BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009731
(527 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 301 bits (772), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 266/462 (57%), Gaps = 23/462 (4%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
+RY + LG+G FG C DR T++ A K I+K + D + REV ++K L
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLD- 79
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +I+ L E ED ++ ++V EL GGELFD I+ R ++E AA + + + + HK
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNY 230
H ++HRDLKPEN L +K+++ +K IDFGLS F+ + + +G+ YY+APEVL+ Y
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTY 199
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
+ D+WSAGVILYILL G PPF+ ++E + + + G F W +S+ AK L+R+
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK 259
Query: 291 MLEPDPKLRLTAKQVLEHPWLQN-AKKAPNV---PLGDVVRSRLKQFSMMNRFKRKALRV 346
ML P LR+TA Q LEHPW+Q + + P + P + + ++QF + + AL
Sbjct: 260 MLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLY 319
Query: 347 IAEFL-SVEEVEDIKEMFKKIDSDNDGVVSTDELKAG---------------LRNFGSQL 390
+A L +++E + + E+F+K+D++NDG++ DEL G ++N GS +
Sbjct: 320 MASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTI 379
Query: 391 AESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNE 450
E ++ L+ +D +G G+++Y EF+A + + + E + +AF FDKDG+G I E
Sbjct: 380 -EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKE 438
Query: 451 LRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMMK 492
L + + + I ++VD +KDG + ++EFV M++
Sbjct: 439 LFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E ++ FK D D G +ST EL S + E++ +IE VD N G +D+ EF+
Sbjct: 417 ERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFV 476
Query: 417 AVLLHLRR 424
+L + R
Sbjct: 477 EMLQNFVR 484
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 256/456 (56%), Gaps = 18/456 (3%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
DRY R LG+G FG LC D+ T + A K ISKR+++ D + + REV ++K L
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 107
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +I+ L E ED +LV E+ GGELFD I++R ++E AA + R ++ + HK
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 167
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNY 230
+ ++HRDLKPEN L +K +++ ++ IDFGLS F+ ++ + +G+ YY+APEVL Y
Sbjct: 168 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 227
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
+ D+WS GVILYILL G PPF +E + + + +G F+ W VSESAK L+R+
Sbjct: 228 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 287
Query: 291 MLEPDPKLRLTAKQVLEHPWLQNAKK---APNVPLGDVVRSRLKQFSMMNRFKRKALRVI 347
ML P +R++A+ L+H W+Q K + +VP D ++QF + + AL +
Sbjct: 288 MLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYM 347
Query: 348 -AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRN-----------FGSQLAESEV 395
++ S +E +++ +F K+D + DG + EL G + + E EV
Sbjct: 348 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV 407
Query: 396 QMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDAL 455
+++AVD + G ++Y EF+ V + + + + E L +AF FD D +G I EL A
Sbjct: 408 DQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTEL--AT 465
Query: 456 MEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+ +D ++ + EVD + DG + +DEF M+
Sbjct: 466 IFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 256/456 (56%), Gaps = 18/456 (3%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
DRY R LG+G FG LC D+ T + A K ISKR+++ D + + REV ++K L
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 108
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +I+ L E ED +LV E+ GGELFD I++R ++E AA + R ++ + HK
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 168
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNY 230
+ ++HRDLKPEN L +K +++ ++ IDFGLS F+ ++ + +G+ YY+APEVL Y
Sbjct: 169 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 228
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
+ D+WS GVILYILL G PPF +E + + + +G F+ W VSESAK L+R+
Sbjct: 229 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 288
Query: 291 MLEPDPKLRLTAKQVLEHPWLQNAKK---APNVPLGDVVRSRLKQFSMMNRFKRKALRVI 347
ML P +R++A+ L+H W+Q K + +VP D ++QF + + AL +
Sbjct: 289 MLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYM 348
Query: 348 -AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRN-----------FGSQLAESEV 395
++ S +E +++ +F K+D + DG + EL G + + E EV
Sbjct: 349 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV 408
Query: 396 QMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDAL 455
+++AVD + G ++Y EF+ V + + + + E L +AF FD D +G I EL A
Sbjct: 409 DQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTEL--AT 466
Query: 456 MEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+ +D ++ + EVD + DG + +DEF M+
Sbjct: 467 IFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 289 bits (740), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 256/456 (56%), Gaps = 18/456 (3%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
DRY R LG+G FG LC D+ T + A K ISKR+++ D + + REV ++K L
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 84
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +I+ L E ED +LV E+ GGELFD I++R ++E AA + R ++ + HK
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 144
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNY 230
+ ++HRDLKPEN L +K +++ ++ IDFGLS F+ ++ + +G+ YY+APEVL Y
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 204
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
+ D+WS GVILYILL G PPF +E + + + +G F+ W VSESAK L+R+
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 264
Query: 291 MLEPDPKLRLTAKQVLEHPWLQNAKK---APNVPLGDVVRSRLKQFSMMNRFKRKALRVI 347
ML P +R++A+ L+H W+Q K + +VP D ++QF + + AL +
Sbjct: 265 MLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYM 324
Query: 348 -AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRN-----------FGSQLAESEV 395
++ S +E +++ +F K+D + DG + EL G + + E EV
Sbjct: 325 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV 384
Query: 396 QMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDAL 455
+++AVD + G ++Y EF+ V + + + + E L +AF FD D +G I EL A
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTEL--AT 442
Query: 456 MEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+ +D ++ + EVD + DG + +DEF M+
Sbjct: 443 IFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 257/464 (55%), Gaps = 19/464 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ DRY ++LG G +G LC D+ T A K I K + T + + EVA++K L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
+ +I+ L E ED +LVME+ GGELFD I+ R ++E AA + + ++
Sbjct: 62 D-HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 120
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKR 228
HKH ++HRDLKPEN L +K ++ +K +DFGLS F+ G + E +G+ YY+APEVL++
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 180
Query: 229 NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLV 288
Y + D+WS GVILYILLCG PPF +++Q + + + +G F W VS+ AK LV
Sbjct: 181 KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV 240
Query: 289 RQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVRS----RLKQFSMMNRFKRKAL 344
+ ML +P R++A++ L HPW+ + +G + +K+F + + A+
Sbjct: 241 KLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAM 300
Query: 345 RVI-AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLR-----------NFGSQLAE 392
+ ++ ++EE +++ ++F+++D++ DG + EL G R + S E
Sbjct: 301 LFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIE 360
Query: 393 SEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELR 452
+EV ++++VD + G ++Y EF+ V + + + + E L AF FD DG+G I EL
Sbjct: 361 AEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELG 420
Query: 453 DALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMMKTGTD 496
DD T + + QE D + DG + ++EFV MM+ D
Sbjct: 421 RLFGVTEVDDET--WHQVLQECDKNNDGEVDFEEFVEMMQKICD 462
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 281 bits (720), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 264/460 (57%), Gaps = 17/460 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIM 105
K ++ + Y ++LG G +G LC D+ T A K I K + T+ + + EVA++
Sbjct: 32 KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSN-SKLLEEVAVL 90
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
K L + +I+ L + ED +LVME +GGELFD I+ R + E AA + + ++ V
Sbjct: 91 K-LLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGV 149
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
HKH ++HRDLKPEN L +K++++ +K +DFGLS F+ ++ E +G+ YY+APEV
Sbjct: 150 TYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV 209
Query: 226 LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
L++ Y + D+WS GVIL+ILL G PPF +++Q + + + +G F W NVSE AK
Sbjct: 210 LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAK 269
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPWLQN--AKKAPNVPLGDVVRS--RLKQFSMMNRFKR 341
L++QML+ D + R++A+Q LEHPW++ +KK + L + + +++F + +
Sbjct: 270 DLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQ 329
Query: 342 KALRVIAEFL-SVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNF-GSQLA-------E 392
AL +A L S EE +++ ++F+ ID + DG + EL G G ++A E
Sbjct: 330 AALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIE 389
Query: 393 SEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELR 452
SEV ++ A D + G +DY EF+ V + + + + + L AF FD+DGNG I +EL
Sbjct: 390 SEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELA 449
Query: 453 DALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMMK 492
D + T ++ +D++ DG + ++EF M++
Sbjct: 450 SVFGLDHLESKT--WKEMISGIDSNNDGDVDFEEFCKMIQ 487
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 278 bits (711), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 158/452 (34%), Positives = 248/452 (54%), Gaps = 18/452 (3%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
DRY R LG+G FG LC D+ T + A K ISKR+++ D + + REV ++K L
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 84
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +I L E ED +LV E+ GGELFD I++R ++E AA + R ++ + HK
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHK 144
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNY 230
+ ++HRDLKPEN L +K +++ ++ IDFGLS F+ ++ + +G+ YY+APEVL Y
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTY 204
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
+ D+WS GVILYILL G PPF +E + + + +G F+ W VSESAK L+R+
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 264
Query: 291 MLEPDPKLRLTAKQVLEHPWLQNAKK---APNVPLGDVVRSRLKQFSMMNRFKRKALRVI 347
L P R++A+ L+H W+Q K + +VP D ++QF + + AL
Sbjct: 265 XLTYVPSXRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYX 324
Query: 348 -AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFG-----------SQLAESEV 395
++ S +E +++ +F K D + DG + EL G + + E EV
Sbjct: 325 GSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEV 384
Query: 396 QMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDAL 455
+++AVD + G ++Y EF+ V + + + E L +AF FD D +G I EL A
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTEL--AT 442
Query: 456 MEDGADDCTDVANDIFQEVDTDKDGLISYDEF 487
+ +D ++ + EVD + DG + +DEF
Sbjct: 443 IFGVSDVDSETWKSVLSEVDKNNDGEVDFDEF 474
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 258/467 (55%), Gaps = 29/467 (6%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDD----------V 98
I + Y R+LG G +G LC +++ A K I K + DD +
Sbjct: 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI 93
Query: 99 RREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVT 158
E++++K L + +I+ L + ED +LV E EGGELF++I+ R + E AA +
Sbjct: 94 YNEISLLKSLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIM 152
Query: 159 RTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSP 218
+ I+ + HKH ++HRD+KPEN L NK +K +DFGLS FF + + +G+
Sbjct: 153 KQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTA 212
Query: 219 YYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
YY+APEVLK+ Y + D+WS GVI+YILLCG PPF +++Q + + + +G F + W
Sbjct: 213 YYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWK 272
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDV-----VRSRLKQF 333
N+S+ AK L++ ML D R TA++ L W++ K A N+ D S +++F
Sbjct: 273 NISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK--KYANNINKSDQKTLCGALSNMRKF 330
Query: 334 SMMNRFKRKALRVI-AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAG---LRNFGSQ 389
+ + A+ I ++ ++EE +++ ++FKK+D + DG + EL G LRNF ++
Sbjct: 331 EGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNE 390
Query: 390 LA-----ESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNG 444
L E EV +++ VD + G ++Y EF++V + + + ++E L +AF+ FD D +G
Sbjct: 391 LGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSG 450
Query: 445 YIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
I EL + + T ND+ E D +KD +I +DEFV+MM
Sbjct: 451 KITKEELANLFGLTSISEKT--WNDVLGEADQNKDNMIDFDEFVSMM 495
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 167/272 (61%), Gaps = 4/272 (1%)
Query: 41 LAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR 100
G K +I Y ++ +GRG +G + + + TR A K I K + D+D ++
Sbjct: 16 FQGSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQ 72
Query: 101 EVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
E+ IMK L + +I+ L E ED+ ++LVMELC GGELF+R+V + + E AA + +
Sbjct: 73 EIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKD 131
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
++ V CHK V HRDLKPENFLF +SPLK IDFGL+ FKPG+ VG+PYY
Sbjct: 132 VLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYY 191
Query: 221 MAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV 280
++P+VL+ YGPE D WSAGV++Y+LLCG PPF A ++ V I G F W NV
Sbjct: 192 VSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNV 251
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
S A+SL+R++L PK R+T+ Q LEH W +
Sbjct: 252 SPQAESLIRRLLTKSPKQRITSLQALEHEWFE 283
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 120/270 (44%), Positives = 167/270 (61%), Gaps = 4/270 (1%)
Query: 43 GVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREV 102
G K +I Y ++ +GRG +G + + + TR A K I K + D+D ++E+
Sbjct: 1 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEI 57
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
IMK L + +I+ L E ED+ ++LVMELC GGELF+R+V + + E AA + + ++
Sbjct: 58 EIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVL 116
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
V CHK V HRDLKPENFLF +SPLK IDFGL+ FKPG+ VG+PYY++
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 176
Query: 223 PEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSE 282
P+VL+ YGPE D WSAGV++Y+LLCG PPF A ++ V I G F W NVS
Sbjct: 177 PQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSP 236
Query: 283 SAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
A+SL+R++L PK R+T+ Q LEH W +
Sbjct: 237 QAESLIRRLLTKSPKQRITSLQALEHEWFE 266
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/266 (41%), Positives = 165/266 (62%), Gaps = 1/266 (0%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
DRY R LG+G FG LC D+ T + A K ISKR+++ D + + REV ++K L
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 90
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +I+ L E ED +LV E+ GGELFD I++R ++E AA + R ++ + HK
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 150
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNY 230
+ ++HRDLKPEN L +K +++ ++ IDFGLS F+ ++ + +G+ YY+APEVL Y
Sbjct: 151 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 210
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
+ D+WS GVILYILL G PPF +E + + + +G F+ W VSESAK L+R+
Sbjct: 211 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 270
Query: 291 MLEPDPKLRLTAKQVLEHPWLQNAKK 316
ML P +R++A+ L+H W+Q K
Sbjct: 271 MLTYVPSMRISARDALDHEWIQTYTK 296
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 188/340 (55%), Gaps = 10/340 (2%)
Query: 11 VAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLC 70
+ E++ S A G P + G ++ + D + V+ ELGRG + Y C
Sbjct: 13 LGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRC 72
Query: 71 IDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLV 130
+ T++ A K + K VD VR E+ ++ L + +I+ LKE E + LV
Sbjct: 73 KQKGTQKPYALKVLKK-----TVDKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTEISLV 126
Query: 131 MELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKE 190
+EL GGELFDRIV +G+Y+ER AA + I+E V H++G++HRDLKPEN L+A
Sbjct: 127 LELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAP 186
Query: 191 NSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKR-NYGPEIDIWSAGVILYILLCG 249
++PLK DFGLS + + G+P Y APE+L+ YGPE+D+WS G+I YILLCG
Sbjct: 187 DAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
Query: 250 VPPFWAE-SEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEH 308
PF+ E +Q + + IL F W VS +AK LVR+++ DPK RLT Q L+H
Sbjct: 247 FEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306
Query: 309 PWLQNAKKAPNVPLGDVVRSRLKQFSMMNRFKRKALRVIA 348
PW+ KA N D + +L++F+ + K V+A
Sbjct: 307 PWVTG--KAANFVHMDTAQKKLQEFNARRKLKAAVKAVVA 344
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 161/262 (61%), Gaps = 2/262 (0%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
+RY + LG+G FG C DR T++ A K I+K + D + REV ++K L
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKL-D 79
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +I+ L E ED ++ ++V EL GGELFD I+ R ++E AA + + + + HK
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNY 230
H ++HRDLKPEN L +K+++ +K IDFGLS F+ + + +G+ YY+APEVL+ Y
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTY 199
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
+ D+WSAGVILYILL G PPF+ ++E + + + G F W +S+ AK L+R+
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK 259
Query: 291 MLEPDPKLRLTAKQVLEHPWLQ 312
ML P LR+TA Q LEHPW+Q
Sbjct: 260 MLTFHPSLRITATQCLEHPWIQ 281
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 161/262 (61%), Gaps = 2/262 (0%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
+RY + LG+G FG C DR T++ A K I+K + D + REV ++K L
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLD- 79
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +I+ L E ED ++ ++V EL GGELFD I+ R ++E AA + + + + HK
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNY 230
H ++HRDLKPEN L +K+++ +K IDFGLS F+ + + +G+ YY+APEVL+ Y
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTY 199
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
+ D+WSAGVILYILL G PPF+ ++E + + + G F W +S+ AK L+R+
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK 259
Query: 291 MLEPDPKLRLTAKQVLEHPWLQ 312
ML P LR+TA Q LEHPW+Q
Sbjct: 260 MLTFHPSLRITATQCLEHPWIQ 281
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 107/265 (40%), Positives = 161/265 (60%), Gaps = 1/265 (0%)
Query: 47 ENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMK 106
+ + DRY ++LG G +G LC D+ T A K I K + T + + EVA++K
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
L + +I+ L E ED +LVME+ GGELFD I+ R ++E AA + + ++
Sbjct: 77 QL-DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT 135
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL 226
HKH ++HRDLKPEN L +K ++ +K +DFGLS F+ G + E +G+ YY+APEVL
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 195
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKS 286
++ Y + D+WS GVILYILLCG PPF +++Q + + + +G F W VS+ AK
Sbjct: 196 RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQ 255
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWL 311
LV+ ML +P R++A++ L HPW+
Sbjct: 256 LVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/266 (40%), Positives = 163/266 (61%), Gaps = 4/266 (1%)
Query: 47 ENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMK 106
E+I D Y LG G F L D+ T++L+A K I+K+ L + E+A++
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG--SMENEIAVL- 70
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
H K+ +IV+L + E ++L+M+L GGELFDRIV +G YTER A+ + +++ V+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL 226
H G++HRDLKPEN L+ + E+S + DFGLS PG S G+P Y+APEVL
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 227 -KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
++ Y +D WS GVI YILLCG PPF+ E++ + + IL+ +F W ++S+SAK
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPWL 311
+R ++E DP+ R T +Q L+HPW+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 211 bits (537), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/266 (40%), Positives = 162/266 (60%), Gaps = 4/266 (1%)
Query: 47 ENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMK 106
E+I D Y LG G F L D+ T++L+A K I+K L + E+A++
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVL- 70
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
H K+ +IV+L + E ++L+M+L GGELFDRIV +G YTER A+ + +++ V+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL 226
H G++HRDLKPEN L+ + E+S + DFGLS PG S G+P Y+APEVL
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 227 -KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
++ Y +D WS GVI YILLCG PPF+ E++ + + IL+ +F W ++S+SAK
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPWL 311
+R ++E DP+ R T +Q L+HPW+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/266 (40%), Positives = 162/266 (60%), Gaps = 4/266 (1%)
Query: 47 ENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMK 106
E+I D Y LG G F L D+ T++L+A K I+K L + E+A++
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVL- 70
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
H K+ +IV+L + E ++L+M+L GGELFDRIV +G YTER A+ + +++ V+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL 226
H G++HRDLKPEN L+ + E+S + DFGLS PG S G+P Y+APEVL
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 227 -KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
++ Y +D WS GVI YILLCG PPF+ E++ + + IL+ +F W ++S+SAK
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPWL 311
+R ++E DP+ R T +Q L+HPW+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/266 (40%), Positives = 162/266 (60%), Gaps = 4/266 (1%)
Query: 47 ENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMK 106
E+I D Y LG G F L D+ T++L+A K I+K L + E+A++
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVL- 70
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
H K+ +IV+L + E ++L+M+L GGELFDRIV +G YTER A+ + +++ V+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL 226
H G++HRDLKPEN L+ + E+S + DFGLS PG S G+P Y+APEVL
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 227 -KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
++ Y +D WS GVI YILLCG PPF+ E++ + + IL+ +F W ++S+SAK
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPWL 311
+R ++E DP+ R T +Q L+HPW+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 175/299 (58%), Gaps = 5/299 (1%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D Y V ELG+G F V C+ + T A K I+ +KL +A D + RE I + L +
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL-Q 86
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +IV L ++ ++++ +LV +L GGELF+ IVAR Y+E A+ + I+E + CH
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRN- 229
+G++HR+LKPEN L A+K + + +K DFGL+I E + G+P Y++PEVLK++
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +DIW+ GVILYILL G PPFW E + + I G D+ W V+ AKSL+
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 266
Query: 290 QMLEPDPKLRLTAKQVLEHPWLQNAKK-APNVPLGDVVRSRLKQFSMMNRFKRKALRVI 347
ML +PK R+TA Q L+ PW+ N ++ A + D V LK+F+ + K L +
Sbjct: 267 SMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDC-LKKFNARRKLKGAILTTM 324
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 162/266 (60%), Gaps = 4/266 (1%)
Query: 47 ENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMK 106
E+I+ + LG G F L ++ T +L A K I K+ L+ + E+A+++
Sbjct: 18 EDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKES--SIENEIAVLR 75
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+ K+ +IV+L++ E N ++LVM+L GGELFDRIV +G YTE+ A+ + R +++ V
Sbjct: 76 KI-KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVY 134
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL 226
H+ G++HRDLKPEN L+ ++ E S + DFGLS G+ S G+P Y+APEVL
Sbjct: 135 YLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVL 194
Query: 227 -KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
++ Y +D WS GVI YILLCG PPF+ E++ + + IL+ +F W ++S+SAK
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAK 254
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPWL 311
+R ++E DP R T +Q HPW+
Sbjct: 255 DFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 162/267 (60%), Gaps = 3/267 (1%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D Y V ELG+G F V C+ + T A K I+ +KL +A D + RE I + L +
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL-Q 63
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +IV L ++ ++++ +LV +L GGELF+ IVAR Y+E A+ + I+E + CH
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRN- 229
+G++HR+LKPEN L A+K + + +K DFGL+I E + G+P Y++PEVLK++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +DIW+ GVILYILL G PPFW E + + I G D+ W V+ AKSL+
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243
Query: 290 QMLEPDPKLRLTAKQVLEHPWLQNAKK 316
ML +PK R+TA Q L+ PW+ N ++
Sbjct: 244 SMLTVNPKKRITADQALKVPWICNRER 270
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/264 (41%), Positives = 160/264 (60%), Gaps = 3/264 (1%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D Y V ELG+G F V C+ + T A K I+ +KL +A D + RE I + L +
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL-Q 63
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +IV L ++ ++++ +LV +L GGELF+ IVAR Y+E A+ + I+E + CH
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRN- 229
+G++HR+LKPEN L A+K + + +K DFGL+I E + G+P Y++PEVLK++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +DIW+ GVILYILL G PPFW E + + I G D+ W V+ AKSL+
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243
Query: 290 QMLEPDPKLRLTAKQVLEHPWLQN 313
ML +PK R+TA Q L+ PW+ N
Sbjct: 244 SMLTVNPKKRITADQALKVPWICN 267
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 162/267 (60%), Gaps = 3/267 (1%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D Y V ELG+G F V C+ + T A K I+ +KL +A D + RE I + L +
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL-Q 62
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +IV L ++ ++++ +LV +L GGELF+ IVAR Y+E A+ + I+E + CH
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRN- 229
+G++HR+LKPEN L A+K + + +K DFGL+I E + G+P Y++PEVLK++
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +DIW+ GVILYILL G PPFW E + + I G D+ W V+ AKSL+
Sbjct: 183 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 242
Query: 290 QMLEPDPKLRLTAKQVLEHPWLQNAKK 316
ML +PK R+TA Q L+ PW+ N ++
Sbjct: 243 SMLTVNPKKRITADQALKVPWICNRER 269
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/332 (35%), Positives = 186/332 (56%), Gaps = 7/332 (2%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
++ D Y + ELG+G F V C+ T + A K I+ +KL +A D + RE I +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARICRL 59
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L K+ +IV L ++ ++ +LV +L GGELF+ IVAR +Y+E A+ + I+E V
Sbjct: 60 L-KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER-FSEIVGSPYYMAPEVL 226
CH +G++HRDLKPEN L A+K + + +K DFGL+I + ++ + G+P Y++PEVL
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 227 KRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
+++ YG +D+W+ GVILYILL G PPFW E + + Q I G DF W V+ AK
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVRSRLKQFSMMNRFKRKALR 345
L+ +ML +P R+TA + L+HPW+ ++ LK+F+ + K
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGA--- 295
Query: 346 VIAEFLSVEEVEDIKEMFKKIDSDNDGVVSTD 377
++ L+ K + KK D + S++
Sbjct: 296 ILTTMLATRNFSAAKSLLKKPDGVKESTESSN 327
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 158/265 (59%), Gaps = 6/265 (2%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
NI ++ LG G F +L R T +L A K I K A + E+A++K
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP---AFRDSSLENEIAVLKK 62
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
+ K+ +IV+L++ E +LVM+L GGELFDRI+ RG YTE+ A+ V + ++ V+
Sbjct: 63 I-KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKY 121
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL- 226
H++G++HRDLKPEN L+ +ENS + DFGLS + G S G+P Y+APEVL
Sbjct: 122 LHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLA 180
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKS 286
++ Y +D WS GVI YILLCG PPF+ E+E + + I G +F+ W ++SESAK
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKD 240
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWL 311
+ +LE DP R T ++ L HPW+
Sbjct: 241 FICHLLEKDPNERYTCEKALSHPWI 265
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 177/296 (59%), Gaps = 6/296 (2%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
++ D Y + ++G+G F V C+ T A K I+ +KL +A D + RE I +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL-SARDHQKLEREARICR- 58
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L K+S+IV L ++ ++ +LV +L GGELF+ IVAR +Y+E A+ + I+E V
Sbjct: 59 LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER-FSEIVGSPYYMAPEVL 226
CH+ GV+HRDLKPEN L A+K + + +K DFGL+I + ++ + G+P Y++PEVL
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 227 KRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
++ YG +DIW+ GVILYILL G PPFW E + + Q I G DF W V+ AK
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPWL-QNAKKAPNVPLGDVVRSRLKQFSMMNRFK 340
+L+ QML +P R+TA + L+HPW+ Q + A + + V LK+F+ + K
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVEC-LKKFNARRKLK 293
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 162/264 (61%), Gaps = 6/264 (2%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D Y + ELG+G F V C+ + + A K I+ +KL +A D + RE I + L K
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL-SARDHQKLEREARICR-LLK 88
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +IV L ++ ++ +LV +L GGELF+ IVAR +Y+E A+ I+E V H+
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER--FSEIVGSPYYMAPEVLKR 228
H ++HRDLKPEN L A+K + + +K DFGL+I + GE+ + G+P Y++PEVL++
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ-GEQQAWFGFAGTPGYLSPEVLRK 207
Query: 229 N-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSL 287
+ YG +DIW+ GVILYILL G PPFW E + + Q I G DF W V+ AK+L
Sbjct: 208 DPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNL 267
Query: 288 VRQMLEPDPKLRLTAKQVLEHPWL 311
+ QML +P R+TA Q L+HPW+
Sbjct: 268 INQMLTINPAKRITADQALKHPWV 291
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/266 (40%), Positives = 164/266 (61%), Gaps = 4/266 (1%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
++ D Y + ELG+G F V C+ T + A K I+ +KL +A D + RE I +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARICR- 58
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L K+ +IV L ++ ++ +LV +L GGELF+ IVAR +Y+E A+ + I+E V
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER-FSEIVGSPYYMAPEVL 226
CH +G++HRDLKPEN L A+K + + +K DFGL+I + ++ + G+P Y++PEVL
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 227 KRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
+++ YG +D+W+ GVILYILL G PPFW E + + Q I G DF W V+ AK
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPWL 311
L+ +ML +P R+TA + L+HPW+
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWI 264
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 189/337 (56%), Gaps = 8/337 (2%)
Query: 41 LAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR 100
+A + + Y + ELG+G F V C+ + A I+ +KL +A D + R
Sbjct: 1 MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLER 59
Query: 101 EVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
E I + L K+ +IV L ++ ++ +L+ +L GGELF+ IVAR +Y+E A+ +
Sbjct: 60 EARICR-LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQ 118
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER--FSEIVGSP 218
I+E V CH+ GV+HR+LKPEN L A+K + + +K DFGL+I + GE+ + G+P
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTP 177
Query: 219 YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y++PEVL+++ YG +D+W+ GVILYILL G PPFW E + + Q I G DF W
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW 237
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVRSRLKQFSMMN 337
V+ AK L+ +ML +P R+TA + L+HPW+ + + LK+F+
Sbjct: 238 DTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARR 297
Query: 338 RFKRKALRVI--AEFLSVEEVEDIKEMFKKIDSDNDG 372
+ K L V+ SV + E IK + I++ ++G
Sbjct: 298 KLKGAILTVMLATRNFSVRKQEIIKVTEQLIEAISNG 334
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 172/301 (57%), Gaps = 6/301 (1%)
Query: 43 GVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREV 102
G + Y + ELG+G F V C+ + A K I+ +KL +A D + RE
Sbjct: 14 GTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL-SARDHQKLEREA 72
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
I + L K+ +IV L ++ ++ +L+ +L GGELF+ IVAR +Y+E A+ + I+
Sbjct: 73 RICR-LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL 131
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER--FSEIVGSPYY 220
E V CH+ GV+HRDLKPEN L A+K + + +K DFGL+I + GE+ + G+P Y
Sbjct: 132 EAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGY 190
Query: 221 MAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN 279
++PEVL+++ YG +D+W+ GVILYILL G PPFW E + + Q I G DF W
Sbjct: 191 LSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT 250
Query: 280 VSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVRSRLKQFSMMNRF 339
V+ AK L+ +ML +P R+TA + L+HPW+ + + LK+F+ +
Sbjct: 251 VTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKL 310
Query: 340 K 340
K
Sbjct: 311 K 311
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 178/309 (57%), Gaps = 12/309 (3%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA--VDIDDVRREVAIMK 106
ED Y + +G+G F V CI+R+T + A K + K ++ + +D++RE +I
Sbjct: 22 FEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC- 80
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH----YTERAAAAVTRTIV 162
H+ K+ IV L E D +++V E +G +L IV R Y+E A+ R I+
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYM 221
E ++ CH + +IHRD+KPEN L A+K+ ++P+K DFG++I + G VG+P++M
Sbjct: 141 EALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFM 200
Query: 222 APEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV 280
APEV+KR YG +D+W GVIL+ILL G PF+ E+ + + I++G W ++
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQWSHI 259
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK-APNVPLGDVVRSRLKQFSMMNRF 339
SESAK LVR+ML DP R+T + L HPWL+ + A + L + V +L++F+ +
Sbjct: 260 SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVE-QLRKFNARRKL 318
Query: 340 KRKALRVIA 348
K L ++
Sbjct: 319 KGAVLAAVS 327
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 175/309 (56%), Gaps = 12/309 (3%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA--VDIDDVRREVAIMK 106
ED Y + +G+G F V CI+R+T + A K + K ++ + +D++RE +I
Sbjct: 24 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC- 82
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH----YTERAAAAVTRTIV 162
H+ K+ IV L E D +++V E +G +L IV R Y+E A+ R I+
Sbjct: 83 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 142
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYM 221
E ++ CH + +IHRD+KP L A+K+ ++P+K FG++I + G VG+P++M
Sbjct: 143 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFM 202
Query: 222 APEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV 280
APEV+KR YG +D+W GVIL+ILL G PF+ E+ + + I++G W ++
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQWSHI 261
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK-APNVPLGDVVRSRLKQFSMMNRF 339
SESAK LVR+ML DP R+T + L HPWL+ + A + L + V +L++F+ +
Sbjct: 262 SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVE-QLRKFNARRKL 320
Query: 340 KRKALRVIA 348
K L ++
Sbjct: 321 KGAVLAAVS 329
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 175/309 (56%), Gaps = 12/309 (3%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA--VDIDDVRREVAIMK 106
ED Y + +G+G F V CI+R+T + A K + K ++ + +D++RE +I
Sbjct: 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC- 80
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH----YTERAAAAVTRTIV 162
H+ K+ IV L E D +++V E +G +L IV R Y+E A+ R I+
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYM 221
E ++ CH + +IHRD+KP L A+K+ ++P+K FG++I + G VG+P++M
Sbjct: 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFM 200
Query: 222 APEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV 280
APEV+KR YG +D+W GVIL+ILL G PF+ E+ + + I++G W ++
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQWSHI 259
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK-APNVPLGDVVRSRLKQFSMMNRF 339
SESAK LVR+ML DP R+T + L HPWL+ + A + L + V +L++F+ +
Sbjct: 260 SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFNARRKL 318
Query: 340 KRKALRVIA 348
K L ++
Sbjct: 319 KGAVLAAVS 327
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 155/275 (56%), Gaps = 10/275 (3%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL---RTAVDIDDVRREVAIM 105
+ED Y + ELG G+F + C + T + A K I KR+L R V +++ REV I+
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+ + ++ +I++L + E+ V L++EL GGELFD + + TE A + I++ V
Sbjct: 63 REI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYMAPE 224
H + H DLKPEN + +K +P +K IDFG++ + G F I G+P ++APE
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
Query: 225 VLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS 281
++ NY P E D+WS GVI YILL G PF E++Q I DF + + N S
Sbjct: 182 IV--NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 239
Query: 282 ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E AK +R++L DPK R+T Q LEH W++ ++
Sbjct: 240 ELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 155/274 (56%), Gaps = 10/274 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL---RTAVDIDDVRREV 102
+E++ED Y + ELG G+F + C + T + A K I KR+L R V +++ REV
Sbjct: 7 QEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREV 66
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
I++ + ++ +I++L + E+ V L++EL GGELFD + + TE A + I+
Sbjct: 67 NILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 125
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
+ V H + H DLKPEN + +K +P +K IDFG++ + G F I G+P ++
Sbjct: 126 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFV 185
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF E++Q I DF + +
Sbjct: 186 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS 243
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
N SE AK +R++L DPK R+ Q LEH W++
Sbjct: 244 NTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 154/275 (56%), Gaps = 10/275 (3%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL---RTAVDIDDVRREVAIM 105
+ED Y + ELG G+F + C + T + A K I KR+L R V +++ REV I+
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+ + ++ +I++L + E+ V L++EL GGELFD + + TE A + I++ V
Sbjct: 84 REI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 142
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYMAPE 224
H + H DLKPEN + +K +P +K IDFG++ + G F I G+P ++APE
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 202
Query: 225 VLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS 281
++ NY P E D+WS GVI YILL G PF E++Q I DF + + N S
Sbjct: 203 IV--NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 260
Query: 282 ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E AK +R++L DPK R+ Q LEH W++ ++
Sbjct: 261 ELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIRR 295
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 155/274 (56%), Gaps = 10/274 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
+EN++D Y ELG G+F V C ++ T A K I KR+ +++ V +D+ REV
Sbjct: 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I+K + ++ ++++L E E+ V L++EL GGELFD + + TE A + I+
Sbjct: 66 SILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
V H + H DLKPEN + ++ P +K IDFGL+ G F I G+P ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q + +F+ + +
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
N S AK +R++L DPK R+T + L+HPW++
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 156/271 (57%), Gaps = 8/271 (2%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
I+D ++ R+LG G FG +L +R + K+I+K R+ V ++ + E+ ++K
Sbjct: 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKD--RSQVPMEQIEAEIEVLKS 76
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIV---ARGH-YTERAAAAVTRTIVE 163
L + +I+ + E ED + +++VME CEGGEL +RIV ARG +E A + + ++
Sbjct: 77 L-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMN 135
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAP 223
+ H V+H+DLKPEN LF + +SP+K IDFGL+ FK E + G+ YMAP
Sbjct: 136 ALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAP 195
Query: 224 EVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSES 283
EV KR+ + DIWSAGV++Y LL G PF S + V Q ++ + P ++
Sbjct: 196 EVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQ 254
Query: 284 AKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
A L++QML DP+ R +A QVL H W + A
Sbjct: 255 AVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 166/298 (55%), Gaps = 12/298 (4%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
+EN++D Y ELG G+F V C ++ T A K I KR+ +++ V +D+ REV
Sbjct: 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I+K + ++ ++++L E E+ V L++EL GGELFD + + TE A + I+
Sbjct: 66 SILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
V H + H DLKPEN + ++ P +K IDFGL+ G F I G+P ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q + +F+ + +
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL--QNAKKAPNVPLGDVVRSRLKQFS 334
N S AK +R++L DPK R+T + L+HPW+ ++ ++A + V + K+F+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKFA 300
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 155/274 (56%), Gaps = 10/274 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
+EN++D Y ELG G+F V C ++ T A K I KR+ +++ V +D+ REV
Sbjct: 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I+K + ++ ++++L E E+ V L++EL GGELFD + + TE A + I+
Sbjct: 66 SILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
V H + H DLKPEN + ++ P +K IDFGL+ G F I G+P ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q + +F+ + +
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
N S AK +R++L DPK R+T + L+HPW++
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 155/274 (56%), Gaps = 10/274 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
+EN++D Y ELG G+F V C ++ T A K I KR+ +++ V +D+ REV
Sbjct: 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I+K + ++ ++++L E E+ V L++EL GGELFD + + TE A + I+
Sbjct: 66 SILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
V H + H DLKPEN + ++ P +K IDFGL+ G F I G+P ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFV 184
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q + +F+ + +
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
N S AK +R++L DPK R+T + L+HPW++
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 155/274 (56%), Gaps = 10/274 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
+EN++D Y ELG G+F V C ++ T A K I KR+ +++ V +D+ REV
Sbjct: 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I+K + ++ ++++L E E+ V L++EL GGELFD + + TE A + I+
Sbjct: 66 SILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
V H + H DLKPEN + ++ P +K IDFGL+ G F I G+P ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q + +F+ + +
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
N S AK +R++L DPK R+T + L+HPW++
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 155/274 (56%), Gaps = 10/274 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
+EN++D Y ELG G+F V C ++ T A K I KR+ +++ V +D+ REV
Sbjct: 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I+K + ++ ++++L E E+ V L++EL GGELFD + + TE A + I+
Sbjct: 66 SILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
V H + H DLKPEN + ++ P +K IDFGL+ G F I G+P ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q + +F+ + +
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
N S AK +R++L DPK R+T + L+HPW++
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 155/274 (56%), Gaps = 10/274 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
+EN++D Y ELG G+F V C ++ T A K I KR+ +++ V +D+ REV
Sbjct: 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I+K + ++ ++++L E E+ V L++EL GGELFD + + TE A + I+
Sbjct: 66 SILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
V H + H DLKPEN + ++ P +K IDFGL+ G F I G+P ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q + +F+ + +
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
N S AK +R++L DPK R+T + L+HPW++
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 155/274 (56%), Gaps = 10/274 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
+EN++D Y ELG G+F V C ++ T A K I KR+ +++ V +D+ REV
Sbjct: 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I+K + ++ ++++L E E+ V L++EL GGELFD + + TE A + I+
Sbjct: 66 SILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
V H + H DLKPEN + ++ P +K IDFGL+ G F I G+P ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q + +F+ + +
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
N S AK +R++L DPK R+T + L+HPW++
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 155/274 (56%), Gaps = 10/274 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
+EN++D Y ELG G+F V C ++ T A K I KR+ +++ V +D+ REV
Sbjct: 5 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 64
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I+K + ++ ++++L E E+ V L++EL GGELFD + + TE A + I+
Sbjct: 65 SILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 123
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
V H + H DLKPEN + ++ P +K IDFGL+ G F I G+P ++
Sbjct: 124 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 183
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q + +F+ + +
Sbjct: 184 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
N S AK +R++L DPK R+T + L+HPW++
Sbjct: 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 155/274 (56%), Gaps = 10/274 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
+EN++D Y ELG G+F V C ++ T A K I KR+ +++ V +D+ REV
Sbjct: 5 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 64
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I+K + ++ ++++L E E+ V L++EL GGELFD + + TE A + I+
Sbjct: 65 SILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 123
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
V H + H DLKPEN + ++ P +K IDFGL+ G F I G+P ++
Sbjct: 124 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 183
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q + +F+ + +
Sbjct: 184 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
N S AK +R++L DPK R+T + L+HPW++
Sbjct: 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 155/274 (56%), Gaps = 10/274 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
+EN++D Y ELG G+F V C ++ T A K I KR+ +++ V +D+ REV
Sbjct: 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I+K + ++ ++++L E E+ V L++EL GGELFD + + TE A + I+
Sbjct: 66 SILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
V H + H DLKPEN + ++ P +K IDFGL+ G F I G+P ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q + +F+ + +
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
N S AK +R++L DPK R+T + L+HPW++
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 155/274 (56%), Gaps = 10/274 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
+EN++D Y ELG G+F V C ++ T A K I KR+ +++ V +D+ REV
Sbjct: 6 QENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I+K + ++ ++++L E E+ V L++EL GGELFD + + TE A + I+
Sbjct: 66 SILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
V H + H DLKPEN + ++ P +K IDFGL+ G F I G+P ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q + +F+ + +
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
N S AK +R++L DPK R+T + L+HPW++
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 150/266 (56%), Gaps = 15/266 (5%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVD-IDDVR----REVAIMKHLPKNSS 113
+GRG V C+ R T A K + R + + +++VR RE I++ + +
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 114 IVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
I++L ++ E + + LV +L GELFD + + +E+ ++ R+++E V H + +
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNI 221
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK------ 227
+HRDLKPEN L +N ++ DFG S +PGE+ E+ G+P Y+APE+LK
Sbjct: 222 VHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDET 278
Query: 228 -RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKS 286
YG E+D+W+ GVIL+ LL G PPFW + + + I+ G F W + S + K
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKD 338
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQ 312
L+ ++L+ DP+ RLTA+Q L+HP+ +
Sbjct: 339 LISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 154/274 (56%), Gaps = 10/274 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
+EN++D Y ELG G F V C ++ T A K I KR+ +++ V +D+ REV
Sbjct: 6 QENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I+K + ++ ++++L E E+ V L++EL GGELFD + + TE A + I+
Sbjct: 66 SILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
V H + H DLKPEN + ++ P +K IDFGL+ G F I G+P ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q + +F+ + +
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
N S AK +R++L DPK R+T + L+HPW++
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 154/274 (56%), Gaps = 10/274 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
+EN++D Y ELG G+F V C ++ T A K I KR+ +++ V +D+ REV
Sbjct: 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I+K + ++ ++++L E E+ V L+ EL GGELFD + + TE A + I+
Sbjct: 66 SILKEI-QHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
V H + H DLKPEN + ++ P +K IDFGL+ G F I G+P ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q + +F+ + +
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
N S AK +R++L DPK R+T + L+HPW++
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I+D + + LG G G ++ T+E A K + D RREV +
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRA 65
Query: 109 PKNSSIVSLKEACEDDNA----VHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTIV 162
+ IV + + E+ A + +VME +GGELF RI RG +TER A+ + ++I
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
E +Q H + HRD+KPEN L+ +K+ N+ LK DFG + +E +PYY+A
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVA 185
Query: 223 PEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAES----EQGVAQAILRGLIDFKRDPW 277
PEVL Y D+WS GVI+YILLCG PPF++ G+ I G +F W
Sbjct: 186 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 245
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
VSE K L+R +L+ +P R+T + + HPW+ + K P PL
Sbjct: 246 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 290
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 152/287 (52%), Gaps = 12/287 (4%)
Query: 37 PITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL-----RT 91
P+ V + + D Y++ + LG G G L +R T + +A K ISKRK R
Sbjct: 2 PLGSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE 61
Query: 92 AVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTE 151
A +V E+ I+K L + I+ +K + ++ ++V+EL EGGELFD++V E
Sbjct: 62 ADPALNVETEIEILKKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKE 119
Query: 152 RAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF 211
++ VQ H++G+IHRDLKPEN L ++++E+ +K DFG S
Sbjct: 120 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 179
Query: 212 SEIVGSPYYMAPEVL----KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQ-GVAQAIL 266
+ G+P Y+APEVL Y +D WS GVIL+I L G PPF Q + I
Sbjct: 180 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 239
Query: 267 RGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
G +F + W VSE A LV+++L DPK R T ++ L HPWLQ+
Sbjct: 240 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL-----RTAVDIDDVRREVA 103
+ D Y++ + LG G G L +R T + +A K ISKRK R A +V E+
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE 163
I+K L + I+ +K + ++ ++V+EL EGGELFD++V E ++
Sbjct: 68 ILKKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAP 223
VQ H++G+IHRDLKPEN L ++++E+ +K DFG S + G+P Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 224 EVL----KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQ-GVAQAILRGLIDFKRDPWP 278
EVL Y +D WS GVIL+I L G PPF Q + I G +F + W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
VSE A LV+++L DPK R T ++ L HPWLQ+
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL-----RTAVDIDDVRREVA 103
+ D Y++ + LG G G L +R T + +A K ISKRK R A +V E+
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE 163
I+K L + I+ +K + ++ ++V+EL EGGELFD++V E ++
Sbjct: 68 ILKKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAP 223
VQ H++G+IHRDLKPEN L ++++E+ +K DFG S + G+P Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 224 EVL----KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQ-GVAQAILRGLIDFKRDPWP 278
EVL Y +D WS GVIL+I L G PPF Q + I G +F + W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
VSE A LV+++L DPK R T ++ L HPWLQ+
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL-----RTAVDIDDVRREVA 103
+ D Y++ + LG G G L +R T + +A K ISKRK R A +V E+
Sbjct: 7 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE 163
I+K L + I+ +K + ++ ++V+EL EGGELFD++V E ++
Sbjct: 67 ILKKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAP 223
VQ H++G+IHRDLKPEN L ++++E+ +K DFG S + G+P Y+AP
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 184
Query: 224 EVL----KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQ-GVAQAILRGLIDFKRDPWP 278
EVL Y +D WS GVIL+I L G PPF Q + I G +F + W
Sbjct: 185 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 244
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
VSE A LV+++L DPK R T ++ L HPWLQ+
Sbjct: 245 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL-----RTAVDIDDVRREVA 103
+ D Y++ + LG G G L +R T + +A K ISKRK R A +V E+
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE 163
I+K L + I+ +K + ++ ++V+EL EGGELFD++V E ++
Sbjct: 68 ILKKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAP 223
VQ H++G+IHRDLKPEN L ++++E+ +K DFG S + G+P Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 224 EVL----KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQ-GVAQAILRGLIDFKRDPWP 278
EVL Y +D WS GVIL+I L G PPF Q + I G +F + W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
VSE A LV+++L DPK R T ++ L HPWLQ+
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 158/310 (50%), Gaps = 25/310 (8%)
Query: 54 LVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSS 113
L D+ LG G F + C+ + + + A K ISKR + ++E+ +K + +
Sbjct: 14 LKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEA------NTQKEITALKLCEGHPN 67
Query: 114 IVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
IV L E D LVMEL GGELF+RI + H++E A+ + R +V V H GV
Sbjct: 68 IVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGV 127
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIFFKP-GERFSEIVGSPYYMAPEVLKRN-YG 231
+HRDLKPEN LF ++ +N +K IDFG + P + + +Y APE+L +N Y
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYD 187
Query: 232 PEIDIWSAGVILYILLCGVPPFWAE-------SEQGVAQAILRGLIDFKRDPWPNVSESA 284
D+WS GVILY +L G PF + S + + I +G F+ + W NVS+ A
Sbjct: 188 ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEA 247
Query: 285 KSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL---------GDVVRSRLK-QFS 334
K L++ +L DP RL + + WLQ+ + + PL G V + +K F
Sbjct: 248 KDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFH 307
Query: 335 MMNRFKRKAL 344
N++KR+
Sbjct: 308 AFNKYKREGF 317
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I+D + + LG G G ++ T+E A K + D RREV +
Sbjct: 66 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRA 117
Query: 109 PKNSSIVSLKEACEDDNA----VHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTIV 162
+ IV + + E+ A + +VME +GGELF RI RG +TER A+ + ++I
Sbjct: 118 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 177
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
E +Q H + HRD+KPEN L+ +K+ N+ LK DFG + + +PYY+A
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 237
Query: 223 PEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAES----EQGVAQAILRGLIDFKRDPW 277
PEVL Y D+WS GVI+YILLCG PPF++ G+ I G +F W
Sbjct: 238 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 297
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
VSE K L+R +L+ +P R+T + + HPW+ + K P PL
Sbjct: 298 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 342
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I+D + + LG G G ++ T+E A K + D RREV +
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRA 111
Query: 109 PKNSSIVSLKEACEDDNA----VHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTIV 162
+ IV + + E+ A + +VME +GGELF RI RG +TER A+ + ++I
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
E +Q H + HRD+KPEN L+ +K+ N+ LK DFG + + +PYY+A
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 223 PEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAES----EQGVAQAILRGLIDFKRDPW 277
PEVL Y D+WS GVI+YILLCG PPF++ G+ I G +F W
Sbjct: 232 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 291
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
VSE K L+R +L+ +P R+T + + HPW+ + K P PL
Sbjct: 292 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 336
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I+D + + LG G G ++ T+E A K + D RREV +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRA 67
Query: 109 PKNSSIVSLKEACEDDNA----VHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTIV 162
+ IV + + E+ A + +VME +GGELF RI RG +TER A+ + ++I
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
E +Q H + HRD+KPEN L+ +K+ N+ LK DFG + + +PYY+A
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 223 PEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAES----EQGVAQAILRGLIDFKRDPW 277
PEVL Y D+WS GVI+YILLCG PPF++ G+ I G +F W
Sbjct: 188 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 247
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
VSE K L+R +L+ +P R+T + + HPW+ + K P PL
Sbjct: 248 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 292
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I+D + + LG G G ++ T+E A K + D RREV +
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRA 81
Query: 109 PKNSSIVSLKEACEDDNA----VHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTIV 162
+ IV + + E+ A + +VME +GGELF RI RG +TER A+ + ++I
Sbjct: 82 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 141
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
E +Q H + HRD+KPEN L+ +K+ N+ LK DFG + + +PYY+A
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 201
Query: 223 PEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAES----EQGVAQAILRGLIDFKRDPW 277
PEVL Y D+WS GVI+YILLCG PPF++ G+ I G +F W
Sbjct: 202 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 261
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
VSE K L+R +L+ +P R+T + + HPW+ + K P PL
Sbjct: 262 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 306
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 147/291 (50%), Gaps = 25/291 (8%)
Query: 46 KENIEDRYLVDRE-LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
K + D Y + ++ LG G G C R T + K L+ D R+EV
Sbjct: 23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQ--------KCALKLLYDSPKARQEVDH 74
Query: 105 MKHLPKNSSIVSLKEACED----DNAVHLVMELCEGGELFDRIVARGH--YTERAAAAVT 158
IV + + E+ + ++ME EGGELF RI RG +TER AA +
Sbjct: 75 HWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIM 134
Query: 159 RTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER--FSEIVG 216
R I +Q H H + HRD+KPEN L+ +K++++ LK DFG F K +
Sbjct: 135 RDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNALQTPCY 191
Query: 217 SPYYMAPEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR----GLID 271
+PYY+APEVL Y D+WS GVI+YILLCG PPF++ + Q ++ + R G
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG 251
Query: 272 FKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
F W VSE AK L+R +L+ DP RLT Q + HPW+ + P PL
Sbjct: 252 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 302
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I+D + + LG G G ++ T+E A K + D RREV +
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRA 72
Query: 109 PKNSSIVSLKEACEDDNA----VHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTIV 162
+ IV + + E+ A + +VME +GGELF RI RG +TER A+ + ++I
Sbjct: 73 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 132
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
E +Q H + HRD+KPEN L+ +K+ N+ LK DFG + + +PYY+A
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 192
Query: 223 PEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAES----EQGVAQAILRGLIDFKRDPW 277
PEVL Y D+WS GVI+YILLCG PPF++ G+ I G +F W
Sbjct: 193 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 252
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
VSE K L+R +L+ +P R+T + + HPW+ + K P PL
Sbjct: 253 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 297
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL-----RTAVDIDDVRREVA 103
+ D Y++ + LG G G L +R T + +A + ISKRK R A +V E+
Sbjct: 147 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 206
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE 163
I+K L + I+ +K + ++ ++V+EL EGGELFD++V E ++
Sbjct: 207 ILKKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAP 223
VQ H++G+IHRDLKPEN L ++++E+ +K DFG S + G+P Y+AP
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 324
Query: 224 EVL----KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQ-GVAQAILRGLIDFKRDPWP 278
EVL Y +D WS GVIL+I L G PPF Q + I G +F + W
Sbjct: 325 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 384
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
VSE A LV+++L DPK R T ++ L HPWLQ+
Sbjct: 385 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I+D + + LG G G ++ T+E A K + D RREV +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRA 67
Query: 109 PKNSSIVSLKEACEDDNA----VHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTIV 162
+ IV + + E+ A + +VME +GGELF RI RG +TER A+ + ++I
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
E +Q H + HRD+KPEN L+ +K+ N+ LK DFG + + +PYY+A
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 223 PEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAES----EQGVAQAILRGLIDFKRDPW 277
PEVL Y D+WS GVI+YILLCG PPF++ G+ I G +F W
Sbjct: 188 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 247
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
VSE K L+R +L+ +P R+T + + HPW+ + K P PL
Sbjct: 248 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 292
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 147/291 (50%), Gaps = 25/291 (8%)
Query: 46 KENIEDRYLVDRE-LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
K + D Y + ++ LG G G C R T + A L+ D R+EV
Sbjct: 4 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCA--------LKLLYDSPKARQEVDH 55
Query: 105 MKHLPKNSSIVSLKEACED----DNAVHLVMELCEGGELFDRIVARGH--YTERAAAAVT 158
IV + + E+ + ++ME EGGELF RI RG +TER AA +
Sbjct: 56 HWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIM 115
Query: 159 RTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER--FSEIVG 216
R I +Q H H + HRD+KPEN L+ +K++++ LK DFG F K +
Sbjct: 116 RDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNALQTPCY 172
Query: 217 SPYYMAPEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR----GLID 271
+PYY+APEVL Y D+WS GVI+YILLCG PPF++ + Q ++ + R G
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG 232
Query: 272 FKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
F W VSE AK L+R +L+ DP RLT Q + HPW+ + P PL
Sbjct: 233 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 283
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I+D + + LG G G ++ T+E A K + D RREV +
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRA 71
Query: 109 PKNSSIVSLKEACEDDNA----VHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTIV 162
+ IV + + E+ A + +VME +GGELF RI RG +TER A+ + ++I
Sbjct: 72 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 131
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
E +Q H + HRD+KPEN L+ +K+ N+ LK DFG + + +PYY+A
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 191
Query: 223 PEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAES----EQGVAQAILRGLIDFKRDPW 277
PEVL Y D+WS GVI+YILLCG PPF++ G+ I G +F W
Sbjct: 192 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 251
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
VSE K L+R +L+ +P R+T + + HPW+ + K P PL
Sbjct: 252 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 296
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I+D + + LG G G ++ T+E A K + D RREV +
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRA 66
Query: 109 PKNSSIVSLKEACEDDNA----VHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTIV 162
+ IV + + E+ A + +VME +GGELF RI RG +TER A+ + ++I
Sbjct: 67 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 126
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
E +Q H + HRD+KPEN L+ +K+ N+ LK DFG + + +PYY+A
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 186
Query: 223 PEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAES----EQGVAQAILRGLIDFKRDPW 277
PEVL Y D+WS GVI+YILLCG PPF++ G+ I G +F W
Sbjct: 187 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 246
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
VSE K L+R +L+ +P R+T + + HPW+ + K P PL
Sbjct: 247 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 291
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I+D + + LG G G ++ T+E A K + D RREV +
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRA 73
Query: 109 PKNSSIVSLKEACEDDNA----VHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTIV 162
+ IV + + E+ A + +VME +GGELF RI RG +TER A+ + ++I
Sbjct: 74 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 133
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
E +Q H + HRD+KPEN L+ +K+ N+ LK DFG + + +PYY+A
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 193
Query: 223 PEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAES----EQGVAQAILRGLIDFKRDPW 277
PEVL Y D+WS GVI+YILLCG PPF++ G+ I G +F W
Sbjct: 194 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 253
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
VSE K L+R +L+ +P R+T + + HPW+ + K P PL
Sbjct: 254 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 298
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I+D + + LG G G ++ T+E A K + D RREV +
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRA 65
Query: 109 PKNSSIVSLKEACEDDNA----VHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTIV 162
+ IV + + E+ A + +VME +GGELF RI RG +TER A+ + ++I
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
E +Q H + HRD+KPEN L+ +K+ N+ LK DFG + + +PYY+A
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 185
Query: 223 PEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAES----EQGVAQAILRGLIDFKRDPW 277
PEVL Y D+WS GVI+YILLCG PPF++ G+ I G +F W
Sbjct: 186 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 245
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
VSE K L+R +L+ +P R+T + + HPW+ + K P PL
Sbjct: 246 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 290
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL-----RTAVDIDDVRREVA 103
+ D Y++ + LG G G L +R T + +A + ISKRK R A +V E+
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE 163
I+K L + I+ +K + ++ ++V+EL EGGELFD++V E ++
Sbjct: 193 ILKKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAP 223
VQ H++G+IHRDLKPEN L ++++E+ +K DFG S + G+P Y+AP
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 310
Query: 224 EVL----KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQ-GVAQAILRGLIDFKRDPWP 278
EVL Y +D WS GVIL+I L G PPF Q + I G +F + W
Sbjct: 311 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 370
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
VSE A LV+++L DPK R T ++ L HPWLQ+
Sbjct: 371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 154/273 (56%), Gaps = 10/273 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
++ +ED Y + ELG G+F + C ++ T A K I KR+ R + V +++ REV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I++ + + ++++L + E+ V L++EL GGELFD + + +E A + + I+
Sbjct: 67 SILRQV-LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
+ V H + H DLKPEN + +K P +K IDFGL+ + G F I G+P ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q I DF + +
Sbjct: 186 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS 243
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
+ SE AK +R++L + + RLT ++ L HPW+
Sbjct: 244 HTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 154/273 (56%), Gaps = 10/273 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
++ +ED Y + ELG G+F + C ++ T A K I KR+ R + V +++ REV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I++ + + ++++L + E+ V L++EL GGELFD + + +E A + + I+
Sbjct: 67 SILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
+ V H + H DLKPEN + +K P +K IDFGL+ + G F I G+P ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q I DF + +
Sbjct: 186 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS 243
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
+ SE AK +R++L + + RLT ++ L HPW+
Sbjct: 244 HTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 154/273 (56%), Gaps = 10/273 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
++ +ED Y + ELG G+F + C ++ T A K I KR+ R + V +++ REV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I++ + + ++++L + E+ V L++EL GGELFD + + +E A + + I+
Sbjct: 67 SILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
+ V H + H DLKPEN + +K P +K IDFGL+ + G F I G+P ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q I DF + +
Sbjct: 186 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS 243
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
+ SE AK +R++L + + RLT ++ L HPW+
Sbjct: 244 HTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 149/281 (53%), Gaps = 19/281 (6%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D Y+V +G G + C+ + T A K I K K D E+ I+ +
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQ 79
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +I++LK+ +D V+LV EL GGEL D+I+ + ++ER A+ V TI + V+ H
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 171 HGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYY----MAPEV 225
GV+HRDLKP N L+ ++ N L+ DFG F K + ++ +P Y +APEV
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFG---FAKQLRAENGLLMTPCYTANFVAPEV 196
Query: 226 LKRN-YGPEIDIWSAGVILYILLCGVPPFW---AESEQGVAQAILRGLIDFKRDPWPNVS 281
LKR Y DIWS G++LY +L G PF +++ + + I G W VS
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVS 256
Query: 282 ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
E+AK LV +ML DP RLTAKQVL+HPW+ K P L
Sbjct: 257 ETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQL 297
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 153/273 (56%), Gaps = 10/273 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
++ +ED Y + ELG G+F + C ++ T A K I KR+ R + V +++ REV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I++ + + ++++L + E+ V L++EL GGELFD + + +E A + + I+
Sbjct: 67 SILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
+ V H + H DLKPEN + +K P +K IDFGL+ + G F I G+P ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q I DF + +
Sbjct: 186 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
SE AK +R++L + + RLT ++ L HPW+
Sbjct: 244 QTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 153/273 (56%), Gaps = 10/273 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
++ +ED Y + ELG G+F + C ++ T A K I KR+ R + V +++ REV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I++ + + ++++L + E+ V L++EL GGELFD + + +E A + + I+
Sbjct: 67 SILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
+ V H + H DLKPEN + +K P +K IDFGL+ + G F I G+P ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q I DF + +
Sbjct: 186 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
SE AK +R++L + + RLT ++ L HPW+
Sbjct: 244 QTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 149/281 (53%), Gaps = 19/281 (6%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D Y+V +G G + C+ + T A K I K K D E+ I+ +
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQ 79
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +I++LK+ +D V+LV EL GGEL D+I+ + ++ER A+ V TI + V+ H
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 171 HGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYY----MAPEV 225
GV+HRDLKP N L+ ++ N L+ DFG F K + ++ +P Y +APEV
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFG---FAKQLRAENGLLMTPCYTANFVAPEV 196
Query: 226 LKRN-YGPEIDIWSAGVILYILLCGVPPFW---AESEQGVAQAILRGLIDFKRDPWPNVS 281
LKR Y DIWS G++LY +L G PF +++ + + I G W VS
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVS 256
Query: 282 ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
E+AK LV +ML DP RLTAKQVL+HPW+ K P L
Sbjct: 257 ETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQL 297
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 153/273 (56%), Gaps = 10/273 (3%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA---VDIDDVRREV 102
++ +ED Y + ELG G+F + C ++ T A K I KR+ R + V +++ REV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREV 66
Query: 103 AIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
+I++ + + +I++L + E+ V L++EL GGELFD + + +E A + + I+
Sbjct: 67 SILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSP-LKAIDFGLSIFFKPGERFSEIVGSPYYM 221
+ V H + H DLKPEN + +K P +K IDFGL+ + G F I G+P ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 222 APEVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
APE++ NY P E D+WS GVI YILL G PF +++Q I DF + +
Sbjct: 186 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
SE AK +R++L + + RLT ++ L HPW+
Sbjct: 244 QTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 146/268 (54%), Gaps = 16/268 (5%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSI--SKRKLRTAVDIDDVR----REVAIMKHLPKNS 112
LGRG V CI + T + A K I + +A ++ ++R +EV I++ + +
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+I+ LK+ E + LV +L + GELFD + + +E+ + R ++EV+ HK
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK----- 227
++HRDLKPEN L ++ +K DFG S PGE+ E+ G+P Y+APE+++
Sbjct: 145 IVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 201
Query: 228 --RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
YG E+D+WS GVI+Y LL G PPFW + + + I+ G F W + S++ K
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
LV + L P+ R TA++ L HP+ Q
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 147/268 (54%), Gaps = 16/268 (5%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSI--SKRKLRTAVDIDDVR----REVAIMKHLPKNS 112
LGRG V CI + T + A K I + +A ++ ++R +EV I++ + +
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+I+ LK+ E + LV +L + GELFD + + +E+ + R ++EV+ HK
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 131
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRN--- 229
++HRDLKPEN L ++ +K DFG S PGE+ E+ G+P Y+APE+++ +
Sbjct: 132 IVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 188
Query: 230 ----YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
YG E+D+WS GVI+Y LL G PPFW + + + I+ G F W + S++ K
Sbjct: 189 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 248
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
LV + L P+ R TA++ L HP+ Q
Sbjct: 249 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 145/268 (54%), Gaps = 16/268 (5%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSI--SKRKLRTAVDIDDVR----REVAIMKHLPKNS 112
LGRG V CI + T + A K I + +A ++ ++R +EV I++ + +
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+I+ LK+ E + LV +L + GELFD + + +E+ + R ++EV+ HK
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK----- 227
++HRDLKPEN L ++ +K DFG S PGE+ + G+P Y+APE+++
Sbjct: 145 IVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMND 201
Query: 228 --RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
YG E+D+WS GVI+Y LL G PPFW + + + I+ G F W + S++ K
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
LV + L P+ R TA++ L HP+ Q
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 140/285 (49%), Gaps = 19/285 (6%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I+D + + LG G G ++ T+E A K + D RREV +
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQ--------DCPKARREVELHWRA 111
Query: 109 PKNSSIVSLKEACEDDNA----VHLVMELCEGGELFDRIVARGH--YTERAAAAVTRTIV 162
+ IV + + E+ A + +V E +GGELF RI RG +TER A+ + ++I
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIG 171
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
E +Q H + HRD+KPEN L+ +K+ N+ LK DFG + + +PYY+A
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 223 PEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAES----EQGVAQAILRGLIDFKRDPW 277
PEVL Y D WS GVI YILLCG PPF++ G I G +F W
Sbjct: 232 PEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEW 291
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
VSE K L+R +L+ +P R T + HPW+ + K P PL
Sbjct: 292 SEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPL 336
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 150/281 (53%), Gaps = 19/281 (6%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D Y V ++G G + V CI + T A K I K K D E+ I+ +
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEILLRYGQ 74
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +I++LK+ +D V++V EL +GGEL D+I+ + ++ER A+AV TI + V+ H
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 171 HGVIHRDLKPENFLFANKKEN-SPLKAIDFGLSIFFKPGERFSEIVGSPYY----MAPEV 225
GV+HRDLKP N L+ ++ N ++ DFG F K + ++ +P Y +APEV
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFG---FAKQLRAENGLLMTPCYTANFVAPEV 191
Query: 226 LKRN-YGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRGLIDFKRDPWPNVS 281
L+R Y DIWS GV+LY +L G PF ++ + + I G W +VS
Sbjct: 192 LERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVS 251
Query: 282 ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
++AK LV +ML DP RLTA VL HPW+ + + P L
Sbjct: 252 DTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQL 292
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 150/279 (53%), Gaps = 11/279 (3%)
Query: 36 QPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI 95
QP+ V G ++ D Y + ELG G FGV + C+++ T + K I+ +D
Sbjct: 40 QPVEVKQG----SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP---YPLDK 92
Query: 96 DDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH-YTERAA 154
V+ E++IM L + +++L +A ED + L++E GGELFDRI A + +E
Sbjct: 93 YTVKNEISIMNQL-HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV 151
Query: 155 AAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
R E ++ H+H ++H D+KPEN + KK +S +K IDFGL+ P E
Sbjct: 152 INYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASS-VKIIDFGLATKLNPDEIVKVT 210
Query: 215 VGSPYYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFK 273
+ + APE++ R G D+W+ GV+ Y+LL G+ PF E + Q + R +F
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 270
Query: 274 RDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
D + +VS AK ++ +L+ +P+ RLT LEHPWL+
Sbjct: 271 EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 112/165 (67%), Gaps = 2/165 (1%)
Query: 331 KQFSMMNRFKRKALRVIAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQL 390
KQFS N+FK+ ALRVIAE LS EE+ +KE F ID+D G ++ +ELKAGL+ G+ L
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 391 AESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNE 450
ESE+ L +A D + GT+DY EF+A LHL ++ ++HL AF+YFDKDG+GYI P+E
Sbjct: 61 KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Query: 451 LRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMMKTGT 495
L+ A E G +D ++ ++VD D DG I Y+EFVA + G+
Sbjct: 121 LQQACEEFGVEDVR--IEELXRDVDQDNDGRIDYNEFVAXXQKGS 163
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 148/259 (57%), Gaps = 7/259 (2%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG + C + T LA K I R ++ D ++V+ E+++M L +++++ L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMK---DKEEVKNEISVMNQL-DHANLIQLY 152
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGH-YTERAAAAVTRTIVEVVQLCHKHGVIHRD 177
+A E N + LVME +GGELFDRI+ + TE + I E ++ H+ ++H D
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 178 LKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNY-GPEIDI 236
LKPEN L N+ + +K IDFGL+ +KP E+ G+P ++APEV+ ++ D+
Sbjct: 213 LKPENILCVNR-DAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDM 271
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
WS GVI Y+LL G+ PF +++ IL D + + + ++SE AK + ++L +
Sbjct: 272 WSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEK 331
Query: 297 KLRLTAKQVLEHPWLQNAK 315
R++A + L+HPWL + K
Sbjct: 332 SWRISASEALKHPWLSDHK 350
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 148/281 (52%), Gaps = 19/281 (6%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D Y V ++G G + V CI + T A K I K K D E+ I+ +
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK-------RDPTEEIEILLRYGQ 74
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +I++LK+ +D V++V EL +GGEL D+I+ + ++ER A+AV TI + V+ H
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 171 HGVIHRDLKPENFLFANKKEN-SPLKAIDFGLSIFFKPGERFSEIVGSPYY----MAPEV 225
GV+HRDLKP N L+ ++ N ++ DFG F K + ++ +P Y +APEV
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFG---FAKQLRAENGLLXTPCYTANFVAPEV 191
Query: 226 LKRN-YGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRGLIDFKRDPWPNVS 281
L+R Y DIWS GV+LY L G PF ++ + + I G W +VS
Sbjct: 192 LERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVS 251
Query: 282 ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
++AK LV + L DP RLTA VL HPW+ + + P L
Sbjct: 252 DTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQYQL 292
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 142/270 (52%), Gaps = 14/270 (5%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + +G G F L T E++A K + K L + D+ ++ E+ +K+L ++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNL-RHQ 68
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
I L E N + +V+E C GGELFD I+++ +E V R IV V H G
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG 128
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF--SEIVGSPYYMAPEVL--KR 228
HRDLKPEN LF E LK IDFGL K + + GS Y APE++ K
Sbjct: 129 YAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKS 185
Query: 229 NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLV 288
G E D+WS G++LY+L+CG PF ++ + + I+RG D + W +S S+ L+
Sbjct: 186 YLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK--W--LSPSSILLL 241
Query: 289 RQMLEPDPKLRLTAKQVLEHPWLQNAKKAP 318
+QML+ DPK R++ K +L HPW+ P
Sbjct: 242 QQMLQVDPKKRISMKNLLNHPWIMQDYNYP 271
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 142/263 (53%), Gaps = 10/263 (3%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y++ LG G FG + T +A K ++++K+R+ + +RRE+ +K L ++
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK-LFRHP 76
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
I+ L + + + +VME GGELFD I G E+ + + + I+ V CH+H
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNY- 230
V+HRDLKPEN L + N+ K DFGLS GE GSP Y APEV+ R Y
Sbjct: 137 VVHRDLKPENVLL-DAHMNA--KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
GPE+DIWS+GVILY LLCG PF + + + I G+ F + N S SL++
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI--FYTPQYLN--PSVISLLKH 249
Query: 291 MLEPDPKLRLTAKQVLEHPWLQN 313
ML+ DP R T K + EH W +
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQ 272
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 148/265 (55%), Gaps = 8/265 (3%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
++Y++ +LGRGEFG+ + C++ +++ K + + D V++E++I+ ++ +
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISIL-NIAR 59
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCH 169
+ +I+ L E+ E + ++ E G ++F+RI + ER + + E +Q H
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 170 KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRN 229
H + H D++PEN ++ ++ +S +K I+FG + KPG+ F + +P Y APEV + +
Sbjct: 120 SHNIGHFDIRPENIIYQTRR-SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHD 178
Query: 230 Y-GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLV 288
D+WS G ++Y+LL G+ PF AE+ Q + + I+ F + + +S A V
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFV 238
Query: 289 RQMLEPDPKLRLTAKQVLEHPWLQN 313
++L + K R+TA + L+HPWL+
Sbjct: 239 DRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 141/272 (51%), Gaps = 11/272 (4%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
+ +++ D Y + ELG G FGV + +R T A K + D + VR+E+
Sbjct: 44 IKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQ 100
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIV-ARGHYTERAAAAVTRTIV 162
M L ++ ++V+L +A EDDN + ++ E GGELF+++ +E A R +
Sbjct: 101 TMSVL-RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC 159
Query: 163 EVVQLCHKH--GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
+ LCH H +H DLKPEN +F K+ N LK IDFGL+ P + G+ +
Sbjct: 160 K--GLCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEF 216
Query: 221 MAPEVLK-RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN 279
APEV + + G D+WS GV+ YILL G+ PF E++ + + + +
Sbjct: 217 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG 276
Query: 280 VSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
+SE K +R++L DP R+T Q LEHPWL
Sbjct: 277 ISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 136/284 (47%), Gaps = 38/284 (13%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I+D + + LG G G ++ T+E A K + D RREV +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWRA 67
Query: 109 PKNSSIVSLKEACEDDNA----VHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTIV 162
+ IV + + E+ A + +VME +GGELF RI RG +TER A+ + ++I
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
E +Q H + HRD+KPEN L+ +K+ N+ LK DFG A
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF--------------------A 167
Query: 223 PEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAES----EQGVAQAILRGLIDFKRDPWP 278
E Y D+WS GVI+YILLCG PPF++ G+ I G +F W
Sbjct: 168 KETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 227
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
VSE K L+R +L+ +P R+T + + HPW+ + K P PL
Sbjct: 228 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 271
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 146/261 (55%), Gaps = 11/261 (4%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + + +G+G F L T + +A + I K +L ++ + + REV IMK L +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSS-SLQKLFREVRIMKVL-NHP 73
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+IV L E E + ++LVME GGE+FD +VA G E+ A A R IV VQ CH+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNY 230
++HRDLK EN L + +K DFG S F G + E GSP Y APE+ K+
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYD 190
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
GPE+D+WS GVILY L+ G PF ++ + + + +LRG R P+ +S ++L+++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKK 246
Query: 291 MLEPDPKLRLTAKQVLEHPWL 311
L +P R T +Q+++ W+
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 141/272 (51%), Gaps = 11/272 (4%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
+ +++ D Y + ELG G FGV + +R T A K + D + VR+E+
Sbjct: 150 IKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQ 206
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIV-ARGHYTERAAAAVTRTIV 162
M L ++ ++V+L +A EDDN + ++ E GGELF+++ +E A R +
Sbjct: 207 TMSVL-RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC 265
Query: 163 EVVQLCHKH--GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
+ LCH H +H DLKPEN +F K+ N LK IDFGL+ P + G+ +
Sbjct: 266 K--GLCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEF 322
Query: 221 MAPEVLK-RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN 279
APEV + + G D+WS GV+ YILL G+ PF E++ + + + +
Sbjct: 323 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG 382
Query: 280 VSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
+SE K +R++L DP R+T Q LEHPWL
