BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009734
(527 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302143985|emb|CBI23090.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 306/512 (59%), Positives = 357/512 (69%), Gaps = 12/512 (2%)
Query: 19 GIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI 78
G+ +WE FL RM LRVLLVEADDSTRQI+ ALLRK SY+V AVPDGLKAWEVLK RP NI
Sbjct: 27 GVVRWERFLPRMVLRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNI 86
Query: 79 DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
DLILTEV+LPSISGFALLTLVMEHEICKNIPVIMMSS S++TVYKCM+RGAAD+LVKPV
Sbjct: 87 DLILTEVELPSISGFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPV 146
Query: 139 RRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGE 198
RRNEL+NLWQHVWRRQSS VSGN QDESV QQK+EATSEN+ SNHSS ++ACIQ E
Sbjct: 147 RRNELKNLWQHVWRRQSSTVSGNGPQDESVAQQKVEATSENNPTSNHSSDHVACIQKNKE 206
Query: 199 FIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSLV 258
+ K SD QSSC+KPD EAESA++E M D S W +SL +D KMQ +E G K L+
Sbjct: 207 ALNKVSDAQSSCSKPDLEAESAYMETMQDFSNPTWSRSLVSDTKMQKNEECAKLGPKFLM 266
Query: 259 PVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCN---VPVNSPRQVIDFMS 315
EA G+ AAC++ NT E E E SE C + +S R+ ID +
Sbjct: 267 HNKEAGGTLEAACRDVNTMTQ-PEAVEPENDGQGANAPSEACGNNAILGSSSREAIDLIG 325
Query: 316 AFNNHKP------PSNNGASRFDSSPQLDLSLRRTHPDGFENQV-ERKFILRHSNASAFT 368
F+N K SNNG + DS PQLDLSLRR+HP ENQV + + L HSN SAF+
Sbjct: 326 VFDNSKKCTYGNSSSNNGTKKSDSIPQLDLSLRRSHPSSPENQVADERHTLNHSNGSAFS 385
Query: 369 RYTNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSLATG 428
RY N+ +P H +GV NQQK F DS+K S ++T NS + TLSTQRSV SLAT
Sbjct: 386 RYINRSLQPPHLPSTGVFNQQKNFGADSDKRLSQLVTGYNSDITSPTLSTQRSVISLATS 445
Query: 429 HSKQSELAVSYPQQRPCPVPVSVKV-NSTNQAMHKLDHKLDSLEDLGHISPATDQSASSS 487
S + E+A+ PQQR P PV NST+Q HK +HKLDSLE GH SPATDQ++SSS
Sbjct: 446 PSGRVEIALCGPQQRAFPAPVPQNANNSTSQTNHKPEHKLDSLEGQGHFSPATDQNSSSS 505
Query: 488 FCNGAVSRLNSMGYGSACGSNSNLDQVTAGRA 519
F NG S LNS G GS CGSN N + V +A
Sbjct: 506 FGNGGASNLNSFGCGSICGSNGNANTVAVVQA 537
>gi|157399680|gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]
Length = 698
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 310/567 (54%), Positives = 375/567 (66%), Gaps = 75/567 (13%)
Query: 19 GIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI 78
G+A+WE FL+RM LRVLL+EADDSTRQI+ ALLRK SYRVTAVPDGLKAWE+L+GRP NI
Sbjct: 49 GVARWENFLRRMRLRVLLIEADDSTRQIIGALLRKCSYRVTAVPDGLKAWEILRGRPHNI 108
Query: 79 DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
DLILTEVDLP+ISGFALLTL+ EHEICKNIPVIMMS+QDSVSTVYKCM+RGAADYLVKP+
Sbjct: 109 DLILTEVDLPAISGFALLTLIAEHEICKNIPVIMMSAQDSVSTVYKCMLRGAADYLVKPI 168
Query: 139 RRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGE 198
RRNEL+NLWQHVWR+QSS + N+ QDESV QQ++EATSEN+AAS S+G MACIQ E
Sbjct: 169 RRNELKNLWQHVWRKQSSNLGINDPQDESVAQQQLEATSENNAASKRSNGRMACIQRNTE 228
Query: 199 FIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSLV 258
IEKGSDEQSSCTKP+ EAES VE+M + S+ WGKS +D+ QN E +N+GQK L
Sbjct: 229 QIEKGSDEQSSCTKPEVEAESVRVENMQEFSQPKWGKSFPSDIISQNKEEYLNFGQKFLT 288
Query: 259 PVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCN---VPVNSPRQVIDFMS 315
+EA+GSEV CK+ NT +D E+H D I+T+E + V VNS R+ ID +
Sbjct: 289 HGSEAEGSEVDTCKDDNTTPP-GKDIRPESHNRDAIITNEDFDNNYVLVNSSRKAIDLIG 347
Query: 316 AFNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQ-VERKFILRHSNASAFTRYTNKP 374
+F+N+ S+ G S+FDS PQLDLSLRR+H GF N E + L SNASAFTRYTN+
Sbjct: 348 SFHNYPNCSSEGTSKFDSLPQLDLSLRRSHFSGFCNSYTEERRTLGTSNASAFTRYTNRA 407
Query: 375 SEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSL--------- 425
S+ + ++ CN QKE+ T+SE+ SN T+C+S P T QRS+ SL
Sbjct: 408 SQTPQTKIANACNHQKEYGTNSEQMLSNTFTSCSSDNPGIT---QRSIISLAAGHSKESE 464
Query: 426 -ATGHSKQSELAVSYP-----------------------QQRPCPVPVSVKV-------- 453
AT S+Q V P Q P P S V
Sbjct: 465 VATSCSQQKVFPVPIPVKGIRVNNLYTGFGSALPPMFCTQSGSSPTPSSNSVPQQEPSFQ 524
Query: 454 --------------------------NSTNQAMHKLDHKLDSLEDLGHISPATDQSASSS 487
++ NQ ++K +HKLD LED GH+S ATDQSASSS
Sbjct: 525 MNILYQSSLENNNFEQQCDPHGQNTNDAANQNVYKQEHKLDPLEDRGHLSSATDQSASSS 584
Query: 488 FCNGAVSRLNSMGYGSACGSNSNLDQV 514
FCNG VS NS+GYGS CGSNSN+D V
Sbjct: 585 FCNGGVSHHNSIGYGSGCGSNSNVDHV 611
>gi|224132554|ref|XP_002321349.1| pseudo response regulator [Populus trichocarpa]
gi|222868345|gb|EEF05476.1| pseudo response regulator [Populus trichocarpa]
Length = 687
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 293/574 (51%), Positives = 357/574 (62%), Gaps = 64/574 (11%)
Query: 2 GDVVLNDEELKEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTA- 60
G+V ++ + + G+ +WE FL RM LRVLLVEADDSTRQI+ ALLRK SY+ A
Sbjct: 35 GEVKRKRKKKEGEGSDNGLVRWERFLPRMVLRVLLVEADDSTRQIIAALLRKCSYKAVAT 94
Query: 61 VPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVS 120
V DGLKAWE+LK RP NIDLILTEVDLPS+SG+ALLTL+MEHEICKNIPVIMMSSQDS+
Sbjct: 95 VSDGLKAWEILKERPHNIDLILTEVDLPSVSGYALLTLIMEHEICKNIPVIMMSSQDSIK 154
Query: 121 TVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSEND 180
TVYKCM+RGAADYLVKP+R+NELRNLWQHVWR+QSS+ GN DESVGQ K EATSEN+
Sbjct: 155 TVYKCMLRGAADYLVKPIRKNELRNLWQHVWRKQSSLGGGNGPHDESVGQDKTEATSENN 214
Query: 181 AASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQND 240
A NHSSG MA IQ E K SD QSSCTKP EAE AH+E+M + + +W K D
Sbjct: 215 ADGNHSSGEMASIQRSKEQAVKRSDSQSSCTKPGLEAEGAHMENMQEFLQPVWSKFSLTD 274
Query: 241 VKMQNHEARVNYGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVC 300
MQ HE VN GQK LV +EA+GS A C+++N + D++ + R + E C
Sbjct: 275 TNMQKHEEHVNLGQKLLVRDSEAEGSATAVCEDSN-KITVDKEITPGSGRVTANIAIEGC 333
Query: 301 N---VPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQV-ERK 356
+ NSPR+ IDFM A NH NN F SSP LDLSLRR+HP GFE QV E +
Sbjct: 334 DKIGALANSPREAIDFMGASTNHS-SFNNVEIHFCSSPHLDLSLRRSHPSGFETQVTEER 392
Query: 357 FILRHSNASAFTRYTNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAATL 416
LRHSNASAFT YTN+ S+ HS+L+ NQ+ EF + + S+ + NS +
Sbjct: 393 HTLRHSNASAFTWYTNRASQLPHSALANTGNQE-EFRANYDGKISSNVNGYNSDALSLAP 451
Query: 417 STQRSVNSLATGHSKQSELAVSYPQQRPCPVPVSVKVNSTN------------------- 457
ST+RS SLA G +K+ E+ S ++ P+ + VK N
Sbjct: 452 STRRSAISLAAGQTKEYEIVTSSSGEKVFPIHIPVKDTRFNNLCNSYGAVLPPMMSQSSA 511
Query: 458 ---QAMHKL----------------------------------DHKLDSLEDLGHISPAT 480
+ +HK+ ++KLDSLE HIS AT
Sbjct: 512 SQKEPIHKVNPFQCSNYGSTSVQLCDRLGQNANDSINGSLQKQENKLDSLEGREHISSAT 571
Query: 481 DQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQV 514
DQSASSSFCNGA S NS+GYGSA GS SN DQ+
Sbjct: 572 DQSASSSFCNGAASHFNSIGYGSASGSYSNADQI 605
>gi|359490833|ref|XP_003634174.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 688
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 266/444 (59%), Positives = 312/444 (70%), Gaps = 11/444 (2%)
Query: 19 GIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI 78
G+ +WE FL RM LRVLLVEADDSTRQI+ ALLRK SY+V AVPDGLKAWEVLK RP NI
Sbjct: 27 GVVRWERFLPRMVLRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNI 86
Query: 79 DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
DLILTEV+LPSISGFALLTLVMEHEICKNIPVIMMSS S++TVYKCM+RGAAD+LVKPV
Sbjct: 87 DLILTEVELPSISGFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPV 146
Query: 139 RRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGE 198
RRNEL+NLWQHVWRRQSS VSGN QDESV QQK+EATSEN+ SNHSS ++ACIQ E
Sbjct: 147 RRNELKNLWQHVWRRQSSTVSGNGPQDESVAQQKVEATSENNPTSNHSSDHVACIQKNKE 206
Query: 199 FIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSLV 258
+ K SD QSSC+KPD EAESA++E M D S W +SL +D KMQ +E G K L+
Sbjct: 207 ALNKVSDAQSSCSKPDLEAESAYMETMQDFSNPTWSRSLVSDTKMQKNEECAKLGPKFLM 266
Query: 259 PVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCN---VPVNSPRQVIDFMS 315
EA G+ AAC++ NT E E E SE C + +S R+ ID +
Sbjct: 267 HNKEAGGTLEAACRDVNTMTQ-PEAVEPENDGQGANAPSEACGNNAILGSSSREAIDLIG 325
Query: 316 AFNNHKP------PSNNGASRFDSSPQLDLSLRRTHPDGFENQV-ERKFILRHSNASAFT 368
F+N K SNNG + DS PQLDLSLRR+HP ENQV + + L HSN SAF+
Sbjct: 326 VFDNSKKCTYGNSSSNNGTKKSDSIPQLDLSLRRSHPSSPENQVADERHTLNHSNGSAFS 385
Query: 369 RYTNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSLATG 428
RY N+ +P H +GV NQQK F DS+K S ++T NS + TLSTQRSV SLAT
Sbjct: 386 RYINRSLQPPHLPSTGVFNQQKNFGADSDKRLSQLVTGYNSDITSPTLSTQRSVISLATS 445
Query: 429 HSKQSELAVSYPQQRPCPVPVSVK 452
S + E+A+ PQQR P PV V+
Sbjct: 446 PSGRVEIALCGPQQRAFPAPVPVR 469
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 47/66 (71%)
Query: 454 NSTNQAMHKLDHKLDSLEDLGHISPATDQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQ 513
NST+Q HK +HKLDSLE GH SPATDQ++SSSF NG S LNS G GS CGSN N +
Sbjct: 538 NSTSQTNHKPEHKLDSLEGQGHFSPATDQNSSSSFGNGGASNLNSFGCGSICGSNGNANT 597
Query: 514 VTAGRA 519
V +A
Sbjct: 598 VAVVQA 603
>gi|356518667|ref|XP_003528000.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 700
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 288/581 (49%), Positives = 356/581 (61%), Gaps = 96/581 (16%)
Query: 18 EGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN 77
+G +WE FL +M LRVLLVEADDSTRQI+ ALLRK SY+V AVPDGLKAWE+LKGRP N
Sbjct: 36 KGFMRWEKFLPKMILRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWELLKGRPHN 95
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
+DLILTEVDLPS+SG+ALLTL+MEHEICKNIPVIMMSSQDS+STVYKCM+RGAADYLVKP
Sbjct: 96 VDLILTEVDLPSVSGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKP 155
Query: 138 VRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKG 197
+R+NELRNLWQHVWRRQSS N QDESV QQK+EAT+EN+AASN SSG ACIQ
Sbjct: 156 IRKNELRNLWQHVWRRQSSTTGINGPQDESVAQQKVEATAENNAASNRSSGDAACIQRNM 215
Query: 198 EFIEKGSDEQSSCTKPDFEAESA---HVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQ 254
E IEKGSD QSSCTKPD EAES +++++ + S G++ + + Q E + GQ
Sbjct: 216 ELIEKGSDAQSSCTKPDCEAESGPVDNIDNIQEFSPLKCGEAYPSGTETQQVETSIRLGQ 275
Query: 255 KSLVPVTEAQGSEVAACK--EANTR----AHFDEDTELETHRSDVILTSEVCNVPVNSPR 308
++ + A G V+ CK EA+T HF E H + V +NS +
Sbjct: 276 TLMMHASHAGGLNVSICKNGEASTTDADPEHFGNGISGEAHDNHY--------VQMNSSK 327
Query: 309 QVIDFMSAFNNH-----KPPSNNGASRFDSSPQLDLSLRRTHPDGFENQV-ERKFILRHS 362
+ IDF+ AF+ H K + N +FD SPQLDLSLRR+ P FEN++ E + L HS
Sbjct: 328 EAIDFIGAFHTHPICTLKNSTVNCTGKFDLSPQLDLSLRRSRPSSFENELTEERHTLMHS 387
Query: 363 NASAFTRYTNKP---SEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAATLSTQ 419
NASAF RYTN+ S P + L +QQ++ + EKN S I T CNS ++T S Q
Sbjct: 388 NASAFKRYTNRQLQISTP--AVLINFSDQQRQQIANCEKNISRIATGCNS--DSSTPSMQ 443
Query: 420 RSVNS----------LATGHSKQ-------------SELAVSYPQQRPC----------- 445
R + S LAT HS+ ++L +Y P
Sbjct: 444 RCIVSPTTVQSKEPELATSHSQPGHSLPIPVKGVRFNDLCTTYGSVFPSVFRAQSGSPAM 503
Query: 446 PVPVSVKV-------------------------------NST-NQAMHKLDHKLDSLEDL 473
P P SV + N+T N ++ +HK ++ ED
Sbjct: 504 PSPNSVMLLEPNFQVNAFYQSNMKESSSEQLYEPGGPNGNTTQNHIVYTQEHKSENAEDQ 563
Query: 474 GHISPATDQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQV 514
GHISP TDQS SSSFCNG S LNS+GYGS CGS+SN+DQV
Sbjct: 564 GHISPTTDQSVSSSFCNGNASHLNSIGYGSNCGSSSNVDQV 604
>gi|255566892|ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
gi|223536313|gb|EEF37964.1| conserved hypothetical protein [Ricinus communis]
Length = 667
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 255/432 (59%), Positives = 311/432 (71%), Gaps = 7/432 (1%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ +WE L RM LRVLLVEADDSTRQI+ ALLRK SY+V AVPDGLKAWE+LKG+P NID
Sbjct: 32 VMRWEKLLPRMVLRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEMLKGKPHNID 91
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
LILTEV+LPSISG+ALLTL+MEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP+R
Sbjct: 92 LILTEVELPSISGYALLTLIMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPIR 151
Query: 140 RNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
+NELRNLWQHVWRRQSS+ N Q+ESVGQ EATSEN+ SNHSSG +A +Q+ +F
Sbjct: 152 KNELRNLWQHVWRRQSSLARENCPQEESVGQDTAEATSENNPESNHSSGDVARLQNNKDF 211
Query: 200 IEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSLVP 259
EKGSD QSSCTKPD EAESA V ++ ++ +WG + ND EAR++ GQK L+
Sbjct: 212 -EKGSDSQSSCTKPDLEAESAAVGNVREIFLPVWGPFILNDKTRHKDEARMDCGQKVLLH 270
Query: 260 VTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCN---VPVNSPRQVIDFMSA 316
+A GS VAACK++N +ED E E+ R++ +T E C+ VNS ++ IDFM A
Sbjct: 271 ENDAGGSAVAACKDSNQMI-VNEDVEPESQRTNAKITYEACDHNYFFVNSSKEAIDFMGA 329
Query: 317 FNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQV-ERKFILRHSNASAFTRYTNKPS 375
HK +N S+FD PQLDL L R H GFE QV E LRHS+ASAFTRY+N+P
Sbjct: 330 SAGHKSSLDNTKSKFDFVPQLDLCLTRRHSSGFEIQVLEDTRTLRHSHASAFTRYSNRPL 389
Query: 376 EPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSLATGHSKQSEL 435
+ H++ + V N QKE SE FS+ + NS P ST R++ SLA G +++SE
Sbjct: 390 QSIHTTWASVPN-QKEHGAYSEGKFSSNVGGYNSDVPGPPPSTARAIISLANGQTEESEK 448
Query: 436 AVSYPQQRPCPV 447
A+S QQ+ PV
Sbjct: 449 AISSTQQKVFPV 460
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 454 NSTNQAMHKLDHKLDSLEDLGHISPATDQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQ 513
++ N+ + K D +LD ED GHISP TDQSA+SSF NGA S LN MGYGS GSNSN+DQ
Sbjct: 530 DTANRTLQKQDKELDPPEDRGHISPTTDQSATSSFYNGAASHLN-MGYGSHSGSNSNVDQ 588
Query: 514 VTAGR 518
V R
Sbjct: 589 VANVR 593
>gi|356509155|ref|XP_003523317.1| PREDICTED: two-component response regulator-like APRR9-like
[Glycine max]
Length = 655
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 276/564 (48%), Positives = 331/564 (58%), Gaps = 98/564 (17%)
Query: 18 EGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN 77
+G+ +WE FL +M LRVLLVEADDSTRQI+ ALLRK SY+V AVPDGLKAWE+LKGRP N
Sbjct: 35 KGLMRWEKFLPKMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWELLKGRPHN 94
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
+DLILTEVDLPSISG+ALLTL+MEHEICKNIPVIMMSSQDS+STVYKCM+RGAADYLVKP
Sbjct: 95 VDLILTEVDLPSISGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKP 154
Query: 138 VRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKG 197
+R+NELRNLWQHVWRRQSS N QDESV QQK+EAT+EN+AASN SSG ACIQ
Sbjct: 155 IRKNELRNLWQHVWRRQSSTTGINGLQDESVAQQKVEATAENNAASNRSSGDAACIQRNI 214
Query: 198 EFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSL 257
E IEKGSD QSSCTKPD EAES V +M + S G++ + + Q E GQ +
Sbjct: 215 ELIEKGSDAQSSCTKPDCEAESDPVGNMQEFSLLKCGEAYPSGTETQQVETSFRLGQTLM 274
Query: 258 VPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAF 317
+ A G V+ K D+DT+ E + I
Sbjct: 275 MHDCHAGGLNVSIRKNGEASTTNDKDTDTEHFGNASI----------------------- 311
Query: 318 NNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQV-ERKFILRHSNASAFTRYTNKP-- 374
S N FD SPQLDLSLRR+ P FEN++ E + L HSNASAF RYT +
Sbjct: 312 ------SVNCTGNFDHSPQLDLSLRRSCPGSFENKLTEERHTLMHSNASAFKRYTTRQLQ 365
Query: 375 -SEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNS--YTP-----AATLSTQRSVNSLA 426
S P + L +QQ+E T+ EKN S+I T NS TP + + Q + LA
Sbjct: 366 ISMP--AVLINFSDQQREQITNCEKNISHIATGSNSDSSTPMQRCIVSPTTVQSKESELA 423
Query: 427 TGHSKQ-------------SELAVSY-------------PQQRPCPVPV-----SVKVN- 454
T H Q ++L +Y P P P V + +VN
Sbjct: 424 TSHPPQGHSLPIPVKGVRFNDLCTAYGSVLPSVFHTQSGPPAMPSPNSVVLLEPNFQVNA 483
Query: 455 ------------------------STNQAMHKLDHKLDSLEDLGHISPATDQSASSSFCN 490
+ N ++ +HK + ED GHISP TDQS SSSFCN
Sbjct: 484 FYQSNMKESSSEQLYESRGPNGNTTQNHIVYTQEHKSEHAEDRGHISPTTDQSVSSSFCN 543
Query: 491 GAVSRLNSMGYGSACGSNSNLDQV 514
G S LNS+GYGS CGS+SN+DQV
Sbjct: 544 GNASHLNSIGYGSNCGSSSNVDQV 567
>gi|357464211|ref|XP_003602387.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355491435|gb|AES72638.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 685
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 264/579 (45%), Positives = 348/579 (60%), Gaps = 91/579 (15%)
Query: 18 EGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN 77
+G+ +WE FL +M LRVLLVEADD TRQI+TALLRK +Y+V AV DGLKAWE+LKGRPR+
Sbjct: 42 KGLMRWEKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRS 101
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
IDLILTEVDLP+ISG+ALLTL+MEH+ICK+IPVIMMSSQDSVSTVYKCM+RGAADYLVKP
Sbjct: 102 IDLILTEVDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKP 161
Query: 138 VRRNELRNLWQHVWRR--QSSMVSG-NETQDESVGQQKIEATSENDAASNHSSGYMACIQ 194
+R NELRNLWQHVWRR QS+ +G N QDES QQK EAT+EN+AASN S G ACIQ
Sbjct: 162 IRINELRNLWQHVWRRQTQSAATAGINGPQDESDTQQKFEATAENNAASNRSGGDAACIQ 221
Query: 195 SKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQ 254
+ IEKGSD QSSCT+P+ EAES V++M + S+ ++ +++K + E ++ GQ
Sbjct: 222 RNKDLIEKGSDAQSSCTRPNMEAESGLVDNMHEFSQLKCAEAYPSEIKTR--ELDIHLGQ 279
Query: 255 KSLVPVTEAQGSEVA----------ACKEANTRAHFDEDTELETHRSDVILTSEVCN--- 301
+ + A G VA CK T A+ +D + + H + ++ EV +
Sbjct: 280 AVIAQDSHAGGLSVANCNNGVASTNNCKNGETGANNCKDGDDQEHFRNASISGEVHDNHY 339
Query: 302 VPVNS-PRQVIDFMSAFNNH-----KPPSNNGASRFDSSPQLDLSLRRTHPDGFENQV-E 354
V + S ++ ID + AF K S + +FD SPQLDLSLR +HP FE + E
Sbjct: 340 VQIYSTTKEAIDLIGAFRTDPNCSLKNSSIDCTGKFDHSPQLDLSLRSSHPSNFEKDLTE 399
Query: 355 RKFILRHSNASAFTRYTNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAA 414
+ L HSNASAF RYTN+ + + + +Q +E +T++E + S+ +
Sbjct: 400 ERHTLMHSNASAFKRYTNRQLQASPAVVINFSDQPREQKTNNENHNSD-----------S 448
Query: 415 TLSTQRSVNSLATGHSKQ-------------SELAVSY---------PQQRPCPVPVSVK 452
++ + + + LAT HS+Q ++L ++Y Q P +P SV
Sbjct: 449 SIPSMQKESELATSHSQQRHSLPIPVKGVRFNDLCMAYGSTLPPGFRTQSGPPSMPGSVV 508
Query: 453 V-------------------------------NST-NQAMHKLDHKLDSLEDLGHISPAT 480
NST NQ M+ +HK + ED ISP T
Sbjct: 509 FLEQNFQADAFYQSNVKQNNSEQLYEPRGPNGNSTPNQIMYTQEHKSEHPEDQRLISPTT 568
Query: 481 DQSASSSFC-NGAVSRLNSMGYGSACGSNSNLDQVTAGR 518
DQS SSSFC NG S NS+GYGS CGS+ N++QV R
Sbjct: 569 DQSVSSSFCNNGNASNFNSIGYGSNCGSSGNVEQVATFR 607
>gi|355469070|gb|ACU42265.2| pseudo response regulator 59 [Pisum sativum]
Length = 494
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/388 (53%), Positives = 267/388 (68%), Gaps = 14/388 (3%)
Query: 18 EGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN 77
+G+ +WE FL +M LRVLLVEADD TRQI+TALLRK +Y+V AV DGLKAWE+LKGRPRN
Sbjct: 31 KGLLRWEKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRN 90
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
DLILTEVDLPS+SG+ALL+L+MEH+ CK IPVIMMSSQDSVSTVYKCM+RGAADYLVKP
Sbjct: 91 FDLILTEVDLPSVSGYALLSLIMEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKP 150
Query: 138 VRRNELRNLWQHVWRR--QSSMVSG-NETQDESVGQQKIEATSENDAASNHSSGYMACIQ 194
+R NELRNLWQHVWRR QS+ +G N QDE QK+EAT+EN+AASN SSG ACIQ
Sbjct: 151 IRINELRNLWQHVWRRQSQSTATAGINGPQDEIDALQKVEATAENNAASNRSSGDAACIQ 210
Query: 195 SKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQ 254
+ IEKGSD QSSCTKP+ EAES V++M + ++ ++ +++K Q + R+ GQ
Sbjct: 211 RNKDLIEKGSDAQSSCTKPNMEAESGLVDNMQEFTQLKCAEACPSELKTQEFDIRL--GQ 268
Query: 255 KSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCN---VPVNSPRQVI 311
+ + A +A K T + +D + + H + EV + V +NS ++ I
Sbjct: 269 TLITQDSHAGALSMANHKNGETSTNNGKDVDDQEHFRIASTSGEVHDNHYVQINSTKEAI 328
Query: 312 DFMSAFNNH-----KPPSNNGASRFDSSPQLDLSLRRTHPDGFENQV-ERKFILRHSNAS 365
D + AF H K PS + + D+SPQLDLSLR +HP E ++ E + L HSNAS
Sbjct: 329 DLIGAFRTHPNCSLKKPSIDWTDKLDNSPQLDLSLRSSHPSNIEKELTEERNTLMHSNAS 388
Query: 366 AFTRYTNKPSEPQHSSLSGVCNQQKEFE 393
AF RYTN+ + + + +QQ+E +
Sbjct: 389 AFKRYTNRQLQASPAVVVNFSDQQREHQ 416
>gi|255928918|gb|ACU42266.1| pseudo response regulator 59 [Pisum sativum]
Length = 469
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/388 (52%), Positives = 265/388 (68%), Gaps = 14/388 (3%)
Query: 18 EGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN 77
+G+ +WE FL +M LRVLLVEADD TRQI+TALLRK +Y+V AV DGLKAWE+LKGRPRN
Sbjct: 6 KGLLRWEKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRN 65
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
DLILTEVDLPS+SG+ALL+L+MEH+ CK IPVIMMSSQDSVSTVYKCM+RGAADYLVKP
Sbjct: 66 FDLILTEVDLPSVSGYALLSLIMEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKP 125
Query: 138 VRRNELRNLWQHVWRRQSSMVSG---NETQDESVGQQKIEATSENDAASNHSSGYMACIQ 194
+R NELRNLWQHVWRRQS + N QDE QK+EAT+EN+AASN SSG ACIQ
Sbjct: 126 IRINELRNLWQHVWRRQSQSTATAGINGPQDEIDALQKVEATAENNAASNRSSGDAACIQ 185
Query: 195 SKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQ 254
+ IEKGSD QSSCTKP+ EAES V++M + ++ ++ +++K Q + R+ GQ
Sbjct: 186 RNKDLIEKGSDAQSSCTKPNMEAESGLVDNMQEFTQLKCAEACPSELKTQEFDIRL--GQ 243
Query: 255 KSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCN---VPVNSPRQVI 311
+ + A +A K T + +D + + H + EV + V +NS ++ I
Sbjct: 244 TLITQDSHAGALSMANHKNGETSTNNGKDVDDQEHFRIASTSGEVHDNHYVQINSTKEAI 303
Query: 312 DFMSAFNNH-----KPPSNNGASRFDSSPQLDLSLRRTHPDGFENQV-ERKFILRHSNAS 365
D + AF H K PS + + D+SPQLDLSLR +HP E ++ E + L HSNAS
Sbjct: 304 DLIGAFRTHPNCSLKKPSIDWTDKLDNSPQLDLSLRSSHPSNIEKELTEERNTLMHSNAS 363
Query: 366 AFTRYTNKPSEPQHSSLSGVCNQQKEFE 393
AF RYTN+ + + + +QQ+E +
Sbjct: 364 AFKRYTNRQLQASPAVVVNFSDQQREHQ 391
>gi|449497396|ref|XP_004160390.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/448 (49%), Positives = 274/448 (61%), Gaps = 30/448 (6%)
Query: 19 GIA-KWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN 77
GI KWE FL +M LRVLLVEADDSTRQI+TALLRK YRV AVPDGLKAWE+LK RPRN
Sbjct: 47 GIGIKWERFLPKMMLRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPRN 106
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
+DLIL EV+LPSISGFALLTL+M HE CKNIPVIMMSS+DS+STVYKCMM+GAADYLVKP
Sbjct: 107 VDLILAEVELPSISGFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKP 166
Query: 138 VRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKG 197
+RRNELRNLWQHVWRRQ+ S N D Q+K+E TSEN+ ASNHS+GY+A +Q
Sbjct: 167 LRRNELRNLWQHVWRRQA---SSNVRADI---QEKVEVTSENETASNHSTGYVAGVQRNN 220
Query: 198 EFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSL 257
+ IEKGSD QSSCTK DFE + E+ SRQ GK+ ND K Q E +N Q+
Sbjct: 221 KNIEKGSDTQSSCTKVDFEPGNKIQEN--SQSRQ--GKASPNDFKPQKDERHINLSQRLF 276
Query: 258 VPVTEAQGSEVAACKEANTRAHFDEDTELET--------------HRSDVILTSEVCNVP 303
+ E G +A NT LE H D+
Sbjct: 277 MHENETGG--LAMSCYVNTDLPITLSMGLEPINDGRSPNIASEAGHDKDLFANPSRDATA 334
Query: 304 VNSPRQVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQVERKFILRHSN 363
N R I + + P +N A+ F S+ LDLSLRR P+ FE + + L+HS+
Sbjct: 335 SNHAR--IKYPDNYQKSSPSNNFAANNFGSALHLDLSLRRCQPNDFEERAAGQATLKHSS 392
Query: 364 ASAFTRYTNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTAC-NSYTPAATLSTQRSV 422
ASAFTRYT +P + + S +C++QKE E++ + S T+ ++ P L +
Sbjct: 393 ASAFTRYTFRPLQSLQAKSSSICDEQKETESNPDHVGSMGATSTSDTINPTPNLQKSSTS 452
Query: 423 NSLATGHSKQSELAVSYPQQRPCPVPVS 450
+ T S QSE+A S + P+ VS
Sbjct: 453 MPMITSQSTQSEVAKSSTSETAIPLQVS 480
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 459 AMHKLDHKLDSLEDLGHISPATDQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQVTAGR 518
A K+++ S E+ GHISP TD SA+S+ C G + + S+GY S CGSNSN+D+V R
Sbjct: 554 ASRKIENSGQSPENQGHISPTTDHSANSNVCRGNTTHVGSLGYPSPCGSNSNVDRVGIAR 613
>gi|449456441|ref|XP_004145958.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/448 (49%), Positives = 274/448 (61%), Gaps = 30/448 (6%)
Query: 19 GIA-KWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN 77
GI KWE FL +M LRVLLVEADDSTRQI+TALLRK YRV AVPDGLKAWE+LK RPRN
Sbjct: 47 GIGIKWERFLPKMMLRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPRN 106
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
+DLIL EV+LPSISGFALLTL+M HE CKNIPVIMMSS+DS+STVYKCMM+GAADYLVKP
Sbjct: 107 VDLILAEVELPSISGFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKP 166
Query: 138 VRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKG 197
+RRNELRNLWQHVWRRQ+ S N D Q+K+E TSEN+ ASNHS+GY+A +Q
Sbjct: 167 LRRNELRNLWQHVWRRQA---SSNVRADI---QEKVEVTSENETASNHSTGYVAGVQRNN 220
Query: 198 EFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSL 257
+ IEKGSD QSSCTK DFE + E+ SRQ GK+ ND K Q E +N Q+
Sbjct: 221 KNIEKGSDTQSSCTKVDFEPGNKIQEN--SQSRQ--GKASPNDFKPQKDERHINLSQRLF 276
Query: 258 VPVTEAQGSEVAACKEANTRAHFDEDTELET--------------HRSDVILTSEVCNVP 303
+ E G +A NT LE H D+
Sbjct: 277 MHENETGG--LAMSCYVNTDLPITLSMGLEPINDGRSPNIASEAGHDKDLFANPSRDATA 334
Query: 304 VNSPRQVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQVERKFILRHSN 363
N R I + + P +N A+ F S+ LDLSLRR P+ FE + + L+HS+
Sbjct: 335 SNHAR--IKYPDNYQKSSPSNNFAANNFGSALHLDLSLRRCQPNDFEERAAGQATLKHSS 392
Query: 364 ASAFTRYTNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTAC-NSYTPAATLSTQRSV 422
ASAFTRYT +P + + S +C++QKE E++ + S T+ ++ P L +
Sbjct: 393 ASAFTRYTFRPLQSLQAKSSSICDEQKETESNPDHVGSMGATSTSDTINPTPNLQKSSTS 452
Query: 423 NSLATGHSKQSELAVSYPQQRPCPVPVS 450
+ T S QSE+A S + P+ VS
Sbjct: 453 MPMITSQSTQSEVAKSSTSETAIPLQVS 480
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 459 AMHKLDHKLDSLEDLGHISPATDQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQVTAGR 518
A K+++ S E+ GHISP TD SA+S+ G + + S+GY S CGSNSN+D+V R
Sbjct: 554 ASRKIENSGQSPENQGHISPTTDHSANSNVWRGNTTHVGSLGYPSPCGSNSNVDRVGIAR 613
>gi|225453624|ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 641
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 244/552 (44%), Positives = 324/552 (58%), Gaps = 62/552 (11%)
Query: 3 DVVLNDEE--LKEMNGNE-------GIAKWETFLQRMALRVLLVEADDSTRQIVTALLRK 53
+V L +EE ++EM G E G+ +W FL RM LRVLLVE DDSTRQI+ ALLRK
Sbjct: 13 EVELQEEEKRVREMEGKEEKEKSSSGVVRWGRFLPRMVLRVLLVEPDDSTRQIIAALLRK 72
Query: 54 SSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMM 113
SY+V AV DGLKAWE LKG P+N+DLILTEV+LPSISGFALL+L+ME +ICK IPVIMM
Sbjct: 73 CSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSISGFALLSLIMEDDICKKIPVIMM 132
Query: 114 SSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKI 173
SS DS+S V KCM++GAAD+LVKPVR+NELRNLWQHVWRR + SG+ +Q+ S+ Q K+
Sbjct: 133 SSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHVWRRHAP-TSGHVSQNLSIAQNKV 191
Query: 174 EATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLW 233
E +SEN+ ASNHSS Y+ Q K E EKGSD QSS T P EAESA++E+M S QL
Sbjct: 192 EVSSENNTASNHSSDYVVSAQKKKECSEKGSDVQSSSTTPYLEAESAYMENMQGFS-QLK 250
Query: 234 GKSLQN--DVKMQNHEARVNYGQK--SLVPVTEAQ----GSEVAACKEANTRAHFD-EDT 284
+S+ N + +++ HE + ++ L +T + GSEVA E A F E++
Sbjct: 251 CRSVSNLSNEEIRKHEDCIELDKEPDRLESLTGGKIITLGSEVAPGNEGYHSAAFRWEES 310
Query: 285 ELETHR---------------SDVILTSEVCNVPVNSPRQ-VIDFMSAFNNHKP------ 322
R +D+ + CN P ID +S F+N+
Sbjct: 311 HCRAKRVTSGDGVGPASHIENTDITGENHGCNEKWIEPSSGAIDLISTFDNYPKDRNQFS 370
Query: 323 PSNNGASRFDSSPQLDLSLRRTHPDGFENQ-VERKFILRHSNASAFTRYTNKPS-EPQHS 380
SN+G S+ +PQL+LSLRR P +N + + L HSN+SAF+ Y N S +P
Sbjct: 371 SSNDGISKDGFAPQLELSLRRFQPCSSKNHGSDERHTLNHSNSSAFSWYNNGKSLQPLFP 430
Query: 381 SLSGVCNQQKEFETDSEKNFSNIL---TACNSYTPAATLS-TQRSVNSLATGHSKQSELA 436
+ + C++ KE + S + N L T S A LS TQ ++ +L G S Q+
Sbjct: 431 TSAINCSELKEDASYSHERLFNQLPESTVGTSERCGAALSVTQGNMTTLVMGQSNQA--G 488
Query: 437 VSYPQQRPCPVPVSVKVNSTNQAMHKLDHKLDSLEDLGHISPATDQSASSSFCNGAVSRL 496
++P + +PV + N L+ +E+L H SP QSASSS CNG VS L
Sbjct: 489 AAFPTSQLGLIPVQGENN------------LEPMEELSHGSPVAGQSASSSLCNGVVSHL 536
Query: 497 NSMGYGSACGSN 508
+S +G C N
Sbjct: 537 SSSVHGGICNRN 548
>gi|296089013|emb|CBI38716.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 231/516 (44%), Positives = 305/516 (59%), Gaps = 53/516 (10%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M LRVLLVE DDSTRQI+ ALLRK SY+V AV DGLKAWE LKG P+N+DLILTEV+LPS
Sbjct: 1 MVLRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPS 60
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
ISGFALL+L+ME +ICK IPVIMMSS DS+S V KCM++GAAD+LVKPVR+NELRNLWQH
Sbjct: 61 ISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQH 120
Query: 150 VWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSS 209
VWRR + SG+ +Q+ S+ Q K+E +SEN+ ASNHSS Y+ Q K E EKGSD QSS
Sbjct: 121 VWRRHAP-TSGHVSQNLSIAQNKVEVSSENNTASNHSSDYVVSAQKKKECSEKGSDVQSS 179
Query: 210 CTKPDFEAESAHVEDMPDLSRQLWGKSLQN--DVKMQNHEARVNYGQK--SLVPVTEAQ- 264
T P EAESA++E+M S QL +S+ N + +++ HE + ++ L +T +
Sbjct: 180 STTPYLEAESAYMENMQGFS-QLKCRSVSNLSNEEIRKHEDCIELDKEPDRLESLTGGKI 238
Query: 265 ---GSEVAACKEANTRAHFD-EDTELETHR---------------SDVILTSEVCNVPVN 305
GSEVA E A F E++ R +D+ + CN
Sbjct: 239 ITLGSEVAPGNEGYHSAAFRWEESHCRAKRVTSGDGVGPASHIENTDITGENHGCNEKWI 298
Query: 306 SPRQ-VIDFMSAFNNHKP------PSNNGASRFDSSPQLDLSLRRTHPDGFENQ-VERKF 357
P ID +S F+N+ SN+G S+ +PQL+LSLRR P +N + +
Sbjct: 299 EPSSGAIDLISTFDNYPKDRNQFSSSNDGISKDGFAPQLELSLRRFQPCSSKNHGSDERH 358
Query: 358 ILRHSNASAFTRYTNKPS-EPQHSSLSGVCNQQKEFETDSEKNFSNIL---TACNSYTPA 413
L HSN+SAF+ Y N S +P + + C++ KE + S + N L T S
Sbjct: 359 TLNHSNSSAFSWYNNGKSLQPLFPTSAINCSELKEDASYSHERLFNQLPESTVGTSERCG 418
Query: 414 ATLS-TQRSVNSLATGHSKQSELAVSYPQQRPCPVPVSVKVNSTNQAMHKLDHKLDSLED 472
A LS TQ ++ +L G S Q+ ++P + +PV + N L+ +E+
Sbjct: 419 AALSVTQGNMTTLVMGQSNQA--GAAFPTSQLGLIPVQGENN------------LEPMEE 464
Query: 473 LGHISPATDQSASSSFCNGAVSRLNSMGYGSACGSN 508
L H SP QSASSS CNG VS L+S +G C N
Sbjct: 465 LSHGSPVAGQSASSSLCNGVVSHLSSSVHGGICNRN 500
>gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa]
Length = 700
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 210/460 (45%), Positives = 272/460 (59%), Gaps = 47/460 (10%)
Query: 29 RMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLP 88
R+ALR+LLVEADDSTRQI+ ALLRK SY+V AV DGLKAWE LKGRP NIDL+LTEV+LP
Sbjct: 36 RVALRILLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWETLKGRPHNIDLVLTEVELP 95
Query: 89 SISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
SISGFALLTL+MEH++CKNIPVIMMSS D+++TV KCM++GAAD+L+KPVR+NELRNLWQ
Sbjct: 96 SISGFALLTLIMEHDVCKNIPVIMMSSNDAITTVLKCMLKGAADFLIKPVRKNELRNLWQ 155
Query: 149 HVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDE-- 206
HVWRRQ+ G QKIEA+SEN+AASNHSS Q E EKGSD
Sbjct: 156 HVWRRQTLTGGGYVC-------QKIEASSENNAASNHSSDCYVYTQKNIECSEKGSDAQP 208
Query: 207 --QSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQ-NDVKMQNHEARVNYGQKSLVPVTEA 263
QSSCT P EAESA++++M LS+ G + ++ M H +S+ P +E
Sbjct: 209 LVQSSCTTPYLEAESAYMQNMQGLSQMKCGSTSNLSNSHMDRHGGCNKLDNESITPESEN 268
Query: 264 Q------GSEVAACKEANTRAHF-------------DEDTELETHRSDVILTSEV--CNV 302
+ GSEV EA+ +E E+ R + + SE+ CN
Sbjct: 269 EETSNRLGSEVVPFGEADDSTALRLKENACAKPMSQNEGAPAESKRGNANIASEIHGCND 328
Query: 303 PVNSPRQ-VIDFMSAFNNHKPP-------SNNGASRFDSSPQLDLSLRRTHPDGFENQ-V 353
+ P ID + F+NH ++ G S+ + P L+LSLRRT Q
Sbjct: 329 ELFEPSSGAIDLIGTFDNHNKCNAGNSNYTDGGTSKLEFDPHLELSLRRTCMSTSNYQGT 388
Query: 354 ERKFILRHSNASAFTRY-TNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTA-CNSYT 411
+ + +L HSN SAF+ Y + K +P LS C + KE +++ + SN L+ N
Sbjct: 389 DGRHMLNHSNGSAFSWYNSGKMLQPLLPILSSNCTKAKEDASEAHEPSSNELSGRTNGTF 448
Query: 412 PA--ATLS-TQRSVNSLATGHSKQSELAVSYPQQRPCPVP 448
P ATLS +Q ++ SL G S Q+EL Q PVP
Sbjct: 449 PQHDATLSNSQENITSLPIGQSGQAELQFPSHQLGMIPVP 488
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 455 STNQAMHKLD------HKLDSLEDLGHISPATDQSASSSFCNGAVSRLNSMGYGSA 504
+TN ++H+ D + L+ +E+ H S A Q+ +SS CNGAV +N + YG++
Sbjct: 555 TTNNSIHQADKAEHEENDLEPVEEHRHGSSAAGQTTTSSLCNGAVDHINGVAYGNS 610
>gi|224121124|ref|XP_002318502.1| pseudo response regulator [Populus trichocarpa]
gi|222859175|gb|EEE96722.1| pseudo response regulator [Populus trichocarpa]
Length = 529
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/192 (79%), Positives = 169/192 (88%), Gaps = 2/192 (1%)
Query: 17 NEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR 76
N+G+ +W+ FL RM LRVLLVEADDSTRQI+ ALLRK SYRV +VPDGLKAWE+LKGRP
Sbjct: 50 NDGLVRWDGFLPRMVLRVLLVEADDSTRQIIAALLRKCSYRVVSVPDGLKAWEILKGRPH 109
Query: 77 NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
IDLILTEVDLPSISG+ LLT++MEHEICKNIPVIMMSSQDS+STVYKCM+RGAADYLVK
Sbjct: 110 GIDLILTEVDLPSISGYPLLTIIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVK 169
Query: 137 PVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQ-S 195
P+R+NELRNLWQHVWRRQSS+ GN QDESVGQ KIEATSEN ASNH+SG MA IQ S
Sbjct: 170 PLRKNELRNLWQHVWRRQSSLAGGNGPQDESVGQDKIEATSENSPASNHASGEMASIQRS 229
Query: 196 KGEFIEKGSDEQ 207
KG+ EKGSD Q
Sbjct: 230 KGQ-TEKGSDAQ 240
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 290 RSDVILTSEVCNVPV---NSPRQVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLRRTHP 346
R+ + E C+ V NS R+ DFM A N NN FDSSP LDLSLRR+HP
Sbjct: 248 RTGAYVAIESCDNDVALANSHREAFDFMGASTNRSSSFNNVKINFDSSPHLDLSLRRSHP 307
Query: 347 DGFE-NQVERKFILRHSNASAFTRYTNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILT 405
GFE E + L HSNASAFT+Y N+P + HS+L N QKE T+ ++ S+ T
Sbjct: 308 SGFEIRDTEERRALWHSNASAFTQYINRPLQLPHSALESTGN-QKELGTNYDRKISS--T 364
Query: 406 ACNSYTPAATLSTQRSVNSLATGHSKQSELAVSYPQQRPCPVPVSVKVNSTNQAMHKLDH 465
NS + STQ+S SLA G +K+SE+A S P QR P+ + K N +
Sbjct: 365 GYNSDALSLAPSTQKSEISLAAGQTKESEIATSSPGQRVFPIQIPAKETRLNNLCNSYGS 424
Query: 466 KLDSL----EDLGHISPATDQSA 484
+ D G ISPATDQSA
Sbjct: 425 VFPPIFCKQSDRGLISPATDQSA 447
>gi|147776739|emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
Length = 991
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 220/525 (41%), Positives = 290/525 (55%), Gaps = 82/525 (15%)
Query: 3 DVVLNDEE--LKEMNGNE-------GIAKWETFLQRMALRVLLVEADDSTRQIVTALLRK 53
+V L +EE + EM G E G+ +W FL RM LRVLLVE DDSTRQI+ ALLRK
Sbjct: 13 EVELQEEEKRVXEMEGKEEKEKSSSGVVRWGRFLPRMVLRVLLVEPDDSTRQIIAALLRK 72
Query: 54 SSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMM 113
SY+V AV DGLKAWE LKG P+N+DLILTEV+LPSISGFALL+L+ME +ICK IPVIMM
Sbjct: 73 CSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSISGFALLSLIMEDDICKKIPVIMM 132
Query: 114 SSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKI 173
SS DS+S V KCM++GAAD+LVKPVR+NEL NLWQHVWRR + G+ +Q+ S+ Q K+
Sbjct: 133 SSHDSISMVLKCMLKGAADFLVKPVRKNELXNLWQHVWRRHAP-TXGHVSQNLSIAQNKV 191
Query: 174 EATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLW 233
E +S N+ ASNHSS Y+ Q K E EKGSD QSS T P EAESA++E+M S QL
Sbjct: 192 EVSSXNNTASNHSSDYVVSAQKKKECSEKGSDVQSSSTTPYLEAESAYMENMQGFS-QLK 250
Query: 234 GKSLQN--DVKMQNHE-----------------------------------ARVNYGQKS 256
+S+ N + +++ HE A + YG
Sbjct: 251 CRSVSNLSNEEIRKHEDCIELDKEPDRLESLTGGISNILLSFGFFEFLFYSATLIYGASD 310
Query: 257 LVPVTE---AQGSEVAACKEANTRAHFD-EDTELETHR---------------SDVILTS 297
+ V GSEVA E A F E++ R +D+ +
Sbjct: 311 KLLVAGKIITLGSEVAPGNEGYHSAAFRWEESHCRAKRVTSGDGVGPASHIENTDITGEN 370
Query: 298 EVCNVPVNSPRQ-VIDFMSAFNNHKP------PSNNGASRFDSSPQLDLSLRRTHPDGFE 350
CN P ID +S F+N+ SN+G S+ +PQL+LSLRR P +
Sbjct: 371 HGCNEKWIEPSSGAIDLISTFDNYPKDRNQFSSSNDGISKDGFAPQLELSLRRFQPCSSK 430
Query: 351 NQ-VERKFILRHSNASAFTRYTNKPS-EPQHSSLSGVCNQQKEFETDSEKNFSNIL---T 405
N + + L HSN+SAF+ Y N S +P + + C++ KE + S + N L T
Sbjct: 431 NHGSDERHTLNHSNSSAFSWYNNGKSLQPLFPTSAINCSELKEDASYSHERLFNQLPEST 490
Query: 406 ACNSYTPAATLS-TQRSVNSLATGHSKQSELAVSYPQQRPCPVPV 449
S A LS TQ ++ +L G S Q+ ++P + +PV
Sbjct: 491 VGTSERCGAALSVTQGNMTTLVMGQSNQA--GAAFPTSQLGLIPV 533
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 451 VKVNSTNQAMHKLDHKLDSLEDLGHISPATDQSASSSFCNGAVSRLNSMGYGSACGSN 508
+ NST+Q +H+ ++ L+ +E+L H SP QSASSS CNG VS L+S +G C N
Sbjct: 596 LTFNSTDQTVHEQENNLEPMEELSHGSPVAGQSASSSLCNGVVSHLSSSVHGGICNRN 653
>gi|52783225|sp|Q6LA42.2|APRR5_ARATH RecName: Full=Two-component response regulator-like APRR5; AltName:
Full=Pseudo-response regulator 5
gi|9758535|dbj|BAB08930.1| unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5 protein [Arabidopsis thaliana]
gi|23506027|gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana]
Length = 558
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 209/539 (38%), Positives = 285/539 (52%), Gaps = 111/539 (20%)
Query: 12 KEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL 71
K+ G +G+ KWE FL ++ALRVLLVEADDSTRQI+ ALLRK SYRV AVPDGLKAWE+L
Sbjct: 30 KKDAGVDGLVKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEML 89
Query: 72 KGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAA 131
KG+P ++DLILTEVDLPSISG+ALLTL+MEH+ICKNIPVIMMS+QDSV+TVYKCM++GAA
Sbjct: 90 KGKPESVDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAA 149
Query: 132 DYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMA 191
DYLVKP+RRNELRNLWQHVWRRQ+S+ + +ESVGQQK E S N++ ++
Sbjct: 150 DYLVKPLRRNELRNLWQHVWRRQTSLAPDSFPWNESVGQQKAEGASANNSNGKRDDHVVS 209
Query: 192 CIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVN 251
G D QSSCT+P+ E ESA VE S ++ V+M+ +++ N
Sbjct: 210 G---------NGGDAQSSCTRPEMEGESADVE-----------VSARDAVQMECAKSQFN 249
Query: 252 YGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVI 311
++ + E Q + A I
Sbjct: 250 ---ETRLLANELQSKQAEA----------------------------------------I 266
Query: 312 DFMSAFNNHKPPSNN--GASRFDSSPQLDLSLRRTHPDGFENQVE-RKFILRHSNASAFT 368
DFM A N ++++S +LDLSLRR P+ ENQ + L S+ASAFT
Sbjct: 267 DFMGASFRRTGRRNREESVAQYESRIELDLSLRR--PNASENQSSGDRPSLHPSSASAFT 324
Query: 369 RYTNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSLATG 428
RY ++P + Q S+ V +Q+K + N ++ N+ P + +R+ S TG
Sbjct: 325 RYVHRPLQTQCSASPVVTDQRKNVAASQDDNIV-LMNQYNTSEPPPN-APRRNDTSFYTG 382
Query: 429 HSKQ----SELAVSYPQQ--RPCPVPV-SVKVNSTNQA---------------------- 459
S S+P Q P P P+ +++ N A
Sbjct: 383 ADSPGPPFSNQLNSWPGQSSYPTPTPINNIQFRDPNTAYTSAMAPASLSPSPSSVSPHEY 442
Query: 460 ---MHKLDHKLDSLEDLG---------HISPATDQSASSSFCNGAVSRLNSMGYGSACG 506
H + K + L+D ++S AT+ SA + + + + N GY + G
Sbjct: 443 SSMFHPFNSKPEGLQDRDCSMDVDERRYVSSATEHSAIGNHIDQLIEKKNEDGYSLSVG 501
>gi|18420797|ref|NP_568446.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
gi|10281006|dbj|BAB13743.1| pseudo-response regulator 5 [Arabidopsis thaliana]
gi|332005931|gb|AED93314.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
Length = 667
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 209/539 (38%), Positives = 285/539 (52%), Gaps = 111/539 (20%)
Query: 12 KEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL 71
K+ G +G+ KWE FL ++ALRVLLVEADDSTRQI+ ALLRK SYRV AVPDGLKAWE+L
Sbjct: 139 KKDAGVDGLVKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEML 198
Query: 72 KGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAA 131
KG+P ++DLILTEVDLPSISG+ALLTL+MEH+ICKNIPVIMMS+QDSV+TVYKCM++GAA
Sbjct: 199 KGKPESVDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAA 258
Query: 132 DYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMA 191
DYLVKP+RRNELRNLWQHVWRRQ+S+ + +ESVGQQK E S N++ ++
Sbjct: 259 DYLVKPLRRNELRNLWQHVWRRQTSLAPDSFPWNESVGQQKAEGASANNSNGKRDDHVVS 318
Query: 192 CIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVN 251
G D QSSCT+P+ E ESA VE S ++ V+M+ +++ N
Sbjct: 319 G---------NGGDAQSSCTRPEMEGESADVE-----------VSARDAVQMECAKSQFN 358
Query: 252 YGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVI 311
++ + E Q + A I
Sbjct: 359 ---ETRLLANELQSKQAEA----------------------------------------I 375
Query: 312 DFMSAFNNHKPPSNN--GASRFDSSPQLDLSLRRTHPDGFENQVE-RKFILRHSNASAFT 368
DFM A N ++++S +LDLSLRR P+ ENQ + L S+ASAFT
Sbjct: 376 DFMGASFRRTGRRNREESVAQYESRIELDLSLRR--PNASENQSSGDRPSLHPSSASAFT 433
Query: 369 RYTNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSLATG 428
RY ++P + Q S+ V +Q+K + N ++ N+ P + +R+ S TG
Sbjct: 434 RYVHRPLQTQCSASPVVTDQRKNVAASQDDNIV-LMNQYNTSEPPPN-APRRNDTSFYTG 491
Query: 429 HSKQ----SELAVSYPQQ--RPCPVPV-SVKVNSTNQA---------------------- 459
S S+P Q P P P+ +++ N A
Sbjct: 492 ADSPGPPFSNQLNSWPGQSSYPTPTPINNIQFRDPNTAYTSAMAPASLSPSPSSVSPHEY 551
Query: 460 ---MHKLDHKLDSLEDLG---------HISPATDQSASSSFCNGAVSRLNSMGYGSACG 506
H + K + L+D ++S AT+ SA + + + + N GY + G
Sbjct: 552 SSMFHPFNSKPEGLQDRDCSMDVDERRYVSSATEHSAIGNHIDQLIEKKNEDGYSLSVG 610
>gi|224064372|ref|XP_002301443.1| pseudo response regulator [Populus trichocarpa]
gi|222843169|gb|EEE80716.1| pseudo response regulator [Populus trichocarpa]
Length = 694
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 222/611 (36%), Positives = 320/611 (52%), Gaps = 102/611 (16%)
Query: 2 GDVVLNDEELKEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAV 61
G +V+ E K+ G+ + +WE FL +M LRVLLVEADDSTRQI+ ALLRK YRV+AV
Sbjct: 14 GGMVVELETEKKDIGSSEVVRWEKFLPKMVLRVLLVEADDSTRQIIVALLRKCGYRVSAV 73
Query: 62 PDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVST 121
PDGL AWE LK RP +IDLILTEV+LP ISG+A L LVMEH++CKNIPVIMMSS DS+S
Sbjct: 74 PDGLMAWETLKERPHSIDLILTEVELPLISGYAFLALVMEHDVCKNIPVIMMSSHDSISV 133
Query: 122 VYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDA 181
V KCM++G+AD+LVKPVR+NELRNLWQHVWRRQ + +G ++ + ++EA+SEN+A
Sbjct: 134 VLKCMLKGSADFLVKPVRKNELRNLWQHVWRRQ-TQTAGKIPRNSN----RVEASSENNA 188
Query: 182 ASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDV 241
A SS + +Q + EKGSD QSSCT P EAESAH++++ LS L +S N +
Sbjct: 189 A---SSDFATSLQKNKDCSEKGSDAQSSCTTPCLEAESAHMQNIQGLS-YLKYRSASN-L 243
Query: 242 KMQNHEARVNYGQKSLVPVTEAQGSEVAACKEAN-TR----------------------- 277
++E +Y + + PV + V + +N TR
Sbjct: 244 SDADNEKYEDYAKLNKSPVNPESKTGVFVAERSNRTRPDREPYHGAYNPTASRLVEEHAC 303
Query: 278 ---AHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPS------NNGA 328
A DE++ E R + +V + ID + +FNN + ++
Sbjct: 304 AKSAIHDENSRPENDREHANSSFGHDDVLAETSSGAIDLIGSFNNQPKHTYAYSSLHDAT 363
Query: 329 SRFDSSPQLDLSLRRTHPDGFENQ-VERKFILRHSNASAFTRYTNKPSEPQHSSLSGVCN 387
++F+ P L+LSLRR +P +NQ ++ + L HSN+SAF+ Y +K + + + +
Sbjct: 364 NKFEFPPLLELSLRRLYPSSSKNQGLDERHALNHSNSSAFSLYNSKTLQSLFPTSASNGS 423
Query: 388 QQKEFETDSEKNFSNIL---TACNSYTPAATLS-TQRSVNSLATGHSKQSELAVSYPQ-- 441
KE + S SN L S A+LS Q + + G S + ELA PQ
Sbjct: 424 DSKEEASKSPDPSSNQLAQNVGTLSQIHDASLSGNQEIITTPVIGQSGKVELAHPSPQLG 483
Query: 442 --------------------------------------QRPCPVPVSVKVNSTNQAMH-K 462
++ P P + V+S + + K
Sbjct: 484 LIPVLGTRLDNISTGCGHVFSPLCYTQSNAAWNPNLAGRQQSPFPTTASVHSNPEVLDSK 543
Query: 463 LDHKL------------DSLEDLGHISPATDQSASSSFCNGAVSRLNSMGYGSACGSNSN 510
+HK + ++++ H SPA QS SSS CN + +S Y S GS ++
Sbjct: 544 QNHKCYVDQNDLQQNNREPVDEMRHDSPAAGQSTSSSLCNRVANNNSSSAYES-FGSGND 602
Query: 511 LDQVTAGRAKQ 521
++ + G A++
Sbjct: 603 VNASSVGTAEK 613
>gi|224128053|ref|XP_002320232.1| pseudo response regulator [Populus trichocarpa]
gi|222861005|gb|EEE98547.1| pseudo response regulator [Populus trichocarpa]
Length = 717
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 208/508 (40%), Positives = 280/508 (55%), Gaps = 73/508 (14%)
Query: 2 GDVVLNDEELKEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAV 61
G V + E K++ +E + +WE FL RM L VLLVEADDSTRQI+ ALLRK SYRV AV
Sbjct: 15 GMAVELETEKKDIGSSE-VVRWEKFLPRMVLSVLLVEADDSTRQIIAALLRKCSYRVAAV 73
Query: 62 PDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVST 121
PDGL AWE LKG P NIDLILTEV+LP ISG+ALLTLV EH +CKNIPVIMMSSQDS+S
Sbjct: 74 PDGLMAWETLKGGPHNIDLILTEVELPLISGYALLTLVTEHAVCKNIPVIMMSSQDSISM 133
Query: 122 VYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDA 181
V KCM++GAAD+L+KPVR+NELRNLWQHVWRRQ ++ +G Q+ K+EA+SE +A
Sbjct: 134 VLKCMLKGAADFLIKPVRKNELRNLWQHVWRRQ-TLSAGQIPQN----LHKVEASSEINA 188
Query: 182 ASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLW--GKSLQN 239
ASN SS + + + EKG D QSSCT P EAESAH+++M LS+ + +L N
Sbjct: 189 ASNGSSDSVMSSRKNKDCSEKGCDAQSSCTTPCLEAESAHMQNMQGLSQMKYRSASNLSN 248
Query: 240 DVKMQNHEA--------------------RVNYGQKSLVPVTEAQGS------EVAACKE 273
+ + E R N + P + A E AC +
Sbjct: 249 TDREEFEECAKLDKSPVTPENKTGVFVPERPNRMESDGEPCSGAYNPTSLRLLEEHACAK 308
Query: 274 ANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPS------NNG 327
+ + DE++ E R + +VP S ID + NN + + G
Sbjct: 309 SAIQ---DENSRPENDRGLANSSFGCDDVPFESSSGAIDLIGTLNNGPKTTYVHSSLHYG 365
Query: 328 ASRFDSSPQLDLSLRRTHPDGFENQ-VERKFILRHSNASAFT------------------ 368
++F+ +PQL+LSL+R +P +NQ V+ + L HS+ASAF+
Sbjct: 366 TNKFEFAPQLELSLKRLYPSSSKNQGVDERHALNHSHASAFSWKKQGCWDSGRDGIGGSD 425
Query: 369 --RYTNKPSEPQHSSLSGVCNQQKEF-----ETDSEKNFSNILTACNSYTPAATLSTQRS 421
RY +K +P + + + KE E S ++ NI + + ATLS +
Sbjct: 426 FRRYNSKTLQPPFPASASNGSDSKEEASKSPELSSNQHAQNINSISQRH--GATLSGNQD 483
Query: 422 VNSLATGHSKQSELAVSYPQQRPCPVPV 449
+ G S ++ELA YP R +PV
Sbjct: 484 MTIPIIGQSGKAELA--YPSPRHGLIPV 509
>gi|297812633|ref|XP_002874200.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
gi|297320037|gb|EFH50459.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
Length = 556
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 206/534 (38%), Positives = 284/534 (53%), Gaps = 114/534 (21%)
Query: 16 GNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRP 75
G +G+ KWE FL ++ALRVLLVEADDSTRQI++ALLRK SYRV AVPDGLKAWE+LKG+P
Sbjct: 36 GGDGLVKWERFLPKIALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGKP 95
Query: 76 RNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++DLILTEVDLPSISG+ALLTL+MEH+ICKNIPVI S DSV+TVYKCM++GAADYLV
Sbjct: 96 ESVDLILTEVDLPSISGYALLTLIMEHDICKNIPVI---STDSVNTVYKCMLKGAADYLV 152
Query: 136 KPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQS 195
KP+RRNELRNLWQHVWRRQ+S+ + DE QQK E A++N+S+G +
Sbjct: 153 KPLRRNELRNLWQHVWRRQTSLAPDSFPLDER--QQKPEG-----ASANNSNGK----RE 201
Query: 196 KGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQK 255
+ I G D QSSCT+P+ E ESA VE + ++ V+M+
Sbjct: 202 EHVVIGNGGDAQSSCTRPEMEGESADVE-----------VNARDAVQME----------- 239
Query: 256 SLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMS 315
C ++ F+E T + N NS ++ ID M
Sbjct: 240 ---------------C----AKSQFNE-------------TRLLANEMQNSSKKAIDLMG 267
Query: 316 AFNNHKPPSNN--GASRFDSSPQLDLSLRRTHPDGFENQVERKFILRHSNASAFTRYTNK 373
A N A++++S +LDLSL R P ++ +R L S+ASAFTRY ++
Sbjct: 268 ASFRRTGQRNREESAAQYESRIELDLSLSRPIPSENQSSGDRP-SLHPSSASAFTRYVHR 326
Query: 374 PSEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSLATGHSKQ- 432
P + Q S+ V +Q+K F + N ++ N+ P + + +R+ S TG
Sbjct: 327 PLQTQCSASPVVPDQRKNFAASQDDNIV-LINQYNTSEPPPS-APRRNDTSFYTGADSPG 384
Query: 433 ---SELAVSYPQQ--RPCPVPV-SVKVNSTNQA-------------------------MH 461
S S+P Q P P P+ +++ N A H
Sbjct: 385 PPFSNQMNSWPGQGSYPTPTPINNIQFRGPNTAYASAMAPASVSPTPSSVSPHEYSSMFH 444
Query: 462 KLDHKLDSLEDLG---------HISPATDQSASSSFCNGAVSRLNSMGYGSACG 506
+ K + +D ++S AT+ SA + + + + N GY S+ G
Sbjct: 445 PFNGKPEGFQDRDGSMDVEERRYVSSATEHSAIGNHIDQLIEKKNEDGYSSSVG 498
>gi|356504197|ref|XP_003520885.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 703
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 189/423 (44%), Positives = 246/423 (58%), Gaps = 58/423 (13%)
Query: 12 KEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL 71
+E + N +WE FL RM LRVLLVEADDSTRQI++ALL K SY+V A DGLKAWE L
Sbjct: 15 EEQSDNASAVQWERFLPRMVLRVLLVEADDSTRQIISALLHKCSYKVVAFCDGLKAWETL 74
Query: 72 KGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAA 131
K +P +IDLILTEVDLPSISGF+LLTL+MEH+ICKNIPVIMMSS DSVS V KCM++GAA
Sbjct: 75 KNKPSDIDLILTEVDLPSISGFSLLTLIMEHDICKNIPVIMMSSHDSVSMVLKCMLKGAA 134
Query: 132 DYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMA 191
D+L+KPVRRNELRNLWQHVWRR + V Q+ ++ + +I +EN AASN SSG +A
Sbjct: 135 DFLIKPVRRNELRNLWQHVWRRHA--VCHMPPQNFTLPEIEIGFAAENHAASNDSSGSVA 192
Query: 192 CIQSKGEFIEKGSDE----------QSSCTKPDFEAESAHVEDMPDLSRQLWGKSL---- 237
GE EK S+ QS+CT P EAES ++E+M D+S+ +L
Sbjct: 193 STAKNGECSEKTSEAQKLHVLPTPVQSTCTSPFLEAESTYLENMQDISQLKRSSNLSNID 252
Query: 238 ----QNDVKMQNHEARVN--YGQKSLVPVTEAQGSEVAACKEA--NTRAHFDEDTE-LET 288
+N K + + N G+KSL SE + C + T + E ET
Sbjct: 253 TVKHENSTKCERESDKHNDEAGEKSLFV------SEDSRCNKTFKPTGLRLGQGYECCET 306
Query: 289 HRSDVILTSEV-------------CNVPVNSPRQ-VIDFMSAFNNHKPPSNNGAS----- 329
DV+L E+ C+ + P ID ++ F N ++ S
Sbjct: 307 RNQDVVLKIELIKSNPEINTDIHGCSDELVDPYTGAIDLIATFKNLPKSTDEKCSFSSGN 366
Query: 330 --RFDSSPQLDLSLRRTHPDGFENQV--ERKFILRHSNASAFTRYTN----KPSEPQHSS 381
+FD QL+LSLRR G + E + +L HSNASAF+RY++ +P P S+
Sbjct: 367 TAKFDFDTQLELSLRRRDFPGSSCKAASEERQLLNHSNASAFSRYSSSKLLQPLFPTPST 426
Query: 382 LSG 384
+S
Sbjct: 427 ISA 429
>gi|356520225|ref|XP_003528764.1| PREDICTED: two-component response regulator-like PRR95-like isoform
1 [Glycine max]
Length = 703
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 222/627 (35%), Positives = 297/627 (47%), Gaps = 134/627 (21%)
Query: 15 NGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGR 74
N N + +WE FL RM LRVLLVEAD STRQI+ ALLRK SY V AVPDGLKAWE LK +
Sbjct: 12 NSNAEVVRWERFLPRMVLRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKK 71
Query: 75 PRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYL 134
+DLILTEV+LP+ISGFALL+L+MEH+ICKNIPVIMMSS DSVS KCM++GA D+L
Sbjct: 72 APELDLILTEVELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFL 131
Query: 135 VKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQ 194
+KP+R+NELRNLWQHVWRR + TQ+ + +K++ SE+++ASN SSG +A +
Sbjct: 132 IKPIRKNELRNLWQHVWRRHA---ISTPTQNTTFSPKKLKTASEDNSASNKSSGSVASSK 188
Query: 195 SKGEFIEKGSDE----------------QSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQ 238
E E+ S+ QS+CT P FEA+S +VE+M D+ S
Sbjct: 189 KNNECSERLSEAQDVPQYVHCQVMQTLVQSTCTSPIFEAKSTYVENMQDVPP--LKSSKL 246
Query: 239 NDVKMQNHEARVNYGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTEL-----------E 287
N + M HE + ++S E + V +A E TEL E
Sbjct: 247 NKIDMVKHEKFAQFERESAEHNDETEDKSVTIVSDAARCDKTSELTELRPEQDCGVAEPE 306
Query: 288 THRSDVILTSEV------------CNVPVNSP-RQVIDFMSAFNN-----HKPPSNNGA- 328
T D IL SE+ C+ P + ID ++ N + S NG
Sbjct: 307 TENEDEILKSELDGDNSHVSMMQGCSAERVKPSKGAIDLIATVGNLPKHLDENCSLNGGN 366
Query: 329 -SRFDSSPQLDLSLRRTHPDGFENQ----VERKFILRHSNASAFTRYTN-KPSEPQHSS- 381
++FD QL+LSLR P NQ E L HSN SAF+ Y+N K +P S+
Sbjct: 367 TTKFDCETQLELSLRSDFPGSSGNQASEATEESQRLNHSNTSAFSWYSNSKLLQPHFSTP 426
Query: 382 -------------------LSGVCNQQKEFETDSEKNFSNIL----------------TA 406
LSG+ + ++ S +N N++ +
Sbjct: 427 SITFPEVNNLSWDSHESHKLSGITSGNCQY-GGSNQNLENMIGTVICQYGQVTPKLSNSQ 485
Query: 407 CNSYTPAATLSTQRS------VNSLATGHSKQSELAVSYP--QQRPCPVPVSVKVNSTNQ 458
C + +S +S SL S ++ P Q P P S S +
Sbjct: 486 CGLLPVSGVISNLKSEGHGNVFTSLFYAQSGIHPMSSPKPVCQNESSPFPTSTSTQSYPE 545
Query: 459 AMHKLDHKLDSLEDLG--------------------HISPATDQSASSSFCNGAVSRLNS 498
+ H D L D H SP DQSA +S C+ A + +NS
Sbjct: 546 S-----HNSDQLHDCSNDATCLNQNVKDNTDSDHARHDSPVADQSAGNSLCHDAANHVNS 600
Query: 499 MGYGSACGSNSNLDQVTAGRAKQLLIS 525
YGS +D G A ++S
Sbjct: 601 SAYGS-------MDSGNDGNATSAIVS 620
>gi|281308394|gb|ADA58345.1| pseudo-response regulator 5b [Brassica rapa]
Length = 628
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/224 (64%), Positives = 178/224 (79%), Gaps = 10/224 (4%)
Query: 16 GNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRV-------TAVPDGLKAW 68
G +G+ WE FL +++LRVLLVEADDSTRQI++ALLRK SYRV AVPDGLKAW
Sbjct: 96 GGDGLVTWERFLPKISLRVLLVEADDSTRQIISALLRKCSYRVFPFHFSVAAVPDGLKAW 155
Query: 69 EVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMR 128
E+L+G+P ++DLILTEVDLPSISG+ALLTL+MEH++CKNIPVIMMS+QDSV+TVYKCM++
Sbjct: 156 EMLRGKPESVDLILTEVDLPSISGYALLTLIMEHDLCKNIPVIMMSTQDSVNTVYKCMLK 215
Query: 129 GAADYLVKPVRRNELRNLWQHVWRRQSSMVSG-NETQDESVGQQKIEATSENDAASNHSS 187
GAADYLVKP+RRNELRNLWQHVWRRQSS+ G N DES+GQQK E S N++ SN +
Sbjct: 216 GAADYLVKPLRRNELRNLWQHVWRRQSSLAPGSNFPVDESLGQQKPEGASANNSTSNQVN 275
Query: 188 GYMACIQSK-GEFIEKGSDEQSSCTKPDFEAESAH-VEDMPDLS 229
G+ Q G G D+QSSC++P+ + ESA VED+P +S
Sbjct: 276 GFQREEQPVIGNGGGGGGDDQSSCSRPEMQGESADVVEDIPRVS 319
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 13/109 (11%)
Query: 285 ELETHRSDVILTSEVCNVPVNSPRQVIDFMSA--FNNHKPPSNNGASRFDSSP-QLDLSL 341
E++ +DV V ++P S ++ IDFM A N + ++ D+S +LDLSL
Sbjct: 303 EMQGESADV-----VEDIPRVSSKEAIDFMGASFRRNGQSHREESVAKHDTSRIELDLSL 357
Query: 342 RRTHPDGFENQVERKFILRHSNASAFTRYTNKPSEPQHSSLSGVCNQQK 390
RR PD EN + L S+ASAFTRY ++P + Q S V +Q+K
Sbjct: 358 RR--PDTSENH---QPSLHPSSASAFTRYVHRPLQTQCSVSPLVTDQRK 401
>gi|356571269|ref|XP_003553801.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 695
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 179/416 (43%), Positives = 242/416 (58%), Gaps = 48/416 (11%)
Query: 13 EMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK 72
E + N WE FL RM LRVLLVEADDSTRQI+ ALLRK Y+V A DGLKAWE LK
Sbjct: 14 EQSNNASAVHWERFLPRMVLRVLLVEADDSTRQIIAALLRKCGYKVVAFCDGLKAWETLK 73
Query: 73 GRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAAD 132
+ ++DLILTEVDLPSISGF+LLTL+MEH+ICKNIPVIMMSS DSVS V+KCM++GAAD
Sbjct: 74 NKAFDLDLILTEVDLPSISGFSLLTLIMEHDICKNIPVIMMSSHDSVSMVFKCMLKGAAD 133
Query: 133 YLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMAC 192
+L+KPVR+NELRNLWQHVWRR + Q+ ++ + ++ +EN AASN SSG +A
Sbjct: 134 FLIKPVRKNELRNLWQHVWRRHA---ISRPPQNLTLPEIELGFAAENHAASNDSSGSVAS 190
Query: 193 IQSKGEFIEKGSDE----------QSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVK 242
E EK S+ QS+C P EAES ++E+M D+ QL S +++
Sbjct: 191 TPKDDECSEKTSEAHKLHVLPTPVQSTCPSPFLEAESTYMENMQDI-LQLKSSSNLSNID 249
Query: 243 MQNHEARVN-----------YGQKSLVPVTEAQ--------GSEVAACKEANTRAHFDED 283
HE G+KSL + +A+ G + E + + DE
Sbjct: 250 TVKHENSTKCERESDKHNDEAGEKSLFILEDARCNKTFKPTGLRLGQSYECHETRNQDEV 309
Query: 284 TELETHRSDVILTSEV--CNVPVNSPRQ-VIDFMSAFNNHKPPSNNGAS-------RFDS 333
+E +S+ + +++ C+ + P ID ++ F N ++ S +FD
Sbjct: 310 LRIELIKSNPEINTDIHRCSDELVDPSTGAIDLIATFKNLPKSTDEKCSFSSGNTAKFDF 369
Query: 334 SPQLDLSLRRTHP-DGFENQVERKFILRHSNASAFTRYTN----KPSEPQHSSLSG 384
QL+LSLRR P + + + IL HSNASAF+RY+N +P P S++S
Sbjct: 370 DTQLELSLRRDFPGSSCKAAFKERQILNHSNASAFSRYSNSKLLQPLFPTPSTISA 425
>gi|255548045|ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223545559|gb|EEF47063.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 697
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 224/609 (36%), Positives = 300/609 (49%), Gaps = 143/609 (23%)
Query: 8 DEELKEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKA 67
D+E ++ G+ + +WE FL M LRVLLVEAD STRQI++ALLRK SYRV AVPDGL A
Sbjct: 17 DKEREKKEGSSEVVRWEKFLPNMVLRVLLVEADYSTRQIISALLRKCSYRVAAVPDGLMA 76
Query: 68 WEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMM 127
WE LK P NIDLILTEVDLP ISG+ALLTLVMEH+ CKNIPVIMMSS DS+S V KCM+
Sbjct: 77 WETLKDGPNNIDLILTEVDLPLISGYALLTLVMEHDFCKNIPVIMMSSHDSISKVLKCML 136
Query: 128 RGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSEND------A 181
+GAAD+L+KPVRRNEL+NLWQHVWRRQ ++ +GN + Q ++EA S A
Sbjct: 137 KGAADFLIKPVRRNELKNLWQHVWRRQ-TLTAGNIPPNSPNAQHRVEAASSASDHSSDCA 195
Query: 182 ASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLW-------- 233
S+H + E KGSD Q S +P + S ++ ++ ++L+
Sbjct: 196 TSSH---------KRKECSNKGSDAQGS--QPKCRSSS----NLSNMEKELYEDVTLDKK 240
Query: 234 --------GKSLQNDVKMQNHEARVNYGQKSLVPV----TEAQGSEVAACKEAN--TRAH 279
G SL N V + V L PV EA V +E + T+ +
Sbjct: 241 SAIPESKTGASLSNRVSQMVY---VTEWSTRLQPVDATCNEAHNPTVLKLEEEHDFTKIN 297
Query: 280 F-DEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPS------NNGASRFD 332
DE + E RS+ T + + S VID + F+N + N+ A++ +
Sbjct: 298 IQDERAQPENDRSNASTTQLHNDKHIRSSAGVIDLIGTFDNGPKRTCGDISINDSANKSE 357
Query: 333 SSPQLDLSLRRTHPDGFENQ-VERKFILRHSNASAFTRYTN----KPSEPQHSSLSGVCN 387
QL+LSLRR P+ +NQ VE + L HSNASAF+RY++ +P P +S
Sbjct: 358 FPSQLELSLRRFFPNSLKNQVVEERRALNHSNASAFSRYSSSKILQPLFPTSTS------ 411
Query: 388 QQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVN---------SLATGHSKQSELAVS 438
EF+ DS K S L++ A ++S Q+ N +L G S + ELA
Sbjct: 412 NYTEFKEDSSK--SPELSSNQISQNANSVSQQQGSNPNGSQDIITNLVIGQSGKCELA-- 467
Query: 439 YP-------------------------------------------QQRPCPVPVSVKVNS 455
YP Q+ P P+S ++S
Sbjct: 468 YPDSQKLIAVSGLRLENICNGYGHVFSPLYYAQTGLPSSSPKLASQREQSPFPISTSIHS 527
Query: 456 ---------------------TNQAMHKLDHKLDSLEDLGHISPATDQSASSSFCNGAVS 494
Q MH+ ++ ++ E+L H SPA QS SS CN
Sbjct: 528 NPEIQDSEGNNRQSAETATAPVEQNMHQQNN-MEHPEELKHGSPAAGQSTGSSMCNSFAD 586
Query: 495 RLNSMGYGS 503
NS YGS
Sbjct: 587 HNNSSAYGS 595
>gi|356559647|ref|XP_003548110.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 706
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 219/627 (34%), Positives = 297/627 (47%), Gaps = 134/627 (21%)
Query: 15 NGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGR 74
N N + +WE FL RM LRVLLVEAD STRQI+ ALLRK + AVPDGLKAWE LK +
Sbjct: 15 NSNAELVQWERFLPRMVLRVLLVEADHSTRQIIAALLRKC---IIAVPDGLKAWETLKKK 71
Query: 75 PRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYL 134
+DLILTEV+LP+ISGFALL+L+MEH+ICK+IPVIMMSS DSV+ KCM+ GA D+L
Sbjct: 72 ASELDLILTEVELPAISGFALLSLIMEHDICKSIPVIMMSSHDSVNMALKCMLNGAVDFL 131
Query: 135 VKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQ 194
+KP+R+NELRNLWQHVWRR + + TQ+ + +K++ SE+++ASN S+G +A +
Sbjct: 132 IKPIRKNELRNLWQHVWRRHTIITP---TQNTTFSPKKLKTASEDNSASNKSNGSVASSK 188
Query: 195 SKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQ---------------- 238
E E+ S+ QS+CT P EA S ++E+M D+S+ + + +Q
Sbjct: 189 KNNECSERLSEAQSTCTSPIMEAASTYMENMQDVSQDVHCQVMQTHVQSTCASPIFEAES 248
Query: 239 -----------------NDVKMQNHEARVNYGQKSLVPVTEAQG------SEVAACKEAN 275
N + M +HE + +KS E + SE A C ++
Sbjct: 249 TFVENMQDVPQLESSKLNKIDMVDHEKFAKFERKSAKHNDETEDKSITIVSEAARCDKSF 308
Query: 276 --TRAHFDED---TELETHRSDVILTSEV------------CNVPVNSP-RQVIDFMSAF 317
T ++D E ET D IL SE+ CN P + ID ++ F
Sbjct: 309 ELTDLMLEQDCGVAEPETENEDEILKSELGRDNSHVSILHGCNAEQVKPSKGAIDLIATF 368
Query: 318 NN-HKPPSNN------GASRFDSSPQLDLSLRRTHPDGFENQ----VERKFILRHSNASA 366
N K P+ N ++FD QL+LSLR P Q E L HSN SA
Sbjct: 369 GNLPKHPNENCSLNGGNTTKFDCETQLELSLRSDFPGSSGKQASESTEESQRLNHSNTSA 428
Query: 367 FTRYTNKP------SEPQHSS---------------LSGVCNQQKEFETDSEKNFSNIL- 404
F+ Y+N S P +S LSG C DS +N N++
Sbjct: 429 FSWYSNSKLLQPLFSPPSITSPKVNWLNWDSHECLKLSGNCQYD-----DSNQNLENMIS 483
Query: 405 TACNSYTPAATLSTQRSVNSLATGHSKQSELAVS---YPQQRPCPV-------PVSVKVN 454
T Y + S GH S +P P PV + +
Sbjct: 484 TVIGQYGLLPVSGVISKLKSEGHGHVFTSVFYAQSGIHPMLSPKPVCQNESSPFPTSTSS 543
Query: 455 STNQAMHKLDHKLDSLEDLG----------------HISPATDQSASSSFCNGAVSRLNS 498
+N H D D D H SPA DQSA ++ C+ A + +NS
Sbjct: 544 QSNPESHCSDQPHDCSNDATCLDQNVKDNTDSDHARHESPAADQSAGNNLCHDAANHVNS 603
Query: 499 MGYGSACGSNSNLDQVTAGRAKQLLIS 525
YGS +D G A ++S
Sbjct: 604 SAYGS-------MDSGNDGHATSAIVS 623
>gi|356520227|ref|XP_003528765.1| PREDICTED: two-component response regulator-like PRR95-like isoform
2 [Glycine max]
Length = 722
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 222/646 (34%), Positives = 297/646 (45%), Gaps = 153/646 (23%)
Query: 15 NGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGR 74
N N + +WE FL RM LRVLLVEAD STRQI+ ALLRK SY V AVPDGLKAWE LK +
Sbjct: 12 NSNAEVVRWERFLPRMVLRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKK 71
Query: 75 PRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYL 134
+DLILTEV+LP+ISGFALL+L+MEH+ICKNIPVIMMSS DSVS KCM++GA D+L
Sbjct: 72 APELDLILTEVELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFL 131
Query: 135 VKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQ 194
+KP+R+NELRNLWQHVWRR + TQ+ + +K++ SE+++ASN SSG +A +
Sbjct: 132 IKPIRKNELRNLWQHVWRRHAI---STPTQNTTFSPKKLKTASEDNSASNKSSGSVASSK 188
Query: 195 SKGEFIEKGSDEQSSCTK-----------------------------------PDFEAES 219
E E+ S+ QS+CT P FEA+S
Sbjct: 189 KNNECSERLSEAQSTCTSPIFEAESTYVENMQDVPQYVHCQVMQTLVQSTCTSPIFEAKS 248
Query: 220 AHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSLVPVTEAQGSEVAACKEANTRAH 279
+VE+M D+ S N + M HE + ++S E + V +A
Sbjct: 249 TYVENMQDVPP--LKSSKLNKIDMVKHEKFAQFERESAEHNDETEDKSVTIVSDAARCDK 306
Query: 280 FDEDTEL-----------ETHRSDVILTSEV------------CNVPVNSP-RQVIDFMS 315
E TEL ET D IL SE+ C+ P + ID ++
Sbjct: 307 TSELTELRPEQDCGVAEPETENEDEILKSELDGDNSHVSMMQGCSAERVKPSKGAIDLIA 366
Query: 316 AFNN-----HKPPSNNGA--SRFDSSPQLDLSLRRTHPDGFENQ----VERKFILRHSNA 364
N + S NG ++FD QL+LSLR P NQ E L HSN
Sbjct: 367 TVGNLPKHLDENCSLNGGNTTKFDCETQLELSLRSDFPGSSGNQASEATEESQRLNHSNT 426
Query: 365 SAFTRYTN-KPSEPQHSS--------------------LSGVCNQQKEFETDSEKNFSNI 403
SAF+ Y+N K +P S+ LSG+ + ++ S +N N+
Sbjct: 427 SAFSWYSNSKLLQPHFSTPSITFPEVNNLSWDSHESHKLSGITSGNCQY-GGSNQNLENM 485
Query: 404 L----------------TACNSYTPAATLSTQRS------VNSLATGHSKQSELAVSYP- 440
+ + C + +S +S SL S ++ P
Sbjct: 486 IGTVICQYGQVTPKLSNSQCGLLPVSGVISNLKSEGHGNVFTSLFYAQSGIHPMSSPKPV 545
Query: 441 -QQRPCPVPVSVKVNSTNQAMHKLDHKLDSLEDLG--------------------HISPA 479
Q P P S S ++ H D L D H SP
Sbjct: 546 CQNESSPFPTSTSTQSYPES-----HNSDQLHDCSNDATCLNQNVKDNTDSDHARHDSPV 600
Query: 480 TDQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQVTAGRAKQLLIS 525
DQSA +S C+ A + +NS YGS +D G A ++S
Sbjct: 601 ADQSAGNSLCHDAANHVNSSAYGS-------MDSGNDGNATSAIVS 639
>gi|281308386|gb|ADA58341.1| pseudo-response regulator 5a [Brassica rapa]
Length = 497
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 156/209 (74%), Gaps = 31/209 (14%)
Query: 16 GNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRP 75
G +G+ KWE FL ++ALRVLLVEADDSTRQI++ALLRK SYRV AVPDGLKAWE+LKG P
Sbjct: 39 GGDGLVKWERFLPKIALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGNP 98
Query: 76 RNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++DLIL EVDLPSISG+ALLTL+MEH++CKNIPVIMMS+ DSV+TVYKCM++GAADYLV
Sbjct: 99 ESVDLILAEVDLPSISGYALLTLIMEHDVCKNIPVIMMSTHDSVNTVYKCMLKGAADYLV 158
Query: 136 KPVRRNELRNLWQHVW-RRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQ 194
KP+RRNELRNLWQHVW RRQS++ G+ DES+G +K E
Sbjct: 159 KPLRRNELRNLWQHVWRRRQSTLAPGSFQLDESLGHRKPEGA------------------ 200
Query: 195 SKGEFIEKGSDEQSSCTKPDFEAESAHVE 223
QSSCT+P+ E ESA VE
Sbjct: 201 ------------QSSCTRPETEGESADVE 217
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 298 EVCNVPVNSPRQVIDFMSA-FNNHKPPSNNGASRFDSSPQLDLSLRRT--HPDGFENQVE 354
E +V +S ++ IDF+ A F ++ + + R + LDLSLRR+ HP
Sbjct: 212 ESADVEKDSSKEAIDFIGASFTRNEQHNREESVRIE----LDLSLRRSSLHP-------- 259
Query: 355 RKFILRHSNASAFTRYTNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAA 414
S+ SAFTRY +KP + Q S+S + Q++ T+SE NI+ N Y +
Sbjct: 260 -------SSGSAFTRYVHKPLQTQ-CSVSPLVPDQRKNVTESEDG--NIVVT-NQYKSSE 308
Query: 415 TLSTQRSVNSLATGHSKQSELAVSYPQQRPCPVPVSVK 452
+ N + +S S S+P Q P V +K
Sbjct: 309 PPPSAPRRNEASFYNSADSPGPPSWPGQGSYPTTVPIK 346
>gi|357512643|ref|XP_003626610.1| Two-component response regulator-like PRR37 [Medicago truncatula]
gi|87240854|gb|ABD32712.1| Response regulator receiver; CCT [Medicago truncatula]
gi|355501625|gb|AES82828.1| Two-component response regulator-like PRR37 [Medicago truncatula]
Length = 636
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 217/381 (56%), Gaps = 56/381 (14%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
F+ LRVLLVE DDSTR I++ALLR Y+V AV DGLKAWE LK + +IDL+LTEV
Sbjct: 8 FVPPTMLRVLLVEPDDSTRHIISALLRNCGYKVAAVRDGLKAWETLKNKSLDIDLVLTEV 67
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
DLPSISGF+LLT +M+H CKNIP+IMMSSQDSVSTV+K M+ GA D+L+KPVRRNELRN
Sbjct: 68 DLPSISGFSLLTQIMDHHNCKNIPLIMMSSQDSVSTVFKFMLNGAVDFLIKPVRRNELRN 127
Query: 146 LWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSD 205
LWQHVWRR +++ Q+ + Q K++ +EN+AASNHSSG +A E EK S+
Sbjct: 128 LWQHVWRRNTTITM--PPQNITFPQNKLDVAAENNAASNHSSGSVASTHKNIECSEKNSE 185
Query: 206 EQS---------SCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVN--YGQ 254
+ T P EA+S ++E+M D N +K + A G+
Sbjct: 186 PHKLATLVQSIFTSTSPFSEADSKYMENMQD-----------NSIKYERESAEYKDVTGE 234
Query: 255 KSLVPVTEAQGSEVAACKEANTRAHFDEDTEL-ETHRSDVILTSEV------CNVPVNSP 307
KS ++A G C + +T ++ + ET D +L +E+ N ++
Sbjct: 235 KSTTIASKAAG-----CDKISTGLRLGQNYDYSETENRDEVLGTELSKAHPHINTKIHQS 289
Query: 308 RQ--------VIDFMSAFNNHKPPSNNGA---------SRFDSSPQLDLSLRRTHPDG-F 349
ID M+ F+ K P NN A ++FD Q +LSL+R P
Sbjct: 290 NNELEDHSAGAIDLMATFD--KYPKNNHANCSFSGGNTAKFDFDTQFELSLQRDSPGSPP 347
Query: 350 ENQVERKFILRHSNASAFTRY 370
+ E + IL HSNASAF+ Y
Sbjct: 348 KPTTEERQILNHSNASAFSWY 368
>gi|84570635|dbj|BAE72702.1| pseudo-response regulator 95 homologue [Lemna gibba]
Length = 460
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/267 (50%), Positives = 181/267 (67%), Gaps = 17/267 (6%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ KWE FL RM LRVLLVEADDSTR+IV ALLRK Y+V++ DGL+AW+ LK +P + D
Sbjct: 19 VVKWEKFLPRMFLRVLLVEADDSTRKIVAALLRKCGYKVSSASDGLEAWKTLKEKPNDTD 78
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV+LP++SG+ALL+++MEHE CK+IPVIMMSS DS+ V++CM++GAAD+LVKP+R
Sbjct: 79 LVLTEVELPNVSGYALLSMMMEHETCKSIPVIMMSSNDSMKMVFECMLKGAADFLVKPIR 138
Query: 140 RNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
+NELRNLWQHVWRRQSS + E+V A SE ++ASNH+S M +
Sbjct: 139 KNELRNLWQHVWRRQSS------NRAENVPPVIGAANSEYNSASNHTSDCMDSNNKRRAG 192
Query: 200 IEKGSDEQSSCTKPDFEAESA-----HVEDMPD-LSRQLWGKSLQNDVKMQNHEARVNYG 253
EKG+D QSSCT+PD EAE + ED+ D L R+ GK + ++ E+ G
Sbjct: 193 SEKGNDTQSSCTRPDREAEISDDLMTDREDISDKLERETQGKDDARETCVKVVESTGGLG 252
Query: 254 QKSLVPVTEAQGSEVAACKEANTRAHF 280
Q P + +G V + +E T H+
Sbjct: 253 Q----PSSSGEGDFVDS-REDQTHHHY 274
>gi|84570629|dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lemna paucicostata]
Length = 448
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/201 (59%), Positives = 158/201 (78%), Gaps = 7/201 (3%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ WE FL+ M +RVLLVEADDSTR+IV ALLRK SY+V++ DGL+AW+ LK P NID
Sbjct: 19 VVNWEKFLRGMRVRVLLVEADDSTRKIVAALLRKCSYKVSSASDGLEAWKTLKESPNNID 78
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV+LP++SG+ALL+++MEH+ CK+IPVIMMSS+DS+ V++CM++GAAD+LVKP+R
Sbjct: 79 LVLTEVELPNVSGYALLSMMMEHDSCKSIPVIMMSSRDSMKMVFECMLKGAADFLVKPIR 138
Query: 140 RNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
+NELRNLWQHVWRRQS+ + N E+ E SE ++ASNHSS YM K +
Sbjct: 139 KNELRNLWQHVWRRQSANGAENTPPVEN------ETNSEYNSASNHSSYYMDS-NHKNKG 191
Query: 200 IEKGSDEQSSCTKPDFEAESA 220
EKG+D QSSCT+PD +AE++
Sbjct: 192 SEKGNDTQSSCTRPDTDAETS 212
>gi|242067499|ref|XP_002449026.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
gi|241934869|gb|EES08014.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
Length = 697
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 161/384 (41%), Positives = 221/384 (57%), Gaps = 44/384 (11%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ +W+ L R +LRVLLVE DDSTRQ+VTALLRK YRV AV DG+KAWEV++GR D
Sbjct: 43 LVRWDQILPRRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFD 102
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +PS+SG LL+ ++ + CKNIPVIMMSSQDS+ TV KCM +GA D+LVKPVR
Sbjct: 103 LVLTEVAMPSLSGIQLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVR 162
Query: 140 RNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
+NELRNLWQHVWRR + N SEN+AASNH S +A GE
Sbjct: 163 KNELRNLWQHVWRRHAMNCQTN--------------GSENNAASNHISANVANGSKTGEN 208
Query: 200 IEKGSDEQSSCTKPDFEAESAHVEDMPDLSR---QLWGKSLQNDVKMQNHEARVNYGQKS 256
++ SD QS +K + E +S VE +PD+ R ++ G S + + + ++++ RVN +
Sbjct: 209 SDEESDAQSFGSKRETEIQS--VEKLPDIRRDEDEVAGSSKKTESQNKSYDVRVNTKVDA 266
Query: 257 LVPVTEA-QGSEV---AACKEANTRAHFDED--------TELETHR-----SDVILTSEV 299
A GSE + C T A E T+ + R D+ +T
Sbjct: 267 SKDSDGAPSGSEKNVHSKCLNGITSAKVAEQIMDNALRITDASSRRPSNLGKDLAMTEPE 326
Query: 300 CNVPVNSPRQVIDFMSAFNNHKPPSNNGAS--RFDSSPQ--LDLSL-RRTHPDGFENQVE 354
+ S V++ + N+ + GA+ DS P L+ +L ++ H +G++NQ
Sbjct: 327 ADRKCQS--SVMENNAVTENNLGVKSKGAAICPADSCPSQFLETNLGKQHHLNGYKNQEF 384
Query: 355 R-KFILRHSNASAFTRYTNKPSEP 377
R K I HSN+SAF+RY NK EP
Sbjct: 385 REKDIFNHSNSSAFSRYGNKRIEP 408
>gi|326518812|dbj|BAJ92567.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 687
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 174/454 (38%), Positives = 232/454 (51%), Gaps = 73/454 (16%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ +W+ L R +LRVLLVE DDSTRQ+VTALLRK YRV AV DG+KAWEV++GR D
Sbjct: 26 VIRWDEILPRRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFD 85
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV++P++SG LL+ ++ + CKNIPVIMMSSQDS+ TV KCM GA D+LVKPVR
Sbjct: 86 LVLTEVNMPTLSGIDLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQNGAVDFLVKPVR 145
Query: 140 RNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
+NELRNLWQHVWRR S N SEN+AASNH S GE
Sbjct: 146 KNELRNLWQHVWRRHSMNSQLN--------------ASENNAASNHISVNSGTGSKTGEN 191
Query: 200 IEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEA-RVNYGQKSLV 258
++ SD QSS +K + E +S VE +P+ S + ++K+QN R+N +L
Sbjct: 192 SDEESDAQSSGSKRETEIQS--VEKLPETVTHNVASSPR-ELKVQNGPFDRMNTKAPALK 248
Query: 259 PVTEA-QGSEVAACK------EANTRAHF--------------DEDTELETHRS------ 291
+A G+ A K E N R+ + D + S
Sbjct: 249 GTDDAPSGNACGASKPQVFSAEKNVRSKYLHGITSAKVAGQIMDNAMRIADASSCRPSDL 308
Query: 292 --DVI-----LTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSS------PQLD 338
D++ TS+ C P+ NN P R DS P LD
Sbjct: 309 GKDLMATAQPTTSKKCKSPI-----------TMNNAVKPVMKNTLREDSKGTAIDHPSLD 357
Query: 339 LSL-RRTHPDGFENQVER-KFILRHSNASAFTRYTNKPSEPQHSSLSGVCNQQKEFETDS 396
++L ++ DG NQ R K HSN+SAF+RY NK EP LS E+ +
Sbjct: 358 VNLGKQQRSDGHVNQELRDKDNFNHSNSSAFSRYGNKRIEPSAKQLSLPSVHLTYQESVN 417
Query: 397 EKNF--SNILTACNSYTPAATLSTQRSVNSLATG 428
+KN S +L + +T T+ Q ++S G
Sbjct: 418 DKNVQSSGVLPSHEHHTCKITMQAQAPLDSCTEG 451
>gi|18407171|ref|NP_566085.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|52783231|sp|Q8L500.2|APRR9_ARATH RecName: Full=Two-component response regulator-like APRR9; AltName:
Full=Pseudo-response regulator 9
gi|9247022|gb|AAF86253.1|AF272040_1 timing of CAB expression 1-like protein [Arabidopsis thaliana]
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9 [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein [Arabidopsis thaliana]
gi|62320652|dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|330255660|gb|AEC10754.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 468
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/158 (67%), Positives = 127/158 (80%), Gaps = 5/158 (3%)
Query: 1 MGDVVL---ND--EELKEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSS 55
MG++V+ +D E +K + + +WE +L + LRVLLVE+D STRQI+TALLRK
Sbjct: 1 MGEIVVLSSDDGMETIKNRVKSSEVVQWEKYLPKTVLRVLLVESDYSTRQIITALLRKCC 60
Query: 56 YRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSS 115
Y+V AV DGL AWEVLK + NIDLILTE+DLPSISGFALL LVMEHE CKNIPVIMMSS
Sbjct: 61 YKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSS 120
Query: 116 QDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
QDS+ V KCM+RGAADYL+KP+R+NEL+NLWQHVWRR
Sbjct: 121 QDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 158
>gi|308913674|gb|ADO51647.1| PRR59 [Zea mays]
Length = 695
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 213/375 (56%), Gaps = 37/375 (9%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ +W+ L R +LRVLLVE DDSTRQIVTALLRK YRV AV DG+KAWEV++ R + D
Sbjct: 41 LVRWDQILPRRSLRVLLVEHDDSTRQIVTALLRKCGYRVAAVADGMKAWEVMRERAYDFD 100
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +PS+SG LL+ + CKNIPVIMMSSQDS+ TV KCM +GA D+LVKPVR
Sbjct: 101 LVLTEVAMPSLSGIQLLSRIAAAAECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVR 160
Query: 140 RNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
+NEL NLWQHVWRR + N SEN+AASNH S +A GE
Sbjct: 161 KNELGNLWQHVWRRHAMNCQTN--------------GSENNAASNHVSTNVANGSKTGEN 206
Query: 200 IEKGSDEQSSCTKPDFEAESAHVEDMPDLSR-QLWGKSLQNDVKMQNHEA---RVNYGQK 255
++ SD QS K + E +SA E +PD+ R ++ G S + +++ ++++ +V+ +
Sbjct: 207 NDEESDAQSFGNKRETEIKSA--ETLPDIRRDEMAGSSKKIELQNKSNDGVNTKVDASKD 264
Query: 256 SLVPVTEAQGSEVAACKEANTRAHFDE---DTELE----THRSDVILTSEVCNVPVNSPR 308
S +E++ + + C T A E D L + R L ++ + R
Sbjct: 265 SDGAPSESEKNVRSKCLNGITSAKVAEQIMDNALRITDASSRRPTNLGKDLAMTEPAADR 324
Query: 309 QVIDFMSAFN--NHKPPSNNGASRF----DSSPQ--LDLSL-RRTHPDGFENQVER-KFI 358
+ + N K P S DS P L+ +L ++ + +G++NQ R K I
Sbjct: 325 KCQSLVMENNAVKEKNPGEKSKSAVIGHADSYPSQFLETNLGKQQYRNGYKNQEFREKDI 384
Query: 359 LRHSNASAFTRYTNK 373
HSN+SAF+RY N+
Sbjct: 385 FNHSNSSAFSRYGNR 399
>gi|297824763|ref|XP_002880264.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
gi|297326103|gb|EFH56523.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 106/158 (67%), Positives = 127/158 (80%), Gaps = 5/158 (3%)
Query: 1 MGDVVL---ND--EELKEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSS 55
MG++V+ +D E +K + + +WE +L + LRVLLVE+D STRQI+TALLRK
Sbjct: 1 MGEIVVLSSDDGMETIKNRVKSSEVVQWEKYLPKTVLRVLLVESDYSTRQIITALLRKCC 60
Query: 56 YRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSS 115
Y+V AV DGL AWEVLK + NIDLILTE+DLPSISGFALL LVMEHE CKNIPVIMMSS
Sbjct: 61 YKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSS 120
Query: 116 QDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
QDS+ V KCM+RGAADYL+KP+R+NEL+NLWQHVWRR
Sbjct: 121 QDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 158
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 13/148 (8%)
Query: 311 IDFMSAFNNHKPPSNNGASRFDS--SPQLDLSLRRTHPDGFENQVERKF-ILRHSNASAF 367
+D + + +P S G + D P+L LSL+R+ FENQ E K L S+ASAF
Sbjct: 231 MDLIGGIDK-RPDSIYGDNSRDECVGPELGLSLKRSCSVSFENQDESKHQKLSLSDASAF 289
Query: 368 TRYTN-KPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSLA 426
R+ N KP+E +L + + + T+S + + + S A T S Q ++ S +
Sbjct: 290 LRFENSKPAEKAVVALDESTSGEPKTPTESHEKLRKVRSDQGS---ATTSSNQENIGSSS 346
Query: 427 -TGHSKQSELAVSYPQQRP----CPVPV 449
+G Q+EL+ Q+ P+PV
Sbjct: 347 VSGQCGQNELSFRNQVQKQHLQDSPIPV 374
>gi|218202508|gb|EEC84935.1| hypothetical protein OsI_32150 [Oryza sativa Indica Group]
Length = 623
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/371 (40%), Positives = 199/371 (53%), Gaps = 47/371 (12%)
Query: 19 GIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI 78
G ++ L RM +RVLL E DDSTR I+ ALLRK YRV A DG+KAW++LK + NI
Sbjct: 30 GSSRETRMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNI 89
Query: 79 DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
DL+LTEV+LP +SGF LL+ +MEH+ CKNIPVIMMSS DSVS V+KCM++GAAD+LVKP+
Sbjct: 90 DLVLTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPI 149
Query: 139 RRNELRNLWQHVWRRQ--SSMVSGNETQDE---------SVGQQKIEATSENDAASNHSS 187
R+NELRNLWQHVWR+Q S ++ TQ E G K E +EN N
Sbjct: 150 RKNELRNLWQHVWRKQLSSGVLDVQHTQQEDNLTERHEQKTGVTKAEHVTENVVHKN--- 206
Query: 188 GYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHE 247
M C E+ SD QSSCT+ + EA+S H ++ + +Q G+ K +
Sbjct: 207 --MEC-------SEQESDAQSSCTRSELEADSRHTNNLLEY-KQPMGRHFS---KPDHKN 253
Query: 248 ARVNYGQK-------SLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVC 300
N G K +L+P E S R D E D+ L +
Sbjct: 254 TEKNGGTKIHASNDGNLIPRREEDASP--------RRMTCSNDINCEKASRDMELVHIID 305
Query: 301 NVPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQVE-RKFIL 359
N N+ +D A + N+ + QL+LSLRR+ E+Q + + L
Sbjct: 306 NQQKNNTHMEMDVARANSR----GNDDKCFSIPAHQLELSLRRSDYSRLESQEKNERRTL 361
Query: 360 RHSNASAFTRY 370
HS +S F+ Y
Sbjct: 362 NHSTSSPFSLY 372
>gi|357159597|ref|XP_003578497.1| PREDICTED: two-component response regulator-like PRR95-like
[Brachypodium distachyon]
Length = 626
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 208/360 (57%), Gaps = 43/360 (11%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L M +RVLL E DDSTR +++ALLRK Y V A DG+KAWE+LK + NIDL+LTEV+
Sbjct: 34 LPMMPVRVLLAEGDDSTRHVISALLRKCGYHVAAASDGVKAWEILKEKSFNIDLVLTEVE 93
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
LP++SGF LL+ +MEHE CKNIPVIMMSS D+VS V+KCM++GAAD+LVKP+R+NELRNL
Sbjct: 94 LPAMSGFLLLSTIMEHEACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNL 153
Query: 147 WQHVWRRQSS---MVSGNETQD-------ESVGQQKIEATSENDAASNHSSGYMACIQSK 196
WQHVWR+Q S +V + +D + G K E EN A +
Sbjct: 154 WQHVWRKQLSNGGLVQHTQQEDKLTEWQGQKTGVTKAEHLIENVA------------HKR 201
Query: 197 GEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVN---YG 253
E E+ SD QSSCT+ + EAES H + + +Q+ GK L +D+K +
Sbjct: 202 KECSEQESDAQSSCTRSEVEAESKHTNNFLEF-KQITGKYLSSDLKSTEDNGQTKTQTIR 260
Query: 254 QKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQV-ID 312
+L+P E +++ K+ + D D + T +V+ + + S Q +D
Sbjct: 261 DDNLIPRRE---RDLSPRKQPCLK---DNDCQKATREIEVV---HIIDDEQKSNAQTDVD 311
Query: 313 FM-SAFNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQVER-KFILRHSNASAFTRY 370
M + F+ + + G S + QL+LSLRR+ ++Q + K L HS +SAF+ Y
Sbjct: 312 VMRTTFHGN---CDKGFSI--PAHQLELSLRRSDYSKLDDQEKNDKRTLNHSTSSAFSLY 366
>gi|312283015|dbj|BAJ34373.1| unnamed protein product [Thellungiella halophila]
Length = 486
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/148 (69%), Positives = 122/148 (82%), Gaps = 4/148 (2%)
Query: 12 KEMNGNEG----IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKA 67
+EM N G + +WE +L + LRVLLVE+DDSTRQI+TALLRK Y+V AV DGL A
Sbjct: 17 EEMMVNRGKSSEVVRWEKYLPKTVLRVLLVESDDSTRQIITALLRKCYYKVVAVSDGLAA 76
Query: 68 WEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMM 127
WE LK + +IDLILTE+DLPSISGFALL LVME+E CKNIPVIMMSSQDS++ V KCM+
Sbjct: 77 WETLKEKSHSIDLILTELDLPSISGFALLALVMENEACKNIPVIMMSSQDSITLVLKCML 136
Query: 128 RGAADYLVKPVRRNELRNLWQHVWRRQS 155
