920Q2 DIP:DIP-41772N IntAct:Q920Q2
STRING:Q920Q2 PhosphoSite:Q920Q2 PRIDE:Q920Q2
Ensembl:ENSMUST00000027251 GeneID:56210 KEGG:mmu:56210
UCSC:uc007asp.1 InParanoid:Q920Q2 NextBio:312050 Bgee:Q920Q2
CleanEx:MM_REV1 Genevestigator:Q920Q2 GermOnline:ENSMUSG00000026082
Uniprot:Q920Q2
Length = 1249
Score = 130 (50.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 42/161 (26%), Positives = 76/161 (47%)
Query: 1 MQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGK 60
+++ +T+ S GI N +LA++A+ KP Q + V + + + +G
Sbjct: 594 IEIKDKTKCAASVGIGSNILLARMATKKAKPDGQYHLQPDEVDDFIRGQLVTNLPGVGRS 653
Query: 61 LGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGS 120
+ + L + LG+ T GDL + KLQ+ +G TG L+ RG+ V+ KS +
Sbjct: 654 MESKLAS-LGIKTCGDLQCLTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRTEKERKSVSA 712
Query: 121 GKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRI 161
++ G R + + +L L EE+ RL + + KR+
Sbjct: 713 EINY-GIRFTQP-KEAEAFLLSLSEEIQRRLEAAGMKGKRL 751
Score = 52 (23.4 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 481 EIDPSVIDELPKEIQDEIQA 500
++DP V LP E+Q E++A
Sbjct: 1015 QVDPDVFAALPAELQKELKA 1034
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 7/19 (36%), Positives = 16/19 (84%)
Query: 481 EIDPSVIDELPKEIQDEIQ 499
+ID SV++ LP +++++I+
Sbjct: 937 QIDQSVLEALPLDLREQIE 955
>RGD|1306715 [details] [associations]
symbol:Rev1 "REV1, polymerase (DNA directed)" species:10116
"Rattus norvegicus" [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA;ISO] [GO:0017125
"deoxycytidyl transferase activity" evidence=IEA;ISO] [GO:0042276
"error-prone translesion synthesis" evidence=IEA;ISO]
InterPro:IPR001126 InterPro:IPR012112 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573
PROSITE:PS50173 InterPro:IPR001357 Pfam:PF00533 RGD:1306715
GO:GO:0000287 GO:GO:0003684 GO:GO:0006281 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 EMBL:CH473965 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
KO:K03515 CTD:51455 OrthoDB:EOG4GF3DF IPI:IPI00951348
RefSeq:NP_001101683.1 UniGene:Rn.94641 Ensembl:ENSRNOT00000067197
GeneID:316344 KEGG:rno:316344 UCSC:RGD:1306715 NextBio:670745
Uniprot:D3ZRU9
Length = 1119
Score = 129 (50.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 42/161 (26%), Positives = 75/161 (46%)
Query: 1 MQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGK 60
M++ +T+ S GI N +LA++A+ KP Q + V + + + +G
Sbjct: 594 MEIKNKTQCAASVGIGSNILLARMATKKAKPDGQYHLQPDEVDDFIRGQLVTSLPGVGRS 653
Query: 61 LGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGS 120
+ + L + LG+ T GDL + KLQ+ +G TG L+ RG+ V+ KS +
Sbjct: 654 MESKLAS-LGIKTCGDLQCLTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRTEKERKSVSA 712
Query: 121 GKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRI 161
++ G R + + +L L E+ RL + + KR+
Sbjct: 713 EINY-GIRFTQP-REAEAFLLSLSGEIQSRLEAAGMKGKRL 751
Score = 52 (23.4 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 481 EIDPSVIDELPKEIQDEIQA 500
++DP V LP E+Q E++A
Sbjct: 1014 QVDPDVFAALPAELQKELKA 1033
Score = 52 (23.4 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 481 EIDPSVIDELPKEIQDEI-QAWLRPSKRPHRVKQ 513
+ID SV++ LP +I++++ QA+ P K+
Sbjct: 935 QIDQSVLEALPPDIREQVEQAYAAQQGEPRGSKK 968
>FB|FBgn0035150 [details] [associations]
symbol:Rev1 "Rev1" species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0017125 "deoxycytidyl
transferase activity" evidence=ISS;NAS] [GO:0019985 "translesion