Sbjct: 383 ISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 138/264 (52%), Gaps = 10/264 (3%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
Y++ LG G FG + + T +A K ++++K+R+ + ++RE+ +K L ++
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRH 70
Query: 112 SSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
I+ L + +VME GGELFD I G E A + + I+ V CH+H
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNY 230
V+HRDLKPEN L + N+ K DFGLS GE + GSP Y APEV+ R Y
Sbjct: 131 MVVHRDLKPENVLL-DAHMNA--KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLY 187
Query: 231 -GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
GPE+DIWS GVILY LLCG PF E + + I G+ ++ S +L+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLM 243
Query: 290 QMLEPDPKLRLTAKQVLEHPWLQN 313
ML+ DP R T K + EH W +
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 137/264 (51%), Gaps = 10/264 (3%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
Y++ LG G FG + + T +A K ++++K+R+ + ++RE+ +K L ++
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRH 70
Query: 112 SSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
I+ L + +VME GGELFD I G E A + + I+ V CH+H
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNY 230
V+HRDLKPEN L + N+ K DFGLS GE GSP Y APEV+ R Y
Sbjct: 131 MVVHRDLKPENVLL-DAHMNA--KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 187
Query: 231 -GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
GPE+DIWS GVILY LLCG PF E + + I G+ ++ S +L+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLM 243
Query: 290 QMLEPDPKLRLTAKQVLEHPWLQN 313
ML+ DP R T K + EH W +
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 145/261 (55%), Gaps = 11/261 (4%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + + +G+G F L T + +A K I K +L ++ + + REV IMK L +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIMKVL-NHP 73
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+IV L E E + ++LVME GGE+FD +VA G E+ A A R IV VQ CH+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNY 230
++HRDLK EN L + +K DFG S F G + GSP Y APE+ K+
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
GPE+D+WS GVILY L+ G PF ++ + + + +LRG R P+ +S ++L+++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKK 246
Query: 291 MLEPDPKLRLTAKQVLEHPWL 311
L +P R T +Q+++ W+
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 145/261 (55%), Gaps = 11/261 (4%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + + +G+G F L T + +A K I K +L ++ + + REV IMK L +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIMKVL-NHP 73
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+IV L E E + ++LVME GGE+FD +VA G E+ A A R IV VQ CH+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNY 230
++HRDLK EN L + +K DFG S F G + GSP Y APE+ K+
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
GPE+D+WS GVILY L+ G PF ++ + + + +LRG R P+ +S ++L+++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKK 246
Query: 291 MLEPDPKLRLTAKQVLEHPWL 311
L +P R T +Q+++ W+
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 150/276 (54%), Gaps = 11/276 (3%)
Query: 39 TVLAGVPKENIE-DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDD 97
T LA +PK D + + R LG+G+FG YL ++ + ++A K + K +L
Sbjct: 2 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 61
Query: 98 VRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAV 157
+RRE+ I HL ++ +I+ + D ++L++E GEL+ + G + E+ +A
Sbjct: 62 LRREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 120
Query: 158 TRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGS 217
+ + + CH+ VIHRD+KPEN L K E LK DFG S+ P R + G+
Sbjct: 121 MEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGT 176
Query: 218 PYYMAPEVLK-RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDP 276
Y+ PE+++ + + ++D+W AGV+ Y L G+PPF + S + I+ +D K P
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFPP 234
Query: 277 WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
+ +S+ +K L+ ++L P RL K V+EHPW++
Sbjct: 235 F--LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 156/293 (53%), Gaps = 11/293 (3%)
Query: 39 TVLAGVPKENIE-DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDD 97
T LA +PK D + + R LG+G+FG YL ++ + ++A K + K +L
Sbjct: 1 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 98 VRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAV 157
+RRE+ I HL ++ +I+ + D ++L++E GEL+ + G + E+ +A
Sbjct: 61 LRREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 119
Query: 158 TRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGS 217
+ + + CH+ VIHRD+KPEN L K E LK DFG S+ P R + G+
Sbjct: 120 MEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGT 175
Query: 218 PYYMAPEVLK-RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDP 276
Y+ PE+++ + + ++D+W AGV+ Y L G+PPF + S + I+ +D K P
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFPP 233
Query: 277 WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVRSR 329
+ +S+ +K L+ ++L P RL K V+EHPW++ + P+ +S+
Sbjct: 234 F--LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQSK 284
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 150/276 (54%), Gaps = 11/276 (3%)
Query: 39 TVLAGVPKENIE-DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDD 97
T LA +PK D + + R LG+G+FG YL ++ + ++A K + K +L
Sbjct: 1 TALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 98 VRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAV 157
+RRE+ I HL ++ +I+ + D ++L++E GEL+ + G + E+ +A
Sbjct: 61 LRREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 119
Query: 158 TRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGS 217
+ + + CH+ VIHRD+KPEN L K E LK DFG S+ P R + G+
Sbjct: 120 MEELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGT 175
Query: 218 PYYMAPEVLK-RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDP 276
Y+ PE+++ + + ++D+W AGV+ Y L G+PPF + S + I+ +D K P
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFPP 233
Query: 277 WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
+ +S+ +K L+ ++L P RL K V+EHPW++
Sbjct: 234 F--LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 145/261 (55%), Gaps = 11/261 (4%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + + +G+G F L T + +A + I K +L ++ + + REV IMK L +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSS-SLQKLFREVRIMKVL-NHP 73
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+IV L E E + ++LVME GGE+FD +VA G E+ A A R IV VQ CH+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNY 230
++HRDLK EN L + +K DFG S F G + GSP Y APE+ K+
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
GPE+D+WS GVILY L+ G PF ++ + + + +LRG R P+ +S ++L+++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKK 246
Query: 291 MLEPDPKLRLTAKQVLEHPWL 311
L +P R T +Q+++ W+
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 145/261 (55%), Gaps = 11/261 (4%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + + +G+G F L T + +A K I K +L ++ + + REV IMK L +
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIMKVL-NHP 66
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+IV L E E + ++LVME GGE+FD +VA G E+ A A R IV VQ CH+
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNY 230
++HRDLK EN L + +K DFG S F G + GSP Y APE+ K+
Sbjct: 127 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 183
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
GPE+D+WS GVILY L+ G PF ++ + + + +LRG R P+ +S ++L+++
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKK 239
Query: 291 MLEPDPKLRLTAKQVLEHPWL 311
L +P R T +Q+++ W+
Sbjct: 240 FLILNPSKRGTLEQIMKDRWM 260
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 145/261 (55%), Gaps = 11/261 (4%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + + +G+G F L T + +A K I K +L ++ + + REV IMK L +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIMKVL-NHP 73
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+IV L E E + ++LVME GGE+FD +VA G E+ A A R IV VQ CH+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNY 230
++HRDLK EN L + +K DFG S F G + G+P Y APE+ K+
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
GPE+D+WS GVILY L+ G PF ++ + + + +LRG R P+ +S ++L+++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKK 246
Query: 291 MLEPDPKLRLTAKQVLEHPWL 311
L +P R T +Q+++ W+
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 146/267 (54%), Gaps = 12/267 (4%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ R LG+G+FG YL +R ++ +LA K + K +L A +RREV I HL ++ +I
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL-RHPNI 74
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ L D V+L++E G ++ + + E+ A + + CH VI
Sbjct: 75 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVI 134
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPE 233
HRD+KPEN L + N LK DFG S+ P R + + G+ Y+ PE+++ R + +
Sbjct: 135 HRDIKPENLLLGS---NGELKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLVRQML 292
+D+WS GV+ Y L G+PPF A + Q + I R ++F +P+ V+E A+ L+ ++L
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR--VEFT---FPDFVTEGARDLISRLL 245
Query: 293 EPDPKLRLTAKQVLEHPWLQNAKKAPN 319
+ + RLT +VLEHPW++ P+
Sbjct: 246 KHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 146/280 (52%), Gaps = 24/280 (8%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y++ LG G FG L T++ +A K IS++ L+ + V RE++ +K L ++
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHP 69
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
I+ L + + +V+E GGELFD IV + TE + I+ ++ CH+H
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNY 230
++HRDLKPEN L +N +K DFGLS G GSP Y APEV+ K
Sbjct: 129 IVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAI---LRGLIDFKRDPWPNVSESAKSL 287
GPE+D+WS G++LY++L G PF E + + + + + DF +S A+SL
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQSL 238
Query: 288 VRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVR 327
+R+M+ DP R+T +++ PW NV L D +R
Sbjct: 239 IRRMIVADPMQRITIQEIRRDPWF-------NVNLPDYLR 271
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 52/313 (16%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLR--TAVDIDDVRREVAIMK 106
++ +Y + +G+G +GV + I+ TR + A K ++K K+R D++ ++ EV +MK
Sbjct: 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRI--------------VARGHYT-- 150
L + +I L E ED+ + LVMELC GG L D++ V +
Sbjct: 84 KL-HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPC 142
Query: 151 ------------------------ERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFA 186
E+ + + R I + H G+ HRD+KPENFLF+
Sbjct: 143 PECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFS 202
Query: 187 NKKENSPLKAIDFGLSI-FFK--PGERF--SEIVGSPYYMAPEVLK---RNYGPEIDIWS 238
K + +K +DFGLS F+K GE + + G+PY++APEVL +YGP+ D WS
Sbjct: 203 TNK-SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261
Query: 239 AGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKL 298
AGV+L++LL G PF ++ +L + F+ + +S A+ L+ +L +
Sbjct: 262 AGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDE 321
Query: 299 RLTAKQVLEHPWL 311
R A + L+HPW+
Sbjct: 322 RFDAMRALQHPWI 334
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 145/267 (54%), Gaps = 12/267 (4%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ R LG+G+FG YL +R ++ +LA K + K +L A +RREV I HL ++ +I
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL-RHPNI 74
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ L D V+L++E G ++ + + E+ A + + CH VI
Sbjct: 75 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVI 134
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPE 233
HRD+KPEN L + N LK DFG S+ P R + G+ Y+ PE+++ R + +
Sbjct: 135 HRDIKPENLLLGS---NGELKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 190
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLVRQML 292
+D+WS GV+ Y L G+PPF A + Q + I R ++F +P+ V+E A+ L+ ++L
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR--VEFT---FPDFVTEGARDLISRLL 245
Query: 293 EPDPKLRLTAKQVLEHPWLQNAKKAPN 319
+ + RLT +VLEHPW++ P+
Sbjct: 246 KHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 142/261 (54%), Gaps = 11/261 (4%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + + +G+G F L T +A K I K +L + + REV IMK L +
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKIL-NHP 71
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+IV L E E + ++L+ME GGE+FD +VA G E+ A + R IV VQ CH+
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNY 230
++HRDLK EN L + +K DFG S F G + GSP Y APE+ K+
Sbjct: 132 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYD 188
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
GPE+D+WS GVILY L+ G PF ++ + + + +LRG R P+ +S ++L+++
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKR 244
Query: 291 MLEPDPKLRLTAKQVLEHPWL 311
L +P R T +Q+++ W+
Sbjct: 245 FLVLNPIKRGTLEQIMKDRWI 265
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 149/273 (54%), Gaps = 13/273 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 12 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E GE++ + + E+ A + + C
Sbjct: 71 -RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE+++
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 240
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ P+
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 150/277 (54%), Gaps = 12/277 (4%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P++ + + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I
Sbjct: 2 PRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEV 164
HL ++ +I+ L D V+L++E G ++ + + E+ A +
Sbjct: 62 QSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 165 VQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE 224
+ CH VIHRD+KPEN L + E LK DFG S+ P R +E+ G+ Y+ PE
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTELCGTLDYLPPE 176
Query: 225 VLK-RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSE 282
+++ R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTE 231
Query: 283 SAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPN 319
A+ L+ ++L+ +P R ++VLEHPW+ P+
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 148/273 (54%), Gaps = 13/273 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 12 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E GE++ + + E+ A + + C
Sbjct: 71 -RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S+ P R + G+ Y+ PE+++
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLXGTLDYLPPEMIEG 185
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 240
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ P+
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 142/261 (54%), Gaps = 11/261 (4%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + + +G+G F L T +A K I K +L + + REV IMK L +
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKIL-NHP 74
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+IV L E E + ++L+ME GGE+FD +VA G E+ A + R IV VQ CH+
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNY 230
++HRDLK EN L + +K DFG S F G + G+P Y APE+ K+
Sbjct: 135 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
GPE+D+WS GVILY L+ G PF ++ + + + +LRG R P+ +S ++L+++
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKR 247
Query: 291 MLEPDPKLRLTAKQVLEHPWL 311
L +P R T +Q+++ W+
Sbjct: 248 FLVLNPIKRGTLEQIMKDRWI 268
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 141/300 (47%), Gaps = 35/300 (11%)
Query: 49 IEDRYLVDREL-GRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
ED Y + EL G G + + + A K I K+ + V REV +
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSR---SRVFREVETLYQ 66
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
N +I+ L E EDD +LV E +GG + I + H+ ER A+ V R + +
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDF 126
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIV--------GSPY 219
H G+ HRDLKPEN L + ++ SP+K DF L K + I GS
Sbjct: 127 LHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 220 YMAPEVLK------RNYGPEIDIWSAGVILYILLCGVPPF---------WAESE------ 258
YMAPEV++ Y D+WS GV+LYI+L G PPF W E
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQ 246
Query: 259 QGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAP 318
+ ++I G +F W ++S AK L+ ++L D K RL+A QVL+HPW+Q +AP
Sbjct: 247 NKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG--QAP 304
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 145/267 (54%), Gaps = 12/267 (4%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ R LG+G+FG YL +++++ +LA K + K +L A +RREV I HL ++ +I
Sbjct: 12 IGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNI 70
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ L D V+L++E G ++ + + E+ A + + CH VI
Sbjct: 71 LRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVI 130
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPE 233
HRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE+++ R + +
Sbjct: 131 HRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLVRQML 292
+D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+ L+ ++L
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISR--VEFT---FPDFVTEGARDLISRLL 241
Query: 293 EPDPKLRLTAKQVLEHPWLQNAKKAPN 319
+ +P R ++VLEHPW+ P+
Sbjct: 242 KHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 149/277 (53%), Gaps = 12/277 (4%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P++ + + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I
Sbjct: 2 PRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEV 164
HL ++ +I+ L D V+L++E G ++ + + E+ A +
Sbjct: 62 QSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 165 VQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE 224
+ CH VIHRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPE 176
Query: 225 VLK-RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSE 282
+++ R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTE 231
Query: 283 SAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPN 319
A+ L+ ++L+ +P R ++VLEHPW+ P+
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 149/273 (54%), Gaps = 13/273 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 12 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E G ++ + + E+ A + + C
Sbjct: 71 -RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S+ P R +++ G+ Y+ PE+++
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEG 185
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 240
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ P+
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 149/273 (54%), Gaps = 13/273 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 8 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E G ++ + + E+ A + + C
Sbjct: 67 -RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S+ P R +++ G+ Y+ PE+++
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEG 181
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 236
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ P+
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 150/274 (54%), Gaps = 14/274 (5%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 24 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E G ++ + + E+ A + + C
Sbjct: 83 -RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 141
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE+++
Sbjct: 142 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEG 197
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 198 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 252
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQ-NAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ N+ K N
Sbjct: 253 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 286
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 149/273 (54%), Gaps = 13/273 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 7 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E G ++ + + E+ A + + C
Sbjct: 66 -RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S+ P R +++ G+ Y+ PE+++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 235
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ P+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 145/267 (54%), Gaps = 12/267 (4%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL ++ +I
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNI 70
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ L D V+L++E G ++ + + E+ A + + CH VI
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI 130
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPE 233
HRD+KPEN L + E LK DFG S+ P R +++ G+ Y+ PE+++ R + +
Sbjct: 131 HRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLVRQML 292
+D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+ L+ ++L
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARDLISRLL 241
Query: 293 EPDPKLRLTAKQVLEHPWLQNAKKAPN 319
+ +P R ++VLEHPW+ P+
Sbjct: 242 KHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 148/273 (54%), Gaps = 13/273 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 12 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E G ++ + + E+ A + + C
Sbjct: 71 -RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE+++
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 240
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ P+
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 148/273 (54%), Gaps = 13/273 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 10 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E G ++ + + E+ A + + C
Sbjct: 69 -RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE+++
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 238
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ P+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 150/274 (54%), Gaps = 14/274 (5%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 33 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E G ++ + + E+ A + + C
Sbjct: 92 -RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S+ P R ++ G+ Y+ PE+++
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEG 206
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 261
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQ-NAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ N+ K N
Sbjct: 262 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 295
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 150/274 (54%), Gaps = 14/274 (5%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 33 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E G ++ + + E+ A + + C
Sbjct: 92 -RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE+++
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEG 206
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 261
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQ-NAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ N+ K N
Sbjct: 262 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 295
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 145/275 (52%), Gaps = 16/275 (5%)
Query: 45 PKENIED-----RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR 99
PK ++ D Y + + LG G FG L T + +A K I+K+ L + +
Sbjct: 2 PKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE 61
Query: 100 REVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTR 159
RE++ ++ L ++ I+ L + + + + +V+E G ELFD IV R +E+ A +
Sbjct: 62 REISYLR-LLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQ 119
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY 219
I+ V+ CH+H ++HRDLKPEN L E+ +K DFGLS G GSP
Sbjct: 120 QIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPN 176
Query: 220 YMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y APEV+ K GPE+D+WS GVILY++LC PF ES + + I G+ +
Sbjct: 177 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK--- 233
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
+S A L+++ML +P R++ ++++ W +
Sbjct: 234 -FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 144/267 (53%), Gaps = 12/267 (4%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL ++ +I
Sbjct: 16 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNI 74
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ L D V+L++E G ++ + + E+ A + + CH VI
Sbjct: 75 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI 134
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPE 233
HRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE+++ R + +
Sbjct: 135 HRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLVRQML 292
+D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+ L+ ++L
Sbjct: 191 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARDLISRLL 245
Query: 293 EPDPKLRLTAKQVLEHPWLQNAKKAPN 319
+ +P R ++VLEHPW+ P+
Sbjct: 246 KHNPSQRPMLREVLEHPWITANSSKPS 272
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 145/275 (52%), Gaps = 16/275 (5%)
Query: 45 PKENIED-----RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR 99
PK ++ D Y + + LG G FG L T + +A K I+K+ L + +
Sbjct: 3 PKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE 62
Query: 100 REVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTR 159
RE++ ++ L ++ I+ L + + + + +V+E G ELFD IV R +E+ A +
Sbjct: 63 REISYLR-LLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQ 120
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY 219
I+ V+ CH+H ++HRDLKPEN L E+ +K DFGLS G GSP
Sbjct: 121 QIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPN 177
Query: 220 YMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y APEV+ K GPE+D+WS GVILY++LC PF ES + + I G+ +
Sbjct: 178 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK--- 234
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
+S A L+++ML +P R++ ++++ W +
Sbjct: 235 -FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 149/274 (54%), Gaps = 14/274 (5%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 12 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E G ++ + + E+ A + + C
Sbjct: 71 -RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE ++
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEXIEG 185
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 240
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQ-NAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ N+ K N
Sbjct: 241 LISRLLKHNPSQRPXLREVLEHPWITANSSKPSN 274
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 148/273 (54%), Gaps = 13/273 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 10 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E G ++ + + E+ A + + C
Sbjct: 69 -RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE+++
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEG 183
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 238
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ P+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 144/267 (53%), Gaps = 12/267 (4%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL ++ +I
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNI 70
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ L D V+L++E G ++ + + E+ A + + CH VI
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI 130
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPE 233
HRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE+++ R + +
Sbjct: 131 HRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTXLCGTLDYLPPEMIEGRMHDEK 186
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLVRQML 292
+D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+ L+ ++L
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARDLISRLL 241
Query: 293 EPDPKLRLTAKQVLEHPWLQNAKKAPN 319
+ +P R ++VLEHPW+ P+
Sbjct: 242 KHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 144/267 (53%), Gaps = 12/267 (4%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL ++ +I
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNI 73
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ L D V+L++E G ++ + + E+ A + + CH VI
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI 133
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPE 233
HRD+KPEN L + E LK DFG S+ P R ++ G+ Y+ PE+++ R + +
Sbjct: 134 HRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 189
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLVRQML 292
+D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+ L+ ++L
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARDLISRLL 244
Query: 293 EPDPKLRLTAKQVLEHPWLQNAKKAPN 319
+ +P R ++VLEHPW+ P+
Sbjct: 245 KHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 144/267 (53%), Gaps = 12/267 (4%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL ++ +I
Sbjct: 11 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNI 69
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ L D V+L++E G ++ + + E+ A + + CH VI
Sbjct: 70 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI 129
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPE 233
HRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE+++ R + +
Sbjct: 130 HRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 185
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLVRQML 292
+D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+ L+ ++L
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARDLISRLL 240
Query: 293 EPDPKLRLTAKQVLEHPWLQNAKKAPN 319
+ +P R ++VLEHPW+ P+
Sbjct: 241 KHNPSQRPMLREVLEHPWITANSSKPS 267
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 144/267 (53%), Gaps = 12/267 (4%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL ++ +I
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNI 70
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ L D V+L++E G ++ + + E+ A + + CH VI
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI 130
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPE 233
HRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE+++ R + +
Sbjct: 131 HRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLVRQML 292
+D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+ L+ ++L
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARDLISRLL 241
Query: 293 EPDPKLRLTAKQVLEHPWLQNAKKAPN 319
+ +P R ++VLEHPW+ P+
Sbjct: 242 KHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 143/261 (54%), Gaps = 11/261 (4%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + + +G+G F L T +A K I K +L + + REV IMK L +
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL-NPTSLQKLFREVRIMKIL-NHP 74
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+IV L E E + ++LVME GGE+FD +VA G E+ A A R IV VQ CH+
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY 134
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNY 230
++HRDLK EN L + +K DFG S F G + GSP Y APE+ K+
Sbjct: 135 IVHRDLKAENLLLDG---DMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYD 191
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
GPE+D+WS GVILY L+ G PF ++ + + + +LRG R P+ +S ++L+++
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKK 247
Query: 291 MLEPDPKLRLTAKQVLEHPWL 311
+L +P R + +Q+++ W+
Sbjct: 248 LLVLNPIKRGSLEQIMKDRWM 268
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 147/273 (53%), Gaps = 13/273 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 9 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E G ++ + + E+ A + + C
Sbjct: 68 -RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S+ P R + G+ Y+ PE+++
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEG 182
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 237
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ P+
Sbjct: 238 LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 147/273 (53%), Gaps = 13/273 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 8 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E G ++ + + E+ A + + C
Sbjct: 67 -RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S+ P R + G+ Y+ PE+++
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEG 181
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 236
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ P+
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 143/272 (52%), Gaps = 9/272 (3%)
Query: 47 ENIEDRY-LVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIM 105
EN + Y L +ELGRG+F V CI + T + A K + KR+ R ++ E+A++
Sbjct: 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR-RGQDCRAEILHEIAVL 82
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIVE 163
+ +++L E E+ + + L++E GGE+F + +E + + I+E
Sbjct: 83 ELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILE 142
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAP 223
V H++ ++H DLKP+N L ++ +K +DFG+S EI+G+P Y+AP
Sbjct: 143 GVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAP 202
Query: 224 EVLKRNYGP---EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV 280
E+L NY P D+W+ G+I Y+LL PF E Q I + +D+ + + +V
Sbjct: 203 EIL--NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSV 260
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
S+ A ++ +L +P+ R TA+ L H WLQ
Sbjct: 261 SQLATDFIQSLLVKNPEKRPTAEICLSHSWLQ 292
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 140/260 (53%), Gaps = 11/260 (4%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + + +G+G F L T + +A K I K +L ++ + + REV I K L +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIXKVL-NHP 73
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+IV L E E + ++LV E GGE+FD +VA G E+ A A R IV VQ CH+
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNY 230
++HRDLK EN L + +K DFG S F G + G+P Y APE+ K+
Sbjct: 134 IVHRDLKAENLLL---DADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
GPE+D+WS GVILY L+ G PF ++ + + + +LRG R P+ S ++L+++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YXSTDCENLLKK 246
Query: 291 MLEPDPKLRLTAKQVLEHPW 310
L +P R T +Q+ + W
Sbjct: 247 FLILNPSKRGTLEQIXKDRW 266
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 143/267 (53%), Gaps = 12/267 (4%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL ++ +I
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNI 70
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ L D V+L++E G ++ + + E+ A + + CH VI
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI 130
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPE 233
HRD+KPEN L + E LK DFG S+ P R + G+ Y+ PE+++ R + +
Sbjct: 131 HRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 186
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLVRQML 292
+D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+ L+ ++L
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARDLISRLL 241
Query: 293 EPDPKLRLTAKQVLEHPWLQNAKKAPN 319
+ +P R ++VLEHPW+ P+
Sbjct: 242 KHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 142/259 (54%), Gaps = 12/259 (4%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL ++ +I
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNI 73
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ L D V+L++E G ++ + + E+ A + + CH VI
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI 133
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPE 233
HRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE+++ R + +
Sbjct: 134 HRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLVRQML 292
+D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+ L+ ++L
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARDLISRLL 244
Query: 293 EPDPKLRLTAKQVLEHPWL 311
+ +P R ++VLEHPW+
Sbjct: 245 KHNPSQRPMLREVLEHPWI 263
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 147/273 (53%), Gaps = 13/273 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 8 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E G ++ + + E+ A + + C
Sbjct: 67 -RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK DFG S P R + + G+ Y+ PE+++
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGE---LKIADFGWSC-HAPSSRRTTLSGTLDYLPPEMIEG 181
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 236
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ P+
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 140/262 (53%), Gaps = 11/262 (4%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + + LG G FG L T + +A K I+K+ L + + RE++ ++ L ++
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHP 68
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
I+ L + + + + +V+E G ELFD IV R +E+ A + I+ V+ CH+H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 127
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNY 230
++HRDLKPEN L E+ +K DFGLS G GSP Y APEV+ K
Sbjct: 128 IVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 184
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
GPE+D+WS GVILY++LC PF ES + + I G+ + +S A L+++
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 240
Query: 291 MLEPDPKLRLTAKQVLEHPWLQ 312
ML +P R++ ++++ W +
Sbjct: 241 MLIVNPLNRISIHEIMQDDWFK 262
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 150/274 (54%), Gaps = 14/274 (5%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ED + + R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL
Sbjct: 9 LED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
++ +I+ L D V+L++E G ++ + + E+ A + + C
Sbjct: 68 -RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK- 227
H VIHRD+KPEN L + E LK +FG S+ P R + + G+ Y+ PE+++
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEG 182
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKS 286
R + ++D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARD 237
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQ-NAKKAPN 319
L+ ++L+ +P R ++VLEHPW+ N+ K N
Sbjct: 238 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 271
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 140/262 (53%), Gaps = 11/262 (4%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + + LG G FG L T + +A K I+K+ L + + RE++ ++ L ++
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHP 64
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
I+ L + + + + +V+E G ELFD IV R +E+ A + I+ V+ CH+H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNY 230
++HRDLKPEN L E+ +K DFGLS G GSP Y APEV+ K
Sbjct: 124 IVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
GPE+D+WS GVILY++LC PF ES + + I G+ + +S A L+++
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 236
Query: 291 MLEPDPKLRLTAKQVLEHPWLQ 312
ML +P R++ ++++ W +
Sbjct: 237 MLIVNPLNRISIHEIMQDDWFK 258
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 144/267 (53%), Gaps = 12/267 (4%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL ++ +I
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNI 73
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ L D V+L++E G ++ + + E+ A + + CH VI
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI 133
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPE 233
HRD+KPEN L + E LK +FG S+ P R + + G+ Y+ PE+++ R + +
Sbjct: 134 HRDIKPENLLLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLVRQML 292
+D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+ L+ ++L
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARDLISRLL 244
Query: 293 EPDPKLRLTAKQVLEHPWLQNAKKAPN 319
+ +P R ++VLEHPW+ P+
Sbjct: 245 KHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
AE LS EE+ +KE+FK ID+DN G ++ DELK GL+ GS+L ESE++ L++A D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 408 GTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVA 467
GT+DYGEF+A +HL ++ +E+L AFSYFDKDG+GYI +E++ A + G DD
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIH--I 118
Query: 468 NDIFQEVDTDKDGLISYDEFVAMMK 492
+D+ +E+D D DG I Y EF AMM+
Sbjct: 119 DDMIKEIDQDNDGQIDYGEFAAMMR 143
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 141/259 (54%), Gaps = 12/259 (4%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ R LG+G+FG YL ++ ++ +LA K + K +L A +RREV I HL ++ +I
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNI 73
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ L D V+L++E G ++ + + E+ A + + CH VI
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI 133
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPE 233
HRD+KPEN L + E LK DFG S+ P R + G+ Y+ PE+++ R + +
Sbjct: 134 HRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 189
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLVRQML 292
+D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+ L+ ++L
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARDLISRLL 244
Query: 293 EPDPKLRLTAKQVLEHPWL 311
+ +P R ++VLEHPW+
Sbjct: 245 KHNPSQRPMLREVLEHPWI 263
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 141/259 (54%), Gaps = 12/259 (4%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ R LG+G+FG YL ++ + +LA K + K +L A +RREV I HL ++ +I
Sbjct: 9 IGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNI 67
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ L D V+L++E G ++ + + E+ A + + CH VI
Sbjct: 68 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI 127
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPE 233
HRD+KPEN L + E LK DFG S+ P R + + G+ Y+ PE+++ R + +
Sbjct: 128 HRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 183
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLVRQML 292
+D+WS GV+ Y L G PPF A + Q + I R ++F +P+ V+E A+ L+ ++L
Sbjct: 184 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFT---FPDFVTEGARDLISRLL 238
Query: 293 EPDPKLRLTAKQVLEHPWL 311
+ +P R ++VLEHPW+
Sbjct: 239 KHNPSQRPMLREVLEHPWI 257
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 148/311 (47%), Gaps = 37/311 (11%)
Query: 49 IEDRYLVDRE-LGRGEFGVTYLCIDRDTRELLACKSISKR--KLRTAVDIDDVRREVAIM 105
ED Y + + LG G CI+ T + A K I K+ +R+ V REV ++
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV-----FREVEML 64
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+ +++ L E E+++ +LV E GG + I R H+ E A+ V + + +
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASAL 124
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI--------VGS 217
H G+ HRDLKPEN L + + SP+K DFGL K S I GS
Sbjct: 125 DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 218 PYYMAPEVLK------RNYGPEIDIWSAGVILYILLCGVPPF---------WAESEQGVA 262
YMAPEV++ Y D+WS GVILYILL G PPF W E A
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244
Query: 263 ------QAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
++I G +F W ++S +AK L+ ++L D K RL+A QVL+HPW+Q
Sbjct: 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP 304
Query: 317 APNVPLGDVVR 327
+P V++
Sbjct: 305 ENTLPTPMVLQ 315
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 141/274 (51%), Gaps = 12/274 (4%)
Query: 41 LAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR 100
LA E IED + V LG+G F Y T +A K I K+ + A + V+
Sbjct: 2 LATCIGEKIED-FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN 60
Query: 101 EVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH-YTERAAAAVTR 159
EV I L K+ SI+ L ED N V+LV+E+C GE+ + R ++E A
Sbjct: 61 EVKIHCQL-KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH 119
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK-PGERFSEIVGSP 218
I+ + H HG++HRDL N L N +K DFGL+ K P E+ + G+P
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNLLLT---RNMNIKIADFGLATQLKMPHEKHYTLCGTP 176
Query: 219 YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y++PE+ R+ +G E D+WS G + Y LL G PPF ++ + ++ L D++ +
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV--LADYEMPSF 234
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
+S AK L+ Q+L +P RL+ VL+HP++
Sbjct: 235 --LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 147/311 (47%), Gaps = 37/311 (11%)
Query: 49 IEDRYLVDRE-LGRGEFGVTYLCIDRDTRELLACKSISKR--KLRTAVDIDDVRREVAIM 105
ED Y + + LG G CI+ T + A K I K+ +R+ V REV ++
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV-----FREVEML 64
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+ +++ L E E+++ +LV E GG + I R H+ E A+ V + + +
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASAL 124
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI--------VGS 217
H G+ HRDLKPEN L + + SP+K DF L K S I GS
Sbjct: 125 DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 218 PYYMAPEVLK------RNYGPEIDIWSAGVILYILLCGVPPF---------WAESEQGVA 262
YMAPEV++ Y D+WS GVILYILL G PPF W E A
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244
Query: 263 ------QAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
++I G +F W ++S +AK L+ ++L D K RL+A QVL+HPW+Q
Sbjct: 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP 304
Query: 317 APNVPLGDVVR 327
+P V++
Sbjct: 305 ENTLPTPMVLQ 315
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 140/273 (51%), Gaps = 12/273 (4%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY+ R LG+G F Y D DT+E+ A K + K L + + E+AI K L N
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-DN 85
Query: 112 SSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
+V EDD+ V++V+E+C L + R TE A R ++ VQ H +
Sbjct: 86 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 145
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPGERFSEIVGSPYYMAPEVL-KR 228
VIHRDLK N LF N ++ +K DFGL+ I F GER ++ G+P Y+APEVL K+
Sbjct: 146 RVIHRDLKLGN-LFLN--DDMDVKIGDFGLATKIEFD-GERKKDLCGTPNYIAPEVLCKK 201
Query: 229 NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLV 288
+ E+DIWS G ILY LL G PPF + I + R +++ A +L+
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALI 257
Query: 289 RQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVP 321
R+ML DP LR + ++L + + +P
Sbjct: 258 RRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 290
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 140/273 (51%), Gaps = 12/273 (4%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY+ R LG+G F Y D DT+E+ A K + K L + + E+AI K L N
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-DN 101
Query: 112 SSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
+V EDD+ V++V+E+C L + R TE A R ++ VQ H +
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 161
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPGERFSEIVGSPYYMAPEVL-KR 228
VIHRDLK N LF N ++ +K DFGL+ I F GER ++ G+P Y+APEVL K+
Sbjct: 162 RVIHRDLKLGN-LFLN--DDMDVKIGDFGLATKIEFD-GERKKDLCGTPNYIAPEVLCKK 217
Query: 229 NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLV 288
+ E+DIWS G ILY LL G PPF + I + R +++ A +L+
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALI 273
Query: 289 RQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVP 321
R+ML DP LR + ++L + + +P
Sbjct: 274 RRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 139/273 (50%), Gaps = 12/273 (4%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY+ R LG+G F Y D DT+E+ A K + K L + + E+AI K L N
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-DN 101
Query: 112 SSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
+V EDD+ V++V+E+C L + R TE A R ++ VQ H +
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 161
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPGERFSEIVGSPYYMAPEVL-KR 228
VIHRDLK N LF N ++ +K DFGL+ I F GER + G+P Y+APEVL K+
Sbjct: 162 RVIHRDLKLGN-LFLN--DDMDVKIGDFGLATKIEFD-GERKKTLCGTPNYIAPEVLCKK 217
Query: 229 NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLV 288
+ E+DIWS G ILY LL G PPF + I + R +++ A +L+
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALI 273
Query: 289 RQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVP 321
R+ML DP LR + ++L + + +P
Sbjct: 274 RRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 139/273 (50%), Gaps = 12/273 (4%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY+ R LG+G F Y D DT+E+ A K + K L + + E+AI K L N
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL-DN 101
Query: 112 SSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
+V EDD+ V++V+E+C L + R TE A R ++ VQ H +
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 161
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPGERFSEIVGSPYYMAPEVL-KR 228
VIHRDLK N LF N ++ +K DFGL+ I F GER + G+P Y+APEVL K+
Sbjct: 162 RVIHRDLKLGN-LFLN--DDMDVKIGDFGLATKIEFD-GERKKXLCGTPNYIAPEVLCKK 217
Query: 229 NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLV 288
+ E+DIWS G ILY LL G PPF + I + R +++ A +L+
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALI 273
Query: 289 RQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVP 321
R+ML DP LR + ++L + + +P
Sbjct: 274 RRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 144/277 (51%), Gaps = 16/277 (5%)
Query: 42 AGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRRE 101
A +P + DRY + +++G G FGV L D+ + EL+A K I + + +D ++V+RE
Sbjct: 9 ADLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE---KID-ENVKRE 64
Query: 102 VAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTI 161
+ + L ++ +IV KE + +VME GGELF+RI G ++E A + +
Sbjct: 65 IINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 123
Query: 162 VEVVQLCHKHGVIHRDLKPENFLFANKKENSP---LKAIDFGLSIFFKPGERFSEIVGSP 218
+ V CH V HRDLK EN L + SP LK DFG S + VG+P
Sbjct: 124 ISGVSYCHAMQVCHRDLKLENTLL----DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP 179
Query: 219 YYMAPEV-LKRNY-GPEIDIWSAGVILYILLCGVPPFW-AESEQGVAQAILRGL-IDFKR 274
Y+APEV LK+ Y G D+WS GV LY++L G PF E + + I R L + +
Sbjct: 180 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI 239
Query: 275 DPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
+ ++S + L+ ++ DP R++ ++ H W
Sbjct: 240 PDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 141/275 (51%), Gaps = 16/275 (5%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
+P + DRY + +++G G FGV L D+ + EL+A K I + + A +V+RE+
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAA----NVKREII 67
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE 163
+ L ++ +IV KE + +VME GGELF+RI G ++E A + ++
Sbjct: 68 NHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSP---LKAIDFGLSIFFKPGERFSEIVGSPYY 220
V CH V HRDLK EN L + SP LK DFG S + VG+P Y
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLL----DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAY 182
Query: 221 MAPEV-LKRNY-GPEIDIWSAGVILYILLCGVPPFW-AESEQGVAQAILRGL-IDFKRDP 276
+APEV LK+ Y G D+WS GV LY++L G PF E + + I R L + +
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD 242
Query: 277 WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
+ ++S + L+ ++ DP R++ ++ H W
Sbjct: 243 YVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 143/275 (52%), Gaps = 16/275 (5%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
+P + DRY + +++G G FGV L D+ + EL+A K I + + +D ++V+RE+
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE---KID-ENVKREII 67
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE 163
+ L ++ +IV KE + +VME GGELF+RI G ++E A + ++
Sbjct: 68 NHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSP---LKAIDFGLSIFFKPGERFSEIVGSPYY 220
V CH V HRDLK EN L + SP LK FG S + + VG+P Y
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLL----DGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAY 182
Query: 221 MAPEV-LKRNY-GPEIDIWSAGVILYILLCGVPPFW-AESEQGVAQAILRGL-IDFKRDP 276
+APEV LK+ Y G D+WS GV LY++L G PF E + + I R L + +
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD 242
Query: 277 WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
+ ++S + L+ ++ DP R++ ++ H W
Sbjct: 243 YVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 142/275 (51%), Gaps = 16/275 (5%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
+P + DRY + +++G G FGV L D+ + EL+A K I + + +D ++V+RE+
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE---KID-ENVKREII 67
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE 163
+ L ++ +IV KE + +VME GGELF+RI G ++E A + ++
Sbjct: 68 NHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSP---LKAIDFGLSIFFKPGERFSEIVGSPYY 220
V CH V HRDLK EN L + SP LK FG S + VG+P Y
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLL----DGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAY 182
Query: 221 MAPEV-LKRNY-GPEIDIWSAGVILYILLCGVPPFW-AESEQGVAQAILRGL-IDFKRDP 276
+APEV LK+ Y G D+WS GV LY++L G PF E + + I R L + +
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD 242
Query: 277 WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
+ ++S + L+ ++ DP R++ ++ H W
Sbjct: 243 YVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 141/275 (51%), Gaps = 16/275 (5%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
+P + DRY + +++G G FGV L D+ EL+A K I + + +D ++V+RE+
Sbjct: 12 LPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE---KID-ENVKREII 67
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE 163
+ L ++ +IV KE + +VME GGELF+RI G ++E A + ++
Sbjct: 68 NHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSP---LKAIDFGLSIFFKPGERFSEIVGSPYY 220
V H V HRDLK EN L + SP LK DFG S + VG+P Y
Sbjct: 127 GVSYAHAMQVAHRDLKLENTLL----DGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAY 182
Query: 221 MAPEV-LKRNY-GPEIDIWSAGVILYILLCGVPPFW-AESEQGVAQAILRGL-IDFKRDP 276
+APEV LK+ Y G D+WS GV LY++L G PF E + + I R L + +
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD 242
Query: 277 WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
+ ++S + L+ ++ DP R++ ++ H W
Sbjct: 243 YVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 146/294 (49%), Gaps = 27/294 (9%)
Query: 59 LGRGEFGVTYLC---IDRDTRELLACKSISKRKL-RTAVDIDDVRREVAIMKHLPKNSSI 114
LG G +G +L DT +L A K + K + + A + R E +++H+ ++ +
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
V+L A + + +HL+++ GGELF + R +TE IV ++ HK G+I
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGII 181
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFF--KPGERFSEIVGSPYYMAPEVLK---RN 229
+RD+K EN L + N + DFGLS F ER + G+ YMAP++++
Sbjct: 182 YRDIKLENILLDS---NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSG 238
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSESAKSLV 288
+ +D WS GV++Y LL G PF + E+ I R ++ P+P +S AK L+
Sbjct: 239 HDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK-SEPPYPQEMSALAKDLI 297
Query: 289 RQMLEPDPKLRLT-----AKQVLEHPWLQN-------AKKAPNVPLGDVVRSRL 330
+++L DPK RL A ++ EH + Q AKK P P V+R L
Sbjct: 298 QRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVP-APFKPVIRDEL 350
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 18/276 (6%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
+P + DRY +++G G FGV L D+ T+EL+A K I + A+D ++V+RE+
Sbjct: 13 MPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG---AAID-ENVQREII 68
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE 163
+ L ++ +IV KE + ++ME GGEL++RI G ++E A + ++
Sbjct: 69 NHRSL-RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS 127
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSP---LKAIDFGLSIFFKPGERFSEIVGSPYY 220
V CH + HRDLK EN L + SP LK DFG S + VG+P Y
Sbjct: 128 GVSYCHSMQICHRDLKLENTLL----DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAY 183
Query: 221 MAPEVLKRNY--GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
+APEVL R G D+WS GV LY++L G PF E + ++ ++ K P
Sbjct: 184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS-IP 242
Query: 279 N---VSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
+ +S L+ ++ DP R++ ++ H W
Sbjct: 243 DDIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 35/289 (12%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV + C +RDT +++A K + + + RE+ ++K L K+ ++V+L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIK-KIALREIRMLKQL-KHPNLVNL 67
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRD 177
E +HLV E C+ L + + E ++T ++ V CHKH IHRD
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRD 127
Query: 178 LKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVL--KRNYGPEI 234
+KPEN L ++S +K DFG + + P + + + V + +Y +PE+L YGP +
Sbjct: 128 VKPENILIT---KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPV 184
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDF------------------KRDP 276
D+W+ G + LL GVP + +S+ I + L D DP
Sbjct: 185 DVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDP 244
Query: 277 ---------WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
+PN+S A L++ L DP RLT +Q+L HP+ +N ++
Sbjct: 245 EDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 136/264 (51%), Gaps = 12/264 (4%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D + + R LG+G+FG YL ++ + ++A K + K ++ +RRE+ I HL
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL-H 81
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +I+ L D ++L++E GEL+ + + E+ A + + + + CH
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHG 141
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RN 229
VIHRD+KPEN LK DFG S+ P R + G+ Y+ PE+++ R
Sbjct: 142 KKVIHRDIKPEN---LLLGLKGELKIADFGWSV-HAPSLRRKTMCGTLDYLPPEMIEGRM 197
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP-NVSESAKSLV 288
+ ++D+W GV+ Y LL G PPF + S + I++ +D K +P +V A+ L+
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVK--VDLK---FPASVPTGAQDLI 252
Query: 289 RQMLEPDPKLRLTAKQVLEHPWLQ 312
++L +P RL QV HPW++
Sbjct: 253 SKLLRHNPSERLPLAQVSAHPWVR 276
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 146/275 (53%), Gaps = 12/275 (4%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G G+ + R + +L+A K + RK + + + EV IM+ ++ ++V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDY-QHENVVEM 86
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRD 177
+ + + +VME EGG L D IV E AAV +++ + + H GVIHRD
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 145
Query: 178 LKPENFLFANKKENSPLKAIDFGL-SIFFKPGERFSEIVGSPYYMAPEVLKR-NYGPEID 235
+K ++ L + + +K DFG + K R +VG+PY+MAPE++ R YGPE+D
Sbjct: 146 IKSDSILLTH---DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 202
Query: 236 IWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPD 295
IWS G+++ ++ G PP++ E A ++R + + VS S K + ++L D
Sbjct: 203 IWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 261
Query: 296 PKLRLTAKQVLEHPWLQNA-KKAPNVPLGDVVRSR 329
P R TA ++L+HP+L A A VPL R+R
Sbjct: 262 PAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR 296
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 146/275 (53%), Gaps = 12/275 (4%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G G+ + R + +L+A K + RK + + + EV IM+ ++ ++V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDY-QHENVVEM 82
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRD 177
+ + + +VME EGG L D IV E AAV +++ + + H GVIHRD
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 178 LKPENFLFANKKENSPLKAIDFGL-SIFFKPGERFSEIVGSPYYMAPEVLKR-NYGPEID 235
+K ++ L + + +K DFG + K R +VG+PY+MAPE++ R YGPE+D
Sbjct: 142 IKSDSILLTH---DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 198
Query: 236 IWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPD 295
IWS G+++ ++ G PP++ E A ++R + + VS S K + ++L D
Sbjct: 199 IWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 257
Query: 296 PKLRLTAKQVLEHPWLQNA-KKAPNVPLGDVVRSR 329
P R TA ++L+HP+L A A VPL R+R
Sbjct: 258 PAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR 292
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 146/275 (53%), Gaps = 12/275 (4%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G G+ + R + +L+A K + RK + + + EV IM+ ++ ++V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDY-QHENVVEM 91
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRD 177
+ + + +VME EGG L D IV E AAV +++ + + H GVIHRD
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 150
Query: 178 LKPENFLFANKKENSPLKAIDFGL-SIFFKPGERFSEIVGSPYYMAPEVLKR-NYGPEID 235
+K ++ L + + +K DFG + K R +VG+PY+MAPE++ R YGPE+D
Sbjct: 151 IKSDSILLTH---DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 207
Query: 236 IWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPD 295
IWS G+++ ++ G PP++ E A ++R + + VS S K + ++L D
Sbjct: 208 IWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 266
Query: 296 PKLRLTAKQVLEHPWLQNA-KKAPNVPLGDVVRSR 329
P R TA ++L+HP+L A A VPL R+R
Sbjct: 267 PAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR 301
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 146/275 (53%), Gaps = 12/275 (4%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G G+ + R + +L+A K + RK + + + EV IM+ ++ ++V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDY-QHENVVEM 93
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRD 177
+ + + +VME EGG L D IV E AAV +++ + + H GVIHRD
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 152
Query: 178 LKPENFLFANKKENSPLKAIDFGL-SIFFKPGERFSEIVGSPYYMAPEVLKR-NYGPEID 235
+K ++ L + + +K DFG + K R +VG+PY+MAPE++ R YGPE+D
Sbjct: 153 IKSDSILLTH---DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 209
Query: 236 IWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPD 295
IWS G+++ ++ G PP++ E A ++R + + VS S K + ++L D
Sbjct: 210 IWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 268
Query: 296 PKLRLTAKQVLEHPWLQNA-KKAPNVPLGDVVRSR 329
P R TA ++L+HP+L A A VPL R+R
Sbjct: 269 PAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR 303
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 146/275 (53%), Gaps = 12/275 (4%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G G+ + R + +L+A K + RK + + + EV IM+ ++ ++V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDY-QHENVVEM 136
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRD 177
+ + + +VME EGG L D IV E AAV +++ + + H GVIHRD
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 195
Query: 178 LKPENFLFANKKENSPLKAIDFGL-SIFFKPGERFSEIVGSPYYMAPEVLKR-NYGPEID 235
+K ++ L + + +K DFG + K R +VG+PY+MAPE++ R YGPE+D
Sbjct: 196 IKSDSILLTH---DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 252
Query: 236 IWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPD 295
IWS G+++ ++ G PP++ E A ++R + + VS S K + ++L D
Sbjct: 253 IWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 311
Query: 296 PKLRLTAKQVLEHPWLQNA-KKAPNVPLGDVVRSR 329
P R TA ++L+HP+L A A VPL R+R
Sbjct: 312 PAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR 346
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 146/275 (53%), Gaps = 12/275 (4%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G G+ + R + +L+A K + RK + + + EV IM+ ++ ++V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDY-QHENVVEM 213
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRD 177
+ + + +VME EGG L D IV E AAV +++ + + H GVIHRD
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 272
Query: 178 LKPENFLFANKKENSPLKAIDFGL-SIFFKPGERFSEIVGSPYYMAPEVLKR-NYGPEID 235
+K ++ L + + +K DFG + K R +VG+PY+MAPE++ R YGPE+D
Sbjct: 273 IKSDSILLTH---DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 329
Query: 236 IWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPD 295
IWS G+++ ++ G PP++ E A ++R + + VS S K + ++L D
Sbjct: 330 IWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 388
Query: 296 PKLRLTAKQVLEHPWLQNA-KKAPNVPLGDVVRSR 329
P R TA ++L+HP+L A A VPL R+R
Sbjct: 389 PAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR 423
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 144/295 (48%), Gaps = 29/295 (9%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 5 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 60
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 61 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW----LQNAKKAPNVPLGDVVRS 328
+ + +L+ ++L +P R+T + + W L+ K P V G V S
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSES 285
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 144/295 (48%), Gaps = 29/295 (9%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 6 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 61
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 62 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 231
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW----LQNAKKAPNVPLGDVVRS 328
+ + +L+ ++L +P R+T + + W L+ K P V G V S
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSES 286
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 134/266 (50%), Gaps = 10/266 (3%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G F + D DT+E+ A K + K L + + E++I + L + +V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 83
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
ED++ V +V+ELC L + R TE A R IV Q H++ VIHRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFK-PGERFSEIVGSPYYMAPEVL-KRNYGPEIDI 236
K N LF N E+ +K DFGL+ + GER + G+P Y+APEVL K+ + E+D+
Sbjct: 144 KLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
WS G I+Y LL G PPF + I + + +++ A SL+++ML+ DP
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 256
Query: 297 KLRLTAKQVLEHPWLQNAKKAPNVPL 322
R T ++L + + +P+
Sbjct: 257 TARPTINELLNDEFFTSGYIPARLPI 282
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 21/279 (7%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG L ++ T A K + K + ++ E ++++ ++ + +LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
A + + + VME GGELF + +TE A IV ++ H V++RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 179 KPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKRN-YGPEIDI 236
K EN + ++ +K DFGL G G+P Y+APEVL+ N YG +D
Sbjct: 132 KLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
W GV++Y ++CG PF+ + + + + IL I F R +S AKSL+ +L+ DP
Sbjct: 189 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDP 244
Query: 297 KLRL-----TAKQVLEHPWLQNAKKAPNVPLGDVVRSRL 330
K RL AK+V+EH + ++ DVV+ +L
Sbjct: 245 KQRLGGGPSDAKEVMEHRFFL------SINWQDVVQKKL 277
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 21/279 (7%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG L ++ T A K + K + ++ E ++++ ++ + +LK
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 76
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
A + + + VME GGELF + +TE A IV ++ H V++RD+
Sbjct: 77 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 136
Query: 179 KPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKRN-YGPEIDI 236
K EN + ++ +K DFGL G G+P Y+APEVL+ N YG +D
Sbjct: 137 KLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 193
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
W GV++Y ++CG PF+ + + + + IL I F R +S AKSL+ +L+ DP
Sbjct: 194 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDP 249
Query: 297 KLRL-----TAKQVLEHPWLQNAKKAPNVPLGDVVRSRL 330
K RL AK+V+EH + ++ DVV+ +L
Sbjct: 250 KQRLGGGPSDAKEVMEHRFFL------SINWQDVVQKKL 282
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 144/295 (48%), Gaps = 29/295 (9%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 6 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 61
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 62 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 231
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW----LQNAKKAPNVPLGDVVRS 328
+ + +L+ ++L +P R+T + + W L+ K P V G V S
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSES 286
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 144/295 (48%), Gaps = 29/295 (9%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 6 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 61
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 62 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 231
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW----LQNAKKAPNVPLGDVVRS 328
+ + +L+ ++L +P R+T + + W L+ K P V G V S
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSES 286
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 144/295 (48%), Gaps = 29/295 (9%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 6 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 61
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 62 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 231
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW----LQNAKKAPNVPLGDVVRS 328
+ + +L+ ++L +P R+T + + W L+ K P V G V S
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSES 286
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 134/266 (50%), Gaps = 10/266 (3%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G F + D DT+E+ A K + K L + + E++I + L + +V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 83
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
ED++ V +V+ELC L + R TE A R IV Q H++ VIHRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFK-PGERFSEIVGSPYYMAPEVL-KRNYGPEIDI 236
K N LF N E+ +K DFGL+ + GER + G+P Y+APEVL K+ + E+D+
Sbjct: 144 KLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
WS G I+Y LL G PPF + I + + +++ A SL+++ML+ DP
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 256
Query: 297 KLRLTAKQVLEHPWLQNAKKAPNVPL 322
R T ++L + + +P+
Sbjct: 257 TARPTINELLNDEFFTSGYIPARLPI 282
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 134/266 (50%), Gaps = 10/266 (3%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G F + D DT+E+ A K + K L + + E++I + L + +V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 87
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
ED++ V +V+ELC L + R TE A R IV Q H++ VIHRDL
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFK-PGERFSEIVGSPYYMAPEVL-KRNYGPEIDI 236
K N LF N E+ +K DFGL+ + GER + G+P Y+APEVL K+ + E+D+
Sbjct: 148 KLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 204
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
WS G I+Y LL G PPF + I + + +++ A SL+++ML+ DP
Sbjct: 205 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 260
Query: 297 KLRLTAKQVLEHPWLQNAKKAPNVPL 322
R T ++L + + +P+
Sbjct: 261 TARPTINELLNDEFFTSGYIPARLPI 286
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 21/279 (7%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG L ++ T A K + K + ++ E ++++ ++ + +LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
A + + + VME GGELF + +TE A IV ++ H V++RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 179 KPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKRN-YGPEIDI 236
K EN + ++ +K DFGL G G+P Y+APEVL+ N YG +D
Sbjct: 132 KLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
W GV++Y ++CG PF+ + + + + IL I F R +S AKSL+ +L+ DP
Sbjct: 189 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDP 244
Query: 297 KLRLT-----AKQVLEHPWLQNAKKAPNVPLGDVVRSRL 330
K RL AK+V+EH + ++ DVV+ +L
Sbjct: 245 KQRLGGGPSDAKEVMEHRFFL------SINWQDVVQKKL 277
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 21/279 (7%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG L ++ T A K + K + ++ E ++++ ++ + +LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
A + + + VME GGELF + +TE A IV ++ H V++RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 179 KPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKRN-YGPEIDI 236
K EN + ++ +K DFGL G G+P Y+APEVL+ N YG +D
Sbjct: 132 KLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
W GV++Y ++CG PF+ + + + + IL I F R +S AKSL+ +L+ DP
Sbjct: 189 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDP 244
Query: 297 KLRL-----TAKQVLEHPWLQNAKKAPNVPLGDVVRSRL 330
K RL AK+V+EH + ++ DVV+ +L
Sbjct: 245 KQRLGGGPSDAKEVMEHRFFL------SINWQDVVQKKL 277
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 21/279 (7%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG L ++ T A K + K + ++ E ++++ ++ + +LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
A + + + VME GGELF + +TE A IV ++ H V++RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 179 KPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKRN-YGPEIDI 236
K EN + ++ +K DFGL G G+P Y+APEVL+ N YG +D
Sbjct: 132 KLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
W GV++Y ++CG PF+ + + + + IL I F R +S AKSL+ +L+ DP
Sbjct: 189 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDP 244
Query: 297 KLRLT-----AKQVLEHPWLQNAKKAPNVPLGDVVRSRL 330
K RL AK+V+EH + ++ DVV+ +L
Sbjct: 245 KQRLGGGPSDAKEVMEHRFFL------SINWQDVVQKKL 277
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 21/279 (7%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG L ++ T A K + K + ++ E ++++ ++ + +LK
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 74
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
A + + + VME GGELF + +TE A IV ++ H V++RD+
Sbjct: 75 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 134
Query: 179 KPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKRN-YGPEIDI 236
K EN + ++ +K DFGL G G+P Y+APEVL+ N YG +D
Sbjct: 135 KLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 191
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
W GV++Y ++CG PF+ + + + + IL I F R +S AKSL+ +L+ DP
Sbjct: 192 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDP 247
Query: 297 KLRL-----TAKQVLEHPWLQNAKKAPNVPLGDVVRSRL 330
K RL AK+V+EH + ++ DVV+ +L
Sbjct: 248 KQRLGGGPSDAKEVMEHRFFL------SINWQDVVQKKL 280
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 134/266 (50%), Gaps = 10/266 (3%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G F + D DT+E+ A K + K L + + E++I + L + +V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 105
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
ED++ V +V+ELC L + R TE A R IV Q H++ VIHRDL
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFK-PGERFSEIVGSPYYMAPEVL-KRNYGPEIDI 236
K N LF N E+ +K DFGL+ + GER + G+P Y+APEVL K+ + E+D+
Sbjct: 166 KLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 222
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
WS G I+Y LL G PPF + I + + +++ A SL+++ML+ DP
Sbjct: 223 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 278
Query: 297 KLRLTAKQVLEHPWLQNAKKAPNVPL 322
R T ++L + + +P+
Sbjct: 279 TARPTINELLNDEFFTSGYIPARLPI 304
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 21/279 (7%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG L ++ T A K + K + ++ E ++++ ++ + +LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
A + + + VME GGELF + +TE A IV ++ H V++RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 179 KPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKRN-YGPEIDI 236
K EN + ++ +K DFGL G G+P Y+APEVL+ N YG +D
Sbjct: 132 KLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
W GV++Y ++CG PF+ + + + + IL I F R +S AKSL+ +L+ DP
Sbjct: 189 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDP 244
Query: 297 KLRL-----TAKQVLEHPWLQNAKKAPNVPLGDVVRSRL 330
K RL AK+V+EH + ++ DVV+ +L
Sbjct: 245 KQRLGGGPSDAKEVMEHRFFL------SINWQDVVQKKL 277
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 134/266 (50%), Gaps = 10/266 (3%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G F + D DT+E+ A K + K L + + E++I + L + +V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 81
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
ED++ V +V+ELC L + R TE A R IV Q H++ VIHRDL
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFK-PGERFSEIVGSPYYMAPEVL-KRNYGPEIDI 236
K N LF N E+ +K DFGL+ + GER + G+P Y+APEVL K+ + E+D+
Sbjct: 142 KLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 198
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
WS G I+Y LL G PPF + I + + +++ A SL+++ML+ DP
Sbjct: 199 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 254
Query: 297 KLRLTAKQVLEHPWLQNAKKAPNVPL 322
R T ++L + + +P+
Sbjct: 255 TARPTINELLNDEFFTSGYIPARLPI 280
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 134/266 (50%), Gaps = 10/266 (3%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G F + D DT+E+ A K + K L + + E++I + L + +V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFH 107
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
ED++ V +V+ELC L + R TE A R IV Q H++ VIHRDL
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFK-PGERFSEIVGSPYYMAPEVL-KRNYGPEIDI 236
K N LF N E+ +K DFGL+ + GER + G+P Y+APEVL K+ + E+D+
Sbjct: 168 KLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 224
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
WS G I+Y LL G PPF + I + + +++ A SL+++ML+ DP
Sbjct: 225 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 280
Query: 297 KLRLTAKQVLEHPWLQNAKKAPNVPL 322
R T ++L + + +P+
Sbjct: 281 TARPTINELLNDEFFTSGYIPARLPI 306
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 37/291 (12%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL--------------------- 89
++Y + E+G+G +GV L + + A K +SK+KL
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 90 --RTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVM--ELCEGGELFDRIVA 145
+ I+ V +E+AI+K L + ++V L E +D N HL M EL G + + +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPT 130
Query: 146 RGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF 205
+E A + +++ ++ H +IHRD+KP N L E+ +K DFG+S F
Sbjct: 131 LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEF 187
Query: 206 KPGERF-SEIVGSPYYMAPEVLKRN----YGPEIDIWSAGVILYILLCGVPPFWAESEQG 260
K + S VG+P +MAPE L G +D+W+ GV LY + G PF E
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247
Query: 261 VAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
+ I ++F P +++E K L+ +ML+ +P+ R+ ++ HPW+
Sbjct: 248 LHSKIKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 147/305 (48%), Gaps = 23/305 (7%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S +S H R A N + G KE +E +Y V LG G FG Y I
Sbjct: 19 SKINSLAHLRA-APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL 77
Query: 78 LLACKSISKRKLRTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMEL 133
+A K + K ++ ++ + R EV ++K + S ++ L + E ++ L++E
Sbjct: 78 PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 137
Query: 134 CEG-GELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKEN 191
E +LFD I RG E A + ++E V+ CH GV+HRD+K EN L N+ E
Sbjct: 138 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE- 196
Query: 192 SPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCG 249
LK IDFG K +++ G+ Y PE ++ R +G +WS G++LY ++CG
Sbjct: 197 --LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Query: 250 VPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHP 309
PF + E I+RG + F++ VS + L+R L P R T +++ HP
Sbjct: 254 DIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHP 303
Query: 310 WLQNA 314
W+Q+
Sbjct: 304 WMQDV 308
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 147/305 (48%), Gaps = 23/305 (7%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S +S H R A N + G KE +E +Y V LG G FG Y I
Sbjct: 4 SKINSLAHLRA-APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL 62
Query: 78 LLACKSISKRKLRTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMEL 133
+A K + K ++ ++ + R EV ++K + S ++ L + E ++ L++E
Sbjct: 63 PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 122
Query: 134 CEG-GELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKEN 191
E +LFD I RG E A + ++E V+ CH GV+HRD+K EN L N+ E
Sbjct: 123 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE- 181
Query: 192 SPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCG 249
LK IDFG K +++ G+ Y PE ++ R +G +WS G++LY ++CG
Sbjct: 182 --LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 250 VPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHP 309
PF + E I+RG + F++ VS + L+R L P R T +++ HP
Sbjct: 239 DIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 310 WLQNA 314
W+Q+
Sbjct: 289 WMQDV 293
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 147/305 (48%), Gaps = 23/305 (7%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S +S H R A N + G KE +E +Y V LG G FG Y I
Sbjct: 24 SKINSLAHLRA-APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL 82
Query: 78 LLACKSISKRKLRTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMEL 133
+A K + K ++ ++ + R EV ++K + S ++ L + E ++ L++E
Sbjct: 83 PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 142
Query: 134 CEG-GELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKEN 191
E +LFD I RG E A + ++E V+ CH GV+HRD+K EN L N+ E
Sbjct: 143 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE- 201
Query: 192 SPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCG 249
LK IDFG K +++ G+ Y PE ++ R +G +WS G++LY ++CG
Sbjct: 202 --LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
Query: 250 VPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHP 309
PF + E I+RG + F++ VS + L+R L P R T +++ HP
Sbjct: 259 DIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHP 308
Query: 310 WLQNA 314
W+Q+
Sbjct: 309 WMQDV 313
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 142/293 (48%), Gaps = 22/293 (7%)
Query: 30 AGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL 89
A N + G KE +E +Y V LG G FG Y I +A K + K ++
Sbjct: 2 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 61
Query: 90 RTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIV 144
++ + R EV ++K + S ++ L + E ++ L++E E +LFD I
Sbjct: 62 SDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT 121
Query: 145 ARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSI 203
RG E A + ++E V+ CH GV+HRD+K EN L N+ E LK IDFG
Sbjct: 122 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGA 178
Query: 204 FFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGV 261
K +++ G+ Y PE ++ R +G +WS G++LY ++CG PF + E
Sbjct: 179 LLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--- 234
Query: 262 AQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
I+RG + F++ VS + L+R L P R T +++ HPW+Q+
Sbjct: 235 ---IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 280
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 142/293 (48%), Gaps = 22/293 (7%)
Query: 30 AGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL 89
A N + G KE +E +Y V LG G FG Y I +A K + K ++
Sbjct: 22 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 81
Query: 90 RTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIV 144
++ + R EV ++K + S ++ L + E ++ L++E E +LFD I
Sbjct: 82 SDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT 141
Query: 145 ARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSI 203
RG E A + ++E V+ CH GV+HRD+K EN L N+ E LK IDFG
Sbjct: 142 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGA 198
Query: 204 FFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGV 261
K +++ G+ Y PE ++ R +G +WS G++LY ++CG PF + E
Sbjct: 199 LLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--- 254
Query: 262 AQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
I+RG + F++ VS + L+R L P R T +++ HPW+Q+
Sbjct: 255 ---IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 300
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 141/287 (49%), Gaps = 29/287 (10%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 4 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 59
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 60 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 119 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 229
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW----LQNAKKAPNV 320
+ + +L+ ++L +P R+T + + W L+ K P V
Sbjct: 230 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRV 276
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 147/305 (48%), Gaps = 23/305 (7%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S +S H R A N + G KE +E +Y V LG G FG Y I
Sbjct: 19 SKINSLAHLRA-APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL 77
Query: 78 LLACKSISKRKLRTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMEL 133
+A K + K ++ ++ + R EV ++K + S ++ L + E ++ L++E
Sbjct: 78 PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 137
Query: 134 CEG-GELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKEN 191
E +LFD I RG E A + ++E V+ CH GV+HRD+K EN L N+ E
Sbjct: 138 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE- 196
Query: 192 SPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCG 249
LK IDFG K +++ G+ Y PE ++ R +G +WS G++LY ++CG
Sbjct: 197 --LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Query: 250 VPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHP 309
PF + E I+RG + F++ VS + L+R L P R T +++ HP
Sbjct: 254 DIPFEHDEE------IIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHP 303
Query: 310 WLQNA 314
W+Q+
Sbjct: 304 WMQDV 308
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 142/287 (49%), Gaps = 29/287 (10%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 5 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 60
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 61 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P+ S+ + D+K +PW
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYS------DWKEKKTYLNPW 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW----LQNAKKAPNV 320
+ + +L+ ++L +P R+T + + W L+ K P V
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRV 277
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 141/287 (49%), Gaps = 29/287 (10%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 5 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 60
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 61 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW----LQNAKKAPNV 320
+ + +L+ ++L +P R+T + + W L+ K P V
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRV 277
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 141/287 (49%), Gaps = 29/287 (10%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 5 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 60
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 61 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW----LQNAKKAPNV 320
+ + +L+ ++L +P R+T + + W L+ K P V
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRV 277
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 142/293 (48%), Gaps = 22/293 (7%)
Query: 30 AGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL 89
A N + G KE +E +Y V LG G FG Y I +A K + K ++
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 62
Query: 90 RTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIV 144
++ + R EV ++K + S ++ L + E ++ L++E E +LFD I
Sbjct: 63 SDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT 122
Query: 145 ARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSI 203
RG E A + ++E V+ CH GV+HRD+K EN L N+ E LK IDFG
Sbjct: 123 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGA 179
Query: 204 FFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGV 261
K +++ G+ Y PE ++ R +G +WS G++LY ++CG PF + E
Sbjct: 180 LLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--- 235
Query: 262 AQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
I+RG + F++ VS + L+R L P R T +++ HPW+Q+
Sbjct: 236 ---IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 281
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 141/287 (49%), Gaps = 29/287 (10%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 5 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEIXINKM 60
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 61 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW----LQNAKKAPNV 320
+ + +L+ ++L +P R+T + + W L+ K P V
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRV 277
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 141/287 (49%), Gaps = 29/287 (10%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 5 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEIXINKM 60
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 61 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW----LQNAKKAPNV 320
+ + +L+ ++L +P R+T + + W L+ K P V
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRV 277
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 142/293 (48%), Gaps = 22/293 (7%)
Query: 30 AGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL 89
A N + G KE +E +Y V LG G FG Y I +A K + K ++
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 62
Query: 90 RTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIV 144
++ + R EV ++K + S ++ L + E ++ L++E E +LFD I
Sbjct: 63 SDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT 122
Query: 145 ARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSI 203
RG E A + ++E V+ CH GV+HRD+K EN L N+ E LK IDFG
Sbjct: 123 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGA 179
Query: 204 FFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGV 261
K +++ G+ Y PE ++ R +G +WS G++LY ++CG PF + E
Sbjct: 180 LLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--- 235
Query: 262 AQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
I+RG + F++ VS + L+R L P R T +++ HPW+Q+
Sbjct: 236 ---IIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 281
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 142/293 (48%), Gaps = 22/293 (7%)
Query: 30 AGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL 89
A N + G KE +E +Y V LG G FG Y I +A K + K ++
Sbjct: 2 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 61
Query: 90 RTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIV 144
++ + R EV ++K + S ++ L + E ++ L++E E +LFD I
Sbjct: 62 SDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT 121
Query: 145 ARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSI 203
RG E A + ++E V+ CH GV+HRD+K EN L N+ E LK IDFG
Sbjct: 122 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGA 178
Query: 204 FFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGV 261