RGAADYL+KP+R+NEL+NLWQHVWRR S
Sbjct: 137 RGAADYLIKPMRKNELKNLWQHVWRRHS 164
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 17/128 (13%)
Query: 335 PQLDLSLRRTHPDGFENQVERKF-ILRHSNASAFTRYTN-KPSEPQHSSLSGVCNQQKEF 392
P+L LSL+R+ ENQ E K L S+ASAF RY N KP+E +L + + +
Sbjct: 266 PELGLSLKRSCSGSLENQAESKHQKLSFSDASAFLRYENSKPAEKAVVALDASSSAEPKT 325
Query: 393 ETDSEKNFSNILTACNSYTPAATLSTQRSVNSLATGHSKQSELAVS----------YPQQ 442
++S + + C+ + A T S Q ++ S + S Q+EL+ +PQ
Sbjct: 326 PSESHEKLRKV--RCD-HGSATTSSNQENIGSSSV--SGQNELSFRNQVLVTSQKPHPQD 380
Query: 443 RPCPVPVS 450
P PV S
Sbjct: 381 SPFPVETS 388
>gi|226499102|ref|NP_001151536.1| two-component response regulator-like PRR95 [Zea mays]
gi|195647486|gb|ACG43211.1| two-component response regulator-like PRR95 [Zea mays]
Length = 630
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 198/355 (55%), Gaps = 33/355 (9%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
L RM +RVLL E DDSTR +++ALLRK YRV A DG+KAW++LK + NIDL+LTEV
Sbjct: 38 MLPRMPVRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEV 97
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
+LP +SGF LL+ +MEH+ KNIPVIMMSS DSVS V+KCM++GAAD+LVKP+R+NELRN
Sbjct: 98 ELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPLRKNELRN 157
Query: 146 LWQHVWRRQSSMVSGN----ETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIE 201
LWQHVWR+Q + +G Q+E++ ++ + T A + +S G + E E
Sbjct: 158 LWQHVWRKQ--LANGGPDVQHIQEENLAERMEQKTGVTKADNLNSDGP----RKNRECSE 211
Query: 202 KGSDEQSSCTKPDFEAESAH----VEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSL 257
+ SD QSSCT+ + EAES +E M R L +S D+++ N E + +L
Sbjct: 212 QESDAQSSCTRSELEAESKQTNNILEYMQSTERHLSIRS-HKDLEL-NGETKTRTKGNNL 269
Query: 258 VPVTEAQGS-EVAACKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSA 316
+P E S + C N D EL V + +Q D
Sbjct: 270 IPTREDDLSPKKRTCLNDNNSERTSRDMEL---------------VHIMDNQQKHDTQRD 314
Query: 317 FNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQVER-KFILRHSNASAFTRY 370
+ + S + QL+LSLRRT EN + + L HS +SAF Y
Sbjct: 315 VDTMRTTSRGNDENSIPAHQLELSLRRTDYGKLENHEKNDRRTLNHSTSSAFYLY 369
>gi|115480333|ref|NP_001063760.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|68565887|sp|Q689G6.1|PRR95_ORYSJ RecName: Full=Two-component response regulator-like PRR95; AltName:
Full=Pseudo-response regulator 95; Short=OsPRR95
gi|51571881|dbj|BAD38857.1| pseudo-response regulator 95 [Oryza sativa Japonica Group]
gi|52075943|dbj|BAD46023.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|52077226|dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|113631993|dbj|BAF25674.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|215695172|dbj|BAG90363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695375|dbj|BAG90566.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641971|gb|EEE70103.1| hypothetical protein OsJ_30112 [Oryza sativa Japonica Group]
Length = 623
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 199/381 (52%), Gaps = 67/381 (17%)
Query: 19 GIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI 78
G ++ L RM +RVLL E DDSTR I+ ALLRK YRV A DG+KAW++LK + NI
Sbjct: 30 GSSRETRMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNI 89
Query: 79 DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
DL+LTEV+LP +SGF LL+ +MEH+ CKNIPVIMMSS DSVS V+KCM++GAAD+LVKP+
Sbjct: 90 DLVLTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPI 149
Query: 139 RRNELRNLWQHVWRRQ--SSMVSGNETQDE---------SVGQQKIEATSENDAASNHSS 187
R+NELRNLWQHVWR+Q S ++ TQ E G K E +EN N
Sbjct: 150 RKNELRNLWQHVWRKQLSSGVLDVQHTQQEDNLTERHEQKTGVTKAEHVTENVVHKN--- 206
Query: 188 GYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHE 247
M C E+ SD QSSCT+ + EA+S ++ L+ M H
Sbjct: 207 --MEC-------SEQESDAQSSCTRSELEADSRQTNNL-----------LEYKQPMGRHF 246
Query: 248 ARVNYGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHR-SDVILTSEVCNVPVNS 306
++ ++ TE G T+ H D L R D L C+ +N
Sbjct: 247 SKPDHKN------TEKNGG---------TKIHASNDGNLIPRREEDASLRRMTCSNDINC 291
Query: 307 PR--------QVIDFMSAFNNH------KPPSNNGASRFDSSP--QLDLSLRRTHPDGFE 350
+ +ID N H + S + S P QL+LSLRR+ E
Sbjct: 292 EKASRDMELVHIIDNQQKNNTHMEMDVARANSRGNDDKCFSIPAHQLELSLRRSDYSRLE 351
Query: 351 NQVE-RKFILRHSNASAFTRY 370
+Q + + L HS +S F+ Y
Sbjct: 352 SQEKNERRTLNHSTSSPFSLY 372
>gi|224132558|ref|XP_002321351.1| response regulator [Populus trichocarpa]
gi|222868347|gb|EEF05478.1| response regulator [Populus trichocarpa]
Length = 477
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 193/368 (52%), Gaps = 63/368 (17%)
Query: 207 QSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSLVPVTEAQGS 266
+SSCTKP EAE AH+E+M + + +W K D MQ HE VN GQK LV +EA+GS
Sbjct: 31 KSSCTKPGLEAEGAHMENMQEFLQPVWSKFSLTDTNMQKHEEHVNLGQKLLVRDSEAEGS 90
Query: 267 EVAACKEANTRAHFDEDTELETHRSDVILTSEVCN---VPVNSPRQVIDFMSAFNNHKPP 323
A C+++N + D++ + R + E C+ NSPR+ IDFM A NH
Sbjct: 91 ATAVCEDSN-KITVDKEITPGSGRVTANIAIEGCDKIGALANSPREAIDFMGASTNHS-S 148
Query: 324 SNNGASRFDSSPQLDLSLRRTHPDGFENQV-ERKFILRHSNASAFTRYTNKPSEPQHSSL 382
NN F SSP LDLSLRR+HP GFE QV E + LRHSNASAFT YTN+ S+ HS+L
Sbjct: 149 FNNVEIHFCSSPHLDLSLRRSHPSGFETQVTEERHTLRHSNASAFTWYTNRASQLPHSAL 208
Query: 383 SGVCNQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSLATGHSKQSELAVSYPQQ 442
+ NQ+ EF + + S+ + NS + ST+RS SLA G +K+ E+ S +
Sbjct: 209 ANTGNQE-EFRANYDGKISSNVNGYNSDALSLAPSTRRSAISLAAGQTKEYEIVTSSSGE 267
Query: 443 RPCPVPVSVKVNSTN----------------------QAMHKL----------------- 463
+ P+ + VK N + +HK+
Sbjct: 268 KVFPIHIPVKDTRFNNLCNSYGAVLPPMMSQSSASQKEPIHKVNPFQCSNYGSTSVQLCD 327
Query: 464 -----------------DHKLDSLEDLGHISPATDQSASSSFCNGAVSRLNSMGYGSACG 506
++KLDSLE HIS ATDQSASSSFCNGA S NS+GYGSA G
Sbjct: 328 RLGQNANDSINGSLQKQENKLDSLEGREHISSATDQSASSSFCNGAASHFNSIGYGSASG 387
Query: 507 SNSNLDQV 514
S SN DQ+
Sbjct: 388 SYSNADQI 395
>gi|357157434|ref|XP_003577797.1| PREDICTED: two-component response regulator-like PRR95-like,
partial [Brachypodium distachyon]
Length = 681
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/227 (51%), Positives = 148/227 (65%), Gaps = 17/227 (7%)
Query: 19 GIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI 78
G+ +W+ L R +LRVLLVE DDSTRQ+VTALLRK YRV AV DG+KAWEV++GR
Sbjct: 5 GVIRWDEILPRRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAF 64
Query: 79 DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
DL+LTEVD+P++SG LL ++ CKNIPVIMMSSQDS+ TV +CM GA D+LVKPV
Sbjct: 65 DLVLTEVDMPTLSGIDLLARIVAAHECKNIPVIMMSSQDSIGTVLRCMQNGAVDFLVKPV 124
Query: 139 RRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGE 198
R+NELRNLWQHVWRR S N SEN+AASNH S G+
Sbjct: 125 RKNELRNLWQHVWRRHSMNTQTN--------------ASENNAASNHISANSGNRSKTGD 170
Query: 199 FIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQN 245
++ SD QSS +K + E +S VE +P+ + G S ++ +QN
Sbjct: 171 NSDEESDAQSSGSKRETEIQS--VEKLPETVTEN-GASSSRELTIQN 214
>gi|281308390|gb|ADA58343.1| pseudo-response regulator 9 [Brassica rapa]
Length = 412
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 95/134 (70%), Positives = 116/134 (86%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ +WE +L + L+VLLVE+DDSTRQI+TALL+K SY+V AV DGL AWE LK + ID
Sbjct: 14 VVQWEKYLPKTVLKVLLVESDDSTRQIITALLQKCSYKVVAVSDGLAAWETLKEKSNEID 73
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
LILTE+DLP+ISGFALL LVMEHE CKNIPVIMMSS+DS++ V KCM++GAADYL+KP+R
Sbjct: 74 LILTELDLPAISGFALLALVMEHEACKNIPVIMMSSEDSMTMVLKCMLKGAADYLIKPMR 133
Query: 140 RNELRNLWQHVWRR 153
+NEL+NLWQHVWRR
Sbjct: 134 KNELKNLWQHVWRR 147
>gi|226497556|ref|NP_001141486.1| uncharacterized protein LOC100273598 [Zea mays]
gi|194704770|gb|ACF86469.1| unknown [Zea mays]
gi|414886440|tpg|DAA62454.1| TPA: hypothetical protein ZEAMMB73_402220 [Zea mays]
Length = 629
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 204/359 (56%), Gaps = 38/359 (10%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
L RM +RVLL E DDSTR +++ALLRK YRV A DG+KAW++LK + N+DL+LTEV
Sbjct: 37 MLPRMPVRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDLLKEKSFNVDLVLTEV 96
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
+LP +SGF LL+ +MEH+ KNIPVIMMSS DSVS V+KCM++GAAD+LVKP+R+NELRN
Sbjct: 97 ELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPIRKNELRN 156
Query: 146 LWQHVWRRQSS-------MVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGE 198
LWQHVWR+Q + + E E + QQK T ++ + + C E
Sbjct: 157 LWQHVWRKQLANGGPNVQHIQREENLAERI-QQKTGVTKSDNLDRD-----VPC--KNRE 208
Query: 199 FIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSLV 258
E+ SD QSSCT+ + EAES +++ + + +S Q + + +H+ GQ
Sbjct: 209 CSEQESDAQSSCTRSELEAESKQTDNILE-----YKQSTQRHLSIPSHKNVELNGQ---T 260
Query: 259 PVTEAQGSEVAACKEAN----TRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFM 314
+ A+G+ + +E + R +E+ R D+ L + N + + +D M
Sbjct: 261 KIQRAEGNNLIPAREDDLSPKKRTCLNENNSERASR-DMELVHIMENQQKYNTQWEVDTM 319
Query: 315 SAFNNHKPPSNNGASRFDSSP--QLDLSLRRTHPDGFENQVER-KFILRHSNASAFTRY 370
++ G S P QL+LSLRRT EN + + L HS +SAF+ Y
Sbjct: 320 RT-------TSRGNDEKGSIPAHQLELSLRRTDYGKLENHEKNDRRTLNHSTSSAFSLY 371
>gi|414590048|tpg|DAA40619.1| TPA: hypothetical protein ZEAMMB73_710468 [Zea mays]
Length = 596
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 260/546 (47%), Gaps = 118/546 (21%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
L RM +RVLL E DDSTR +++ALLRK YRV A DG+KAW++LK + NIDL+LTEV
Sbjct: 38 MLPRMPVRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEV 97
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
+LP +SGF LL+ +MEH+ KNIPVIMMSS DSVS V+KCM++GA+D+LVKP+R+NELRN
Sbjct: 98 ELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGASDFLVKPLRKNELRN 157
Query: 146 LWQHVWRRQSSMVSGN----ETQDESVG---QQKIEATSENDAASNHSSGYMACIQSKGE 198
LWQHVWR+Q + +G Q+E++ +QK T +++ S+ C
Sbjct: 158 LWQHVWRKQ--LANGGPDVQHIQEENLAERMEQKTGVTKDDNLNSDGPCKNREC------ 209
Query: 199 FIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGK--SLQNDVKMQNHEARVNYGQKS 256
E+ SD QSSCT+ + EAE+ +P L K + ND N+ R + +
Sbjct: 210 -SEQESDAQSSCTRSELEAETKGNNLIPTREDDLLPKKRTCLND----NNSERTSRDME- 263
Query: 257 LVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSA 316
LV + + N + H D +++T R+ E ++P +
Sbjct: 264 LVHIMD------------NQQKH-DTQRDVDTMRTTSRRNDEKNSIPAH----------- 299
Query: 317 FNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQVER-KFILRHSNASAFTRYTNKPS 375
QL+LSLRRT EN + + L HS +SAF Y + +
Sbjct: 300 -------------------QLELSLRRTDYGKLENHEKNDRRTLNHSTSSAFYLYNCRTA 340
Query: 376 EPQHSSLSG-VCNQQKEF--------------ETDSEKNFSNILTA-------CNSY--- 410
++ G +C+ + E +E N I C ++
Sbjct: 341 SSLGNAGDGQLCSTSETLVDVENRNGDLAALSEDTTETNRPPIRVVPFPVPVQCFTFDGQ 400
Query: 411 -----TPAATLSTQRSV----NSLATGHSKQSELAVSYPQ--QRPCPVPVSVK------- 452
TP A+ +S NS + + A S PQ Q+ PV + K
Sbjct: 401 PFWNGTPVASPFYPQSAPPIWNSKTPTWQESTPQATSLPQKSQQKEPVEMDAKPVENAEE 460
Query: 453 --VNSTNQAMHKLDHKLDSLEDLGHISPATDQSASSSFCNGAVSRLNSMGYGSACGSNSN 510
V A K H +DL HISP T +S S+ + + L+S G C S SN
Sbjct: 461 QFVVGPPSASGKQLHVEIPKDDLRHISPVTGESGISTVLDSTRNTLSSSG----CDSTSN 516
Query: 511 LDQVTA 516
Q+TA
Sbjct: 517 --QITA 520
>gi|77548762|gb|ABA91559.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 699
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 244/484 (50%), Gaps = 66/484 (13%)
Query: 19 GIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI 78
G+ +W+ L R +LRVLLVE DDSTRQ+VTALLRK YRV AV DG+KAW V++ R
Sbjct: 31 GVIRWDQILPRRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWGVMRERAYAF 90
Query: 79 DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
DL+LTEV +P++SG LL+ ++ + CKNIPVIMMSSQDS+ TV +CM +GA D+LVKPV
Sbjct: 91 DLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKPV 150
Query: 139 RRNELRNLWQHVWRRQSSMVSGNETQDESV----------GQQKIEATSENDAASNHSSG 188
R+NELRNLWQHVWRR + N +++ + G + E + E A + S
Sbjct: 151 RKNELRNLWQHVWRRHAMNSQTNASENNAASNHLSANGGNGSKTGEHSDEESDAQSSGSK 210
Query: 189 YMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGK------SLQNDVK 242
IQS + E +D + ++ + + ++ ++ M S L G + D +
Sbjct: 211 REVEIQSAEKLPEVVADGGAGSSR-EHKIQNGFIDGMNTKSHALKGNDDAPSGNACGDSE 269
Query: 243 MQNHEARVNYGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHR--SDVILTSEVC 300
+Q N K L +T A+ A + + F + + L + D+++ ++
Sbjct: 270 LQVLSTEKNVRSKFLNGITSAK----VAGQIMDNALRFADSSSLRSSDPGKDLLVVAQT- 324
Query: 301 NVPVNSPRQVIDFMSAFNNHKPPSNN--------GASRFDSSPQ--LDLSLRRTHP-DGF 349
+ R+ SA N+ NN +S P ++++L + H +G+
Sbjct: 325 ----TADRKCKS--SALENNAVMENNLSENSKGTATGHAESCPSHFVEINLEKQHHLNGY 378
Query: 350 EN-QVERKFILRHSNASAFTRYTNKPSE-----PQHSSLSGVCNQQKEFETDSEKNFSNI 403
N ++ K I HSN+SAF+RY NK E P S V +QQ ++ + + S +
Sbjct: 379 TNHKLNEKDIFNHSNSSAFSRYGNKRIESSAQRPFPPSFR-VVHQQPVYDKNPQS--SRV 435
Query: 404 LTACNSYTPAATLSTQ----RSVNSLA------------TGHSKQSELAVSYPQQRPCPV 447
L +C T +T+ Q RS A T S + ++++P PV
Sbjct: 436 LLSCEHNTRESTVQAQVPLDRSTEGAAILCSSSVREDAGTSSSSPRKDSLTHPSYGFIPV 495
Query: 448 PVSV 451
P+ V
Sbjct: 496 PIPV 499
>gi|297736458|emb|CBI25329.3| unnamed protein product [Vitis vinifera]
Length = 769
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 150/438 (34%), Positives = 218/438 (49%), Gaps = 62/438 (14%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
I +WE FL +L+VLLVE D+STRQ+V+ALLR SY VTAV +G++AW +L ++D
Sbjct: 82 IVRWERFLPLRSLKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVD 141
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+L EV LPS+SG LL +M H+ CKNIPVIMMSS DSV V+KC+ +GA D+ VKP+R
Sbjct: 142 LVLAEVALPSLSGIGLLCKIMNHKACKNIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIR 201
Query: 140 RNELRNLWQHVWRRQSSMVSGNETQDESV-----GQQKIEATSENDAASN-HSSGYMACI 193
+NEL+NLWQHVWR+ + + + K A S+N+ SN +G +
Sbjct: 202 KNELKNLWQHVWRKFHRFSGSESESESGIRTKKSAKSKSVAGSDNNTGSNDEDNGSIGLN 261
Query: 194 QSKGEFIEKGSDEQSSCTKPDFEAESA-------HVEDMPDLS----RQLWGKSLQN--- 239
G + GS QSS TK E +S D PD + Q W ++ N
Sbjct: 262 VRDGS--DNGSGTQSSWTKMAVEVDSPKPMQPWDQSADPPDSTCAQVTQSWPEAFGNYQV 319
Query: 240 ------DVKMQNHEA-RVNYGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSD 292
D + Q+ E V G+ + V ++ ++ A+ D+ EL + D
Sbjct: 320 PMTSSKDYQEQDDELDNVEMGKDLKIGVPRNSNLQL---QDDVVGANKDKFHELTLKKDD 376
Query: 293 VILTSEVCNVPVNSP-----RQVIDFMSAF-NNHKP----------------PSNNGASR 330
L + ++ N P ++ +D MS NN P P +
Sbjct: 377 EKLENRQMDLNSNKPNDELDKEAVDLMSVIANNTNPQKKSMGFKTPSGLSEVPETKDKAM 436
Query: 331 FDSS--PQLDLSLRRTH-PDGFENQVERKFILRHSNASAFTRYTNKPSEPQHS-----SL 382
+D P L+LSL+R G + + I RHS+ SAF+RY + + Q S S
Sbjct: 437 YDKKEIPSLELSLKRLRDTGGTDTNPHDQIIWRHSDLSAFSRYNSASTAIQASTGNVGSC 496
Query: 383 SGVCNQQKEFETDSEKNF 400
S + N + +T+S +NF
Sbjct: 497 SPLDNSSEAAKTESMQNF 514
>gi|84570627|dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lemna paucicostata]
Length = 501
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/165 (58%), Positives = 122/165 (73%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ +WE FL R +LRVLLVE DD TR IVTALLRK SY V AV DG+KAW++++ + N D
Sbjct: 61 VIRWERFLPRRSLRVLLVEPDDCTRHIVTALLRKCSYHVAAVADGIKAWDIVEEKNFNFD 120
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+IL+EV++PS SG LL+ +M E+ ++IPVIMMSSQDSVS V+KCM +GA D+LVKPVR
Sbjct: 121 IILSEVEVPSFSGINLLSKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVR 180
Query: 140 RNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASN 184
+NELRNLWQHVWRR S+ N T++ Q E S N+ A N
Sbjct: 181 KNELRNLWQHVWRRHCSIPYANGTENGDNTQSASENMSNNNGAGN 225
>gi|359486449|ref|XP_002275645.2| PREDICTED: two-component response regulator-like PRR73 [Vitis
vinifera]
Length = 747
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 150/438 (34%), Positives = 218/438 (49%), Gaps = 62/438 (14%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
I +WE FL +L+VLLVE D+STRQ+V+ALLR SY VTAV +G++AW +L ++D
Sbjct: 60 IVRWERFLPLRSLKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVD 119
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+L EV LPS+SG LL +M H+ CKNIPVIMMSS DSV V+KC+ +GA D+ VKP+R
Sbjct: 120 LVLAEVALPSLSGIGLLCKIMNHKACKNIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIR 179
Query: 140 RNELRNLWQHVWRRQSSMVSGNETQDESV-----GQQKIEATSENDAASN-HSSGYMACI 193
+NEL+NLWQHVWR+ + + + K A S+N+ SN +G +
Sbjct: 180 KNELKNLWQHVWRKFHRFSGSESESESGIRTKKSAKSKSVAGSDNNTGSNDEDNGSIGLN 239
Query: 194 QSKGEFIEKGSDEQSSCTKPDFEAESA-------HVEDMPDLS----RQLWGKSLQN--- 239
G + GS QSS TK E +S D PD + Q W ++ N
Sbjct: 240 VRDGS--DNGSGTQSSWTKMAVEVDSPKPMQPWDQSADPPDSTCAQVTQSWPEAFGNYQV 297
Query: 240 ------DVKMQNHEA-RVNYGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSD 292
D + Q+ E V G+ + V ++ ++ A+ D+ EL + D
Sbjct: 298 PMTSSKDYQEQDDELDNVEMGKDLKIGVPRNSNLQL---QDDVVGANKDKFHELTLKKDD 354
Query: 293 VILTSEVCNVPVNSP-----RQVIDFMSAF-NNHKP----------------PSNNGASR 330
L + ++ N P ++ +D MS NN P P +
Sbjct: 355 EKLENRQMDLNSNKPNDELDKEAVDLMSVIANNTNPQKKSMGFKTPSGLSEVPETKDKAM 414
Query: 331 FDSS--PQLDLSLRRTH-PDGFENQVERKFILRHSNASAFTRYTNKPSEPQHS-----SL 382
+D P L+LSL+R G + + I RHS+ SAF+RY + + Q S S
Sbjct: 415 YDKKEIPSLELSLKRLRDTGGTDTNPHDQIIWRHSDLSAFSRYNSASTAIQASTGNVGSC 474
Query: 383 SGVCNQQKEFETDSEKNF 400
S + N + +T+S +NF
Sbjct: 475 SPLDNSSEAAKTESMQNF 492
>gi|84570633|dbj|BAE72701.1| pseudo-response regulator 59 homologue [Lemna gibba]
Length = 496
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 137/203 (67%), Gaps = 12/203 (5%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ +WE FL R +LRVLLVE DDSTR IVTALLRK SY V +V DG+KAW+++K + N D
Sbjct: 45 VIRWERFLPRRSLRVLLVEPDDSTRHIVTALLRKCSYHVASVADGIKAWDIVKEKNFNFD 104
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+IL+EV++PS SG +LLT +M E+ ++IPVIMMSSQDSVS V+KCM +GA D+LVKPVR
Sbjct: 105 IILSEVEVPSFSGISLLTKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVR 164
Query: 140 RNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
+NELRNLWQHVWRR S N ++ + E S N+ A N + K
Sbjct: 165 KNELRNLWQHVWRRHCSTRYPNGAENGANNPSASENMSNNNGAGN---------EMKDSR 215
Query: 200 IEKG---SDEQSSCTKPDFEAES 219
+ +G +D+QSS + P ES
Sbjct: 216 MAEGCDDNDDQSSGSNPLIHIES 238
>gi|334715193|gb|AEG90652.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 215/417 (51%), Gaps = 45/417 (10%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FLQ+ + VLLVE+DD TR++V+ALLR Y+V + +G +AW L+ + NID++L
Sbjct: 71 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVL 130
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
EV +P +SG +LL+ +M H ICKNIPVIMMSS D+ +TV+KC+ +GA D+LV P+R+NE
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNE 190
Query: 143 LRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKG-E 198
L+NLWQHVWRR S S + Q + G+ K S N++ SN S A + +
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCGKSKGGKESGNNSGSNDSHDNEADMGLNARD 250
Query: 199 FIEKGSDEQSSCTKPDFEAESAH------VEDMPD---------LSRQLWGKSLQNDVKM 243
+ GS QSS TK E +S + D PD S + L +D K
Sbjct: 251 DSDNGSGTQSSWTKCAVEMDSPQAMSLDQLADSPDSTCAQVIHPKSEICSNRRLPDDFKE 310
Query: 244 QNHEARVNYGQKSLV----------PVTEAQGSEVAACKEANTRAHFDEDTELETHRSDV 293
++ E G +L P+ G + N++ ++ E T R+
Sbjct: 311 KDLEIG---GPGNLYIDHQSSPNERPIKATDG-RCEYPPKNNSKESMMQNLEDPTVRAAD 366
Query: 294 ILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSS-PQLDLSLRRTHPDGF-EN 351
++ S N+ + D + + K P ++ D P L+LSL+R+ G+ N
Sbjct: 367 LIGSMAKNMDTQEAARAADTPNLPS--KVPEGKDKNKHDKILPSLELSLKRSRSCGYGAN 424
Query: 352 QV---ERKFILRHSNASAFTRY-TNKPSEPQHSSLSGVC----NQQKEFETDSEKNF 400
V E++ +LR SN SAFTRY T+ S + L G C N + +TDS N
Sbjct: 425 TVKADEQQNVLRQSNLSAFTRYHTSTASNQGGTGLVGSCSPHDNSSEAMKTDSTYNM 481
>gi|334715203|gb|AEG90657.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 215/417 (51%), Gaps = 45/417 (10%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FLQ+ + VLLVE+DD TR++V+ALLR Y+V + +G +AW L+ + NID++L
Sbjct: 71 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVL 130
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
EV +P +SG +LL+ +M H ICKNIPVIMMSS D+ +TV+KC+ +GA D+LVKP+R+NE
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNE 190
Query: 143 LRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKG-E 198
L+NLWQHVWRR S S + Q + G+ K S N++ SN S A + +
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCGKSKGGKESGNNSGSNDSHDNEADMGLNARD 250
Query: 199 FIEKGSDEQSSCTKPDFEAESAH------VEDMPD---------LSRQLWGKSLQNDVKM 243
+ GS QSS TK E +S + D PD S + L +D K
Sbjct: 251 DSDNGSGTQSSWTKCAVEMDSPQAMSLDQLADSPDSTCAQVIHPKSEICSNRRLPDDFKE 310
Query: 244 QNHEARVNYGQKSLV----------PVTEAQGSEVAACKEANTRAHFDEDTELETHRSDV 293
++ E G +L P+ G + N++ ++ E T R+
Sbjct: 311 KDLEI---GGPGNLYIDHQSSPNERPIKATDG-RCEYPPKNNSKESMMQNLEDPTVRAAD 366
Query: 294 ILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSS-PQLDLSLRRTHPDG-FEN 351
++ S N+ + D + + K P ++ D P L+LSL+R+ G N
Sbjct: 367 LIGSMAKNMDTQEAARAADTPNLPS--KVPEGKDKNKHDKILPSLELSLKRSRSCGDGAN 424
Query: 352 QV---ERKFILRHSNASAFTRY-TNKPSEPQHSSLSGVC----NQQKEFETDSEKNF 400
V E++ +LR SN SAFTRY T+ S + L G C N + +TDS N
Sbjct: 425 TVKADEQQNVLRQSNLSAFTRYHTSTASNQGGTGLVGSCSPHDNSSEAMKTDSTYNM 481
>gi|297746178|emb|CBI16234.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 196/399 (49%), Gaps = 46/399 (11%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
W++FL +L+VLLVE DDSTR +VTALLR SY VTAV +GL+AW++L+ +ID++L
Sbjct: 86 WDSFLPIRSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVL 145
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P ISG LL +M H+ KNIPVIMMSS DS+ V+KC+ +GA D+LVKP+R+NE
Sbjct: 146 TEVVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNE 205
Query: 143 LRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
L+NLWQHVWRR S S + TQ + + K SEN+ S+ + S +
Sbjct: 206 LKNLWQHVWRRCHSSSGSGSESGTQTKKSVKSKSNDESENNTGSSDERDNGSTGPSIRDG 265
Query: 200 IEKGSDEQSSCTKPDFEAESA-------HVEDMPD-------------LSRQLW------ 233
+ GS QSS TK E +S + D PD LS Q W
Sbjct: 266 SDNGSGTQSSWTKRAAEVDSPQPLSPLDQLADAPDSTCPQVIHTKPGTLSNQ-WVHVIET 324
Query: 234 ----GKSLQNDVKMQNHEARVNYGQKSLVPV--TEAQGSEVAACKEANTRAHFDE---DT 284
GK Q D + + V + + S CK N D D
Sbjct: 325 KECQGKDEQPDNVAMGRDLELGVATNPAVQLEYQHEKFSTYPTCKRQNKLPESDSKPFDK 384
Query: 285 ELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLRRT 344
E H S TS C P R + + ++ + G+ P LDLSL+R
Sbjct: 385 EHLEHNS----TSANCTDPQVESR-TFENPNGLSDVSQIKDKGSCETTELPPLDLSLKRL 439
Query: 345 HPDGFENQV--ERKFILRHSNASAFTRYTNKPSEPQHSS 381
G + + ILRHS+ SAF++Y S Q S
Sbjct: 440 RGAGDVGACVHDDRSILRHSDLSAFSKYNTASSANQQKS 478
>gi|225435163|ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
vinifera]
Length = 785
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 195/396 (49%), Gaps = 46/396 (11%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
W++FL +L+VLLVE DDSTR +VTALLR SY VTAV +GL+AW++L+ +ID++L
Sbjct: 86 WDSFLPIRSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVL 145
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P ISG LL +M H+ KNIPVIMMSS DS+ V+KC+ +GA D+LVKP+R+NE
Sbjct: 146 TEVVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNE 205
Query: 143 LRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
L+NLWQHVWRR S S + TQ + + K SEN+ S+ + S +
Sbjct: 206 LKNLWQHVWRRCHSSSGSGSESGTQTKKSVKSKSNDESENNTGSSDERDNGSTGPSIRDG 265
Query: 200 IEKGSDEQSSCTKPDFEAESA-------HVEDMPD-------------LSRQLW------ 233
+ GS QSS TK E +S + D PD LS Q W
Sbjct: 266 SDNGSGTQSSWTKRAAEVDSPQPLSPLDQLADAPDSTCPQVIHTKPGTLSNQ-WVHVIET 324
Query: 234 ----GKSLQNDVKMQNHEARVNYGQKSLVPV--TEAQGSEVAACKEANTRAHFDE---DT 284
GK Q D + + V + + S CK N D D
Sbjct: 325 KECQGKDEQPDNVAMGRDLELGVATNPAVQLEYQHEKFSTYPTCKRQNKLPESDSKPFDK 384
Query: 285 ELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLRRT 344
E H S TS C P R + + ++ + G+ P LDLSL+R
Sbjct: 385 EHLEHNS----TSANCTDPQVESR-TFENPNGLSDVSQIKDKGSCETTELPPLDLSLKRL 439
Query: 345 HPDGFENQV--ERKFILRHSNASAFTRYTNKPSEPQ 378
G + + ILRHS+ SAF++Y S Q
Sbjct: 440 RGAGDVGACVHDDRSILRHSDLSAFSKYNTASSANQ 475
>gi|334715189|gb|AEG90650.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 212/419 (50%), Gaps = 47/419 (11%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FLQ+ + VLLVE+DD TR++V+ALLR Y+V + +G +AW L+ + NID++L
Sbjct: 71 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVL 130
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
EV +P +SG +LL+ +M H ICKNIPVIMMSS D+ +TV+KC+ +GA D+LV P+R+NE
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNE 190
Query: 143 LRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHS---SGYMACIQSK 196
L+NLWQHVWRR S S + Q + G+ K S N++ SN S M
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCGKSKGGKESGNNSGSNDSHDNEADMGLNARD 250
Query: 197 GEFIEKGSDEQSSCTKPDFEAESA------HVEDMPD---------LSRQLWGKSLQNDV 241
G+ QSS TK E +S + D PD S + L +D
Sbjct: 251 DSDNGSGTQAQSSWTKCAVEMDSPQAMSLDQLADSPDSTCAQVIHPKSEICSNRRLPDDF 310
Query: 242 KMQNHEARVNYGQKSLV----------PVTEAQGSEVAACKEANTRAHFDEDTELETHRS 291
K ++ E G +L P+ G + N++ ++ E T R+
Sbjct: 311 KEKDLEI---GGPGNLYIDHQSSPNERPIKATDG-RCEYPPKNNSKESMMQNLEDPTVRA 366
Query: 292 DVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSS-PQLDLSLRRTHPDGF- 349
++ S N+ + D + + K P ++ D P L+LSL+R+ G+
Sbjct: 367 ADLIGSMAKNMDTQEAARAADTPNLPS--KVPEGKDKNKHDKILPSLELSLKRSRSCGYG 424
Query: 350 ENQV---ERKFILRHSNASAFTRY-TNKPSEPQHSSLSGVC----NQQKEFETDSEKNF 400
N V E++ +LR SN SAFTRY T+ S + L G C N + +TDS N
Sbjct: 425 ANTVKADEQQNVLRQSNLSAFTRYHTSTASNQGGTGLVGSCSPHDNSSEAMKTDSTYNM 483
>gi|334715191|gb|AEG90651.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 213/429 (49%), Gaps = 53/429 (12%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FLQ+ + VLLVE+DD TR++V+ALLR Y+V + +G +AW L+ + NID++L
Sbjct: 71 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVL 130
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
EV +P +SG +LL+ +M H ICKNIPVIMMSS D+ +TV+KC+ +GA D+LV P+R+NE
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNE 190
Query: 143 LRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHS---SGYMACIQSK 196
L+NLWQHVWRR S S + Q + G+ K S N++ SN S M
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCGKSKGGKESGNNSGSNDSHDNEADMGLNARD 250
Query: 197 GEFIEKGSDEQSSCTKPDFEAESA------HVEDMPDLS--------------RQLWGKS 236
G+ QSS TK E +S + D PD + R+L G S
Sbjct: 251 DSDNGSGTQAQSSWTKCAVEMDSPQAMSLDQLADSPDSTCAQVIHPKSEICSNRRLPGTS 310
Query: 237 LQNDVKMQN-----HEARVNYGQKSLVPVTEAQGSEVAACKEANTRAHFD---------- 281
+N +K + E + G + + K + R +
Sbjct: 311 NRNCMKQKYTNDDFKEKDLEIGGPGNLYIDHQSSPNERPIKATDGRCEYPPKNNSKESMM 370
Query: 282 EDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSS-PQLDLS 340
++ E T R+ ++ S N+ + D + + K P ++ D P L+LS
Sbjct: 371 QNLEDPTVRAADLIGSMAKNMDTQEAARAADTPNLPS--KVPEGKDKNKHDKILPSLELS 428
Query: 341 LRRTHPDGF-ENQV---ERKFILRHSNASAFTRY-TNKPSEPQHSSLSGVC----NQQKE 391
L+R+ G+ N V E++ +LR SN SAFTRY T+ S + L G C N +
Sbjct: 429 LKRSRSCGYGANTVKADEQQNVLRQSNLSAFTRYHTSTASNQGGTGLVGSCSPHDNSSEA 488
Query: 392 FETDSEKNF 400
+TDS N
Sbjct: 489 MKTDSTYNM 497
>gi|334715201|gb|AEG90656.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 213/429 (49%), Gaps = 53/429 (12%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FLQ+ + VLLVE+DD TR++V+ALLR Y+V + +G +AW L+ + NID++L
Sbjct: 71 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVL 130
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
EV +P +SG +LL+ +M H ICKNIPVIMMSS D+ +TV+KC+ +GA D+LVKP+R+NE
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNE 190
Query: 143 LRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHS---SGYMACIQSK 196
L+NLWQHVWRR S S + Q + G+ K S N++ SN S M
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCGKSKGGKESGNNSGSNDSHDNEADMGLNARD 250
Query: 197 GEFIEKGSDEQSSCTKPDFEAESA------HVEDMPDLS--------------RQLWGKS 236
G+ QSS TK E +S + D PD + R+L G S
Sbjct: 251 DSDNGSGTQAQSSWTKCAVEMDSPQAMSLDQLADSPDSTCAQVIHPKSEICSNRRLPGTS 310
Query: 237 LQNDVKMQN-----HEARVNYGQKSLVPVTEAQGSEVAACKEANTRAHFD---------- 281
+N +K + E + G + + K + R +
Sbjct: 311 NRNCMKQKYTNDDFKEKDLEIGGPGNLYIDHQSSPNERPIKATDGRCEYPPKNNSKESMM 370
Query: 282 EDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSS-PQLDLS 340
++ E T R+ ++ S N+ + D + + K P ++ D P L+LS
Sbjct: 371 QNLEDPTVRAADLIGSMAKNMDTQEAARAADTPNLPS--KVPEGKDKNKHDKILPSLELS 428
Query: 341 LRRTHPDG-FENQV---ERKFILRHSNASAFTRY-TNKPSEPQHSSLSGVC----NQQKE 391
L+R+ G N V E++ +LR SN SAFTRY T+ S + L G C N +
Sbjct: 429 LKRSRSCGDGANTVKADEQQNVLRQSNLSAFTRYHTSTASNQGGTGLVGSCSPHDNSSEA 488
Query: 392 FETDSEKNF 400
+TDS N
Sbjct: 489 MKTDSTYNM 497
>gi|334715199|gb|AEG90655.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 212/419 (50%), Gaps = 47/419 (11%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FLQ+ + VLLVE+DD TR++V+ALLR Y+V + +G +AW L+ + NID++L
Sbjct: 71 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVL 130
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
EV +P +SG +LL+ +M H ICKNIPVIMMSS D+ +TV+KC+ +GA D+LVKP+R+NE
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNE 190
Query: 143 LRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHS---SGYMACIQSK 196
L+NLWQHVWRR S S + Q + G+ K S N++ SN S M
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCGKSKGGKESGNNSGSNDSHDNEADMGLNARD 250
Query: 197 GEFIEKGSDEQSSCTKPDFEAESA------HVEDMPD---------LSRQLWGKSLQNDV 241
G+ QSS TK E +S + D PD S + L +D
Sbjct: 251 DSDNGSGTQAQSSWTKCAVEMDSPQAMSLDQLADSPDSTCAQVIHPKSEICSNRRLPDDF 310
Query: 242 KMQNHEARVNYGQKSLV----------PVTEAQGSEVAACKEANTRAHFDEDTELETHRS 291
K ++ E G +L P+ G + N++ ++ E T R+
Sbjct: 311 KEKDLEI---GGPGNLYIDHQSSPNERPIKATDG-RCEYPPKNNSKESMMQNLEDPTVRA 366
Query: 292 DVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSS-PQLDLSLRRTHPDG-F 349
++ S N+ + D + + K P ++ D P L+LSL+R+ G
Sbjct: 367 ADLIGSMAKNMDTQEAARAADTPNLPS--KVPEGKDKNKHDKILPSLELSLKRSRSCGDG 424
Query: 350 ENQV---ERKFILRHSNASAFTRY-TNKPSEPQHSSLSGVC----NQQKEFETDSEKNF 400
N V E++ +LR SN SAFTRY T+ S + L G C N + +TDS N
Sbjct: 425 ANTVKADEQQNVLRQSNLSAFTRYHTSTASNQGGTGLVGSCSPHDNSSEAMKTDSTYNM 483
>gi|224098134|ref|XP_002311124.1| predicted protein [Populus trichocarpa]
gi|222850944|gb|EEE88491.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 136/217 (62%), Gaps = 12/217 (5%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +L+VLLVE DDSTR +V+ALLR Y VTAV +GL+AW+VL+ +IDL+L
Sbjct: 28 WERFLPLRSLKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVL 87
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG LL+ +M H+ C+NIPVIMMSS DS++ V+KC+ +GA D+LVKP+R+NE
Sbjct: 88 TEVAMPCLSGIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNE 147
Query: 143 LRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
L+ LWQHVWR+ S S + + + + S+ND SN G + + +
Sbjct: 148 LKILWQHVWRKCHSASGSGSESAVRTQKSTKSNGADESDNDTGSNDDDGIGSVGLNARDG 207
Query: 200 IEKGSDEQSSCTKPDFEAESA---------HVEDMPD 227
+ GS QSS TK E ES H+ D PD
Sbjct: 208 SDNGSGTQSSWTKRAVEVESPKPMSPWDQDHLSDPPD 244
>gi|224098126|ref|XP_002311123.1| pseudo response regulator [Populus trichocarpa]
gi|222850943|gb|EEE88490.1| pseudo response regulator [Populus trichocarpa]
Length = 766
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 136/217 (62%), Gaps = 12/217 (5%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +L+VLLVE DDSTR +V+ALLR Y VTAV +GL+AW+VL+ +IDL+L
Sbjct: 83 WERFLPLRSLKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVL 142
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG LL+ +M H+ C+NIPVIMMSS DS++ V+KC+ +GA D+LVKP+R+NE
Sbjct: 143 TEVAMPCLSGIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNE 202
Query: 143 LRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
L+ LWQHVWR+ S S + + + + S+ND SN G + + +
Sbjct: 203 LKILWQHVWRKCHSASGSGSESAVRTQKSTKSNGADESDNDTGSNDDDGIGSVGLNARDG 262
Query: 200 IEKGSDEQSSCTKPDFEAESA---------HVEDMPD 227
+ GS QSS TK E ES H+ D PD
Sbjct: 263 SDNGSGTQSSWTKRAVEVESPKPMSPWDQDHLSDPPD 299
>gi|18424319|ref|NP_568919.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|334188506|ref|NP_001190574.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|52783244|sp|Q9LVG4.1|APRR3_ARATH RecName: Full=Two-component response regulator-like APRR3; AltName:
Full=Pseudo-response regulator 3
gi|8777349|dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
gi|10281008|dbj|BAB13744.1| pseudo-response regulator 3 [Arabidopsis thaliana]
gi|225879138|dbj|BAH30639.1| hypothetical protein [Arabidopsis thaliana]
gi|332009893|gb|AED97276.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009894|gb|AED97277.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 495
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/364 (37%), Positives = 191/364 (52%), Gaps = 34/364 (9%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ KWE +L +L+VLLVE DDSTR IVTALL+ SY VTAVPD L+AW +L+ ID
Sbjct: 52 VVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCID 111
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEVD+P SG LL+ +M H+ KNIPVIMMSS DS+ V+KC+ GA D+LVKP+R
Sbjct: 112 LVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIR 171
Query: 140 RNELRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAA----SNHSSGYMAC 192
+NEL+NLWQHVWRR S S + D+ + + SENDA+ + SG
Sbjct: 172 KNELKNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTQGSENDASISDEHRNESGSSGG 231
Query: 193 IQSKGEFIEKGSDEQSSCTKPDFEAESA----HVEDMPDLSRQLWGKSLQNDVKMQNHEA 248
+ ++ + GS QSS TK + +S D P+ + + +
Sbjct: 232 LSNQDGGSDNGSGTQSSWTKRASDTKSTSPSNQFPDAPNKKGTYENGCAHVNRLKEAEDQ 291
Query: 249 RVNYGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPR 308
+ G S ++ ++ +E E N + LE + D L N V S
Sbjct: 292 KEQIGTGSQTGMSMSKKAEEPGDLEKNAKYSV---QALERNNDDT-LNRSSGNSQVES-- 345
Query: 309 QVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQVERKFILRHSNASAFT 368
K PS+N R D L+ +L++T D + +V + +LRHSN SAF+
Sbjct: 346 ------------KAPSSN---REDLQ-SLEQTLKKTRED-RDYKVGDRSVLRHSNLSAFS 388
Query: 369 RYTN 372
+Y N
Sbjct: 389 KYNN 392
>gi|67005935|gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/364 (36%), Positives = 193/364 (53%), Gaps = 34/364 (9%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ KWE +L +L+VLLVE DDSTR IVTALL+ SY VTAVPD L+AW +L+ ID
Sbjct: 52 VVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCID 111
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEVD+P SG LL+ +M H+ KNIPVIMMSS DS+ V+KC+ GA D+LVKP+R
Sbjct: 112 LVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIR 171
Query: 140 RNELRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAA----SNHSSGYMAC 192
+NEL+NLWQHVWRR S S + D+ + + SENDA+ + SG
Sbjct: 172 KNELKNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTEGSENDASISDEHRNESGSSGG 231
Query: 193 IQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNY 252
+ ++ + GS QSS TK + +S + S G + +N H R+
Sbjct: 232 LSNQDGGSDNGSGTQSSWTKRASDTKSTSPSNQFPESPNKKG-TYENGCA---HVNRLKE 287
Query: 253 GQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETH----RSDVILTSEVCNVPVNSPR 308
+ + + ++ K+A +++ + ++D L N V S
Sbjct: 288 AEDQKEQIGTGSQTGMSMSKKAEEPGDLEKNAKYSVQALERKNDDTLNRSSGNSQVES-- 345
Query: 309 QVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQVERKFILRHSNASAFT 368
K PS+N R D L+ +L++T D + +V + +LRHSN SAF+
Sbjct: 346 ------------KAPSSN---REDLQ-SLEQTLKKTRED-RDYKVGDRSVLRHSNLSAFS 388
Query: 369 RYTN 372
+Y N
Sbjct: 389 KYNN 392
>gi|356545957|ref|XP_003541399.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 749
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 197/387 (50%), Gaps = 48/387 (12%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
I WE FL +L+VLLVE DDSTR +VTALLR SY V +GL+AW++L+ +ID
Sbjct: 69 IICWERFLHIRSLKVLLVEYDDSTRHVVTALLRNCSYEVIDAANGLQAWKILEDLTNHID 128
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
LILTEV +P +SG LL +M H+ KNIPV+MMSS DS+ V+KC+ +GA D+LVKP+R
Sbjct: 129 LILTEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIR 188
Query: 140 RNELRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSK 196
+NEL+NLWQHVWRR S S + TQ + + K +N++ SN + +
Sbjct: 189 KNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSLEKFDNNSGSNGEDDNGSIGLNN 248
Query: 197 GEFIEKGSDEQSSCTKPDFEAES----AHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNY 252
G+ + GS QSS TK E +S +H + + + + + ++ ++
Sbjct: 249 GDGSDNGSGTQSSWTKHAVEVDSPKPVSHWDKIAECPDSTCAQVVHSNAEI--------- 299
Query: 253 GQKSLVPVTEAQGSE-------VAACKEANT-------------RAHFDEDTELETH--R 290
G+ +VP+ + E A K +N R D + E ++ R
Sbjct: 300 GENKVVPLAAKECPEQKEQLVKTAGSKHSNAPDVGPSKFNDQINRGQLDLNCENQSSKLR 359
Query: 291 SDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPS----NNGASRFDSSPQLDLSLRR--- 343
+ S+ +S F + + KP S N + + P L+LSL+R
Sbjct: 360 CKGLSLSDAITSTSDSQMHSGGFEALYK--KPKSSDIENKDTNNDEELPSLELSLKRLRG 417
Query: 344 THPDGFENQVERKFILRHSNASAFTRY 370
G Q +R +LR S+ SAF+RY
Sbjct: 418 VEDAGIAIQDDRN-VLRRSDQSAFSRY 443
>gi|67005937|gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 193/364 (53%), Gaps = 34/364 (9%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ KWE +L +L+VLLVE DDSTR IVTALL+ SY +TAVPD L+AW +L+ ID
Sbjct: 52 VVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEITAVPDVLEAWRILEDEKSCID 111
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEVD+P SG LL+ +M H+ KNIPVIMMSS DS+ V+KC+ GA D+LVKP+R
Sbjct: 112 LVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIR 171
Query: 140 RNELRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAA----SNHSSGYMAC 192
+NEL+NLWQHVWRR S S + D+ + + SENDA+ + SG
Sbjct: 172 KNELKNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTEGSENDASISDEHRNESGSSGG 231
Query: 193 IQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNY 252
+ ++ + GS QSS TK + +S + S G + +N H R+
Sbjct: 232 LSNQDGGSDNGSGTQSSWTKRASDTKSTSPSNQFPESPNKKG-TYENGCA---HVNRLKE 287
Query: 253 GQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETH----RSDVILTSEVCNVPVNSPR 308
+ + + ++ K+A +++ + ++D L N V S
Sbjct: 288 AEDQKEQIGTGSQTGMSMSKKAEEPGDLEKNAKYSVQALERKNDDTLNRSSGNSQVES-- 345
Query: 309 QVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQVERKFILRHSNASAFT 368
K PS+N R D L+ +L++T D + +V + +LRHSN SAF+
Sbjct: 346 ------------KAPSSN---REDLQ-SLEQTLKKTRED-RDYKVGDRSVLRHSNLSAFS 388
Query: 369 RYTN 372
+Y N
Sbjct: 389 KYNN 392
>gi|356536913|ref|XP_003536977.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 747
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 199/387 (51%), Gaps = 48/387 (12%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
I WE FL +L+VLLVE DDSTR +VTALLR SY V +GL+AW++L+ +ID
Sbjct: 67 IICWERFLHIRSLKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHID 126
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P +SG LL +M H+ KNIPV+MMSS DS+ V+KC+ +GA D+LVKP+R
Sbjct: 127 LVLTEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIR 186
Query: 140 RNELRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSK 196
+NEL+NLWQHVWRR S S + TQ + + K S+N++ SN + +
Sbjct: 187 KNELKNLWQHVWRRCHSSSGSGSESGTQTQKSIKSKSLEKSDNNSGSNDEDDNESIGLNN 246
Query: 197 GEFIEKGSDEQSSCTKPDFEAESA-------HVEDMPDLS--------RQLWGKSL---- 237
+ + GS QSS TK E +S + + PD + ++ G +
Sbjct: 247 VDGSDNGSGTQSSWTKRAVEVDSHKPVSQWDQIAECPDSTCAQVVHSNAEMGGNKVVPLA 306
Query: 238 QNDVKMQNHEARVNYG-QKSLVPVTEAQGSEVAACK--EANTRAHFDEDTELETH--RSD 292
D QN + G Q S P +V K E R D + E ++ R
Sbjct: 307 AKDCAEQNEQLVKTAGSQHSNAP-------DVGPSKFSEQINRGQLDLNCENQSSKLRCK 359
Query: 293 VILTSEVCNVPVNSPRQVIDFMSAFNNHKPPS----NNGASRFDSSPQLDLSLRRTHPDG 348
+ S+ +S +F + N KP S N G + + P L+LSL+R G
Sbjct: 360 GLSLSDAITSTCDSQMHSGEFEAL--NKKPKSSDIENKGTNNDEELPSLELSLKRLR--G 415
Query: 349 FEN-----QVERKFILRHSNASAFTRY 370
E+ Q +R +LR S+ SAF+RY
Sbjct: 416 VEDADITIQDDRN-VLRRSDQSAFSRY 441
>gi|224112925|ref|XP_002316333.1| pseudo response regulator [Populus trichocarpa]
gi|222865373|gb|EEF02504.1| pseudo response regulator [Populus trichocarpa]
Length = 763
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 204/407 (50%), Gaps = 62/407 (15%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ WE FL R +L+VLLVE DDSTR +V+ALLR Y TAV +GL+AW++L+ +ID
Sbjct: 77 LVHWERFLPRRSLKVLLVENDDSTRHVVSALLRNCGYEATAVANGLQAWKLLQDLTNHID 136
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P +SG LL+ +M H+ C+NIPVIMMSS DS++ V++C+ +GA D+LVKP+R
Sbjct: 137 LVLTEVAMPCLSGIGLLSNIMSHKTCRNIPVIMMSSHDSMNVVFRCLSKGAVDFLVKPIR 196
Query: 140 RNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
+NEL+ LWQHVWRR S + Q+ +++ +++ ++ S I S G
Sbjct: 197 KNELKILWQHVWRRCHSASGSGSESAVRI-QKSLKSKGADESDNDTDSNDDDDIGSIGLN 255
Query: 200 IEKGSDE----QSSCTKPDFEAESA-------HVEDMPD--------------------- 227
GSD QSS TK E +S + D PD
Sbjct: 256 ARDGSDNGSGTQSSWTKRAVEVDSPKPMLPWDQLADPPDSTFAQVIHSRSEACDNWVPLA 315
Query: 228 -----------LSRQLWGKSLQNDVKMQNHEARVNYGQKSLVPVTEAQGSEVAACKEANT 276
L + GK L+ V + + ++ L + G + K
Sbjct: 316 TTKKFGKQDDELDNFVMGKDLEIGVPRIPNLQHKDLSKEVLTNIAGNNGEKFREIKSEQD 375
Query: 277 RAHFDE----------DTELETHRSDVI-LTSEVCNVPVNSPRQVIDFMSAFNNHKPPSN 325
H ++ +TEL +D+ +++ + N + S +V+D ++ +++K N
Sbjct: 376 SGHLEKGQLELNSEKHNTELRNQGNDLKGVSTNITNPQIES--EVVDISNSLSSNK--KN 431
Query: 326 NGASRFDSSPQLDLSLRRTHP--DGFENQVERKFILRHSNASAFTRY 370
P L+L L+R D + + +R +LRHS+ SAF+RY
Sbjct: 432 EVIYETKEMPSLELVLKRLRDTGDAWASANDRN-VLRHSDLSAFSRY 477
>gi|357121369|ref|XP_003562393.1| PREDICTED: two-component response regulator-like PRR37-like
[Brachypodium distachyon]
Length = 660
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 197/393 (50%), Gaps = 44/393 (11%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ WE ++ + +RVLLVE DDSTRQIVTALLR Y+V +G +AW L+ NID
Sbjct: 9 LCTWEHYIHKKIIRVLLVETDDSTRQIVTALLRHCMYQVIPAENGDQAWARLQDMQDNID 68
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+L+EV +P +SG +LL +M H +CK+IPVIMMSS D++ TV+KC+ GA D+LVKP+R
Sbjct: 69 LVLSEVVMPGLSGISLLEKIMAHNVCKDIPVIMMSSNDAMGTVFKCLSTGAVDFLVKPIR 128
Query: 140 RNELRNLWQHVWRR-------QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMAC 192
+NEL+NLWQHVWRR S S + Q + + K S+N++ SN + ++
Sbjct: 129 KNELKNLWQHVWRRCHSSSGSGSGSGSESGIQTQKCTKSKSANESDNNSGSNDRNDDISM 188
Query: 193 IQSKGEFIEKGSDEQSSCTKPDFEAESA------HVEDMPD------------LSRQLWG 234
+ + + GS QSS TK E +S H D PD + W
Sbjct: 189 GLNARDGSDNGSGTQSSWTKLGVEIDSPQDMSPDHSADPPDSTCAHVIHPKSEICSNRWL 248
Query: 235 KSLQNDV---KMQNHEARVNYGQKSLVPVTEAQGSEVAACKEANTRAHF------DEDTE 285
N + +N+ + G S + + + K + + ++T
Sbjct: 249 PGTNNKKCKKQKENNGKDMEKGAPSNLNADDQSSPNERSIKPTDGWCEYPPSQNNSKETM 308
Query: 286 LETHRSDVILTSEVC-----NVPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSSPQLDLS 340
+E ++L +++ N+ + D ++ ++ K P ++ P L+LS
Sbjct: 309 MENLEEPIVLAADLIGSMAKNMDAQQAARATD--ASNSSSKVPEGKDTDGDNAMPSLELS 366
Query: 341 LRRTHPDGFENQV---ERKFILRHSNASAFTRY 370
L+R G V E + +LR S+ SAFTRY
Sbjct: 367 LKRPRSTGDGGNVVQEEPRNVLRRSDLSAFTRY 399
>gi|108707546|gb|ABF95341.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 745
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 103/134 (76%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
I +WE FL LRVLLVE DDSTRQ+V+ALLRK Y V +GL AW+ L+ +ID
Sbjct: 69 IVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHID 128
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P +SG LL+ + H+ICK+IPVIMMSS DS+ TV+KC+ +GA D+LVKP+R
Sbjct: 129 LVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIR 188
Query: 140 RNELRNLWQHVWRR 153
+NEL+NLWQHVWRR
Sbjct: 189 KNELKNLWQHVWRR 202
>gi|157399678|gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]
Length = 784
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 220/448 (49%), Gaps = 84/448 (18%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ +WE FL +L+VLLVE DDSTR +V+ALLR Y VTA +GL+AW++L+ ++D
Sbjct: 86 LVRWERFLPLRSLKVLLVENDDSTRHVVSALLRNCGYEVTAAENGLQAWKILEDYTTHVD 145
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P +SG LL+ +M H+ CKNIPVIMMSS DS++ V+KC+ +GA D+L KP+R
Sbjct: 146 LVLTEVVMPCLSGIGLLSKIMSHKTCKNIPVIMMSSYDSMNIVFKCLSKGAVDFLAKPIR 205
Query: 140 RNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
+NEL+NLWQHVWR+ S + +V + D +N S +S G
Sbjct: 206 KNELKNLWQHVWRKCHSCSGSGSGSESAVHIRTSTKLKSGDEYNNTGSNDEDDNRSIGLN 265
Query: 200 IEKGSDE----QSSCTKPDFEAESA-------HVEDMPD--------------------- 227
+ GSD+ QSS TK E +S + D PD
Sbjct: 266 LRDGSDDGSGTQSSWTKRAVEVDSPQPISPWEQLADAPDSTCARVFHSRPEAFGNNWVPV 325
Query: 228 --------LSRQLWGKSLQ------NDVKMQNHEARVNYGQKSLVPVTEAQGSEVAACKE 273
+ GK L+ ++++++ A+ G +L +E + SE+ + K+
Sbjct: 326 EHEEHDDEFDNVVMGKDLKIGEPRIPNLQLEDPSAK---GLANLAGTSEDKISEIDSRKD 382
Query: 274 ------ANTRAHFDE-DTELE----------THRSDVILTSEVCNVPVNSPRQVIDFMSA 316
H ++ + ELE T R+D + S V NVP + S
Sbjct: 383 DENLLKRQVELHSEKLNGELEDKASDLMGLTTKRTDPEMESVVFNVP--------NGTSK 434
Query: 317 FNNHKPPSNNGASRFDSSPQLDLSLRRTHPDG-FENQVERKFILRHSNASAFTRYTNKPS 375
+N K + FD + LSL+R G N + +LRHS+ SAF+RYT+ +
Sbjct: 435 VSNMK-----DKAIFDIK-ETPLSLKRLKDVGDTGNSAPDRNVLRHSDLSAFSRYTSATT 488
Query: 376 EPQHSSLSGVCNQQKEFE---TDSEKNF 400
+ G C K E T+S++NF
Sbjct: 489 NQAPTGNVGSCPLGKSSEAAKTESKQNF 516
>gi|24796813|gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
Length = 789
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 103/134 (76%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
I +WE FL LRVLLVE DDSTRQ+V+ALLRK Y V +GL AW+ L+ +ID
Sbjct: 69 IVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHID 128
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P +SG LL+ + H+ICK+IPVIMMSS DS+ TV+KC+ +GA D+LVKP+R
Sbjct: 129 LVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIR 188
Query: 140 RNELRNLWQHVWRR 153
+NEL+NLWQHVWRR
Sbjct: 189 KNELKNLWQHVWRR 202
>gi|158513189|sp|A2XFB7.2|PRR73_ORYSI RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
Length = 767
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 103/134 (76%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
I +WE FL LRVLLVE DDSTRQ+V+ALLRK Y V +GL AW+ L+ +ID
Sbjct: 69 IVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHID 128
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P +SG LL+ + H+ICK+IPVIMMSS DS+ TV+KC+ +GA D+LVKP+R
Sbjct: 129 LVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIR 188
Query: 140 RNELRNLWQHVWRR 153
+NEL+NLWQHVWRR
Sbjct: 189 KNELKNLWQHVWRR 202
>gi|115452319|ref|NP_001049760.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|122247198|sp|Q10N34.1|PRR73_ORYSJ RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
gi|51571879|dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa Japonica Group]
gi|108707543|gb|ABF95338.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
gi|113548231|dbj|BAF11674.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|222624693|gb|EEE58825.1| hypothetical protein OsJ_10396 [Oryza sativa Japonica Group]
Length = 767
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 103/134 (76%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
I +WE FL LRVLLVE DDSTRQ+V+ALLRK Y V +GL AW+ L+ +ID
Sbjct: 69 IVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHID 128
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P +SG LL+ + H+ICK+IPVIMMSS DS+ TV+KC+ +GA D+LVKP+R
Sbjct: 129 LVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIR 188
Query: 140 RNELRNLWQHVWRR 153
+NEL+NLWQHVWRR
Sbjct: 189 KNELKNLWQHVWRR 202
>gi|51571885|dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa Indica Group]
Length = 767
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 103/134 (76%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
I +WE FL LRVLLVE DDSTRQ+V+ALLRK Y V +GL AW+ L+ +ID
Sbjct: 69 IVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHID 128
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P +SG LL+ + H+ICK+IPVIMMSS DS+ TV+KC+ +GA D+LVKP+R
Sbjct: 129 LVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIR 188
Query: 140 RNELRNLWQHVWRR 153
+NEL+NLWQHVWRR
Sbjct: 189 KNELKNLWQHVWRR 202
>gi|357112782|ref|XP_003558186.1| PREDICTED: two-component response regulator-like PRR73-like
[Brachypodium distachyon]
Length = 766
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 106/144 (73%), Gaps = 2/144 (1%)
Query: 10 ELKEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWE 69
E KE G + +WE FL LRVLLVE DD TRQ+V ALLRK Y V + +GL AW+
Sbjct: 62 EQKEQQGR--VIRWERFLPVKTLRVLLVENDDCTRQVVGALLRKCGYEVISAENGLHAWQ 119
Query: 70 VLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRG 129
L+ IDL+LTEV +P +SG +LL+ +M H+ICK+IPVIMMS DS+ TV+KC+ +G
Sbjct: 120 YLEDLQNRIDLVLTEVAMPCLSGISLLSKIMSHKICKDIPVIMMSKNDSMGTVFKCLSKG 179
Query: 130 AADYLVKPVRRNELRNLWQHVWRR 153
A D+LVKP+R+NEL+NLWQH+WRR
Sbjct: 180 AVDFLVKPIRKNELKNLWQHIWRR 203
>gi|226505594|ref|NP_001146641.1| uncharacterized protein LOC100280240 [Zea mays]
gi|219888151|gb|ACL54450.1| unknown [Zea mays]
gi|323388721|gb|ADX60165.1| PseuodARR-B transcription factor [Zea mays]
gi|413956104|gb|AFW88753.1| two-component response regulator-like PRR73 [Zea mays]
Length = 766
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 113/164 (68%), Gaps = 1/164 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL LRVLLVE DDSTRQ+V+ALLRK Y V +GL AW L+ NIDL+L
Sbjct: 74 WERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVL 133
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG LL+ + H+ICK+IPVIMMS+ DS+S V+KC+ +GA D+LVKP+R+NE
Sbjct: 134 TEVFMPCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNE 193
Query: 143 LRNLWQHVWRR-QSSMVSGNETQDESVGQQKIEATSENDAASNH 185
L+NLWQHVWRR SS S + Q + + EN + SNH
Sbjct: 194 LKNLWQHVWRRCHSSSGSESGIQTQKCAKLNTGDEYENGSDSNH 237
>gi|449524812|ref|XP_004169415.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 794
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 130/204 (63%), Gaps = 9/204 (4%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +L+VLLVE DDSTR +VTALLR SY V A +GL AW++L+ +IDL+L
Sbjct: 80 WERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKMLEDLTNHIDLVL 139
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG LL +M H+ KNIPVIMMSS DS+ V+KC+ +GA D+LVKP+R+NE
Sbjct: 140 TEVVMPCLSGIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 199
Query: 143 LRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
L+NLWQHVWRR S S + TQ + + K S+N+ SN +S G
Sbjct: 200 LKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSVEKSDNNTGSNDDEEEDN--ESIGFN 257
Query: 200 IEKGSDE----QSSCTKPDFEAES 219
I GSD+ QSS TK E ES
Sbjct: 258 IADGSDDGSGTQSSWTKQAIEVES 281
>gi|108707544|gb|ABF95339.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 533
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 103/134 (76%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
I +WE FL LRVLLVE DDSTRQ+V+ALLRK Y V +GL AW+ L+ +ID
Sbjct: 69 IVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHID 128
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P +SG LL+ + H+ICK+IPVIMMSS DS+ TV+KC+ +GA D+LVKP+R
Sbjct: 129 LVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIR 188
Query: 140 RNELRNLWQHVWRR 153
+NEL+NLWQHVWRR
Sbjct: 189 KNELKNLWQHVWRR 202
>gi|356539090|ref|XP_003538033.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR3-like [Glycine max]
Length = 792
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 127/200 (63%), Gaps = 3/200 (1%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +++VLLVE DDSTR +V ALLR SY VTAV +GL+AW+VL+ IDL+L
Sbjct: 81 WERFLPVRSIKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLEDPENGIDLVL 140
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG LL +M H+ KNIPVIMMSS DS+ V+KC+ +GA D+LVKP+RRNE
Sbjct: 141 TEVAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNE 200
Query: 143 LRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHS-SGYMACIQSKGEFIE 201
L+NLWQHVWRR S + + +K + NDA N+S S S+ +
Sbjct: 201 LKNLWQHVWRR--CHSSSGSGSESATHTRKFAKSRSNDACENNSDSSDENDYGSRDLSVR 258
Query: 202 KGSDEQSSCTKPDFEAESAH 221
GS QSS TK + S H
Sbjct: 259 DGSGTQSSWTKCLAQVGSPH 278
>gi|413956105|gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 743
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 116/170 (68%), Gaps = 7/170 (4%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL LRVLLVE DDSTRQ+V+ALLRK Y V +GL AW L+ NIDL+L
Sbjct: 74 WERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVL 133
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG LL+ + H+ICK+IPVIMMS+ DS+S V+KC+ +GA D+LVKP+R+NE
Sbjct: 134 TEVFMPCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNE 193
Query: 143 LRNLWQHVWRRQSS-----MVSGNET--QDESVGQQKIEATSENDAASNH 185
L+NLWQHVWRR S + SG+E+ Q + + EN + SNH
Sbjct: 194 LKNLWQHVWRRCHSVSCLFLSSGSESGIQTQKCAKLNTGDEYENGSDSNH 243
>gi|356542579|ref|XP_003539744.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like PRR37-like [Glycine max]
Length = 777
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 130/204 (63%), Gaps = 7/204 (3%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +++VLLVE DDSTR +V ALL+ SY+VTAV +GL+AW+VL+ IDL+L
Sbjct: 64 WERFLPLRSIKVLLVEDDDSTRHVVRALLQNCSYKVTAVSNGLQAWKVLEDPENGIDLVL 123
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG LL +M H+ KNIPVIMMSS DS+ V+KC+ +GA D+LVKP+RRNE
Sbjct: 124 TEVAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNE 183
Query: 143 LRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHS-SGYMACIQSKGEFIE 201
L+NLWQHVWRR S + + +K + NDA N+S S S+G I
Sbjct: 184 LKNLWQHVWRR--CHSSSGSGSESATLTRKFAKSRSNDAYENNSDSSDENDYGSRGLSIR 241
Query: 202 KGSDE----QSSCTKPDFEAESAH 221
GSD QSS TK + S H
Sbjct: 242 DGSDNGSGTQSSWTKCLAQVGSPH 265
>gi|218200317|gb|EEC82744.1| hypothetical protein OsI_27455 [Oryza sativa Indica Group]
Length = 507
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 103/131 (78%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE F+Q+ ++VLLVE+DDSTRQ+V+ALLR Y V +G +AW L+ +IDL+L
Sbjct: 52 WERFIQKKTIKVLLVESDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 111
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG +LL+ +M H ICKNIPVIMMSS D++ TV+KC+ +GA D+LVKP+R+NE
Sbjct: 112 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 171
Query: 143 LRNLWQHVWRR 153
L+NLWQHVWRR
Sbjct: 172 LKNLWQHVWRR 182
>gi|319657095|gb|ADV58926.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657099|gb|ADV58928.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657103|gb|ADV58930.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 200/406 (49%), Gaps = 59/406 (14%)
Query: 18 EGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN 77
+G WE FL + +VLLVE+DDSTR IV+ALLR SY V VP+G++AW++L+
Sbjct: 82 QGRVCWERFLPVGSPKVLLVESDDSTRHIVSALLRNCSYEVVGVPNGIEAWKILEDLSNQ 141
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
IDL+LTEV +SG LL+ +M H+ C+N PVIMMSS DS+ V KC+ +GA D+LVKP
Sbjct: 142 IDLVLTEVVTSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKP 201
Query: 138 VRRNELRNLWQHVWRRQSSMVSGNET----QDESVGQQKIEATSENDAASNHSSGYMACI 193
+R+NEL+NLWQHVWRR S +S+G ++ E S+ND SN +
Sbjct: 202 IRKNELKNLWQHVWRRCHSSSGSGSESCVRNGKSIGSKRAEE-SDNDTDSNEEDDNRSIG 260
Query: 194 QSKGEFIEKGSDEQSSCTKPDFEAESAHVE-------DMPD---------LSRQL---WG 234
+ + GS QSS TK E ES + D PD +S W
Sbjct: 261 LQARDGSDNGSGTQSSWTKRAAEVESPQPQSTWEQATDPPDSTCAQVIYPMSEAFASSWM 320
Query: 235 KSLQNDVKMQNHE-------------------ARVNYGQKSLVPVT---EAQGSEVAACK 272
++ +Q+H+ +R+N K + T E Q S++ +
Sbjct: 321 PGSMQELDVQDHQYDNVPMGKDLEIGVPRISDSRLNGPNKKVKLATTAEENQYSQLDLNQ 380
Query: 273 EANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFN-NHKPP-----SNN 326
E + R+ +E+ E+ + SE +NSP +V + + PP +
Sbjct: 381 ENDGRSFDEENLEMNNDKP----KSEWIKQAMNSPGKVEEHHRGNKVSDAPPEISKIKDK 436
Query: 327 GASRFDSSPQLDLSLRRTH--PDGFENQVERKFILRHSNASAFTRY 370
G + P L LSL+R D N V + I+ S SAFTRY
Sbjct: 437 GMQHVEDMPSLVLSLKRLGDIADTSTN-VSDQNIVGRSELSAFTRY 481
>gi|108707545|gb|ABF95340.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 473
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 103/134 (76%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
I +WE FL LRVLLVE DDSTRQ+V+ALLRK Y V +GL AW+ L+ +ID
Sbjct: 69 IVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHID 128
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P +SG LL+ + H+ICK+IPVIMMSS DS+ TV+KC+ +GA D+LVKP+R
Sbjct: 129 LVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIR 188
Query: 140 RNELRNLWQHVWRR 153
+NEL+NLWQHVWRR
Sbjct: 189 KNELKNLWQHVWRR 202
>gi|334188508|ref|NP_001190575.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009895|gb|AED97278.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 522
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/134 (61%), Positives = 103/134 (76%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ KWE +L +L+VLLVE DDSTR IVTALL+ SY VTAVPD L+AW +L+ ID
Sbjct: 52 VVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCID 111
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEVD+P SG LL+ +M H+ KNIPVIMMSS DS+ V+KC+ GA D+LVKP+R
Sbjct: 112 LVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIR 171
Query: 140 RNELRNLWQHVWRR 153
+NEL+NLWQHVWRR
Sbjct: 172 KNELKNLWQHVWRR 185
>gi|319657093|gb|ADV58925.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657097|gb|ADV58927.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657101|gb|ADV58929.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 200/406 (49%), Gaps = 59/406 (14%)
Query: 18 EGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN 77
+G WE FL + +VLLVE+DDSTR IV+ALLRK SY V VP+G++AW++L+
Sbjct: 82 QGRVCWERFLPVGSPKVLLVESDDSTRHIVSALLRKCSYEVVGVPNGIEAWKILEDLSNQ 141
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
IDL+LTEV +SG LL+ +M H+ C+N PVIMMSS DS+ V KC+ +GA D+LVKP
Sbjct: 142 IDLVLTEVVTSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKP 201
Query: 138 VRRNELRNLWQHVWRRQSSMVSGNET----QDESVGQQKIEATSENDAASNHSSGYMACI 193
+R+NEL+NLWQHVWRR S +S+G ++ E S+ND N +
Sbjct: 202 IRKNELKNLWQHVWRRCHSSSGSGSESCVRNGKSIGSKRAEE-SDNDTDINEEDDNRSIG 260
Query: 194 QSKGEFIEKGSDEQSSCTKPDFEAESAHVE-------DMPD---------LSRQL---WG 234
+ + GS QSS TK E ES + D PD +S W
Sbjct: 261 LQARDGSDNGSGTQSSWTKRAAEVESPQPQSTWEQATDPPDSTCAQVIYPMSEAFASSWM 320
Query: 235 KSLQNDVKMQNHE-------------------ARVNYGQKSLVPVT---EAQGSEVAACK 272
++ Q+H+ +R+N K++ T E Q S++ +
Sbjct: 321 PGSMQELDGQDHQYDNVPMGKDLEIGVPRISDSRLNGPNKTVKLATTAEENQYSQLDLNQ 380
Query: 273 EANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFN-NHKPP-----SNN 326
E + R+ +E+ E+ + SE +NSP +V + + PP +
Sbjct: 381 ENDGRSFDEENLEMNNDKP----KSEWIKQAMNSPGKVEEHRRGNKVSDAPPEISKIKDK 436
Query: 327 GASRFDSSPQLDLSLRRTH--PDGFENQVERKFILRHSNASAFTRY 370
G + P L LSL+R D N V + I+ S SAFTRY
Sbjct: 437 GMQHVEDMPSLVLSLKRLGDIADTSTN-VSDQNIVGRSELSAFTRY 481
>gi|222637749|gb|EEE67881.1| hypothetical protein OsJ_25707 [Oryza sativa Japonica Group]
Length = 661
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 103/131 (78%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE F+Q+ ++VLLV++DDSTRQ+V+ALLR Y V +G +AW L+ +IDL+L
Sbjct: 52 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 111
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG +LL+ +M H ICKNIPVIMMSS D++ TV+KC+ +GA D+LVKP+R+NE
Sbjct: 112 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 171
Query: 143 LRNLWQHVWRR 153
L+NLWQHVWRR
Sbjct: 172 LKNLWQHVWRR 182
>gi|51571883|dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa Indica Group]
Length = 704
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 103/131 (78%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE F+Q+ ++VLLV++DDSTRQ+V+ALLR Y V +G +AW L+ +IDL+L
Sbjct: 53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 112
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG +LL+ +M H ICKNIPVIMMSS D++ TV+KC+ +GA D+LVKP+R+NE
Sbjct: 113 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 172
Query: 143 LRNLWQHVWRR 153
L+NLWQHVWRR
Sbjct: 173 LKNLWQHVWRR 183
>gi|51571877|dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa Japonica Group]
Length = 742
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 103/131 (78%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE F+Q+ ++VLLV++DDSTRQ+V+ALLR Y V +G +AW L+ +IDL+L
Sbjct: 53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 112
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG +LL+ +M H ICKNIPVIMMSS D++ TV+KC+ +GA D+LVKP+R+NE
Sbjct: 113 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 172
Query: 143 LRNLWQHVWRR 153
L+NLWQHVWRR
Sbjct: 173 LKNLWQHVWRR 183
>gi|115474289|ref|NP_001060743.1| Os07g0695100 [Oryza sativa Japonica Group]
gi|122166891|sp|Q0D3B6.1|PRR37_ORYSJ RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
gi|34394035|dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
gi|113612279|dbj|BAF22657.1| Os07g0695100 [Oryza sativa Japonica Group]
Length = 742
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 103/131 (78%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE F+Q+ ++VLLV++DDSTRQ+V+ALLR Y V +G +AW L+ +IDL+L
Sbjct: 53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 112
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG +LL+ +M H ICKNIPVIMMSS D++ TV+KC+ +GA D+LVKP+R+NE
Sbjct: 113 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 172
Query: 143 LRNLWQHVWRR 153
L+NLWQHVWRR
Sbjct: 173 LKNLWQHVWRR 183
>gi|355469068|gb|ACU42263.2| pseudo response regulator 37 [Pisum sativum]
Length = 792
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/468 (31%), Positives = 219/468 (46%), Gaps = 74/468 (15%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ WE FL +++VLLV+ DDSTR +V ALLR Y VTAV +GL+AW+ L+ ID
Sbjct: 74 VTYWERFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRID 133
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P +SG LL +M H KNIPVIMMSS DS+ V+KC+ +GAAD+LVKP+R
Sbjct: 134 LVLTEVAMPFVSGIGLLCKIMSHIALKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIR 193
Query: 140 RNELRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSK 196
RNEL+NLWQHVWRR S S + T + + +N++ S+ + Y + S
Sbjct: 194 RNELKNLWQHVWRRCHSSSDSGSESGTNTRKFAKSRSICAYDNNSGSSDENDYGSRGLSV 253
Query: 197 GEFIEKGSDEQSSCT----------------KPD---------------------FEAES 219
+ +KGS QSS T PD E E
Sbjct: 254 RDGSDKGSGTQSSWTTNLAQVSSSPRKQSHDTPDSTCAQVVLTKSENISSKWVQATEKEC 313
Query: 220 AHVEDMPD---LSRQL-WGKSLQNDVKMQNHEARVNYGQKSLVPVTEAQGSEV-----AA 270
+ D PD + + L G SL + K + E N K + +++ G ++ +
Sbjct: 314 HNPIDHPDDIAMGKDLAMGISLNMEEKHPHEELSNNPMCKGVNKMSDIDGMQLNKGHSSV 373
Query: 271 CKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNNGASR 330
C++ + D+ E +V +T + + + S F K S
Sbjct: 374 CEKVQPEENSDKTRMKENQDMNVGVTDSSSSQAESRDLNTSNGFSGFAKSK------TSC 427
Query: 331 FDSSPQLDLSLRRT-------HPDGFENQVERKFILRHSNASAFTRYTNKPSEPQHSSLS 383
F P L+L+L+R H G E V LRHS+ SAF++Y + +
Sbjct: 428 FKQHPSLELTLKRMGEVKDAEHVTGDECNV-----LRHSDLSAFSKYNTASAYQAQTGNV 482
Query: 384 GVC----NQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSLAT 427
G C N T++ +NF+++ N+ P + ++N LA+
Sbjct: 483 GSCSALDNSSVAPNTETIQNFTSL---SNATLPNQQSNGSNNINDLAS 527
>gi|158513660|sp|A2YQ93.2|PRR37_ORYSI RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
Length = 742
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 103/131 (78%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE F+Q+ ++VLLV++DDSTRQ+V+ALLR Y V +G +AW L+ +IDL+L
Sbjct: 53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 112
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG +LL+ +M H ICKNIPVIMMSS D++ TV+KC+ +GA D+LVKP+R+NE
Sbjct: 113 TEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNE 172
Query: 143 LRNLWQHVWRR 153
L+NLWQHVWRR
Sbjct: 173 LKNLWQHVWRR 183
>gi|255928914|gb|ACU42264.1| pseudo response regulator 37 [Pisum sativum]
Length = 780
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/468 (31%), Positives = 219/468 (46%), Gaps = 74/468 (15%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ WE FL +++VLLV+ DDSTR +V ALLR Y VTAV +GL+AW+ L+ ID
Sbjct: 62 VTYWERFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRID 121
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P +SG LL +M H KNIPVIMMSS DS+ V+KC+ +GAAD+LVKP+R
Sbjct: 122 LVLTEVAMPFVSGIGLLCKIMSHIALKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIR 181
Query: 140 RNELRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSK 196
RNEL+NLWQHVWRR S S + T + + +N++ S+ + Y + S
Sbjct: 182 RNELKNLWQHVWRRCHSSSDSGSESGTNTRKFAKSRSICAYDNNSGSSDENDYGSRGLSV 241
Query: 197 GEFIEKGSDEQSSCT----------------KPD---------------------FEAES 219
+ +KGS QSS T PD E E
Sbjct: 242 RDGSDKGSGTQSSWTTNLAQVSSSPRKQSHDTPDSTCAQVVLTKSENISSKWVQATEKEC 301
Query: 220 AHVEDMPD---LSRQL-WGKSLQNDVKMQNHEARVNYGQKSLVPVTEAQGSEV-----AA 270
+ D PD + + L G SL + K + E N K + +++ G ++ +
Sbjct: 302 HNPIDHPDDIAMGKDLAMGISLNMEEKHPHEELSNNPMCKGVNKMSDIDGMQLNKGHSSV 361
Query: 271 CKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNNGASR 330
C++ + D+ E +V +T + + + S F K S
Sbjct: 362 CEKVQPEENSDKTRMKENQDMNVGVTDSSSSQAESRDLNTSNGFSGFAKSK------TSC 415
Query: 331 FDSSPQLDLSLRRT-------HPDGFENQVERKFILRHSNASAFTRYTNKPSEPQHSSLS 383
F P L+L+L+R H G E V LRHS+ SAF++Y + +
Sbjct: 416 FKQHPSLELTLKRMGEVKDAEHVTGDECNV-----LRHSDLSAFSKYNTASAYQAQTGNV 470
Query: 384 GVC----NQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSLAT 427
G C N T++ +NF+++ N+ P + ++N LA+
Sbjct: 471 GSCSALDNSSVAPNTETIQNFTSL---SNATLPNQQSNGSNNINDLAS 515
>gi|195604808|gb|ACG24234.1| two-component response regulator-like PRR73 [Zea mays]
Length = 765
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL LRVLLVE DDSTRQ+V+ALLRK Y V +GL AW L+ NIDL+L
Sbjct: 73 WERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVL 132
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV + +SG LL+ + H+ICK+IPVIMMS+ DS+S V+KC+ +GA D+LVKP+R+NE
Sbjct: 133 TEVFMTCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNE 192
Query: 143 LRNLWQHVWRR-QSSMVSGNETQDESVGQQKIEATSENDAASNH 185
L+NLWQHVWRR SS S + Q + + EN + SNH
Sbjct: 193 LKNLWQHVWRRCHSSSGSESGIQTQKCAKLNTGDEYENGSDSNH 236
>gi|84570625|dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 101/131 (77%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +L+VLLVE DDSTR +V ALLR SY VTAV +GL+AW+VL+ N+D++L
Sbjct: 68 WERFLPVKSLKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVLENLSNNVDIVL 127
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +PS+SG LL +M H K IPVIMMSS DS+ V+KC+ +GA D+LVKP+R+NE
Sbjct: 128 TEVVMPSLSGIGLLDKIMSHITLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNE 187
Query: 143 LRNLWQHVWRR 153
L+NLWQHVWRR
Sbjct: 188 LKNLWQHVWRR 198
>gi|449448936|ref|XP_004142221.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 797
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 129/204 (63%), Gaps = 9/204 (4%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +L+VLLVE DDSTR +VTALL SY V A +GL AW++L+ +IDL+L
Sbjct: 80 WERFLHLRSLKVLLVENDDSTRHLVTALLCNCSYEVIAAANGLHAWKMLEDLTNHIDLVL 139
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG LL +M H+ KNIPVIMMSS DS+ V+KC+ +GA D+LVKP+R+NE
Sbjct: 140 TEVVMPCLSGIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 199
Query: 143 LRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
L+NLWQHVWRR S S + TQ + + K S+N+ SN +S G
Sbjct: 200 LKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSVEKSDNNTGSNDDEEEDN--ESIGFN 257
Query: 200 IEKGSDE----QSSCTKPDFEAES 219
I GSD+ QSS TK E ES
Sbjct: 258 IADGSDDGSGTQSSWTKQAIEVES 281
>gi|281308384|gb|ADA58340.1| pseudo-response regulator 3 [Brassica rapa]
Length = 492
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 102/134 (76%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ WE +L +L+VLLVE DDSTR IVTALL+ SY VTAVPD L+AW+VL+ ID
Sbjct: 52 VVNWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWKVLEDENSCID 111
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P SG LL+ +M H+ KNIPVIMMSS DS+ V+KC+ GA D+LVKP+R
Sbjct: 112 LVLTEVVMPVNSGTGLLSKIMSHQTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIR 171
Query: 140 RNELRNLWQHVWRR 153
+NEL+NLWQHVWRR
Sbjct: 172 KNELKNLWQHVWRR 185
>gi|255582079|ref|XP_002531836.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223528532|gb|EEF30556.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 807
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 129/197 (65%), Gaps = 4/197 (2%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ +WE FL +L+VLLVE DDSTR +V+ALLR SY V AV +G +AW++L+ + D
Sbjct: 62 VIRWERFLPVRSLKVLLVENDDSTRHVVSALLRNCSYEVNAVANGFQAWKILEDMNNHTD 121
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P +SG LL + H+ +NIPVIMMSS DS+ V+KC+ +GA D+LVKP+R
Sbjct: 122 LVLTEVVMPILSGIGLLCKIRNHKTLRNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIR 181
Query: 140 RNELRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHSSG-YMACIQS 195
+NEL+NLWQHVWRR S S + TQ + + K SEN++ S+ G Y + S
Sbjct: 182 KNELKNLWQHVWRRCHSSSGSGSESGTQTKKSAKTKSNEESENNSDSSDELGDYGSNGPS 241
Query: 196 KGEFIEKGSDEQSSCTK 212
+ + GS QSS TK
Sbjct: 242 NRDGSDNGSGTQSSWTK 258
>gi|326522564|dbj|BAK07744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 759
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 129/226 (57%), Gaps = 22/226 (9%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ +WE FL LRVLLVE DD TR +V ALLRK Y V + +GL AW+ L+ ID
Sbjct: 71 VIRWEKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRID 130
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV +P +SG LL+ + H ICK IPVIMMS DS+STV+KC+ +GA D+LVKP+R
Sbjct: 131 LVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIR 190
Query: 140 RNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQ----- 194
+NEL+ LWQH+WRR S SG+E+ + QK D + +S G
Sbjct: 191 KNELKTLWQHIWRRCHSS-SGSES---GIHIQKCSKPKTGDEYAKNSGGSHDDDDDDDAD 246
Query: 195 ---SKGEFIEKGSDE----QSSCTKPDFEAESA------HVEDMPD 227
S G GSD QSS TK E +S H+ D PD
Sbjct: 247 DDFSVGPNARDGSDNGSGTQSSWTKRAVEIDSPQLVSSDHLSDSPD 292
>gi|414888254|tpg|DAA64268.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 177
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 80/134 (59%), Positives = 107/134 (79%)
Query: 21 AKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDL 80
A WE FL + L VLLVE+DDSTRQ+V+ALLR Y+V + +G +AW L+ + NIDL
Sbjct: 40 ACWERFLLKETLNVLLVESDDSTRQVVSALLRCCMYQVISAENGQQAWAYLEDKRNNIDL 99
Query: 81 ILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRR 140
+LTEV +P +SG +LL+ +M H ICKNIPVIMMSS D++STV+KC+ +GA D+LVKP+R+
Sbjct: 100 VLTEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSSDAMSTVFKCLSKGAVDFLVKPIRK 159
Query: 141 NELRNLWQHVWRRQ 154
NEL+NLWQHVWR++
Sbjct: 160 NELKNLWQHVWRQR 173
>gi|84570631|dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 78/131 (59%), Positives = 100/131 (76%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +L+VLLVE DDSTR +V ALLR SY VTAV +GL+AW+ L+ N+D++L
Sbjct: 68 WERFLPVKSLKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFLENLSNNVDIVL 127
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +PS++G LL +M H K IPVIMMSS DS+ V+KC+ +GA D+LVKP+R+NE
Sbjct: 128 TEVVMPSLTGIGLLDKIMSHMTLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNE 187
Query: 143 LRNLWQHVWRR 153
L+NLWQHVWRR
Sbjct: 188 LKNLWQHVWRR 198
>gi|334715197|gb|AEG90654.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 291
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FLQ+ + VLLVE+DD TR++V+ALLR Y+V + +G +AW L+ + NID++L
Sbjct: 71 WERFLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVL 130
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
EV +P +SG +LL+ +M H ICKNIPVIMMSS D+ +TV+KC+ +GA D+LV P+R+NE
Sbjct: 131 IEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNE 190
Query: 143 LRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHS 186
L+NLWQHVWRR S S + Q + G+ K S N++ SN S
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCGKSKGGKESGNNSGSNDS 237
>gi|255568450|ref|XP_002525199.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223535496|gb|EEF37165.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 762
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 124/201 (61%), Gaps = 5/201 (2%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +L+VLLVE D STR +VTALLR SY V +GL+AW +L+ IDL+L
Sbjct: 79 WERFLHLGSLKVLLVENDYSTRHVVTALLRNCSYEVIEATNGLQAWRILEDLTNQIDLVL 138
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG LL +M H+ KN+PVIMMSS DS+ V+KC+ +GA D+LVKP+R+NE
Sbjct: 139 TEVVMPCLSGIGLLYKIMSHKTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 198
Query: 143 LRNLWQHVWRR----QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGE 198
L+NLWQHVWRR S +SV + +E S ND S+ + + G+
Sbjct: 199 LKNLWQHVWRRCHSSSGSGSESGTETQKSVKSKSVEK-SGNDTGSSDEDDNGSIGLNVGD 257
Query: 199 FIEKGSDEQSSCTKPDFEAES 219
+ GS QSS TK E +S
Sbjct: 258 GSDNGSGTQSSWTKQAVEVDS 278
>gi|118638651|gb|ABL09481.1| pseudo-response regulator [Aegilops tauschii]
Length = 661
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 196/392 (50%), Gaps = 47/392 (11%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+VTALLR Y+V +G +AW L+ NIDL+L
Sbjct: 23 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 82
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 83 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 142
Query: 142 ELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIE 201
EL+NLW HVWRR S ++ QK S++ SN++S S G
Sbjct: 143 ELKNLWAHVWRRSHSSSGSGSGSGSAIQTQKC-TKSKSGDDSNNNSNNRNDDASMGLNAR 201
Query: 202 KGSDE----QSSCTKPDFEAESAH------VEDMPD--------LSRQLWGKSLQ--NDV 241
GSD QSS TK E +S D PD L ++ L+ N+
Sbjct: 202 DGSDNGSGTQSSWTKRAVEIDSPQDMSPDQSVDPPDSTCAHVSHLKSEICSNRLRGTNNK 261
Query: 242 KMQN-HEARVNYGQKSL---VPV---TEAQGS--EVAACKEANTRAHF-----DEDTELE 287
K Q E + K L P TE Q S E + N R + DT +E
Sbjct: 262 KCQKPKETNAEFKGKELEIGAPGNLNTEDQSSPNESSVKPTDNGRCEYLPQNNSNDTVME 321
Query: 288 TH-----RSDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLR 342
R+ ++ S N+ + ID + + + P R ++ P L+LSL+
Sbjct: 322 NSDEPIVRAADLIGSMAKNMDAQQAARAIDAPNC--SSQAPQGKDTDRENAMPYLELSLK 379
Query: 343 RTH--PDGFEN--QVERKFILRHSNASAFTRY 370
R+ DG + Q E++ ++R S+ SAFTRY
Sbjct: 380 RSRSTADGADAAIQEEQRNVVRRSDLSAFTRY 411
>gi|297796967|ref|XP_002866368.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
gi|297312203|gb|EFH42627.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
Length = 498
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 128/366 (34%), Positives = 190/366 (51%), Gaps = 38/366 (10%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ KWE +L +L+VLLVE DDSTR IVTALL+ SY V AV D L+AW +L+ ID
Sbjct: 54 VVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVNAVSDVLEAWRILEDEKSCID 113
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
L+LTEV LP SG LL+ +M H+ KNIPVIMMSS DS+ V+KC+ GA D+LVKP+R
Sbjct: 114 LVLTEVVLPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIR 173
Query: 140 RNELRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNH----SSGYMAC 192
+NEL+NLWQHVWR+ S S + QD+ + + SENDA+ + G
Sbjct: 174 KNELKNLWQHVWRKCHSSSGSGSESGIQDKKSVKPESTEGSENDASISDELETEDGSSGG 233
Query: 193 IQSKGEFIEKGSDEQSSCTKPDFEAESAHVED-MPDLSRQLWGKSLQNDVKMQNHEARVN 251
+ ++ + GS QSS TK + +S + +PD + ++ +N N V
Sbjct: 234 LSNRDGGSDNGSGTQSSWTKRASDTKSTSPSNQLPDAPNK--KETYENGSVHVNKPKEVE 291
Query: 252 YGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTE-----LETHRSDVILTSEVCNVPVNS 306
QK + G ++ K+A ++D + LE + D++ S
Sbjct: 292 -DQKEQIGTGSQTG--MSMSKKAEEHGDLEKDAKYSVQALERNNDDMLNRSS-------- 340
Query: 307 PRQVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQVERKFILRHSNASA 366
N + S +S + L+ +L++ G + ++ + +LRHSN S
Sbjct: 341 -----------GNSQVESKTSSSNREVLQSLEQTLKKPREAG-DYRIGDQSVLRHSNHSP 388
Query: 367 FTRYTN 372
F++Y N
Sbjct: 389 FSKYNN 394
>gi|218192572|gb|EEC74999.1| hypothetical protein OsI_11061 [Oryza sativa Indica Group]
Length = 780
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/147 (55%), Positives = 103/147 (70%), Gaps = 13/147 (8%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYR-------------VTAVPDGLK 66
I +WE FL LRVLLVE DDSTRQ+V+ALLRK Y V +GL
Sbjct: 69 IVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEDSRGFCASRFPSAVIPAENGLH 128
Query: 67 AWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCM 126
AW+ L+ +IDL+LTEV +P +SG LL+ + H+ICK+IPVIMMSS DS+ TV+KC+
Sbjct: 129 AWQCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCL 188
Query: 127 MRGAADYLVKPVRRNELRNLWQHVWRR 153
+GA D+LVKP+R+NEL+NLWQHVWRR
Sbjct: 189 SKGAVDFLVKPIRKNELKNLWQHVWRR 215
>gi|319657108|gb|ADV58932.1| pseudo-response regulator 7-like protein [Beta vulgaris subsp.