synthesis" evidence=NAS] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=IMP] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 EMBL:AE014296 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0010569 GO:GO:0003887 GO:GO:0019985 Gene3D:3.30.1490.100
SUPFAM:SSF100879 GO:GO:0017125 GeneTree:ENSGT00530000062942
KO:K03515 OMA:TIPYDFD CTD:51455 FlyBase:FBgn0035150 EMBL:AB049435
RefSeq:NP_612047.1 UniGene:Dm.2203 SMR:Q9W0P2 IntAct:Q9W0P2
STRING:Q9W0P2 EnsemblMetazoa:FBtr0072557 GeneID:38079
KEGG:dme:Dmel_CG12189 UCSC:CG12189-RA InParanoid:Q9W0P2
GenomeRNAi:38079 NextBio:806885 Uniprot:Q9W0P2
Length = 995
Score = 133 (51.9 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 41/151 (27%), Positives = 77/151 (50%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSS-VKGLLDSLPIKKMKQLGGK 60
+V +T CSAG+A NK+LA++A+ KP Q + S+ + + + + + +G
Sbjct: 448 EVYSKTGCPCSAGVAGNKLLARMATKEAKPNGQFLLDSSNDILAYMAPMSLDLLPGVGSS 507
Query: 61 LGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGS 120
+ L+ + G+ GD+ + +K+++ G G L+ RGI + + K+ +
Sbjct: 508 ISHKLK-QAGLNNCGDVQNTTLEKMEKVLGKKLGQNLFQNCRGIDDRPLAYEQIRKTVSA 566
Query: 121 GKSFPGPRALKTVASVQHWLNQLCEELSERL 151
+F G R +V Q +L QL EE+++RL
Sbjct: 567 EMNF-GIRFTNSVECEQ-FLCQLSEEVTKRL 595
Score = 46 (21.3 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 452 EAATTSTSTDRCGSDQIQQRSESWK----LRIEEIDPSVIDELPKEIQDEI 498
+A ST R ++Q+R E + +R ++I ID+LP + I
Sbjct: 832 KATDLKPSTSRAAVARLQKRKERKEQEHYIRSDQIVADYIDDLPDFVNPHI 882
Score = 46 (21.3 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 26/101 (25%), Positives = 48/101 (47%)
Query: 412 LSESNKKQVNIPKERL-DNSTGDCLSESNQNQV--NIPKER----LAEAATTSTSTDRCG 464
+SE K + IP+ + D S GD + N+ V N PK R + T + + +
Sbjct: 695 MSEMRKDKP-IPQGAVGDKSIGD--DKVNKPLVFENKPKPREPRNVLSMLTAAAVSRKSV 751
Query: 465 SDQIQQRSESWKLR-----IEEIDPSVIDELPKEIQDEIQA 500
++ QR S + + ++D V+ +LP++I+ E+ A
Sbjct: 752 TEDRSQRGTSKPITRPLSLVPKLDEDVLAQLPEDIRLEVIA 792
>TIGR_CMR|CPS_1040 [details] [associations]
symbol:CPS_1040 "DNA polymerase IV" species:167879
"Colwellia psychrerythraea 34H" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR003583
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00278
GO:GO:0005737 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003887
eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 RefSeq:YP_267789.1
HSSP:Q9UNA4 ProteinModelPortal:Q487H6 STRING:Q487H6 GeneID:3521759
KEGG:cps:CPS_1040 PATRIC:21465357 OMA:QSLGMRT
BioCyc:CPSY167879:GI48-1126-MONOMER Uniprot:Q487H6
Length = 352
Score = 125 (49.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 36/115 (31%), Positives = 54/115 (46%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
+ E T SAGIA NK LAK+AS NKP Q + V ++ L +KK+ +G K
Sbjct: 132 IFNELNLTASAGIAPNKFLAKIASDENKPNGQCVITPDKVANFVEQLSLKKIPGIGPKTF 191
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKS 117
L N G T D+ + + LQ G + L+ + G+ +++ KS
Sbjct: 192 EKL-NRHGYVTCADVRQSNIRALQNIVGKFANS-LYLKSHGVDNRDLEVSRQRKS 244
>UNIPROTKB|Q0BZW2 [details] [associations]
symbol:dinB "DNA polymerase IV" species:228405 "Hyphomonas
neptunium ATCC 15444" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005737 GO:GO:0000287 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 GO:GO:0006261 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 RefSeq:YP_760981.1 ProteinModelPortal:Q0BZW2
STRING:Q0BZW2 GeneID:4289730 KEGG:hne:HNE_2286 PATRIC:32217415
OMA:PALCRDC ProtClustDB:PRK02794
BioCyc:HNEP228405:GI69-2308-MONOMER Uniprot:Q0BZW2