K +++ G+ Y PE ++ R +G +WS G++LY ++CG PF + E
Sbjct: 179 LLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--- 234
Query: 262 AQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
I+RG + F++ VS + L+R L P R T +++ HPW+Q+
Sbjct: 235 ---IIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 280
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 142/293 (48%), Gaps = 22/293 (7%)
Query: 30 AGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKL 89
A N + G KE +E +Y V LG G FG Y I +A K + K ++
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 62
Query: 90 RTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIV 144
++ + R EV ++K + S ++ L + E ++ L++E E +LFD I
Sbjct: 63 SDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT 122
Query: 145 ARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSI 203
RG E A + ++E V+ CH GV+HRD+K EN L N+ E LK IDFG
Sbjct: 123 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGA 179
Query: 204 FFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGV 261
K +++ G+ Y PE ++ R +G +WS G++LY ++CG PF + E
Sbjct: 180 LLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--- 235
Query: 262 AQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
I+RG + F++ VS + L+R L P R T +++ HPW+Q+
Sbjct: 236 ---IIRGQVFFRQ----RVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQDV 281
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 137/279 (49%), Gaps = 25/279 (8%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 6 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEIXINKM 61
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 62 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 231
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
+ + +L+ ++L +P R+T + + W K
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 137/279 (49%), Gaps = 25/279 (8%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 6 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 61
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 62 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 231
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
+ + +L+ ++L +P R+T + + W K
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 137/279 (49%), Gaps = 25/279 (8%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 5 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 60
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 61 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
+ + +L+ ++L +P R+T + + W K
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 137/279 (49%), Gaps = 25/279 (8%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 5 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 60
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 61 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
+ + +L+ ++L +P R+T + + W K
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 137/279 (49%), Gaps = 25/279 (8%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 5 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 60
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 61 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
+ + +L+ ++L +P R+T + + W K
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 137/279 (49%), Gaps = 25/279 (8%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 5 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 60
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 61 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
+ + +L+ ++L +P R+T + + W K
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 22/277 (7%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR---EV 102
KE +E +Y V LG G FG Y I +A K + K ++ ++ + R EV
Sbjct: 3 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 62
Query: 103 AIMKHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIVARGHYTERAAAAVTRT 160
++K + S ++ L + E ++ L++E E +LFD I RG E A +
Sbjct: 63 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQ 122
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY 219
++E V+ CH GV+HRD+K EN L N+ E LK IDFG K +++ G+
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRV 178
Query: 220 YMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y PE ++ R +G +WS G++LY ++CG PF + E I+RG + F++
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ--- 229
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
VS + L+R L P R T +++ HPW+Q+
Sbjct: 230 -RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L +T A K + K+K+ +I+ E I++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G ++E A IV + H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN + + +K DFGL+ K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLMI---DQQGYIKVTDFGLAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 136/273 (49%), Gaps = 25/273 (9%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 6 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 61
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 62 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 231
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW 310
+ + +L+ ++L +P R+T + + W
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 264
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 22/277 (7%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR---EV 102
KE +E +Y V LG G FG Y I +A K + K ++ ++ + R EV
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 63
Query: 103 AIMKHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIVARGHYTERAAAAVTRT 160
++K + S ++ L + E ++ L++E E +LFD I RG E A +
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY 219
++E V+ CH GV+HRD+K EN L N+ E LK IDFG K +++ G+
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRV 179
Query: 220 YMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y PE ++ R +G +WS G++LY ++CG PF + E I+RG + F++
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ--- 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
VS + L+R L P R T +++ HPW+Q+
Sbjct: 231 -RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 136/273 (49%), Gaps = 25/273 (9%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 5 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 60
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 61 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW 310
+ + +L+ ++L +P R+T + + W
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRW 263
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 149/338 (44%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIE--DRYLVDRE 58
MGN + +E VK E A K+ P +N D++ +
Sbjct: 1 MGNAAAAKKGSEQESVK-----------EFLAKAKEDFLKKWESPAQNTAHLDQFERIKT 49
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L ++T A K + K+K+ I+ E I++ + +V L+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLE 108
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++VME GGE+F + G ++E A IV + H +I+RDL
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN + + +K DFG + K R + G+P Y+APE +L + Y +D W
Sbjct: 169 KPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 279
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 149/338 (44%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIE--DRYLVDRE 58
MGN + +E VK E A K+ P +N D++ +
Sbjct: 1 MGNAAAAKKGSEQESVK-----------EFLAKAKEDFLKKWESPAQNTAHLDQFERIKT 49
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L ++T A K + K+K+ I+ E I++ + +V L+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLE 108
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++VME GGE+F + G ++E A IV + H +I+RDL
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN L + ++ DFG + K R + G+P Y+APE +L + Y +D W
Sbjct: 169 KPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 279
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 280 KRFGNLKNGVNDIXNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 22/277 (7%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR---EV 102
KE +E +Y V LG G FG Y I +A K + K ++ ++ + R EV
Sbjct: 3 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 62
Query: 103 AIMKHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIVARGHYTERAAAAVTRT 160
++K + S ++ L + E ++ L++E E +LFD I RG E A +
Sbjct: 63 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 122
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY 219
++E V+ CH GV+HRD+K EN L N+ E LK IDFG K +++ G+
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRV 178
Query: 220 YMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y PE ++ R +G +WS G++LY ++CG PF + E I+RG + F++
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ--- 229
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
VS + L+R L P R T +++ HPW+Q+
Sbjct: 230 -RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L ++T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G ++E A IV + H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + ++ DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 22/277 (7%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR---EV 102
KE +E +Y V LG G FG Y I +A K + K ++ ++ + R EV
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 63
Query: 103 AIMKHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIVARGHYTERAAAAVTRT 160
++K + S ++ L + E ++ L++E E +LFD I RG E A +
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY 219
++E V+ CH GV+HRD+K EN L N+ E LK IDFG K +++ G+
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRV 179
Query: 220 YMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y PE ++ R +G +WS G++LY ++CG PF + E I+RG + F++
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ--- 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
VS + L+R L P R T +++ HPW+Q+
Sbjct: 231 -RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L ++T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G ++E A IV + H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + ++ DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L ++T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G ++E A IV + H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + ++ DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 149/338 (44%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIE--DRYLVDRE 58
MGN + +E VK E A K+ P +N D++ +
Sbjct: 1 MGNAAAAKKGXEQESVK-----------EFLAKAKEDFLKKWESPAQNTAHLDQFERIKT 49
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L ++T A K + K+K+ I+ E I++ + +V L+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLE 108
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++VME GGE+F + G ++E A IV + H +I+RDL
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN L + ++ DFG + K R + G+P Y+APE +L + Y +D W
Sbjct: 169 KPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 279
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 22/277 (7%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR---EV 102
KE +E +Y V LG G FG Y I +A K + K ++ ++ + R EV
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 63
Query: 103 AIMKHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIVARGHYTERAAAAVTRT 160
++K + S ++ L + E ++ L++E E +LFD I RG E A +
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY 219
++E V+ CH GV+HRD+K EN L N+ E LK IDFG K +++ G+
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRV 179
Query: 220 YMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y PE ++ R +G +WS G++LY ++CG PF + E I+RG + F++
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ--- 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
VS + L+R L P R T +++ HPW+Q+
Sbjct: 231 -RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 148/338 (43%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIE--DRYLVDRE 58
MGN + +E VK E A K+ P +N D++ R
Sbjct: 1 MGNAAAAKKGXEQESVK-----------EFLAKAKEDFLKKWESPAQNTAHLDQFERIRT 49
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L ++T A K + K+K+ I+ E I + + +V L+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAV-NFPFLVKLE 108
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++V+E GGE+F + G ++E A IV + H +I+RDL
Sbjct: 109 FSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN L + +K DFG + K R + G+P Y+APE +L + Y +D W
Sbjct: 169 KPENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 279
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 149/338 (44%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIE--DRYLVDRE 58
MGN + +E VK E A K+ P +N D++ +
Sbjct: 21 MGNAAAAKKGSEQESVK-----------EFLAKAKEDFLKKWESPAQNTAHLDQFERIKT 69
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L ++T A K + K+K+ I+ E I++ + +V L+
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLE 128
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++VME GGE+F + G ++E A IV + H +I+RDL
Sbjct: 129 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN L + ++ DFG + K R + G+P Y+APE +L + Y +D W
Sbjct: 189 KPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWW 243
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 244 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 299
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 300 KRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 337
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 22/277 (7%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR---EV 102
KE +E +Y V LG G FG Y I +A K + K ++ ++ + R EV
Sbjct: 26 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 85
Query: 103 AIMKHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIVARGHYTERAAAAVTRT 160
++K + S ++ L + E ++ L++E E +LFD I RG E A +
Sbjct: 86 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 145
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY 219
++E V+ CH GV+HRD+K EN L N+ E LK IDFG K +++ G+
Sbjct: 146 VLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRV 201
Query: 220 YMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y PE ++ R +G +WS G++LY ++CG PF + E I+RG + F++
Sbjct: 202 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ--- 252
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
VS + L+R L P R T +++ HPW+Q+
Sbjct: 253 -RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 288
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 140/287 (48%), Gaps = 29/287 (10%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G G L ++R T E +A K + ++ AVD +++++E+ I K
Sbjct: 5 VEDWDLV-QTLGEGAAGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKM 60
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 61 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 120 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 230
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW----LQNAKKAPNV 320
+ + +L+ ++L +P R+T + + W L+ K P V
Sbjct: 231 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRV 277
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 22/277 (7%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR---EV 102
KE +E +Y V LG G FG Y I +A K + K ++ ++ + R EV
Sbjct: 2 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 61
Query: 103 AIMKHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIVARGHYTERAAAAVTRT 160
++K + S ++ L + E ++ L++E E +LFD I RG E A +
Sbjct: 62 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 121
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY 219
++E V+ CH GV+HRD+K EN L N+ E LK IDFG K +++ G+
Sbjct: 122 VLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRV 177
Query: 220 YMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y PE ++ R +G +WS G++LY ++CG PF + E I+RG + F++
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ--- 228
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
VS + L+R L P R T +++ HPW+Q+
Sbjct: 229 -RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 264
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 149/338 (44%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIE--DRYLVDRE 58
MGN + +E VK E A K+ P +N D++ +
Sbjct: 1 MGNAAAAKKGSEQESVK-----------EFLAKAKEDFLKKWESPAQNTAHLDQFERIKT 49
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L ++T A K + K+K+ I+ E I++ + +V L+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLE 108
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++VME GGE+F + G ++E A IV + H +I+RDL
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN L + ++ DFG + K R + G+P Y+APE +L + Y +D W
Sbjct: 169 KPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 279
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 139/277 (50%), Gaps = 20/277 (7%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y V + +GRG FG L + TR++ A K +SK ++ D E IM +
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 129
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+V L A +DD +++VME GG+L + +++ E+ A T +V + H G
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMG 188
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGE-RFSEIVGSPYYMAPEVLKRN- 229
IHRD+KP+N L ++ LK DFG + K G R VG+P Y++PEVLK
Sbjct: 189 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 230 ----YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAIL--RGLIDFKRDPWPNVSES 283
YG E D WS GV LY +L G PF+A+S G I+ + + F D ++S+
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKE 303
Query: 284 AKSLVRQMLEPDPKLRLTAKQVLE---HPWLQNAKKA 317
AK+L+ L D ++RL V E H + +N + A
Sbjct: 304 AKNLICAFLT-DREVRLGRNGVEEIKRHLFFKNDQWA 339
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 147/338 (43%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDR--E 58
MGN + +E VK E A K+ P +N DR
Sbjct: 1 MGNAAAAKKGSEQESVK-----------EFLAKAKEDFLKKWETPSQNTAQLDQFDRIKT 49
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L +++ A K + K+K+ I+ E I++ + +V L+
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLE 108
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++VME GGE+F + G ++E A IV + H +I+RDL
Sbjct: 109 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN L + ++ DFG + K R + G+P Y+APE +L + Y +D W
Sbjct: 169 KPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLT 279
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 139/277 (50%), Gaps = 20/277 (7%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y V + +GRG FG L + TR++ A K +SK ++ D E IM +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 134
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+V L A +DD +++VME GG+L + +++ E+ A T +V + H G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGE-RFSEIVGSPYYMAPEVLKRN- 229
IHRD+KP+N L ++ LK DFG + K G R VG+P Y++PEVLK
Sbjct: 194 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 230 ----YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAIL--RGLIDFKRDPWPNVSES 283
YG E D WS GV LY +L G PF+A+S G I+ + + F D ++S+
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKE 308
Query: 284 AKSLVRQMLEPDPKLRLTAKQVLE---HPWLQNAKKA 317
AK+L+ L D ++RL V E H + +N + A
Sbjct: 309 AKNLICAFLT-DREVRLGRNGVEEIKRHLFFKNDQWA 344
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 144/284 (50%), Gaps = 27/284 (9%)
Query: 40 VLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR 99
V G PK+ +Y ++G+G G Y +D T + +A I + L+ + +
Sbjct: 13 VSVGDPKK----KYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELII 65
Query: 100 REVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTR 159
E+ +M+ KN +IV+ ++ + + +VME GG L D +V E AAV R
Sbjct: 66 NEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCR 123
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-RFSEIVGSP 218
++ ++ H + VIHRD+K +N L + +K DFG P + + SE+VG+P
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSEMVGTP 180
Query: 219 YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y+MAPEV+ R YGP++DIWS G++ ++ G PP+ E+ LR L +
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-------LRALYLIATNGT 233
Query: 278 PNVSESAK------SLVRQMLEPDPKLRLTAKQVLEHPWLQNAK 315
P + K + + L+ D + R +AK++L+H +L+ AK
Sbjct: 234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAK 277
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 139/277 (50%), Gaps = 20/277 (7%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y V + +GRG FG L + TR++ A K +SK ++ D E IM +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 134
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+V L A +DD +++VME GG+L + +++ E+ A T +V + H G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGE-RFSEIVGSPYYMAPEVLKRN- 229
IHRD+KP+N L ++ LK DFG + K G R VG+P Y++PEVLK
Sbjct: 194 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 230 ----YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAIL--RGLIDFKRDPWPNVSES 283
YG E D WS GV LY +L G PF+A+S G I+ + + F D ++S+
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKE 308
Query: 284 AKSLVRQMLEPDPKLRLTAKQVLE---HPWLQNAKKA 317
AK+L+ L D ++RL V E H + +N + A
Sbjct: 309 AKNLICAFL-TDREVRLGRNGVEEIKRHLFFKNDQWA 344
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 23/305 (7%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S +S H R A N + G KE +E +Y V LG G FG Y I
Sbjct: 5 SKINSLAHLRA-APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL 63
Query: 78 LLACKSISKRKLRTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMEL 133
+A K + K ++ ++ + R EV ++K + S ++ L + E ++ L++E
Sbjct: 64 PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 123
Query: 134 CEG-GELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKEN 191
E +LFD I RG E A + ++E V+ CH GV+HRD+K EN L N+ E
Sbjct: 124 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE- 182
Query: 192 SPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCG 249
LK IDFG K +++ G+ Y PE ++ R +G +WS G++LY ++CG
Sbjct: 183 --LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 250 VPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHP 309
PF + E I+ G + F++ VS + L+R L P R T +++ HP
Sbjct: 240 DIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 310 WLQNA 314
W+Q+
Sbjct: 290 WMQDV 294
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 140/311 (45%), Gaps = 27/311 (8%)
Query: 28 KEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELLACKSIS 85
KE A K+ P +N DR LG G FG L +++ A K +
Sbjct: 3 KEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 62
Query: 86 KRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVA 145
K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+F +
Sbjct: 63 KQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 121
Query: 146 RGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF 205
G ++E A IV + H +I+RDLKPEN L E ++ DFG +
Sbjct: 122 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DEQGYIQVTDFGFAKRV 178
Query: 206 KPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQA 264
K R + G+P Y+APE +L + Y +D W+ GV++Y + G PPF+A+ + +
Sbjct: 179 KG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 236
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-------- 311
I+ G + F + S K L+R +L+ D R + H W
Sbjct: 237 IVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 292
Query: 312 -QNAKKAPNVP 321
Q +AP +P
Sbjct: 293 YQRKVEAPFIP 303
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 27/317 (8%)
Query: 22 SHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELL 79
S + KE A K+ P +N DR LG G FG L +++
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 80 ACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL 139
A K + K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 140 FDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDF 199
F + G ++E A IV + H +I+RDLKPEN L + ++ DF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 200 GLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESE 258
G + K R + G+P Y+APE +L + Y +D W+ GV++Y + G PPF+A+
Sbjct: 186 GFAKRVKG--RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 259 QGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-- 311
+ + I+ G + F + S K L+R +L+ D R + H W
Sbjct: 244 IQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
Query: 312 -------QNAKKAPNVP 321
Q +AP +P
Sbjct: 300 TDWIAIYQRKVEAPFIP 316
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L +T A K + K+K+ +I+ E I++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G ++E A IV + H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN + + ++ DFGL+ K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLMI---DQQGYIQVTDFGLAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 23/305 (7%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S +S H R A N + G KE +E +Y V LG G FG Y I
Sbjct: 4 SKINSLAHLRA-APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL 62
Query: 78 LLACKSISKRKLRTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMEL 133
+A K + K ++ ++ + R EV ++K + S ++ L + E ++ L++E
Sbjct: 63 PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 122
Query: 134 CEG-GELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKEN 191
E +LFD I RG E A + ++E V+ CH GV+HRD+K EN L N+ E
Sbjct: 123 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE- 181
Query: 192 SPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCG 249
LK IDFG K +++ G+ Y PE ++ R +G +WS G++LY ++CG
Sbjct: 182 --LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 250 VPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHP 309
PF + E I+ G + F++ VS + L+R L P R T +++ HP
Sbjct: 239 DIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 310 WLQNA 314
W+Q+
Sbjct: 289 WMQDV 293
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 23/305 (7%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S +S H R A N + G KE +E +Y V LG G FG Y I
Sbjct: 5 SKINSLAHLRA-APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL 63
Query: 78 LLACKSISKRKLRTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMEL 133
+A K + K ++ ++ + R EV ++K + S ++ L + E ++ L++E
Sbjct: 64 PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 123
Query: 134 CEG-GELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKEN 191
E +LFD I RG E A + ++E V+ CH GV+HRD+K EN L N+ E
Sbjct: 124 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE- 182
Query: 192 SPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCG 249
LK IDFG K +++ G+ Y PE ++ R +G +WS G++LY ++CG
Sbjct: 183 --LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 250 VPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHP 309
PF + E I+ G + F++ VS + L+R L P R T +++ HP
Sbjct: 240 DIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 310 WLQNA 314
W+Q+
Sbjct: 290 WMQDV 294
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 23/305 (7%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S +S H R A N + G KE +E +Y V LG G FG Y I
Sbjct: 4 SKINSLAHLRA-APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL 62
Query: 78 LLACKSISKRKLRTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMEL 133
+A K + K ++ ++ + R EV ++K + S ++ L + E ++ L++E
Sbjct: 63 PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 122
Query: 134 CEG-GELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKEN 191
E +LFD I RG E A + ++E V+ CH GV+HRD+K EN L N+ E
Sbjct: 123 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE- 181
Query: 192 SPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCG 249
LK IDFG K +++ G+ Y PE ++ R +G +WS G++LY ++CG
Sbjct: 182 --LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 250 VPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHP 309
PF + E I+ G + F++ VS + L+R L P R T +++ HP
Sbjct: 239 DIPFEHDEE------IIGGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 310 WLQNA 314
W+Q+
Sbjct: 289 WMQDV 293
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 27/317 (8%)
Query: 22 SHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELL 79
S + KE A K+ P +N DR LG G FG L +++
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 80 ACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL 139
A K + K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 140 FDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDF 199
F + G ++E A IV + H +I+RDLKPEN L + ++ DF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 200 GLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESE 258
G + K R + G+P Y+APE +L + Y +D W+ GV++Y + G PPF+A+
Sbjct: 186 GFAKRVKG--RTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 259 QGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-- 311
+ + I+ G + F + S K L+R +L+ D R + H W
Sbjct: 244 IQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
Query: 312 -------QNAKKAPNVP 321
Q +AP +P
Sbjct: 300 TDWIAIYQRKVEAPFIP 316
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L ++T A K + K+K+ I+ E I++ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 92
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G ++E A IV + H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + ++ DFG + K R + G+P Y+APE +L +
Sbjct: 153 LDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 207
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 263
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 264 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 309
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 27/317 (8%)
Query: 22 SHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELL 79
S + KE A K+ P +N DR LG G FG L +++
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 80 ACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL 139
A K + K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 140 FDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDF 199
F + G ++E A IV + H +I+RDLKPEN L + ++ DF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 200 GLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESE 258
G + K R + G+P Y+APE +L + Y +D W+ GV++Y + G PPF+A+
Sbjct: 186 GFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
Query: 259 QGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-- 311
+ + I+ G + F + S K L+R +L+ D R + H W
Sbjct: 244 IQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
Query: 312 -------QNAKKAPNVP 321
Q +AP +P
Sbjct: 300 TDWIAIYQRKVEAPFIP 316
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 23/305 (7%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S +S H R A N + G KE +E +Y V LG G FG Y I
Sbjct: 5 SKINSLAHLRA-APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL 63
Query: 78 LLACKSISKRKLRTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMEL 133
+A K + K ++ ++ + R EV ++K + S ++ L + E ++ L++E
Sbjct: 64 PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 123
Query: 134 CEG-GELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKEN 191
E +LFD I RG E A + ++E V+ CH GV+HRD+K EN L N+ E
Sbjct: 124 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE- 182
Query: 192 SPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCG 249
LK IDFG K +++ G+ Y PE ++ R +G +WS G++LY ++CG
Sbjct: 183 --LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 250 VPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHP 309
PF + E I+ G + F++ VS + L+R L P R T +++ HP
Sbjct: 240 DIPFEHDEE------IIGGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 310 WLQNA 314
W+Q+
Sbjct: 290 WMQDV 294
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 23/305 (7%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S +S H R A N + G KE +E +Y V LG G FG Y I
Sbjct: 4 SKINSLAHLRA-APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL 62
Query: 78 LLACKSISKRKLRTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMEL 133
+A K + K ++ ++ + R EV ++K + S ++ L + E ++ L++E
Sbjct: 63 PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 122
Query: 134 CEG-GELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKEN 191
E +LFD I RG E A + ++E V+ CH GV+HRD+K EN L N+ E
Sbjct: 123 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE- 181
Query: 192 SPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCG 249
LK IDFG K +++ G+ Y PE ++ R +G +WS G++LY ++CG
Sbjct: 182 --LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 250 VPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHP 309
PF + E I+ G + F++ VS + L+R L P R T +++ HP
Sbjct: 239 DIPFEHDEE------IIGGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 310 WLQNA 314
W+Q+
Sbjct: 289 WMQDV 293
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 23/305 (7%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S +S H R A N + G KE +E +Y V LG G FG Y I
Sbjct: 5 SKINSLAHLRA-APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL 63
Query: 78 LLACKSISKRKLRTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMEL 133
+A K + K ++ ++ + R EV ++K + S ++ L + E ++ L++E
Sbjct: 64 PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 123
Query: 134 CEG-GELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKEN 191
E +LFD I RG E A + ++E V+ CH GV+HRD+K EN L N+ E
Sbjct: 124 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE- 182
Query: 192 SPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCG 249
LK IDFG K +++ G+ Y PE ++ R +G +WS G++LY ++CG
Sbjct: 183 --LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 250 VPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHP 309
PF + E I+ G + F++ VS + L+R L P R T +++ HP
Sbjct: 240 DIPFEHDEE------IIGGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 310 WLQNA 314
W+Q+
Sbjct: 290 WMQDV 294
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 136/279 (48%), Gaps = 25/279 (8%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI-DDVRREVAIMKH 107
+ED LV + LG G +G L ++R T E +A K + ++ AVD +++++E+ I
Sbjct: 6 VEDWDLV-QTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINAM 61
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
L + ++V + N +L +E C GGELFDRI E A ++ V
Sbjct: 62 L-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER---FSEIVGSPYYMAPE 224
H G+ HRD+KPEN L E LK DFGL+ F+ R +++ G+ Y+APE
Sbjct: 121 LHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 225 VLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKR-----DPW 277
+LKR + +D+WS G++L +L G P W + + D+K +PW
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQE-----YSDWKEKKTYLNPW 231
Query: 278 PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
+ + +L+ ++L +P R+T + + W K
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 143/284 (50%), Gaps = 27/284 (9%)
Query: 40 VLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR 99
V G PK+ +Y ++G+G G Y +D T + +A I + L+ + +
Sbjct: 13 VSVGDPKK----KYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELII 65
Query: 100 REVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTR 159
E+ +M+ KN +IV+ ++ + + +VME GG L D +V E AAV R
Sbjct: 66 NEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCR 123
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-RFSEIVGSP 218
++ ++ H + VIHRD+K +N L + +K DFG P + + S +VG+P
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSXMVGTP 180
Query: 219 YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y+MAPEV+ R YGP++DIWS G++ ++ G PP+ E+ LR L +
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-------LRALYLIATNGT 233
Query: 278 PNVSESAK------SLVRQMLEPDPKLRLTAKQVLEHPWLQNAK 315
P + K + + LE D + R +AK++L+H +L+ AK
Sbjct: 234 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAK 277
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 27/317 (8%)
Query: 22 SHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELL 79
S + KE A K+ P +N DR LG G FG L +++
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 80 ACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL 139
A K + K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 140 FDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDF 199
F + G ++E A IV + H +I+RDLKPEN L + ++ DF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 200 GLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESE 258
G + K R + G+P Y+APE +L + Y +D W+ GV++Y + G PPF+A+
Sbjct: 186 GFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 259 QGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-- 311
+ + I+ G + F + S K L+R +L+ D R + H W
Sbjct: 244 IQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
Query: 312 -------QNAKKAPNVP 321
Q +AP +P
Sbjct: 300 TDWIAIYQRKVEAPFIP 316
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 143/317 (45%), Gaps = 27/317 (8%)
Query: 22 SHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELL 79
S + KE A K+ P +N DR LG G FG L +++
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 80 ACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL 139
A K + K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 140 FDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDF 199
F + G ++E A IV + H +I+RDLKPEN L + ++ DF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 200 GLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESE 258
G + K R + G+P Y+APE +L + Y +D W+ GV++Y + G PPF+A+
Sbjct: 186 GFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 259 QGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPD-----PKLRLTAKQVLEHPWL-- 311
+ + I+ G + F + S K L+R +L+ D L+ + H W
Sbjct: 244 IQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFAT 299
Query: 312 -------QNAKKAPNVP 321
Q +AP +P
Sbjct: 300 TDWIAIYQRKVEAPFIP 316
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L +T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G ++E A IV + H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN + + +K DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 27/317 (8%)
Query: 22 SHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELL 79
S + KE A K+ P +N DR LG G FG L +++
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 80 ACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL 139
A K + K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 140 FDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDF 199
F + G ++E A IV + H +I+RDLKPEN L + ++ DF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 200 GLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESE 258
G + K R + G+P Y+APE +L + Y +D W+ GV++Y + G PPF+A+
Sbjct: 186 GFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 259 QGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-- 311
+ + I+ G + F + S K L+R +L+ D R + H W
Sbjct: 244 IQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFAT 299
Query: 312 -------QNAKKAPNVP 321
Q +AP +P
Sbjct: 300 TDWIAIYQRKVEAPFIP 316
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 146/338 (43%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDR--E 58
MGN + +E VK E A K+ P +N DR
Sbjct: 21 MGNAAAAKKGSEQESVK-----------EFLAKAKEDFLKKWETPSQNTAQLDQFDRIKT 69
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L +++ A K + K+K+ I+ E I++ + +V L+
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLE 128
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++VME GGE+F + G + E A IV + H +I+RDL
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN L + ++ DFG + K R + G+P Y+APE +L + Y +D W
Sbjct: 189 KPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWW 243
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 244 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 299
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 300 KRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 337
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 138/284 (48%), Gaps = 22/284 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDD-----VRREVAIMK 106
+Y LG G FG + +D++ + + K I K K+ I+D V E+AI+
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEGG-ELFDRIVARGHYTERAAAAVTRTIVEVV 165
+ ++++I+ + + E+ LVME G +LF I E A+ + R +V V
Sbjct: 85 RV-EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV 143
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
+IHRD+K EN + A E+ +K IDFG + + + G+ F G+ Y APEV
Sbjct: 144 GYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEV 200
Query: 226 LKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSES 283
L N GPE+++WS GV LY L+ PF E E+ V AI P VS+
Sbjct: 201 LMGNPYRGPELEMWSLGVTLYTLVFEENPF-CELEETVEAAI---------HPPYLVSKE 250
Query: 284 AKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVR 327
SLV +L+P P+ R T ++++ PW+ + +V R
Sbjct: 251 LMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFR 294
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 149/338 (44%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDR--E 58
MGN + +E VK E A K+ P +N DR
Sbjct: 21 MGNAAAAKKGSEQESVK-----------EFLAKAKEDFLKKWETPSQNTAQLDQFDRIKT 69
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L +++ A K + K+K+ I+ E I++ + +V L+
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLE 128
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++VME GGE+F + G ++E A IV + H +I+RDL
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN L + ++ DFG + K G ++ + G+P Y+APE +L + Y +D W
Sbjct: 189 KPENLLI---DQQGYIQVTDFGFAKRVK-GATWT-LCGTPEYLAPEIILSKGYNKAVDWW 243
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 244 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 299
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 300 KRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 337
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L ++T A K + K+K+ I+ E I++ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 92
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G + E A IV + H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + ++ DFG + K R + G+P Y+APE +L +
Sbjct: 153 LDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 207
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 263
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 264 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 309
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 140/311 (45%), Gaps = 27/311 (8%)
Query: 28 KEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELLACKSIS 85
KE A K+ P +N DR LG G FG L +++ A K +
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 KRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVA 145
K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+F +
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 146 RGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF 205
G ++E A IV + H +I+RDLKPEN L + ++ DFG +
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRV 191
Query: 206 KPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQA 264
K R + G+P Y+APE +L + Y +D W+ GV++Y + G PPF+A+ + +
Sbjct: 192 KG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-------- 311
I+ G + F + S K L+R +L+ D R + H W
Sbjct: 250 IVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 312 -QNAKKAPNVP 321
Q +AP +P
Sbjct: 306 YQRKVEAPFIP 316
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L +T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G ++E A IV + H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + ++ DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 148/338 (43%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIE--DRYLVDRE 58
MGN + +E VK E A K+ P +N D++ +
Sbjct: 1 MGNAAAAKKGSEQESVK-----------EFLAKAKEDFLKKWENPAQNTAHLDQFERIKT 49
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L +T A K + K+K+ I+ E I++ + +V L+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLE 108
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++VME GGE+F + G ++E A IV + H +I+RDL
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN L + ++ DFG + K R + G+P Y+APE +L + Y +D W
Sbjct: 169 KPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 279
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 141/317 (44%), Gaps = 27/317 (8%)
Query: 22 SHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELL 79
S + KE A K+ P +N DR LG G FG L +++
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 80 ACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL 139
A K + K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 140 FDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDF 199
F + G + E A IV + H +I+RDLKPEN L + ++ DF
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 200 GLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESE 258
G + K R + G+P Y+APE +L + Y +D W+ GV++Y + G PPF+A+
Sbjct: 186 GFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 259 QGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-- 311
+ + I+ G + F + S K L+R +L+ D R + H W
Sbjct: 244 IQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
Query: 312 -------QNAKKAPNVP 321
Q +AP +P
Sbjct: 300 TDWIAIYQRKVEAPFIP 316
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 141/317 (44%), Gaps = 27/317 (8%)
Query: 22 SHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELL 79
S + KE A K+ P +N DR LG G FG L +++
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 80 ACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL 139
A K + K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 140 FDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDF 199
F + G + E A IV + H +I+RDLKPEN L + ++ DF
Sbjct: 129 FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 200 GLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESE 258
G + K R + G+P Y+APE +L + Y +D W+ GV++Y + G PPF+A+
Sbjct: 186 GFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 259 QGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-- 311
+ + I+ G + F + S K L+R +L+ D R + H W
Sbjct: 244 IQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
Query: 312 -------QNAKKAPNVP 321
Q +AP +P
Sbjct: 300 TDWIAIYQRKVEAPFIP 316
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 136/294 (46%), Gaps = 23/294 (7%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D + R LG+G FG L ++T +L A K + K + D++ E I+ L +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS-LAR 81
Query: 111 NSSIVSLKEAC-EDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCH 169
N ++ C + + + VME GG+L I + E A I+ + H
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 170 KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKR 228
G+I+RDLK +N L ++ K DFG+ G + G+P Y+APE+L+
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGH---CKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQE 198
Query: 229 N-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSL 287
YGP +D W+ GV+LY +LCG PF AE+E + +AIL + + W + E A +
Sbjct: 199 MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LHEDATGI 254
Query: 288 VRQMLEPDPKLRLTA------KQVLEHP------WLQNAKKAPNVPLGDVVRSR 329
++ + +P +RL + +L HP W Q + P ++SR
Sbjct: 255 LKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSR 308
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L +T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G ++E A IV + H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + ++ DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 140/311 (45%), Gaps = 27/311 (8%)
Query: 28 KEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELLACKSIS 85
KE A K+ P +N DR LG G FG L +++ A K +
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 KRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVA 145
K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+F +
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 146 RGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF 205
G ++E A IV + H +I+RDLKPEN L + ++ DFG +
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRV 191
Query: 206 KPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQA 264
K R + G+P Y+APE +L + Y +D W+ GV++Y + G PPF+A+ + +
Sbjct: 192 KG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEK 249
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-------- 311
I+ G + F + S K L+R +L+ D R + H W
Sbjct: 250 IVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 312 -QNAKKAPNVP 321
Q +AP +P
Sbjct: 306 YQRKVEAPFIP 316
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 148/338 (43%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIE--DRYLVDRE 58
MGN + +E VK E A K+ P +N D++ +
Sbjct: 1 MGNAAAAKKGSEQESVK-----------EFLAKAKEDFLKKWENPAQNTAHLDQFERIKT 49
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L +T A K + K+K+ I+ E I++ + +V L+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLE 108
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++VME GGE+F + G ++E A IV + H +I+RDL
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN L + ++ DFG + K R + G+P Y+APE +L + Y +D W
Sbjct: 169 KPENLLI---DQQGYIQVTDFGFAKRVKG--RTWTLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 279
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + +G G FG L +T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G ++E A IV + H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + +K DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L +T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G ++E A IV + H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + ++ DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L +T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G ++E A IV + H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + ++ DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 132/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L +T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G + E A IV + H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN + + +K DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 130/261 (49%), Gaps = 16/261 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG L ++ T A K + K + ++ E ++++ ++ + +LK
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 75
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCH-KHGVIHRD 177
+ + + + VME GGELF + ++E A IV + H + V++RD
Sbjct: 76 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 135
Query: 178 LKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKRN-YGPEID 235
LK EN + ++ +K DFGL K G G+P Y+APEVL+ N YG +D
Sbjct: 136 LKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVD 192
Query: 236 IWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPD 295
W GV++Y ++CG PF+ + + + + IL I F R P AKSL+ +L+ D
Sbjct: 193 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AKSLLSGLLKKD 248
Query: 296 PKLRLT-----AKQVLEHPWL 311
PK RL AK++++H +
Sbjct: 249 PKQRLGGGSEDAKEIMQHRFF 269
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 143/284 (50%), Gaps = 27/284 (9%)
Query: 40 VLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR 99
V G PK+ +Y ++G+G G Y +D T + +A I + L+ + +
Sbjct: 14 VSVGDPKK----KYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELII 66
Query: 100 REVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTR 159
E+ +M+ KN +IV+ ++ + + +VME GG L D +V E AAV R
Sbjct: 67 NEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCR 124
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-RFSEIVGSP 218
++ ++ H + VIHRD+K +N L + +K DFG P + + S +VG+P
Sbjct: 125 ECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSXMVGTP 181
Query: 219 YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y+MAPEV+ R YGP++DIWS G++ ++ G PP+ E+ LR L +
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-------LRALYLIATNGT 234
Query: 278 PNVSESAK------SLVRQMLEPDPKLRLTAKQVLEHPWLQNAK 315
P + K + + LE D + R +AK++++H +L+ AK
Sbjct: 235 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAK 278
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKR---KLRTAVDIDDVRRE 101
PK +++D + + R LG G FG +L R A K + K +L+ +D R
Sbjct: 1 PKYSLQD-FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM 59
Query: 102 VAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTI 161
++I+ H I+ + +D + ++M+ EGGELF + + A +
Sbjct: 60 LSIVTH----PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV 115
Query: 162 VEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYM 221
++ H +I+RDLKPEN L +N +K DFG + + P + + G+P Y+
Sbjct: 116 CLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYV-PDVTYX-LCGTPDYI 170
Query: 222 APEVLK-RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV 280
APEV+ + Y ID WS G+++Y +L G PF+ + + IL + F P
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFF 226
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQ-----VLEHPWLQ 312
+E K L+ +++ D RL Q V HPW +
Sbjct: 227 NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFK 263
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 139/311 (44%), Gaps = 27/311 (8%)
Query: 28 KEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELLACKSIS 85
KE A K+ P +N DR LG G FG L +++ A K +
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 KRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVA 145
K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+F +
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 146 RGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF 205
G + E A IV + H +I+RDLKPEN L + ++ DFG +
Sbjct: 135 IGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRV 191
Query: 206 KPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQA 264
K R + G+P Y+APE +L + Y +D W+ GV++Y + G PPF+A+ + +
Sbjct: 192 KG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-------- 311
I+ G + F + S K L+R +L+ D R + H W
Sbjct: 250 IVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 312 -QNAKKAPNVP 321
Q +AP +P
Sbjct: 306 YQRKVEAPFIP 316
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L +T A K + K+K+ I+ E I++ +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 85
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G ++E A IV + H
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + ++ DFG + K R + G+P Y+APE +L +
Sbjct: 146 LDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWTLCGTPEYLAPEIILSKG 200
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 201 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 256
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 257 NLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 302
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 130/261 (49%), Gaps = 16/261 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG L ++ T A K + K + ++ E ++++ ++ + +LK
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 74
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCH-KHGVIHRD 177
+ + + + VME GGELF + ++E A IV + H + V++RD
Sbjct: 75 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 134
Query: 178 LKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKRN-YGPEID 235
LK EN + ++ +K DFGL K G G+P Y+APEVL+ N YG +D
Sbjct: 135 LKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVD 191
Query: 236 IWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPD 295
W GV++Y ++CG PF+ + + + + IL I F R P AKSL+ +L+ D
Sbjct: 192 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AKSLLSGLLKKD 247
Query: 296 PKLRLT-----AKQVLEHPWL 311
PK RL AK++++H +
Sbjct: 248 PKQRLGGGSEDAKEIMQHRFF 268
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 143/284 (50%), Gaps = 27/284 (9%)
Query: 40 VLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR 99
V G PK+ +Y ++G+G G Y +D T + +A I + L+ + +
Sbjct: 13 VSVGDPKK----KYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKELII 65
Query: 100 REVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTR 159
E+ +M+ KN +IV+ ++ + + +VME GG L D +V E AAV R
Sbjct: 66 NEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCR 123
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-RFSEIVGSP 218
++ ++ H + VIHRD+K +N L + +K DFG P + + S +VG+P
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTP 180
Query: 219 YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y+MAPEV+ R YGP++DIWS G++ ++ G PP+ E+ LR L +
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-------LRALYLIATNGT 233
Query: 278 PNVSESAK------SLVRQMLEPDPKLRLTAKQVLEHPWLQNAK 315
P + K + + L+ D + R +AK++L+H +L+ AK
Sbjct: 234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAK 277
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 139/311 (44%), Gaps = 27/311 (8%)
Query: 28 KEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELLACKSIS 85
KE A K+ P +N DR LG G FG L +++ A K +
Sbjct: 16 KEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 KRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVA 145
K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+F +
Sbjct: 76 KQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 146 RGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF 205
G + E A IV + H +I+RDLKPEN L + ++ DFG +
Sbjct: 135 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRV 191
Query: 206 KPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQA 264
K R + G+P Y+APE +L + Y +D W+ GV++Y + G PPF+A+ + +
Sbjct: 192 KG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-------- 311
I+ G + F + S K L+R +L+ D R + H W
Sbjct: 250 IVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 312 -QNAKKAPNVP 321
Q +AP +P
Sbjct: 306 YQRKVEAPFIP 316
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 129/258 (50%), Gaps = 16/258 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG L ++ T A K + K + ++ E ++++ ++ + +LK
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 76
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCH-KHGVIHRD 177
+ + + + VME GGELF + ++E A IV + H + V++RD
Sbjct: 77 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 136
Query: 178 LKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKRN-YGPEID 235
LK EN + ++ +K DFGL K G G+P Y+APEVL+ N YG +D
Sbjct: 137 LKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVD 193
Query: 236 IWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPD 295
W GV++Y ++CG PF+ + + + + IL I F R P AKSL+ +L+ D
Sbjct: 194 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AKSLLSGLLKKD 249
Query: 296 PKLRLT-----AKQVLEH 308
PK RL AK++++H
Sbjct: 250 PKQRLGGGSEDAKEIMQH 267
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 147/338 (43%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIE--DRYLVDRE 58
MGN + +E VK E A K+ P +N D++ +
Sbjct: 1 MGNAAAAKKGXEQESVK-----------EFLAKAKEDFLKKWENPAQNTAHLDQFERIKT 49
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L +T A K + K+K+ I+ E I++ + + L+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTKLE 108
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++VME GGE+F + G ++E A IV + H +I+RDL
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN + + +K DFG + K R + G+P Y+APE +L + Y +D W
Sbjct: 169 KPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 279
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L +T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G ++E A IV + H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN + + ++ DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLMI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 144/286 (50%), Gaps = 27/286 (9%)
Query: 38 ITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDD 97
I V G PK+ +Y ++G+G G Y +D T + +A I + L+ +
Sbjct: 12 IIVSVGDPKK----KYTRFEKIGQGASGTVYTAMDVATGQEVA---IRQMNLQQQPKKEL 64
Query: 98 VRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAV 157
+ E+ +M+ KN +IV+ ++ + + +VME GG L D +V E AAV
Sbjct: 65 IINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAV 122
Query: 158 TRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-RFSEIVG 216
R ++ ++ H + VIHR++K +N L + +K DFG P + + S +VG
Sbjct: 123 CRECLQALEFLHSNQVIHRNIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVG 179
Query: 217 SPYYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRD 275
+PY+MAPEV+ R YGP++DIWS G++ ++ G PP+ E+ LR L +
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-------LRALYLIATN 232
Query: 276 PWPNVSESAK------SLVRQMLEPDPKLRLTAKQVLEHPWLQNAK 315
P + K + + LE D + R +AK++++H +L+ AK
Sbjct: 233 GTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAK 278
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 139/311 (44%), Gaps = 27/311 (8%)
Query: 28 KEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELLACKSIS 85
KE A K+ P +N DR LG G FG L +++ A K +
Sbjct: 11 KEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 70
Query: 86 KRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVA 145
K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+F +
Sbjct: 71 KQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 129
Query: 146 RGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF 205
G + E A IV + H +I+RDLKPEN L + ++ DFG +
Sbjct: 130 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRV 186
Query: 206 KPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQA 264
K R + G+P Y+APE +L + Y +D W+ GV++Y + G PPF+A+ + +
Sbjct: 187 KG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 244
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-------- 311
I+ G + F + S K L+R +L+ D R + H W
Sbjct: 245 IVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 300
Query: 312 -QNAKKAPNVP 321
Q +AP +P
Sbjct: 301 YQRKVEAPFIP 311
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 147/338 (43%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIE--DRYLVDRE 58
MGN + +E VK E A K+ P +N D++ +
Sbjct: 1 MGNAAAAKKGSEQESVK-----------EFLAKAKEDFLKKWENPAQNTAHLDQFERIKT 49
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L +T A K + K+K+ I+ E I++ + + L+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTKLE 108
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++VME GGE+F + G ++E A IV + H +I+RDL
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN + + +K DFG + K R + G+P Y+APE +L + Y +D W
Sbjct: 169 KPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 279
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 147/338 (43%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIE--DRYLVDRE 58
MGN + +E VK E A K+ P +N D++ +
Sbjct: 1 MGNAAAAKKGSEQESVK-----------EFLAKAKEDFLKKWENPAQNTAHLDQFERIKT 49
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L +T A K + K+K+ I+ E I++ + +V L+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLE 108
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++VME GGE+F + G + E A IV + H +I+RDL
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN L + ++ DFG + K R + G+P Y+APE +L + Y +D W
Sbjct: 169 KPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 279
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 136/274 (49%), Gaps = 22/274 (8%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR---EVAIM 105
+E +Y V LG G FG Y I +A K + K ++ ++ + R EV ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 106 KHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIVARGHYTERAAAAVTRTIVE 163
K + S ++ L + E ++ L++E E +LFD I RG E A + ++E
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 164 VVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
V+ CH GV+HRD+K EN L N+ E LK IDFG K +++ G+ Y
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSP 177
Query: 223 PEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV 280
PE ++ R +G +WS G++LY ++CG PF + E I+RG + F++ V
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RV 227
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
S + L+R L P R T +++ HPW+Q+
Sbjct: 228 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 129/258 (50%), Gaps = 16/258 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG L ++ T A K + K + ++ E ++++ ++ + +LK
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 214
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCH-KHGVIHRD 177
+ + + + VME GGELF + ++E A IV + H + V++RD
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 274
Query: 178 LKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKRN-YGPEID 235
LK EN + ++ +K DFGL K G G+P Y+APEVL+ N YG +D
Sbjct: 275 LKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVD 331
Query: 236 IWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPD 295
W GV++Y ++CG PF+ + + + + IL I F R P AKSL+ +L+ D
Sbjct: 332 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AKSLLSGLLKKD 387
Query: 296 PKLRLT-----AKQVLEH 308
PK RL AK++++H
Sbjct: 388 PKQRLGGGSEDAKEIMQH 405
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 132/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L +T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G + E A IV + H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + ++ DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 129/258 (50%), Gaps = 16/258 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG L ++ T A K + K + ++ E ++++ ++ + +LK
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 217
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCH-KHGVIHRD 177
+ + + + VME GGELF + ++E A IV + H + V++RD
Sbjct: 218 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 277
Query: 178 LKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKRN-YGPEID 235
LK EN + ++ +K DFGL K G G+P Y+APEVL+ N YG +D
Sbjct: 278 LKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVD 334
Query: 236 IWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPD 295
W GV++Y ++CG PF+ + + + + IL I F R P AKSL+ +L+ D
Sbjct: 335 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AKSLLSGLLKKD 390
Query: 296 PKLRLT-----AKQVLEH 308
PK RL AK++++H
Sbjct: 391 PKQRLGGGSEDAKEIMQH 408
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 132/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + LG G FG L +T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GGE+F + G + E A IV + H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + ++ DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 142/317 (44%), Gaps = 27/317 (8%)
Query: 22 SHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELL 79
S + KE A K+ P +N DR LG G FG L +++
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 80 ACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL 139
A K + K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 140 FDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDF 199
F + G ++E A IV + H +I+RDLKPEN + + ++ DF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLII---DQQGYIQVTDF 185
Query: 200 GLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESE 258
G + K R + G+P Y+APE ++ + Y +D W+ GV++Y + G PPF+A+
Sbjct: 186 GFAKRVKG--RTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 259 QGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-- 311
+ + I+ G + F + S K L+R +L+ D R + H W
Sbjct: 244 IQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
Query: 312 -------QNAKKAPNVP 321
Q +AP +P
Sbjct: 300 TDWIAIYQRKVEAPFIP 316
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 136/274 (49%), Gaps = 22/274 (8%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR---EVAIM 105
+E +Y V LG G FG Y I +A K + K ++ ++ + R EV ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 106 KHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIVARGHYTERAAAAVTRTIVE 163
K + S ++ L + E ++ L++E E +LFD I RG E A + ++E
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 164 VVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
V+ CH GV+HRD+K EN L N+ E LK IDFG K +++ G+ Y
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSP 177
Query: 223 PEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV 280
PE ++ R +G +WS G++LY ++CG PF + E I+RG + F++ V
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RV 227
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
S + L+R L P R T +++ HPW+Q+
Sbjct: 228 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 141/317 (44%), Gaps = 27/317 (8%)
Query: 22 SHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELL 79
S + KE A K+ P +N DR LG G FG L +++
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 80 ACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL 139
A K + K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 140 FDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDF 199
F + G ++E A IV + H +I+RDLKPEN L + ++ DF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 200 GLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESE 258
G + K R + G+P Y+AP +L + Y +D W+ GV++Y + G PPF+A+
Sbjct: 186 GFAKRVKG--RTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 259 QGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-- 311
+ + I+ G + F + S K L+R +L+ D R + H W
Sbjct: 244 IQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
Query: 312 -------QNAKKAPNVP 321
Q +AP +P
Sbjct: 300 TDWIAIYQRKVEAPFIP 316
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 146/338 (43%), Gaps = 38/338 (11%)
Query: 1 MGNCCRSPAAVAREDVKSNYSSHDHARKEAGANKKQPITVLAGVPKENIE--DRYLVDRE 58
MGN + +E VK E A K+ P +N D++ +
Sbjct: 1 MGNAAAAKKGSEQESVK-----------EFLAKAKEDFLKKWENPAQNTAHLDQFERIKT 49
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG L +T A K + K+K+ I+ E I++ + + L+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTKLE 108
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ +D++ +++VME GGE+F + G + E A IV + H +I+RDL
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIW 237
KPEN + + +K DFG + K R + G+P Y+APE +L + Y +D W
Sbjct: 169 KPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 238 SAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPK 297
+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R +L+ D
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 279
Query: 298 LRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
R + H W Q +AP +P
Sbjct: 280 KRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 317
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + +G G FG L +T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GG++F + G ++E A IV + H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + +K DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 25/286 (8%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D++ + +G G FG L +T A K + K+K+ I+ E I++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-N 99
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L+ + +D++ +++VME GG++F + G ++E A IV + H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRN 229
+I+RDLKPEN L + +K DFG + K R + G+P Y+APE +L +
Sbjct: 160 LDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
Y +D W+ GV++Y + G PPF+A+ + + I+ G + F + S K L+R
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 290 QMLEPDPKLRL-----TAKQVLEHPWL---------QNAKKAPNVP 321
+L+ D R + H W Q +AP +P
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 125/265 (47%), Gaps = 18/265 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F T L + T A K + KR + + V RE +M L + V L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 96
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 156
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 157 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 213
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVL 269
Query: 295 DPKLRLTAKQ------VLEHPWLQN 313
D RL ++ + HP+ ++
Sbjct: 270 DATKRLGCEEMEGYGPLKAHPFFES 294
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 122/224 (54%), Gaps = 20/224 (8%)
Query: 101 EVAIMKHLPKNSSIVSLKEACED--DNAVHLVMELCEGGELFDRIVA----RGHYTERAA 154
EV +++ L K+ +IV + D + +++VME CEGG+L I R + E
Sbjct: 55 EVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 155 AAVTRTIVEVVQLCHK-----HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
V + ++ CH+ H V+HRDLKP N +F + K+N +K DFGL+ E
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDE 170
Query: 210 RFS-EIVGSPYYMAPEVLKR-NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR 267
F+ E VG+PYYM+PE + R +Y + DIWS G +LY L +PPF A S++ +A I
Sbjct: 171 DFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
Query: 268 GLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
G F+R P+ S+ ++ +ML R + +++LE+P +
Sbjct: 231 G--KFRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 108 bits (271), Expect = 6e-24, Method: Composition-based stats.
Identities = 55/148 (37%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Query: 347 IAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNG 406
+A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 KGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
GT+D+ EFL ++ ++ ++E + +AF FDKDGNG+I ELR + G +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 466 VANDIFQEVDTDKDGLISYDEFVAMMKT 493
+++ +E D D DG ++Y+EFV MM T
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTT 148
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 141/317 (44%), Gaps = 27/317 (8%)
Query: 22 SHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDR--ELGRGEFGVTYLCIDRDTRELL 79
S + KE A K+ P +N DR LG G FG L +++
Sbjct: 10 SEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHY 69
Query: 80 ACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL 139
A K + K+K+ I+ E I++ + +V L+ + +D++ +++VME GGE+
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128
Query: 140 FDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDF 199
F + G ++E A IV + H +I+RDLKPEN L + ++ DF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185
Query: 200 GLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESE 258
G + K R + G+P +APE +L + Y +D W+ GV++Y + G PPF+A+
Sbjct: 186 GFAKRVKG--RTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 259 QGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHPWL-- 311
+ + I+ G + F + S K L+R +L+ D R + H W
Sbjct: 244 IQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
Query: 312 -------QNAKKAPNVP 321
Q +AP +P
Sbjct: 300 TDWIAIYQRKVEAPFIP 316
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 141/279 (50%), Gaps = 15/279 (5%)
Query: 38 ITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDD 97
+ V G P+E + + ++G G G+ + ++ T + +A K + RK + +
Sbjct: 36 LVVSPGDPREYLANFI----KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR---EL 88
Query: 98 VRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAV 157
+ EV IM+ + ++V + + + + +VME EGG L D IV E A V
Sbjct: 89 LFNEVVIMRDY-HHDNVVDMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATV 146
Query: 158 TRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGL-SIFFKPGERFSEIVG 216
+++ + H GVIHRD+K ++ L + + +K DFG + K + +VG
Sbjct: 147 CLSVLRALSYLHNQGVIHRDIKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKXLVG 203
Query: 217 SPYYMAPEVLKR-NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRD 275
+PY+MAPEV+ R YG E+DIWS G+++ ++ G PP++ E + I L +D
Sbjct: 204 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKD 263
Query: 276 PWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
VS + + ML +P R TA+++L HP+L+ A
Sbjct: 264 -LHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLKLA 301
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 150/289 (51%), Gaps = 26/289 (8%)
Query: 52 RYLVDR--ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
R L+D ++G G G+ L ++ + +A K + RK + + + EV IM+
Sbjct: 44 RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR---ELLFNEVVIMRDY- 99
Query: 110 KNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCH 169
++ ++V + ++ + ++ME +GG L D IV++ E A V +++ + H
Sbjct: 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLH 158
Query: 170 KHGVIHRDLKPENFLFANKKENSPLKAIDFGL-SIFFKPGERFSEIVGSPYYMAPEVLKR 228
GVIHRD+K ++ L + +K DFG + K + +VG+PY+MAPEV+ R
Sbjct: 159 AQGVIHRDIKSDSILLTL---DGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISR 215
Query: 229 N-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK-- 285
+ Y E+DIWS G+++ ++ G PP++++S QA+ R + P P + S K
Sbjct: 216 SLYATEVDIWSLGIMVIEMVDGEPPYFSDSP---VQAMKR----LRDSPPPKLKNSHKVS 268
Query: 286 ----SLVRQMLEPDPKLRLTAKQVLEHPW-LQNAKKAPNVPLGDVVRSR 329
+ +ML DP+ R TA+++L+HP+ LQ VPL + R +
Sbjct: 269 PVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVPLIQLYRKQ 317
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 88/153 (57%), Gaps = 1/153 (0%)
Query: 340 KRKALRVIAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLI 399
K K + L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I
Sbjct: 285 KTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 344
Query: 400 EAVDTNGKGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMED 458
VD +G GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR +
Sbjct: 345 NEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 404
Query: 459 GADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
G + +++ +E D D DG ++Y+EFV MM
Sbjct: 405 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 437
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 107 bits (268), Expect = 1e-23, Method: Composition-based stats.
Identities = 55/146 (37%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
Query: 347 IAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNG 406
+A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 KGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 466 VANDIFQEVDTDKDGLISYDEFVAMM 491
+ + +E D D DG ++Y+EFV MM
Sbjct: 121 EVDQMIREADIDGDGQVNYEEFVQMM 146
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 139/275 (50%), Gaps = 24/275 (8%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y V + +GRG FG L + ++++ A K +SK ++ D E IM +
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 135
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
+V L A +DD +++VME GG+L + +++ E+ A T +V + H G
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE----RFSEIVGSPYYMAPEVLKR 228
+IHRD+KP+N L ++ LK DFG + K E VG+P Y++PEVLK
Sbjct: 195 LIHRDVKPDNMLL---DKHGHLKLADFGTCM--KMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 229 N-----YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAIL--RGLIDFKRDPWPNVS 281
YG E D WS GV L+ +L G PF+A+S G I+ + + F D +S
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED--AEIS 307
Query: 282 ESAKSLVRQMLEPDPKLRL---TAKQVLEHPWLQN 313
+ AK+L+ L D ++RL +++ +HP+ +N
Sbjct: 308 KHAKNLICAFLT-DREVRLGRNGVEEIKQHPFFKN 341
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 12/251 (4%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 95
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 155
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 156 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS 212
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVL 268
Query: 295 DPKLRLTAKQV 305
D RL +++
Sbjct: 269 DATKRLGCEEM 279
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 130/280 (46%), Gaps = 18/280 (6%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P++ + + + LG G F L + T A K + KR + + V RE +
Sbjct: 1 PRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV 60
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEV 164
M L + V L +DD ++ + + GEL I G + E T IV
Sbjct: 61 MSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 119
Query: 165 VQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYM 221
++ H G+IHRDLKPEN L E+ ++ DFG + P R + VG+ Y+
Sbjct: 120 LEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 222 APEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV 280
+PE+L +++ D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK- 235
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQ------VLEHPWLQNA 314
A+ LV ++L D RL ++ + HP+ ++
Sbjct: 236 ---ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 272
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 96
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 156
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 157 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 213
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVL 269
Query: 295 DPKLRLTAKQ------VLEHPWLQN 313
D RL ++ + HP+ ++
Sbjct: 270 DATKRLGCEEMEGYGPLKAHPFFES 294
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 88/146 (60%), Gaps = 1/146 (0%)
Query: 347 IAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNG 406
+A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 KGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 466 VANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG ++Y+EFV MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 135/274 (49%), Gaps = 22/274 (8%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR---EVAIM 105
+E +Y V LG G FG Y I +A K + K ++ ++ + R EV ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 106 KHLPKN-SSIVSLKEACEDDNAVHLVMELCEG-GELFDRIVARGHYTERAAAAVTRTIVE 163
K + S ++ L + E ++ L++E E +LFD I RG E A + ++E
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 164 VVQLCHKHGVIHRDLKPENFLF-ANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
V+ CH GV+HRD+K EN L N+ E LK IDFG K +++ G+ Y
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLK-DTVYTDFDGTRVYSP 177
Query: 223 PEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV 280
PE ++ R +G +WS G++LY ++CG PF + E I+ G + F++ V
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RV 227
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
S + L+R L P R T +++ HPW+Q+
Sbjct: 228 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 96
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 156
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 157 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 213
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVL 269
Query: 295 DPKLRLTAKQ------VLEHPWLQN 313
D RL ++ + HP+ ++
Sbjct: 270 DATKRLGCEEMEGYGPLKAHPFFES 294
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 425
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 426 MIREADIDGDGQVNYEEFVQMM 447
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 159 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVL 271
Query: 295 DPKLRLTAKQ------VLEHPWLQN 313
D RL ++ + HP+ ++
Sbjct: 272 DATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 12/251 (4%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 95
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 155
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 156 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 212
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVL 268
Query: 295 DPKLRLTAKQV 305
D RL +++
Sbjct: 269 DATKRLGCEEM 279
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 424 MIREADIDGDGQVNYEEFVQMM 445
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 130/280 (46%), Gaps = 18/280 (6%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P++ + + + LG G F L + T A K + KR + + V RE +
Sbjct: 2 PRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV 61
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEV 164
M L + V L +DD ++ + + GEL I G + E T IV
Sbjct: 62 MSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 120
Query: 165 VQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYM 221
++ H G+IHRDLKPEN L E+ ++ DFG + P R + VG+ Y+
Sbjct: 121 LEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 222 APEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV 280
+PE+L +++ D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK- 236
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQ------VLEHPWLQNA 314
A+ LV ++L D RL ++ + HP+ ++
Sbjct: 237 ---ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 107 bits (266), Expect = 2e-23, Method: Composition-based stats.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 99
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 159
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 160 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS 216
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVL 272
Query: 295 DPKLRLTAKQ------VLEHPWLQN 313
D RL ++ + HP+ ++
Sbjct: 273 DATKRLGCEEMEGYGPLKAHPFFES 297
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 130/280 (46%), Gaps = 18/280 (6%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P++ + + + LG G F L + T A K + KR + + V RE +
Sbjct: 4 PRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV 63
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEV 164
M L + V L +DD ++ + + GEL I G + E T IV
Sbjct: 64 MSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 122
Query: 165 VQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYM 221
++ H G+IHRDLKPEN L E+ ++ DFG + P R + VG+ Y+
Sbjct: 123 LEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 222 APEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV 280
+PE+L +++ D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK- 238
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQ------VLEHPWLQNA 314
A+ LV ++L D RL ++ + HP+ ++
Sbjct: 239 ---ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 275
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 130/280 (46%), Gaps = 18/280 (6%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P++ + + + LG G F L + T A K + KR + + V RE +
Sbjct: 3 PRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV 62
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEV 164
M L + V L +DD ++ + + GEL I G + E T IV
Sbjct: 63 MSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 121
Query: 165 VQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYM 221
++ H G+IHRDLKPEN L E+ ++ DFG + P R + VG+ Y+
Sbjct: 122 LEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 222 APEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV 280
+PE+L +++ D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK- 237
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQ------VLEHPWLQNA 314
A+ LV ++L D RL ++ + HP+ ++
Sbjct: 238 ---ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 274
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 159 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVL 271
Query: 295 DPKLRLTAKQ------VLEHPWLQN 313
D RL ++ + HP+ ++
Sbjct: 272 DATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 424 MIREADIDGDGQVNYEEFVQMM 445
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 159 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVL 271
Query: 295 DPKLRLTAKQ------VLEHPWLQN 313
D RL ++ + HP+ ++
Sbjct: 272 DATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 18/266 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 80
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 81 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 140
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 141 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 197
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 198 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVL 253
Query: 295 DPKLRLTAKQ------VLEHPWLQNA 314
D RL ++ + HP+ ++
Sbjct: 254 DATKRLGCEEMEGYGPLKAHPFFESV 279
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 96
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 156
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 157 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSS 213
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVL 269
Query: 295 DPKLRLTAKQ------VLEHPWLQN 313
D RL ++ + HP+ ++
Sbjct: 270 DATKRLGCEEMEGYGPLKAHPFFES 294
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 131/292 (44%), Gaps = 38/292 (13%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
++Y ++G G +GV Y + E A K I K + +R E++I+K L K
Sbjct: 2 EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKEL-K 58
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEG--GELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
+S+IV L + + LV E + +L D V G A + ++ + C
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVL- 226
H V+HRDLKP+N L + E LK DFGL+ F P +++ V + +Y AP+VL
Sbjct: 117 HDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 227 -KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---- 281
+ Y IDIWS G I ++ G P F SE I R L WPNV+
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 282 ---------------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
ES L+ +ML+ DP R+TAKQ LEH + +
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 391 MIREADIDGDGQVNYEEFVQMM 412
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 99
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 159
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 160 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 216
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVL 272
Query: 295 DPKLRLTAKQ------VLEHPWLQN 313
D RL ++ + HP+ ++
Sbjct: 273 DATKRLGCEEMEGYGPLKAHPFFES 297
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 391 MIREADIDGDGQVNYEEFVQMM 412
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 387
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 388 MIREADIDGDGQVNYEEFVQMM 409
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 103
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 163
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 164 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 220
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 221 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVL 276
Query: 295 DPKLRLTAKQ------VLEHPWLQN 313
D RL ++ + HP+ ++
Sbjct: 277 DATKRLGCEEMEGYGPLKAHPFFES 301
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 106 bits (265), Expect = 3e-23, Method: Composition-based stats.