vulgaris]
Length = 718
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 197/387 (50%), Gaps = 35/387 (9%)
Query: 18 EGIAK-WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR 76
+GIA WE FL ++RVLLVE DDSTR +V ALLR Y V +GL+AW++L+
Sbjct: 69 QGIAVCWERFLHVRSVRVLLVENDDSTRHVVAALLRNCCYEVVEASNGLQAWKILEDIEN 128
Query: 77 NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
IDL+LTEV +P +SG ALL +M H+ KN+PV+MMSS DS+ V+KC+ +GA D+LVK
Sbjct: 129 RIDLVLTEVVMPCVSGIALLFKIMSHKSRKNVPVVMMSSHDSMGLVFKCLSKGAVDFLVK 188
Query: 137 PVRRNELRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACI 193
P+R+NEL+NLWQH+WRR S + TQ + + K A S N++ SN +
Sbjct: 189 PIRKNELKNLWQHLWRRCHSSCGSGSESGTQTQKSVKSKNAAKSGNNSGSNDEEYNGSPA 248
Query: 194 QSKGEFIEKGSDEQSSCTKPDFEAE------SAHVEDMPDLSRQLWGKSLQNDVK----- 242
+ + + GS QSS K E + +H+ ++P + + + K
Sbjct: 249 LNLEDGSDHGSGTQSSWRKQAAEDQVDSPRLVSHLNEVPACPDSTCAQVINPNAKPSGSK 308
Query: 243 -MQNHEARVNYGQKSLVPVTE-AQGSEVAACKEANTRAHFD-----EDTELETH------ 289
+ + QK +TE +G ++A K ++ + E T ++ H
Sbjct: 309 LLSMTAPKECIEQKQPPEITELGKGQDIAMLKNSDLQPKLSVQIPTELTCMDQHSVPKVD 368
Query: 290 --RSDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNN----GASRFDSSPQLDLSLRR 343
+ D + + V + S ++ ++ KP SN+ G S+ Q LR
Sbjct: 369 SSQYDEQIDNRVRELHAGSNESIVCAIANKFTKKPDSNDKGTGGNKELLSTDQGLKRLRG 428
Query: 344 THPDGFENQVERKFILRHSNASAFTRY 370
+ G Q ER +LR S +SAF+RY
Sbjct: 429 AYDVGKAVQDERN-VLRRSESSAFSRY 454
>gi|302796211|ref|XP_002979868.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
gi|300152628|gb|EFJ19270.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
Length = 865
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 187/370 (50%), Gaps = 33/370 (8%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
E Q L+VLLVE DDSTR +V ALLR Y VT GL+AWE+L+ R ++DL+LT
Sbjct: 101 ENAFQHHHLKVLLVEDDDSTRHVVAALLRNCGYEVTPAASGLQAWEILETRSSSVDLVLT 160
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
++ +P +SG LL +M + K IPV+MMS DS+ V KC+ +GA D+LVKPVR+NEL
Sbjct: 161 DLMMPRLSGIELLGKIMSRDSPKRIPVVMMSCLDSMDVVLKCLSKGAVDFLVKPVRKNEL 220
Query: 144 RNLWQHVWR---RQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFI 200
+NLWQH WR S SG+ET + G S++ S H SG G
Sbjct: 221 KNLWQHFWRMCLSSSGSGSGSETGKAAGGNN----NSQSYGGSEHGSGLNV-----GGGS 271
Query: 201 EKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSLVPV 260
+ GS QSS TK E +S E++ + + + ++ + V +KS
Sbjct: 272 DNGSGTQSSWTKKPVEVQSHATEEL------VLQRDKREEIDIDRDCGEVAMAEKSRT-A 324
Query: 261 TEAQGSEVAACKE--ANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFN 318
++ G + K +++ F+ L C + S I +AF
Sbjct: 325 SQLLGGHLLGAKSTISSSITIFERAPSLAAGGKSGGGGEPSCKDLLAS----IQKQAAF- 379
Query: 319 NHKPPSNNGASRFDSSPQ----LDLSLRRTHPDGFEN-QVERKFILRHSNASAFTRYTNK 373
+ P S+ +S P L+LSL+RT G ++ E+K +L HS SAF+RY+N
Sbjct: 380 --EQPGEKLDSKDNSVPSNDSALELSLKRTRVKGPDDGDGEQKRLLHHSGGSAFSRYSNN 437
Query: 374 PSEPQHSSLS 383
P +S+LS
Sbjct: 438 PLLQHNSTLS 447
>gi|456359240|dbj|BAM93449.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359248|dbj|BAM93453.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+VTALLR Y+V +G +AW L+ NIDL+L
Sbjct: 27 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 86
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 87 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 146
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 147 ELKNLWAHVWRR 158
>gi|456359228|dbj|BAM93443.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359236|dbj|BAM93447.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359238|dbj|BAM93448.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359242|dbj|BAM93450.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359260|dbj|BAM93459.1| pseudo-response regulator [Triticum dicoccoides]
Length = 662
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+VTALLR Y+V +G +AW L+ NIDL+L
Sbjct: 27 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 86
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 87 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 146
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 147 ELKNLWAHVWRR 158
>gi|456359230|dbj|BAM93444.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359232|dbj|BAM93445.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359234|dbj|BAM93446.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+VTALLR Y+V +G +AW L+ NIDL+L
Sbjct: 27 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 86
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 87 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 146
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 147 ELKNLWAHVWRR 158
>gi|312283377|dbj|BAJ34554.1| unnamed protein product [Thellungiella halophila]
Length = 728
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 134/212 (63%), Gaps = 17/212 (8%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +RVLLVE DD TR IVTALLR SY V V +G++AW+VL+ +ID++L
Sbjct: 75 WERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVL 134
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG +LL ++ H+ +NIPVIMMSS DS+ V+KC+ +GA D+LVKP+R+NE
Sbjct: 135 TEVVMPYLSGISLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 194
Query: 143 LRNLWQHVWRR------QSSMVSGNETQDESVGQQKIEATSENDAASN--HSSGYMACIQ 194
L+ LWQHVWRR S ++TQ +SV + I S+ND+ S+ + +G +
Sbjct: 195 LKILWQHVWRRCQSSSGSGSESGTHQTQ-KSVKSKSIRK-SDNDSGSSGENENGSIGLNA 252
Query: 195 SKGEFIEKGSDEQSSCTKPDFEAESAHVEDMP 226
S G GS QSS TK E V+D P
Sbjct: 253 SDGS--SDGSGTQSSWTKKAVE-----VDDSP 277
>gi|220030924|gb|ACL78627.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030974|gb|ACL78652.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL+ +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLSRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|168065344|ref|XP_001784613.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
gi|162663845|gb|EDQ50588.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
Length = 425
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 108/150 (72%), Gaps = 5/150 (3%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE+FL + +LR+LLVE DD+TR +V ALLR Y VTAV +G AW +L+ N DL+L
Sbjct: 3 WESFLLKRSLRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVL 62
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+V +P +SG LL+ +M+ E C+ +P+++MSS DS+ V++C+ +GA DYLVKPVR+NE
Sbjct: 63 TDVVMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNE 122
Query: 143 LRNLWQHVWRRQSSMVSGNETQDESVGQQK 172
LRNLWQHVWR+ S+ Q VG+Q+
Sbjct: 123 LRNLWQHVWRKCHSL-----DQQPDVGRQQ 147
>gi|281308388|gb|ADA58342.1| pseudo-response regulator 7a [Brassica rapa]
Length = 725
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 134/220 (60%), Gaps = 14/220 (6%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +RVLLVE DD TR IVTALLR SY V V +G++AW+VL+ +ID++L
Sbjct: 86 WERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVL 145
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG LL ++ H+ +NIPVIMMSS DS+ ++KC+ +GA D+LVKP+R+NE
Sbjct: 146 TEVVMPYLSGVGLLCKILNHKSRRNIPVIMMSSHDSMGLIFKCLSKGAVDFLVKPIRKNE 205
Query: 143 LRNLWQHVWRR------QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSK 196
L+ LWQHVWRR S ++TQ + I++ +++ + + +G + S
Sbjct: 206 LKILWQHVWRRCQSSSGSGSESGTHQTQKSVKSKNIIKSDNDSGHSGENENGSIGLNASD 265
Query: 197 GEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKS 236
G GS QSS TK E V+D P + LW ++
Sbjct: 266 GS--SDGSGAQSSWTKKAVE-----VDDSP-RAVSLWDRA 297
>gi|220030862|gb|ACL78596.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031064|gb|ACL78697.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030726|gb|ACL78528.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030962|gb|ACL78646.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220031158|gb|ACL78744.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220031050|gb|ACL78690.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031058|gb|ACL78694.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031066|gb|ACL78698.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031068|gb|ACL78699.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031070|gb|ACL78700.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031076|gb|ACL78703.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031078|gb|ACL78704.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031094|gb|ACL78712.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031096|gb|ACL78713.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031100|gb|ACL78715.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031102|gb|ACL78716.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031104|gb|ACL78717.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031106|gb|ACL78718.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031108|gb|ACL78719.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031112|gb|ACL78721.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031136|gb|ACL78733.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031146|gb|ACL78738.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031148|gb|ACL78739.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031150|gb|ACL78740.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031156|gb|ACL78743.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031160|gb|ACL78745.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031162|gb|ACL78746.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031180|gb|ACL78755.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031198|gb|ACL78764.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030960|gb|ACL78645.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030958|gb|ACL78644.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030954|gb|ACL78642.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030956|gb|ACL78643.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030930|gb|ACL78630.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030932|gb|ACL78631.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030946|gb|ACL78638.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030950|gb|ACL78640.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030890|gb|ACL78610.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030942|gb|ACL78636.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030964|gb|ACL78647.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030948|gb|ACL78639.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030866|gb|ACL78598.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030868|gb|ACL78599.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030872|gb|ACL78601.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030878|gb|ACL78604.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030940|gb|ACL78635.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031062|gb|ACL78696.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030860|gb|ACL78595.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031184|gb|ACL78757.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030856|gb|ACL78593.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030870|gb|ACL78600.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030876|gb|ACL78603.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030898|gb|ACL78614.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030938|gb|ACL78634.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030944|gb|ACL78637.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030968|gb|ACL78649.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030980|gb|ACL78655.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030982|gb|ACL78656.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030988|gb|ACL78659.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030990|gb|ACL78660.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030854|gb|ACL78592.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030966|gb|ACL78648.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030926|gb|ACL78628.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030952|gb|ACL78641.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031038|gb|ACL78684.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030918|gb|ACL78624.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030934|gb|ACL78632.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030996|gb|ACL78663.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031044|gb|ACL78687.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031072|gb|ACL78701.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031074|gb|ACL78702.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031080|gb|ACL78705.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031082|gb|ACL78706.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031086|gb|ACL78708.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031088|gb|ACL78709.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031110|gb|ACL78720.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031138|gb|ACL78734.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031140|gb|ACL78735.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031142|gb|ACL78736.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031144|gb|ACL78737.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031164|gb|ACL78747.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031166|gb|ACL78748.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031176|gb|ACL78753.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031178|gb|ACL78754.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031182|gb|ACL78756.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031186|gb|ACL78758.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031188|gb|ACL78759.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030678|gb|ACL78504.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030682|gb|ACL78506.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030684|gb|ACL78507.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030712|gb|ACL78521.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030780|gb|ACL78555.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030836|gb|ACL78583.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030840|gb|ACL78585.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220031098|gb|ACL78714.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220031040|gb|ACL78685.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030864|gb|ACL78597.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030984|gb|ACL78657.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030986|gb|ACL78658.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030992|gb|ACL78661.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030998|gb|ACL78664.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031000|gb|ACL78665.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031002|gb|ACL78666.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031004|gb|ACL78667.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031006|gb|ACL78668.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031008|gb|ACL78669.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031010|gb|ACL78670.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031012|gb|ACL78671.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030790|gb|ACL78560.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030672|gb|ACL78501.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030674|gb|ACL78502.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030686|gb|ACL78508.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030688|gb|ACL78509.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030690|gb|ACL78510.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030700|gb|ACL78515.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030702|gb|ACL78516.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030710|gb|ACL78520.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030714|gb|ACL78522.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030716|gb|ACL78523.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030718|gb|ACL78524.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030720|gb|ACL78525.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030732|gb|ACL78531.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030746|gb|ACL78538.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030756|gb|ACL78543.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030768|gb|ACL78549.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030770|gb|ACL78550.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030800|gb|ACL78565.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030812|gb|ACL78571.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030814|gb|ACL78572.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030816|gb|ACL78573.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030818|gb|ACL78574.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030826|gb|ACL78578.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030844|gb|ACL78587.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030852|gb|ACL78591.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220031172|gb|ACL78751.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030936|gb|ACL78633.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220031034|gb|ACL78682.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031048|gb|ACL78689.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031054|gb|ACL78692.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030894|gb|ACL78612.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|65329125|gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220031174|gb|ACL78752.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|65329050|gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030874|gb|ACL78602.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030916|gb|ACL78623.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031014|gb|ACL78672.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220031042|gb|ACL78686.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030912|gb|ACL78621.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030914|gb|ACL78622.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030888|gb|ACL78609.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220031046|gb|ACL78688.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031084|gb|ACL78707.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031092|gb|ACL78711.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031116|gb|ACL78723.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031118|gb|ACL78724.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031120|gb|ACL78725.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031122|gb|ACL78726.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031124|gb|ACL78727.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031126|gb|ACL78728.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031128|gb|ACL78729.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031130|gb|ACL78730.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031132|gb|ACL78731.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031134|gb|ACL78732.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031152|gb|ACL78741.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031154|gb|ACL78742.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031196|gb|ACL78763.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031200|gb|ACL78765.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031202|gb|ACL78766.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030858|gb|ACL78594.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030692|gb|ACL78511.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030696|gb|ACL78513.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030698|gb|ACL78514.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030704|gb|ACL78517.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030708|gb|ACL78519.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030722|gb|ACL78526.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030724|gb|ACL78527.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030728|gb|ACL78529.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030730|gb|ACL78530.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030734|gb|ACL78532.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030736|gb|ACL78533.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030738|gb|ACL78534.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030740|gb|ACL78535.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030742|gb|ACL78536.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030744|gb|ACL78537.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030748|gb|ACL78539.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030750|gb|ACL78540.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030752|gb|ACL78541.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030754|gb|ACL78542.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030758|gb|ACL78544.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030760|gb|ACL78545.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030762|gb|ACL78546.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030764|gb|ACL78547.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030766|gb|ACL78548.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030772|gb|ACL78551.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030774|gb|ACL78552.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030776|gb|ACL78553.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030778|gb|ACL78554.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030782|gb|ACL78556.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030784|gb|ACL78557.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030786|gb|ACL78558.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030788|gb|ACL78559.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030792|gb|ACL78561.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030794|gb|ACL78562.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030796|gb|ACL78563.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030798|gb|ACL78564.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030802|gb|ACL78566.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030804|gb|ACL78567.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030806|gb|ACL78568.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030808|gb|ACL78569.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030810|gb|ACL78570.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030820|gb|ACL78575.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030822|gb|ACL78576.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030824|gb|ACL78577.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030828|gb|ACL78579.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030830|gb|ACL78580.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030832|gb|ACL78581.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030834|gb|ACL78582.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030838|gb|ACL78584.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030846|gb|ACL78588.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030850|gb|ACL78590.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030884|gb|ACL78607.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030908|gb|ACL78619.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030886|gb|ACL78608.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030892|gb|ACL78611.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030900|gb|ACL78615.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031030|gb|ACL78680.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031036|gb|ACL78683.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031052|gb|ACL78691.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031056|gb|ACL78693.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030882|gb|ACL78606.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030896|gb|ACL78613.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030920|gb|ACL78625.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031032|gb|ACL78681.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030910|gb|ACL78620.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031060|gb|ACL78695.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030970|gb|ACL78650.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030906|gb|ACL78618.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030928|gb|ACL78629.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030706|gb|ACL78518.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030902|gb|ACL78616.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030904|gb|ACL78617.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030922|gb|ACL78626.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030972|gb|ACL78651.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|65329070|gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|65329087|gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gi|65329107|gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030976|gb|ACL78653.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030978|gb|ACL78654.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030994|gb|ACL78662.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220031018|gb|ACL78674.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031026|gb|ACL78678.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031028|gb|ACL78679.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220031090|gb|ACL78710.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031114|gb|ACL78722.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031168|gb|ACL78749.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031170|gb|ACL78750.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031190|gb|ACL78760.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031192|gb|ACL78761.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031194|gb|ACL78762.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030880|gb|ACL78605.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220030676|gb|ACL78503.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030680|gb|ACL78505.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030694|gb|ACL78512.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030842|gb|ACL78586.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030848|gb|ACL78589.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|62868803|gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220031022|gb|ACL78676.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|220031016|gb|ACL78673.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031020|gb|ACL78675.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031024|gb|ACL78677.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+V ALLR Y+V V +G +AW L+ NIDL+L
Sbjct: 34 WEEFLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVL 93
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 94 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 153
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 154 ELKNLWAHVWRR 165
>gi|297810367|ref|XP_002873067.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
gi|297318904|gb|EFH49326.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
Length = 733
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 135/220 (61%), Gaps = 16/220 (7%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +RVLLVE DD TR IVTALLR SY V +G++AW+VL+ +ID++L
Sbjct: 76 WERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVL 135
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG +LL+ ++ H+ +NIPVIMMSS DS+ V+KC+ +GA D+LVKP+R+NE
Sbjct: 136 TEVIMPYLSGISLLSKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 195
Query: 143 LRNLWQHVWRR------QSSMVSGNETQDESVGQQKIEATSENDAASNHS-SGYMACIQS 195
L+ LWQHVWRR S ++TQ +SV + I + + +S + +G + S
Sbjct: 196 LKILWQHVWRRCQSSSGSGSESGTHQTQ-KSVKSKSIRKSDHDSRSSGENENGSIGLNAS 254
Query: 196 KGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGK 235
G GS QSS TK E V+D P + LW +
Sbjct: 255 DGS--SDGSGAQSSWTKKAVE-----VDDSP-RAVSLWDR 286
>gi|456359250|dbj|BAM93454.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359252|dbj|BAM93455.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359254|dbj|BAM93456.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359256|dbj|BAM93457.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359258|dbj|BAM93458.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
Length = 331
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+VTALLR Y+V +G +AW L+ NIDL+L
Sbjct: 27 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 86
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 87 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 146
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 147 ELKNLWAHVWRR 158
>gi|281308396|gb|ADA58346.1| pseudo-response regulator 7b [Brassica rapa]
Length = 704
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 98/131 (74%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +RVLLVE DD TR IVTALLR SY V V +G++AW+VL+ +ID++L
Sbjct: 65 WERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVL 124
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG LL ++ H+ +NIPVIMMSS DS+ V+KC+ +GA D+LVKP+R+NE
Sbjct: 125 TEVVMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 184
Query: 143 LRNLWQHVWRR 153
L+ LWQHVWRR
Sbjct: 185 LKILWQHVWRR 195
>gi|18414032|ref|NP_568107.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
gi|52783235|sp|Q93WK5.1|APRR7_ARATH RecName: Full=Two-component response regulator-like APRR7; AltName:
Full=Pseudo-response regulator 7
gi|10281004|dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thaliana]
gi|14532638|gb|AAK64047.1| unknown protein [Arabidopsis thaliana]
gi|23296600|gb|AAN13129.1| unknown protein [Arabidopsis thaliana]
gi|332003137|gb|AED90520.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
Length = 727
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 97/131 (74%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +RVLLVE DD TR IVTALLR SY V +G++AW+VL+ +ID++L
Sbjct: 69 WERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVL 128
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG LL ++ H+ +NIPVIMMSS DS+ V+KC+ +GA D+LVKP+R+NE
Sbjct: 129 TEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 188
Query: 143 LRNLWQHVWRR 153
L+ LWQHVWRR
Sbjct: 189 LKILWQHVWRR 199
>gi|168027173|ref|XP_001766105.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
gi|162682748|gb|EDQ69164.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
Length = 1056
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 99/131 (75%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE+FL + L+VLLVE DD+TR +V ALLR +Y VT V +G AW +L+ N DL+L
Sbjct: 297 WESFLLKRNLKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVL 356
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+V +P +SG LL+ +M+ E CK +P+++MSS DS+ V++C+ +GA DYLVKPVR+NE
Sbjct: 357 TDVVMPYLSGVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNE 416
Query: 143 LRNLWQHVWRR 153
L+NLWQHVWR+
Sbjct: 417 LKNLWQHVWRK 427
>gi|118638618|gb|ABL09465.1| pseudo-response regulator [Triticum aestivum]
gi|379025584|dbj|BAL63569.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025586|dbj|BAL63570.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025588|dbj|BAL63571.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025590|dbj|BAL63572.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025592|dbj|BAL63573.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025594|dbj|BAL63574.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025596|dbj|BAL63575.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025598|dbj|BAL63576.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025600|dbj|BAL63577.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025602|dbj|BAL63578.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025604|dbj|BAL63579.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025606|dbj|BAL63580.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025608|dbj|BAL63581.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025610|dbj|BAL63582.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025612|dbj|BAL63583.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025614|dbj|BAL63584.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025616|dbj|BAL63585.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025618|dbj|BAL63586.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025620|dbj|BAL63587.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025632|dbj|BAL63593.1| pseudo-response regulator [Triticum durum]
gi|379025634|dbj|BAL63594.1| pseudo-response regulator [Triticum durum]
gi|379025636|dbj|BAL63595.1| pseudo-response regulator [Triticum durum]
gi|379025640|dbj|BAL63597.1| pseudo-response regulator [Triticum durum]
gi|456359214|dbj|BAM93436.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359216|dbj|BAM93437.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 266
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+VTALLR Y+V +G +AW L+ NIDL+L
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
>gi|325910798|dbj|BAJ83829.1| circadian response regulator 2b [Physcomitrella patens subsp.
patens]
Length = 917
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 99/131 (75%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE+FL + L+VLLVE DD+TR +V ALLR +Y VT V +G AW +L+ N DL+L
Sbjct: 177 WESFLLKRNLKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVL 236
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+V +P +SG LL+ +M+ E CK +P+++MSS DS+ V++C+ +GA DYLVKPVR+NE
Sbjct: 237 TDVVMPYLSGVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNE 296
Query: 143 LRNLWQHVWRR 153
L+NLWQHVWR+
Sbjct: 297 LKNLWQHVWRK 307
>gi|242036083|ref|XP_002465436.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
gi|241919290|gb|EER92434.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
Length = 765
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 112/166 (67%), Gaps = 3/166 (1%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL LRV+LVE DDSTRQ+V+ALLRK Y V +G AW L+ NIDL+L
Sbjct: 71 WERFLPVKTLRVMLVENDDSTRQVVSALLRKCCYEVIPAENGSHAWRYLEDLQNNIDLVL 130
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG LL+ + H+ICK+IPVIMMSS DS+S V+KC+ +GA D+LVKP+R+NE
Sbjct: 131 TEVFMPCLSGIGLLSKITSHKICKDIPVIMMSSNDSMSMVFKCLSKGAVDFLVKPLRKNE 190
Query: 143 LRNLWQHVWRR---QSSMVSGNETQDESVGQQKIEATSENDAASNH 185
L+NLWQHVWRR S S + Q + + END+ SNH
Sbjct: 191 LKNLWQHVWRRCHSSSGSGSESGIQTQKCAKPNTGDEYENDSDSNH 236
>gi|379025904|dbj|BAL63729.1| pseudo-response regulator [Triticum turanicum]
gi|379025906|dbj|BAL63730.1| pseudo-response regulator [Triticum turanicum]
gi|379025908|dbj|BAL63731.1| pseudo-response regulator [Triticum polonicum]
Length = 665
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+VTALLR Y+ +G +AW L+ NIDL+L
Sbjct: 26 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQGLPAENGHQAWAYLQDMQSNIDLVL 85
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVI MSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 86 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVISMSSHDSMGTVLSCLSNGAADFLAKPIRKN 145
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 146 ELKNLWAHVWRR 157
>gi|302782157|ref|XP_002972852.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
gi|300159453|gb|EFJ26073.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
Length = 639
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 95/131 (72%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE L+VLLVE DDSTR +V ALLR Y+V +GL+AW +L R R IDL+L
Sbjct: 33 WENLPPYRQLKVLLVEDDDSTRHVVAALLRNCGYQVVPAANGLQAWSLLDDRNREIDLVL 92
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+V +P +SG LL+ +M H+ + +PV+MMSS DS + V+KC+ +GAAD+LVKPVR+NE
Sbjct: 93 TDVVMPGLSGLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFLVKPVRKNE 152
Query: 143 LRNLWQHVWRR 153
L+NLWQH WR+
Sbjct: 153 LKNLWQHAWRK 163
>gi|379025638|dbj|BAL63596.1| pseudo-response regulator [Triticum durum]
Length = 266
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+VTALLR Y+V +G +AW L+ NIDL+L
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAA++L KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKN 148
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
>gi|379025622|dbj|BAL63588.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025624|dbj|BAL63589.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359226|dbj|BAM93442.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 186
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+VTALLR Y+V +G +AW L+ NIDL+L
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
TEV + +SG LL +M HE+CK+IPVIMMSS DS+ TV C+ GAAD+L KP+R+N
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKN 148
Query: 142 ELRNLWQHVWRR 153
EL+NLW HVWRR
Sbjct: 149 ELKNLWAHVWRR 160
>gi|225439773|ref|XP_002275837.1| PREDICTED: two-component response regulator-like APRR7 [Vitis
vinifera]
gi|297741496|emb|CBI32628.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
Query: 2 GDVVLNDEELKEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAV 61
GD V +DEE M+ E + M RVLLVE DDSTR ++ ALLR Y+VT
Sbjct: 37 GDDVSDDEE--SMDCYEALV-------LMKSRVLLVENDDSTRYVIGALLRNCGYQVTET 87
Query: 62 PDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVST 121
+GL+AW +LK +IDL+LTEV+LP +SG ALL +M H+ KNIPVIMMS+ DS +
Sbjct: 88 SNGLQAWRILKDTSNHIDLVLTEVNLPRLSGIALLCKIMNHKTRKNIPVIMMSTHDSGAL 147
Query: 122 VYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ 154
V KC+ +GA D+LVKPVR+NEL+ LWQH+WRR+
Sbjct: 148 VLKCLSKGATDFLVKPVRKNELKFLWQHIWRRR 180
>gi|413925155|gb|AFW65087.1| hypothetical protein ZEAMMB73_389889 [Zea mays]
Length = 319
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 173/327 (52%), Gaps = 37/327 (11%)
Query: 65 LKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYK 124
+KAW V++ R DL+LTEV +PS+SG LL+ ++ + CKNIPV+MMSSQDS+ TV K
Sbjct: 1 MKAWGVMRERAYAFDLVLTEVAMPSLSGIQLLSRIVAADECKNIPVVMMSSQDSIGTVLK 60
Query: 125 CMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASN 184
CM +GA D+LVKPVR+NELRNLWQHVWRR + N SEN+AASN
Sbjct: 61 CMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNCQTN--------------GSENNAASN 106
Query: 185 HSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSR-QLWGKSLQNDVKM 243
H S +A GE ++ SD QS +K D E S VE + D+ R ++ G S N+++
Sbjct: 107 HISANVANGSKTGENSDEESDAQSFGSKRDTEIHS--VEAVQDIRRDEVAGSSKNNELQN 164
Query: 244 QNHEA---RVNYGQKSLVPVTEAQGSEVAACKEANTRAHFDED--------TELETHRSD 292
++++ +V+ + + + ++ + + C T A E T+ + R
Sbjct: 165 KSYDGVNTKVDVSKYTNGAPSGSEKNVRSKCLNGITSAKVAEQIMDNALRITDASSRRPT 224
Query: 293 VILTSEVCNVPVNSPR---QVIDFMSAFNNHKPPSNNGAS--RFDSSPQLDLSL---RRT 344
+ P + V++ + N+ + GA+ DS P + +
Sbjct: 225 NLGNGLAMTEPAADRKCQSSVMENNAVTENNPGDKSKGAAIGHADSCPSEFMVTNLGKEH 284
Query: 345 HPDGFENQVER-KFILRHSNASAFTRY 370
H +G++NQ R K I HSN+SAF+RY
Sbjct: 285 HLNGYKNQEFREKDIFNHSNSSAFSRY 311
>gi|325910796|dbj|BAJ83828.1| circadian response regulator 2a [Physcomitrella patens subsp.
patens]
Length = 915
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 201/412 (48%), Gaps = 76/412 (18%)
Query: 16 GNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRP 75
G +G WE+FL + LRVLLVE DD+TR +V ALLR +Y VT+V +G AW +L+
Sbjct: 167 GIQGGDSWESFLLKRKLRVLLVEDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEAN 226
Query: 76 RNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
N DL+LT+V +P +SG +L+ +++ E CK +P+++MSS DS++ V++C+ +GA DYLV
Sbjct: 227 SNFDLVLTDVVMPCLSGVGILSKMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLV 286
Query: 136 KPVRRNELRNLWQHVWRR-------QSSMVSGNETQDESVGQQKIEATSEN--------- 179
KPVR+NEL+NLWQHVWR+ S SGN+T + + Q + ++N
Sbjct: 287 KPVRKNELKNLWQHVWRKCHSGSSIGSRSGSGNQTGEVARPQSRGVEAADNPIGSNDGNG 346
Query: 180 --------------DAASNHSSGYMACIQ----SKGEFIEKGS--DEQSSCTKPDFEAES 219
S++ SG AC+Q + + + + DE+ T D AE
Sbjct: 347 SSDGSDNGSSRLNAQGGSDNGSGNQACVQPVQVPRNNAVPEAADGDEEGQATSQDKGAE- 405
Query: 220 AHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSLVPVTEAQGSEVAAC-------- 271
+ + +D++M + N K P Q E AAC
Sbjct: 406 -------------LDEEMGHDLEMATRPSACNTTGKDQQPEVARQLDEDAACVFQDAGQS 452
Query: 272 -----KEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFNNHKP---- 322
E+ + + ++ E + ++ ++ C Q + + F+ P
Sbjct: 453 PDGINGESPSSSLRNDAAEESSPKAIDLINVVACQPQTQDAEQPQESENDFDELDPQGSS 512
Query: 323 PSNNGASRFDSSPQLDLSLRRTHP----DGFENQVERKFILRHSNASAFTRY 370
P N S DS P L+LSL+R DG ++E + LR+S SAF+RY
Sbjct: 513 PKVNSGS--DSGPMLELSLKRPRSAVDNDG---ELEERQPLRYSGGSAFSRY 559
>gi|357472487|ref|XP_003606528.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355507583|gb|AES88725.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 830
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 101/168 (60%), Gaps = 34/168 (20%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ WE FL +++VLLV+ DDSTR +V ALLR Y V AV +GL+AW+VL+ +ID
Sbjct: 77 VTYWEKFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVNAVSNGLQAWKVLEDPGNHID 136
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVI---------------------------- 111
L+LTE+ +P ++G LL +M H+ KNIPVI
Sbjct: 137 LVLTEIAMPFVTGIGLLCKIMSHKTLKNIPVISKCHSKPKLCTIFLCILIIAHLVFWCTE 196
Query: 112 ------MMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+MS DS+ V+KC+ +GAAD+LVKP+RRNEL+NLWQHVWRR
Sbjct: 197 HIEMYAVMSCHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHVWRR 244
>gi|425856112|gb|AFX97564.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 107/152 (70%), Gaps = 17/152 (11%)
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
IDL+LTEV+LPS+SGF LL+ +MEH+ CKNIPVIMMSS D+VS V+KCM++GAAD+LVKP
Sbjct: 1 IDLVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKP 60
Query: 138 VRRNELRNLWQHVWRRQSSMVSG-----NETQDESVGQQ---KIEATSENDAASNHSSGY 189
+R+NELRNLWQHVWR+Q + +G Q+E+V +Q K EAT + N
Sbjct: 61 IRKNELRNLWQHVWRKQ--LANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQN----- 113
Query: 190 MACIQSKGEFIEKGSDEQSSCTKPDFEAESAH 221
++ E E+ SD QSSCT+ + EAES H
Sbjct: 114 --VVRKNRECSEQESDAQSSCTRSEPEAESKH 143
>gi|356514272|ref|XP_003525830.1| PREDICTED: uncharacterized protein LOC100778877 [Glycine max]
Length = 424
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 106/148 (71%), Gaps = 9/148 (6%)
Query: 60 AVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSV 119
AVPDGLKAWE+LK + +DLILTEV+LP+ISGFAL +L+MEH+ICK I VIMMSS DSV
Sbjct: 20 AVPDGLKAWEMLKKKAPELDLILTEVELPAISGFALFSLIMEHDICKRILVIMMSSHDSV 79
Query: 120 STVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSEN 179
+ KCM+ GA ++L+KP+R+NELRNLWQH+ TQ+ + +K++ SE+
Sbjct: 80 NMALKCMLNGAINFLIKPIRKNELRNLWQHI---------STPTQNTTFSPKKLKTASED 130
Query: 180 DAASNHSSGYMACIQSKGEFIEKGSDEQ 207
++ASN S+G MA + E E+ S+ Q
Sbjct: 131 NSASNKSNGSMASSKKNNECSERLSEAQ 158
>gi|425856110|gb|AFX97563.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 107/152 (70%), Gaps = 17/152 (11%)
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
IDL+LTEV+LPS+SGF LL+ +MEH+ CKNIPVIMMSS D+VS V+KCM++GAAD+LVKP
Sbjct: 1 IDLVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKP 60
Query: 138 VRRNELRNLWQHVWRRQSSMVSG-----NETQDESVGQQ---KIEATSENDAASNHSSGY 189
+R+NELRNLWQHVWR+Q + +G Q+E+V +Q K EAT + N
Sbjct: 61 IRKNELRNLWQHVWRKQ--LANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQN----- 113
Query: 190 MACIQSKGEFIEKGSDEQSSCTKPDFEAESAH 221
++ E E+ SD QSSCT+ + EAES H
Sbjct: 114 --VVRKNRECSEQESDAQSSCTRSEPEAESKH 143
>gi|7413556|emb|CAB86035.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 129/213 (60%), Gaps = 9/213 (4%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL +RVLLVE DD TR IVTALLR SY V +G++AW+VL+ +ID++L
Sbjct: 69 WERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVL 128
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
TEV +P +SG LL ++ H+ +NIPVIMMSS DS+ V+KC+ +GA D+LVKP+R+NE
Sbjct: 129 TEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 188
Query: 143 LRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEK 202
L+ LWQH S + ++TQ + ++ ++ ++ + +G + S G
Sbjct: 189 LKILWQHSSGSGSESGT-HQTQKSVKSKSIKKSDQDSGSSDENENGSIGLNASDGS--SD 245
Query: 203 GSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGK 235
GS QSS TK ++ V+D P + LW +
Sbjct: 246 GSGAQSSWTK-----KAVDVDDSP-RAVSLWDR 272
>gi|414591290|tpg|DAA41861.1| TPA: hypothetical protein ZEAMMB73_323779 [Zea mays]
Length = 657
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 151/519 (29%), Positives = 228/519 (43%), Gaps = 82/519 (15%)
Query: 58 VTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQD 117
V + +G +AW L+ + NIDL+LTEV +P +SG +LL+ +M H I KNIPVIMMSS D
Sbjct: 37 VISAKNGQQAWAYLEDKGNNIDLVLTEVFMPGVSGISLLSRIMRHNIFKNIPVIMMSSSD 96
Query: 118 SVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ----SSMVSGNETQDESVGQQKI 173
+STV+KC+ +GA D+LVKP+R+NEL+NLWQHVWR++ S S + Q + + K
Sbjct: 97 DMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRQRCHSSSGSGSESGIQTQKCAKSKG 156
Query: 174 EATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLS---- 229
S N++ SN M G+ Q+S TK E +S + L+
Sbjct: 157 VNESGNNSGSNDDEAGMGLNARDDSDNGSGTQAQNSWTKLAVEIDSPQATSLDQLADPPN 216
Query: 230 ----------------RQLWGKSLQNDVKMQNHEARVNYGQKSLVPVTEAQGSE------ 267
R L KS +N K +N ++ K L E G E
Sbjct: 217 STCAQVIHSKSEICSNRWLPDKSNRNCKKPKN--TNDDFKGKDL----EIGGPENLYMGH 270
Query: 268 ---------VAACKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVIDFMSAFN 318
AA E N++ E+ E T R+ ++ S N+ + + F+
Sbjct: 271 QSSPNGRSIKAADHENNSKESMMENLEEPTVRAADLIGSMAKNMDTPQAARAAEDTPNFS 330
Query: 319 NHKPPSNNGASRFDSS--PQLDLSLRRTHP--DGFENQ------VERKFILRHSNASAFT 368
+ P ++ D P L+LSL+R+ DG N+ +R +LR SN SAFT
Sbjct: 331 SKVPEGKGKNNQNDKYVLPSLELSLKRSRSCGDGANNKNTVKDDEQRNCVLRRSNLSAFT 390
Query: 369 RY-TNKPSEPQHSSLSGVC----NQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVN 423
RY T+ S + L G C N + +TDS N S + AA + + +
Sbjct: 391 RYHTSAASNQGGTGLVGSCSPHDNSSEAVKTDSTYNMK-------SNSDAAPIKQGSNGS 443
Query: 424 SLATGHSKQSELAVSYPQQRPCPVPVSVKVNSTNQAMHKLDHKLDSLEDLGHISPATDQS 483
S ++ V+ P +P ++K N A H + + + A + +
Sbjct: 444 SNDNDMGSTTKDVVTKPM-----LPSAIKANGYTSAFHPVQQWMVPANATAGKTKADENT 498
Query: 484 ASS---SFCNGAVSRLNSMGYGSACGSNSNLDQVTAGRA 519
A + F NG L CGS++ D G+A
Sbjct: 499 ARNHCVHFENGGSGALQ-------CGSSNVFDPPLEGQA 530
>gi|168027167|ref|XP_001766102.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
gi|162682745|gb|EDQ69161.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
Length = 1143
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 104/138 (75%)
Query: 16 GNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRP 75
G +G WE+FL + LRVLLVE DD+TR +V ALLR +Y VT+V +G AW +L+
Sbjct: 167 GIQGGDSWESFLLKRKLRVLLVEDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEAN 226
Query: 76 RNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
N DL+LT+V +P +SG +L+ +++ E CK +P+++MSS DS++ V++C+ +GA DYLV
Sbjct: 227 SNFDLVLTDVVMPCLSGVGILSKMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLV 286
Query: 136 KPVRRNELRNLWQHVWRR 153
KPVR+NEL+NLWQHVWR+
Sbjct: 287 KPVRKNELKNLWQHVWRK 304
>gi|379025628|dbj|BAL63591.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025630|dbj|BAL63592.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 697
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 94/161 (58%), Gaps = 30/161 (18%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+VTALLR Y+V +G +AW L+ NIDL+L
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIP-----------------------------VIM 112
TEV + +SG LL +M HE+CK+IP +
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPDPPHLGAKMFQYQVHLLQCCCVHRFICSWFPV 148
Query: 113 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
MSS DS+ TV C+ GAAD+L KP+R+NEL+NLW HVWRR
Sbjct: 149 MSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWRR 189
>gi|255568149|ref|XP_002525050.1| Two-component response regulator ARR2, putative [Ricinus communis]
gi|223535631|gb|EEF37297.1| Two-component response regulator ARR2, putative [Ricinus communis]
Length = 659
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 170/359 (47%), Gaps = 49/359 (13%)
Query: 58 VTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQD 117
VTAV +GL+AW++L+ +IDLIL+EV +P +SG LL +M H CKNIPVIMMSS D
Sbjct: 3 VTAVANGLQAWKLLEDLTNHIDLILSEVAMPCLSGIGLLCKIMNHRTCKNIPVIMMSSHD 62
Query: 118 SVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATS 177
S++ V+KC+ +GA D+LVKP+R+NEL+NLWQHVWR+ S D + S
Sbjct: 63 SMNVVFKCLSKGALDFLVKPIRKNELKNLWQHVWRKCHSSSGSGSESDIRTRKSTSPEES 122
Query: 178 ENDAASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESA-------HVEDMPD--- 227
+N+ SN + + + + GS QSS TK E +S V D PD
Sbjct: 123 DNNTGSNDEDDIGSTGLNARDGSDHGSGTQSSWTKRAIEVDSPKLMSPWNQVADPPDSTC 182
Query: 228 ----------LSRQLWGKSLQNDVKMQNHE-ARVNYGQKSLVPVTEAQGSEVAACKEANT 276
LS + + + + Q+ + V G+ + V S+V E
Sbjct: 183 ARVIHLIPEALSNKWVPVTTTKECEGQDDDLGNVVSGKDLEIGVPRIPNSQVEHPSEKVA 242
Query: 277 RAHFDEDTEL-----------ETHRSDVILTSEVCNVPVNSPR-QVIDFMSAFNNHKPPS 324
D + E + ++++ L SE P R Q +DFM N PS
Sbjct: 243 ANIADSNGEKLPETISKKDGEQKEKTNLELKSE---EPDGESRNQPVDFMGITTNSADPS 299
Query: 325 ------------NNGASRFDSSPQLDLSLRRTHPDG-FENQVERKFILRHSNASAFTRY 370
+ A P L+LSL+R G + + + +LRHS+ SAF+RY
Sbjct: 300 VVFDVPKASNQNDEVAHESKGIPCLELSLKRLRDVGDTGTRAKDRNVLRHSDLSAFSRY 358
>gi|379025626|dbj|BAL63590.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 697
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 94/161 (58%), Gaps = 30/161 (18%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
WE FL R +RVLLVE DDSTRQ+VTALLR Y+V +G +AW L+ NIDL+L
Sbjct: 29 WEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVL 88
Query: 83 TEVDL-PSISGFALLTLVMEHEICKNIP-----------------------------VIM 112
TEV + +SG LL +M HE+CK+IP +
Sbjct: 89 TEVFMHGGLSGIDLLGRIMNHEVCKDIPDPPHLGAKMFQYQVHLLQCCCVHRFICSWFPV 148
Query: 113 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
MSS DS+ TV C+ GAAD+L KP+R+NEL+NLW HVWRR
Sbjct: 149 MSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWRR 189
>gi|115484281|ref|NP_001065802.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|108864015|gb|ABG22372.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|108864016|gb|ABG22373.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|113644506|dbj|BAF27647.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|125576282|gb|EAZ17504.1| hypothetical protein OsJ_33036 [Oryza sativa Japonica Group]
gi|213959178|gb|ACJ54923.1| CCT motif family protein [Oryza sativa Japonica Group]
gi|218185285|gb|EEC67712.1| hypothetical protein OsI_35190 [Oryza sativa Indica Group]
Length = 623
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 208/438 (47%), Gaps = 66/438 (15%)
Query: 65 LKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYK 124
+KAW V++ R DL+LTEV +P++SG LL+ ++ + CKNIPVIMMSSQDS+ TV +
Sbjct: 1 MKAWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLR 60
Query: 125 CMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESV----------GQQKIE 174
CM +GA D+LVKPVR+NELRNLWQHVWRR + N +++ + G + E
Sbjct: 61 CMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNSQTNASENNAASNHLSANGGNGSKTGE 120
Query: 175 ATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWG 234
+ E A + S IQS + E +D + ++ + + ++ ++ M S L G
Sbjct: 121 HSDEESDAQSSGSKREVEIQSAEKLPEVVADGGAGSSR-EHKIQNGFIDGMNTKSHALKG 179
Query: 235 K------SLQNDVKMQNHEARVNYGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELET 288
+ D ++Q N K L +T A+ A + + F + + L +
Sbjct: 180 NDDAPSGNACGDSELQVLSTEKNVRSKFLNGITSAK----VAGQIMDNALRFADSSSLRS 235
Query: 289 HR--SDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNN--------GASRFDSSPQ-- 336
D+++ ++ + R+ SA N+ NN +S P
Sbjct: 236 SDPGKDLLVVAQT-----TADRKCKS--SALENNAVMENNLSENSKGTATGHAESCPSHF 288
Query: 337 LDLSLRRTHP-DGFEN-QVERKFILRHSNASAFTRYTNKPSE-----PQHSSLSGVCNQQ 389
++++L + H +G+ N ++ K I HSN+SAF+RY NK E P S V +QQ
Sbjct: 289 VEINLEKQHHLNGYTNHKLNEKDIFNHSNSSAFSRYGNKRIESSAQRPFPPSFR-VVHQQ 347
Query: 390 KEFETDSEKNFSNILTACNSYTPAATLSTQ----RSVNSLA------------TGHSKQS 433
++ + + S +L +C T +T+ Q RS A T S
Sbjct: 348 PVYDKNPQS--SRVLLSCEHNTRESTVQAQVPLDRSTEGAAILCSSSVREDAGTSSSSPR 405
Query: 434 ELAVSYPQQRPCPVPVSV 451
+ ++++P PVP+ V
Sbjct: 406 KDSLTHPSYGFIPVPIPV 423
>gi|108864017|gb|ABG22374.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 620
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 207/435 (47%), Gaps = 63/435 (14%)
Query: 65 LKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYK 124
+KAW V++ R DL+LTEV +P++SG LL+ ++ + CKNIPVIMMSSQDS+ TV +
Sbjct: 1 MKAWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLR 60
Query: 125 CMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESV----------GQQKIE 174
CM +GA D+LVKPVR+NELRNLWQHVWRR + N +++ + G + E
Sbjct: 61 CMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNSQTNASENNAASNHLSANGGNGSKTGE 120
Query: 175 ATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWG 234
+ E A + S IQS + E +D + ++ + + ++ ++ M S L
Sbjct: 121 HSDEESDAQSSGSKREVEIQSAEKLPEVVADGGAGSSR-EHKIQNGFIDGMNTKSHALKD 179
Query: 235 KSLQN---DVKMQNHEARVNYGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHR- 290
N D ++Q N K L +T A+ A + + F + + L +
Sbjct: 180 APSGNACGDSELQVLSTEKNVRSKFLNGITSAK----VAGQIMDNALRFADSSSLRSSDP 235
Query: 291 -SDVILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNN--------GASRFDSSPQ--LDL 339
D+++ ++ + R+ SA N+ NN +S P +++
Sbjct: 236 GKDLLVVAQT-----TADRKCKS--SALENNAVMENNLSENSKGTATGHAESCPSHFVEI 288
Query: 340 SLRRTHP-DGFEN-QVERKFILRHSNASAFTRYTNKPSE-----PQHSSLSGVCNQQKEF 392
+L + H +G+ N ++ K I HSN+SAF+RY NK E P S V +QQ +
Sbjct: 289 NLEKQHHLNGYTNHKLNEKDIFNHSNSSAFSRYGNKRIESSAQRPFPPSFR-VVHQQPVY 347
Query: 393 ETDSEKNFSNILTACNSYTPAATLSTQ----RSVNSLA------------TGHSKQSELA 436
+ + + S +L +C T +T+ Q RS A T S + +
Sbjct: 348 DKNPQS--SRVLLSCEHNTRESTVQAQVPLDRSTEGAAILCSSSVREDAGTSSSSPRKDS 405
Query: 437 VSYPQQRPCPVPVSV 451
+++P PVP+ V
Sbjct: 406 LTHPSYGFIPVPIPV 420
>gi|410718344|gb|AFV79548.1| pseudo response regulator 1 [Pinus pinaster]
Length = 565
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+ L R +R+LL + D + Q + LLRK SY+VTAV + VL R IDLIL E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
VDLP GF +L + + IP++MMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 145 NLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 134 NLWMHMWRRR 143
>gi|410716788|gb|AFV78770.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716832|gb|AFV78792.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+ L R +R+LL + D + Q + LLRK SY+VTAV + VL R IDLIL E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQKLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
VDLP GF +L + + IP++MMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 145 NLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 134 NLWMHMWRRR 143
>gi|410716910|gb|AFV78831.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+ L R +R+LL + D + Q + LLRK SY+VTAV + VL R IDLIL E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
VDLP GF +L + + IP++MMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 145 NLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 134 NLWMHMWRRR 143
>gi|410716834|gb|AFV78793.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716890|gb|AFV78821.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+ L R +R+LL + D + Q + LLRK SY+VTAV + VL R IDLIL E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
VDLP GF +L + + IP++MMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 145 NLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 134 NLWMHMWRRR 143
>gi|410716730|gb|AFV78741.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+ L R +R+LL + D + Q + LLRK SY+VTAV + VL R IDLIL E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
VDLP GF +L + + IP++MMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 145 NLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 134 NLWMHMWRRR 143
>gi|410716774|gb|AFV78763.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716780|gb|AFV78766.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716802|gb|AFV78777.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716814|gb|AFV78783.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716864|gb|AFV78808.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716874|gb|AFV78813.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716918|gb|AFV78835.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+ L R +R+LL + D + Q + LLRK SY+VTAV + VL R IDLIL E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
VDLP GF +L + + IP++MMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 145 NLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 134 NLWMHMWRRR 143
>gi|410716750|gb|AFV78751.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716798|gb|AFV78775.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716942|gb|AFV78847.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716946|gb|AFV78849.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716952|gb|AFV78852.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716956|gb|AFV78854.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716958|gb|AFV78855.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+ L R +R+LL + D + Q + LLRK SY+VTAV + VL R IDLIL E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
VDLP GF +L + + IP++MMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 145 NLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 134 NLWMHMWRRR 143
>gi|410716738|gb|AFV78745.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716742|gb|AFV78747.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716744|gb|AFV78748.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716752|gb|AFV78752.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716756|gb|AFV78754.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716768|gb|AFV78760.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716772|gb|AFV78762.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716776|gb|AFV78764.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716784|gb|AFV78768.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716808|gb|AFV78780.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716810|gb|AFV78781.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716828|gb|AFV78790.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+ L R +R+LL + D + Q + LLRK SY+VTAV + VL R IDLIL E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
VDLP GF +L + + IP++MMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 145 NLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 134 NLWMHMWRRR 143
>gi|410716876|gb|AFV78814.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716898|gb|AFV78825.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+ L R +R+LL + D + Q + LLRK SY+VTAV + VL R IDLIL E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
VDLP GF +L + + IP++MMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 145 NLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 134 NLWMHMWRRR 143
>gi|410716824|gb|AFV78788.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+ L R +R+LL + D + Q + LLRK SY+VTAV + VL R IDLIL E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
VDLP GF +L + + IP++MMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 145 NLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 134 NLWMHMWRRR 143
>gi|410716728|gb|AFV78740.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716732|gb|AFV78742.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716734|gb|AFV78743.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716736|gb|AFV78744.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716740|gb|AFV78746.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716746|gb|AFV78749.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716748|gb|AFV78750.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716754|gb|AFV78753.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716758|gb|AFV78755.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716760|gb|AFV78756.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716762|gb|AFV78757.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716764|gb|AFV78758.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716766|gb|AFV78759.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716770|gb|AFV78761.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716782|gb|AFV78767.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716786|gb|AFV78769.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716790|gb|AFV78771.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716792|gb|AFV78772.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716794|gb|AFV78773.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716796|gb|AFV78774.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716800|gb|AFV78776.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716804|gb|AFV78778.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716806|gb|AFV78779.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716812|gb|AFV78782.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716816|gb|AFV78784.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716818|gb|AFV78785.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716820|gb|AFV78786.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716822|gb|AFV78787.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716826|gb|AFV78789.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716830|gb|AFV78791.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716836|gb|AFV78794.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716838|gb|AFV78795.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716840|gb|AFV78796.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716842|gb|AFV78797.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716844|gb|AFV78798.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716846|gb|AFV78799.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716848|gb|AFV78800.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716850|gb|AFV78801.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716852|gb|AFV78802.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716854|gb|AFV78803.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716856|gb|AFV78804.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716858|gb|AFV78805.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716860|gb|AFV78806.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716866|gb|AFV78809.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716868|gb|AFV78810.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716870|gb|AFV78811.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716872|gb|AFV78812.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716878|gb|AFV78815.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716880|gb|AFV78816.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716882|gb|AFV78817.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716884|gb|AFV78818.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716886|gb|AFV78819.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716888|gb|AFV78820.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716892|gb|AFV78822.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716894|gb|AFV78823.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716896|gb|AFV78824.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716900|gb|AFV78826.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716902|gb|AFV78827.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716906|gb|AFV78829.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716912|gb|AFV78832.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716914|gb|AFV78833.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716916|gb|AFV78834.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716920|gb|AFV78836.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716922|gb|AFV78837.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716924|gb|AFV78838.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716926|gb|AFV78839.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716928|gb|AFV78840.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716930|gb|AFV78841.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716932|gb|AFV78842.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716934|gb|AFV78843.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716936|gb|AFV78844.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716938|gb|AFV78845.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716940|gb|AFV78846.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716944|gb|AFV78848.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716948|gb|AFV78850.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716950|gb|AFV78851.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716954|gb|AFV78853.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+ L R +R+LL + D + Q + LLRK SY+VTAV + VL R IDLIL E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
VDLP GF +L + + IP++MMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 145 NLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 134 NLWMHMWRRR 143
>gi|410716904|gb|AFV78828.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+ L R +R+LL + D + Q + LLRK SY+VTAV + VL R IDLIL E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
VDLP GF +L + + IP++MMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 145 NLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 134 NLWMHMWRRR 143
>gi|410716778|gb|AFV78765.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716862|gb|AFV78807.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+ L R +R+LL + D + Q + LLRK SY+VTAV + VL R IDLIL E
Sbjct: 14 SVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
VDLP GF +L + + IP++MMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 145 NLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 134 NLWMHMWRRR 143
>gi|410716908|gb|AFV78830.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+ L R +R+LL + D + Q + LLRK SY+VTAV + VL R IDLIL E
Sbjct: 14 SVLDRSFVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAE 73
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
VDLP GF +L + + IP++MMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 74 VDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELL 133
Query: 145 NLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 134 NLWMHMWRRR 143
>gi|356508533|ref|XP_003523010.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 560
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 89/139 (64%)
Query: 16 GNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRP 75
GN G + + F+ R +R+LL + D + Q V LL + SY+VT+V + + L
Sbjct: 14 GNNGKSGGDGFVDRSKVRILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAEG 73
Query: 76 RNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++ID+IL E+DLP G +L + + + + IPVIMMS+QD VS V KC+ GAADYLV
Sbjct: 74 QHIDIILAELDLPMKKGMKMLKYIAQDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLV 133
Query: 136 KPVRRNELRNLWQHVWRRQ 154
KP+R NEL NLW H+WRR+
Sbjct: 134 KPLRTNELLNLWTHMWRRR 152
>gi|375126877|gb|AFA35965.1| timing of cab expression 1/pseudo-response regulator 1 [Nicotiana
attenuata]
Length = 551
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 88/141 (62%)
Query: 14 MNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKG 73
M +E + E F+ R +R+LL + D + Q V LL K SY+VT+ + + L
Sbjct: 1 MEKSEIVKSGEGFIDRSKVRILLCDKDAKSSQEVFTLLCKCSYQVTSARSPRQVIDALNA 60
Query: 74 RPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADY 133
ID+IL+EVDLP G+ +L +M + + IPVIMMS+QD VS V KC+ GAADY
Sbjct: 61 EGPEIDIILSEVDLPMSKGYKMLKYIMRDKELRRIPVIMMSAQDEVSIVVKCLKFGAADY 120
Query: 134 LVKPVRRNELRNLWQHVWRRQ 154
LVKP+R NEL NLW H+WRR+
Sbjct: 121 LVKPLRTNELLNLWTHMWRRR 141
>gi|34499879|gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum crystallinum]
Length = 544
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 9/163 (5%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
+ F+ R +R+LL + D + + V LL SY+VTAV + + L +ID+IL+
Sbjct: 21 DPFIDRSKVRILLCDNDSKSCEEVFGLLSNCSYQVTAVRSARQVIDALNAEGPDIDIILS 80
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
EVDLP+ G +L +M + IPVIMMS+QD VS V KC+ GAADYLVKP+R NE+
Sbjct: 81 EVDLPTKKGLKMLKYIMRDRDLQRIPVIMMSTQDEVSLVVKCLRLGAADYLVKPLRTNEM 140
Query: 144 RNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHS 186
NLW H+WRR+ + + ++ I + AAS+HS
Sbjct: 141 LNLWTHMWRRRQML---------GLAEKNIVNYDFDLAASDHS 174
>gi|224124202|ref|XP_002330130.1| pseudo response regulator [Populus trichocarpa]
gi|222871264|gb|EEF08395.1| pseudo response regulator [Populus trichocarpa]
Length = 541
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 83/129 (64%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
F+ R +R+LL + D + Q V LL K SY+VT+V + + L ID+IL+EV
Sbjct: 19 FVDRSKVRILLCDNDAKSSQEVFTLLLKCSYQVTSVRSARQVIDALNAEGPEIDIILSEV 78
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
D+P G +L +M + + IPVIMMS+QD VS V KC+ GAADYLVKP+R NEL N
Sbjct: 79 DIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLN 138
Query: 146 LWQHVWRRQ 154
LW H+WRR+
Sbjct: 139 LWTHMWRRR 147
>gi|351722597|ref|NP_001235202.1| timing of CAB expression 1 [Glycine max]
gi|158999372|gb|ABW87010.1| timing of CAB expression 1 [Glycine max]
Length = 558
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 86/136 (63%)
Query: 19 GIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI 78
G + + F+ R +R+LL + D + Q V LL + SY+VT+V + + L ++I
Sbjct: 15 GKSGGDGFIDRSKVRILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAEGQHI 74
Query: 79 DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
D+IL E+DLP G +L + + + IPVIMMS+QD VS V KC+ GAADYLVKP+
Sbjct: 75 DIILAELDLPMKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPL 134
Query: 139 RRNELRNLWQHVWRRQ 154
R NEL NLW H+WRR+
Sbjct: 135 RTNELLNLWTHMWRRR 150
>gi|327342126|gb|AEA50850.1| aprr5 [Populus tremula]
Length = 412
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 120/207 (57%), Gaps = 8/207 (3%)
Query: 250 VNYGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCN---VPVNS 306
VN GQK LV +EA+GS A C++++ + D++ + R + E C+ NS
Sbjct: 2 VNLGQKLLVRDSEAEGSATAVCEDSD-KITVDKEITPGSGRMTANIAIEGCDKIGALANS 60
Query: 307 PRQVIDFMSAFNNHKPPSNNGASRFDSSPQLDLSLRRTHPDGFENQV-ERKFILRHSNAS 365
PR+ IDFM A NH NN F SSP LDLSLRR+HP GFE QV E + L+HSNAS
Sbjct: 61 PREAIDFMGASTNHSS-FNNVEIHFGSSPHLDLSLRRSHPSGFETQVTEERHTLQHSNAS 119
Query: 366 AFTRYTNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSL 425
AF YTN+ S+ HS+L+ NQ+ EF + + N S+ + NS + ST+RS SL
Sbjct: 120 AFM-YTNRASQLPHSALANTGNQE-EFRANYDGNISSNVNGYNSDALSLAPSTRRSAISL 177
Query: 426 ATGHSKQSELAVSYPQQRPCPVPVSVK 452
A G +K+ E+ S ++ P+ + VK
Sbjct: 178 AAGQTKEYEIVTSSSGEKVFPIHIPVK 204
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 49/66 (74%)
Query: 454 NSTNQAMHKLDHKLDSLEDLGHISPATDQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQ 513
+S N ++ K ++KLDSLE HIS ATDQSASSSFCNGA S NS+GYGSA GS SN DQ
Sbjct: 272 DSINGSLQKQENKLDSLEGREHISSATDQSASSSFCNGAASHFNSIGYGSASGSYSNADQ 331
Query: 514 VTAGRA 519
+ RA
Sbjct: 332 IANVRA 337
>gi|422898326|dbj|BAM67029.1| timing of cab expression 1-like [Chrysanthemum seticuspe f.
boreale]
Length = 562
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 84/131 (64%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
E F+ R +R+LL + D + V LL K SY+VT V + + L +ID+IL+
Sbjct: 12 EGFIDRSKVRILLCDNDMKSSVEVYDLLSKCSYQVTPVRSPRQVIDALNVEGPDIDIILS 71
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
EVDLP GF +L +M + + IPVIMMS+QD V+ V KC+ GAADYLVKP+R NEL
Sbjct: 72 EVDLPMAKGFKMLKYIMRDKDLRRIPVIMMSAQDEVAVVVKCLRLGAADYLVKPLRTNEL 131
Query: 144 RNLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 132 LNLWTHMWRRR 142
>gi|356513521|ref|XP_003525462.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 559
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 92/153 (60%), Gaps = 8/153 (5%)
Query: 9 EELKEMN------GNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVP 62
EEL +N G + F+ R +R+LL + D + + V ALL SY+VT+V
Sbjct: 8 EELINLNDKSSNFGGNNSKSGDGFIDRSKVRILLCDNDSKSSEEVFALLLGCSYQVTSVR 67
Query: 63 DGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVM-EHEICKNIPVIMMSSQDSVST 121
+ + L + ID+IL EVDLP G LL + + E+C+ IPVIMMS+QD VS
Sbjct: 68 SARQVIDALNAEGQYIDIILAEVDLPIKKGMKLLKYIARDKELCR-IPVIMMSAQDEVSI 126
Query: 122 VYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ 154
V KC+ GAADYLVKP+R NEL NLW H+WRR+
Sbjct: 127 VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 159
>gi|255547335|ref|XP_002514725.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223546329|gb|EEF47831.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 550
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 116/216 (53%), Gaps = 15/216 (6%)
Query: 10 ELKEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWE 69
E KE N + G E + R +R+LL + D + + V LL K SY+VT+V + +
Sbjct: 2 EGKEPNKSGGGG--EGLIDRSKVRILLCDNDSKSSEEVFTLLLKCSYQVTSVRSARQVID 59
Query: 70 VLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRG 129
L +ID+IL+EVDLP G +L + + + IPVIMMS+QD VS V KC+ G
Sbjct: 60 ALNAEGPDIDIILSEVDLPMNKGMKMLKYITRDKELRRIPVIMMSAQDEVSIVVKCLRLG 119
Query: 130 AADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGY 189
AADYLVKP+R NEL NLW H+WRR+ + G ++ + + A+ +DA +N ++
Sbjct: 120 AADYLVKPLRTNELLNLWTHMWRRRRML--GLAEKNILIYDFDLVASDPSDANTNSTT-- 175
Query: 190 MACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDM 225
F + D+ C P+ S H ED+
Sbjct: 176 --------LFSDDTDDKSRKCLNPEI-GVSTHQEDV 202
>gi|51980216|gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]
Length = 545
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 83/131 (63%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
+ F+ R +R+L+ + D + + V+ LL K SY+VT+V + + L NID+IL
Sbjct: 24 DAFIDRSKVRILVCDNDAKSLEEVSTLLLKCSYQVTSVRSARQVIDALNAEGANIDIILA 83
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
E+DLP G LL + + IPVIMMS+QD VS V KC+ GAADYLVKP+R NEL
Sbjct: 84 ELDLPLAKGMKLLKYINRDNDLRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 143
Query: 144 RNLWQHVWRRQ 154
NLW HVWRR+
Sbjct: 144 LNLWTHVWRRR 154
>gi|449486993|ref|XP_004157464.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR1-like [Cucumis sativus]
Length = 557
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 119/230 (51%), Gaps = 22/230 (9%)
Query: 10 ELKEMNGNE--------GIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAV 61
+ KE+N NE G + F+ R +R+LL + D + + V LL K SY+V +V
Sbjct: 2 DCKELNLNEDCGGCGSGGKNXGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVISV 61
Query: 62 PDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVST 121
+ + L ID+IL+EVDLP G +L + + + IPVIMMS+QD V
Sbjct: 62 SSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVPI 121
Query: 122 VYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDA 181
V KC+ GAADYLVKP+R NEL NLW H+WRR+ ++ G ++ + + A+ +DA
Sbjct: 122 VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRTL--GLAEKNILNYEFDLVASDPSDA 179
Query: 182 ASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPD--FEAESAHVEDMPDLS 229
+N S F + D+ T P+ A + H ED P ++
Sbjct: 180 NTN----------STTLFSDDTDDKSRRSTNPEMGITAPATHQEDEPGIA 219
>gi|449439291|ref|XP_004137419.1| PREDICTED: two-component response regulator-like APRR1-like
[Cucumis sativus]
Length = 557
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 110/206 (53%), Gaps = 14/206 (6%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
F+ R +R+LL + D + + V LL K SY+V +V + + L ID+IL+EV
Sbjct: 26 FIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEGPEIDIILSEV 85
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
DLP G +L + + + IPVIMMS+QD V V KC+ GAADYLVKP+R NEL N
Sbjct: 86 DLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLVKPLRTNELLN 145
Query: 146 LWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSD 205
LW H+WRR+ ++ G ++ + + A+ +DA +N S F + D
Sbjct: 146 LWTHMWRRRRTL--GLAEKNILNYEFDLVASDPSDANTN----------STTLFSDDTDD 193
Query: 206 EQSSCTKPD--FEAESAHVEDMPDLS 229
+ T P+ A + H ED P ++
Sbjct: 194 KSRRSTNPEMGITAPATHQEDEPGIA 219
>gi|359491315|ref|XP_002281757.2| PREDICTED: two-component response regulator-like APRR1-like [Vitis
vinifera]
Length = 556
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 81/129 (62%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
F+ R +R+LL + D + + LL SY+VT+V + + L +ID+IL EV
Sbjct: 21 FIDRSNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEV 80
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
DLP G +L +M + + IP+IMMS+QD VS V KC+ GAADYLVKP+R NEL N
Sbjct: 81 DLPMTKGMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 140
Query: 146 LWQHVWRRQ 154
LW H+WRR+
Sbjct: 141 LWTHMWRRR 149
>gi|297733942|emb|CBI15189.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 81/129 (62%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
F+ R +R+LL + D + + LL SY+VT+V + + L +ID+IL EV
Sbjct: 19 FIDRSNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEV 78
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
DLP G +L +M + + IP+IMMS+QD VS V KC+ GAADYLVKP+R NEL N
Sbjct: 79 DLPMTKGMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 138
Query: 146 LWQHVWRRQ 154
LW H+WRR+
Sbjct: 139 LWTHMWRRR 147
>gi|15240235|ref|NP_200946.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
gi|52783243|sp|Q9LKL2.1|APRR1_ARATH RecName: Full=Two-component response regulator-like APRR1; AltName:
Full=ABI3-interacting protein 1; AltName:
Full=Pseudo-response regulator 1; AltName: Full=Timing
of CAB expression 1
gi|9247020|gb|AAF86252.1|AF272039_1 timing of CAB expression 1 protein [Arabidopsis thaliana]
gi|7576354|dbj|BAA94547.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|9757859|dbj|BAB08493.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|20453054|gb|AAM19772.1| AT5g61380/mfb13_150 [Arabidopsis thaliana]
gi|29028744|gb|AAO64751.1| At5g61380/mfb13_150 [Arabidopsis thaliana]
gi|332010077|gb|AED97460.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
Length = 618
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 81/131 (61%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
+ F+ R +R+LL + D ++ V LL + SY+VTAV + + L +ID+IL
Sbjct: 11 DGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILA 70
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
E+DLP G +L + + + IPVIMMS QD V V KC+ GAADYLVKP+R NEL
Sbjct: 71 EIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNEL 130
Query: 144 RNLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 131 LNLWTHMWRRR 141
>gi|356565113|ref|XP_003550789.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 565
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 90/153 (58%), Gaps = 8/153 (5%)
Query: 9 EELKEMN------GNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVP 62
EEL +N G + F+ R +R+LL + D + + V LL SY+V +V
Sbjct: 8 EELINLNNISSNCGGNNSKSGDGFIDRSKVRILLCDNDSKSSEEVFTLLLGCSYQVISVR 67
Query: 63 DGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVM-EHEICKNIPVIMMSSQDSVST 121
+ + L + ID+IL EVDLP G LL + + E+C+ IPVIMMS+QD VS
Sbjct: 68 SARQVIDALNAEGQYIDMILAEVDLPIKKGMKLLKYIARDKELCR-IPVIMMSAQDEVSI 126
Query: 122 VYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ 154
V KC+ GAADYLVKP+R NEL NLW H+WRR+
Sbjct: 127 VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 159
>gi|147807228|emb|CAN70741.1| hypothetical protein VITISV_022754 [Vitis vinifera]
Length = 165
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 84/132 (63%), Gaps = 20/132 (15%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L M RVLLVE DDSTR ++ ALLR Y+VT +GL+AW +LK +IDL+LTEV+
Sbjct: 53 LVLMKSRVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDASNHIDLVLTEVN 112
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
LP +S +MS+ DS + V KC+ +GA D+LVKP+R+NEL+ L
Sbjct: 113 LPRLS--------------------VMSTDDSGALVLKCLSKGATDFLVKPIRKNELKFL 152
Query: 147 WQHVWRRQSSMV 158
WQH+WRR+ + V
Sbjct: 153 WQHIWRRRQNNV 164
>gi|281308382|gb|ADA58339.1| pseudo-response regulator 1a [Brassica rapa]
Length = 576
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 85/142 (59%)
Query: 13 EMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK 72
++NG + F+ R +R+LL + D ++ V LL + SY+VT+V + + L
Sbjct: 2 DLNGECKGGGGDGFIDRSRVRILLCDNDPNSLGEVFTLLSQCSYQVTSVKSARQVIDALN 61
Query: 73 GRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAAD 132
+ID+IL E+DLP G +L + + + IPVIMMS QD V V KC+ GAAD
Sbjct: 62 AEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAAD 121
Query: 133 YLVKPVRRNELRNLWQHVWRRQ 154
YLVKP+R NEL NLW H+WRR+
Sbjct: 122 YLVKPLRTNELLNLWTHMWRRR 143
>gi|147861344|emb|CAN83993.1| hypothetical protein VITISV_039545 [Vitis vinifera]
Length = 191
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 91/153 (59%), Gaps = 29/153 (18%)
Query: 2 GDVVLNDEELKEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAV 61
GD V +DEE M+ E + M RVLLVE DDSTR ++ ALLR Y+VT
Sbjct: 37 GDDVSDDEE--SMDCYEALV-------LMKSRVLLVENDDSTRYVIGALLRNCGYQVTET 87
Query: 62 PDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVST 121
+GL+AW +LK +IDL+LTEV+LP +S +MS+ DS +
Sbjct: 88 SNGLQAWRILKDXSNHIDLVLTEVNLPRLS--------------------VMSTXDSGAL 127
Query: 122 VYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ 154
V KC+ +GA D+LVKP R+NEL+ LWQH+WRR+
Sbjct: 128 VLKCLSKGATDFLVKPXRKNELKFLWQHIWRRR 160
>gi|327533492|gb|AEA92684.1| TOC1 [Phaseolus vulgaris]
Length = 561
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 88/148 (59%), Gaps = 3/148 (2%)
Query: 16 GNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRP 75
GN G + F+ R +R+LL + D ++ Q V LL SY+VT V + + L
Sbjct: 16 GNHG-KSGDGFIDRSKVRILLCDNDSNSSQEVFTLLLGCSYQVTLVKSPRQVIDALNAEG 74
Query: 76 RNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++I +IL E+DLP+ G +L + + + IPVIMMS+QD VS V KC+ GAADYLV
Sbjct: 75 QHIGIILAELDLPTKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLV 134
Query: 136 KPVRRNELRNLWQHVW--RRQSSMVSGN 161
KP+R NEL NLW H+W RR +V N
Sbjct: 135 KPLRTNELLNLWMHMWGRRRMLGLVEKN 162
>gi|297793691|ref|XP_002864730.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
gi|297310565|gb|EFH40989.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
Length = 623
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 80/131 (61%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
+ F+ R +R+LL + D + V LL + SY+VT+V + + L +ID+IL
Sbjct: 11 DGFIDRSRVRILLCDNDSKSLGEVFTLLSECSYQVTSVKSARQVIDALNAEGPDIDIILA 70
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
E+DLP G +L + + + IPVIMMS QD V V KC+ GAADYLVKP+R NEL
Sbjct: 71 EIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNEL 130
Query: 144 RNLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 131 LNLWTHMWRRR 141
>gi|357150179|ref|XP_003575369.1| PREDICTED: two-component response regulator-like PRR1-like
[Brachypodium distachyon]
Length = 521
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 141/271 (52%), Gaps = 19/271 (7%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
++F+ R +R+LL ++D + + V LLR SY+VT + VL +D+IL
Sbjct: 25 QSFVDRSKVRILLCDSDPDSSRDVLRLLRNCSYQVTCAKSPRQVINVLNCEGAEMDIILA 84
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
EVDLP F +L + ++ ++IP+IMMS++D VS V KC+ GAA+YLVKP+R NEL
Sbjct: 85 EVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNEL 144
Query: 144 RNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKG 203
NLW HVWRR+ + G ++ + ++ + +DA +N ++ + ++ E
Sbjct: 145 LNLWTHVWRRRRML--GLAEKNFFIDNLELVLSDPSDANTNSTT--LLSDETDDRPKENT 200
Query: 204 SDEQSSCTKPDFEAESA------HVEDMPDLSRQ---------LWGKSLQNDVKMQNHEA 248
+ E ++ + ++E+ A VE++PD+ ++ + ++ ++++ A
Sbjct: 201 NHETNTSNQHEYESPVAEFPKRDQVENLPDIMEYDNNAPYTGGMFSRPIKTNLRVGESSA 260
Query: 249 RVNYGQKSLVPVTEAQGSEVAACKEANTRAH 279
+ Y + S ++ + C ++ H
Sbjct: 261 FLAYVKSSTPTDSQLDSEQPRGCDRLDSMGH 291
>gi|302813242|ref|XP_002988307.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
gi|300144039|gb|EFJ10726.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
Length = 508
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 117/217 (53%), Gaps = 23/217 (10%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
R +R+LL + D +T Q V LL + SY+V+ V + EVL +DL+L+EV+
Sbjct: 9 FDRSRVRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVE 68
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
LP+ GF +L +++ E K+IP++MMS++D ++ V KC+ GAADYLVKP+R NEL NL
Sbjct: 69 LPNGRGFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNL 128
Query: 147 WQHVWRR-------QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
W H+WRR + ++ G+ + ++ + + TSE++ S F
Sbjct: 129 WTHMWRRRRMLGLTEKHILKGHLSSRNTIAEIFVSDTSESNTFSTDI------------F 176
Query: 200 IEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKS 236
E +D + KP E E E P+L L KS
Sbjct: 177 SEDSNDNKVKKLKPISEDE----EQAPELELSLTPKS 209
>gi|302760961|ref|XP_002963903.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
gi|300169171|gb|EFJ35774.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
Length = 505
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 101/165 (61%), Gaps = 7/165 (4%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
R +R+LL + D +T Q V LL + SY+V+ V + EVL +DL+L+EV+
Sbjct: 9 FDRSRVRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVE 68
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
LP+ GF +L +++ E K+IP++MMS++D ++ V KC+ GAADYLVKP+R NEL NL
Sbjct: 69 LPNGRGFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNL 128
Query: 147 WQHVWRR-------QSSMVSGNETQDESVGQQKIEATSENDAASN 184
W H+WRR + ++ G+ + ++ + + TSE++ S
Sbjct: 129 WTHMWRRRRMLGLTEKHILKGHLSSRNTIAEIFVSDTSESNTFST 173
>gi|6996313|emb|CAB75508.1| ABI3-interacting protein, AIP1 [Arabidopsis thaliana]
Length = 618
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 80/131 (61%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
+ F+ R +R+LL + D ++ V LL + SY+VTAV + + L +ID+IL
Sbjct: 11 DGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILA 70
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
E+DLP G +L + + + IPVIMMS QD V V KC+ GAADYLVKP+ NEL
Sbjct: 71 EIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLLTNEL 130
Query: 144 RNLWQHVWRRQ 154
NLW H+WRR+
Sbjct: 131 LNLWTHMWRRR 141
>gi|51571875|dbj|BAD38854.1| pseudo-response regulator 1 [Oryza sativa Japonica Group]
Length = 518
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 83/131 (63%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
+ F+ R +R+LL ++D S+ + V LL SY+VT + VL ID+IL
Sbjct: 20 QQFVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILA 79
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
EVDLP F +L + ++ ++IP+IMMS++D VS V KC+ GAA+YLVKP+R NEL
Sbjct: 80 EVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNEL 139
Query: 144 RNLWQHVWRRQ 154
NLW HVWRR+
Sbjct: 140 LNLWTHVWRRR 150
>gi|218191182|gb|EEC73609.1| hypothetical protein OsI_08092 [Oryza sativa Indica Group]
Length = 518
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 82/129 (63%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
F+ R +R+LL ++D S+ + V LL SY+VT + VL ID+IL EV
Sbjct: 22 FVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEV 81
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
DLP F +L + ++ ++IP+IMMS++D VS V KC+ GAA+YLVKP+R NEL N
Sbjct: 82 DLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 141
Query: 146 LWQHVWRRQ 154
LW HVWRR+
Sbjct: 142 LWTHVWRRR 150
>gi|323388709|gb|ADX60159.1| pseudoARR-B transcription factor [Zea mays]
gi|413923083|gb|AFW63015.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 83/136 (61%)
Query: 19 GIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI 78
G+ + F+ R +R+LL + D ++ + V LL SY VT + +L I
Sbjct: 11 GVGGAQQFVDRSKVRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEI 70
Query: 79 DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
D+IL EVDLP F +L + ++ ++IP+IMMS++D VS V KC+ GAA+YLVKP+
Sbjct: 71 DIILAEVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPL 130
Query: 139 RRNELRNLWQHVWRRQ 154
R NEL NLW HVWRR+
Sbjct: 131 RTNELLNLWTHVWRRR 146
>gi|115447337|ref|NP_001047448.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|68565719|sp|Q689G9.2|PRR1_ORYSJ RecName: Full=Two-component response regulator-like PRR1; AltName:
Full=Pseudo-response regulator 1; Short=OsPRR1
gi|47847546|dbj|BAD21598.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|47847675|dbj|BAD21456.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|113536979|dbj|BAF09362.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|222623253|gb|EEE57385.1| hypothetical protein OsJ_07546 [Oryza sativa Japonica Group]
Length = 518
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 82/129 (63%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
F+ R +R+LL ++D S+ + V LL SY+VT + VL ID+IL EV
Sbjct: 22 FVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEV 81
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
DLP F +L + ++ ++IP+IMMS++D VS V KC+ GAA+YLVKP+R NEL N
Sbjct: 82 DLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 141
Query: 146 LWQHVWRRQ 154
LW HVWRR+
Sbjct: 142 LWTHVWRRR 150
>gi|326531994|dbj|BAK01373.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|364285651|gb|AEW48243.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 82/131 (62%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
+ F+ R +R+LL ++D + Q V LL SY+VT + VL ID+IL
Sbjct: 23 QPFVDRSKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILA 82
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
EVDLP F +L + ++ ++IP+IMMS++D VS V KC+ GAA+YLVKP+R NEL
Sbjct: 83 EVDLPVSKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNEL 142
Query: 144 RNLWQHVWRRQ 154
NLW HVWRR+
Sbjct: 143 LNLWTHVWRRR 153
>gi|326522234|dbj|BAK07579.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 82/131 (62%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
+ F+ R +R+LL ++D + Q V LL SY+VT + VL ID+IL
Sbjct: 23 QPFVDRSKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILA 82
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
EVDLP F +L + ++ ++IP+IMMS++D VS V KC+ GAA+YLVKP+R NEL
Sbjct: 83 EVDLPVSKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNEL 142
Query: 144 RNLWQHVWRRQ 154
NLW HVWRR+
Sbjct: 143 LNLWTHVWRRR 153
>gi|364285649|gb|AEW48242.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 82/131 (62%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
+ F+ R +R+LL ++D + Q V LL SY+VT + VL ID+IL
Sbjct: 23 QPFVDRSKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILA 82
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
EVDLP F +L + ++ ++IP+IMMS++D VS V KC+ GAA+YLVKP+R NEL
Sbjct: 83 EVDLPVSKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNEL 142
Query: 144 RNLWQHVWRRQ 154
NLW HVWRR+
Sbjct: 143 LNLWTHVWRRR 153
>gi|281308392|gb|ADA58344.1| pseudo-response regulator 1b [Brassica rapa]
Length = 509
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 80/131 (61%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
+ F+ R +R+LL + D + V LL + SY+VT+V + + L +ID+IL
Sbjct: 11 DGFIDRSRVRILLCDNDSKSLGDVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILA 70
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
E+DLP G +L + + + IPVIMMS QD V V KC+ GAADYLVKP+R NEL
Sbjct: 71 EIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNEL 130
Query: 144 RNLWQHVWRRQ 154
NLW ++WRR+
Sbjct: 131 LNLWTYMWRRR 141
>gi|308913672|gb|ADO51646.1| TOC1b [Zea mays]
Length = 488
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
+ F+ R +R+LL + D S+ + V LL SY VT + +L ID+IL
Sbjct: 20 QQFVDRSKVRILLCDGDASSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILA 79
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
EVDLP F +L + ++ ++IP+IMMS++D VS V KC+ GAA+YLVKP+R NEL
Sbjct: 80 EVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNEL 139
Query: 144 RNLWQHVWRRQ 154
NLW HVWRR+
Sbjct: 140 LNLWTHVWRRR 150
>gi|226532758|ref|NP_001147823.1| LOC100281433 [Zea mays]
gi|195613968|gb|ACG28814.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 83/136 (61%)
Query: 19 GIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI 78
G+ + F+ R +R+LL + D ++ + V LL +Y VT + +L I
Sbjct: 11 GVGGAQQFVDRSKVRILLCDGDATSSREVLRLLCNCAYHVTCAKSPRQVVNILNYEGGEI 70
Query: 79 DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
D+IL EVDLP F +L + ++ ++IP+IMMS++D VS V KC+ GAA+YLVKP+
Sbjct: 71 DIILAEVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPL 130
Query: 139 RRNELRNLWQHVWRRQ 154
R NEL NLW HVWRR+
Sbjct: 131 RTNELLNLWTHVWRRR 146
>gi|316930963|gb|ADU60098.1| pseudo response regulator 1 [Zea mays]
Length = 515
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 83/136 (61%)
Query: 19 GIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI 78
G+ + F+ R +R+LL + D ++ + V LL +Y VT + +L I
Sbjct: 11 GVGGAQQFVDRSKVRILLCDGDATSPREVLRLLCNCAYHVTCAKSPRQVINILNYEGGEI 70
Query: 79 DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
D+IL EVDLP F +L + ++ ++IP+IMMS++D VS V KC+ GAA+YLVKP+
Sbjct: 71 DIILAEVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPL 130
Query: 139 RRNELRNLWQHVWRRQ 154
R NEL NLW HVWRR+
Sbjct: 131 RTNELLNLWTHVWRRR 146
>gi|325910794|dbj|BAJ83827.1| circadian response regulator 1b [Physcomitrella patens subsp.
patens]
Length = 701
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 63/77 (81%)
Query: 77 NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
N DL+LT+V +P +SG LL+ +M+ E CK +P+++MSS DS+ V++C+ +GA DYLVK
Sbjct: 8 NFDLVLTDVVMPCLSGVGLLSKMMKREACKRVPIVIMSSYDSLDIVFRCISKGACDYLVK 67
Query: 137 PVRRNELRNLWQHVWRR 153
PVR+NELRNLWQHVWR+
Sbjct: 68 PVRKNELRNLWQHVWRK 84
>gi|242062346|ref|XP_002452462.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
gi|241932293|gb|EES05438.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
Length = 524
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 81/131 (61%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
+ F+ R +R+LL + D ++ + V LL SY VT + +L ID+IL
Sbjct: 26 QQFVDRSKVRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILA 85
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
EVDLP F +L + ++ ++IP+IMMS++D VS V KC+ GAA+YLVKP+R NEL
Sbjct: 86 EVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNEL 145
Query: 144 RNLWQHVWRRQ 154
NLW HVWRR+
Sbjct: 146 LNLWTHVWRRR 156
>gi|384246881|gb|EIE20369.1| CheY-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 129
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRP-RNIDLILTEVDLPSI 90
+ +LLV+ + +R +V LLRK SY+VT G++A E+L+G+P LILT+V +P +
Sbjct: 5 VHILLVDDERLSRVVVGNLLRKCSYKVTEAGSGMEALEILRGQPPGTFSLILTDVMMPDV 64
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
G LL V E N+PVIMMS+ + TV++C+ GA DYL+KPV + E++++WQHV
Sbjct: 65 DGIELLRHVRGDEAWSNLPVIMMSANERTETVFECIRGGAEDYLLKPVTKKEVQHMWQHV 124
Query: 151 WRRQ 154
WRRQ
Sbjct: 125 WRRQ 128
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGR-PRNIDLILTEVDLPSISG 92
VLLV+ + TR ++++LL K YRVT+ DGL+A +L+G P L+LT+V +P ++G
Sbjct: 50 VLLVDDERLTRTVLSSLLLKCGYRVTSASDGLEALRLLRGSAPDTFQLVLTDVCMPELNG 109
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
LL+ V + + +PV+MMSS D TV +C+ +GA +YLVKPV + E++++WQHVWR
Sbjct: 110 IQLLSCVKQDANLRAVPVVMMSSVDQEETVAECVQQGAEEYLVKPVTKKEVQHIWQHVWR 169
Query: 153 RQSS 156
++ +
Sbjct: 170 KRCA 173
>gi|397911978|gb|AFO69282.1| pseudo-response regulator 1, partial [Hordeum vulgare]
Length = 491
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 77/122 (63%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+LL ++D + Q V LL SY+VT + VL ID+IL EVDLP
Sbjct: 1 RILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSKC 60
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
F +L + ++ ++IP+IMMS++D VS V KC+ GAA+YLVKP+R NEL NLW HVWR
Sbjct: 61 FKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWR 120
Query: 153 RQ 154
R+
Sbjct: 121 RR 122
>gi|442756047|gb|JAA70183.1| Hypothetical protein [Ixodes ricinus]
Length = 202
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 12/147 (8%)
Query: 81 ILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRR 140
LTEV +P SG LL +M H+ K IPVIMMSS DS+ V+KC+ GA D+L+KP+R+
Sbjct: 14 FLTEVVMPCFSGIGLLCKIMSHKTRKTIPVIMMSSHDSMGLVFKCLSEGAVDFLLKPIRK 73
Query: 141 NELRNLWQHVWRR-----QSSMVSGNETQD--ESVGQQKIEATSENDAASNHSSGYMACI 193
NEL+NLWQHVWRR S G +TQ +S G + ++ +D +N S+G A
Sbjct: 74 NELKNLWQHVWRRCQSSSGSGSEGGTQTQKSVKSKGTDMLGNSASDDGENNESNGLNA-- 131
Query: 194 QSKGEFIEKGSDEQSSCTKPDFEAESA 220
G+ + GS QSS TK E +S+
Sbjct: 132 ---GDGSDDGSGAQSSWTKRAVEVDSS 155
>gi|159487595|ref|XP_001701808.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
gi|158281027|gb|EDP06783.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
Length = 610
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 83/147 (56%), Gaps = 25/147 (17%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL---KGRPRNIDLILTEVDL 87
V+LVE D+ ++V LLRK SYRV+ DG A +VL K R +DLILT++ +
Sbjct: 5 GFHVVLVEDDNICLKVVEQLLRKLSYRVSTASDGAAALKVLADCKQRGDKVDLILTDILM 64
Query: 88 PSISGFALLTLVMEHEICKNIPVI----------------------MMSSQDSVSTVYKC 125
P ++GF L+ V+ E +IPV+ +MSSQDS +V +
Sbjct: 65 PEVTGFDLINEVVHGETFADIPVVASGTFLGFGRRTVRTVAWSRCQVMSSQDSQESVLQA 124
Query: 126 MMRGAADYLVKPVRRNELRNLWQHVWR 152
GAADYL+KP+R+NEL LWQHVWR
Sbjct: 125 FQAGAADYLIKPIRKNELATLWQHVWR 151
>gi|384252785|gb|EIE26260.1| hypothetical protein COCSUDRAFT_64410 [Coccomyxa subellipsoidea
C-169]
Length = 428
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN-IDLILTEVDLPSISG 92
VLL E DD T +IV LL++ +YRVT +G +A ++L+ ++ DLILT++ +P + G
Sbjct: 15 VLLAEDDDLTLRIVEQLLKQCNYRVTVARNGQEALDILQHNDKHCFDLILTDIMMPKVDG 74
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
L+ V + ++ ++PVI+MSS+ S + K GAADYL+KP+R+NE+ LW H+WR
Sbjct: 75 MDLVCEVNQRKVWSHLPVIVMSSEQSQEAICKAFTVGAADYLIKPIRKNEVATLWHHIWR 134
Query: 153 RQSSMVSGNE 162
+ M +G E
Sbjct: 135 K--VMAAGTE 142
>gi|384250534|gb|EIE24013.1| hypothetical protein COCSUDRAFT_65695 [Coccomyxa subellipsoidea
C-169]
Length = 1818
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 10/146 (6%)
Query: 16 GNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK--- 72
G G A + L +LRVL+V++ S RQ V ALLRK +Y+V V +A ++LK
Sbjct: 736 GGAGAAAVD-ILSPQSLRVLVVDSKASARQEVVALLRKCTYQVMEVKSTAEALQLLKDQQ 794
Query: 73 ---GRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRG 129
G P +DLIL E D P+ + LL +E ++ + +PV++MSSQ+ + C+ G
Sbjct: 795 ARDGAP-GVDLILKEHDPPAANACRLLRRTLEDDVLRTVPVVVMSSQEDRDVMVACLQLG 853
Query: 130 AADYLVKPVRRNELRNLWQHV--WRR 153
AADY+++P+R NELRNLW V WRR
Sbjct: 854 AADYMIRPLRHNELRNLWARVYWWRR 879
>gi|302854384|ref|XP_002958700.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
gi|300255940|gb|EFJ40220.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
Length = 124
Score = 109 bits (272), Expect = 4e-21, Method: Composition-based stats.