Length = 424
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 39/122 (31%), Positives = 54/122 (44%)
Query: 3 VLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSLPIKKMKQLGGKLG 62
V +E T S G++ NK LAK AS ++KP + + L P+ + +G K
Sbjct: 163 VEREVGVTVSVGLSSNKFLAKTASELDKPRGFAIIAPEEAEAFLAPHPVGFLHGVGPKFA 222
Query: 63 TSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHGSGK 122
SL N+ G T+ D+ K L YG TG WL A G +V KS S
Sbjct: 223 ESL-NKDGFYTIEDIQKADLKSLIRRYG-ETGDWLKRCAHGRDNRKVNPHEDRKSVSSET 280
Query: 123 SF 124
+F
Sbjct: 281 TF 282
>ASPGD|ASPL0000039840 [details] [associations]
symbol:AN3373 species:162425 "Emericella nidulans"
[GO:0000077 "DNA damage checkpoint" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 EMBL:BN001306 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 OMA:VHVDCDA EnsemblFungi:CADANIAT00009669
HOGENOM:HOG000082709 Uniprot:C8VHQ1
Length = 612
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 42/168 (25%), Positives = 78/168 (46%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPF--SSVKGLLDSLPIKKMKQLGG 59
++L++T+ + SAGIA N +AK+ S NKP Q VP +++ + LP++K+ +G
Sbjct: 236 EILEKTKISVSAGIAANAKIAKICSNRNKPNGQFRVPNEKNAIMEFMRDLPMRKINGVGR 295
Query: 60 KLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKSHG 119
L + +G+ T GD+ L + +G +L G+ ++Q P
Sbjct: 296 VFERELDS-IGIKTCGDIFP-QRAYLAKLFGEKALHFLAQCYLGVGRTKIQ----PAESY 349
Query: 120 SGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
KS R ++ + + +L ++ L DL + + + TL L
Sbjct: 350 ERKSVGTERTFHEISKREEFREKLWS-CAQELEKDLSRTQFMGRTLVL 396
>POMBASE|SPCC553.07c [details] [associations]
symbol:kpa1 "DinB translesion DNA repair polymerase, pol
kappa" species:4896 "Schizosaccharomyces pombe" [GO:0000077 "DNA
damage checkpoint" evidence=IMP] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISM]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0019985 "translesion synthesis" evidence=TAS] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 PomBase:SPCC553.07c
GO:GO:0005829 GO:GO:0007126 GO:GO:0000077 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0000790 GO:GO:0003887 GO:GO:0019985 eggNOG:COG0389
Gene3D:3.30.1490.100 SUPFAM:SSF100879 HSSP:Q9UHC5 KO:K03511
PIR:T41397 RefSeq:NP_587767.2 ProteinModelPortal:O74944
STRING:O74944 EnsemblFungi:SPCC553.07c.1 GeneID:2539547
KEGG:spo:SPCC553.07c OMA:VHVDCDA OrthoDB:EOG441TMM NextBio:20800707
Uniprot:O74944
Length = 547
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSV--KGLLDSLPIKKMKQLGG 59
QV +ET T S GIA NK+LAK+AS KP Q +PF + ++ LP++++ +G
Sbjct: 258 QVHEETGVTVSCGIAANKLLAKIASNKRKPNNQFFIPFDEIGISKFMNDLPVREVSGIGR 317
Query: 60 KLGTSLQNELGVTTVGDL 77
L L L + T GD+
Sbjct: 318 VLEQQLLG-LEIKTCGDI 334
>UNIPROTKB|E9PST3 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734 RGD:620058
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 IPI:IPI00777918 Ensembl:ENSRNOT00000061463
ArrayExpress:E9PST3 Uniprot:E9PST3
Length = 793
Score = 126 (49.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 46/157 (29%), Positives = 74/157 (47%)
Query: 15 IAHNKMLAKLASGMNKP-AQQTTVPF-SSVKGLLDSLPIKKMKQLGGKLGTSLQNELGVT 72
IA N MLAK+ S NKP Q VP S+V + LPI+K+ +G K+ + LG+
Sbjct: 254 IAPNTMLAKVCSDKNKPNGQYQIVPSRSAVMDFIKDLPIRKVSGIG-KVTEKMLLALGIV 312
Query: 73 TVGDLLKFSEDKLQESYGFNTGTWLW--NIARGISGEEVQARLLPKSHGSGKSFPGPRAL 130
T +L + + S F+ +W + ++A G+ ++ AR G KS R
Sbjct: 313 TCTELY---QQRALLSLLFSESSWHYFLHVALGLGSTDL-AR-----DGERKSMSVERTF 363
Query: 131 KTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTLTL 167