Identities = 52/138 (37%), Positives = 81/138 (58%)
Query: 354 EEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYG 413
E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+D+
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 414 EFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQE 473
EFL ++ + + E + +AF FDKDGNGYI ELR + G + +++ +E
Sbjct: 63 EFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 122
Query: 474 VDTDKDGLISYDEFVAMM 491
+ D DG ++Y+EFV MM
Sbjct: 123 ANIDGDGQVNYEEFVQMM 140
Score = 49.3 bits (116), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 344 LRVIAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVD 403
L ++A + + E+I+E F+ D D +G +S EL+ + N G +L + EV +I +
Sbjct: 65 LTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAN 124
Query: 404 TNGKGTLDYGEFLAVL 419
+G G ++Y EF+ ++
Sbjct: 125 IDGDGQVNYEEFVQMM 140
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 424 MIREADIDGDGQVNYEEFVQMM 445
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 131/292 (44%), Gaps = 38/292 (13%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
++Y ++G G +GV Y + E A K I K + +R E++I+K L K
Sbjct: 2 EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKEL-K 58
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEG--GELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
+S+IV L + + LV E + +L D V G A + ++ + C
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVL- 226
H V+HRDLKP+N L + E LK DFGL+ F P +++ V + +Y AP+VL
Sbjct: 117 HDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 227 -KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---- 281
+ Y IDIWS G I ++ G P F SE I R L WPNV+
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 282 ---------------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
ES L+ +ML+ DP R+TAKQ LEH + +
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 131/292 (44%), Gaps = 38/292 (13%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
++Y ++G G +GV Y + E A K I K + +R E++I+K L K
Sbjct: 2 EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKEL-K 58
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEG--GELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
+S+IV L + + LV E + +L D V G A + ++ + C
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVL- 226
H V+HRDLKP+N L + E LK DFGL+ F P +++ + + +Y AP+VL
Sbjct: 117 HDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLM 173
Query: 227 -KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---- 281
+ Y IDIWS G I ++ G P F SE I R L WPNV+
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 282 ---------------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
ES L+ +ML+ DP R+TAKQ LEH + +
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 132/304 (43%), Gaps = 34/304 (11%)
Query: 41 LAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR 100
++ P DRY +LG G +G Y ID T E +A K I V +R
Sbjct: 24 VSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR- 82
Query: 101 EVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
EV+++K L ++ +I+ LK ++ +HL+ E E +L + + R +
Sbjct: 83 EVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQ 140
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLF--ANKKENSPLKAIDFGLS-IFFKPGERFSEIVGS 217
++ V CH +HRDLKP+N L ++ E LK DFGL+ F P +F+ + +
Sbjct: 141 LINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIIT 200
Query: 218 PYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRD 275
+Y PE+L R+Y +DIWS I +L P F +SE I L
Sbjct: 201 LWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDT 260
Query: 276 PWPNVSE-----------SAKSLVR---------------QMLEPDPKLRLTAKQVLEHP 309
WP V+ K+L R MLE DP R++AK LEHP
Sbjct: 261 TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHP 320
Query: 310 WLQN 313
+ +
Sbjct: 321 YFSH 324
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 101
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 102 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 161
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 162 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 218
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPK----ARDLVEKLLVL 274
Query: 295 DPKLRLTAKQ------VLEHPWLQN 313
D RL ++ + HP+ ++
Sbjct: 275 DATKRLGCEEMEGYGPLKAHPFFES 299
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 346 VIAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTN 405
+A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 406 GKGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCT 464
G GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 122
Query: 465 DVANDIFQEVDTDKDGLISYDEFVAMM 491
+ +++ +E D D DG ++Y+EFV MM
Sbjct: 123 EEVDEMIREADIDGDGQVNYEEFVQMM 149
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 88/146 (60%), Gaps = 1/146 (0%)
Query: 347 IAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNG 406
+A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 407 KGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G +
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 121
Query: 466 VANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG ++Y+EFV MM
Sbjct: 122 EVDEMIREADIDGDGQVNYEEFVQMM 147
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 121/224 (54%), Gaps = 20/224 (8%)
Query: 101 EVAIMKHLPKNSSIVSLKEACED--DNAVHLVMELCEGGELFDRIVA----RGHYTERAA 154
EV +++ L K+ +IV + D + +++VME CEGG+L I R + E
Sbjct: 55 EVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 155 AAVTRTIVEVVQLCHK-----HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
V + ++ CH+ H V+HRDLKP N +F + K+N +K DFGL+
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDT 170
Query: 210 RFSE-IVGSPYYMAPEVLKR-NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR 267
F++ VG+PYYM+PE + R +Y + DIWS G +LY L +PPF A S++ +A I
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
Query: 268 GLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
G F+R P+ S+ ++ +ML R + +++LE+P +
Sbjct: 231 G--KFRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 88/146 (60%), Gaps = 1/146 (0%)
Query: 347 IAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNG 406
+A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 KGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 466 VANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG ++Y+EFV MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 88/146 (60%), Gaps = 1/146 (0%)
Query: 347 IAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNG 406
+A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 KGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 466 VANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG ++Y+EFV MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 133/268 (49%), Gaps = 19/268 (7%)
Query: 57 RELGRGEFGVTYLC---IDRDTRELLACKSISKRKL-RTAVDIDDVRREVAIMKHLPKNS 112
R LG+G +G + +T ++ A K + K + R A D + E I++ + K+
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHP 81
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
IV L A + ++L++E GGELF ++ G + E A I + H+ G
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKRN-Y 230
+I+RDLKPEN + ++ +K DFGL G G+ YMAPE+L R+ +
Sbjct: 142 IIYRDLKPENIMLNHQGH---VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
+D WS G ++Y +L G PPF E+ + IL+ ++ P +++ A+ L+++
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKK 254
Query: 291 MLEPDPKLRLT-----AKQVLEHPWLQN 313
+L+ + RL A +V HP+ ++
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPFFRH 282
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 124/262 (47%), Gaps = 13/262 (4%)
Query: 45 PKENIEDRYLVDRE----LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR 100
P N++ L D LG+G FG L + T EL A K + K + D++
Sbjct: 9 PSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMV 68
Query: 101 EVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
E ++ L K + L + + ++ VME GG+L I G + E A
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAE 128
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPY 219
I + HK G+I+RDLK +N + ++ +K DFG+ G E G+P
Sbjct: 129 ISIGLFFLHKRGIIYRDLKLDNVMLDSEGH---IKIADFGMCKEHMMDGVTTREFCGTPD 185
Query: 220 YMAPEVLK-RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
Y+APE++ + YG +D W+ GV+LY +L G PPF E E + Q+I+ + + +
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK---- 241
Query: 279 NVSESAKSLVRQMLEPDPKLRL 300
++S+ A S+ + ++ P RL
Sbjct: 242 SLSKEAVSICKGLMTKHPAKRL 263
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 121/224 (54%), Gaps = 20/224 (8%)
Query: 101 EVAIMKHLPKNSSIVSLKEACED--DNAVHLVMELCEGGELFDRIVA----RGHYTERAA 154
EV +++ L K+ +IV + D + +++VME CEGG+L I R + E
Sbjct: 55 EVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 155 AAVTRTIVEVVQLCHK-----HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
V + ++ CH+ H V+HRDLKP N +F + K+N +K DFGL+
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDT 170
Query: 210 RFSE-IVGSPYYMAPEVLKR-NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR 267
F++ VG+PYYM+PE + R +Y + DIWS G +LY L +PPF A S++ +A I
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 230
Query: 268 GLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
G F+R P+ S+ ++ +ML R + +++LE+P +
Sbjct: 231 G--KFRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 88/146 (60%), Gaps = 1/146 (0%)
Query: 347 IAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNG 406
+A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 KGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 466 VANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG ++Y+EFV MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 133/268 (49%), Gaps = 19/268 (7%)
Query: 57 RELGRGEFGVTYLC---IDRDTRELLACKSISKRKL-RTAVDIDDVRREVAIMKHLPKNS 112
R LG+G +G + +T ++ A K + K + R A D + E I++ + K+
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHP 81
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
IV L A + ++L++E GGELF ++ G + E A I + H+ G
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLKRN-Y 230
+I+RDLKPEN + ++ +K DFGL G G+ YMAPE+L R+ +
Sbjct: 142 IIYRDLKPENIMLNHQGH---VKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 231 GPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQ 290
+D WS G ++Y +L G PPF E+ + IL+ ++ P +++ A+ L+++
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKK 254
Query: 291 MLEPDPKLRLT-----AKQVLEHPWLQN 313
+L+ + RL A +V HP+ ++
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPFFRH 282
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G +
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 126
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG ++Y+EFV MM
Sbjct: 127 VDEMIREADIDGDGQVNYEEFVQMM 151
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
AE L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL+++ ++ ++E L +AF FD+DGNG I ELR + G D
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG I+Y+EFV MM
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMM 145
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E++ E FK D D +G++S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 142
Query: 417 AVLL 420
+++
Sbjct: 143 RMMV 146
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG ++Y+EFV MM
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G +
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 121
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG ++Y+EFV MM
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG ++Y+EFV MM
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG ++Y+EFV MM
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Query: 347 IAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNG 406
+A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 KGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
GT+D+ EFL ++ ++ ++E + +AF FDKDGNG+I ELR + G +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 466 VANDIFQEVDTDKDGLISYDEFVAMMKT 493
+++ +E D D DG ++Y+EFV MM +
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTS 148
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 159 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSS 215
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + I++ DF +P A+ LV ++L
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----ARDLVEKLLVL 271
Query: 295 DPKLRLTAKQ------VLEHPWLQN 313
D RL ++ + HP+ ++
Sbjct: 272 DATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG ++Y+EFV MM
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + G L I G + E T IV ++ H G+IHRDL
Sbjct: 99 FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 159 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSS 215
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + Q I++ DF +P A+ LV ++L
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEKLLVL 271
Query: 295 DPKLRLTAKQ------VLEHPWLQN 313
D RL ++ + HP+ ++
Sbjct: 272 DATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 121 MIREADIDGDGQVNYEEFVQMM 142
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 89/147 (60%), Gaps = 3/147 (2%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVLLHLRRMAN-DEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL ++ R+M + +E + +AF FDKDGNG+I ELR + G +
Sbjct: 61 GTIDFPEFLTMM--ARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 118
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMMKT 493
+++ +E D D DG ++Y+EFV MM +
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVTMMTS 145
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G F L + T A K + KR + + V RE +M L + V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLY 98
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+DD ++ + + GEL I G + E T IV ++ H G+IHRDL
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 158
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERFSEIVGSPYYMAPEVL-KRNYGPEI 234
KPEN L E+ ++ DFG + P R + VG+ Y++PE+L +++
Sbjct: 159 KPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D+W+ G I+Y L+ G+PPF A +E + I++ DF +P A+ LV ++L
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----ARDLVEKLLVL 271
Query: 295 DPKLRLTAKQ------VLEHPWLQN 313
D RL ++ + HP+ ++
Sbjct: 272 DATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + ++
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 122
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV MM
Sbjct: 123 MIREADIDGDGQVNYEEFVQMM 144
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL ++ ++ ++E + +AF FDKDGNG+I ELR + G +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMMKT 493
+++ +E D D DG ++Y+EFV MM +
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMTS 147
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Query: 347 IAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNG 406
+A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 KGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
GT+D+ EFL ++ ++ ++E + +AF FDKDGNG+I ELR + G +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 466 VANDIFQEVDTDKDGLISYDEFVAMMKT 493
+++ +E D D DG ++Y+EFV MM +
Sbjct: 121 EVDEMIRESDIDGDGQVNYEEFVTMMTS 148
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL ++ ++ ++E + +AF FDKDGNG+I ELR + G +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG ++Y+EFV MM
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL+++ ++ ++E L +AF FD+DGNG I ELR + G D
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG I+Y+EFV MM
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMM 145
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E++ E FK D D +G++S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 142
Query: 417 AVLL 420
+++
Sbjct: 143 RMMV 146
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G +
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E + D DG ++Y+EFV MM
Sbjct: 121 VDEMIREANIDGDGQVNYEEFVQMM 145
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Query: 354 EEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYG 413
E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+D+
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 414 EFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQ 472
EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + +++ +
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 124
Query: 473 EVDTDKDGLISYDEFVAMM 491
E D D DG ++Y+EFV MM
Sbjct: 125 EADIDGDGQVNYEEFVQMM 143
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 136/289 (47%), Gaps = 32/289 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D Y + +G G V +E +A K I+ K +T+ +D++ +E+ M
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQC-H 71
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFD---RIVARGHYT-----ERAAAAVTRTIV 162
+ +IVS + + + LVM+L GG + D IVA+G + E A + R ++
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE------IVG 216
E ++ HK+G IHRD+K N L E+ ++ DFG+S F G + VG
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 217 SPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------- 267
+P +MAPEV++ R Y + DIWS G+ L G P+ V L+
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 248
Query: 268 -GLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAK 315
G+ D ++ +S + ++ L+ DP+ R TA ++L H + Q AK
Sbjct: 249 TGVQD--KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Query: 354 EEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYG 413
E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+D+
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 414 EFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQ 472
EFL ++ ++ ++E + +AF FDKDGNGYI ELR + G + +++ +
Sbjct: 63 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 122
Query: 473 EVDTDKDGLISYDEFVAMM 491
E D D DG ++Y+EFV MM
Sbjct: 123 EADIDGDGQVNYEEFVQMM 141
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 32/298 (10%)
Query: 42 AGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRRE 101
+ +P D Y + +G G V +E +A K I+ K +T+ +D++ +E
Sbjct: 1 SALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKE 58
Query: 102 VAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFD---RIVARGHYT-----ERA 153
+ M + +IVS + + + LVM+L GG + D IVA+G + E
Sbjct: 59 IQAMSQC-HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 154 AAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE 213
A + R ++E ++ HK+G IHRD+K N L E+ ++ DFG+S F G +
Sbjct: 118 IATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITR 174
Query: 214 ------IVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAI 265
VG+P +MAPEV++ R Y + DIWS G+ L G P+ V
Sbjct: 175 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT 234
Query: 266 LR--------GLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAK 315
L+ G+ D ++ +S + ++ L+ DP+ R TA ++L H + Q AK
Sbjct: 235 LQNDPPSLETGVQD--KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 290
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 160/378 (42%), Gaps = 93/378 (24%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
+Y + ++LG+G +G+ + IDR T E++A K I + + D RE+ I+ L +
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD-AFQNSTDAQRTFREIMILTELSGH 68
Query: 112 SSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERA-AAAVTRTIVEVVQLC 168
+IV+L DN V+LV + E V R + E V +++V++
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMETDL---HAVIRANILEPVHKQYVVYQLIKVIKYL 125
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER------------------ 210
H G++HRD+KP N L +K DFGLS F R
Sbjct: 126 HSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182
Query: 211 ----FSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQA 264
++ V + +Y APE+L Y ID+WS G IL +LCG P F S +
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER 242
Query: 265 ILRGLIDF-------------------------------KRD---PWPNV---------- 280
I+ G+IDF KRD W N+
Sbjct: 243 II-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADC 301
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQVLEHPWL---QNAKKAPN------VPLGDVVRSRLK 331
+E A L+ ++L+ +P R++A L+HP++ N + PN +P+ D V+ +
Sbjct: 302 NEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHIITIPINDNVKHSID 361
Query: 332 Q-----FSMMNRFKRKAL 344
+S ++R KR+ +
Sbjct: 362 DYRNLVYSEISRRKRELI 379
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 23/305 (7%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S +S H R A N + G KE +E +Y V LG G G Y I
Sbjct: 19 SKINSLAHLRA-APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGSGSVYSGIRVSDNL 77
Query: 78 LLACKSISKRKLRTAVDIDDVRR---EVAIMKHLPKN-SSIVSLKEACEDDNAVHLVMEL 133
+A K + K ++ ++ + R EV ++K + S ++ L + E ++ L++E
Sbjct: 78 PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER 137
Query: 134 CEG-GELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLF-ANKKEN 191
E +LFD I RG E A + ++E V+ CH GV+HRD+K EN L N+ E
Sbjct: 138 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE- 196
Query: 192 SPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK--RNYGPEIDIWSAGVILYILLCG 249
LK IDFG K +++ G+ Y PE ++ R +G +WS G++LY ++CG
Sbjct: 197 --LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Query: 250 VPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHP 309
PF + E I+RG + F++ VS + L+R L P R T +++ HP
Sbjct: 254 DIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHP 303
Query: 310 WLQNA 314
W+Q+
Sbjct: 304 WMQDV 308
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL ++ ++ ++E L +AF FDKDGNG+I ELR + G +
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG ++Y+EFV +M
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVM 145
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E++KE F+ D D +G +S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 83 EELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFV 142
Query: 417 AVLL 420
V++
Sbjct: 143 QVMM 146
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL ++ ++ ++E L +AF FDKDGNG+I ELR + G +
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG ++Y+EFV +M
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVM 145
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E +KE F+ D D +G +S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 83 EKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFV 142
Query: 417 AVLL 420
V++
Sbjct: 143 QVMM 146
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ ++ ++E L +AF FDKDGNG+I ELR + G + ++
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG ++Y+EFV +M
Sbjct: 121 MIREADVDGDGQVNYEEFVQVM 142
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E++KE F+ D D +G +S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 80 EELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFV 139
Query: 417 AVLL 420
V++
Sbjct: 140 QVMM 143
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 9/247 (3%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
+G+G FG L + A K + K+ + + + E ++ K+ +V L
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ + + ++ V++ GGELF + + E A I + H +++RDL
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDL 165
Query: 179 KPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVL-KRNYGPEIDI 236
KPEN L ++ + DFGL + S G+P Y+APEVL K+ Y +D
Sbjct: 166 KPENILLDSQGH---IVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDW 222
Query: 237 WSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDP 296
W G +LY +L G+PPF++ + + IL + K PN++ SA+ L+ +L+ D
Sbjct: 223 WCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDR 278
Query: 297 KLRLTAK 303
RL AK
Sbjct: 279 TKRLGAK 285
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 24/275 (8%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVS 116
R +GRG + L + T + A K + K + DID V+ E + + + +V
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 117 LKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHR 176
L + ++ + V+E GG+L + + E A + I + H+ G+I+R
Sbjct: 86 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 145
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLK-RNYGPEI 234
DLK +N L ++ +K D+G+ +PG+ S G+P Y+APE+L+ +YG +
Sbjct: 146 DLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSV 202
Query: 235 DIWSAGVILYILLCGVPPF---------WAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
D W+ GV+++ ++ G PF +E + Q IL I R ++S A
Sbjct: 203 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SMSVKAA 258
Query: 286 SLVRQMLEPDPKLRLTA------KQVLEHPWLQNA 314
S+++ L DPK RL + HP+ +N
Sbjct: 259 SVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNV 293
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 24/275 (8%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVS 116
R +GRG + L + T + A K + K + DID V+ E + + + +V
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 117 LKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHR 176
L + ++ + V+E GG+L + + E A + I + H+ G+I+R
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 130
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLK-RNYGPEI 234
DLK +N L ++ +K D+G+ +PG+ S G+P Y+APE+L+ +YG +
Sbjct: 131 DLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSV 187
Query: 235 DIWSAGVILYILLCGVPPF---------WAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
D W+ GV+++ ++ G PF +E + Q IL I R ++S A
Sbjct: 188 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAA 243
Query: 286 SLVRQMLEPDPKLRLTAK------QVLEHPWLQNA 314
S+++ L DPK RL + HP+ +N
Sbjct: 244 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 278
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 24/275 (8%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVS 116
R +GRG + L + T + A K + K + DID V+ E + + + +V
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 117 LKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHR 176
L + ++ + V+E GG+L + + E A + I + H+ G+I+R
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 134
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLK-RNYGPEI 234
DLK +N L ++ +K D+G+ +PG+ S G+P Y+APE+L+ +YG +
Sbjct: 135 DLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSV 191
Query: 235 DIWSAGVILYILLCGVPPF---------WAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
D W+ GV+++ ++ G PF +E + Q IL I R ++S A
Sbjct: 192 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAA 247
Query: 286 SLVRQMLEPDPKLRLTAK------QVLEHPWLQNA 314
S+++ L DPK RL + HP+ +N
Sbjct: 248 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 128/269 (47%), Gaps = 22/269 (8%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G +G+ Y D + +A K I +R R + + E+A+ KHL K+ +IV
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS---QPLHEEIALHKHL-KHKNIVQYL 85
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHY-----TERAAAAVTRTIVEVVQLCHKHGV 173
+ ++ + + ME GG L + R + E+ T+ I+E ++ H + +
Sbjct: 86 GSFSENGFIKIFMEQVPGGSL--SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE-IVGSPYYMAPEVL---KRN 229
+HRD+K +N L + LK DFG S +E G+ YMAPE++ R
Sbjct: 144 VHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG 201
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW--PNVSESAKSL 287
YG DIWS G + + G PPF+ E G QA + + FK P ++S AK+
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPFY---ELGEPQAAMFKVGMFKVHPEIPESMSAEAKAF 258
Query: 288 VRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
+ + EPDP R A +L +L+ + K
Sbjct: 259 ILKCFEPDPDKRACANDLLVDEFLKVSSK 287
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
Query: 347 IAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNG 406
+A+ L+ +++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 KGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
GT+D+ EFL ++ ++ ++E L +AF FDKD NG+I ELR + G +
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 466 VANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG I+YDEFV +M
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVM 146
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E++KE F+ D D +G +S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 84 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFV 143
Query: 417 AVLL 420
V++
Sbjct: 144 KVMM 147
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 143/274 (52%), Gaps = 30/274 (10%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
++Y+ +++G G FG L + K I+ ++ ++ + ++ RREVA++ ++ K
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANM-K 81
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE-VVQLC- 168
+ +IV +E+ E++ ++++VM+ CEGG+LF RI A ++ I++ VQ+C
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINA-----QKGVLFQEDQILDWFVQICL 136
Query: 169 -----HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMA 222
H ++HRD+K +N ++ ++ DFG++ + E +G+PYY++
Sbjct: 137 ALKHVHDRKILHRDIKSQNIFLT---KDGTVQLGDFGIARVLNSTVELARACIGTPYYLS 193
Query: 223 PEVLK-RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV- 280
PE+ + + Y + DIW+ G +LY L F A S + + I+ G +P V
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG-------SFPPVS 246
Query: 281 ---SESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
S +SLV Q+ + +P+ R + +LE ++
Sbjct: 247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 22/253 (8%)
Query: 59 LGRGEFGVTYLC---IDRDTRELLACKSISKRKLRTAVDIDDVR----REVAIMKHLPKN 111
LG+G FG +L D R+L A K + K L+ D VR R++ + + P
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR---DRVRTKMERDILVEVNHP-- 86
Query: 112 SSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
IV L A + + ++L+++ GG+LF R+ +TE + + H
Sbjct: 87 -FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFS-EIVGSPYYMAPEVL-KRN 229
G+I+RDLKPEN L E +K DFGLS E+ + G+ YMAPEV+ +R
Sbjct: 146 GIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
+ D WS GV+++ +L G PF + + IL+ + + +S A+SL+R
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLR 258
Query: 290 QMLEPDPKLRLTA 302
+ + +P RL A
Sbjct: 259 MLFKRNPANRLGA 271
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 22/253 (8%)
Query: 59 LGRGEFGVTYLC---IDRDTRELLACKSISKRKLRTAVDIDDVR----REVAIMKHLPKN 111
LG+G FG +L D R+L A K + K L+ D VR R++ + + P
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR---DRVRTKMERDILVEVNHP-- 87
Query: 112 SSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
IV L A + + ++L+++ GG+LF R+ +TE + + H
Sbjct: 88 -FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 146
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFS-EIVGSPYYMAPEVL-KRN 229
G+I+RDLKPEN L E +K DFGLS E+ + G+ YMAPEV+ +R
Sbjct: 147 GIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG 203
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
+ D WS GV+++ +L G PF + + IL+ + + +S A+SL+R
Sbjct: 204 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLR 259
Query: 290 QMLEPDPKLRLTA 302
+ + +P RL A
Sbjct: 260 MLFKRNPANRLGA 272
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 13/257 (5%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D + + R +G+G FG + DT+++ A K ++K+K ++ +V +E+ IM+ L +
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-E 73
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
+ +V+L + +D+ + +V++L GG+L + H+ E +V +
Sbjct: 74 HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN 133
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKR-- 228
+IHRD+KP+N L E+ + DF ++ + + + G+ YMAPE+
Sbjct: 134 QRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRK 190
Query: 229 --NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAI--LRGLIDFKRDPWPNVSESA 284
Y +D WS GV Y LL G P+ S + + + W S+
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW---SQEM 247
Query: 285 KSLVRQMLEPDPKLRLT 301
SL++++LEP+P R +
Sbjct: 248 VSLLKKLLEPNPDQRFS 264
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 24/275 (8%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVS 116
R +GRG + L + T + A + + K + DID V+ E + + + +V
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 117 LKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHR 176
L + ++ + V+E GG+L + + E A + I + H+ G+I+R
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 177
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLK-RNYGPEI 234
DLK +N L ++ +K D+G+ +PG+ S G+P Y+APE+L+ +YG +
Sbjct: 178 DLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 234
Query: 235 DIWSAGVILYILLCGVPPF---------WAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
D W+ GV+++ ++ G PF +E + Q IL I R ++S A
Sbjct: 235 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAA 290
Query: 286 SLVRQMLEPDPKLRLTAK------QVLEHPWLQNA 314
S+++ L DPK RL + HP+ +N
Sbjct: 291 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 85/147 (57%), Gaps = 1/147 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ LS E++ D KE F D D DG ++ +EL +R+ E E+Q +I VD +G
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 408 GTLDYGEFLAVLL-HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+++ EFL+++ ++ +E L +AF FDKD NGYI +ELR ++ G +
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMMKT 493
+ +E D D DG ++Y+EFV MM T
Sbjct: 121 VEQMIKEADLDGDGQVNYEEFVKMMMT 147
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E++KE FK D D +G +S EL+ + N G +L + EV+ +I+ D +G G ++Y EF+
Sbjct: 83 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 142
Query: 417 AVLLHLR 423
+++ +R
Sbjct: 143 KMMMTVR 149
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 22/253 (8%)
Query: 59 LGRGEFGVTYLC---IDRDTRELLACKSISKRKLRTAVDIDDVR----REVAIMKHLPKN 111
LG+G FG +L D R+L A K + K L+ D VR R++ + + P
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR---DRVRTKMERDILVEVNHP-- 86
Query: 112 SSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
IV L A + + ++L+++ GG+LF R+ +TE + + H
Sbjct: 87 -FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFS-EIVGSPYYMAPEVL-KRN 229
G+I+RDLKPEN L E +K DFGLS E+ + G+ YMAPEV+ +R
Sbjct: 146 GIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVR 289
+ D WS GV+++ +L G PF + + IL+ + + +S A+SL+R
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLR 258
Query: 290 QMLEPDPKLRLTA 302
+ + +P RL A
Sbjct: 259 MLFKRNPANRLGA 271
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 67
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 68 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVL--KRNYG 231
HRDLKP+N L + +K DFGL+ F P ++ V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYS 182
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 132/300 (44%), Gaps = 60/300 (20%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR-REVAIMKHLPKNSSIVS 116
+LG G + Y +++ T +A K + KL + RE+++MK L K+ +IV
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEV---KLDSEEGTPSTAIREISLMKEL-KHENIVR 67
Query: 117 LKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTR------------TIVEV 164
L + +N + LV E + + + R R +++
Sbjct: 68 LYDVIHTENKLTLVFEFMDND-------LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 165 VQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAP 223
+ CH++ ++HRDLKP+N L + + LK DFGL+ F P FS V + +Y AP
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVVTLWYRAP 177
Query: 224 EVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS 281
+VL R Y IDIWS G IL ++ G P F +++ + I + WP+V+
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237
Query: 282 ESAKSL----------VRQMLEP--------------------DPKLRLTAKQVLEHPWL 311
+ K +RQ+L+P +P +RL+AKQ L HPW
Sbjct: 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 74
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 75 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 132
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVL--KRNYG 231
HRDLKP+N L + +K DFGL+ F P ++ V + +Y APE+L + Y
Sbjct: 133 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYS 189
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 190 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 249
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 250 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 68
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 69 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 127 HRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 126/265 (47%), Gaps = 22/265 (8%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G +G+ Y D + +A K I +R R + + E+A+ KHL K+ +IV
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS---QPLHEEIALHKHL-KHKNIVQYL 71
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHY-----TERAAAAVTRTIVEVVQLCHKHGV 173
+ ++ + + ME GG L + R + E+ T+ I+E ++ H + +
Sbjct: 72 GSFSENGFIKIFMEQVPGGSL--SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE-IVGSPYYMAPEVL---KRN 229
+HRD+K +N L + LK DFG S +E G+ YMAPE++ R
Sbjct: 130 VHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG 187
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW--PNVSESAKSL 287
YG DIWS G + + G PPF+ E G QA + + FK P ++S AK+
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPPFY---ELGEPQAAMFKVGMFKVHPEIPESMSAEAKAF 244
Query: 288 VRQMLEPDPKLRLTAKQVLEHPWLQ 312
+ + EPDP R A +L +L+
Sbjct: 245 ILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 69
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 70 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 128 HRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 68
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 69 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P ++ V + +Y APE+L + Y
Sbjct: 127 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 183
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 67
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 68 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P ++ V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 130/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 67
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E +L D + A T + + +++Q CH H V+
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKDFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 126 HRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 71
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 72 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 129
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P ++ V + +Y APE+L + Y
Sbjct: 130 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 186
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 246
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 247 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 66
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 67 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P ++ V + +Y APE+L + Y
Sbjct: 125 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 67
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 68 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P ++ V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 66
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 67 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P ++ V + +Y APE+L + Y
Sbjct: 125 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 67
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 68 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVL 125
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P ++ V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 74
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 75 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 132
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P ++ V + +Y APE+L + Y
Sbjct: 133 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 189
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 190 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 249
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 250 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 68
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + T + + +++Q CH H V+
Sbjct: 69 LDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 127 HRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 131/286 (45%), Gaps = 24/286 (8%)
Query: 46 KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDD---VRREV 102
+E E Y + LG+G FG + R +A K I + ++ + D EV
Sbjct: 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEV 85
Query: 103 AIMKHLPK---NSSIVSLKEACEDDNAVHLVME-LCEGGELFDRIVARGHYTERAAAAVT 158
A++ + + ++ L + E LV+E +LFD I +G E +
Sbjct: 86 ALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFF 145
Query: 159 RTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSP 218
+V +Q CH GV+HRD+K EN L ++ + K IDFG E +++ G+
Sbjct: 146 GQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCA--KLIDFGSGALLH-DEPYTDFDGTR 202
Query: 219 YYMAPEVLKRN--YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDP 276
Y PE + R+ + +WS G++LY ++CG PF + E IL + F
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPA-- 254
Query: 277 WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
+VS +L+R+ L P P R + +++L PW+Q A +VPL
Sbjct: 255 --HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT--PAEDVPL 296
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 70
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + T + + +++Q CH H V+
Sbjct: 71 LDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKPEN L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 129 HRDLKPENLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 68
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 69 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 127 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 68
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 69 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 127 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 244 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 70
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 71 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 129 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
Query: 347 IAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNG 406
+A+ L+ +++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 407 KGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
GT+D+ EFL ++ ++ ++E L +AF FDKD NG+I ELR + G +
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 466 VANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +E D D DG I+Y+EFV +M
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVM 146
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E++KE F+ D D +G +S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 84 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
Query: 417 AVLL 420
V++
Sbjct: 144 KVMM 147
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 67
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 68 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 70
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 71 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 129 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 69
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 70 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 128 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 66
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 67 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 125 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 67
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 68 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 67
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 68 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 69
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 70 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 128 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 121/258 (46%), Gaps = 15/258 (5%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I +RY + +LG G YL D +A K+I + REV L
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC 168
+ +IVS+ + E+D+ +LVME EG L + I + G + A T I++ ++
Sbjct: 69 -SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE--RFSEIVGSPYYMAPEVL 226
H ++HRD+KP+N L + N LK DFG++ + + ++G+ Y +PE
Sbjct: 128 HDMRIVHRDIKPQNILIDS---NKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 227 KRNYGPE-IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK 285
K E DI+S G++LY +L G PPF E+ +A I +D PNV+ +
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-------IKHIQDSVPNVTTDVR 237
Query: 286 SLVRQMLEPDPKLRLTAK 303
+ Q L + LR T K
Sbjct: 238 KDIPQSLS-NVILRATEK 254
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 71
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 72 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 129
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 130 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 186
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 246
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 247 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 66
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 67 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 125 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E+V + KE F D D DG ++T EL +R+ G E+E++ ++ +D +G
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL ++ ++ N+E + +AF FDKDGNG++ ELR + G +
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFVAMM 491
+++ + DTD DG ++Y+EFV ++
Sbjct: 121 VDEMIRAADTDGDGQVNYEEFVRVL 145
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E+I+E F+ D D +G VS EL+ + G +L++ EV +I A DT+G G ++Y EF+
Sbjct: 83 EEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFV 142
Query: 417 AVLL 420
VL+
Sbjct: 143 RVLV 146
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 130/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 69
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E +L D + A T + + +++Q CH H V+
Sbjct: 70 LDVIHTENKLYLVFEFL-SMDLKDFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 128 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 130/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 70
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E +L D + A T + + +++Q CH H V+
Sbjct: 71 LDVIHTENKLYLVFEFL-SMDLKDFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 129 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 70
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + + T + + +++Q CH H V+
Sbjct: 71 LDVIHTENKLYLVFEHVD--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 129 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 30/288 (10%)
Query: 34 KKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAV 93
++QP+T +N +Y R LG+G FG C R T ++ ACK + K++++
Sbjct: 177 ERQPVT-------KNTFRQY---RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK 226
Query: 94 DIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERA 153
E I++ + + +VSL A E +A+ LV+ L GG+L I G +A
Sbjct: 227 GEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG----QA 281
Query: 154 AAAVTRTIVEVVQLC------HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKP 207
R + ++C H+ +++RDLKPEN L ++ ++ D GL++
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPE 338
Query: 208 GERFSEIVGSPYYMAPEVLK-RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAIL 266
G+ VG+ YMAPEV+K Y D W+ G +LY ++ G PF ++ + +
Sbjct: 339 GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE 398
Query: 267 RGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHP 309
R + + + S A+SL Q+L DP RL +A++V EHP
Sbjct: 399 RLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 127/290 (43%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 70
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + T + + +++Q CH H V+
Sbjct: 71 LDVIHTENKLYLVFEFLH--QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 129 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A I V +R E++++K L + +IV L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 67
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 68 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P ++ V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A I V +R E++++K L + +IV L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 66
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 67 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P ++ V + +Y APE+L + Y
Sbjct: 125 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 67
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ---LCHKHGVI 174
+ +N ++LV E + + + T + + +++Q CH H V+
Sbjct: 68 LDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYG 231
HRDLKP+N L + +K DFGL+ F P + V + +Y APE+L + Y
Sbjct: 126 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS---------- 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 282 ---------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
E +SL+ QML DP R++AK L HP+ Q+
Sbjct: 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 30/288 (10%)
Query: 34 KKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAV 93
++QP+T +N +Y R LG+G FG C R T ++ ACK + K++++
Sbjct: 177 ERQPVT-------KNTFRQY---RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK 226
Query: 94 DIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERA 153
E I++ + + +VSL A E +A+ LV+ L GG+L I G +A
Sbjct: 227 GEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG----QA 281
Query: 154 AAAVTRTIVEVVQLC------HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKP 207
R + ++C H+ +++RDLKPEN L ++ ++ D GL++
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPE 338
Query: 208 GERFSEIVGSPYYMAPEVLK-RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAIL 266
G+ VG+ YMAPEV+K Y D W+ G +LY ++ G PF ++ + +
Sbjct: 339 GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE 398
Query: 267 RGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL-----TAKQVLEHP 309
R + + + S A+SL Q+L DP RL +A++V EHP
Sbjct: 399 RLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 129/288 (44%), Gaps = 34/288 (11%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G G +GV Y ++ T E++A K I V +R E++++K L + +IV L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL-NHPNIVKL 66
Query: 118 KEACEDDNAVHLVME-LCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHR 176
+ +N ++LV E + + + F A + +++ + CH H V+HR
Sbjct: 67 LDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 177 DLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK--RNYGPE 233
DLKP+N L + +K DFGL+ F P ++ V + +Y APE+L + Y
Sbjct: 127 DLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 234 IDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVS------------ 281
+DIWS G I ++ F +SE I R L WP V+
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 282 -------------ESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
E +SL+ QML DP R++AK L HP+ Q+ K
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 35/284 (12%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
+G G +G+ C ++DT ++A K + V RE+ ++K L ++ ++V+L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVK-KIAMREIKLLKQL-RHENLVNLL 90
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
E C+ +LV E + L D + + I+ + CH H +IHRD+
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDI 150
Query: 179 KPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLKRN--YGPEID 235
KPEN L + ++ +K DFG + PGE + + V + +Y APE+L + YG +D
Sbjct: 151 KPENILVS---QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVD 207
Query: 236 IWSAGVILYILLCGVPPFWAESEQGVAQAILRGLID--------FKRDP----------- 276
+W+ G ++ + G P F +S+ I+ L + F ++P
Sbjct: 208 VWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIK 267
Query: 277 --------WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
+P +SE L ++ L DP R ++L H + Q
Sbjct: 268 EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 134/275 (48%), Gaps = 25/275 (9%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
E+ + V +LG G +G Y I ++T +++A K + D+ ++ +E++IM+
Sbjct: 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP-----VESDLQEIIKEISIMQQC- 81
Query: 110 KNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH-YTERAAAAVTRTIVEVVQLC 168
+ +V + + + +VME C G + D I R TE A + ++ ++ ++
Sbjct: 82 DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYL 141
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVLK 227
H IHRD+K N L + K DFG++ + + ++G+P++MAPEV++
Sbjct: 142 HFMRKIHRDIKAGNILLNTEGHA---KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQ 198
Query: 228 R-NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV------ 280
Y DIWS G+ + G PP+ A+ +R + +P P
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGKPPY-ADIHP------MRAIFMIPTNPPPTFRKPELW 251
Query: 281 SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAK 315
S++ V+Q L P+ R TA Q+L+HP++++AK
Sbjct: 252 SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK 286
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 142/337 (42%), Gaps = 64/337 (18%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKR-----KLRTAVDIDDVRREV 102
NI + + LG G +GV + T E++A K I LRT RE+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-------REI 60
Query: 103 AIMKHLPKNSSIVSL-----KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAV 157
I+KH K+ +I+++ ++ E+ N V+++ EL + R+++ ++
Sbjct: 61 KILKHF-KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYF 117
Query: 158 TRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---------KPG 208
+ V++ H VIHRDLKP N L N LK DFGL+ G
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 209 ER--FSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAES------- 257
++ +E V + +Y APEV+ Y +D+WS G IL L P F
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
Query: 258 -----------------EQGVAQAILRGLIDFKRDP----WPNVSESAKSLVRQMLEPDP 296
E A+ ++ L + P +P V+ L+++ML DP
Sbjct: 235 IFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP 294
Query: 297 KLRLTAKQVLEHPWLQNAKKAPNVPLGDVVRSRLKQF 333
R+TAK+ LEHP+LQ + P G+ + +F
Sbjct: 295 AKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEF 331
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 142/337 (42%), Gaps = 64/337 (18%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKR-----KLRTAVDIDDVRREV 102
NI + + LG G +GV + T E++A K I LRT RE+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-------REI 60
Query: 103 AIMKHLPKNSSIVSL-----KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAV 157
I+KH K+ +I+++ ++ E+ N V+++ EL + R+++ ++
Sbjct: 61 KILKHF-KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYF 117
Query: 158 TRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---------KPG 208
+ V++ H VIHRDLKP N L N LK DFGL+ G
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 209 ER--FSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAES------- 257
++ +E V + +Y APEV+ Y +D+WS G IL L P F
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
Query: 258 -----------------EQGVAQAILRGLIDFKRDP----WPNVSESAKSLVRQMLEPDP 296
E A+ ++ L + P +P V+ L+++ML DP
Sbjct: 235 IFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP 294
Query: 297 KLRLTAKQVLEHPWLQNAKKAPNVPLGDVVRSRLKQF 333
R+TAK+ LEHP+LQ + P G+ + +F
Sbjct: 295 AKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEF 331
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 145/309 (46%), Gaps = 21/309 (6%)
Query: 29 EAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRK 88
E NK++P + K IED + + + LG+G FG +L + T + A K++ K
Sbjct: 1 EPELNKERPSLQI----KLKIED-FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDV 55
Query: 89 LRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH 148
+ D++ E ++ ++ + + + + VME GG+L I +
Sbjct: 56 VLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK 115
Query: 149 YTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPG 208
+ A I+ +Q H G+++RDLK +N L ++ +K DFG+ G
Sbjct: 116 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLG 172
Query: 209 E-RFSEIVGSPYYMAPEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAIL 266
+ + +E G+P Y+APE+L + Y +D WS GV+LY +L G PF + E+ + +I
Sbjct: 173 DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 232
Query: 267 RGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAK-QVLEHP------WLQNAKKAPN 319
+ R W + + AK L+ ++ +P+ RL + + +HP W + +K +
Sbjct: 233 MDNPFYPR--W--LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEID 288
Query: 320 VPLGDVVRS 328
P V+S
Sbjct: 289 PPFRPKVKS 297
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 142/337 (42%), Gaps = 64/337 (18%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKR-----KLRTAVDIDDVRREV 102
NI + + LG G +GV + T E++A K I LRT RE+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-------REI 60
Query: 103 AIMKHLPKNSSIVSL-----KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAV 157
I+KH K+ +I+++ ++ E+ N V+++ EL + R+++ ++
Sbjct: 61 KILKHF-KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYF 117
Query: 158 TRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF--------KPGE 209
+ V++ H VIHRDLKP N L N LK DFGL+ +P
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 210 RFS---EIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAES------- 257
+ S E V + +Y APEV+ Y +D+WS G IL L P F
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
Query: 258 -----------------EQGVAQAILRGLIDFKRDP----WPNVSESAKSLVRQMLEPDP 296
E A+ ++ L + P +P V+ L+++ML DP
Sbjct: 235 IFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP 294
Query: 297 KLRLTAKQVLEHPWLQNAKKAPNVPLGDVVRSRLKQF 333
R+TAK+ LEHP+LQ + P G+ + +F
Sbjct: 295 AKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEF 331
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 94.4 bits (233), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/142 (33%), Positives = 82/142 (57%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + K+ F + D + G ++T EL +R G E+E+Q LI + N G L
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 411 DYGEFLAVLL-HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
++ EF ++ +R +E + +AF FD+DG+G+I P ELR ++ G + ++
Sbjct: 64 NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDE 123
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D D DG+I+Y+EFV M+
Sbjct: 124 MIREADFDGDGMINYEEFVWMI 145
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 94.4 bits (233), Expect = 1e-19, Method: Composition-based stats.
Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL R+ G E+E+Q I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL + ++E + +AF FDKDGNGYI ELR G +
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFV 488
++ +E D D DG ++Y+EFV
Sbjct: 121 VDEXIREADIDGDGQVNYEEFV 142
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 144/305 (47%), Gaps = 21/305 (6%)
Query: 33 NKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTA 92
NK++P + K IED +++ + LG+G FG +L + T + A K++ K +
Sbjct: 4 NKERPSLQI----KLKIED-FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD 58
Query: 93 VDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTER 152
D++ E ++ ++ + + + + VME GG+L I + +
Sbjct: 59 DDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS 118
Query: 153 AAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-RF 211
A I+ +Q H G+++RDLK +N L ++ +K DFG+ G+ +
Sbjct: 119 RATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKT 175
Query: 212 SEIVGSPYYMAPEVL-KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLI 270
+ G+P Y+APE+L + Y +D WS GV+LY +L G PF + E+ + +I
Sbjct: 176 NXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP 235
Query: 271 DFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAK-QVLEHP------WLQNAKKAPNVPLG 323
+ R W + + AK L+ ++ +P+ RL + + +HP W + +K + P
Sbjct: 236 FYPR--W--LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFR 291
Query: 324 DVVRS 328
V+S
Sbjct: 292 PKVKS 296
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 82/142 (57%), Gaps = 1/142 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T +L +R+ G E+E+Q +I V +G GT+
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTI 364
Query: 411 DYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ +FL ++ ++ ++E + +AF F KDGNGYI +LR + G + ++
Sbjct: 365 DFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDE 424
Query: 470 IFQEVDTDKDGLISYDEFVAMM 491
+ +E D DG ++Y++FV MM
Sbjct: 425 MIREAGIDGDGQVNYEQFVQMM 446
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 93.6 bits (231), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL R+ G E+E+Q I VD +G
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+D+ EFL + ++E + +AF FDKDGNGYI ELR G +
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 121
Query: 467 ANDIFQEVDTDKDGLISYDEFV 488
+ +E D D DG ++Y+EFV
Sbjct: 122 VDQXIREADIDGDGQVNYEEFV 143
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 93.6 bits (231), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL R+ G E+E+Q I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 408 GTLDYGEFLAVLLHLRR-MANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV 466
GT+++ EFL + ++E + +AF FDKDGNGYI ELR G +
Sbjct: 61 GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEE 120
Query: 467 ANDIFQEVDTDKDGLISYDEFV 488
++ +E D D DG ++Y+EFV
Sbjct: 121 VDEXIREADIDGDGQVNYEEFV 142
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 122/247 (49%), Gaps = 20/247 (8%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
+GRG FG + ++ ++ A K ++K ++ + R E ++ + + I +L
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSKWITTLH 140
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVA-RGHYTERAAAAVTRTIVEVVQLCHKHGVIHRD 177
A +DDN ++LVM+ GG+L + E A +V + H+ +HRD
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRD 200
Query: 178 LKPENFLFANKKENSPLKAIDFG--LSIFFKPGERFSEIVGSPYYMAPEVL------KRN 229
+KP+N L N ++ DFG L + + S VG+P Y++PE+L K
Sbjct: 201 IKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGR 257
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP----NVSESAK 285
YGPE D WS GV +Y +L G PF+AES I+ F+ +P +VSE+AK
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---FPTQVTDVSENAK 314
Query: 286 SLVRQML 292
L+R+++
Sbjct: 315 DLIRRLI 321
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 128/275 (46%), Gaps = 34/275 (12%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL- 117
+G G +G Y T +L A K + T + +++++E+ ++K + +I +
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDV----TGDEEEEIKQEINMLKKYSHHRNIATYY 87
Query: 118 -----KEACEDDNAVHLVMELCEGGELFDRIVARGHYT--ERAAAAVTRTIVEVVQLCHK 170
K D+ + LVME C G + D I T E A + R I+ + H+
Sbjct: 88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 147
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF-KPGERFSEIVGSPYYMAPEVLKRN 229
H VIHRD+K +N L EN+ +K +DFG+S + R + +G+PY+MAPEV+ +
Sbjct: 148 HKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 204
Query: 230 YGPEI------DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV--- 280
P+ D+WS G+ + G PP +R L R+P P +
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMAEGAPPL-------CDMHPMRALFLIPRNPAPRLKSK 257
Query: 281 --SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
S+ +S + L + R +Q+++HP++++
Sbjct: 258 KWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 50/293 (17%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDD------VRREVAIMKHLPKN 111
++G G +G + +R+T E++A K R +D DD RE+ ++K L K+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALK-------RVRLDDDDEGVPSSALREICLLKEL-KH 60
Query: 112 SSIVSLKEACEDDNAVHLVMELCEGG--ELFDRIVARGHYTERAAAAVTRTIVEVVQLCH 169
+IV L + D + LV E C+ + FD G + +++ + CH
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 170 KHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVL-- 226
V+HRDLKP+N L N LK DFGL+ F P +S V + +Y P+VL
Sbjct: 119 SRNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-QGVAQAILRGLIDFKRDPWPNVSE--- 282
+ Y ID+WSAG I L P + ++ + I R L + WP++++
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235
Query: 283 ----------------------SAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
+ + L++ +L+ +P R++A++ L+HP+ +
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 50/293 (17%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDD------VRREVAIMKHLPKN 111
++G G +G + +R+T E++A K R +D DD RE+ ++K L K+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALK-------RVRLDDDDEGVPSSALREICLLKEL-KH 60
Query: 112 SSIVSLKEACEDDNAVHLVMELCEGG--ELFDRIVARGHYTERAAAAVTRTIVEVVQLCH 169
+IV L + D + LV E C+ + FD G + +++ + CH
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 170 KHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAPEVL-- 226
V+HRDLKP+N L N LK +FGL+ F P +S V + +Y P+VL
Sbjct: 119 SRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 227 KRNYGPEIDIWSAGVILYILL-CGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSE--- 282
+ Y ID+WSAG I L G P F + I R L + WP++++
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235
Query: 283 ----------------------SAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
+ + L++ +L+ +P R++A++ L+HP+ +
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 22/282 (7%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
N ED + + ELG G FG Y +++T L A K I + + +++D E+ I+
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS 90
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH--YTERAAAAVTRTIVEVV 165
+ +IV L +A +N + +++E C GG + D ++ TE V + ++ +
Sbjct: 91 C-DHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPE 224
H + +IHRDLK N LF + +K DFG+S + +R +G+PY+MAPE
Sbjct: 149 NYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE 205
Query: 225 VL------KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDP-- 276
V+ R Y + D+WS G+ L + PP + V I + P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 265
Query: 277 WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAP 318
W S + K +++ LE + R T Q+L+HP++ P
Sbjct: 266 W---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 22/282 (7%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
N ED + + ELG G FG Y +++T L A K I + + +++D E+ I+
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS 90
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH--YTERAAAAVTRTIVEVV 165
+ +IV L +A +N + +++E C GG + D ++ TE V + ++ +
Sbjct: 91 C-DHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPE 224
H + +IHRDLK N LF + +K DFG+S + +R +G+PY+MAPE
Sbjct: 149 NYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPE 205
Query: 225 VL------KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDP-- 276
V+ R Y + D+WS G+ L + PP + V I + P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 265
Query: 277 WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAP 318
W S + K +++ LE + R T Q+L+HP++ P
Sbjct: 266 W---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 16/278 (5%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVS 116
RE+G G FG Y D E++A K +S ++ D+ +EV ++ L ++ + +
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQ 118
Query: 117 LKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHR 176
+ ++ LVME C G V + E AAVT ++ + H H +IHR
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL----KRNYGP 232
D+K N L + E +K DFG + P F VG+PY+MAPEV+ + Y
Sbjct: 179 DVKAGNILLS---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDG 232
Query: 233 EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRG-LIDFKRDPWPNVSESAKSLVRQM 291
++D+WS G+ L PP + + I + + W SE ++ V
Sbjct: 233 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSC 289
Query: 292 LEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVRSR 329
L+ P+ R T++ +L+H ++ ++ P V + + R++
Sbjct: 290 LQKIPQDRPTSEVLLKHRFVLR-ERPPTVIMDLIQRTK 326
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 22/282 (7%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
N ED + + ELG G FG Y +++T L A K I + + +++D E+ I+
Sbjct: 34 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS 90
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH--YTERAAAAVTRTIVEVV 165
+ +IV L +A +N + +++E C GG + D ++ TE V + ++ +
Sbjct: 91 C-DHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDAL 148
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPE 224
H + +IHRDLK N LF + +K DFG+S + +R +G+PY+MAPE
Sbjct: 149 NYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPE 205
Query: 225 VL------KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDP-- 276
V+ R Y + D+WS G+ L + PP + V I + P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 265
Query: 277 WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAP 318
W S + K +++ LE + R T Q+L+HP++ P
Sbjct: 266 W---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 319 NVPLGDVVRSRLKQFSMMNRFKRKALRVIAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDE 378
+V L + LK F N K+ AL +IA+ L E+ +++ +F +D DN G +S+ E
Sbjct: 19 HVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQE 78
Query: 379 LKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYF 438
+ GL+ G Q ++ ++ +D+N G + Y +FLA + + E F +F
Sbjct: 79 ILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFF 138
Query: 439 DKDGNGYIEPNELRDALMEDGADD-CTDVAND-IFQEVDTDKDGLISYDEFVAMM 491
D DGNG I EL+ D ++ D A D + QEVD + DG I + EF+ MM
Sbjct: 139 DIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 16/278 (5%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVS 116
RE+G G FG Y D E++A K +S ++ D+ +EV ++ L ++ + +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQ 79
Query: 117 LKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHR 176
+ ++ LVME C G V + E AAVT ++ + H H +IHR
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL----KRNYGP 232
D+K N L + E +K DFG + P F VG+PY+MAPEV+ + Y
Sbjct: 140 DVKAGNILLS---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDG 193
Query: 233 EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRG-LIDFKRDPWPNVSESAKSLVRQM 291
++D+WS G+ L PP + + I + + W SE ++ V
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSC 250
Query: 292 LEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVRSR 329
L+ P+ R T++ +L+H ++ ++ P V + + R++
Sbjct: 251 LQKIPQDRPTSEVLLKHRFVLR-ERPPTVIMDLIQRTK 287
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 21/282 (7%)
Query: 28 KEAGANKKQPIT--VLAGVPKENIEDRYLVDRELGRGEFGVTYLC--IDR-DTRELLACK 82
K+ G K+ IT V AG K + L+ + LG+G FG +L + R D+ L A K
Sbjct: 4 KDEGVLKEISITHHVKAGSEKADPSHFELL-KVLGQGSFGKVFLVRKVTRPDSGHLYAMK 62
Query: 83 SISKR--KLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELF 140
+ K K+R V R +A + H +V L A + + ++L+++ GG+LF
Sbjct: 63 VLKKATLKVRDRVRTKMERDILADVNH----PFVVKLHYAFQTEGKLYLILDFLRGGDLF 118
Query: 141 DRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFG 200
R+ +TE + + H G+I+RDLKPEN L E +K DFG
Sbjct: 119 TRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFG 175
Query: 201 LSIFFKPGERFS-EIVGSPYYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESE 258
LS E+ + G+ YMAPEV+ R + D WS GV+++ +L G PF +
Sbjct: 176 LSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDR 235
Query: 259 QGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRL 300
+ IL+ + + +S A+SL+R + + +P RL
Sbjct: 236 KETMTLILKAKLGMPQ----FLSTEAQSLLRALFKRNPANRL 273
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 142/346 (41%), Gaps = 77/346 (22%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSI--SKRKLRTAVDIDDVRRE 101
VP +++ RY V + +G+G FG D + +A K + KR R A + E
Sbjct: 90 VPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE------E 143
Query: 102 VAIMKHLPKNS-----SIVSLKEACEDDNAVHLVMELCEGG--ELFDRIVARGHYTERAA 154
+ I++HL K +++ + E N + + EL EL + +G ++
Sbjct: 144 IRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLV 202
Query: 155 AAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+I++ + HK+ +IH DLKPEN L ++ S +K IDFG S + +R
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILL-KQQGRSGIKVIDFGSSCY--EHQRVYTX 259
Query: 215 VGSPYYMAPEV-LKRNYGPEIDIWSAGVILYILLCGVP--PFWAESEQGVAQAILRGLID 271
+ S +Y APEV L YG ID+WS G IL LL G P P E +Q L G+
Sbjct: 260 IQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPS 319
Query: 272 FK-------------------------------------------RDP-----WPNVSES 283
K R P W N +
Sbjct: 320 QKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379
Query: 284 AKS-----LVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGD 324
++Q LE DP +R+T Q L HPWL+ ++ P P G+
Sbjct: 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR--RRLPKPPTGE 423
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 142/288 (49%), Gaps = 22/288 (7%)
Query: 40 VLAGVP-----KENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVD 94
V +G+P K + E+ + ++G+G FG + ID T++++A K I + ++
Sbjct: 6 VQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE 65
Query: 95 IDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAA 154
D+++E+ ++ + + + D + ++ME GG D ++ G E
Sbjct: 66 --DIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQI 121
Query: 155 AAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-RFSE 213
A + R I++ + H IHRD+K N L + E+ +K DFG++ + + +
Sbjct: 122 ATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNX 178
Query: 214 IVGSPYYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDF 272
VG+P++MAPEV+K++ Y + DIWS G+ L G PP SE + + LI
Sbjct: 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP---HSELHPMKVLF--LIPK 233
Query: 273 KRDPW--PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPW-LQNAKKA 317
P N S+ K V L +P R TAK++L+H + L+NAKK
Sbjct: 234 NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKT 281
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 123/261 (47%), Gaps = 16/261 (6%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
N + +++++GRG+F Y +A K + L A D +E+ ++K
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE-VVQ 166
L + +++ + +DN +++V+EL + G+L R++ H+ ++ RT+ + VQ
Sbjct: 89 L-NHPNVIKYYASFIEDNELNIVLELADAGDL-SRMIK--HFKKQKRLIPERTVWKYFVQ 144
Query: 167 LC------HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE-IVGSPY 219
LC H V+HRD+KP N +K D GL FF + +VG+PY
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY 201
Query: 220 YMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
YM+PE + N Y + DIWS G +LY + PF+ + + D+ P
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSD 261
Query: 279 NVSESAKSLVRQMLEPDPKLR 299
+ SE + LV + PDP+ R
Sbjct: 262 HYSEELRQLVNMCINPDPEKR 282
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + +++G G + ++ + +++ A K ++ + +D R E+A + L ++S
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 113 -SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
I+ L + D +++VME C +L + + + + ++E V H+H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF---SEIVGSPYYMAPEVLK- 227
G++H DLKP NFL + LK IDFG++ +P VG+ YM PE +K
Sbjct: 175 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 228 ----RNYG-------PEIDIWSAGVILYILLCGVPPFWAESEQGVAQ-AILRGLIDFKRD 275
R G P+ D+WS G ILY + G PF +Q + Q + L +ID +
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----QQIINQISKLHAIIDPNHE 286
Query: 276 -PWPNVSES-AKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
+P++ E + +++ L+ DPK R++ ++L HP++Q
Sbjct: 287 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + +++G G + ++ + +++ A K ++ + +D R E+A + L ++S
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 113 -SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
I+ L + D +++VME C +L + + + + ++E V H+H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF---SEIVGSPYYMAPEVLK- 227
G++H DLKP NFL + LK IDFG++ +P VG+ YM PE +K
Sbjct: 175 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230
Query: 228 ----RNYG-------PEIDIWSAGVILYILLCGVPPFWAESEQGVAQ-AILRGLIDFKRD 275
R G P+ D+WS G ILY + G PF +Q + Q + L +ID +
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----QQIINQISKLHAIIDPNHE 286
Query: 276 -PWPNVSES-AKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
+P++ E + +++ L+ DPK R++ ++L HP++Q
Sbjct: 287 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + +++G G + ++ + +++ A K ++ + +D R E+A + L ++S
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 113 -SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
I+ L + D +++VME C +L + + + + ++E V H+H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF---SEIVGSPYYMAPEVLK- 227
G++H DLKP NFL + LK IDFG++ +P VG+ YM PE +K
Sbjct: 175 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 228 ----RNYG-------PEIDIWSAGVILYILLCGVPPFWAESEQGVAQ-AILRGLIDFKRD 275
R G P+ D+WS G ILY + G PF +Q + Q + L +ID +
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----QQIINQISKLHAIIDPNHE 286
Query: 276 -PWPNVSES-AKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
+P++ E + +++ L+ DPK R++ ++L HP++Q
Sbjct: 287 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 135/273 (49%), Gaps = 17/273 (6%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
E+ + ++G+G FG + ID T++++A K I + ++ D+++E+ ++
Sbjct: 26 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQC- 82
Query: 110 KNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCH 169
+ + + D + ++ME GG D ++ G E A + R I++ + H
Sbjct: 83 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLH 141
Query: 170 KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-RFSEIVGSPYYMAPEVLKR 228
IHRD+K N L + E+ +K DFG++ + + + VG+P++MAPEV+K+
Sbjct: 142 SEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 229 N-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW--PNVSESAK 285
+ Y + DIWS G+ L G PP SE + + LI P N S+ K
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPP---HSELHPMKVLF--LIPKNNPPTLEGNYSKPLK 253
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPW-LQNAKKA 317
V L +P R TAK++L+H + L+NAKK
Sbjct: 254 EFVEACLNKEPSFRPTAKELLKHKFILRNAKKT 286
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 135/273 (49%), Gaps = 17/273 (6%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
E+ + ++G+G FG + ID T++++A K I + ++ D+++E+ ++
Sbjct: 6 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQC- 62
Query: 110 KNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCH 169
+ + + D + ++ME GG D ++ G E A + R I++ + H
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLH 121
Query: 170 KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-RFSEIVGSPYYMAPEVLKR 228
IHRD+K N L + E+ +K DFG++ + + + VG+P++MAPEV+K+
Sbjct: 122 SEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 229 N-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW--PNVSESAK 285
+ Y + DIWS G+ L G PP SE + + LI P N S+ K
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPP---HSELHPMKVLF--LIPKNNPPTLEGNYSKPLK 233
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPW-LQNAKKA 317
V L +P R TAK++L+H + L+NAKK
Sbjct: 234 EFVEACLNKEPSFRPTAKELLKHKFILRNAKKT 266
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 13/246 (5%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG L + T EL A K + K + D++ E ++ K + L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ + ++ VME GG+L I G + E A I + G+I+RDL
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 147
Query: 179 KPENFLFANKKENSPLKAIDFGL---SIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPEI 234
K +N + ++ +K DFG+ +I+ G G+P Y+APE++ + YG +
Sbjct: 148 KLDNVMLDSEGH---IKIADFGMCKENIW--DGVTTKXFCGTPDYIAPEIIAYQPYGKSV 202
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D W+ GV+LY +L G PF E E + Q+I+ + + + ++S+ A ++ + ++
Sbjct: 203 DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTK 258
Query: 295 DPKLRL 300
P RL
Sbjct: 259 HPGKRL 264
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + +++G G + ++ + +++ A K ++ + +D R E+A + L ++S
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 87
Query: 113 -SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
I+ L + D +++VME C +L + + + + ++E V H+H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF---SEIVGSPYYMAPEVLK- 227
G++H DLKP NFL + LK IDFG++ +P VG+ YM PE +K
Sbjct: 147 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKD 202
Query: 228 ----RNYG-------PEIDIWSAGVILYILLCGVPPFWAESEQGVAQ-AILRGLIDFKRD 275
R G P+ D+WS G ILY + G PF +Q + Q + L +ID +
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----QQIINQISKLHAIIDPNHE 258
Query: 276 -PWPNVSES-AKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
+P++ E + +++ L+ DPK R++ ++L HP++Q
Sbjct: 259 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + +++G G + ++ + +++ A K ++ + +D R E+A + L ++S
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 68
Query: 113 -SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
I+ L + D +++VME C +L + + + + ++E V H+H
Sbjct: 69 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF---SEIVGSPYYMAPEVLK- 227
G++H DLKP NFL + LK IDFG++ +P VG+ YM PE +K
Sbjct: 128 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 228 ----RNYG-------PEIDIWSAGVILYILLCGVPPFWAESEQGVAQ-AILRGLIDFKRD 275
R G P+ D+WS G ILY + G PF +Q + Q + L +ID +
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----QQIINQISKLHAIIDPNHE 239
Query: 276 -PWPNVSES-AKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
+P++ E + +++ L+ DPK R++ ++L HP++Q
Sbjct: 240 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 138/305 (45%), Gaps = 49/305 (16%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
+D Y + R+LGRG++ + I+ E + K + V + ++RE+ I+++L
Sbjct: 36 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK------PVKKNKIKREIKILENLR 89
Query: 110 KNSSIVSLKEACED--DNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
+I++L + +D LV E + F ++ T+ I++ +
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDY 146
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL- 226
CH G++HRD+KP N + + E+ L+ ID+GL+ F+ PG+ ++ V S Y+ PE+L
Sbjct: 147 CHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV 204
Query: 227 -KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF------- 272
+ Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 273 ------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
R W VS A + ++L D + RLTA++ +EHP+
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 312 QNAKK 316
K
Sbjct: 325 YTVVK 329
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + +++G G + ++ + +++ A K ++ + +D R E+A + L ++S
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 87
Query: 113 -SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
I+ L + D +++VME C +L + + + + ++E V H+H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF---SEIVGSPYYMAPEVLK- 227
G++H DLKP NFL + LK IDFG++ +P VG+ YM PE +K
Sbjct: 147 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 228 ----RNYG-------PEIDIWSAGVILYILLCGVPPFWAESEQGVAQ-AILRGLIDFKRD 275
R G P+ D+WS G ILY + G PF +Q + Q + L +ID +
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----QQIINQISKLHAIIDPNHE 258
Query: 276 -PWPNVSES-AKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
+P++ E + +++ L+ DPK R++ ++L HP++Q
Sbjct: 259 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 135/273 (49%), Gaps = 17/273 (6%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
E+ + ++G+G FG + ID T++++A K I + ++ D+++E+ ++
Sbjct: 6 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQC- 62
Query: 110 KNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCH 169
+ + + D + ++ME GG D ++ G E A + R I++ + H
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLH 121
Query: 170 KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-RFSEIVGSPYYMAPEVLKR 228
IHRD+K N L + E+ +K DFG++ + + + VG+P++MAPEV+K+
Sbjct: 122 SEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 229 N-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW--PNVSESAK 285
+ Y + DIWS G+ L G PP SE + + LI P N S+ K
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPP---HSELHPMKVLF--LIPKNNPPTLEGNYSKPLK 233
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPW-LQNAKKA 317
V L +P R TAK++L+H + L+NAKK
Sbjct: 234 EFVEACLNKEPSFRPTAKELLKHKFILRNAKKT 266
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 13/246 (5%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG L + T EL A K + K + D++ E ++ K + L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
+ + ++ VME GG+L I G + E A I + G+I+RDL
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 468
Query: 179 KPENFLFANKKENSPLKAIDFGL---SIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPEI 234
K +N + ++ +K DFG+ +I+ G G+P Y+APE++ + YG +
Sbjct: 469 KLDNVMLDSEGH---IKIADFGMCKENIW--DGVTTKXFCGTPDYIAPEIIAYQPYGKSV 523
Query: 235 DIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEP 294
D W+ GV+LY +L G PF E E + Q+I+ + + + ++S+ A ++ + ++
Sbjct: 524 DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTK 579
Query: 295 DPKLRL 300
P RL
Sbjct: 580 HPGKRL 585
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 129/258 (50%), Gaps = 12/258 (4%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
ED +L R LGRG FG + C + T +L ACK ++K++L+ E I+ +
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV- 242
Query: 110 KNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVA----RGHYTERAAAAVTRTIVEVV 165
+ IVSL A E + LVM + GG++ I + E A T IV +
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE-IVGSPYYMAPE 224
+ H+ +I+RDLKPEN L ++ ++ D GL++ K G+ ++ G+P +MAPE
Sbjct: 303 EHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 225 -VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSE 282
+L Y +D ++ GV LY ++ PF A E+ V L+ + + +P+ S
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSP 418
Query: 283 SAKSLVRQMLEPDPKLRL 300
++K +L+ DP+ RL
Sbjct: 419 ASKDFCEALLQKDPEKRL 436
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 129/258 (50%), Gaps = 12/258 (4%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
ED +L R LGRG FG + C + T +L ACK ++K++L+ E I+ +
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV- 242
Query: 110 KNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVA----RGHYTERAAAAVTRTIVEVV 165
+ IVSL A E + LVM + GG++ I + E A T IV +
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE-IVGSPYYMAPE 224
+ H+ +I+RDLKPEN L ++ ++ D GL++ K G+ ++ G+P +MAPE
Sbjct: 303 EHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 225 -VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSE 282
+L Y +D ++ GV LY ++ PF A E+ V L+ + + +P+ S
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSP 418
Query: 283 SAKSLVRQMLEPDPKLRL 300
++K +L+ DP+ RL
Sbjct: 419 ASKDFCEALLQKDPEKRL 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 129/258 (50%), Gaps = 12/258 (4%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
ED +L R LGRG FG + C + T +L ACK ++K++L+ E I+ +
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV- 242
Query: 110 KNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVA----RGHYTERAAAAVTRTIVEVV 165
+ IVSL A E + LVM + GG++ I + E A T IV +
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE-IVGSPYYMAPE 224
+ H+ +I+RDLKPEN L ++ ++ D GL++ K G+ ++ G+P +MAPE
Sbjct: 303 EHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 225 -VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSE 282
+L Y +D ++ GV LY ++ PF A E+ V L+ + + +P+ S
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSP 418
Query: 283 SAKSLVRQMLEPDPKLRL 300
++K +L+ DP+ RL
Sbjct: 419 ASKDFCEALLQKDPEKRL 436
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 129/258 (50%), Gaps = 12/258 (4%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
ED +L R LGRG FG + C + T +L ACK ++K++L+ E I+ +
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV- 242
Query: 110 KNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVA----RGHYTERAAAAVTRTIVEVV 165
+ IVSL A E + LVM + GG++ I + E A T IV +
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE-IVGSPYYMAPE 224
+ H+ +I+RDLKPEN L ++ ++ D GL++ K G+ ++ G+P +MAPE
Sbjct: 303 EHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 225 -VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN-VSE 282
+L Y +D ++ GV LY ++ PF A E+ V L+ + + +P+ S
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSP 418
Query: 283 SAKSLVRQMLEPDPKLRL 300
++K +L+ DP+ RL
Sbjct: 419 ASKDFCEALLQKDPEKRL 436
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 136/334 (40%), Gaps = 75/334 (22%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSI--SKRKLRTAVDIDDVRRE 101
VP +++ RY V + +G+G FG D + +A K + KR R A + E
Sbjct: 90 VPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE------E 143
Query: 102 VAIMKHLPKNS-----SIVSLKEACEDDNAVHLVMELCEGG--ELFDRIVARGHYTERAA 154
+ I++HL K +++ + E N + + EL EL + +G ++
Sbjct: 144 IRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLV 202
Query: 155 AAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+I++ + HK+ +IH DLKPEN L ++ S +K IDFG S + +R
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILL-KQQGRSGIKVIDFGSSCY--EHQRVYTX 259
Query: 215 VGSPYYMAPEV-LKRNYGPEIDIWSAGVILYILLCGVP--PFWAESEQGVAQAILRGLID 271
+ S +Y APEV L YG ID+WS G IL LL G P P E +Q L G+
Sbjct: 260 IQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPS 319
Query: 272 FK-------------------------------------------RDP-----WPNVSES 283
K R P W N +
Sbjct: 320 QKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379
Query: 284 AKS-----LVRQMLEPDPKLRLTAKQVLEHPWLQ 312
++Q LE DP +R+T Q L HPWL+
Sbjct: 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + +++G G + ++ + +++ A K ++ + +D R E+A + L ++S
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 71
Query: 113 -SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
I+ L + D +++VME C +L + + + + ++E V H+H
Sbjct: 72 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 130
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF---SEIVGSPYYMAPEVLK- 227
G++H DLKP NFL + LK IDFG++ +P VG+ YM PE +K
Sbjct: 131 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 228 ----RNYG-------PEIDIWSAGVILYILLCGVPPFWAESEQGVAQ-AILRGLIDFKRD 275
R G P+ D+WS G ILY + G PF +Q + Q + L +ID +
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----QQIINQISKLHAIIDPNHE 242
Query: 276 -PWPNVSES-AKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
+P++ E + +++ L+ DPK R++ ++L HP++Q
Sbjct: 243 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y + +++G G + ++ + +++ A K ++ + +D R E+A + L ++S
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 67