Identities = 56/124 (45%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL---KGRPRNIDLILTEVD 86
M VLLVE D T + V LLRK +Y+VT +G +A +VL + +DLILT++
Sbjct: 1 MEFHVLLVEDDRVTLKTVEQLLRKCNYKVTCAANGREAIKVLTACRHSGVKVDLILTDIL 60
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
+P ++GF L+ V+ + ++PV++MSSQDS V + GAADYL+KP+R+NEL L
Sbjct: 61 MPEVTGFDLINEVVHGDTFCDVPVVVMSSQDSQENVLQAFQAGAADYLIKPIRKNELATL 120
Query: 147 WQHV 150
WQHV
Sbjct: 121 WQHV 124
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+ VL+V+ + R + ++LLR+ YRVT G +A E+L+ R ++LT+V +P I
Sbjct: 30 VHVLVVDDERICRTVTSSLLRRCGYRVTMAESGEEALELLR-RGTEFHMLLTDVMMPGID 88
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
G ALL +V E +++PV+MMS+ + TV++C+ GA DYL+KPV R ++++W HVW
Sbjct: 89 GPALLQIVRNDERLRDMPVVMMSANEHSDTVFRCIQHGAEDYLLKPVSRRAVKHMWTHVW 148
Query: 152 RRQSSMVSGNETQDESVGQQKIE 174
R+ VS Q G++ +E
Sbjct: 149 RKSQVNVSRTVPQLGEDGEELLE 171
>gi|168065350|ref|XP_001784616.1| circadian clock protein PRR3 [Physcomitrella patens subsp. patens]
gi|162663848|gb|EDQ50591.1| circadian clock protein PRR3 [Physcomitrella patens subsp. patens]
Length = 774
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 63/86 (73%), Gaps = 9/86 (10%)
Query: 77 NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVI---------MMSSQDSVSTVYKCMM 127
N DL+LT+V +P +SG LL+ +M+ E CK +P++ +MSS DS+ V++C+
Sbjct: 20 NFDLVLTDVVMPCLSGVGLLSKMMKREACKRVPIVSELSYMLDAVMSSYDSLDIVFRCIS 79
Query: 128 RGAADYLVKPVRRNELRNLWQHVWRR 153
+GA DYLVKPVR+NELRNLWQHVWR+
Sbjct: 80 KGACDYLVKPVRKNELRNLWQHVWRK 105
>gi|145351734|ref|XP_001420222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580455|gb|ABO98515.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 145
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + R + ++LLRK YRVT G +A E+L+ R L+LT+V +P I G
Sbjct: 25 VLVVDDERICRTVTSSLLRKCGYRVTTAESGEEALELLR-RGTEFHLLLTDVMMPGIDGP 83
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
ALL +V E +++PVIMMS+ + TV++C+ GA DYL+KPV R ++++WQHVWR+
Sbjct: 84 ALLQIVRNDERLRDMPVIMMSANEHSDTVFRCIQYGAEDYLLKPVSRKAVKHMWQHVWRK 143
>gi|414879149|tpg|DAA56280.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 584
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 7/154 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +LRK SY VT A ++L+ R D+++++V++P +
Sbjct: 12 GLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDVNMPDM 71
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL L+ + ++PVIMMS S V K + GA DYL+KPVR ELRN+WQHV
Sbjct: 72 DGFKLLELI---GLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 151 WRRQSSMVS---GNETQDE-SVGQQKIEATSEND 180
+R++ V GN++ D+ + + +E E D
Sbjct: 129 YRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERD 162
>gi|226503033|ref|NP_001152300.1| two-component response regulator ARR11 [Zea mays]
gi|195654849|gb|ACG46892.1| two-component response regulator ARR11 [Zea mays]
Length = 584
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 7/154 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +LRK SY VT A ++L+ R D+++++V++P +
Sbjct: 12 GLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDVNMPDM 71
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL L+ + ++PVIMMS S V K + GA DYL+KPVR ELRN+WQHV
Sbjct: 72 DGFKLLELI---GLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 151 WRRQSSMVS---GNETQDE-SVGQQKIEATSEND 180
+R++ V GN++ D+ + + +E E D
Sbjct: 129 YRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERD 162
>gi|242059591|ref|XP_002458941.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
gi|241930916|gb|EES04061.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
Length = 579
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 86/139 (61%), Gaps = 6/139 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +LRK SY VT A ++L+ R D+++++V++P +
Sbjct: 12 GLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVALQILRERRNKFDIVISDVNMPDM 71
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL L+ + ++PVIMMS S V K + GA DYL+KPVR ELRN+WQHV
Sbjct: 72 DGFKLLELI---GLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 151 WRRQSSMVS---GNETQDE 166
+R++ V GN++ D+
Sbjct: 129 YRKKMHEVKEIEGNDSCDD 147
>gi|339778519|gb|AEK06141.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%)
Query: 59 TAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDS 118
T+V + + L ID+IL+EVD+P G +L +M + + IPVIMMS+QD
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 119 VSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDE 166
VS V KC+ GAADYLVKP+R NEL NLW H+WRR+ M S DE
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMMPSFQCVLDE 108
>gi|339778525|gb|AEK06144.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%)
Query: 59 TAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDS 118
T+V + + L ID+IL+EVD+P G +L +M + + IPVIMMS+QD
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 119 VSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDE 166
VS V KC+ GAADYLVKP+R NEL NLW H+WRR+ M S DE
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMMPSFQCVLDE 108
>gi|356546098|ref|XP_003541468.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 680
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + ++ LLRK Y VT +KA E+L+ DL++++V++P
Sbjct: 9 VGMRVLAVDDDKTCLTVLENLLRKCQYNVTTTNQAIKALEMLRKNRNKFDLVISDVNMPD 68
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S V + +++GA DYL KPVR EL+N+WQH
Sbjct: 69 MDGFKLLELV---GLEMDLPVIMLSGYGDKERVMRGVIQGACDYLTKPVRIEELQNIWQH 125
Query: 150 VWRRQSSMVSGNETQDESVG 169
V RR+ N+T E G
Sbjct: 126 VLRRRIDSKDKNKTASEGKG 145
>gi|339778533|gb|AEK06148.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%)
Query: 59 TAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDS 118
T+V + + L ID+IL+EVD+P G +L +M + + IPVIMMS+QD
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 119 VSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDE 166
VS V KC+ GAADYLVKP+R NEL NLW H+WRR+ M S DE
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMMPSFQCVLDE 108
>gi|339778509|gb|AEK06136.1| timing of cab 1 [Populus balsamifera]
gi|339778517|gb|AEK06140.1| timing of cab 1 [Populus balsamifera]
gi|339778521|gb|AEK06142.1| timing of cab 1 [Populus balsamifera]
gi|339778529|gb|AEK06146.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%)
Query: 59 TAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDS 118
T+V + + L ID+IL+EVD+P G +L +M + + IPVIMMS+QD
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 119 VSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDE 166
VS V KC+ GAADYLVKP+R NEL NLW H+WRR+ M S DE
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMMPSFQCVLDE 108
>gi|339778505|gb|AEK06134.1| timing of cab 1 [Populus balsamifera]
gi|339778507|gb|AEK06135.1| timing of cab 1 [Populus balsamifera]
gi|339778511|gb|AEK06137.1| timing of cab 1 [Populus balsamifera]
gi|339778513|gb|AEK06138.1| timing of cab 1 [Populus balsamifera]
gi|339778515|gb|AEK06139.1| timing of cab 1 [Populus balsamifera]
gi|339778523|gb|AEK06143.1| timing of cab 1 [Populus balsamifera]
gi|339778527|gb|AEK06145.1| timing of cab 1 [Populus balsamifera]
gi|339778531|gb|AEK06147.1| timing of cab 1 [Populus balsamifera]
gi|339778535|gb|AEK06149.1| timing of cab 1 [Populus balsamifera]
gi|339778539|gb|AEK06151.1| timing of cab 1 [Populus balsamifera]
gi|339778541|gb|AEK06152.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%)
Query: 59 TAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDS 118
T+V + + L ID+IL+EVD+P G +L +M + + IPVIMMS+QD
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 119 VSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDE 166
VS V KC+ GAADYLVKP+R NEL NLW H+WRR+ M S DE
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMMPSFQCVLDE 108
>gi|339778501|gb|AEK06132.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%)
Query: 59 TAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDS 118
T+V + + L ID+IL+EVD+P G +L +M + + IPVIMMS+QD
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 119 VSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDE 166
VS V KC+ GAADYLVKP+R NEL NLW H+WRR+ M S DE
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMMPSFQCVLDE 108
>gi|339778503|gb|AEK06133.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%)
Query: 59 TAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDS 118
T+V + + L ID+IL+EVD+P G +L +M + + IPVIMMS+QD
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 119 VSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDE 166
VS V KC+ GAADYLVKP+R NEL NLW H+WRR+ M S DE
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMMPSFQCVLDE 108
>gi|384254096|gb|EIE27570.1| CheY-like protein [Coccomyxa subellipsoidea C-169]
Length = 302
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 92/146 (63%), Gaps = 11/146 (7%)
Query: 13 EMNGNEGIAK---WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWE 69
EM+G E +A+ WE F L+VL+V+ D ++V +LR+ +Y+VT P+G A E
Sbjct: 35 EMSG-EDLARSDSWEMF--PAGLKVLVVDDDPLCLKVVEHMLRRCNYQVTTCPNGKAALE 91
Query: 70 VLKGRPRNIDLILTEVDLPSISGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMR 128
L+ R + DL+L++V +P + GF LL EH + ++PVIMMSS + V + +
Sbjct: 92 KLRDRSVHFDLVLSDVYMPDMDGFKLL----EHIGLELDLPVIMMSSNGETNVVLRGVTH 147
Query: 129 GAADYLVKPVRRNELRNLWQHVWRRQ 154
GA D+L+KPVR ELRN+WQHV RR+
Sbjct: 148 GAVDFLIKPVRVEELRNVWQHVVRRK 173
>gi|339778537|gb|AEK06150.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%)
Query: 59 TAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDS 118
T+V + + L ID+IL+EVD+P G +L +M + + IPVIMMS+QD
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 119 VSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDE 166
VS V KC+ GAADYLVKP+R NEL NLW H+WRR+ M S DE
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMMPSFQCVLDE 108
>gi|303287506|ref|XP_003063042.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
gi|226455678|gb|EEH52981.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
Length = 544
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 79/125 (63%), Gaps = 5/125 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D +IV +L++ Y VT G +A E L+ R + D++L++V +P +
Sbjct: 14 GLRVLVVDDDPLCLRIVEKMLKRCQYEVTTFSRGAEALETLRARRDDFDIVLSDVHMPDM 73
Query: 91 SGFALLTLVMEHEICK-NIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PV+MMS+ + V + ++ GA DYL+KPVR ELRN+WQH
Sbjct: 74 DGFKLL----EHIALELDVPVMMMSANCATDVVLRGIIHGAVDYLLKPVRLEELRNIWQH 129
Query: 150 VWRRQ 154
V RRQ
Sbjct: 130 VVRRQ 134
>gi|357126386|ref|XP_003564868.1| PREDICTED: uncharacterized protein LOC100824670 [Brachypodium
distachyon]
Length = 577
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 82/136 (60%), Gaps = 5/136 (3%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +LRK SY VT A E+L+ R D+++++V++P +
Sbjct: 11 GLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALEILRERKSKFDIVISDVNMPDM 70
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS S V K + GA DYL+KPVR ELRN+WQH
Sbjct: 71 DGFKLL----EHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQH 126
Query: 150 VWRRQSSMVSGNETQD 165
V+R++ V E D
Sbjct: 127 VYRKRMHEVKEIEGHD 142
>gi|145340805|ref|XP_001415508.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575731|gb|ABO93800.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 270
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 100/179 (55%), Gaps = 16/179 (8%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
L VL+V+ D ++V +L+ Y+VTA A E+L+ R D++L++V +P +
Sbjct: 4 GLGVLVVDDDLLCLKVVEKMLKACKYKVTACSTAKTALEILRTRKEEFDIVLSDVHMPDM 63
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL ++ + E+ +PV+MMS+ S V + ++ GA DYL+KPVR ELRN+WQHV
Sbjct: 64 DGFKLLEII-QFELA--LPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQHV 120
Query: 151 WRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSS 209
RR S +S G + +EA+S + A S SK E +++ + E SS
Sbjct: 121 VRRDYS-------SAKSSGSEDVEASSPSKRAKTSGS------NSKSEEVDRTASEMSS 166
>gi|56784051|dbj|BAD82798.1| putative response regulator 11 [Oryza sativa Japonica Group]
Length = 586
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 86/140 (61%), Gaps = 8/140 (5%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +LRK SY VT A ++L+ R D+++++V++P +
Sbjct: 9 GLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNMPDM 68
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS S V K + GA DYL+KPVR ELRN+WQH
Sbjct: 69 DGFKLL----EHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQH 124
Query: 150 VWRRQSSMVS---GNETQDE 166
V+R++ V GN++ D+
Sbjct: 125 VYRKKMHEVKEIEGNDSCDD 144
>gi|297825553|ref|XP_002880659.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
gi|297326498|gb|EFH56918.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
Length = 611
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 89/157 (56%), Gaps = 5/157 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +I+ LLR Y VT + KA E+L+ DL++++VD+P
Sbjct: 15 VGMRVLAVDDDQTCLKILETLLRHCQYHVTTTNEAQKALELLRENKNKFDLVISDVDMPD 74
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 75 MDGFKLLELV---GLEMDLPVIMLSAHSDPKFVMKGVTHGACDYLLKPVRIEELKNIWQH 131
Query: 150 VWRRQSSMVSGNETQD--ESVGQQKIEATSENDAASN 184
V R + G+ D + G + + + +N+ +N
Sbjct: 132 VVRSRFDKNRGSNNGDKRDGSGNEGVGYSDQNNGRAN 168
>gi|34979117|gb|AAQ83694.1| pseudo-response regulator protein [Oryza sativa Indica Group]
Length = 640
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNI-PVIMMSSQDSVSTVYKCMMRGAADYLVK 136
I +LTEV +P +SG +LL+ +M + I PVIMMSS D++ TV+KC+ +GA D+LVK
Sbjct: 5 IVFVLTEVVMPGVSGISLLSRIMNPQYFARIFPVIMMSSNDAMGTVFKCLSKGAVDFLVK 64
Query: 137 PVRRNELRNLWQHVWRR 153
P+R+NEL+NLWQHVWRR
Sbjct: 65 PIRKNELKNLWQHVWRR 81
>gi|218189558|gb|EEC71985.1| hypothetical protein OsI_04831 [Oryza sativa Indica Group]
Length = 582
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 86/140 (61%), Gaps = 8/140 (5%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +LRK SY VT A ++L+ R D+++++V++P +
Sbjct: 9 GLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNMPDM 68
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS S V K + GA DYL+KPVR ELRN+WQH
Sbjct: 69 DGFKLL----EHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQH 124
Query: 150 VWRRQSSMVS---GNETQDE 166
V+R++ V GN++ D+
Sbjct: 125 VYRKKMHEVKEIEGNDSCDD 144
>gi|118790785|tpd|FAA00259.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|222619710|gb|EEE55842.1| hypothetical protein OsJ_04457 [Oryza sativa Japonica Group]
Length = 582
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 86/140 (61%), Gaps = 8/140 (5%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +LRK SY VT A ++L+ R D+++++V++P +
Sbjct: 9 GLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNMPDM 68
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS S V K + GA DYL+KPVR ELRN+WQH
Sbjct: 69 DGFKLL----EHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQH 124
Query: 150 VWRRQSSMVS---GNETQDE 166
V+R++ V GN++ D+
Sbjct: 125 VYRKKMHEVKEIEGNDSCDD 144
>gi|298103722|emb|CBM42562.1| putative B-type response regulator 19 [Populus x canadensis]
Length = 685
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLRK Y VT + A E+L+ DL++++V++P
Sbjct: 19 VGMRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVNMPD 78
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+SS VYK + GA DYL+KPVR EL+N+WQH
Sbjct: 79 MDGFKLLELV---GLEMDLPVIMLSSHGDKEFVYKGITHGAVDYLLKPVRLEELKNIWQH 135
Query: 150 VWRRQ 154
V RR+
Sbjct: 136 VIRRK 140
>gi|302783917|ref|XP_002973731.1| type B response regulator [Selaginella moellendorffii]
gi|300158769|gb|EFJ25391.1| type B response regulator [Selaginella moellendorffii]
Length = 705
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 103/186 (55%), Gaps = 6/186 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL+V+ D +T I+ A+LR+ Y VT A +L+ + DL++++V +P
Sbjct: 33 VGMRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKNDFDLVISDVYMPD 92
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIMMS+ + V K + GA DYL+KPVR ELRN+WQH
Sbjct: 93 MDGFKLLELV---GLEMDLPVIMMSTDGDYNNVMKGITHGACDYLLKPVRMEELRNIWQH 149
Query: 150 VWRRQSSMVSGNETQDESVGQQKIEATSENDA--ASNHSSGYMACIQSKGEFIEKGSDEQ 207
+ R++ + ET + K++ +D S+ S ++ + E ++ S++
Sbjct: 150 LVRKRKNEARETETLTPAEA-DKLKGGGGDDVEHLSSACSKKRKDVKEEDEGVDHDSEDP 208
Query: 208 SSCTKP 213
SS KP
Sbjct: 209 SSLKKP 214
>gi|240254528|ref|NP_180090.6| response regulator 12 [Arabidopsis thaliana]
gi|378405150|sp|P62598.2|ARR12_ARATH RecName: Full=Two-component response regulator ARR12
gi|330252573|gb|AEC07667.1| response regulator 12 [Arabidopsis thaliana]
Length = 596
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 6/158 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +I+ +LLR Y VT KA E+L+ DL++++VD+P
Sbjct: 15 VGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPD 74
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 75 MDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQH 131
Query: 150 VWRRQSSMVSG---NETQDESVGQQKIEATSENDAASN 184
V R + G N + + G + + + +N+ N
Sbjct: 132 VVRSRFDKNRGSNNNGDKRDGSGNEGVGNSDQNNGKGN 169
>gi|449443269|ref|XP_004139402.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449494037|ref|XP_004159429.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 699
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 80/129 (62%), Gaps = 3/129 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLRK Y VT ++A ++L+ DL++++V++P
Sbjct: 22 IGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVQALKMLRENKNRFDLVISDVNMPD 81
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ + V K ++ GA DYL+KPVR EL+N+WQH
Sbjct: 82 MDGFKLLELV---GLEMDLPVIMLSAHSNTELVKKGVLHGACDYLLKPVRIEELKNIWQH 138
Query: 150 VWRRQSSMV 158
V RR+ V
Sbjct: 139 VLRRKKPSV 147
>gi|224088246|ref|XP_002308388.1| predicted protein [Populus trichocarpa]
gi|222854364|gb|EEE91911.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +R+L V+ D +++ LLRK Y VT + A E+L+ DL++++V++P
Sbjct: 19 VGMRILAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVNMPD 78
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+SS VYK + GA DYL+KPVR EL+N+WQH
Sbjct: 79 MDGFKLLELV---GLEMDLPVIMLSSHGDKEFVYKGVTHGAVDYLLKPVRMEELKNIWQH 135
Query: 150 VWRRQ 154
V RR+
Sbjct: 136 VIRRK 140
>gi|255084361|ref|XP_002508755.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
gi|226524032|gb|ACO70013.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
Length = 488
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 5/139 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ LRVL+V+ D +IV +L++ Y VT G +A + L+ R + D++L++V +P
Sbjct: 12 IGLRVLVVDDDPLCLKIVEKMLKRCQYEVTTFSRGAEALKTLRERKDDFDIVLSDVHMPD 71
Query: 90 ISGFALLTLVMEHEICK-NIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
+ GF LL EH + +IPV+MMS+ + V + ++ GA DYL+KPVR ELRN+WQ
Sbjct: 72 MDGFKLL----EHIALELDIPVMMMSANCATDVVLRGIIHGAVDYLLKPVRIEELRNIWQ 127
Query: 149 HVWRRQSSMVSGNETQDES 167
HV RR+ GN E
Sbjct: 128 HVVRRKRESSQGNLRSGEG 146
>gi|357125033|ref|XP_003564200.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 654
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 3/143 (2%)
Query: 14 MNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKG 73
M +G+ E + +RVL V+ D +++ LLR+ Y VTA + A ++L+
Sbjct: 8 MEARKGLIAREMDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAITALKLLRE 67
Query: 74 RPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADY 133
DL++++V +P + GF LL LV + ++PVIM+S TV K + GA DY
Sbjct: 68 NKDMFDLVISDVHMPDMDGFKLLELV---GLEMDLPVIMLSVNGETKTVLKGITHGACDY 124
Query: 134 LVKPVRRNELRNLWQHVWRRQSS 156
L+KPVR ELRN+WQHV RR+ S
Sbjct: 125 LLKPVRIEELRNVWQHVVRRKFS 147
>gi|224143990|ref|XP_002325148.1| type-b response regulator [Populus trichocarpa]
gi|222866582|gb|EEF03713.1| type-b response regulator [Populus trichocarpa]
Length = 707
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLRK Y VT + A E+L+ DL++++V++P
Sbjct: 19 VGMRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVNMPD 78
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+SS V+K + GA DYL+KPVR EL+N+WQH
Sbjct: 79 MDGFKLLELV---GLEMDLPVIMLSSHGDKEFVFKGITHGAVDYLLKPVRLEELKNIWQH 135
Query: 150 VWRRQ 154
V RR+
Sbjct: 136 VIRRK 140
>gi|302788023|ref|XP_002975781.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
gi|300156782|gb|EFJ23410.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
Length = 660
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 6/184 (3%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+RVL+V+ D +T I+ A+LR+ Y VT A +L+ + DL++++V +P +
Sbjct: 1 MRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKNDFDLVISDVYMPDMD 60
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
GF LL LV + ++PVIMMS+ + V K + GA DYL+KPVR ELRN+WQH+
Sbjct: 61 GFKLLELV---GLEMDLPVIMMSTDGDYNNVMKGITHGACDYLLKPVRMEELRNIWQHLV 117
Query: 152 RRQSSMVSGNETQDESVGQQKIEATSENDA--ASNHSSGYMACIQSKGEFIEKGSDEQSS 209
R++ + ET + K++ +D S+ S ++ + E ++ S++ SS
Sbjct: 118 RKRKNEARETETLTPAEA-DKLKGGGGDDVEHLSSACSKKRKDVKEEDEGVDHDSEDPSS 176
Query: 210 CTKP 213
KP
Sbjct: 177 LKKP 180
>gi|255547918|ref|XP_002515016.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546067|gb|EEF47570.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 584
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 10/163 (6%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L+K SY VT A +L+ R D+++++V++P +
Sbjct: 16 GLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALYLLRERKDGYDIVISDVNMPDM 75
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS S V K + GA DYL+KP+R ELRN+WQHV
Sbjct: 76 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 151 WRRQSSMVSGNETQDESVGQQKIEATSENDAASNHS-SGYMAC 192
+R++ +E +D + + +E+ S+HS GY+ C
Sbjct: 133 FRKKI-----HEVRDIEI-LEGMESIQMARIGSDHSDDGYLFC 169
>gi|356519365|ref|XP_003528343.1| PREDICTED: uncharacterized protein LOC100804937 [Glycine max]
Length = 633
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 103/192 (53%), Gaps = 14/192 (7%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ LRVL+V+ D +T +I+ + + YRVT + A +L+ R D++L++V +P
Sbjct: 10 VGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVHMPD 69
Query: 90 ISGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
+ G+ LL EH + ++PVIMMS + S V K + GA DYL+KPVR ELRN+WQ
Sbjct: 70 MDGYKLL----EHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQ 125
Query: 149 HVWRR-------QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIE 201
HV R+ Q + S ++ G E TS DAA + + + K E IE
Sbjct: 126 HVVRKFWNDSKEQDNSGSMEDSDQNKRGNDDAEYTSVADAAVVKAPKKRSSL--KEEDIE 183
Query: 202 KGSDEQSSCTKP 213
SD+ ++ KP
Sbjct: 184 LESDDPAASKKP 195
>gi|25365080|pir||C84645 hypothetical protein At2g25180 [imported] - Arabidopsis thaliana
Length = 573
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 6/158 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +I+ +LLR Y VT KA E+L+ DL++++VD+P
Sbjct: 15 VGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPD 74
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 75 MDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQH 131
Query: 150 VWRRQSSMVSG---NETQDESVGQQKIEATSENDAASN 184
V R + G N + + G + + + N+ N
Sbjct: 132 VVRSRFDKNRGSNNNGDKRDGSGNEGVGNSDPNNGKGN 169
>gi|255565035|ref|XP_002523510.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223537217|gb|EEF38849.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 676
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LL+K Y+VT ++A ++L+ DL++++V++P
Sbjct: 16 VGMRVLAVDDDPICLKVLDTLLKKCQYQVTTTNQAIQALKMLRENRNKYDLVISDVNMPD 75
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ VYK + GA DYL+KPVR EL+N+WQH
Sbjct: 76 MDGFKLLELV---GLEMDLPVIMLSAHSDKELVYKGVTHGAVDYLLKPVRIEELKNIWQH 132
Query: 150 VWRRQ 154
V RR+
Sbjct: 133 VIRRK 137
>gi|356502390|ref|XP_003520002.1| PREDICTED: uncharacterized protein LOC100817125 [Glycine max]
Length = 633
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 103/191 (53%), Gaps = 13/191 (6%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ LRVL+V+ D +T +I+ + + YRVT + A +L+ R D++L++V +P
Sbjct: 12 VGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVHMPD 71
Query: 90 ISGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
+ G+ LL EH + ++PVIMMS + S V K + GA DYL+KPVR ELRN+WQ
Sbjct: 72 MDGYKLL----EHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQ 127
Query: 149 HVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQS 208
HV R+ + N+ D S + S+ + N + Y + + E + K ++S
Sbjct: 128 HVVRK---FWNDNKELDNSGSMED----SDRNKWGNDDAEYTSSVADAAEVV-KAPKKRS 179
Query: 209 SCTKPDFEAES 219
S + D E ES
Sbjct: 180 SLKEEDIELES 190
>gi|359484783|ref|XP_002270833.2| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 712
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + ++ LLR+ Y+VT + A ++L+ N DL++++V +P
Sbjct: 22 VGMRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITALKMLRENKNNFDLVISDVSMPD 81
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+SS V + + GA DYL+KPVR EL+N+WQH
Sbjct: 82 MDGFKLLELV---GLEMDLPVIMLSSHSDPKLVMRGITHGACDYLLKPVRIEELKNIWQH 138
Query: 150 VWRRQ 154
V RR+
Sbjct: 139 VIRRK 143
>gi|356554201|ref|XP_003545437.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 681
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + ++ LLR+ Y VT + + A ++L+ DL++++V +P
Sbjct: 18 IGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALKLLRENKTMFDLVISDVHMPD 77
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S D V K + GA DYL+KPVR EL+N+WQH
Sbjct: 78 MDGFKLLELV---GLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQH 134
Query: 150 VWRRQ 154
V RR+
Sbjct: 135 VIRRK 139
>gi|323388735|gb|ADX60172.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 87/152 (57%), Gaps = 5/152 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +I+ LL + Y VT A ++L+ + DL++++V +P
Sbjct: 24 VGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVISDVHMPD 83
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ TV K + GA DYL+KPVR +LR +WQH
Sbjct: 84 MDGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRTIWQH 140
Query: 150 VWRRQS--SMVSGNETQDESVGQQKIEATSEN 179
V RR+S + SGN+ D Q + A +N
Sbjct: 141 VVRRRSCDAKNSGNDNDDSGKKLQVVSAEGDN 172
>gi|323388705|gb|ADX60157.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 87/152 (57%), Gaps = 5/152 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +I+ LL + Y VT A ++L+ + DL++++V +P
Sbjct: 24 VGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVISDVHMPD 83
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ TV K + GA DYL+KPVR +LR +WQH
Sbjct: 84 MDGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRTIWQH 140
Query: 150 VWRRQS--SMVSGNETQDESVGQQKIEATSEN 179
V RR+S + SGN+ D Q + A +N
Sbjct: 141 VVRRRSCDAKNSGNDNDDSGKKLQVVSAEGDN 172
>gi|297735895|emb|CBI18671.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + ++ LLR+ Y+VT + A ++L+ N DL++++V +P
Sbjct: 22 VGMRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITALKMLRENKNNFDLVISDVSMPD 81
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+SS V + + GA DYL+KPVR EL+N+WQH
Sbjct: 82 MDGFKLLELV---GLEMDLPVIMLSSHSDPKLVMRGITHGACDYLLKPVRIEELKNIWQH 138
Query: 150 VWRRQ 154
V RR+
Sbjct: 139 VIRRK 143
>gi|449457923|ref|XP_004146697.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449505373|ref|XP_004162449.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 697
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ +LLRK Y VT ++A +L+ DL++++V++P
Sbjct: 22 VGMRVLAVDDDPICLKVLESLLRKCQYHVTTTKQSIEALRMLRENRNKFDLVISDVNMPD 81
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 82 MDGFKLLELV---GLEMDLPVIMLSAHSDTELVMKGIAHGACDYLLKPVRIEELKNIWQH 138
Query: 150 VWRRQ 154
V RR+
Sbjct: 139 VIRRK 143
>gi|356556600|ref|XP_003546612.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 697
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLRK Y VT ++A ++L+ DL++++V++P
Sbjct: 17 VGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALKMLRENRNKFDLVISDVNMPD 76
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
I GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 77 IDGFKLLELV---GLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQH 133
Query: 150 VWRRQ 154
V RR+
Sbjct: 134 VVRRK 138
>gi|356562101|ref|XP_003549312.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 667
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + ++ LLR+ Y VT + + A +L+ DL++++V +P
Sbjct: 18 IGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALNLLRENKTMFDLVISDVHMPD 77
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S D V K + GA DYL+KPVR EL+N+WQH
Sbjct: 78 MDGFKLLELV---GLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQH 134
Query: 150 VWRRQ 154
V RR+
Sbjct: 135 VIRRK 139
>gi|357137423|ref|XP_003570300.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 671
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLR+ Y VTA + A +L+ DL++++V +P
Sbjct: 19 VGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAVIALRMLRENRDMFDLVISDVHMPD 78
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S TV K + GA DYL+KPVR ELRN+WQH
Sbjct: 79 MDGFKLLELV---GLEMDLPVIMLSGNGETKTVMKGITHGACDYLLKPVRIEELRNIWQH 135
Query: 150 VWRRQSS 156
V RR+ S
Sbjct: 136 VVRRKFS 142
>gi|225425924|ref|XP_002267616.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
gi|297738324|emb|CBI27525.3| unnamed protein product [Vitis vinifera]
Length = 594
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 86/143 (60%), Gaps = 4/143 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L+K Y VT A +L+ R D+++++V++P +
Sbjct: 16 GLRVLVVDDDPTWLKILEKMLKKCLYEVTICGLARDALNLLRERKDGYDIVISDVNMPDM 75
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL LV + ++PVIMMS S V K + GA DYL+KP+R ELRN+WQHV
Sbjct: 76 DGFKLLELV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 151 WRRQSSMVSGNETQDESVGQQKI 173
+R++ + V E+ ES+ +I
Sbjct: 133 FRKKINEVRDIESH-ESIDDFQI 154
>gi|356530639|ref|XP_003533888.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 676
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLRK Y VT ++A +L+ DL++++V++P
Sbjct: 17 VGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDLVISDVNMPD 76
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
I GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 77 IDGFKLLELV---GLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQH 133
Query: 150 VWRRQ 154
V RR+
Sbjct: 134 VVRRK 138
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+ VLLV+ D R +V +L+K +Y+VT G +A +L+ R +L+LT+V +P +
Sbjct: 9 VHVLLVDDDRVCRTLVAGMLKKCNYQVTTASSGEEAMALLE-RGTQFNLLLTDVMMPDVD 67
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
G LL V + + +PV+MMSS + TV C+ GA DYL+KPV + ++++W HVW
Sbjct: 68 GPTLLHYVRNNPFYQEMPVVMMSSNEHADTVMNCIRLGAEDYLLKPVTKKAVKHMWAHVW 127
Query: 152 RRQS--SMVSGNETQDESVGQQKIEATSENDAASNHSSGY 189
RR+ MV E E V ++ H G+
Sbjct: 128 RRKQRYQMVPQFENGHEVVEDDYAAGIGAHELEDGHHRGF 167
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+ VL+V+ + R + + +LRK YRVT G +A E+L+ R +L+LT+V +P I
Sbjct: 51 IHVLVVDDERICRAVTSQVLRKCGYRVTTCESGAEAIELLR-RGTEFNLLLTDVMMPDID 109
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
G LL V H +PVIMMS+ V++C+ GA DYL+KPV +++ LWQHVW
Sbjct: 110 GPKLLQHVRHHSQFSQLPVIMMSANQHSEIVFECVRSGADDYLLKPVTVKQVKLLWQHVW 169
Query: 152 RRQSS 156
R+Q S
Sbjct: 170 RKQYS 174
>gi|242064244|ref|XP_002453411.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
gi|241933242|gb|EES06387.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
Length = 631
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 5/156 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +++ LL+ Y VT A ++L+ + DL++++V +P
Sbjct: 26 VGMRVLAVDDDPTCLKLLEKLLQHCQYHVTTTGQAATALKLLREKKDQFDLVISDVHMPD 85
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ TV K + GA DYL+KPVR +LR +WQH
Sbjct: 86 MDGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRTIWQH 142
Query: 150 VWRRQS--SMVSGNETQDESVGQQKIEATSENDAAS 183
V RR+S + +GN+ D Q + A +N +
Sbjct: 143 VVRRRSCDAKNNGNDNDDSGKKLQVVSAEGDNGGGN 178
>gi|302805346|ref|XP_002984424.1| hypothetical protein SELMODRAFT_16707 [Selaginella moellendorffii]
gi|300147812|gb|EFJ14474.1| hypothetical protein SELMODRAFT_16707 [Selaginella moellendorffii]
Length = 73
Score = 101 bits (252), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/72 (58%), Positives = 59/72 (81%)
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
IDL+LT+V +P +SG LL+ +M H+ + +PV+MMSS DS + V+KC+ +GAAD+LVKP
Sbjct: 2 IDLVLTDVVMPGLSGLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFLVKP 61
Query: 138 VRRNELRNLWQH 149
VR+NEL+NLWQH
Sbjct: 62 VRKNELKNLWQH 73
>gi|162460462|ref|NP_001104863.1| response regulator 9 [Zea mays]
gi|14189890|dbj|BAB55874.1| response regulator 9 [Zea mays]
Length = 631
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 5/152 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +I+ LL + Y VT A ++L+ + DL++++V +P
Sbjct: 24 VGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVISDVHMPD 83
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ TV K + GA DYL+KPVR +LR +WQH
Sbjct: 84 MDGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRTIWQH 140
Query: 150 VWRRQS--SMVSGNETQDESVGQQKIEATSEN 179
V RR+S + SGN+ D Q + +N
Sbjct: 141 VVRRRSCDAKNSGNDNDDSGKKLQVVSVEGDN 172
>gi|115466774|ref|NP_001056986.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|55771374|dbj|BAD72541.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113595026|dbj|BAF18900.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|118790746|tpd|FAA00255.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215736874|dbj|BAG95803.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635081|gb|EEE65213.1| hypothetical protein OsJ_20357 [Oryza sativa Japonica Group]
Length = 696
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLR+ Y VT+ + A ++L+ DL++++V +P
Sbjct: 24 VGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPD 83
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S TV K + GA DYL+KPVR ELRN+WQH
Sbjct: 84 MDGFKLLELV---GLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQH 140
Query: 150 VWRRQ 154
V RR+
Sbjct: 141 VVRRK 145
>gi|218197710|gb|EEC80137.1| hypothetical protein OsI_21925 [Oryza sativa Indica Group]
Length = 696
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLR+ Y VT+ + A ++L+ DL++++V +P
Sbjct: 24 VGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPD 83
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S TV K + GA DYL+KPVR ELRN+WQH
Sbjct: 84 MDGFKLLELV---GLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQH 140
Query: 150 VWRRQ 154
V RR+
Sbjct: 141 VVRRK 145
>gi|242066838|ref|XP_002454708.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
gi|241934539|gb|EES07684.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
Length = 675
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLR+ YRVT + A +L+ DL++++V +P
Sbjct: 19 VGMRVLAVDDDPVCLKVLENLLRRCQYRVTTTNQAVVALRMLRQNRDLFDLVISDVHMPD 78
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S TV K + GA DYL+KPVR ELRN+WQH
Sbjct: 79 MDGFKLLELV---GLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRLEELRNIWQH 135
Query: 150 VWRRQSS 156
V RR+ S
Sbjct: 136 VVRRKFS 142
>gi|51968898|dbj|BAD43141.1| hypothetical protein [Arabidopsis thaliana]
Length = 664
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 14/193 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
LRVL+V+ D + I+ +L YRVT A +L+ D+++++V +P +
Sbjct: 28 LRVLVVDGDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
GF LL V + ++PVIMMS+ DS S V K + GA DYL+KPVR L+N+WQHV
Sbjct: 88 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVV 144
Query: 152 RRQS-----SMVSGNETQDESVG----QQKIEATSENDAASNHSSGYMACIQSKGEFIEK 202
R++ S SG +D QQ E N ++ N +G + + + E ++
Sbjct: 145 RKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQ 204
Query: 203 GSDEQ--SSCTKP 213
G D++ SS KP
Sbjct: 205 GDDKEDSSSLKKP 217
>gi|332015070|gb|AED99452.1| PRR9, partial [Capsella rubella]
Length = 91
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Query: 1 MGDVVL--NDEELKEMNGNEG----IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKS 54
MG++V+ +D+ ++ M N G + +WE +L + LRVLLVE+DDSTRQI+TALLRK
Sbjct: 1 MGEIVVLSSDDGMETMKNNRGKSSEVVQWEKYLPKTVLRVLLVESDDSTRQIITALLRKC 60
Query: 55 SYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
Y+V AV DGL AWE+LK + NIDL+LTE+
Sbjct: 61 CYKVVAVSDGLAAWEILKEKSHNIDLVLTEL 91
>gi|356507378|ref|XP_003522444.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 656
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + ++ LL++ Y VT +KA +L+ DL++++V +P
Sbjct: 16 VGMRVLAVDDDPTCLLVLKTLLQRCQYHVTTTNQAIKALALLREHKDKFDLVISDVHMPD 75
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 76 MDGFKLLELV---GLEMDLPVIMLSANGDTKMVMKGISHGACDYLLKPVRMEELKNIWQH 132
Query: 150 VWRRQ 154
V RR+
Sbjct: 133 VIRRK 137
>gi|343407540|gb|AEM23771.1| RRB1 type-b response regulator [Nicotiana tabacum]
Length = 654
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 86/150 (57%), Gaps = 8/150 (5%)
Query: 11 LKEMNGNEGIAKWE---TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKA 67
+ M+G+ K E TF + LRVL+V+ D +I+ +LRK Y VT A
Sbjct: 1 MASMSGDGATCKSEATDTF--PVGLRVLVVDDDIVCLRILEQMLRKCKYSVTTCTQATVA 58
Query: 68 WEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMM 127
+L+ R + D++L++V +P + GF LL LV + ++P+IMMS + V + +
Sbjct: 59 LNLLRERRGSFDVVLSDVHMPDMDGFKLLELV---GLEMDLPIIMMSGDGRTNLVMRGVQ 115
Query: 128 RGAADYLVKPVRRNELRNLWQHVWRRQSSM 157
GA DYL+KP+R EL+N+WQHV R++ S
Sbjct: 116 HGACDYLIKPIRDEELKNIWQHVVRKKCSF 145
>gi|162460014|ref|NP_001104861.1| response regulator 8 [Zea mays]
gi|13661174|dbj|BAB41137.1| response regulator 8 [Zea mays]
gi|195656391|gb|ACG47663.1| two-component response regulator ARR1 [Zea mays]
Length = 684
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 20/222 (9%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ ++VL+V+ D + ++ +L + Y VT P +A +L+ R D+I+++V +P
Sbjct: 13 VGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPD 72
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIMMS+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 73 MDGFRLLELV---GLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQH 129
Query: 150 VWRRQSSMVSGNETQDESVGQQKIE----ATSENDAASNHSSGYMACIQSKGEFIEKGSD 205
V R++ +GN+ + S + ++N+ AS+ + G +S+ + EK D
Sbjct: 130 VVRKK---FNGNKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQKKKREKEDD 186
Query: 206 EQSSCTKPDFEAESAHVEDMPDLSRQLWGKSL-QNDVKMQNH 246
E D E+ P R +W L Q V NH
Sbjct: 187 ET------DLESGDPSTSKKP---RVVWSVELHQQFVNAVNH 219
>gi|225446094|ref|XP_002270118.1| PREDICTED: uncharacterized protein LOC100266808 [Vitis vinifera]
Length = 643
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL V+ + +I+ LL + Y+VTA +A E+L+ N D+++T+V +P +
Sbjct: 147 GLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRENFDIVITDVKMPDM 206
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL ++ + +IPVIM S D STV K + GA DYL+KPVR E++N+WQHV
Sbjct: 207 DGFTLLKII---GLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNIWQHV 263
Query: 151 WRR 153
R+
Sbjct: 264 VRK 266
>gi|159485404|ref|XP_001700734.1| hypothetical protein CHLREDRAFT_113139 [Chlamydomonas reinhardtii]
gi|158281233|gb|EDP06988.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 235
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 74/120 (61%), Gaps = 3/120 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LR+L+V+ D ++V +LRK SY VT + A +L+ + DL+L++V +P +
Sbjct: 4 GLRLLVVDDDPLCLKVVEQMLRKCSYEVTVCSNATTALNILRDKNTEYDLVLSDVYMPDM 63
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL LV + ++PVIMMSS S V + + GA DYL+KPVR ELRNLWQHV
Sbjct: 64 DGFRLLELV---GLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLWQHV 120
>gi|147835104|emb|CAN70187.1| hypothetical protein VITISV_039080 [Vitis vinifera]
Length = 650
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL V+ + +I+ LL + Y+VTA +A E+L+ N D+++T+V +P +
Sbjct: 155 GLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRXNFDIVITDVKMPDM 214
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL ++ + +IPVIM S D STV K + GA DYL+KPVR E++N+WQHV
Sbjct: 215 DGFTLLKII---GLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNIWQHV 271
Query: 151 WRR 153
R+
Sbjct: 272 VRK 274
>gi|414865594|tpg|DAA44151.1| TPA: putative two-component response regulator family protein
isoform 1 [Zea mays]
gi|414865595|tpg|DAA44152.1| TPA: putative two-component response regulator family protein
isoform 2 [Zea mays]
gi|414865596|tpg|DAA44153.1| TPA: putative two-component response regulator family protein
isoform 3 [Zea mays]
Length = 684
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 20/222 (9%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ ++VL+V+ D + ++ +L + Y VT P +A +L+ R D+I+++V +P
Sbjct: 13 VGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPD 72
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIMMS+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 73 MDGFRLLELV---GLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQH 129
Query: 150 VWRRQSSMVSGNETQDESVGQQKIE----ATSENDAASNHSSGYMACIQSKGEFIEKGSD 205
V R++ +GN+ + S + ++N+ AS+ + G +S+ + EK D
Sbjct: 130 VVRKK---FNGNKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQKKKREKEDD 186
Query: 206 EQSSCTKPDFEAESAHVEDMPDLSRQLWGKSL-QNDVKMQNH 246
E D E+ P R +W L Q V NH
Sbjct: 187 ET------DLESGDPSTSKKP---RVVWSVELHQQFVNAVNH 219
>gi|302794410|ref|XP_002978969.1| type B response regulator [Selaginella moellendorffii]
gi|300153287|gb|EFJ19926.1| type B response regulator [Selaginella moellendorffii]
Length = 580
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 8/135 (5%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL V+ D + +I+ +LRK SY VT +A +L+ DL++++V +P +
Sbjct: 23 GLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISDVFMPDM 82
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIM SS V K ++ GA DYL+KPVR ELRN+WQHV
Sbjct: 83 DGFKLLEYV---GLEMDLPVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIWQHV 139
Query: 151 WRRQSSMVSGNETQD 165
R++ NE +D
Sbjct: 140 VRKKR-----NEARD 149
>gi|242092234|ref|XP_002436607.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
gi|241914830|gb|EER87974.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
Length = 659
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLR+ Y VT + A ++L+ DL++++V +P
Sbjct: 18 VGMRVLAVDDDPVCLKVLETLLRRCQYHVTTTNQAITALKMLRENRDTYDLVISDVHMPD 77
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S +V K + GA DYL+KPVR ELRN+WQH
Sbjct: 78 MDGFKLLELV---GLEMDLPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQH 134
Query: 150 VWRRQSS 156
V RR+ S
Sbjct: 135 VVRRKFS 141
>gi|449455539|ref|XP_004145510.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 688
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 82/142 (57%), Gaps = 8/142 (5%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
+RVL V+ D + I+ LLR+ Y VT + A ++L+ D+++++V +P +
Sbjct: 17 GMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDVHMPDM 76
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQHV
Sbjct: 77 DGFKLLELV---GLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 133
Query: 151 WRR-----QSSMVSGNETQDES 167
RR + M SGN+ + +S
Sbjct: 134 IRRKKFDPKDRMNSGNQDRPDS 155
>gi|356515054|ref|XP_003526216.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 696
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + ++ LLR+ Y T +KA +L+ DL++++V +P
Sbjct: 16 VGMRVLAVDDDPTCLLVLETLLRRCQYHATTTNQAIKALALLREHKDKFDLVISDVHMPD 75
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 76 MDGFKLLELV---GLEMDLPVIMLSANGDTKLVMKGISHGACDYLLKPVRMEELKNIWQH 132
Query: 150 VWRRQ 154
V RR+
Sbjct: 133 VIRRK 137
>gi|356569201|ref|XP_003552793.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 557
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L+K +Y VT A +L+ R D+++++V++P +
Sbjct: 16 GLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNMPDM 75
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS S V K + GA DYL+KP+R ELRN+WQHV
Sbjct: 76 DGFKLLEHV---GLEMDLPVIMMSVDGETSKVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 151 WRRQ 154
+R++
Sbjct: 133 FRKK 136
>gi|298103728|emb|CBM42565.1| putative B-type response regulator 14 [Populus x canadensis]
Length = 594
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 79/133 (59%), Gaps = 3/133 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L+K SY VT A +L+ R D+++++V +P +
Sbjct: 17 GLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKGGYDIVISDVYMPDM 76
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS S V K + GA DYL+KP+R ELRN+WQHV
Sbjct: 77 DGFKLLEQV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
Query: 151 WRRQSSMVSGNET 163
+R++ V ET
Sbjct: 134 FRKKIHEVRDIET 146
>gi|449485185|ref|XP_004157093.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Cucumis sativus]
Length = 688
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 82/142 (57%), Gaps = 8/142 (5%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
+RVL V+ D + I+ LLR+ Y VT + A ++L+ D+++++V +P +
Sbjct: 17 GMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDVHMPDM 76
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQHV
Sbjct: 77 DGFKLLELV---GLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 133
Query: 151 WRRQS-----SMVSGNETQDES 167
RR+ M SGN+ + +S
Sbjct: 134 IRRKKFDPKDRMNSGNQDRPDS 155
>gi|240255903|ref|NP_193346.4| two-component response regulator ARR2 [Arabidopsis thaliana]
gi|50400708|sp|Q9ZWJ9.1|ARR2_ARATH RecName: Full=Two-component response regulator ARR2; AltName:
Full=Receiver-like protein 5
gi|4210451|dbj|BAA74527.1| ARR2 protein [Arabidopsis thaliana]
gi|51969616|dbj|BAD43500.1| hypothetical protein [Arabidopsis thaliana]
gi|51970060|dbj|BAD43722.1| hypothetical protein [Arabidopsis thaliana]
gi|51971425|dbj|BAD44377.1| hypothetical protein [Arabidopsis thaliana]
gi|94958295|gb|ABF47278.1| ARR2 [Arabidopsis thaliana]
gi|94958297|gb|ABF47279.1| ARR2 [Arabidopsis thaliana]
gi|332658294|gb|AEE83694.1| two-component response regulator ARR2, partial [Arabidopsis
thaliana]
Length = 664
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 14/193 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
LRVL+V+ D + I+ +L YRVT A +L+ D+++++V +P +
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
GF LL V + ++PVIMMS+ DS S V K + GA DYL+KPVR L+N+WQHV
Sbjct: 88 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVV 144
Query: 152 RRQS-----SMVSGNETQDESVG----QQKIEATSENDAASNHSSGYMACIQSKGEFIEK 202
R++ S SG +D QQ E N ++ N +G + + + E ++
Sbjct: 145 RKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQ 204
Query: 203 GSDEQ--SSCTKP 213
G D++ SS KP
Sbjct: 205 GDDKEDSSSLKKP 217
>gi|449450407|ref|XP_004142954.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
gi|449494494|ref|XP_004159561.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
Length = 583
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ LRVL+V+ D + +I+ +L+K SY VT +A +L+ R D+++++V++P
Sbjct: 15 IGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALSLLRERKDGYDIVISDVNMPD 74
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL V + ++PVIMMS S V K + GA DYL+KP+R ELRN+WQH
Sbjct: 75 MDGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 131
Query: 150 VWRRQ 154
V R++
Sbjct: 132 VLRKK 136
>gi|225456769|ref|XP_002274673.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
Length = 570
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L+K SY VT A +L+ R D+++++V++P +
Sbjct: 16 GLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRERKDGFDIVISDVNMPDM 75
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS S V K + GA DYL+KPVR EL+N+WQHV
Sbjct: 76 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELKNIWQHV 132
Query: 151 WRRQ 154
+R++
Sbjct: 133 FRKK 136
>gi|326500594|dbj|BAJ94963.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +++ LLR+ Y VT A +L+ DL++++V +P
Sbjct: 20 VGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPD 79
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ TV K + GA DYL+KPVR +L+ +WQH
Sbjct: 80 MDGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQH 136
Query: 150 VWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSS 209
V RR + G++ D S Q+ A EN A+ + QS+ + E G D S
Sbjct: 137 VIRRNTKN-RGSDNDDAS--QKGPNAEGENGGANRNKR------QSRRDRDENGDDGDDS 187
>gi|297733626|emb|CBI14873.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 78/125 (62%), Gaps = 5/125 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L+K SY VT A +L+ R D+++++V++P +
Sbjct: 16 GLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRERKDGFDIVISDVNMPDM 75
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS S V K + GA DYL+KPVR EL+N+WQH
Sbjct: 76 DGFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELKNIWQH 131
Query: 150 VWRRQ 154
V+R++
Sbjct: 132 VFRKK 136
>gi|115449219|ref|NP_001048389.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|47497030|dbj|BAD19083.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|47497239|dbj|BAD19284.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113537920|dbj|BAF10303.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|118790756|tpd|FAA00256.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215704573|dbj|BAG94206.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767879|dbj|BAH00108.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623845|gb|EEE57977.1| hypothetical protein OsJ_08721 [Oryza sativa Japonica Group]
Length = 688
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LL + Y VT A ++L+ DL++++V +P
Sbjct: 22 VGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDVHMPD 81
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S TV K + GA DYL+KPVR ELRN+WQH
Sbjct: 82 MDGFKLLELV---GLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQH 138
Query: 150 VWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMAC 192
V RR+ S T+D + E +A S+H G++ C
Sbjct: 139 VIRRKFS------TRDRANLDFYEECNKPPNADSDHVHGHVTC 175
>gi|218191747|gb|EEC74174.1| hypothetical protein OsI_09283 [Oryza sativa Indica Group]
Length = 688
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LL + Y VT A ++L+ DL++++V +P
Sbjct: 22 VGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDVHMPD 81
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S TV K + GA DYL+KPVR ELRN+WQH
Sbjct: 82 MDGFKLLELV---GLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQH 138
Query: 150 VWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMAC 192
V RR+ S T+D + E +A S+H G++ C
Sbjct: 139 VIRRKFS------TRDRANLDFYEECNKPPNADSDHVHGHVTC 175
>gi|357480193|ref|XP_003610382.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355511437|gb|AES92579.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 633
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 88/153 (57%), Gaps = 14/153 (9%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D ++ +++ L Y VT ++A E+L+ + DLI+++V++P
Sbjct: 19 VGMRVLAVDDDQTSLKVLEKHLLTCKYNVTTTTKSVEALELLREKRSMFDLIISDVNMPE 78
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL V + ++P IM+S D V K +M+GA DYLVKP+R EL+N+WQH
Sbjct: 79 MDGFKLLEQV---GLEMDLPFIMLSGHDDRERVMKGVMKGACDYLVKPIRLEELKNIWQH 135
Query: 150 VWRRQ-----------SSMVSGNETQDESVGQQ 171
V R++ S VSG +T E++ ++
Sbjct: 136 VVRKKIESKDQNQGIISDGVSGQDTSSENIPKK 168
>gi|388504468|gb|AFK40300.1| unknown [Medicago truncatula]
Length = 570
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L+K +Y VT A +L+ R D+++++V++P +
Sbjct: 16 GLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNMPDM 75
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS S V K + GA DYL+KP+R ELRN+WQHV
Sbjct: 76 DGFKLLGHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 151 WRRQ 154
+R++
Sbjct: 133 FRKR 136
>gi|357466055|ref|XP_003603312.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355492360|gb|AES73563.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 645
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 75/127 (59%), Gaps = 3/127 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + ++ LLR+ Y VT + A +L+ DL++++V +P
Sbjct: 10 IGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLVISDVHMPD 69
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 70 MDGFKLLELV---GLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNIWQH 126
Query: 150 VWRRQSS 156
V R++ S
Sbjct: 127 VIRKKKS 133
>gi|302768857|ref|XP_002967848.1| type B response regulator [Selaginella moellendorffii]
gi|300164586|gb|EFJ31195.1| type B response regulator [Selaginella moellendorffii]
Length = 414
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
L+VL+V+ D ++ +LR+ Y VT A +L+ R + D+++++V +P +
Sbjct: 8 GLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVISDVHMPDM 67
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL L+ + IPVIMMS+ V K ++ GA DYLVKPVR ELRN+WQHV
Sbjct: 68 DGFKLLELI---GLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNIWQHV 124
Query: 151 WRRQS 155
RR++
Sbjct: 125 VRRRT 129
>gi|125598040|gb|EAZ37820.1| hypothetical protein OsJ_22159 [Oryza sativa Japonica Group]
Length = 713
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL V+ ++ ALLR+ Y+ T D A +L+ RP + DL++++V + +
Sbjct: 15 GLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDM 74
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL L+ + ++PVIM S+ + T+ K + GA DYLVKPV +++N+WQHV
Sbjct: 75 DGFKLLELI---GLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHV 131
Query: 151 WRRQ 154
WR++
Sbjct: 132 WRKR 135
>gi|302799824|ref|XP_002981670.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
gi|300150502|gb|EFJ17152.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
Length = 413
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
L+VL+V+ D ++ +LR+ Y VT A +L+ R + D+++++V +P +
Sbjct: 8 GLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVISDVHMPDM 67
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL L+ + IPVIMMS+ V K ++ GA DYLVKPVR ELRN+WQHV
Sbjct: 68 DGFKLLELI---GLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNIWQHV 124
Query: 151 WRRQS 155
RR++
Sbjct: 125 VRRRT 129
>gi|357463135|ref|XP_003601849.1| Response regulator [Medicago truncatula]
gi|355490897|gb|AES72100.1| Response regulator [Medicago truncatula]
Length = 570
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L+K +Y VT A +L+ R D+++++V++P +
Sbjct: 16 GLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNMPDM 75
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS S V K + GA DYL+KP+R ELRN+WQHV
Sbjct: 76 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 151 WRRQ 154
+R++
Sbjct: 133 FRKR 136
>gi|326515596|dbj|BAK07044.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLR+ Y VTA + A +L+ DL++++V +P
Sbjct: 22 VGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAIIALRMLRENRDMFDLVISDVHMPD 81
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S TV K + GA DYL+KPVR EL+N+WQH
Sbjct: 82 MDGFKLLELV---GLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELKNIWQH 138
Query: 150 VWRRQSS 156
V RR+ S
Sbjct: 139 VVRRKFS 145
>gi|302824731|ref|XP_002994006.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
gi|300138168|gb|EFJ04946.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
Length = 376
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 8/135 (5%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL V+ D + +I+ +LRK SY VT +A +L+ DL++++V +P +
Sbjct: 13 GLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISDVFMPDM 72
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIM SS V K ++ GA DYL+KPVR ELRN+WQHV
Sbjct: 73 DGFKLLEYV---GLEMDLPVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIWQHV 129
Query: 151 WRRQSSMVSGNETQD 165
R++ NE +D
Sbjct: 130 VRKKR-----NEARD 139
>gi|15236580|ref|NP_194920.1| two-component response regulator ARR10 [Arabidopsis thaliana]
gi|38257358|sp|O49397.1|ARR10_ARATH RecName: Full=Two-component response regulator ARR10; AltName:
Full=Receiver-like protein 4
gi|2827643|emb|CAA16597.1| predicted protein [Arabidopsis thaliana]
gi|3549641|emb|CAA06432.1| receiver-like protein 4 [Arabidopsis thaliana]
gi|7270096|emb|CAB79910.1| predicted protein [Arabidopsis thaliana]
gi|27808620|gb|AAO24590.1| At4g31920 [Arabidopsis thaliana]
gi|110736270|dbj|BAF00105.1| predicted protein [Arabidopsis thaliana]
gi|332660579|gb|AEE85979.1| two-component response regulator ARR10 [Arabidopsis thaliana]
Length = 552
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +I+ LL++ Y VT A E+L+ DL++++VD+P
Sbjct: 15 VGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPD 74
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 75 MDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQH 131
Query: 150 VWR 152
V R
Sbjct: 132 VVR 134
>gi|125556273|gb|EAZ01879.1| hypothetical protein OsI_23901 [Oryza sativa Indica Group]
Length = 684
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL V+ ++ ALLR+ Y+ T D A +L+ RP + DL++++V + +
Sbjct: 15 GLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDM 74
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL L+ + ++PVIM S+ + T+ K + GA DYLVKPV +++N+WQHV
Sbjct: 75 DGFKLLELI---GLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHV 131
Query: 151 WRRQ 154
WR++
Sbjct: 132 WRKR 135
>gi|357138369|ref|XP_003570765.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 615
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +++ +LL + Y VT A +L+ DL++++V +P
Sbjct: 19 VGMRVLAVDDDPTCLKVLESLLLRCDYHVTTTGQAATALRMLRENKDRFDLVISDVHMPD 78
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ TV K + GA DYL+KPVR +L+ +WQH
Sbjct: 79 MDGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQH 135
Query: 150 VWRRQSSMVSGNETQDESVGQQKIEATSENDAAS 183
V RR + GN+ D GQ+ EN A+
Sbjct: 136 VVRRNTK-TRGNDNDD--AGQKVQNGDGENGGAN 166
>gi|118790775|tpd|FAA00258.1| TPA: response regulator [Oryza sativa Japonica Group]
Length = 690
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL V+ ++ ALLR+ Y+ T D A +L+ RP + DL++++V + +
Sbjct: 15 GLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDM 74
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL L+ + ++PVIM S+ + T+ K + GA DYLVKPV +++N+WQHV
Sbjct: 75 DGFKLLELI---GLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHV 131
Query: 151 WRRQ 154
WR++
Sbjct: 132 WRKR 135
>gi|51535423|dbj|BAD37322.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|51535645|dbj|BAD37619.1| putative response regulator 9 [Oryza sativa Japonica Group]
Length = 694
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL V+ ++ ALLR+ Y+ T D A +L+ RP + DL++++V + +
Sbjct: 15 GLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDM 74
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL L+ + ++PVIM S+ + T+ K + GA DYLVKPV +++N+WQHV
Sbjct: 75 DGFKLLELI---GLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHV 131
Query: 151 WRRQ 154
WR++
Sbjct: 132 WRKR 135
>gi|297798770|ref|XP_002867269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313105|gb|EFH43528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +I+ LL + Y VT A E+L+ DL++++VD+P
Sbjct: 15 VGMRVLAVDDDQTCLRILQTLLHRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPD 74
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 75 MDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQH 131
Query: 150 VWR 152
V R
Sbjct: 132 VVR 134
>gi|125538347|gb|EAY84742.1| hypothetical protein OsI_06112 [Oryza sativa Indica Group]
Length = 626
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +I+ LL + Y VT A ++L+ DL++++V +P
Sbjct: 27 VGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDVHMPD 86
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ TV K + GA DYL+KPVR +LR +WQH
Sbjct: 87 MDGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQH 143
Query: 150 VWRRQSSMVSGNETQDESVGQQ 171
V RR++ N D+ GQ+
Sbjct: 144 VIRRKNCDAK-NRGNDDDAGQK 164
>gi|357113330|ref|XP_003558456.1| PREDICTED: uncharacterized protein LOC100821963 [Brachypodium
distachyon]
Length = 677
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ ++VL+V+ D + ++ +L + Y T +A +L+ R D+I+++V +P
Sbjct: 14 VGMKVLVVDDDPTCLAVLKQMLVQCRYDATTCSQSTRALSMLRENRRGFDVIISDVHMPD 73
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIMMS+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 74 MDGFRLLELV---GLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQH 130
Query: 150 VWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSS 209
V R++ SGN+ + S ++ T N A+N + Y + I + K ++
Sbjct: 131 VVRKK---FSGNKEHEHS---GSLDDTDRNRPANNDNE-YASSINDGADDSWKSQKKKRD 183
Query: 210 CTKPDFEAESAHVEDMPDLSRQLWGKSL-QNDVKMQNH 246
+ D E ES + R +W L Q V NH
Sbjct: 184 KEEDDSELESGDPSNSSKKPRVVWSVELHQQFVNAVNH 221
>gi|297606271|ref|NP_001058204.2| Os06g0647200 [Oryza sativa Japonica Group]
gi|255677276|dbj|BAF20118.2| Os06g0647200 [Oryza sativa Japonica Group]
Length = 663
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL V+ ++ ALLR+ Y+ T D A +L+ RP + DL++++V + +
Sbjct: 30 GLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDM 89
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL L+ + ++PVIM S+ + T+ K + GA DYLVKPV +++N+WQHV
Sbjct: 90 DGFKLLELI---GLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHV 146
Query: 151 WRRQ 154
WR++
Sbjct: 147 WRKR 150
>gi|94449082|gb|ABF19058.1| ARR2 [Arabidopsis thaliana]
gi|94449084|gb|ABF19059.1| ARR2 [Arabidopsis thaliana]
Length = 664
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 14/193 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
LRVL+V+ D + I+ +L YRVT A +L+ D+++++V +P +
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
GF LL V + ++PVIMMS+ DS S V K + GA DYL+KPVR L+N+WQHV
Sbjct: 88 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVV 144
Query: 152 RRQS-----SMVSGNETQDESVG----QQKIEATSENDAASNHSSGYMACIQSKGEFIEK 202
R++ S SG +D QQ E N ++ N +G + + + E ++
Sbjct: 145 RKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQ 204
Query: 203 GSDEQ--SSCTKP 213
G D++ SS KP
Sbjct: 205 GDDKEDSSSLKKP 217
>gi|115444635|ref|NP_001046097.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|49388028|dbj|BAD25144.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113535628|dbj|BAF08011.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|118790764|tpd|FAA00257.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215713506|dbj|BAG94643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622313|gb|EEE56445.1| hypothetical protein OsJ_05635 [Oryza sativa Japonica Group]
Length = 626
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +I+ LL + Y VT A ++L+ DL++++V +P
Sbjct: 27 VGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDVHMPD 86
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ TV K + GA DYL+KPVR +LR +WQH
Sbjct: 87 MDGFKLLELV---GLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQH 143
Query: 150 VWRRQSSMVSGNETQDESVGQQ 171
V RR++ N D+ GQ+
Sbjct: 144 VIRRKNCDAK-NRGNDDDAGQK 164
>gi|255548782|ref|XP_002515447.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223545391|gb|EEF46896.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 663
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + ++ LR+ Y VT + A ++L+ DL++++V +P
Sbjct: 16 IGMRVLAVDDDPTCLLVLETFLRRCQYHVTTTSQAISALKMLRENKNKFDLVISDVHMPD 75
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 76 MDGFKLLELV---GLEMDLPVIMLSAYSDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 132
Query: 150 VWRRQ 154
V RR+
Sbjct: 133 VIRRK 137
>gi|224099559|ref|XP_002311532.1| type-b response regulator [Populus trichocarpa]
gi|222851352|gb|EEE88899.1| type-b response regulator [Populus trichocarpa]
Length = 303
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +++ +LR+ Y VT A ++L+ R D++L++V +P +
Sbjct: 8 GLRVLVVDDDITCLRLLEKMLRRCLYHVTTCSQATAALKLLRERKGCFDVVLSDVHMPDM 67
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL LV + ++PVIMMS+ S V + + GA DYL+KP+R EL+N+WQHV
Sbjct: 68 DGFKLLELV---GLEMDLPVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNIWQHV 124
Query: 151 WRRQ 154
R++
Sbjct: 125 IRKK 128
>gi|255636387|gb|ACU18532.1| unknown [Glycine max]
Length = 220
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLRK Y VT ++A +L+ DL++++V++P
Sbjct: 17 VGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDLVISDVNMPD 76
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
I GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 77 IDGFKLLELV---GLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQH 133
Query: 150 VWRRQS 155
V RR++
Sbjct: 134 VVRRKN 139
>gi|312283507|dbj|BAJ34619.1| unnamed protein product [Thellungiella halophila]
Length = 539
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +I+ LL + Y VT A ++L+ DL++++VD+P
Sbjct: 12 VGMRVLAVDDDQTCLRILETLLHRCQYHVTTTDQAQTALKLLRENKNKFDLVISDVDMPD 71
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 72 MDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQH 128
Query: 150 VWRR 153
V R+
Sbjct: 129 VVRK 132
>gi|356510875|ref|XP_003524159.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 584
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L+K Y VT +A + L+ R D+++++V++P +
Sbjct: 17 GLRVLVVDDDPTWLRILEKMLKKCLYEVTTCCLATEALKKLRERKDAYDIVISDVNMPDM 76
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS S V K + GA DYL+KP+R ELRN+WQHV
Sbjct: 77 DGFKLLEQV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 133
Query: 151 WRRQ 154
+R++
Sbjct: 134 FRKR 137
>gi|242041701|ref|XP_002468245.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
gi|241922099|gb|EER95243.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
Length = 686
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ ++VL+V+ D + ++ +L Y VT P +A +L+ R D+I+++V +P
Sbjct: 13 VGMKVLVVDDDPTCLLVLKRMLLDCRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPD 72
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIMMS+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 73 MDGFRLLELV---GLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQH 129
Query: 150 VWRRQ 154
V R++
Sbjct: 130 VVRKK 134
>gi|302770951|ref|XP_002968894.1| type B response regulator [Selaginella moellendorffii]
gi|300163399|gb|EFJ30010.1| type B response regulator [Selaginella moellendorffii]
Length = 602
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +L + +Y VT A +L+ D++L++V +P +
Sbjct: 17 GLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKERFDVVLSDVCMPDM 76
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL LV + ++PVIMMS+ S V K ++ GA DYL+KP+R EL+N+WQHV
Sbjct: 77 DGFKLLELV---GLEMDLPVIMMSANGETSLVMKGIIHGACDYLLKPIRIKELKNIWQHV 133
Query: 151 WRRQSSMVSGNETQDESVGQQK 172
+RR+ +++ + D ++K
Sbjct: 134 FRRKRNILKDADGADHDRQKRK 155
>gi|302784610|ref|XP_002974077.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
gi|300158409|gb|EFJ25032.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
Length = 607
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +L + +Y VT A +L+ D++L++V +P +
Sbjct: 17 GLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKERFDVVLSDVCMPDM 76
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL LV + ++PVIMMS+ S V K ++ GA DYL+KP+R EL+N+WQHV
Sbjct: 77 DGFKLLELV---GLEMDLPVIMMSANGETSLVMKGIIHGACDYLLKPIRIKELKNIWQHV 133
Query: 151 WRRQSSMVSGNETQDESVGQQK 172
+RR+ +++ + D ++K
Sbjct: 134 FRRKRNILKDADGADHDRQKRK 155
>gi|298103724|emb|CBM42563.1| putative B-type response regulator 21 [Populus x canadensis]
Length = 563
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 98/183 (53%), Gaps = 15/183 (8%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L++ SY VT A +L+ R D+++++V +P +
Sbjct: 16 GLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDVFMPDM 75
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS S V K + GA DYL+KP+R ELRN+WQH
Sbjct: 76 DGFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 131
Query: 150 VWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMAC-----IQSKGEFIEKGS 204
V+R++ V E + G + + T + + + G+ C + K + IE
Sbjct: 132 VFRKKIHEVRDIEILE---GIESFQMT--RNGSDQYEDGHFLCGEDLTLIKKRKDIESKH 186
Query: 205 DEQ 207
DE+
Sbjct: 187 DEK 189
>gi|297735376|emb|CBI17816.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL V+ + +I+ LL + Y+VTA +A E+L+ N D+++T+V +P +
Sbjct: 18 GLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRENFDIVITDVKMPDM 77
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL ++ + +IPVIM S D STV K + GA DYL+KPVR E++N+WQHV
Sbjct: 78 DGFTLLKII---GLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNIWQHV 134
Query: 151 WRR 153
R+
Sbjct: 135 VRK 137
>gi|413939317|gb|AFW73868.1| putative two-component response regulator family protein [Zea mays]
Length = 676
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 3/127 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLR+ Y VT + A +L+ DL++++V +P
Sbjct: 19 VGMRVLAVDDDPVCLKVLENLLRRCQYHVTTTNQAVVALSMLRQNRDLFDLVISDVHMPD 78
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S TV K + GA DYL+KPVR ELRN+WQH
Sbjct: 79 MDGFKLLELV---GLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRLEELRNIWQH 135
Query: 150 VWRRQSS 156
V RR+ S
Sbjct: 136 VVRRKFS 142
>gi|356538109|ref|XP_003537547.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 585
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L+K +Y VT A +L+ R D+++++V++P +
Sbjct: 16 GLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNMPDM 75
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS S V K + GA DYL+KP+R ELRN+WQHV
Sbjct: 76 DGFKLLEHV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 151 WRRQ 154
R++
Sbjct: 133 LRKR 136
>gi|297804596|ref|XP_002870182.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
gi|297316018|gb|EFH46441.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
Length = 676
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 14/193 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
LRVL+V+ D + I+ +L YRVT A +L+ D+++++V +P +
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
GF LL V + ++PVIMMS+ DS S V K + GA DYL+KPVR L+N+WQHV
Sbjct: 88 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVV 144
Query: 152 RRQS-----SMVSGNETQDESVG---QQKIEATSENDAASNHSSGYMACIQSKGEFI-EK 202
R++ S SG +D QQ+ ++N+++S + + + + K E + E+
Sbjct: 145 RKKRNDWNVSEHSGGSIEDTGGDRDRQQQQREDADNNSSSINEGNWRSSRKRKEEEVDEQ 204
Query: 203 GSDEQ--SSCTKP 213
G D++ SS KP
Sbjct: 205 GDDKEDTSSLKKP 217
>gi|413952914|gb|AFW85563.1| putative two-component response regulator family protein [Zea mays]
Length = 669
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 3/127 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLR+ Y V + A ++L+ DL++++V +P
Sbjct: 26 VGMRVLAVDDDPVCLKVLETLLRRCQYHVITTNQAITALKLLRENRDMFDLVISDVHMPD 85
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S +V K + GA DYL+KPVR ELRN+WQH
Sbjct: 86 MDGFKLLELV---GLEMDLPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQH 142
Query: 150 VWRRQSS 156
V RR+ S
Sbjct: 143 VVRRKFS 149
>gi|255584969|ref|XP_002533196.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223526994|gb|EEF29188.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 669
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +LR+ Y VT A +L+ R D++L++V +P +
Sbjct: 42 GLRVLVVDDDTTCLRILEQMLRRCLYHVTTCSQAKVALNLLRERKGCFDVVLSDVHMPDM 101
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS+ S V + + GA DYL+KP+R EL+N+WQH
Sbjct: 102 DGFKLL----EHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQH 157
Query: 150 VWRRQ 154
V R++
Sbjct: 158 VVRKK 162
>gi|298103718|emb|CBM42560.1| putative B-type response regulator 15 [Populus x canadensis]
Length = 671
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 76/124 (61%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +++ + R+ Y VT A ++L+ R D++L++V +P +
Sbjct: 37 GLRVLVVDDDITCLRLLEKMPRRCLYHVTTCSQATAALKLLRERKGCFDVVLSDVHMPDM 96
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL LV + ++PVIMMS+ S V + + GA DYL+KP+R EL+N+WQHV
Sbjct: 97 DGFKLLELV---GLEMDLPVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNIWQHV 153
Query: 151 WRRQ 154
R++
Sbjct: 154 IRKK 157
>gi|109631194|gb|ABG35773.1| SRR391 [Striga asiatica]
Length = 541
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D +++ LLRK Y V+ A ++L+ DL++++V +P
Sbjct: 18 VGMRVLAVDDDPICLKLLDTLLRKCQYHVSTTSQARMALKMLRENKDRFDLVISDVHMPD 77
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL V + ++PVIM+S+ V K + GA DYLVKPVR ELRN+WQH
Sbjct: 78 MDGFKLLDQV---GLEMDLPVIMLSANSDPKLVMKGVTHGACDYLVKPVRIEELRNIWQH 134
Query: 150 VWRRQSSMVSGNETQ 164
V RR+ S V+ NE +
Sbjct: 135 VIRRRKS-VTRNENK 148
>gi|125552240|gb|EAY97949.1| hypothetical protein OsI_19867 [Oryza sativa Indica Group]
Length = 315
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 82/144 (56%), Gaps = 10/144 (6%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVLL++ + +I+T LL Y+VT A E L P + D++LTEV P+
Sbjct: 23 VGMRVLLIDESTTYLKIITKLLLNCGYKVTPKTAARDAVEELHENPWSYDMVLTEVHAPA 82
Query: 90 -ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
I GF LL ++PV++ S+ D TV KC+ GA DYLVKP+R EL+N+WQ
Sbjct: 83 GIDGFNLLQYAGTD---MDLPVVVFSADDDKRTVLKCVNSGACDYLVKPLRHEELKNIWQ 139
Query: 149 HVWRR------QSSMVSGNETQDE 166
HV+RR + + +GN ++ E
Sbjct: 140 HVYRRNLRSGGRRAAAAGNSSKGE 163
>gi|223942343|gb|ACN25255.1| unknown [Zea mays]
gi|323388571|gb|ADX60090.1| ARR-B family member [Zea mays]
gi|323388695|gb|ADX60152.1| ARR-B transcription factor [Zea mays]
gi|413956503|gb|AFW89152.1| putative two-component response regulator family protein isoform 1
[Zea mays]
gi|413956504|gb|AFW89153.1| putative two-component response regulator family protein isoform 2
[Zea mays]
Length = 686
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ ++VL+V+ D + ++ +L + Y VT P +A +L+ R D+I+++V +P
Sbjct: 13 VGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPD 72
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIMMS+ V + GA DYL+KPVR EL+N+WQH
Sbjct: 73 MDGFRLLELV---GLEMDLPVIMMSADSRTDIVMNGIKHGACDYLIKPVRMEELKNIWQH 129
Query: 150 VWRRQ 154
V R++
Sbjct: 130 VIRKK 134
>gi|312282885|dbj|BAJ34308.1| unnamed protein product [Thellungiella halophila]
Length = 380
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D S +I+ +L + Y+VT A +L+ R DL+L++V +P +
Sbjct: 10 GLRVLVVDDDTSCLRILEQMLLRLMYQVTICSQADVALNILRERKGCFDLVLSDVHMPGM 69
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+G+ LL V + ++PVIMMS +TV K + GA DYL+KP+R EL+N+WQHV
Sbjct: 70 NGYKLLQQV---GLEMDLPVIMMSVDGRTTTVMKGINHGACDYLIKPIRPEELKNIWQHV 126
Query: 151 WRRQSSM 157
RR+ +M
Sbjct: 127 VRRKWTM 133
>gi|15810171|gb|AAL06987.1| AT3g16857/MUH15_1 [Arabidopsis thaliana]
Length = 690
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D+++++V +P +
Sbjct: 36 GLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDM 95
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS+ DS S V K + GA DYL+KPVR L+N+WQHV
Sbjct: 96 DGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152
Query: 151 WRRQSS 156
R++ S
Sbjct: 153 VRKRRS 158
>gi|168002194|ref|XP_001753799.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695206|gb|EDQ81551.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 311
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ + T ++ +L SYRVT A +L+ DL++++V++P +
Sbjct: 49 GLRVLVVDDEPVTLMVLEKMLTNCSYRVTTCGRATDALCLLREDIDKFDLVISDVNMPDM 108
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL LV + ++PVIMMS S V K + GA DYL+KPVR+ ELRN+WQHV
Sbjct: 109 DGFKLLELV---GLEMDLPVIMMSGNGETSAVMKGITHGACDYLLKPVRQKELRNIWQHV 165
Query: 151 WRRQ 154
R++
Sbjct: 166 VRKR 169
>gi|168004846|ref|XP_001755122.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693715|gb|EDQ80066.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 97/179 (54%), Gaps = 12/179 (6%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL+V+ + + I+ +L + +YRVT +A +L+ D+++++VD+P
Sbjct: 52 VGMRVLVVDDNPTCLMILEQMLVRCAYRVTTCGKATEALSMLREDIGKFDVVISDVDMPD 111
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S S V K + GA DYL+KPVR ELRN+WQH
Sbjct: 112 MDGFKLLELV---GLEMDLPVIMVSGNGETSAVMKGITHGACDYLLKPVRIEELRNIWQH 168
Query: 150 VWRRQSSMVSGNETQ--DESVGQQKIEATSENDAASNHSSG-------YMACIQSKGEF 199
V R++ V T+ +E+ G ++ + D A SS + + KGEF
Sbjct: 169 VVRKKRREVKAVATKSVEEAGGCERPKRGGGADDADYTSSATDTTDSNWKLTKRRKGEF 227
>gi|42564262|ref|NP_566561.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|50400604|sp|Q940D0.2|ARR1_ARATH RecName: Full=Two-component response regulator ARR1
gi|11994744|dbj|BAB03073.1| ARR1 protein [Arabidopsis thaliana]
gi|51971120|dbj|BAD44252.1| putative ARR1 protein [Arabidopsis thaliana]
gi|332642355|gb|AEE75876.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 690
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D+++++V +P +
Sbjct: 36 GLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDM 95
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS+ DS S V K + GA DYL+KPVR L+N+WQHV
Sbjct: 96 DGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152
Query: 151 WRRQSS 156
R++ S
Sbjct: 153 VRKRRS 158
>gi|162460694|ref|NP_001104864.1| response regulator 10 [Zea mays]
gi|15667625|dbj|BAB68269.1| response regulator 10 [Zea mays]
Length = 686
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ ++VL+V+ D + ++ +L + Y VT P +A +L+ R D+I+++V +P
Sbjct: 13 VGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPD 72
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIMMS+ V + GA DYL+KPVR EL+N+WQH
Sbjct: 73 MDGFRLLELV---GLEMDLPVIMMSADSRTDIVMNGVKHGACDYLIKPVRMEELKNIWQH 129
Query: 150 VWRRQ 154
V R++
Sbjct: 130 VIRKK 134
>gi|42570473|ref|NP_850600.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|222423228|dbj|BAH19591.1| AT3G16857 [Arabidopsis thaliana]
gi|332642354|gb|AEE75875.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 669
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D+++++V +P +
Sbjct: 36 GLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDM 95
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS+ DS S V K + GA DYL+KPVR L+N+WQHV
Sbjct: 96 DGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152
Query: 151 WRRQSS 156
R++ S
Sbjct: 153 VRKRRS 158
>gi|297830298|ref|XP_002883031.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
gi|297328871|gb|EFH59290.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
Length = 687
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D+++++V +P +
Sbjct: 34 GLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDM 93
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS+ DS S V K + GA DYL+KPVR L+N+WQHV
Sbjct: 94 DGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 150
Query: 151 WRRQSS 156
R++ S
Sbjct: 151 VRKRRS 156
>gi|4210449|dbj|BAA74528.1| ARR1 protein [Arabidopsis thaliana]
Length = 669
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D+++++V +P +
Sbjct: 36 GLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDM 95
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS+ DS S V K + GA DYL+KPVR L+N+WQHV
Sbjct: 96 DGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152
Query: 151 WRRQSS 156
R++ S
Sbjct: 153 VRKRRS 158
>gi|312283277|dbj|BAJ34504.1| unnamed protein product [Thellungiella halophila]
Length = 668
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D+++++V +P +
Sbjct: 34 GLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDM 93
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS+ DS S V K + GA DYL+KPVR L+N+WQH
Sbjct: 94 DGFKLL----EHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQH 149
Query: 150 VWRRQSS 156
V R++ S
Sbjct: 150 VVRKRRS 156
>gi|443302655|gb|AGC82269.1| cAMP phosphodiesterase [Acanthamoeba castellanii]
Length = 621
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSY-RVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
+++L+V+ + + R +V LL K+ Y V V G KA E+++ R N L+L ++ +P I
Sbjct: 12 IKILVVDDEPTARIVVRKLLEKTGYTEVEVVESGRKAIELIENRSFN--LVLCDLHMPDI 69
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
G ++ V + + P++MMS+ + ++ VYKC+ GA DYL+KP++ N ++NLWQ+V
Sbjct: 70 DGIGVVKAVRKKAHMDDSPIVMMSATEDLNIVYKCLSEGADDYLLKPIQANAVKNLWQNV 129
Query: 151 WRRQSSMVSGN 161
WR++ + N
Sbjct: 130 WRKRKEKETAN 140
>gi|298103720|emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis]
Length = 663
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 76/124 (61%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +++ +L + Y VT A ++L+ R D++L++V +P +
Sbjct: 37 GLRVLVVDDDITCLRLLEKMLCRCLYNVTTCSQATAALKLLRERKGCFDVVLSDVHMPDM 96
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL LV + ++PVIMMS+ S V + + GA DYL+KP+R EL+N+WQHV
Sbjct: 97 DGFKLLELV---GLEMDLPVIMMSADGRTSAVMRGIKHGACDYLIKPIREEELKNIWQHV 153
Query: 151 WRRQ 154
R++
Sbjct: 154 IRKK 157
>gi|224111430|ref|XP_002315852.1| type-b response regulator [Populus trichocarpa]
gi|222864892|gb|EEF02023.1| type-b response regulator [Populus trichocarpa]
Length = 663
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 76/124 (61%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +++ +L + Y VT A ++L+ R D++L++V +P +
Sbjct: 37 GLRVLVVDDDITCLRLLEKMLCRCLYNVTTCSQATAALKLLRERKGCFDVVLSDVHMPDM 96
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL LV + ++PVIMMS+ S V + + GA DYL+KP+R EL+N+WQHV
Sbjct: 97 DGFKLLELV---GLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHV 153
Query: 151 WRRQ 154
R++
Sbjct: 154 IRKK 157
>gi|159475341|ref|XP_001695777.1| hypothetical protein CHLREDRAFT_174408 [Chlamydomonas reinhardtii]
gi|158275337|gb|EDP01114.1| predicted protein [Chlamydomonas reinhardtii]
Length = 2212
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 80/133 (60%), Gaps = 6/133 (4%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVP---DGL-KAWEVLKGRPRNIDLILTEVDL 87
LR+L+V++ +RQ T LLR+ +Y+VTAV +GL K E G N DL+L E +
Sbjct: 1503 LRILVVDSKAVSRQTTTQLLRECAYQVTAVKTAREGLQKLIEAEHGA--NFDLVLKEHEP 1560
Query: 88 PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLW 147
PS + LL + + E PV++ SSQD TV C+ GA DYL+KP+R+NELR++W
Sbjct: 1561 PSANACRLLKRMAKTEGLTRTPVVVTSSQDERETVMSCLSLGAIDYLIKPLRQNELRHIW 1620
Query: 148 QHVWRRQSSMVSG 160
VW + S SG
Sbjct: 1621 TRVWWWRKSQGSG 1633
>gi|449464732|ref|XP_004150083.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449501499|ref|XP_004161384.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 673
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L+ Y VT A +L+ D++L++V +P +
Sbjct: 36 GLRVLVVDDDPTCLKILEKMLQNCCYAVTKCNRAEIALSMLRENKNGFDIVLSDVHMPDM 95
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS+ D + V K ++ GA DYL+KPVR LRNLWQHV
Sbjct: 96 DGFKLLEQV---GLEMDLPVIMMSADDGKNVVMKGVIHGACDYLIKPVRIEALRNLWQHV 152
Query: 151 WRRQSS 156
R++ +
Sbjct: 153 VRKRKT 158
>gi|297814420|ref|XP_002875093.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
gi|297320931|gb|EFH51352.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
Length = 386
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LR+LLV+ D S I+ +L + Y+VT A +L+ R + DL+L++V +P +
Sbjct: 10 GLRILLVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGM 69
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+G+ LL V E+ ++PVIMMS +TV + GA DYL+KP+R EL+N+WQHV
Sbjct: 70 NGYKLLQQVGLLEL--DLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHV 127
Query: 151 WRRQ 154
RR+
Sbjct: 128 VRRK 131
>gi|356521815|ref|XP_003529546.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 679
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 89/160 (55%), Gaps = 6/160 (3%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D+++++V +P +
Sbjct: 32 GLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDVHMPDM 91
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS+ D S V K + GA DYL+KPVR L+N+WQH
Sbjct: 92 DGFKLL----EHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQH 147
Query: 150 VWR-RQSSMVSGNETQDESVGQQKIEATSENDAASNHSSG 188
V R R++ ++ G ++ +A+ E D +S+ + G
Sbjct: 148 VVRKRKNEWKDAEQSGSAEEGDRQPKASDEADYSSSANEG 187
>gi|359477139|ref|XP_002275142.2| PREDICTED: two-component response regulator ARR1-like [Vitis
vinifera]
Length = 681
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+G D+++++V +P +
Sbjct: 32 GLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDVHMPDM 91
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS+ D V K + GA DYL+KPVR L+N+WQH
Sbjct: 92 DGFKLL----EHIGLEMDLPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQH 147
Query: 150 VWRRQ 154
V R++
Sbjct: 148 VVRKR 152
>gi|357480191|ref|XP_003610381.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511436|gb|AES92578.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 593
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +++ L Y VT ++A E+L+ + DL++++V +P
Sbjct: 19 VGMRVLAVDDDQTCLKLLEKFLLMCKYNVTTTTKPVEALELLREKRDMFDLVISDVSMPE 78
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL V EI ++P IM+S D V K +M+GA DYLVKP+R EL+N+WQH
Sbjct: 79 MDGFKLLEQV-GLEI--DLPFIMLSGNDDRERVMKGVMKGACDYLVKPIRLEELKNIWQH 135
Query: 150 VWRRQ 154
V R++
Sbjct: 136 VVRKK 140
>gi|297841471|ref|XP_002888617.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
gi|297334458|gb|EFH64876.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
Length = 529
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ LRVL+V+ D + +I+ +L+K SY VT +A +L+ R D+++++V++P
Sbjct: 9 VGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPD 68
Query: 90 ISGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
+ GF LL EH + ++PVIMMS S V K + GA DYL+KP+R EL+ +WQ
Sbjct: 69 MDGFKLL----EHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQ 124
Query: 149 HVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQS 208
HV R+ K++ + + G + F+ G D
Sbjct: 125 HVLRK------------------KLQEVRDIEGCGYEGGGDWITRYDEAHFLGGGEDVSF 166
Query: 209 SCTKPDFEAESAHVEDMPD 227
+ DF+ E ++D D
Sbjct: 167 GKKRKDFDFEKKLLQDESD 185
>gi|359472591|ref|XP_002281291.2| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 643
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +LR+ Y VT A +L+ + D++L++V +P +
Sbjct: 32 GLRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNILREKKGCFDIVLSDVHMPDM 91
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
G+ LL EH + ++PVIMMS+ S V + + GA DYL+KP+R EL+N+WQH
Sbjct: 92 DGYKLL----EHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQH 147
Query: 150 VWRRQ 154
V R++
Sbjct: 148 VVRKK 152
>gi|224110806|ref|XP_002315642.1| type-b response regulator [Populus trichocarpa]
gi|222864682|gb|EEF01813.1| type-b response regulator [Populus trichocarpa]
Length = 250
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 17/189 (8%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L++ SY VT A +L+ R D+++++V +P +
Sbjct: 9 GLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDVYMPDM 68
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS S V K + GA DYL+KP+R ELRN+WQH
Sbjct: 69 DGFKLL----EHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 124
Query: 150 VWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGE---FIEKGSDE 206
V+R++ V E + G + + T + + + G+ C GE I+K D
Sbjct: 125 VFRKKIHEVRDIEILE---GIESFQMT--RNGSDLYEDGHFLC----GEDLTLIKKRKDI 175
Query: 207 QSSCTKPDF 215
+S + D
Sbjct: 176 ESKHDEKDI 184
>gi|307107757|gb|EFN55999.1| hypothetical protein CHLNCDRAFT_30989, partial [Chlorella
variabilis]
Length = 334
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 8/133 (6%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN---IDLILTEVDL 87
L+VL+V+ D ++V+A+L++ +Y V G A +L+ R + DL+L++V +
Sbjct: 33 GLKVLVVDDDPMCLKVVSAMLQRCNYEVDTRTSGQDALLLLRDRQEHNHQFDLVLSDVYM 92
Query: 88 PSISGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
P + GF LL EH + ++PVIMMSS V + + GA D+L+KPVR ELRN+
Sbjct: 93 PDMDGFKLL----EHIGLELDLPVIMMSSNGDTDVVLRGVTHGAVDFLIKPVRVEELRNV 148
Query: 147 WQHVWRRQSSMVS 159
WQHV RR+S V
Sbjct: 149 WQHVVRRRSLHVG 161
>gi|356564542|ref|XP_003550512.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 677
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 88/160 (55%), Gaps = 6/160 (3%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D+++++V +P +
Sbjct: 32 GLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDVHMPDM 91
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS+ D S V K + GA DYL+KPVR L+N+WQH
Sbjct: 92 DGFKLL----EHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQH 147
Query: 150 VWR-RQSSMVSGNETQDESVGQQKIEATSENDAASNHSSG 188
V R R++ ++ G + +A+ E D +S+ + G
Sbjct: 148 VVRKRKNEWKDAEQSGSAEEGDRHPKASDEADYSSSANEG 187
>gi|15226345|ref|NP_178285.1| two-component response regulator ARR14 [Arabidopsis thaliana]
gi|50400550|sp|Q8L9Y3.2|ARR14_ARATH RecName: Full=Two-component response regulator ARR14
gi|4220473|gb|AAD12696.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|20466520|gb|AAM20577.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|22136418|gb|AAM91287.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330250401|gb|AEC05495.1| two-component response regulator ARR14 [Arabidopsis thaliana]
Length = 382
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 77/127 (60%), Gaps = 2/127 (1%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LR+L+V+ D S I+ +L + Y+VT A +L+ R + DL+L++V +P +
Sbjct: 10 GLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGM 69
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+G+ LL V E+ ++PVIMMS +TV + GA DYL+KP+R EL+N+WQHV
Sbjct: 70 NGYNLLQQVGLLEM--DLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHV 127
Query: 151 WRRQSSM 157
RR+ M
Sbjct: 128 VRRKCVM 134
>gi|21593727|gb|AAM65694.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 382
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 77/127 (60%), Gaps = 2/127 (1%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LR+L+V+ D S I+ +L + Y+VT A +L+ R + DL+L++V +P +
Sbjct: 10 GLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGM 69
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+G+ LL V E+ ++PVIMMS +TV + GA DYL+KP+R EL+N+WQHV
Sbjct: 70 NGYNLLQQVGLLEM--DLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHV 127
Query: 151 WRRQSSM 157
RR+ M
Sbjct: 128 VRRKCVM 134
>gi|296083291|emb|CBI22927.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+G D+++++V +P +
Sbjct: 32 GLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDVHMPDM 91
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS+ D V K + GA DYL+KPVR L+N+WQH
Sbjct: 92 DGFKLL----EHIGLEMDLPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQH 147
Query: 150 VWRRQ 154
V R++
Sbjct: 148 VVRKR 152
>gi|302852985|ref|XP_002958010.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
gi|300256682|gb|EFJ40943.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
Length = 254
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 79/138 (57%), Gaps = 8/138 (5%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
W F LR+L+V+ D ++V +LRK SY VT + A +L+ + DL+L
Sbjct: 21 WHNF--PAGLRLLVVDDDPLCLKVVEQMLRKCSYDVTTCTNATMALNLLRDKSTEYDLVL 78
Query: 83 TEVDLPS---ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
++ L S + GF LL +V + ++PVIMMSS S V + + GA DYL+KPVR
Sbjct: 79 SDSFLVSSSDMDGFKLLEVV---GLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVR 135
Query: 140 RNELRNLWQHVWRRQSSM 157
ELRNLWQHV RR+ +
Sbjct: 136 LEELRNLWQHVVRRRRQL 153
>gi|297737623|emb|CBI26824.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +LR+ Y VT A +L+ + D++L++V +P +
Sbjct: 32 GLRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNILREKKGCFDIVLSDVHMPDM 91
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
G+ LL EH + ++PVIMMS+ S V + + GA DYL+KP+R EL+N+WQH
Sbjct: 92 DGYKLL----EHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQH 147
Query: 150 VWRRQ 154
V R++
Sbjct: 148 VVRKK 152
>gi|168015656|ref|XP_001760366.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688380|gb|EDQ74757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 114/253 (45%), Gaps = 35/253 (13%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
L+VL+V+ D+ +I+ +LR+ Y VT KA +L+ DL++++V +P +
Sbjct: 14 GLKVLVVDDDNVILKILERMLRECKYAVTTCNSATKALAMLRENRSYFDLVISDVYMPDM 73
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL + + ++PVIMMS + +V + + GA DYL+KPVR ELRN+WQHV
Sbjct: 74 DGFKLLEAI---GLELDLPVIMMSRDGEIDSVMRGIKHGACDYLLKPVRLEELRNIWQHV 130
Query: 151 WRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSSC 210
R+ S + ++ E + E D H Q +F D S
Sbjct: 131 VRKLVSPILVSK-----------EESGELDEYPKH--------QDNADF-----DATSRK 166
Query: 211 TKPDFEAESAHVEDMPDL--SRQLWGKSLQNDVKMQNHEARVNY-GQKSLVPVTEAQGSE 267
K E E+ VED+ +L +R +W L Q VNY G VP
Sbjct: 167 RKERLEDETQLVEDVNNLKKARIVWSPELH-----QQFVNAVNYLGVDKAVPRKILDIMN 221
Query: 268 VAACKEANTRAHF 280
V N +H
Sbjct: 222 VQGLTRENVASHL 234
>gi|412992344|emb|CCO20057.1| type-b response regulator [Bathycoccus prasinos]
Length = 580
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 3/122 (2%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
LRVL+V+ D +IVT +L+K Y VT+ + A E L+ + D++L++V +P +
Sbjct: 12 LRVLVVDDDVLCLKIVTKMLQKCGYTVTSTTSSVTALEYLRTKKEEFDIVLSDVHMPDMD 71
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
GF LL + + +IPV+MMS S V + ++ GA DYL+KPVR +EL+N+WQHV
Sbjct: 72 GFKLLEQI---ALDIDIPVLMMSVNADQSVVLRGIIHGAVDYLLKPVRIHELKNIWQHVV 128
Query: 152 RR 153
R+
Sbjct: 129 RK 130
>gi|7576358|dbj|BAA94549.1| response regulator 11 [Arabidopsis thaliana]
Length = 457
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 78/126 (61%), Gaps = 5/126 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ LRVL+V+ D + +I+ +L+K SY VT +A +L+ R D+++++V++P
Sbjct: 9 VGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPD 68
Query: 90 ISGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
+ GF LL EH + ++PVIMMS S V K + GA DYL+KP+R EL+ +WQ
Sbjct: 69 MDGFKLL----EHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQ 124
Query: 149 HVWRRQ 154
HV R++
Sbjct: 125 HVLRKK 130
>gi|313184318|emb|CBL94183.1| putative type-b response regulator (sensor histidine kinase) [Malus
x domestica]
Length = 674
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D+++++V +P +
Sbjct: 32 GLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEIALSLLRENKNGFDIVISDVHMPDM 91
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS+ D S V K + GA DYL+KPVR L+N+WQHV
Sbjct: 92 DGFKLLEQV---GLEMDLPVIMMSADDGQSVVMKGVTHGACDYLIKPVRIEALKNIWQHV 148
Query: 151 WRRQ 154
R++
Sbjct: 149 VRKK 152
>gi|302815333|ref|XP_002989348.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
gi|300142926|gb|EFJ09622.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
Length = 470
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 96/178 (53%), Gaps = 14/178 (7%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL+V+ D ++ +L + Y VTA ++A ++L+ + DL++++V +P
Sbjct: 13 IGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDLVISDVYMPD 72
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL L+ + ++PVIMMS S V + + GA DYL+KPVR ELRN+WQH
Sbjct: 73 MDGFKLLELI---GLEMDLPVIMMSGNGETSVVMEGITHGACDYLLKPVRIEELRNIWQH 129
Query: 150 VWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQ 207
V R++ + + E E++ E D +S Y + + + + G DEQ
Sbjct: 130 VVRKRGAREAAKE-----------ESSGEWDDSSEKFPEYTSKKRKEKDADSSGGDEQ 176
>gi|125542952|gb|EAY89091.1| hypothetical protein OsI_10579 [Oryza sativa Indica Group]
Length = 691
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ ++VL+V+ D + ++ +L + Y T +A +L+ R D+I+++V +P
Sbjct: 14 VGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVHMPD 73
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIMMS+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 74 MDGFRLLELV---GLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQH 130
Query: 150 VWRRQ 154
V R++
Sbjct: 131 VIRKK 135
>gi|115451653|ref|NP_001049427.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|24308616|gb|AAN52739.1| Putative response regulator 10 [Oryza sativa Japonica Group]
gi|108706930|gb|ABF94725.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706931|gb|ABF94726.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706932|gb|ABF94727.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|110331747|dbj|BAE97711.1| B-type response regulator [Oryza sativa Japonica Group]
gi|113547898|dbj|BAF11341.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|118790738|tpd|FAA00254.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|125585452|gb|EAZ26116.1| hypothetical protein OsJ_09978 [Oryza sativa Japonica Group]
gi|215767224|dbj|BAG99452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767240|dbj|BAG99468.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 691
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ ++VL+V+ D + ++ +L + Y T +A +L+ R D+I+++V +P
Sbjct: 14 VGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVHMPD 73
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIMMS+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 74 MDGFRLLELV---GLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQH 130
Query: 150 VWRRQ 154
V R++
Sbjct: 131 VIRKK 135
>gi|356556050|ref|XP_003546340.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 672
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 5/125 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D++L++V +P +
Sbjct: 28 GLRVLVVDDDPTCLMILERMLRACLYEVTKCQRAEVALSLLRENKNGFDIVLSDVHMPDM 87
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS+ D V K + GA DYL+KPVR L+N+WQH
Sbjct: 88 DGFKLL----EHIGLEMDLPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQH 143
Query: 150 VWRRQ 154
V R++
Sbjct: 144 VIRKR 148
>gi|15220515|ref|NP_176938.1| two-component response regulator ARR11 [Arabidopsis thaliana]
gi|50400646|sp|Q9FXD6.1|ARR11_ARATH RecName: Full=Two-component response regulator ARR11; AltName:
Full=Receiver-like protein 3
gi|11072012|gb|AAG28891.1|AC008113_7 F12A21.15 [Arabidopsis thaliana]
gi|31711702|gb|AAP68207.1| At1g67710 [Arabidopsis thaliana]
gi|110736401|dbj|BAF00169.1| response regulator 11 [Arabidopsis thaliana]
gi|332196565|gb|AEE34686.1| two-component response regulator ARR11 [Arabidopsis thaliana]
Length = 521
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 78/126 (61%), Gaps = 5/126 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ LRVL+V+ D + +I+ +L+K SY VT +A +L+ R D+++++V++P
Sbjct: 9 VGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPD 68
Query: 90 ISGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
+ GF LL EH + ++PVIMMS S V K + GA DYL+KP+R EL+ +WQ
Sbjct: 69 MDGFKLL----EHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQ 124
Query: 149 HVWRRQ 154
HV R++
Sbjct: 125 HVLRKK 130
>gi|226499956|ref|NP_001141563.1| uncharacterized protein LOC100273679 [Zea mays]
gi|194705078|gb|ACF86623.1| unknown [Zea mays]
gi|413937888|gb|AFW72439.1| two-component response regulator ARR3 [Zea mays]
Length = 206
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL V+ R I+ A+LR S +RVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 89 VLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTEP-NVSMIITDYCMPEMTGY 147
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
LL V E K IPV++MSS++ + + +C+ GA D+LVKPVR +++ ++ V R
Sbjct: 148 ELLKKVKESSKLKQIPVVIMSSENVSTRIRRCLEEGAEDFLVKPVRASDVSRVFSRVLR 206
>gi|3549639|emb|CAA06431.1| receiver-like protein 3 [Arabidopsis thaliana]
Length = 444
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 78/126 (61%), Gaps = 5/126 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ LRVL+V+ D + +I+ +L+K SY VT +A +L+ R D+++++V++P
Sbjct: 9 VGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPD 68
Query: 90 ISGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
+ GF LL EH + ++PVIMMS S V K + GA DYL+KP+R EL+ +WQ
Sbjct: 69 MDGFKLL----EHVGLELDLPVIMMSVDGETSRVMKGVHTGACDYLLKPIRMKELKIIWQ 124
Query: 149 HVWRRQ 154
HV R++
Sbjct: 125 HVLRKK 130
>gi|357449081|ref|XP_003594816.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355483864|gb|AES65067.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 606
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D++L++V +P +
Sbjct: 32 GLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMPDM 91
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS+ D + V K + GA DYL+KPVR L+N+WQH
Sbjct: 92 DGFKLL----EHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQH 147
Query: 150 VWRRQ 154
V R++
Sbjct: 148 VVRKR 152
>gi|388493620|gb|AFK34876.1| unknown [Medicago truncatula]
Length = 606
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D++L++V +P +
Sbjct: 32 GLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMPDM 91
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS+ D + V K + GA DYL+KPVR L+N+WQH
Sbjct: 92 DGFKLL----EHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQH 147
Query: 150 VWRRQ 154
V R++
Sbjct: 148 VVRKR 152
>gi|449432892|ref|XP_004134232.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449503838|ref|XP_004162202.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 660
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D++L++V +P +
Sbjct: 23 GLRVLVVDDDPTCLMILEKMLRICRYDVTNCSRAEDALSLLRQNKNGFDIVLSDVHMPDM 82
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL + + ++PVIMMS D + V K + GA DYL+KPVR L+N+WQHV
Sbjct: 83 DGFKLLEYI---GLEMDLPVIMMSVDDGKNVVMKGVTHGACDYLIKPVRMEALKNIWQHV 139
Query: 151 WRRQ 154
R++
Sbjct: 140 VRKR 143
>gi|168062796|ref|XP_001783363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665113|gb|EDQ51808.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 18/182 (9%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL+V+ D + ++ +L SYRVT A +L+ DL++++VD+P
Sbjct: 10 VGMRVLVVDDDPTCLVLLERMLILCSYRVTTCGRATDALLLLREDIGKFDLVISDVDMPD 69
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIMMS S V + ++ GA DYL+KPV ELRN+WQH
Sbjct: 70 MDGFKLLELV---GLEMDLPVIMMSGNGETSAVMEGVIHGACDYLIKPVGIKELRNVWQH 126
Query: 150 VWRRQSSMV-----------SGNETQDESVGQQKIEATSENDAASNHSSG-YMACIQSKG 197
V R++ V G E Q + G + TS +A++ + G + + KG
Sbjct: 127 VVRKKRQEVKAVSMKSIEEAGGCERQKRAGGADDADYTS---SATDTTDGNWKLSKRRKG 183
Query: 198 EF 199
EF
Sbjct: 184 EF 185
>gi|356529278|ref|XP_003533222.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 673
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D++L++V +P +
Sbjct: 28 GLRVLVVDDDPTCLMILERMLRACLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMPDM 87
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS+ D V K + GA DYL+KPVR L+N+WQH
Sbjct: 88 DGFKLL----EHIGLEMDLPVIMMSADDGKQVVMKGVTHGACDYLIKPVRIEALKNIWQH 143
Query: 150 VWR 152
V R
Sbjct: 144 VVR 146
>gi|302798186|ref|XP_002980853.1| type B response regulator [Selaginella moellendorffii]
gi|300151392|gb|EFJ18038.1| type B response regulator [Selaginella moellendorffii]
Length = 470
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL+V+ D ++ +L + Y VTA ++A ++L+ + DL++++V +P
Sbjct: 13 IGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDLVISDVYMPD 72
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL L+ + ++PVIMMS S V + + GA DYL+KPVR ELRN+WQH
Sbjct: 73 MDGFKLLELI---GLEMDLPVIMMSGNGETSVVMEGITHGACDYLLKPVRIEELRNIWQH 129
Query: 150 VWRRQSSMVSGNE 162
V R++ + + E
Sbjct: 130 VVRKRGAKEAAKE 142
>gi|226532303|ref|NP_001149732.1| two-component response regulator ARR3 [Zea mays]
gi|195629894|gb|ACG36588.1| two-component response regulator ARR3 [Zea mays]