+ + + LC+EL L DL++ T+T+
Sbjct: 364 SEINKTEEQYS-LCQELCTELAHDLQKEGLKGRTVTI 399
Score = 46 (21.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 262 STSEQLPDNFIDAAPLSPSGSESYSTLN 289
S E PD+ + PLSP+ +E+ STL+
Sbjct: 659 SEGEGYPDSQGKSCPLSPA-NETVSTLS 685
>UNIPROTKB|Q81NC2 [details] [associations]
symbol:BAS3053 "ImpB/mucB/samB family protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082710
InterPro:IPR025188 Pfam:PF13438 KO:K03502 OMA:LWFHANG
RefSeq:NP_845581.1 RefSeq:YP_019924.1 RefSeq:YP_029310.1
ProteinModelPortal:Q81NC2 IntAct:Q81NC2 DNASU:1085004
EnsemblBacteria:EBBACT00000009721 EnsemblBacteria:EBBACT00000013537
EnsemblBacteria:EBBACT00000022229 GeneID:1085004 GeneID:2820058
GeneID:2849965 KEGG:ban:BA_3288 KEGG:bar:GBAA_3288 KEGG:bat:BAS3053
ProtClustDB:CLSK2516929 BioCyc:BANT260799:GJAJ-3115-MONOMER
BioCyc:BANT261594:GJ7F-3218-MONOMER Uniprot:Q81NC2
Length = 421
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 40/168 (23%), Positives = 79/168 (47%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSL----PIKKMKQL 57
++ + T C+ GIA N +++K+A + + V + + + + L P+ K +
Sbjct: 141 EIYEHTRIECTIGIAPNLLMSKVALDIEAKKNKDGVAYWTYEDIPTKLWSIRPLSKFWGI 200
Query: 58 GGKLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKS 117
K T L N+ G+ ++GDL + L++S+G G L + GI + + +P +
Sbjct: 201 SHKTETKL-NQKGIHSIGDLANYPLKYLKQSFGV-IGEELHLHSNGIDFSRISEKYVPVT 258
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTL 165
GKS + L +++ + L E +E +C L Q ++A T+
Sbjct: 259 TSIGKS----QILMRDYTIEEFPIILLEH-TEEVCYRLRQQNKLAQTV 301
>TIGR_CMR|BA_3288 [details] [associations]
symbol:BA_3288 "impB/mucB/samB family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0009650 "UV protection"
evidence=ISS] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082710
InterPro:IPR025188 Pfam:PF13438 KO:K03502 OMA:LWFHANG
RefSeq:NP_845581.1 RefSeq:YP_019924.1 RefSeq:YP_029310.1
ProteinModelPortal:Q81NC2 IntAct:Q81NC2 DNASU:1085004
EnsemblBacteria:EBBACT00000009721 EnsemblBacteria:EBBACT00000013537
EnsemblBacteria:EBBACT00000022229 GeneID:1085004 GeneID:2820058
GeneID:2849965 KEGG:ban:BA_3288 KEGG:bar:GBAA_3288 KEGG:bat:BAS3053
ProtClustDB:CLSK2516929 BioCyc:BANT260799:GJAJ-3115-MONOMER
BioCyc:BANT261594:GJ7F-3218-MONOMER Uniprot:Q81NC2
Length = 421
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 40/168 (23%), Positives = 79/168 (47%)
Query: 2 QVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTTVPFSSVKGLLDSL----PIKKMKQL 57
++ + T C+ GIA N +++K+A + + V + + + + L P+ K +
Sbjct: 141 EIYEHTRIECTIGIAPNLLMSKVALDIEAKKNKDGVAYWTYEDIPTKLWSIRPLSKFWGI 200
Query: 58 GGKLGTSLQNELGVTTVGDLLKFSEDKLQESYGFNTGTWLWNIARGISGEEVQARLLPKS 117
K T L N+ G+ ++GDL + L++S+G G L + GI + + +P +
Sbjct: 201 SHKTETKL-NQKGIHSIGDLANYPLKYLKQSFGV-IGEELHLHSNGIDFSRISEKYVPVT 258
Query: 118 HGSGKSFPGPRALKTVASVQHWLNQLCEELSERLCSDLEQNKRIAHTL 165
GKS + L +++ + L E +E +C L Q ++A T+
Sbjct: 259 TSIGKS----QILMRDYTIEEFPIILLEH-TEEVCYRLRQQNKLAQTV 301
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.129 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 527 494 0.00083 119 3 11 23 0.47 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 82
No. of states in DFA: 621 (66 KB)
Total size of DFA: 299 KB (2153 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.10u 0.21s 46.31t Elapsed: 00:00:02
Total cpu time: 46.11u 0.21s 46.32t Elapsed: 00:00:02
Start: Fri May 10 23:32:32 2013 End: Fri May 10 23:32:34 2013