Query: 113 -SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKH 171
I+ L + D +++VME C +L + + + + ++E V H+H
Sbjct: 68 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 126
Query: 172 GVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF---SEIVGSPYYMAPEVLK- 227
G++H DLKP NFL + LK IDFG++ +P VG+ YM PE +K
Sbjct: 127 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 228 ----RNYG-------PEIDIWSAGVILYILLCGVPPFWAESEQGVAQ-AILRGLIDFKRD 275
R G P+ D+WS G ILY + G PF +Q + Q + L +ID +
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF----QQIINQISKLHAIIDPNHE 238
Query: 276 -PWPNVSES-AKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
+P++ E + +++ L+ DPK R++ ++L HP++Q
Sbjct: 239 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 133/270 (49%), Gaps = 21/270 (7%)
Query: 36 QPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI 95
+P T L + + ED ++ + +GRG FG + ++T + A K ++K ++ +
Sbjct: 76 KPFTQLVKEMQLHREDFEII-KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET 134
Query: 96 DDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVA-RGHYTERAA 154
R E ++ + I +L A +D+N ++LVM+ GG+L + E A
Sbjct: 135 ACFREERDVLVN-GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA 193
Query: 155 AAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFG--LSIFFKPGERFS 212
+V + H+ +HRD+KP+N L N ++ DFG L + + S
Sbjct: 194 RFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSS 250
Query: 213 EIVGSPYYMAPEVLKR------NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAIL 266
VG+P Y++PE+L+ YGPE D WS GV +Y +L G PF+AES + +
Sbjct: 251 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES---LVETYG 307
Query: 267 RGLIDFKRDPWP----NVSESAKSLVRQML 292
+ + +R +P +VSE AK L+++++
Sbjct: 308 KIMNHEERFQFPSHVTDVSEEAKDLIQRLI 337
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 133/270 (49%), Gaps = 21/270 (7%)
Query: 36 QPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI 95
+P T L + + ED ++ + +GRG FG + ++T + A K ++K ++ +
Sbjct: 60 KPFTQLVKEMQLHREDFEII-KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET 118
Query: 96 DDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVA-RGHYTERAA 154
R E ++ + I +L A +D+N ++LVM+ GG+L + E A
Sbjct: 119 ACFREERDVLVN-GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA 177
Query: 155 AAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFG--LSIFFKPGERFS 212
+V + H+ +HRD+KP+N L N ++ DFG L + + S
Sbjct: 178 RFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSS 234
Query: 213 EIVGSPYYMAPEVLKR------NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAIL 266
VG+P Y++PE+L+ YGPE D WS GV +Y +L G PF+AES + +
Sbjct: 235 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES---LVETYG 291
Query: 267 RGLIDFKRDPWP----NVSESAKSLVRQML 292
+ + +R +P +VSE AK L+++++
Sbjct: 292 KIMNHEERFQFPSHVTDVSEEAKDLIQRLI 321
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 130/298 (43%), Gaps = 39/298 (13%)
Query: 47 ENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMK 106
+ + ++Y ++G G +GV Y D R ++A K I + +R E++++K
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIR-EISLLK 74
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEG--GELFDRIVARGHYTERAAAAVTRTIVEV 164
L + +IVSL + + + LV E E ++ D + + ++
Sbjct: 75 EL-HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRG 131
Query: 165 VQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAP 223
V CH+H ++HRDLKP+N L + + LK DFGL+ F P ++ V + +Y AP
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAP 188
Query: 224 EVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAIL--------------- 266
+VL + Y +DIWS G I ++ G P F ++ I
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248
Query: 267 -------RGLIDFKRDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
R F++ PW P + L+ ML DP R++A+ + HP+ ++
Sbjct: 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 30/271 (11%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
ELG G FG Y +++T L A K I + ++ +++D E+ I+ + IV L
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVI---ETKSEEELEDYIVEIEILATC-DHPYIVKL 81
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVA---RGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
A D + +++E C GG + D I+ RG TE V R ++E + H +I
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRII 139
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLK------ 227
HRDLK N L + + ++ DFG+S K ++ +G+PY+MAPEV+
Sbjct: 140 HRDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSL 287
Y + DIWS G+ L + PP E + +L+ K DP ++ S S+
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPP---HHELNPMRVLLKIA---KSDPPTLLTPSKWSV 250
Query: 288 -----VRQMLEPDPKLRLTAKQVLEHPWLQN 313
++ L+ +P+ R +A Q+LEHP++ +
Sbjct: 251 EFRDFLKIALDKNPETRPSAAQLLEHPFVSS 281
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 130/298 (43%), Gaps = 39/298 (13%)
Query: 47 ENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMK 106
+ + ++Y ++G G +GV Y D R ++A K I + +R E++++K
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIR-EISLLK 74
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEG--GELFDRIVARGHYTERAAAAVTRTIVEV 164
L + +IVSL + + + LV E E ++ D + + ++
Sbjct: 75 EL-HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRG 131
Query: 165 VQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSEIVGSPYYMAP 223
V CH+H ++HRDLKP+N L + + LK DFGL+ F P ++ V + +Y AP
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAP 188
Query: 224 EVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAIL--------------- 266
+VL + Y +DIWS G I ++ G P F ++ I
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248
Query: 267 -------RGLIDFKRDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
R F++ PW P + L+ ML DP R++A+ + HP+ ++
Sbjct: 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 30/271 (11%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
ELG G FG Y +++T L A K I + + +++D E+ I+ + IV L
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATC-DHPYIVKL 73
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVA---RGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
A D + +++E C GG + D I+ RG TE V R ++E + H +I
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRII 131
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSI-FFKPGERFSEIVGSPYYMAPEVLK------ 227
HRDLK N L + + ++ DFG+S K ++ +G+PY+MAPEV+
Sbjct: 132 HRDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 228 RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSL 287
Y + DIWS G+ L + PP E + +L+ K DP ++ S S+
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPP---HHELNPMRVLLKIA---KSDPPTLLTPSKWSV 242
Query: 288 -----VRQMLEPDPKLRLTAKQVLEHPWLQN 313
++ L+ +P+ R +A Q+LEHP++ +
Sbjct: 243 EFRDFLKIALDKNPETRPSAAQLLEHPFVSS 273
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 151/315 (47%), Gaps = 36/315 (11%)
Query: 37 PITVLAGVPKENI---EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAV 93
P+ V + NI E+ + +G+G FG + ID T++++A K I + +
Sbjct: 6 PVAVQVPGMQNNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEI 65
Query: 94 DIDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERA 153
+ D+++E+ ++ +S + + + + ++ME GG D + A G + E
Sbjct: 66 E--DIQQEITVLSQC-DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA-GPFDEFQ 121
Query: 154 AAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-RFS 212
A + + I++ + H IHRD+K N L + E +K DFG++ + + +
Sbjct: 122 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRN 178
Query: 213 EIVGSPYYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLID 271
VG+P++MAPEV++++ Y + DIWS G+ L G PP +R L
Sbjct: 179 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP-------NSDMHPMRVLFL 231
Query: 272 FKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWL-QNAKKAPNVPLGDVV 326
++ P + ++S K + L DP R TAK++L+H ++ +N+KK
Sbjct: 232 IPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKT--------- 282
Query: 327 RSRLKQFSMMNRFKR 341
S L + +++RFKR
Sbjct: 283 -SYLTE--LIDRFKR 294
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 21/268 (7%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+DR +G+G FG Y ID T+E++A K I + + +D+++E+ ++ + I
Sbjct: 24 LDR-IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEI--EDIQQEITVLSQC-DSPYI 79
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVI 174
+ + ++ME GG D ++ G E A + R I++ + H I
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKI 138
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-RFSEIVGSPYYMAPEVLKRN-YGP 232
HRD+K N L + E +K DFG++ + + + VG+P++MAPEV+K++ Y
Sbjct: 139 HRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDF 195
Query: 233 EIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV----SESAKSLV 288
+ DIWS G+ L G PP +R L ++ P + S+ K V
Sbjct: 196 KADIWSLGITAIELAKGEPP-------NSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFV 248
Query: 289 RQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
L DP+ R TAK++L+H ++ K
Sbjct: 249 EACLNKDPRFRPTAKELLKHKFITRYTK 276
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 21/255 (8%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSI--SKRKLRTAVDIDDVRRE 101
VP +++ RY V + +G+G FG D + +A K + KR R A + E
Sbjct: 90 VPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE------E 143
Query: 102 VAIMKHLPKNS-----SIVSLKEACEDDNAVHLVMELCEGG--ELFDRIVARGHYTERAA 154
+ I++HL K +++ + E N + + EL EL + +G ++
Sbjct: 144 IRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLV 202
Query: 155 AAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+I++ + HK+ +IH DLKPEN L ++ S +K IDFG S + +R
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILL-KQQGRSGIKVIDFGSSCY--EHQRVYXX 259
Query: 215 VGSPYYMAPEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFK 273
+ S +Y APEV L YG ID+WS G IL LL G P E E G A + L+
Sbjct: 260 IQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE-GDQLACMIELLGMP 318
Query: 274 RDPWPNVSESAKSLV 288
+ S+ AK+ V
Sbjct: 319 XQKLLDASKRAKNFV 333
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 287 LVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGD 324
++Q LE DP +R+T Q L HPWL+ ++ P P G+
Sbjct: 388 FLKQCLEWDPAVRMTPGQALRHPWLR--RRLPKPPTGE 423
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 140/284 (49%), Gaps = 24/284 (8%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDID-DVRREVAIMKHLPK 110
+YL+ LG G +G +D +T A K + K+KLR + + +V++E+ +++ L +
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-R 64
Query: 111 NSSIVSLKEAC--EDDNAVHLVMELCEGG--ELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+ +++ L + E+ +++VME C G E+ D + + +A + +++ ++
Sbjct: 65 HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQ-LIDGLE 123
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-----RFSEIVGSPYYM 221
H G++H+D+KP N L LK G++ P R S+ GSP +
Sbjct: 124 YLHSQGIVHKDIKPGNLLLTT---GGTLKISALGVAEALHPFAADDTCRTSQ--GSPAFQ 178
Query: 222 APEV---LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
PE+ L G ++DIWSAGV LY + G+ PF ++ + + I +G D P
Sbjct: 179 PPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGP 238
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPL 322
+S+ L++ MLE +P R + +Q+ +H W + P+
Sbjct: 239 PLSD----LLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPV 278
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 25/283 (8%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
N ED + + ELG +FG Y +++T L A K I + + +++D E+ I+
Sbjct: 9 NPEDFWEIIGELG--DFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS 63
Query: 108 LPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH--YTERAAAAVTRTIVEVV 165
+ +IV L +A +N + +++E C GG + D ++ TE V + ++ +
Sbjct: 64 C-DHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDAL 121
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSI--FFKPGERFSEIVGSPYYMAP 223
H + +IHRDLK N LF + +K DFG+S +R +G+PY+MAP
Sbjct: 122 NYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAP 178
Query: 224 EVL------KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDP- 276
EV+ R Y + D+WS G+ L + PP + V I + P
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPS 238
Query: 277 -WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAP 318
W S + K +++ LE + R T Q+L+HP++ P
Sbjct: 239 RW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 278
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 144/349 (41%), Gaps = 59/349 (16%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S + S +R + G+ + P E Y + +G G FGV Y D+ E
Sbjct: 21 SAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGE 80
Query: 78 LLACKSISKRKLRTAVDIDDVR---REVAIMKHLPKNSSIVSLK----EACEDDNAVHLV 130
L+A K + + D R RE+ IM+ L + +IV L+ + E + V+L
Sbjct: 81 LVAIKKV----------LQDKRFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLN 129
Query: 131 MELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL------CHKHGVIHRDLKPENFL 184
+ L E R VAR + + V + + QL H G+ HRD+KP+N L
Sbjct: 130 LVLDYVPETVYR-VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 188
Query: 185 FANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVI 242
+ + LK DFG + GE + S YY APE++ +Y ID+WSAG +
Sbjct: 189 L--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 246
Query: 243 LYILLCGVPPFWAESEQGVAQAI-------------LRGL---------IDFKRDPW--- 277
L LL G P F +S GV Q + +R + K PW
Sbjct: 247 LAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV 304
Query: 278 --PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGD 324
P A +L ++LE P RLT + H + + PNV L +
Sbjct: 305 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD-PNVKLPN 352
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 144/349 (41%), Gaps = 59/349 (16%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S + S +R + G+ + P E Y + +G G FGV Y D+ E
Sbjct: 66 SAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGE 125
Query: 78 LLACKSISKRKLRTAVDIDDVR---REVAIMKHLPKNSSIVSLK----EACEDDNAVHLV 130
L+A K + + D R RE+ IM+ L + +IV L+ + E + V+L
Sbjct: 126 LVAIKKV----------LQDKRFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLN 174
Query: 131 MELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL------CHKHGVIHRDLKPENFL 184
+ L E R VAR + + V + + QL H G+ HRD+KP+N L
Sbjct: 175 LVLDYVPETVYR-VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 233
Query: 185 FANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVI 242
+ + LK DFG + GE + S YY APE++ +Y ID+WSAG +
Sbjct: 234 L--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 291
Query: 243 LYILLCGVPPFWAESEQGVAQAI-------------LRGL---------IDFKRDPW--- 277
L LL G P F +S GV Q + +R + K PW
Sbjct: 292 LAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV 349
Query: 278 --PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGD 324
P A +L ++LE P RLT + H + + PNV L +
Sbjct: 350 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD-PNVKLPN 397
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P+ + + LG G +G + ++ L A K S R D EV
Sbjct: 51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGS 109
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARG-HYTERAAAAVTRTIVE 163
+ + ++ V L++A E+ ++L ELC G L A G E R +
Sbjct: 110 HEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLL 168
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAP 223
+ H G++H D+KP N + K DFGL + G P YMAP
Sbjct: 169 ALAHLHSQGLVHLDVKPANIFLGPRGR---CKLGDFGLLVELGTAGAGEVQEGDPRYMAP 225
Query: 224 EVLKRNYGPEIDIWSAGVILYILLCGVP-PFWAESEQGVAQAILRGLIDFKRDPWPNVSE 282
E+L+ +YG D++S G+ + + C + P E Q + Q L +F +S
Sbjct: 226 ELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLP--PEFTA----GLSS 279
Query: 283 SAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
+S++ MLEPDPKLR TA+ +L P L+
Sbjct: 280 ELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 13/229 (5%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDD--VRREVAIMKHLPKNSSIVS 116
LG G+F Y D++T +++A K I A D + RE+ +++ L + +I+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIG 76
Query: 117 LKEACEDDNAVHLVMELCEGGELFDRIVARGHY--TERAAAAVTRTIVEVVQLCHKHGVI 174
L +A + + LV + E + I+ T A ++ ++ H+H ++
Sbjct: 77 LLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 134
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFF-KPGERFSEIVGSPYYMAPEVL--KRNYG 231
HRDLKP N L EN LK DFGL+ F P + V + +Y APE+L R YG
Sbjct: 135 HRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYG 191
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV 280
+D+W+ G IL LL VP +S+ I L + WP++
Sbjct: 192 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 144/349 (41%), Gaps = 59/349 (16%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S + S +R + G+ + P E Y + +G G FGV Y D+ E
Sbjct: 15 SAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGE 74
Query: 78 LLACKSISKRKLRTAVDIDDVR---REVAIMKHLPKNSSIVSLK----EACEDDNAVHLV 130
L+A K + + D R RE+ IM+ L + +IV L+ + E + V+L
Sbjct: 75 LVAIKKV----------LQDKRFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLN 123
Query: 131 MELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL------CHKHGVIHRDLKPENFL 184
+ L E R VAR + + V + + QL H G+ HRD+KP+N L
Sbjct: 124 LVLDYVPETVYR-VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 182
Query: 185 FANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVI 242
+ + LK DFG + GE + S YY APE++ +Y ID+WSAG +
Sbjct: 183 L--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 240
Query: 243 LYILLCGVPPFWAESEQGVAQAI-------------LRGL---------IDFKRDPW--- 277
L LL G P F +S GV Q + +R + K PW
Sbjct: 241 LAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV 298
Query: 278 --PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGD 324
P A +L ++LE P RLT + H + + PNV L +
Sbjct: 299 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD-PNVKLPN 346
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 144/349 (41%), Gaps = 59/349 (16%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S + S +R + G+ + P E Y + +G G FGV Y D+ E
Sbjct: 21 SAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGE 80
Query: 78 LLACKSISKRKLRTAVDIDDVR---REVAIMKHLPKNSSIVSLK----EACEDDNAVHLV 130
L+A K + + D R RE+ IM+ L + +IV L+ + E + V+L
Sbjct: 81 LVAIKKV----------LQDKRFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLN 129
Query: 131 MELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL------CHKHGVIHRDLKPENFL 184
+ L E R VAR + + V + + QL H G+ HRD+KP+N L
Sbjct: 130 LVLDYVPETVYR-VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 188
Query: 185 FANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVI 242
+ + LK DFG + GE + S YY APE++ +Y ID+WSAG +
Sbjct: 189 L--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCV 246
Query: 243 LYILLCGVPPFWAESEQGVAQAI-------------LRGL---------IDFKRDPW--- 277
L LL G P F +S GV Q + +R + K PW
Sbjct: 247 LAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV 304
Query: 278 --PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGD 324
P A +L ++LE P RLT + H + + PNV L +
Sbjct: 305 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD-PNVKLPN 352
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 144/349 (41%), Gaps = 59/349 (16%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S + S +R + G+ + P E Y + +G G FGV Y D+ E
Sbjct: 23 SAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGE 82
Query: 78 LLACKSISKRKLRTAVDIDDVR---REVAIMKHLPKNSSIVSLK----EACEDDNAVHLV 130
L+A K + + D R RE+ IM+ L + +IV L+ + E + V+L
Sbjct: 83 LVAIKKV----------LQDKRFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLN 131
Query: 131 MELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL------CHKHGVIHRDLKPENFL 184
+ L E R VAR + + V + + QL H G+ HRD+KP+N L
Sbjct: 132 LVLDYVPETVYR-VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 190
Query: 185 FANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVI 242
+ + LK DFG + GE + S YY APE++ +Y ID+WSAG +
Sbjct: 191 L--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 248
Query: 243 LYILLCGVPPFWAESEQGVAQAI-------------LRGL---------IDFKRDPW--- 277
L LL G P F +S GV Q + +R + K PW
Sbjct: 249 LAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV 306
Query: 278 --PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGD 324
P A +L ++LE P RLT + H + + PNV L +
Sbjct: 307 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD-PNVKLPN 354
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 144/349 (41%), Gaps = 59/349 (16%)
Query: 18 SNYSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRE 77
S + S +R + G+ + P E Y + +G G FGV Y D+ E
Sbjct: 25 SAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGE 84
Query: 78 LLACKSISKRKLRTAVDIDDVR---REVAIMKHLPKNSSIVSLK----EACEDDNAVHLV 130
L+A K + + D R RE+ IM+ L + +IV L+ + E + V+L
Sbjct: 85 LVAIKKV----------LQDKRFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLN 133
Query: 131 MELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL------CHKHGVIHRDLKPENFL 184
+ L E R VAR + + V + + QL H G+ HRD+KP+N L
Sbjct: 134 LVLDYVPETVYR-VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 192
Query: 185 FANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVI 242
+ + LK DFG + GE + S YY APE++ +Y ID+WSAG +
Sbjct: 193 L--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 250
Query: 243 LYILLCGVPPFWAESEQGVAQAI-------------LRGL---------IDFKRDPW--- 277
L LL G P F +S GV Q + +R + K PW
Sbjct: 251 LAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV 308
Query: 278 --PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGD 324
P A +L ++LE P RLT + H + + PNV L +
Sbjct: 309 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD-PNVKLPN 356
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 91/158 (57%), Gaps = 7/158 (4%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D DN+G +S+ EL +R+ G +E+EV L+ +D +G +
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64
Query: 411 DYGEFLAVLL-HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV-AN 468
++ EFLA++ L+ +++ L +AF FDK+G+G I EL+ L G + TD +
Sbjct: 65 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG-EKLTDAEVD 123
Query: 469 DIFQEVDTDKDGLISYDEFVAMMKTGTDW---RKASRH 503
D+ +EV +D G I+ +F A++ G+ RKA R+
Sbjct: 124 DMLREV-SDGSGEINIQQFAALLSKGSSTGTRRKALRN 160
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 140/337 (41%), Gaps = 57/337 (16%)
Query: 31 GANKKQPITVLAGVPKENI----EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISK 86
GA +T + P + E Y + +G G FGV Y D+ EL+A K + +
Sbjct: 1 GAMSLSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ 60
Query: 87 RKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK----EACEDDNAVHLVMELCEGGELFDR 142
K RE+ IM+ L + +IV L+ + E + V+L + L E R
Sbjct: 61 DKRFK-------NRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR 112
Query: 143 IVARGHYTERAAAAVTRTIVEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKA 196
VAR + + V + + QL H G+ HRD+KP+N L + + LK
Sbjct: 113 -VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKL 169
Query: 197 IDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFW 254
DFG + GE + S YY APE++ +Y ID+WSAG +L LL G P F
Sbjct: 170 CDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 229
Query: 255 AESEQGVAQAI-------------LRGL---------IDFKRDPW-----PNVSESAKSL 287
+S GV Q + +R + K PW P A +L
Sbjct: 230 GDS--GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 287
Query: 288 VRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGD 324
++LE P RLT + H + + PNV L +
Sbjct: 288 CSRLLEYTPTARLTPLEACAHSFFDELRD-PNVKLPN 323
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 350 FLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGT 409
FLS E + + K F D+D G +ST EL +R G + E+ +IE VD +G GT
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 410 LDYGEFLAVLLHLRRMAND------EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDC 463
+D+ EFL ++ +R+M D E L F FDK+ +G+I+ EL + L G
Sbjct: 73 IDFEEFLVMM--VRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 464 TDVANDIFQEVDTDKDGLISYDEFVAMMK 492
+ D+ ++ D + DG I +DEF+ MM+
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 55/148 (37%), Gaps = 14/148 (9%)
Query: 380 KAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFD 439
+A R F S+ +E + + D +G G + E V+ L + E L D
Sbjct: 7 QAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVD 66
Query: 440 KDGNGYIEPNE----LRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMMKTGT 495
+DG+G I+ E + + ED + D F+ D + DG I +E G
Sbjct: 67 EDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEEL------GE 120
Query: 496 DWRKASRHYSRGRFNSLSIKLMKDGSLN 523
R H + LMKD N
Sbjct: 121 ILRATGEHVTEEDIED----LMKDSDKN 144
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 139/342 (40%), Gaps = 49/342 (14%)
Query: 20 YSSHDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELL 79
+ S +R + G+ + P E Y + +G G FGV Y D+ EL+
Sbjct: 1 FGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELV 60
Query: 80 ACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK----EACEDDNAVHLVMELCE 135
A K + + K RE+ IM+ L + +IV L+ + E + V+L + L
Sbjct: 61 AIKKVLQDKRFK-------NRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 112
Query: 136 GGELFDRIVARGHYTERAAAAVTRTIVEVVQL------CHKHGVIHRDLKPENFLFANKK 189
E R VAR + + V + + QL H G+ HRD+KP+N L
Sbjct: 113 VPETVYR-VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DP 169
Query: 190 ENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILL 247
+ + LK DFG + GE + S YY APE++ +Y ID+WSAG +L LL
Sbjct: 170 DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
Query: 248 CGVPPFWAESEQGVAQAILRGL--------------------IDFKRDPW-----PNVSE 282
G P F +S I++ L K PW P
Sbjct: 230 LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 289
Query: 283 SAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGD 324
A +L ++LE P RLT + H + + PNV L +
Sbjct: 290 EAIALCSRLLEYTPTARLTPLEACAHSFFDELRD-PNVKLPN 330
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 350 FLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGT 409
FLS E + + K F D+D G +ST EL +R G + E+ +IE VD +G GT
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 410 LDYGEFLAVLLHLRRMAND------EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDC 463
+D+ EFL ++ +R+M D E L F FDK+ +G+I+ EL + L G
Sbjct: 73 IDFEEFLVMM--VRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 464 TDVANDIFQEVDTDKDGLISYDEFVAMMK 492
+ D+ ++ D + DG I +DEF+ MM+
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 133/319 (41%), Gaps = 53/319 (16%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P E Y + +G G FGV Y D+ EL+A K + + K RE+ I
Sbjct: 14 PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQI 66
Query: 105 MKHLPKNSSIVSLK----EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
M+ L + +IV L+ + E + V+L + L E R VAR + + V
Sbjct: 67 MRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYV 124
Query: 161 IVEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+ + QL H G+ HRD+KP+N L + + LK DFG + GE
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 215 VGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAI------- 265
+ S YY APE++ +Y ID+WSAG +L LL G P F +S GV Q +
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLG 240
Query: 266 ------LR---------GLIDFKRDPW-----PNVSESAKSLVRQMLEPDPKLRLTAKQV 305
+R K PW P A +L ++LE P RLT +
Sbjct: 241 TPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
Query: 306 LEHPWLQNAKKAPNVPLGD 324
H + + PNV L +
Sbjct: 301 CAHSFFDELRD-PNVKLPN 318
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 350 FLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGT 409
FLS E + + K F D+D G +ST EL +R G + E+ +IE VD +G GT
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 410 LDYGEFLAVLLHLRRMAND------EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDC 463
+D+ EFL ++ +R+M D E L F FDK+ +G+I+ EL + L G
Sbjct: 73 IDFEEFLVMM--VRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVI 130
Query: 464 TDVANDIFQEVDTDKDGLISYDEFVAMMK 492
+ D+ ++ D + DG I +DEF+ MM+
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 350 FLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGT 409
FLS E + + K F D+D G +ST EL +R G + E+ +IE VD +G GT
Sbjct: 10 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 69
Query: 410 LDYGEFLAVLLHLRRMAND------EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDC 463
+D+ EFL ++ +R+M D E L F FDK+ +G+I+ EL + L G
Sbjct: 70 IDFEEFLVMM--VRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT 127
Query: 464 TDVANDIFQEVDTDKDGLISYDEFVAMMK 492
+ D+ ++ D + DG I +DEF+ MM+
Sbjct: 128 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 156
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 131/317 (41%), Gaps = 49/317 (15%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P E Y + +G G FGV Y D+ EL+A K + + K RE+ I
Sbjct: 26 PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQI 78
Query: 105 MKHLPKNSSIVSLK----EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
M+ L + +IV L+ + E + V+L + L E R VAR + + V
Sbjct: 79 MRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYV 136
Query: 161 IVEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+ + QL H G+ HRD+KP+N L + + LK DFG + GE
Sbjct: 137 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 194
Query: 215 VGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGL--- 269
+ S YY APE++ +Y ID+WSAG +L LL G P F +S I++ L
Sbjct: 195 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 254
Query: 270 -----------------IDFKRDPW-----PNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
K PW P A +L ++LE P RLT +
Sbjct: 255 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 314
Query: 308 HPWLQNAKKAPNVPLGD 324
H + + PNV L +
Sbjct: 315 HSFFDELRD-PNVKLPN 330
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 350 FLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGT 409
FLS E + + K F D+D G +ST EL +R G + E+ +IE VD +G GT
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 410 LDYGEFLAVLLHLRRMAND------EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDC 463
+D+ EFL ++ +R+M D E L F FDK+ +G+I+ EL + L G
Sbjct: 73 IDFEEFLVMM--VRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 464 TDVANDIFQEVDTDKDGLISYDEFVAMMK 492
+ D+ ++ D + DG I +DEF+ MM+
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 55/148 (37%), Gaps = 14/148 (9%)
Query: 380 KAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFD 439
+A R F S+ +E + + D +G G + E V+ L + E L D
Sbjct: 7 QAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVD 66
Query: 440 KDGNGYIEPNE----LRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMMKTGT 495
+DG+G I+ E + + ED + D F+ D + DG I +E G
Sbjct: 67 EDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEEL------GE 120
Query: 496 DWRKASRHYSRGRFNSLSIKLMKDGSLN 523
R H + LMKD N
Sbjct: 121 ILRATGEHVTEEDIED----LMKDSDKN 144
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 56/75 (74%)
Query: 347 IAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNG 406
+AE LS EE+ +KE+FK ID+DN G ++ DELK GL+ GS+L ESE++ L++A D +
Sbjct: 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72
Query: 407 KGTLDYGEFLAVLLH 421
GT+DYGEF+A +H
Sbjct: 73 SGTIDYGEFIAATVH 87
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%)
Query: 431 LHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVA 489
L + F D D +G I +EL+D L G++ D+ D DK G I Y EF+A
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIA 83
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG I +DT E +A K R+ + + + E+ IMK L + ++VS +
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKL-NHPNVVSAR 79
Query: 119 EACE------DDNAVHLVMELCEGGEL---FDRIVARGHYTERAAAAVTRTIVEVVQLCH 169
E + ++ L ME CEGG+L ++ E + I ++ H
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 139
Query: 170 KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL-KR 228
++ +IHRDLKPEN + + K ID G + GE +E VG+ Y+APE+L ++
Sbjct: 140 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQK 199
Query: 229 NYGPEIDIWSAGVILYILLCGVPPF 253
Y +D WS G + + + G PF
Sbjct: 200 KYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG G FG I +DT E +A K R+ + + + E+ IMK L + ++VS +
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERWCLEIQIMKKL-NHPNVVSAR 78
Query: 119 EACE------DDNAVHLVMELCEGGEL---FDRIVARGHYTERAAAAVTRTIVEVVQLCH 169
E + ++ L ME CEGG+L ++ E + I ++ H
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 138
Query: 170 KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL-KR 228
++ +IHRDLKPEN + + K ID G + GE +E VG+ Y+APE+L ++
Sbjct: 139 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQK 198
Query: 229 NYGPEIDIWSAGVILYILLCGVPPF 253
Y +D WS G + + + G PF
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 131/317 (41%), Gaps = 49/317 (15%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P E Y + +G G FGV Y D+ EL+A K + + K RE+ I
Sbjct: 33 PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQI 85
Query: 105 MKHLPKNSSIVSLK----EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
M+ L + +IV L+ + E + V+L + L E R VAR + + V
Sbjct: 86 MRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYV 143
Query: 161 IVEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+ + QL H G+ HRD+KP+N L + + LK DFG + GE
Sbjct: 144 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 201
Query: 215 VGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGL--- 269
+ S YY APE++ +Y ID+WSAG +L LL G P F +S I++ L
Sbjct: 202 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 261
Query: 270 -----------------IDFKRDPW-----PNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
K PW P A +L ++LE P RLT +
Sbjct: 262 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 321
Query: 308 HPWLQNAKKAPNVPLGD 324
H + + PNV L +
Sbjct: 322 HSFFDELRD-PNVKLPN 337
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 131/317 (41%), Gaps = 49/317 (15%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P E Y + +G G FGV Y D+ EL+A K + + K RE+ I
Sbjct: 22 PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQI 74
Query: 105 MKHLPKNSSIVSLK----EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
M+ L + +IV L+ + E + V+L + L E R VAR + + V
Sbjct: 75 MRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYV 132
Query: 161 IVEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+ + QL H G+ HRD+KP+N L + + LK DFG + GE
Sbjct: 133 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 190
Query: 215 VGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGL--- 269
+ S YY APE++ +Y ID+WSAG +L LL G P F +S I++ L
Sbjct: 191 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 250
Query: 270 -----------------IDFKRDPW-----PNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
K PW P A +L ++LE P RLT +
Sbjct: 251 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 310
Query: 308 HPWLQNAKKAPNVPLGD 324
H + + PNV L +
Sbjct: 311 HSFFDELRD-PNVKLPN 326
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 138/334 (41%), Gaps = 52/334 (15%)
Query: 31 GANKKQPITVLAGV---PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKR 87
GA + TV+A P E Y + +G G FGV Y D+ EL+A K + +
Sbjct: 1 GAMGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD 60
Query: 88 KLRTAVDIDDVRREVAIMKHLPKNSSIVSLK----EACEDDNAVHLVMELCEGGELFDRI 143
K RE+ IM+ L + +IV L+ + E + V+L + L E R
Sbjct: 61 KRFK-------NRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR- 111
Query: 144 VARGHYTERAAAAVTRTIVEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKAI 197
VAR + + V + + QL H G+ HRD+KP+N L + + LK
Sbjct: 112 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLC 169
Query: 198 DFGLSIFFKPGERFSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA 255
DFG + GE + S YY APE++ +Y ID+WSAG +L LL G P F
Sbjct: 170 DFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 229
Query: 256 ESEQGVAQAILRGL--------------------IDFKRDPW-----PNVSESAKSLVRQ 290
+S I++ L K PW P A +L +
Sbjct: 230 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 289
Query: 291 MLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGD 324
+LE P RLT + H + + PNV L +
Sbjct: 290 LLEYTPTARLTPLEACAHSFFDELRD-PNVKLPN 322
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 131/317 (41%), Gaps = 49/317 (15%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P E Y + +G G FGV Y D+ EL+A K + + K RE+ I
Sbjct: 27 PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQI 79
Query: 105 MKHLPKNSSIVSLK----EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
M+ L + +IV L+ + E + V+L + L E R VAR + + V
Sbjct: 80 MRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYV 137
Query: 161 IVEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+ + QL H G+ HRD+KP+N L + + LK DFG + GE
Sbjct: 138 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSY 195
Query: 215 VGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGL--- 269
+ S YY APE++ +Y ID+WSAG +L LL G P F +S I++ L
Sbjct: 196 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 255
Query: 270 -----------------IDFKRDPW-----PNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
K PW P A +L ++LE P RLT +
Sbjct: 256 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 315
Query: 308 HPWLQNAKKAPNVPLGD 324
H + + PNV L +
Sbjct: 316 HSFFDELRD-PNVKLPN 331
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 131/317 (41%), Gaps = 49/317 (15%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P E Y + +G G FGV Y D+ EL+A K + + K RE+ I
Sbjct: 14 PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQI 66
Query: 105 MKHLPKNSSIVSLK----EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
M+ L + +IV L+ + E + V+L + L E R VAR + + V
Sbjct: 67 MRKL-DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYV 124
Query: 161 IVEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+ + QL H G+ HRD+KP+N L + + LK DFG + GE
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 215 VGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGL--- 269
+ S YY APE++ +Y ID+WSAG +L LL G P F +S I++ L
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 270 -----------------IDFKRDPW-----PNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
K PW P A +L ++LE P RLT +
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 308 HPWLQNAKKAPNVPLGD 324
H + + PNV L +
Sbjct: 303 HSFFDELRD-PNVKLPN 318
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 133/315 (42%), Gaps = 46/315 (14%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
++ RY +G G +G+ D + +A K IS + +T RE+ I+
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLREIKILLR 97
Query: 108 LPKNSSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
++ +I+ + + E V+LV L G +L+ +++ H + I+
Sbjct: 98 F-RHENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLY-KLLKTQHLSNDHICYFLYQIL 154
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSP 218
++ H V+HRDLKP N L + LK DFGL+ P +E V +
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 219 YYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAI 265
+Y APE++ + Y IDIWS G IL +L P F + G+ +Q
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 271
Query: 266 LRGLIDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHP 309
L +I+ K + PW PN A L+ +ML +P R+ +Q L HP
Sbjct: 272 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 331
Query: 310 WLQNAKKAPNVPLGD 324
+L+ + P+ +
Sbjct: 332 YLEQYYDPSDEPIAE 346
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 131/317 (41%), Gaps = 49/317 (15%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P E Y + +G G FGV Y D+ EL+A K + + K RE+ I
Sbjct: 14 PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQI 66
Query: 105 MKHLPKNSSIVSLK----EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
M+ L + +IV L+ + E + V+L + L E R VAR + + V
Sbjct: 67 MRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYV 124
Query: 161 IVEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+ + QL H G+ HRD+KP+N L + + LK DFG + GE
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 215 VGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGL--- 269
+ S YY APE++ +Y ID+WSAG +L LL G P F +S I++ L
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 270 -----------------IDFKRDPW-----PNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
K PW P A +L ++LE P RLT +
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 308 HPWLQNAKKAPNVPLGD 324
H + + PNV L +
Sbjct: 303 HSFFDELRD-PNVKLPN 318
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 131/317 (41%), Gaps = 49/317 (15%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P E Y + +G G FGV Y D+ EL+A K + + K RE+ I
Sbjct: 14 PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQI 66
Query: 105 MKHLPKNSSIVSLK----EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
M+ L + +IV L+ + E + V+L + L E R VAR + + V
Sbjct: 67 MRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYV 124
Query: 161 IVEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+ + QL H G+ HRD+KP+N L + + LK DFG + GE
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 215 VGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGL--- 269
+ S YY APE++ +Y ID+WSAG +L LL G P F +S I++ L
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 270 -----------------IDFKRDPW-----PNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
K PW P A +L ++LE P RLT +
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 308 HPWLQNAKKAPNVPLGD 324
H + + PNV L +
Sbjct: 303 HSFFDELRD-PNVKLPN 318
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 131/317 (41%), Gaps = 49/317 (15%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P E Y + +G G FGV Y D+ EL+A K + + K RE+ I
Sbjct: 14 PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQI 66
Query: 105 MKHLPKNSSIVSLK----EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
M+ L + +IV L+ + E + V+L + L E R VAR + + V
Sbjct: 67 MRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYV 124
Query: 161 IVEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+ + QL H G+ HRD+KP+N L + + LK DFG + GE
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 215 VGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGL--- 269
+ S YY APE++ +Y ID+WSAG +L LL G P F +S I++ L
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 270 -----------------IDFKRDPW-----PNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
K PW P A +L ++LE P RLT +
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 308 HPWLQNAKKAPNVPLGD 324
H + + PNV L +
Sbjct: 303 HSFFDELRD-PNVKLPN 318
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 132/308 (42%), Gaps = 54/308 (17%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI----DDVRREVA 103
++ D Y + +G G +GV R L + ++ +K+ A D+ RE+
Sbjct: 51 DVGDEYEIIETIGNGAYGVV-----SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 105
Query: 104 IMKHLPKNSSIVSLKEACEDD------NAVHLVMELCEGGELFDRIVARGHYTERAAAAV 157
I+KH K+ +I+++K+ +V++V++L E +L I + T
Sbjct: 106 ILKHF-KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYF 163
Query: 158 TRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPGER---FS 212
++ ++ H VIHRDLKP N L EN LK DFG++ + P E +
Sbjct: 164 LYQLLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMT 220
Query: 213 EIVGSPYYMAPEVLK--RNYGPEIDIWSAGVI---------------------LYILLCG 249
E V + +Y APE++ Y ID+WS G I L +++ G
Sbjct: 221 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 280
Query: 250 VPPFWAESEQGV--AQAILRGLIDFKRDPW----PNVSESAKSLVRQMLEPDPKLRLTAK 303
P G +A ++ L + PW P A SL+ +ML +P R++A
Sbjct: 281 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAA 340
Query: 304 QVLEHPWL 311
L HP+L
Sbjct: 341 AALRHPFL 348
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 131/317 (41%), Gaps = 49/317 (15%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P E Y + +G G FGV Y D+ EL+A K + + K RE+ I
Sbjct: 14 PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQI 66
Query: 105 MKHLPKNSSIVSLK----EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
M+ L + +IV L+ + E + V+L + L E R VAR + + V
Sbjct: 67 MRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYV 124
Query: 161 IVEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+ + QL H G+ HRD+KP+N L + + LK DFG + GE
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 215 VGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGL--- 269
+ S YY APE++ +Y ID+WSAG +L LL G P F +S I++ L
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 270 -----------------IDFKRDPW-----PNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
K PW P A +L ++LE P RLT +
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 308 HPWLQNAKKAPNVPLGD 324
H + + PNV L +
Sbjct: 303 HSFFDELRD-PNVKLPN 318
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 131/317 (41%), Gaps = 49/317 (15%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P E Y + +G G FGV Y D+ EL+A K + + K RE+ I
Sbjct: 15 PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQI 67
Query: 105 MKHLPKNSSIVSLK----EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
M+ L + +IV L+ + E + V+L + L E R VAR + + V
Sbjct: 68 MRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR-VARHYSRAKQTLPVIYV 125
Query: 161 IVEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+ + QL H G+ HRD+KP+N L + + LK DFG + GE
Sbjct: 126 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 183
Query: 215 VGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGL--- 269
+ S YY APE++ +Y ID+WSAG +L LL G P F +S I++ L
Sbjct: 184 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 243
Query: 270 -----------------IDFKRDPW-----PNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
K PW P A +L ++LE P RLT +
Sbjct: 244 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 303
Query: 308 HPWLQNAKKAPNVPLGD 324
H + + PNV L +
Sbjct: 304 HSFFDELRD-PNVKLPN 319
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 132/308 (42%), Gaps = 54/308 (17%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI----DDVRREVA 103
++ D Y + +G G +GV R L + ++ +K+ A D+ RE+
Sbjct: 52 DVGDEYEIIETIGNGAYGVV-----SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 106
Query: 104 IMKHLPKNSSIVSLKEACEDD------NAVHLVMELCEGGELFDRIVARGHYTERAAAAV 157
I+KH K+ +I+++K+ +V++V++L E +L I + T
Sbjct: 107 ILKHF-KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYF 164
Query: 158 TRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPGER---FS 212
++ ++ H VIHRDLKP N L EN LK DFG++ + P E +
Sbjct: 165 LYQLLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMT 221
Query: 213 EIVGSPYYMAPEVLK--RNYGPEIDIWSAGVI---------------------LYILLCG 249
E V + +Y APE++ Y ID+WS G I L +++ G
Sbjct: 222 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 281
Query: 250 VPPFWAESEQGV--AQAILRGLIDFKRDPW----PNVSESAKSLVRQMLEPDPKLRLTAK 303
P G +A ++ L + PW P A SL+ +ML +P R++A
Sbjct: 282 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAA 341
Query: 304 QVLEHPWL 311
L HP+L
Sbjct: 342 AALRHPFL 349
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 125/259 (48%), Gaps = 27/259 (10%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVS 116
R +G G +G D R+ +A K +S R ++ + RE+ ++KHL K+ +++
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHL-KHENVIG 91
Query: 117 LKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
L + + ED + V+LV L G + IV ++ + ++ ++ H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKR-- 228
G+IHRDLKP N E+S L+ +DFGL+ + E + V + +Y APE++
Sbjct: 150 AGIIHRDLKPSNVAV---NEDSELRILDFGLA--RQADEEMTGYVATRWYRAPEIMLNWM 204
Query: 229 NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV-----SES 283
+Y +DIWS G I+ LL G F + Q L+ +++ P P V SE
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALF--PGSDYIDQ--LKRIMEVVGTPSPEVLAKISSEH 260
Query: 284 AKSLVRQMLEPDPKLRLTA 302
A++ + Q L P P+ L++
Sbjct: 261 ARTYI-QSLPPMPQKDLSS 278
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 40/239 (16%)
Query: 41 LAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR 100
G+ ++ D Y++ +GRG +G YL D++T + +A K ++ R +D + R
Sbjct: 16 FQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN-RMFEDLIDCKRILR 74
Query: 101 EVAIMKHLPKNSSIVSLKEACEDDNA-----VHLVMELCEGG--ELFDRIVARGHYTERA 153
E+ I+ L K+ I+ L + D+ +++V+E+ + +LF + TE
Sbjct: 75 EITILNRL-KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEEH 130
Query: 154 AAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF-------- 205
+ ++ H+ G+IHRDLKP N L ++ +K DFGL+
Sbjct: 131 IKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNI 187
Query: 206 --------KPG-------ERFSEIVGSPYYMAPE--VLKRNYGPEIDIWSAGVILYILL 247
+PG ++ + V + +Y APE +L+ NY IDIWS G I LL
Sbjct: 188 VNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 28/40 (70%)
Query: 277 WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
+P++S+ +L+ ML+ +P R+T Q L+HP+L++ +K
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 80
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 138
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXI 255
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 316 YYDPSDEPIAE 326
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 80
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 138
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXI 255
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 316 YYDPSDEPIAE 326
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 132/319 (41%), Gaps = 53/319 (16%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAI 104
P E Y + +G G FGV Y D+ EL+A K + + K RE+ I
Sbjct: 14 PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQI 66
Query: 105 MKHLPKNSSIVSLK----EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
M+ L + +IV L+ + E + V+L + L R VAR + + V
Sbjct: 67 MRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYR-VARHYSRAKQTLPVIYV 124
Query: 161 IVEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+ + QL H G+ HRD+KP+N L + + LK DFG + GE
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 215 VGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAI------- 265
+ S YY APE++ +Y ID+WSAG +L LL G P F +S GV Q +
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLG 240
Query: 266 ------LR---------GLIDFKRDPW-----PNVSESAKSLVRQMLEPDPKLRLTAKQV 305
+R K PW P A +L ++LE P RLT +
Sbjct: 241 TPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
Query: 306 LEHPWLQNAKKAPNVPLGD 324
H + + PNV L +
Sbjct: 301 CAHSFFDELRD-PNVKLPN 318
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 38/285 (13%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
D + + + +GRG F + + T ++ A K ++K + ++ R E ++ + +
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTR----TIVEVVQ 166
I L A +D+N ++LVME GG+L + G ER A + R IV +
Sbjct: 121 RW-ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAID 176
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIV--GSPYYMAPE 224
H+ G +HRD+KP+N L ++ DFG + + +V G+P Y++PE
Sbjct: 177 SVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPE 233
Query: 225 VLK--------RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR-------GL 269
+L+ +YGPE D W+ GV Y + G PF+A+S I+ L
Sbjct: 234 ILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPL 293
Query: 270 IDFKRDPWPNVSESAKSLVRQMLEPDPKLRL---TAKQVLEHPWL 311
+D V E A+ ++++L P P+ RL A HP+
Sbjct: 294 VD------EGVPEEARDFIQRLLCP-PETRLGRGGAGDFRTHPFF 331
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 84
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 142
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 320 YYDPSDEPIAE 330
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 80
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 138
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 316 YYDPSDEPIAE 326
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 26/241 (10%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G+G FG + R T + +A K + + I +R E+ I++ L K+ ++V+L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL-KHENVVNL 82
Query: 118 KEACEDD--------NAVHLVMELCE---GGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
E C +++LV + CE G L + +V +T V + ++ +
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLY 139
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-----RFSEIVGSPYYM 221
H++ ++HRD+K N L + LK DFGL+ F + R+ V + +Y
Sbjct: 140 YIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 222 APEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN 279
PE+L +R+YGP ID+W AG I+ + P +EQ I + + WPN
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 280 V 280
V
Sbjct: 257 V 257
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQ--RTLREIKILLRF-RH 84
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 142
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 320 YYDPSDEPIAE 330
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 130/323 (40%), Gaps = 69/323 (21%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR---REVAIMK- 106
DR+ V+R G+G FG L ++ T +A K + I D R RE+ IM+
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV----------IQDPRFRNRELQIMQD 72
Query: 107 ----HLPK----NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVT 158
H P S +L E D +++VME + R R +Y + A
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHR-CCRNYYRRQVAPPPI 129
Query: 159 RTIVEVVQLCHKHG--------VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER 210
V + QL G V HRD+KP N L + + LK DFG + P E
Sbjct: 130 LIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV--NEADGTLKLCDFGSAKKLSPSEP 187
Query: 211 FSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR- 267
+ S YY APE++ ++Y +DIWS G I ++ G P F ++ G I+R
Sbjct: 188 NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247
Query: 268 -------------------GLIDFKRDPWPNV--------SESAKSLVRQMLEPDPKLRL 300
L + K PW NV ++ A L+ +L+ P+ R+
Sbjct: 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERM 307
Query: 301 TAKQVLEHPWLQN----AKKAPN 319
+ L HP+ A K PN
Sbjct: 308 KPYEALCHPYFDELHDPATKLPN 330
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 88
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 89 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 146
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 147 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 203
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 204 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 263
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 264 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 324 YYDPSDEPIAE 334
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 80
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 138
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 316 YYDPSDEPIAE 326
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 127/309 (41%), Gaps = 52/309 (16%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
++ RY+ + LG G G+ + +D D + +A K I L + RE+ I++
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV---LTDPQSVKHALREIKIIRR 64
Query: 108 L-------------PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAA 154
L P S + + + N+V++V E E ++ +G E A
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEEHA 122
Query: 155 AAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE----R 210
++ ++ H V+HRDLKP N LF N E+ LK DFGL+ P
Sbjct: 123 RLFMYQLLRGLKYIHSANVLHRDLKPAN-LFINT-EDLVLKIGDFGLARIMDPHYSHKGH 180
Query: 211 FSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRG 268
SE + + +Y +P +L NY ID+W+AG I +L G F E Q IL
Sbjct: 181 LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES 240
Query: 269 L----------------IDFKRDP----------WPNVSESAKSLVRQMLEPDPKLRLTA 302
+ + + D P +S A + Q+L P RLTA
Sbjct: 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTA 300
Query: 303 KQVLEHPWL 311
++ L HP++
Sbjct: 301 EEALSHPYM 309
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y+ +G G +G ID+ + E +A K +S R ++ + RE+ ++KH+ ++
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKHM-QHE 101
Query: 113 SIVSLKEACEDDNAV------HLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+++ L + +++ +LVM + +I+ ++E + +++ ++
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGM-EFSEEKIQYLVYQMLKGLK 158
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL 226
H GV+HRDLKP N L N E+ LK +DFGL+ + V + +Y APEV+
Sbjct: 159 YIHSAGVVHRDLKPGN-LAVN--EDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVI 213
Query: 227 KR--NYGPEIDIWSAGVILYILLCG---------------------VP--PFWAESEQGV 261
+Y +DIWS G I+ +L G VP F +
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 273
Query: 262 AQAILRGLIDFKR----DPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
A++ ++ L R +P S A L+ +MLE D RLTA Q L HP+ +
Sbjct: 274 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 82
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 140
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 318 YYDPSDEPIAE 328
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 26/241 (10%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G+G FG + R T + +A K + + I +R E+ I++ L K+ ++V+L
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL-KHENVVNL 81
Query: 118 KEACEDD--------NAVHLVMELCE---GGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
E C +++LV + CE G L + +V +T V + ++ +
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLY 138
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-----RFSEIVGSPYYM 221
H++ ++HRD+K N L + LK DFGL+ F + R+ V + +Y
Sbjct: 139 YIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 222 APEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN 279
PE+L +R+YGP ID+W AG I+ + P +EQ I + + WPN
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 255
Query: 280 V 280
V
Sbjct: 256 V 256
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+S LK +DFGL + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLC--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 26/241 (10%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G+G FG + R T + +A K + + I +R E+ I++ L K+ ++V+L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL-KHENVVNL 82
Query: 118 KEACEDD--------NAVHLVMELCE---GGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
E C +++LV + CE G L + +V +T V + ++ +
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLY 139
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-----RFSEIVGSPYYM 221
H++ ++HRD+K N L + LK DFGL+ F + R+ V + +Y
Sbjct: 140 YIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 222 APEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN 279
PE+L +R+YGP ID+W AG I+ + P +EQ I + + WPN
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 280 V 280
V
Sbjct: 257 V 257
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 26 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 84
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 85 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+S LK +DFGL+ + + V + +Y A
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLA--RHTDDEMTGYVATRWYRA 196
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 317 YHDPDDEPVAD 327
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 125/259 (48%), Gaps = 27/259 (10%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVS 116
R +G G +G D R+ +A K +S R ++ + RE+ ++KHL K+ +++
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHL-KHENVIG 91
Query: 117 LKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
L + + ED + V+LV L G + IV ++ + ++ ++ H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKR-- 228
G+IHRDLKP N E+S L+ +DFGL+ + E + V + +Y APE++
Sbjct: 150 AGIIHRDLKPSNVAV---NEDSELRILDFGLA--RQADEEMTGYVATRWYRAPEIMLNWM 204
Query: 229 NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV-----SES 283
+Y +DIWS G I+ LL G F + Q L+ +++ P P V SE
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALF--PGSDYIDQ--LKRIMEVVGTPSPEVLAKISSEH 260
Query: 284 AKSLVRQMLEPDPKLRLTA 302
A++ + Q L P P+ L++
Sbjct: 261 ARTYI-QSLPPMPQKDLSS 278
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 134/315 (42%), Gaps = 46/315 (14%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
++ RY +G G +G+ D + +A K IS + +T RE+ I+
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLREIKILLR 97
Query: 108 LPKNSSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
++ +I+ + + E V++V +L E +L+ +++ H + I+
Sbjct: 98 F-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 154
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSP 218
++ H V+HRDLKP N L + LK DFGL+ P +E V +
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 219 YYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAI 265
+Y APE++ + Y IDIWS G IL +L P F + G+ +Q
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 271
Query: 266 LRGLIDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHP 309
L +I+ K + PW PN A L+ +ML +P R+ +Q L HP
Sbjct: 272 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 331
Query: 310 WLQNAKKAPNVPLGD 324
+L+ + P+ +
Sbjct: 332 YLEQYYDPSDEPIAE 346
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 80
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 138
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 316 YYDPSDEPIAE 326
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 80
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 81 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+S LK +DFGL+ + + V + +Y A
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLA--RHTDDEMTGYVATRWYRA 192
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 313 YHDPDDEPVAD 323
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 130/311 (41%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLREIKILLAF-RH 82
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 140
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L S LK DFGL+ P +E V + +Y A
Sbjct: 141 YIHSANVLHRDLKPSNLLL---NTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPF----------------WAESEQGV--- 261
PE++ + Y IDIWS G IL +L P F + S++ +
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCG 257
Query: 262 ----AQAILRGLIDFKRDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
A+ L L + PW PN A L+ +ML +P R+ +Q L HP+L
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 318 YYDPSDEPIAE 328
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 85
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 143
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 144 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 200
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 321 YYDPSDEPIAE 331
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 86
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 87 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 144
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 145 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 201
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 261
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 262 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 322 YYDPSDEPIAE 332
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 77
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 78 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 135
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 136 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 192
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 252
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 253 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 313 YYDPSDEPIAE 323
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 84
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 142
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 320 YYDPSDEPIAE 330
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 78
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 136
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 137 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 253
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 314 YYDPSDEPIAE 324
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 26/241 (10%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G+G FG + R T + +A K + + I +R E+ I++ L K+ ++V+L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL-KHENVVNL 82
Query: 118 KEACEDDNA--------VHLVMELCE---GGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
E C + ++LV + CE G L + +V +T V + ++ +
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLY 139
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE-----RFSEIVGSPYYM 221
H++ ++HRD+K N L + LK DFGL+ F + R+ V + +Y
Sbjct: 140 YIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 222 APEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN 279
PE+L +R+YGP ID+W AG I+ + P +EQ I + + WPN
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 280 V 280
V
Sbjct: 257 V 257
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y+ +G G +G ID+ + E +A K +S R ++ + RE+ ++KH+ ++
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKHM-QHE 83
Query: 113 SIVSLKEACEDDNAV------HLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+++ L + +++ +LVM + +I+ ++E + +++ ++
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGL-KFSEEKIQYLVYQMLKGLK 140
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL 226
H GV+HRDLKP N L N E+ LK +DFGL+ + V + +Y APEV+
Sbjct: 141 YIHSAGVVHRDLKPGN-LAVN--EDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVI 195
Query: 227 KR--NYGPEIDIWSAGVILYILLCG---------------------VP--PFWAESEQGV 261
+Y +DIWS G I+ +L G VP F +
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 255
Query: 262 AQAILRGLIDFKR----DPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
A++ ++ L R +P S A L+ +MLE D RLTA Q L HP+ +
Sbjct: 256 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 14/270 (5%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
+ V R +GRG FG Y C DT ++ A K + K++++ E ++ +
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 113 S--IVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
IV + A + + +++L GG+L + G ++E I+ ++ H
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 309
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRN- 229
V++RDLKP N L E+ ++ D GL+ F + + VG+ YMAPEVL++
Sbjct: 310 RFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGV 365
Query: 230 -YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLV 288
Y D +S G +L+ LL G PF + I R + + + S +SL+
Sbjct: 366 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPELRSLL 424
Query: 289 RQMLEPDPKLRL-----TAKQVLEHPWLQN 313
+L+ D RL A++V E P+ ++
Sbjct: 425 EGLLQRDVNRRLGCLGRGAQEVKESPFFRS 454
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 14/270 (5%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
+ V R +GRG FG Y C DT ++ A K + K++++ E ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 113 S--IVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
IV + A + + +++L GG+L + G ++E I+ ++ H
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRN- 229
V++RDLKP N L E+ ++ D GL+ F + + VG+ YMAPEVL++
Sbjct: 311 RFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGV 366
Query: 230 -YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLV 288
Y D +S G +L+ LL G PF + I R + + + S +SL+
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPELRSLL 425
Query: 289 RQMLEPDPKLRL-----TAKQVLEHPWLQN 313
+L+ D RL A++V E P+ ++
Sbjct: 426 EGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 26/226 (11%)
Query: 47 ENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMK 106
E DRY +D +G+G FG DR +E +A K I +K ++ + EV +++
Sbjct: 31 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLE 86
Query: 107 HLPKNSS-----IVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTI 161
+ K+ + IV LK N + LV E+ L+D + R + +TR
Sbjct: 87 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYD--LLRNTNFRGVSLNLTRKF 143
Query: 162 VEVVQLCH--------KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE 213
+ Q+C + +IH DLKPEN L N K S +K +DFG S + G+R +
Sbjct: 144 AQ--QMCTALLFLATPELSIIHCDLKPENILLCNPKR-SAIKIVDFGSSC--QLGQRIYQ 198
Query: 214 IVGSPYYMAPEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESE 258
+ S +Y +PEV L Y ID+WS G IL + G P F +E
Sbjct: 199 XIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 129/311 (41%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 78
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 136
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 137 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAI-----------LRGL 269
PE++ + Y IDIWS G IL +L P F + I L +
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCI 253
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 314 YYDPSDEPIAE 324
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 26/226 (11%)
Query: 47 ENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMK 106
E DRY +D +G+G FG DR +E +A K I +K ++ + EV +++
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLE 105
Query: 107 HLPKNSS-----IVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTI 161
+ K+ + IV LK N + LV E+ L+D + R + +TR
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYD--LLRNTNFRGVSLNLTRKF 162
Query: 162 VEVVQLCH--------KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE 213
+ Q+C + +IH DLKPEN L N K S +K +DFG S + G+R +
Sbjct: 163 AQ--QMCTALLFLATPELSIIHCDLKPENILLCNPKR-SAIKIVDFGSSC--QLGQRIYQ 217
Query: 214 IVGSPYYMAPEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESE 258
+ S +Y +PEV L Y ID+WS G IL + G P F +E
Sbjct: 218 XIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 133/302 (44%), Gaps = 39/302 (12%)
Query: 50 EDRYLVDRELGRGEFGVTYLCID-RDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +Y E+G G +G + D ++ +A K + + + + +R EVA+++HL
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHL 68
Query: 109 P--KNSSIVSLKEAC-----EDDNAVHLVMELCEG--GELFDRIVARGHYTERAAAAVTR 159
++ ++V L + C + + + LV E + D++ G TE + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY 219
++ + H H V+HRDLKP+N L + + +K DFGL+ + + +V + +
Sbjct: 129 -LLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLW 184
Query: 220 YMAPEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
Y APEV L+ +Y +D+WS G I + P F S+ IL + + WP
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 279 -----------------------NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAK 315
++ E K L+ + L +P R++A L HP+ Q+ +
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304
Query: 316 KA 317
+
Sbjct: 305 RC 306
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMAGFVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 141/337 (41%), Gaps = 49/337 (14%)
Query: 23 HDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACK 82
H H+++ +++ + VP +RY +G G +G D T +A K
Sbjct: 5 HHHSQERPTFYRQELNKTIWEVP-----ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVK 59
Query: 83 SISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKE------ACEDDNAVHLVMELCEG 136
+S R ++ + RE+ ++KH+ K+ +++ L + + E+ N V+LV L G
Sbjct: 60 KLS-RPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 116
Query: 137 GELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKA 196
+L + IV T+ + I+ ++ H +IHRDLKP N E+ LK
Sbjct: 117 ADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKI 172
Query: 197 IDFGLSIFFKPGERFSEIVGSPYYMAPEVLKR--NYGPEIDIWSAGVILYILLCGVPPFW 254
+DFGL+ + + V + +Y APE++ +Y +DIWS G I+ LL G F
Sbjct: 173 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
Query: 255 AESEQGVAQAILR-----------------------GLIDFKRDPWPNV----SESAKSL 287
+ ILR L + + NV + A L
Sbjct: 231 GTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDL 290
Query: 288 VRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGD 324
+ +ML D R+TA Q L H + + P+ D
Sbjct: 291 LEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 327
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 142/321 (44%), Gaps = 49/321 (15%)
Query: 42 AGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRRE 101
A VP +D Y + R+LGRG++ + I+ E + K + K + RE
Sbjct: 29 AHVPSWGNQDDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIK------RE 82
Query: 102 VAIMKHLPKNSSIVSLKEACED--DNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTR 159
V I+++L ++I+ L + +D LV E + F ++ T+
Sbjct: 83 VKILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTD-FKQLYQI--LTDFDIRFYMY 139
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY 219
+++ + CH G++HRD+KP N + ++++ L+ ID+GL+ F+ P + ++ V S Y
Sbjct: 140 ELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYNVRVASRY 197
Query: 220 YMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG------ 268
+ PE+L + Y +D+WS G +L ++ PF+ +Q V A + G
Sbjct: 198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYG 257
Query: 269 ----------------LIDFKRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAK 303
L R W N VS A L+ ++L D + RLTAK
Sbjct: 258 YLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK 317
Query: 304 QVLEHPWLQNAKKAPNVPLGD 324
+ +EHP+ K + P D
Sbjct: 318 EAMEHPYFYPVVKEQSQPSAD 338
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 14/270 (5%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
+ V R +GRG FG Y C DT ++ A K + K++++ E ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 113 S--IVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
IV + A + + +++L GG+L + G ++E I+ ++ H
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRN- 229
V++RDLKP N L E+ ++ D GL+ F + + VG+ YMAPEVL++
Sbjct: 311 RFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGV 366
Query: 230 -YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLV 288
Y D +S G +L+ LL G PF + I R + + + S +SL+
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPELRSLL 425
Query: 289 RQMLEPDPKLRL-----TAKQVLEHPWLQN 313
+L+ D RL A++V E P+ ++
Sbjct: 426 EGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 14/270 (5%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
+ V R +GRG FG Y C DT ++ A K + K++++ E ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 113 S--IVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
IV + A + + +++L GG+L + G ++E I+ ++ H
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRN- 229
V++RDLKP N L E+ ++ D GL+ F + + VG+ YMAPEVL++
Sbjct: 311 RFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGV 366
Query: 230 -YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLV 288
Y D +S G +L+ LL G PF + I R + + + S +SL+
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPELRSLL 425
Query: 289 RQMLEPDPKLRL-----TAKQVLEHPWLQN 313
+L+ D RL A++V E P+ ++
Sbjct: 426 EGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 84
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKCQHLSNDHICYFLYQILRGLK 142
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 320 YYDPSDEPIAE 330
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 122/300 (40%), Gaps = 38/300 (12%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP-- 109
RY E+G G +G Y D + +A KS+ + I VR EVA+++ L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAF 63
Query: 110 KNSSIVSLKEACEDDNA-----VHLVMELCEGG--ELFDRIVARGHYTERAAAAVTRTIV 162
++ ++V L + C V LV E + D+ G E + R +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFL 122
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
+ H + ++HRDLKPEN L + +K DFGL+ + + +V + +Y A
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALAPVVVTLWYRA 179
Query: 223 PEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW---- 277
PEV L+ Y +D+WS G I + P F SE I + D W
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 239
Query: 278 -------------------PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAP 318
P + ES L+ +ML +P R++A + L+H +L + P
Sbjct: 240 SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 84
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 142
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFS----EIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P + E V + +Y A
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLXEXVATRWYRA 199
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 320 YYDPSDEPIAE 330
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLREIKILLRF-RH 85
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 143
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFS----EIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P + E V + +Y A
Sbjct: 144 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLXEXVATRWYRA 200
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 321 YYDPSDEPIAE 331
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A + IS + +T RE+ I+ ++
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQ--RTLREIKILLRF-RH 84
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 142
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 320 YYDPSDEPIAE 330
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMAGFVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 130/294 (44%), Gaps = 39/294 (13%)
Query: 58 ELGRGEFGVTYLCID-RDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP--KNSSI 114
E+G G +G + D ++ +A K + + + + +R EVA+++HL ++ ++
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETFEHPNV 76
Query: 115 VSLKEAC-----EDDNAVHLVMELCEG--GELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
V L + C + + + LV E + D++ G TE + + ++ +
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LLRGLDF 135
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV-L 226
H H V+HRDLKP+N L + + +K DFGL+ + + +V + +Y APEV L
Sbjct: 136 LHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP-------- 278
+ +Y +D+WS G I + P F S+ IL + + WP
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQ 252
Query: 279 ---------------NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKA 317
++ E K L+ + L +P R++A L HP+ Q+ ++
Sbjct: 253 AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 306
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 131/311 (42%), Gaps = 46/311 (14%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY +G G +G+ D + +A K IS + +T RE+ I+ ++
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLREIKILLAF-RH 82
Query: 112 SSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+I+ + + E V++V +L E +L+ +++ H + I+ ++
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQILRGLK 140
Query: 167 LCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER----FSEIVGSPYYMA 222
H V+HRDLKP N L + LK DFGL+ P +E V + +Y A
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESE-------QGV----AQAILRGL 269
PE++ + Y IDIWS G IL +L P F + G+ +Q L +
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 270 IDFK------------RDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
I+ K + PW PN A L+ +ML +P R+ +Q L HP+L
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
Query: 314 AKKAPNVPLGD 324
+ P+ +
Sbjct: 318 YYDPSDEPIAE 328
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 39 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 97
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 98 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 154
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 155 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 209
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 269
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 270 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 330 YHDPDDEPVAD 340
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 74
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 75 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCAKLTDDHVQFLIYQIL 131
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 186
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 307 YHDPDDEPVAD 317
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 141/337 (41%), Gaps = 49/337 (14%)
Query: 23 HDHARKEAGANKKQPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACK 82
H H+++ +++ + VP +RY +G G +G D T +A K
Sbjct: 5 HHHSQERPTFYRQELNKTIWEVP-----ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK 59
Query: 83 SISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKE------ACEDDNAVHLVMELCEG 136
+S R ++ + RE+ ++KH+ K+ +++ L + + E+ N V+LV L G
Sbjct: 60 KLS-RPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 116
Query: 137 GELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKA 196
+L + IV T+ + I+ ++ H +IHRDLKP N E+ LK
Sbjct: 117 ADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKI 172
Query: 197 IDFGLSIFFKPGERFSEIVGSPYYMAPEVLKR--NYGPEIDIWSAGVILYILLCGVPPFW 254
+DFGL+ + + V + +Y APE++ +Y +DIWS G I+ LL G F
Sbjct: 173 LDFGLA--RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
Query: 255 AESEQGVAQAILR-----------------------GLIDFKRDPWPNV----SESAKSL 287
+ ILR L + + NV + A L
Sbjct: 231 GTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDL 290
Query: 288 VRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGD 324
+ +ML D R+TA Q L H + + P+ D
Sbjct: 291 LEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 327
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 40 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 98
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 99 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 210
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 271 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 331 YHDPDDEPVAD 341
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 85
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 86 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 142
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTADEMTGYVATRWYRA 197
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 318 YHDPDDEPVAD 328
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 85
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 86 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 142
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTADEMTGYVATRWYRA 197
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 318 YHDPDDEPVAD 328
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 121/300 (40%), Gaps = 38/300 (12%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP-- 109
RY E+G G +G Y D + +A KS+ + I VR EVA+++ L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAF 63
Query: 110 KNSSIVSLKEACEDDNA-----VHLVMELCEGG--ELFDRIVARGHYTERAAAAVTRTIV 162
++ ++V L + C V LV E + D+ G E + R +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFL 122
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
+ H + ++HRDLKPEN L + +K DFGL+ + +V + +Y A
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALDPVVVTLWYRA 179
Query: 223 PEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW---- 277
PEV L+ Y +D+WS G I + P F SE I + D W
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 239
Query: 278 -------------------PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAP 318
P + ES L+ +ML +P R++A + L+H +L + P
Sbjct: 240 SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 30 VPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 88
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 89 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 145
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 146 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 200
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 260
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 261 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 320
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 321 YHDPDDEPVAD 331
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 25 VPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 83
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 84 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 140
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLA--RHTDDEMTGYVATRWYRA 195
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 316 YHDPDDEPVAD 326
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 74
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 75 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 131
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMAGFVATRWYRA 186
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 307 YHDPDDEPVAD 317
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 85
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 86 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTADEMTGYVATRWYRA 197
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 318 YHDPDDEPVAD 328
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 26/226 (11%)
Query: 47 ENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMK 106
E DRY +D +G+G FG DR +E +A K I +K ++ + EV +++
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLE 105
Query: 107 HLPKNSS-----IVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTI 161
+ K+ + IV LK N + LV E+ L+D + R + +TR
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYD--LLRNTNFRGVSLNLTRKF 162
Query: 162 VEVVQLCH--------KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE 213
+ Q+C + +IH DLKPEN L N K + +K +DFG S + G+R +
Sbjct: 163 AQ--QMCTALLFLATPELSIIHCDLKPENILLCNPKRXA-IKIVDFGSSC--QLGQRIYQ 217
Query: 214 IVGSPYYMAPEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESE 258
+ S +Y +PEV L Y ID+WS G IL + G P F +E
Sbjct: 218 XIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
I++ + CH G++HRD+KP N + + E+ L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 221 MAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF 272
PE+L + Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 273 -------------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
R W VS A + ++L D + RLTA++
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 305 VLEHPWLQNAKKAPNVPLGD 324
+EHP+ K + P D
Sbjct: 318 AMEHPYFYPVVKEQSQPCAD 337
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 32 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 90
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 91 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 147
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 148 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 202
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 323 YHDPDDEPVAD 333
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 31 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 89
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 90 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 146
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 147 RGLKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLA--RHTDDEMTGYVATRWYRA 201
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 261
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 262 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 322 YHDPDDEPVAD 332
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 32 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 90
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 91 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 147
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 148 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 202
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 323 YHDPDDEPVAD 333
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 31 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 89
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 90 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 146
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 147 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 201
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 261
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 262 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 322 YHDPDDEPVAD 332
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 74
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 75 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 131
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 186
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 307 YHDPDDEPVAD 317
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 25/271 (9%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
ELG G GV + + + ++A K I +++ A+ + + RE+ ++ H + IV
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE-VVQLCHKHGVIHR 176
A D + + ME +GG L + G E+ V+ +++ + L KH ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF----SEIVGSPYYMAPEVLK-RNYG 231
D+KP N L ++ E +K DFG+S G+ + VG+ YM+PE L+ +Y
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 232 PEIDIWSAGVILYILLCG---VPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSL- 287
+ DIWS G+ L + G +PP A+ + AI L +P P + SL
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLE 241
Query: 288 ----VRQMLEPDPKLRLTAKQVLEHPWLQNA 314
V + L +P R KQ++ H +++ +
Sbjct: 242 FQDFVNKCLIKNPAERADLKQLMVHAFIKRS 272
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 26 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 84
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 85 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 141
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 196
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 317 YHDPDDEPVAD 327
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 25 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 83
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 84 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 140
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLA--RHTDDEMTGYVATRWYRA 195
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 316 YHDPDDEPVAD 326
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 80
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 81 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 192
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 313 YHDPDDEPVAD 323