gi|195650489|gb|ACG44712.1| two-component response regulator ARR3 [Zea mays]
gi|414884446|tpg|DAA60460.1| TPA: two-component response regulator ARR3 [Zea mays]
Length = 148
Score = 93.2 bits (230), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
++ DDS+ R IVTALLR+S YRVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 30 VIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILGSEP-NVSMIITDYWMPEMTGY 88
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
LL V E K IPV++MSS++ + + +C+ GA D+L+KPVR +++ +
Sbjct: 89 DLLKKVKESSKLKRIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRI 141
>gi|255556280|ref|XP_002519174.1| sensor histidine kinase, putative [Ricinus communis]
gi|223541489|gb|EEF43038.1| sensor histidine kinase, putative [Ricinus communis]
Length = 682
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D+++++V +P +
Sbjct: 32 GLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGYDIVISDVHMPDM 91
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PVIMMS+ ++ S V K + GA DYL+KPVR L+N+WQH
Sbjct: 92 DGFKLL----EHIGLEMDLPVIMMSADEAKSVVMKGVTHGACDYLIKPVRIEALKNIWQH 147
Query: 150 VWRRQ 154
V R++
Sbjct: 148 VVRKK 152
>gi|33330870|gb|AAQ10678.1| type-B response regulator [Catharanthus roseus]
Length = 643
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L+ Y VT A ++L+ D+++++V +P +
Sbjct: 35 GLRVLVVDDDPTCLRILEKMLKNCLYEVTKCNRAEIALKLLRDNRNGYDIVISDVHMPDM 94
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS+ DS + V K + GA DYL+KPVR L+N+WQHV
Sbjct: 95 DGFKLLEQV---GLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRIEALKNIWQHV 151
Query: 151 WRR 153
R+
Sbjct: 152 VRK 154
>gi|298103716|emb|CBM42559.1| putative B-type response regulator 13 [Populus x canadensis]
Length = 670
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D+++++V +P +
Sbjct: 16 GLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRNGYDIVISDVHMPDM 75
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL L+ + ++PVIMMS+ D + V K + GA DYL+KP+R L+N+WQHV
Sbjct: 76 DGFKLLELI---GLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIRIEALKNIWQHV 132
Query: 151 WRRQ 154
R++
Sbjct: 133 VRKR 136
>gi|357480195|ref|XP_003610383.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511438|gb|AES92580.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 597
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 8/160 (5%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
+RVL V+ D + +++ L +Y VT ++A E+L+ + DL++++V +P +
Sbjct: 23 GMRVLAVDDDPTYLKVLEKQLLTCNYNVTTTTKPVEALELLREKKDMFDLVISDVSMPDM 82
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++P IM+S D + V K ++ GA +YLVKP+R EL+++WQHV
Sbjct: 83 DGFKLLEQV---GLEMDLPFIMLSVNDDIEKVMKSVIHGACNYLVKPIRMEELKSIWQHV 139
Query: 151 WRRQSSMVSGNE--TQDESVGQQKIEATSENDAASNHSSG 188
R++ N+ D GQ + +SEN A N G
Sbjct: 140 VRKKIESKDQNQGIISDGVYGQ---DTSSENIANKNKMHG 176
>gi|109631206|gb|ABG35779.1| SRR200 [Striga asiatica]
Length = 158
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 86/146 (58%), Gaps = 15/146 (10%)
Query: 28 QRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK------------GRP 75
Q M VL V+ R+++ LL+ SSY+VT V G+KA E L +P
Sbjct: 6 QEMRFHVLAVDDSIIDRKLIERLLKTSSYQVTVVDSGVKALEFLGLLDNDDTNSKSVSQP 65
Query: 76 RN---IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAAD 132
R+ +DLI+T+ +P+++G+ LL + E EI K+IPV++MSS++ S + C+ +GA +
Sbjct: 66 RSNHIVDLIITDYSMPALTGYDLLRKIKESEILKDIPVVIMSSENIPSRINSCLEQGAQE 125
Query: 133 YLVKPVRRNELRNLWQHVWRRQSSMV 158
+ VKPV+++++ L H+ R Q +
Sbjct: 126 FFVKPVQQSDVNKLRPHLMRCQKEFI 151
>gi|325180319|emb|CCA14722.1| protein kinase putative [Albugo laibachii Nc14]
Length = 977
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+VE D+ TR +LR Y V AV +G +A + L P DL+L +V LP ++G
Sbjct: 8 VLVVEDDEFTRMATIDILRSCRYEVFAVENGKEALDALMQEPTKYDLVLCDVMLPVMNGI 67
Query: 94 ALLTLVME-------HEIC-KNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
LL +ME H + +IPV+M SS + + V C+ +GA DYL+KP++ N +
Sbjct: 68 QLLAAMMERNGFTSTHSLALHHIPVVMTSSNEEMDVVTNCLSKGAKDYLIKPIQVNTAKT 127
Query: 146 LWQHVWRRQ 154
L +HVW Q
Sbjct: 128 LVRHVWLSQ 136
>gi|195641278|gb|ACG40107.1| two-component response regulator ARR3 [Zea mays]
Length = 136
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 77/119 (64%), Gaps = 3/119 (2%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
++ DDS+ R I+ A+LR S +RVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 19 VLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTEP-NVSMIITDYCMPEMTGY 77
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
LL V E K IPV++MSS++ + + +C+ GA D+LVKPVR +++ ++ V R
Sbjct: 78 ELLKKVKESSKLKQIPVVIMSSENVSTRIRRCLEEGAEDFLVKPVRASDVSRVFSRVLR 136
>gi|147787458|emb|CAN60088.1| hypothetical protein VITISV_005486 [Vitis vinifera]
Length = 706
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 19/141 (13%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYR----------------VTAVPDGLKAWEVLKG 73
+ +RVL V+ D + ++ LLR+ Y+ VT + A ++L+
Sbjct: 22 VGMRVLAVDDDPTCLMLLDGLLRRCQYQGLVLLCFARLLLYMNFVTTTNQAITALKMLRE 81
Query: 74 RPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADY 133
N DL++++V +P + GF LL LV + ++PVIM+SS V + + GA DY
Sbjct: 82 NKNNFDLVISDVSMPDMDGFKLLELV---GLEMDLPVIMLSSHSDQKLVMRGITHGACDY 138
Query: 134 LVKPVRRNELRNLWQHVWRRQ 154
L+KPVR EL+N+WQHV RR+
Sbjct: 139 LLKPVRIEELKNIWQHVIRRK 159
>gi|224106962|ref|XP_002314325.1| type-b response regulator [Populus trichocarpa]
gi|222863365|gb|EEF00496.1| type-b response regulator [Populus trichocarpa]
Length = 634
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D+++++V +P +
Sbjct: 26 GLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRNGYDIVISDVHMPDM 85
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL L+ + ++PVIMMS+ D + V K + GA DYL+KP+R L+N+WQHV
Sbjct: 86 DGFKLLELI---GLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIRIEALKNIWQHV 142
Query: 151 WRRQ 154
R++
Sbjct: 143 VRKR 146
>gi|296082079|emb|CBI21084.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +++ LLR+ Y VT + A ++L+ DL++++V +P
Sbjct: 16 IGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDVHMPD 75
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ D V K + GA DYL+KPVR +L+N+WQH
Sbjct: 76 MDGFKLLELV---GLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQH 132
Query: 150 VWRRQ 154
V RR+
Sbjct: 133 VIRRR 137
>gi|343407542|gb|AEM23772.1| RRB2 type-b response regulator [Nicotiana tabacum]
Length = 669
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L Y VT A +L+ D+++++V +P +
Sbjct: 32 GLRVLVVDDDPTCLRILEKMLWNCHYEVTKSNRAESALSLLRENRNGFDIVISDVHMPDM 91
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS+ DS V K + GA DYL+KPVR L+N+WQHV
Sbjct: 92 DGFKLLEHV---GLEMDLPVIMMSADDSKDVVMKGVTHGACDYLIKPVRIEALKNIWQHV 148
Query: 151 WRRQ 154
R++
Sbjct: 149 IRKK 152
>gi|225430376|ref|XP_002282928.1| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 693
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +++ LLR+ Y VT + A ++L+ DL++++V +P
Sbjct: 16 IGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDVHMPD 75
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ D V K + GA DYL+KPVR +L+N+WQH
Sbjct: 76 MDGFKLLELV---GLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQH 132
Query: 150 VWRRQ 154
V RR+
Sbjct: 133 VIRRR 137
>gi|298103714|emb|CBM42558.1| putative B-type response regulator 12 [Populus x canadensis]
Length = 690
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D+++++V +P +
Sbjct: 33 GLRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIALSLLRENKNGYDIVISDVHMPDM 92
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL + + ++PVIMMS+ D + V K + GA DYL+KP+R L+N+WQHV
Sbjct: 93 DGFKLLEQI---GLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIRIEALKNIWQHV 149
Query: 151 WRRQ 154
R++
Sbjct: 150 VRKR 153
>gi|224130444|ref|XP_002328610.1| type-b response regulator [Populus trichocarpa]
gi|222838592|gb|EEE76957.1| type-b response regulator [Populus trichocarpa]
Length = 671
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y VT A +L+ D+++++V +P +
Sbjct: 33 GLRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIALSLLRENKNGYDIVISDVHMPDM 92
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL + + ++PVIMMS+ D + V K + GA DYL+KP+R L+N+WQHV
Sbjct: 93 DGFKLLEQI---GLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIRIEALKNIWQHV 149
Query: 151 WRRQ 154
R++
Sbjct: 150 VRKR 153
>gi|147863919|emb|CAN81109.1| hypothetical protein VITISV_010435 [Vitis vinifera]
Length = 693
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + +++ LLR+ Y VT + A ++L+ DL++++V +P
Sbjct: 16 IGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDVHMPD 75
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ D V K + GA DYL+KPVR +L+N+WQH
Sbjct: 76 MDGFKLLELV---GLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQH 132
Query: 150 VWRRQ 154
V RR+
Sbjct: 133 VIRRR 137
>gi|326488979|dbj|BAJ98101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 684
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ ++VL+V+ D + ++ +L + Y T +A +L+ D+I+++V +P
Sbjct: 15 VGMKVLVVDDDQTCLAVLKRMLIQCRYDATTCSQATRALAMLRENRGAFDVIISDVHMPD 74
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIMMS+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 75 MDGFRLLELV---GLEMDLPVIMMSADSRTDLVMKGIKHGACDYLIKPVRMEELKNIWQH 131
Query: 150 VWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSS 209
V R++ GN+ + S ++ T N +N + Y + E K ++
Sbjct: 132 VVRKK---FGGNKEHEHS---GSLDDTDRNRPTNNDNE-YASSANDGAEDSWKSQKKKRD 184
Query: 210 CTKPDFEAESAHVEDMPDLSRQLWGKSL-QNDVKMQNH 246
+ D E ES + R +W L Q V NH
Sbjct: 185 KEEDDSELESGDPSNNSKKPRVVWSVELHQQFVNAVNH 222
>gi|66809777|ref|XP_638612.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
gi|3183160|sp|Q23917.1|PDE2_DICDI RecName: Full=3',5'-cyclic-nucleotide phosphodiesterase regA;
Short=PDEase regA; AltName: Full=Phosphodiesterase 2;
Short=DdPDE2; AltName: Full=Response regulator protein
A; AltName: Full=cAMP-specific 3',5'-cAMP
phosphodiesterase 2
gi|1405368|gb|AAB03508.1| RegA [Dictyostelium discoideum]
gi|3046777|emb|CAA06513.1| RegA [Dictyostelium discoideum]
gi|60467179|gb|EAL65213.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
Length = 793
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+R+L+ + DD R+I+ LL+K Y VT VP+G AWE + + DL+LT+V +P I+
Sbjct: 160 VRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHIT 219
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVY--KCMMRGAADYLVKPVRRNELRN---- 145
GF LL + +H + ++IPVI+MS +V Y + G D+L KP+ + L+
Sbjct: 220 GFDLLQRINDHPVHRHIPVILMSGT-AVDYKYANDTIKIGGQDFLTKPIAKELLKKKIDT 278
Query: 146 LWQHVWRRQ 154
+ Q +W+R+
Sbjct: 279 VLQSIWQRR 287
>gi|255564288|ref|XP_002523141.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223537703|gb|EEF39326.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 473
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 3/124 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + I+ +LR Y+VT A +L+ D+++ ++ +P +
Sbjct: 34 GLRVLVVDDDRTCLLILEKMLRNCLYKVTKCRKAKDALSMLREDKNKFDIVVIDLHMPDM 93
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL + E +PV+MMSS D + K ++ GA DYL+KPVR L+ +WQHV
Sbjct: 94 DGFELLEIA---EFEMGLPVVMMSSDDDHEVIKKGVLHGACDYLIKPVRMEALKMIWQHV 150
Query: 151 WRRQ 154
R++
Sbjct: 151 IRKK 154
>gi|330794882|ref|XP_003285505.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
gi|325084508|gb|EGC37934.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
Length = 729
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+R+L+V+ DD R+++ LL+K Y VT V +G AW+ + + DL+LT+V +P I+
Sbjct: 109 VRILVVDDDDVQRKVLENLLKKFHYNVTLVSNGEIAWDNISSGQQKYDLVLTDVMMPHIT 168
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVY--KCMMRGAADYLVKPVRRNELR----N 145
GF LL + +H I KNIPVI+MS +V Y + G D+L KP+ + L+
Sbjct: 169 GFDLLQRINDHPIYKNIPVILMSGT-AVDYKYANDTIKIGGQDFLTKPIAKELLKKKIDT 227
Query: 146 LWQHVWRRQ 154
+ Q +W+R+
Sbjct: 228 VLQSIWQRK 236
>gi|118351764|ref|XP_001009157.1| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|89290924|gb|EAR88912.1| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 818
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 73/121 (60%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M + VL+ E D+ R + +L Y+VTAV +G A + L + NID++L ++ +P
Sbjct: 1 MNIHVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDELLKQDSNIDIVLLDLYMPE 60
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL+L+ EHE + IPVIMMSS V C+ +GA DY+ KP+R ++ + ++
Sbjct: 61 MDGFELLSLMQEHENLQKIPVIMMSSDKEEEKVATCIAKGAKDYIFKPLRVQNVKAIAKY 120
Query: 150 V 150
V
Sbjct: 121 V 121
>gi|297743941|emb|CBI36911.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 87/158 (55%), Gaps = 15/158 (9%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
+RVL V+ D + QI+ +L + Y+VT + +A +L+ D++L+++ +P I
Sbjct: 23 GIRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSSRFDIVLSDLHMPDI 82
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
SG LL ++ + ++PV+MMSS + T+ K ++ GA DY VKPVR + ++ +WQHV
Sbjct: 83 SGLKLLEII---GLEMDMPVVMMSSDEKRETIMKGIIHGACDYWVKPVRMDAIQLVWQHV 139
Query: 151 WRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSG 188
R++ + G +++E E+D + G
Sbjct: 140 IRKRRN------------GLKEMEHAMEDDVEGGNEEG 165
>gi|224063953|ref|XP_002301318.1| predicted protein [Populus trichocarpa]
gi|222843044|gb|EEE80591.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 94/168 (55%), Gaps = 8/168 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
+R+L+VE+D + +IV+ +L+ Y VT A +L+ + I+LIL E LP +
Sbjct: 22 GVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALHILREKEDEINLILIETHLPDM 81
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+ ++ V + ++P+++ S+ ++VS + + +GAA YL+KP+ +N+++NLWQ
Sbjct: 82 DQYEIIETV--RAMSSSLPIVVFSADNNVSAMLGWLYKGAALYLMKPIVKNDVKNLWQLT 139
Query: 151 WRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGE 198
+R++ +T SVG A + AS+ ++G + + + G+
Sbjct: 140 YRKKK------KTAVSSVGSNSFHAGLAEENASSVTAGIPSLLSTTGQ 181
>gi|242065846|ref|XP_002454212.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
gi|241934043|gb|EES07188.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
Length = 151
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 77/119 (64%), Gaps = 3/119 (2%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
++ DDS+ R I+ A+LR S +RVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 34 VLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTEP-NVSMIITDYWMPEMTGY 92
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
LL V E K IPV++MSS++ + + +C+ GA D+LVKPVR +++ ++ V R
Sbjct: 93 ELLKKVKESSKLKQIPVVIMSSENVSTRISRCLEEGAEDFLVKPVRASDVSRVFSRVLR 151
>gi|225437477|ref|XP_002269371.1| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 519
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 87/158 (55%), Gaps = 15/158 (9%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
+RVL V+ D + QI+ +L + Y+VT + +A +L+ D++L+++ +P I
Sbjct: 23 GIRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSSRFDIVLSDLHMPDI 82
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
SG LL ++ + ++PV+MMSS + T+ K ++ GA DY VKPVR + ++ +WQHV
Sbjct: 83 SGLKLLEII---GLEMDMPVVMMSSDEKRETIMKGIIHGACDYWVKPVRMDAIQLVWQHV 139
Query: 151 WRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSG 188
R++ + G +++E E+D + G
Sbjct: 140 IRKRRN------------GLKEMEHAMEDDVEGGNEEG 165
>gi|242043834|ref|XP_002459788.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
gi|241923165|gb|EER96309.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
Length = 168
Score = 89.7 bits (221), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 75/113 (66%), Gaps = 3/113 (2%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
++ DD + R +VTALLR+S YRVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 50 VIAVDDCSVDRALVTALLRRSKYRVTAVDSGKRALEILGSEP-NVSMIITDYWMPEMTGY 108
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
LL V E K IPV++MSS++ + + +C+ GA D+L+KPVR +++ +
Sbjct: 109 DLLKKVKESSKLKQIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRI 161
>gi|224089346|ref|XP_002308698.1| type-b response regulator [Populus trichocarpa]
gi|222854674|gb|EEE92221.1| type-b response regulator [Populus trichocarpa]
Length = 588
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + ++ LLR+ Y VT + A +L+ DL++++V +P
Sbjct: 17 IGMRVLAVDDDPTCLLLLETLLRRCQYTVTTTSQAITALSMLRENKNKFDLVISDVHMPD 76
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ V K + GA DYL+KPVR EL+N+WQH
Sbjct: 77 MDGFKLLELV---GLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 133
Query: 150 VWRRQ 154
V RR+
Sbjct: 134 VIRRR 138
>gi|348665892|gb|EGZ05720.1| hypothetical protein PHYSODRAFT_551172 [Phytophthora sojae]
Length = 897
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+VE D+ TR +L+ Y V AV +G +A +VL DL+L +V LP ++G
Sbjct: 8 VLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDVLVANHAKFDLVLCDVMLPVMTGI 67
Query: 94 ALLTLVMEHE-ICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
LL + +H +IP++M SS + + V C+ +GA DYL+KP++ N + L +HVW
Sbjct: 68 ELLDQIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQVNTAKTLVRHVW 126
>gi|224143763|ref|XP_002325066.1| type-b response regulator [Populus trichocarpa]
gi|222866500|gb|EEF03631.1| type-b response regulator [Populus trichocarpa]
Length = 517
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 80/123 (65%), Gaps = 3/123 (2%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
LRVL ++A+ + + A+L+K YRVT+ +A ++L+ + +++T+V +
Sbjct: 27 LRVLAIDANVVCLKYLVAILQKCQYRVTSTTLAAEALKMLRENKNDYHVVITDVKRLDMD 86
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
GF LL ++ + ++PVI++S++DS S++ K + GA DYL+KPVR E++N+WQHV
Sbjct: 87 GFKLLEII---GLEMDLPVILVSAEDSQSSIMKGIRHGARDYLLKPVRIQEMQNIWQHVV 143
Query: 152 RRQ 154
R++
Sbjct: 144 RKR 146
>gi|125600088|gb|EAZ39664.1| hypothetical protein OsJ_24093 [Oryza sativa Japonica Group]
Length = 212
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 75/113 (66%), Gaps = 3/113 (2%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
++ DDS+ R ++TALLR+S YRVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 95 VMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEP-NVSMIITDYWMPEMTGY 153
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
LL + E K IPV++MSS++ + + +C+ GA D+L+KPVR ++ +
Sbjct: 154 DLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRI 206
>gi|110617744|gb|ABG78591.1| response regulator [Oryza sativa Japonica Group]
Length = 210
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 75/113 (66%), Gaps = 3/113 (2%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
++ DDS+ R ++TALLR+S YRVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 93 VMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEP-NVSMIITDYWMPEMTGY 151
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
LL + E K IPV++MSS++ + + +C+ GA D+L+KPVR ++ +
Sbjct: 152 DLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRI 204
>gi|109631196|gb|ABG35774.1| SRR384 [Striga asiatica]
Length = 569
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L+ Y VT A + L+ + D+++++V +P +
Sbjct: 30 GLRVLVVDDDPTCLRILEKMLKNCLYEVTTCNRAGIALKFLRDKRNVYDIVISDVHMPDM 89
Query: 91 SGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH + ++PV MMS+ DS + V K + GA DYL+KP+R L+N+WQH
Sbjct: 90 DGFKLL----EHVGLEMDLPVTMMSADDSKNVVMKGVTHGACDYLIKPIRMEALKNIWQH 145
Query: 150 VWRRQ 154
+ R++
Sbjct: 146 LVRKR 150
>gi|125558184|gb|EAZ03720.1| hypothetical protein OsI_25852 [Oryza sativa Indica Group]
Length = 211
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 75/113 (66%), Gaps = 3/113 (2%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
++ DDS+ R ++TALLR+S YRVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 94 VMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEP-NVSMIITDYWMPEMTGY 152
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
LL + E K IPV++MSS++ + + +C+ GA D+L+KPVR ++ +
Sbjct: 153 DLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRI 205
>gi|224130168|ref|XP_002320769.1| pseudo response regulator [Populus trichocarpa]
gi|222861542|gb|EEE99084.1| pseudo response regulator [Populus trichocarpa]
Length = 504
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 95/170 (55%), Gaps = 7/170 (4%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +R+L+VE+D + +IV+ +L+ Y VT A +L+ + I+LIL E LP
Sbjct: 21 IGVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALRILREKEDEINLILIETRLPD 80
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
++ + +L + E ++P+++ S+ ++ S + C+ +GAA YL+KP+ +N+++NLWQ
Sbjct: 81 MNQYEILETLGE---LSSLPIVVFSADNNESAMLGCLYKGAALYLMKPIIKNDVKNLWQL 137
Query: 150 VWRRQ-SSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGE 198
+R + + VSG + G + +A+S + + S M KG+
Sbjct: 138 TYRTKIKTAVSGKGSNSFHGGSSEEKASS---VTAGNPSSTMGMTDQKGK 184
>gi|242070155|ref|XP_002450354.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
gi|241936197|gb|EES09342.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
Length = 694
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRP--RNIDLILTEVDLP 88
LRVL V+ D +I+ L+ +Y T V D A ++L+ R DL++++V +P
Sbjct: 9 GLRVLAVDDDRVCLKILERQLKYCNYNATVVTDARTALDMLRERKDGNQFDLVISDVVMP 68
Query: 89 SISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
++ GF LL L+ + ++PVIM+S+ + T+ K + GA DY+VKPVR +LR +W
Sbjct: 69 NMDGFKLLELI---GLEMDLPVIMLSANNETQTIMKGIKHGACDYIVKPVRLEQLRGIWT 125
Query: 149 HVWRR-----QSSMVSGNE 162
HV + ++++ SGN+
Sbjct: 126 HVVKNGKTDPRNTISSGND 144
>gi|303283994|ref|XP_003061288.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457639|gb|EEH54938.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 711
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
L VLLVE D ST V A+LR + VT +G +A + L IDL+LT++ +P +
Sbjct: 53 LSVLLVEDDHSTLVFVKAMLRSCGHSVTTATNGQEAIDALLDPSSAIDLVLTDIMMPEVD 112
Query: 92 GFALLTLVMEHE-ICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
G L+ +V + ++IP+I+MS+ DS KC GA DYLVKPV++ ++ +L +H
Sbjct: 113 GLELMKIVQSSDKPFRSIPIIVMSTVDSDEFQAKCTEAGAQDYLVKPVKKAQMADLARHT 172
Query: 151 WRRQSSM 157
+ M
Sbjct: 173 VGGGAGM 179
>gi|325179822|emb|CCA14225.1| protein kinase putative [Albugo laibachii Nc14]
Length = 935
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 3/128 (2%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+R+L+VE D TR +L+ Y V+AV +G +A + L+ + DL+L +V LP ++
Sbjct: 6 VRILVVEDDAFTRIATIDILQSCKYNVSAVENGKEALQTLQQSYQQYDLVLCDVMLPCMT 65
Query: 92 GFALLTLVMEHEICKN-IPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
G LL + H N IP++M S + + V C+ +GA DYL+KP++ N + L +HV
Sbjct: 66 GIELLEAIQAHPTRFNHIPIVMTSCNEGMDVVKNCLSKGAKDYLIKPIQVNTAKTLVRHV 125
Query: 151 W--RRQSS 156
W R+Q S
Sbjct: 126 WLHRQQHS 133
>gi|146161471|ref|XP_001007239.2| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|146146737|gb|EAR86994.2| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 847
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 74/131 (56%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
++ VL+ E D+ R + +L Y+VTAV +G A + L NID++L ++ +P +
Sbjct: 8 SIHVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDELLKADSNIDIVLLDLYMPEM 67
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
G LL L+ EHE K IPVIMMS + V C+ GA DYLVKP+R ++ L ++V
Sbjct: 68 DGIELLLLMQEHEHLKRIPVIMMSFDNEQERVAYCIANGAKDYLVKPLRIQNVKGLAKYV 127
Query: 151 WRRQSSMVSGN 161
++ GN
Sbjct: 128 EYNPNNTTVGN 138
>gi|357142908|ref|XP_003572733.1| PREDICTED: two-component response regulator ARR3-like [Brachypodium
distachyon]
Length = 143
Score = 88.2 bits (217), Expect = 9e-15, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
L VL V+ R ++ +LR S +RVTAV G +A E+L P N+ +I+T+ +P ++
Sbjct: 24 LHVLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLGLEP-NVSMIITDYWMPEMT 82
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
G+ LL V E K IPV++MSS++ + + +C+ GA D+LVKPVR +++ ++ V
Sbjct: 83 GYELLKKVKESSKLKQIPVVIMSSENVPTRISRCLEEGAEDFLVKPVRPSDVSRVFSRV 141
>gi|303271521|ref|XP_003055122.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
gi|226463096|gb|EEH60374.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
Length = 1334
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+ VLLV DD+ LLR+ Y+VT G +A +L+ R +L+LT+V +P +
Sbjct: 10 VHVLLV--DDA------GLLRRCQYQVTTASSGREAMALLE-RGTQFNLLLTDVMMPDVD 60
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
G LL V + + +PV+MMSS + V C+ GA DY++KPV ++++W HVW
Sbjct: 61 GPTLLHFVRNNPLYAEMPVVMMSSNEHADMVMNCIRLGAEDYIIKPVTNKAVKHMWAHVW 120
Query: 152 RRQS--SMVSGNETQDESVGQQKIEATS 177
RR+ MV E E +++ EA +
Sbjct: 121 RRKQRYQMVPRFENGREVDEEREFEAAA 148
>gi|242085174|ref|XP_002443012.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
gi|241943705|gb|EES16850.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
Length = 551
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 5/124 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN--IDLILTEVDLP 88
LRVL V+ D +I+ L+ +Y T V D A ++L+ R DL++++V +P
Sbjct: 9 GLRVLAVDDDRVCLKILERQLKYCNYNATVVSDARTALDMLRERKEGNQFDLVISDVIMP 68
Query: 89 SISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
++ GF LL L+ + ++PVIM+S+ T+ K + GA DY+VKPVR +LR +W
Sbjct: 69 NMDGFKLLELI---GLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRGIWT 125
Query: 149 HVWR 152
HV +
Sbjct: 126 HVVK 129
>gi|357116980|ref|XP_003560254.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 172
Score = 87.8 bits (216), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
++ DDS+ R ++TALLR+S Y+VTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 55 VMAVDDSSVDRAVITALLRRSKYKVTAVDSGKRALEILDSEP-NVSMIITDYWMPEMTGY 113
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
LL V E K IPV++MSS++ + + +C+ GA ++L+KPVR +++ +
Sbjct: 114 DLLKKVKESSELKQIPVVIMSSENVPTRITRCLEEGAEEFLLKPVRPSDISRI 166
>gi|115450024|ref|NP_001048613.1| Os02g0830200 [Oryza sativa Japonica Group]
gi|48716336|dbj|BAD22948.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273479|emb|CAI79407.1| Type A response regulator 3 [Oryza sativa Indica Group]
gi|87116380|dbj|BAE79349.1| typeA response regulator 3 [Oryza sativa Japonica Group]
gi|113538144|dbj|BAF10527.1| Os02g0830200 [Oryza sativa Japonica Group]
gi|118790834|tpd|FAA00265.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125541719|gb|EAY88114.1| hypothetical protein OsI_09552 [Oryza sativa Indica Group]
gi|125584256|gb|EAZ25187.1| hypothetical protein OsJ_08987 [Oryza sativa Japonica Group]
Length = 131
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/117 (41%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL V+ R +++ LLR S YRVT V G +A EVL RN+ +I+T+ +P ++GF
Sbjct: 13 VLAVDDSIVDRTVISRLLRSSKYRVTTVDSGKRALEVLS-LDRNVHMIITDYCMPEMTGF 71
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
LL V E K IPV++MSS++S + + +C+ GA D+L+KPVR +++ L V
Sbjct: 72 DLLKRVKESAELKEIPVVLMSSENSPTRIRRCLEEGAEDFLIKPVRPSDVSRLCNRV 128
>gi|222629233|gb|EEE61365.1| hypothetical protein OsJ_15511 [Oryza sativa Japonica Group]
Length = 526
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL V+ R +++ +LR S +RVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 17 VLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLGSEP-NVSMIITDYWMPEMTGY 75
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
LL V E K IPV++MSS++ + + +C+ GA D+L+KPV+ +++ L V R
Sbjct: 76 ELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSDVSRLCSRVLRI 135
Query: 154 QSSMVSGNETQDESVGQQKIEATSENDAASNH 185
+ ++ + K E + ++ +SNH
Sbjct: 136 AYDDRNQKMRANDIISDSKTEFSGRDNNSSNH 167
>gi|301118478|ref|XP_002906967.1| protein kinase, putative [Phytophthora infestans T30-4]
gi|262108316|gb|EEY66368.1| protein kinase, putative [Phytophthora infestans T30-4]
Length = 897
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+VE D+ TR +L+ Y V AV +G +A ++L DL+L +V LP ++G
Sbjct: 8 VLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDLLVTNHAKFDLVLCDVMLPVMTGI 67
Query: 94 ALLTLVMEHE-ICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
LL + +H +IP++M SS + + V C+ +GA DYL+KP++ N + L +HVW
Sbjct: 68 ELLDEIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQVNTAKTLVRHVW 126
>gi|115447443|ref|NP_001047501.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|49389191|dbj|BAD26481.1| putative response regulator [Oryza sativa Japonica Group]
gi|87116382|dbj|BAE79350.1| typeA response regulator 11 [Oryza sativa Japonica Group]
gi|113537032|dbj|BAF09415.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|118790875|tpd|FAA00270.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218191220|gb|EEC73647.1| hypothetical protein OsI_08171 [Oryza sativa Indica Group]
gi|222623289|gb|EEE57421.1| hypothetical protein OsJ_07618 [Oryza sativa Japonica Group]
Length = 147
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/117 (38%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL V+ R ++ +LR S +RVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 30 VLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLGSEP-NVSMIITDYWMPEMTGY 88
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
LL V E K IPV++MSS++ + + +C+ GA D+LVKPVR +++ L+ V
Sbjct: 89 ELLKKVKESSKLKKIPVVIMSSENVPTRISRCLEEGAEDFLVKPVRPSDVSRLFSRV 145
>gi|358345516|ref|XP_003636823.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|358348885|ref|XP_003638472.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355502758|gb|AES83961.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355504407|gb|AES85610.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|403502189|gb|AFR46617.1| response regulator 1 [Medicago truncatula]
Length = 228
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D ++ ++ LLR Y VT + + A +L+ DL++ EV +P
Sbjct: 10 IGMRVLAVDDDPTSLLLLETLLRSCQYHVTTTSEAITALTMLQENIDMFDLVIAEVHMPD 69
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ G LL LV + ++PVIM+S+ V K + GA D+L+KPVR ELRN+WQH
Sbjct: 70 MDGLKLLELV---GLEMDLPVIMLSAHGETELVMKAISHGARDFLLKPVRLEELRNIWQH 126
Query: 150 VWRRQSS 156
V R + S
Sbjct: 127 VIRNKES 133
>gi|403374229|gb|EJY87054.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 834
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LL E + R + +L Y VT V +G KA L+ R DL+L ++ +P + GF
Sbjct: 9 ILLAEDEQFQRLALYDILELCDYEVTTVENGKKALVELRDETREFDLVLLDLYMPEMDGF 68
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
LLTL+ E E +PV++MS+ + C+ GA DYLVKPVR E + L +H+
Sbjct: 69 ELLTLMQEDEKLSLLPVVVMSADGDKDIIANCLRMGAKDYLVKPVRFQECKGLVRHM 125
>gi|51038103|gb|AAT93906.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222631502|gb|EEE63634.1| hypothetical protein OsJ_18451 [Oryza sativa Japonica Group]
Length = 368
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 27/161 (16%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYR-----------------VTAVPDGLKAWEVLK 72
+ +RVLL++ + +I+T LL Y+ VT A E L
Sbjct: 23 VGMRVLLIDESTTYLKIITKLLLNCGYKGLTVTNFEITYVWRVDEVTPKTAARDAVEELH 82
Query: 73 GRPRNIDLILTEVDLPS-ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAA 131
P + D++LTEV P+ I GF LL ++PV++ S+ D TV KC+ GA
Sbjct: 83 ENPWSYDMVLTEVHAPAGIDGFNLLQYAGTD---MDLPVVVFSADDDKRTVLKCVNSGAC 139
Query: 132 DYLVKPVRRNELRNLWQHVWRRQ------SSMVSGNETQDE 166
DYLVKP+R EL+N+WQHV+RR+ + +GN ++ E
Sbjct: 140 DYLVKPLRHEELKNIWQHVYRRKLRSGGRRAAAAGNSSKGE 180
>gi|413951616|gb|AFW84265.1| putative two-component response regulator family protein [Zea mays]
Length = 598
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 81/152 (53%), Gaps = 31/152 (20%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYR-------VTAVPDGLK-----------AWEVLK 72
LRVL+V+ D + +I+ +LRK SY V A G+ A ++L+
Sbjct: 12 GLRVLVVDDDPTWLKILEKMLRKCSYEDAMSDRTVIARTGGISSCVTTCGLASVALQILR 71
Query: 73 GRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVI----------MMSSQDSVSTV 122
R D+++++V++P + GF LL L+ + ++PVI +MS S V
Sbjct: 72 ERRNKFDIVISDVNMPDMDGFKLLELI---GLEMDLPVISTKLLQSVSTVMSIDGETSRV 128
Query: 123 YKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ 154
K + GA DYL+KPVR ELRN+WQHV+R++
Sbjct: 129 MKGVHHGACDYLLKPVRMKELRNIWQHVYRKK 160
>gi|449528748|ref|XP_004171365.1| PREDICTED: uncharacterized protein LOC101224737 [Cucumis sativus]
Length = 631
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+ +LLV+ D ++ IV+A+LR Y+V + D ++A + L+ R DL++T++ +P ++
Sbjct: 9 IHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLHMPQMN 68
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
G L VM+ +PVIMMS+ + S + K + G A Y+VKP+ ++++++WQ+
Sbjct: 69 GLQLQKKVMQE---FKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQY 123
>gi|359828774|gb|AEV76989.1| type A response regulator 5, partial [Triticum aestivum]
Length = 119
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 76/119 (63%), Gaps = 3/119 (2%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
++ DDS+ R +++ +LR S +RVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 2 VLAVDDSSVDRAVISGILRSSRFRVTAVDSGKRALELLGSEP-NVSMIITDYWMPEMTGY 60
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
LL V E K IPV++MSS++ + + +C+ GA D+L+KPVR +++ L V R
Sbjct: 61 ELLKKVKESSKLKEIPVVIMSSENVPTRISRCLEEGAEDFLMKPVRPSDVSRLCSRVLR 119
>gi|356528234|ref|XP_003532710.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR11-like [Glycine max]
Length = 581
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ + + + L +S VT +A + L+ R D+++++V++P +
Sbjct: 18 GLRVLVVDDXANIISLSNSFLLYAS--VTTCCLATEALKKLRERKEAYDIVISDVNMPDM 75
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL V + ++PVIMMS S V K + GA DYL+KP+R ELRN+WQHV
Sbjct: 76 DGFKLLEQV---GLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 151 WRRQ 154
+R++
Sbjct: 133 FRKR 136
>gi|162458935|ref|NP_001104854.1| aberrant phyllotaxy1 [Zea mays]
gi|11041692|dbj|BAB17300.1| response regulator [Zea mays]
gi|414586309|tpg|DAA36880.1| TPA: aberrant phyllotaxy1 [Zea mays]
Length = 135
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
++ DDS+ R ++ +LR S +RVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 18 VLAVDDSSVDRAVIAGILRSSQFRVTAVDSGKRALELLGTEP-NVSMIITDYWMPEMTGY 76
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
LL + E K IPV++MSS++ + + +C+ GA D+L+KPVR +++ L V R
Sbjct: 77 ELLKKIKESSRLKEIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRPSDVSRLCSRVLR 135
>gi|224141943|ref|XP_002324320.1| type-b response regulator [Populus trichocarpa]
gi|222865754|gb|EEF02885.1| type-b response regulator [Populus trichocarpa]
Length = 661
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + ++ LLR+ Y VT + A +L+ DL++++V +P
Sbjct: 17 IGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLRENKNKFDLVISDVHMPD 76
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ V K + GA YL+KPVR EL+ +WQH
Sbjct: 77 MDGFKLLELV---GLEMDLPVIMLSANGDPKLVMKGITHGACYYLLKPVRIEELKTIWQH 133
Query: 150 VWRRQSS 156
V RR+ S
Sbjct: 134 VIRRKKS 140
>gi|298103726|emb|CBM42564.1| putative B-type response regulator 22 [Populus x canadensis]
Length = 668
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + ++ LLR+ Y VT + A +L+ DL++++V +P
Sbjct: 17 IGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLRENKNKFDLVISDVHMPD 76
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LL LV + ++PVIM+S+ V K + GA YL+KPVR EL+ +WQH
Sbjct: 77 MDGFKLLELV---GLEMDLPVIMLSANGDPKLVMKGITHGACYYLLKPVRIEELKTIWQH 133
Query: 150 VWRRQSS 156
V RR+ S
Sbjct: 134 VIRRKKS 140
>gi|31338862|dbj|BAC77081.1| B-type response regulator [Oryza glaberrima]
Length = 341
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 3/128 (2%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L LRVL+++ D S ++ LL K SY+VT + +A + P+ +DL++++
Sbjct: 6 LWPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAF 65
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
P+ G +L V IP ++M+S +TV K + GA+D+L+KPVR EL N+
Sbjct: 66 FPTEDGLLILQEVTSK---FGIPTVIMASSGDTNTVMKYVANGASDFLLKPVRIEELSNI 122
Query: 147 WQHVWRRQ 154
WQH++R+Q
Sbjct: 123 WQHIFRKQ 130
>gi|357164784|ref|XP_003580165.1| PREDICTED: two-component response regulator ARR4-like [Brachypodium
distachyon]
Length = 137
Score = 85.5 bits (210), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
A VL V+ R ++T +LR S +RVTAV +A E+L G N+ +I+T+ +P +
Sbjct: 17 APHVLAVDDSSVDRAVITGILRSSKFRVTAVDSAKRALELL-GSGANVSMIITDYWMPDM 75
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+G+ LL V E + IPV++MSS++ + + +C+ GA D+L+KPVRR+++ L V
Sbjct: 76 TGYELLKKVKESSKLREIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRRSDVSRLCSRV 135
>gi|297796727|ref|XP_002866248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312083|gb|EFH42507.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ + + + + LL + Y VT + KA E+L+ DL++++V++P
Sbjct: 16 VGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALELLRENSNMFDLVISDVEMPD 75
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL + +E ++ PVIM+S+ +V K ++ GA DYLVKPV EL+N+W H
Sbjct: 76 TDGFKLLEIGLEMDL----PVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHH 131
Query: 150 VWRR 153
V ++
Sbjct: 132 VVKK 135
>gi|57834122|emb|CAE05717.2| OSJNBb0065J09.13 [Oryza sativa Japonica Group]
Length = 137
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL V+ R +++ +LR S +RVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 17 VLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLGSEP-NVSMIITDYWMPEMTGY 75
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
LL V E K IPV++MSS++ + + +C+ GA D+L+KPV+ +++ L V R
Sbjct: 76 ELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSDVSRLCSRVLR 134
>gi|297733625|emb|CBI14872.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 68/106 (64%), Gaps = 5/106 (4%)
Query: 50 LLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEH-EICKNI 108
+L+K SY +T A +L+ R + D+I+++V++P + GF LL EH E+ ++
Sbjct: 1 MLKKCSYEMTTCCVARDALSMLQERKNSFDIIISDVNMPDMDGFQLL----EHLEVEMDL 56
Query: 109 PVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ 154
PVI++S ++ V K + GA DYL+KPVR EL+N+WQHV R++
Sbjct: 57 PVILISVDGEMNRVMKGVQSGACDYLLKPVRMEELKNIWQHVLRKK 102
>gi|115459496|ref|NP_001053348.1| Os04g0524300 [Oryza sativa Japonica Group]
gi|71273483|emb|CAI79409.1| Type A response regulator 5 [Oryza sativa Indica Group]
gi|87116378|dbj|BAE79348.1| typeA response regulator 5 [Oryza sativa Japonica Group]
gi|113564919|dbj|BAF15262.1| Os04g0524300 [Oryza sativa Japonica Group]
gi|116310946|emb|CAH67883.1| OSIGBa0153E02-OSIGBa0093I20.12 [Oryza sativa Indica Group]
gi|118790846|tpd|FAA00266.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215741219|dbj|BAG97714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195239|gb|EEC77666.1| hypothetical protein OsI_16696 [Oryza sativa Indica Group]
Length = 134
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL V+ R +++ +LR S +RVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 17 VLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLGSEP-NVSMIITDYWMPEMTGY 75
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
LL V E K IPV++MSS++ + + +C+ GA D+L+KPV+ +++ L V R
Sbjct: 76 ELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDFLLKPVQPSDVSRLCSRVLR 134
>gi|50400641|sp|Q9FGT7.2|ARR18_ARATH RecName: Full=Two-component response regulator ARR18
Length = 635
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ + + + + LL + Y VT + KA E+L+ DL++++V++P
Sbjct: 16 VGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPD 75
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL + +E ++ PVIM+S+ +V K ++ GA DYLVKPV EL+N+W H
Sbjct: 76 TDGFKLLEIGLEMDL----PVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHH 131
Query: 150 VWRR 153
V ++
Sbjct: 132 VVKK 135
>gi|449446191|ref|XP_004140855.1| PREDICTED: uncharacterized protein LOC101217116 [Cucumis sativus]
Length = 634
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+ +LLV+ D ++ IV+A+LR Y+V + D ++A + L+ R DL++T++ +P ++
Sbjct: 9 IHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLHMPQMN 68
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
G L VM+ +PVIMMS+ + S + K + G A Y+VKP+ ++++++WQ+
Sbjct: 69 GLQLQKKVMQEF---KLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQY 123
>gi|255541448|ref|XP_002511788.1| sensor histidine kinase, putative [Ricinus communis]
gi|223548968|gb|EEF50457.1| sensor histidine kinase, putative [Ricinus communis]
Length = 437
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
+ +L+V+ D + IV+ +L S Y+V A +L+ R +DLILTEV LP +
Sbjct: 18 GVSILVVDCDSACLAIVSKMLYISGYKVITAKRATDALHILRERQYELDLILTEVHLPDM 77
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+ LL + E +P++++S+ D + + C+ +GA YL+KP+ N++++LWQ
Sbjct: 78 DKYELLETMAE---VSCLPIVILSADDDENAMLGCLFKGAVFYLLKPITMNDVKSLWQF- 133
Query: 151 WRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSSC 210
S V + + G S + ASN +S ++ + + + +K E
Sbjct: 134 -----SCVKNRKNNVATEGSHSYHGHSTPEIASNEASECLSVLDTSQQNAQKS--EGKEL 186
Query: 211 TKPDFEAESAHVEDMPDLSRQLWGKSLQN 239
+ D + E+ P + +W L +
Sbjct: 187 QEMDKDEEATVTSTFPKKPKLIWTNELHD 215
>gi|242076534|ref|XP_002448203.1| hypothetical protein SORBIDRAFT_06g022960 [Sorghum bicolor]
gi|241939386|gb|EES12531.1| hypothetical protein SORBIDRAFT_06g022960 [Sorghum bicolor]
Length = 134
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
++ DDS+ R ++ +LR S +RVTAV G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 17 VLAVDDSSVDRAVIAGILRSSHFRVTAVDSGKRALELLGTEP-NVSMIITDYWMPEMTGY 75
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
LL V E K IPV++MSS++ + + +C+ GA D+L+KPVR ++ L V R
Sbjct: 76 ELLKKVKESSRLKEIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRPADVSRLCSRVLR 134
>gi|75327667|sp|Q7Y0W5.1|EHD1_ORYSJ RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338856|dbj|BAC77078.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L LRVL+++ D S ++ LL K SY+VT + +A + P+ +DL++++
Sbjct: 6 LWPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAF 65
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
P+ G +L V IP ++M+S +TV K + GA D+L+KPVR EL N+
Sbjct: 66 FPTEDGLLILQEVTSK---FGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNI 122
Query: 147 WQHVWRRQ 154
WQH++R+Q
Sbjct: 123 WQHIFRKQ 130
>gi|225457351|ref|XP_002284703.1| PREDICTED: two-component response regulator-like APRR1-like [Vitis
vinifera]
Length = 163
Score = 84.7 bits (208), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 79/141 (56%)
Query: 22 KWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLI 81
K + R LR+LL + + + + V +LL++ SY+V +V +A VL +ID++
Sbjct: 23 KIRALIDRSKLRILLCDTNAGSCKEVASLLKECSYQVISVGSTGEAIHVLSSEGPSIDIV 82
Query: 82 LTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
L E+DLP + +L + E + + IPVIM+ ++D +S + C+ GA DYL+ P+ N
Sbjct: 83 LAELDLPMANCLKMLKYITEDQELRCIPVIMLVTEDKISMIANCLRYGAVDYLLTPLGIN 142
Query: 142 ELRNLWQHVWRRQSSMVSGNE 162
EL NL H+ + + S E
Sbjct: 143 ELLNLSIHMESKAHAPTSREE 163
>gi|31338858|dbj|BAC77079.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L LRVL+++ D S ++ LL K SY+VT + +A + P+ +DL++++
Sbjct: 6 LWPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAF 65
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
P+ G +L V IP ++M+S +TV K + GA D+L+KPVR EL N+
Sbjct: 66 FPTEDGLLILQEVTSK---FGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNI 122
Query: 147 WQHVWRRQ 154
WQH++R+Q
Sbjct: 123 WQHIFRKQ 130
>gi|75327665|sp|Q7Y0W3.1|EHD1_ORYSI RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338860|dbj|BAC77080.1| B-type response regulator [Oryza sativa Indica Group]
Length = 341
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L LRVL+++ D S ++ LL K SY+VT + +A + P+ +DL++++
Sbjct: 6 LWPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAF 65
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
P+ G +L V IP ++M+S +TV K + GA D+L+KPVR EL N+
Sbjct: 66 FPTEDGLLILQEVTSK---FGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNI 122
Query: 147 WQHVWRRQ 154
WQH++R+Q
Sbjct: 123 WQHIFRKQ 130
>gi|145359387|ref|NP_200616.3| response regulator 18 [Arabidopsis thaliana]
gi|332009612|gb|AED96995.1| response regulator 18 [Arabidopsis thaliana]
Length = 618
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 73/122 (59%), Gaps = 4/122 (3%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+RVL V+ + + + + LL + Y VT + KA E+L+ DL++++V++P
Sbjct: 1 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 60
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
GF LL + +E ++ PVIM+S+ +V K ++ GA DYLVKPV EL+N+W HV
Sbjct: 61 GFKLLEIGLEMDL----PVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVV 116
Query: 152 RR 153
++
Sbjct: 117 KK 118
>gi|147805870|emb|CAN64871.1| hypothetical protein VITISV_039966 [Vitis vinifera]
Length = 570
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 20/140 (14%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSS---------------YRVTAVPDGLKAWEVLKGRP 75
LRVL V+ D + +I+ + RK RVT A +L+ R
Sbjct: 13 GLRVLAVDDDPAWLKILLIIFRKKLNFAGVICRMFPKLYLARVTTCCVARDALSMLQERK 72
Query: 76 RNIDLILTEVDLPSISGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYL 134
+ D+I+++V++P + GF LL EH E+ ++PVI++S ++ V K + GA DYL
Sbjct: 73 NSFDIIISDVNMPDMDGFQLL----EHLEVEMDLPVILISVDGEMNRVMKGIQSGACDYL 128
Query: 135 VKPVRRNELRNLWQHVWRRQ 154
+KPVR EL+N+WQHV R++
Sbjct: 129 LKPVRMEELKNIWQHVLRKK 148
>gi|123486693|ref|XP_001324781.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
gi|121907669|gb|EAY12558.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
Length = 637
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
+R L +L V+ D VT L+ Y V+ +G +A EVLK DLIL++V
Sbjct: 7 FRRDDLHILAVDDDAVQLHAVTKALKSLGYHVSNASNGQEALEVLKSG-NTFDLILSDVM 65
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
+P ++G L + IP+IMMSS D V+ C+ +GA DY++KP+ L+N+
Sbjct: 66 MPVMNGPQFLQETRADSRFEQIPIIMMSSNDQYEIVFDCLSKGADDYIIKPLTPQVLKNM 125
Query: 147 WQHVWRRQSSMVSGNETQDESVGQQKIE 174
+ +VW ++ + + Q +++ ++ I+
Sbjct: 126 YANVWLKRKQNAAAAKVQHQNIEKEVIQ 153
>gi|147775384|emb|CAN78184.1| hypothetical protein VITISV_031283 [Vitis vinifera]
Length = 609
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 6/156 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ L +++V+ D IV +L+ Y V V A L+ R LI+T+V +P
Sbjct: 19 VGLHIMVVDDDVICLSIVAGILKTWKYEVVTVNSAQDALTTLRTRSNFFHLIVTDVHMPE 78
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF LV E ++PV+MMS+ D S++ + + GAA Y+VKPV ++L+NLWQ+
Sbjct: 79 MDGFEFQRLVHEE---FHLPVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQY 135
Query: 150 V--WRRQSSMVSGNETQDESVGQQKIEATSENDAAS 183
++ S + E + + G +E TS N+ S
Sbjct: 136 AVGXKKGKSHIVMQEI-ERTQGASXLEKTSNNEVES 170
>gi|2244969|emb|CAB10390.1| hypothetical protein [Arabidopsis thaliana]
gi|3549643|emb|CAA06433.1| receiver-like protein 5 [Arabidopsis thaliana]
gi|7268360|emb|CAB78653.1| hypothetical protein [Arabidopsis thaliana]
Length = 644
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 27/202 (13%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN-IDLILTEVDLPSI 90
LRVL+V+ D + I+ +L YR +A + GR +N D+++++V +P +
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYREQ------RAHCLCFGRTKNGFDIVISDVHMPDM 81
Query: 91 SGFALL--------TLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
GF LL V+ + K + VI+MS+ DS S V K + GA DYL+KPVR
Sbjct: 82 DGFKLLEHVGLEMDLPVINLNVLKPL-VIVMSADDSKSVVLKGVTHGAVDYLIKPVRIEA 140
Query: 143 LRNLWQHVWRRQS-----SMVSGNETQDESVG----QQKIEATSENDAASNHSSGYMACI 193
L+N+WQHV R++ S SG +D QQ E N ++ N +G +
Sbjct: 141 LKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRK 200
Query: 194 QSKGEFIEKGSDEQ--SSCTKP 213
+ + E ++G D++ SS KP
Sbjct: 201 RKEEEVDDQGDDKEDSSSLKKP 222
>gi|42571259|ref|NP_973703.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|330255659|gb|AEC10753.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 351
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 113 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
MSSQDS+ V KCM+RGAADYL+KP+R+NEL+NLWQHVWRR
Sbjct: 1 MSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 41
>gi|340508704|gb|EGR34354.1| hypothetical protein IMG5_014920 [Ichthyophthirius multifiliis]
Length = 545
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 70/119 (58%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+ VL+ E D+ R + +L +Y+VT V +G A + L NID++L ++ +P +
Sbjct: 11 IHVLVAEDDNFQRLALIDVLTLCNYQVTDVENGRLARDELLKEDSNIDVVLLDLWMPEMD 70
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
G+ LL L+ +E +NIPVIMMS+ + V C+ GA DYLVKP+R ++ + HV
Sbjct: 71 GWELLCLMQNYEKLRNIPVIMMSADNEQEKVALCLAHGAKDYLVKPIRIQMVKGIANHV 129
>gi|297821174|ref|XP_002878470.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
gi|297324308|gb|EFH54729.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
Length = 431
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
++RVLLV+AD ++ + L+ + SY+VT DG +A L + IDL++ + +P I
Sbjct: 40 SIRVLLVDADSNSLLPMKNLMIQYSYQVTKYEDGEEAMAFLMKNKQEIDLVIWDFHMPDI 99
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+G L + + ++PV++MS TV + + GA D+LVKPV + + LW+HV
Sbjct: 100 NGLDALNTIGKE---MDLPVVIMSHDHKKETVMESIKYGACDFLVKPVSKEVIAVLWRHV 156
Query: 151 WRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSD---EQ 207
+R++ S SG + ES T E+D G QS E + SD E+
Sbjct: 157 YRKRMSK-SGLDKPGES-------GTVESDPDEYDDLGQDNLYQSNEEGSKNSSDQKGEK 208
Query: 208 SSCTKP 213
+ KP
Sbjct: 209 PATKKP 214
>gi|225465893|ref|XP_002268352.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
gi|296090344|emb|CBI40163.3| unnamed protein product [Vitis vinifera]
Length = 197
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 81/134 (60%), Gaps = 10/134 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL---KGRPRN-------IDLI 81
VL V+ + R+++ LL+ SS++VTAV G KA E L + RN ++LI
Sbjct: 9 FHVLAVDDNLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGLQEEEQRNHHPQEMEVNLI 68
Query: 82 LTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
+T+ +P ++G+ LL + E K+IPV++MSS++ S + +C+ GA D+ +KPV+ +
Sbjct: 69 ITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLS 128
Query: 142 ELRNLWQHVWRRQS 155
++ L H+ RR++
Sbjct: 129 DVSKLRPHLLRRKA 142
>gi|413954817|gb|AFW87466.1| putative two-component response regulator family protein [Zea mays]
Length = 671
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRP--RNIDLILTEVDL 87
+ LRVL V+ D +I+ L+ +Y T V D A ++L+ R DL++++V +
Sbjct: 8 VGLRVLAVDDDRVCLKILERQLKCCNYNTTVVTDAQTALDMLRERKDGNQFDLVISDVVM 67
Query: 88 PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLW 147
+ GF LL L+ + ++PVIM+S+ T+ K + GA DY+VKPVR +LR +W
Sbjct: 68 TKMDGFKLLELI---GLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRGIW 124
Query: 148 QHVWR 152
HV +
Sbjct: 125 THVVK 129
>gi|328875568|gb|EGG23932.1| cAMP phosphodiesterase [Dictyostelium fasciculatum]
Length = 851
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 68/115 (59%), Gaps = 3/115 (2%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+ +L+V+ D R+I+ + L+K Y VT V +G +AW +L DL+LT+V +P+IS
Sbjct: 181 VHILVVDDDQVQRKILESALKKFKYNVTVVTNGEEAWNILINGNTKYDLVLTDVMMPNIS 240
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVY--KCMMRGAADYLVKPVRRNELR 144
GF LL + +H KN+PVI+MS ++ Y + G D+L KP+ + L+
Sbjct: 241 GFDLLQRINDHAEIKNVPVILMSGT-AIDYKYANDTIKIGGQDFLTKPIAKELLK 294
>gi|168010903|ref|XP_001758143.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690599|gb|EDQ76965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
L+VL+V+ + IV +L+ Y VT KA +L+ DL++++V +P +
Sbjct: 3 GLKVLVVDDEPLALMIVERMLQICQYTVTTCNSATKALAMLRENRNYFDLVISDVYMPDM 62
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF LL + + ++PVIMMS +V K + GA DYL+KPVR EL N+WQHV
Sbjct: 63 DGFKLLEAI---GLELDLPVIMMSGDGETDSVMKGIRHGACDYLLKPVRLKELINIWQHV 119
Query: 151 WRR 153
R+
Sbjct: 120 VRK 122
>gi|357162610|ref|XP_003579464.1| PREDICTED: two-component response regulator ARR5-like [Brachypodium
distachyon]
Length = 163
Score = 81.6 bits (200), Expect = 9e-13, Method: Composition-based stats.
Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK-GRPRNIDLILTEVDLPSI 90
L VL V+ R ++ +LR S YRVT V +A E+L G N+++I+T+ +P +
Sbjct: 43 LHVLAVDDSVVDRAVIAKILRSSKYRVTTVESATRALELLGLGLITNVNMIITDYWMPGM 102
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
+G+ LL V E K IPV++MSS++ + + +C+ GA D+L+KPVR +++ L
Sbjct: 103 TGYELLKRVKESSELKEIPVVIMSSENVPNRINRCLEEGAEDFLLKPVRPSDVSRL 158
>gi|307110656|gb|EFN58892.1| hypothetical protein CHLNCDRAFT_140816 [Chlorella variabilis]
Length = 1229
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 16/169 (9%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK------GRPRNIDLILTEV 85
+ VL+++ + S R LL + Y G A ++L+ G P ++D+IL
Sbjct: 6 ITVLVID-NTSARASTLRLLEAAGYSTVEAQSGGSALQLLEERAAATGSP-DVDVILKNH 63
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
D P + L + EH ++IP +++S+QDS V KC+ GA D+ V+P+R NE+
Sbjct: 64 DPPGSNAVRFLHRLSEHPSLRSIPTVVVSNQDSREVVLKCLSSGAVDFWVRPLRPNEVHM 123
Query: 146 LWQHVWRRQSS--------MVSGNETQDESVGQQKIEATSENDAASNHS 186
LW VWR+Q SGN T + ++ E TS+ +A + S
Sbjct: 124 LWTRVWRQQGPGQSPCRDDSGSGNSTDAAATLLEETEPTSKEGSAPDGS 172
>gi|357144070|ref|XP_003573159.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 135
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
L VL V+ R I++ LLR S Y+VT V G +A EVL R + +I+T+ +P ++
Sbjct: 7 LHVLAVDDSLVDRAIISRLLRSSKYQVTTVDSGKRALEVLS-LEREVHMIITDYCMPEMT 65
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
G+ LL V E + IPV++MSS++S + + +C+ GA ++L+KPVR +++ L
Sbjct: 66 GYELLKRVKETAELREIPVVIMSSENSPARIRRCLEEGAEEFLIKPVRPSDVSRL 120
>gi|449445057|ref|XP_004140290.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
gi|449527697|ref|XP_004170846.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 156
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 81/145 (55%), Gaps = 20/145 (13%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL------------KGRPR--- 76
VL V+ R+++ LL+ SSY VTAV G KA E L K P
Sbjct: 10 FHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSKIAPDQNH 69
Query: 77 -----NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAA 131
+++LI+T+ +P +SG+ LL + E + K+IPV++MSS++ S + +C+ GA
Sbjct: 70 HHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAE 129
Query: 132 DYLVKPVRRNELRNLWQHVWRRQSS 156
++ +KPV+ +++R L H+ + +S+
Sbjct: 130 EFFLKPVQLSDVRKLRPHLIKEKST 154
>gi|302804879|ref|XP_002984191.1| type A response regulator [Selaginella moellendorffii]
gi|300148040|gb|EFJ14701.1| type A response regulator [Selaginella moellendorffii]
Length = 272
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK---GRPR-----NIDLILT 83
+ VL V+ R++V LL+ SSY+VT V +A EVL P I+LI+T
Sbjct: 8 IHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINAIKINLIIT 67
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL V E K IPV++MSS++ + CM GA ++++KP+R ++
Sbjct: 68 DYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERITMCMAEGAKEFILKPLRVADV 127
Query: 144 RNLWQHVWR 152
+ L H+ R
Sbjct: 128 KRLRSHIQR 136
>gi|358248966|ref|NP_001240226.1| uncharacterized protein LOC100788079 [Glycine max]
gi|255641691|gb|ACU21117.1| unknown [Glycine max]
Length = 248
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 29/156 (18%)
Query: 19 GIAKWETFLQRMALRVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGR-- 74
G+A E+ +A+ DDS R+++ LLR SSY+VT V G KA E L R
Sbjct: 2 GMAAAESQFHVLAV-------DDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLREN 54
Query: 75 -----------PRN-------IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQ 116
P N ++L++T+ +P ++G+ LL + E +NIPV++MSS+
Sbjct: 55 DESNPSIPSVCPNNHQPQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSE 114
Query: 117 DSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
+ S + +C+ GA ++ +KPVR ++L L H+ +
Sbjct: 115 NVPSRINRCLEEGAEEFFLKPVRLSDLNKLKPHMKK 150
>gi|162459124|ref|NP_001104856.1| response regulator 5 [Zea mays]
gi|12060386|dbj|BAB20580.1| response regulator 5 [Zea mays]
Length = 236
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 79/137 (57%), Gaps = 15/137 (10%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-------------N 77
R ++ DDS R+++ LL+ SSY+VT V G KA E+L R +
Sbjct: 9 RFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEID 68
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++LI+T+ +P ++G+ LL V K+IPV++MSS++ + + +C+ GA ++ +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKP 128
Query: 138 VRRNELRNLWQHVWRRQ 154
V+ +++ L H+ +R+
Sbjct: 129 VKLADMKKLKSHLLKRK 145
>gi|224136878|ref|XP_002322438.1| type-b response regulator [Populus trichocarpa]
gi|222869434|gb|EEF06565.1| type-b response regulator [Populus trichocarpa]
Length = 716
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 75/128 (58%), Gaps = 11/128 (8%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYR--------VTAVPDGLKAWEVLKGRPRNIDLI 81
+ +++L+V+ D ++ IV+A+L+ SY+ V V + A L+ + DL+
Sbjct: 16 LKIKILVVDDDSTSLSIVSAMLKTCSYKENRKLELFVVTVKNPFDALSTLRLKKGLFDLV 75
Query: 82 LTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
+T++ +P ++G L V E +PVI+MSS DS + + + GAA Y+VKP+ ++
Sbjct: 76 VTDLHMPEMNGMELQQQVDEEF---KLPVIIMSSDDSEKVILRTLEGGAAFYIVKPINKD 132
Query: 142 ELRNLWQH 149
+L+N+WQ+
Sbjct: 133 DLKNVWQY 140
>gi|226532164|ref|NP_001149868.1| RR4 - Corn type-A response regulator [Zea mays]
gi|195635163|gb|ACG37050.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 236
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 79/137 (57%), Gaps = 15/137 (10%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-------------N 77
R ++ DDS R+++ LL+ SSY+VT V G KA E+L R +
Sbjct: 9 RFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEID 68
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++LI+T+ +P ++G+ LL V K+IPV++MSS++ + + +C+ GA ++ +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKP 128
Query: 138 VRRNELRNLWQHVWRRQ 154
V+ +++ L H+ +R+
Sbjct: 129 VKLADMKKLKSHLLKRK 145
>gi|188583284|ref|YP_001926729.1| transcriptional regulator [Methylobacterium populi BJ001]
gi|418057818|ref|ZP_12695803.1| two component transcriptional regulator, winged helix family
[Methylobacterium extorquens DSM 13060]
gi|179346782|gb|ACB82194.1| two component transcriptional regulator, winged helix family
[Methylobacterium populi BJ001]
gi|373568634|gb|EHP94578.1| two component transcriptional regulator, winged helix family
[Methylobacterium extorquens DSM 13060]
Length = 253
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LL+E DD R +VT LLR+S YRVT G + W +L G +++DL+L +V LP SGF
Sbjct: 21 ILLIEDDDGMRVLVTRLLRESGYRVTGCRSGAEMWSLLPG--KSVDLVLLDVMLPGASGF 78
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
LL + +PVIM+S+++ + + GA DY+ KP R EL + V RR
Sbjct: 79 DLLRALRSK---GTVPVIMLSARNEEADRVLGLELGADDYVAKPFGRPELLARIRAVLRR 135
>gi|357149551|ref|XP_003575151.1| PREDICTED: two-component response regulator ARR3-like [Brachypodium
distachyon]
Length = 226
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 11/126 (8%)
Query: 32 LRVLLVEADDSTRQIVTALL---RKSSYRVTAVPDGLKAWEVLKGRP--------RNIDL 80
LRVL+V+ R+IV LL R S++ VT V G KA E+L +P R+ID+
Sbjct: 13 LRVLVVDDSPVDRKIVQLLLNNHRGSAFHVTVVDSGKKAMELLGQKPQAQEEQQRRSIDI 72
Query: 81 ILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRR 140
+LT+ +P ++G+ LL + IPV++MSS++ + +C+ GA D++VKP+R
Sbjct: 73 VLTDYCMPEMTGYDLLKAIKALNSPNPIPVVVMSSENEPQRINRCLTAGAEDFIVKPLRT 132
Query: 141 NELRNL 146
+++ L
Sbjct: 133 KDVQRL 138
>gi|145514151|ref|XP_001442986.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410347|emb|CAK75589.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
+ VLL E R + LL+ +Y+V A G++A + L DLIL ++ LP +
Sbjct: 13 VINVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDELLKTENEFDLILLDLGLPEM 72
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+G LL ++ + K++PVIMMS D TV C+ GA DY+VKPV +L+ L V
Sbjct: 73 TGLELLQIIKAIDKLKDVPVIMMSGDDETETVAACLNAGAEDYMVKPVNFKKLQGLQTFV 132
Query: 151 WRR 153
++
Sbjct: 133 KKK 135
>gi|218196749|gb|EEC79176.1| hypothetical protein OsI_19863 [Oryza sativa Indica Group]
Length = 385
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
Query: 69 EVLKGRPRNIDLILTEVDLPS-ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMM 127
E L P + D++LTEV P+ I GF LL ++PV++ S+ D TV KC+
Sbjct: 17 EELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTD---MDLPVVVFSADDDKRTVLKCVN 73
Query: 128 RGAADYLVKPVRRNELRNLWQHVWRRQ------SSMVSGNETQDE 166
GA DYLVKP+R EL+N+WQHV+RR+ + +GN ++ E
Sbjct: 74 SGACDYLVKPLRHEELKNIWQHVYRRKLRSGGRRAAAAGNSSKGE 118
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 104 ICKNI------PVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSM 157
ICKN+ +++ S + V V + +M GA DY+VKP+ ++ +W+HV R + S
Sbjct: 131 ICKNLVCHALTKLLVFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIKFIWKHVLRWRLSA 190
Query: 158 VSGN 161
+ N
Sbjct: 191 LPAN 194
>gi|145514664|ref|XP_001443237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410615|emb|CAK75840.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 67/122 (54%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+ VLL E R + LL+ +Y+V A G++A + L DLIL ++ LP ++
Sbjct: 14 INVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDELLKTENEFDLILLDLGLPEMT 73
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
G LL ++ + K++PVIMMS D TV C+ GA DY+VKPV +L+ L V
Sbjct: 74 GLELLQIIKAIDKLKDVPVIMMSGDDETETVAACLNAGAEDYMVKPVNFKKLQGLQTFVK 133
Query: 152 RR 153
++
Sbjct: 134 KK 135
>gi|212274883|ref|NP_001130159.1| uncharacterized protein LOC100191253 [Zea mays]
gi|194688426|gb|ACF78297.1| unknown [Zea mays]
gi|194695472|gb|ACF81820.1| unknown [Zea mays]
gi|223975127|gb|ACN31751.1| unknown [Zea mays]
Length = 242
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 79/137 (57%), Gaps = 15/137 (10%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-------------N 77
R ++ DDS R+++ LL+ SSY+VT V G KA E+L R +
Sbjct: 9 RFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEID 68
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++LI+T+ +P ++G+ LL V K+IPV++MSS++ + + +C+ GA ++ +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKP 128
Query: 138 VRRNELRNLWQHVWRRQ 154
V+ +++ L H+ +R+
Sbjct: 129 VKLADMKKLKSHLLKRK 145
>gi|255547922|ref|XP_002515018.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546069|gb|EEF47572.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 419
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 6/125 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+V+ D + +I+ +L+K SY+V A A +L+GR D+++ +V +
Sbjct: 17 GLRVLVVDNDPTWSRILEKMLKKCSYQV-ATCGSRDALNMLRGRKDEYDIVICDVTTSDM 75
Query: 91 SGFALLTLVMEHEICK-NIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL EH K + PVI S+ S + K + GA DYL+KP+R ELRN+WQH
Sbjct: 76 DGFRLL----EHIGLKMDCPVINASALXXASALQKGVRHGACDYLLKPIRMKELRNIWQH 131
Query: 150 VWRRQ 154
V+R++
Sbjct: 132 VFRKR 136
>gi|388497694|gb|AFK36913.1| unknown [Medicago truncatula]
Length = 239
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 18/141 (12%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL-------------KGRPRN- 77
VL V+ R+++ LL+ SSY+VT V G KA E L P N
Sbjct: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNTPSVFPNNH 68
Query: 78 ----IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADY 133
++L++T+ +P ++G+ LL + E +NIPV++MSS++ S + +C+ GA ++
Sbjct: 69 QEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEF 128
Query: 134 LVKPVRRNELRNLWQHVWRRQ 154
+KPVR ++L L H+ + Q
Sbjct: 129 FLKPVRLSDLNRLKPHMKKTQ 149
>gi|290973017|ref|XP_002669246.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
gi|284082791|gb|EFC36502.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
Length = 842
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
A +VL+V+ D RQ++T LL + ++V AV G +A EVL+ N L+L +V +P +
Sbjct: 89 AKKVLVVDDDRVARQVLTKLLEQLGFQVKAVEGGKQALEVLREEGNNYHLLLVDVLMPDM 148
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN----L 146
G LL + +++P+IM+SS + T+ +C GA D+L KPV+ L+
Sbjct: 149 DGLQLLK-IFRQAYSEDMPIIMVSSSEDPDTINQCFQSGAEDFLQKPVQLEILKRRVNMC 207
Query: 147 WQHVWRRQSSMVSGNETQDESVGQQKI 173
+ RR+ Q+E + ++K+
Sbjct: 208 LEDRLRRRKEKAYQEMLQNERINRKKL 234
>gi|242067106|ref|XP_002454842.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
gi|241934673|gb|EES07818.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
Length = 134
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 73/117 (62%), Gaps = 3/117 (2%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
++ DDS R +++ LLR S YRVT V G +A EVL ++ +I+T+ +P +SG+
Sbjct: 13 VLAVDDSIVDRAVISRLLRSSKYRVTTVDSGKRALEVL-SLDDSVHMIITDYCMPEMSGY 71
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
LL V E + IPV++MSS++S + + +C+ GA ++L+KPVR +++ L +
Sbjct: 72 ELLKRVKESAELREIPVVLMSSENSPTRIRRCLEEGAEEFLIKPVRASDVSRLCSRL 128
>gi|359950754|gb|AEV91167.1| MYB-related protein [Triticum aestivum]
Length = 630
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
D+I+++V +P ++GF LL LV + ++PVIMMS+ V K + GA DYL+KP
Sbjct: 9 FDVIISDVHMPDMNGFRLLELV---GLEMDLPVIMMSADSRTDLVMKGIKHGACDYLIKP 65
Query: 138 VRRNELRNLWQHVWRRQSSMVSGNETQDES 167
VR EL+N+WQHV R++ GN+ + S
Sbjct: 66 VRMEELKNIWQHVVRKK---FGGNKEHEHS 92
>gi|224713626|gb|ACN62086.1| response regulator 1 [Pinus pinea]
Length = 184
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL----KGRPRNID-----LILTE 84
VL+V+ R+++ LL+ SSYRVTAV KA + L N+D +I+T+
Sbjct: 17 VLVVDDSVLDRKLIEKLLKISSYRVTAVDRVRKALQFLGLEDDEDDLNVDNIQVNMIITD 76
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+P ++G+ LL V E K+IPV++MSS++ S + +CM GA ++L+KPV+ ++++
Sbjct: 77 YCMPGMTGYDLLRRVKESSAVKDIPVVIMSSENVESRISRCMSEGAEEFLLKPVQLSDVK 136
Query: 145 NLWQHVWRRQSS 156
L H+ + S
Sbjct: 137 KLRSHILNKGGS 148
>gi|115461262|ref|NP_001054231.1| Os04g0673300 [Oryza sativa Japonica Group]
gi|32488053|emb|CAE03227.1| OSJNBa0018M05.2 [Oryza sativa Japonica Group]
gi|70663953|emb|CAJ14992.1| OSJNBb0004A17.17 [Oryza sativa Japonica Group]
gi|71273485|emb|CAI79410.1| Type A response regulator 6 [Oryza sativa Indica Group]
gi|87116376|dbj|BAE79347.1| typeA response regulator 6 [Oryza sativa Japonica Group]
gi|113565802|dbj|BAF16145.1| Os04g0673300 [Oryza sativa Japonica Group]
gi|118790854|tpd|FAA00267.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125592032|gb|EAZ32382.1| hypothetical protein OsJ_16592 [Oryza sativa Japonica Group]
gi|215765394|dbj|BAG87091.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 170
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL-KGRPRNIDLILTEVDLPSI 90
+ VL V+ R ++ +LR S YRVT V +A E+L G N+++I+T+ +P +
Sbjct: 50 MHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCLGLVPNVNMIITDYWMPGM 109
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+G+ LL V E K IPV++MSS++ + + +C+ GA D+L+KPVR +++ L +
Sbjct: 110 TGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRPSDVSRLCSRI 169
>gi|9759533|dbj|BAB10999.1| unnamed protein product [Arabidopsis thaliana]
Length = 632
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 7/124 (5%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ + + + + LL + Y VT + KA E+L+ DL++++V++P
Sbjct: 16 VGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPD 75
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
GF LL + +E + +PVI S DS V K ++ GA DYLVKPV EL+N+W H
Sbjct: 76 TDGFKLLEIGLEMD----LPVITHSDYDS---VMKGIIHGACDYLVKPVGLKELQNIWHH 128
Query: 150 VWRR 153
V ++
Sbjct: 129 VVKK 132
>gi|325972397|ref|YP_004248588.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
gi|324027635|gb|ADY14394.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
Length = 341
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 5/215 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M ++ + D + R+I+ +LRK Y VTA +G ++L+ +IDLIL ++ +P
Sbjct: 1 MTRHIVTTDDDPAIRKILQIMLRKEGYMVTACEEGNGLLQLLRQSEESIDLILLDIKMPG 60
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
SGF LL ++ IP++M+++ + + T K M GA+DYL KPV R L +
Sbjct: 61 FSGFELLEMIRAS--YPQIPIVMITAFNDLDTGMKAMRMGASDYLAKPVHREALFATVKR 118
Query: 150 VWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIE-KGSDEQS 208
V + Q +S Q+ + T + ++ +A +++ E IE K S +
Sbjct: 119 VLDEAEKEQQLLDKQMQSQHQRALLETELKEVLTSLQDTTIATLEAFSETIEQKDSYTKG 178
Query: 209 SCTKP-DFEAESAHVEDMPDLSRQ-LWGKSLQNDV 241
C + + V +P S L G SL +D+
Sbjct: 179 HCNRVRNLSVALGRVLGLPHESLDILEGGSLLHDI 213
>gi|449434875|ref|XP_004135221.1| PREDICTED: two-component response regulator ARR3-like [Cucumis
sativus]
gi|449478516|ref|XP_004155339.1| PREDICTED: two-component response regulator ARR3-like [Cucumis
sativus]
Length = 233
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 85/151 (56%), Gaps = 19/151 (12%)
Query: 34 VLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR----------NIDLI 81
V ++ DDS R ++ LLR ++ RVTAV G++A + L + +D+I
Sbjct: 29 VHVLAVDDSLVDRTVIERLLRLTACRVTAVDSGIRALQYLGLQDETNSQVGFDGLKVDMI 88
Query: 82 LTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
+T+ +P ++G+ LL + E + IPV++MSS++ V+ + +C+ GA D++VKPV+ +
Sbjct: 89 ITDYCMPGMTGYELLKKIKESSTLREIPVVIMSSENVVARIDRCLEEGAEDFIVKPVKLS 148
Query: 142 ELRNLWQHVWRRQSSMVSGNETQDESVGQQK 172
+++ L ++ MV +T +E G K
Sbjct: 149 DVKRLREY-------MVGDEKTGNERSGINK 172
>gi|242055597|ref|XP_002456944.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
gi|241928919|gb|EES02064.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
Length = 245
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 79/142 (55%), Gaps = 20/142 (14%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-------------- 76
R ++ DDS R+++ LL+ SSY+VT V G KA E+L R
Sbjct: 9 RFHVLAVDDSIVDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDNGAEDASSPSSSSPD 68
Query: 77 ----NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAAD 132
+++LI+T+ +P ++G+ LL V K+IPV++MSS++ + + +C+ GA +
Sbjct: 69 HQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEE 128
Query: 133 YLVKPVRRNELRNLWQHVWRRQ 154
+ +KPV+ +++ L H+ +R+
Sbjct: 129 FFLKPVKLADMKKLKSHLLKRK 150
>gi|90265238|emb|CAH67773.1| H0322F07.10 [Oryza sativa Indica Group]
gi|90399191|emb|CAH68178.1| H0403D02.6 [Oryza sativa Indica Group]
gi|125550193|gb|EAY96015.1| hypothetical protein OsI_17886 [Oryza sativa Indica Group]
Length = 170
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL-KGRPRNIDLILTEVDLPSI 90
+ VL V+ R ++ +LR S YRVT V +A E+L G N+++I+T+ +P +
Sbjct: 50 MHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCLGLVPNVNMIITDYWMPGM 109
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+G+ LL V E K IPV++MSS++ + + +C+ GA D+L+KPVR +++ L +
Sbjct: 110 TGYELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRPSDVSRLCSRI 169
>gi|357126832|ref|XP_003565091.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 213
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 79/144 (54%), Gaps = 22/144 (15%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-------------- 76
R ++ DDS R+++ LL+ SSY+VT V G KA EVL R
Sbjct: 10 RFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEGDSSSASSSPSSSS 69
Query: 77 ------NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGA 130
+++LI+T+ +P ++G+ LL V K+IPV++MSS++ + + +C+ GA
Sbjct: 70 PDHQEVDVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARINRCLEDGA 129
Query: 131 ADYLVKPVRRNELRNLWQHVWRRQ 154
++ +KPV+ +++ L H+ RR+
Sbjct: 130 EEFFLKPVKLADMKKLKSHLLRRK 153
>gi|388495492|gb|AFK35812.1| unknown [Lotus japonicus]
Length = 239
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 20/151 (13%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL-------------KGRPRN--- 77
++ DDS R+++ LL+ SSY+VT V G KA E L P N
Sbjct: 12 VLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPNTPSISPNNHQE 71
Query: 78 --IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++L++T+ +P ++G+ LL + E +NIPV++MSS++ S + +C+ GA ++ +
Sbjct: 72 VEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFL 131
Query: 136 KPVRRNELRNLWQHVWRRQSSMVSGNETQDE 166
KPVR+++L L H+ + + + D+
Sbjct: 132 KPVRQSDLVRLKSHIKKTNLKKIQNQDVADK 162
>gi|326531500|dbj|BAJ97754.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 78.2 bits (191), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK-GRPRNIDLILTEVDLPSI 90
L VL V+ R ++ +LR S YRVT V +A E+L G ++++I+T+ +P +
Sbjct: 53 LHVLAVDDSVVDRAVIAKILRSSKYRVTTVDSATRALELLGLGLITDVNMIITDYWMPGM 112
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
+G+ LL V E + IPV++MSS++ + + +C+ GA D+L+KPVR +++ L
Sbjct: 113 TGYELLKRVKESSELREIPVVIMSSENVPNRITRCLEEGAEDFLLKPVRPSDVSRL 168
>gi|255540813|ref|XP_002511471.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223550586|gb|EEF52073.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 221
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 14/152 (9%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL--KGRPRNI-------DLIL 82
L VL V+ R+++ LL+ SS +VTAV G +A + L G ++ +LI+
Sbjct: 27 LHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGTRALQYLGLDGEKSSVGFNDLKVNLIM 86
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + IPV++MSS++ ++ + +C+ GA +++VKPV+ ++
Sbjct: 87 TDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILTRIDRCLEEGAEEFIVKPVKLSD 146
Query: 143 LRNLWQHVWRRQSSMVSGNETQDESVGQQKIE 174
++ L V R + G+E + S+ ++K++
Sbjct: 147 VKRLKNFVMRGE-----GDEKEKRSILKRKMD 173
>gi|302804881|ref|XP_002984192.1| type A response regulator [Selaginella moellendorffii]
gi|300148041|gb|EFJ14702.1| type A response regulator [Selaginella moellendorffii]
Length = 278
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK---GRPR-----------N 77
+ VL V+ R++V LL+ SSY+VT V +A EVL P
Sbjct: 8 IHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINVSSHLLAIK 67
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
I+LI+T+ +P ++G+ LL V E K IPV++MSS++ + CM GA ++++KP
Sbjct: 68 INLIITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERITMCMAEGAKEFILKP 127
Query: 138 VRRNELRNLWQHVWR 152
+R +++ L H+ R
Sbjct: 128 LRVADVKRLRSHIQR 142
>gi|225465885|ref|XP_002267404.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 220
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 78/135 (57%), Gaps = 18/135 (13%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL---KGRPRN------------- 77
++ DDS R+++ LL+ SSY+VTAV G KA E L + RN
Sbjct: 11 VLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGLQEAEQRNLSPPSLCPSQEME 70
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++LI+T+ +P ++G+ LL + E K+IPV++MSS++ S + +C+ GA D+ +KP
Sbjct: 71 VNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKP 130
Query: 138 VRRNELRNLWQHVWR 152
V+ +++ L H+ +
Sbjct: 131 VQLSDVNKLRPHLLK 145
>gi|255583668|ref|XP_002532588.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223527676|gb|EEF29785.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 221
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 88/161 (54%), Gaps = 24/161 (14%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL------KGRPR----------- 76
++ DDS R+++ LL+ SSY+VT V G KA + L + P
Sbjct: 11 VLAVDDSLIDRKLIEKLLKISSYQVTTVDSGSKALQFLGLHEDDRSSPEIPSVSPNSHQE 70
Query: 77 -NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++LI+T+ +P ++G+ LL + E KNIPV++MSS++ + + +C+ GA ++ +
Sbjct: 71 VEVNLIITDYCMPGMTGYDLLKKIKESSSLKNIPVVIMSSENVPARITRCLEEGAEEFFL 130
Query: 136 KPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEAT 176
KPV+ ++L L H+ + +S N+ Q++ QQ +E +
Sbjct: 131 KPVQLSDLNRLRPHMMKTKSK----NDKQEKQENQQVLEES 167
>gi|50400667|sp|Q9LZJ8.1|ARR20_ARATH RecName: Full=Putative two-component response regulator ARR20
gi|7362747|emb|CAB83117.1| putative protein [Arabidopsis thaliana]
Length = 426
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 76/133 (57%), Gaps = 6/133 (4%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
E FL + + RVLLV AD ++ + L+ + SY+VT G +A L IDL++
Sbjct: 34 EEFLTK-SNRVLLVGADSNSS--LKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIW 90
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P I+G L ++ + ++PV++MS + TV + + GA D+LVKPV + +
Sbjct: 91 DFHMPDINGLDALNIIGKQ---MDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVI 147
Query: 144 RNLWQHVWRRQSS 156
LW+HV+R++ S
Sbjct: 148 AVLWRHVYRKRMS 160
>gi|325267975|ref|ZP_08134623.1| two component response regulator [Kingella denitrificans ATCC
33394]
gi|324980578|gb|EGC16242.1| two component response regulator [Kingella denitrificans ATCC
33394]
Length = 237
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 11/223 (4%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
FL M++R+LLVE D Q V L+ ++Y V V DGL A L G +N DL+L ++
Sbjct: 7 FLGNMSMRILLVEDDGMIAQAVMMGLKHANYAVDWVQDGLAAQTALAG--QNYDLVLLDL 64
Query: 86 DLPSISGFALLTLVMEHEICKNI-PVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
LP G ++L + ++ +N+ PV+++++QD + + + GA DY+VKP EL
Sbjct: 65 GLPKQDGLSMLRHIRQN---RNLTPVLIVTAQDDLDSRLSGLDGGADDYVVKPFDMAELL 121
Query: 145 NLWQHVWRRQSSMVS-----GNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
+ V RR + G T + + Q ++ EN + SN + + S+
Sbjct: 122 ARIRAVLRRHHGQAAPLISNGVITLNPATYQVQLAGQEENISLSNKEFAILQALVSRAGT 181
Query: 200 IEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVK 242
I +D + E ES ++ + R+ GK L +++
Sbjct: 182 IHSRADLEDKIYGWGDEVESNAIDFLIHSLRKKIGKDLIKNIR 224
>gi|225465891|ref|XP_002267932.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 146
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 77/128 (60%), Gaps = 12/128 (9%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL---KGRPRN-------IDLILT 83
++ DDS R+++ LL+ SS++VTAV G KA E L + RN ++LI+T
Sbjct: 11 VLAVDDSLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGLQEEEQRNHHPQETEVNLIIT 70
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + E K+IPV++MSS++ S + +C+ GA D+ +KPV+ +++
Sbjct: 71 DYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLSDV 130
Query: 144 RNLWQHVW 151
L H+
Sbjct: 131 NKLRPHLL 138
>gi|388512609|gb|AFK44366.1| unknown [Lotus japonicus]
Length = 239
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 20/151 (13%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL-------------KGRPRN--- 77
++ DDS R+++ LL+ SSY+VT V G KA E L P N
Sbjct: 12 VLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPNTPSISPNNHQE 71
Query: 78 --IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++L++T+ +P ++G+ LL + E +NIPV+ MSS++ S + +C+ GA ++ +
Sbjct: 72 VEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVTMSSENVPSRINRCLEEGAEEFFL 131
Query: 136 KPVRRNELRNLWQHVWRRQSSMVSGNETQDE 166
KPVR+++L L H+ + + + D+
Sbjct: 132 KPVRQSDLVRLKSHIKKTNLKKIQNQDVADK 162
>gi|296090338|emb|CBI40157.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 78/135 (57%), Gaps = 18/135 (13%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL---KGRPRN------------- 77
++ DDS R+++ LL+ SSY+VTAV G KA E L + RN
Sbjct: 11 VLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGLQEAEQRNLSPPSLCPSQEME 70
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++LI+T+ +P ++G+ LL + E K+IPV++MSS++ S + +C+ GA D+ +KP
Sbjct: 71 VNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKP 130
Query: 138 VRRNELRNLWQHVWR 152
V+ +++ L H+ +
Sbjct: 131 VQLSDVNKLRPHLLK 145
>gi|260446968|emb|CBG76250.1| OO_Ba0005L10-OO_Ba0081K17.1 [Oryza officinalis]
Length = 151
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 73/118 (61%), Gaps = 3/118 (2%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL-KGRPRNIDLILTEVDLPSISG 92
++ DDS+ R ++ +LR S YRVT V +A E+L G N+++I+T+ +P ++G
Sbjct: 33 VLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCLGLVPNVNMIITDYWMPGMTG 92
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+ LL V E K IPV++MSS++ + + +C+ GA D+L+KPVR +++ L +
Sbjct: 93 YELLKRVKESSQLKEIPVVIMSSENVPNRISRCLEEGAEDFLLKPVRPSDVSRLCSRI 150
>gi|147817751|emb|CAN66659.1| hypothetical protein VITISV_031719 [Vitis vinifera]
Length = 205
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
Query: 22 KWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLI 81
K + R LR+LL + + + + V +LL++ SY+ + +A VL +ID++
Sbjct: 23 KIRALIDRSKLRILLCDTNAGSCKEVASLLKECSYQGSTG----EAIHVLSSEGPSIDIV 78
Query: 82 LTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
L E+DLP + +L + E + + IPVIM+ ++D +S + C+ GA DYL+ P+ N
Sbjct: 79 LAELDLPMANCLKMLKYITEDQELRCIPVIMLVTEDKISMIANCLRYGAVDYLLTPLGIN 138
Query: 142 ELRNLWQHV 150
EL NL H+
Sbjct: 139 ELLNLSIHM 147
>gi|168029974|ref|XP_001767499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681205|gb|EDQ67634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 75/124 (60%), Gaps = 13/124 (10%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL--------KGRP--RNIDLILT 83
++ DDS R+++ LL+ SSY+VT V L+A E L G+P R ++LI+T
Sbjct: 21 VLAVDDSIIDRKVIERLLKTSSYKVTTVNSALRALEYLGLSESCSSSGKPNVRAVNLIMT 80
Query: 84 EVDLPSISGFALLTLV-MEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
+ +P ++G+ LL +V E K +PVI+MSS++ + + C+ GA D+L+KPV+ +
Sbjct: 81 DYCMPGMTGYDLLKIVKAETSAFKELPVIVMSSENDSNRIKSCLAEGAEDFLIKPVQLED 140
Query: 143 LRNL 146
++ L
Sbjct: 141 VQRL 144
>gi|22831009|dbj|BAC15873.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273487|emb|CAI79411.1| Type A response regulator 7 [Oryza sativa Indica Group]
gi|87116384|dbj|BAE79351.1| typeA response regulator 7 [Oryza sativa Japonica Group]
gi|118790860|tpd|FAA00268.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 206
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 69/106 (65%), Gaps = 7/106 (6%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
++ DDS+ R ++TALLR+S YR + G +A E+L P N+ +I+T+ +P ++G+
Sbjct: 93 VMAVDDSSVDRAVITALLRRSKYRDS----GKRALEILGSEP-NVSMIITDYWMPEMTGY 147
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
LL + E K IPV++MSS++ + + +C+ GA D+L+KPVR
Sbjct: 148 DLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVR 193
>gi|357160996|ref|XP_003578944.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 225
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 80/149 (53%), Gaps = 15/149 (10%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR--------------- 76
VL V+ R+++ LL+ SS++VT V G KA E L +
Sbjct: 10 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGTKALEFLGIHGQDTPISLHADHLDVEV 69
Query: 77 NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
N++LI+T+ +P ++G+ LL + E ++IPV++MSS++ S + +C+ GA ++ +K
Sbjct: 70 NVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRINRCLEEGANEFFLK 129
Query: 137 PVRRNELRNLWQHVWRRQSSMVSGNETQD 165
PVR +++ L H+ + + +E +D
Sbjct: 130 PVRLSDMSKLKPHIMKSRCKEHCHHEEED 158
>gi|326518312|dbj|BAJ88185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 287
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 75/135 (55%), Gaps = 18/135 (13%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR----------------N 77
++ DDS R+++ LL+ SS++VT V G KA + L N
Sbjct: 56 VLAVDDSVLDRKLIERLLKTSSFQVTTVDSGTKALQFLGLHAEDASISSVHADQLDVEVN 115
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++LI+T+ +P ++G+ LL + E ++IPV++MSS++ S + +C+ GA ++ +KP
Sbjct: 116 VNLIITDYCMPGMTGYDLLKKIKESSSFRDIPVVIMSSENIPSRINRCLEEGANEFFLKP 175
Query: 138 VRRNELRNLWQHVWR 152
VR +++ L H+ +
Sbjct: 176 VRLSDMSKLKPHIMK 190
>gi|115442281|ref|NP_001045420.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|15528802|dbj|BAB64697.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273481|emb|CAI79408.1| Type A response regulator 4 [Oryza sativa Indica Group]
gi|87116386|dbj|BAE79352.1| typeA response regulator 4 [Oryza sativa Japonica Group]
gi|113534951|dbj|BAF07334.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|118790806|tpd|FAA00262.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125529138|gb|EAY77252.1| hypothetical protein OsI_05226 [Oryza sativa Indica Group]
gi|125573340|gb|EAZ14855.1| hypothetical protein OsJ_04783 [Oryza sativa Japonica Group]
gi|215678767|dbj|BAG95204.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 232
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 80/145 (55%), Gaps = 20/145 (13%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-------------- 76
R ++ DDS R+++ LL+ SSY+VT V G KA E+L R
Sbjct: 9 RFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSSPSSSSPD 68
Query: 77 ----NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAAD 132
+++LI+T+ +P ++G+ LL V K+IPV++MSS++ + + +C+ GA +
Sbjct: 69 HQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAEE 128
Query: 133 YLVKPVRRNELRNLWQHVWRRQSSM 157
+ +KPV+ +++ L H+ +R+ +
Sbjct: 129 FFLKPVKLADMKKLKSHLLKRKQQL 153
>gi|413956108|gb|AFW88757.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 587
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 113 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR-QSSMVSGNETQDESVGQQ 171
MS+ DS+S V+KC+ +GA D+LVKP+R+NEL+NLWQHVWRR SS S + Q + +
Sbjct: 1 MSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVWRRCHSSSGSESGIQTQKCAKL 60
Query: 172 KIEATSENDAASNH 185
EN + SNH
Sbjct: 61 NTGDEYENGSDSNH 74
>gi|356562779|ref|XP_003549646.1| PREDICTED: two-component response regulator ARR5-like isoform 1
[Glycine max]
Length = 206
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 76/130 (58%), Gaps = 9/130 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN---------IDLIL 82
L VL V+ R+++ LL+ SS +VT V G +A + L N ++LI+
Sbjct: 26 LHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLEGENGSLGFDSVKVNLIM 85
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + + IPV++MSS++ ++ + +C+ GA D+L+KPV+ ++
Sbjct: 86 TDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSD 145
Query: 143 LRNLWQHVWR 152
+R L + +
Sbjct: 146 VRRLKDFIMK 155
>gi|413956106|gb|AFW88755.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 574
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 113 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR-QSSMVSGNETQDESVGQQ 171
MS+ DS+S V+KC+ +GA D+LVKP+R+NEL+NLWQHVWRR SS S + Q + +
Sbjct: 1 MSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVWRRCHSSSGSESGIQTQKCAKL 60
Query: 172 KIEATSENDAASNH 185
EN + SNH
Sbjct: 61 NTGDEYENGSDSNH 74
>gi|356540587|ref|XP_003538769.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 570
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
W+ F + LRVLL+E D S+ + L Y+V+ D +A L P+ + +
Sbjct: 11 WKDFPK--GLRVLLLEGDSSSAAEIREQLEAMDYKVSTFYDENEALSALSSSPKGFHVAI 68
Query: 83 TEVDLP-SISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
EV S+ GF L E K++P IM S ++T+ KC+ GA ++L KP+ +
Sbjct: 69 VEVSTSCSLGGFKFL------ENAKDLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSED 122
Query: 142 ELRNLWQHV 150
+L+N+WQHV
Sbjct: 123 KLKNIWQHV 131
>gi|224086847|ref|XP_002307983.1| type-a response regulator [Populus trichocarpa]
gi|222853959|gb|EEE91506.1| type-a response regulator [Populus trichocarpa]
Length = 233
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 29/161 (18%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL--------------------KG 73
++ DDS R+++ LL+ SSY+VTAV G KA + L
Sbjct: 13 VLAVDDSMIDRKLIERLLKTSSYQVTAVDSGSKALKFLGLHEEDDHSNPDTVPSVSPNDH 72
Query: 74 RPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADY 133
R ++LI+T+ +P ++G+ LL V E ++IPV++MSS++ S + +C+ GA ++
Sbjct: 73 REVEVNLIITDYCMPGMTGYDLLKKVKESSSLRDIPVVIMSSENVPSRITRCLEEGAEEF 132
Query: 134 LVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIE 174
+KPVR +L L H+ + + NE Q++ Q+K+E
Sbjct: 133 FLKPVRLADLNRLKPHMMKTKIK----NEKQED---QEKLE 166
>gi|359828772|gb|AEV76988.1| type A response regulator 4, partial [Triticum aestivum]
Length = 203
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 78/143 (54%), Gaps = 21/143 (14%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN------------- 77
R ++ DDS R+++ LL+ SSY+VT V G KA EVL R
Sbjct: 9 RFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGFRDEGDDSSSPPSSSAPD 68
Query: 78 ------IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAA 131
++LI+T+ +P ++G+ LL V K+IPV++MSS++ + + +C+ GA
Sbjct: 69 HHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAE 128
Query: 132 DYLVKPVRRNELRNLWQHVWRRQ 154
++ +KPV+ +++ L H+ RR+
Sbjct: 129 EFFLKPVKLADMKKLKSHLVRRK 151
>gi|147798455|emb|CAN72192.1| hypothetical protein VITISV_005693 [Vitis vinifera]
Length = 790
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
E F + VL+V+ D + IV+ +LR +Y V V + A + +DL++T
Sbjct: 513 EEFKGHRDICVLVVDCDPTCLMIVSGMLRALTYEVLTVDRAVDALAMTLEGGCGVDLVMT 572
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
E+ +P + G LL E +PV++MS+ + + K + RGA YLVKPV ++
Sbjct: 573 ELHMPDMYGLDLLD---EIRRTSKLPVVIMSADSNEDVMLKSLRRGAEYYLVKPVLMEDV 629
Query: 144 RNLWQHVWRRQSSMVS 159
N WQ+V++R+ +S
Sbjct: 630 TNFWQYVFKRRRQKLS 645
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ D ++ ++ +LR +Y+V V A ++ R +DL++TE+ +P + G
Sbjct: 23 VLVVDCDPTSLMTISGMLRALTYQVVTVERVTDALAMILERKDEVDLVMTELHMPDMDGL 82
Query: 94 ALLTLVMEHEICKNIPVI------------MMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
LL E + +PV+ +MS+ + + + +GA Y+ KPV
Sbjct: 83 QLLD---EIQKTSKLPVVNFFFFLDGNGNPVMSADAEEDAMLRSLNKGATYYMXKPVEMG 139
Query: 142 ELRNLWQHVW--RRQSSMVSGNE---TQDESVGQQKIEATSENDAASNHSSGY 189
++NLWQ+V+ RR + + Q ES+G+ + + + + SN GY
Sbjct: 140 SIKNLWQYVFLNRRDKQLQKTGQKGGVQVESLGENESDVDAGSALISNGKHGY 192
>gi|413919924|gb|AFW59856.1| cytokinin response regulator2 [Zea mays]
Length = 159
Score = 77.0 bits (188), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK-GRPRNIDLILTEVDLPSISG 92
VL V+ R ++ +LR S YRVT V +A E+L G ++++I+T+ +P ++G
Sbjct: 41 VLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLALGLVPDVNMIITDYWMPGMTG 100
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
+ LL V E + IPV++MSS++ + + +C+ GA D+L+KPVR ++ L
Sbjct: 101 YELLKHVKESSALRAIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADVSRL 154
>gi|443479084|ref|ZP_21068741.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena biceps PCC 7429]
gi|443015499|gb|ELS30421.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena biceps PCC 7429]
Length = 336
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 84/155 (54%), Gaps = 11/155 (7%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSY-RVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
++L+++ + R+I+ LR Y +T G K E++ +P +DLIL ++ +P ++
Sbjct: 8 KLLIIDDEQMNREILYRHLRNLGYPNITMAESGKKGLEIVANQP--VDLILLDMMMPMLN 65
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
G +LT + E+ + IPVI++S+ D + C+ +GA DYL+KP R LR
Sbjct: 66 GLEVLTYLKENPEWRVIPVIIISALDEKEMMLACIQKGAEDYLIKPYDRVLLRA------ 119
Query: 152 RRQSSMVSGNETQD-ESVGQQKIEATSENDAASNH 185
R S+ + D E + +QK+EA + AA+ H
Sbjct: 120 -RVSACIEKKTLHDREVLNKQKLEAAYQELAAAYH 153
>gi|359807137|ref|NP_001241095.1| uncharacterized protein LOC100814494 [Glycine max]
gi|255647755|gb|ACU24338.1| unknown [Glycine max]
Length = 244
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 20/137 (14%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL------KGRPRN---------- 77
++ DDS R+++ LLR SSY VT V G KA E L + P
Sbjct: 9 VLAVDDSLIDRKLIERLLRTSSYEVTTVDSGSKALEFLGLCENDESNPSTPYVCPNNHQE 68
Query: 78 --IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++L++T+ +P ++G+ LL + E +NIPV++MSS++ S + +C+ GA ++ +
Sbjct: 69 VEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFL 128
Query: 136 KPVRRNELRNLWQHVWR 152
KPVR ++L L H+ +
Sbjct: 129 KPVRLSDLNKLKPHMKK 145
>gi|413956107|gb|AFW88756.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 603
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 113 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR-QSSMVSGNETQDESVGQQ 171
MS+ DS+S V+KC+ +GA D+LVKP+R+NEL+NLWQHVWRR SS S + Q + +
Sbjct: 1 MSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVWRRCHSSSGSESGIQTQKCAKL 60
Query: 172 KIEATSENDAASNH 185
EN + SNH
Sbjct: 61 NTGDEYENGSDSNH 74
>gi|357477303|ref|XP_003608937.1| Two-component response regulator ARR5 [Medicago truncatula]
gi|355509992|gb|AES91134.1| Two-component response regulator ARR5 [Medicago truncatula]
Length = 214
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN---------IDLIL 82
L VL V+ R+++ LL+ SS +VT V +A + L N ++LI+
Sbjct: 26 LHVLAVDDSLVDRKVIERLLKISSCKVTVVESARRALQFLGLDGENSDVAFDAVKVNLIM 85
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + + IPV++MSS++ ++ + +C+ GA D+L+KPV+ ++
Sbjct: 86 TDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSD 145
Query: 143 LRNLWQHVWR 152
+R L + R
Sbjct: 146 VRRLKDFIMR 155
>gi|224075846|ref|XP_002304794.1| type-a response regulator [Populus trichocarpa]
gi|224075848|ref|XP_002304795.1| hypothetical protein POPTRDRAFT_693167 [Populus trichocarpa]
gi|222842226|gb|EEE79773.1| type-a response regulator [Populus trichocarpa]
gi|222842227|gb|EEE79774.1| hypothetical protein POPTRDRAFT_693167 [Populus trichocarpa]
Length = 193
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 20/153 (13%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL------KG 73
+A T VL V+ R+++ LL+ SSY+VTAV G KA E L +
Sbjct: 1 MATLATLATETQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLSGDDEQ 60
Query: 74 RPRN--------------IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSV 119
R N I++I+T+ +P ++G+ LL + E + K+IPV++MSS++
Sbjct: 61 RDSNPSSVSPDHHHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVP 120
Query: 120 STVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
S + +C+ GA ++ +KPV+ +++ L H+ +
Sbjct: 121 SRINRCLEEGAEEFFLKPVQLSDVNKLRPHLMK 153
>gi|281209703|gb|EFA83871.1| cAMP phosphodiesterase [Polysphondylium pallidum PN500]
Length = 665
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+ +L+V+ D R ++ +L+K ++ VT V +G +AW+ L DL+LT+V +P ++
Sbjct: 168 VHILVVDDDIVQRSLLNNMLKKFNFNVTLVTNGEEAWDTLLNGKVMYDLVLTDVMMPMVT 227
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVY--KCMMRGAADYLVKPVRRNELR----- 144
GF LL + EH K+IPVI+MS +V Y + G D+L KP+ + L+
Sbjct: 228 GFDLLQRINEHIEIKHIPVILMSGT-AVDYKYANDTIKIGGQDFLTKPIAKELLKKKIDT 286
Query: 145 ---NLWQHVWRRQSSMVSGNETQDESVGQQKIEA 175
++WQ + E ++ S+ +++EA
Sbjct: 287 VLTSIWQKKKEAEYKSFLARERENRSILAKQMEA 320
>gi|147765741|emb|CAN73375.1| hypothetical protein VITISV_019100 [Vitis vinifera]
Length = 659
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 46 IVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEIC 105
IV +LR Y+V V + L A L+ L++T+V +P + GF V E
Sbjct: 36 IVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEE--- 92
Query: 106 KNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+PV+MMS+ D S++ K + GAA Y+VKPV ++L+N+WQ+
Sbjct: 93 FQLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQY 136
>gi|109631202|gb|ABG35777.1| SRR217 [Striga asiatica]
Length = 220
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 17/138 (12%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK------------GRPRN-- 77
VL V+ R+++ LL+ SSY+VT V G KA E L P+N
Sbjct: 10 FHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGNKALEFLGWSKDESGNSNAFDSPKNHQ 69
Query: 78 ---IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYL 134
++L++T+ +P ++G+ LL V E ++IPV++MSS++ S + +C+ GA ++
Sbjct: 70 VVEVNLVITDYCMPGMTGYELLKKVKESTFLRDIPVVIMSSENVPSRINRCLEEGAEEFF 129
Query: 135 VKPVRRNELRNLWQHVWR 152
+KPVR +++ L H+ +
Sbjct: 130 LKPVRLSDVNKLRPHMMK 147
>gi|255539557|ref|XP_002510843.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223549958|gb|EEF51445.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 754
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +++L+V+ D T IV+++L+ S +V V + L A L+ DL++T++ +P
Sbjct: 19 LTVQILIVDDDAPTLGIVSSMLKTCSLQVVTVKNPLDALSSLQSSDGAFDLVITDLHMPG 78
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
++G L + E IPV++MSS S + + + GA Y+VKPV +L+N+WQ+
Sbjct: 79 MNGIQLQKQIDEE---FKIPVVIMSSDGKRSAILESLESGAVYYMVKPVNLRDLKNVWQY 135
Query: 150 V 150
Sbjct: 136 A 136
>gi|297733947|emb|CBI15194.3| unnamed protein product [Vitis vinifera]
Length = 159
Score = 76.6 bits (187), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 22 KWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLI 81
K + R LR+LL + + + + V +LL++ SY+ + +A VL +ID++
Sbjct: 23 KIRALIDRSKLRILLCDTNAGSCKEVASLLKECSYQGSTG----EAIHVLSSEGPSIDIV 78
Query: 82 LTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
L E+DLP + +L + E + + IPVIM+ ++D +S + C+ GA DYL+ P+ N
Sbjct: 79 LAELDLPMANCLKMLKYITEDQELRCIPVIMLVTEDKISMIANCLRYGAVDYLLTPLGIN 138
Query: 142 ELRNLWQHVWRRQSSMVSGNE 162
EL NL H+ + + S E
Sbjct: 139 ELLNLSIHMESKAHAPTSREE 159
>gi|33330868|gb|AAQ10677.1| type-A response regulator [Catharanthus roseus]
Length = 188
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 79/137 (57%), Gaps = 20/137 (14%)
Query: 30 MALRVL-----LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL----------- 71
MA +VL ++ DDS R+++ LL+ S+Y+VT V G+KA E L
Sbjct: 1 MAAQVLDVGFHVLAVDDSLVDRKLIERLLKTSAYQVTVVDSGIKALEFLGLLDEEKEISG 60
Query: 72 --KGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRG 129
+ ++LI+T+ +P ++G+ LL V E K+IPV++MSS++ S + +C+ G
Sbjct: 61 SNHQQVVEVNLIITDYSMPGMTGYDLLRKVKESSYLKDIPVVIMSSENIPSRINRCLEEG 120
Query: 130 AADYLVKPVRRNELRNL 146
A D+ +KPV+++++ L
Sbjct: 121 ADDFFLKPVKQSDVNKL 137
>gi|309951236|emb|CBX43988.1| putative A-type response regulator 6 [Populus x canadensis]
Length = 230
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 29/161 (18%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL--------------------KG 73
++ DDS R+++ LL+ SSY+VTAV G KA + L
Sbjct: 13 VLAVDDSMIDRKLIERLLKTSSYQVTAVDSGSKALKFLGLHEEDDQSNPDTVPSVCPNDH 72
Query: 74 RPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADY 133
R ++LI+T+ +P ++G+ LL V E ++IPV++MSS++ S + +C+ GA ++
Sbjct: 73 REVEVNLIITDYCMPGMTGYDLLKKVKESSSLRDIPVVIMSSENVPSRITRCLEEGAEEF 132
Query: 134 LVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIE 174
+KPVR +L L H+ + + NE Q++ Q+K+E
Sbjct: 133 FLKPVRLADLNRLKPHMMKTKIK----NEKQED---QEKLE 166
>gi|309951238|emb|CBX43989.1| putative A-type response regulator 7 [Populus x canadensis]
Length = 227
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 20/137 (14%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGR-------------PRN--- 77
++ DDS R+++ LL+ SSY+VT V G KA + L + P N
Sbjct: 13 VLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGLQEDEQSNPDTPFVSPNNHQE 72
Query: 78 --IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++LI+T+ +P ++G+ LL V E +NIPV++MSS++ S + +C+ GA ++ +
Sbjct: 73 VEVNLIITDYCMPGMTGYDLLKKVKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFL 132
Query: 136 KPVRRNELRNLWQHVWR 152
KPVR ++L L H+ +
Sbjct: 133 KPVRLSDLNRLKPHMMK 149
>gi|162458152|ref|NP_001104849.1| cytokinin response regulator2 [Zea mays]
gi|5689236|dbj|BAA82873.1| ZmRR2 [Zea mays]
gi|6009897|dbj|BAA85113.1| response regulator 2 [Zea mays]
Length = 157
Score = 76.6 bits (187), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK-GRPRNIDLILTEVDLPSISG 92
VL V+ R ++ +LR S YRVT V +A E+L G ++++I+T+ +P ++G
Sbjct: 39 VLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLALGLVPDVNMIITDYWMPGMTG 98
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
+ LL V E + IPV++MSS++ + + +C+ GA D+L+KPVR ++ L
Sbjct: 99 YELLKHVKESSALRAIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADVSRL 152
>gi|224137712|ref|XP_002322625.1| type-a response regulator [Populus trichocarpa]
gi|222867255|gb|EEF04386.1| type-a response regulator [Populus trichocarpa]
Length = 227
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 20/137 (14%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGR-------------PRN--- 77
++ DDS R+++ LL+ SSY+VT V G KA + L + P N
Sbjct: 13 VLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGLQEDEQSNPDTPYVSPNNHQE 72
Query: 78 --IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++LI+T+ +P ++G+ LL V E +NIPV++MSS++ S + +C+ GA ++ +
Sbjct: 73 MEVNLIITDYCMPGMTGYDLLKKVKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFL 132
Query: 136 KPVRRNELRNLWQHVWR 152
KPVR ++L L H+ +
Sbjct: 133 KPVRLSDLNRLKPHMMK 149
>gi|255558348|ref|XP_002520201.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223540693|gb|EEF42256.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 258
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 81/136 (59%), Gaps = 10/136 (7%)
Query: 34 VLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL--------KGRPRNIDLILT 83
V ++ DDS R+++ LL+ +S +VTAV G +A + L + +DLI+T
Sbjct: 29 VHVLAVDDSLVDRKVIERLLKITSCKVTAVDSGRRALQFLGLDEEKSTSIQGLKVDLIIT 88
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + E + IPV++MSS++ ++ + +C+ GA D+LVKPV+ +++
Sbjct: 89 DYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVMARIDRCLEEGAEDFLVKPVKLSDV 148
Query: 144 RNLWQHVWRRQSSMVS 159
+ + ++ R+ + S
Sbjct: 149 KRIRDYMTARELKLKS 164
>gi|255564944|ref|XP_002523465.1| receptor histidine kinase, putative [Ricinus communis]
gi|223537293|gb|EEF38924.1| receptor histidine kinase, putative [Ricinus communis]
Length = 185
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 75/128 (58%), Gaps = 10/128 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL----------KGRPRNIDLI 81
+ VL V+ R+IV LL+ +S++VT+V +G KA E+L + ID+I
Sbjct: 19 IHVLAVDDCFLDRKIVEKLLKNASFKVTSVDNGKKAMEILGLSQDKVDKSTYNDQKIDII 78
Query: 82 LTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
LT+ +P ++G+ LL V H K+IPV+++SS+ + +C+ GA D+L KP+++
Sbjct: 79 LTDYCMPEMNGYDLLMAVKGHSNVKSIPVVIISSEYDPQRISRCLANGAEDFLQKPLQQK 138
Query: 142 ELRNLWQH 149
+L+ L +
Sbjct: 139 DLQKLRSY 146
>gi|225441254|ref|XP_002273990.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 218
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 19/138 (13%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN---------------- 77
++ DDS R+++ LL+ SSY+VT V G KA E L G N
Sbjct: 11 VLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFL-GLHENDPNTPSVSPNSHQEVE 69
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++LI+T+ +P ++G+ LL + E +NIPV++MSS++ S + +C+ GA ++ +KP
Sbjct: 70 VNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKP 129
Query: 138 VRRNELRNLWQHVWRRQS 155
V+ +++ L H+ + +S
Sbjct: 130 VQISDVNRLKPHMMKAKS 147
>gi|297741112|emb|CBI31843.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 46 IVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEIC 105
IV +LR Y+V V + L A L+ L++T+V +P + GF V E
Sbjct: 36 IVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEE--- 92
Query: 106 KNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+PV+MMS+ D S++ K + GAA Y+VKPV ++L+N+WQ+
Sbjct: 93 FQLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQY 136
>gi|357633416|ref|ZP_09131294.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
gi|386391833|ref|ZP_10076614.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfovibrio sp. U5L]
gi|357581970|gb|EHJ47303.1| response regulator receiver protein [Desulfovibrio sp. FW1012B]
gi|385732711|gb|EIG52909.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfovibrio sp. U5L]
Length = 122
Score = 76.3 bits (186), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M +L+V+ + R +V ++RK ++VTA DGL E L P+ +DLI+T++++P
Sbjct: 1 MPKHILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKLYTDPQ-VDLIITDINMPR 59
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+ G + V E E+ ++IP++++S++ ++ + GA Y+VKP +
Sbjct: 60 MDGITFIKTVREQEVYRDIPIVVLSTEGEERDIHAGLSIGANLYMVKPAQ 109
>gi|109631210|gb|ABG35781.1| SRR197 [Striga asiatica]
Length = 211
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 74/124 (59%), Gaps = 10/124 (8%)
Query: 39 ADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLK---GRPRN-----IDLILTEVDLP 88
DDS R+++ LL+ SSY+VT V G KA E L P+N ++L++T+ +P
Sbjct: 15 VDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGESCDSPKNQQEIEVNLVITDYCMP 74
Query: 89 SISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
++G+ LL + E ++IPV+++SS++ S + +C+ G ++ +KPVR +++ L
Sbjct: 75 GMTGYDLLKKMKESSFLRDIPVVILSSENVPSRINRCLEEGTEEFFLKPVRLSDVNKLRP 134
Query: 149 HVWR 152
H+ +
Sbjct: 135 HMMK 138
>gi|158521104|ref|YP_001528974.1| response regulator receiver protein [Desulfococcus oleovorans Hxd3]
gi|158509930|gb|ABW66897.1| response regulator receiver protein [Desulfococcus oleovorans Hxd3]
Length = 846
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
A VLLVE D TR ++T L Y VTA DG+ A L G+ ++ DLIL+++D+P++
Sbjct: 724 AASVLLVEDDADTRMLITRFLETDGYTVTACADGIDALLCL-GK-QSFDLILSDIDMPNL 781
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
GF LL ++ + + ++PVI ++S+ + + GA DY+ KPV+++ LR
Sbjct: 782 DGFKLLEMINQKGV--SVPVIFLTSRAGHEDETRGLELGAVDYIKKPVQKDLLR 833
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R++ ++ D + +V L + V +G ++ P DL+L ++++P + G
Sbjct: 9 RIVYIDDDRNQLALVERFL-SGPFEVITAENGEDGLRIISETPP--DLVLLDINMPKMDG 65
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ + T + IPV+ +++ + + GA+D+LVKPV+++ L
Sbjct: 66 YEVCTRLQATPKTSFIPVVFLTAMEEEKDRARAFAAGASDFLVKPVKKDAL 116
>gi|296090342|emb|CBI40161.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 81/142 (57%), Gaps = 10/142 (7%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL---KGRPR 76
+A ++ + R + LL + +++ LL+ SS++VTAV G KA E L + R
Sbjct: 12 LAVDDSLIDRKLIEKLLKTSSFQDSKLIEKLLKTSSFQVTAVDSGSKALEFLGLQEEEQR 71
Query: 77 N-------IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRG 129
N ++LI+T+ +P ++G+ LL + E K+IPV++MSS++ S + +C+ G
Sbjct: 72 NHHPQETEVNLIITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEG 131
Query: 130 AADYLVKPVRRNELRNLWQHVW 151
A D+ +KPV+ +++ L H+
Sbjct: 132 AEDFFLKPVQLSDVNKLRPHLL 153
>gi|51948340|gb|AAU14274.1| APRR-like protein [Ostreococcus tauri]
Length = 580
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 17/134 (12%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR---------NIDLI 81
ALRVLL D TR +V +LR+ V +G + EVL+GRP+ ++D+I
Sbjct: 55 ALRVLLATDDAHTRGMVHKMLRELGVEVVMATNGKEVLEVLRGRPKGVAAAAEDVSVDMI 114
Query: 82 LTEVDLPSISG-FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMR----GAADYLVK 136
L +V +P++ G L+ + +E + +P+++MS+ D C R GAA +L K
Sbjct: 115 LLDVLMPALDGEVELVEVCKSNEALRGVPIVIMSTVDERKA---CGTRYEHSGAAGFLTK 171
Query: 137 PVRRNELRNLWQHV 150
PV R EL+ H
Sbjct: 172 PVNRTELKESLSHT 185
>gi|397691109|ref|YP_006528363.1| response regulator receiver protein [Melioribacter roseus P3M]
gi|395812601|gb|AFN75350.1| response regulator receiver protein [Melioribacter roseus P3M]
Length = 121
Score = 75.9 bits (185), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 33 RVLLVEADDST-RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
RV+LV D T R+ V+ L Y + A DG++A E L G IDL++T++++P+I
Sbjct: 3 RVILVADDSPTIRKFVSVALSTKGYEIIACADGMEALEKLPGN--KIDLLITDLNMPNID 60
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
GF L+ + E+E K +P+I++SS S +++ + GA YL+KP
Sbjct: 61 GFQLIKSIRENEEYKELPIIVLSSLGSSEDIHRGLEYGANSYLIKP 106
>gi|440801589|gb|ELR22603.1| Multisensor hybrid histidine kinase, putative [Acanthamoeba
castellanii str. Neff]
Length = 1735
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+LL + + R+ V LL + Y V +V +GL+A VL+ P+ +DL+LT+V +P + G
Sbjct: 854 RILLADDNFDMREYVARLL-SAKYEVISVSNGLEAASVLRSNPQGVDLVLTDVMMPFLDG 912
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
F LL + + + +PVIM+S++ + + GA DYL KP EL
Sbjct: 913 FGLLKEIRSRDATQTLPVIMLSARAGEEASAEGLAEGADDYLTKPFTAREL 963
>gi|370988689|dbj|BAL43558.1| type-A response regulator [Petunia x hybrida]
Length = 158
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 75/123 (60%), Gaps = 10/123 (8%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL----------KGRPRNIDLILT 83
VL V+ + R++V LL+KSS +VT +GL+A E L G +++I+T
Sbjct: 25 VLAVDDNLVDRKLVERLLKKSSCKVTTAENGLRALEYLGLGGDQEHSTNGNGSKVNMIIT 84
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + E I K++PV++MSS++ + + +CM GA +++KP++ +++
Sbjct: 85 DYCMPGMTGYELLKKIKESSILKDVPVVIMSSENIPTRIDQCMEEGAQMFMLKPLKHSDV 144
Query: 144 RNL 146
+ L
Sbjct: 145 KRL 147
>gi|356573692|ref|XP_003554991.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 315
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAV---PDGLKAWEVLKGRPRNIDLILT 83
Q L V+ V+ D + +I+ + K YRV PD L VL+ + R ID+IL
Sbjct: 9 FQFEGLWVVAVDDDTTILEIIKQMGFKCHYRVATFSDAPDALNY--VLENKDR-IDVILV 65
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+V LP++ G+ L + EI +IPVI+MS S S V K + GA DY KP N+
Sbjct: 66 DVHLPNMDGYEFLKHI-NKEI--DIPVIIMSVDGSTSAVRKAITHGACDYWTKPFSENQF 122
Query: 144 RNLWQHV 150
+ +W+HV
Sbjct: 123 KIMWKHV 129
>gi|300710684|ref|YP_003736498.1| response regulator receiver protein [Halalkalicoccus jeotgali B3]
gi|448295010|ref|ZP_21485084.1| response regulator receiver protein [Halalkalicoccus jeotgali B3]
gi|299124367|gb|ADJ14706.1| response regulator receiver protein [Halalkalicoccus jeotgali B3]
gi|445585202|gb|ELY39502.1| response regulator receiver protein [Halalkalicoccus jeotgali B3]
Length = 122
Score = 75.5 bits (184), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 64/114 (56%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M V +V+ + R++V+ L + Y V PDG W+ L+G D++L +V +P+
Sbjct: 1 MNTDVFVVDDEPELRELVSFHLETAGYDVATYPDGEACWQQLQGTDSPPDVLLVDVMMPN 60
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
++GF LL V + E +PVIM++++ + + V + GA DYL KP R EL
Sbjct: 61 MNGFQLLKAVRDGEGLSELPVIMLTARGTETDVVQGFDIGATDYLTKPFRSQEL 114
>gi|428212579|ref|YP_007085723.1| family 3 adenylate cyclase [Oscillatoria acuminata PCC 6304]
gi|428000960|gb|AFY81803.1| family 3 adenylate cyclase [Oscillatoria acuminata PCC 6304]
Length = 354
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ ++ R ++ L++ Y V DGLKA E+++ P DL+L ++ +P ++G+
Sbjct: 8 VLVVDDVEANRDLLCRRLKRQGYHVKIAEDGLKALELIRAEP--FDLVLLDIMMPHLNGY 65
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
+L + ++IPVIM+S+ D + +V KC+ GA DYL KP
Sbjct: 66 QVLEEIKADSSLRHIPVIMISAVDDIDSVVKCIELGAEDYLSKP 109
>gi|309951232|emb|CBX43986.1| putative A-type response regulator 4 [Populus x canadensis]
Length = 193
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 78/141 (55%), Gaps = 20/141 (14%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL------KGRPRN-------- 77
VL V+ R+++ LL+ SSY+VTAV G KA E L + R N
Sbjct: 13 FHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLHGDDEQRDSNPSSVSPDH 72
Query: 78 ------IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAA 131
I++I+T+ +P ++G+ LL + E + K+IPV++MSS++ S + +C+ GA
Sbjct: 73 HHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLEEGAE 132
Query: 132 DYLVKPVRRNELRNLWQHVWR 152
++ +KPV+ +++ L H+ +
Sbjct: 133 EFFLKPVQLSDVNKLRPHLMK 153
>gi|167749920|ref|ZP_02422047.1| hypothetical protein EUBSIR_00888 [Eubacterium siraeum DSM 15702]
gi|167657087|gb|EDS01217.1| diguanylate cyclase (GGDEF) domain protein [Eubacterium siraeum DSM
15702]
Length = 818
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+L+V+ + R +++ +L Y + DG +A +LK R +IDL+L ++ +P++ G
Sbjct: 25 RILIVDDSEMNRDMLSDML-SDDYDIVEAADGEEALSILKERVYDIDLVLLDIIMPAVDG 83
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP----VRRNELRNLWQ 148
F +L ++ + N PVIM+SS+ S S + K G DY+++P + + N
Sbjct: 84 FGVLDVMKRYHWIDNTPVIMISSETSQSYIRKAFELGVTDYIIRPFDSFIIHKRVSNTLM 143
Query: 149 HVWRRQSSMVSGNETQ 164
++R+Q ++S E Q
Sbjct: 144 -LYRKQKKLLSALEEQ 158
>gi|15221927|ref|NP_173339.1| two-component response regulator ARR7 [Arabidopsis thaliana]
gi|51316125|sp|Q9ZWS7.1|ARR7_ARATH RecName: Full=Two-component response regulator ARR7
gi|8778291|gb|AAF79300.1|AC068602_23 F14D16.20 [Arabidopsis thaliana]
gi|3953603|dbj|BAA34729.1| response regulator 7 [Arabidopsis thaliana]
gi|88193788|gb|ABD42983.1| At1g19050 [Arabidopsis thaliana]
gi|332191674|gb|AEE29795.1| two-component response regulator ARR7 [Arabidopsis thaliana]
Length = 206
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL-----KG----RPRNIDLIL 82
L VL V+ R+++ LLR SS +VT V G +A + L KG + ++LI+
Sbjct: 24 LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLIV 83
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P +SG+ LL + E + +PV++MSS++ + + +C+ GA ++L+KPV+ +
Sbjct: 84 TDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLAD 143
Query: 143 LRNLWQHVWRRQS 155
++ + Q + R ++
Sbjct: 144 VKRIKQLIMRNEA 156
>gi|225457164|ref|XP_002283787.1| PREDICTED: two-component response regulator ARR5-like [Vitis
vinifera]
Length = 222
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 77/130 (59%), Gaps = 9/130 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL--KGRPRNI-------DLIL 82
L VL V+ R+++ LL+ SS +VTAV G +A + L G ++ +LI+
Sbjct: 29 LHVLAVDDSHVDRKVIERLLKISSCKVTAVESGTRALQFLGLDGEENSVGFDGLKVNLIM 88
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + + IPV++MSS++ ++ + +C+ GA +++VKPV+ +
Sbjct: 89 TDYSMPGMTGYELLKKIKESKAFRKIPVVIMSSENILTRIDRCLEEGAEEFIVKPVKLAD 148
Query: 143 LRNLWQHVWR 152
+R L + R
Sbjct: 149 VRRLRDFIMR 158
>gi|218529080|ref|YP_002419896.1| transcriptional regulator [Methylobacterium extorquens CM4]
gi|240141918|ref|YP_002966426.1| DNA-binding response regulator in two-component regulatory system
[Methylobacterium extorquens AM1]
gi|218521383|gb|ACK81968.1| two component transcriptional regulator, winged helix family
[Methylobacterium extorquens CM4]
gi|240011860|gb|ACS43085.1| DNA-binding response regulator in two-component regulatory system
[Methylobacterium extorquens AM1]
Length = 244
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRP-RNIDLILTEVDLPSISG 92
VLLVE DD R +VT +LR+S YRVT G W + +P +DL+L +V LP +SG
Sbjct: 12 VLLVEDDDGIRALVTRILRESGYRVTGCRSGADMWSL---QPDLAVDLVLLDVMLPGVSG 68
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
F LL + +PVIM+S+++ + + GA DY+ KP R EL + V R
Sbjct: 69 FDLLRALRAK---GTVPVIMLSARNEEADRVLGLELGADDYVAKPFGRPELLARIRAVLR 125
Query: 153 RQS 155
R S
Sbjct: 126 RAS 128
>gi|297837533|ref|XP_002886648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332489|gb|EFH62907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 79/140 (56%), Gaps = 11/140 (7%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN---------IDLILTE 84
++ DDS R ++ LLR +S +VTAV G +A E L + +DLI+T+
Sbjct: 35 VLAVDDSLLDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDKKAAVEFDRLKVDLIITD 94
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+P ++G+ LL + E K +PV++MSS++ ++ + +C+ GA D+L+KPV+ +++
Sbjct: 95 YCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVITRIDRCLEEGAEDFLLKPVKLADVK 154
Query: 145 NLWQHVWRRQSSMVSGNETQ 164
L ++ + GN+ +
Sbjct: 155 RLRNYLTKDVKVAADGNKRK 174
>gi|254559730|ref|YP_003066825.1| DNA-binding response regulator in two-component regulatory system
with ArcB or CpxA [Methylobacterium extorquens DM4]
gi|418057727|ref|ZP_12695713.1| two component transcriptional regulator, winged helix family
[Methylobacterium extorquens DSM 13060]
gi|254267008|emb|CAX22812.1| putative DNA-binding response regulator in two-component regulatory
system with ArcB or CpxA (putative arcA=cpxC, dye, fexA,
msp) [Methylobacterium extorquens DM4]
gi|373568680|gb|EHP94623.1| two component transcriptional regulator, winged helix family
[Methylobacterium extorquens DSM 13060]
Length = 244
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRP-RNIDLILTEVDLPSISG 92
VLLVE DD R +VT +LR+S YRVT G W + +P +DL+L +V LP +SG
Sbjct: 12 VLLVEDDDGIRALVTRILRESGYRVTGCRSGADMWSL---QPDLAVDLVLLDVMLPGVSG 68
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
F LL + +PVIM+S+++ + + GA DY+ KP R EL + V R
Sbjct: 69 FDLLRALRAK---GTVPVIMLSARNEEADRVLGLELGADDYVAKPFGRPELLARIRAVLR 125
Query: 153 RQS 155
R S
Sbjct: 126 RAS 128
>gi|398804225|ref|ZP_10563224.1| adenylate/guanylate cyclase family protein,protein kinase family
protein [Polaromonas sp. CF318]
gi|398094545|gb|EJL84906.1| adenylate/guanylate cyclase family protein,protein kinase family
protein [Polaromonas sp. CF318]
Length = 690
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKG-RPRNIDLILTEVDLPSISG 92
+L+VE DD+ R + LL+ + + PDGL+ + + RP DLI+++V +P ++G
Sbjct: 4 ILIVEDDDAIRSNIVRLLKLEGFETASAPDGLQGLALARASRP---DLIISDVGMPGMNG 60
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
F LL V N P +++++ D ++ + M GA DYL KP R EL + ++
Sbjct: 61 FELLATVRADRELANTPFMLLTALDDRDSMRRGMTAGADDYLSKPFSRAELLDAVNAQFK 120
Query: 153 RQSSMVSGNETQDESV--GQQKIEA 175
+++ + E D V G+Q++ A
Sbjct: 121 KKARV---REAIDSEVAAGEQRLRA 142
>gi|374316722|ref|YP_005063150.1| response regulator containing a CheY-like receiver domain and an
HD-GYP domain [Sphaerochaeta pleomorpha str. Grapes]
gi|359352366|gb|AEV30140.1| response regulator containing a CheY-like receiver domain and an
HD-GYP domain [Sphaerochaeta pleomorpha str. Grapes]
Length = 341
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
MA ++ + D + R+I+ LL+K Y+VT +G + ++LK +IDLIL ++ +P
Sbjct: 1 MAKHIVTTDDDPAIRKILQILLKKEGYQVTLCTNGNELLDLLKTESESIDLILLDIKMPG 60
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
SGF +L + +IPV+M+++ + T K M GA+DYL KPV R L + +
Sbjct: 61 PSGFEVLESIRHR--YPSIPVVMLTAFSDLDTGMKAMRLGASDYLAKPVLREALISCVER 118
Query: 150 VWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEK 202
V + + + ++ S+ Q+ A + +A +++ E IE+
Sbjct: 119 VIDKSTVQKLEFDQKNNSLANQRDLQEQLRSALLTLKNTTLATLEAFSETIEQ 171
>gi|408795928|gb|AFU91979.1| response regulator 1 protein [Pinus pinaster]
Length = 184
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL----KGRPRNID-----LILTE 84
++ DDS R+++ LL+ SSYRVT V KA + L N+D +I+T+
Sbjct: 17 VLAVDDSVLDRKLIEKLLKISSYRVTTVDSVRKALQFLGLEDDEDDLNVDNIQVNMIITD 76
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+P ++G+ LL V E K+IPV++MSS++ S +CM GA ++L+KPV+ ++++
Sbjct: 77 YCMPGMTGYDLLRRVKESSAVKDIPVVIMSSENVESRKSRCMSEGAQEFLLKPVQLSDVK 136
Query: 145 NLWQHVWRRQSS 156
L H+ + S
Sbjct: 137 KLRSHILNKGRS 148
>gi|356495556|ref|XP_003516642.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 533
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ +W+ F + LRVLL+E D S+ + L Y V+ D +A L P
Sbjct: 8 LQEWKDFPK--GLRVLLLEGDSSSAAEIREQLEAVDYNVSTFYDENEALSALSSSPEGFH 65
Query: 80 LILTEVDLP-SISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
+ + EV S+ GF L E K++P IM S ++T+ KC+ GA ++L KP+
Sbjct: 66 VAIVEVSTSCSLGGFKFL------ENSKDLPTIMTSKDQCLNTMMKCIALGAVEFLSKPL 119
Query: 139 RRNELRNLWQHV 150
++L+N+WQHV
Sbjct: 120 SEDKLKNIWQHV 131
>gi|254459178|ref|ZP_05072600.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|373868639|ref|ZP_09605037.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|207084071|gb|EDZ61361.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|372470740|gb|EHP30944.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
Length = 639
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 26 FLQRMALR----VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLI 81
L+R+ + +L+V+ R +++ LLR+ + V DG A +L P +I+L+
Sbjct: 115 LLKRLEINQYETILVVDDSALFRLMISNLLRRHKFHVLEAEDGKIALNILNKNP-DINLV 173
Query: 82 LTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
+T+ ++P+++G L+ V + K+IP+I++SS D+ ST+ CM GA DYL KP +
Sbjct: 174 ITDYEMPNMNGLELIKSVRNNHKLKDIPMIVISSVDAQSTIVDCMKHGANDYLHKPFSKG 233
Query: 142 ELRNLWQHVWRRQSSMVSGNETQDESVGQ----QKIEATSENDAASNHSSGYMACIQSKG 197
E + R ++ E D Q +K+ S N + Y+ C ++
Sbjct: 234 EF-------YSRLYITLTYKENMDLVAEQKEVYEKLFYQSSNATVIMEDNKYIDCNEAVL 286
Query: 198 EFIEKGSDEQSSCTKP-DFEAE 218
+ ++ + E KP DF E
Sbjct: 287 KLLKLENKEAILNKKPCDFSPE 308
>gi|15218957|ref|NP_176202.1| two-component response regulator ARR3 [Arabidopsis thaliana]
gi|51316126|sp|Q9ZWS9.1|ARR3_ARATH RecName: Full=Two-component response regulator ARR3
gi|5080824|gb|AAD39333.1|AC007258_22 response regulator 3 [Arabidopsis thaliana]
gi|3953595|dbj|BAA34725.1| response regulator 3 [Arabidopsis thaliana]
gi|89111918|gb|ABD60731.1| At1g59940 [Arabidopsis thaliana]
gi|110737841|dbj|BAF00859.1| hypothetical protein [Arabidopsis thaliana]
gi|332195521|gb|AEE33642.1| two-component response regulator ARR3 [Arabidopsis thaliana]
Length = 231
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 78/138 (56%), Gaps = 11/138 (7%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL---------KGRPRNIDLILTE 84
++ DDS R ++ LLR +S +VTAV G +A E L + +DLI+T+
Sbjct: 35 VLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLIITD 94
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+P ++G+ LL + E K +PV++MSS++ ++ + +C+ GA D+L+KPV+ +++
Sbjct: 95 YCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLADVK 154
Query: 145 NLWQHVWRRQSSMVSGNE 162
L ++ R GN+
Sbjct: 155 RLRSYLTRDVKVAAEGNK 172
>gi|346703189|emb|CBX25288.1| hypothetical_protein [Oryza brachyantha]
Length = 200
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 14/135 (10%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL--------------KGRPRN 77
VL V+ R+++ LL+ SS++VT V G KA E L +
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHGHEDSPISVQADQQEAA 68
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++LI+T+ +P ++G+ LL + E ++IPV++MSS++ S + +C+ GA ++ +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSENIPSRINRCLEEGADEFFLKP 128
Query: 138 VRRNELRNLWQHVWR 152
VR +++ L H+ +
Sbjct: 129 VRLSDMSKLKPHILK 143
>gi|302817481|ref|XP_002990416.1| pseudo response regulator [Selaginella moellendorffii]
gi|300141801|gb|EFJ08509.1| pseudo response regulator [Selaginella moellendorffii]
Length = 592
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 15/162 (9%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVP---DGLKAWEVLKGRPRNID 79
W+ F + L VL+ AD R+ ++ +L+ SYRVTA D L A E K
Sbjct: 9 WKDFPK--GLHVLVAIADGDDREEISGILQSCSYRVTAFTSEEDALAAIEKPKTPFHAAM 66
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+ T D+ GF +L E K + VIM+SS + + T+ + + GAAD+L KP
Sbjct: 67 VDATNRDI--FDGFKVL------EAAKELAVIMISSTEDIETMMRAISLGAADFLQKPFS 118
Query: 140 RNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDA 181
+L+N+WQHV R+ +M+S N +V +++ + +D
Sbjct: 119 EEKLKNIWQHVARK--AMLSTNSEPASTVADHEVKPETLDDG 158
>gi|393767682|ref|ZP_10356228.1| transcriptional regulator [Methylobacterium sp. GXF4]
gi|392726945|gb|EIZ84264.1| transcriptional regulator [Methylobacterium sp. GXF4]
Length = 248
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLVE DD R +V +LR+S +RVT G + W +L P +DL+L +V LP SGF
Sbjct: 16 ILLVEDDDGMRVLVGRILRESGFRVTGCRGGAEMWSLLPDTP--VDLVLLDVMLPGASGF 73
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
LL + +PVIM+S+++ + + GA DY+ KP R EL + V RR
Sbjct: 74 DLLRALRAK---GTVPVIMLSARNEEADRVLGLELGADDYVAKPFGRPELLARIRAVLRR 130
Query: 154 QS 155
+
Sbjct: 131 SA 132
>gi|449458817|ref|XP_004147143.1| PREDICTED: uncharacterized protein LOC101203501 [Cucumis sativus]
Length = 607
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSY-----RVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L VLLV+ D + + + +LL + SY +T A +++ + DL++ V
Sbjct: 19 LHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASIALSMIQEKGDRFDLVMANVS 78
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
+P + F+ L ++++ NI VI MSS ++S K + GA +L KP+ R +L+ +
Sbjct: 79 MPDMDSFSFLHVLLK----MNIAVIFMSSGMNLSVATKALAEGACYFLQKPISRGDLKYM 134
Query: 147 WQHVWR------RQSSMVSGNET---QDESVGQQKIEATSENDAASNHSSGYMACIQSK 196
WQHV+R +Q+ + ET + ESVG Q +A + +A+ S CI K
Sbjct: 135 WQHVYRWNRNITKQTYKANCIETAKPRKESVGIQITDAVVLSRSAAAVSYNNNCCINYK 193
>gi|411118665|ref|ZP_11391045.1| signal transduction histidine kinase [Oscillatoriales
cyanobacterium JSC-12]
gi|410710528|gb|EKQ68035.1| signal transduction histidine kinase [Oscillatoriales
cyanobacterium JSC-12]
Length = 695
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+L+V+ DD+ +T LR+ S + DG A +++ +P DL+L ++ +P I+G
Sbjct: 7 RLLIVDDDDTVCTYLTRQLRQFSQTIAIANDGQAAIDLIHAQP--FDLVLLDILMPGING 64
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
F +L + H I PVI++S D + ++ +C+ GA DYL KP+ L+
Sbjct: 65 FQVLESLKSHAILPQTPVIVISGLDDLDSLIRCIELGAEDYLFKPLNPVLLK-------- 116
Query: 153 RQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSSCTK 212
++ A E N Y+A +QS EK + E ++ K
Sbjct: 117 ------------------ARVSACLERKHLRNQEKEYLATLQS-----EKRAAETANRAK 153
Query: 213 PDFEAESAHVEDMPDLSRQLWGKSLQNDVK 242
+F A +H P + + LQ D+K
Sbjct: 154 NEFLANMSHELRTPLNAIIGYSDILQEDLK 183
>gi|308812550|ref|XP_003083582.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
gi|116055463|emb|CAL58131.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
Length = 297
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
+P + GF LL ++ + E+ N+PV+MMS+ S V + ++ GA DYL+KPVR ELRN+
Sbjct: 1 MPDVDGFKLLEII-QFEL--NLPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNI 57
Query: 147 WQHVWRRQSS 156
WQHV RR S
Sbjct: 58 WQHVVRRDYS 67
>gi|328868868|gb|EGG17246.1| cAMP-specific phosphodiesterase [Dictyostelium fasciculatum]
Length = 842
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 11/120 (9%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
++ +L+V+ D + R+++ LL K Y VT V +AW +L DL+LT+V +P +
Sbjct: 144 SIHILVVDDDITQRKVLQNLLSKVFYNVTLVSSAEEAWNMLIYGTTKFDLVLTDVMMPQV 203
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKC------MMRGAADYLVKPVRRNELR 144
+GF LL + EH KNIPVI+MS T C + G D++ KP+ + L+
Sbjct: 204 TGFDLLQRINEHPEIKNIPVILMS-----GTALDCKYANDTIKIGGQDFVTKPIAKELLK 258
>gi|224102357|ref|XP_002312648.1| type-b response regulator [Populus trichocarpa]
gi|222852468|gb|EEE90015.1| type-b response regulator [Populus trichocarpa]
Length = 642
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 57/230 (24%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT------- 83
LRVL+V+ D + +I+ +L+K SY VT A +L+ R D++++
Sbjct: 17 GLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKGGYDIVISDVYMPDM 76
Query: 84 -----------EVDLPSISGFALLTLVME-----------------HEICKNIPV----- 110
E+DLP IS F LTL H I I +
Sbjct: 77 DGFKLLEQVGLEMDLPVISRFFSLTLEFYFNANIFYLRIHIPMSCLHYIYIGILIQLLTS 136
Query: 111 -----IMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQD 165
+MS S V K + GA DYL+KP+R ELRN+WQHV+R++ V ET
Sbjct: 137 CACQLTVMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIET-- 194
Query: 166 ESVGQQKIEATS-ENDAASNHSSGYMACIQ-----SKGEFIEKGSDEQSS 209
+++E+ + + + G++ C + K + IE DE+ +
Sbjct: 195 ----LERVESFQMTRNGSDQYEDGHVLCGEDLTSIKKRKHIESKHDEKDT 240
>gi|78356619|ref|YP_388068.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
gi|78219024|gb|ABB38373.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
Length = 123
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 66/114 (57%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M+ +L+V+ + R +V +++K +RVT DGL E L +DLI+++V++P
Sbjct: 1 MSKHILIVDDSKTVRNLVAFIMKKEGFRVTMAEDGLDGLEKLYSAEETVDLIISDVNMPR 60
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ GF + V E + +++P++++S++ + M GA Y+VKP + +++
Sbjct: 61 MDGFTFIKTVREQDTYRDLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQPDKM 114
>gi|302781008|ref|XP_002972278.1| hypothetical protein SELMODRAFT_97144 [Selaginella moellendorffii]
gi|300159745|gb|EFJ26364.1| hypothetical protein SELMODRAFT_97144 [Selaginella moellendorffii]
Length = 293
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 28/149 (18%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL-------------------- 71
+ VL V+ R++V LL+ SSY+VT V +A EVL
Sbjct: 8 IHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINVSSHLLVHF 67
Query: 72 --------KGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVY 123
+ I+LI+T+ +P ++G+ LL V E K IPV++MSS++ +
Sbjct: 68 LCFLWLLLLLQAIKINLIITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERIT 127
Query: 124 KCMMRGAADYLVKPVRRNELRNLWQHVWR 152
CM GA ++++KP+R +++ L H+ R
Sbjct: 128 MCMAEGAKEFILKPLRVADVKRLRSHIQR 156
>gi|428312293|ref|YP_007123270.1| family 3 adenylate cyclase [Microcoleus sp. PCC 7113]
gi|428253905|gb|AFZ19864.1| family 3 adenylate cyclase [Microcoleus sp. PCC 7113]
Length = 353
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 77/138 (55%), Gaps = 6/138 (4%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
RVL+V+ +++ R ++ +R+ + VT DG+KA E++ P DL+L ++ +P ++G
Sbjct: 7 RVLVVDDNEANRDLLARRVRRQGHTVTVAEDGIKALELMAQEP--FDLVLLDIMMPKMNG 64
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP----VRRNELRNLWQ 148
+ +L + ++IPVI++S+ D +++V +C+ GA DYL KP + +RN +
Sbjct: 65 YQVLEHLKNDPNLRHIPVIVISAVDDINSVVECIELGAEDYLPKPFNAVLLAARIRNCLE 124
Query: 149 HVWRRQSSMVSGNETQDE 166
W R + Q E
Sbjct: 125 KKWLRDQEQFYLQQLQAE 142
>gi|195644464|gb|ACG41700.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 234
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 26/148 (17%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-------------- 76
R ++ DDS R+++ LL+ SSY+VT V G KA E+L R
Sbjct: 9 RFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVESGNKALELLGLRDNGAEDASPPSSSSSS 68
Query: 77 ----------NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCM 126
++ LI+T+ +P ++G+ LL V K+IPV++MSS++ + + +C+
Sbjct: 69 SSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCL 128
Query: 127 MRGAADYLVKPVRRNELRNLWQHVWRRQ 154
GA ++ +KPV+ +++ L H+ +R+
Sbjct: 129 QDGAEEFFLKPVKPADMKKLKSHLLKRK 156
>gi|392951366|ref|ZP_10316921.1| hypothetical protein WQQ_09930 [Hydrocarboniphaga effusa AP103]
gi|391860328|gb|EIT70856.1| hypothetical protein WQQ_09930 [Hydrocarboniphaga effusa AP103]
Length = 1327
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 28 QRMALRVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
QR A R ++ ADD+ R+ V +LL + + V+ V DGL AW+ L+G P DL+LT+V
Sbjct: 619 QRQARRARVLLADDNADMREYVHSLL-SAQHEVSCVADGLAAWQALQGEPP--DLLLTDV 675
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+P + GF LL V + +PV+++S++ + + + GA DYLVKP EL
Sbjct: 676 MMPGLDGFGLLRRVRGDARLRELPVVLLSARAGEESRVEGLNAGADDYLVKPFAAKEL 733
>gi|226492050|ref|NP_001146776.1| uncharacterized protein LOC100280379 [Zea mays]
gi|223942947|gb|ACN25557.1| unknown [Zea mays]
gi|413951289|gb|AFW83938.1| response regulator 4 [Zea mays]
Length = 233
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 27/149 (18%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-------------- 76
R ++ DDS R+++ LL+ SSY+VT V G KA E+L R
Sbjct: 9 RFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGAEDASPPSSSSSS 68
Query: 77 -----------NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKC 125
++ LI+T+ +P ++G+ LL V K+IPV++MSS++ + + +C
Sbjct: 69 SSSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRC 128
Query: 126 MMRGAADYLVKPVRRNELRNLWQHVWRRQ 154
+ GA ++ +KPV+ +++ L H+ +R+
Sbjct: 129 LQDGAEEFFLKPVKPADMKKLKSHLLKRK 157
>gi|15230202|ref|NP_191263.1| two-component response regulator ARR9 [Arabidopsis thaliana]
gi|51315815|sp|O80366.1|ARR9_ARATH RecName: Full=Two-component response regulator ARR9; AltName:
Full=Response reactor 4
gi|3273202|dbj|BAA31146.1| responce reactor4 [Arabidopsis thaliana]
gi|6911874|emb|CAB72174.1| responce reactor 4 [Arabidopsis thaliana]
gi|19699061|gb|AAL90898.1| AT3g57040/F24I3_120 [Arabidopsis thaliana]
gi|22137112|gb|AAM91401.1| At3g57040/F24I3_120 [Arabidopsis thaliana]
gi|332646081|gb|AEE79602.1| two-component response regulator ARR9 [Arabidopsis thaliana]
Length = 234
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 21/138 (15%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGR--------------PRN-- 77
++ DDS R+++ LL+KSS +VT V G KA E L R P N
Sbjct: 11 VLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVNHQ 70
Query: 78 ---IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYL 134
++LI+T+ +P ++G+ LL V E ++IPV++MSS++ + + +C+ GA ++
Sbjct: 71 VVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFF 130
Query: 135 VKPVRRNELRNLWQHVWR 152
+KPVR +L L H+ +
Sbjct: 131 LKPVRLADLNKLKPHMMK 148
>gi|449503419|ref|XP_004161993.1| PREDICTED: uncharacterized protein LOC101230585 [Cucumis sativus]
Length = 557
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSY-----RVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L VLLV+ D + + + +LL + SY +T A +++ + DL++ V
Sbjct: 19 LHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASIALSMIQEKGDRFDLVMANVS 78
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
+P + F+ L ++++ NI VI MSS ++S K + GA +L KP+ R +L+ +
Sbjct: 79 MPDMDSFSFLHVLLK----MNIAVIFMSSGMNLSVATKALAEGACYFLQKPISRGDLKYM 134
Query: 147 WQHVWR------RQSSMVSGNET---QDESVGQQKIEATSENDAASNHSSGYMACIQSK 196
WQHV+R +Q+ + ET + ESVG Q +A + +A+ S CI K
Sbjct: 135 WQHVYRWNRNITKQTYKANCIETAKPRKESVGIQITDAVVLSRSAAAVSYNNNCCINYK 193
>gi|109631208|gb|ABG35780.1| SRR198 [Striga asiatica]
Length = 238
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 79/139 (56%), Gaps = 20/139 (14%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL----------KGR---PRN--- 77
++ DDS R+++ LL+ SS++VT V G KA E L KG P+
Sbjct: 12 VLAVDDSLIDRKLIEKLLKNSSFQVTTVDSGSKALEFLGWHRDERSNSKGTSVSPKTHQE 71
Query: 78 --IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++L++T+ +P ++G+ LL + E KNIPV+++SS++ S + +C+ GA ++ +
Sbjct: 72 VEVNLVITDYCMPGMTGYDLLKKMKESSSLKNIPVVIVSSENVPSRITRCLEEGAEEFFL 131
Query: 136 KPVRRNELRNLWQHVWRRQ 154
KP++ ++ LW ++ R +
Sbjct: 132 KPMKLTDVNKLWPYMLRTK 150
>gi|309951226|emb|CBX43983.1| putative A-type response regulator 1b [Populus x canadensis]
Length = 257
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 91/165 (55%), Gaps = 29/165 (17%)
Query: 34 VLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKA---------------------WEV 70
V ++ DDS R+++ LL+ SS +VTAV G +A ++V
Sbjct: 34 VHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLDEEDKSSSSSSSAGFDV 93
Query: 71 LKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGA 130
LK +DLI+T+ +P ++G+ LL + E + IPV++MSS++ V+ + +C+ GA
Sbjct: 94 LK-----VDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSENVVARIDRCLEEGA 148
Query: 131 ADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDES-VGQQKIE 174
D++VKPV+ ++++ + ++ R+ V E + S + ++K++
Sbjct: 149 EDFIVKPVKLSDVKRIRDYMASREVRSVQNQEERSSSNINKRKLQ 193
>gi|242084508|ref|XP_002442679.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
gi|241943372|gb|EES16517.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
Length = 236
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 74/134 (55%), Gaps = 13/134 (9%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL------KGRPRNID------ 79
VL V+ R+++ LL+ SS++VT V G KA + L P + D
Sbjct: 45 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDDHSPVPVHTDQLDVAV 104
Query: 80 -LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
LI+T+ +P ++G+ LL + E ++IPV++MSS++ S + +C+ GA ++ +KPV
Sbjct: 105 NLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADEFFLKPV 164
Query: 139 RRNELRNLWQHVWR 152
R +++ L H+ +
Sbjct: 165 RLSDMNKLKPHILK 178
>gi|162459025|ref|NP_001104855.1| LOC541630 [Zea mays]
gi|12060384|dbj|BAB20579.1| response regulator 4 [Zea mays]
Length = 235
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 27/149 (18%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-------------- 76
R ++ DDS R+++ LL+ SSY+VT V G KA E+L R
Sbjct: 9 RFHVLAVDDSIIDRKLIEMLLKSSSYQVTTVESGNKALELLGLRDNGAEDASPPSSSSSS 68
Query: 77 -----------NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKC 125
++ LI+T+ +P ++G+ LL V K+IPV++MSS++ + + +C
Sbjct: 69 SSSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRC 128
Query: 126 MMRGAADYLVKPVRRNELRNLWQHVWRRQ 154
+ GA ++ +KPV+ +++ L H+ +R+
Sbjct: 129 LQDGAEEFFLKPVKPADMKKLKSHLLKRK 157
>gi|147768948|emb|CAN69259.1| hypothetical protein VITISV_026384 [Vitis vinifera]
Length = 210
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 80/138 (57%), Gaps = 14/138 (10%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLK-GRPRN--------IDLILTE 84
++ DDS R+++ LL+ SS +VTAV G +A + L +N +DLI+T+
Sbjct: 21 VLAVDDSLVDRKVIERLLKISSCKVTAVDSGRRALQFLGLDEEKNSAGLDGLKVDLIITD 80
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+P ++G+ LL + E + PV++MSS++ ++ + +C+ GA D++VKPV+ ++++
Sbjct: 81 YCMPGMTGYELLKKIKESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPVKLSDVK 140
Query: 145 NLWQHVWRRQSSMVSGNE 162
L ++ R GNE
Sbjct: 141 RLKDYMTREDR---DGNE 155
>gi|309951234|emb|CBX43987.1| putative A-type response regulator 5 [Populus x canadensis]
Length = 198
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 20/129 (15%)
Query: 44 RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN--------------------IDLILT 83
R+++ LL+ SSY+VTAV G KA E L N I++I+T
Sbjct: 29 RKLIERLLKTSSYQVTAVDSGSKALEFLGLNGENELRDSEPASVSPDPYHQHIEINMIIT 88
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + E + K+IPV++MSS++ S + +C+ GA ++ +KPV+ +++
Sbjct: 89 DYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLKEGAEEFFLKPVQLSDV 148
Query: 144 RNLWQHVWR 152
L H+ +
Sbjct: 149 NKLRPHLMK 157
>gi|224053258|ref|XP_002297741.1| type-a response regulator [Populus trichocarpa]
gi|222844999|gb|EEE82546.1| type-a response regulator [Populus trichocarpa]
Length = 203
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 20/129 (15%)
Query: 44 RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN--------------------IDLILT 83
R+++ LL+ SSY+VTAV G KA E L N I++I+T
Sbjct: 29 RKLIERLLKTSSYQVTAVDSGSKALEFLGLNGENELRDSKPASVSPDPYHQHIEINMIIT 88
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + E + K+IPV++MSS++ S + +C+ GA ++ +KPV+ +++
Sbjct: 89 DYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLKEGAEEFFLKPVQLSDV 148
Query: 144 RNLWQHVWR 152
L H+ +
Sbjct: 149 NKLRPHLMK 157
>gi|115375378|ref|ZP_01462640.1| multi-sensor Hybrid Histidine Kinase [Stigmatella aurantiaca
DW4/3-1]
gi|115367580|gb|EAU66553.1| multi-sensor Hybrid Histidine Kinase [Stigmatella aurantiaca
DW4/3-1]
Length = 1358
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+LL + + R VT LL + V VPDG A + P + L+LT+V +P + G
Sbjct: 688 RILLADDNADIRGYVTQLLTAQGWTVETVPDGEAALARAQAHPPH--LVLTDVMMPRLDG 745
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
F LL + HE +++PVI++S++ + M +GA DYLVKP EL
Sbjct: 746 FGLLRALKAHEKTQHVPVILLSARAGEEATVEGMQQGADDYLVKPFSAKEL 796
>gi|296086487|emb|CBI32076.3| unnamed protein product [Vitis vinifera]
Length = 221
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 80/138 (57%), Gaps = 14/138 (10%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLK-GRPRN--------IDLILTE 84
++ DDS R+++ LL+ SS +VTAV G +A + L +N +DLI+T+
Sbjct: 32 VLAVDDSLVDRKVIERLLKISSCKVTAVDSGRRALQFLGLDEEKNSAGLDGLKVDLIITD 91
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+P ++G+ LL + E + PV++MSS++ ++ + +C+ GA D++VKPV+ ++++
Sbjct: 92 YCMPGMTGYELLKKIKESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPVKLSDVK 151
Query: 145 NLWQHVWRRQSSMVSGNE 162
L ++ R GNE
Sbjct: 152 RLKDYMTREDR---DGNE 166
>gi|224033189|gb|ACN35670.1| unknown [Zea mays]
gi|413915889|gb|AFW55821.1| response regulator 6 [Zea mays]
Length = 262
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 90/173 (52%), Gaps = 21/173 (12%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN-------------- 77
VL V+ R+++ LL+ SS++VT V G KA + L ++
Sbjct: 69 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVA 128
Query: 78 ------IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAA 131
++LI+T+ +P ++G+ LL + E ++IPV++MSS++ S + +C+ GA
Sbjct: 129 ANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGAD 188
Query: 132 DYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASN 184
++ +KPVR +++ L H+ + + + ++ D G+++ S +D+ +N
Sbjct: 189 EFFLKPVRLSDMNKLKPHILKSRCNQ-EQHQQSDSHSGERRNPTISSSDSINN 240
>gi|225465887|ref|XP_002267375.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
gi|296090339|emb|CBI40158.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 75/125 (60%), Gaps = 8/125 (6%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL----KGRPRNIDLILTEVDLPS 89
++ DDS R+ + LL+ SS++VT V KA E L + R ++LI+T+ +P
Sbjct: 11 VLAVDDSLVDRKWIEKLLKTSSFQVTVVDSVSKALEFLGLQEAEQERKVNLIITDYSMPG 70
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
++G+ LL + E K+IPV++MSS++ S + +C+ GA D+ +KPV+ +++ L H
Sbjct: 71 MTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLSDVNKLRPH 130
Query: 150 V--WR 152
+ WR
Sbjct: 131 LLGWR 135
>gi|370988687|dbj|BAL43557.1| type-A response regulator [Petunia x hybrida]
Length = 227
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 27/154 (17%)
Query: 19 GIAKWETFLQRMALRVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL----- 71
G+A E+ +A+ DDS R+++ LL+ SS +VT V G KA E L
Sbjct: 2 GMAAAESQFHVLAV-------DDSLIDRKLIERLLKTSSCQVTTVDSGSKALEFLGLQEH 54
Query: 72 -------------KGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDS 118
+ I+LI+T+ +P ++G+ LL + E +NIPV++MSS++
Sbjct: 55 EQNKSNQPCVSLDNHQEAEINLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENV 114
Query: 119 VSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
S + +C+ GA ++ +KPVR +++ L H+ +
Sbjct: 115 PSRINRCLEEGAEEFFLKPVRLSDVNKLRPHMMK 148
>gi|351721065|ref|NP_001237197.1| uncharacterized protein LOC100527518 [Glycine max]
gi|255632528|gb|ACU16614.1| unknown [Glycine max]
Length = 211
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 77/131 (58%), Gaps = 10/131 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN---------IDLIL 82
L+VL V+ R+++ LLR SS +VT V G +A + L N ++LI+
Sbjct: 26 LQVLAVDDSLVDRKVIERLLRISSCKVTVVESGTRALQYLGLDGGNSSLGFDSVKVNLIM 85
Query: 83 TEVDLPSISGFALLTLV-MEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
T+ +P ++G+ LL + E + + IPV++MSS++ ++ + +C+ GA D+L+KPV+ +
Sbjct: 86 TDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLS 145
Query: 142 ELRNLWQHVWR 152
++R L + +
Sbjct: 146 DVRRLKDFIMK 156
>gi|297850294|ref|XP_002893028.1| hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp.
lyrata]
gi|297338870|gb|EFH69287.1| hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp.
lyrata]
Length = 209
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL-----KG----RPRNIDLIL 82
L VL V+ R+++ LLR SS +VT V G +A + L KG + ++LI+
Sbjct: 24 LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLIV 83
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + +PV++MSS++ + + +C+ GA ++L+KPV+ +
Sbjct: 84 TDYSMPGLTGYDLLKKIKESSAFREVPVVIMSSENILPRIEECLKEGAEEFLLKPVKLAD 143
Query: 143 LRNLWQHVWRRQS 155
++ + Q + + ++
Sbjct: 144 VKRIKQLILKNEA 156
>gi|310825183|ref|YP_003957541.1| sensor protein [Stigmatella aurantiaca DW4/3-1]
gi|309398255|gb|ADO75714.1| Sensor protein [Stigmatella aurantiaca DW4/3-1]
Length = 1311
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+LL + + R VT LL + V VPDG A + P + L+LT+V +P + G
Sbjct: 641 RILLADDNADIRGYVTQLLTAQGWTVETVPDGEAALARAQAHPPH--LVLTDVMMPRLDG 698
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
F LL + HE +++PVI++S++ + M +GA DYLVKP EL
Sbjct: 699 FGLLRALKAHEKTQHVPVILLSARAGEEATVEGMQQGADDYLVKPFSAKEL 749
>gi|308273188|emb|CBX29791.1| Transcriptional regulatory protein zraR [uncultured
Desulfobacterium sp.]
Length = 449
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VLLVE + + +T+L ++ YR++AV DG A +++ G D++++E++LP +SG
Sbjct: 6 VLLVENNKNETAAMTSLFNRAGYRLSAVSDGYAALDIISGN--QYDMVISELNLPRMSGI 63
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
LL + EI N+PVI++S V + M GA D+L+KP+ + + ++R
Sbjct: 64 ELLVKI--KEIDTNLPVILISGDVCVKEAVEAMKNGAYDFLLKPLAAETVECIVSGIYR 120
>gi|224102663|ref|XP_002312769.1| type-a response regulator [Populus trichocarpa]
gi|222852589|gb|EEE90136.1| type-a response regulator [Populus trichocarpa]
Length = 258
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 91/167 (54%), Gaps = 31/167 (18%)
Query: 34 VLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKA-----------------------W 68
V ++ DDS R+++ LL+ SS +VTAV G +A +
Sbjct: 34 VHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLDEEDKSSSSSSSSSAGF 93
Query: 69 EVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMR 128
+VLK +DLI+T+ +P ++G+ LL + E + IPV++MSS++ V+ + +C+
Sbjct: 94 DVLK-----VDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSENVVARIDRCLEE 148
Query: 129 GAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDES-VGQQKIE 174
GA D++VKPV+ ++++ + ++ R+ V E + S + ++K++
Sbjct: 149 GAEDFIVKPVKLSDVKRIRDYMASREVRSVQNQEERSSSNINKRKLQ 195
>gi|449533717|ref|XP_004173818.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 255
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 75/137 (54%), Gaps = 20/137 (14%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN---------------- 77
++ DDS R+++ LL+ SSY+VT V G KA E L P N
Sbjct: 18 VLAVDDSVIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGYDPGNSSIPSVSSNHHHHHQE 77
Query: 78 --IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++L++T+ +P ++G+ LL + +NIPV++MSS++ + + +C+ GA ++ +
Sbjct: 78 VDVNLVITDYCMPEMTGYDLLKKIKGSTALRNIPVVIMSSENVPARINRCLEEGAEEFFL 137
Query: 136 KPVRRNELRNLWQHVWR 152
KPV+ +++ L H+ +
Sbjct: 138 KPVQLSDVNRLRPHMLK 154
>gi|333916552|ref|YP_004490284.1| CheA signal transduction histidine kinase [Delftia sp. Cs1-4]
gi|333746752|gb|AEF91929.1| CheA signal transduction histidine kinase [Delftia sp. Cs1-4]
Length = 2140
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 82/144 (56%), Gaps = 9/144 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL-KGRPRNIDLILTEVDLPSISG 92
VL+V+ + R++ LL++ YRV DGL+A E L + RP L+L+++++P + G
Sbjct: 1995 VLVVDDSITVRRVTQRLLQREGYRVALAADGLQAMERLAEERP---TLVLSDIEMPRMDG 2051
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMR--GAADYLVKPVRRNELRNLWQHV 150
F LL + E +++PV+M++S+ ++ ++ M R GA YL KP EL L QH
Sbjct: 2052 FDLLRNIRADEALRDLPVVMITSR--IAQKHREMARQLGANHYLGKPYSDEELLGLIQH- 2108
Query: 151 WRRQSSMVSGNETQDESVGQQKIE 174
+ Q +SG +S+ Q+++
Sbjct: 2109 YSLQGGSISGGPLAPQSLQAQQVD 2132
>gi|449453183|ref|XP_004144338.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 261
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 75/137 (54%), Gaps = 20/137 (14%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN---------------- 77
++ DDS R+++ LL+ SSY+VT V G KA E L P N
Sbjct: 18 VLAVDDSVIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGYDPGNSSIPSVSSNHHHHHQE 77
Query: 78 --IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++L++T+ +P ++G+ LL + +NIPV++MSS++ + + +C+ GA ++ +
Sbjct: 78 VDVNLVITDYCMPEMTGYDLLKKIKGSTALRNIPVVIMSSENVPARINRCLEEGAEEFFL 137
Query: 136 KPVRRNELRNLWQHVWR 152
KPV+ +++ L H+ +
Sbjct: 138 KPVQLSDVNRLRPHMLK 154
>gi|13173408|gb|AAK14395.1|AF339732_1 response regulator protein [Dianthus caryophyllus]
Length = 264
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 75/126 (59%), Gaps = 11/126 (8%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL--KGRPRN-------IDLILTE 84
++ DDS R+++ LL+ +S +VT V G++A E L R IDLI+T+
Sbjct: 37 VLAVDDSLIDRKVIERLLKTTSCKVTVVDSGMRALEFLGLDAEQRTSVVDGLKIDLIITD 96
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+P ++G+ LL + E K PV++MSS++ ++ + +C+ GA D+++KPV+ ++++
Sbjct: 97 YCMPGMTGYELLKKIKESSTFKETPVVIMSSENVIARIDRCLEEGAEDFILKPVKLSDVK 156
Query: 145 NLWQHV 150
L ++
Sbjct: 157 RLRDYM 162
>gi|320354436|ref|YP_004195775.1| response regulator receiver protein [Desulfobulbus propionicus DSM
2032]
gi|320122938|gb|ADW18484.1| response regulator receiver protein [Desulfobulbus propionicus DSM
2032]
Length = 451
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAW-EVLKGRPRNIDLILTEVDLPSISG 92
+L+VE +TR+++ L + YRV DGL+A +V + RP DLI+ +V LP + G
Sbjct: 336 ILVVEDSSTTRKVIAITLSRQGYRVVEAADGLEALSKVSEERP---DLIMLDVILPKMDG 392
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
+ +L+++ ++ K+IPVIM++S+D + K M G++ YL KP
Sbjct: 393 YKILSIIKGNKEFKDIPVIMLTSKDGFISKMKGKMAGSSAYLTKP 437
>gi|225427316|ref|XP_002279150.1| PREDICTED: two-component response regulator-like APRR2 [Vitis
vinifera]
gi|297742160|emb|CBI33947.3| unnamed protein product [Vitis vinifera]
Length = 557
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ +W+ F + LRVLL++ D ++ + + L + Y V+ + +A + +P +
Sbjct: 8 LQEWKDFPK--GLRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPESFH 65
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+ + EV + F L E K++P IM+SS +ST+ KC+ GA ++L KP+
Sbjct: 66 VAIVEVSTGNNGSFKFL------ETAKDLPTIMISSIHCLSTMMKCIALGAVEFLRKPLS 119
Query: 140 RNELRNLWQHV 150
++LRN+WQHV
Sbjct: 120 EDKLRNIWQHV 130
>gi|309951224|emb|CBX43982.1| putative A-type response regulator 1a [Populus x canadensis]
Length = 255
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 91/167 (54%), Gaps = 31/167 (18%)
Query: 34 VLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKA-----------------------W 68
V ++ DDS R+++ LL+ SS +VTAV G +A +
Sbjct: 34 VHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLDEEDKSSSSSSSSSAGF 93
Query: 69 EVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMR 128
+VLK +DLI+T+ +P ++G+ LL + E + IPV++MSS++ V+ + +C+
Sbjct: 94 DVLK-----VDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSENVVARIDRCLEE 148
Query: 129 GAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDES-VGQQKIE 174
GA D++VKPV+ ++++ + ++ R+ V E + S + ++K++
Sbjct: 149 GAEDFIVKPVKLSDVKRIRDYMASREVRSVQNQEERSSSNINKRKLQ 195
>gi|125658123|gb|ABN48988.1| type A response regulator RR1 [Phaseolus vulgaris]
Length = 227
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 80/136 (58%), Gaps = 15/136 (11%)
Query: 34 VLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-------------NI 78
V ++ DDS R+++ LL+ S+ +VTAV G++A + L + +
Sbjct: 20 VHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESDGFVPSLKV 79
Query: 79 DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
DLI+T+ +P ++G+ LL + E + + IPV++MSS++ + + +C+ GA D++VKPV
Sbjct: 80 DLIITDYCMPEMTGYELLKKIKESSMFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPV 139
Query: 139 RRNELRNLWQHVWRRQ 154
+ ++++ L ++ R+
Sbjct: 140 KLSDVKRLKGYMTTRE 155
>gi|194694438|gb|ACF81303.1| unknown [Zea mays]
Length = 235
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 90/173 (52%), Gaps = 21/173 (12%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN-------------- 77
VL V+ R+++ LL+ SS++VT V G KA + L ++
Sbjct: 42 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVA 101
Query: 78 ------IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAA 131
++LI+T+ +P ++G+ LL + E ++IPV++MSS++ S + +C+ GA
Sbjct: 102 ANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGAD 161
Query: 132 DYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASN 184
++ +KPVR +++ L H+ + + + ++ D G+++ S +D+ +N
Sbjct: 162 EFFLKPVRLSDMNKLKPHILKSRCNQ-EQHQQSDSHSGERRNPTISSSDSINN 213
>gi|297733851|emb|CBI15098.3| unnamed protein product [Vitis vinifera]
Length = 296
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 77/130 (59%), Gaps = 9/130 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL--KGRPRNI-------DLIL 82
L VL V+ R+++ LL+ SS +VTAV G +A + L G ++ +LI+
Sbjct: 103 LHVLAVDDSHVDRKVIERLLKISSCKVTAVESGTRALQFLGLDGEENSVGFDGLKVNLIM 162
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + + IPV++MSS++ ++ + +C+ GA +++VKPV+ +
Sbjct: 163 TDYSMPGMTGYELLKKIKESKAFRKIPVVIMSSENILTRIDRCLEEGAEEFIVKPVKLAD 222
Query: 143 LRNLWQHVWR 152
+R L + R
Sbjct: 223 VRRLRDFIMR 232
>gi|449449356|ref|XP_004142431.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
gi|449527272|ref|XP_004170636.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 173
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 24/144 (16%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLK-GRPRN------------ 77
R ++ DDS R+++ LL+ SS+ VT V G KA E+L R RN
Sbjct: 10 RFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNHSSPISPED 69
Query: 78 ---------IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMR 128
++LI+T+ +P ++GF LL + E + K+IPV++MSS++ S + +C+
Sbjct: 70 HRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINRCLEE 129
Query: 129 GAADYLVKPVRRNELRNLWQHVWR 152
GA ++L+KPV+ +++ L + R
Sbjct: 130 GAEEFLLKPVKLSDVNKLKPFICR 153
>gi|297849384|ref|XP_002892573.1| hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp.
lyrata]
gi|297338415|gb|EFH68832.1| hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 11/130 (8%)
Query: 34 VLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL---------KGRPRNIDLIL 82
V ++ DDS R ++ LLR +S +VTAV G +A E L + +DLI+
Sbjct: 31 VHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLII 90
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + +PV++MSS++ ++ + +C+ GA D+L+KPV+ +
Sbjct: 91 TDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLAD 150
Query: 143 LRNLWQHVWR 152
++ L H+ +
Sbjct: 151 VKRLRNHLTK 160
>gi|407699472|ref|YP_006824259.1| two-component system response regulator [Alteromonas macleodii str.
'Black Sea 11']
gi|407248619|gb|AFT77804.1| two-component system response regulator [Alteromonas macleodii str.
'Black Sea 11']
Length = 446
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLV+ D S +++T L Y VTAV DG A L+ N D++L+++ +P + G
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYHVTAVEDGQSALRKLQND--NYDVVLSDLRMPGLDGL 68
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+L +M I K+IPVI+M++ +++ RG +L KPV +ELR L Q +
Sbjct: 69 SLFEEIMG--IRKDIPVILMTAHGTIADAVAATQRGVFGFLPKPVDHDELRALLQKALSQ 126
Query: 154 QSSMVSGNETQD 165
+ G+ +D
Sbjct: 127 SQAAQPGDWAKD 138
>gi|256421295|ref|YP_003121948.1| response regulator receiver protein [Chitinophaga pinensis DSM
2588]
gi|256036203|gb|ACU59747.1| response regulator receiver protein [Chitinophaga pinensis DSM
2588]
Length = 128
Score = 73.6 bits (179), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 68/114 (59%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M+ R+LLVE D+ +I+ +L K Y++ V +G +A++ L+ N DLI+T++ +P
Sbjct: 1 MSTRILLVEDDEVMPKIMERILHKEEYKIEHVTNGKEAFQRLEDNNYNYDLIITDIMMPY 60
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+GF +L+ V + K IPVI++S+ + + + GA D+L KPV EL
Sbjct: 61 ANGFEILSKVKTRKDGKPIPVIIVSNAGNEEMILEGFKLGADDFLKKPVIPGEL 114
>gi|15218550|ref|NP_172517.1| two-component response regulator ARR4 [Arabidopsis thaliana]
gi|51315817|sp|O82798.1|ARR4_ARATH RecName: Full=Two-component response regulator ARR4; AltName:
Full=Response regulator 1
gi|5091539|gb|AAD39568.1|AC007067_8 T10O24.8 [Arabidopsis thaliana]
gi|3273196|dbj|BAA31143.1| responce regulator1 [Arabidopsis thaliana]
gi|3323583|gb|AAC26636.1| two-component response regulator homolog [Arabidopsis thaliana]
gi|3953597|dbj|BAA34726.1| response regulator 4 [Arabidopsis thaliana]
gi|87116590|gb|ABD19659.1| At1g10470 [Arabidopsis thaliana]
gi|110740750|dbj|BAE98474.1| putative response regulator 3 [Arabidopsis thaliana]
gi|332190462|gb|AEE28583.1| two-component response regulator ARR4 [Arabidopsis thaliana]
Length = 259
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 82/150 (54%), Gaps = 10/150 (6%)
Query: 13 EMNGNEGIAKWETF-LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL 71
EM GI E+ L + VL V+ R ++ LLR +S +VTAV G +A E L
Sbjct: 14 EMMSVGGIGGIESAPLDLDEVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFL 73
Query: 72 ---------KGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTV 122
+ +DLI+T+ +P ++G+ LL + E + +PV++MSS++ ++ +
Sbjct: 74 GLDNEKASAEFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRI 133
Query: 123 YKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
+C+ GA D+L+KPV+ +++ L H+ +
Sbjct: 134 DRCLEEGAQDFLLKPVKLADVKRLRSHLTK 163
>gi|406596174|ref|YP_006747304.1| two-component system response regulator [Alteromonas macleodii ATCC
27126]
gi|407683118|ref|YP_006798292.1| two-component system response regulator [Alteromonas macleodii str.
'English Channel 673']
gi|407687035|ref|YP_006802208.1| two-component system response regulator [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|406373495|gb|AFS36750.1| two-component system response regulator [Alteromonas macleodii ATCC
27126]
gi|407244729|gb|AFT73915.1| two-component system response regulator [Alteromonas macleodii str.
'English Channel 673']
gi|407290415|gb|AFT94727.1| two-component system response regulator [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 446
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLV+ D S +++T L Y VTAV DG A L+ N D++L+++ +P + G
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYEVTAVEDGQSALRKLQND--NYDVVLSDLRMPGLDGL 68
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+L +M I K+IPVI+M++ +++ RG +L KPV +ELR L Q +
Sbjct: 69 SLFEEIMG--IRKDIPVILMTAHGTIADAVAATQRGVFGFLPKPVDHDELRALLQKALSQ 126
Query: 154 QSSMVSGNETQD 165
+ G+ +D
Sbjct: 127 SQAAQPGDWAKD 138
>gi|374301471|ref|YP_005053110.1| response regulator receiver protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332554407|gb|EGJ51451.1| response regulator receiver protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 123
Score = 73.6 bits (179), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M+ +L+V+ + R +V +++K ++VT DGL E L +IDLI+++V++P
Sbjct: 1 MSKHILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKLYSN--SIDLIISDVNMPR 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ GF + +V E E K+ P++++S++ + + M GA YLVKP + ++
Sbjct: 59 MDGFTFIKIVREQEAYKDTPIVVLSTEGQEKDIQQGMNLGANLYLVKPAQPEKM 112
>gi|225448707|ref|XP_002280746.1| PREDICTED: two-component response regulator ARR17 [Vitis vinifera]
Length = 153
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL----------KGRPRNIDLILT 83
VL V+ + R+++ LL+ S RVT +GL+A E L K ++LI+T
Sbjct: 23 VLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGLGDNQQTSHKASVSKVNLIIT 82
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL V + I K +PV++MSS++ + + KC+ GA +++KP++++++
Sbjct: 83 DYCMPGMTGYELLKRVKQSSILKEVPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSDV 142
Query: 144 RNLWQHVWRR 153
+ L ++ R
Sbjct: 143 KKLRCYLKHR 152
>gi|162459272|ref|NP_001104857.1| LOC541632 [Zea mays]
gi|12060388|dbj|BAB20581.1| response regulator 6 [Zea mays]
Length = 235
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 90/173 (52%), Gaps = 21/173 (12%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN-------------- 77
VL V+ R+++ LL+ SS++VT V G KA + L ++
Sbjct: 42 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVA 101
Query: 78 ------IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAA 131
++LI+T+ +P ++G+ LL + E ++IPV++MSS++ S + +C+ GA
Sbjct: 102 ANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGAD 161
Query: 132 DYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASN 184
++ +KPVR +++ L H+ + + + ++ D G+++ S +D+ +N
Sbjct: 162 EFFLKPVRLSDMNKLKPHILKSRCNQ-EQHQQSDSHSGERRNPTISSSDSINN 213
>gi|15239829|ref|NP_199735.1| putative two-component response regulator-like APRR4 [Arabidopsis
thaliana]
gi|52783215|sp|Q9FJ16.1|APRR4_ARATH RecName: Full=Putative two-component response regulator-like APRR4;
AltName: Full=Pseudo-response regulator 4
gi|10177153|dbj|BAB10342.1| unnamed protein product [Arabidopsis thaliana]
gi|332008405|gb|AED95788.1| putative two-component response regulator-like APRR4 [Arabidopsis
thaliana]
Length = 292
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVL+ + D S I+ L+K Y+VT + KA L+ DL + +V+
Sbjct: 41 GLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEG 100
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
F L+ + ++P+I++S DSV +V K M+ GAADYL+KP+R +LR +++H+
Sbjct: 101 DIFRFLSEIGSE---MDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHL 157
Query: 151 ---WRRQSSMVSG 160
R + S+V+G
Sbjct: 158 VKKMRERRSVVTG 170
>gi|308273196|emb|CBX29799.1| Chemotaxis protein cheY [uncultured Desulfobacterium sp.]
Length = 144
Score = 73.2 bits (178), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 84/142 (59%), Gaps = 5/142 (3%)
Query: 29 RMALRVLLVEADDSTRQIVTALLRKSSYRVT---AVPDGLKAWEVLKGRPRNIDLILTEV 85
+MA VL+V+ S R ++ +++ S + V DG++A ++L IDL+L+++
Sbjct: 2 KMAFNVLIVDDSSSMRAVIKKIIKVSGFNVGNYFEAEDGIEALKILDNDW--IDLVLSDI 59
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
++P++ G + L+ + ++E+ +IPV+M++++ S + + + + GA+ Y+ KP +++N
Sbjct: 60 NMPNMDGMSFLSEMKKNELFSSIPVVMITTEGSETKILESIKLGASGYIKKPFFPADIKN 119
Query: 146 LWQHVWRRQSSMVSGNETQDES 167
+ + S V GN+ DE+
Sbjct: 120 TLSKLMEEEVSDVRGNDDGDEA 141
>gi|388507854|gb|AFK41993.1| unknown [Lotus japonicus]
Length = 209
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 75/130 (57%), Gaps = 10/130 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL--KGRPRN--------IDLI 81
L VL V+ R+++ LL+ SS +VT V G +A + L G + ++LI
Sbjct: 20 LHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEENSSIGFDGVKVNLI 79
Query: 82 LTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
+T+ +P ++G+ LL + E + IPV++MSS++ ++ + +C+ GA D+L+KPV+ +
Sbjct: 80 MTDYSMPGMTGYELLKKIKESSAFREIPVVVMSSENILTRIDRCLEEGAEDFLLKPVKLS 139
Query: 142 ELRNLWQHVW 151
++R L +
Sbjct: 140 DVRRLRDFIM 149
>gi|297739924|emb|CBI30106.3| unnamed protein product [Vitis vinifera]
Length = 157
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 75/134 (55%), Gaps = 19/134 (14%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN---------------- 77
++ DDS R+++ LL+ SSY+VT V G KA E L G N
Sbjct: 11 VLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFL-GLHENDPNTPSVSPNSHQEVE 69
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++LI+T+ +P ++G+ LL + E +NIPV++MSS++ S + +C+ GA ++ +KP
Sbjct: 70 VNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEEFFLKP 129
Query: 138 VRRNELRNLWQHVW 151
V+ +++ L H+
Sbjct: 130 VQISDVNRLKPHMM 143
>gi|85860826|ref|YP_463028.1| response regulator [Syntrophus aciditrophicus SB]
gi|85723917|gb|ABC78860.1| response regulator with sigma 54 interaction domain [Syntrophus
aciditrophicus SB]
Length = 502
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
+VL+V+ + + R ++ A+L+K Y+V DGL+A E L+ ID+++T++ +P +SG
Sbjct: 3 KVLIVDDELNMRVVLQAMLKKKGYQVAQAADGLEALECLE--KEQIDVVVTDLKMPKLSG 60
Query: 93 FALLTLVMEH--EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
LL EH PVI++++ ++ T + +GA DY+ KP R+EL ++ +
Sbjct: 61 LGLL----EHVTSTYPETPVIIITAHGTIETAVDALKKGAFDYITKPFDRDELISVIEKA 116
Query: 151 WR 152
R
Sbjct: 117 IR 118
>gi|145353312|ref|XP_001420962.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357451|ref|XP_001422932.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581198|gb|ABO99255.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583176|gb|ABP01291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 578
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 14/130 (10%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR------NIDLILTEV 85
LRVLL D TR++V ++LR+ V A +G + +VL+G P+ ++D+IL +V
Sbjct: 52 LRVLLATDDAHTRKMVESMLRELGVEVVAATNGNEVLDVLRGAPKSAREDTSVDMILLDV 111
Query: 86 DLPSISG-FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMR----GAADYLVKPVRR 140
+P + G L+ +E + +P+++MS+ D C R GAA +L KPV R
Sbjct: 112 LMPELDGEVELVEACKANETLRGVPIVIMSTVDERKA---CKTRFENSGAAGFLTKPVNR 168
Query: 141 NELRNLWQHV 150
EL+ H
Sbjct: 169 IELKESLAHT 178
>gi|303247352|ref|ZP_07333625.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
gi|302491266|gb|EFL51155.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
Length = 122
Score = 73.2 bits (178), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M +L+V+ + R +V ++RK ++VTA DGL E L P+ +DLI+T++++P
Sbjct: 1 MPKHILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKLYTDPQ-VDLIITDINMPR 59
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+ G + V E + ++IP++++S++ ++ + GA Y+VKP +
Sbjct: 60 MDGITFIKTVREQDAYRDIPIVVLSTEGEERDIHAGLSIGANLYMVKPAQ 109
>gi|33330864|gb|AAQ10675.1| type-A response regulator [Catharanthus roseus]
Length = 254
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL--KGRPRNI-------DLIL 82
L VL V+ R+++ LL+ S +VTAV G +A + L G + +LIL
Sbjct: 14 LHVLAVDDSLVDRKVIERLLKISCCKVTAVESGRRALQYLGLDGEKSTVGFDGLKVNLIL 73
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + K IPV++MSS++ ++ + +C+ GA ++LVKPV+ ++
Sbjct: 74 TDYSMPGMTGYELLKKIKGSSTLKEIPVVIMSSENILTRIDRCLEEGAEEFLVKPVKLSD 133
Query: 143 LRNLWQHVWR 152
++ + V +
Sbjct: 134 VKRIKDFVLK 143
>gi|351724591|ref|NP_001236551.1| uncharacterized protein LOC100499827 [Glycine max]
gi|255626955|gb|ACU13822.1| unknown [Glycine max]
Length = 146
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 76/123 (61%), Gaps = 11/123 (8%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL----------KGRPRNIDLILT 83
VL V+ + R++V LLR SS +VT +G +A E+L GR + +++I+T
Sbjct: 19 VLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNNMNGRSK-VNMIIT 77
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + E + K +PV++MSS++ + + KC+ GA +++KP++++++
Sbjct: 78 DYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSDV 137
Query: 144 RNL 146
R L
Sbjct: 138 RKL 140
>gi|224120138|ref|XP_002318254.1| type-b response regulator [Populus trichocarpa]
gi|222858927|gb|EEE96474.1| type-b response regulator [Populus trichocarpa]
Length = 658
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 24/220 (10%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYR--------VTAVPDGLKAWEVLKGRPRNIDLILT 83
+ +L+V+ D ++ +V+A L+ SY+ V V A +L+ + DL+++
Sbjct: 17 IHILIVDDDSTSLSVVSATLKTVSYKDNRNLELIVVTVKKPFDALSILRLKKGLFDLVVS 76
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
++ +P ++G L V E E +PVI+MSS +S + + + + GAA Y+VKP + +L
Sbjct: 77 DLHMPEMNGMELQKQV-EEEF--KLPVIIMSSDESKNVISRSLEGGAAFYIVKPANKVDL 133
Query: 144 RNLWQH-VWRRQSSMVSGNE---TQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEF 199
+N+W + V + + +S E +++ S +E S D S S I + +
Sbjct: 134 KNVWHYAVAIKTGNSLSIKEIEGSREPSYSSTLVERLSLEDVNSATS------INDEKRY 187
Query: 200 IEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQN 239
+ G E+ TK D E +S P + +W SL N
Sbjct: 188 RKNGRKEERKSTKDDQEVDSQPASKKPKV---VWTNSLHN 224
>gi|297612639|ref|NP_001066118.2| Os12g0139400 [Oryza sativa Japonica Group]
gi|87116390|dbj|BAE79354.1| typeA response regulator 10 [Oryza sativa Japonica Group]
gi|108862172|gb|ABA96406.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|118790800|tpd|FAA00261.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218186409|gb|EEC68836.1| hypothetical protein OsI_37415 [Oryza sativa Indica Group]
gi|222616614|gb|EEE52746.1| hypothetical protein OsJ_35177 [Oryza sativa Japonica Group]
gi|255670034|dbj|BAF29137.2| Os12g0139400 [Oryza sativa Japonica Group]
Length = 201
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL--------------KGRPRN 77
VL V+ R+++ LL+ SS++VT V G KA E L +
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVG 68
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++LI+T+ +P ++G+ LL + E ++IPV++MSS + S + +C+ GA ++ +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKP 128
Query: 138 VRRNELRNLWQHVWR 152
VR +++ L H+ +
Sbjct: 129 VRLSDMSKLKPHILK 143
>gi|350553470|ref|ZP_08922644.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Thiorhodospira sibirica ATCC
700588]
gi|349790555|gb|EGZ44463.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Thiorhodospira sibirica ATCC
700588]
Length = 699
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLV+ D + R +V A L++ YRV G++A E ++ P +DL+L +V +P ISGF
Sbjct: 12 LLLVDDDPTLRLLVAAGLQQQGYRVIQAEQGVQALEQIRAHP--VDLVLLDVMMPGISGF 69
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
+L + +++PV+M++ D V++V + GA D++ KP+
Sbjct: 70 EVLRTLRALTGHEHLPVLMLTGADDVASVNEAFEAGATDFITKPI 114
>gi|334117422|ref|ZP_08491513.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
gi|333460531|gb|EGK89139.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
Length = 352
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ ++ R ++ L++ + VT DGL+A E+L+ P DL+L ++ +P ++G+
Sbjct: 8 VLVVDDNEVNRDLLARRLQRQGHVVTVAEDGLQALEMLRSDP--FDLVLLDIMMPQMNGY 65
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
+L + E + IPVIM+S+ D + ++ +C+ GA DYL KP
Sbjct: 66 QVLESLKADENLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|374606279|ref|ZP_09679163.1| response regulator receiver protein [Paenibacillus dendritiformis
C454]
gi|374388110|gb|EHQ59548.1| response regulator receiver protein [Paenibacillus dendritiformis
C454]
Length = 265
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Query: 10 ELKEMNGNEGIAKWETFLQRM-ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAW 68
ELK M+G GI L+ A ++L+V+ DDS R+ + L+ Y V A D + A
Sbjct: 125 ELKTMDGTAGICVLHDELEAPDAKKILIVDHDDSVREFLQIQLKLQGYEVHAAIDAITAL 184
Query: 69 EVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMR 128
+++ R DLI+TE++L ++G ++ + + E+ K ++++S Q ST+ C +
Sbjct: 185 DLI--RKEGYDLIVTELNLYGLNGLPFISQIQKMELAKEPKIVILSEQRVGSTIEHCFQQ 242
Query: 129 GAADYLVKP 137
G +DY+ KP
Sbjct: 243 GVSDYITKP 251
>gi|443302653|gb|AGC82268.1| cAMP phosphodiesterase [Dictyostelium lacteum]
Length = 698
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 16/135 (11%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
RV ++ ADD R+I+ +L+K Y V +G +AWE L+ DL+LT+V +P I
Sbjct: 87 RVHILVADDDVIQRKILENVLKKFHYNVH---NGEEAWECLEKGQVKYDLVLTDVMMPEI 143
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKC----MMRGAADYLVKPVRRNELRN- 145
+GF L T + H + IPVI+MS + YKC + G D+L KP+ + L+
Sbjct: 144 NGFDLCTKINLHPVFNKIPVILMS---GTAVDYKCANDTIKIGGQDFLTKPIAKELLKKK 200
Query: 146 ---LWQHVWRRQSSM 157
L +W+++ M
Sbjct: 201 IDTLLGSIWQKKKEM 215
>gi|115484121|ref|NP_001065722.1| Os11g0143300 [Oryza sativa Japonica Group]
gi|71273491|emb|CAI79413.1| Type A response regulator 9 [Oryza sativa Indica Group]
gi|87116388|dbj|BAE79353.1| typeA response regulator 9 [Oryza sativa Japonica Group]
gi|108863989|gb|ABA91415.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|113644426|dbj|BAF27567.1| Os11g0143300 [Oryza sativa Japonica Group]
gi|118790795|tpd|FAA00260.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215765046|dbj|BAG86743.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185231|gb|EEC67658.1| hypothetical protein OsI_35072 [Oryza sativa Indica Group]
gi|222615502|gb|EEE51634.1| hypothetical protein OsJ_32929 [Oryza sativa Japonica Group]
Length = 201
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 14/135 (10%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL-----KGRPRN--------- 77
VL V+ R+++ LL+ SS++VT V G KA E L + P +
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVA 68
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++LI+T+ +P ++G+ LL + E ++IPV++MSS + S + +C+ GA ++ +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKP 128
Query: 138 VRRNELRNLWQHVWR 152
VR +++ L H+ +
Sbjct: 129 VRLSDMSKLKPHILK 143
>gi|388492124|gb|AFK34128.1| unknown [Lotus japonicus]
gi|388498306|gb|AFK37219.1| unknown [Lotus japonicus]
Length = 207
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 76/131 (58%), Gaps = 10/131 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL--KGRPRNI-------DLIL 82
L VL V+ R+++ LLR SS +VT V G +A + L G +I +LI+
Sbjct: 20 LHVLAVDDSHVDRKVIERLLRISSCKVTVVDSGTRALQYLGLDGEKSSIGLDSVKVNLIM 79
Query: 83 TEVDLPSISGFALLTLV-MEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
T+ +P ++G+ LL + E + + IPV++MSS++ ++ + C+ GA D+L+KPV+ +
Sbjct: 80 TDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSENILTRIDSCLEEGAEDFLLKPVKLS 139
Query: 142 ELRNLWQHVWR 152
+++ L + R
Sbjct: 140 DVKRLTDFIMR 150
>gi|94987584|ref|YP_595517.1| CheY-like receiver [Lawsonia intracellularis PHE/MN1-00]
gi|442556438|ref|YP_007366263.1| response regulator receiver protein [Lawsonia intracellularis N343]
gi|94731833|emb|CAJ55196.1| CheY-like receiver [Lawsonia intracellularis PHE/MN1-00]
gi|441493885|gb|AGC50579.1| response regulator receiver protein [Lawsonia intracellularis N343]
Length = 122
Score = 72.4 bits (176), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M+ +L+V+ + R +++ + + Y+VT DGL E L + +DLI++++++P
Sbjct: 1 MSKHILVVDDSKTVRNLMSFVFKSKGYQVTTAEDGLDGLEKLYSVDK-VDLIVSDINMPR 59
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL-RNL 146
+ GF + V E ++ +NIP+I++S++ + K M GA Y+VKP + + L RN+
Sbjct: 60 MDGFTFIKSVREQDLYRNIPIIILSTEKEDEDIKKGMKFGANLYMVKPAQPDTLVRNI 117
>gi|346703374|emb|CBX25471.1| hypothetical_protein [Oryza glaberrima]
Length = 201
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 14/135 (10%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL-----KGRPRN--------- 77
VL V+ R+++ LL+ SS++VT V G KA E L + P +
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVA 68
Query: 78 IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++LI+T+ +P ++G+ LL + E ++IPV++MSS + S + +C+ GA ++ +KP
Sbjct: 69 VNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKP 128
Query: 138 VRRNELRNLWQHVWR 152
VR +++ L H+ +
Sbjct: 129 VRLSDMSKLKPHILK 143
>gi|307152410|ref|YP_003887794.1| multi-sensor signal transduction histidine kinase [Cyanothece sp.
PCC 7822]
gi|306982638|gb|ADN14519.1| multi-sensor signal transduction histidine kinase [Cyanothece sp.
PCC 7822]
Length = 1382
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 15/165 (9%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R++L + + R+ V LL K Y+V AV DG+ A E ++ P DL+LT+V +P ++G
Sbjct: 630 RIILADDNADMREYVKRLLNKL-YQVEAVGDGMAALEAIRRHPP--DLVLTDVMMPQLNG 686
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
F LL + + + + +P+I++S++ + + + GA DYLVKP EL + R
Sbjct: 687 FELLQQLRSNPLTQELPIILLSARAGEEYLVEALEAGADDYLVKPFSAREL------LVR 740
Query: 153 RQSSMVSGNETQDESVGQQKIEATSEN------DAASNHSSGYMA 191
++++ Q + +QK+ A +E D + G++A
Sbjct: 741 IEANLKMAQLRQQATQKEQKLRAQAETARQQTIDILERITEGFVA 785
>gi|404493789|ref|YP_006717895.1| sigma-54-dependent transcriptional response regulator PilR
[Pelobacter carbinolicus DSM 2380]
gi|77545822|gb|ABA89384.1| sigma-54-dependent transcriptional response regulator PilR
[Pelobacter carbinolicus DSM 2380]
Length = 492
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 4/121 (3%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+L+V+ ++S R+ + LL++ Y V AV DG +A LK +N DLI++++ +P + G
Sbjct: 29 RILVVDDEESMREFLCILLKRDGYLVDAVSDGQQAVACLK--EQNYDLIISDIKMPRLDG 86
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
F LL V E + +IM+++ + M +GA DY+ KP + E+R + ++
Sbjct: 87 FGLLDHVKER--FASTAMIMITAFSTAEQAVDAMKKGAYDYITKPFKNEEIRLVVENALE 144
Query: 153 R 153
R
Sbjct: 145 R 145
>gi|357486271|ref|XP_003613423.1| Two-component response regulator ARR3 [Medicago truncatula]
gi|355514758|gb|AES96381.1| Two-component response regulator ARR3 [Medicago truncatula]
Length = 237
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 97/186 (52%), Gaps = 28/186 (15%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN-------------IDL 80
++ DDS R+++ LL+ S+ +VTAV G++A + L +DL
Sbjct: 18 VLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLVDEKETSESDAFVPGLKVDL 77
Query: 81 ILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRR 140
++T+ +P ++G+ LL + E + IPV++MSS++ + + +C+ GA D++VKPV+
Sbjct: 78 VITDYCMPGMTGYELLKKIKESTTFRAIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKL 137
Query: 141 NELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAAS-NHSSGYMACIQSKGEF 199
++++ L ++ T++ +VG Q E N+ + N G I +K +
Sbjct: 138 SDVKRLKGYMT-----------TKEVNVGSQDTEVIVTNNVGNDNDGDGVGIGINNKRK- 185
Query: 200 IEKGSD 205
+E+ SD
Sbjct: 186 LEEASD 191
>gi|115458564|ref|NP_001052882.1| Os04g0442300 [Oryza sativa Japonica Group]
gi|87116392|dbj|BAE79355.1| typeA response regulator 1 [Oryza sativa Japonica Group]
gi|113564453|dbj|BAF14796.1| Os04g0442300 [Oryza sativa Japonica Group]
gi|118790814|tpd|FAA00263.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215704280|dbj|BAG93120.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740726|dbj|BAG97382.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 231
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 29 RMALRVLLVEADDSTRQIVTALLRKS----SYRVTAVPDGLKAWEVL----KGRPRNIDL 80
R RVLLV+ R++V LL S S+ V AV KA E L +G+ + ID+
Sbjct: 5 RGVTRVLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQAIDM 64
Query: 81 ILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRR 140
+LT+ +P ++G+ LL + K IPVI+MSS++ + +CM GA D++VKP++
Sbjct: 65 VLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQS 124
Query: 141 NELRNL 146
+++ L
Sbjct: 125 KDVQRL 130
>gi|239907979|ref|YP_002954720.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
gi|239797845|dbj|BAH76834.1| chemotaxis protein CheY [Desulfovibrio magneticus RS-1]
Length = 122
Score = 72.4 bits (176), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M +L+V+ + R +V ++RK ++VTA DGL E L + +DLI+T++++P
Sbjct: 1 MPKHILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKLY-TDQQVDLIITDINMPR 59
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+ G + V E +I ++IP++++S++ ++ + GA Y+VKP +
Sbjct: 60 MDGITFIKTVREQDIYRDIPIVVLSTEGEERDIHAGLSIGANLYMVKPAQ 109
>gi|297842233|ref|XP_002888998.1| hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp.
lyrata]
gi|297334839|gb|EFH65257.1| hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKG---------RPRNIDLIL 82
L VL V+ R+++ LL+ S+ +VT V G +A + L + ++LI+
Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDHGSSGLKDLKVNLIV 77
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + IPV++MSS++ + +CM+ GA D+L+KPV+ +
Sbjct: 78 TDYSMPGLTGYELLKKIKESSAFREIPVVIMSSENIQPRIEQCMIEGAEDFLLKPVKLAD 137
Query: 143 LRNLWQHVWR 152
++ L + + R
Sbjct: 138 VKRLKELIMR 147
>gi|356562781|ref|XP_003549647.1| PREDICTED: two-component response regulator ARR5-like isoform 2
[Glycine max]
Length = 213
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 76/137 (55%), Gaps = 16/137 (11%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN-------------- 77
L VL V+ R+++ LL+ SS +VT V G +A + L N
Sbjct: 26 LHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLEGENGSLGCLFDWLWLQS 85
Query: 78 --IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++LI+T+ +P ++G+ LL + E + + IPV++MSS++ ++ + +C+ GA D+L+
Sbjct: 86 VKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLL 145
Query: 136 KPVRRNELRNLWQHVWR 152
KPV+ +++R L + +
Sbjct: 146 KPVKLSDVRRLKDFIMK 162
>gi|422302232|ref|ZP_16389595.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa PCC
9806]
gi|389788595|emb|CCI15630.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa PCC
9806]
Length = 1037
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
RVL+V+ + R+++ L K+ YR+ DGL+AWE L+ DLIL ++++P ++G
Sbjct: 907 RVLIVDDSVTVREMLAISLVKAGYRIEKARDGLEAWEKLQA-GLACDLILCDIEMPRLNG 965
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
LL+ + E E + IPV M++S+ S + +GA Y VKP + L + Q +
Sbjct: 966 LELLSRLQEDEQLQGIPVAMITSRGSQKMQHLAAAKGAKGYFVKPYIEDVLLSAAQRL 1023
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + ++++ K+ YRV DG +AWE L+G D++ ++++P ++G
Sbjct: 752 VLIVDDSITVLELLSLSFSKAGYRVEQARDGQEAWEKLRG-GLPCDIVFCDIEMPRMNGL 810
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
LL + + +IPV +++S+ + GA+ Y KP +L
Sbjct: 811 ELLYNLRKDPRLASIPVALLTSRGAERHRQVAATLGASGYFTKPYTERDL 860
>gi|195622036|gb|ACG32848.1| RR10 - Corn type-A response regulator [Zea mays]
Length = 204
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 20/141 (14%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN-------------- 77
VL V+ R+++ LL+ SS++VT V G KA + L ++
Sbjct: 10 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQDSTVPPVHTHQLDVA 69
Query: 78 ------IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAA 131
++LI+T+ +P ++G+ LL + E ++IPV++MSS++ S + +C+ GA
Sbjct: 70 ANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGAD 129
Query: 132 DYLVKPVRRNELRNLWQHVWR 152
++ +KPVR +++ L H+ +
Sbjct: 130 EFFLKPVRLSDMNKLKPHILK 150
>gi|71273475|emb|CAI79405.1| Type A response regulator 1 [Oryza sativa Indica Group]
gi|218194921|gb|EEC77348.1| hypothetical protein OsI_16028 [Oryza sativa Indica Group]
Length = 231
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 29 RMALRVLLVEADDSTRQIVTALLRKS----SYRVTAVPDGLKAWEVL----KGRPRNIDL 80
R RVLLV+ R++V LL S S+ V AV KA E L +G+ + ID+
Sbjct: 5 RGVTRVLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGLKEEGKEQAIDM 64
Query: 81 ILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRR 140
+LT+ +P ++G+ LL + K IPVI+MSS++ + +CM GA D++VKP++
Sbjct: 65 VLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQS 124
Query: 141 NELRNL 146
+++ L
Sbjct: 125 KDVQRL 130
>gi|149919982|ref|ZP_01908457.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
gi|149819255|gb|EDM78689.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
Length = 513
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN-IDLILTEVDLPSIS 91
RVL+V+ + + R+++ ALL + Y V PDG A +K PR D++++++ +P++
Sbjct: 7 RVLVVDDEPNLRKVLGALLMQLGYEVLTEPDGASALARVKSAPRGTFDVVISDLRMPNMD 66
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
G ALL + + ++PVI++++ +V T + + +GA D+L KP R+++ +L
Sbjct: 67 GMALLEALTAED--SSLPVIILTAHGTVDTAVQAVKKGAFDFLEKPFERDQIDHLVSKAV 124
Query: 152 RRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACI 193
+ + E E V S +AA + G +
Sbjct: 125 KTRRLAGPSAEPSYELVPAAATPEASSGEAAQPEAGGQFGMV 166
>gi|297736479|emb|CBI25350.3| unnamed protein product [Vitis vinifera]
Length = 141
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL----------KGRPRNIDLILT 83
VL V+ + R+++ LL+ S RVT +GL+A E L K ++LI+T
Sbjct: 11 VLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGLGDNQQTSHKASVSKVNLIIT 70
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL V + I K +PV++MSS++ + + KC+ GA +++KP++++++
Sbjct: 71 DYCMPGMTGYELLKRVKQSSILKEVPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSDV 130
Query: 144 RNLWQHVWRR 153
+ L ++ R
Sbjct: 131 KKLRCYLKHR 140
>gi|195651747|gb|ACG45341.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 238
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRK----SSYRVTAVPDGLKAWEVLK----GRPRNIDLILT 83
+RVLLV+ R++ LL S+ V AV KA E L G+ + ID++LT
Sbjct: 12 MRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDGGKEQAIDMVLT 71
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + K IPVI+MSS+D + +C+ GA D++VKP++ ++
Sbjct: 72 DYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISRCLNAGAEDFIVKPLQSKDV 131
Query: 144 RNL 146
+ L
Sbjct: 132 QRL 134
>gi|449437731|ref|XP_004136644.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 226
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 26/143 (18%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL----KGRPR------------- 76
++ DDS R+++ LL+ SSY+VT V G KA E L + +P
Sbjct: 11 VLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIQEHQPTNFKSSSNSSFSSP 70
Query: 77 -------NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRG 129
++LI+T+ +P ++GF LL V E +NIPV++MSS++ S + +C+ G
Sbjct: 71 NNHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENVPSRINRCLEEG 130
Query: 130 AADYLVKPVRRNELRNLWQHVWR 152
A ++ +KPVR ++ L H+ +
Sbjct: 131 AEEFFLKPVRLCDVNKLKPHMMK 153
>gi|385811128|ref|YP_005847524.1| response regulator [Ignavibacterium album JCM 16511]
gi|383803176|gb|AFH50256.1| Response regulator [Ignavibacterium album JCM 16511]
Length = 116
Score = 72.0 bits (175), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Query: 39 ADDS--TRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-NIDLILTEVDLPSISGFAL 95
ADDS R+++T L Y + +V DG++A E+L PR NIDL++T++++P++ GF L
Sbjct: 3 ADDSPIIRKLITFSLSVKGYEIISVSDGMEALEML---PRENIDLLITDLNMPNVDGFEL 59
Query: 96 LTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ + E++ KN P+I++S+ + + + GA YL+KP + +
Sbjct: 60 IKAIRENDDLKNTPIIVLSNLSETGDIERALHYGADSYLIKPFEQKTI 107
>gi|356516718|ref|XP_003527040.1| PREDICTED: two-component response regulator ARR6-like [Glycine max]
Length = 204
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 76/130 (58%), Gaps = 9/130 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL--KGRPRNI-------DLIL 82
L VL V+ R+++ LL+ SS +VT V G +A + L G +I +LI+
Sbjct: 21 LHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGFDSVDVNLIM 80
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + + +PV++MSS++ ++ + C+ GA ++L+KPV+ ++
Sbjct: 81 TDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSD 140
Query: 143 LRNLWQHVWR 152
++ + + R
Sbjct: 141 VKRVTDFIMR 150
>gi|356501005|ref|XP_003519320.1| PREDICTED: two-component response regulator ARR3-like [Glycine max]
Length = 240
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 78/132 (59%), Gaps = 15/132 (11%)
Query: 34 VLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-------------NI 78
V ++ DDS R+++ LL+ S+ +VTAV G++A + L + +
Sbjct: 20 VHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESDGFVPDLKV 79
Query: 79 DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
DLI+T+ +P ++G+ LL + E + + IPV++MSS++ + + +C+ GA D++VKPV
Sbjct: 80 DLIITDYCMPEMTGYELLKKIKESTMFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPV 139
Query: 139 RRNELRNLWQHV 150
+ ++++ L ++
Sbjct: 140 KLSDVKRLKGYM 151
>gi|428319185|ref|YP_007117067.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
gi|428242865|gb|AFZ08651.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
Length = 352
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ ++ R ++ L++ + VT DGL+A E+L+ P DL+L ++ +P ++G+
Sbjct: 8 VLVVDDNEVNRDLLARRLQRQGHVVTVAEDGLQALEMLRRDP--FDLVLLDIMMPQMNGY 65
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
+L + E + IPVIM+S+ D + ++ +C+ GA DYL KP
Sbjct: 66 QVLESLKADENLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|391231317|ref|ZP_10267523.1| serine phosphatase RsbU, regulator of sigma subunit [Opitutaceae
bacterium TAV1]
gi|391220978|gb|EIP99398.1| serine phosphatase RsbU, regulator of sigma subunit [Opitutaceae
bacterium TAV1]
Length = 502
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+L+V+ ++ R +++ L + + V DG A E L+ P DL+L ++ +P + G
Sbjct: 118 RILVVDDNEGNRDMLSRQLERQGHAVATAADGQAALERLRAGP--FDLVLLDMMMPVLDG 175
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+ L + + +++PVIM+S+ D +++V +C+ RGA D+L KP LR
Sbjct: 176 YGALDAIKTDPVLRHLPVIMISALDELASVVRCIERGAEDFLPKPFNPTLLR 227
>gi|425456808|ref|ZP_18836514.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa PCC
9807]
gi|389801999|emb|CCI18895.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa PCC
9807]
Length = 1037
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
RVL+V+ + R+++ L K+ YR+ DGL+AWE L+ DLIL ++++P ++G
Sbjct: 907 RVLIVDDSVTVREMLAISLVKAGYRIEKARDGLEAWEKLQA-GLACDLILCDIEMPRLNG 965
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
LL+ + E E + IPV M++S+ S + +GA Y VKP
Sbjct: 966 LELLSRLQEDEQLQGIPVAMITSRGSQKMQHLAAAKGAKGYFVKP 1010
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + ++++ K+ YRV DG +AWE L+G D++ ++++P ++G
Sbjct: 752 VLIVDDSITVLELLSLSFSKAGYRVEQARDGQEAWEKLRG-GLPCDIVFCDIEMPRMNGL 810
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
LL + + +IPV +++S+ + GA+ Y KP +L
Sbjct: 811 ELLYNLQKDPRLASIPVALLTSRGAERHRQVAATLGASGYFTKPYTERDL 860
>gi|425446678|ref|ZP_18826680.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa PCC
9443]
gi|389732997|emb|CCI03180.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa PCC
9443]
Length = 1037
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
F + RVL+V+ + R+++ L K+ YR+ DGL+AWE L+ DLIL ++
Sbjct: 900 FFAQSTPRVLIVDDSVTAREMLAISLVKAGYRIEKARDGLEAWEKLRA-GLACDLILCDL 958
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
++P ++G LL+ + E E + IPV M++S+ S + +GA Y VKP + L +
Sbjct: 959 EMPRLNGLELLSRLQEDEQLQGIPVAMITSRGSQKMQHLAAAKGAKGYFVKPYIEDVLLS 1018
Query: 146 LWQHV 150
Q +
Sbjct: 1019 AAQRL 1023
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + ++++ K+ YRV DG +AWE L+G D++ ++++P ++G
Sbjct: 752 VLIVDDSITVLELLSLSFSKAGYRVEQARDGQEAWEKLRG-GLPCDIVFCDIEMPRMNGL 810
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
LL + + +IPV +++S+ + GA+ Y KP +L
Sbjct: 811 ELLYNLRKDPRLASIPVALLTSRGAERHRQVAATLGASGYFTKPYTERDL 860
>gi|310818979|ref|YP_003951337.1| Sigma-54 dependent DNA-binding response regulator FrgC [Stigmatella
aurantiaca DW4/3-1]
gi|309392051|gb|ADO69510.1| Sigma-54 dependent DNA-binding response regulator FrgC [Stigmatella
aurantiaca DW4/3-1]
Length = 464
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VLLVE D + +++ ALL ++ V G +A +L+ P ID+++++V +P +SG
Sbjct: 9 VLLVEDDRAVAKVLGALLTQAGLTVHTAWSGEEALTLLRQMP--IDVVVSDVRMPGMSGM 66
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE-LRNLWQHVWR 152
LLT V C +PV++M++ +V + M GAAD+++KP R E L L + + R
Sbjct: 67 ELLTEVTRS--CPEVPVVLMTAHGTVPMAVEAMRAGAADFILKPFDRQEILFTLRKTLLR 124
Query: 153 RQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGE 198
Q VG+ A +E +A ++ A + +GE
Sbjct: 125 AQGEPPPAVLRTGAFVGRSA--AMAEVEALLTRAAAGTATVLLRGE 168
>gi|451946772|ref|YP_007467367.1| serine phosphatase RsbU, regulator of sigma subunit [Desulfocapsa
sulfexigens DSM 10523]
gi|451906120|gb|AGF77714.1| serine phosphatase RsbU, regulator of sigma subunit [Desulfocapsa
sulfexigens DSM 10523]
Length = 396
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN-IDLILTEVDLPSISG 92
VL+V+ ++ + ++ A LR Y V DG++A +V RN +DLIL ++ +P + G
Sbjct: 10 VLVVDDSEAIQTLLKAYLRDGGYNVMGAVDGVEALDVCL---RNSVDLILLDIAMPKMDG 66
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
F+L + + + IPVIM+S+++ +++ + GA DY+ KPV R EL
Sbjct: 67 FSLCERLQSEKRLRAIPVIMLSAREDMASKMRSFELGAVDYITKPVGRGEL 117
>gi|166366868|ref|YP_001659141.1| two-component hybrid sensor and regulator [Microcystis aeruginosa
NIES-843]
gi|166089241|dbj|BAG03949.1| two-component hybrid sensor and regulator [Microcystis aeruginosa
NIES-843]
Length = 1002
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
F + RVL+V+ + R+++ L K+ YR+ DGL+AWE L+ DLIL ++
Sbjct: 865 FFAQSTPRVLIVDDSVTAREMLAISLVKAGYRIEEARDGLEAWEKLRA-GLACDLILCDL 923
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++P ++G LL+ + E E + IPV M++S+ S + +GA Y VKP
Sbjct: 924 EMPRLNGLELLSRLQEDEQLQGIPVAMITSRGSQKMQHLAAAKGAKGYFVKP 975
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 28 QRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDL 87
Q+ VL+V+ + R +++ K+ YRV DG +AWE L+G D++ ++++
Sbjct: 711 QKSGAMVLIVDDSITVRGLLSLSFSKAGYRVEQARDGQEAWEKLRG-GLPCDIVFCDIEM 769
Query: 88 PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
P ++G LL + + +IPV +++S+ + GA+ Y KP +L
Sbjct: 770 PRMNGLELLYNLQKDPRLASIPVALLTSRGAERHRQVAATLGASGYFTKPYTERDL 825
>gi|148608693|gb|ABQ95670.1| type A response regulator, partial [Malus x domestica]
Length = 194
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 18/138 (13%)
Query: 39 ADDS--TRQIVTALLRKSSYRVTAVPDGLKAWEVL--KGRP-------RNIDLILTEVDL 87
DDS R+++ LL+ SS +VTAV G +A E L G ++LI+T+ +
Sbjct: 5 VDDSHVDRKVIERLLKISSCKVTAVDSGTRALEYLGLDGEKSSVGFDNMKVNLIITDYSM 64
Query: 88 PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLW 147
P ++G+ LL + E + +PV++MSS++ ++ + +C+ GA +Y+VKPV+ ++
Sbjct: 65 PGMTGYELLKKIKESSAFREVPVVIMSSENILTRIDRCLEEGAEEYIVKPVKLSD----- 119
Query: 148 QHVWRRQSSMVSGNETQD 165
V R ++ M+ G E ++
Sbjct: 120 --VNRLKNFMMGGGERKE 135
>gi|428217824|ref|YP_007102289.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena sp. PCC 7367]
gi|427989606|gb|AFY69861.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena sp. PCC 7367]
Length = 334
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Query: 34 VLLVEADDSTRQIVTA-LLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
+L+V+ ++ R ++ L+R+ ++ A +G +A E+L G N DLIL ++ +P ++G
Sbjct: 9 LLIVDDNEMNRDVLRRHLVRQGYQQILAAENGKEALEMLSGH--NFDLILLDIQMPQMNG 66
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
+ LL + +IPVIM+S+ D + +V +C+ GA DYL KP R L+
Sbjct: 67 YELLAYLKADLKLSHIPVIMISAVDEIDSVVRCIEMGAEDYLHKPFNRVLLKA------- 119
Query: 153 RQSSMVSGNETQD-ESVGQQKIEATSENDAASN 184
R S+ + +D E + +Q++E ++ A N
Sbjct: 120 RTSACLEKKRLRDQEEIYRQQLEEANKKLAEVN 152
>gi|425464406|ref|ZP_18843719.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa
PCC 9809]
gi|389833601|emb|CCI21740.1| Two-component hybrid sensor and regulator [Microcystis aeruginosa
PCC 9809]
Length = 1003
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
F + RVL+V+ + R+++ L K+ YR+ DGL+AWE L+ DLIL ++
Sbjct: 866 FFAQSTPRVLIVDDSVTAREMLAISLVKAGYRIEEARDGLEAWEKLRAG-LACDLILCDL 924
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++P ++G LL+ + E E + IPV M++S+ S + +GA Y VKP
Sbjct: 925 EMPRLNGLELLSRLQEDEQLQGIPVAMITSRGSQKMQHLAAAKGAKGYFVKP 976
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 28 QRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDL 87
Q+ VL+V+ + R +++ K+ YRV DG +AWE L+G D++ ++++
Sbjct: 712 QKSGAMVLIVDDSITVRGLLSLSFSKAGYRVEQARDGQEAWEKLRG-GLPCDIVFCDIEM 770
Query: 88 PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
P ++G LL + + +IPV +++S+ + GA+ Y KP +L
Sbjct: 771 PRMNGLELLYNLQKDPRLASIPVALLTSRGAERHRQVAATLGASGYFTKPYTERDL 826
>gi|356497802|ref|XP_003517746.1| PREDICTED: two-component response regulator ARR3-like [Glycine max]
Length = 244
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 78/132 (59%), Gaps = 15/132 (11%)
Query: 34 VLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-------------NI 78
V ++ DDS R+++ LL+ S+ +VTAV G++A + L + +
Sbjct: 20 VHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESDGFVPDLKV 79
Query: 79 DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
DLI+T+ +P ++G+ LL + E + + IPV++MSS++ + + +C+ GA D++VKPV
Sbjct: 80 DLIITDYCMPEMTGYELLKKIKESTMFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPV 139
Query: 139 RRNELRNLWQHV 150
+ ++++ L ++
Sbjct: 140 KLSDVKRLKGYL 151
>gi|410861006|ref|YP_006976240.1| two-component system response regulator [Alteromonas macleodii
AltDE1]
gi|410818268|gb|AFV84885.1| two-component system response regulator [Alteromonas macleodii
AltDE1]
Length = 446
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLV+ D S +++T L Y VTAV DG A L+ + D++L+++ +P + G
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYDVTAVEDGQSALRKLQND--SFDVVLSDLRMPGLDGL 68
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+L +M I K+IPVI+M++ +++ RG +L KPV +ELR L Q +
Sbjct: 69 SLFEEIMG--IRKDIPVILMTAHGTIADAVAATQRGVFGFLPKPVDHDELRTLLQKALSQ 126
Query: 154 QSSMVSGNETQD 165
+ G+ +D
Sbjct: 127 SQAAQPGDWAKD 138
>gi|219363715|ref|NP_001137062.1| uncharacterized protein LOC100217235 [Zea mays]
gi|194698206|gb|ACF83187.1| unknown [Zea mays]
gi|224029529|gb|ACN33840.1| unknown [Zea mays]
gi|414587101|tpg|DAA37672.1| TPA: RR1-Corn type-A response regulator [Zea mays]
Length = 244
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLR----KSSYRVTAVPDGLKAWEVLK----GRPRNIDLILT 83
+RVLLV+ R++ LL S+ V AV KA E L G+ + ID++LT
Sbjct: 12 MRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDGGKEQAIDMVLT 71
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + K IPVI+MSS+D + +C+ GA D++VKP++ ++
Sbjct: 72 DYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISRCLNAGAEDFIVKPLQSKDV 131
Query: 144 RNL 146
+ L
Sbjct: 132 QRL 134
>gi|343505269|ref|ZP_08742847.1| transcriptional regulatory protein CpxR [Vibrio ichthyoenteri ATCC
700023]
gi|342808228|gb|EGU43390.1| transcriptional regulatory protein CpxR [Vibrio ichthyoenteri ATCC
700023]
Length = 252
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
L +LLVE D + +TALL+ Y V+ V G KA +LK R DLIL +V++P+I
Sbjct: 24 LSILLVEDDINLNHQLTALLQSEHYCVSNVECGAKALTLLKMR--QFDLILLDVNIPNID 81
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
GF LL V H PVIM+++ + K + GA DY+ KP E++ + V
Sbjct: 82 GFGLLKYVRSH---SRTPVIMLTAYGAEEHRIKGLRYGADDYISKPCNFEEVKLRIEAVL 138
Query: 152 RRQSSMVSGNET-----QDESVGQQ--KIEATSEN 179
RR + + + Q+ ++ +Q ++ TSEN
Sbjct: 139 RRTQQLAAPTSSRYLSYQELTLDRQTYQVTVTSEN 173
>gi|392376048|ref|YP_003207881.1| response regulator in two-component reguatory system, sigma54
dependent transcriptional regulator [Candidatus
Methylomirabilis oxyfera]
gi|258593741|emb|CBE70082.1| putative response regulator in two-component reguatory system,
sigma54 dependent transcriptional regulator [Candidatus
Methylomirabilis oxyfera]
Length = 460
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+V+ + R+ +T LL K YRV DG +A E++ + + DL++++V +P + G
Sbjct: 4 ILVVDDEQGIREFLTVLLEKQGYRVITASDGERALELIAHQ--SPDLVISDVRMPKMDGI 61
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
LLT + + + ++PVIM+++ S+ + + M GA DY+ KP R +E+R
Sbjct: 62 GLLTGIRKTD--PHLPVIMVTAYASMDSTIQAMRLGAHDYITKPFRIDEIR 110
>gi|83716826|ref|YP_438705.1| chemotaxis sensor histidine kinase [Burkholderia thailandensis
E264]
gi|257141778|ref|ZP_05590040.1| chemotaxis sensor histidine kinase, putative [Burkholderia
thailandensis E264]
gi|83650651|gb|ABC34715.1| chemotaxis sensor histidine kinase, putative [Burkholderia
thailandensis E264]
Length = 832
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G + DL++T++D
Sbjct: 706 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGD--SFDLVVTDID 763
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 764 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 813
>gi|357482307|ref|XP_003611439.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512774|gb|AES94397.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 543
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
W+ F + LRVLL+E D+++ + L Y V+ + +A + P+ + +
Sbjct: 11 WKDFPK--GLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAI 68
Query: 83 TEVDLPSI-SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
EV + GF L E K++P IM S+ ++T+ KC+ GA ++L KP+ +
Sbjct: 69 VEVSISCPDGGFKFL------ENAKDLPTIMTSNSQCINTMMKCIALGAVEFLTKPLSED 122
Query: 142 ELRNLWQHV 150
+L+N+WQHV
Sbjct: 123 KLKNIWQHV 131
>gi|222628933|gb|EEE61065.1| hypothetical protein OsJ_14923 [Oryza sativa Japonica Group]
Length = 231
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Query: 29 RMALRVLLVEADDSTRQIVTALLRKS----SYRVTAVPDGLKAWEVL----KGRPRNIDL 80
R RVLLV+ R++V LL S S+ V AV KA L KG+ + ID+
Sbjct: 5 RGVTRVLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKALGFLGLKEKGKEQAIDM 64
Query: 81 ILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRR 140
+LT+ +P ++G+ LL + K IPVI+MSS++ + +CM GA D++VKP++
Sbjct: 65 VLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGAEDFIVKPLQS 124
Query: 141 NELRNL 146
+++ L
Sbjct: 125 KDVQRL 130
>gi|163846432|ref|YP_001634476.1| response regulator receiver [Chloroflexus aurantiacus J-10-fl]
gi|222524205|ref|YP_002568676.1| response regulator receiver protein [Chloroflexus sp. Y-400-fl]
gi|163667721|gb|ABY34087.1| response regulator receiver [Chloroflexus aurantiacus J-10-fl]
gi|222448084|gb|ACM52350.1| response regulator receiver protein [Chloroflexus sp. Y-400-fl]
Length = 127
Score = 71.6 bits (174), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGR-PRNIDLILTEVDLPSISG 92
+LL+E S +L ++ Y+V PDGL W + + PR +IL ++DLP++ G
Sbjct: 6 ILLIEDSPSQALNFRLMLERAGYQVQVAPDGLTGWRTARTQLPR---MILLDIDLPALDG 62
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
F +L+ + + +NIPV+M++ +D + +V + + GA DYL K EL N+ +
Sbjct: 63 FQVLSRLKRDQQTRNIPVVMLTHRDRIDSVQRALDLGANDYLFKDDVPYELLNVVSQI 120
>gi|168001998|ref|XP_001753701.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695108|gb|EDQ81453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 132
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 13/124 (10%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL----------KGRPRNIDLILT 83
++ DDS R+++ LL+ SSY+VT V L+A E L K ++LI+T
Sbjct: 9 VLAVDDSIIDRKVIERLLKTSSYKVTTVNSALRALEYLGLSESCSTSVKANKVTVNLIMT 68
Query: 84 EVDLPSISGFALLTLV-MEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
+ +P ++G+ LL +V E K +PVI+MSS++ + + +C+ GA ++L+KPV+ +
Sbjct: 69 DYCMPEMTGYDLLKIVKAETSAFKELPVIVMSSENDSNRIKRCLEEGAKEFLIKPVQIED 128
Query: 143 LRNL 146
++ L
Sbjct: 129 VQRL 132
>gi|242075916|ref|XP_002447894.1| hypothetical protein SORBIDRAFT_06g017560 [Sorghum bicolor]
gi|241939077|gb|EES12222.1| hypothetical protein SORBIDRAFT_06g017560 [Sorghum bicolor]
Length = 194
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 9/124 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLR----KSSYRVTAVPDGLKAWEVLK-----GRPRNIDLIL 82
+RVLLV+ R++ LL S+ V AV KA E L G+ + ID++L
Sbjct: 14 MRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDGGGKEQTIDMVL 73
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + K IPVI+MSS+D + +C+ GA DY+VKP++ +
Sbjct: 74 TDYCMPEMTGYDLLRAIKALNPLKPIPVIVMSSEDEPQRISRCLNAGAEDYIVKPLQSKD 133
Query: 143 LRNL 146
++ L
Sbjct: 134 VQRL 137
>gi|302875105|ref|YP_003843738.1| two component transcriptional regulator, winged helix family
[Clostridium cellulovorans 743B]
gi|307690270|ref|ZP_07632716.1| two component transcriptional regulator, winged helix family
protein [Clostridium cellulovorans 743B]
gi|302577962|gb|ADL51974.1| two component transcriptional regulator, winged helix family
[Clostridium cellulovorans 743B]
Length = 224
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+VE + + R+++ A L K Y++ DG+KA ++L +IDLI++++ +P++ G+
Sbjct: 4 VLIVEDNTNIRKLMIARLEKEGYKIFDAEDGIKALQILDSY--HIDLIISDIMMPNMDGY 61
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
L + E + N+P++M+++++S K + GA DY+VKP+ NE+ L R
Sbjct: 62 ELTMSLRESQ--YNMPILMITARESYEDKEKGFLFGADDYMVKPINLNEM-VLRVAALLR 118
Query: 154 QSSMVSGNETQ 164
+S +VS ++ Q
Sbjct: 119 RSKIVSEHKLQ 129
>gi|451946979|ref|YP_007467574.1| serine phosphatase RsbU, regulator of sigma subunit [Desulfocapsa
sulfexigens DSM 10523]
gi|451906327|gb|AGF77921.1| serine phosphatase RsbU, regulator of sigma subunit [Desulfocapsa
sulfexigens DSM 10523]
Length = 405
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+L+V+ + R+++ +++R + Y V G +A E+++ P DLIL ++ +P + G
Sbjct: 14 RILVVDDNPVNRELLASIVRNAGYGVVTAIGGKEALELVRQHP--FDLILLDIVMPEMDG 71
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
FA+ + E +++P+IM+SS D T C GA DY+ KP R E+
Sbjct: 72 FAVCKSLQEDLQTRDVPIIMVSSLDLSETKIHCFDLGAIDYITKPFHRGEV 122
>gi|418397150|ref|ZP_12970886.1| chemotaxis histidine kinase [Burkholderia pseudomallei 354a]
gi|418556731|ref|ZP_13121352.1| chemotaxis histidine kinase [Burkholderia pseudomallei 354e]
gi|385366559|gb|EIF72170.1| chemotaxis histidine kinase [Burkholderia pseudomallei 354e]
gi|385369274|gb|EIF74616.1| chemotaxis histidine kinase [Burkholderia pseudomallei 354a]
Length = 864
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 738 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDA--FDLVVTDID 795
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 796 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 845
>gi|167615214|ref|ZP_02383849.1| chemotaxis sensor histidine kinase, putative [Burkholderia
thailandensis Bt4]
Length = 847
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G + DL++T++D
Sbjct: 721 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGD--SFDLVVTDID 778
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 779 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 828
>gi|254184794|ref|ZP_04891383.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei 1655]
gi|184215386|gb|EDU12367.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei 1655]
Length = 864
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 738 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDA--FDLVVTDID 795
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 796 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 845
>gi|315646887|ref|ZP_07900002.1| two-component response regulator [Paenibacillus vortex V453]
gi|315277817|gb|EFU41141.1| two-component response regulator [Paenibacillus vortex V453]
Length = 218
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
++L+VE D I+ L +Y T V DGL A E ++ DLIL +V +P I G
Sbjct: 4 KILIVEDDIHISNIIKMNLNIVNYATTEVYDGLAALEAIE--RETFDLILLDVMIPKIDG 61
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
F L++ + H IPVI +++++SV + GA DY+VKP EL + V R
Sbjct: 62 FELMSKIQRH----RIPVIFLTAKNSVYDKVTGLKLGADDYMVKPFEAIELLARIETVLR 117
Query: 153 RQSSMVSGNETQDESVGQQKIEAT 176
R S + QD V K E T
Sbjct: 118 RYGKEESMMQFQDVQVNMDKREVT 141
>gi|255544001|ref|XP_002513063.1| Two-component response regulator ARR8, putative [Ricinus communis]
gi|223548074|gb|EEF49566.1| Two-component response regulator ARR8, putative [Ricinus communis]
Length = 197
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 94/188 (50%), Gaps = 34/188 (18%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL-------------------- 71
VL V+ R+++ LL+ SS+ VTAV G KA E L
Sbjct: 9 FHVLAVDDSLIDRKLIERLLKTSSFHVTAVDSGSKALEFLGLNEEEEEEEEEEERRDSSP 68
Query: 72 --------KGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVY 123
+ ++LI+T+ +P ++G+ LL + E + K+IPV++MSS++ S +
Sbjct: 69 ISVCPDDEHHQDLQVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRIN 128
Query: 124 KCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKI---EATSEND 180
+C+ GA ++ +KPV+ +++ L H+ + ++ NE ++ G ++I E T
Sbjct: 129 RCLEEGAEEFFLKPVQLSDVNKLKPHMMKGKT---RENEPNNKRKGMEEIHSPERTRTRY 185
Query: 181 AASNHSSG 188
A+N+++G
Sbjct: 186 YANNNNNG 193
>gi|357482309|ref|XP_003611440.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512775|gb|AES94398.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 548
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
W+ F + LRVLL+E D+++ + L Y V+ + +A + P+ + +
Sbjct: 11 WKDFPK--GLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAI 68
Query: 83 TEVDLPSI-SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
EV + GF L E K++P IM S+ ++T+ KC+ GA ++L KP+ +
Sbjct: 69 VEVSISCPDGGFKFL------ENAKDLPTIMTSNSQCINTMMKCIALGAVEFLTKPLSED 122
Query: 142 ELRNLWQHV 150
+L+N+WQHV
Sbjct: 123 KLKNIWQHV 131
>gi|254301071|ref|ZP_04968515.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei 406e]
gi|386865685|ref|YP_006278633.1| chemotaxis histidine kinase [Burkholderia pseudomallei 1026b]
gi|418536911|ref|ZP_13102577.1| chemotaxis histidine kinase [Burkholderia pseudomallei 1026a]
gi|157811375|gb|EDO88545.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei 406e]
gi|385351283|gb|EIF57762.1| chemotaxis histidine kinase [Burkholderia pseudomallei 1026a]
gi|385662813|gb|AFI70235.1| chemotaxis histidine kinase [Burkholderia pseudomallei 1026b]
Length = 864
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 738 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDA--FDLVVTDID 795
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 796 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 845
>gi|237509461|ref|ZP_04522176.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei MSHR346]
gi|235001666|gb|EEP51090.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei MSHR346]
Length = 864
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 738 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDA--FDLVVTDID 795
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 796 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 845
>gi|406660025|ref|ZP_11068160.1| Mycobacterial persistence regulator A [Cecembia lonarensis LW9]
gi|405556159|gb|EKB51109.1| Mycobacterial persistence regulator A [Cecembia lonarensis LW9]
Length = 349
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 69/116 (59%), Gaps = 2/116 (1%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M +++LL+E + RQ ++ +L ++V +G++ E++ ++IDL+++++ +P
Sbjct: 1 MPIKILLIEDEQDLRQNISEMLEIEGFQVFQAINGIEGLELI--NKQSIDLVISDIMMPL 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
+ G+ LL +V + N+P I +S++ S+ M +GA DYL+KP+ N L N
Sbjct: 59 LDGYQLLEIVRGNPSFSNLPFIFLSAKSSLKDQRLGMEKGAEDYLIKPIAFNSLLN 114
>gi|297824073|ref|XP_002879919.1| hypothetical protein ARALYDRAFT_483202 [Arabidopsis lyrata subsp.