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 80
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 81 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 192
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 313 YHDPDDEPVAD 323
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 121/300 (40%), Gaps = 38/300 (12%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP-- 109
RY E+G G +G Y D + +A KS+ + I VR EVA+++ L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAF 63
Query: 110 KNSSIVSLKEACEDDNA-----VHLVMELCEGG--ELFDRIVARGHYTERAAAAVTRTIV 162
++ ++V L + C V LV E + D+ G E + R +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFL 122
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
+ H + ++HRDLKPEN L + +K DFGL+ + +V + +Y A
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALFPVVVTLWYRA 179
Query: 223 PEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW---- 277
PEV L+ Y +D+WS G I + P F SE I + D W
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 239
Query: 278 -------------------PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAP 318
P + ES L+ +ML +P R++A + L+H +L + P
Sbjct: 240 SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 40 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 98
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 99 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 210
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 271 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 331 YHDPDDEPVAD 341
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 21/241 (8%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCID-RDTRELLACKSISKRKLRTAVDIDDVRREVAIMK 106
++ DRY + LG G +L D RD R++ A K + R RRE
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDV-AVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 107 HLPKNSSIVSLKEACEDDNAV----HLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
L + +IV++ + E + ++VME +G L D + G T + A V
Sbjct: 68 AL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSE---IVGSP 218
+ + H++G+IHRD+KP N + + + +K +DFG++ G ++ ++G+
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 219 YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y++PE + + D++S G +LY +L G PPF +S VA +R DP
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVR------EDPI 237
Query: 278 P 278
P
Sbjct: 238 P 238
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +SK ++ + RE+ ++KH+
Sbjct: 32 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSK-PFQSIIHAKRTYRELRLLKHM 90
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 91 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 147
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 148 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 202
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 323 YHDPDDEPVAD 333
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 25 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 83
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 84 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 140
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 195
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 316 YHDPDDEPVAD 326
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 19 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 77
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 78 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 134
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 135 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 189
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 249
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 250 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 309
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 310 YHDPDDEPVAD 320
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 85
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 86 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 142
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 197
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 318 YHDPDDEPVAD 328
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 21/241 (8%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCID-RDTRELLACKSISKRKLRTAVDIDDVRREVAIMK 106
++ DRY + LG G +L D RD R++ A K + R RRE
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDV-AVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 107 HLPKNSSIVSLKEACEDDNAV----HLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
L + +IV++ + E + ++VME +G L D + G T + A V
Sbjct: 68 AL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPG----ERFSEIVGSP 218
+ + H++G+IHRD+KP N L + + +K +DFG++ + + ++G+
Sbjct: 127 QALNFSHQNGIIHRDVKPANILIS---ATNAVKVVDFGIARAIADSGNSVXQTAAVIGTA 183
Query: 219 YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y++PE + + D++S G +LY +L G PPF +S VA +R DP
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPI 237
Query: 278 P 278
P
Sbjct: 238 P 238
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 39 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 97
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 98 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 154
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 155 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 209
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 269
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 270 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 330 YHDPDDEPVAD 340
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 43 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 101
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 102 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 158
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 159 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 213
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 273
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 274 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 334 YHDPDDEPVAD 344
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 25 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 83
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 84 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 140
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 195
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 316 YHDPDDEPVAD 326
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 22 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 80
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 81 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 192
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 313 YHDPDDEPVAD 323
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 8/149 (5%)
Query: 350 FLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGT 409
+LS E + + K F D+D G +S EL +R G + E+ +IE VD +G GT
Sbjct: 10 YLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGT 69
Query: 410 LDYGEFLAVLLHLRRMAND------EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDC 463
+D+ EFL ++ +R+M D E L + F FD++ +GYI+ EL + G
Sbjct: 70 IDFEEFLVMM--VRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVT 127
Query: 464 TDVANDIFQEVDTDKDGLISYDEFVAMMK 492
+ + ++ D + DG I +DEF+ MM+
Sbjct: 128 DEEIESLMKDGDKNNDGRIDFDEFLKMME 156
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 14/148 (9%)
Query: 380 KAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFD 439
+A R++ S+ +E + + D +G G + E V+ L + E L D
Sbjct: 4 QAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVD 63
Query: 440 KDGNGYIEPNE----LRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMMKTGT 495
+DG+G I+ E + + ED + + F+ D + DG I +E +
Sbjct: 64 EDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEI----- 118
Query: 496 DWRKASRHYSRGRFNSLSIKLMKDGSLN 523
+R + H + S LMKDG N
Sbjct: 119 -FRASGEHVTDEEIES----LMKDGDKN 141
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 128/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 40 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 98
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 99 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + V + +Y A
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMXGXVATRWYRA 210
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 271 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 331 YHDPDDEPVAD 341
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 124/259 (47%), Gaps = 27/259 (10%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVS 116
R +G G +G D R+ +A K +S R ++ + RE+ ++KHL K+ +++
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHL-KHENVIG 83
Query: 117 LKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHK 170
L + + ED + V+LV L G + IV ++ + ++ ++ H
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKR-- 228
G+IHRDLKP N E+ L+ +DFGL+ + E + V + +Y APE++
Sbjct: 142 AGIIHRDLKPSNVAV---NEDCELRILDFGLA--RQADEEMTGYVATRWYRAPEIMLNWM 196
Query: 229 NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV-----SES 283
+Y +DIWS G I+ LL G F + Q L+ +++ P P V SE
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGKALF--PGSDYIDQ--LKRIMEVVGTPSPEVLAKISSEH 252
Query: 284 AKSLVRQMLEPDPKLRLTA 302
A++ + Q L P P+ L++
Sbjct: 253 ARTYI-QSLPPMPQKDLSS 270
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGXVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 130/296 (43%), Gaps = 47/296 (15%)
Query: 52 RYLVDRE----LGRGEFGVTYLCIDRDTRELLACKSISKRKLR-TAVDIDDVRREVAIMK 106
RY D E LG+G FG R L + + +K+R T + + EV ++
Sbjct: 3 RYASDFEEIAVLGQGAFGQVV-----KARNALDSRYYAIKKIRHTEEKLSTILSEVMLLA 57
Query: 107 HLPKNSSI------------VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTER-A 153
L + V A + + + + ME CE G L+D I + +R
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 154 AAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK------- 206
+ R I+E + H G+IHRDLKP N +F ++ N +K DFGL+
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRDLKPMN-IFIDESRN--VKIGDFGLAKNVHRSLDILK 174
Query: 207 ------PG--ERFSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAE 256
PG + + +G+ Y+A EVL +Y +ID++S G+I + ++ PF
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231
Query: 257 SEQGVAQAILRGL-IDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
E+ LR + I+F D N + K ++R +++ DP R A+ +L WL
Sbjct: 232 MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 39/289 (13%)
Query: 58 ELGRGEFGVTYLCID-RDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP--KNSSI 114
E+G G +G + D ++ +A K + + + + +R EVA+++HL ++ ++
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETFEHPNV 76
Query: 115 VSLKEAC-----EDDNAVHLVMELCEG--GELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
V L + C + + + LV E + D++ G TE + + ++ +
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LLRGLDF 135
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV-L 226
H H V+HRDLKP+N L + + +K DFGL+ + + +V + +Y APEV L
Sbjct: 136 LHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP-------- 278
+ +Y +D+WS G I + P F S+ IL + + WP
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQ 252
Query: 279 ---------------NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
++ E K L+ + L +P R++A L HP+ Q
Sbjct: 253 AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E+ ++I+E F D+D G + ELK +R G + + E++ +I +D +G GT+
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 411 DYGEFLAVLL-HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ + + E + KAF FD D +G I +LR E G + + +
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQE 141
Query: 470 IFQEVDTDKDGLISYDEFVAMMK 492
+ E D + D I DEF+ +MK
Sbjct: 142 MIAEADRNDDNEIDEDEFIRIMK 164
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D DN+G +S+ EL +R+ G +E+EV L+ +D +G +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 411 DYGEFLAVLL-HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDV-AN 468
++ EFLA++ L+ +++ L +AF FDK+G+G I EL+ L G + TD +
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG-EKLTDAEVD 122
Query: 469 DIFQEVDTDKDGLISYDEFVAMM 491
D+ +EV +D G I+ +F A++
Sbjct: 123 DMLREV-SDGSGEINIQQFAALL 144
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 18 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 76
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 77 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 133
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 134 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 188
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 248
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 249 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 308
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 309 YHDPDDEPVAD 319
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 17 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 75
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 76 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 132
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 133 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 187
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 247
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 248 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 308 YHDPDDEPVAD 318
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 128/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 43 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 101
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 102 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 158
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + V + +Y A
Sbjct: 159 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMXGYVATRWYRA 213
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 273
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 274 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 334 YHDPDDEPVAD 344
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 137/305 (44%), Gaps = 49/305 (16%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
+D Y + R+LGRG++ + I+ E +A K + K + RE+ I+++L
Sbjct: 36 QDDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIK------REIKILENLR 89
Query: 110 KNSSIVSLKEACED--DNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
+I++L + +D LV E + F ++ T+ I++ +
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDY 146
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL- 226
CH G++HRD+KP N L + E+ L+ ID+GL+ F+ PG+ ++ V S Y+ PE+L
Sbjct: 147 CHSMGIMHRDVKPHNVLIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV 204
Query: 227 -KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF------- 272
+ Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 273 ------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
R W VS A + ++L D + RLTA++ +EHP+
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 312 QNAKK 316
K
Sbjct: 325 YTVVK 329
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 74
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 75 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 131
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 186
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 247 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 307 YHDPDDEPVAD 317
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 17 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 75
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 76 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 132
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 133 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 187
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 247
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 248 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 308 YHDPDDEPVAD 318
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 21/241 (8%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCID-RDTRELLACKSISKRKLRTAVDIDDVRREVAIMK 106
++ DRY + LG G +L D RD R++ A K + R RRE
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDV-AVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 107 HLPKNSSIVSLKEACEDDNAV----HLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
L + +IV++ + E + ++VME +G L D + G T + A V
Sbjct: 68 AL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSE---IVGSP 218
+ + H++G+IHRD+KP N + + + +K +DFG++ G ++ ++G+
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 219 YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW 277
Y++PE + + D++S G +LY +L G PPF +S VA +R DP
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPI 237
Query: 278 P 278
P
Sbjct: 238 P 238
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 8/149 (5%)
Query: 350 FLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGT 409
+LS E + + K F D+D G +S EL +R G + E+ +IE VD +G GT
Sbjct: 10 YLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGT 69
Query: 410 LDYGEFLAVLLHLRRMAND------EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDC 463
+D+ EFL ++ +R+M D E L + F FD++ +GYI+ EL + G
Sbjct: 70 IDFEEFLVMM--VRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVT 127
Query: 464 TDVANDIFQEVDTDKDGLISYDEFVAMMK 492
+ + ++ D + DG I +DEF+ MM+
Sbjct: 128 DEEIESLMKDGDKNNDGRIDFDEFLKMME 156
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 14/148 (9%)
Query: 380 KAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFD 439
+A R++ S+ +E + + D +G G + E V+ L + E L D
Sbjct: 4 QAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVD 63
Query: 440 KDGNGYIEPNE----LRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMMKTGT 495
+DG+G I+ E + + ED + ++F+ D + DG I +E +
Sbjct: 64 EDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEI----- 118
Query: 496 DWRKASRHYSRGRFNSLSIKLMKDGSLN 523
+R + H + S LMKDG N
Sbjct: 119 -FRASGEHVTDEEIES----LMKDGDKN 141
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +D+GL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDYGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
I++ + CH G++HRD+KP N + + E+ L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 221 MAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF 272
PE+L + Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 273 -------------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
R W VS A + ++L D + RLTA++
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 305 VLEHPWLQNAKK 316
+EHP+ K
Sbjct: 318 AMEHPYFYTVVK 329
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
I++ + CH G++HRD+KP N + + E+ L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 221 MAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF 272
PE+L + Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 273 -------------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
R W VS A + ++L D + RLTA++
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 305 VLEHPWLQNAKK 316
+EHP+ K
Sbjct: 318 AMEHPYFYTVVK 329
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 19/191 (9%)
Query: 314 AKKAPNVPLGDVVRSRLKQFSMMNRFKRKALRVI-AEFLSVEEVEDIKEMFKKIDSDNDG 372
K A LG+ +K+F + + A+ + ++ ++EE +++ ++F+++D++ DG
Sbjct: 1 GKHALTGALGN-----MKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDG 55
Query: 373 VVSTDELKAGLR-----------NFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLH 421
+ EL G R + S E+EV ++++VD + G ++Y EF+ V +
Sbjct: 56 QLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMD 115
Query: 422 LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGL 481
+ + + E L AF FD DG+G I EL DD T + + QE D + DG
Sbjct: 116 KQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDET--WHQVLQECDKNNDGE 173
Query: 482 ISYDEFVAMMK 492
+ ++EFV MM+
Sbjct: 174 VDFEEFVEMMQ 184
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
I++ + CH G++HRD+KP N + + E+ L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 221 MAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF 272
PE+L + Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 273 -------------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
R W VS A + ++L D + RLTA++
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 305 VLEHPWLQNAKK 316
+EHP+ K
Sbjct: 318 AMEHPYFYTVVK 329
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 49/308 (15%)
Query: 42 AGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRRE 101
A VP +D Y + R+LGRG++ + I+ E + K + K + RE
Sbjct: 34 AHVPSWGNQDDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIK------RE 87
Query: 102 VAIMKHLPKNSSIVSLKEACED--DNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTR 159
V I+++L ++I+ L + +D LV E + F ++ T+
Sbjct: 88 VKILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTD-FKQLYQI--LTDFDIRFYMY 144
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY 219
+++ + CH G++HRD+KP N + ++++ L+ ID+GL+ F+ P + ++ V S Y
Sbjct: 145 ELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYNVRVASRY 202
Query: 220 YMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG------ 268
+ PE+L + Y +D+WS G +L ++ PF+ +Q V A + G
Sbjct: 203 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYG 262
Query: 269 ----------------LIDFKRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAK 303
L R W N VS A L+ ++L D + RLTAK
Sbjct: 263 YLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK 322
Query: 304 QVLEHPWL 311
+ +EHP+
Sbjct: 323 EAMEHPYF 330
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
I++ + CH G++HRD+KP N + + E+ L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 221 MAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF 272
PE+L + Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 273 -------------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
R W VS A + ++L D + RLTA++
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 305 VLEHPWLQNAKK 316
+EHP+ K
Sbjct: 318 AMEHPYFYTVVK 329
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
I++ + CH G++HRD+KP N + + E+ L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 221 MAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF 272
PE+L + Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 256
Query: 273 -------------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
R W VS A + ++L D + RLTA++
Sbjct: 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316
Query: 305 VLEHPWLQNAKK 316
+EHP+ K
Sbjct: 317 AMEHPYFYTVVK 328
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
I++ + CH G++HRD+KP N + + E+ L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 221 MAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF 272
PE+L + Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 273 -------------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
R W VS A + ++L D + RLTA++
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 305 VLEHPWLQNAKK 316
+EHP+ K
Sbjct: 318 AMEHPYFYTVVK 329
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 371 DGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMAND-- 428
DG +ST EL +R G E+Q +I+ VD +G GT+D+ EFL +++ R M +D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV--RSMKDDSK 90
Query: 429 ----EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISY 484
E L F FDK+ +GYI+ EL+ L G D ++ ++ D + DG I Y
Sbjct: 91 GKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 485 DEFVAMMK 492
DEF+ MK
Sbjct: 151 DEFLEFMK 158
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
I++ + CH G++HRD+KP N + + E+ L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 221 MAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF 272
PE+L + Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 273 -------------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
R W VS A + ++L D + RLTA++
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 305 VLEHPWLQNAKK 316
+EHP+ K
Sbjct: 318 AMEHPYFYTVVK 329
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
I++ + CH G++HRD+KP N + + E+ L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 221 MAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF 272
PE+L + Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 273 -------------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
R W VS A + ++L D + RLTA++
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 305 VLEHPWLQNAKK 316
+EHP+ K
Sbjct: 318 AMEHPYFYTVVK 329
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 126/268 (47%), Gaps = 25/268 (9%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
ELG G GV + + + ++A K I +++ A+ + + RE+ ++ H + IV
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 88
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE-VVQLCHKHGVIHR 176
A D + + ME +GG L + G E+ V+ +++ + L KH ++HR
Sbjct: 89 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 148
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF----SEIVGSPYYMAPEVLK-RNYG 231
D+KP N L ++ E +K DFG+S G+ + VG+ YM+PE L+ +Y
Sbjct: 149 DVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYS 200
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSL---- 287
+ DIWS G+ L + G P + S + AI L +P P + SL
Sbjct: 201 VQSDIWSMGLSLVEMAVGRYPIGSGSG---SMAIFELLDYIVNEPPPKLPSGVFSLEFQD 257
Query: 288 -VRQMLEPDPKLRLTAKQVLEHPWLQNA 314
V + L +P R KQ++ H +++ +
Sbjct: 258 FVNKCLIKNPAERADLKQLMVHAFIKRS 285
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
I++ + CH G++HRD+KP N + + E+ L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 138 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 195
Query: 221 MAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF 272
PE+L + Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 196 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 255
Query: 273 -------------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
R W VS A + ++L D + RLTA++
Sbjct: 256 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 315
Query: 305 VLEHPWLQNAKK 316
+EHP+ K
Sbjct: 316 AMEHPYFYTVVK 327
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
I++ + CH G++HRD+KP N + + E+ L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 221 MAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF 272
PE+L + Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 256
Query: 273 -------------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
R W VS A + ++L D + RLTA++
Sbjct: 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316
Query: 305 VLEHPWLQNAKK 316
+EHP+ K
Sbjct: 317 AMEHPYFYTVVK 328
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 371 DGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMAND-- 428
DG +ST EL +R G E+Q +I+ VD +G GT+D+ EFL +++ R M +D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV--RSMKDDSK 90
Query: 429 ----EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISY 484
E L F FDK+ +GYI+ EL+ L G D ++ ++ D + DG I Y
Sbjct: 91 GKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 485 DEFVAMMK 492
DEF+ MK
Sbjct: 151 DEFLEFMK 158
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
I++ + CH G++HRD+KP N + + E+ L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 221 MAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF 272
PE+L + Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 273 -------------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
R W VS A + ++L D + RLTA++
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 305 VLEHPWLQNAKK 316
+EHP+ K
Sbjct: 318 AMEHPYFYTVVK 329
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 38/192 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
I++ + CH G++HRD+KP N + + E+ L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 145 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 202
Query: 221 MAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWA---ESEQGVAQAILRG---LIDF 272
PE+L + Y +D+WS G +L ++ PF+ +Q V A + G L D+
Sbjct: 203 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 262
Query: 273 -------------------KRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
R W VS A + ++L D + RLTA++
Sbjct: 263 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 322
Query: 305 VLEHPWLQNAKK 316
+EHP+ K
Sbjct: 323 AMEHPYFYTVVK 334
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 127/303 (41%), Gaps = 41/303 (13%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSI---SKRKLRTAVDIDDVRREVAIMKHL 108
RY E+G G +G Y D + +A KS+ + + I VR EVA+++ L
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVR-EVALLRRL 68
Query: 109 P--KNSSIVSLKEACEDDNA-----VHLVMELCEGG--ELFDRIVARGHYTERAAAAVTR 159
++ ++V L + C V LV E + D+ G E + R
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMR 127
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY 219
+ + H + ++HRDLKPEN L + +K DFGL+ + + +V + +
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALTPVVVTLW 184
Query: 220 YMAPEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAI--LRGLI---DFK 273
Y APEV L+ Y +D+WS G I + P F SE I L GL D+
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 244
Query: 274 RD------------------PWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAK 315
RD P + ES L+ +ML +P R++A + L+H +L +
Sbjct: 245 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304
Query: 316 KAP 318
P
Sbjct: 305 GNP 307
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 136/308 (44%), Gaps = 49/308 (15%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
+D Y V R++GRG++ + I+ + E C + ++ ++RE+ I+++L
Sbjct: 31 QDDYEVVRKVGRGKYSEVFEGINVNNNE--KCIIKILKPVKKKK----IKREIKILQNLX 84
Query: 110 KNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
+IV L + D ++ L+ E D V T+ +++ +
Sbjct: 85 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDY 141
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK 227
CH G++HRD+KP N + + E L+ ID+GL+ F+ PG+ ++ V S Y+ PE+L
Sbjct: 142 CHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 199
Query: 228 --RNYGPEIDIWSAGVILYILLCGVPPFWAESEQG-----VAQAI--------------- 265
++Y +D+WS G + ++ PF+ + +A+ +
Sbjct: 200 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 259
Query: 266 ----LRGLID-FKRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
L L+ R PW VS A + ++L D + RLTA + + HP+
Sbjct: 260 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 319
Query: 312 QNAKKAPN 319
Q + A N
Sbjct: 320 QQVRAAEN 327
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 130/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DF L+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFYLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
++ DRY + LG G +L D +A K + R RRE
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 108 LPKNSSIVSLKEACEDDNAV----HLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE 163
L + +IV++ + E + ++VME +G L D + G T + A V +
Sbjct: 69 L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSE---IVGSPY 219
+ H++G+IHRD+KP N + + + +K +DFG++ G ++ ++G+
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 220 YMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
Y++PE + + D++S G +LY +L G PPF +S VA +R DP P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIP 238
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 136/308 (44%), Gaps = 49/308 (15%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
+D Y V R++GRG++ + I+ + E C + ++ ++RE+ I+++L
Sbjct: 30 QDDYEVVRKVGRGKYSEVFEGINVNNNE--KCIIKILKPVKKKK----IKREIKILQNLX 83
Query: 110 KNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
+IV L + D ++ L+ E D V T+ +++ +
Sbjct: 84 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDY 140
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK 227
CH G++HRD+KP N + + E L+ ID+GL+ F+ PG+ ++ V S Y+ PE+L
Sbjct: 141 CHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 228 --RNYGPEIDIWSAGVILYILLCGVPPFWAESEQG-----VAQAI--------------- 265
++Y +D+WS G + ++ PF+ + +A+ +
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 266 ----LRGLID-FKRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
L L+ R PW VS A + ++L D + RLTA + + HP+
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
Query: 312 QNAKKAPN 319
Q + A N
Sbjct: 319 QQVRAAEN 326
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
++ DRY + LG G +L D +A K + R RRE
Sbjct: 26 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 85
Query: 108 LPKNSSIVSLKEACEDDNAV----HLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE 163
L + +IV++ + E + ++VME +G L D + G T + A V +
Sbjct: 86 L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 144
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSE---IVGSPY 219
+ H++G+IHRD+KP N + + + +K +DFG++ G ++ ++G+
Sbjct: 145 ALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 201
Query: 220 YMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
Y++PE + + D++S G +LY +L G PPF +S VA +R DP P
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIP 255
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 161/390 (41%), Gaps = 65/390 (16%)
Query: 38 ITVLA--GVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI 95
I VLA G E E Y + +G G FGV + ++ E+ K + ++ +
Sbjct: 25 IKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN---- 80
Query: 96 DDVRREVAIMKHLPKNSSIVSLKEAC------EDDNAVHLVMELCEGGELFDRIVARGHY 149
RE+ IM+ + K+ ++V LK +D+ ++LV+E E R A HY
Sbjct: 81 ----RELQIMR-IVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP--ETVYR--ASRHY 131
Query: 150 TERAAAAVTRTI-VEVVQL------CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS 202
+ I + + QL H G+ HRD+KP+N L + LK IDFG +
Sbjct: 132 AKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL--DPPSGVLKLIDFGSA 189
Query: 203 IFFKPGERFSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQG 260
GE + S YY APE++ NY IDIWS G ++ L+ G P F ES
Sbjct: 190 KILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID 249
Query: 261 VAQAILRGLIDFKRD--------------------PW-----PNVSESAKSLVRQMLEPD 295
I++ L R+ P+ P A L+ ++LE
Sbjct: 250 QLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYT 309
Query: 296 PKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVRSRLKQFSMMNRFKRKALRVIAEFLS--V 353
P RLTA + L HP+ + G+ ++ + + ++ L V + +S V
Sbjct: 310 PSARLTAIEALCHPFFDELRT------GEARMPNGRELPPLFNWTKEELSVRPDLISRLV 363
Query: 354 EEVEDIKEMFKKIDSDNDGVVSTDELKAGL 383
+ + + + + ID N + + LK L
Sbjct: 364 PQHAEAELLSRGIDVHNFQPIPLESLKVTL 393
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 28/263 (10%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
V+ +GRG FGV +C + + +A K I R A ++ R+++ + H +I
Sbjct: 12 VEEVVGRGAFGV--VCKAKWRAKDVAIKQIESESERKAFIVE--LRQLSRVNH----PNI 63
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARG-----HYTERAAAAVTRTIVEVVQLCH 169
V L AC N V LVME EGG L++ V G +YT A + + V H
Sbjct: 64 VKLYGACL--NPVCLVMEYAEGGSLYN--VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 170 K---HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL 226
+IHRDLKP N L + LK DFG + + + GS +MAPEV
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVF 175
Query: 227 K-RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW-PNVSESA 284
+ NY + D++S G+IL+ ++ PF + G A I+ + + R P N+ +
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRPPLIKNLPKPI 233
Query: 285 KSLVRQMLEPDPKLRLTAKQVLE 307
+SL+ + DP R + +++++
Sbjct: 234 ESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 136/308 (44%), Gaps = 49/308 (15%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
+D Y V R++GRG++ + I+ + E C + ++ ++RE+ I+++L
Sbjct: 30 QDDYEVVRKVGRGKYSEVFEGINVNNNE--KCIIKILKPVKKKK----IKREIKILQNLX 83
Query: 110 KNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
+IV L + D ++ L+ E D V T+ +++ +
Sbjct: 84 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDY 140
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK 227
CH G++HRD+KP N + + E L+ ID+GL+ F+ PG+ ++ V S Y+ PE+L
Sbjct: 141 CHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 228 --RNYGPEIDIWSAGVILYILLCGVPPFWAESEQG-----VAQAI--------------- 265
++Y +D+WS G + ++ PF+ + +A+ +
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 266 ----LRGLID-FKRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
L L+ R PW VS A + ++L D + RLTA + + HP+
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
Query: 312 QNAKKAPN 319
Q + A N
Sbjct: 319 QQVRAAEN 326
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 136/308 (44%), Gaps = 49/308 (15%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
+D Y V R++GRG++ + I+ + E C + ++ ++RE+ I+++L
Sbjct: 51 QDDYEVVRKVGRGKYSEVFEGINVNNNE--KCIIKILKPVKKKK----IKREIKILQNLX 104
Query: 110 KNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
+IV L + D ++ L+ E D V T+ +++ +
Sbjct: 105 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDY 161
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK 227
CH G++HRD+KP N + + E L+ ID+GL+ F+ PG+ ++ V S Y+ PE+L
Sbjct: 162 CHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 219
Query: 228 --RNYGPEIDIWSAGVILYILLCGVPPFWAESEQG-----VAQAI--------------- 265
++Y +D+WS G + ++ PF+ + +A+ +
Sbjct: 220 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIE 279
Query: 266 ----LRGLID-FKRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
L L+ R PW VS A + ++L D + RLTA + + HP+
Sbjct: 280 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 339
Query: 312 QNAKKAPN 319
Q + A N
Sbjct: 340 QQVRAAEN 347
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 28/263 (10%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
V+ +GRG FGV +C + + +A K I R A ++ R+++ + H +I
Sbjct: 13 VEEVVGRGAFGV--VCKAKWRAKDVAIKQIESESERKAFIVE--LRQLSRVNH----PNI 64
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARG-----HYTERAAAAVTRTIVEVVQLCH 169
V L AC N V LVME EGG L++ V G +YT A + + V H
Sbjct: 65 VKLYGACL--NPVCLVMEYAEGGSLYN--VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 170 K---HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL 226
+IHRDLKP N L + LK DFG + + + GS +MAPEV
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVF 176
Query: 227 K-RNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPW-PNVSESA 284
+ NY + D++S G+IL+ ++ PF + G A I+ + + R P N+ +
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRPPLIKNLPKPI 234
Query: 285 KSLVRQMLEPDPKLRLTAKQVLE 307
+SL+ + DP R + +++++
Sbjct: 235 ESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 371 DGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMAND-- 428
DG +ST EL +R G E+Q +I+ VD +G GT+D+ EFL +++ R M +D
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV--RCMKDDSK 90
Query: 429 ----EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISY 484
E L F FDK+ +GYI+ EL+ L G D ++ ++ D + DG I Y
Sbjct: 91 GKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 485 DEFVAMMK 492
DEF+ MK
Sbjct: 151 DEFLEFMK 158
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 136/308 (44%), Gaps = 49/308 (15%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
+D Y V R++GRG++ + I+ + E C + ++ ++RE+ I+++L
Sbjct: 30 QDDYEVVRKVGRGKYSEVFEGINVNNNE--KCIIKILKPVKKKK----IKREIKILQNLX 83
Query: 110 KNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
+IV L + D ++ L+ E D V T+ +++ +
Sbjct: 84 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDY 140
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK 227
CH G++HRD+KP N + + E L+ ID+GL+ F+ PG+ ++ V S Y+ PE+L
Sbjct: 141 CHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 228 --RNYGPEIDIWSAGVILYILLCGVPPFWAESEQG-----VAQAI--------------- 265
++Y +D+WS G + ++ PF+ + +A+ +
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 266 ----LRGLID-FKRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
L L+ R PW VS A + ++L D + RLTA + + HP+
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
Query: 312 QNAKKAPN 319
Q + A N
Sbjct: 319 QQVRAAEN 326
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 38/195 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
+++ + CH G++HRD+KP N + + E L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 136 LLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 193
Query: 221 MAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQG-----VAQAI-------- 265
PE+L ++Y +D+WS G + ++ PF+ + +A+ +
Sbjct: 194 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 253
Query: 266 -----------LRGLID-FKRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
L L+ R PW VS A + ++L D + RLTA +
Sbjct: 254 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 313
Query: 305 VLEHPWLQNAKKAPN 319
+ HP+ Q + A N
Sbjct: 314 AMTHPYFQQVRAAEN 328
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 136/308 (44%), Gaps = 49/308 (15%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
+D Y V R++GRG++ + I+ + E C + ++ ++RE+ I+++L
Sbjct: 30 QDDYEVVRKVGRGKYSEVFEGINVNNNE--KCIIKILKPVKKKK----IKREIKILQNLM 83
Query: 110 KNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
+IV L + D ++ L+ E D V T+ +++ +
Sbjct: 84 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDY 140
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK 227
CH G++HRD+KP N + + E L+ ID+GL+ F+ PG+ ++ V S Y+ PE+L
Sbjct: 141 CHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 228 --RNYGPEIDIWSAGVILYILLCGVPPFWAESEQG-----VAQAI--------------- 265
++Y +D+WS G + ++ PF+ + +A+ +
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 266 ----LRGLID-FKRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
L L+ R PW VS A + ++L D + RLTA + + HP+
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
Query: 312 QNAKKAPN 319
Q + A N
Sbjct: 319 QQVRAAEN 326
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 38/195 (19%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
+++ + CH G++HRD+KP N + + E L+ ID+GL+ F+ PG+ ++ V S Y+
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 192
Query: 221 MAPEVLK--RNYGPEIDIWSAGVILYILLCGVPPFWAESEQG-----VAQAI-------- 265
PE+L ++Y +D+WS G + ++ PF+ + +A+ +
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 252
Query: 266 -----------LRGLID-FKRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQ 304
L L+ R PW VS A + ++L D + RLTA +
Sbjct: 253 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 312
Query: 305 VLEHPWLQNAKKAPN 319
+ HP+ Q + A N
Sbjct: 313 AMTHPYFQQVRAAEN 327
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 7/172 (4%)
Query: 326 VRSRLKQFSMMNRFKRKALRVIAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRN 385
V K + ++ +F++ A+ +IA+ + +VE +K F +D D G ++ ++LK GL
Sbjct: 21 VLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK 80
Query: 386 FGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGY 445
G +L + +L++ +D++G G +DY EF+A L R+ + + ++ AF FD D +G
Sbjct: 81 DGLKLPYN-FDLLLDQIDSDGSGKIDYTEFIAAALD-RKQLSKKLIYCAFRVFDVDNDGE 138
Query: 446 IEPNELRDALM---EDGADDCTDV--ANDIFQEVDTDKDGLISYDEFVAMMK 492
I EL L + G DV + ++VD + DG I + EF MMK
Sbjct: 139 ITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 136/308 (44%), Gaps = 49/308 (15%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
+D Y V R++GRG++ + I+ + E C + ++ ++RE+ I+++L
Sbjct: 30 QDDYEVVRKVGRGKYSEVFEGINVNNNE--KCIIKILKPVKKKK----IKREIKILQNLC 83
Query: 110 KNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
+IV L + D ++ L+ E D V T+ +++ +
Sbjct: 84 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDY 140
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK 227
CH G++HRD+KP N + + E L+ ID+GL+ F+ PG+ ++ V S Y+ PE+L
Sbjct: 141 CHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 228 --RNYGPEIDIWSAGVILYILLCGVPPFWAESEQG-----VAQAI--------------- 265
++Y +D+WS G + ++ PF+ + +A+ +
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 266 ----LRGLID-FKRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
L L+ R PW VS A + ++L D + RLTA + + HP+
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
Query: 312 QNAKKAPN 319
Q + A N
Sbjct: 319 QQVRAAEN 326
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 130/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK + FGL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILGFGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-VVNH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + +V +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K ++ LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVILYILLCG 249
L Y +DIWS GVI+ ++ G
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 125/267 (46%), Gaps = 27/267 (10%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
ELG G GV + + + ++A K I +++ A+ + + RE+ ++ H + IV
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 72
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE-VVQLCHKHGVIHR 176
A D + + ME +GG L + G E+ V+ +++ + L KH ++HR
Sbjct: 73 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 132
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK-RNYGPEID 235
D+KP N L ++ E +K DFG+S E +E VG+ YM+PE L+ +Y + D
Sbjct: 133 DVKPSNILVNSRGE---IKLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQGTHYSVQSD 188
Query: 236 IWSAGVILYILLCG---VPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSL----- 287
IWS G+ L + G PP AI L +P P + + SL
Sbjct: 189 IWSMGLSLVEMAVGRYPRPPM----------AIFELLDYIVNEPPPKLPSAVFSLEFQDF 238
Query: 288 VRQMLEPDPKLRLTAKQVLEHPWLQNA 314
V + L +P R KQ++ H +++ +
Sbjct: 239 VNKCLIKNPAERADLKQLMVHAFIKRS 265
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 133/315 (42%), Gaps = 56/315 (17%)
Query: 52 RYLVDRE----LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
RYL D E LGRG FGV + ++ A K I R + + V REV +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI--RLPNRELAREKVMREVKALAK 59
Query: 108 LPKNSSIVSLKEACEDDNA------------VHLVMELCEGGELFDRIVARGHYTERAAA 155
L ++ IV A + N +++ M+LC L D + R ER +
Sbjct: 60 L-EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS 118
Query: 156 A---VTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE--- 209
+ I E V+ H G++HRDLKP N F + +K DFGL E
Sbjct: 119 VCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQDEEEQ 175
Query: 210 ----------RFSEIVGSPYYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESE 258
R + VG+ YM+PE + N Y ++DI+S G+IL+ LL PF + E
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME 232
Query: 259 QGVAQAILRGLIDFKRDPWPNVSESAKS----LVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
+ +R L D + +P + +V+ ML P P R A ++E+ ++
Sbjct: 233 R------VRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286
Query: 315 KKAPNVPLGDVVRSR 329
+ P V+R R
Sbjct: 287 ----DFPGKTVLRQR 297
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 8/128 (6%)
Query: 371 DGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMAND-- 428
DG +ST EL +R G E+Q +I+ VD +G GT+D+ EFL +++ R M +D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV--RSMKDDSK 90
Query: 429 ----EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISY 484
E L F +DK+ +GYI+ +EL+ L G D ++ ++ D + DG I Y
Sbjct: 91 GKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 485 DEFVAMMK 492
DEF+ MK
Sbjct: 151 DEFLEFMK 158
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E++ ++F+ D + DG + DELK L+ G + E +++ L++ D N G +DY EFL
Sbjct: 95 EELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 417 AVL 419
+
Sbjct: 155 EFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 8/128 (6%)
Query: 371 DGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMAND-- 428
DG +ST EL +R G E+Q +I+ VD +G GT+D+ EFL +++ R M +D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV--RSMKDDSK 90
Query: 429 ----EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISY 484
E L F FDK+ +GYI+ +EL+ L G D ++ ++ D + DG I Y
Sbjct: 91 GKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 485 DEFVAMMK 492
DE++ MK
Sbjct: 151 DEWLEFMK 158
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 19/240 (7%)
Query: 48 NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKH 107
++ DRY + LG G +L D +A K + R RRE
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 108 LPKNSSIVSLKEACEDDNAV----HLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE 163
L + +IV++ E + ++VME +G L D + G T + A V +
Sbjct: 69 L-NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 164 VVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-IFFKPGERFSE---IVGSPY 219
+ H++G+IHRD+KP N + + +K +DFG++ G ++ ++G+
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNA---VKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 220 YMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWP 278
Y++PE + + D++S G +LY +L G PPF +S VA +R DP P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIP 238
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 326 VRSRLKQFSMMNRFKRKALRVIAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRN 385
V K +++M RF++ A+ +IA+ + +V+ +K F +D + G ++ +L+ GL
Sbjct: 24 VLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLER 83
Query: 386 FGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGY 445
G L + +L++ +D++G G +DY EFLA + RR + + ++ AF FD D +G
Sbjct: 84 SGLMLPPN-FDLLLDQIDSDGSGNIDYTEFLAAAID-RRQLSKKLIYCAFRVFDVDNDGE 141
Query: 446 IEPNELRDALMEDGADDCTDVANDIFQ------EVDTDKDGLISYDEFVAMMK 492
I EL L +G D+ Q EVD + DG I + EF MMK
Sbjct: 142 ITTAELAHVLF-NGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMK 193
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 307 EHPWLQNAKKAPNVP-LGDVVRSRLKQFSMMNRFKRKALRVIAEFL-SVEEVEDIKEMFK 364
E+ + Q + +P L + + + +++F + + AL +A L S EE +++ ++F+
Sbjct: 12 ENLYFQGKESGIELPSLANAIEN-MRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFR 70
Query: 365 KIDSDNDGVVSTDELKAGLRNF-GSQLA-------ESEVQMLIEAVDTNGKGTLDYGEFL 416
ID + DG + EL G G ++A ESEV ++ A D + G +DY EF+
Sbjct: 71 HIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFV 130
Query: 417 AVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDT 476
V + + + + + L AF FD+DGNG I +EL D + T ++ +D+
Sbjct: 131 TVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKT--WKEMISGIDS 188
Query: 477 DKDGLISYDEFVAMMK 492
+ DG + ++EF M++
Sbjct: 189 NNDGDVDFEEFCKMIQ 204
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 128/298 (42%), Gaps = 44/298 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D + +A K +S R ++ + RE+ ++KH+
Sbjct: 49 VPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS-RPFQSIIHAKRTYRELRLLKHM 107
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G +L + IV T+ + I+
Sbjct: 108 -KHENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 164
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +DFGL+ + + V + +Y A
Sbjct: 165 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 219
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F Q I+R
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRM 279
Query: 268 -------GLIDFKRDPWPNVSES-------AKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
+ + P N ++ A L+ +ML D R+TA + L HP+
Sbjct: 280 PSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYF 337
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 128/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +D GL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDAGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-VVNH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + +V +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K ++ LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVILYILLCG 249
L Y +DIWS GVI+ ++ G
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 129/296 (43%), Gaps = 47/296 (15%)
Query: 52 RYLVDRE----LGRGEFGVTYLCIDRDTRELLACKSISKRKLR-TAVDIDDVRREVAIMK 106
RY D E LG+G FG R L + + +K+R T + + EV ++
Sbjct: 3 RYASDFEEIAVLGQGAFGQVV-----KARNALDSRYYAIKKIRHTEEKLSTILSEVMLLA 57
Query: 107 HLPKNSSI------------VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTER-A 153
L + V A + + + + ME CE L+D I + +R
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 154 AAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK------- 206
+ R I+E + H G+IHRDLKP N +F ++ N +K DFGL+
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRDLKPMN-IFIDESRN--VKIGDFGLAKNVHRSLDILK 174
Query: 207 ------PG--ERFSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAE 256
PG + + +G+ Y+A EVL +Y +ID++S G+I + ++ PF
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231
Query: 257 SEQGVAQAILRGL-IDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
E+ LR + I+F D N + K ++R +++ DP R A+ +L WL
Sbjct: 232 MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 128/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +D GL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDGGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 31/244 (12%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLR----TAVDIDDVRREVAIMK 106
+ Y+ +LG G + Y + T L+A K I TA+ REV+++K
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI------REVSLLK 55
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEG--GELFDRI--VARGHYTERAAAAVTRTIV 162
L K+++IV+L + + ++ LV E + + D + H + + R +
Sbjct: 56 DL-KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLA 114
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGL----SIFFKPGERFSEIVGSP 218
CH+ V+HRDLKP+N L + E LK DFGL SI P + + V +
Sbjct: 115 ----YCHRQKVLHRDLKPQNLLINERGE---LKLADFGLARAKSI---PTKTYDNEVVTL 164
Query: 219 YYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDP 276
+Y P++L +Y +ID+W G I Y + G P F + + I R L +
Sbjct: 165 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEET 224
Query: 277 WPNV 280
WP +
Sbjct: 225 WPGI 228
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 128/311 (41%), Gaps = 44/311 (14%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY +G G +G D T +A K +S R ++ + RE+ ++KH+
Sbjct: 20 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHM 78
Query: 109 PKNSSIVSLKE------ACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIV 162
K+ +++ L + + E+ N V+LV L G + IV T+ + I+
Sbjct: 79 -KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMA 222
++ H +IHRDLKP N E+ LK +D GL+ + + V + +Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDRGLA--RHTDDEMTGYVATRWYRA 190
Query: 223 PEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILR------------- 267
PE++ +Y +DIWS G I+ LL G F + ILR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 268 ----------GLIDFKRDPWPNV----SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
L + + NV + A L+ +ML D R+TA Q L H +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 314 AKKAPNVPLGD 324
+ P+ D
Sbjct: 311 YHDPDDEPVAD 321
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 85/147 (57%), Gaps = 4/147 (2%)
Query: 347 IAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNG 406
+++ L+ E++ + KE F D DN G +S EL +R+ G +E+EV L+ +D +G
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 407 KGTLDYGEFLAVLL-HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
+++ EFLA++ L+ +++ L +AF FDK+G+G I EL+ L G + TD
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG-EKLTD 119
Query: 466 V-ANDIFQEVDTDKDGLISYDEFVAMM 491
+++ +EV +D G I+ +F A++
Sbjct: 120 AEVDEMLREV-SDGSGEINIKQFAALL 145
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 144/359 (40%), Gaps = 100/359 (27%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ D Y + +GRG +G YL D++ + +A K ++ R +D + RE+ I+ L
Sbjct: 26 VPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVN-RMFEDLIDCKRILREITILNRL 84
Query: 109 PKNSSIVSLKEACEDDNA-----VHLVMELCEG--GELFDRIVARGHYTERAAAAVTRTI 161
K+ I+ L + ++ +++V+E+ + +LF + TE+ + +
Sbjct: 85 -KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEQHVKTILYNL 140
Query: 162 VEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS------------------- 202
+ + H+ G+IHRDLKP N L ++ +K DFGL+
Sbjct: 141 LLGEKFIHESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDKDIHIVNDLEEKE 197
Query: 203 IFFKPG-------ERFSEIVGSPYYMAPE--VLKRNYGPEIDIWSAGVILYILL------ 247
+PG ++ + V + +Y APE +L+ NY IDIWS G I LL
Sbjct: 198 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSH 257
Query: 248 -------------------------------------------CGVPP---FWAESEQGV 261
G PP ++Q V
Sbjct: 258 INNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEV 317
Query: 262 AQAI----LRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
+ I R ID + + ++S+ L+ ML + + R+T + L HP+L++ +K
Sbjct: 318 IKYIKLFPTRDGIDLSKK-YSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRK 375
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 16/230 (6%)
Query: 100 REVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTR 159
REV +++ ++ +++ +D ++ +ELC V + + +T
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAAT--LQEYVEQKDFAHLGLEPITL 123
Query: 160 TIVEVVQLCHKHG--VIHRDLKPENFLFANKKENSPLKAI--DFGLSIFFKPG----ERF 211
L H H ++HRDLKP N L + + +KA+ DFGL G R
Sbjct: 124 LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 212 SEIVGSPYYMAPEVL----KRNYGPEIDIWSAGVILYILLC-GVPPFWAESEQGVAQAIL 266
S + G+ ++APE+L K N +DI+SAG + Y ++ G PF +S Q A +L
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF-GKSLQRQANILL 242
Query: 267 RGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
P + A+ L+ +M+ DP+ R +AK VL+HP+ + +K
Sbjct: 243 GACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEK 292
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 149/362 (41%), Gaps = 68/362 (18%)
Query: 43 GVPKE---------NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAV 93
GVP E ++ RY + +G G +G+ D + +A K IS + +T
Sbjct: 26 GVPGEVEMVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYC 85
Query: 94 DIDDVRREVAIMKHLPKNSSIVSLKE-----ACEDDNAVHLVMELCEGGELFDRIVARGH 148
RE+ I+ ++ +++ +++ E V++V +L E +L+ +++
Sbjct: 86 Q--RTLREIQILLRF-RHENVIGIRDILRASTLEAMRDVYIVQDLMET-DLY-KLLKSQQ 140
Query: 149 YTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPG 208
+ I+ ++ H V+HRDLKP N L + LK DFGL+ P
Sbjct: 141 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCD---LKICDFGLARIADPE 197
Query: 209 ER----FSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPF--------- 253
+E V + +Y APE++ + Y IDIWS G IL +L P F
Sbjct: 198 HDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
Query: 254 -------WAESEQGV-------AQAILRGLIDFKRDPW----PNVSESAKSLVRQMLEPD 295
+ S++ + A+ L+ L + W P A L+ +ML +
Sbjct: 258 NHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFN 317
Query: 296 PKLRLTAKQVLEHPWLQNAKKAPNVP-----------LGDVVRSRLKQ--FSMMNRFKRK 342
P R+T ++ L HP+L+ + P L D+ + RLK+ F RF+
Sbjct: 318 PNKRITVEEALAHPYLEQYYDPTDEPVAEEPFTFAMELDDLPKERLKELIFQETARFQPG 377
Query: 343 AL 344
L
Sbjct: 378 VL 379
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 16/224 (7%)
Query: 95 IDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAA 154
I++VR+E + L K+ +I++L+ C + + LVME GG L +R+++
Sbjct: 50 IENVRQEAKLFAML-KHPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDIL 107
Query: 155 AAVTRTIVEVVQLCHKHGV---IHRDLKPENFLFANKKENSP-----LKAIDFGLSIFFK 206
I + H + IHRDLK N L K EN LK DFGL+ +
Sbjct: 108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH 167
Query: 207 PGERFSEIVGSPYYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAI 265
+ S G+ +MAPEV++ + + D+WS GV+L+ LL G PF VA +
Sbjct: 168 RTTKMSA-AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV 226
Query: 266 LRGLIDFKRDPWPNVS-ESAKSLVRQMLEPDPKLRLTAKQVLEH 308
+ P P+ E L+ PDP R + +L+
Sbjct: 227 AMNKLAL---PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 132/301 (43%), Gaps = 50/301 (16%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL- 117
+G G +G +D T +A K + R ++ + RE+ ++KH+ ++ +++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLY-RPFQSELFAKRAYRELRLLKHM-RHENVIGLL 90
Query: 118 -----KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHG 172
E +D +LVM G +++ E + +++ ++ H G
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG 148
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVG---SPYYMAPEVLKR- 228
+IHRDLKP N E+ LK +DFGL+ + SE+ G + +Y APEV+
Sbjct: 149 IIHRDLKPGNLAV---NEDCELKILDFGLA-----RQADSEMXGXVVTRWYRAPEVILNW 200
Query: 229 -NYGPEIDIWSAGVILYILLCG---------------------VPP--FWAESEQGVAQA 264
Y +DIWS G I+ ++ G PP F + A+
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260
Query: 265 ILRGLIDFKRDPWP----NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNV 320
++GL + ++ + N S A +L+ +ML D + R+TA + L HP+ ++ +
Sbjct: 261 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDE 320
Query: 321 P 321
P
Sbjct: 321 P 321
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 371 DGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMAND-- 428
DG +ST EL +R G E+Q +I+ VD +G GT+D+ EFL +++ R M +D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV--RSMKDDSK 90
Query: 429 ----EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISY 484
E L F DK+ +GYI+ +EL+ L G D ++ ++ D + DG I Y
Sbjct: 91 GKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 485 DEFVAMMK 492
DEF+ MK
Sbjct: 151 DEFLEFMK 158
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E++ ++F+ D + DG + DELK L+ G + E +++ L++ D N G +DY EFL
Sbjct: 95 EELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 417 AVL 419
+
Sbjct: 155 EFM 157
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 371 DGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMAND-- 428
DG +ST EL +R G E+Q +I+ VD +G GT+D+ EFL +++ R M +D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV--RSMKDDSK 90
Query: 429 ----EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISY 484
E L F FDK+ +GYI+ +EL+ L G D ++ ++ D + DG I Y
Sbjct: 91 GKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 485 DEFVAMMK 492
DE + MK
Sbjct: 151 DEXLEFMK 158
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXV-NH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLCGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 307 EHPWL 311
+HP++
Sbjct: 317 QHPYI 321
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 135/306 (44%), Gaps = 49/306 (16%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLP 109
+D Y V R++GRG++ + I+ + E C + ++ ++RE+ I+++L
Sbjct: 30 QDDYEVVRKVGRGKYSEVFEGINVNNNE--KCIIKILKPVKKKK----IKREIKILQNLC 83
Query: 110 KNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQL 167
+IV L + D ++ L+ E D V T+ +++ +
Sbjct: 84 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDY 140
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLK 227
CH G++HRD+KP N + + E L+ ID+GL+ F+ PG+ ++ V S Y+ PE+L
Sbjct: 141 CHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 198
Query: 228 --RNYGPEIDIWSAGVILYILLCGVPPFWAESEQG-----VAQAI--------------- 265
++Y +D+WS G + ++ PF+ + +A+ +
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 266 ----LRGLID-FKRDPWPN---------VSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
L L+ R PW VS A + ++L D + RLTA + + HP+
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
Query: 312 QNAKKA 317
Q + A
Sbjct: 319 QQVRAA 324
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Query: 354 EEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYG 413
E+ ++I+E F D+D G + ELK +R G + + E++ +I +D G G +++G
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62
Query: 414 EFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQ 472
+FL V+ + E + KAF FD D G I L+ E G + + ++
Sbjct: 63 DFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMID 122
Query: 473 EVDTDKDGLISYDEFVAMMK 492
E D D DG +S EF+ +MK
Sbjct: 123 EADRDGDGEVSEQEFLRIMK 142
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E+ ++I+E F D+D G + ELK +R G + + E++ +I +D +G GT+
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 411 DYGEFLAVLL-HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
D+ EFL ++ + + E + KAF FD D G I L+ E G + + +
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 470 IFQEVDTDKDGLISYDEFVAMMK 492
+ E D D DG ++ +EF +MK
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIMK 144
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXV-NH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 307 EHPWL 311
+HP++
Sbjct: 317 QHPYI 321
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 128/301 (42%), Gaps = 45/301 (14%)
Query: 50 EDRYLVDRELGRGEFGVTYLCIDRDT-RELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
E R V R L G F Y D + RE + +S + + I +EV MK L
Sbjct: 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAII----QEVCFMKKL 82
Query: 109 PKNSSIVSL-------KEACEDDNAVHLVM-ELCEGG--ELFDRIVARGHYTERAAAAVT 158
+ +IV KE + A L++ ELC+G E ++ +RG + +
Sbjct: 83 SGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIF 142
Query: 159 RTIVEVVQLCHKHG--VIHRDLKPENFLFANKKENSPLKAIDFG--LSIFFKPGERFS-- 212
VQ H+ +IHRDLK EN L +N+ +K DFG +I P +S
Sbjct: 143 YQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ---GTIKLCDFGSATTISHYPDYSWSAQ 199
Query: 213 -------EIV--GSPYYMAPEV--LKRNY--GPEIDIWSAGVILYILLCGVPPFWAESEQ 259
EI +P Y PE+ L N+ G + DIW+ G ILY+L PF E
Sbjct: 200 RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----ED 255
Query: 260 GVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPN 319
G I+ G + P SL+R ML+ +P+ RL+ +V+ LQ A N
Sbjct: 256 GAKLRIVNG--KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ--LQEIAAARN 311
Query: 320 V 320
V
Sbjct: 312 V 312
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 120
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 178
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 179 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 354
Query: 307 EHPWL 311
+HP++
Sbjct: 355 QHPYI 359
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXV-NH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 307 EHPWL 311
+HP++
Sbjct: 317 QHPYI 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 307 EHPWL 311
+HP++
Sbjct: 317 QHPYI 321
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 120
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 178
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 179 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 354
Query: 307 EHPWL 311
+HP++
Sbjct: 355 QHPYI 359
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 123/330 (37%), Gaps = 70/330 (21%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK- 110
RY + LG G FG CID I K R + R E+ +++HL
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYC---EAARSEIQVLEHLNTT 71
Query: 111 --NSSI--VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERA--AAAVTRTIVEV 164
NS+ V + E E + +V EL G +D I G R + I +
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 165 VQLCHKHGVIHRDLKPENFLFANKKE----------------NSPLKAIDFGLSIFFKPG 208
V H + + H DLKPEN LF N +K +DFG + +
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DD 188
Query: 209 ERFSEIVGSPYYMAPEV-LKRNYGPEIDIWSAGVIL---YILLCGVPPFWAESEQGVAQA 264
E S +V + +Y APEV L + D+WS G IL Y+ P ++ + +
Sbjct: 189 EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 265 IL-------------RGLIDFKRDPWPNVSESAK------------------------SL 287
IL R R W S + + L
Sbjct: 249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL 308
Query: 288 VRQMLEPDPKLRLTAKQVLEHPWLQNAKKA 317
+++MLE DP R+T ++ L+HP+ KK+
Sbjct: 309 IQKMLEYDPAKRITLREALKHPFFDLLKKS 338
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-VVNH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + +V +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K ++ LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVILYILLCG 249
L Y +DIWS G I+ ++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 75
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXGIK 133
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 134 HL-HSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309
Query: 307 EHPWL 311
+HP++
Sbjct: 310 QHPYI 314
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 131/306 (42%), Gaps = 55/306 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ ++K + +
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQTHAKRAYRELVLLKCV-NH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLCGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVILYILLCGVPPF--------WAES-EQ---------GVAQAIL 266
L Y +DIWS G I+ L+ G F W + EQ Q +
Sbjct: 197 ILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 256
Query: 267 RGLIDFKRDPWPNV------------SES---------AKSLVRQMLEPDPKLRLTAKQV 305
R ++ R +P + SES A+ L+ +ML DP R++ +
Sbjct: 257 RNYVE-NRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEA 315
Query: 306 LEHPWL 311
L HP++
Sbjct: 316 LRHPYI 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 83
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 141
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 142 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 257
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 258 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 317
Query: 307 EHPWL 311
+HP++
Sbjct: 318 QHPYI 322
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 307 EHPWL 311
+HP++
Sbjct: 317 QHPYI 321
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 307 EHPWL 311
+HP++
Sbjct: 317 QHPYI 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 83
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 141
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 142 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 257
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 258 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 317
Query: 307 EHPWL 311
+HP++
Sbjct: 318 QHPYI 322
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 131/306 (42%), Gaps = 55/306 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ ++K + +
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQTHAKRAYRELVLLKCV-NH 80
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLCGIK 138
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 139 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEV 194
Query: 226 -LKRNYGPEIDIWSAGVILYILLCGVPPF--------WAES-EQ---------GVAQAIL 266
L Y +DIWS G I+ L+ G F W + EQ Q +
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 254
Query: 267 RGLIDFKRDPWPNV------------SES---------AKSLVRQMLEPDPKLRLTAKQV 305
R ++ R +P + SES A+ L+ +ML DP R++ +
Sbjct: 255 RNYVE-NRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEA 313
Query: 306 LEHPWL 311
L HP++
Sbjct: 314 LRHPYI 319
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 76
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 134
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 135 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 250
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 251 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 310
Query: 307 EHPWL 311
+HP++
Sbjct: 311 QHPYI 315
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 24 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 81
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 139
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 140 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 195
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 196 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 255
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 256 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 315
Query: 307 EHPWL 311
+HP++
Sbjct: 316 QHPYI 320
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 76
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 134
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 135 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 250
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 251 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 310
Query: 307 EHPWL 311
+HP++
Sbjct: 311 QHPYI 315
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 53/305 (17%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 75
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+SL ++ E+ V+LVMEL + +++ ER + + + + +
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 133
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 134 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
Query: 226 -LKRNYGPEIDIWSAGVIL------YILLCG-----------------VPPFWAESEQGV 261
L Y +DIWS G I+ IL G P F + + V
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249
Query: 262 AQAI-----LRGLIDFKRDP---WPNVSE-------SAKSLVRQMLEPDPKLRLTAKQVL 306
+ GL K P +P SE A+ L+ +ML DP R++ L
Sbjct: 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309
Query: 307 EHPWL 311
+HP++
Sbjct: 310 QHPYI 314
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEF- 415
+ I+E F+ D DNDG VS +EL + LR+ G +E+ + KG L+ EF
Sbjct: 5 DQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNAKEFD 56
Query: 416 LAVLLHLRR------MANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVAND 469
LA + R + + AF DK+GNG I+ ELR L+ G + +
Sbjct: 57 LATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEE 116
Query: 470 IFQEVDTDKDGLISYDEFVAMMKTG 494
+ +EV DG I+Y+ FV M+ TG
Sbjct: 117 LMKEVSVSGDGAINYESFVDMLVTG 141
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 40/67 (59%)
Query: 354 EEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYG 413
E+ +++ + F+ +D + +G + EL+ L N G L SEV+ L++ V +G G ++Y
Sbjct: 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYE 132
Query: 414 EFLAVLL 420
F+ +L+
Sbjct: 133 SFVDMLV 139
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 122/330 (36%), Gaps = 70/330 (21%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK- 110
RY + LG G FG CID I K R + R E+ +++HL
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYC---EAARSEIQVLEHLNTT 71
Query: 111 --NSSI--VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTER--AAAAVTRTIVEV 164
NS+ V + E E + +V EL G +D I G R + I +
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 165 VQLCHKHGVIHRDLKPENFLFANKKE----------------NSPLKAIDFGLSIFFKPG 208
V H + + H DLKPEN LF N +K +DFG + +
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DD 188
Query: 209 ERFSEIVGSPYYMAPEV-LKRNYGPEIDIWSAGVIL---YILLCGVPPFWAESEQGVAQA 264
E S +V +Y APEV L + D+WS G IL Y+ P ++ + +
Sbjct: 189 EHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 265 IL-------------RGLIDFKRDPWPNVSESAK------------------------SL 287
IL R R W S + + L
Sbjct: 249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL 308
Query: 288 VRQMLEPDPKLRLTAKQVLEHPWLQNAKKA 317
+++MLE DP R+T ++ L+HP+ KK+
Sbjct: 309 IQKMLEYDPAKRITLREALKHPFFDLLKKS 338
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 124/286 (43%), Gaps = 42/286 (14%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G GEFG + C+ R + A K SK+ L +VD + REV L ++S +V
Sbjct: 14 KIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVAR----GHYTERAAAAVTRTIVEVVQLCHKHGV 173
A +D+ + + E C GG L D I ++ E + + ++ H +
Sbjct: 73 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 132
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFG-------LSIFFKPGE-----RFSEIV---GSP 218
+H D+KP N + + + P A + G + FK G+ R S G
Sbjct: 133 VHMDIKPSNIFIS--RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 190
Query: 219 YYMAPEVLKRNYG--PEIDIWSAGVILYILLCGVPPF------WAESEQGVAQAILRGLI 270
++A EVL+ NY P+ DI++ + + + G P W E QG I + L
Sbjct: 191 RFLANEVLQENYTHLPKADIFALALTV-VXAAGAEPLPRNGDQWHEIRQGRLPRIPQVL- 248
Query: 271 DFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
S+ L++ M+ PDP+ R +A +++H L +A +
Sbjct: 249 ----------SQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 284
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 124/286 (43%), Gaps = 42/286 (14%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G GEFG + C+ R + A K SK+ L +VD + REV L ++S +V
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVAR----GHYTERAAAAVTRTIVEVVQLCHKHGV 173
A +D+ + + E C GG L D I ++ E + + ++ H +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFG-------LSIFFKPGE-----RFSEIV---GSP 218
+H D+KP N + + + P A + G + FK G+ R S G
Sbjct: 135 VHMDIKPSNIFIS--RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 192
Query: 219 YYMAPEVLKRNYG--PEIDIWSAGVILYILLCGVPPF------WAESEQGVAQAILRGLI 270
++A EVL+ NY P+ DI++ + + + G P W E QG I + L
Sbjct: 193 RFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRIPQVL- 250
Query: 271 DFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
S+ L++ M+ PDP+ R +A +++H L +A +
Sbjct: 251 ----------SQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 286
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
+L+ LG+G + + T +L A K + VD+ RE ++K L +
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKL-NHK 67
Query: 113 SIVSLKEACEDDNAVH--LVMELCEGGELFDRIVARGH---YTERAAAAVTRTIVEVVQL 167
+IV L E+ H L+ME C G L+ + + E V R +V +
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 168 CHKHGVIHRDLKPENFL-FANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL 226
++G++HR++KP N + + S K DFG + + E+F + G+ Y+ P++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMY 187
Query: 227 KR---------NYGPEIDIWSAGVILYILLCGVPPF 253
+R YG +D+WS GV Y G PF
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 124/286 (43%), Gaps = 42/286 (14%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G GEFG + C+ R + A K SK+ L +VD + REV L ++S +V
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVAR----GHYTERAAAAVTRTIVEVVQLCHKHGV 173
A +D+ + + E C GG L D I ++ E + + ++ H +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFG-------LSIFFKPGE-----RFSEIV---GSP 218
+H D+KP N + + + P A + G + FK G+ R S G
Sbjct: 135 VHMDIKPSNIFIS--RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 192
Query: 219 YYMAPEVLKRNYG--PEIDIWSAGVILYILLCGVPPF------WAESEQGVAQAILRGLI 270
++A EVL+ NY P+ DI++ + + + G P W E QG I + L
Sbjct: 193 RFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRIPQVL- 250
Query: 271 DFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
S+ L++ M+ PDP+ R +A +++H L +A +
Sbjct: 251 ----------SQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 286
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 44/287 (15%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
++G GEFG + C+ R + A K SK+ L +VD + REV L ++S +V
Sbjct: 18 KIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVAR----GHYTERAAAAVTRTIVEVVQLCHKHGV 173
A +D+ + + E C GG L D I ++ E + + ++ H +
Sbjct: 77 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 136
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFG-------LSIFFKPGE-----RFSEIV---GSP 218
+H D+KP N + + + P A + G + FK G+ R S G
Sbjct: 137 VHMDIKPSNIFIS--RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 194
Query: 219 YYMAPEVLKRNYG--PEIDIWSAGVILYILLCGVPPF------WAESEQGVAQAILRGLI 270
++A EVL+ NY P+ DI++ + + + G P W E QG I
Sbjct: 195 RFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRI----- 248
Query: 271 DFKRDPWPNV-SESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK 316
P V S+ L++ M+ PDP+ R +A +++H L +A +
Sbjct: 249 -------PQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 288
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D DN+G +S+ EL +R+ G +E+EV L+ +D +G +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 411 DYGEFLAVLL-HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDG 459
++ EFLA++ L+ +++ L +AF FDK+G+G I EL+ L G
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 113
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AF+ FDKD NG I +EL + G ND+ E+D D + I + EF+A+M
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 26/40 (65%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQ 396
+++ E FK D + DG++S ELK L + G +L ++E++
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-VVNH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K ++ LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVILYILLCG 249
L Y +DIWS G I+ ++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
+L+ LG+G + + T +L A K + VD+ RE ++K L +
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKL-NHK 67
Query: 113 SIVSLKEACEDDNAVH--LVMELCEGGELFDRIVARGH---YTERAAAAVTRTIVEVVQL 167
+IV L E+ H L+ME C G L+ + + E V R +V +
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 168 CHKHGVIHRDLKPENFL-FANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL 226
++G++HR++KP N + + S K DFG + + E+F + G+ Y+ P++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMY 187
Query: 227 KR---------NYGPEIDIWSAGVILYILLCGVPPF 253
+R YG +D+WS GV Y G PF
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K ++ LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVIL 243
L Y +DIWS G I+
Sbjct: 197 ILGMGYKENVDIWSVGCIM 215
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRD-TRELLACKSISKRKLRTAVDIDDVRREVAIM 105
D+ + + LG G FG + ID+D +E + + T D+ D+ E+ +M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR----------------GHY 149
K + K+ +I++L AC D +++++E G L + + AR
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 150 TERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
T + + T + ++ IHRDL N L EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNID 211
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+++ I G P+ + + +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 272 LKEG---HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 47/296 (15%)
Query: 52 RYLVDRE----LGRGEFGVTYLCIDRDTRELLACKSISKRKLR-TAVDIDDVRREVAIMK 106
RY D E LG+G FG R L + + +K+R T + + EV ++
Sbjct: 3 RYASDFEEIAVLGQGAFGQVV-----KARNALDSRYYAIKKIRHTEEKLSTILSEVXLLA 57
Query: 107 HLP------------KNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTER-A 153
L + + V A + + + + E CE L+D I + +R
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE 117
Query: 154 AAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK------- 206
+ R I+E + H G+IHR+LKP N +F ++ N +K DFGL+
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRNLKPXN-IFIDESRN--VKIGDFGLAKNVHRSLDILK 174
Query: 207 ------PG--ERFSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAE 256
PG + + +G+ Y+A EVL +Y +ID +S G+I + + PF
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF---EXIYPFSTG 231
Query: 257 SEQGVAQAILRGL-IDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
E+ LR + I+F D N + K ++R +++ DP R A+ +L WL
Sbjct: 232 XERVNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 110/253 (43%), Gaps = 19/253 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESA 284
L Y +DIWS G I+ ++ G F ++ L P P +
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL----GTPSPEFMKKL 252
Query: 285 KSLVRQMLEPDPK 297
+ VR +E PK
Sbjct: 253 QPTVRTYVENRPK 265
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
ELG G GV + + + ++A K I +++ A+ + + RE+ ++ H + IV
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 131
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE-VVQLCHKHGVIHR 176
A D + + ME +GG L + G E+ V+ +++ + L KH ++HR
Sbjct: 132 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 191
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF----SEIVGSPYYMAPEVLK-RNYG 231
D+KP N L ++ E +K DFG+S G+ + VG+ YM+PE L+ +Y
Sbjct: 192 DVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYS 243
Query: 232 PEIDIWSAGVILYILLCG---VPP 252
+ DIWS G+ L + G +PP
Sbjct: 244 VQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
ELG G GV + + + ++A K I +++ A+ + + RE+ ++ H + IV
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 96
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE-VVQLCHKHGVIHR 176
A D + + ME +GG L + G E+ V+ +++ + L KH ++HR
Sbjct: 97 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 156
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF----SEIVGSPYYMAPEVLK-RNYG 231
D+KP N L ++ E +K DFG+S G+ + VG+ YM+PE L+ +Y
Sbjct: 157 DVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYS 208
Query: 232 PEIDIWSAGVILYILLCG---VPP 252
+ DIWS G+ L + G +PP
Sbjct: 209 VQSDIWSMGLSLVEMAVGRYPIPP 232
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 76
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + + +
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 134
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 135 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 226 -LKRNYGPEIDIWSAGVILYILLC 248
L Y +D+WS G I+ ++C
Sbjct: 191 ILGMGYKENVDLWSVGCIMGEMVC 214
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 30 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 87
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + + +
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 145
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 146 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 201
Query: 226 -LKRNYGPEIDIWSAGVILYILLC 248
L Y +D+WS G I+ ++C
Sbjct: 202 ILGMGYKENVDLWSVGCIMGEMVC 225
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRD-TRELLACKSISKRKLRTAVDIDDVRREVAIM 105
D+ + + LG G FG + ID+D +E + + T D+ D+ E+ +M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR----------------GHY 149
K + K+ +I++L AC D +++++E G L + + AR
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 150 TERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
T + + T + ++ IHRDL N L EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNID 211
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+++ I G P+ + + +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 272 LKEG---HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
ELG G GV + + + ++A K I +++ A+ + + RE+ ++ H + IV
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE-VVQLCHKHGVIHR 176
A D + + ME +GG L + G E+ V+ +++ + L KH ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF----SEIVGSPYYMAPEVLK-RNYG 231
D+KP N L ++ E +K DFG+S G+ + VG+ YM+PE L+ +Y
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 232 PEIDIWSAGVILYILLCG---VPP 252
+ DIWS G+ L + G +PP
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 119/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRD-TRELLACKSISKRKLRTAVDIDDVRREVAIM 105
D+ + + LG G FG + ID+D +E + + T D+ D+ E+ +M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR----------------GHY 149
K + K+ +I++L AC D +++++E G L + + AR
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 150 TERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
T + + T + ++ IHRDL N L EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNID 211
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ +MAPE L R Y + D+WS GV+++ I G P+ + + +
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 272 LKEG---HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 110/253 (43%), Gaps = 19/253 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 83
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + + +
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 141
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 142 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 226 -LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESA 284
L Y +DIWS G I+ ++ G F ++ L P P +
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL----GTPCPEFMKKL 253
Query: 285 KSLVRQMLEPDPK 297
+ VR +E PK
Sbjct: 254 QPTVRTYVENRPK 266
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
ELG G GV + + + ++A K I +++ A+ + + RE+ ++ H + IV
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE-VVQLCHKHGVIHR 176
A D + + ME +GG L + G E+ V+ +++ + L KH ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF----SEIVGSPYYMAPEVLK-RNYG 231
D+KP N L ++ E +K DFG+S G+ + VG+ YM+PE L+ +Y
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 232 PEIDIWSAGVILYILLCG---VPP 252
+ DIWS G+ L + G +PP
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
ELG G GV + + + ++A K I +++ A+ + + RE+ ++ H + IV
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE-VVQLCHKHGVIHR 176
A D + + ME +GG L + G E+ V+ +++ + L KH ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF----SEIVGSPYYMAPEVLK-RNYG 231
D+KP N L ++ E +K DFG+S G+ + VG+ YM+PE L+ +Y
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 232 PEIDIWSAGVILYILLCG---VPP 252
+ DIWS G+ L + G +PP
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 68.6 bits (166), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 354 EEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYG 413
++V + KE F+ DS+ G ++ + L+ L+ FG ++ + + D G G + +
Sbjct: 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62
Query: 414 EFLAVL-LHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQ 472
EFL+++ +++ +++ L +AF FD +G GYI L+DAL+ G +
Sbjct: 63 EFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLG 122
Query: 473 EVDTDKDGLISYDEFVAMMKT 493
+T+K G I YD F+ M T
Sbjct: 123 ITETEK-GQIRYDNFINTMFT 142
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 110/253 (43%), Gaps = 19/253 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESA 284
L Y +DIWS G I+ ++ G F ++ L P P +
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL----GTPCPEFMKKL 252
Query: 285 KSLVRQMLEPDPK 297
+ VR +E PK
Sbjct: 253 QPTVRTYVENRPK 265
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
ELG G GV + + + ++A K I +++ A+ + + RE+ ++ H + IV
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE-VVQLCHKHGVIHR 176
A D + + ME +GG L + G E+ V+ +++ + L KH ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF----SEIVGSPYYMAPEVLK-RNYG 231
D+KP N L ++ E +K DFG+S G+ + VG+ YM+PE L+ +Y
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 232 PEIDIWSAGVILYILLCG---VPP 252
+ DIWS G+ L + G +PP
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 14/151 (9%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L EE+E+++E F++ D D DG ++ +L +R G E E+ L + ++ N G +
Sbjct: 19 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 78
Query: 411 DYGEFL-----AVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALM-----EDGA 460
D+ +F+ +L M + L AF FD +G+G I +ELR+A+ + G
Sbjct: 79 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 138
Query: 461 DDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
D ++ D VD + DG + ++EFV MM
Sbjct: 139 RDIEEIIRD----VDLNGDGRVDFEEFVRMM 165
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 119/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRD-TRELLACKSISKRKLRTAVDIDDVRREVAIM 105