lyrata]
gi|297325758|gb|EFH56178.1| hypothetical protein ARALYDRAFT_483202 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 19/136 (13%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGR------------PR----- 76
++ DDS R+++ LL+KSS +VT V G KA E L R P+
Sbjct: 11 VLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNNPNALSTSPQIHQEV 70
Query: 77 NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
I+LI+T+ +P ++G+ LL V E ++IPV++MSS++ + + +C+ GA ++ +K
Sbjct: 71 EINLIITDYCMPGMTGYDLLKKVKESAALRSIPVVIMSSENVPARISRCLEEGAEEFFLK 130
Query: 137 PVRRNELRNLWQHVWR 152
PV+ +L L H+ +
Sbjct: 131 PVKLADLTKLKPHMMK 146
>gi|351725781|ref|NP_001238384.1| uncharacterized protein LOC100306152 [Glycine max]
gi|255627697|gb|ACU14193.1| unknown [Glycine max]
Length = 201
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 76/130 (58%), Gaps = 9/130 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL--KGRPRNI-------DLIL 82
L VL V+ R+++ LL+ SS +VT V G +A + L G +I +LI+
Sbjct: 21 LHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGLDSVKVNLIM 80
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + + +PV++MSS++ ++ + C+ GA ++L+KPV+ ++
Sbjct: 81 TDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSD 140
Query: 143 LRNLWQHVWR 152
++ + + R
Sbjct: 141 VKRVTDFIMR 150
>gi|53717516|ref|YP_105047.1| chemotaxis sensor histidine kinase [Burkholderia mallei ATCC 23344]
gi|67639240|ref|ZP_00438121.1| chemotaxis histidine kinase/response regulator [Burkholderia mallei
GB8 horse 4]
gi|121596610|ref|YP_990998.1| chemotaxis sensor histidine kinase [Burkholderia mallei SAVP1]
gi|124382465|ref|YP_001025399.1| chemotaxis sensor histidine kinase [Burkholderia mallei NCTC 10229]
gi|126447289|ref|YP_001077463.1| putative chemotaxis sensor histidine kinase [Burkholderia mallei
NCTC 10247]
gi|167002350|ref|ZP_02268140.1| putative chemotaxis histidine kinase CheA [Burkholderia mallei
PRL-20]
gi|254177166|ref|ZP_04883822.1| putative chemotaxis sensor histidine kinase [Burkholderia mallei
ATCC 10399]
gi|254202980|ref|ZP_04909342.1| putative chemotaxis histidine kinase CheA [Burkholderia mallei FMH]
gi|52423486|gb|AAU47056.1| putative chemotaxis sensor histidine kinase [Burkholderia mallei
ATCC 23344]
gi|121224408|gb|ABM47939.1| putative chemotaxis sensor histidine kinase [Burkholderia mallei
SAVP1]
gi|126240143|gb|ABO03255.1| putative chemotaxis sensor histidine kinase [Burkholderia mallei
NCTC 10247]
gi|147746025|gb|EDK53103.1| putative chemotaxis histidine kinase CheA [Burkholderia mallei FMH]
gi|160698206|gb|EDP88176.1| putative chemotaxis sensor histidine kinase [Burkholderia mallei
ATCC 10399]
gi|238519777|gb|EEP83244.1| chemotaxis histidine kinase/response regulator [Burkholderia mallei
GB8 horse 4]
gi|243061999|gb|EES44185.1| putative chemotaxis histidine kinase CheA [Burkholderia mallei
PRL-20]
gi|261826821|gb|ABM98972.2| putative chemotaxis sensor histidine kinase [Burkholderia mallei
NCTC 10229]
Length = 864
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 738 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDA--FDLVVTDID 795
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 796 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 845
>gi|441415444|dbj|BAM74646.1| type-A response regulator [Torenia fournieri]
Length = 141
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 76/127 (59%), Gaps = 12/127 (9%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK-GRPRNI-----------D 79
+ VL V+ + R IV LL+ SS +VT V +G +A E L G +NI +
Sbjct: 8 VHVLAVDDNLIDRTIVEKLLKNSSCKVTTVENGRRALEYLGLGDDQNISSDDNAAASKVN 67
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+I+T+ +P ++G+ LL + E + K++PV++MSS++ + + KC+ GA +++KP++
Sbjct: 68 MIITDYCMPGMTGYELLKKIKESSVMKDVPVVIMSSENVPTRINKCLEEGAEMFMLKPLK 127
Query: 140 RNELRNL 146
++++ L
Sbjct: 128 HSDMKKL 134
>gi|333893877|ref|YP_004467752.1| two-component system response regulator [Alteromonas sp. SN2]
gi|332993895|gb|AEF03950.1| two-component system response regulator [Alteromonas sp. SN2]
Length = 446
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLV+ D S +++T L Y+VTAV DG A L+ D++L+++ +P + G
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYQVTAVEDGNAALRKLQNDA--FDVVLSDLRMPGLDGL 68
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
+L +M I K+IPVI+M++ ++S RG +L KPV +ELR L Q
Sbjct: 69 SLFEEIMG--IRKDIPVILMTAHGTISDAVAATQRGVFGFLPKPVDHDELRTLLQ 121
>gi|126445509|ref|YP_001063675.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei 668]
gi|126225000|gb|ABN88505.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei 668]
Length = 864
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 738 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDA--FDLVVTDID 795
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 796 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 845
>gi|15222035|ref|NP_177627.1| two-component response regulator ARR15 [Arabidopsis thaliana]
gi|51315904|sp|Q7G8V2.1|ARR15_ARATH RecName: Full=Two-component response regulator ARR15
gi|5882734|gb|AAD55287.1|AC008263_18 Similar to gb|AB008490 response regulator 7 (ARR7) from Arabidopsis
thaliana. EST gb|AA042183 comes from this gene
[Arabidopsis thaliana]
gi|11870065|gb|AAG40611.1|AF305720_1 response regulator 15 [Arabidopsis thaliana]
gi|12323888|gb|AAG51914.1|AC013258_8 putative response regulator (two component phosphotransfer
signaling); 70657-71777 [Arabidopsis thaliana]
gi|332197523|gb|AEE35644.1| two-component response regulator ARR15 [Arabidopsis thaliana]
Length = 206
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN---------IDLIL 82
L VL V+ R+++ LL+ S+ +VT V G +A + L N ++LI+
Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLIV 77
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + IPV++MSS++ + +CM+ GA ++L+KPV+ +
Sbjct: 78 TDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLAD 137
Query: 143 LRNLWQHVWR 152
++ L + + R
Sbjct: 138 VKRLKELIMR 147
>gi|134278054|ref|ZP_01764768.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei 305]
gi|134249838|gb|EBA49918.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei 305]
Length = 864
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 738 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDA--FDLVVTDID 795
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 796 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 845
>gi|126457146|ref|YP_001076568.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei 1106a]
gi|242311125|ref|ZP_04810142.1| putative chemotaxis histidine kinase CheA [Burkholderia
pseudomallei 1106b]
gi|403523778|ref|YP_006659347.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei BPC006]
gi|126230914|gb|ABN94327.1| putative chemotaxis histidine kinase CheA [Burkholderia
pseudomallei 1106a]
gi|242134364|gb|EES20767.1| putative chemotaxis histidine kinase CheA [Burkholderia
pseudomallei 1106b]
gi|403078845|gb|AFR20424.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei BPC006]
Length = 864
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 738 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDA--FDLVVTDID 795
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 796 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 845
>gi|76817829|ref|YP_336122.1| chemotaxis histidine kinase [Burkholderia pseudomallei 1710b]
gi|76582302|gb|ABA51776.1| chemotaxis histidine kinase [Burkholderia pseudomallei 1710b]
Length = 1079
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 953 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGD--VFDLVVTDID 1010
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 1011 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 1060
>gi|78355118|ref|YP_386567.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
gi|78217523|gb|ABB36872.1| response regulator receiver protein [Desulfovibrio alaskensis G20]
Length = 139
Score = 71.2 bits (173), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+VE D TR I+ ++ ++V V DG AWE L+ P +IDL++T+V +P + G
Sbjct: 4 ILIVEDDPITRGILRDIVTSYGHKVLDVADGRTAWERLQNDP-DIDLMITDVRMPGLDGM 62
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
L+ ++ ++ + +PVI+ S + + + + RGA+ ++ KP+ EL++ Q+
Sbjct: 63 ELVGMLRSNDRLQGLPVIITSGVVGLRQIARLLRRGASSFIAKPIDPKELQHCIQN 118
>gi|16124842|ref|NP_419406.1| chemotaxis protein CheY [Caulobacter crescentus CB15]
gi|221233562|ref|YP_002515998.1| two-component receiver domain-containing protein [Caulobacter
crescentus NA1000]
gi|13421788|gb|AAK22574.1| chemotaxis protein CheYI [Caulobacter crescentus CB15]
gi|220962734|gb|ACL94090.1| two-component receiver domain protein [Caulobacter crescentus
NA1000]
Length = 125
Score = 71.2 bits (173), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
A+R+LLVE D++ R +VT +L + Y V+ DG A ++L G + ++ ++++P +
Sbjct: 3 AMRILLVEDDEAIRDLVTGVLEGAGYEVSTAADGQAALDMLPGVAPHA--MVVDINMPGM 60
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR-RNELRNLWQH 149
G ALL V IP +M+++Q S + + M GAAD++ KP R LR L +
Sbjct: 61 DGLALLHAVRRDPAFAEIPALMLTAQTSPEDIRRSMSLGAADFIGKPFEARVLLRRLERM 120
Query: 150 V 150
V
Sbjct: 121 V 121
>gi|333908025|ref|YP_004481611.1| response regulator receiver protein [Marinomonas posidonica
IVIA-Po-181]
gi|333478031|gb|AEF54692.1| response regulator receiver protein [Marinomonas posidonica
IVIA-Po-181]
Length = 268
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 39 ADDS--TRQIVTALL--RKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFA 94
ADDS R +V + + + S R+ + +GL A +L+ + +D++++++D+P + GF
Sbjct: 9 ADDSQSVRSVVKSTIYDQLGSQRILSAVNGLTAKFILQKQA--VDVVISDLDMPHLDGFQ 66
Query: 95 LLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
LL+ + H KN P IMM+S+DS S V + +G YLVKP L + + W
Sbjct: 67 LLSFIRNHPKLKNTPFIMMASEDSKSFVMDAIEKGVTQYLVKPFTPERLEDAIRRAW 123
>gi|359807455|ref|NP_001241393.1| uncharacterized protein LOC100778707 [Glycine max]
gi|255637322|gb|ACU18991.1| unknown [Glycine max]
Length = 146
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 76/123 (61%), Gaps = 11/123 (8%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL----------KGRPRNIDLILT 83
VL V+ + R++V LLR SS +VT +G +A E+L GR + +++++T
Sbjct: 19 VLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNTMNGRSK-VNMVIT 77
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + E + K +PV++MSS++ + + KC+ GA +++KP++++++
Sbjct: 78 DYCMPGMTGYELLKKIKESSVTKEVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSDV 137
Query: 144 RNL 146
+ L
Sbjct: 138 KKL 140
>gi|427713660|ref|YP_007062284.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 6312]
gi|427377789|gb|AFY61741.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 6312]
Length = 600
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 16/151 (10%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+V+ ++ R + + L++ Y V DG +A E L R DLIL + +P ++GF
Sbjct: 193 ILVVDDVENNRVLFSRQLQRQGYEVDTAVDGYQALEKLSHRAY--DLILLDYMMPELNGF 250
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR-------------R 140
+L+ + + ++IPVIM+S+ D + V +C+ GA DYL KP+ +
Sbjct: 251 QVLSRLKSDQKLRHIPVIMISANDEIDQVIRCIEIGAEDYLPKPLNSTLLRARITSTLDK 310
Query: 141 NELRNLWQHVWRRQSSMVSGNETQDESVGQQ 171
+LR+ Q + RQ +S T++ +G+Q
Sbjct: 311 KQLRDREQD-YLRQVESLSAKMTKELEMGRQ 340
>gi|254473219|ref|ZP_05086617.1| response regulatory protein [Pseudovibrio sp. JE062]
gi|374333100|ref|YP_005083284.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Pseudovibrio sp. FO-BEG1]
gi|211957940|gb|EEA93142.1| response regulatory protein [Pseudovibrio sp. JE062]
gi|359345888|gb|AEV39262.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Pseudovibrio sp. FO-BEG1]
Length = 518
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 70/117 (59%), Gaps = 5/117 (4%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN-IDLILTEVDLP 88
MA R+L+V+ D R+++ +++ YR + DG +A E+L G ++ IDL++ ++ +P
Sbjct: 1 MAQRILIVDDDPVQRRLLEEAVKRFGYRSKSCVDGREALEILTGSAQSEIDLVILDLMMP 60
Query: 89 SISGFALLTLVMEHEICKN-IPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+ GF +L E KN +PVI+ ++ S+ TV + M GA D++VKP R L+
Sbjct: 61 EVDGFQVLKETRE---AKNAVPVIVQTANGSIETVIEAMRAGAQDFVVKPSRPERLQ 114
>gi|444918784|ref|ZP_21238843.1| hypothetical protein D187_01664 [Cystobacter fuscus DSM 2262]
gi|444709467|gb|ELW50482.1| hypothetical protein D187_01664 [Cystobacter fuscus DSM 2262]
Length = 960
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VLL E + R + LL ++ Y V AV DG A E + RP +L+L++V +P + GF
Sbjct: 612 VLLAEDNADMRAHLRRLLEEAGYTVEAVADGQAALERARARPP--ELVLSDVMMPGLDGF 669
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
LL + +H + PVI++S++ + + + GA+DYLVKP EL
Sbjct: 670 ELLRALKDHAPTSHTPVILLSARAGQEAIVEGLAAGASDYLVKPFSAREL 719
>gi|162451922|ref|YP_001614289.1| hypothetical protein sce3649 [Sorangium cellulosum So ce56]
gi|161162504|emb|CAN93809.1| unnamed protein product [Sorangium cellulosum So ce56]
Length = 1029
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLV+AD + +++ L+K+ Y VT DG A L+ DL+L++ LP++ G+
Sbjct: 6 LLLVDADPRSVRVLEVSLKKAGYSVTTAKDGADALAKLEVS--TPDLVLSDTRLPNVDGY 63
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
AL+ + EH +IPV+ ++SQ S+ + + G DYL KP+ EL
Sbjct: 64 ALVRKMKEHADWASIPVVFLTSQRSIEDKIRGLELGVEDYLTKPIFVREL 113
>gi|217422546|ref|ZP_03454049.1| putative chemotaxis histidine kinase CheA [Burkholderia
pseudomallei 576]
gi|217394777|gb|EEC34796.1| putative chemotaxis histidine kinase CheA [Burkholderia
pseudomallei 576]
Length = 864
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 738 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGD--VFDLVVTDID 795
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 796 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 845
>gi|150017333|ref|YP_001309587.1| two component transcriptional regulator [Clostridium beijerinckii
NCIMB 8052]
gi|149903798|gb|ABR34631.1| two component transcriptional regulator, winged helix family
[Clostridium beijerinckii NCIMB 8052]
Length = 225
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 91/167 (54%), Gaps = 12/167 (7%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+VE D R++ + +L K+ Y+ T DG++A VL IDLI++++ +P++ GF
Sbjct: 4 ILIVEDDKELRELFSTVLLKNGYKTTGAKDGIEALNVLD--KEYIDLIISDIMMPNMDGF 61
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
L+ + + + N+P++M+++++ + + G DY+VKP+ NE+ L R
Sbjct: 62 ELIKSIRDAQF--NLPILMITAKERFQDKQRGFLLGIDDYMVKPIDVNEMV-LRVGALLR 118
Query: 154 QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFI 200
++ ++S + +SVG + E D+ S + +G + K +I
Sbjct: 119 RAQIIS---ERKQSVG----DTMLEYDSLSVYQNGEATVLPQKEFYI 158
>gi|15227325|ref|NP_181663.1| two-component response regulator ARR8 [Arabidopsis thaliana]
gi|51315814|sp|O80365.1|ARR8_ARATH RecName: Full=Two-component response regulator ARR8; AltName:
Full=Response reactor 3
gi|3273200|dbj|BAA31145.1| responce reactor3 [Arabidopsis thaliana]
gi|3894192|gb|AAC78541.1| putative two-component response regulator 3 protein [Arabidopsis
thaliana]
gi|18491269|gb|AAL69459.1| At2g41310/F13H10.14 [Arabidopsis thaliana]
gi|110736644|dbj|BAF00286.1| putative two-component response regulator 3 protein [Arabidopsis
thaliana]
gi|330254865|gb|AEC09959.1| two-component response regulator ARR8 [Arabidopsis thaliana]
Length = 225
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 19/136 (13%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGR------------PR----- 76
++ DDS R+++ LL+KSS +VT V G KA E L R P+
Sbjct: 11 VLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQEV 70
Query: 77 NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
I+LI+T+ +P ++G+ LL V E ++IPV++MSS++ + + +C+ GA ++ +K
Sbjct: 71 EINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLK 130
Query: 137 PVRRNELRNLWQHVWR 152
PV+ +L L H+ +
Sbjct: 131 PVKLADLTKLKPHMMK 146
>gi|300914725|ref|ZP_07132041.1| response regulator receiver modulated diguanylate cyclase
[Thermoanaerobacter sp. X561]
gi|307724041|ref|YP_003903792.1| response regulator receiver modulated diguanylate cyclase
[Thermoanaerobacter sp. X513]
gi|300889660|gb|EFK84806.1| response regulator receiver modulated diguanylate cyclase
[Thermoanaerobacter sp. X561]
gi|307581102|gb|ADN54501.1| response regulator receiver modulated diguanylate cyclase
[Thermoanaerobacter sp. X513]
Length = 310
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGR-PRNIDLILTEVDLPSISG 92
+L+V+ + TR+I+ +L + Y V DG +A ++ K + P D+++ ++ +P ++G
Sbjct: 6 ILIVDDNKLTRKILKDILENAGYGVLEAKDGEEALQIYKNKLP---DMVILDIVMPGMTG 62
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL----RNLWQ 148
F LL ++ + E +P+I+++SQD+ K + GA DYLVKP EL NL+Q
Sbjct: 63 FDLLRILRKEEENLMLPIILLTSQDNFEEKIKGLELGADDYLVKPFNDKELLFKVNNLFQ 122
Query: 149 HV 150
+
Sbjct: 123 RI 124
>gi|242073184|ref|XP_002446528.1| hypothetical protein SORBIDRAFT_06g017550 [Sorghum bicolor]
gi|241937711|gb|EES10856.1| hypothetical protein SORBIDRAFT_06g017550 [Sorghum bicolor]
Length = 249
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 9/124 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLR----KSSYRVTAVPDGLKAWEVLK-----GRPRNIDLIL 82
+RVLLV+ R++ LL S+ V AV KA E L G+ + ID++L
Sbjct: 14 MRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDGGGKEQAIDMVL 73
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + K IPVI+MSS+D + +C+ GA D++VKP++ +
Sbjct: 74 TDYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISRCLSAGAEDFIVKPLQSKD 133
Query: 143 LRNL 146
++ L
Sbjct: 134 VQRL 137
>gi|254193936|ref|ZP_04900368.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei S13]
gi|169650687|gb|EDS83380.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei S13]
Length = 864
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 738 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGD--VFDLVVTDID 795
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 796 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 845
>gi|167040684|ref|YP_001663669.1| response regulator receiver modulated diguanylate cyclase
[Thermoanaerobacter sp. X514]
gi|166854924|gb|ABY93333.1| response regulator receiver modulated diguanylate cyclase
[Thermoanaerobacter sp. X514]
Length = 318
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGR-PRNIDLILTEVDLPSISG 92
+L+V+ + TR+I+ +L + Y V DG +A ++ K + P D+++ ++ +P ++G
Sbjct: 14 ILIVDDNKLTRKILKDILENAGYGVLEAKDGEEALQIYKNKLP---DMVILDIVMPGMTG 70
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL----RNLWQ 148
F LL ++ + E +P+I+++SQD+ K + GA DYLVKP EL NL+Q
Sbjct: 71 FDLLRILRKEEENLMLPIILLTSQDNFEEKIKGLELGADDYLVKPFNDKELLFKVNNLFQ 130
Query: 149 HV 150
+
Sbjct: 131 RI 132
>gi|406895332|gb|EKD39927.1| hypothetical protein ACD_75C00243G0001 [uncultured bacterium]
Length = 713
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 29 RMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLP 88
+ ++R+LL E + +++ +L K+ Y+VT VP+G A E G P D IL ++ +P
Sbjct: 588 KQSIRILLAEDNPVNQKLAMMMLSKAGYQVTVVPNGKAAVETFTGTPDGFDTILMDIQMP 647
Query: 89 SISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN---ELRN 145
+ G+ T + + + IP+I M++ C G DY++KP++R ++
Sbjct: 648 EMDGYE-ATRQIRRQGFREIPIIAMTANAMKGDKELCFAAGMNDYIMKPIKREIVFQILE 706
Query: 146 LWQHV 150
W H+
Sbjct: 707 KWLHI 711
>gi|379057816|ref|ZP_09848342.1| response regulator with CheY-like receiver domain-containing
protein and winged-helix DNA-binding domain-containing
protein [Serinicoccus profundi MCCC 1A05965]
Length = 224
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+ E ++ +++ LR +R T V DG+ A E G IDL++ +V LP + GF
Sbjct: 4 ILIAEDEEGIARVIDRGLRADGHRTTIVSDGIAALEAASGG--QIDLVVLDVGLPKMDGF 61
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+L M + + +PVIM +++DSV + GA DYL KP R ELR + R+
Sbjct: 62 TVLR--MLRTMDEPVPVIMCTARDSVEDTVHGLENGAEDYLPKPFRVEELRARVKLRLRQ 119
Query: 154 QSSMVSGNETQD 165
+ +G +D
Sbjct: 120 HAEAQAGGRGED 131
>gi|410464253|ref|ZP_11317706.1| response regulator (CheY-like domain and winged-helix DNA-binding
domain containing protein) [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409982639|gb|EKO39075.1| response regulator (CheY-like domain and winged-helix DNA-binding
domain containing protein) [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 122
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M +L+V+ + R +V ++RK ++VTA DGL E L + +DLI+T++++P
Sbjct: 1 MPKHILIVDDSKTVRNLVAFIMRKEGFKVTAAEDGLDGLEKLY-TDQQVDLIITDINMPR 59
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+ G + V E ++ ++IP++++S++ ++ + GA Y+VKP +
Sbjct: 60 MDGITFIKTVREQDLYRDIPIVVLSTEGEERDIHVGLSIGANLYMVKPAQ 109
>gi|326796172|ref|YP_004313992.1| response regulator receiver protein [Marinomonas mediterranea
MMB-1]
gi|326546936|gb|ADZ92156.1| response regulator receiver protein [Marinomonas mediterranea
MMB-1]
Length = 278
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 35 LLVEADDSTRQIVTALL--RKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
L+V+ + S R IV + + + S RV + +GL A +L+ + +D+++++VD+P + G
Sbjct: 16 LVVDDNQSFRSIVKSTINDQLGSLRVISAVNGLIAKLILQ--KQTVDIVISDVDMPRLDG 73
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
F LL+ + H K+IP IMM+ +DS V + +G +YLVKP +L + + W
Sbjct: 74 FELLSFMRSHPKLKHIPFIMMTPEDSKEFVCNAIEQGVTEYLVKPFTIEKLEDAIRRSW 132
>gi|298529775|ref|ZP_07017178.1| response regulator receiver protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511211|gb|EFI35114.1| response regulator receiver protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 122
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
MA +L+V+ + R ++ +++K + VT DGL A E L N+DLI+T++++P
Sbjct: 1 MAKHILMVDDSKTVRNLIAFIVKKEGFHVTTAEDGLDALEKLYA-ASNVDLIITDINMPR 59
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+ GF + + E E +++PVI++S++ + + GA Y+VKP +
Sbjct: 60 MDGFTFVQNLREQEAFRDVPVIILSTEGQEKDKEQGLSLGANLYMVKPAQ 109
>gi|109631200|gb|ABG35776.1| SRR380 [Striga asiatica]
Length = 432
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
+P + GF LL V + ++PVIM+S+ V K + GA DYLVKPVR ELRN+
Sbjct: 1 MPDMDGFKLLEQV---GLEMDLPVIMLSANSDPKLVMKGVTHGACDYLVKPVRIEELRNI 57
Query: 147 WQHVWRRQSSMVSGNETQ 164
WQHV RR+ VS NE +
Sbjct: 58 WQHVIRRK-KFVSKNENK 74
>gi|297817018|ref|XP_002876392.1| hypothetical protein ARALYDRAFT_486148 [Arabidopsis lyrata subsp.
lyrata]
gi|297322230|gb|EFH52651.1| hypothetical protein ARALYDRAFT_486148 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 23/139 (16%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID-------------- 79
++ DDS R+ + LL+KSS +VT V G KA E L G + ID
Sbjct: 9 VLAVDDSLFDRKYIERLLQKSSCQVTTVDSGSKALEFL-GLRQGIDSNDPNALSKSPVTH 67
Query: 80 ------LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADY 133
LI+T+ +P ++G+ LL V E ++IPV++MSS++ + + +C+ GA ++
Sbjct: 68 QVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEF 127
Query: 134 LVKPVRRNELRNLWQHVWR 152
+KPVR +L L H+ +
Sbjct: 128 FLKPVRLADLNKLKPHMMK 146
>gi|317153581|ref|YP_004121629.1| response regulator receiver [Desulfovibrio aespoeensis Aspo-2]
gi|316943832|gb|ADU62883.1| response regulator receiver [Desulfovibrio aespoeensis Aspo-2]
Length = 122
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
MA +L+V+ + R +V +++K ++VT DGL E L + +DLI+++V++P
Sbjct: 1 MAKHILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKLYS-AKEVDLIVSDVNMPR 59
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL-RNL 146
+ G + V E E ++IP++++S++ + + GA Y+VKP + +L RN+
Sbjct: 60 MDGLTFIKTVREQEAYRDIPIVVLSTEGQDKDIQTGLTVGANLYMVKPAQPEKLVRNV 117
>gi|167907663|ref|ZP_02494868.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei NCTC 13177]
Length = 686
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 560 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDA--FDLVVTDID 617
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 618 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 667
>gi|167850727|ref|ZP_02476235.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei B7210]
Length = 674
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 548 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDA--FDLVVTDID 605
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 606 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 655
>gi|53722891|ref|YP_111876.1| chemotaxis-related histidine kinase [Burkholderia pseudomallei
K96243]
gi|52213305|emb|CAH39348.1| putative chemotaxis-related histidine kinase protein [Burkholderia
pseudomallei K96243]
Length = 864
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 738 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGD--VFDLVVTDID 795
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 796 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 845
>gi|319789306|ref|YP_004150939.1| two component transcriptional regulator, winged helix family
[Thermovibrio ammonificans HB-1]
gi|317113808|gb|ADU96298.1| two component transcriptional regulator, winged helix family
[Thermovibrio ammonificans HB-1]
Length = 223
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
RVLLVE DDS ++VT L+ Y V V DGL+A E+LK R D+I+ ++ LP ++G
Sbjct: 3 RVLLVEDDDSIGELVTYYLKNKGYDVEWVQDGLEARELLK--SRKYDIIVLDLMLPGVNG 60
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
L V I K+ P+I++++ T + GA DY+ KP EL + V R
Sbjct: 61 LDLCREVRLRGINKDTPIIVLTAIGDEDTKVHGLEAGADDYVTKPFSIKELLARIEAVLR 120
Query: 153 R 153
R
Sbjct: 121 R 121
>gi|224138036|ref|XP_002326502.1| pseudo response regulator [Populus trichocarpa]
gi|222833824|gb|EEE72301.1| pseudo response regulator [Populus trichocarpa]
Length = 448
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
++ W+ F + LRVLL++ D + + + L Y V + +A + P +
Sbjct: 8 LSAWKDFPK--GLRVLLLDEDSMSAAEIKSKLEAMDYIVYTFCNETEALSAISNEPGSFH 65
Query: 80 LILTEVDLPSIS-GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
+ + EV + + S F L E K++P IM SS D ++T+ KC+ GA ++L KP+
Sbjct: 66 VAIVEVSMSNSSRSFKFL------ETSKDLPTIMTSSIDCLNTMMKCIALGAVEFLRKPL 119
Query: 139 RRNELRNLWQHV 150
++LRN+WQHV
Sbjct: 120 SEDKLRNIWQHV 131
>gi|46580478|ref|YP_011286.1| chemotaxis protein CheY [Desulfovibrio vulgaris str. Hildenborough]
gi|120602202|ref|YP_966602.1| response regulator receiver protein [Desulfovibrio vulgaris DP4]
gi|387153775|ref|YP_005702711.1| response regulator receiver protein [Desulfovibrio vulgaris RCH1]
gi|46449897|gb|AAS96546.1| chemotaxis protein CheY [Desulfovibrio vulgaris str. Hildenborough]
gi|120562431|gb|ABM28175.1| response regulator receiver protein [Desulfovibrio vulgaris DP4]
gi|311234219|gb|ADP87073.1| response regulator receiver protein [Desulfovibrio vulgaris RCH1]
Length = 122
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M+ +L+V+ + R +V +++K ++VT DGL E L +DLI+++V++P
Sbjct: 1 MSKHILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKLYSS-EGVDLIISDVNMPR 59
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ GF + V E + +N+P++++S++ + M GA Y+VKP + ++
Sbjct: 60 MDGFTFIKTVREQDTYRNLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQPEKM 113
>gi|312283391|dbj|BAJ34561.1| unnamed protein product [Thellungiella halophila]
Length = 190
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 83/153 (54%), Gaps = 15/153 (9%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKG---------RPRNIDLIL 82
L VL V+ R+ + LLR SS +VT V +A + L ++LI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVDEKTVGLEDLKVNLIM 84
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E K+IPV++MSS++ + + +C+ GA D+L+KPV+ ++
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFKDIPVVVMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
Query: 143 LRNLWQHVWRRQSSMVSGNETQDESVGQQKIEA 175
+R L R S + N + +S+ ++++E
Sbjct: 145 VRRL------RDSLIKVENLSSTKSIKKRELET 171
>gi|83310215|ref|YP_420479.1| Serine phosphatase RsbU regulator sigma subunit [Magnetospirillum
magneticum AMB-1]
gi|82945056|dbj|BAE49920.1| Serine phosphatase RsbU regulator sigma subunit [Magnetospirillum
magneticum AMB-1]
Length = 537
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
RVL+ + + R ++ L + ++V AV DGL A E + G+ DL+L ++ +P ++G
Sbjct: 160 RVLVADDSKANRDVLVRYLSREGHQVVAVADGLAAVEAVFGQ--AFDLVLLDMIMPGMNG 217
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+L + +++PVIM+S+ D + ++ +C+ GA DYL KP R LR
Sbjct: 218 DEVLKAIKADSRLRSLPVIMISALDGLDSIVRCIEAGAEDYLPKPFNRVLLR 269
>gi|226195867|ref|ZP_03791454.1| putative chemotaxis histidine kinase CheA [Burkholderia
pseudomallei Pakistan 9]
gi|254262517|ref|ZP_04953382.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei 1710a]
gi|418544220|ref|ZP_13109529.1| chemotaxis histidine kinase [Burkholderia pseudomallei 1258a]
gi|418551061|ref|ZP_13116005.1| chemotaxis histidine kinase [Burkholderia pseudomallei 1258b]
gi|225932352|gb|EEH28352.1| putative chemotaxis histidine kinase CheA [Burkholderia
pseudomallei Pakistan 9]
gi|254213519|gb|EET02904.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei 1710a]
gi|385349857|gb|EIF56415.1| chemotaxis histidine kinase [Burkholderia pseudomallei 1258b]
gi|385350409|gb|EIF56947.1| chemotaxis histidine kinase [Burkholderia pseudomallei 1258a]
Length = 864
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 738 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDV--FDLVVTDID 795
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 796 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 845
>gi|218885879|ref|YP_002435200.1| response regulator receiver protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756833|gb|ACL07732.1| response regulator receiver protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 122
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M+ +L+V+ + R +V +++K ++VT DGL E L + +DLI+++V++P
Sbjct: 1 MSKHILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKLYSSEK-VDLIISDVNMPR 59
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ GF + V E E +++P++++S++ + M GA Y+VKP + ++
Sbjct: 60 MDGFTFIKTVREQEAYRDLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQPEKM 113
>gi|167899328|ref|ZP_02486729.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei 7894]
Length = 666
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 540 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDA--FDLVVTDID 597
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 598 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 647
>gi|448299646|ref|ZP_21489655.1| response regulator receiver protein [Natronorubrum tibetense GA33]
gi|445587621|gb|ELY41879.1| response regulator receiver protein [Natronorubrum tibetense GA33]
Length = 189
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK-GRPRNIDLILTEVDLPSISG 92
VLL+E DDS R+++ L S Y TA+ DG + W L G P DL+L +V +P + G
Sbjct: 72 VLLLEDDDSLRKLLENKLESSGYETTALADGRECWSFLATGEP--PDLVLLDVMVPGLDG 129
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
F +L + + + +P+I++SS+ + V + GA DY+ KP
Sbjct: 130 FRVLGRIRNDDRLEGVPIIVLSSRGQQADVRRGFDLGAEDYVTKP 174
>gi|297796971|ref|XP_002866370.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312205|gb|EFH42629.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 153
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%)
Query: 38 EADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLT 97
E++DSTR IVTALL+ SY VTAVPD L+AW +L+ IDL+LTE +P SG LL+
Sbjct: 35 ESEDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEFVMPVHSGTGLLS 94
Query: 98 LVM 100
+M
Sbjct: 95 KIM 97
>gi|449513573|ref|XP_004164360.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR2-like [Cucumis sativus]
Length = 559
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
W+ F + LRVLL++ D S+ + L + Y V + A + +P + +
Sbjct: 11 WKDFPK--GLRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAI 68
Query: 83 TEVDLPSISG-FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
EV + G F L E K++P IM+S+ +ST+ KC+ GA ++L KP+ +
Sbjct: 69 VEVTTSNHEGNFKFL------EAAKDLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDD 122
Query: 142 ELRNLWQHV 150
+LRN+WQHV
Sbjct: 123 KLRNIWQHV 131
>gi|18410485|ref|NP_567037.1| two-component response regulator ARR17 [Arabidopsis thaliana]
gi|51316089|sp|Q9FPR6.1|ARR17_ARATH RecName: Full=Two-component response regulator ARR17
gi|11870071|gb|AAG40613.1|AF305722_1 response regulator 17 [Arabidopsis thaliana]
gi|332645994|gb|AEE79515.1| two-component response regulator ARR17 [Arabidopsis thaliana]
Length = 153
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 10/134 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK-GRPRNID---------LI 81
L VL V+ + R++V +L+ SS +VT +GL+A E L G P+ D LI
Sbjct: 20 LHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVNLI 79
Query: 82 LTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
+T+ +P ++GF LL V E K +PV+++SS++ + + KC+ GA ++ KP++ +
Sbjct: 80 ITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLS 139
Query: 142 ELRNLWQHVWRRQS 155
++ L H+ +S
Sbjct: 140 DVEKLKCHLLNCRS 153
>gi|373854676|ref|ZP_09597474.1| response regulator receiver modulated serine phosphatase
[Opitutaceae bacterium TAV5]
gi|372472543|gb|EHP32555.1| response regulator receiver modulated serine phosphatase
[Opitutaceae bacterium TAV5]
Length = 502
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+L+V+ ++ R +++ L + + V DG A E L+ P DL+L ++ +P + G
Sbjct: 118 RILVVDDNEGNRDMLSRQLERQGHAVATAADGQAALERLRAGP--FDLVLLDMMMPVLDG 175
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+ L + +++PVIM+S+ D +++V +C+ RGA D+L KP LR
Sbjct: 176 YGALDAIKTDPALRHLPVIMISALDELASVVRCIERGAEDFLPKPFNPTLLR 227
>gi|449464910|ref|XP_004150172.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
Length = 560
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 23 WETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLIL 82
W+ F + LRVLL++ D S+ + L + Y V + A + +P + +
Sbjct: 11 WKDFPK--GLRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAI 68
Query: 83 TEVDLPSISG-FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
EV + G F L E K++P IM+S+ +ST+ KC+ GA ++L KP+ +
Sbjct: 69 VEVTTSNHEGNFKFL------EAAKDLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDD 122
Query: 142 ELRNLWQHV 150
+LRN+WQHV
Sbjct: 123 KLRNIWQHV 131
>gi|448656135|ref|ZP_21682387.1| response regulator receiver protein [Haloarcula californiae ATCC
33799]
gi|445763765|gb|EMA14940.1| response regulator receiver protein [Haloarcula californiae ATCC
33799]
Length = 122
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI-DLILTEVDLPSISG 92
+L+ + D R+++ L +S Y VT V DG + W LK P N+ DLI+ ++ +P +SG
Sbjct: 4 ILIADDDKEMRELLRFKL-QSGYEVTTVNDGKECWNYLKANPDNLPDLIILDIMMPGLSG 62
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +L + + E I +IM++S+ + + + GA DY+ KP NEL
Sbjct: 63 YRVLDRMQDSERFDQIQIIMLTSRGKEDDIVRALESGATDYMSKPFSANEL 113
>gi|434399888|ref|YP_007133892.1| CheA signal transduction histidine kinase [Stanieria cyanosphaera
PCC 7437]
gi|428270985|gb|AFZ36926.1| CheA signal transduction histidine kinase [Stanieria cyanosphaera
PCC 7437]
Length = 977
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+ E +TR+++ +L Y+V DG +A +VL IDL+L+++++P ++GF
Sbjct: 857 ILIAEDSVATRRMLEKILSAVGYQVIVCRDGQEALDVLDQHQTRIDLVLSDIEMPRVNGF 916
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
LL + H + + IPV+M +S+ + M GA YL KP++ EL
Sbjct: 917 ELLQKIRSHPVWEEIPVVMATSRTGDRHRQQAMDLGATGYLGKPIQPQEL 966
>gi|392940284|ref|ZP_10305928.1| diguanylate cyclase (GGDEF) domain-containing protein
[Thermoanaerobacter siderophilus SR4]
gi|392292034|gb|EIW00478.1| diguanylate cyclase (GGDEF) domain-containing protein
[Thermoanaerobacter siderophilus SR4]
Length = 209
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGR-PRNIDLILTEVDLPSISG 92
+L+V+ + TR+I+ +L + Y V DG +A ++ K + P D+++ ++ +P ++G
Sbjct: 6 ILIVDDNKLTRKILKDILENAGYGVLEAKDGEEALQIYKNKLP---DMVILDIVMPGMTG 62
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL----RNLWQ 148
F LL ++ + E +P+I+++SQD+ K + GA DYLVKP EL NL+Q
Sbjct: 63 FDLLRILRKEEENLMLPIILLTSQDNFEEKIKGLELGADDYLVKPFNDKELLFKVNNLFQ 122
Query: 149 HV 150
+
Sbjct: 123 RI 124
>gi|397687532|ref|YP_006524851.1| two-component response regulator GltR [Pseudomonas stutzeri DSM
10701]
gi|395809088|gb|AFN78493.1| two-component response regulator GltR [Pseudomonas stutzeri DSM
10701]
Length = 244
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLV+ D R+++ L +S +RV VPDG E L G P DL++ +V LP GF
Sbjct: 8 ILLVDDDQDIRELLQTYLSRSGFRVRTVPDGTNFREALTGDP--ADLVILDVMLPDEDGF 65
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+L + V H+ +P+IM+++ + + GA DYL KP EL + + RR
Sbjct: 66 SLCSWVRGHQKLAQMPIIMLTASSDETDRIIGLELGADDYLAKPFSPRELLARIKALLRR 125
>gi|343512279|ref|ZP_08749414.1| transcriptional regulatory protein CpxR [Vibrio scophthalmi LMG
19158]
gi|342795682|gb|EGU31393.1| transcriptional regulatory protein CpxR [Vibrio scophthalmi LMG
19158]
Length = 252
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLVE D + +TALL+ +SY VT + G +A +LK R DLIL +V++P+I GF
Sbjct: 26 ILLVEDDLNLNHQLTALLQANSYTVTNLECGAQALTLLK--MRQFDLILLDVNVPNIDGF 83
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
LL V H PVIM+++ + K + GA DY+ KP E++ + V RR
Sbjct: 84 GLLKYVRSHS---RTPVIMLTAYGAEEHRIKGLRNGADDYISKPCNFEEVKLRIEAVLRR 140
Query: 154 QSSMVS 159
+ +
Sbjct: 141 TQQLAA 146
>gi|134299991|ref|YP_001113487.1| multi-sensor hybrid histidine kinase [Desulfotomaculum reducens MI-1]
gi|134052691|gb|ABO50662.1| PAS/PAC sensor hybrid histidine kinase [Desulfotomaculum reducens
MI-1]
Length = 1271
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 78/136 (57%), Gaps = 6/136 (4%)
Query: 9 EELKE-MNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKA 67
EEL E + G G +K + ++R +++LLVE + +++VT +L Y + V +G++A
Sbjct: 1024 EELSEILKGVTGCSKTQGGIER--IKILLVEDNHFNQRLVTHML-SDDYSIVEVENGVQA 1080
Query: 68 WEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMM 127
E+L+ + DL+L ++ +P + G+ L+ + KN+P+I +++ KCM
Sbjct: 1081 LEILE--EQKFDLVLMDMQMPVMDGYETTRLIRKQNKYKNLPIIALTAYAMKGDSEKCMA 1138
Query: 128 RGAADYLVKPVRRNEL 143
G YL KPV+R++L
Sbjct: 1139 AGCNGYLAKPVKRDQL 1154
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK-GRPRNIDLILTEVDLPSISG 92
VL+VE D +T+Q+++ L K Y V G +A + K RP D+++ ++ LP ++G
Sbjct: 791 VLVVEDDWTTKQLISNYLEKVGYSVITTQQGKQAITLAKIYRP---DVMILDILLPDLTG 847
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
+ +L + +E K+IP+++ S + GA D++ KP+ L +
Sbjct: 848 WEILKRIKTYEETKDIPIVVCSVMPEKEQAFSL---GAVDFIEKPISEKVLIS------- 897
Query: 153 RQSSMVSGNE--------TQDESVGQQKIEATSENDAASNHS 186
R ++SG + DE Q ++ EN+ H+
Sbjct: 898 RLGKLISGKKKDDTHIVLIDDEEATLQFLKKIIENEGYRTHT 939
>gi|317130175|ref|YP_004096457.1| winged helix family two component transcriptional regulator
[Bacillus cellulosilyticus DSM 2522]
gi|315475123|gb|ADU31726.1| two component transcriptional regulator, winged helix family
[Bacillus cellulosilyticus DSM 2522]
Length = 230
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M ++LLV+ + R+++ S +++ +G +A+ LK + N DLI+ ++ +P
Sbjct: 1 MEAKILLVDDEQEMRKLLKVCFSASPFQLDEASNGDEAF--LKVQENNYDLIILDIMMPE 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
I GF LL + + E+ IPVI++++ V + + RGA DY+VKP EL +
Sbjct: 59 IDGFELLNM-LRVELDTEIPVILLTALGDTERVVEGLKRGADDYVVKPFEPKELVARVES 117
Query: 150 VWRRQSSMVSGNET 163
V RR S+ + NE+
Sbjct: 118 VLRRSKSISTKNES 131
>gi|418067249|ref|ZP_12704597.1| putative two component, sigma54 specific, transcriptional
regulator, Fis family [Geobacter metallireducens RCH3]
gi|373559127|gb|EHP85436.1| putative two component, sigma54 specific, transcriptional
regulator, Fis family [Geobacter metallireducens RCH3]
Length = 410
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 10/144 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+V+ + + R+I+ +L YRV A P G +A E L+ D+ILT++ + +SG
Sbjct: 5 ILIVDDERAQREIIQTILEGEGYRVAAAPGGREALEQLE--TSEFDVILTDLKMQGMSGM 62
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
LL V+E + + IMM++ +V + + M +GA DYL KP+ R+ L + + R
Sbjct: 63 ELLERVLEADPLQC--AIMMTAHGTVDSAVEAMKKGAFDYLEKPLERDNLLLTLRRAFER 120
Query: 154 QSSMVSGNETQDESVGQQKIEATS 177
N ++ V Q++++ TS
Sbjct: 121 V------NLLRENRVLQKRLKETS 138
>gi|167573715|ref|ZP_02366589.1| chemotaxis sensor histidine kinase, putative [Burkholderia
oklahomensis C6786]
Length = 941
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 24 ETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
+T +QR RVL+V+ + R++ LL K Y VT DG+ W ++G + DL++T
Sbjct: 813 DTLVQRKK-RVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGD--SFDLVVT 869
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
++D+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 870 DIDMPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 922
>gi|370988685|dbj|BAL43556.1| type-A response regulator [Petunia x hybrida]
Length = 258
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 97/179 (54%), Gaps = 18/179 (10%)
Query: 14 MNGNEGIAKWETFLQRMAL-RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEV 70
+G G KW +F + + V ++ DDS R ++ LL+ +S +VT V G++A +
Sbjct: 4 FHGGVGRRKWRSFGEFSPVDEVHVLAVDDSLVDRIVIERLLKITSCKVTTVDSGMRALQF 63
Query: 71 L---------KGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVST 121
L + +DLI+T+ +P ++G+ LL + + IPV++MSS++ ++
Sbjct: 64 LGLDEEESSVRIDGLKVDLIITDYCMPGMTGYDLLKKIKGSSF-REIPVVIMSSENVLTR 122
Query: 122 VYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSEND 180
+ +C+ GA D+L+KPV+ +++ L ++ + +T+++ + ++K+ T +D
Sbjct: 123 IDRCLEEGAEDFLLKPVKLADVKRLKSFMFSEDRA-----KTEEKGMNKRKLPETLSDD 176
>gi|224135721|ref|XP_002322144.1| type-a response regulator [Populus trichocarpa]
gi|222869140|gb|EEF06271.1| type-a response regulator [Populus trichocarpa]
gi|309951242|emb|CBX43991.1| putative A-type response regulator 10 [Populus x canadensis]
Length = 223
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 74/124 (59%), Gaps = 9/124 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL--KGRPRN-------IDLIL 82
L VL V+ R+++ LL+ SS +VT V G +A + L G + I+LI+
Sbjct: 29 LHVLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSVGFNDLKINLIM 88
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + IPV++MSS++ ++ + +C+ GA +Y++KPV+ ++
Sbjct: 89 TDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILARIDRCLEEGAEEYILKPVKLSD 148
Query: 143 LRNL 146
++ +
Sbjct: 149 VKRI 152
>gi|222631501|gb|EEE63633.1| hypothetical protein OsJ_18450 [Oryza sativa Japonica Group]
Length = 633
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN-IDLILTE 84
F R L VL+V+ D + + + +L + Y VT +A + + P + +++T+
Sbjct: 19 FFGR--LHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHIVMTD 76
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
V + + GF LL H I +PVIM S + V V + +M GA DY+VKP+ ++
Sbjct: 77 VHMSGMDGFDLL-----HRINGRVPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIK 131
Query: 145 NLWQHVWRRQSSMVSGN 161
+W+HV R + S + N
Sbjct: 132 FIWKHVLRWRLSALPAN 148
>gi|356541574|ref|XP_003539249.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 187
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 23/158 (14%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLK--GRPRN-------------- 77
++ DDS R ++ LL+ SS+ VTAV G KA + L RN
Sbjct: 11 VLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALKFLGLVEEKRNEEPPPCIALESHQD 70
Query: 78 --IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++LI+T+ +P ++G+ LL + E + K+IPV++MSS++ + + +C+ GA ++ +
Sbjct: 71 VEVNLIITDYCMPEMTGYDLLRKIKESKSLKDIPVVIMSSENVPARINRCLEEGADEFFL 130
Query: 136 KPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQKI 173
KPV+++++ L H+ + S V E Q SV + I
Sbjct: 131 KPVQQSDVNKLRPHLMK---SKVKDGEDQQISVEEIHI 165
>gi|326800911|ref|YP_004318730.1| Crp/Fnr family transcriptional regulator [Sphingobacterium sp. 21]
gi|326551675|gb|ADZ80060.1| transcriptional regulator, Crp/Fnr family [Sphingobacterium sp. 21]
Length = 347
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEV-LKGRPRNIDLILTEVDLPSISG 92
VL++E +D R+ +L + YRV + +G E+ LK +P D+IL ++ +P++ G
Sbjct: 4 VLIIEDNDDIRESTVEILELAGYRVFSATEGRSGVELALKNKP---DIILCDIMMPNLDG 60
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
+ +L L+ +H+ +IP I ++++ + + K M GA DYL KP EL N + R
Sbjct: 61 YGVLFLLGKHQETASIPFIFLTAKAERADMRKAMEMGADDYLTKPFDDVELLNAIETRLR 120
Query: 153 RQ 154
++
Sbjct: 121 KK 122
>gi|255573419|ref|XP_002527635.1| transcription factor, putative [Ricinus communis]
gi|223532940|gb|EEF34706.1| transcription factor, putative [Ricinus communis]
Length = 478
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
++ W+ F + LRVLL+E D + + + + L Y V+ + +A + +P +
Sbjct: 8 LSAWKDFPK--GLRVLLLEEDSISAEEIKSKLEAMDYIVSLFCNENEALSAISDKPESFH 65
Query: 80 LILTEVDLPSISG-FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
+ + EV + +G F L E K++P IM S+ +ST+ KC+ GA ++L KP+
Sbjct: 66 VAIVEVSTSNSNGNFKFL------ETAKDLPTIMTSNIHCLSTMMKCIALGAVEFLRKPL 119
Query: 139 RRNELRNLWQHV 150
+LRN+WQHV
Sbjct: 120 SEEKLRNIWQHV 131
>gi|386829209|ref|ZP_10116316.1| PAS domain S-box [Beggiatoa alba B18LD]
gi|386430093|gb|EIJ43921.1| PAS domain S-box [Beggiatoa alba B18LD]
Length = 511
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL-KGRPRNIDLILTEVDLPSISG 92
+L+V+ + Q + +LR+ +YR++ DG +A +++ K P DLIL ++ +P + G
Sbjct: 10 ILIVDDKSTNIQFLGMVLRQQNYRISVAQDGYQAIKIVDKIIP---DLILLDIMMPEMDG 66
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR-NLWQHVW 151
F + E+ KN+P+I ++++D + K GAADY+ KP L + H+
Sbjct: 67 FETCLKLKENPALKNVPIIFLTAKDDTEDILKGFQLGAADYITKPFNSAVLLARVATHIN 126
Query: 152 RRQSSMVSGNETQDESVG----QQKIEATSENDAASNHSSGYMACIQSKGEFI 200
RQ + + + Q + Q+K EN + ++ + ++G+F+
Sbjct: 127 LRQKTQLLEQQRQKTQIALQISQEKYRFLVEN------QTDFVIKLDAQGQFL 173
>gi|440797406|gb|ELR18493.1| multisensor hybrid histidine [Acanthamoeba castellanii str. Neff]
Length = 1015
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
+VLL + + R+ V LL Y V +V +GL+A VL+ + +DL+LT+V +P + G
Sbjct: 82 KVLLADDNFDMREYVARLL-APKYEVISVSNGLEALSVLRAHSQAVDLVLTDVMMPFLDG 140
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
F LL + + + +PVIM+S++ + + GA DYL KP EL
Sbjct: 141 FGLLKEIRAKDQTRTLPVIMLSARAGEEASVEGLDEGADDYLTKPFTAREL 191
>gi|260777772|ref|ZP_05886665.1| two component transcriptional regulator winged helix family [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605785|gb|EEX32070.1| two component transcriptional regulator winged helix family [Vibrio
coralliilyticus ATCC BAA-450]
Length = 250
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLVE D Q +T+LL+ S Y+VT + G +A LK N DLI+ +++LP + GF
Sbjct: 27 ILLVEDDRHLNQQLTSLLQDSRYQVTNLDCGAEALNCLK--QSNFDLIILDINLPEVDGF 84
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
LL + H N PVIM+++ + + + GA DY+ KP E+ + + RR
Sbjct: 85 GLLNFIRFH---SNTPVIMLTAYGAEEHRIRGLRYGADDYISKPCNFTEVSLRIEAILRR 141
>gi|363807796|ref|NP_001242179.1| uncharacterized protein LOC100818762 [Glycine max]
gi|255633210|gb|ACU16961.1| unknown [Glycine max]
Length = 172
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 26/157 (16%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL---KGRPRN----------- 77
+VL V+ R ++ LL+ SS+ VTA+ G KA + L + RN
Sbjct: 9 FQVLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGLVEDEQRNKEPPSIALESH 68
Query: 78 ----IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADY 133
++LI+T+ +P ++G+ LL + E + K+IPV++MSS++ + + +C+ GA ++
Sbjct: 69 QDVEVNLIITDYCMPEMTGYDLLKKIKESKSLKDIPVVIMSSENVPARINRCLEDGADEF 128
Query: 134 LVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQ 170
+KPV+++++ L H+ + ++ +DE V Q
Sbjct: 129 FLKPVQQSDVNKLRPHLLK--------SKVKDEEVQQ 157
>gi|46981318|gb|AAT07636.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038102|gb|AAT93905.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215769096|dbj|BAH01325.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 620
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN-IDLILTE 84
F R L VL+V+ D + + + +L + Y VT +A + + P + +++T+
Sbjct: 19 FFGR--LHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHIVMTD 76
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
V + + GF LL H I +PVIM S + V V + +M GA DY+VKP+ ++
Sbjct: 77 VHMSGMDGFDLL-----HRINGRVPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIK 131
Query: 145 NLWQHVWRRQSSMVSGN 161
+W+HV R + S + N
Sbjct: 132 FIWKHVLRWRLSALPAN 148
>gi|297816962|ref|XP_002876364.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322202|gb|EFH52623.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 149
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK-GRPR-----NIDLILTEV 85
L VL V+ + R+ + +L+ SS +VT +GL+A E L G P+ ++LI+T+
Sbjct: 20 LHVLAVDDNLIDRKFLERILKISSCKVTTAENGLRALEYLGLGDPQQTNVMKVNLIITDY 79
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
+P ++GF LL V E K +PV+++SS++ + + KC+ GA ++ KP++ +++
Sbjct: 80 CMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLSDVEK 139
Query: 146 LWQHVWRRQS 155
L H+ +S
Sbjct: 140 LKCHLLNCRS 149
>gi|343492741|ref|ZP_08731095.1| transcriptional regulatory protein CpxR [Vibrio nigripulchritudo
ATCC 27043]
gi|342826861|gb|EGU61268.1| transcriptional regulatory protein CpxR [Vibrio nigripulchritudo
ATCC 27043]
Length = 252
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
++LLVE D ++ALL Y VT+ G KA E LK + DLI+ +VDLP + G
Sbjct: 24 KLLLVEDDPDLNSQLSALLSSQQYEVTSYESGSKALECLKTH--SFDLIILDVDLPDVDG 81
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
F LL V EH + PV+M+++ + + + GA DY+ KP EL + + R
Sbjct: 82 FELLNYVREH---SSTPVVMLTAYGAEEHRIRGLRFGADDYVSKPCSFTELCLRIEGILR 138
Query: 153 RQSS 156
R S
Sbjct: 139 RTQS 142
>gi|162454291|ref|YP_001616658.1| response regulator [Sorangium cellulosum So ce56]
gi|161164873|emb|CAN96178.1| response regulator [Sorangium cellulosum So ce56]
Length = 464
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 21/150 (14%)
Query: 28 QRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDL 87
+R + RVL+V+ + S R + LLR+ Y V A DG++A EV RP D+++T++ +
Sbjct: 5 KRQSSRVLVVDDEASARSGLEKLLRQEGYTVDAAADGVEAVEVAAERP--PDVVITDLKM 62
Query: 88 PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV--------- 138
P + G ALL + E + +PVI++++ V++ M GA DYL KPV
Sbjct: 63 PRMDGVALLGKLREQD--PALPVIVVTAFGDVTSAVLAMRAGAEDYLTKPVDFDALLLTL 120
Query: 139 ----RRNELR----NLWQHVWRRQSSMVSG 160
R+ LR NL + + RQ V G
Sbjct: 121 ERALERSALRVEAENLRRQLRERQGEGVEG 150
>gi|115376892|ref|ZP_01464113.1| two-component hybrid sensor and regulator [Stigmatella aurantiaca
DW4/3-1]
gi|310825368|ref|YP_003957726.1| sensor protein [Stigmatella aurantiaca DW4/3-1]
gi|115366071|gb|EAU65085.1| two-component hybrid sensor and regulator [Stigmatella aurantiaca
DW4/3-1]
gi|309398440|gb|ADO75899.1| Sensor protein [Stigmatella aurantiaca DW4/3-1]
Length = 989
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R RVL+V+ + R + LL + S+ V AV DG+KA E L R + DLIL++V
Sbjct: 612 LSRPRARVLVVDDNADMRAYIVGLL-QPSFAVEAVADGVKALEFL--REQTPDLILSDVM 668
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+P + GF LL V K +P IM+S++ + GA DYLVKP EL
Sbjct: 669 MPRLGGFGLLREVRAKAEWKAVPFIMLSARTGEEASVEGFEAGADDYLVKPFSAREL 725
>gi|299534051|ref|ZP_07047403.1| CheA signal transduction histidine kinase [Comamonas testosteroni
S44]
gi|298717960|gb|EFI58965.1| CheA signal transduction histidine kinase [Comamonas testosteroni
S44]
Length = 2186
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 81/145 (55%), Gaps = 9/145 (6%)
Query: 8 DEELKEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKA 67
D EL+ ++G + E + L VL+V+ + R++ LL++ YRVT DGL+A
Sbjct: 2020 DGELQALSGGADLLGAEAAQTTVPL-VLVVDDSITVRRVTQRLLQREGYRVTLAADGLQA 2078
Query: 68 WEVLKG-RPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCM 126
E L+ RP L+L+++++P + GF LL + + + +PV+M++S+ ++ ++ M
Sbjct: 2079 MERLQDERP---TLVLSDIEMPRMDGFDLLRNIRADQTLEGMPVVMITSR--IAQKHREM 2133
Query: 127 MR--GAADYLVKPVRRNELRNLWQH 149
R GA YL KP EL L QH
Sbjct: 2134 ARDLGANHYLGKPYSDEELLGLIQH 2158
>gi|117923557|ref|YP_864174.1| response regulator receiver protein [Magnetococcus marinus MC-1]
gi|117607313|gb|ABK42768.1| response regulator receiver protein [Magnetococcus marinus MC-1]
Length = 309
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 62/113 (54%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLV+ +I++ LR YR+ DG +AWE+L+ P N +L + +P + G
Sbjct: 6 ILLVDDQPINLEILSEYLRDEGYRLCIARDGQEAWELLEKNPLNFHALLLDRMMPRMDGM 65
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
+L + +H+ + +PVIM +++ S + + + GA YL KP R+ LR +
Sbjct: 66 EVLARMKQHDELRMVPVIMQTAKASQEEIVEGLEGGAHYYLTKPYRKEMLRAI 118
>gi|358345518|ref|XP_003636824.1| Response regulator [Medicago truncatula]
gi|358348887|ref|XP_003638473.1| Response regulator [Medicago truncatula]
gi|355502759|gb|AES83962.1| Response regulator [Medicago truncatula]
gi|355504408|gb|AES85611.1| Response regulator [Medicago truncatula]
Length = 240
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ +RVL V+ D + + LR Y VT A +L+ DL++ +V LP
Sbjct: 10 IGMRVLAVDGDSTHLSDLETRLRSCQYHVTTTSQAKTALTMLRENKDKFDLVIADVHLPD 69
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVS-TVYKCMMRGAADYLVKPVRRNELRNLWQ 148
+ G LL LV ++PV++M S+ S + V K + GA+D+LVKPVR EL+ +WQ
Sbjct: 70 MDGLKLLELVEL---ETDLPVVVMLSESSDNELVMKAVFHGASDFLVKPVRLQELKTIWQ 126
Query: 149 HVWRRQ 154
HV R++
Sbjct: 127 HVIRKK 132
>gi|297847198|ref|XP_002891480.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
gi|297337322|gb|EFH67739.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
Length = 530
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + +T + ++++ +Y+VT D KA L I++++ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVTIETDAEKALAYLTSCKHEINIVIWDFHMPGIDGL 95
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
L + ++PV++MS + +V K + GA DY+VKPV+ + N+WQH+ R+
Sbjct: 96 QALKSIGSK---MDLPVVIMSDDNQTESVMKATINGACDYVVKPVKEEVIANIWQHIVRK 152
>gi|322435761|ref|YP_004217973.1| response regulator receiver modulated metal dependent
phosphohydrolase [Granulicella tundricola MP5ACTX9]
gi|321163488|gb|ADW69193.1| response regulator receiver modulated metal dependent
phosphohydrolase [Granulicella tundricola MP5ACTX9]
Length = 366
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
RVL+V+ + + R IVTALL + Y V A L+G P DL+++++ +P + G
Sbjct: 5 RVLVVDDEAAVRGIVTALLERMEYEVVTANGVSAALNYLQGDP-AFDLVMSDIMMPGVDG 63
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL-----RNLW 147
ALL V+ +PV+M ++ + RGA DYL+KP R++L R +
Sbjct: 64 LALLDAVVAD--YPGMPVVMFTAVHDIHVATNAFRRGATDYLLKPFERSQLASVVGRAVE 121
Query: 148 QHVWRRQSSMVSGNETQDESVGQQKIEATSEN 179
R+QSS N + S ++ AT ++
Sbjct: 122 HGRLRKQSSAYRQNLEEIVSSRTGQLRATMQD 153
>gi|284036190|ref|YP_003386120.1| Crp/Fnr family transcriptional regulator [Spirosoma linguale DSM
74]
gi|283815483|gb|ADB37321.1| transcriptional regulator, Crp/Fnr family [Spirosoma linguale DSM
74]
Length = 350
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEV-LKGRPRNIDLILTEVDLPSISG 92
+LL+E +D R+ +L S YRVT +G E+ L RP DLI+ ++ +P + G
Sbjct: 4 ILLIEDNDIIRENTAEILELSGYRVTTANNGKAGIELALVDRP---DLIICDIMMPVLDG 60
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
+ +L +V ++ IP I ++++ + M GA DYL KP +EL + +
Sbjct: 61 YGVLHIVNKNPALTGIPFIFLTAKSERDDFRRGMELGADDYLTKPFSESELLSAIESRLN 120
Query: 153 RQSSMVSGNETQDESVGQQKIEATS 177
R ++++S N T +E + ++ S
Sbjct: 121 RFTTLLSDNSTGEEGLSHSFVDTQS 145
>gi|434395233|ref|YP_007130180.1| multi-sensor hybrid histidine kinase [Gloeocapsa sp. PCC 7428]
gi|428267074|gb|AFZ33020.1| multi-sensor hybrid histidine kinase [Gloeocapsa sp. PCC 7428]
Length = 1674
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKG-RPRNIDLILTEVDLPSISG 92
+LLV+ + R V LL + Y+V AV DG+ A E ++ RP DL+LT+V +P + G
Sbjct: 640 ILLVDDNADMRDYVKRLLSQQ-YQVKAVADGIAALEAIRQQRP---DLVLTDVMMPRLDG 695
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
F LL + I + IP+I++S++ + + + GA DYL+KP EL
Sbjct: 696 FGLLRELRTDPITREIPIILLSARAGEESCVEGLAAGADDYLIKPFSAREL 746
>gi|356555024|ref|XP_003545839.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 179
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 24/156 (15%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLK-----------------GRPR 76
++ DDS R ++ LL+ SS+ VT V KA + L +
Sbjct: 11 VLAVDDSIIDRMLIERLLKTSSFHVTTVDSATKALKFLGLVEDELRTFDTTVASEIHQDV 70
Query: 77 NIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+I+LI+T+ +P ++G+ LL + E + KNIPV++MSS++ S + +C+ GA ++ +K
Sbjct: 71 DINLIITDYCMPGMTGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCLEEGAEEFFLK 130
Query: 137 PVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQK 172
PV++ ++ L H+ + + E QD+ ++
Sbjct: 131 PVQQADVNKLKPHLMKSR-----AKEEQDQPFNNKR 161
>gi|434399263|ref|YP_007133267.1| CheA signal transduction histidine kinase [Stanieria cyanosphaera PCC
7437]
gi|428270360|gb|AFZ36301.1| CheA signal transduction histidine kinase [Stanieria cyanosphaera PCC
7437]
Length = 1078
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+V+ S RQ + L+K S +V +GL A E L + I L++ ++++P ++GF
Sbjct: 951 LLVVDDSSSLRQTIAMSLQKISNQVIQAENGLNALEKLH-QSEEIGLVVCDLEMPFMNGF 1009
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
L + +H NIPVI+++S+DS + GAA YL+KP R EL
Sbjct: 1010 QFLKAIRQHHNFSNIPVIILTSRDSAKHRKLALELGAAAYLIKPYREEEL 1059
>gi|294674076|ref|YP_003574692.1| response regulator PhoB [Prevotella ruminicola 23]
gi|294472329|gb|ADE81718.1| response regulator PhoB [Prevotella ruminicola 23]
Length = 121
Score = 69.7 bits (169), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M ++L+++ ++ ++++ L S Y V +PDGL+ + L+ DLI++++ +P
Sbjct: 1 MKKKILILDDKETIAKVLSIYL-MSDYDVQWLPDGLQGVKWLQA-GNTPDLIISDIRMPG 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+ G L + ++E+ K IPVIM+SS+DS S + + GA DY+VKP EL+
Sbjct: 59 MRGDDFLEWIKQNELFKQIPVIMLSSEDSTSERIRLLEIGAEDYIVKPFNPMELK 113
>gi|118351766|ref|XP_001009158.1| Response regulator receiver domain containing protein [Tetrahymena
thermophila]
gi|89290925|gb|EAR88913.1| Response regulator receiver domain containing protein [Tetrahymena
thermophila SB210]
Length = 135
Score = 69.7 bits (169), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M++ VL E D+ R VT +L+ +Y+VTAV +G A ++L + + ID++L ++ +P
Sbjct: 1 MSIHVLFAEDDNFQRLAVTHILQLCNYQVTAVENGRIARDILLKQDQKIDIVLLDIRMPE 60
Query: 90 ISGFALLTLVMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
+ LL+ + EH E + IPV+++S D + + RGA D+++KP++ + + +
Sbjct: 61 MDALELLSFMQEHSENLQKIPVVIISLNDLEIQTF--LERGAKDFIIKPMKIQNAKAIAK 118
Query: 149 HV 150
+V
Sbjct: 119 YV 120
>gi|167829254|ref|ZP_02460725.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei 9]
Length = 661
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 535 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDV--FDLVVTDID 592
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 593 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 642
>gi|424905686|ref|ZP_18329189.1| chemotaxis histidine kinase/response regulator [Burkholderia
thailandensis MSMB43]
gi|390928579|gb|EIP85983.1| chemotaxis histidine kinase/response regulator [Burkholderia
thailandensis MSMB43]
Length = 778
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G + DL++T++D
Sbjct: 652 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGD--SFDLVVTDID 709
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K +PV+++S +D + + GA YL K
Sbjct: 710 MPRMDGIELVTLIKGDPLLKAVPVMIVSYKDRDEDRRRGLEAGADYYLAK 759
>gi|224135725|ref|XP_002322145.1| type-a arp3-like response regulator [Populus trichocarpa]
gi|222869141|gb|EEF06272.1| type-a arp3-like response regulator [Populus trichocarpa]
Length = 192
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 74/124 (59%), Gaps = 9/124 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL--KGRPRN-------IDLIL 82
L VL V+ R+++ LL+ SS +VT V G +A + L G + I+LI+
Sbjct: 29 LHVLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSVGFNDLKINLIM 88
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + IPV++MSS++ ++ + +C+ GA +Y++KPV+ ++
Sbjct: 89 TDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILARIDRCLEEGAEEYILKPVKLSD 148
Query: 143 LRNL 146
++ +
Sbjct: 149 VKRI 152
>gi|167916002|ref|ZP_02503093.1| chemotaxis-related histidine kinase protein [Burkholderia
pseudomallei 112]
Length = 656
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 530 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDV--FDLVVTDID 587
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 588 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 637
>gi|451819198|ref|YP_007455399.1| Two component transcriptional regulator, winged helix family
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451785177|gb|AGF56145.1| Two component transcriptional regulator, winged helix family
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 225
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+VE D ++ +A+L K+ Y+ T V DG++A L IDLIL+++ +P++ GF
Sbjct: 4 ILIVEDDKELCELFSAVLLKNGYKTTCVNDGIEALNALD--KEYIDLILSDIMMPNMDGF 61
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
L+ + + + N+PV+M+++++S + + G DY++KP+ NE+ + RR
Sbjct: 62 ELIKSIRDAQF--NLPVLMITAKESFQDIKRGFSLGIDDYMIKPINVNEMVLRVGALLRR 119
Query: 154 QSSMVSGNETQDESVGQQKIEATS 177
+ NE + + VG+ +E S
Sbjct: 120 AKII---NEKK-QYVGKTLLEYDS 139
>gi|389693437|ref|ZP_10181531.1| chemotaxis protein histidine kinase-like protein [Microvirga sp.
WSM3557]
gi|388586823|gb|EIM27116.1| chemotaxis protein histidine kinase-like protein [Microvirga sp.
WSM3557]
Length = 737
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%)
Query: 16 GNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRP 75
G G+A+W +R A +L+V+ +TR + ++L Y V DG+ A VL+
Sbjct: 601 GGLGLARWNPEEERRARTILVVDDSITTRTLEKSILEAQGYEVLLSVDGIDALHVLRSGE 660
Query: 76 RNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
+DL++ +V++P + GF LL V +PVI+M+S+ V K + GA+ Y+
Sbjct: 661 AIVDLVIADVEMPRMDGFGLLQAVKNDPRLSTLPVILMTSRADPEDVRKGLDLGASAYIT 720
Query: 136 K 136
K
Sbjct: 721 K 721
>gi|423120203|ref|ZP_17107887.1| hypothetical protein HMPREF9690_02209 [Klebsiella oxytoca 10-5246]
gi|376397042|gb|EHT09678.1| hypothetical protein HMPREF9690_02209 [Klebsiella oxytoca 10-5246]
Length = 246
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+V+ D R++VT L KS YR T +G W VL+G ++DLI+ ++ LP G
Sbjct: 7 ILVVDDDRDIRELVTDYLNKSGYRATGAANGKAMWSVLQG--HHVDLIVLDIMLPGDDGL 64
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
L + H +NIPV+M++++ S + GA DYLVKP EL + + RR
Sbjct: 65 ILCRQLRSHG-QQNIPVLMLTARTDDSDRILGLEMGADDYLVKPFVARELLARIKAILRR 123
Query: 154 QSSM 157
++
Sbjct: 124 TRAL 127
>gi|148608690|gb|ABQ95669.1| response regulator, partial [Malus x domestica]
Length = 209
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 12/127 (9%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN----------IDLILT 83
++ DDS R+++ LL+ SS RVT V G +A + L +DLI+T
Sbjct: 2 VLAVDDSLVDRKVIERLLKISSCRVTTVDSGRRALQFLGLDEEKSSTAGFDGLKVDLIIT 61
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + E K PV++MSS++ ++ + +C+ GA D++VKPV+ ++
Sbjct: 62 DYCMPGMTGYELLKKIKESSTFKATPVVIMSSENVLARIDRCLEEGAEDFIVKPVKLADV 121
Query: 144 RNLWQHV 150
+ L ++
Sbjct: 122 KRLKDYM 128
>gi|388506210|gb|AFK41171.1| unknown [Lotus japonicus]
Length = 174
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLK---------GRPRNIDLILTE 84
++ DDS R ++ LL+ SS+ VTAV KA L + +++LI+T+
Sbjct: 13 VLAVDDSLIDRMLIERLLKTSSFHVTAVDSASKALNFLGLVEDMASEIHQDVDVNLIITD 72
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+P ++G+ LL + E + K+IPV++MSS++ S + +C+ GA ++ +KPV+ +++
Sbjct: 73 YCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVH 132
Query: 145 NLWQHVWR 152
L H+ +
Sbjct: 133 KLKPHLMK 140
>gi|344176123|emb|CCA87286.1| response regulator receiver ATP-binding histidine kinase, cheA
family [Ralstonia syzygii R24]
Length = 772
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + R++ LL K Y VT DG+ W L+G P DL++T++D+P + G
Sbjct: 651 VLVVDDSLTVRELERKLLEKRGYAVTVAVDGMDGWNALRGTP--FDLVVTDIDMPRMDGI 708
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
L+TL+ K +PV+++S +D ++ + GA YL K
Sbjct: 709 ELVTLIKRDAALKALPVMIVSYKDREEDRHRGLEAGADYYLAK 751
>gi|148608687|gb|ABQ95668.1| response regulator, partial [Malus x domestica]
Length = 212
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 12/127 (9%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN----------IDLILT 83
++ DDS R+++ LL+ SS RVT V G +A + L +DLI+T
Sbjct: 2 VLAVDDSLVDRKVIERLLKISSCRVTTVDSGRRALQFLGLDEEKSSTAGFDGLKVDLIIT 61
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + E K PV++MSS++ ++ + +C+ GA D++VKPV+ ++
Sbjct: 62 DYCMPGMTGYELLKKIKESSTFKATPVVIMSSENVLARIDRCLEEGAEDFIVKPVKLADV 121
Query: 144 RNLWQHV 150
+ L ++
Sbjct: 122 KRLKDYM 128
>gi|167583086|ref|ZP_02375960.1| chemotaxis sensor histidine kinase, putative [Burkholderia
thailandensis TXDOH]
Length = 685
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R RVL+V+ + R++ LL K Y VT DG+ W ++G + DL++T++D
Sbjct: 559 LARRTKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGD--SFDLVVTDID 616
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 617 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 666
>gi|357163783|ref|XP_003579845.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 224
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKS----SYRVTAVPDGLKAWEVLKGRP----RNIDLIL 82
+RVLLV+ R++V +L S S+ V AV KA E L + ++ID++L
Sbjct: 9 VMRVLLVDDSPVDRKVVELVLGSSACAGSFHVIAVDSAKKAMEFLGLKDGKEQQDIDMVL 68
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + K IPVI+MSS++ + +C+ GA DY+VKP+R +
Sbjct: 69 TDYCMPEMTGYDLLKAIKALSPLKPIPVIVMSSENEPQRISRCLKAGAEDYIVKPLRSKD 128
Query: 143 LRNLWQHVWRRQSSMVSGNETQDESVGQQKIEA 175
+ L S V +T +V ++K+ A
Sbjct: 129 VPRL------MSCSNVKPKDTLCNTVSKKKLPA 155
>gi|224372199|ref|YP_002606571.1| chemotaxis response regulator [Nautilia profundicola AmH]
gi|223588330|gb|ACM92066.1| chemotaxis response regulator [Nautilia profundicola AmH]
Length = 125
Score = 69.7 bits (169), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYR-VTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
+++L+V+ + R+I+ L + Y+ V DG++AWEV++ P +I +++T+ ++P++
Sbjct: 1 MKILVVDDSSTMRRIIVNTLARLGYKDVVQAADGVEAWEVMQANP-DIGVVITDWNMPNM 59
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+G L+ + E K+IP+IM++++ + V + G +Y+VKP L+ Q V
Sbjct: 60 NGLELVKKIRAEEKYKDIPIIMVTTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLQAV 119
>gi|452851441|ref|YP_007493125.1| Response regulator receiver protein [Desulfovibrio piezophilus]
gi|451895095|emb|CCH47974.1| Response regulator receiver protein [Desulfovibrio piezophilus]
Length = 122
Score = 69.7 bits (169), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
MA +L+V+ + R +V +++K ++VT+ DGL E L +DLI+++V++P
Sbjct: 1 MAKHILIVDDSKTVRNLVAFIMKKEGFKVTSAEDGLDGLEKLYS-ATEVDLIVSDVNMPR 59
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL-RNL 146
+ G + V E E ++IP++++S++ + + GA Y+VKP + +L RN+
Sbjct: 60 MDGLTFIKTVREQEAYRDIPIVVLSTEGQDKDIQTGLTVGANLYMVKPAQPEKLVRNV 117
>gi|167840530|ref|ZP_02467214.1| chemotaxis histidine kinase/response regulator [Burkholderia
thailandensis MSMB43]
Length = 602
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G + DL++T++D
Sbjct: 476 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGD--SFDLVVTDID 533
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K +PV+++S +D + + GA YL K
Sbjct: 534 MPRMDGIELVTLIKGDPLLKAVPVMIVSYKDRDEDRRRGLEAGADYYLAK 583
>gi|256751275|ref|ZP_05492155.1| response regulator receiver modulated diguanylate cyclase
[Thermoanaerobacter ethanolicus CCSD1]
gi|320115595|ref|YP_004185754.1| diguanylate cyclase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|326390556|ref|ZP_08212112.1| response regulator receiver modulated diguanylate cyclase
[Thermoanaerobacter ethanolicus JW 200]
gi|345017994|ref|YP_004820347.1| response regulator receiver modulated diguanylate cyclase
[Thermoanaerobacter wiegelii Rt8.B1]
gi|256749830|gb|EEU62854.1| response regulator receiver modulated diguanylate cyclase
[Thermoanaerobacter ethanolicus CCSD1]
gi|319928686|gb|ADV79371.1| diguanylate cyclase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325993381|gb|EGD51817.1| response regulator receiver modulated diguanylate cyclase
[Thermoanaerobacter ethanolicus JW 200]
gi|344033337|gb|AEM79063.1| response regulator receiver modulated diguanylate cyclase
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 310
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGR-PRNIDLILTEVDLPSISG 92
+L+V+ + TR+I+ +L + Y V DG +A ++ + + P D+++ ++ +P ++G
Sbjct: 6 ILIVDDNKLTRKILKDILENAGYGVLEAKDGEEALQIYRNKLP---DMVILDIVMPGMNG 62
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL----RNLWQ 148
F LL ++ + E +P+I+++SQD+ K + GA DYLVKP EL NL+Q
Sbjct: 63 FDLLRILRKEEENLMLPIILLTSQDNFEEKIKGLELGADDYLVKPFNDKELLFKVNNLFQ 122
Query: 149 HV 150
+
Sbjct: 123 RI 124
>gi|167037177|ref|YP_001664755.1| response regulator receiver modulated diguanylate cyclase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|166856011|gb|ABY94419.1| response regulator receiver modulated diguanylate cyclase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
Length = 318
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGR-PRNIDLILTEVDLPSISG 92
+L+V+ + TR+I+ +L + Y V DG +A ++ + + P D+++ ++ +P ++G
Sbjct: 14 ILIVDDNKLTRKILKDILENAGYGVLEAKDGEEALQIYRNKLP---DMVILDIVMPGMNG 70
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL----RNLWQ 148
F LL ++ + E +P+I+++SQD+ K + GA DYLVKP EL NL+Q
Sbjct: 71 FDLLRILRKEEENLMLPIILLTSQDNFEEKIKGLELGADDYLVKPFNDKELLFKVNNLFQ 130
Query: 149 HV 150
+
Sbjct: 131 RI 132
>gi|254508379|ref|ZP_05120500.1| response regulator receiver domain protein [Vibrio parahaemolyticus
16]
gi|219548692|gb|EED25696.1| response regulator receiver domain protein [Vibrio parahaemolyticus
16]
Length = 383
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 33 RVLLVEADDS--TRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
R ++V ADD ++I+ +L ++V +G++A ++K + LIL ++D+P +
Sbjct: 262 RPIVVVADDQPVMQKIIATILEPRGFKVELASNGVEA--IMKAKVMIPQLILLDIDMPIM 319
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
G A L + + EI KNIPVIM++S S + + GA+DY+VKP R + L
Sbjct: 320 DGLATLQAMKQVEITKNIPVIMLTSHADKSMIQASIDNGASDYVVKPTRADLL 372
>gi|449440724|ref|XP_004138134.1| PREDICTED: two-component response regulator ARR5-like [Cucumis
sativus]
gi|449477360|ref|XP_004155001.1| PREDICTED: two-component response regulator ARR5-like [Cucumis
sativus]
Length = 227
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK----------GRPRNIDLI 81
L VL V+ R+++ LL+ SS VT V G A + L ++LI
Sbjct: 30 LHVLAVDDSFVDRKVIERLLKSSSCEVTVVESGRSALQYLGLDGETNSVQFSSALKVNLI 89
Query: 82 LTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
+T+ +P ++G+ LL + E + IPV++MSS++ ++ + C+ GA +++VKPV+ +
Sbjct: 90 ITDYSMPEMTGYELLKKIKESSAFREIPVVIMSSENIMARIDSCLKEGAEEFIVKPVKLS 149
Query: 142 ELRNLWQHVW 151
+++ L +
Sbjct: 150 DVKRLKDFIM 159
>gi|218438945|ref|YP_002377274.1| multi-sensor signal transduction histidine kinase [Cyanothece sp.
PCC 7424]
gi|218171673|gb|ACK70406.1| multi-sensor signal transduction histidine kinase [Cyanothece sp.
PCC 7424]
Length = 1383
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 80/146 (54%), Gaps = 9/146 (6%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+LL + + R+ V LL + Y V V DG+ A E ++ P DL+L++V +P ++G
Sbjct: 631 RILLADDNGDMREYVKRLLSQY-YEVETVADGIAALEAIRRHPP--DLVLSDVMMPRLNG 687
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
F LL + + + + +P+I++S++ ++ + + GA DYLVKP EL + R
Sbjct: 688 FELLQELRRNPLTEELPIILLSARAGEESLVEGLKSGADDYLVKPFSAREL------LAR 741
Query: 153 RQSSMVSGNETQDESVGQQKIEATSE 178
++++ Q + +QK+ A +E
Sbjct: 742 IEATLKMAQLRQQAAQKEQKLRAEAE 767
>gi|374300705|ref|YP_005052344.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio africanus str. Walvis Bay]
gi|332553641|gb|EGJ50685.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio africanus str. Walvis Bay]
Length = 477
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + R +V A+L + +RV DG A +L+ P D++L ++ LP + G
Sbjct: 15 VLVVDDEPGHRLMVRAVLEDNGWRVAEAADGGSALRILRSGPAP-DVVLLDMRLPDMDGL 73
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW-- 151
A+L + E+ +PV+M+++ SV + + M +GA DYL KP +EL + W
Sbjct: 74 AILRSL--RELRPGLPVVMLTAFGSVGSAVEAMKKGAYDYLTKPADNDELEAVLDKAWQY 131
Query: 152 --------RRQSSMVSGNETQDESVGQQKIEATSENDAAS 183
R + + SG E + +++E E A S
Sbjct: 132 GQLLRENERLRGEIQSGPEIIGQGPAMRQLEELIEQVAPS 171
>gi|251779963|ref|ZP_04822883.1| response regulator [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243084278|gb|EES50168.1| response regulator [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 218
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M + VL++E D++ ++ L Y+ + DGL+A+ +LK P DLIL ++ LP
Sbjct: 1 MKINVLIIEDDEAISNLIKINLSMVGYKSKQLFDGLEAFNLLKEEP--FDLILMDIMLPG 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF L+ + + NIPVI +++++ ++ + GA DY+VKP EL +
Sbjct: 59 MDGFELMKKIKDL----NIPVIFLTAKNGLADKVTGLKSGAEDYIVKPFETVELLARIEI 114
Query: 150 VWRRQSS 156
V RR S
Sbjct: 115 VLRRYSK 121
>gi|242280189|ref|YP_002992318.1| response regulator receiver protein [Desulfovibrio salexigens DSM
2638]
gi|242123083|gb|ACS80779.1| response regulator receiver protein [Desulfovibrio salexigens DSM
2638]
Length = 122
Score = 69.3 bits (168), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M +L+V+ + R +V +++K ++VT DGL E L + +DLI+++V++P
Sbjct: 1 MPKHILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKLYSLDK-VDLIISDVNMPR 59
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ GF + V E + K+IP+I++S++ + + GA Y+VKP + ++
Sbjct: 60 MDGFTYIKTVREQDAYKDIPIIVLSTEGQEKDIQTGLSLGANLYMVKPAQPEKM 113
>gi|144897344|emb|CAM74208.1| Stage II sporulation E [Magnetospirillum gryphiswaldense MSR-1]
Length = 570
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R L+V+ + R+++ A LR + + DG++AW +L+ P + D+IL + +P ++G
Sbjct: 7 RALVVDDERMNREVIVANLRAAGFETVMAEDGVQAWGILQAHPGSFDVILLDRRMPRMNG 66
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
LLT + + +IPVIM ++ V + + GA YL KP+ R L
Sbjct: 67 MELLTRLKADDKLAHIPVIMQTAYAETEDVSEGIKAGAYYYLAKPLDRRLL 117
>gi|296535791|ref|ZP_06897952.1| response regulator [Roseomonas cervicalis ATCC 49957]
gi|296263859|gb|EFH10323.1| response regulator [Roseomonas cervicalis ATCC 49957]
Length = 259
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+VE D R ++ LLR++ +RVT +G + W+ + P +DL+L +V LP SG
Sbjct: 27 ILVVEDDGEMRTLIAKLLRQNGFRVTGARNGAEMWDTMALSP--VDLVLLDVMLPGQSGL 84
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
L + +P+IM++++ + + GA DYL KP R EL + V RR
Sbjct: 85 DLCRTIRAR---SEVPIIMVTARGEEADRVVGLELGADDYLPKPFSRPELLARIRAVLRR 141
Query: 154 ------QSSMVSGNET--QDESVGQQKIEATSENDAASNHSSG 188
++ MVSG+ D + ++ E + + +A + SSG
Sbjct: 142 AQAGANRAGMVSGDRMVFSDWVLDTRRRELAAPDGSAVDLSSG 184
>gi|436841790|ref|YP_007326168.1| Response regulator receiver protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432170696|emb|CCO24067.1| Response regulator receiver protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 122
Score = 69.3 bits (168), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M +L+V+ + R +V +++K ++VT DGL E L + +DLI+++V++P
Sbjct: 1 MPKHILIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKLYSAEK-VDLIISDVNMPR 59
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ GF + V E + K+IP+I++S++ + + GA Y+VKP + ++
Sbjct: 60 MDGFTYIKTVREQDAYKDIPIIVLSTEGQEKDIQTGLNLGANLYMVKPAQPEKM 113
>gi|147782854|emb|CAN61302.1| hypothetical protein VITISV_003290 [Vitis vinifera]
Length = 594
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 38/177 (21%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYR--------------------------------- 57
A+RV++V+ D IV +L+ Y+
Sbjct: 20 AIRVMVVDDDIICLSIVAGMLKTWKYQDMLNVVFCNFIKIIRQGCIRGEEASTRNGISSS 79
Query: 58 VTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQD 117
V +V + A L+ R L++T+V +P + GF V E N+PV+MMS+ D
Sbjct: 80 VVSVKNAEDALITLRTRSNFFHLVVTDVHMPKMDGFEFQKQVREE---FNLPVVMMSADD 136
Query: 118 SVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW--RRQSSMVSGNETQDESVGQQK 172
S++ + + GAA Y+VKPV ++L++LWQ+ R+ S V E Q++ ++K
Sbjct: 137 KESSILRGLEAGAAFYIVKPVNYDDLKDLWQYALSPRKGSVSVXHEEMQNKRDSKKK 193
>gi|125552239|gb|EAY97948.1| hypothetical protein OsI_19866 [Oryza sativa Indica Group]
Length = 604
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN-IDLILTE 84
F R L VL+V+ D + + + +L + Y VT +A + + P + +++T+
Sbjct: 19 FFGR--LHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHIVMTD 76
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
V + + GF LL H I +PVIM S + V V + +M GA DY+VKP+ ++
Sbjct: 77 VHMSGMDGFDLL-----HRINGRVPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIK 131
Query: 145 NLWQHVWRRQSSMVSGN 161
+W+HV R + S + N
Sbjct: 132 FIWKHVLRWRLSALPAN 148
>gi|441415442|dbj|BAM74645.1| type-A response regulator [Torenia fournieri]
Length = 213
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 74/133 (55%), Gaps = 16/133 (12%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL--------------KGRPRNID 79
++ DDS R+++ L + SS +VTAV G +A + L ++
Sbjct: 17 VLAVDDSLVDRKVIEKLFKISSCKVTAVESGSRALQYLGLDGDLNDANNSVGSYEGVKLN 76
Query: 80 LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
LI+T+ +P ++GF LL + + + IPV++MSS++ ++ + +C+ GA ++LVKPV+
Sbjct: 77 LIVTDYSMPGMTGFELLQKIKGSKALREIPVVVMSSENVLARIDRCLEEGAEEFLVKPVK 136
Query: 140 RNELRNLWQHVWR 152
++++ L V +
Sbjct: 137 LSDVKRLRDFVIK 149
>gi|403718067|ref|ZP_10943094.1| hypothetical protein KILIM_081_00190 [Kineosphaera limosa NBRC
100340]
gi|403208733|dbj|GAB97777.1| hypothetical protein KILIM_081_00190 [Kineosphaera limosa NBRC
100340]
Length = 132
Score = 69.3 bits (168), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+RV++ + D R++VT L+++ Y + AV DG +AW + P L + +V +P +S
Sbjct: 11 MRVVVADDDADIRELVTFKLQQAGYEIDAVADGAQAWASISEAPPR--LAVLDVMMPGLS 68
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
G +L V E E K +PVI+++++ S V GA DY++KP EL
Sbjct: 69 GLDVLRKVREDERTKTVPVILLTARSRDSDVDSGFATGATDYVIKPFSPREL 120
>gi|346703278|emb|CBX25376.1| hypothetical_protein [Oryza brachyantha]
Length = 215
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 21/142 (14%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYR-------VTAVPDGLKAWEVLKGRPRN------- 77
VL V+ R+++ LL+ SS++ VT V G KA E L
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQGFGFVGVVTTVDSGSKALEFLGLHAHEDSPISVQ 68
Query: 78 -------IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGA 130
++LI+T+ +P ++G+ LL + E ++IPV++MSS++ S + +C+ GA
Sbjct: 69 ADQQEAAVNLIITDYCMPGMTGYDLLKKIKESSCLRDIPVVIMSSENIPSRINRCLEEGA 128
Query: 131 ADYLVKPVRRNELRNLWQHVWR 152
++ +KPVR +++ L H+ +
Sbjct: 129 DEFFLKPVRLSDMSKLKPHILK 150
>gi|39726361|gb|AAR30123.1| putative histidine kinase HHK6p [Gibberella moniliformis]
Length = 1369
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 28 QRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI----DLILT 83
+R + VL+VE + ++I T + K ++VTA +G +A E L G + I D+IL
Sbjct: 1101 ERAKIHVLVVEDNPINQKIATKTIGKLGFQVTAAWNGKEALEYLAGVHKGIKQKPDIILM 1160
Query: 84 EVDLPSISGFALLTLVMEH----EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+V +P I G+ L+ H + +++P++ M++ KC G DYL KPVR
Sbjct: 1161 DVQMPIIDGYKCTHLLRHHMPYKPLVEDVPIVAMTASAIQGDREKCTKAGMDDYLAKPVR 1220
Query: 140 RNELRNL---WQHVWRRQSS 156
L + W H RR S+
Sbjct: 1221 GVILEKMLLRWCHARRRTSA 1240
>gi|134299175|ref|YP_001112671.1| two component sigma-54 specific Fis family transcriptional
regulator [Desulfotomaculum reducens MI-1]
gi|134051875|gb|ABO49846.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfotomaculum reducens MI-1]
Length = 455
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWE-VLKGRPRNIDLILTEVDLPSIS 91
RVL+V+ ++S RQ + +L + Y+V +GL+ + +++ +P D+++T++ +P
Sbjct: 5 RVLVVDDEESVRQFLYDVLTEEKYQVATAANGLQCQDKLMQFKP---DVLITDIRMPEKD 61
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
GF LL + + NIPVI+M++ + K M GA DY+VKP +E +L Q
Sbjct: 62 GFGLLEQIKSAGL--NIPVILMTAFGTTEVAIKAMKLGAFDYIVKPFDLDEFLDLIQRAV 119
Query: 152 RRQSSMVSGNETQD 165
+ ++ + + Q+
Sbjct: 120 AQSDTVATFPQAQE 133
>gi|115377600|ref|ZP_01464797.1| multi-sensor Hybrid Histidine Kinase [Stigmatella aurantiaca
DW4/3-1]
gi|310820429|ref|YP_003952787.1| sensor protein [Stigmatella aurantiaca DW4/3-1]
gi|115365401|gb|EAU64439.1| multi-sensor Hybrid Histidine Kinase [Stigmatella aurantiaca
DW4/3-1]
gi|309393501|gb|ADO70960.1| Sensor protein [Stigmatella aurantiaca DW4/3-1]
Length = 1020
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+R+LL + + R+ V LL + V AV DG A +V RP DL+LT+V +P +
Sbjct: 633 VRILLADDNADMREYVARLL-SPRWTVEAVADGAAALDVALARPP--DLVLTDVMMPRLD 689
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
GF LL + + IPVIM+S++ + M GA DYLVKP EL
Sbjct: 690 GFGLLRALRSQASTRAIPVIMLSARAGEEARVEGMEAGADDYLVKPFSAREL 741
>gi|332664021|ref|YP_004446809.1| guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
gi|332332835|gb|AEE49936.1| adenylate/guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
Length = 1609
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+ +L+V+ + +Q++ L K+ YR+T V G +A +VL IDL+L +V +P +S
Sbjct: 1198 VHILIVDDEVVNQQVLKNFLNKAIYRITQVLSGEEALQVLD-DDDTIDLVLLDVMMPRMS 1256
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
G+ + + E + +PV+M+++++ VS + + GA DY+ KP ++E
Sbjct: 1257 GYEVCQKIREKHLPSELPVLMITAKNQVSDLVTGLNTGANDYIAKPFSKDEF 1308
>gi|149921398|ref|ZP_01909851.1| sigma-54 dependent DNA-binding response regulator [Plesiocystis
pacifica SIR-1]
gi|149817718|gb|EDM77183.1| sigma-54 dependent DNA-binding response regulator [Plesiocystis
pacifica SIR-1]
Length = 477
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI--DLILTEVDLPSI 90
R+L+V+ + S R +T LLR ++ V + DG KA GR N D+++T++ +P +
Sbjct: 11 RILVVDDESSARSALTELLRDENFEVQSAGDGFKAL----GRLDNFTPDVVITDLKMPGM 66
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+G AL+ V E +PV++M++ +V + + + +GA DYL KP+ +L + + V
Sbjct: 67 NGIALMEKVRER--LPEVPVVVMTAFGTVESAVEAIQQGADDYLTKPLHLGQLLVVVERV 124
Query: 151 WRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGY 189
++ +DE + + E+ D S +
Sbjct: 125 LGHRALKDEAKRLRDELARRDEGESEEGFDGMVGRSRAF 163
>gi|307944487|ref|ZP_07659827.1| acetoacetate metabolism regulatory protein AtoC [Roseibium sp.
TrichSKD4]
gi|307772236|gb|EFO31457.1| acetoacetate metabolism regulatory protein AtoC [Roseibium sp.