D+ + + LG G FG + ID+D +E + + T D+ D+ E+ +M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR----------------GHY 149
K + K+ +I+ L AC D +++++E G L + + AR
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 150 TERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
T + + T + ++ IHRDL N L EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNID 211
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+++ I G P+ + + +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 272 LKEG---HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 110/253 (43%), Gaps = 19/253 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESA 284
L Y +DIWS G I+ ++ G F ++ L P P +
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL----GTPSPEFMKKL 252
Query: 285 KSLVRQMLEPDPK 297
+ VR +E PK
Sbjct: 253 QPTVRTYVENRPK 265
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 58 ELGRGEFGVTYLCIDRDT----RELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSS 113
++G G FGV Y +T ++L A I+ +L+ D +E+ +M ++ +
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD-----QEIKVMAKC-QHEN 91
Query: 114 IVSLKEACEDDNAVHLVMELCEGGELFDRIV---ARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L D + + LV G L DR+ + + + + H+
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF------SEIVGSPYYMAPE 224
+ IHRD+K N L E K DFGL+ + E+F S IVG+ YMAPE
Sbjct: 152 NHHIHRDIKSANILL---DEAFTAKISDFGLA---RASEKFAQTVMXSRIVGTTAYMAPE 205
Query: 225 VLKRNYGPEIDIWSAGVILYILLCGVP 251
L+ P+ DI+S GV+L ++ G+P
Sbjct: 206 ALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 135/343 (39%), Gaps = 70/343 (20%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTR----ELLACKSISKRKLRTAVDIDDVRREVAI 104
+++RY + LG G FG C+D L K++ K K ++I+ + + I
Sbjct: 31 LQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEK---I 87
Query: 105 MKHLPKNSSI-VSLKEACEDDNAVHLVMELCEGGELFDRIVARGH--YTERAAAAVTRTI 161
+ P N ++ V + + + + + EL G FD + + Y + +
Sbjct: 88 NEKDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQL 146
Query: 162 VEVVQLCHKHGVIHRDLKPENFLFANKK----------------ENSPLKAIDFGLSIFF 205
+ V+ H + + H DLKPEN LF N +++ ++ +DFG + F
Sbjct: 147 CQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF- 205
Query: 206 KPGERFSEIVGSPYYMAPEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQ---GV 261
E S IV + +Y APEV L+ + D+WS G I++ G F + +
Sbjct: 206 -DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 264
Query: 262 AQAIL------------------RGLIDFKRDPWPN--VSESAKSLVR------------ 289
+ IL RG +D+ + V E+ K L R
Sbjct: 265 MERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQL 324
Query: 290 -----QMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVR 327
MLE +P RLT + L+HP+ + P L D R
Sbjct: 325 FDLIESMLEYEPAKRLTLGEALQHPFFARLRAEPPNKLWDSSR 367
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVILYILLC 248
L Y +DIWS G I+ ++C
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVC 220
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRD-TRELLACKSISKRKLRTAVDIDDVRREVAIM 105
D+ + + LG G FG + ID+D +E + + T D+ D+ E+ +M
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR----------------GHY 149
K + K+ +I++L AC D +++++E G L + + AR
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 150 TERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
T + + T + ++ IHRDL N L EN+ +K DFGL+ +
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVT---ENNVMKIADFGLARDINNID 198
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+++ I G P+ + + +
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 258
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 259 LKEG---HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 298
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 25/207 (12%)
Query: 58 ELGRGEFGVTYLCIDRDT----RELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSS 113
++G G FGV Y +T ++L A I+ +L+ D +E+ +M ++ +
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD-----QEIKVMAKC-QHEN 91
Query: 114 IVSLKEACEDDNAVHLVMELCEGGELFDRIV---ARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L D + + LV G L DR+ + + + + H+
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE------IVGSPYYMAPE 224
+ IHRD+K N L E K DFGL+ + E+F++ IVG+ YMAPE
Sbjct: 152 NHHIHRDIKSANILL---DEAFTAKISDFGLA---RASEKFAQTVMXXRIVGTTAYMAPE 205
Query: 225 VLKRNYGPEIDIWSAGVILYILLCGVP 251
L+ P+ DI+S GV+L ++ G+P
Sbjct: 206 ALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRD-TRELLACKSISKRKLRTAVDIDDVRREVAIM 105
D+ + + LG G FG + ID+D +E + + T D+ D+ E+ +M
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR----------------GHY 149
K + K+ +I++L AC D +++++E G L + + AR
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 150 TERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
T + + T + ++ IHRDL N L EN+ +K DFGL+ +
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNID 200
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+++ I G P+ + + +
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 260
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 261 LKEG---HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 300
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 25/207 (12%)
Query: 58 ELGRGEFGVTYLCIDRDT----RELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSS 113
++G G FGV Y +T ++L A I+ +L+ D +E+ +M ++ +
Sbjct: 32 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD-----QEIKVMAKC-QHEN 85
Query: 114 IVSLKEACEDDNAVHLVMELCEGGELFDRIV---ARGHYTERAAAAVTRTIVEVVQLCHK 170
+V L D + + LV G L DR+ + + + + H+
Sbjct: 86 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 145
Query: 171 HGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE------IVGSPYYMAPE 224
+ IHRD+K N L E K DFGL+ + E+F++ IVG+ YMAPE
Sbjct: 146 NHHIHRDIKSANILL---DEAFTAKISDFGLA---RASEKFAQXVMXXRIVGTTAYMAPE 199
Query: 225 VLKRNYGPEIDIWSAGVILYILLCGVP 251
L+ P+ DI+S GV+L ++ G+P
Sbjct: 200 ALRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRD-TRELLACKSISKRKLRTAVDIDDVRREVAIM 105
D+ + + LG G FG + ID+D +E + + T D+ D+ E+ +M
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR----------------GHY 149
K + K+ +I++L AC D +++++E G L + + AR
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 150 TERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
T + + T + ++ IHRDL N L EN+ +K DFGL+ +
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNID 203
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+++ I G P+ + + +
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 263
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 264 LKEG---HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 303
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 126 AVHLVMELCEGGELFDRIVAR-GHYTERAAA-AVTRTIVEVVQLCHKHGVIHRDLKPENF 183
+ + ME C+ G L I R G ++ A + I + V H +IHRDLKP N
Sbjct: 108 CLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNI 167
Query: 184 LFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVI 242
+ K+ +K DFGL K + + G+ YM+PE + ++YG E+D+++ G+I
Sbjct: 168 FLVDTKQ---VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 243 LYILL--CG----VPPFWAESEQGV--------AQAILRGLIDFKRDPWPNVSESAKSLV 288
L LL C F+ + G+ + +L+ L+ K + PN SE ++L
Sbjct: 225 LAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 284
Query: 289 RQMLEPDPKLRLTA 302
P+ R T
Sbjct: 285 VWKKSPEKNERHTC 298
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 120/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRD-TRELLACKSISKRKLRTAVDIDDVRREVAIM 105
D+ + + LG G FG + ID+D +E + + T D+ D+ E+ +M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR----------------GHY 149
K + K+ +I++L AC D +++++E G L + + AR
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 150 TERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
T + + T + ++ IHRDL N L EN+ ++ DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMRIADFGLARDINNID 211
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+++ I G P+ + + +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 272 LKEG---HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 109/253 (43%), Gaps = 19/253 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 27 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 84
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + + +
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 142
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ V + YY APEV
Sbjct: 143 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEV 198
Query: 226 -LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESA 284
L Y +DIWS G I+ ++ G F ++ L P P +
Sbjct: 199 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL----GTPCPEFMKKL 254
Query: 285 KSLVRQMLEPDPK 297
+ VR +E PK
Sbjct: 255 QPTVRTYVENRPK 267
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 110/253 (43%), Gaps = 19/253 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ + V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESA 284
L Y +DIWS G I+ ++ G F ++ L P P +
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL----GTPCPEFMKKL 252
Query: 285 KSLVRQMLEPDPK 297
+ VR +E PK
Sbjct: 253 QPTVRTYVENRPK 265
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKL-RTAVDIDDVRREVAIM 105
DR ++ + LG G FG L +D+D + ++ K T D+ D+ E+ +M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR-----------GHYTERAA 154
K + K+ +I++L AC D +++++E G L + + AR H E
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 155 A-----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
+ + + ++ IHRDL N L E++ +K DFGL+ +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHID 204
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+L+ I G P+ + + +
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 265 LKEG---HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 119/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRD-TRELLACKSISKRKLRTAVDIDDVRREVAIM 105
D+ + + LG G FG + ID+D +E + + T D+ D+ E+ +M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR----------------GHY 149
K + K+ +I++L AC D +++++E G L + + AR
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 150 TERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
T + + T + ++ IHRDL N L EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNID 211
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ +MAPE L R Y + D+WS GV+++ I G P+ + + +
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 272 LKEG---HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKL-RTAVDIDDVRREVAIM 105
DR ++ + LG G FG L +D+D + ++ K T D+ D+ E+ +M
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR-----------GHYTERAA 154
K + K+ +I++L AC D +++++E G L + + AR H E
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 155 A-----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
+ + + ++ IHRDL N L E++ +K DFGL+ +
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHID 245
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+L+ I G P+ + + +
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 305
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 306 LKEG---HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKL-RTAVDIDDVRREVAIM 105
DR ++ + LG G FG L +D+D + ++ K T D+ D+ E+ +M
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR-----------GHYTERAA 154
K + K+ +I++L AC D +++++E G L + + AR H E
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 155 A-----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
+ + + ++ IHRDL N L E++ +K DFGL+ +
Sbjct: 140 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHID 196
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+L+ I G P+ + + +
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 256
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 257 LKEG---HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 296
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKL-RTAVDIDDVRREVAIM 105
DR ++ + LG G FG L +D+D + ++ K T D+ D+ E+ +M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR-----------GHYTERAA 154
K + K+ +I++L AC D +++++E G L + + AR H E
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 155 A-----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
+ + + ++ IHRDL N L E++ +K DFGL+ +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHID 204
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+L+ I G P+ + + +
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 265 LKEG---HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 14/151 (9%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L EE+E+++E F++ D D DG ++ +L +R G E E+ L + ++ N G +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 411 DYGEFL-----AVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALM-----EDGA 460
D+ +F+ +L M + L AF FD +G+G I +ELR+A+ + G
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 124
Query: 461 DDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
D ++ D VD + DG + ++EFV MM
Sbjct: 125 RDIEEIIRD----VDLNGDGRVDFEEFVRMM 151
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 345 RVIAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRN-FGSQLAESEVQMLIEAVD 403
+++AE + V+++++ F++ D++ DG +ST EL+ +R G Q+ +++ +I VD
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD 135
Query: 404 TNGKGTLDYGEFLAVL 419
NG G +D+ EF+ ++
Sbjct: 136 LNGDGRVDFEEFVRMM 151
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRD-TRELLACKSISKRKLRTAVDIDDVRREVAIM 105
D+ + + LG G FG + ID+D +E + + T D+ D+ E+ +M
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR----------------GHY 149
K + K+ +I++L AC D +++++E G L + + AR
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 150 TERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
T + + T + ++ IHRDL N L EN+ +K DFGL+ +
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNID 257
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+++ I G P+ + + +
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 317
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 318 LKEG---HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKL-RTAVDIDDVRREVAIM 105
DR ++ + LG G FG L +D+D + ++ K T D+ D+ E+ +M
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR-----------GHYTERAA 154
K + K+ +I++L AC D +++++E G L + + AR H E
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 155 A-----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
+ + + ++ IHRDL N L E++ +K DFGL+ +
Sbjct: 137 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHID 193
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+L+ I G P+ + + +
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 253
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 254 LKEG---HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 293
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 133/311 (42%), Gaps = 53/311 (17%)
Query: 50 EDRYLVD----RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDI---------- 95
+D+Y+ D R L +G+F LC ++D + A K K L D
Sbjct: 26 KDKYINDYRIIRTLNQGKFNKIILC-EKDNK-FYALKKYEKSLLEKKRDFTKSNNDKISI 83
Query: 96 ----DDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL--FDR--IVARG 147
DD + E+ I+ + KN ++ + + + V+++ E E + FD V
Sbjct: 84 KSKYDDFKNELQIITDI-KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK 142
Query: 148 HYTERAAAAVTRTIVEVV-----QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS 202
+YT V + I++ V + ++ + HRD+KP N L +N +K DFG S
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD---KNGRVKLSDFGES 199
Query: 203 IFFKPGERFSEIVGSPYYMAPEVL--KRNY-GPEIDIWSAGVILYILLCGVPPFWAE-SE 258
+ ++ G+ +M PE + +Y G ++DIWS G+ LY++ V PF + S
Sbjct: 200 EYM-VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL 258
Query: 259 QGVAQAILRGLIDFKRD------PWPNVSESAKS---------LVRQMLEPDPKLRLTAK 303
+ I I++ D P N + + ++ L +P R+T++
Sbjct: 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE 318
Query: 304 QVLEHPWLQNA 314
L+H WL +
Sbjct: 319 DALKHEWLADT 329
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 14/151 (9%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L EE+E+++E F++ D D DG ++ +L +R G E E+ L + ++ N G +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 411 DYGEFL-----AVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALM-----EDGA 460
D+ +F+ +L M + L AF FD +G+G I +ELR+A+ + G
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGH 124
Query: 461 DDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
D ++ D VD + DG + ++EFV MM
Sbjct: 125 RDIEEIIRD----VDLNGDGRVDFEEFVRMM 151
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 345 RVIAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRN-FGSQLAESEVQMLIEAVD 403
+++AE + V+++++ F++ D++ DG +ST EL+ +R G Q+ +++ +I VD
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVD 135
Query: 404 TNGKGTLDYGEFLAVL 419
NG G +D+ EF+ ++
Sbjct: 136 LNGDGRVDFEEFVRMM 151
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 119/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRD-TRELLACKSISKRKLRTAVDIDDVRREVAIM 105
D+ + + LG G FG + ID+D +E + + T D+ D+ E+ +M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR----------------GHY 149
K + K+ +I++L AC D +++++E G L + + AR
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 150 TERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
T + + T + ++ IHRDL N L EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNID 211
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ +MAPE L R Y + D+WS GV+++ I G P+ + + +
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 272 LKEG---HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 66.6 bits (161), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 351 LSVEEVEDIKEMFKKIDS-DNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGT 409
LS +V+ ++ F+ ++ + G VSTD++ L G Q +S ++ LI+ D G G
Sbjct: 7 LSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGD 66
Query: 410 LDYGEFLAV-LLHLRRMANDEH----LHKAFSYFDKDGNGYIEPNELRDALMEDGADDCT 464
+D+ F + L N E L +AF +DK+GNGYI + +R+ L E +
Sbjct: 67 IDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSS 126
Query: 465 DVANDIFQEVDTDKDGLISYDEFVAMMKTGTD 496
+ + + E+D D G + ++EF+ +M G +
Sbjct: 127 EDLDAMIDEIDADGSGTVDFEEFMGVMTGGDE 158
Score = 49.3 bits (116), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 337 NRFKRKALRVIAEFLSVEEVE-DIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEV 395
+ FK R + E ++ E+++ +++E F+ D + +G +STD ++ L L+ ++
Sbjct: 70 DSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDL 129
Query: 396 QMLIEAVDTNGKGTLDYGEFLAVL 419
+I+ +D +G GT+D+ EF+ V+
Sbjct: 130 DAMIDEIDADGSGTVDFEEFMGVM 153
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKL-RTAVDIDDVRREVAIM 105
DR ++ + LG G FG L +D+D + ++ K T D+ D+ E+ +M
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR-----------GHYTERAA 154
K + K+ +I++L AC D +++++E G L + + AR H E
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 155 A-----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
+ + + ++ IHRDL N L E++ +K DFGL+ +
Sbjct: 141 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHID 197
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+L+ I G P+ + + +
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 257
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 258 LKEG---HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 297
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKL-RTAVDIDDVRREVAIM 105
DR ++ + LG G FG L +D+D + ++ K T D+ D+ E+ +M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR-----------GHYTERAA 154
K + K+ +I++L AC D +++++E G L + + AR H E
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 155 A-----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
+ + + ++ IHRDL N L E++ +K DFGL+ +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHID 204
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+L+ I G P+ + + +
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 265 LKEG---HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRD-TRELLACKSISKRKLRTAVDIDDVRREVAIM 105
D+ + + LG G FG + ID+D +E + + T D+ D+ E+ +M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR----------------GHY 149
K + K+ +I++L AC D +++++ G L + + AR
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 150 TERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
T + + T + ++ IHRDL N L EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNID 211
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+++ I G P+ + + +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 272 LKEG---HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY + +G G G+ D +A K +S R + RE+ +MK + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCV-NH 82
Query: 112 SSIVSL------KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVV 165
+I+ L +++ E+ V++VMEL + +++ ER + + + + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 166 QLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEV 225
L H G+IHRDLKP N + K + LK +DFGL+ V + YY APEV
Sbjct: 141 HL-HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 226 -LKRNYGPEIDIWSAGVILYILLC 248
L Y +D+WS G I+ ++C
Sbjct: 197 ILGMGYKENVDLWSVGCIMGEMVC 220
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 56 DRELGRGEFGVTYLCIDRDTRELLACKSI----SKRKLRTAVDIDDVRREVAIMKHLPKN 111
++++G+G FG+ + + ++A KS+ S+ + + +REV IM +L +
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NH 82
Query: 112 SSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEV---VQLC 168
+IV L N +VME G+L+ R++ + H + + R ++++ ++
Sbjct: 83 PNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALGIEYM 138
Query: 169 HKHG--VIHRDLKPENFLFANKKENSPL--KAIDFGLSIFFKPGERFSEIVGSPYYMAPE 224
++HRDL+ N + EN+P+ K DFGLS + S ++G+ +MAPE
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAPE 196
Query: 225 VL---KRNYGPEIDIWSAGVILYILLCGVPPF 253
+ + +Y + D +S +ILY +L G PF
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKL-RTAVDIDDVRREVAIM 105
DR ++ + LG G FG L +D+D + ++ K T D+ D+ E+ +M
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR-----------GHYTERAA 154
K + K+ +I++L AC D +++++E G L + + AR H E
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 155 A-----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
+ + + ++ IHRDL N L E++ +K DFGL+ +
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHID 189
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+L+ I G P+ + + +
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 249
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 250 LKEG---HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRD-TRELLACKSISKRKLRTAVDIDDVRREVAIM 105
D+ + + LG G FG + ID+D +E + + T D+ D+ E+ +M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR----------------GHY 149
K + K+ +I++L AC D +++++ G L + + AR
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 150 TERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
T + + T + ++ IHRDL N L EN+ +K DFGL+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNID 211
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ + +MAPE L R Y + D+WS GV+++ I G P+ + + +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 272 LKEG---HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 134/289 (46%), Gaps = 39/289 (13%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LG+G FG R+T E++ K + + T +EV +M+ L ++ +++
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ---RTFLKEVKVMRCL-EHPNVLKFI 73
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVAR-GHYTERAAAAVTRTIVEVVQLCHKHGVIHRD 177
D ++ + E +GG L I + Y + + I + H +IHRD
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRD 133
Query: 178 LKPENFLFANKKENSPLKAIDFGLSIFF--------------KP--GERFSEIVGSPYYM 221
L N L +EN + DFGL+ KP +R++ +VG+PY+M
Sbjct: 134 LNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT-VVGNPYWM 189
Query: 222 APEVLK-RNYGPEIDIWSAGVILYILLCGV---PPFWAES-EQGVAQAILRGLIDFKRDP 276
APE++ R+Y ++D++S G++L ++ V P + + + G+ +RG +D R
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN---VRGFLD--RYC 244
Query: 277 WPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKK--APNVPLG 323
PN S + + + DP+ R + + LEH WL+ + A ++PLG
Sbjct: 245 PPNCPPSFFPITVRCCDLDPEKRPSFVK-LEH-WLETLRMHLAGHLPLG 291
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 29/184 (15%)
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYY 220
+ V H G+ HRD+KP+N L N K+N+ LK DFG + P E + S +Y
Sbjct: 150 LFRAVGFIHSLGICHRDIKPQN-LLVNSKDNT-LKLCDFGSAKKLIPSEPSVAXICSRFY 207
Query: 221 MAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPFWAES--EQGVAQAILRG-------- 268
APE++ Y P ID+WS G + L+ G P F E+ +Q V + G
Sbjct: 208 RAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMI 267
Query: 269 ----------LIDFKRDPW----PNVSES-AKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
K W P + S A L+ Q+L +P LR+ + + HP+ +
Sbjct: 268 RMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH 327
Query: 314 AKKA 317
+ +
Sbjct: 328 LRNS 331
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 32/283 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKL-RTAVDIDDVRREVAIM 105
DR ++ + LG G FG L +D+D + ++ K T D+ D+ E+ +M
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 106 KHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR-----------GHYTERAA 154
K + K+ +I++L AC D +++++E G L + + AR H E
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 155 A-----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE 209
+ + + ++ IHRDL N L E++ +K DFGL+ +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHID 204
Query: 210 RFSEIVGSPY---YMAPEVL-KRNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQA 264
+ +MAPE L R Y + D+WS GV+L+ I G P+ + + +
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 265 ILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
+ G + D N + ++R P R T KQ++E
Sbjct: 265 LKEG---HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 136/311 (43%), Gaps = 47/311 (15%)
Query: 39 TVLAGVPKENIEDRYLVDRELGRGEFGVTYL------CIDRDTRELLACKSISKRKLRTA 92
T + + + NI ++ RELG G FG +L C ++D + L+A K+ L+ A
Sbjct: 5 TFVQHIKRHNI----VLKRELGEGAFGKVFLAECYNLCPEQD-KILVAVKT-----LKDA 54
Query: 93 VD--IDDVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARG--- 147
D D RE ++ +L ++ IV C + + + +V E + G+L + A G
Sbjct: 55 SDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDA 113
Query: 148 ----------HYTERAAAAVTRTIVE-VVQLCHKHGVIHRDLKPENFLFANKKENSPLKA 196
T+ + + I +V L +H +HRDL N L EN +K
Sbjct: 114 VLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVG---ENLLVKI 169
Query: 197 IDFGLS--IFFKPGERFSEIVGSPY-YMAPE-VLKRNYGPEIDIWSAGVILY-ILLCGVP 251
DFG+S ++ R P +M PE ++ R + E D+WS GV+L+ I G
Sbjct: 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ 229
Query: 252 PFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
P++ S V + I +G + + P + L+ + +P +R K + H L
Sbjct: 230 PWYQLSNNEVIECITQGRVLQRPRTCP---QEVYELMLGCWQREPHMRKNIKGI--HTLL 284
Query: 312 QNAKKAPNVPL 322
QN KA V L
Sbjct: 285 QNLAKASPVYL 295
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 126 AVHLVMELCEGGELFDRIVAR-GHYTERAAA-AVTRTIVEVVQLCHKHGVIHRDLKPENF 183
+ + ME C+ G L I R G ++ A + I + V H +I+RDLKP N
Sbjct: 94 CLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNI 153
Query: 184 LFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVI 242
+ K+ +K DFGL K + G+ YM+PE + ++YG E+D+++ G+I
Sbjct: 154 FLVDTKQ---VKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 210
Query: 243 LYILL--CG----VPPFWAESEQGV--------AQAILRGLIDFKRDPWPNVSESAKSLV 288
L LL C F+ + G+ + +L+ L+ K + PN SE ++L
Sbjct: 211 LAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270
Query: 289 RQMLEPDPKLRLTA 302
P+ R TA
Sbjct: 271 VWKKSPEKNERHTA 284
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSL 117
ELG G GV R + ++A K I +++ A+ + + RE+ ++ H + IV
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLI-HLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 79
Query: 118 KEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVE-VVQLCHKHGVIHR 176
A D + + ME +GG L + E V+ ++ + L KH ++HR
Sbjct: 80 YGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHR 139
Query: 177 DLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF----SEIVGSPYYMAPEVLK-RNYG 231
D+KP N L ++ E +K DFG+S G+ + VG+ YMAPE L+ +Y
Sbjct: 140 DVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMAPERLQGTHYS 191
Query: 232 PEIDIWSAGVILYILLCG---VPP 252
+ DIWS G+ L L G +PP
Sbjct: 192 VQSDIWSMGLSLVELAVGRYPIPP 215
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 43/235 (18%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
I DRY + +G G +G D+ + ++A K I R +D + RE+AI+ L
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKIL-RVFEDLIDCKRILREIAILNRL 109
Query: 109 PKNSSI----VSLKEACEDDNAVHLVMELCEG--GELFDRIVARGHYTERAAAAVTRTIV 162
+ + + + + E + +++V+E+ + +LF V + TE + ++
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV---YLTELHIKTLLYNLL 166
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS------------IFFKPGER 210
V+ H G++HRDLKP N L ++ +K DFGL+ + P E
Sbjct: 167 VGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLARTVDYPENGNSQLPISPRED 223
Query: 211 FSEIVGSP----------------YYMAPE--VLKRNYGPEIDIWSAGVILYILL 247
+V P +Y APE +L+ NY ID+WS G I LL
Sbjct: 224 DMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 19/254 (7%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LGRG FG + D+ T A K V ++ R E + + IV L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKK---------VRLEVFRAEELMACAGLTSPRIVPLY 151
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
A + V++ MEL EGG L + +G E A +E ++ H ++H D+
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 211
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERF---SEIVGSPYYMAPE-VLKRNYG 231
K +N L ++ ++ L DFG ++ +P G+ I G+ +MAPE VL R+
Sbjct: 212 KADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD 269
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQM 291
++D+WS+ ++ +L G P W + +G + R+ P+ + +++
Sbjct: 270 AKVDVWSSCCMMLHMLNGCHP-WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEG 328
Query: 292 LEPDPKLRLTAKQV 305
L +P R++A ++
Sbjct: 329 LRKEPIHRVSAAEL 342
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 56 DRELGRGEFGVTYLCIDRDTRELLACKSI----SKRKLRTAVDIDDVRREVAIMKHLPKN 111
++++G+G FG+ + + ++A KS+ S+ + + +REV IM +L +
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NH 82
Query: 112 SSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEV---VQLC 168
+IV L N +VME G+L+ R++ + H + + R ++++ ++
Sbjct: 83 PNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALGIEYM 138
Query: 169 HKHG--VIHRDLKPENFLFANKKENSPL--KAIDFGLSIFFKPGERFSEIVGSPYYMAPE 224
++HRDL+ N + EN+P+ K DFG S + S ++G+ +MAPE
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQWMAPE 196
Query: 225 VL---KRNYGPEIDIWSAGVILYILLCGVPPF 253
+ + +Y + D +S +ILY +L G PF
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 19/254 (7%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LGRG FG + D+ T A K V ++ R E + + IV L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKK---------VRLEVFRAEELMACAGLTSPRIVPLY 132
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
A + V++ MEL EGG L + +G E A +E ++ H ++H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 192
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIV------GSPYYMAPE-VLKRNYG 231
K +N L ++ ++ L DFG ++ +P +++ G+ +MAPE VL R+
Sbjct: 193 KADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD 250
Query: 232 PEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAKSLVRQM 291
++D+WS+ ++ +L G P W + +G + R+ P+ + +++
Sbjct: 251 AKVDVWSSCCMMLHMLNGCHP-WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEG 309
Query: 292 LEPDPKLRLTAKQV 305
L +P R++A ++
Sbjct: 310 LRKEPIHRVSAAEL 323
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 39/275 (14%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSI-----SKRKLRTAVDIDDVRREVAIMKHLPKNS 112
ELGRG +GV + +++A K I S+ + R +D+D R V
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC-------P 110
Query: 113 SIVSLKEACEDDNAVHLVMELCEGG--ELFDRIVARGH-YTERAAAAVTRTIVEVVQLCH 169
V+ A + V + MEL + + + +++ +G E + +IV+ ++ H
Sbjct: 111 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 170
Query: 170 -KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL-- 226
K VIHRD+KP N L + +K DFG+S + + G YMAPE +
Sbjct: 171 SKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINP 227
Query: 227 ---KRNYGPEIDIWSAGVILYILLCGVPPF--WAESEQGVAQAILRGLIDFKRDPWPNVS 281
++ Y + DIWS G+ + L P+ W Q + Q + +P P +
Sbjct: 228 ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV--------EEPSPQLP 279
Query: 282 ESAKS-----LVRQMLEPDPKLRLTAKQVLEHPWL 311
S Q L+ + K R T ++++HP+
Sbjct: 280 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 20/225 (8%)
Query: 57 RELGRGEFGVTYL--CIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+E+G G+FG+ +L +++D +A K+I + + DD E +M L + +
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDK---VAIKTIKEGSMSE----DDFIEEAEVMMKL-SHPKL 84
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
V L C + + LV E E G L D + RG + + + E + + V
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 144
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY---YMAPEVLK-RN 229
IHRDL N L EN +K DFG++ F ++++ G+ + + +PEV
Sbjct: 145 IHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 200
Query: 230 YGPEIDIWSAGVILYILLC-GVPPFWAESEQGVAQAILRGLIDFK 273
Y + D+WS GV+++ + G P+ S V + I G +K
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 245
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 56 DRELGRGEFGVTYLCIDRDTRELLACKSI----SKRKLRTAVDIDDVRREVAIMKHLPKN 111
++++G+G FG+ + + ++A KS+ S+ + + +REV IM +L +
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NH 82
Query: 112 SSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEV---VQLC 168
+IV L N +VME G+L+ R++ + H + + R ++++ ++
Sbjct: 83 PNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALGIEYM 138
Query: 169 HKHG--VIHRDLKPENFLFANKKENSPL--KAIDFGLSIFFKPGERFSEIVGSPYYMAPE 224
++HRDL+ N + EN+P+ K DF LS + S ++G+ +MAPE
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQWMAPE 196
Query: 225 VL---KRNYGPEIDIWSAGVILYILLCGVPPF 253
+ + +Y + D +S +ILY +L G PF
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 100/217 (46%), Gaps = 37/217 (17%)
Query: 52 RYLVD-RELGRGEFG-VTYLCIDRD---TRELLACKSI---SKRKLRTAVDIDDVRREVA 103
RYL R+LG G FG V+ C D T E++A K++ + + R+ ++E+
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGW-----KQEID 85
Query: 104 IMKHLPKNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAAAVTRTI 161
I++ L + I+ K CED A + LVME G L D Y R + + + +
Sbjct: 86 ILRTL-YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRD-------YLPRHSIGLAQLL 137
Query: 162 VEVVQLC------HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGE---RFS 212
+ Q+C H IHRDL N L N + +K DFGL+ G R
Sbjct: 138 LFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRL---VKIGDFGLAKAVPEGHEXYRVR 194
Query: 213 EIVGSP-YYMAPEVLKR-NYGPEIDIWSAGVILYILL 247
E SP ++ APE LK + D+WS GV LY LL
Sbjct: 195 EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 57 RELGRGEFGVTYL--CIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+E+G G+FG+ +L +++D +A K+I + A+ +D E +M L + +
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDK---VAIKTIRE----GAMSEEDFIEEAEVMMKL-SHPKL 64
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
V L C + + LV E E G L D + RG + + + E + + V
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASV 124
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY---YMAPEVLK-RN 229
IHRDL N L EN +K DFG++ F ++++ G+ + + +PEV
Sbjct: 125 IHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 230 YGPEIDIWSAGVILYILLC-GVPPFWAESEQGVAQAILRGLIDFK 273
Y + D+WS GV+++ + G P+ S V + I G +K
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 225
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
V + +G G FG Y +A K ++ T + + EV +++ + +
Sbjct: 16 VGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVA-RGHYTERAAAAVTRTIVEVVQLCHKHGV 173
+ + + + A+ V + CEG L+ + A + + + R + H +
Sbjct: 72 LFMGYSTKPQLAI--VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 129
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIF---FKPGERFSEIVGSPYYMAPEVLKRN- 229
IHRDLK N E++ +K DFGL+ + +F ++ GS +MAPEV++
Sbjct: 130 IHRDLKSNNIFL---HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 230 ---YGPEIDIWSAGVILYILLCGVPPF 253
Y + D+++ G++LY L+ G P+
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Query: 354 EEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYG 413
E+ ++I E F D +NDG + ELK ++ G +L + E+ LI+ D+ G+ + Y
Sbjct: 20 EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYD 79
Query: 414 EFLAVLLH--LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIF 471
+F V+ L+R DE + +AF FD D G I LR E G + +
Sbjct: 80 DFYIVMGEKILKRDPLDE-IKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMI 138
Query: 472 QEVDTDKDGLISYDEFVAM 490
+E D D DG I+ +EF+A+
Sbjct: 139 EEFDLDGDGEINENEFIAI 157
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 136/331 (41%), Gaps = 73/331 (22%)
Query: 46 KENIEDRYLVDR-ELGRGEFGVTYLCIDRDTREL--LACKSISKRKLRTAVDIDDVRREV 102
+E +ED + + ++GRG +G Y +D ++ A K I T + + R E+
Sbjct: 15 RERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG----TGISMSACR-EI 69
Query: 103 AIMKHLPKNSSIVSLKEA--CEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTR- 159
A+++ L K+ +++SL++ D V L+ + E R + + R
Sbjct: 70 ALLREL-KHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 160 -------TIVEVVQLCHKHGVIHRDLKPENFLFANK-KENSPLKAIDFGLSIFF----KP 207
I++ + H + V+HRDLKP N L + E +K D G + F KP
Sbjct: 129 MVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 188
Query: 208 GERFSEIVGSPYYMAPEVL--KRNYGPEIDIWSAGVILYILLCGVPPF------------ 253
+V + +Y APE+L R+Y IDIW+ G I LL P F
Sbjct: 189 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 248
Query: 254 --------------------WAESEQGVAQAILRGLIDFKRDPWPNVS------------ 281
W + ++ + L + DF+R+ + N S
Sbjct: 249 YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTL--MKDFRRNTYTNCSLIKYMEKHKVKP 306
Query: 282 -ESAKSLVRQMLEPDPKLRLTAKQVLEHPWL 311
A L++++L DP R+T++Q ++ P+
Sbjct: 307 DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 337
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 48 NIEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDDVRREV 102
E+R+L ++LG+G FG +C + +T E++A K + T + D RE+
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREI 65
Query: 103 AIMKHLPKNSSIVSLKEACEDDN--AVHLVMELCEGGELFDRIVARGHYTERAAA-AVTR 159
I+K L ++ +IV K C + L+ME G L D + A + T
Sbjct: 66 EILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS 124
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---KPGERFSEIVG 216
I + ++ IHRDL N L N+ +K DFGL+ K + E
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 217 SP-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
SP ++ APE L + + D+WS GV+LY L +
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
V + +G G FG Y +A K ++ T + + EV +++ + +
Sbjct: 28 VGQRIGSGSFGTVY---KGKWHGDVAVKMLNV-TAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVA-RGHYTERAAAAVTRTIVEVVQLCHKHGV 173
+ + + + A+ V + CEG L+ + A + + + R + H +
Sbjct: 84 LFMGYSTKPQLAI--VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSI---FFKPGERFSEIVGSPYYMAPEVLKRN- 229
IHRDLK N E++ +K DFGL+ + +F ++ GS +MAPEV++
Sbjct: 142 IHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 230 ---YGPEIDIWSAGVILYILLCGVPPF 253
Y + D+++ G++LY L+ G P+
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 57 RELGRGEFGVTYL--CIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+E+G G+FG+ +L +++D +A K+I + A+ +D E +M L + +
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDK---VAIKTIRE----GAMSEEDFIEEAEVMMKL-SHPKL 67
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
V L C + + LV E E G L D + RG + + + E + + V
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 127
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY---YMAPEVLK-RN 229
IHRDL N L EN +K DFG++ F ++++ G+ + + +PEV
Sbjct: 128 IHRDLAARNCLVG---ENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSR 183
Query: 230 YGPEIDIWSAGVILYILLC-GVPPFWAESEQGVAQAILRGLIDFK 273
Y + D+WS GV+++ + G P+ S V + I G +K
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 228
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 57 RELGRGEFGVTYL--CIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+E+G G+FG+ +L +++D +A K+I + A+ +D E +M L + +
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDK---VAIKTIRE----GAMSEEDFIEEAEVMMKL-SHPKL 64
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
V L C + + LV E E G L D + RG + + + E + + V
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 124
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY---YMAPEVLK-RN 229
IHRDL N L EN +K DFG++ F ++++ G+ + + +PEV
Sbjct: 125 IHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 230 YGPEIDIWSAGVILYILLC-GVPPFWAESEQGVAQAILRGLIDFK 273
Y + D+WS GV+++ + G P+ S V + I G +K
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 225
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 129 LVMELCEGGELFDRIVA-RGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFAN 187
+V + CEG L+ + A + + + R + H +IHRDLK N
Sbjct: 96 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL-- 153
Query: 188 KKENSPLKAIDFGLSI---FFKPGERFSEIVGSPYYMAPEVLKRN----YGPEIDIWSAG 240
E++ +K DFGL+ + +F ++ GS +MAPEV++ Y + D+++ G
Sbjct: 154 -HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 241 VILYILLCGVPPF 253
++LY L+ G P+
Sbjct: 213 IVLYELMTGQLPY 225
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 57 RELGRGEFGVTYL--CIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+E+G G+FG+ +L +++D +A K+I + A+ +D E +M L + +
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDK---VAIKTIRE----GAMSEEDFIEEAEVMMKL-SHPKL 62
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
V L C + + LV E E G L D + RG + + + E + + V
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 122
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY---YMAPEVLK-RN 229
IHRDL N L EN +K DFG++ F ++++ G+ + + +PEV
Sbjct: 123 IHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 178
Query: 230 YGPEIDIWSAGVILYILLC-GVPPFWAESEQGVAQAILRGLIDFK 273
Y + D+WS GV+++ + G P+ S V + I G +K
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 223
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 116/275 (42%), Gaps = 39/275 (14%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSI-----SKRKLRTAVDIDDVRREVAIMKHLPKNS 112
ELGRG +GV + +++A K I S+ + R +D+D R V
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV-------DCP 66
Query: 113 SIVSLKEACEDDNAVHLVMELCEGG--ELFDRIVARGHYT-ERAAAAVTRTIVEVVQLCH 169
V+ A + V + MEL + + + +++ +G E + +IV+ ++ H
Sbjct: 67 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 126
Query: 170 -KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL-- 226
K VIHRD+KP N L + +K DFG+S + G YMAPE +
Sbjct: 127 SKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINP 183
Query: 227 ---KRNYGPEIDIWSAGVILYILLCGVPPF--WAESEQGVAQAILRGLIDFKRDPWPNVS 281
++ Y + DIWS G+ + L P+ W Q + Q + +P P +
Sbjct: 184 ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV--------EEPSPQLP 235
Query: 282 ESAKS-----LVRQMLEPDPKLRLTAKQVLEHPWL 311
S Q L+ + K R T ++++HP+
Sbjct: 236 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 57 RELGRGEFGVTYL--CIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+E+G G+FG+ +L +++D +A K+I + A+ +D E +M L + +
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDK---VAIKTIRE----GAMSEEDFIEEAEVMMKL-SHPKL 65
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
V L C + + LV E E G L D + RG + + + E + + V
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 125
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY---YMAPEVLK-RN 229
IHRDL N L EN +K DFG++ F ++++ G+ + + +PEV
Sbjct: 126 IHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 181
Query: 230 YGPEIDIWSAGVILYILLC-GVPPFWAESEQGVAQAILRGLIDFK 273
Y + D+WS GV+++ + G P+ S V + I G +K
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 226
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 54 LVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSS 113
++ +G G FG Y + K + T R EVA+++ +
Sbjct: 39 MLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDP----TPEQFQAFRNEVAVLRKTRHVNI 94
Query: 114 IVSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHG 172
++ + +D+ A+ V + CEG L+ + V + + R + + H
Sbjct: 95 LLFMGYMTKDNLAI--VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN 152
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIF---FKPGERFSEIVGSPYYMAPEVLKRN 229
+IHRD+K N E +K DFGL+ + ++ + GS +MAPEV++
Sbjct: 153 IIHRDMKSNNIFL---HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 230 ----YGPEIDIWSAGVILYILLCGVPPF 253
+ + D++S G++LY L+ G P+
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 33/127 (25%)
Query: 169 HKHGVIHRDLKPENFLFANKKENSPLKAIDFGL--------------------------- 201
H+ G++HRD+KP NFL+ + + L +DFGL
Sbjct: 134 HQFGIVHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELLKFVQSEAQQERCSQN 191
Query: 202 --SIFFKPGERFSEIVGSPYYMAPEVLKR--NYGPEIDIWSAGVILYILLCGVPPFWAES 257
SI ++ + G+P + APEVL + N ID+WSAGVI LL G PF+ S
Sbjct: 192 KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251
Query: 258 EQGVAQA 264
+ A A
Sbjct: 252 DDLTALA 258
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
V + +G G FG Y +A K ++ T + + EV +++ + +
Sbjct: 17 VGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
+ + + + A+ V + CEG L+ + + + + R + + H +
Sbjct: 73 LFMGYSTKPQLAI--VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIF---FKPGERFSEIVGSPYYMAPEVL---- 226
IHRDLK N E+ +K DFGL+ + +F ++ GS +MAPEV+
Sbjct: 131 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPF 253
K Y + D+++ G++LY L+ G P+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
V + +G G FG Y +A K ++ T + + EV +++ + +
Sbjct: 17 VGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
+ + + + A+ V + CEG L+ + + + + R + + H +
Sbjct: 73 LFMGYSTKPQLAI--VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIF---FKPGERFSEIVGSPYYMAPEVL---- 226
IHRDLK N E+ +K DFGL+ + +F ++ GS +MAPEV+
Sbjct: 131 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPF 253
K Y + D+++ G++LY L+ G P+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
V + +G G FG Y +A K ++ T + + EV +++ + +
Sbjct: 40 VGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
+ + + + A+ V + CEG L+ + + + + R + + H +
Sbjct: 96 LFMGYSTKPQLAI--VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIF---FKPGERFSEIVGSPYYMAPEVL---- 226
IHRDLK N E+ +K DFGL+ + +F ++ GS +MAPEV+
Sbjct: 154 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPF 253
K Y + D+++ G++LY L+ G P+
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
V + +G G FG Y +A K ++ T + + EV +++ + +
Sbjct: 14 VGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
+ + + + A+ V + CEG L+ + + + + R + + H +
Sbjct: 70 LFMGYSTKPQLAI--VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 127
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIF---FKPGERFSEIVGSPYYMAPEVL---- 226
IHRDLK N E+ +K DFGL+ + +F ++ GS +MAPEV+
Sbjct: 128 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPF 253
K Y + D+++ G++LY L+ G P+
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 62.0 bits (149), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVLLH-LRRMANDEHLHKAF 435
GT+D+ EFL ++ ++ ++E + +AF
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAF 89
Score = 46.2 bits (108), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AFS FDKDG+G I EL + G + D+ EVD D +G I + EF+ MM
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 28.9 bits (63), Expect = 7.6, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 389 QLAESEVQMLIEAV---DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGY 445
QL E ++ EA D +G GT+ E V+ L + + L + D DGNG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 446 IE 447
I+
Sbjct: 63 ID 64
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
V + +G G FG Y +A K ++ T + + EV +++ + +
Sbjct: 12 VGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
+ + + + A+ V + CEG L+ + + + + R + + H +
Sbjct: 68 LFMGYSTKPQLAI--VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIF---FKPGERFSEIVGSPYYMAPEVL---- 226
IHRDLK N E+ +K DFGL+ + +F ++ GS +MAPEV+
Sbjct: 126 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPF 253
K Y + D+++ G++LY L+ G P+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
V + +G G FG Y +A K ++ T + + EV +++ + +
Sbjct: 39 VGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
+ + + + A+ V + CEG L+ + + + + R + + H +
Sbjct: 95 LFMGYSTKPQLAI--VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 152
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIF---FKPGERFSEIVGSPYYMAPEVL---- 226
IHRDLK N E+ +K DFGL+ + +F ++ GS +MAPEV+
Sbjct: 153 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPF 253
K Y + D+++ G++LY L+ G P+
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
LGRG FG + D+ T A K V ++ R E + + IV L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKK---------VRLEVFRVEELVACAGLSSPRIVPLY 130
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
A + V++ MEL EGG L I G E A +E ++ H ++H D+
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 190
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERF---SEIVGSPYYMAPE-VLKRNYG 231
K +N L ++ + L DFG ++ +P G+ I G+ +MAPE V+ +
Sbjct: 191 KADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 232 PEIDIWSAGVILYILLCGVPPF 253
++DIWS+ ++ +L G P+
Sbjct: 249 AKVDIWSSCCMMLHMLNGCHPW 270
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 151 ERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKK----------ENSPLKAIDFG 200
E ++ R I V H +IHRDLKP+N L + EN + DFG
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 201 LSIFFKPGE-----RFSEIVGSPYYMAPEVL----KRNYGPEIDIWSAGVILYILLC-GV 250
L G+ + G+ + APE+L KR IDI+S G + Y +L G
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
Query: 251 PPFWAESEQGVAQAILRGLIDFKRDPWPNVSE-----SAKSLVRQMLEPDPKLRLTAKQV 305
PF + + I+RG+ F D + + A L+ QM++ DP R TA +V
Sbjct: 252 HPFGDKYSR--ESNIIRGI--FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
Query: 306 LEHP--WLQNAK 315
L HP W ++ K
Sbjct: 308 LRHPLFWPKSKK 319
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 151 ERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKK----------ENSPLKAIDFG 200
E ++ R I V H +IHRDLKP+N L + EN + DFG
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 201 LSIFFKPGE-----RFSEIVGSPYYMAPEVL----KRNYGPEIDIWSAGVILYILLC-GV 250
L G+ + G+ + APE+L KR IDI+S G + Y +L G
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
Query: 251 PPFWAESEQGVAQAILRGLIDFKRDPWPNVSE-----SAKSLVRQMLEPDPKLRLTAKQV 305
PF + + I+RG+ F D + + A L+ QM++ DP R TA +V
Sbjct: 252 HPFGDKYSR--ESNIIRGI--FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
Query: 306 LEHP--WLQNAK 315
L HP W ++ K
Sbjct: 308 LRHPLFWPKSKK 319
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 109/265 (41%), Gaps = 26/265 (9%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDT--RELLACKSISKRKLRTAVDIDDVRREV 102
P + + +Y V + G G YL +DR+ R ++ + R+ +
Sbjct: 74 PGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFL 133
Query: 103 AIMKHLPKNSSIVSLKEACE--DDNAVHLVMELCEGGELFDRIVARGHYTERA-AAAVTR 159
A + H P I + E + D ++VME GG+ R ++G A A A
Sbjct: 134 AEVVH-PSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKR--SKGQKLPVAEAIAYLL 189
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY 219
I+ + H G+++ DLKPEN + ++ LK ID G F + G+P
Sbjct: 190 EILPALSYLHSIGLVYNDLKPENIMLTEEQ----LKLIDLGAVSRIN---SFGYLYGTPG 242
Query: 220 YMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPN 279
+ APE+++ DI++ G L L +P G+ + DP
Sbjct: 243 FQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPE----------DDPVLK 292
Query: 280 VSESAKSLVRQMLEPDPKLRLTAKQ 304
+S L+R+ ++PDP+ R T +
Sbjct: 293 TYDSYGRLLRRAIDPDPRQRFTTAE 317
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 100/228 (43%), Gaps = 34/228 (14%)
Query: 43 GVPKENIEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDD 97
G E+R+L ++LG+G FG +C + +T E++A K + T + D
Sbjct: 1 GSDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 57
Query: 98 VRREVAIMKHLPKNSSIVSLKEACEDDN--AVHLVMELCEGGELFDRIVARGHYTERAAA 155
RE+ I+K L ++ +IV K C + L+ME G L D + +
Sbjct: 58 FEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 156 -AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSI-------FFK- 206
T I + ++ IHRDL N L N+ +K DFGL+ FFK
Sbjct: 117 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEFFKV 173
Query: 207 --PGERFSEIVGSP-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
PGE SP ++ APE L + + D+WS GV+LY L +
Sbjct: 174 KEPGE-------SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 127 VHLVMELCEGGELFDRIVARGHYTERAAAAVTRT---IVEVVQLCHKHGVIHRDLKPENF 183
+++ M+LC L D + R +R I E V+ H G++HRDLKP N
Sbjct: 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNI 195
Query: 184 LFANKKENSPLKAIDFGLSIFFKPGERFSEI-------------VGSPYYMAPEVLK-RN 229
F + +K DFGL E + VG+ YM+PE + N
Sbjct: 196 FFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNN 252
Query: 230 YGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNV----SESAK 285
Y ++DI+S G+IL+ LL F + E+ +R + D + +P +
Sbjct: 253 YSHKVDIFSLGLILFELLYS---FSTQMER------VRIITDVRNLKFPLLFTQKYPQEH 303
Query: 286 SLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
+V+ ML P P R A ++E+ +N
Sbjct: 304 MMVQDMLSPSPTERPEATDIIENAIFEN 331
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
V + +G G FG Y +A K ++ T + + EV +++ + +
Sbjct: 12 VGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
+ + + A+ V + CEG L+ + + + + R + + H +
Sbjct: 68 LFMGYSTAPQLAI--VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSIF---FKPGERFSEIVGSPYYMAPEVL---- 226
IHRDLK N E+ +K DFGL+ + +F ++ GS +MAPEV+
Sbjct: 126 IHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPF 253
K Y + D+++ G++LY L+ G P+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 60 GRGEFGVTYLCIDRDT----RELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIV 115
G G FGV Y +T ++L A I+ +L+ D +E+ + ++ ++V
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD-----QEIKVXAKC-QHENLV 84
Query: 116 SLKEACEDDNAVHLVMELCEGGELFDRIV---ARGHYTERAAAAVTRTIVEVVQLCHKHG 172
L D + + LV G L DR+ + + + + H++
Sbjct: 85 ELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENH 144
Query: 173 VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF------SEIVGSPYYMAPEVL 226
IHRD+K N L E K DFGL+ + E+F S IVG+ Y APE L
Sbjct: 145 HIHRDIKSANILL---DEAFTAKISDFGLA---RASEKFAQXVXXSRIVGTTAYXAPEAL 198
Query: 227 KRNYGPEIDIWSAGVILYILLCGVP 251
+ P+ DI+S GV+L ++ G+P
Sbjct: 199 RGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 358 DIKEMFKKIDSD-NDGVVSTDELKAGLRNF-----GSQLAESEVQMLIEAVDTNGKGTLD 411
+I+E +K D G +S +E K NF S+ AE + D NG GT+D
Sbjct: 26 EIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEH----VFRTFDANGDGTID 81
Query: 412 YGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRD----------ALMEDGAD 461
+ EF+ L R ++ L AFS +D DGNGYI E+ + ++M+ D
Sbjct: 82 FREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPED 141
Query: 462 DCT--DVANDIFQEVDTDKDGLISYDEFVAMMKT 493
+ T IF+++DT++DG +S +EF+ K+
Sbjct: 142 ESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 175
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVL 419
GT+D+ EFL ++
Sbjct: 61 GTIDFPEFLTMM 72
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AFS FDKDG+G I EL + G + D+ EVD D +G I + EF+ MM
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 29.6 bits (65), Expect = 4.8, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 389 QLAESEVQMLIEAV---DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGY 445
QL E ++ EA D +G GT+ E V+ L + + L + D DGNG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 446 IE 447
I+
Sbjct: 63 ID 64
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
V + +G G FG Y +A K ++ T + + EV +++ + +
Sbjct: 32 VGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
+ + + + A+ V + CEG L+ + + + + R + + H +
Sbjct: 88 LFMGYSTKPQLAI--VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 145
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSI---FFKPGERFSEIVGSPYYMAPEVL---- 226
IHRDLK N E+ +K DFGL+ + +F ++ GS +MAPEV+
Sbjct: 146 IHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPF 253
K Y + D+++ G++LY L+ G P+
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVL 419
GT+D+ EFL ++
Sbjct: 61 GTIDFPEFLTMM 72
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AFS FDKDG+G I EL + G + D+ EVD D +G I + EF+ MM
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 29.6 bits (65), Expect = 4.8, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 389 QLAESEVQMLIEAV---DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGY 445
QL E ++ EA D +G GT+ E V+ L + + L + D DGNG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 446 IE 447
I+
Sbjct: 63 ID 64
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
V + +G G FG Y +A K ++ T + + EV +++ + +
Sbjct: 40 VGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
+ + + + A+ V + CEG L+ + + + + R + + H +
Sbjct: 96 LFMGYSTKPQLAI--VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSI---FFKPGERFSEIVGSPYYMAPEVL---- 226
IHRDLK N E+ +K DFGL+ + +F ++ GS +MAPEV+
Sbjct: 154 IHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPF 253
K Y + D+++ G++LY L+ G P+
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVL 419
GT+D+ EFL ++
Sbjct: 61 GTIDFPEFLTMM 72
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AFS FDKDG+G I EL + G + D+ EVD D +G I + EF+ MM
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 29.6 bits (65), Expect = 4.9, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 389 QLAESEVQMLIEAV---DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGY 445
QL E ++ EA D +G GT+ E V+ L + + L + D DGNG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 446 IE 447
I+
Sbjct: 63 ID 64
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 408 GTLDYGEFLAVL 419
GT+D+ EFL ++
Sbjct: 62 GTIDFPEFLTMM 73
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AFS FDKDG+G I EL + G + D+ EVD D +G I + EF+ MM
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Score = 29.6 bits (65), Expect = 4.9, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 389 QLAESEVQMLIEAV---DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGY 445
QL E ++ EA D +G GT+ E V+ L + + L + D DGNG
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 446 IE 447
I+
Sbjct: 64 ID 65
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVL 419
GT+D+ EFL ++
Sbjct: 61 GTIDFPEFLTMM 72
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AFS FDKDG+G I EL + G + D+ EVD D +G I + EF+ MM
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 389 QLAESEVQMLIEAV---DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGY 445
QL E ++ EA D +G GT+ E V+ L + + L + D DGNG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 446 IE 447
I+
Sbjct: 63 ID 64
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 113/277 (40%), Gaps = 42/277 (15%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISK-----RKLRTAVDIDDVRREVAIMKHLPKNS 112
E+G G G + R T ++A K + + R +D+D V + H
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLD-----VVLKSH--DCP 84
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIVEVVQ-LCH 169
IV + V + MEL G +++ R G ER +T IV+ + L
Sbjct: 85 YIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE 142
Query: 170 KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL--- 226
KHGVIHRD+KP N L E +K DFG+S + G YMAPE +
Sbjct: 143 KHGVIHRDVKPSNILL---DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPP 199
Query: 227 ---KRNYGPEIDIWSAGVILYILLCGVPPFWA-----ESEQGVAQ---AILRGLIDFKRD 275
K +Y D+WS G+ L L G P+ E V Q +L G + F D
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGD 259
Query: 276 PWPNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
+S V+ L D + R ++LEH +++
Sbjct: 260 --------FQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
V + +G G FG Y +A K ++ T + + EV +++ + +
Sbjct: 12 VGQRIGSGSFGTVY---KGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQLCHKHGV 173
+ + + + A+ V + CEG L+ + + + + R + + H +
Sbjct: 68 LFMGYSTKPQLAI--VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 174 IHRDLKPENFLFANKKENSPLKAIDFGLSI---FFKPGERFSEIVGSPYYMAPEVL---- 226
IHRDLK N E+ +K DFGL+ + +F ++ GS +MAPEV+
Sbjct: 126 IHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 227 KRNYGPEIDIWSAGVILYILLCGVPPF 253
K Y + D+++ G++LY L+ G P+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVL 419
GT+D+ EFL ++
Sbjct: 61 GTIDFPEFLTMM 72
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AFS FDKDG+G I EL + G + D+ EVD D +G I + EF+ MM
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 29.3 bits (64), Expect = 5.9, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 389 QLAESEVQMLIEAV---DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGY 445
QL E ++ EA D +G GT+ E V+ L + + L + D DGNG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 446 IE 447
I+
Sbjct: 63 ID 64
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 48 NIEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDDVRREV 102
E+R+L R+LG+G FG +C + +T E++A K + T + D RE+
Sbjct: 9 QFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREI 65
Query: 103 AIMKHLPKNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAA-AVTR 159
I+K L ++ +IV K C + L+ME G L + + + T
Sbjct: 66 EILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS 124
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---KPGERFSEIVG 216
I + ++ IHRDL N L N+ +K DFGL+ K + E
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 217 SP-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
SP ++ APE L + + D+WS GV+LY L +
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 60.5 bits (145), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 408 GTLDYGEFLAVL 419
GT+D+ EFL ++
Sbjct: 61 GTIDFPEFLTMM 72
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 32/59 (54%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AFS FDKDG+G I EL + G + D+ EVD D DG I + EF+ MM
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 72
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 48 NIEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDDVRREV 102
E+R+L ++LG+G FG +C + +T E++A K + T + D RE+
Sbjct: 11 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREI 67
Query: 103 AIMKHLPKNSSIVSLKEACEDDN--AVHLVMELCEGGELFDRIVARGHYTERAAA-AVTR 159
I+K L ++ +IV K C + L+ME G L D + + T
Sbjct: 68 EILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 126
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---KPGERFSEIVG 216
I + ++ IHRDL N L N+ +K DFGL+ K + E
Sbjct: 127 QICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGE 183
Query: 217 SP-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
SP ++ APE L + + D+WS GV+LY L +
Sbjct: 184 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 48 NIEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDDVRREV 102
E+R+L ++LG+G FG +C + +T E++A K + T + D RE+
Sbjct: 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREI 93
Query: 103 AIMKHLPKNSSIVSLKEACEDDN--AVHLVMELCEGGELFDRIVARGHYTERAAA-AVTR 159
I+K L ++ +IV K C + L+ME G L D + + T
Sbjct: 94 EILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 152
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---KPGERFSEIVG 216
I + ++ IHRDL N L N+ +K DFGL+ K + E
Sbjct: 153 QICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGE 209
Query: 217 SP-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
SP ++ APE L + + D+WS GV+LY L +
Sbjct: 210 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 245
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 49 IEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
E+R+L ++LG+G FG +C + +T E++A K + T + D RE+
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIE 66
Query: 104 IMKHLPKNSSIVSLKEACEDDN--AVHLVMELCEGGELFDRIVARGHYTERAAA-AVTRT 160
I+K L ++ +IV K C + L+ME G L D + + T
Sbjct: 67 ILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 125
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---KPGERFSEIVGS 217
I + ++ IHRDL N L N+ +K DFGL+ K + E S
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 218 P-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
P ++ APE L + + D+WS GV+LY L +
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
+GRG FG + D+ T A K V ++ R E + + IV L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKK---------VRLEVFRVEELVACAGLSSPRIVPLY 116
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
A + V++ MEL EGG L I G E A +E ++ H ++H D+
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERF---SEIVGSPYYMAPE-VLKRNYG 231
K +N L ++ + L DFG ++ +P G+ I G+ +MAPE V+ +
Sbjct: 177 KADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 232 PEIDIWSAGVILYILLCGVPPF 253
++DIWS+ ++ +L G P+
Sbjct: 235 AKVDIWSSCCMMLHMLNGCHPW 256
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 48 NIEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDDVRREV 102
E+R+L ++LG+G FG +C + +T E++A K + T + D RE+
Sbjct: 13 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREI 69
Query: 103 AIMKHLPKNSSIVSLKEACEDDN--AVHLVMELCEGGELFDRIVARGHYTERAAA-AVTR 159
I+K L ++ +IV K C + L+ME G L D + + T
Sbjct: 70 EILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 128
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---KPGERFSEIVG 216
I + ++ IHRDL N L N+ +K DFGL+ K + E
Sbjct: 129 QICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGE 185
Query: 217 SP-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
SP ++ APE L + + D+WS GV+LY L +
Sbjct: 186 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 221
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 20/221 (9%)
Query: 43 GVPKENIEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDD 97
G E+R+L ++LG+G FG +C + +T E++A K + T + D
Sbjct: 1 GSDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 57
Query: 98 VRREVAIMKHLPKNSSIVSLKEACEDDN--AVHLVMELCEGGELFDRIVARGHYTERAAA 155
RE+ I+K L ++ +IV K C + L+ME G L D + +
Sbjct: 58 FEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 156 -AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---KPGERF 211
T I + ++ IHRDL N L N+ +K DFGL+ K +
Sbjct: 117 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKV 173
Query: 212 SEIVGSP-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
E SP ++ APE L + + D+WS GV+LY L +
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 59 LGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVSLK 118
+GRG FG + D+ T A K V ++ R E + + IV L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKK---------VRLEVFRVEELVACAGLSSPRIVPLY 132
Query: 119 EACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDL 178
A + V++ MEL EGG L I G E A +E ++ H ++H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 192
Query: 179 KPENFLFANKKENSPLKAIDFGLSIFFKP---GERF---SEIVGSPYYMAPE-VLKRNYG 231
K +N L ++ + L DFG ++ +P G+ I G+ +MAPE V+ +
Sbjct: 193 KADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 250
Query: 232 PEIDIWSAGVILYILLCGVPPF 253
++DIWS+ ++ +L G P+
Sbjct: 251 AKVDIWSSCCMMLHMLNGCHPW 272
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 411 DYGEFLAVL 419
D+ EFL ++
Sbjct: 64 DFPEFLTMM 72
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AFS FDKDG+G I EL + G + D+ EVD D +G I + EF+ MM
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 29.6 bits (65), Expect = 4.9, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 389 QLAESEVQMLIEAV---DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGY 445
QL E ++ EA D +G GT+ E V+ L + + L + D DGNG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 446 IE 447
I+
Sbjct: 63 ID 64
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 60.1 bits (144), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G
Sbjct: 1 ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 408 GTLDYGEFLAVL 419
GT+D+ EFL ++
Sbjct: 61 GTIDFPEFLNLM 72
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AFS FDKDG+G I EL + G + D+ EVD D +G I + EF+ +M
Sbjct: 14 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 49 IEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
E+R+L ++LG+G FG +C + +T E++A K + T + D RE+
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIE 81
Query: 104 IMKHLPKNSSIVSLKEACEDDN--AVHLVMELCEGGELFDRIVARGHYTERAAA-AVTRT 160
I+K L ++ +IV K C + L+ME G L D + + T
Sbjct: 82 ILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 140
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---KPGERFSEIVGS 217
I + ++ IHRDL N L N+ +K DFGL+ K + E S
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 218 P-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
P ++ APE L + + D+WS GV+LY L +
Sbjct: 198 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 48 NIEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDDVRREV 102
E+R+L ++LG+G FG +C + +T E++A K + T + D RE+
Sbjct: 10 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREI 66
Query: 103 AIMKHLPKNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAA-AVTR 159
I+K L ++ +IV K C + L+ME G L D + + T
Sbjct: 67 EILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 125
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---KPGERFSEIVG 216
I + ++ IHRDL N L N+ +K DFGL+ K + E
Sbjct: 126 QICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGE 182
Query: 217 SP-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
SP ++ APE L + + D+WS GV+LY L +
Sbjct: 183 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 218
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 48 NIEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDDVRREV 102
E+R+L ++LG+G FG +C + +T E++A K + T + D RE+
Sbjct: 12 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREI 68
Query: 103 AIMKHLPKNSSIVSLKEACEDDN--AVHLVMELCEGGELFDRIVARGHYTERAAA-AVTR 159
I+K L ++ +IV K C + L+ME G L D + + T
Sbjct: 69 EILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 127
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---KPGERFSEIVG 216
I + ++ IHRDL N L N+ +K DFGL+ K + E
Sbjct: 128 QICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGE 184
Query: 217 SP-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
SP ++ APE L + + D+WS GV+LY L +
Sbjct: 185 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 220
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 151 ERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKK----------ENSPLKAIDFG 200
E ++ R I V H +IHRDLKP+N L + EN + DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 201 LSIFFKPGE-----RFSEIVGSPYYMAPEVL--------KRNYGPEIDIWSAGVILYILL 247
L G+ + G+ + APE+L KR IDI+S G + Y +L
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 248 C-GVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSE-----SAKSLVRQMLEPDPKLRLT 301
G PF + + I+RG+ F D + + A L+ QM++ DP R T
Sbjct: 234 SKGKHPFGDKYSR--ESNIIRGI--FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPT 289
Query: 302 AKQVLEHP--WLQNAK 315
A +VL HP W ++ K
Sbjct: 290 AMKVLRHPLFWPKSKK 305
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 48 NIEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDDVRREV 102
E+R+L ++LG+G FG +C + +T E++A K + T + D RE+
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREI 60
Query: 103 AIMKHLPKNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAA-AVTR 159
I+K L ++ +IV K C + L+ME G L D + + T
Sbjct: 61 EILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 119
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---KPGERFSEIVG 216
I + ++ IHRDL N L N+ +K DFGL+ K + E
Sbjct: 120 QICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGE 176
Query: 217 SP-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
SP ++ APE L + + D+WS GV+LY L +
Sbjct: 177 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 48 NIEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDDVRREV 102
E+R+L ++LG+G FG +C + +T E++A K + T + D RE+
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREI 62
Query: 103 AIMKHLPKNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAA-AVTR 159
I+K L ++ +IV K C + L+ME G L D + + T
Sbjct: 63 EILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---KPGERFSEIVG 216
I + ++ IHRDL N L N+ +K DFGL+ K + E
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 217 SP-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
SP ++ APE L + + D+WS GV+LY L +
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 48 NIEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDDVRREV 102
E+R+L ++LG+G FG +C + +T E++A K + T + D RE+
Sbjct: 5 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREI 61
Query: 103 AIMKHLPKNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAA-AVTR 159
I+K L ++ +IV K C + L+ME G L D + + T
Sbjct: 62 EILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 120
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---KPGERFSEIVG 216
I + ++ IHRDL N L N+ +K DFGL+ K + E
Sbjct: 121 QICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGE 177
Query: 217 SP-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
SP ++ APE L + + D+WS GV+LY L +
Sbjct: 178 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 213
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 49 IEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
E+R+L ++LG+G FG +C + +T E++A K + T + D RE+
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIE 81
Query: 104 IMKHLPKNSSIVSLKEACEDDNA--VHLVMELCEGGELFDRIVARGHYTERAAA-AVTRT 160
I+K L ++ +IV K C + L+ME G L D + + T
Sbjct: 82 ILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 140
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF---KPGERFSEIVGS 217
I + ++ IHRDL N L N+ +K DFGL+ K + E S
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 218 P-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
P ++ APE L + + D+WS GV+LY L +
Sbjct: 198 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 151 ERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKK----------ENSPLKAIDFG 200
E ++ R I V H +IHRDLKP+N L + EN + DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 201 LSIFFKPGE-----RFSEIVGSPYYMAPEVL--------KRNYGPEIDIWSAGVILYILL 247
L G+ + G+ + APE+L KR IDI+S G + Y +L
Sbjct: 174 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 248 C-GVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSE-----SAKSLVRQMLEPDPKLRLT 301
G PF + + I+RG+ F D + + A L+ QM++ DP R T
Sbjct: 234 SKGKHPFGDKYSR--ESNIIRGI--FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPT 289
Query: 302 AKQVLEHP--WLQNAK 315
A +VL HP W ++ K
Sbjct: 290 AMKVLRHPLFWPKSKK 305
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 135/311 (43%), Gaps = 54/311 (17%)
Query: 32 ANKKQPITVLAGVPKENIEDRYLVD-RELGRGEFGVTYLCI----DRDTRELLACKSISK 86
++K+P T V + E R+L R+LG G FG LC +T E +A KS+
Sbjct: 4 VSEKKPAT---EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKP 60
Query: 87 RKLRTAVDIDDVRREVAIMKHLPKNSSIVSLKEACEDD--NAVHLVMELCEGGELFDRIV 144
I D+++E+ I+++L + +IV K C +D N + L+ME G L + +
Sbjct: 61 ES--GGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLP 117
Query: 145 ARGHYTERAAAAVTRTIVEVVQLCH------KHGVIHRDLKPENFLFANKKENSPLKAID 198
+ + + + VQ+C +HRDL N L ++ + +K D
Sbjct: 118 KN-----KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ---VKIGD 169
Query: 199 FGLSIFFKPGERFSEIV---GSP-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPF 253
FGL+ + + + SP ++ APE L ++ + D+WS GV L+ LL
Sbjct: 170 FGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT----- 224
Query: 254 WAESE----------------QGVAQAILRGLIDFKRDPW-PNVSESAKSLVRQMLEPDP 296
+ +S+ Q ++ L + KR P PN + L+R+ E P
Sbjct: 225 YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQP 284
Query: 297 KLRLTAKQVLE 307
R + + ++E
Sbjct: 285 SNRTSFQNLIE 295
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 59.7 bits (143), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D D DG ++T EL +R+ G E+E+Q +I VD +G GT+
Sbjct: 4 LTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTI 63
Query: 411 DYGEFLAVLLHLRR 424
D+ EFL ++ + +
Sbjct: 64 DFPEFLTMMARIMK 77
Score = 45.8 bits (107), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AFS +DKDG+G I EL + G + D+ EVD D +G I + EF+ MM
Sbjct: 14 EAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 128/295 (43%), Gaps = 51/295 (17%)
Query: 48 NIEDRYLVD-RELGRGEFGVTYLCI----DRDTRELLACKSISKRKLRTAVDIDDVRREV 102
+ E R+L R+LG G FG LC +T E +A KS+ I D+++E+
Sbjct: 5 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEI 62
Query: 103 AIMKHLPKNSSIVSLKEACEDD--NAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
I+++L + +IV K C +D N + L+ME G L + + + + +
Sbjct: 63 EILRNL-YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-----KNKINLKQQ 116
Query: 161 IVEVVQLCH------KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
+ VQ+C +HRDL N L ++ + +K DFGL+ + + +
Sbjct: 117 LKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ---VKIGDFGLTKAIETDKEXXTV 173
Query: 215 V---GSP-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESE----------- 258
SP ++ APE L ++ + D+WS GV L+ LL + +S+
Sbjct: 174 KDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-----YCDSDSSPMALFLKMI 228
Query: 259 -----QGVAQAILRGLIDFKRDPW-PNVSESAKSLVRQMLEPDPKLRLTAKQVLE 307
Q ++ L + KR P PN + L+R+ E P R + + ++E
Sbjct: 229 GPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 283
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 112/274 (40%), Gaps = 25/274 (9%)
Query: 52 RYL-VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
R+L D E+GRG F Y +D +T +A + RKL T + + E +K L +
Sbjct: 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEXLKGL-Q 83
Query: 111 NSSIVSLKEACEDD----NAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+ +IV ++ E + LV EL G L + + + R I++ +Q
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQ 143
Query: 167 LCHKHG--VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE 224
H +IHRDLK +N +K D GL+ K ++G+P + APE
Sbjct: 144 FLHTRTPPIIHRDLKCDNIFITGP--TGSVKIGDLGLATL-KRASFAKAVIGTPEFXAPE 200
Query: 225 VLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLI------DFKRDPWP 278
+ Y +D+++ G P+ SE A I R + F + P
Sbjct: 201 XYEEKYDESVDVYAFGXCXLEXATSEYPY---SECQNAAQIYRRVTSGVKPASFDKVAIP 257
Query: 279 NVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQ 312
V E + +RQ + R + K +L H + Q
Sbjct: 258 EVKEIIEGCIRQ----NKDERYSIKDLLNHAFFQ 287
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 130/331 (39%), Gaps = 78/331 (23%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAV------------DIDDVR 99
RY++ R+LG G F +L D +A K + K+ T D D+ +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 100 REVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERA-----A 154
+ H+ K + K N VH+VM GE ++ + Y R
Sbjct: 80 EDSMGANHILKLLDHFNHKGP----NGVHVVMVFEVLGENLLALIKK--YEHRGIPLIYV 133
Query: 155 AAVTRTIVEVVQLCHKH-GVIHRDLKPENFLF--ANKKEN-SPLKAIDFGLSIFFKPGER 210
+++ ++ + H+ G+IH D+KPEN L + EN +K D G + ++ E
Sbjct: 134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EH 191
Query: 211 FSEIVGSPYYMAPEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQG--------- 260
++ + + Y +PEV L +G DIWS +++ L+ G F E ++G
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG--DFLFEPDEGHSYTKDDDH 249
Query: 261 VAQAI--------------------------LRGLIDFKRDPWPNV-----------SES 283
+AQ I LR + K P +V ++
Sbjct: 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKE 309
Query: 284 AKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
+ ML+ DP+ R A ++ HPWL++
Sbjct: 310 ISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 130/331 (39%), Gaps = 78/331 (23%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAV------------DIDDVR 99
RY++ R+LG G F +L D +A K + K+ T D D+ +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 100 REVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERA-----A 154
+ H+ K + K N VH+VM GE ++ + Y R
Sbjct: 80 EDSMGANHILKLLDHFNHKGP----NGVHVVMVFEVLGENLLALIKK--YEHRGIPLIYV 133
Query: 155 AAVTRTIVEVVQLCHKH-GVIHRDLKPENFLF--ANKKEN-SPLKAIDFGLSIFFKPGER 210
+++ ++ + H+ G+IH D+KPEN L + EN +K D G + ++ E
Sbjct: 134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EH 191
Query: 211 FSEIVGSPYYMAPEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQG--------- 260
++ + + Y +PEV L +G DIWS +++ L+ G F E ++G
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG--DFLFEPDEGHSYTKDDDH 249
Query: 261 VAQAI--------------------------LRGLIDFKRDPWPNV-----------SES 283
+AQ I LR + K P +V ++
Sbjct: 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKE 309
Query: 284 AKSLVRQMLEPDPKLRLTAKQVLEHPWLQNA 314
+ ML+ DP+ R A ++ HPWL++
Sbjct: 310 ISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 311 LQNAKKAPNVPLGDVVRSRLKQFSMMNRFKRKALRVIAEFLSV-EEVEDIKEMFKKIDSD 369
L N P P+ VRS + F N KA +EF V + + D + +F+ D D
Sbjct: 52 LSNGTWTPFNPV--TVRSIISMFDREN----KAGVNFSEFTGVWKYITDWQNVFRTYDRD 105
Query: 370 NDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDE 429
N G++ +ELK L FG +L++ +LI D G+G + + +F+ + L+R+ +
Sbjct: 106 NSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD-- 163
Query: 430 HLHKAFSYFDKDGNGYIE 447
F +D D +G+I+
Sbjct: 164 ----IFRRYDTDQDGWIQ 177
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 39/163 (23%)
Query: 362 MFKKIDSDNDGVVSTDELKAGLRN-FGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLL 420
+F+++D D GV+S +EL+ L N + V+ +I D K +++ EF V
Sbjct: 31 VFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 90
Query: 421 HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDG---ADDCTDV----------- 466
++ N F +D+D +G I+ NEL+ AL G +D D+
Sbjct: 91 YITDWQN------VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRG 144
Query: 467 ----------------ANDIFQEVDTDKDGLI--SYDEFVAMM 491
DIF+ DTD+DG I SY+++++M+
Sbjct: 145 QIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 187
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 425 MANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVA-NDIFQEVDTDKDGLIS 483
+ + L F DKD +G I NEL+ AL V I D + ++
Sbjct: 22 LPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 81
Query: 484 YDEFVAMMKTGTDWRKASRHYSR 506
+ EF + K TDW+ R Y R
Sbjct: 82 FSEFTGVWKYITDWQNVFRTYDR 104
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 311 LQNAKKAPNVPLGDVVRSRLKQFSMMNRFKRKALRVIAEFLSV-EEVEDIKEMFKKIDSD 369
L N P P+ VRS + F N KA +EF V + + D + +F+ D D
Sbjct: 51 LSNGTWTPFNPV--TVRSIISMFDREN----KAGVNFSEFTGVWKYITDWQNVFRTYDRD 104
Query: 370 NDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDE 429
N G++ +ELK L FG +L++ +LI D G+G + + +F+ + L+R+ +
Sbjct: 105 NSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD-- 162
Query: 430 HLHKAFSYFDKDGNGYIE 447
F +D D +G+I+
Sbjct: 163 ----IFRRYDTDQDGWIQ 176
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 39/163 (23%)
Query: 362 MFKKIDSDNDGVVSTDELKAGLRN-FGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLL 420
+F+++D D GV+S EL+ L N + V+ +I D K +++ EF V
Sbjct: 30 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 89
Query: 421 HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDG---ADDCTDV----------- 466
++ N F +D+D +G I+ NEL+ AL G +D D+
Sbjct: 90 YITDWQN------VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRG 143
Query: 467 ----------------ANDIFQEVDTDKDGLI--SYDEFVAMM 491
DIF+ DTD+DG I SY+++++M+
Sbjct: 144 QIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 186
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 431 LHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVA-NDIFQEVDTDKDGLISYDEFVA 489
L F DKD +G I EL+ AL V I D + +++ EF
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 86
Query: 490 MMKTGTDWRKASRHYSR 506
+ K TDW+ R Y R
Sbjct: 87 VWKYITDWQNVFRTYDR 103
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 354 EEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYG 413
E+ ++I E F D +NDG + ELK + G +L + E+ LI+ D+ G+ Y
Sbjct: 20 EQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYD 79
Query: 414 EFLAVLLH--LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIF 471
+F V L+R DE + +AF FD D G I LR E G +
Sbjct: 80 DFYIVXGEKILKRDPLDE-IKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXI 138
Query: 472 QEVDTDKDGLISYDEFVAM 490
+E D D DG I+ +EF+A+
Sbjct: 139 EEFDLDGDGEINENEFIAI 157
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Query: 328 SRLKQFSMMNRFKRKALRVIAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFG 387
S K+ +M + +RK + E L+ E+ ++I+E F D+D G + ELK R G
Sbjct: 3 SNFKKANMASSSQRKRMSPKPE-LTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALG 61
Query: 388 SQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYI 446
+ + E++ I +D G G ++G+FL V E + KAF FD D G I
Sbjct: 62 FEPKKEEIKKXISEIDKEGTGKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKI 121
Query: 447 EPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMMK 492
L+ E G + + + E D D DG +S EF+ + K
Sbjct: 122 SFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFLRIXK 167
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 131/313 (41%), Gaps = 54/313 (17%)
Query: 33 NKKQPITVLAGV------PKE----NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACK 82
+ +QP+T +GV PK+ N ED ++ ++GRG FG + R L+A K
Sbjct: 87 STQQPLTKKSGVVLHRAVPKDKWVLNHED-LVLGEQIGRGNFGEVFSGRLRADNTLVAVK 145
Query: 83 SISKRKLRTAVDID---DVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL 139
S R + D +E I+K + +IV L C +++VMEL +GG+
Sbjct: 146 SC-----RETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGGDF 199
Query: 140 FDRIVARGHYTERAAAAVTRTIVEVV-------QLCHKHGVIHRDLKPENFLFANKKENS 192
+ G A +T++++V + IHRDL N L E +
Sbjct: 200 LTFLRTEG------ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKN 250
Query: 193 PLKAIDFGLS------IFFKPGERFSEIVGSPYYMAPEVLKRN-YGPEIDIWSAGVILY- 244
LK DFG+S ++ G V + APE L Y E D+WS G++L+
Sbjct: 251 VLKISDFGMSREEADGVYAASGGLRQVPVK---WTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 245 ILLCGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK-SLVRQMLEPDPKLRLTAK 303
G P+ S Q + + +G R P P + A L+ Q +P R +
Sbjct: 308 TFSLGASPYPNLSNQQTREFVEKG----GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFS 363
Query: 304 QVLEHPWLQNAKK 316
+ + LQ+ +K
Sbjct: 364 TIYQE--LQSIRK 374
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 311 LQNAKKAPNVPLGDVVRSRLKQFSMMNRFKRKALRVIAEFLSV-EEVEDIKEMFKKIDSD 369
L N P P+ VRS + F N KA +EF V + + D + +F+ D D
Sbjct: 33 LSNGTWTPFNPV--TVRSIISMFDREN----KAGVNFSEFTGVWKYITDWQNVFRTYDRD 86
Query: 370 NDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDE 429
N G++ +ELK L FG +L++ +LI D G+G + + +F+ + L+R+ +
Sbjct: 87 NSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD-- 144
Query: 430 HLHKAFSYFDKDGNGYIE 447
F +D D +G+I+
Sbjct: 145 ----IFRRYDTDQDGWIQ 158
Score = 55.8 bits (133), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 39/163 (23%)
Query: 362 MFKKIDSDNDGVVSTDELKAGLRN-FGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLL 420
+F+++D D GV+S EL+ L N + V+ +I D K +++ EF V
Sbjct: 12 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 71
Query: 421 HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDG---ADDCTDV----------- 466
++ N F +D+D +G I+ NEL+ AL G +D D+
Sbjct: 72 YITDWQN------VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRG 125
Query: 467 ----------------ANDIFQEVDTDKDGLI--SYDEFVAMM 491
DIF+ DTD+DG I SY+++++M+
Sbjct: 126 QIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 168
Score = 35.4 bits (80), Expect = 0.070, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 425 MANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVA-NDIFQEVDTDKDGLIS 483
+ + L F DKD +G I EL+ AL V I D + ++
Sbjct: 3 LPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 62
Query: 484 YDEFVAMMKTGTDWRKASRHYSR 506
+ EF + K TDW+ R Y R
Sbjct: 63 FSEFTGVWKYITDWQNVFRTYDR 85
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 49 IEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
E+R+L ++LG+G FG +C + +T E++A K + T + D RE+
Sbjct: 8 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIE 64
Query: 104 IMKHLPKNSSIVSLKEACEDDN--AVHLVMELCEGGELFDRIVARGHYTERAAA-AVTRT 160
I+K L ++ +IV K C + L+ME G L D + + T
Sbjct: 65 ILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ 123
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVG---S 217
I + ++ IHR+L N L N+ +K DFGL+ + + ++ S
Sbjct: 124 ICKGMEYLGTKRYIHRNLATRNILVENENR---VKIGDFGLTKVLPQDKEYYKVKEPGES 180
Query: 218 P-YYMAPEVLKRN-YGPEIDIWSAGVILYILLCGV 250
P ++ APE L + + D+WS GV+LY L +
Sbjct: 181 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 215
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 311 LQNAKKAPNVPLGDVVRSRLKQFSMMNRFKRKALRVIAEFLSV-EEVEDIKEMFKKIDSD 369
L N P P+ VRS + F N KA +EF V + + D + +F+ D D
Sbjct: 29 LSNGTWTPFNPV--TVRSIISMFDREN----KAGVNFSEFTGVWKYITDWQNVFRTYDRD 82
Query: 370 NDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDE 429
N G++ +ELK L FG +L++ +LI D G+G + + +F+ + L+R+ +
Sbjct: 83 NSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD-- 140
Query: 430 HLHKAFSYFDKDGNGYIE 447
F +D D +G+I+
Sbjct: 141 ----IFRRYDTDQDGWIQ 154
Score = 55.8 bits (133), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 39/163 (23%)
Query: 362 MFKKIDSDNDGVVSTDELKAGLRN-FGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLL 420
+F+++D D GV+S EL+ L N + V+ +I D K +++ EF V
Sbjct: 8 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 67
Query: 421 HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDG---ADDCTDV----------- 466
++ N F +D+D +G I+ NEL+ AL G +D D+
Sbjct: 68 YITDWQN------VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRG 121
Query: 467 ----------------ANDIFQEVDTDKDGLI--SYDEFVAMM 491
DIF+ DTD+DG I SY+++++M+
Sbjct: 122 QIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 164
Score = 35.4 bits (80), Expect = 0.089, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 431 LHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVA-NDIFQEVDTDKDGLISYDEFVA 489
L F DKD +G I EL+ AL V I D + +++ EF
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 64
Query: 490 MMKTGTDWRKASRHYSR 506
+ K TDW+ R Y R
Sbjct: 65 VWKYITDWQNVFRTYDR 81
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 311 LQNAKKAPNVPLGDVVRSRLKQFSMMNRFKRKALRVIAEFLSV-EEVEDIKEMFKKIDSD 369
L N P P+ VRS + F N KA +EF V + + D + +F+ D D
Sbjct: 30 LSNGTWTPFNPV--TVRSIISMFDREN----KAGVNFSEFTGVWKYITDWQNVFRTYDRD 83
Query: 370 NDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDE 429
N G++ +ELK L FG +L++ +LI D G+G + + +F+ + L+R+ +
Sbjct: 84 NSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD-- 141
Query: 430 HLHKAFSYFDKDGNGYIE 447
F +D D +G+I+
Sbjct: 142 ----IFRRYDTDQDGWIQ 155
Score = 55.8 bits (133), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 39/163 (23%)
Query: 362 MFKKIDSDNDGVVSTDELKAGLRN-FGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLL 420
+F+++D D GV+S EL+ L N + V+ +I D K +++ EF V
Sbjct: 9 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 68
Query: 421 HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDG---ADDCTDV----------- 466
++ N F +D+D +G I+ NEL+ AL G +D D+
Sbjct: 69 YITDWQN------VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRG 122
Query: 467 ----------------ANDIFQEVDTDKDGLI--SYDEFVAMM 491
DIF+ DTD+DG I SY+++++M+
Sbjct: 123 QIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 165
Score = 36.6 bits (83), Expect = 0.033, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 426 ANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVA-NDIFQEVDTDKDGLISY 484
A+ L F DKD +G I EL+ AL V I D + +++
Sbjct: 1 ADQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNF 60
Query: 485 DEFVAMMKTGTDWRKASRHYSR 506
EF + K TDW+ R Y R
Sbjct: 61 SEFTGVWKYITDWQNVFRTYDR 82
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ LS E++ D KE F D D DG ++ +EL +R+ E E+Q +I VD +G
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 408 GTLDYGEFLAVL 419
GT+++ EFL+++
Sbjct: 61 GTIEFDEFLSLM 72
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AF FDKDG+G I EL + + + D+ EVD D +G I +DEF+++M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 57.8 bits (138), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 348 AEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGK 407
A+ LS E++ D KE F D D DG ++ +EL +R+ E E+Q +I VD +G
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 408 GTLDYGEFLAVL 419
GT+++ EFL+++
Sbjct: 61 GTIEFDEFLSLM 72
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AF FDKDG+G I EL + + + D+ EVD D +G I +DEF+++M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ ++G G FG + + +A K + ++ A +++ REVAIMK L ++ +I
Sbjct: 41 IKEKIGAGSFGTVHRAEWHGSD--VAVKILMEQDFH-AERVNEFLREVAIMKRL-RHPNI 96
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIV----ARGHYTERAAAAVTRTIVEVVQLCHK 170
V A + +V E G L+ R++ AR ER ++ + + + H
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 171 HG--VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIV-GSPYYMAPEVLK 227
++HRDLK N L K +K DFGLS S+ G+P +MAPEVL+
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYT---VKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLR 212
Query: 228 RNYGPE-IDIWSAGVILYIL 246
E D++S GVIL+ L
Sbjct: 213 DEPSNEKSDVYSFGVILWEL 232
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDV------RR----EVAI 104
+D+ +G GEFG +C R K SK+++ A+ V RR E +I
Sbjct: 49 IDKVVGAGEFG--EVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIV 162
M + +I+ L+ V +V E E G L D + + +T + R I
Sbjct: 100 MGQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK--PGERFSEIVGS-PY 219
++ G +HRDL N L N K DFGLS + P ++ G P
Sbjct: 158 SGMKYLSDMGAVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 220 -YMAPEVLK-RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRG 268
+ +PE + R + D+WS G++L+ ++ G P+W S Q V +A+ G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 428 DEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEF 487
+E L +AF FDKD NGYI +ELR ++ G + + +E D D DG ++Y+EF
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 67
Query: 488 VAMMKT------GTDWRKASRHYS 505
V MM T G W + R +S
Sbjct: 68 VKMMMTVRGGGGGNGWSRLRRKFS 91
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E++KE FK D D +G +S EL+ + N G +L + EV+ +I+ D +G G ++Y EF+
Sbjct: 9 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 68
Query: 417 AVLLHLR 423
+++ +R
Sbjct: 69 KMMMTVR 75
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDV------RR----EVAI 104
+D+ +G GEFG +C R K SK+++ A+ V RR E +I
Sbjct: 49 IDKVVGAGEFG--EVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIV 162
M + +I+ L+ V +V E E G L D + + +T + R I
Sbjct: 100 MGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK--PGERFSEIVGS-PY 219
++ G +HRDL N L N K DFGLS + P ++ G P
Sbjct: 158 SGMKYLSDMGFVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 220 -YMAPEVLK-RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRG 268
+ +PE + R + D+WS G++L+ ++ G P+W S Q V +A+ G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 131/310 (42%), Gaps = 48/310 (15%)
Query: 33 NKKQPITVLAGV------PKE----NIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACK 82
+ +QP+T +GV PK+ N ED ++ ++GRG FG + R L+A K
Sbjct: 87 STQQPLTKKSGVVLHRAVPKDKWVLNHED-LVLGEQIGRGNFGEVFSGRLRADNTLVAVK 145
Query: 83 SISKRKLRTAVDID---DVRREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL 139
S R + D +E I+K + +IV L C +++VMEL +GG+
Sbjct: 146 SC-----RETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGGDF 199
Query: 140 FDRIVARGHYTERAAAAVTRTIVEVV-------QLCHKHGVIHRDLKPENFLFANKKENS 192
+ G A +T++++V + IHRDL N L E +
Sbjct: 200 LTFLRTEG------ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKN 250
Query: 193 PLKAIDFGLSIFFKPGERFSE--IVGSPY-YMAPEVLKRN-YGPEIDIWSAGVILY-ILL 247
LK DFG+S G + + P + APE L Y E D+WS G++L+
Sbjct: 251 VLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
Query: 248 CGVPPFWAESEQGVAQAILRGLIDFKRDPWPNVSESAK-SLVRQMLEPDPKLRLTAKQVL 306
G P+ S Q + + +G R P P + A L+ Q +P R + +
Sbjct: 311 LGASPYPNLSNQQTREFVEKG----GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIY 366
Query: 307 EHPWLQNAKK 316
+ LQ+ +K
Sbjct: 367 QE--LQSIRK 374
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDV------RR----EVAI 104
+D+ +G GEFG +C R K SK+++ A+ V RR E +I
Sbjct: 20 IDKVVGAGEFG--EVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIV 162
M + +I+ L+ V +V E E G L D + + +T + R I
Sbjct: 71 MGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK--PGERFSEIVGS-PY 219
++ G +HRDL N L N K DFGLS + P ++ G P
Sbjct: 129 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 220 -YMAPEVLK-RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRG 268
+ +PE + R + D+WS G++L+ ++ G P+W S Q V +A+ G
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDV------RR----EVAI 104
+D+ +G GEFG +C R K SK+++ A+ V RR E +I
Sbjct: 37 IDKVVGAGEFG--EVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIV 162
M + +I+ L+ V +V E E G L D + + +T + R I
Sbjct: 88 MGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 145
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK--PGERFSEIVGS-PY 219
++ G +HRDL N L N K DFGLS + P ++ G P
Sbjct: 146 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 202
Query: 220 -YMAPEVLK-RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRG 268
+ +PE + R + D+WS G++L+ ++ G P+W S Q V +A+ G
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 254
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDV------RR----EVAI 104
+D+ +G GEFG +C R K SK+++ A+ V RR E +I
Sbjct: 47 IDKVVGAGEFG--EVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 97
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIV 162
M + +I+ L+ V +V E E G L D + + +T + R I
Sbjct: 98 MGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 155
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK--PGERFSEIVGS-PY 219
++ G +HRDL N L N K DFGLS + P ++ G P
Sbjct: 156 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 220 -YMAPEVLK-RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRG 268
+ +PE + R + D+WS G++L+ ++ G P+W S Q V +A+ G
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDV------RR----EVAI 104
+D+ +G GEFG +C R K SK+++ A+ V RR E +I
Sbjct: 49 IDKVVGAGEFG--EVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIV 162
M + +I+ L+ V +V E E G L D + + +T + R I
Sbjct: 100 MGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK--PGERFSEIVGS-PY 219
++ G +HRDL N L N K DFGLS + P ++ G P
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 220 -YMAPEVLK-RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRG 268
+ +PE + R + D+WS G++L+ ++ G P+W S Q V +A+ G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDV------RR----EVAI 104
+D+ +G GEFG +C R K SK+++ A+ V RR E +I
Sbjct: 20 IDKVVGAGEFG--EVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIV 162
M + +I+ L+ V +V E E G L D + + +T + R I
Sbjct: 71 MGQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK--PGERFSEIVGS-PY 219
++ G +HRDL N L N K DFGLS + P ++ G P
Sbjct: 129 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 220 -YMAPEVLK-RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRG 268
+ +PE + R + D+WS G++L+ ++ G P+W S Q V +A+ G
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDV------RR----EVAI 104
+D+ +G GEFG +C R K SK+++ A+ V RR E +I
Sbjct: 49 IDKVVGAGEFG--EVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIV 162
M + +I+ L+ V +V E E G L D + + +T + R I
Sbjct: 100 MGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK--PGERFSEIVGS-PY 219
++ G +HRDL N L N K DFGLS + P ++ G P
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 220 -YMAPEVLK-RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRG 268
+ +PE + R + D+WS G++L+ ++ G P+W S Q V +A+ G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDV------RR----EVAI 104
+D+ +G GEFG +C R K SK+++ A+ V RR E +I
Sbjct: 49 IDKVVGAGEFG--EVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIV 162
M + +I+ L+ V +V E E G L D + + +T + R I
Sbjct: 100 MGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK--PGERFSEIVGS-PY 219
++ G +HRDL N L N K DFGLS + P ++ G P
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 220 -YMAPEVLK-RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRG 268
+ +PE + R + D+WS G++L+ ++ G P+W S Q V +A+ G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 393 SEVQMLIEAVDTNGKGTLDYGEFLAVLLH-LRRMANDEHLHKAFSYFDKDGNGYIEPNEL 451
+E+Q +I VD +G GT+D+ EFL ++ ++ ++E + +AF FDKDGNGYI EL
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
Query: 452 R 452
R
Sbjct: 61 R 61
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDV------RR----EVAI 104
+D+ +G GEFG +C R K SK+++ A+ V RR E +I
Sbjct: 49 IDKVVGAGEFG--EVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIV 162
M + +I+ L+ V +V E E G L D + + +T + R I
Sbjct: 100 MGQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK--PGERFSEIVGS-PY 219
++ G +HRDL N L N K DFGLS + P ++ G P
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 220 -YMAPEVLK-RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRG 268
+ +PE + R + D+WS G++L+ ++ G P+W S Q V +A+ G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDV------RR----EVAI 104
+D+ +G GEFG +C R K SK+++ A+ V RR E +I
Sbjct: 49 IDKVVGAGEFG--EVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIV 162
M + +I+ L+ V +V E E G L D + + +T + R I
Sbjct: 100 MGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK--PGERFSEIVGS-PY 219
++ G +HRDL N L N K DFGLS + P ++ G P
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 220 -YMAPEVLK-RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRG 268
+ +PE + R + D+WS G++L+ ++ G P+W S Q V +A+ G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 116/279 (41%), Gaps = 43/279 (15%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSS---I 114
E+GRG +G + + + +++A K ++R+ VD + ++ + + + ++S I
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVK-----RIRSTVDEKEQKQLLMDLDVVMRSSDCPYI 83
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYT------ERAAAAVTRTIVEVV-QL 167
V A + + MEL FD+ + E +T V+ + L
Sbjct: 84 VQFYGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL 141
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVL- 226
+IHRD+KP N L + +K DFG+S + G YMAPE +
Sbjct: 142 KENLKIIHRDIKPSNILL---DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERID 198
Query: 227 ----KRNYGPEIDIWSAGVILYILLCGVPPF--WAESEQGVAQAILRGLIDFKRDPWPNV 280
++ Y D+WS G+ LY L G P+ W + Q + K DP P +
Sbjct: 199 PSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV-------KGDP-PQL 250
Query: 281 SESAK--------SLVRQMLEPDPKLRLTAKQVLEHPWL 311
S S + + V L D R K++L+HP++
Sbjct: 251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 39/163 (23%)
Query: 362 MFKKIDSDNDGVVSTDELKAGLRN-FGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLL 420
+F+++D D GV+S EL+ L N + V+ +I D K +++ EF V
Sbjct: 12 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 71
Query: 421 HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDG---ADDCTDV----------- 466
++ N F +D+D +G I+ NEL+ AL G +D D+
Sbjct: 72 YITDWQN------VFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRG 125
Query: 467 ----------------ANDIFQEVDTDKDGLI--SYDEFVAMM 491
DIF+ DTD+DG I SY+++++M+
Sbjct: 126 QIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 168
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 13/138 (9%)
Query: 311 LQNAKKAPNVPLGDVVRSRLKQFSMMNRFKRKALRVIAEFLSV-EEVEDIKEMFKKIDSD 369
L N P P+ VRS + F N KA +EF V + + D + +F+ D D
Sbjct: 33 LSNGTWTPFNPV--TVRSIISMFDREN----KAGVNFSEFTGVWKYITDWQNVFRTYDRD 86
Query: 370 NDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDE 429
N G++ +ELK L G +L++ +LI D G+G + + +F+ + L+R+ +
Sbjct: 87 NSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD-- 144
Query: 430 HLHKAFSYFDKDGNGYIE 447
F +D D +G+I+
Sbjct: 145 ----IFRRYDTDQDGWIQ 158
Score = 35.4 bits (80), Expect = 0.073, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 425 MANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVA-NDIFQEVDTDKDGLIS 483
+ + L F DKD +G I EL+ AL V I D + ++
Sbjct: 3 LPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 62
Query: 484 YDEFVAMMKTGTDWRKASRHYSR 506
+ EF + K TDW+ R Y R
Sbjct: 63 FSEFTGVWKYITDWQNVFRTYDR 85
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSI 114
+ ++G G FG + + +A K + ++ A +++ REVAIMK L ++ +I
Sbjct: 41 IKEKIGAGSFGTVHRAEWHGSD--VAVKILMEQDFH-AERVNEFLREVAIMKRL-RHPNI 96
Query: 115 VSLKEACEDDNAVHLVMELCEGGELFDRIV----ARGHYTERAAAAVTRTIVEVVQLCHK 170
V A + +V E G L+ R++ AR ER ++ + + + H
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 171 HG--VIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSE--IVGSPYYMAPEVL 226
++HR+LK N L K +K DFGLS K S G+P +MAPEVL
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYT---VKVCDFGLS-RLKASTFLSSKSAAGTPEWMAPEVL 211
Query: 227 KRNYGPE-IDIWSAGVILYIL 246
+ E D++S GVIL+ L
Sbjct: 212 RDEPSNEKSDVYSFGVILWEL 232
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 15/155 (9%)
Query: 347 IAEFLSV--EEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDT 404
+A LSV ++ I E+F K+D++++G +S E+ L + G + + ++ +++A+D
Sbjct: 27 MAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDI 84
Query: 405 NGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCT 464
N +G + Y EF+A + + + L AF+ DKD +GYI +++ +L+ D D
Sbjct: 85 NDRGNITYTEFMAGCYRWKNIES-TFLKAAFNKIDKDEDGYISKSDIV-SLVHDKVLDNN 142
Query: 465 DVANDIFQEVDTDKDGL--------ISYDEFVAMM 491
D+ N F V + K G+ IS+ EF M
Sbjct: 143 DIDN-FFLSVHSIKKGIPREHIINKISFQEFKDYM 176
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 19/159 (11%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESE----VQMLIEAVDTNG 406
+E++ + + FKK+D DN G +S +E + L E + VQ +I+ DT+G
Sbjct: 15 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMS--------LPELQQNPLVQRVIDIFDTDG 66
Query: 407 KGTLDYGEFLAVLLHLRRMANDEH-LHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
G +D+ EF+ + + E L AF +D D +GYI EL L ++ D
Sbjct: 67 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 126
Query: 466 -----VANDIFQEVDTDKDGLISYDEFVAMMKTGTDWRK 499
+ + D D DG IS++EF A++ G D K
Sbjct: 127 TQLQQIVDKTIINADKDGDGRISFEEFCAVV-GGLDIHK 164
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 428 DEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEF 487
+E + +AF FDKDGNGYI ELR + G + +++ +E D D DG ++Y+EF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 488 VAMM 491
V MM
Sbjct: 61 VQMM 64
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E+I+E F+ D D +G +S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 417 AVL 419
++
Sbjct: 62 QMM 64
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 109/252 (43%), Gaps = 30/252 (11%)
Query: 42 AGVPKENIEDRYLV-DRELGRGEFGVTYL--CIDRDTRELLACKSISKRKLRTAVDIDDV 98
+G+ ++I+ R +V RELG G FG +L C + + ++ K T D
Sbjct: 5 SGIHVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDF 64
Query: 99 RREVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGEL--FDRI------------- 143
+RE ++ +L ++ IV C D + + +V E + G+L F R
Sbjct: 65 QREAELLTNL-QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 123
Query: 144 -VARGHYTERAAAAVTRTIVE-VVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGL 201
A+G + I +V L +H +HRDL N L N +K DFG+
Sbjct: 124 RQAKGELGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVG---ANLLVKIGDFGM 179
Query: 202 S--IFFKPGERFSEIVGSPY-YMAPE-VLKRNYGPEIDIWSAGVILY-ILLCGVPPFWAE 256
S ++ R P +M PE ++ R + E D+WS GVIL+ I G P++
Sbjct: 180 SRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL 239
Query: 257 SEQGVAQAILRG 268
S V + I +G
Sbjct: 240 SNTEVIECITQG 251
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 428 DEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEF 487
+E L +AF FDKD NGYI +ELR ++ G + + +E D D DG ++Y+EF
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 488 VAMMKT 493
V MM T
Sbjct: 63 VKMMMT 68
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E++KE FK D D +G +S EL+ + N G +L + EV+ +I+ D +G G ++Y EF+
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
Query: 417 AVLLHLR 423
+++ +R
Sbjct: 64 KMMMTVR 70
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 19/159 (11%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESE----VQMLIEAVDTNG 406
+E++ + + FKK+D DN G +S +E + L E + VQ +I+ DT+G
Sbjct: 14 FDADEIKRLGKRFKKLDLDNSGSLSVEEFMS--------LPELQQNPLVQRVIDIFDTDG 65
Query: 407 KGTLDYGEFLAVLLHLRRMANDEH-LHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
G +D+ EF+ + + E L AF +D D +GYI EL L ++ D
Sbjct: 66 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 125
Query: 466 -----VANDIFQEVDTDKDGLISYDEFVAMMKTGTDWRK 499
+ + D D DG IS++EF A++ G D K
Sbjct: 126 TQLQQIVDKTIINADKDGDGRISFEEFCAVV-GGLDIHK 163
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDV------RR----EVAI 104
+D+ +G GEFG +C R K SK+++ A+ V RR E +I
Sbjct: 49 IDKVVGAGEFG--EVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIV 162
M + +I+ L+ V +V E E G L D + + +T + R I
Sbjct: 100 MGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK--PGERFSEIVGS-PY 219
++ G +HRDL N L N K DFGL+ + P ++ G P
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 220 -YMAPEVLK-RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRG 268
+ +PE + R + D+WS G++L+ ++ G P+W S Q V +A+ G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 124 DNAVHLVMELCEGGELFDRIVARGHYTERAAAAV-TRTIVEVVQLCHKHGVIHRDLKPEN 182
+N V ++MELC GEL + R + + A+ + + + +HRD+ N
Sbjct: 85 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 144
Query: 183 FLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGS-PY-YMAPEVLK-RNYGPEIDIWSA 239
L ++ N +K DFGLS + + + G P +MAPE + R + D+W
Sbjct: 145 VLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 201
Query: 240 GVILY-ILLCGVPPFWAESEQGVAQAILRGLI-DFKRDPW-PNVSESAKSLVRQMLEPDP 296
GV ++ IL+ GV PF QGV + G I + +R P PN + SL+ + DP
Sbjct: 202 GVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 256
Query: 297 KLR 299
R
Sbjct: 257 SRR 259
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESE----VQMLIEAVDTNG 406
+ +E++ + + FKK+D DN G +S +E + L E + VQ +I+ DT+G
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEFMS--------LPELQQNPLVQRVIDIFDTDG 52
Query: 407 KGTLDYGEFLAVLLHLRRMANDEH-LHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD 465
G +D+ EF+ + + E L AF +D D +GYI EL L ++ D
Sbjct: 53 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 112
Query: 466 -----VANDIFQEVDTDKDGLISYDEFVAMMKTGTDWRK 499
+ + D D DG IS++EF A++ G D K
Sbjct: 113 TQLQQIVDKTIINADKDGDGRISFEEFCAVV-GGLDIHK 150
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 55.8 bits (133), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 43/66 (65%)
Query: 354 EEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYG 413
+E+E+I+E FK D D +G +S EL +R+ G E E++++I+ +D +G G +D+
Sbjct: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Query: 414 EFLAVL 419
EF+ +L
Sbjct: 93 EFVTLL 98
Score = 46.2 bits (108), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 429 EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFV 488
E + +AF FD+DGNG+I EL A+ G I Q +D D DG + ++EFV
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
Query: 489 AMM 491
++
Sbjct: 96 TLL 98
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 124 DNAVHLVMELCEGGELFDRIVARGHYTERAAAAV-TRTIVEVVQLCHKHGVIHRDLKPEN 182
+N V ++MELC GEL + R + + A+ + + + +HRD+ N
Sbjct: 87 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 146
Query: 183 FLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGS-PY-YMAPEVLK-RNYGPEIDIWSA 239
L ++ N +K DFGLS + + + G P +MAPE + R + D+W
Sbjct: 147 VLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 203
Query: 240 GVILY-ILLCGVPPFWAESEQGVAQAILRGLI-DFKRDPW-PNVSESAKSLVRQMLEPDP 296
GV ++ IL+ GV PF QGV + G I + +R P PN + SL+ + DP
Sbjct: 204 GVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 258
Query: 297 KLR 299
R
Sbjct: 259 SRR 261
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 124 DNAVHLVMELCEGGELFDRIVARGHYTERAAAAV-TRTIVEVVQLCHKHGVIHRDLKPEN 182
+N V ++MELC GEL + R + + A+ + + + +HRD+ N
Sbjct: 79 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 138
Query: 183 FLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGS-PY-YMAPEVLK-RNYGPEIDIWSA 239
L ++ N +K DFGLS + + + G P +MAPE + R + D+W
Sbjct: 139 VLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 195
Query: 240 GVILY-ILLCGVPPFWAESEQGVAQAILRGLID-FKRDPW-PNVSESAKSLVRQMLEPDP 296
GV ++ IL+ GV PF QGV + G I+ +R P PN + SL+ + DP
Sbjct: 196 GVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 250
Query: 297 KLR 299
R
Sbjct: 251 SRR 253
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 422 LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGL 481
++ ++E + +AF FDKDGNGYI ELR + G + +++ +E D D DG
Sbjct: 2 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 61
Query: 482 ISYDEFVAMM 491
++Y+EFV MM
Sbjct: 62 VNYEEFVQMM 71
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E+I+E F+ D D +G +S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 9 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 68
Query: 417 AVL 419
++
Sbjct: 69 QMM 71
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 124 DNAVHLVMELCEGGELFDRIVARGHYTERAAAAV-TRTIVEVVQLCHKHGVIHRDLKPEN 182
+N V ++MELC GEL + R + + A+ + + + +HRD+ N
Sbjct: 84 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 143
Query: 183 FLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGS-PY-YMAPEVLK-RNYGPEIDIWSA 239
L ++ N +K DFGLS + + + G P +MAPE + R + D+W
Sbjct: 144 VLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 200
Query: 240 GVILY-ILLCGVPPFWAESEQGVAQAILRGLID-FKRDPW-PNVSESAKSLVRQMLEPDP 296
GV ++ IL+ GV PF QGV + G I+ +R P PN + SL+ + DP
Sbjct: 201 GVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 255
Query: 297 KLR 299
R
Sbjct: 256 SRR 258
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 356 VEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEF 415
++ + F+++D D + DE + GL G L ++E + + D NG GTLD EF
Sbjct: 36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Query: 416 LAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELR 452
L L A + + AF+ D+ G+G + ++LR
Sbjct: 96 LRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLR 132
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 124 DNAVHLVMELCEGGELFDRIVARGHYTERAAAAV-TRTIVEVVQLCHKHGVIHRDLKPEN 182
+N V ++MELC GEL + R + + A+ + + + +HRD+ N
Sbjct: 82 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 141
Query: 183 FLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGS-PY-YMAPEVLK-RNYGPEIDIWSA 239
L ++ N +K DFGLS + + + G P +MAPE + R + D+W
Sbjct: 142 VLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 240 GVILY-ILLCGVPPFWAESEQGVAQAILRGLI-DFKRDPW-PNVSESAKSLVRQMLEPDP 296
GV ++ IL+ GV PF QGV + G I + +R P PN + SL+ + DP
Sbjct: 199 GVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 253
Query: 297 KLR 299
R
Sbjct: 254 SRR 256
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 124 DNAVHLVMELCEGGELFDRIVARGHYTERAAAAV-TRTIVEVVQLCHKHGVIHRDLKPEN 182
+N V ++MELC GEL + R + + A+ + + + +HRD+ N
Sbjct: 82 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 141
Query: 183 FLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGS-PY-YMAPEVLK-RNYGPEIDIWSA 239
L ++ N +K DFGLS + + + G P +MAPE + R + D+W
Sbjct: 142 VLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 240 GVILY-ILLCGVPPFWAESEQGVAQAILRGLI-DFKRDPW-PNVSESAKSLVRQMLEPDP 296
GV ++ IL+ GV PF QGV + G I + +R P PN + SL+ + DP
Sbjct: 199 GVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 253
Query: 297 KLR 299
R
Sbjct: 254 SRR 256
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 427 NDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDE 486
++E + +AF FDKDGNGYI ELR + G + +++ +E D D DG ++Y+E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 487 FVAMM 491
FV MM
Sbjct: 63 FVQMM 67
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E+I+E F+ D D +G +S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 417 AVL 419
++
Sbjct: 65 QMM 67
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 124 DNAVHLVMELCEGGELFDRIVARGHYTERAAAAV-TRTIVEVVQLCHKHGVIHRDLKPEN 182
+N V ++MELC GEL + R + + A+ + + + +HRD+ N
Sbjct: 110 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 169
Query: 183 FLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGS-PY-YMAPEVLK-RNYGPEIDIWSA 239
L ++ N +K DFGLS + + + G P +MAPE + R + D+W
Sbjct: 170 VLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 226
Query: 240 GVILY-ILLCGVPPFWAESEQGVAQAILRGLI-DFKRDPW-PNVSESAKSLVRQMLEPDP 296
GV ++ IL+ GV PF QGV + G I + +R P PN + SL+ + DP
Sbjct: 227 GVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 281
Query: 297 KLR 299
R
Sbjct: 282 SRR 284
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 422 LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGL 481
++ ++E + +AF FDKDGNGYI ELR + G + +++ +E D D DG
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 482 ISYDEFVAMM 491
++Y+EFV MM
Sbjct: 61 VNYEEFVQMM 70
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E+I+E F+ D D +G +S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 8 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 67
Query: 417 AVL 419
++
Sbjct: 68 QMM 70
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
+++ E F+ +D+D G +S EL A L + G + + + L+ D N G + + EF
Sbjct: 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFK 86
Query: 417 AVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDT 476
LH ++ E K D G+G ++ NE+R AL+ G + ++ D
Sbjct: 87 D--LHHFILSMREGFRKR----DSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDR 140
Query: 477 DKDGLISYDEFVAM 490
+ G + +D++V +
Sbjct: 141 QRRGSLGFDDYVEL 154
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 359 IKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAV 418
++E F+K DS DG + ++E++A L + G Q++E Q L+ D +G+L + +++ +
Sbjct: 95 MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVEL 154
Query: 419 LLHLRRMANDEHLHKAFSYFDKDGNGYI 446
+ + R+ N F+++D++ G +
Sbjct: 155 SIFVCRVRN------VFAFYDRERTGQV 176
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 423 RRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLI 482
R M +++ L + F D DG+G I EL AL G + D + G I
Sbjct: 21 RHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEI 80
Query: 483 SYDEF 487
++DEF
Sbjct: 81 TFDEF 85
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 37/161 (22%)
Query: 362 MFKKIDSDNDGVVSTDELKAGLRN-FGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLL 420
+F+++D D GV+S EL+ L N + V+ +I D K +++ EF V
Sbjct: 9 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 68
Query: 421 HLRRMANDEHLHKAFSYFDKDGNGYIEPNELRDAL------------------------- 455
++ N F +D+D +G I+ NEL+ AL
Sbjct: 69 YITDWQN------VFRTYDRDNSGMIDKNELKQALSGYRLSDQFHDILIRKFDRQGRGQI 122
Query: 456 -MEDGADDCTDVA--NDIFQEVDTDKDGLI--SYDEFVAMM 491
+D C + DIF+ DTD+DG I SY+++++M+
Sbjct: 123 AFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 163
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 15/138 (10%)
Query: 311 LQNAKKAPNVPLGDVVRSRLKQFSMMNRFKRKALRVIAEFLSV-EEVEDIKEMFKKIDSD 369
L N P P+ VRS + F N KA +EF V + + D + +F+ D D
Sbjct: 30 LSNGTWTPFNPV--TVRSIISMFDREN----KAGVNFSEFTGVWKYITDWQNVFRTYDRD 83
Query: 370 NDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDE 429
N G++ +ELK L G +L++ +LI D G+G + + +F+ + L+R+ +
Sbjct: 84 NSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD-- 139
Query: 430 HLHKAFSYFDKDGNGYIE 447
F +D D +G+I+
Sbjct: 140 ----IFRRYDTDQDGWIQ 153
Score = 36.6 bits (83), Expect = 0.035, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 426 ANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVA-NDIFQEVDTDKDGLISY 484
A+ L F DKD +G I EL+ AL V I D + +++
Sbjct: 1 ADQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNF 60
Query: 485 DEFVAMMKTGTDWRKASRHYSR 506
EF + K TDW+ R Y R
Sbjct: 61 SEFTGVWKYITDWQNVFRTYDR 82
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 16/256 (6%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
+R + R +G G+FG + I +I K T+ + + + A+
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAV-TRTIVEVVQLCH 169
+ IV L +N V ++MELC GEL + R + A+ + + +
Sbjct: 450 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 170 KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGS-PY-YMAPEVLK 227
+HRD+ N L ++ N +K DFGLS + + + G P +MAPE +
Sbjct: 509 SKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
Query: 228 -RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRGLID-FKRDPW-PNVSES 283
R + D+W GV ++ IL+ GV PF QGV + G I+ +R P PN +
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMPPNCPPT 620
Query: 284 AKSLVRQMLEPDPKLR 299
SL+ + DP R
Sbjct: 621 LYSLMTKCWAYDPSRR 636
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 32/232 (13%)
Query: 55 VDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDV------RR----EVAI 104
+D+ +G GEFG +C R K SK+++ A+ V RR E +I
Sbjct: 49 IDKVVGAGEFG--EVCSGR-------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 105 MKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTIV 162
M + +I+ L+ V +V E E G L D + + +T + R I
Sbjct: 100 MGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 163 EVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFK--PGERFSEIVGS-PY 219
++ G +HRDL N L N K DFGL + P ++ G P
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 220 -YMAPEVLK-RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRG 268
+ +PE + R + D+WS G++L+ ++ G P+W S Q V +A+ G
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 427 NDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDE 486
++E + +AF FDKDGNGYI ELR + G + +++ +E D D DG ++Y+E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 487 FVAMM 491
FV MM
Sbjct: 63 FVQMM 67
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E+I+E F+ D D +G +S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 417 AVL 419
++
Sbjct: 65 QMM 67
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 19/156 (12%)
Query: 354 EEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESE----VQMLIEAVDTNGKGT 409
+E++ + + FKK+D DN G +S +E + L E + VQ +I+ DT+G G
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMS--------LPELQQNPLVQRVIDIFDTDGNGE 54
Query: 410 LDYGEFLAVLLHLRRMANDEH-LHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTD--- 465
+D+ EF+ + + E L AF +D D +GYI EL L ++ D
Sbjct: 55 VDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQL 114
Query: 466 --VANDIFQEVDTDKDGLISYDEFVAMMKTGTDWRK 499
+ + D D DG IS++EF A++ G D K
Sbjct: 115 QQIVDKTIINADKDGDGRISFEEFCAVV-GGLDIHK 149
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 427 NDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDE 486
++E + +AF FDKDGNGYI ELR + G + +++ +E D D DG ++Y+E
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 487 FVAMM 491
FV MM
Sbjct: 64 FVQMM 68
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E+I+E F+ D D +G +S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 65
Query: 417 AVL 419
++
Sbjct: 66 QMM 68
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 328 SRLKQFSMMNRFKRKALRVIAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFG 387
S K+ +M + +RK + E L+ E+ ++I+E F D+D G + ELK +R G
Sbjct: 3 SNFKKANMASSSQRKRMSPKPE-LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALG 61
Query: 388 SQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLH 421
+ + E++ +I +D G G +++G+FL V+
Sbjct: 62 FEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQ 95
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 429 EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFV 488
+ + +AF FD DG G I+ EL+ A+ G + + + E+D + G +++ +F+
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 90
Query: 489 AMM 491
+M
Sbjct: 91 TVM 93
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 389 QLAESEVQMLIEAVD---TNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGY 445
+L E + Q + EA D +G GT+D E + L E + K S DK+G G
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGK 83
Query: 446 I 446
+
Sbjct: 84 M 84
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 122/329 (37%), Gaps = 74/329 (22%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDT-RELLACKSISK-RKLRTAVDIDDVRREVAIMK 106
+++RY + LG G FG C+D + +A K I K R A R E+ ++K
Sbjct: 49 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA-----RLEINVLK 103
Query: 107 HLPKNSS-----IVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH--YTERAAAAVTR 159
+ + V + + + + EL G F+ + Y +
Sbjct: 104 KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAY 162
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKK----------------ENSPLKAIDFGLSI 203
+ ++ H++ + H DLKPEN LF N + +N+ ++ DFG +
Sbjct: 163 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 222
Query: 204 FFKPGERFSEIVGSPYYMAPEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESE---- 258
F E + IV + +Y PEV L+ + D+WS G IL+ G F
Sbjct: 223 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
Query: 259 ---QGVAQAILRGLIDFKRDP---------WPN-------VSESAK-------------- 285
+ + I +I R W V E+ K
Sbjct: 281 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 340
Query: 286 ---SLVRQMLEPDPKLRLTAKQVLEHPWL 311
L+R+MLE DP R+T + L HP+
Sbjct: 341 QLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 34/219 (15%)
Query: 49 IEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDID-DVRREV 102
E+R+L +LG+G FG LC + +T L+A K + + D D +RE+
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ----HSGPDQQRDFQREI 62
Query: 103 AIMKHLPKNSSIVSLKEAC--EDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
I+K L + IV + ++ LVME G L D + RA +R
Sbjct: 63 QILKAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-----QRHRARLDASRL 116
Query: 161 IVEVVQLCH------KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
++ Q+C +HRDL N L ++ +K DFGL+ P ++ +
Sbjct: 117 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAH---VKIADFGLAKLL-PLDKDYYV 172
Query: 215 VGSP-----YYMAPEVLKRN-YGPEIDIWSAGVILYILL 247
V P ++ APE L N + + D+WS GV+LY L
Sbjct: 173 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 120/275 (43%), Gaps = 39/275 (14%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR------EVAIMKHLPK 110
RELG+G FG+ Y + + R+++ ++ ++ ++T + +R E ++MK
Sbjct: 22 RELGQGSFGMVY---EGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 78
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC-- 168
+ +V L +VMEL G+L + + E T+ E++Q+
Sbjct: 79 H-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 169 --------HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-------IFFKPGERFSE 213
+ +HRDL N + A+ + +K DFG++ + K G+
Sbjct: 138 IADGMAYLNAKKFVHRDLAARNCMVAH---DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 214 IVGSPYYMAPEVLKRN-YGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRGLID 271
+ +MAPE LK + D+WS GV+L+ I P+ S + V + ++ G
Sbjct: 195 V----RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 250
Query: 272 FKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVL 306
+ D N E L+R + +PK+R T +++
Sbjct: 251 DQPD---NCPERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 372 GVVSTDELKA--GLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDE 429
G+ + E K GL+ +Q A + + DTN G +D+ EF+A + + + ++
Sbjct: 35 GLQTLHEFKTLLGLQGL-NQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQ 93
Query: 430 HLHKAFSYFDKDGNGYIEPNELRDALME----DGADDCT--DVANDIFQEVDTDKDGLIS 483
L F +D DGNG I+ NEL D M +G + + N +F ++D + DG ++
Sbjct: 94 KLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELT 153
Query: 484 YDEFVAMMKTGTD 496
+EF+ M D
Sbjct: 154 LEEFINGMAKDQD 166
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 34/219 (15%)
Query: 49 IEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDID-DVRREV 102
E+R+L +LG+G FG LC + +T L+A K + + D D +RE+
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ----HSGPDQQRDFQREI 75
Query: 103 AIMKHLPKNSSIVSLKEAC--EDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
I+K L + IV + ++ LVME G L D + RA +R
Sbjct: 76 QILKAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-----QRHRARLDASRL 129
Query: 161 IVEVVQLCH------KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
++ Q+C +HRDL N L ++ +K DFGL+ P ++ +
Sbjct: 130 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAH---VKIADFGLAKLL-PLDKDYYV 185
Query: 215 VGSP-----YYMAPEVLKRN-YGPEIDIWSAGVILYILL 247
V P ++ APE L N + + D+WS GV+LY L
Sbjct: 186 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 350 FLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGT 409
FLS E + + K F D+D G +ST EL +R G + E+ +IE VD +G GT
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 410 LDYGEFLAVLLHLRRMAND 428
+D+ EFL ++ +R+M D
Sbjct: 73 IDFEEFLVMM--VRQMKED 89
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 430 HLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVA 489
AF FD DG G I EL + G + + + I +EVD D G I ++EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 490 MM 491
MM
Sbjct: 81 MM 82
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 122/329 (37%), Gaps = 74/329 (22%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDT-RELLACKSISK-RKLRTAVDIDDVRREVAIMK 106
+++RY + LG G FG C+D + +A K I K R A R E+ ++K
Sbjct: 26 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA-----RLEINVLK 80
Query: 107 HLPKNSS-----IVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH--YTERAAAAVTR 159
+ + V + + + + EL G F+ + Y +
Sbjct: 81 KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAY 139
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKK----------------ENSPLKAIDFGLSI 203
+ ++ H++ + H DLKPEN LF N + +N+ ++ DFG +
Sbjct: 140 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 199
Query: 204 FFKPGERFSEIVGSPYYMAPEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESE---- 258
F E + IV + +Y PEV L+ + D+WS G IL+ G F
Sbjct: 200 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
Query: 259 ---QGVAQAILRGLIDFKRDP---------WPN-------VSESAK-------------- 285
+ + I +I R W V E+ K
Sbjct: 258 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 317
Query: 286 ---SLVRQMLEPDPKLRLTAKQVLEHPWL 311
L+R+MLE DP R+T + L HP+
Sbjct: 318 QLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 37/274 (13%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR------EVAIMKHLPK 110
RELG+G FG+ Y + + R+++ ++ ++ ++T + +R E ++MK
Sbjct: 23 RELGQGSFGMVY---EGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC-- 168
+ +V L +VMEL G+L + + E T+ E++Q+
Sbjct: 80 H-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 169 --------HKHGVIHRDLKPENFLFANKKENSPLKAIDFGL------SIFFKPGERFSEI 214
+ +HRDL N + A+ + +K DFG+ + +++ G +
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAH---DFTVKIGDFGMTRDIYETAYYRKGGKGLLP 195
Query: 215 VGSPYYMAPEVLKRN-YGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRGLIDF 272
V +MAPE LK + D+WS GV+L+ I P+ S + V + ++ G
Sbjct: 196 V---RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD 252
Query: 273 KRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVL 306
+ D N E L+R + +PK+R T +++
Sbjct: 253 QPD---NCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 422 LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGL 481
++ ++E L +AF FD+DGNG I ELR + G D +++ +E D D DG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 482 ISYDEFVAMM 491
I+Y+EFV MM
Sbjct: 61 INYEEFVRMM 70
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E++ E FK D D +G++S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 8 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 67
Query: 417 AVLL 420
+++
Sbjct: 68 RMMV 71
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 122/329 (37%), Gaps = 74/329 (22%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDT-RELLACKSISK-RKLRTAVDIDDVRREVAIMK 106
+++RY + LG G FG C+D + +A K I K R A R E+ ++K
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA-----RLEINVLK 71
Query: 107 HLPKNSS-----IVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH--YTERAAAAVTR 159
+ + V + + + + EL G F+ + Y +
Sbjct: 72 KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAY 130
Query: 160 TIVEVVQLCHKHGVIHRDLKPENFLFANKK----------------ENSPLKAIDFGLSI 203
+ ++ H++ + H DLKPEN LF N + +N+ ++ DFG +
Sbjct: 131 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 190
Query: 204 FFKPGERFSEIVGSPYYMAPEV-LKRNYGPEIDIWSAGVILYILLCGVPPFWAESE---- 258
F E + IV + +Y PEV L+ + D+WS G IL+ G F
Sbjct: 191 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
Query: 259 ---QGVAQAILRGLIDFKRDP---------WPN-------VSESAKS------------- 286
+ + I +I R W V E+ K
Sbjct: 249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 308
Query: 287 ----LVRQMLEPDPKLRLTAKQVLEHPWL 311
L+R+MLE DP R+T + L HP+
Sbjct: 309 QLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 34/219 (15%)
Query: 49 IEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDID-DVRREV 102
E+R+L +LG+G FG LC + +T L+A K + + D D +RE+
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ----HSGPDQQRDFQREI 63
Query: 103 AIMKHLPKNSSIVSLKEAC--EDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
I+K L + IV + ++ LVME G L D + RA +R
Sbjct: 64 QILKAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-----QRHRARLDASRL 117
Query: 161 IVEVVQLCH------KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
++ Q+C +HRDL N L ++ +K DFGL+ P ++ +
Sbjct: 118 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAH---VKIADFGLAKLL-PLDKDYYV 173
Query: 215 VGSP-----YYMAPEVLKRN-YGPEIDIWSAGVILYILL 247
V P ++ APE L N + + D+WS GV+LY L
Sbjct: 174 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 120/275 (43%), Gaps = 39/275 (14%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR------EVAIMKHLPK 110
RELG+G FG+ Y + + R+++ ++ ++ ++T + +R E ++MK
Sbjct: 23 RELGQGSFGMVY---EGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC-- 168
+ +V L +VMEL G+L + + E T+ E++Q+
Sbjct: 80 H-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 169 --------HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-------IFFKPGERFSE 213
+ +HRDL N + A+ + +K DFG++ + K G+
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAH---DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 214 IVGSPYYMAPEVLKRN-YGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRGLID 271
+ +MAPE LK + D+WS GV+L+ I P+ S + V + ++ G
Sbjct: 196 V----RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 272 FKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVL 306
+ D N E L+R + +PK+R T +++
Sbjct: 252 DQPD---NCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR---REVAIMKH 107
DR + + LGRG FG + C++++ + L+ + R E+ I+ H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 108 LPKNSSIVSLKEAC-EDDNAVHLVMELCEGGELFDRIVA-RGHYTERAAA---------- 155
+ + ++V+L AC + + +++E C+ G L + + R + A
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 156 -----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPG 208
+ + + ++ IHRDL N L + E + +K DFGL+ I+ P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPD 203
Query: 209 ERFSEIVGSPY-YMAPE-VLKRNYGPEIDIWSAGVILY-ILLCGVPPF 253
P +MAPE + R Y + D+WS GV+L+ I G P+
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E+ ++I+E F D+D G + ELK +R G + + E++ +I +D +G GT+
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 411 DYGEFLAVL 419
D+ EFL ++
Sbjct: 84 DFEEFLTMM 92
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 429 EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFV 488
+ + +AF FD DG+G I+ EL+ A+ G + + + E+D D G I ++EF+
Sbjct: 30 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 89
Query: 489 AMM 491
MM
Sbjct: 90 TMM 92
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 390 LAESEVQMLIEAVD---TNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYI 446
L E + Q + EA D T+G GT+D E + L E + K S DKDG+G I
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 447 EPNEL 451
+ E
Sbjct: 84 DFEEF 88
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 28/228 (12%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR---REVAIMKH 107
DR + + LGRG FG + C++++ + L+ + R E+ I+ H
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 108 LPKNSSIVSLKEAC-EDDNAVHLVMELCEGGELFDRIVARGH----YTERAAAAVTRTIV 162
+ + ++V+L AC + + +++E C+ G L + ++ + Y E +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 163 EVVQLCHKHGV------------IHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPG 208
+C+ V IHRDL N L + E + +K DFGL+ I+ P
Sbjct: 149 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPD 205
Query: 209 ERFSEIVGSPY-YMAPE-VLKRNYGPEIDIWSAGVILY-ILLCGVPPF 253
P +MAPE + R Y + D+WS GV+L+ I G P+
Sbjct: 206 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 253
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR---REVAIMKH 107
DR + + LGRG FG + C++++ + L+ + R E+ I+ H
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 108 LPKNSSIVSLKEAC-EDDNAVHLVMELCEGGELFDRIVA-RGHYTERAAA---------- 155
+ + ++V+L AC + + +++E C+ G L + + R + A
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 156 -----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPG 208
+ + + ++ IHRDL N L + E + +K DFGL+ I+ P
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPD 240
Query: 209 ERFSEIVGSPY-YMAPE-VLKRNYGPEIDIWSAGVILY-ILLCGVPPF 253
P +MAPE + R Y + D+WS GV+L+ I G P+
Sbjct: 241 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 53.1 bits (126), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 350 FLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGT 409
FLS E + + K F D+D G +ST L +R G + E+ +IE VD +G GT
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 410 LDYGEFLAVLLHLRRMAND 428
+D+ EFL ++ +R+M D
Sbjct: 73 IDFEEFLVMM--VRQMKED 89
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 434 AFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
AF FD DG G I L + G + + + I +EVD D G I ++EF+ MM
Sbjct: 25 AFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 14/209 (6%)
Query: 45 PKENIEDRYLV---DRELGRGEFG-VTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR 100
PKE DR L+ D+ELG G FG V I K + D++
Sbjct: 360 PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 419
Query: 101 EVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
E +M+ L N IV + CE ++ + LVME+ E G L + H ++ +
Sbjct: 420 EANVMQQL-DNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 477
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF--SEIVGS- 217
+ ++ + +HRDL N L + K DFGLS + E + ++ G
Sbjct: 478 VSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKW 534
Query: 218 PY-YMAPEVLK-RNYGPEIDIWSAGVILY 244
P + APE + + + D+WS GV+++
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMW 563
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 33/179 (18%)
Query: 165 VQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE 224
+ + H+ GV+HRDL P N L A +N+ + DF L+ + V +Y APE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADANKTHYVTHRWYRAPE 203
Query: 225 VLK--RNYGPEIDIWSAGVIL---------------------YILLCGVPPF---WAESE 258
++ + + +D+WSAG ++ + + G P S
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSS 263
Query: 259 QGVAQAILRGLIDFKRDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
+ L + W P A L+ +MLE +P+ R++ +Q L HP+ ++
Sbjct: 264 PSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFES 322
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 49 IEDRYL-VDRELGRGEFGVTYLC----IDRDTRELLACKSISKRKLRTAVDID-DVRREV 102
E+R+L +LG+G FG LC + +T L+A K + + D D +RE+
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ----HSGPDQQRDFQREI 59
Query: 103 AIMKHLPKNSSIVSLKEACEDDN--AVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
I+K L + IV + + LVME G L D + RA +R
Sbjct: 60 QILKAL-HSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL-----QRHRARLDASRL 113
Query: 161 IVEVVQLCH------KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEI 214
++ Q+C +HRDL N L ++ +K DFGL+ P ++ +
Sbjct: 114 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAH---VKIADFGLAKLL-PLDKDXXV 169
Query: 215 VGSP-----YYMAPEVLKRN-YGPEIDIWSAGVILYILL 247
V P ++ APE L N + + D+WS GV+LY L
Sbjct: 170 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 33/179 (18%)
Query: 165 VQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPE 224
+ + H+ GV+HRDL P N L A +N+ + DF L+ + V +Y APE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADANKTHYVTHRWYRAPE 203
Query: 225 VLK--RNYGPEIDIWSAGVIL---------------------YILLCGVPPF---WAESE 258
++ + + +D+WSAG ++ + + G P S
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSS 263
Query: 259 QGVAQAILRGLIDFKRDPW----PNVSESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQN 313
+ L + W P A L+ +MLE +P+ R++ +Q L HP+ ++
Sbjct: 264 PSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFES 322
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 28/228 (12%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR---REVAIMKH 107
DR + + LGRG FG + C++++ + L+ + R E+ I+ H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 108 LPKNSSIVSLKEAC-EDDNAVHLVMELCEGGELFDRIVA-RGHYTERAAA---------- 155
+ + ++V+L AC + + +++E C+ G L + + R + A
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 156 -----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPG 208
+ + + ++ IHRDL N L + E + +K DFGL+ I+ P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPD 203
Query: 209 ERFSEIVGSPY-YMAPE-VLKRNYGPEIDIWSAGVILY-ILLCGVPPF 253
P +MAPE + R Y + D+WS GV+L+ I G P+
Sbjct: 204 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 14/209 (6%)
Query: 45 PKENIEDRYLV---DRELGRGEFG-VTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR 100
PKE DR L+ D+ELG G FG V I K + D++
Sbjct: 361 PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 420
Query: 101 EVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
E +M+ L N IV + CE ++ + LVME+ E G L + H ++ +
Sbjct: 421 EANVMQQL-DNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 478
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF--SEIVGS- 217
+ ++ + +HRDL N L + K DFGLS + E + ++ G
Sbjct: 479 VSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKW 535
Query: 218 PY-YMAPEVLK-RNYGPEIDIWSAGVILY 244
P + APE + + + D+WS GV+++
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMW 564
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 41/63 (65%)
Query: 358 DIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLA 417
++KE F+ +D + GV+ D L+ L++ G +L E E++ +I DT+G GT+DY EF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 418 VLL 420
+++
Sbjct: 68 LMM 70
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 427 NDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDE 486
++ L +AF DK+ G I+ + LR L G + D ++ E DTD G + Y+E
Sbjct: 5 DERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEE 64
Query: 487 FVAMM 491
F +M
Sbjct: 65 FKCLM 69
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 28/228 (12%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR---REVAIMKH 107
DR + + LGRG FG + C++++ + L+ + R E+ I+ H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 108 LPKNSSIVSLKEAC-EDDNAVHLVMELCEGGELFDRIVA-RGHYTERAAA---------- 155
+ + ++V+L AC + + ++ E C+ G L + + R + A
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 156 -----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPG 208
+ + + ++ IHRDL N L + E + +K DFGL+ I+ P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPD 194
Query: 209 ERFSEIVGSPY-YMAPE-VLKRNYGPEIDIWSAGVILY-ILLCGVPPF 253
P +MAPE + R Y + D+WS GV+L+ I G P+
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 14/209 (6%)
Query: 45 PKENIEDRYLV---DRELGRGEFG-VTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR 100
PKE DR L+ D+ELG G FG V I K + D++
Sbjct: 16 PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 75
Query: 101 EVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
E +M+ L N IV + CE ++ + LVME+ E G L + H ++ +
Sbjct: 76 EANVMQQL-DNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 133
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF--SEIVGS- 217
+ ++ + +HRDL N L + K DFGLS + E + ++ G
Sbjct: 134 VSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKW 190
Query: 218 PY-YMAPEVLK-RNYGPEIDIWSAGVILY 244
P + APE + + + D+WS GV+++
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMW 219
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 127/335 (37%), Gaps = 78/335 (23%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSIS--KRKLRTAVDIDDVRREVAIMK 106
+ + +LV R++G G FG LC D ++ A K + K+ R+A D+ +++
Sbjct: 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDD 92
Query: 107 HLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
N K D H+ + G I+ R +Y + +E+++
Sbjct: 93 INNNNIVKYHGKFMYYD----HMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILK 148
Query: 167 ---LCHKHGVIHRDLKPENFLFAN----------------------KKENSPLKAIDFGL 201
K + H DLKPEN L + + +++ +K IDFG
Sbjct: 149 ALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGC 208
Query: 202 SIFFKPGERFSEIVGSPYYMAPEVLKRNYGPEI--DIWSAGVILYILLCGVPPFWAESE- 258
+ F + I+ + Y APEV+ N G ++ D+WS G +L L G F
Sbjct: 209 ATF--KSDYHGSIINTRQYRAPEVI-LNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHM 265
Query: 259 ------QGVAQAILRGLI--------------DFKRDPWPNVSESAKSL----------- 287
+ + Q I + ++ D + WP + S S+
Sbjct: 266 EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYK 325
Query: 288 ----------VRQMLEPDPKLRLTAKQVLEHPWLQ 312
+ +L+ DP LR + ++L+H +L+
Sbjct: 326 IIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 52.8 bits (125), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
+D++ +FK+ D++ DG +S EL LR GS A+ EVQ ++ +DT+G G +D+ EF+
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFI 61
Query: 417 A 417
+
Sbjct: 62 S 62
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 425 MANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISY 484
MA+D + + F FD +G+G I +EL DAL G+ +V + E+DTD DG I +
Sbjct: 1 MADD--MERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQR-MMAEIDTDGDGFIDF 57
Query: 485 DEFVA 489
+EF++
Sbjct: 58 NEFIS 62
Score = 32.3 bits (72), Expect = 0.59, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 394 EVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNEL 451
+++ + + DTNG G + E L L + DE + + + D DG+G+I+ NE
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEF 60
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY + R++G G FG YL D E +A K + + I E I K +
Sbjct: 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-----ESKIYKMM 61
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQL 167
I +++ + + +VMEL G L D ++ + + ++ ++
Sbjct: 62 QGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEY 120
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS 202
H IHRD+KP+NFL K+ + + IDFGL+
Sbjct: 121 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 23/126 (18%)
Query: 352 SVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNF---------GSQLAESEVQMLIEAV 402
++ E+ + ++K D+D+ G + T+ELK L++ ++LAE ++++
Sbjct: 98 QLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEY-TDLMLKLF 156
Query: 403 DTNGKGTLDYGEFLAVLLHLR----------RMANDEHLHKAFSYFDKDGNGYIEPNELR 452
D+N G L+ E +A LL ++ +M E +KAF +D+DGNGYI+ NEL
Sbjct: 157 DSNNDGKLELTE-MARLLPVQENFLLKFQGIKMCGKE-FNKAFELYDQDGNGYIDENEL- 213
Query: 453 DALMED 458
DAL++D
Sbjct: 214 DALLKD 219
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 113/275 (41%), Gaps = 39/275 (14%)
Query: 58 ELGRGEFGVTYLCIDRDTRELLACKSI-----SKRKLRTAVDIDDVRREVAIMKHLPKNS 112
ELGRG +GV + ++ A K I S+ + R D+D R V
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDC-------P 93
Query: 113 SIVSLKEACEDDNAVHLVMELCEGG--ELFDRIVARGH-YTERAAAAVTRTIVEVVQLCH 169
V+ A + V + EL + + + +++ +G E + +IV+ ++ H
Sbjct: 94 FTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 153
Query: 170 -KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF-----KPGERFSEIVGSPYYMAP 223
K VIHRD+KP N L + +K DFG+S + K + + +P + P
Sbjct: 154 SKLSVIHRDVKPSNVLINALGQ---VKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINP 210
Query: 224 EVLKRNYGPEIDIWSAGVILYILLCGVPPF--WAESEQGVAQAILRGLIDFKRDPWPNVS 281
E+ ++ Y + DIWS G+ L P+ W Q + Q + +P P +
Sbjct: 211 ELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVV--------EEPSPQLP 262
Query: 282 ESAKS-----LVRQMLEPDPKLRLTAKQVLEHPWL 311
S Q L+ + K R T ++ +HP+
Sbjct: 263 ADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 52.8 bits (125), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 362 MFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFLAVLLH 421
+FK++D++ DG VS +E+KA + + E +Q++ +A+D +G G +D EF
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
Query: 422 LRRM-ANDEH--LHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDK 478
++ +DE L + D DG+G + E+ + G + D + D +
Sbjct: 65 VKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQ----IMKADANG 120
Query: 479 DGLISYDEFVA 489
DG I+ +EF+A
Sbjct: 121 DGYITLEEFLA 131
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 396 QMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNELRD-- 453
+ L + +D NG G++ Y E A + R + N++ L F D DGNG I+ E
Sbjct: 3 EALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFA 62
Query: 454 -ALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMMK 492
A+ E D +++ +D D DG ++ +E K
Sbjct: 63 AAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFK 102
Score = 36.2 bits (82), Expect = 0.050, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 336 MNRFKRKALRVIAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEV 395
+ F + A V + LS E+V +K ++K +D+D DG ++ +E+ + FG E V
Sbjct: 55 LAEFTKFAAAVKEQDLSDEKV-GLKILYKLMDADGDGKLTKEEVTTFFKKFGY---EKVV 110
Query: 396 QMLIEAVDTNGKGTLDYGEFLA 417
+++A D NG G + EFLA
Sbjct: 111 DQIMKA-DANGDGYITLEEFLA 131
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 28/228 (12%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR---REVAIMKH 107
DR + + LGRG FG + C++++ + L+ + R E+ I+ H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 108 LPKNSSIVSLKEAC-EDDNAVHLVMELCEGGELFDRIVA-RGHYTERAAA---------- 155
+ + ++V+L AC + + ++ E C+ G L + + R + A
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 156 -----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPG 208
+ + + ++ IHRDL N L + E + +K DFGL+ I+ P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPD 194
Query: 209 ERFSEIVGSPY-YMAPE-VLKRNYGPEIDIWSAGVILY-ILLCGVPPF 253
P +MAPE + R Y + D+WS GV+L+ I G P+
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 14/209 (6%)
Query: 45 PKENIEDRYLV---DRELGRGEFG-VTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR 100
PKE DR L+ D+ELG G FG V I K + D++
Sbjct: 2 PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 61
Query: 101 EVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
E +M+ L N IV + CE ++ + LVME+ E G L + H ++ +
Sbjct: 62 EANVMQQL-DNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 119
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF--SEIVGS- 217
+ ++ + +HRDL N L + K DFGLS + E + ++ G
Sbjct: 120 VSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKW 176
Query: 218 PY-YMAPEVLK-RNYGPEIDIWSAGVILY 244
P + APE + + + D+WS GV+++
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMW 205
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 14/209 (6%)
Query: 45 PKENIEDRYLV---DRELGRGEFG-VTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR 100
PKE DR L+ D+ELG G FG V I K + D++
Sbjct: 8 PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 67
Query: 101 EVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
E +M+ L N IV + CE ++ + LVME+ E G L + H ++ +
Sbjct: 68 EANVMQQL-DNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 125
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF--SEIVGS- 217
+ ++ + +HRDL N L + K DFGLS + E + ++ G
Sbjct: 126 VSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKW 182
Query: 218 PY-YMAPEVLK-RNYGPEIDIWSAGVILY 244
P + APE + + + D+WS GV+++
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMW 211
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 14/209 (6%)
Query: 45 PKENIEDRYLV---DRELGRGEFG-VTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR 100
PKE DR L+ D+ELG G FG V I K + D++
Sbjct: 18 PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 77
Query: 101 EVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
E +M+ L N IV + CE ++ + LVME+ E G L + H ++ +
Sbjct: 78 EANVMQQL-DNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 135
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF--SEIVGS- 217
+ ++ + +HRDL N L + K DFGLS + E + ++ G
Sbjct: 136 VSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKW 192
Query: 218 PY-YMAPEVLK-RNYGPEIDIWSAGVILY 244
P + APE + + + D+WS GV+++
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMW 221
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 14/209 (6%)
Query: 45 PKENIEDRYLV---DRELGRGEFG-VTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR 100
PKE DR L+ D+ELG G FG V I K + D++
Sbjct: 18 PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 77
Query: 101 EVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
E +M+ L N IV + CE ++ + LVME+ E G L + H ++ +
Sbjct: 78 EANVMQQL-DNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 135
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERF--SEIVGS- 217
+ ++ + +HRDL N L + K DFGLS + E + ++ G
Sbjct: 136 VSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKW 192
Query: 218 PY-YMAPEVLK-RNYGPEIDIWSAGVILY 244
P + APE + + + D+WS GV+++
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMW 221
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 124 DNAVHLVMELCEGGELFDRIVARGHYTERAAAAV-TRTIVEVVQLCHKHGVIHRDLKPEN 182
+N V ++MELC GEL + R + A+ + + + +HRD+ N
Sbjct: 82 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 141
Query: 183 FLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGS-PY-YMAPEVLK-RNYGPEIDIWSA 239
L ++ N +K DFGLS + + G P +MAPE + R + D+W
Sbjct: 142 VLVSS---NDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 240 GVILY-ILLCGVPPFWAESEQGVAQAILRGLID-FKRDPW-PNVSESAKSLVRQMLEPDP 296
GV ++ IL+ GV PF QGV + G I+ +R P PN + SL+ + DP
Sbjct: 199 GVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 253
Query: 297 KLR 299
R
Sbjct: 254 SRR 256
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 52.8 bits (125), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
+D++ +FK+ D++ DG +S EL LR GS A+ EVQ ++ +DT+G G +D+ EF+
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFI 60
Query: 417 A 417
+
Sbjct: 61 S 61
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 429 EHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFV 488
+ + + F FD +G+G I +EL DAL G+ +V + E+DTD DG I ++EF+
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQR-MMAEIDTDGDGFIDFNEFI 60
Query: 489 A 489
+
Sbjct: 61 S 61
Score = 32.3 bits (72), Expect = 0.66, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 394 EVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIEPNEL 451
+++ + + DTNG G + E L L + DE + + + D DG+G+I+ NE
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEF 59
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 94/236 (39%), Gaps = 39/236 (16%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDD---VRRE 101
P+ N++ + LG G FG + A ++ + L++ D+ + E
Sbjct: 44 PRNNLQ----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99
Query: 102 VAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTER-AAAAVTRT 160
+ IM HL ++ +IV+L AC V ++ E C G+L + + + E A A+ +
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 161 IVEVVQLCH-------------KHGVIHRDLKPENFLFANKKENSPLKAIDFGLS----- 202
+ L H IHRD+ N L N K DFGL+
Sbjct: 160 TLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN---GHVAKIGDFGLARDIMN 216
Query: 203 ---IFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILY-ILLCGVPPF 253
K R +MAPE + Y + D+WS G++L+ I G+ P+
Sbjct: 217 DSNYIVKGNARLPV-----KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 52.8 bits (125), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 350 FLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGT 409
FLS E + + K F D+D G +ST EL +R G + E+ +I VD +G GT
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGT 72
Query: 410 LDYGEFLAVLLHLRRMAND 428
+D+ EFL ++ +R+M D
Sbjct: 73 IDFEEFLVMM--VRQMKED 89
Score = 38.1 bits (87), Expect = 0.011, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 28/58 (48%)
Query: 434 AFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
AF FD DG G I EL + G + + I EVD D G I ++EF+ MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVMM 82
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 49 IEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHL 108
+ +RY + R++G G FG YL D E +A K + + I E I K +
Sbjct: 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-----ESKIYKMM 59
Query: 109 PKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRI-VARGHYTERAAAAVTRTIVEVVQL 167
I +++ + + +VMEL G L D ++ + + ++ ++
Sbjct: 60 QGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEY 118
Query: 168 CHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS 202
H IHRD+KP+NFL K+ + + IDFGL+
Sbjct: 119 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y V R +G G FGV + + + +A K +R D +R E K L +
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCT 65
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH-YTERAAAAVTRTIVEVVQLCHKH 171
I ++ ++ LV++L G L D + G ++ + A + ++ VQ H+
Sbjct: 66 GIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK 124
Query: 172 GVIHRDLKPENFLFA--NKKENSPLKAIDFGLSIFFK--------PGERFSEIVGSPYYM 221
+++RD+KP+NFL N K + + +DFG+ F++ P + G+ YM
Sbjct: 125 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYM 184
Query: 222 APEV-LKRNYGPEIDIWSAGVILYILLCGVPPF 253
+ L R D+ + G + L G P+
Sbjct: 185 SINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 217
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 16/256 (6%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPK 110
+R + R +G G+FG + I +I K T+ + + + A+
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAV-TRTIVEVVQLCH 169
+ IV L +N V ++MELC GEL + R + A+ + + +
Sbjct: 450 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 170 KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGS-PY-YMAPEVLK 227
+HRD+ N L + +K DFGLS + + + G P +MAPE +
Sbjct: 509 SKRFVHRDIAARNVLVS---ATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
Query: 228 -RNYGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRGLID-FKRDPW-PNVSES 283
R + D+W GV ++ IL+ GV PF QGV + G I+ +R P PN +
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMPPNCPPT 620
Query: 284 AKSLVRQMLEPDPKLR 299
SL+ + DP R
Sbjct: 621 LYSLMTKCWAYDPSRR 636
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 53 YLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNS 112
Y V R +G G FGV + + + +A K +R D +R E K L +
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCT 66
Query: 113 SIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGH-YTERAAAAVTRTIVEVVQLCHKH 171
I ++ ++ LV++L G L D + G ++ + A + ++ VQ H+
Sbjct: 67 GIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK 125
Query: 172 GVIHRDLKPENFLFA--NKKENSPLKAIDFGLSIFFK--------PGERFSEIVGSPYYM 221
+++RD+KP+NFL N K + + +DFG+ F++ P + G+ YM
Sbjct: 126 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYM 185
Query: 222 APEV-LKRNYGPEIDIWSAGVILYILLCGVPPF 253
+ L R D+ + G + L G P+
Sbjct: 186 SINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 218
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 350 FLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGT 409
FLS E + + K F D+D G +ST EL +R G + E+ +IE VD +G GT
Sbjct: 2 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 61
Query: 410 LDYGEFLAVLLH 421
+D+ EFL +++
Sbjct: 62 IDFEEFLVMMVR 73
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 430 HLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVA 489
AF FD DG G I EL + G + + + I +EVD D G I ++EF+
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 69
Query: 490 MM 491
MM
Sbjct: 70 MM 71
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 351 LSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTL 410
L+ E++ + KE F D DN+G +S+ EL +R+ G +E+EV L+ +D +G +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 411 DYGEFLAVL 419
++ EFLA++
Sbjct: 64 EFSEFLALM 72
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 433 KAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMM 491
+AF+ FDKD NG I +EL + G ND+ E+D D + I + EF+A+M
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 93/236 (39%), Gaps = 39/236 (16%)
Query: 45 PKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDD---VRRE 101
P+ N++ + LG G FG + A ++ + L++ D+ + E
Sbjct: 44 PRNNLQ----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99
Query: 102 VAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTER-AAAAVTRT 160
+ IM HL ++ +IV+L AC V ++ E C G+L + + + E A A+ +
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 161 IVEVVQLCH-------------KHGVIHRDLKPENFLFANKKENSPLKAIDFGLS----- 202
L H IHRD+ N L N K DFGL+
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN---GHVAKIGDFGLARDIMN 216
Query: 203 ---IFFKPGERFSEIVGSPYYMAPE-VLKRNYGPEIDIWSAGVILY-ILLCGVPPF 253
K R +MAPE + Y + D+WS G++L+ I G+ P+
Sbjct: 217 DSNYIVKGNARLPV-----KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 28/228 (12%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR---REVAIMKH 107
DR + + LGRG FG + C++++ + L+ + R E+ I+ H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 108 LPKNSSIVSLKEAC-EDDNAVHLVMELCEGGELFDRIVA-RGHYTERAAA---------- 155
+ + ++V+L AC + + +++E C+ G L + + R + A
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 156 -----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPG 208
+ + + ++ IHRDL N L + E + +K DFGL+ I P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPD 194
Query: 209 ERFSEIVGSPY-YMAPE-VLKRNYGPEIDIWSAGVILY-ILLCGVPPF 253
P +MAPE + R Y + D+WS GV+L+ I G P+
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 42/196 (21%)
Query: 100 REVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTR 159
R A+++ ++ ++V L D + ++ C G+L + +V R +++ + R
Sbjct: 77 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 136
Query: 160 TI---VEVVQLCH-------------KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSI 203
T+ +E H H V+H+DL N L +K +K D GL
Sbjct: 137 TVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN---VKISDLGL-- 191
Query: 204 FFKPGERFSEIVGSPYY------------MAPE-VLKRNYGPEIDIWSAGVILY-ILLCG 249
F E+ + YY MAPE ++ + + DIWS GV+L+ + G
Sbjct: 192 -------FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG 244
Query: 250 VPPFWAESEQGVAQAI 265
+ P+ S Q V + I
Sbjct: 245 LQPYCGYSNQDVVEMI 260
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 42/196 (21%)
Query: 100 REVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTR 159
R A+++ ++ ++V L D + ++ C G+L + +V R +++ + R
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 160 TI---VEVVQLCH-------------KHGVIHRDLKPENFLFANKKENSPLKAIDFGLSI 203
T+ +E H H V+H+DL N L +K +K D GL
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN---VKISDLGL-- 174
Query: 204 FFKPGERFSEIVGSPYY------------MAPE-VLKRNYGPEIDIWSAGVILY-ILLCG 249
F E+ + YY MAPE ++ + + DIWS GV+L+ + G
Sbjct: 175 -------FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG 227
Query: 250 VPPFWAESEQGVAQAI 265
+ P+ S Q V + I
Sbjct: 228 LQPYCGYSNQDVVEMI 243
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 9/144 (6%)
Query: 52 RYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKN 111
RY V R+LG G F +LC D + +A K + + T +D+++ + + P +
Sbjct: 32 RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSD 91
Query: 112 SSIVSLKEACED-----DNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQ 166
+ + + +D N +H+ M G + + + +Y V I +V+Q
Sbjct: 92 PNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQ 151
Query: 167 ----LCHKHGVIHRDLKPENFLFA 186
L K +IH D+KPEN L
Sbjct: 152 GLDYLHSKCKIIHTDIKPENILMC 175
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 351 LSVEEVEDIKEMFKKIDSD--NDGVVSTDELKAGLRNFGSQLAESEV-QMLIEAVDTNGK 407
SV E+E + E+FKKI S +DG+++ +E + L F + ES + + DT
Sbjct: 11 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHN 68
Query: 408 GTLDYGEFLAVLLHLRRMAN-DEHLHKAFSYFDKDGNGYIEPNELRD----ALMEDGADD 462
G L + EF L A D+ +H +F +D G+IE E++ L E G +
Sbjct: 69 GILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNL 128
Query: 463 CTDVANDI----FQEVDTDKDGLISYDEFVAMM 491
V DI F+E DT DG I +E+ +++
Sbjct: 129 KDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLV 161
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 422 LRRMANDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGL 481
++ ++E + +AF DKDGNGYI ELR + G + +++ +E D D DG
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 81
Query: 482 ISYDEFVAMM 491
++Y+EFV MM
Sbjct: 82 VNYEEFVQMM 91
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E+I+E F+ D D +G +S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 88
Query: 417 AVL 419
++
Sbjct: 89 QMM 91
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 39/275 (14%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR------EVAIMKHLPK 110
RELG+G FG+ Y + + R+++ ++ ++ ++T + +R E ++MK
Sbjct: 23 RELGQGSFGMVY---EGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC-- 168
+ +V L +VMEL G+L + + E T+ E++Q+
Sbjct: 80 H-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 169 --------HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-------IFFKPGERFSE 213
+ +HRDL N + A+ + +K DFG++ K G+
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAH---DFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 214 IVGSPYYMAPEVLKRN-YGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRGLID 271
+ +MAPE LK + D+WS GV+L+ I P+ S + V + ++ G
Sbjct: 196 V----RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 272 FKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVL 306
+ D N E L+R + +PK+R T +++
Sbjct: 252 DQPD---NCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 39/275 (14%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR------EVAIMKHLPK 110
RELG+G FG+ Y + + R+++ ++ ++ ++T + +R E ++MK
Sbjct: 20 RELGQGSFGMVY---EGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 76
Query: 111 NSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLC-- 168
+ +V L +VMEL G+L + + E T+ E++Q+
Sbjct: 77 H-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 169 --------HKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS-------IFFKPGERFSE 213
+ +HRDL N + A+ + +K DFG++ K G+
Sbjct: 136 IADGMAYLNAKKFVHRDLAARNCMVAH---DFTVKIGDFGMTRDIXETDXXRKGGKGLLP 192
Query: 214 IVGSPYYMAPEVLKRN-YGPEIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRGLID 271
+ +MAPE LK + D+WS GV+L+ I P+ S + V + ++ G
Sbjct: 193 V----RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 248
Query: 272 FKRDPWPNVSESAKSLVRQMLEPDPKLRLTAKQVL 306
+ D N E L+R + +PK+R T +++
Sbjct: 249 DQPD---NCPERVTDLMRMCWQFNPKMRPTFLEIV 280
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E++KE F+ D D +G +S EL+ + N G +L + EV +I D +G G ++Y EF+
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 63
Query: 417 AVLL 420
V++
Sbjct: 64 KVMM 67
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 427 NDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDE 486
++E L +AF FDKD NG+I ELR + G + +++ +E D D DG I+Y+E
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
Query: 487 FVAMM 491
FV +M
Sbjct: 62 FVKVM 66
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 334 SMMNRFKRKALRVIAEFLSVEEVEDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAES 393
S R +R V A F + +V++ KE F+ ID D DG +S ++++A + G E
Sbjct: 35 SQKRRAQRSGSNVFAMF-TQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQ 93
Query: 394 EVQMLIEAVDTNGKGTLDYGEFLAVLLHLRRMANDEH--LHKAFSYFDKDGNGYIEPNEL 451
E+ ++ G +++ FL + R DE + AF+ FD +G+G + L
Sbjct: 94 ELDSMV----AEAPGPINFTMFLTIFGD-RIAGTDEEDVIVNAFNLFD-EGDGKCKEETL 147
Query: 452 RDALMEDGADDCTDVANDIFQEVDTDKDGLISYDEFVAMMKTG 494
+ +L G D + E D +GLI +F ++ G
Sbjct: 148 KRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKG 190
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 28/228 (12%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR---REVAIMKH 107
DR + + LGRG FG + C++++ + L+ + R E+ I+ H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 108 LPKNSSIVSLKEAC-EDDNAVHLVMELCEGGELFDRIVA-RGHYTERAAA---------- 155
+ + ++V+L AC + + +++E C+ G L + + R + A
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 156 -----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPG 208
+ + + ++ IHRDL N L + E + +K DFGL+ I P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPD 203
Query: 209 ERFSEIVGSPY-YMAPE-VLKRNYGPEIDIWSAGVILY-ILLCGVPPF 253
P +MAPE + R Y + D+WS GV+L+ I G P+
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 27/227 (11%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR---REVAIMKH 107
DR + + LGRG FG + C++++ + L+ + R E+ I+ H
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 108 LPKNSSIVSLKEAC-EDDNAVHLVMELCEGGELFDRI---------------VARGHYTE 151
+ + ++V+L AC + + +++E C+ G L + + + T
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 152 RAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPGE 209
+ + + ++ IHRDL N L + E + +K DFGL+ I P
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDX 204
Query: 210 RFSEIVGSPY-YMAPE-VLKRNYGPEIDIWSAGVILY-ILLCGVPPF 253
P +MAPE + R Y + D+WS GV+L+ I G P+
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 15/183 (8%)
Query: 124 DNAVHLVMELCEGGELFDRIVARGHYTERAAAAV-TRTIVEVVQLCHKHGVIHRDLKPEN 182
+N V ++MELC GEL + R + A+ + + + +HRD+ N
Sbjct: 82 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 141
Query: 183 FLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGS-PY-YMAPEVLK-RNYGPEIDIWSA 239
L + +K DFGLS + + + G P +MAPE + R + D+W
Sbjct: 142 VLVS---ATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 240 GVILY-ILLCGVPPFWAESEQGVAQAILRGLI-DFKRDPW-PNVSESAKSLVRQMLEPDP 296
GV ++ IL+ GV PF QGV + G I + +R P PN + SL+ + DP
Sbjct: 199 GVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 253
Query: 297 KLR 299
R
Sbjct: 254 SRR 256
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 427 NDEHLHKAFSYFDKDGNGYIEPNELRDALMEDGADDCTDVANDIFQEVDTDKDGLISYDE 486
++E + +AF FDKDGNGYI +LR + G + +++ +E D D DG ++Y++
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYED 64
Query: 487 FVAMM 491
FV MM
Sbjct: 65 FVQMM 69
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 357 EDIKEMFKKIDSDNDGVVSTDELKAGLRNFGSQLAESEVQMLIEAVDTNGKGTLDYGEFL 416
E+I+E F+ D D +G +S +L+ + N G +L + EV +I D +G G ++Y +F+
Sbjct: 7 EEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFV 66
Query: 417 AVL 419
++
Sbjct: 67 QMM 69
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 28/228 (12%)
Query: 51 DRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVR---REVAIMKH 107
DR + + LGRG FG + C++++ + L+ + R E+ I+ H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 108 LPKNSSIVSLKEAC-EDDNAVHLVMELCEGGELFDRIVA-RGHYTERAAA---------- 155
+ + ++V+L AC + + ++ E C+ G L + + R + A
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 156 -----AVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLS--IFFKPG 208
+ + + ++ IHRDL N L + E + +K DFGL+ I P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPD 194
Query: 209 ERFSEIVGSPY-YMAPE-VLKRNYGPEIDIWSAGVILY-ILLCGVPPF 253
P +MAPE + R Y + D+WS GV+L+ I G P+
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 17/192 (8%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVS 116
+ +G+GEFG L R + + C ++ E ++M L ++ +
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKVAVKC-------IKNDATAQAFLAEASVMTQLRHSNLVQL 79
Query: 117 LKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT--IVEVVQLCHKHGVI 174
L E+ +++V E G L D + +RG + + + E ++ + +
Sbjct: 80 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 139
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY-YMAPEVLK-RNYGP 232
HRDL N L + E++ K DFGL+ K + P + APE L+ + +
Sbjct: 140 HRDLAARNVLVS---EDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKFST 193
Query: 233 EIDIWSAGVILY 244
+ D+WS G++L+
Sbjct: 194 KSDVWSFGILLW 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 29/267 (10%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
VP+E ++ LV+R LG G+FG ++ + +A KS+ + ++ D E
Sbjct: 20 VPRETLK---LVER-LGAGQFGEVWMGY-YNGHTKVAVKSLKQ----GSMSPDAFLAEAN 70
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTI 161
+MK L ++ +V L A ++++ E E G L D + T + I
Sbjct: 71 LMKQL-QHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 128
Query: 162 VEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY-- 219
E + + IHRDL+ N L ++ K DFGL+ + E ++ G+ +
Sbjct: 129 AEGMAFIEERNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNE-YTAREGAKFPI 184
Query: 220 -YMAPEVLKRNYGP---EIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRGLIDFKR 274
+ APE + NYG + D+WS G++L I+ G P+ + V Q + RG +
Sbjct: 185 KWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 242
Query: 275 DPWPNVSESAKSLVRQMLEPDPKLRLT 301
D N E L+R + P+ R T
Sbjct: 243 D---NCPEELYQLMRLCWKERPEDRPT 266
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
+P+E+I+ LV R LG G+FG ++ ++ ++ A K++ + ++ E
Sbjct: 10 IPRESIK---LVKR-LGAGQFGEVWMGYYNNSTKV-AVKTLKPGTMSVQAFLE----EAN 60
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVAR--GHYTERAAAAVTRTI 161
+MK L ++ +V L + ++++ E G L D + + G + I
Sbjct: 61 LMKTL-QHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI 119
Query: 162 VEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY-- 219
E + + IHRDL+ N L + E+ K DFGL+ + E ++ G+ +
Sbjct: 120 AEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIEDNE-YTAREGAKFPI 175
Query: 220 -YMAPEVLKRNYGP---EIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRG 268
+ APE + N+G + D+WS G++LY I+ G P+ + V A+ +G
Sbjct: 176 KWTAPEAI--NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQG 227
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 351 LSVEEVEDIKEMFKKIDSD--NDGVVSTDELKAGLRNFGSQLAESE-VQMLIEAVDTNGK 407
SV E+E + E+FKKI S +DG+++ +E + L F + ES + + DT
Sbjct: 42 FSVSEIEALYELFKKISSAVIDDGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHN 99
Query: 408 GTLDYGEFLAVLLHLRRMAN-DEHLHKAFSYFDKDGNGYIEPNELRD----ALMEDGADD 462
G L + EF L A D+ +H +F +D G+IE E++ L E G +
Sbjct: 100 GILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNL 159
Query: 463 CTDVANDI----FQEVDTDKDGLISYDEFVAMM 491
V DI F+E DT DG I +E+ +++
Sbjct: 160 KDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLV 192
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 17/192 (8%)
Query: 57 RELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMKHLPKNSSIVS 116
+ +G+GEFG L R + + C ++ E ++M L ++ +
Sbjct: 12 QTIGKGEFGDVMLGDYRGNKVAVKC-------IKNDATAQAFLAEASVMTQLRHSNLVQL 64
Query: 117 LKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT--IVEVVQLCHKHGVI 174
L E+ +++V E G L D + +RG + + + E ++ + +
Sbjct: 65 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 124
Query: 175 HRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY-YMAPEVLK-RNYGP 232
HRDL N L + E++ K DFGL+ K + P + APE L+ + +
Sbjct: 125 HRDLAARNVLVS---EDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKFST 178
Query: 233 EIDIWSAGVILY 244
+ D+WS G++L+
Sbjct: 179 KSDVWSFGILLW 190
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 14/209 (6%)
Query: 45 PKENIEDRYLV---DRELGRGEFG-VTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRR 100
PKE DR L+ D+ELG G FG V I K + D++
Sbjct: 2 PKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 61
Query: 101 EVAIMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRT 160
E +M+ L N IV + CE ++ + LVME+ E G L + H ++ +
Sbjct: 62 EANVMQQL-DNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 119
Query: 161 IVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGER-FSEIVGSPY 219
+ ++ + +HRDL N L + K DFGLS + E + +
Sbjct: 120 VSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENXYKAQTHGKW 176
Query: 220 ---YMAPEVLK-RNYGPEIDIWSAGVILY 244
+ APE + + + D+WS GV+++
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMW 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 29/267 (10%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
VP+E ++ LV+R LG G+FG ++ + +A KS+ + ++ D E
Sbjct: 16 VPRETLK---LVER-LGAGQFGEVWMGY-YNGHTKVAVKSLKQ----GSMSPDAFLAEAN 66
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTI 161
+MK L ++ +V L A ++++ E E G L D + T + I
Sbjct: 67 LMKQL-QHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 124
Query: 162 VEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY-- 219
E + + IHRDL+ N L ++ K DFGL+ + E ++ G+ +
Sbjct: 125 AEGMAFIEERNYIHRDLRAANILVSD---TLSCKIADFGLARLIEDNE-YTAREGAKFPI 180
Query: 220 -YMAPEVLKRNYGP---EIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRGLIDFKR 274
+ APE + NYG + D+WS G++L I+ G P+ + V Q + RG +
Sbjct: 181 KWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 238
Query: 275 DPWPNVSESAKSLVRQMLEPDPKLRLT 301
D N E L+R + P+ R T
Sbjct: 239 D---NCPEELYQLMRLCWKERPEDRPT 262
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 29/267 (10%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
VP+E ++ LV+R LG G+FG ++ + +A KS+ + ++ D E
Sbjct: 15 VPRETLK---LVER-LGAGQFGEVWMGY-YNGHTKVAVKSLKQ----GSMSPDAFLAEAN 65
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTI 161
+MK L ++ +V L A ++++ E E G L D + T + I
Sbjct: 66 LMKQL-QHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 123
Query: 162 VEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY-- 219
E + + IHRDL+ N L ++ K DFGL+ + E ++ G+ +
Sbjct: 124 AEGMAFIEERNYIHRDLRAANILVSD---TLSCKIADFGLARLIEDNE-YTAREGAKFPI 179
Query: 220 -YMAPEVLKRNYGP---EIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRGLIDFKR 274
+ APE + NYG + D+WS G++L I+ G P+ + V Q + RG +
Sbjct: 180 KWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 237
Query: 275 DPWPNVSESAKSLVRQMLEPDPKLRLT 301
D N E L+R + P+ R T
Sbjct: 238 D---NCPEELYQLMRLCWKERPEDRPT 261
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 29/267 (10%)
Query: 44 VPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVA 103
VP+E ++ LV+R LG G+FG ++ + +A KS+ + + D E
Sbjct: 10 VPRETLK---LVER-LGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSP----DAFLAEAN 60
Query: 104 IMKHLPKNSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARG--HYTERAAAAVTRTI 161
+MK L ++ +V L A ++++ E E G L D + T + I
Sbjct: 61 LMKQL-QHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 118
Query: 162 VEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPY-- 219
E + + IHRDL+ N L ++ K DFGL+ + E ++ G+ +
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNE-YTAREGAKFPI 174
Query: 220 -YMAPEVLKRNYGP---EIDIWSAGVILY-ILLCGVPPFWAESEQGVAQAILRGLIDFKR 274
+ APE + NYG + D+WS G++L I+ G P+ + V Q + RG +
Sbjct: 175 KWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 232
Query: 275 DPWPNVSESAKSLVRQMLEPDPKLRLT 301
D N E L+R + P+ R T
Sbjct: 233 D---NCPEELYQLMRLCWKERPEDRPT 256
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,879,861
Number of Sequences: 62578
Number of extensions: 679738
Number of successful extensions: 6237
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 415
Number of HSP's that attempted gapping in prelim test: 2151
Number of HSP's gapped (non-prelim): 1868
length of query: 527
length of database: 14,973,337
effective HSP length: 103
effective length of query: 424
effective length of database: 8,527,803
effective search space: 3615788472
effective search space used: 3615788472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)