TrichSKD4]
Length = 558
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 11 LKEMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEV 70
L + N + ET +Q R+L+V+ D R+++ ++K+ Y+ +G++A E+
Sbjct: 15 LDRIETNHPDPRQETPMQASGGRILIVDDDPIQRRLLEEAVKKAGYKSRTAENGVQAIEI 74
Query: 71 LKGRPRN-IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRG 129
+ G N IDLI+ ++ +P + G +LT + +I PVI+ ++Q + V M G
Sbjct: 75 MMGPDGNDIDLIVLDMVMPELDGLGVLTKLRSEKIAT--PVIVQTAQGGIDVVVNAMNAG 132
Query: 130 AADYLVKPVRRNEL----RNLWQ 148
A D+ VKPV L RNL +
Sbjct: 133 AQDFAVKPVSLERLNVSIRNLLK 155
>gi|7770351|gb|AAF69721.1|AC016041_26 F27J15.4 [Arabidopsis thaliana]
Length = 612
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + +T + ++++ +Y+V+ D KA L I++++ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
L + ++PV++MS + +V K GA DY+VKPV+ + N+WQH+ R+
Sbjct: 96 QALKSITSK---LDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
Query: 154 Q 154
+
Sbjct: 153 R 153
>gi|298529768|ref|ZP_07017171.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511204|gb|EFI35107.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 502
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ ++S R+I L+ Y V DG++A E + R ++IDLI++++ +P + G
Sbjct: 12 VLVVDDEESLREICQDALKDEGYEVLQAEDGVQAKEQI-ARHQDIDLIISDLRMPRLGGL 70
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
LL EH + +I ++M+ S+ T +C+ GAADYL KP
Sbjct: 71 ELLQYTAEHNL--DIDFLVMTGFASIETAVECIKTGAADYLPKP 112
>gi|60893116|gb|AAX37306.1| CheY [Desulfovibrio gigas]
Length = 123
Score = 68.9 bits (167), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+V+ + R +V +L+K Y+VTA +GL E L +DLI++++++P + GF
Sbjct: 6 ILIVDDSKTVRNLVAFILKKEGYKVTAAENGLDGLEKLYSM-EQVDLIISDINMPKMDGF 64
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE-LRNL 146
+ V E + +++P++++S++ + + + GA Y+VKP + + LRN+
Sbjct: 65 TFIRHVREQVLYRDLPIVVLSTEGQEKDIQQGLQLGANLYMVKPAQPEKLLRNV 118
>gi|254239958|ref|ZP_04933280.1| hypothetical protein PA2G_00591 [Pseudomonas aeruginosa 2192]
gi|126193336|gb|EAZ57399.1| hypothetical protein PA2G_00591 [Pseudomonas aeruginosa 2192]
Length = 651
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLVE + + ++ A+LR YRVT V DG++A V + D IL + LP + G+
Sbjct: 517 ILLVEDNPVNQTVIEAMLRSLGYRVTLVADGIQA--VRSAERQRYDAILMDCRLPVLDGY 574
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+ + E + +P+I +++ C+ G DYL KP +R EL+ + Q
Sbjct: 575 SATREIRAQENGRQVPIIALTANALQGDRENCLQAGMNDYLAKPFKRAELQRILQRWIGS 634
Query: 154 QSSM-VSGNET 163
Q + V+ NET
Sbjct: 635 QPELPVTSNET 645
>gi|15222067|ref|NP_175345.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194281|gb|AEE32402.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 608
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + +T + ++++ +Y+V+ D KA L I++++ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
L + ++PV++MS + +V K GA DY+VKPV+ + N+WQH+ R+
Sbjct: 96 QALKSITSK---LDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
Query: 154 Q 154
+
Sbjct: 153 R 153
>gi|356554487|ref|XP_003545577.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 379
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
+ L V+ ++ D ++ L+ K Y VT +K +L+ DL++++V++P
Sbjct: 78 VGLCVVAIDDDQMCLTVLENLIHKCHYNVTTTNQAIKVLXMLRKNINKFDLLISDVNIPD 137
Query: 90 ISGFALLTLVMEHEICKNIPVIM-MSSQDSVSTVYKC-MMRGAADYLVKPVRRNELRNLW 147
+ GF LL LV + ++P I + SV T + +++GA +YL KP+R EL+N+W
Sbjct: 138 MDGFKLLELV---GLQMDLPFITKIKHLYSVFTFIQLDVIQGACEYLTKPIRIEELQNIW 194
Query: 148 QHVWRRQSSMVSGNET 163
+HV R + N+T
Sbjct: 195 KHVLRMRIDSKDKNKT 210
>gi|334183176|ref|NP_001185179.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194282|gb|AEE32403.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 622
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + +T + ++++ +Y+V+ D KA L I++++ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
L + ++PV++MS + +V K GA DY+VKPV+ + N+WQH+ R+
Sbjct: 96 QALKSITSK---LDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
Query: 154 Q 154
+
Sbjct: 153 R 153
>gi|167923848|ref|ZP_02510939.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei BCC215]
Length = 601
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 475 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDA--FDLVVTDID 532
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 533 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 582
>gi|107101043|ref|ZP_01364961.1| hypothetical protein PaerPA_01002073 [Pseudomonas aeruginosa PACS2]
gi|254234711|ref|ZP_04928034.1| hypothetical protein PACG_00580 [Pseudomonas aeruginosa C3719]
gi|126166642|gb|EAZ52153.1| hypothetical protein PACG_00580 [Pseudomonas aeruginosa C3719]
Length = 651
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLVE + + ++ A+LR YRVT V DG++A V + D IL + LP + G+
Sbjct: 517 ILLVEDNPVNQTVIEAMLRSLGYRVTLVADGIQA--VRSAERQRYDAILMDCRLPVLDGY 574
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+ + E + +P+I +++ C+ G DYL KP +R EL+ + Q
Sbjct: 575 SATREIRAQENGRQVPIIALTANALQGDRENCLQAGMNDYLAKPFKRAELQRILQRWIGS 634
Query: 154 QSSM-VSGNET 163
Q + V+ NET
Sbjct: 635 QPELPVTSNET 645
>gi|218892432|ref|YP_002441299.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
LESB58]
gi|386059499|ref|YP_005976021.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
M18]
gi|392984925|ref|YP_006483512.1| sensor/response regulator hybrid [Pseudomonas aeruginosa DK2]
gi|416854091|ref|ZP_11910666.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
138244]
gi|419755526|ref|ZP_14281881.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
PADK2_CF510]
gi|420140534|ref|ZP_14648289.1| sensor/response regulator hybrid [Pseudomonas aeruginosa CIG1]
gi|421154704|ref|ZP_15614206.1| sensor/response regulator hybrid [Pseudomonas aeruginosa ATCC
14886]
gi|421161608|ref|ZP_15620546.1| sensor/response regulator hybrid [Pseudomonas aeruginosa ATCC
25324]
gi|421181297|ref|ZP_15638811.1| sensor/response regulator hybrid [Pseudomonas aeruginosa E2]
gi|424940830|ref|ZP_18356593.1| probable sensor/response regulator hybrid [Pseudomonas aeruginosa
NCMG1179]
gi|451984365|ref|ZP_21932619.1| Sensor histidine kinase/response regulator [Pseudomonas aeruginosa
18A]
gi|218772658|emb|CAW28443.1| probable sensor/response regulator hybrid [Pseudomonas aeruginosa
LESB58]
gi|334844493|gb|EGM23067.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
138244]
gi|346057276|dbj|GAA17159.1| probable sensor/response regulator hybrid [Pseudomonas aeruginosa
NCMG1179]
gi|347305805|gb|AEO75919.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
M18]
gi|384398223|gb|EIE44631.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
PADK2_CF510]
gi|392320430|gb|AFM65810.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
DK2]
gi|403246700|gb|EJY60401.1| sensor/response regulator hybrid [Pseudomonas aeruginosa CIG1]
gi|404521612|gb|EKA32183.1| sensor/response regulator hybrid [Pseudomonas aeruginosa ATCC
14886]
gi|404539334|gb|EKA48820.1| sensor/response regulator hybrid [Pseudomonas aeruginosa ATCC
25324]
gi|404544094|gb|EKA53302.1| sensor/response regulator hybrid [Pseudomonas aeruginosa E2]
gi|451757982|emb|CCQ85142.1| Sensor histidine kinase/response regulator [Pseudomonas aeruginosa
18A]
gi|453046967|gb|EME94682.1| sensor/response regulator hybrid [Pseudomonas aeruginosa
PA21_ST175]
Length = 651
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLVE + + ++ A+LR YRVT V DG++A V + D IL + LP + G+
Sbjct: 517 ILLVEDNPVNQTVIEAMLRSLGYRVTLVADGIQA--VRSAERQRYDAILMDCRLPVLDGY 574
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+ + E + +P+I +++ C+ G DYL KP +R EL+ + Q
Sbjct: 575 SATREIRAQENGRQVPIIALTANALQGDRENCLQAGMNDYLAKPFKRAELQRILQRWIGS 634
Query: 154 QSSM-VSGNET 163
Q + V+ NET
Sbjct: 635 QPELPVTSNET 645
>gi|444918548|ref|ZP_21238617.1| GAF sensor signal transduction histidine kinase [Cystobacter fuscus
DSM 2262]
gi|444709727|gb|ELW50727.1| GAF sensor signal transduction histidine kinase [Cystobacter fuscus
DSM 2262]
Length = 981
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
RVL+V+ + R VT LL ++ V AV DG +A +++ P D+IL++V +P + G
Sbjct: 618 RVLVVDDNADMRAYVTGLL-HPTFEVVAVGDGARALALMRAHPP--DIILSDVMMPRLGG 674
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
F LL V E K +P I++S++ + + GA DYLVKP EL
Sbjct: 675 FGLLREVRATESLKTVPFILLSARAGEEASVEGLEAGADDYLVKPFSAREL 725
>gi|167820901|ref|ZP_02452581.1| chemotaxis-related histidine kinase protein [Burkholderia
pseudomallei 91]
Length = 598
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 472 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGD--VFDLVVTDID 529
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 530 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 579
>gi|427738777|ref|YP_007058321.1| EAL domain-containing protein [Rivularia sp. PCC 7116]
gi|427373818|gb|AFY57774.1| EAL domain-containing protein [Rivularia sp. PCC 7116]
Length = 403
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEV-LKGRPRNIDLILTEVDLPSIS 91
++L++E +++ R+ + LL + V + P+G ++ LKG P DLIL ++ +P I+
Sbjct: 3 KILVIEDEEAVRENILDLLEAEDFEVISAPNGRVGVDLALKGSP---DLILCDLMMPEIN 59
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
GFA+L L+ E +P I ++++ + + + M GA DYL KP R EL +
Sbjct: 60 GFAVLALLREKFNTSAVPFIFLTARSAKADFRQGMELGADDYLTKPFTRAELLSAISTRL 119
Query: 152 RRQSSMV 158
+RQ++++
Sbjct: 120 QRQAAII 126
>gi|15596808|ref|NP_250302.1| sensor/response regulator hybrid [Pseudomonas aeruginosa PAO1]
gi|418587014|ref|ZP_13151050.1| sensor/response regulator hybrid [Pseudomonas aeruginosa MPAO1/P1]
gi|418592525|ref|ZP_13156395.1| sensor/response regulator hybrid [Pseudomonas aeruginosa MPAO1/P2]
gi|421516246|ref|ZP_15962932.1| sensor/response regulator hybrid [Pseudomonas aeruginosa PAO579]
gi|9947577|gb|AAG05000.1|AE004589_3 probable sensor/response regulator hybrid [Pseudomonas aeruginosa
PAO1]
gi|375042361|gb|EHS35015.1| sensor/response regulator hybrid [Pseudomonas aeruginosa MPAO1/P1]
gi|375048700|gb|EHS41217.1| sensor/response regulator hybrid [Pseudomonas aeruginosa MPAO1/P2]
gi|404349974|gb|EJZ76311.1| sensor/response regulator hybrid [Pseudomonas aeruginosa PAO579]
Length = 651
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLVE + + ++ A+LR YRVT V DG++A V + D IL + LP + G+
Sbjct: 517 ILLVEDNPVNQTVIEAMLRSLGYRVTLVADGIQA--VRSAERQRYDAILMDCRLPVLDGY 574
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+ + E + +P+I +++ C+ G DYL KP +R EL+ + Q
Sbjct: 575 SATREIRAQENGRRVPIIALTANALQGDRENCLQAGMNDYLAKPFKRAELQRILQRWIGS 634
Query: 154 QSSM-VSGNET 163
Q + V+ NET
Sbjct: 635 QPELPVTSNET 645
>gi|296390015|ref|ZP_06879490.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
PAb1]
gi|355644508|ref|ZP_09053820.1| hypothetical protein HMPREF1030_02906 [Pseudomonas sp. 2_1_26]
gi|416875746|ref|ZP_11918867.1| sensor/response regulator hybrid [Pseudomonas aeruginosa 152504]
gi|334841678|gb|EGM20302.1| sensor/response regulator hybrid [Pseudomonas aeruginosa 152504]
gi|354829189|gb|EHF13272.1| hypothetical protein HMPREF1030_02906 [Pseudomonas sp. 2_1_26]
Length = 651
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLVE + + ++ A+LR YRVT V DG++A V + D IL + LP + G+
Sbjct: 517 ILLVEDNPVNQTVIEAMLRSLGYRVTLVADGIQA--VRSAERQRYDAILMDCRLPVLDGY 574
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+ + E + +P+I +++ C+ G DYL KP +R EL+ + Q
Sbjct: 575 SATREIRAQENGRRVPIIALTANALQGDRENCLQAGMNDYLAKPFKRAELQRILQRWIGS 634
Query: 154 QSSM-VSGNET 163
Q + V+ NET
Sbjct: 635 QPELPVTSNET 645
>gi|188587839|ref|YP_001922138.1| response regulator [Clostridium botulinum E3 str. Alaska E43]
gi|188498120|gb|ACD51256.1| response regulator [Clostridium botulinum E3 str. Alaska E43]
Length = 218
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M + VL++E D++ ++ L Y+ + DGL+A+ +LK P DLIL ++ LP
Sbjct: 1 MKINVLIIEDDEAISNLIKINLSMVGYQSKQLFDGLEAFNLLKEEP--FDLILMDIMLPG 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF L+ + + NIPVI +++++ ++ + GA DY+VKP EL +
Sbjct: 59 MDGFELMKKIKDL----NIPVIFLTAKNGLADKVTGLKSGAEDYIVKPFETVELLARIEI 114
Query: 150 VWRRQSS 156
V RR S
Sbjct: 115 VLRRYSK 121
>gi|223935716|ref|ZP_03627632.1| CheA signal transduction histidine kinase [bacterium Ellin514]
gi|223895724|gb|EEF62169.1| CheA signal transduction histidine kinase [bacterium Ellin514]
Length = 1084
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+V+ S R+++ L+ + V DGL A E L+ P + L+LT++++P + GF
Sbjct: 964 ILVVDDSLSVRKVIEKHLKALHFNVELAIDGLDALEKLRNVP--VSLVLTDLEMPRMHGF 1021
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
L+ + HE +PVI+++S+D+ GA DY++KP R +L H
Sbjct: 1022 ELIAEIRRHESFHAVPVIVVTSRDAEKHRLHAASLGANDYIIKPFSREQLAERIDH 1077
>gi|386065441|ref|YP_005980745.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
NCGM2.S1]
gi|348034000|dbj|BAK89360.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
NCGM2.S1]
Length = 651
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLVE + + ++ A+LR YRVT V DG++A V + D IL + LP + G+
Sbjct: 517 ILLVEDNPVNQTVIEAMLRSLGYRVTLVADGIQA--VRSAERQRYDAILMDCRLPVLDGY 574
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+ + E + +P+I +++ C+ G DYL KP +R EL+ + Q
Sbjct: 575 SATREIRAQENGRRVPIIALTANALQGDRENCLQAGMNDYLAKPFKRAELQRILQRWIGS 634
Query: 154 QSSM-VSGNET 163
Q + V+ NET
Sbjct: 635 QPELPVTSNET 645
>gi|167724763|ref|ZP_02407999.1| chemotaxis histidine kinase/response regulator [Burkholderia
pseudomallei DM98]
Length = 530
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 404 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGDA--FDLVVTDID 461
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 462 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 511
>gi|300866045|ref|ZP_07110777.1| adenylate/guanylate cyclase [Oscillatoria sp. PCC 6506]
gi|300335960|emb|CBN55935.1| adenylate/guanylate cyclase [Oscillatoria sp. PCC 6506]
Length = 352
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ ++ R ++ L++ ++V DG+ A E+++ P DL+L ++ +P ++G+
Sbjct: 8 VLVVDDNEVNRDLLARRLQRQGHKVQVAEDGILALEMMRSHP--FDLVLLDIMMPQMNGY 65
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
+L + + + IPVIM+S+ D + ++ +C+ GA DYL KP
Sbjct: 66 QVLEHLKADDKLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKP 109
>gi|313106625|ref|ZP_07792850.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
39016]
gi|310879352|gb|EFQ37946.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
39016]
Length = 651
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLVE + + ++ A+LR YRVT V DG++A V + D IL + LP + G+
Sbjct: 517 ILLVEDNPVNQTVIEAMLRSLGYRVTLVADGIQA--VRSAERQRYDAILMDCRLPVLDGY 574
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+ + E + +P+I +++ C+ G DYL KP +R EL+ + Q
Sbjct: 575 SATREIRAQENGRRVPIIALTANALQGDRENCLQAGMNDYLAKPFKRAELQRILQRWIGS 634
Query: 154 QSSM-VSGNET 163
Q + V+ NET
Sbjct: 635 QPELPVTSNET 645
>gi|297819426|ref|XP_002877596.1| hypothetical protein ARALYDRAFT_906046 [Arabidopsis lyrata subsp.
lyrata]
gi|297323434|gb|EFH53855.1| hypothetical protein ARALYDRAFT_906046 [Arabidopsis lyrata subsp.
lyrata]
Length = 183
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN---------IDLIL 82
L VL V+ R+ + LLR SS +VT V +A + L N I+LI+
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENSSVGFEDLKINLIM 84
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + IPV++MSS++ + + +C+ GA D+L+KPV+ +
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLAD 144
Query: 143 LRNLWQHVWR 152
++ L + +
Sbjct: 145 VKRLRDSLMK 154
>gi|256378007|ref|YP_003101667.1| multi-sensor signal transduction histidine kinase [Actinosynnema
mirum DSM 43827]
gi|255922310|gb|ACU37821.1| multi-sensor signal transduction histidine kinase [Actinosynnema
mirum DSM 43827]
Length = 1370
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 31 ALRVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLP 88
AL +V ADD+ R+ +T LLR + YRV AV DG A E + R R DL++T+V +P
Sbjct: 605 ALPARVVVADDNADMREYLTRLLRSAGYRVRAVADGRAALEEV--RARTPDLVVTDVMMP 662
Query: 89 SISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP---------VR 139
+ G L+ + + +PV+++S++ + + GA DYLVKP VR
Sbjct: 663 RLDGLGLVAALRADQRTAGVPVVLLSARAGQEASIEGLAAGADDYLVKPFAAADLLARVR 722
Query: 140 RN-ELRNLWQHVWRRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGY 189
N EL L H R +++++ + Q+ + A E +AA GY
Sbjct: 723 ANVELARLRDHHARWRAALL--DSLQEAFFVCDETGAVVEINAAFTTVLGY 771
>gi|427401606|ref|ZP_18892678.1| hypothetical protein HMPREF9710_02274 [Massilia timonae CCUG 45783]
gi|425719715|gb|EKU82647.1| hypothetical protein HMPREF9710_02274 [Massilia timonae CCUG 45783]
Length = 132
Score = 68.6 bits (166), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 60/109 (55%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+VE DD Q++ +L + YRV + DG A E + P DL+L +V LP + GF
Sbjct: 11 VLVVEDDDHIAQVLRFMLERQGYRVLHLADGRAASEYVAASPEIPDLVLMDVMLPHLDGF 70
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
++ L +P++M++++++ + + GA D++ KP + NE
Sbjct: 71 EIVALARARAEWAAVPILMLTAKNTERDTVRALDAGANDFVSKPFQPNE 119
>gi|359828770|gb|AEV76987.1| type A response regulator 1, partial [Triticum aestivum]
Length = 209
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Query: 33 RVLLVEADDSTRQIVTALL----RKSSYRVTAVPDGLKAWEVL---KGRPRNIDLILTEV 85
RVLLV+ R++V +L S+ V AV KA E L G+ + +D++LT+
Sbjct: 4 RVLLVDDSPVDRKVVELVLGSNTFAGSFHVVAVDSAKKAMEFLGLKDGKEQAVDMVLTDY 63
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
+P ++G+ LL + K IPVI+MSS++ + +C+ GA DY+VKP++ ++
Sbjct: 64 CMPEMTGYDLLKAIKAMSPLKPIPVIVMSSENEPQRISRCLKAGAEDYIVKPLQSKDVPR 123
Query: 146 L 146
L
Sbjct: 124 L 124
>gi|242074746|ref|XP_002447309.1| hypothetical protein SORBIDRAFT_06g032600 [Sorghum bicolor]
gi|241938492|gb|EES11637.1| hypothetical protein SORBIDRAFT_06g032600 [Sorghum bicolor]
Length = 170
Score = 68.6 bits (166), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-NIDLILTEVDLPSISG 92
VL V+ R ++ +LR S YRVT V +A E+L ++++I+T+ +P ++G
Sbjct: 52 VLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLALGLLPDVNMIITDYWMPGMTG 111
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
+ LL V E + IPV++MSS++ + + +C+ GA D+L+KPVR +++ L
Sbjct: 112 YELLKHVKESSELREIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDVSRL 165
>gi|167743710|ref|ZP_02416484.1| chemotaxis-related histidine kinase protein [Burkholderia
pseudomallei 14]
Length = 588
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 27 LQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVD 86
L R A RVL+V+ + R++ LL K Y VT DG+ W ++G DL++T++D
Sbjct: 462 LARRAKRVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGD--VFDLVVTDID 519
Query: 87 LPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
+P + G L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 520 MPRMDGIELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 569
>gi|120434874|ref|YP_860560.1| two-component response transcriptional regulator [Gramella forsetii
KT0803]
gi|117577024|emb|CAL65493.1| two-component system response regulator containing sigma-54
interaction domain [Gramella forsetii KT0803]
Length = 388
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 6/128 (4%)
Query: 33 RVLLVEADDSTRQIVTALLRKSS--YRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
++LL+E + S R+++ +L + S Y VT DGL+ E++K + DLIL ++ +P +
Sbjct: 3 KILLIEDEASIRRVLNKILTEESKNYEVTDAEDGLQGMELVKNE--DFDLILCDIKMPKM 60
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
G +L V +I IPV+M+S + T M GA DY+ KP N L N ++
Sbjct: 61 DGVEVLEAV--KKIKPEIPVVMISGHGDLDTAVNTMKIGAFDYISKPPDLNRLLNTVRNA 118
Query: 151 WRRQSSMV 158
R+ +V
Sbjct: 119 LDRKELVV 126
>gi|389721425|ref|ZP_10188177.1| chemotaxis protein histidine kinase [Acinetobacter sp. HA]
gi|388608721|gb|EIM37917.1| chemotaxis protein histidine kinase [Acinetobacter sp. HA]
Length = 1499
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKG-RPRNIDLILTEVDLPS 89
R L++ DDS R++ + LL + Y + DG+ A E L+ RP DL+L ++++P
Sbjct: 1376 RRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRP---DLMLLDIEMPR 1432
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ GF ++ LV H+I +N+P+IM++S+ + G Y+ KP + EL
Sbjct: 1433 MDGFEVINLVRHHDIHRNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAEL 1486
>gi|392379365|ref|YP_004986524.1| putative sensor histidine kinase with multiple PAS and a response
regulator receiver domain (modular protein)
[Azospirillum brasilense Sp245]
gi|356881732|emb|CCD02725.1| putative sensor histidine kinase with multiple PAS and a response
regulator receiver domain (modular protein)
[Azospirillum brasilense Sp245]
Length = 1232
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKG-RPRNIDLILTEVDLPSIS 91
R+LL + + R V+ LL Y V AVPDG A ++ RP DL+LT++ +P +
Sbjct: 635 RLLLADDNADMRDYVSRLL-NGRYAVEAVPDGQAALAAMRANRP---DLVLTDIMMPVLD 690
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
GF LL + E +++PVI++S++ + + GA DYLVKP EL
Sbjct: 691 GFGLLRAIREDADLRDLPVILLSARAGEEASVEGLSAGADDYLVKPFSAREL 742
>gi|343514456|ref|ZP_08751527.1| transcriptional regulatory protein CpxR [Vibrio sp. N418]
gi|342799993|gb|EGU35542.1| transcriptional regulatory protein CpxR [Vibrio sp. N418]
Length = 252
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLVE D + +TALL+ + Y VT + G +A +LK R DLIL +V++P++ GF
Sbjct: 26 ILLVEDDRNLNHQLTALLQANGYTVTNLECGAQALTLLK--MRQFDLILLDVNVPNVDGF 83
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
LL V H PVIM+++ + K + GA DY+ KP E++ + V RR
Sbjct: 84 GLLKYVRSHS---RTPVIMLTAYGAEEHRIKGLRNGADDYISKPCNFEEVKLRIEAVLRR 140
Query: 154 QSSMVS 159
+ +
Sbjct: 141 TQQLAA 146
>gi|167566639|ref|ZP_02359555.1| chemotaxis sensor histidine kinase, putative [Burkholderia
oklahomensis EO147]
Length = 769
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
RVL+V+ + R++ LL K Y VT DG+ W ++G + DL++T++D+P + G
Sbjct: 649 RVLVVDDSLTVRELERKLLEKRGYDVTIAIDGMDGWNAIRGD--SFDLVVTDIDMPRMDG 706
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
L+TL+ + K++PV+++S +D + + GA YL K
Sbjct: 707 IELVTLIKGDPLLKSVPVMIVSYKDRDEDRRRGLEAGADYYLAK 750
>gi|3323581|gb|AAC26635.1| two-component response regulator homolog [Arabidopsis thaliana]
Length = 184
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN----------IDLI 81
L VL V+ R+ + LLR SS +VT V +A + L N I+LI
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLI 84
Query: 82 LTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
+T+ +P ++G+ LL + E + IPV++MSS++ + + +C+ GA D+L+KPV+
Sbjct: 85 MTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLA 144
Query: 142 ELRNLWQHVWR 152
+++ L + +
Sbjct: 145 DVKRLRDSLMK 155
>gi|309951240|emb|CBX43990.1| putative A-type response regulator 8 [Populus x canadensis]
Length = 154
Score = 68.6 bits (166), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 72/123 (58%), Gaps = 10/123 (8%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL----------KGRPRNIDLILT 83
VL V+ R++V LL+ SS +VT +GL+A E L + ++LI+T
Sbjct: 23 VLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYLGLGDEKRTSLEDNVSKVNLIIT 82
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + E + K IPV++MSS++ + + KC+ GA +++KP++++++
Sbjct: 83 DYCMPGMTGYELLKKIKESSMLKKIPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSDV 142
Query: 144 RNL 146
L
Sbjct: 143 VKL 145
>gi|302875761|ref|YP_003844394.1| two component transcriptional regulator, winged helix family
[Clostridium cellulovorans 743B]
gi|307689195|ref|ZP_07631641.1| two component transcriptional regulator, winged helix family
protein [Clostridium cellulovorans 743B]
gi|302578618|gb|ADL52630.1| two component transcriptional regulator, winged helix family
[Clostridium cellulovorans 743B]
Length = 224
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 66/110 (60%), Gaps = 4/110 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+VE D R + +L K+ Y+ + DG KA E+L+ +DL+++++ +P++ GF
Sbjct: 4 VLVVEDDKDLRGLFCTILTKNGYKAISAEDGEKALEILE--KEYVDLVISDIMMPNMDGF 61
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
L + E N+P++M++++++ + K + G DY+VKPV NE+
Sbjct: 62 ELTKALREANF--NLPILMITAKETFADKQKGFLVGTDDYMVKPVDVNEM 109
>gi|383754298|ref|YP_005433201.1| putative response regulator receiver protein [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366350|dbj|BAL83178.1| putative response regulator receiver protein [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 346
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 93/179 (51%), Gaps = 20/179 (11%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
+F++R R++ V+ DD R + A+L Y TAV G +A ++L G+P +DLIL +
Sbjct: 5 SFIKR---RIMAVDDDDINRMTLEAIL-SVDYDFTAVSSGPEALDLLAGQP--VDLILLD 58
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV------ 138
+++P ++GF +L + + E +IPVIM++ T + + GA D++ KP
Sbjct: 59 INMPEMNGFEVLAALQQGEKTCSIPVIMLTGDLDQETEVQGIQAGAFDFVHKPFIPTLIL 118
Query: 139 ----RRNELRNLWQHVWR---RQSSMVSGNETQDESVGQQKIEATSEN-DAASNHSSGY 189
R EL+ L H+ + RQ+++ + + + +E ++ DA ++ G+
Sbjct: 119 RRIERTLELKALQHHMQQEIDRQTAIAKEQLASTQRLFHEMVETLADTIDAKDKYTHGH 177
>gi|258513413|ref|YP_003189635.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfotomaculum acetoxidans DSM 771]
gi|257777118|gb|ACV61012.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfotomaculum acetoxidans DSM 771]
Length = 486
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 3/189 (1%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+ +LLVE D +R + LRK +R+ DG A K +L+++++ +P IS
Sbjct: 1 MNILLVEDDLDSRLYLGQFLRKLGHRIVESEDGEDALS--KFPTGQFNLVISDIRMPKIS 58
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
G LL ++ ++ +I+ + VS + + GA DYL+KP+ NEL + Q V
Sbjct: 59 GLELLQTIVHLPAGRDTDIILFTGHVDVSLAIEALRAGAYDYLLKPINVNELTAVIQRVS 118
Query: 152 RRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSSCT 211
RQ S++ N+ + ++K + + + Y+ I+ + FI +Q
Sbjct: 119 ERQ-SLLRENKIANNKFKKEKAASQATQRELELLKTSYVREIKREEVFIFSKKMKQIYTQ 177
Query: 212 KPDFEAESA 220
+F+ +++
Sbjct: 178 AENFQLDTS 186
>gi|339010238|ref|ZP_08642808.1| Two-component response regulator [Brevibacillus laterosporus LMG
15441]
gi|338772393|gb|EGP31926.1| Two-component response regulator [Brevibacillus laterosporus LMG
15441]
Length = 218
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M ++L+VE D +I+ L ++ T V DGL A E +K DLIL +V +P
Sbjct: 1 MQKKILIVEDDIHIAKIIKMNLTLVNFLTTEVHDGLSALEAVK--REKFDLILLDVMIPK 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF+L ME +IPVI +S+++SV + GA DY+VKP EL +
Sbjct: 59 LDGFSL----MEKMKSYHIPVIFLSAKNSVYDKVNGLKLGADDYIVKPFEAIELLARIET 114
Query: 150 VWRRQSSMVSGNETQDESVGQQKIEATSE 178
V RR S + Q+ V K EAT +
Sbjct: 115 VLRRYGKEDSIIKFQNIEVALDKREATIQ 143
>gi|428217823|ref|YP_007102288.1| response regulator receiver protein [Pseudanabaena sp. PCC 7367]
gi|427989605|gb|AFY69860.1| response regulator receiver protein [Pseudanabaena sp. PCC 7367]
Length = 243
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + R + LR+ ++T DG +A ++L + DLIL ++ +P + G+
Sbjct: 8 VLIVDDSEMNRDTLARRLRQQGCKITMAADGKEALKILSKQ--LFDLILLDIMMPEVDGY 65
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
+L V E +++PVIM+S+ + + +V +CM GA DYL KP
Sbjct: 66 TVLGKVKASETLQHMPVIMISALEELDSVMRCMEMGAEDYLTKP 109
>gi|302923768|ref|XP_003053746.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734687|gb|EEU48033.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1371
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 28 QRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI----DLILT 83
+R + +L+VE + ++I T + + ++VTA +G +A E L G + I D+IL
Sbjct: 1100 ERAKIHILVVEDNPINQKIATKTIGRLGFQVTAAWNGKEALEYLSGVHQGIKPKPDIILM 1159
Query: 84 EVDLPSISGFALLTLVMEH----EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+V +P I G+ L+ H I +++P++ M++ KC G DYL KPVR
Sbjct: 1160 DVQMPIIDGYKCTHLLRHHLPYKPIVQDVPIVAMTASAIQGDREKCTRAGMDDYLAKPVR 1219
Query: 140 RNELRNL---WQHVWRRQSS 156
L + W H RR S+
Sbjct: 1220 SVILEKMLLRWCHARRRAST 1239
>gi|3953599|dbj|BAA34727.1| response regulator 5 [Arabidopsis thaliana]
Length = 184
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN----------IDLI 81
L VL V+ R+ + LLR SS +VT V +A + L N I+LI
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLI 84
Query: 82 LTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
+T+ +P ++G+ LL + E + IPV++MSS++ + + +C+ GA D+L+KPV+
Sbjct: 85 MTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLA 144
Query: 142 ELRNLWQHVWR 152
+++ L + +
Sbjct: 145 DVKRLRDSLMK 155
>gi|218194631|gb|EEC77058.1| hypothetical protein OsI_15444 [Oryza sativa Indica Group]
Length = 390
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 71/123 (57%), Gaps = 9/123 (7%)
Query: 32 LRVLLVEAD----DSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDL 87
L ++++ D DST +++A L ++ VT +KA + L+ +DL+L +V +
Sbjct: 12 LSAMVIDEDKCHADSTSYMLSAEL---NFSVTVFTSPIKALDFLQNHAEGVDLVLADVHM 68
Query: 88 PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLW 147
++GF L + E+ K+I VIMMS++ ++ T+ +C+ GA + KP+ ++NLW
Sbjct: 69 EEMNGFDFLKVA--RELHKSIQVIMMSTETTMYTMKRCVKLGAQFLVNKPLDAGTIKNLW 126
Query: 148 QHV 150
Q+V
Sbjct: 127 QYV 129
>gi|114778037|ref|ZP_01452937.1| type IV pilus biogenesis protein PilB [Mariprofundus ferrooxydans
PV-1]
gi|114551643|gb|EAU54196.1| type IV pilus biogenesis protein PilB [Mariprofundus ferrooxydans
PV-1]
Length = 732
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL-KGRPRNIDLILTEVDLPSISG 92
VL+V+ S R +V +L Y+V DG +AW++L + +P L+LT+ ++P+++G
Sbjct: 604 VLVVDDSSSVRNLVEFVLDADGYKVLQAEDGQQAWDMLQRMKP---SLVLTDCEMPNMTG 660
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV-------RRNELRN 145
LL + E + ++PVI+++++ S + + GAADY+ KPV R + +
Sbjct: 661 MELLKQMREQDRFDDVPVILLTARRSEEDEVQGLKAGAADYIGKPVEPLKLQARVRKTLS 720
Query: 146 LWQHVWRR 153
L++H++ R
Sbjct: 721 LYEHIYHR 728
>gi|116788845|gb|ABK25022.1| unknown [Picea sitchensis]
Length = 208
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 78/146 (53%), Gaps = 17/146 (11%)
Query: 15 NGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL--- 71
NGNE + E + +A+ L+E R+++ LL+ + ++VT V +A EVL
Sbjct: 23 NGNEPVQCDE--MHVLAVDDCLIE-----RKVIEKLLKTNFFKVTTVDSAERALEVLGFH 75
Query: 72 -------KGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYK 124
+++I+T+ +P ++G+ LL V E + K IPV+++SS++ +
Sbjct: 76 EEQSTCAASNAFKVNMIITDYCMPGMTGYDLLKKVQETKCLKEIPVVIISSENVPQRITS 135
Query: 125 CMMRGAADYLVKPVRRNELRNLWQHV 150
C+ GA D+++KP++ ++ L H+
Sbjct: 136 CLAGGAKDFIIKPLKLADVTKLKGHI 161
>gi|264680118|ref|YP_003280027.1| chemotaxis protein CheA [Comamonas testosteroni CNB-2]
gi|262210633|gb|ACY34731.1| CheA signal transduction histidine kinase [Comamonas testosteroni
CNB-2]
Length = 2199
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 8/119 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKG-RPRNIDLILTEVDLPSISG 92
VL+V+ + R++ LL++ YRVT DGL+A E L+ RP L+L+++++P + G
Sbjct: 2058 VLVVDDSITVRRVTQRLLQREGYRVTLAADGLQAMERLQDERP---TLVLSDIEMPRMDG 2114
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMR--GAADYLVKPVRRNELRNLWQH 149
F LL + + + +PV+M++S+ ++ ++ M R GA YL KP EL L QH
Sbjct: 2115 FDLLRNIRADQTLEGMPVVMITSR--IAQKHREMARDLGANHYLGKPYSDEELLGLIQH 2171
>gi|15228338|ref|NP_190393.1| two-component response regulator ARR5 [Arabidopsis thaliana]
gi|51316111|sp|Q9SB04.2|ARR5_ARATH RecName: Full=Two-component response regulator ARR5; AltName:
Full=Response reactor 2
gi|3273198|dbj|BAA31144.1| responce reactor2 [Arabidopsis thaliana]
gi|4678318|emb|CAB41129.1| responce reactor2 [Arabidopsis thaliana]
gi|18252911|gb|AAL62382.1| response reactor 2 (ATRR2) [Arabidopsis thaliana]
gi|21389637|gb|AAM48017.1| response reactor 2 (ATRR2) [Arabidopsis thaliana]
gi|110741132|dbj|BAE98659.1| response reactor 2 [Arabidopsis thaliana]
gi|332644847|gb|AEE78368.1| two-component response regulator ARR5 [Arabidopsis thaliana]
Length = 184
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRN----------IDLI 81
L VL V+ R+ + LLR SS +VT V +A + L N I+LI
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLI 84
Query: 82 LTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRN 141
+T+ +P ++G+ LL + E + IPV++MSS++ + + +C+ GA D+L+KPV+
Sbjct: 85 MTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLA 144
Query: 142 ELRNLWQHVWR 152
+++ L + +
Sbjct: 145 DVKRLRDSLMK 155
>gi|50400670|sp|Q9M9B9.2|ARR19_ARATH RecName: Full=Putative two-component response regulator ARR19
Length = 407
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + +T + ++++ +Y+V+ D KA L I++++ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
L + ++PV++MS + +V K GA DY+VKPV+ + N+WQH+ R+
Sbjct: 96 QALKSITSK---LDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
Query: 154 Q 154
+
Sbjct: 153 R 153
>gi|224144996|ref|XP_002325489.1| type-a response regulator [Populus trichocarpa]
gi|222862364|gb|EEE99870.1| type-a response regulator [Populus trichocarpa]
Length = 154
Score = 68.2 bits (165), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 72/123 (58%), Gaps = 10/123 (8%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL----------KGRPRNIDLILT 83
VL V+ R++V LL+ SS +VT +GL+A E L + ++LI+T
Sbjct: 23 VLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYLGLGDEKRTSLEDNVSKVNLIIT 82
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + E + K IPV++MSS++ + + KC+ GA +++KP++++++
Sbjct: 83 DYCMPGMTGYELLKKIKESSMLKEIPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSDV 142
Query: 144 RNL 146
L
Sbjct: 143 VKL 145
>gi|260494747|ref|ZP_05814877.1| phosphate regulon transcriptional regulatory protein PhoB
[Fusobacterium sp. 3_1_33]
gi|336400596|ref|ZP_08581372.1| hypothetical protein HMPREF0404_00663 [Fusobacterium sp. 21_1A]
gi|422939927|ref|ZP_16967294.1| two component response regulator [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|260197909|gb|EEW95426.1| phosphate regulon transcriptional regulatory protein PhoB
[Fusobacterium sp. 3_1_33]
gi|336162312|gb|EGN65289.1| hypothetical protein HMPREF0404_00663 [Fusobacterium sp. 21_1A]
gi|339889988|gb|EGQ79185.1| two component response regulator [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 224
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 19/140 (13%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+++L+VE + I+T L+K+++ V +V DG +A E L N DLI+ ++ LP ++
Sbjct: 1 MKILVVEDEKDLNNIITKHLKKNNFSVDSVYDGEEALEYLD--YGNYDLIILDIMLPKMN 58
Query: 92 GFALLTLVMEHEICKNI-------PVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
G+ E+ KN+ PV+M++++D++ K + GA DYL+KP EL
Sbjct: 59 GY---------EVVKNLRANKNETPVLMLTARDAIEDKIKGLDLGADDYLIKPFDFGELL 109
Query: 145 NLWQHVWRRQSSMVSGNETQ 164
+ + RR+ VS NE Q
Sbjct: 110 ARIRAIVRRKYGNVS-NELQ 128
>gi|443476108|ref|ZP_21066030.1| CheA signal transduction histidine kinase [Pseudanabaena biceps PCC
7429]
gi|443018963|gb|ELS33129.1| CheA signal transduction histidine kinase [Pseudanabaena biceps PCC
7429]
Length = 979
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGR---PRN--IDLILTEVDLP 88
VL+V+ + R+ V L K++YRV DGL+A E L+ P+N + L++ ++++P
Sbjct: 849 VLVVDDSINVRRFVAMTLEKANYRVEQAKDGLEAMEKLRKMQTLPKNAQVSLVICDIEMP 908
Query: 89 SISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE-LRNLW 147
+ GF L C+++PV+M++S+ M GA+ Y KP + NE L+ L
Sbjct: 909 RLDGFGFLVQSRADPHCQDLPVVMLTSRSGNKHRDLAMRLGASAYFSKPFKDNELLQTLS 968
Query: 148 QHVWRRQ 154
Q ++ RQ
Sbjct: 969 QLIFNRQ 975
>gi|356546360|ref|XP_003541594.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 179
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 24/156 (15%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL---KGRPRNID----------- 79
++ DDS R ++ LL+ SS+ VT + KA + L + R D
Sbjct: 11 VLAVDDSIIDRMLIERLLKTSSFHVTTLDSATKALKFLGLVEDELRTFDTTVASEIHQDV 70
Query: 80 ---LILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
LI+T+ +P ++G+ LL + E + KNIPV++MSS++ S + +C+ GA ++ +K
Sbjct: 71 DVNLIITDYCMPGLTGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCLEEGAEEFFLK 130
Query: 137 PVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQK 172
PV++ ++ L H+ + + E QD+ ++
Sbjct: 131 PVQQADVNKLKPHLMKSR-----AKEEQDQPFNNKR 161
>gi|331268264|ref|YP_004394756.1| winged helix family two component transcriptional regulator
[Clostridium botulinum BKT015925]
gi|329124814|gb|AEB74759.1| two component transcriptional regulator, winged helix family
[Clostridium botulinum BKT015925]
Length = 216
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 69/125 (55%), Gaps = 6/125 (4%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+R+L+VE D + ++ L+ S Y V DG +A EV +IDL+L +V LP I
Sbjct: 1 MRILVVEDDLAIGDLIEINLQMSGYEVLKAIDGEEAKEVFD--KEDIDLVLLDVMLPKID 58
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
GF L+ + + K+IPVI +++++SV K + GA DY+VKP EL + V
Sbjct: 59 GFQLIKYIKK----KDIPVIFLTAKNSVIDKVKGLRLGADDYIVKPFENIELLARIEVVE 114
Query: 152 RRQSS 156
RR +
Sbjct: 115 RRYNK 119
>gi|430810303|ref|ZP_19437418.1| two component transcriptional regulator [Cupriavidus sp. HMR-1]
gi|429497232|gb|EKZ95771.1| two component transcriptional regulator [Cupriavidus sp. HMR-1]
Length = 221
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 10/216 (4%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+RVLLVE D Q+V L+ +S V DG A + L ++ D++L ++ LP S
Sbjct: 1 MRVLLVEDDRMIGQVVQDALKDASCAADWVEDGQAALDALD--RQHYDVVLLDLGLPRKS 58
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
G A+LT + +PV++++++D++ + GA DYLVKP +EL + VW
Sbjct: 59 GHAVLTSLRAR--GSAVPVLILTARDALEDRIGGLDAGADDYLVKPFEMDELLARMRAVW 116
Query: 152 RRQSSMVS-----GNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDE 206
RR+S + S G + D S Q + + + + A + G + + E
Sbjct: 117 RRRSGLASSVLGNGRVSLDLSTRQATLAGGAPQQLTNREFALLQALLARPGAILSRAELE 176
Query: 207 QSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVK 242
+ D E ES VE + R+ G ++ +V+
Sbjct: 177 ERIYGWGD-EVESNAVEFLIHGLRRKLGSTIIRNVR 211
>gi|237744968|ref|ZP_04575449.1| two-component response regulator czcR [Fusobacterium sp. 7_1]
gi|289766356|ref|ZP_06525734.1| two-component system response regulator czcR [Fusobacterium sp.
D11]
gi|336417852|ref|ZP_08598135.1| DNA-binding response regulator [Fusobacterium sp. 11_3_2]
gi|423136288|ref|ZP_17123931.1| hypothetical protein HMPREF9942_00069 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|229432197|gb|EEO42409.1| two-component response regulator czcR [Fusobacterium sp. 7_1]
gi|289717911|gb|EFD81923.1| two-component system response regulator czcR [Fusobacterium sp.
D11]
gi|336163117|gb|EGN66051.1| DNA-binding response regulator [Fusobacterium sp. 11_3_2]
gi|371961965|gb|EHO79579.1| hypothetical protein HMPREF9942_00069 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 224
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 19/140 (13%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+++L+VE + I+T L+K+++ V +V DG +A E L N DLI+ ++ LP ++
Sbjct: 1 MKILVVEDEKDLNNIITKHLKKNNFSVDSVYDGEEALEYLD--YGNYDLIILDIMLPKMN 58
Query: 92 GFALLTLVMEHEICKNI-------PVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
G+ E+ KN+ PV+M++++D++ K + GA DYL+KP EL
Sbjct: 59 GY---------EVVKNLRTNKNETPVLMLTARDAIEDKIKGLDLGADDYLIKPFDFGELL 109
Query: 145 NLWQHVWRRQSSMVSGNETQ 164
+ + RR+ VS NE Q
Sbjct: 110 ARIRAIVRRKYGNVS-NELQ 128
>gi|119487004|ref|ZP_01620876.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
gi|119455933|gb|EAW37067.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
Length = 355
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ ++ R ++ + + Y+V +G +A E+++ +P +DL+L ++ +P ++G+
Sbjct: 10 VLIVDDNEVNRDLLARRITREGYQVMLASNGFEALEMMRSQP--LDLVLLDIMMPQMNGY 67
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
+L V + + IP+IM+S+ + + +V +C+ GA DYL KP
Sbjct: 68 QVLEAVKADQSLRYIPMIMISAVNDIESVVRCIELGAEDYLSKP 111
>gi|223940459|ref|ZP_03632310.1| Hpt sensor hybrid histidine kinase [bacterium Ellin514]
gi|223890862|gb|EEF57372.1| Hpt sensor hybrid histidine kinase [bacterium Ellin514]
Length = 832
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VLLVE D ++++ALL + + V P G +A +++ ++ DL+L ++ LP ++GF
Sbjct: 9 VLLVEDDPRMHEVLSALLHEDNITVIHAPSGQQAIAMVQ--EKHYDLMLLDLGLPGMNGF 66
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+L + +H + + IPVI++++ +S + + GA DYL KP ELR
Sbjct: 67 EVLKQLHDHPLERPIPVIVLTAWNSTTDKLRGFELGAVDYLTKPFEAAELR 117
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 29 RMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLP 88
R+ LRVLL + + +++ LL++ Y+ +GL+ + L+ +P DLI +V +P
Sbjct: 547 RLPLRVLLCDDNLINQKVALRLLQQMGYKADVANNGLECLKALERQP--YDLIFMDVQMP 604
Query: 89 SISGFALLTLVMEHE--------ICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRR 140
+ G + + I +I +++ KC+ G DYL KPVR
Sbjct: 605 EMDGLQATQQIRRRQQDPSHPAHFKSPIFIIAITANAMQGDRDKCIAAGMDDYLAKPVRT 664
Query: 141 NELRNLWQHVWRRQSSM--------VSGNETQDESVGQQKIEATSEN 179
+++R + + W + ++ V N + E++G + + A+ N
Sbjct: 665 DDIRLIIER-WGSRITIAEHGDPADVPDNVSIGEALGAKPLAASVPN 710
>gi|404498006|ref|YP_006722112.1| sigma-54-dependent transcriptional response regulator [Geobacter
metallireducens GS-15]
gi|78195604|gb|ABB33371.1| sigma-54-dependent transcriptional response regulator [Geobacter
metallireducens GS-15]
Length = 462
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 10/144 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+V+ + + R+I+ +L YRV A P G +A E L+ D+ILT++ + +SG
Sbjct: 5 ILIVDDERAQREIIQTILEGEGYRVAAAPGGREALEQLE--TSEFDVILTDLKMQGMSGM 62
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
LL V+E + + IMM++ +V + + M +GA DYL KP+ R+ L + + R
Sbjct: 63 ELLERVLEADPLQC--AIMMTAHGTVDSAVEAMKKGAFDYLEKPLERDNLLLTLRRAFER 120
Query: 154 QSSMVSGNETQDESVGQQKIEATS 177
N ++ V Q++++ TS
Sbjct: 121 V------NLLRENRVLQKRLKETS 138
>gi|94314245|ref|YP_587454.1| two component transcriptional regulator [Cupriavidus metallidurans
CH34]
gi|93358097|gb|ABF12185.1| two component transcriptional regulator [Cupriavidus metallidurans
CH34]
Length = 221
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 10/216 (4%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+RVLLVE D Q+V L+ +S V DG A + L ++ D++L ++ LP S
Sbjct: 1 MRVLLVEDDRMIGQVVQDALKDASCAADWVEDGQAALDALD--RQHYDVVLLDLGLPRKS 58
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
G A+LT + +PV++++++D++ + GA DYLVKP +EL + VW
Sbjct: 59 GHAVLTSLRAR--GSAVPVLILTARDALEDRIGGLDAGADDYLVKPFEMDELLARMRAVW 116
Query: 152 RRQSSMVS-----GNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDE 206
RR+S + S G + D S Q + + + + A + G + + E
Sbjct: 117 RRRSGLASSVLGNGRVSLDLSTRQATLTGGAPQQLTNREFALLQALLARPGAILSRAELE 176
Query: 207 QSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVK 242
+ D E ES VE + R+ G ++ +V+
Sbjct: 177 ERIYGWGD-EVESNAVEFLIHGLRRKLGSTIIRNVR 211
>gi|262196327|ref|YP_003267536.1| PAS/PAC sensor hybrid histidine kinase [Haliangium ochraceum DSM
14365]
gi|262079674|gb|ACY15643.1| PAS/PAC sensor hybrid histidine kinase [Haliangium ochraceum DSM
14365]
Length = 1406
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
RVLL + + R V LL + V AVPDG A E ++ RP +L+L +V +P +SG
Sbjct: 634 RVLLADDNADMRAYVGRLL-SERFAVEAVPDGRSALEAVRARP--PELVLADVMMPQLSG 690
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
F LL + + ++ PVI++S++ + M GA DYL KP EL
Sbjct: 691 FELLAAIRDDPAIRDTPVILLSARAGEEARVEGMDAGADDYLTKPFSAREL 741
>gi|388492888|gb|AFK34510.1| unknown [Medicago truncatula]
Length = 167
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 75/137 (54%), Gaps = 20/137 (14%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAW--------EVLKGRPRNI------- 78
++ DDS R ++ LL+ SS+ VT V G KA EV +P +I
Sbjct: 6 VLAVDDSVIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLVEDEVRNEKPHSIAAETDQV 65
Query: 79 ---DLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
+LI+T+ +P ++G+ LL + E K+IPV++ SS++ S + +C+ GA ++ +
Sbjct: 66 VEVNLIITDYCMPGMTGYDLLRKIKESNSLKDIPVVITSSENVPSRINRCLEEGAEEFFL 125
Query: 136 KPVRRNELRNLWQHVWR 152
KPV+++++ L H+ +
Sbjct: 126 KPVQQSDVNKLKPHLLK 142
>gi|258404235|ref|YP_003196977.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfohalobium retbaense DSM 5692]
gi|257796462|gb|ACV67399.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfohalobium retbaense DSM 5692]
Length = 448
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+LL++ + +T ++++A L K Y V DG L+ D+++T++ LP I+G
Sbjct: 6 RILLIDDEPNTLKVLSAFLTKEGYEVGTAKDGRSGLNHLQ--EGGWDMLITDLKLPDITG 63
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
+L V +PV+M+++ S+S + M GA +YL KPV +EL L Q+V+
Sbjct: 64 LDILEQV--KATWPKLPVVMITAYGSISNAVQAMKLGAFNYLTKPVDPDELLLLVQNVFE 121
Query: 153 RQSSMVSGNET 163
R S ++ N+T
Sbjct: 122 R-SQLLEENQT 131
>gi|38346503|emb|CAE02104.2| OSJNBa0020I02.17 [Oryza sativa Japonica Group]
Length = 376
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 41 DSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVM 100
DST +++A L ++ VT +KA + L+ +DL+L +V + ++GF L +
Sbjct: 11 DSTSYMLSAEL---NFSVTVFTSPIKALDFLQNHAEGVDLVLADVHMEEMNGFDFLKVA- 66
Query: 101 EHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
E+ K+I VIMMS++ ++ T+ +C+ GA + KP+ ++NLWQ+V
Sbjct: 67 -RELHKSIQVIMMSTETTMYTMKRCVKLGAQFLVNKPLDAGTIKNLWQYV 115
>gi|380494702|emb|CCF32956.1| hsp90-like protein [Colletotrichum higginsianum]
Length = 1133
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 11/144 (7%)
Query: 28 QRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL----KGRPRNIDLILT 83
+R +RVL+VE + +QI T + K + VTA +G +A E + +G+ D+IL
Sbjct: 840 ERAKIRVLVVEDNAINQQIATKTIMKLGFSVTATWNGKEALEYMAAARQGKHAKPDIILM 899
Query: 84 EVDLPSISGFALLTLVMEH----EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+V +P I G+ L+ H ++IP++ M++ KC G DYL KPV+
Sbjct: 900 DVQMPVIDGYKCTHLLRHHVPYKAYVQDIPIVAMTASAIQGDKEKCTRAGMDDYLAKPVK 959
Query: 140 RNELRNL---WQHVWRRQSSMVSG 160
L + W V R Q+ + G
Sbjct: 960 SKTLERMLVRWSLVKRPQAQTLQG 983
>gi|309791654|ref|ZP_07686146.1| cyclic nucleotide-binding protein [Oscillochloris trichoides DG-6]
gi|308226276|gb|EFO80012.1| cyclic nucleotide-binding protein [Oscillochloris trichoides DG6]
Length = 848
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 78/131 (59%), Gaps = 8/131 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLV+ +D R++++ L + Y+VT V DG A + L + DL+L ++ +P + G+
Sbjct: 168 LLLVDDNDMNREMLSRRLERMDYQVTQVNDGYPALDALHSH--SFDLVLLDIMMPGLDGY 225
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN-----LWQ 148
A+L + + +++PVI++S+ D +++V + + GA DYL KP + L+ L++
Sbjct: 226 AVLRAMRDDVDLRHVPVIVLSALDDIASVVQAIELGADDYLPKPADQVLLKARIGACLFK 285
Query: 149 H-VWRRQSSMV 158
H V++R+ V
Sbjct: 286 HQVYQRELEYV 296
>gi|359495010|ref|XP_003634897.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR9-like [Vitis vinifera]
Length = 141
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 75/126 (59%), Gaps = 9/126 (7%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL----KGRPRNIDLILTEVDLPS 89
++ DDS R+ + LL+ SS++VT + KA E L + R ++LI+T+ +P
Sbjct: 11 VLAVDDSLIDRKWIEKLLKTSSFQVTVLDSVSKALEFLGVQEAEQERKVNLIITDYSMPG 70
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK-PVRRNELRNLWQ 148
++G+ LL + E K+IPV++MSS++ S + +C+ GA D+ +K PV+ +++ L
Sbjct: 71 MTGYDLLRKIKESTSLKDIPVVIMSSENIPSRITRCLEEGAEDFFLKLPVQLSDVNKLRP 130
Query: 149 HV--WR 152
H+ WR
Sbjct: 131 HLLGWR 136
>gi|300694699|ref|YP_003750672.1| response regulator receiver ATP-binding histidine kinase, chea
family [Ralstonia solanacearum PSI07]
gi|299076736|emb|CBJ36076.1| Response regulator receiver ATP-binding histidine kinase, cheA
family [Ralstonia solanacearum PSI07]
Length = 772
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + R++ LL K Y VT DG+ W L+G P DL++T++D+P + G
Sbjct: 651 VLVVDDSLTVRELERKLLEKRGYAVTVAVDGMDGWNALRGTP--FDLVVTDIDMPRMDGI 708
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVK 136
L+TL+ K +PV+++S +D + + GA YL K
Sbjct: 709 ELVTLIKRDAALKALPVMIVSYKDREEDRRRGLEAGADYYLAK 751
>gi|337285857|ref|YP_004625330.1| Fis family two component sigma-54 specific transcriptional
regulator [Thermodesulfatator indicus DSM 15286]
gi|335358685|gb|AEH44366.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Thermodesulfatator indicus DSM 15286]
Length = 451
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+V+ D S ++ + L K YRV DG +A L P DLIL ++ +P + G
Sbjct: 6 ILIVDDDKSLQEFLELFLAKEGYRVAVAGDGEEALSYLSKNPA--DLILADIRMPRLDGI 63
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+ L + E + IPVIM+++ S+ T GA DY+ KP + ++LR+L + +
Sbjct: 64 SFLKALRERAL--RIPVIMITAYASLDTAVTAKQEGAFDYVPKPFKLDQLRDLIKKALAQ 121
Query: 154 QSSMVSGNETQDESVG 169
+ + ++ +G
Sbjct: 122 ERVSIEATVSETSFMG 137
>gi|432329268|ref|YP_007247412.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Aciduliprofundum sp. MAR08-339]
gi|432135977|gb|AGB05246.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Aciduliprofundum sp. MAR08-339]
Length = 195
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
+L VLLV+ + I+ L + + V +G A +++ + R ID+IL ++ LP +
Sbjct: 4 SLHVLLVDDNRELSNIIKTYLSQRGFNVMVANNGRDAMGMIE-KARRIDVILLDLMLPDV 62
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+G +L + EH K++P+I++S ++TV + M GA DYLVKP R EL + +
Sbjct: 63 NGLDMLRSIREH--SKDVPIIIISGVKDLNTVIEAMKAGADDYLVKPFRLGELESKINEI 120
Query: 151 WRRQS 155
+++
Sbjct: 121 LYKKA 125
>gi|222628652|gb|EEE60784.1| hypothetical protein OsJ_14365 [Oryza sativa Japonica Group]
Length = 335
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 71/123 (57%), Gaps = 9/123 (7%)
Query: 32 LRVLLVEAD----DSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDL 87
L ++++ D DST +++A L ++ VT +KA + L+ +DL+L +V +
Sbjct: 12 LSAMVIDEDKCHADSTSYMLSAEL---NFSVTVFTSPIKALDFLQNHAEGVDLVLADVHM 68
Query: 88 PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLW 147
++GF L + E+ K+I VIMMS++ ++ T+ +C+ GA + KP+ ++NLW
Sbjct: 69 EEMNGFDFLKVA--RELHKSIQVIMMSTETTMYTMKRCVKLGAQFLVNKPLDAGTIKNLW 126
Query: 148 QHV 150
Q+V
Sbjct: 127 QYV 129
>gi|418529912|ref|ZP_13095839.1| chemotaxis protein CheA [Comamonas testosteroni ATCC 11996]
gi|371452968|gb|EHN65993.1| chemotaxis protein CheA [Comamonas testosteroni ATCC 11996]
Length = 2158
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 8/119 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKG-RPRNIDLILTEVDLPSISG 92
VL+V+ + R++ LL++ YRVT DGL+A E L+ RP L+L+++++P + G
Sbjct: 2018 VLVVDDSITVRRVTQRLLQREGYRVTLAADGLQAMERLQDERP---TLVLSDIEMPRMDG 2074
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMR--GAADYLVKPVRRNELRNLWQH 149
F LL + + + +PV+M++S+ ++ ++ M R GA YL KP EL L QH
Sbjct: 2075 FDLLRNIRADQKLEGMPVVMITSR--IAQKHREMARDLGANHYLGKPYSDEELLGLIQH 2131
>gi|285019004|ref|YP_003376715.1| type IV pilus response regulatory protein pilh [Xanthomonas
albilineans GPE PC73]
gi|283474222|emb|CBA16723.1| probable type iv pilus response regulatory protein pilh
[Xanthomonas albilineans GPE PC73]
Length = 120
Score = 67.8 bits (164), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAV---PDGLKAWEVLKGRPRNIDLILTEVDLPS 89
R+LL+E + R + T L+K+ Y V AV DGLK R + +LIL +V LP
Sbjct: 3 RILLIEDSPTDRAVFTQWLQKAGYEVLAVDNAEDGLKL-----AREQLPNLILMDVVLPG 57
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+SGF + E ++IPV+++S+++ + M +GA DY+VKP R +EL
Sbjct: 58 MSGFQATRALSRDEATRHIPVLIISTKNMEADRVWGMRQGATDYIVKPPREDEL 111
>gi|220909969|ref|YP_002485280.1| response regulator receiver sensor signal transduction histidine
kinase [Cyanothece sp. PCC 7425]
gi|219866580|gb|ACL46919.1| response regulator receiver sensor signal transduction histidine
kinase [Cyanothece sp. PCC 7425]
Length = 1002
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 118/242 (48%), Gaps = 17/242 (7%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI-DLILTEVDLPSIS 91
R+LLV+ + R V LL + ++V +G A E L+ +++ DL+LT+V +P +
Sbjct: 647 RILLVDDNADMRDYVGRLLSER-WQVETAANGAIALERLQ---QDLPDLVLTDVMMPEMD 702
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
GF LL ++ + ++IPVI++S++ + GA DYL+KP EL +
Sbjct: 703 GFQLLQVLRSDPLTQSIPVILLSARAGEVATIAGLAAGADDYLIKPFSAREL------IA 756
Query: 152 RRQSSMVSGNETQDESVGQQKIE----ATSENDAASNHSSGYMACIQSKGEFIEKGSDEQ 207
R ++ + Q+ES + K E T E A G+ +Q+K F + +
Sbjct: 757 RVETQLQMSRLRQEESANRFKTEFLLTVTHELQAPLATILGWARLLQAK-SFNPDTTTQA 815
Query: 208 SSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSLVPVTEAQGSE 267
+ + + ++ V+D+ D+S L G +L+ ++ + A V P+ EA+G +
Sbjct: 816 LAAIERNATIQAKLVKDLLDISSLLSG-NLRLKAQLFDLVALVQNAMAKFRPLAEAKGID 874
Query: 268 VA 269
+A
Sbjct: 875 LA 876
>gi|398904235|ref|ZP_10652159.1| signal transduction histidine kinase [Pseudomonas sp. GM50]
gi|398176177|gb|EJM63907.1| signal transduction histidine kinase [Pseudomonas sp. GM50]
Length = 633
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
L VLLVE + R +V A+LR + V+ V DG +A V R D IL + LP I
Sbjct: 514 GLNVLLVEDNAVNRTVVEAMLRSLGFTVSVVTDGAQA--VRSAESRTFDAILMDCRLPVI 571
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
G+ + + C ++P+I +++ C+ G DYL KP +R +L+ + Q
Sbjct: 572 DGYEATRQIRQLPGCADVPIIALTANALQGDREACLSAGMNDYLAKPFKRTDLQQILQR- 630
Query: 151 W 151
W
Sbjct: 631 W 631
>gi|224373041|ref|YP_002607413.1| two component transcriptional regulator, winged helix family
[Nautilia profundicola AmH]
gi|223588339|gb|ACM92075.1| two component transcriptional regulator, winged helix family
[Nautilia profundicola AmH]
Length = 216
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
++++LVE + S +I+T L K Y V + DG A+E LK N D+++ ++ LP+I
Sbjct: 1 MKIVLVEDEYSLNEIITEYLEKEGYFVKSFIDGKDAYEYLK--KENFDILILDIHLPNID 58
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
GF++L + + ++ P I +S+ +S+ + K G DY KP EL
Sbjct: 59 GFSILEALQKEKLSP--PTIFISAMNSIEHITKAYDLGCFDYFKKPFYLQEL 108
>gi|296090340|emb|CBI40159.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 73/130 (56%), Gaps = 14/130 (10%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL---KGRPRN------IDLILTE 84
++ DDS R+ + LL+ SS++VT V KA E L K RN ++LI+T
Sbjct: 11 VLAVDDSIIDRKWIEKLLKTSSFQVTVVGSVSKALEFLGLQKAEQRNHHQGTKVNLIITY 70
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+P ++G+ LL + E K IPV++MSS++ S + +C + G D+ +KPV+ +++
Sbjct: 71 YSMPGMTGYDLLKKIKESTSLKGIPVVIMSSENIPSRINRC-LEGEKDFFLKPVQLSDVN 129
Query: 145 NLWQHV--WR 152
L H+ WR
Sbjct: 130 KLRPHLLGWR 139
>gi|152986132|ref|YP_001349017.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
PA7]
gi|150961290|gb|ABR83315.1| probable sensor/response regulator hybrid [Pseudomonas aeruginosa
PA7]
Length = 651
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLVE + + ++ A+LR YRVT V DG++A V + D IL + LP + G+
Sbjct: 517 ILLVEDNPVNQTVIEAMLRSLGYRVTLVADGIQA--VRHAERQQYDAILMDCRLPVLDGY 574
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
A + E + +P+I +++ C+ G DYL KP +R EL+ + Q W
Sbjct: 575 AATREIRAQENGRQVPIIALTANALQGDRENCLHAGMNDYLAKPFKRAELQRILQR-W 631
>gi|425441345|ref|ZP_18821622.1| putative Chemotaxis protein CheY homolog [Microcystis aeruginosa
PCC 9717]
gi|389717967|emb|CCH98011.1| putative Chemotaxis protein CheY homolog [Microcystis aeruginosa
PCC 9717]
Length = 129
Score = 67.8 bits (164), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 35 LLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFA 94
++V+ + R+++ L K+ YR+ DGL+AWE L+ DLIL ++++P ++G
Sbjct: 1 MIVDDSVTAREMLAISLVKAGYRIEKARDGLEAWEKLQA-GLACDLILCDIEMPRLNGLE 59
Query: 95 LLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
LL+ + E E + IPV M++S+ S + +GA Y VKP
Sbjct: 60 LLSRLQEDEQLQGIPVAMITSRGSQKMQHLAAAKGAKGYFVKP 102
>gi|255647513|gb|ACU24220.1| unknown [Glycine max]
Length = 191
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 85/155 (54%), Gaps = 28/155 (18%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL---KGRPRN------------- 77
++ DDS R ++ LL+ SS+ VTA+ G KA + L + RN
Sbjct: 11 VLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGLAEDEQRNKEPPSIALESHQD 70
Query: 78 --IDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLV 135
++LI+T+ +P ++G+ LL + E + K+IPV++MSS++ + + +C+ GA ++ +
Sbjct: 71 VEVNLIITDYCMPEMTGYDLLKKIKESKSLKDIPVVIMSSENVPARINRCLEDGADEFFL 130
Query: 136 KPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQ 170
KPV+++++ L H+ + ++ +DE V Q
Sbjct: 131 KPVQQSDVNKLRPHLLK--------SKVKDEEVQQ 157
>gi|402299003|ref|ZP_10818643.1| transcriptional regulator [Bacillus alcalophilus ATCC 27647]
gi|401725795|gb|EJS99062.1| transcriptional regulator [Bacillus alcalophilus ATCC 27647]
Length = 225
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEV-LKGRPRNIDLILTEVDLPSIS 91
R+L++E + + Q++ A +K+ Y+V V DG +A +V L RP DL+L +V LP +
Sbjct: 3 RILIIEDEKAISQVLKAYTKKAGYQVEQVYDGKEALDVFLSFRP---DLVLLDVMLPYKN 59
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
G+ LL + E +C PVIM+++ D V + GA DY+ KP +E+ Q V
Sbjct: 60 GWELLKEIRECSMC---PVIMLTALDDVQDKLLGLHEGADDYITKPFIGDEVIARIQAVL 116
Query: 152 RRQSSMVSGNET 163
RR S E
Sbjct: 117 RRSPSFRENEEI 128
>gi|297723043|ref|NP_001173885.1| Os04g0348800 [Oryza sativa Japonica Group]
gi|255675355|dbj|BAH92613.1| Os04g0348800 [Oryza sativa Japonica Group]
Length = 806
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 71/123 (57%), Gaps = 9/123 (7%)
Query: 32 LRVLLVEAD----DSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDL 87
L ++++ D DST +++A L ++ VT +KA + L+ +DL+L +V +
Sbjct: 26 LSAMVIDEDKCHADSTSYMLSAEL---NFSVTVFTSPIKALDFLQNHAEGVDLVLADVHM 82
Query: 88 PSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLW 147
++GF L + E+ K+I VIMMS++ ++ T+ +C+ GA + KP+ ++NLW
Sbjct: 83 EEMNGFDFLKVA--RELHKSIQVIMMSTETTMYTMKRCVKLGAQFLVNKPLDAGTIKNLW 140
Query: 148 QHV 150
Q+V
Sbjct: 141 QYV 143
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 28 QRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDL 87
Q +AL+VL++E Q T + VT +KA + L+ ++ DL+L EV +
Sbjct: 447 QHIALKVLMMEKIRELLQGCTIYVN-----VTVYTSPIKALDFLENHAQDFDLVLAEVHM 501
Query: 88 PSISGFALLTLVMEHEICKNIPVIMMSSQDS 118
++GFA LT +I K+I VI SS+++
Sbjct: 502 EELNGFAFLT--ASRKIHKSIQVINDSSKNT 530
>gi|118579419|ref|YP_900669.1| two component sigma54 specific Fis family transcriptional regulator
[Pelobacter propionicus DSM 2379]
gi|118502129|gb|ABK98611.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Pelobacter propionicus DSM 2379]
Length = 455
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+++ +++ R +++ +L + YR +G++ L+G D IL ++ +P + G
Sbjct: 7 ILIIDDEENLRHMLSVMLSRQGYRADCAANGVEGLAALRGTV--YDFILCDIRMPEMDGK 64
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
A L + ++ P+IMMS+ +V T +CM GA DY+ KP +++E+
Sbjct: 65 AFLQAALRDQVGS--PIIMMSAYGTVDTAVECMKLGAYDYISKPFKKDEI 112
>gi|428773759|ref|YP_007165547.1| response regulator receiver protein [Cyanobacterium stanieri PCC
7202]
gi|428688038|gb|AFZ47898.1| response regulator receiver protein [Cyanobacterium stanieri PCC
7202]
Length = 121
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGR-PRNIDLILTEVDLPSIS 91
++LLVE +TR+I++ LL K V +V G A VLK P DL++ ++ LP ++
Sbjct: 3 KILLVEDSKTTREIISNLLTKQGLLVHSVASGEDALTVLKTTIP---DLVILDIILPKMN 59
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
G+ + + E +N+PVI+ SS+ Y M +GA DY+ KP + +EL + +
Sbjct: 60 GYEVCRHIKSTEKTQNVPVILCSSKKEEFDRYWGMKQGADDYICKPFQASELMKMIGKLL 119
Query: 152 RR 153
R+
Sbjct: 120 RK 121
>gi|288573393|ref|ZP_06391750.1| response regulator receiver modulated metal dependent
phosphohydrolase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288569134|gb|EFC90691.1| response regulator receiver modulated metal dependent
phosphohydrolase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 356
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+VE D TR+++ ++ YRV G +A +L G ++D+IL +V +P + G
Sbjct: 4 VLIVEDDRITRKVLAMGIKNLGYRVMEAESGEEALSMLLGVDSDVDMILMDVVMPGMDGI 63
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ EI I IM++S DS TV + +M GA DY+ KPV N+L
Sbjct: 64 ETTGRIRSMEIPAVI--IMLTSDDSSETVKRAVMAGADDYMTKPVDPNQL 111
>gi|444916125|ref|ZP_21236248.1| PAS/PAC domain protein [Cystobacter fuscus DSM 2262]
gi|444712625|gb|ELW53542.1| PAS/PAC domain protein [Cystobacter fuscus DSM 2262]
Length = 1020
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+LL + + R+ V+ LL +RV AV DG +A E P +L+LT+V +P + G
Sbjct: 638 RILLADDNADMREYVSRLL-GERWRVEAVADGRRALEAALREP--PELVLTDVMMPGLDG 694
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
F LL + E +++PVIM+S++ + + GA DYL+KP EL
Sbjct: 695 FGLLRALRAEERTRSVPVIMLSARAGEEAHVEGLEAGADDYLIKPFSAREL 745
>gi|346225089|ref|ZP_08846231.1| response regulator receiver protein [Anaerophaga thermohalophila
DSM 12881]
Length = 121
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
MA VL+V+ +S R++V L+ Y V DG A + L GRP ID+I+T++ +P+
Sbjct: 1 MAKTVLIVDDSESIREVVNFTLQNEGYNVLVGVDGDDALQFLDGRP--IDIIITDLHMPN 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
++G L+ V E + K+IP++ ++++ + + GA +++KP
Sbjct: 59 MNGLELIRKVREMDDYKHIPILFLTTESQAAKKMEAKQAGATGWIIKP 106
>gi|330504989|ref|YP_004381858.1| integral membrane sensor hybrid histidine kinase [Pseudomonas
mendocina NK-01]
gi|328919275|gb|AEB60106.1| integral membrane sensor hybrid histidine kinase [Pseudomonas
mendocina NK-01]
Length = 778
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 34 VLLVEADDSTRQIVT-ALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
VL+VE D++ Q+VT +L K YRV +G +A E+L+G ++D +L + +P + G
Sbjct: 649 VLIVE-DNAINQLVTRGMLLKLGYRVRTADNGAEALELLRGE--SVDAVLLDCQMPVMDG 705
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
FA + C ++PV+ +++ +C+ G +DYL KPV+ ELR L H W
Sbjct: 706 FATCRAIRALPGCADVPVLAITAHSHSGDRERCLAAGMSDYLAKPVKFEELRVL-LHDW 763
>gi|409993016|ref|ZP_11276175.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
gi|409936121|gb|EKN77626.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
Length = 352
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ ++ R ++ L+K Y V +G +A ++++ P +DL+L ++ +P ++G+
Sbjct: 8 VLIVDDNEINRDLLARRLQKQGYDVLVASNGFEALKIMRSTP--LDLVLLDIMMPQMNGY 65
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+L + ++IPVIM+S+ + + ++ +C+ GA DYL KP LR
Sbjct: 66 QVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLSKPFNHVLLR 116
>gi|300311026|ref|YP_003775118.1| chemotaxis response regulator receiver domain-containing protein
[Herbaspirillum seropedicae SmR1]
gi|300073811|gb|ADJ63210.1| chemotaxis response regulator receiver domain protein
[Herbaspirillum seropedicae SmR1]
Length = 134
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 35 LLVEADDSTRQIVTALLRKSSY-RVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
L+V+ + R+I+ LL++ Y +VT DG AW++L+ I ++T+ ++P + G
Sbjct: 8 LVVDDFSTMRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISFVITDWNMPGMDGL 67
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
LL + E K +PV+M+S++ + GA Y+VKP L + + +R
Sbjct: 68 GLLKKIRETPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQR 127
Query: 154 QSSM 157
+SSM
Sbjct: 128 RSSM 131
>gi|297810093|ref|XP_002872930.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318767|gb|EFH49189.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 369
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VLL+++D + ++ ++RK YRV A ++ + + IDL+L + L ++ +
Sbjct: 16 VLLLDSDATCLANLSEMIRKCGYRVVATTRAEDLPLIINNKDKKIDLVLADFRLIEMNKY 75
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
LL + IC+ IPV++ S + +C+ RGA L KP + N+L+ LWQ RR
Sbjct: 76 ELLEKI--RLICE-IPVVV-SDAYVKDAIVECLCRGAKLCLEKPFKENDLKLLWQFTVRR 131
Query: 154 QSSMVSGNETQDESVGQQKIEATSENDAASNHSS 187
Q +S Q I +ND+ +N+ S
Sbjct: 132 QRDFLS----------QIDINPPEKNDSITNNQS 155
>gi|238923307|ref|YP_002936822.1| response regulator [Eubacterium rectale ATCC 33656]
gi|238874981|gb|ACR74688.1| response regulator [Eubacterium rectale ATCC 33656]
Length = 218
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 6/128 (4%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M + +L+VE + ++ L K+ Y T DG++A ++L+ RN DLI+ +V LP
Sbjct: 1 MMIEILIVEDEKPISDLIRLNLMKAGYSCTCAFDGMEAADILE--ERNFDLIILDVMLPK 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
++GF L ME+ IPVI ++++ ++ + + GA DY+VKP EL
Sbjct: 59 LNGFEL----MEYIKPLGIPVIFLTAKATLDDRLRGLTSGAEDYMVKPFEIVELLARVNI 114
Query: 150 VWRRQSSM 157
V RR + M
Sbjct: 115 VLRRYNKM 122
>gi|20808142|ref|NP_623313.1| response regulator [Thermoanaerobacter tengcongensis MB4]
gi|20516731|gb|AAM24917.1| Response regulators consisting of a CheY-like receiver domain and a
HTH DNA-binding domain [Thermoanaerobacter tengcongensis
MB4]
Length = 334
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGR-PRNIDLILTEVDLPSISG 92
+L+V+ D TR+I+ +L K Y + DG +A+ + K P D+++ +V LP +SG
Sbjct: 30 ILIVDDDRFTRRILRDILEKEGYSIIEARDGEEAFRLYKEMLP---DMVILDVVLPGMSG 86
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL----RNLWQ 148
F LL ++ + E +P+++++++ K + GA DYLVKPV EL NL+Q
Sbjct: 87 FDLLKILRKEEENLMLPILVLTAKGDFEEKIKGLELGADDYLVKPVNEKELVIKVNNLFQ 146
Query: 149 HV 150
+
Sbjct: 147 RI 148
>gi|406917000|gb|EKD55886.1| response regulator receiver protein [uncultured bacterium]
Length = 271
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 29 RMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLP 88
R+ +L+++ D+S +++T L+ + V A +G A E K DL++T++ +P
Sbjct: 5 RITGNILVIDDDESILRLLTKFLKSEGHGVAAEINGSDAIETFK--KEKFDLVITDMYMP 62
Query: 89 SISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQ 148
+ G ++ + +I +NIP+I++++ S++ V + GA +Y+ KPV NE+R + Q
Sbjct: 63 DLDGLDIIRNI--KDINQNIPIIVLTAAGSITNVVHSLKLGAFNYMTKPVNINEVREIIQ 120
Query: 149 HVW 151
+
Sbjct: 121 KAF 123
>gi|307153266|ref|YP_003888650.1| response regulator receiver protein [Cyanothece sp. PCC 7822]
gi|306983494|gb|ADN15375.1| response regulator receiver protein [Cyanothece sp. PCC 7822]
Length = 402
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAW-EVLKGRPRNIDLILTEVDLPSIS 91
+++ ++ D + R+ V +L+++ Y+VT + + L+A +V + P DLIL ++ +P +
Sbjct: 282 KIVCIDDDITIRKNVENILQENGYQVTIIGEPLQALSQVFEIEP---DLILCDIAMPKLD 338
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
G+ L ++ + + + IP+IM++ Q++ + M GA DYL KP R+EL L
Sbjct: 339 GYELCAMLRQSTVFRQIPIIMLTGQETFIDRVRARMVGATDYLTKPFGRSELLLL 393
>gi|116049556|ref|YP_791640.1| sensor/response regulator hybrid [Pseudomonas aeruginosa
UCBPP-PA14]
gi|421175303|ref|ZP_15632993.1| sensor/response regulator hybrid [Pseudomonas aeruginosa CI27]
gi|115584777|gb|ABJ10792.1| putative sensor/response regulator hybrid [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404532594|gb|EKA42472.1| sensor/response regulator hybrid [Pseudomonas aeruginosa CI27]
Length = 651
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLVE + + ++ A+LR YRVT V DG++A V + D IL + LP + G+
Sbjct: 517 ILLVEDNPVNQTVIEAMLRSLGYRVTLVADGIQA--VRSAERQRYDAILMDCRLPVLDGY 574
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH-VWR 152
+ + E + +P+I +++ C+ G DYL KP +R EL+ + Q +
Sbjct: 575 SATREIRAQENGRRVPIIALTANALQGDRENCLQAGMNDYLAKPFKRAELQRILQRWIGS 634
Query: 153 RQSSMVSGNET 163
+ V+ NET
Sbjct: 635 QPERPVTSNET 645
>gi|147837871|emb|CAN60564.1| hypothetical protein VITISV_013996 [Vitis vinifera]
Length = 154
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 75/131 (57%), Gaps = 11/131 (8%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVL----------KGRPRNIDLILT 83
VL V+ + R+++ LL+ S RVT +GL+A E L K ++LI+T
Sbjct: 23 VLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGLGDNQQTSHKASVSKVNLIIT 82
Query: 84 EVDLPSISGFALLTLVMEHE-ICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
+ +P ++G+ LL + I K +PV++MSS++ + + KC+ GA +++KP+++++
Sbjct: 83 DYCMPGMTGYELLKRXKQQSSILKEVPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSD 142
Query: 143 LRNLWQHVWRR 153
++ L ++ R
Sbjct: 143 VKKLRCYLKHR 153
>gi|421619136|ref|ZP_16060100.1| sigma-54 dependent transcriptional regulator/response regulator
FleR [Pseudomonas stutzeri KOS6]
gi|409778932|gb|EKN58612.1| sigma-54 dependent transcriptional regulator/response regulator
FleR [Pseudomonas stutzeri KOS6]
Length = 464
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
MA ++LLVE D + R+ + L+ Y AV A LK P L++++V++P
Sbjct: 1 MAAKILLVEDDHALREALGVTLQLGGYEYRAVDCAEAALVALKREP--FGLVVSDVNMPG 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLW-Q 148
+ G LL LV +H IPV++M++ +V+ M +GA DYLVKP L L +
Sbjct: 59 MDGHELLALVRQHH--PQIPVLLMTAFGAVARAVDAMRQGAVDYLVKPFEPQTLLELLGR 116
Query: 149 HV 150
HV
Sbjct: 117 HV 118
>gi|386381303|ref|ZP_10067070.1| two-component system response regulator [Streptomyces tsukubaensis
NRRL18488]
gi|385671243|gb|EIF94219.1| two-component system response regulator [Streptomyces tsukubaensis
NRRL18488]
Length = 255
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 90/220 (40%), Gaps = 25/220 (11%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
L VLLVE DD+ R+ V L + YRVT DGL E R DL++ +V LP +
Sbjct: 27 LSVLLVEDDDAIRRSVQLALERYGYRVTVAADGLGGLEAF--RAGGHDLLILDVMLPELD 84
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
G L + E +PV+MMS++ V + GA DY+VKPV + + +
Sbjct: 85 GIGLCCRIREQ---SQVPVLMMSARGDALDVVAGLEAGADDYVVKPVDTAVMVARIRALL 141
Query: 152 RRQSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMAC------IQSKGEFIEKGSD 205
RR T E+V I E D G ++ + GE +
Sbjct: 142 RRA--------TFHEAV----IAGPPERDGGKPLVFGDLSVDTLGMEVHRAGELVPLTPT 189
Query: 206 EQSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQNDVKMQN 245
E +F A V D L R +W + D ++ +
Sbjct: 190 ELRLLL--EFAATPGVVLDRRKLLRDVWDYGWEGDTRVVD 227
>gi|86158253|ref|YP_465038.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774764|gb|ABC81601.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 357
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
A R+L+V+ D + R ++T LLR+ Y T V A + + R + L++++V +P+
Sbjct: 8 ATRILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALD--EARKTDYPLVISDVRMPAR 65
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL-RNLWQH 149
GF LL + E + VIM+++ +C+ GAADYL+KP + EL R + +
Sbjct: 66 DGFWLLEQM--REASPDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIERA 123
Query: 150 VWRRQSSMVSGN 161
+ RR+ + G
Sbjct: 124 LGRRRLELARGR 135
>gi|83592721|ref|YP_426473.1| acetoacetate metabolism regulatory protein AtoC [Rhodospirillum
rubrum ATCC 11170]
gi|386349450|ref|YP_006047698.1| acetoacetate metabolism regulatory protein AtoC [Rhodospirillum
rubrum F11]
gi|83575635|gb|ABC22186.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodospirillum rubrum ATCC 11170]
gi|346717886|gb|AEO47901.1| acetoacetate metabolism regulatory protein AtoC [Rhodospirillum
rubrum F11]
Length = 460
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ D++ RQ+++A L K RV DGL+A EV R + D++L ++ +P ++G
Sbjct: 8 VLIVDDDEAIRQMLSAFLSKEGLRVVTARDGLEAIEVF--RLQRTDVVLLDIRMPRMNGL 65
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH---V 150
++E + + VI+M++ V T + + GA DY++KP E+R L + +
Sbjct: 66 EAAKAILEMD--RGTAVILMTAFAEVCTAVQAIKDGAFDYVIKPFDLEEIRLLVRRALEI 123
Query: 151 WRRQSSMVSGNETQDESVGQQKI 173
++ +VS E G + I
Sbjct: 124 RSMRADIVSLRRELSERYGAEGI 146
>gi|444916234|ref|ZP_21236353.1| putative sensor histidine kinase [Cystobacter fuscus DSM 2262]
gi|444712447|gb|ELW53370.1| putative sensor histidine kinase [Cystobacter fuscus DSM 2262]
Length = 1117
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+LLV+ + R V+ LL Y V +GL+A EVL+ R DL+L++V +P + GF
Sbjct: 630 LLLVDDNADMRAYVSRLL-AGRYTVETAANGLEALEVLQAR--VPDLVLSDVMMPGLDGF 686
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
LL + E + +PVI++S++ + + +GA DYLVKP EL
Sbjct: 687 GLLRRLREEPRTRGVPVILLSARAGEEATVEGLEQGATDYLVKPFSAREL 736
>gi|197122437|ref|YP_002134388.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|220917204|ref|YP_002492508.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196172286|gb|ACG73259.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|219955058|gb|ACL65442.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 357
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
A R+L+V+ D + R ++T LLR+ Y T V A + + R + L++++V +P+
Sbjct: 8 ATRILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALD--EARKTDYPLVISDVRMPAR 65
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL-RNLWQH 149
GF LL + E + VIM+++ +C+ GAADYL+KP + EL R + +
Sbjct: 66 DGFWLLEQM--REASPDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIERA 123
Query: 150 VWRRQSSMVSGN 161
+ RR+ + G
Sbjct: 124 LGRRRLELARGR 135
>gi|114565936|ref|YP_753090.1| sensory box histidine kinase/response regulator [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|114336871|gb|ABI67719.1| Hpt sensor hybrid histidine kinase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 497
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Query: 13 EMNGNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK 72
E+N + K E L +RVLLVE + ++IV +L + V +GL+A +L+
Sbjct: 260 ELNREQFENKEEALLDFTPIRVLLVEDNPLNQKIVGQMLYNYGFEVIMASNGLEALRILQ 319
Query: 73 GRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAAD 132
+P NI +L ++ +P + G+ + +H ++IP+I +++ KC+ G
Sbjct: 320 DKPVNI--VLMDMQMPVMDGYEATQFIRQHSKWRDIPIIAITAHSLPGDREKCLACGCTS 377
Query: 133 YLVKPVRRNELRNLWQHVWRR 153
Y+ KP + +EL L + ++
Sbjct: 378 YIAKPFKAHELVQLMKEYIKQ 398
>gi|168002238|ref|XP_001753821.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695228|gb|EDQ81573.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 124
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 74/122 (60%), Gaps = 11/122 (9%)
Query: 36 LVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVL--------KGRPRNIDLILTEV 85
++ DDS+ ++++ LL+ SSYRVT V ++A +VL +I+LI+T+
Sbjct: 3 VLAVDDSSIDQRVIERLLKTSSYRVTTVNSAVRALDVLGLSESRSASSTRLDINLIMTDY 62
Query: 86 DLPSISGFALLTLV-MEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+P ++G+ LL V + K IPV++MSS++ + + +C+ GA ++++KPV+ +++
Sbjct: 63 CMPEMTGYDLLKRVKAQTSALKEIPVVLMSSENDSNRIERCLAEGAEEFIIKPVKMADVK 122
Query: 145 NL 146
L
Sbjct: 123 RL 124
>gi|295108821|emb|CBL22774.1| diguanylate cyclase (GGDEF) domain [Ruminococcus obeum A2-162]
Length = 710
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 11/137 (8%)
Query: 4 VVLNDEELKEMN---GNEGIAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTA 60
V +DE+LKE N G ++ R+L+V+ + R+I++ +L + Y +
Sbjct: 284 VTEHDEQLKEQQESANNNGSKAYK-------YRILVVDDSEMNREILSEILNEE-YDIIE 335
Query: 61 VPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVS 120
G ++L+ I L+L ++ +P + GF +L + H ++IPVIM+SS+DS
Sbjct: 336 ADSGDTCIDMLRKYETGISLVLLDIVMPGMDGFGVLNYMNHHHYLEDIPVIMISSEDSTE 395
Query: 121 TVYKCMMRGAADYLVKP 137
TV + G +DY+ +P
Sbjct: 396 TVRRAYEMGVSDYINRP 412
>gi|255559713|ref|XP_002520876.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223540007|gb|EEF41585.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 155
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 72/123 (58%), Gaps = 10/123 (8%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWE----------VLKGRPRNIDLILT 83
VL V+ + R++V LL+ S +VT +GL+A E L+ ++LI+T
Sbjct: 24 VLAVDDNLIDRKLVEKLLKNSCCKVTTAENGLRALEYLGLGDDDRNCLENNVSKVNLIIT 83
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + E I K +PV+++SS++ + + KC+ GA +++KP++ +++
Sbjct: 84 DYCMPGMTGYELLKKIKESSIMKEVPVVIVSSENIPTRINKCLEEGAQMFMLKPLKLSDV 143
Query: 144 RNL 146
+ L
Sbjct: 144 KKL 146
>gi|323139254|ref|ZP_08074308.1| adenylate/guanylate cyclase [Methylocystis sp. ATCC 49242]
gi|322395475|gb|EFX98022.1| adenylate/guanylate cyclase [Methylocystis sp. ATCC 49242]
Length = 539
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+L+V+ + S R ++ L + + V +G A ++K DL+L ++ +P ISG
Sbjct: 195 RILVVDDNASNRDLLKRRLERQGHAVVLAENGSSALAIVK--QAQFDLVLLDLLMPDISG 252
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
F +L+++ ++IPVIM+S+ + + T+ +C+ GA DYL KP
Sbjct: 253 FDVLSILKSDLSLRDIPVIMISALNEIDTIVRCIEAGAEDYLAKP 297
>gi|322419892|ref|YP_004199115.1| Fis family two component sigma54 specific transcriptional regulator
[Geobacter sp. M18]
gi|320126279|gb|ADW13839.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter sp. M18]
Length = 461
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+++LL+E DD +R+ + LL+ S + + G + ++L G P D++L+++ LP ++
Sbjct: 8 IKILLIEDDDGSREALLILLKASGFTMKGCSSGKEGLDLLAGEP--FDIVLSDLFLPDMN 65
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
G +LT V + VI+++ S T + M +GA DY+ KP+ +ELR
Sbjct: 66 GIDILTRVKQD--SPRTEVILVTGHGSAETAVQAMKKGAYDYITKPLNIDELR 116
>gi|404495822|ref|YP_006719928.1| sigma-54-dependent transcriptional response regulator [Geobacter
metallireducens GS-15]
gi|418067744|ref|ZP_12705078.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter metallireducens RCH3]
gi|78193436|gb|ABB31203.1| sigma-54-dependent transcriptional response regulator [Geobacter
metallireducens GS-15]
gi|373558248|gb|EHP84600.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Geobacter metallireducens RCH3]
Length = 454
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M RVL+++ +++ R ++ A+LRK+ Y DG +A + P D I+ ++ +P
Sbjct: 1 MKQRVLVIDDEENLRHMLGAMLRKNGYHADEAADGEQALAMAGEHP--YDFIICDIRMPV 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ G L E I I IMMS+ ++ T +CM GA DY+ KP + +E+
Sbjct: 59 LDGLGFLRRAQEAGIGGTI--IMMSAYGTIDTALQCMKEGAYDYVSKPFKNDEI 110
>gi|400595315|gb|EJP63120.1| putative histidine kinase HHK6p [Beauveria bassiana ARSEF 2860]
Length = 1379
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 28 QRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKG--RPRNI--DLILT 83
+R A +L+VE + ++I T +RK ++VTA +G +A E + G RN+ D+IL
Sbjct: 1100 ERAAFHILVVEDNAVNQKIATRTIRKLGFQVTAAWNGREALEYVLGASEGRNVKPDIILM 1159
Query: 84 EVDLPSISGFALLTLVMEHE----ICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+V +P I G+ L+ H + N+P++ M++ KC G DYL KPV
Sbjct: 1160 DVQMPIIDGYKCTHLMRHHRPYKGLIHNVPIVAMTASAIQGDREKCKRAGMDDYLAKPVT 1219
Query: 140 RNELRNL---WQHVWRRQSSM 157
+ L + W RR+SS+
Sbjct: 1220 MSILERMLIRWCVSRRRESSV 1240
>gi|414880045|tpg|DAA57176.1| TPA: hypothetical protein ZEAMMB73_006515 [Zea mays]
Length = 387
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 112 MMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ 154
+MS++D VS V KC+ GAA+YLVKP+R NEL NLW HVWRR+
Sbjct: 22 VMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVWRRR 64
>gi|187933594|ref|YP_001887202.1| response regulator [Clostridium botulinum B str. Eklund 17B]
gi|187721747|gb|ACD22968.1| response regulator [Clostridium botulinum B str. Eklund 17B]
Length = 218
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M + VL++E D++ ++ L Y+ + DGL+A+ +LK + DLIL ++ LP
Sbjct: 1 MKINVLIIEDDEAISNLIKINLSMVGYKSKQLFDGLEAFNLLK--EESFDLILMDIMLPG 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF L+ + + NIPVI +++++ ++ + GA DY+VKP EL +
Sbjct: 59 MDGFELMKKIKDL----NIPVIFLTAKNGLADKVTGLKSGAEDYIVKPFETVELLARIEI 114
Query: 150 VWRRQSS 156
V RR S
Sbjct: 115 VLRRYSK 121
>gi|157374862|ref|YP_001473462.1| diguanylate cyclase [Shewanella sediminis HAW-EB3]
gi|157317236|gb|ABV36334.1| diguanylate cyclase [Shewanella sediminis HAW-EB3]
Length = 420
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 6/120 (5%)
Query: 27 LQR-MALRVLLVEADDS--TRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILT 83
LQR ++VL+ ADDS +R+ V +LL + Y+V DG AWEVL+ +P +I L++T
Sbjct: 116 LQRNQTVKVLV--ADDSVVSRKFVRSLLEQHLYQVVEADDGNSAWEVLQNQP-DIQLLIT 172
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ ++P + GF L+ V E + + +I +SS D S + + GA D+L KP E
Sbjct: 173 DYNMPGLDGFGLILKVREKFSREELAIIGLSSDDDESLSARFIKNGANDFLQKPFVHEEF 232
>gi|197116480|ref|YP_002136907.1| response receiver-modulated cyclic diguanylate phosphodiesterase
[Geobacter bemidjiensis Bem]
gi|197085840|gb|ACH37111.1| response receiver-modulated cyclic diguanylate phosphodiesterase
[Geobacter bemidjiensis Bem]
Length = 357
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
RV+LV+ D + V LL S + VT+ +G +A ++L+ P D++LT+V++P +SG
Sbjct: 8 RVVLVDDDPYVLESVALLLSVSGFEVTSFSNGHEALQLLRRSPP--DVVLTDVNMPQMSG 65
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
LL + H+ ++IPVI+M++ + + +GA D+++KP +
Sbjct: 66 IELLEQI--HDFDRDIPVILMTAYAELEMAVSAIKKGAFDFIIKPFK 110
>gi|428211716|ref|YP_007084860.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Oscillatoria acuminata PCC 6304]
gi|428000097|gb|AFY80940.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Oscillatoria acuminata PCC 6304]
Length = 120
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+V+ + R++V+ +L+KS V DG++A E ++ +P DL++T++ +P ++G+
Sbjct: 4 ILIVDDSGTVREMVSDILKKSGLEVIEASDGVEAKEQIQAKPP--DLVVTDIVMPRMNGY 61
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
L + +NIPVIM +S+ Y M +GA Y+ KP R EL
Sbjct: 62 ELCRWLKNDPKAQNIPVIMCTSKSQEFDRYWGMKQGADAYITKPFRPAEL 111
>gi|402771988|ref|YP_006591525.1| adenylate/guanylate cyclase [Methylocystis sp. SC2]
gi|401774008|emb|CCJ06874.1| Adenylate/guanylate cyclase [Methylocystis sp. SC2]
Length = 547
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
R+L+V+ + S R+++ L + + V +G + E+L+ P DLIL ++ +P ISG
Sbjct: 197 RILVVDDNASNRELLKRRLERQGHSVALAENGSCSLEMLRKEP--FDLILLDLLMPDISG 254
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
+L+++ ++IPVI++S+ + + ++ +C+ GA DYL KP
Sbjct: 255 LDVLSILKSEPDLRDIPVIVISALNEIDSIVRCIQAGAEDYLAKP 299
>gi|153004813|ref|YP_001379138.1| two component sigma54 specific Fis family transcriptional regulator
[Anaeromyxobacter sp. Fw109-5]
gi|152028386|gb|ABS26154.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter sp. Fw109-5]
Length = 470
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + + R+++ A+L++ Y VT DG +A VL P + +++T++ +P + G
Sbjct: 4 VLIVDDEVNIRRVLAAMLKREGYEVTTAADGEQALGVLHKTP--VHVVVTDLVMPKVGGM 61
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
LL V ++PVIM+++ SV + + GA DY+ KP ++EL+ + R
Sbjct: 62 ELLRRVGAD--FPDVPVIMITAHGSVDSAVGALKAGAFDYITKPFEQDELKKVIAKAAR 118
>gi|347731496|ref|ZP_08864592.1| response regulator [Desulfovibrio sp. A2]
gi|347519815|gb|EGY26964.1| response regulator [Desulfovibrio sp. A2]
Length = 117
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 35 LLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGFA 94
++V+ + R +V +++K ++VT DGL E L + +DLI+++V++P + GF
Sbjct: 1 MIVDDSKTVRNLVAFIMKKEGFKVTTAEDGLDGLEKLYSSEK-VDLIISDVNMPRMDGFT 59
Query: 95 LLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ V E E +++P++++S++ + M GA Y+VKP + ++
Sbjct: 60 FIKTVREQEAYRDLPIVVLSTEGQEKDIQMGMSLGANLYMVKPAQPEKM 108
>gi|242093586|ref|XP_002437283.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
gi|241915506|gb|EER88650.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
Length = 685
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR---NIDLILTEVDL 87
LRVL VE D R+++ L+ +Y T V + A ++L+ R DL+++ V +
Sbjct: 9 GLRVLAVEHDRVCRKVLERQLQYCNYNATMVTNAQTALDMLRERKEYGNQFDLVISNVVM 68
Query: 88 P--SISGFALLTLVMEHEICKNIPVI------------------MMSSQDSVSTVYKCMM 127
P ++ GF LL L+ + ++PVI ++S+ T+ K +
Sbjct: 69 PKPNMDGFKLLELI---GLEMDLPVICNKALAQTYFLHFYGTLYVLSANSETQTIMKGIK 125
Query: 128 RGAADYLVKPVRRNELRNLWQHVWR 152
GA +Y+VKPVR +LR +W HV +
Sbjct: 126 HGACEYMVKPVRLEQLRGIWTHVVK 150
>gi|427724746|ref|YP_007072023.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Leptolyngbya sp. PCC 7376]
gi|427356466|gb|AFY39189.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Leptolyngbya sp. PCC 7376]
Length = 582
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEV-LKGRPRNIDLILTEVDLPSISG 92
+LL+E + R +L+K + VT DG + + LK P DLIL +V +P + G
Sbjct: 4 ILLIEDTEILRMCTARILQKEQFAVTTAEDGQEGVAIALKTTP---DLILCDVRMPRMDG 60
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 152
+ +L + ++ + IP I +S++D+ V + M GA DYL KP R+EL Q +
Sbjct: 61 YQVLEQLKQNPETRAIPFIFLSAKDARQDVRRGMYLGADDYLTKPFSRSELLEAIQSQLK 120
Query: 153 RQSSMVS 159
+++++ S
Sbjct: 121 KRAAIQS 127
>gi|371776078|ref|ZP_09482400.1| response regulator receiver protein [Anaerophaga sp. HS1]
Length = 121
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
MA VL+V+ +S R++V L+ Y V DG A + L GRP ID+I+T++ +P+
Sbjct: 1 MAKTVLIVDDSESIREVVNFTLQNEGYDVLVGVDGQDALQYLDGRP--IDIIITDLHMPN 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
+ G L+ V E + K+IP++ ++++ + + GA +++KP
Sbjct: 59 MDGLELIRKVREMDNYKHIPILFLTTESQAAKKMEAKQAGATGWIIKP 106
>gi|332531607|ref|ZP_08407504.1| response regulator receiver domain-containing protein [Hylemonella
gracilis ATCC 19624]
gi|332038970|gb|EGI75399.1| response regulator receiver domain-containing protein [Hylemonella
gracilis ATCC 19624]
Length = 130
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSY-RVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LR L+V+ + R+IV LL++S + DG+ A + L+ P D +++++++P++
Sbjct: 6 LRFLVVDDFSTMRRIVRNLLKESGFSEADEAEDGVVALQKLRALP--FDFVVSDINMPNM 63
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
+GF LL + E K+IPV+M++++ + +GAA Y+VKP + L H+
Sbjct: 64 NGFQLLAEIKRDEKLKHIPVLMVTAEARKEDIVLAAQQGAAGYIVKPFTKAVLEEKLHHI 123
Query: 151 WRR 153
++
Sbjct: 124 LKK 126
>gi|162463265|ref|NP_001104838.1| cytokinin response regulator1 [Zea mays]
gi|4512216|dbj|BAA75253.1| response regulator [Zea mays]
gi|6009895|dbj|BAA85112.1| response regulator 1 [Zea mays]
Length = 157
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPR-NIDLILTEVDLPSISG 92
VL V+ R ++ +LR S YRVTAV +A E+L ++ +I+T+ +P ++G
Sbjct: 39 VLAVDDSSVDRAVIARILRGSRYRVTAVESATRALELLALGLLPDVSMIITDYWMPGMTG 98
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNL 146
+ LL V E + IPV++MSS++ + + +C+ GA +L+KPVR ++ L
Sbjct: 99 YELLKCVKESAALRGIPVVIMSSENVPTRITRCLEEGAEGFLLKPVRPADVSRL 152
>gi|221065218|ref|ZP_03541323.1| CheA signal transduction histidine kinase [Comamonas testosteroni
KF-1]
gi|220710241|gb|EED65609.1| CheA signal transduction histidine kinase [Comamonas testosteroni
KF-1]
Length = 2232
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 70/119 (58%), Gaps = 8/119 (6%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKG-RPRNIDLILTEVDLPSISG 92
VL+V+ + R++ LL++ YRVT DGL+A E L+ RP L+L+++++P + G
Sbjct: 2092 VLVVDDSITVRRVTQRLLQREGYRVTLAADGLQAMERLQDERP---TLVLSDIEMPRMDG 2148
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMR--GAADYLVKPVRRNELRNLWQH 149
F LL + + + +PV+M++S+ ++ ++ M R GA YL KP EL L +H
Sbjct: 2149 FDLLRNIRADQTLEGLPVVMITSR--IAQKHREMARDLGANHYLGKPYSDEELLGLIRH 2205
>gi|262281167|ref|ZP_06058949.1| chemotaxis protein histidine kinase [Acinetobacter calcoaceticus
RUH2202]
gi|262257398|gb|EEY76134.1| chemotaxis protein histidine kinase [Acinetobacter calcoaceticus
RUH2202]
Length = 1501
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKG-RPRNIDLILTEVDLPS 89
R L++ DDS R++ T LL + Y V DG+ A E L+ +P DL+L ++++P
Sbjct: 1375 RRLIMIVDDSVTVRKVTTRLLERQGYDVVTAKDGIDAIEQLENIKP---DLMLLDIEMPR 1431
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ GF +L LV H++ +++PVIM++S+ + G Y+ KP + +L
Sbjct: 1432 MDGFEVLNLVRHHDLHQDMPVIMITSRTGEKHRERAFTLGVNQYMGKPFQEEDL 1485
>gi|448657370|ref|ZP_21682640.1| response regulator receiver protein [Haloarcula californiae ATCC
33799]
gi|445762912|gb|EMA14123.1| response regulator receiver protein [Haloarcula californiae ATCC
33799]
Length = 126
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI-DLILTEVDLP 88
M +++ E D++TR++V L + + V A DG WE L R + DL++ +V +P
Sbjct: 1 MTAEIVIAEDDETTREVVEFNLTDNGWDVVAFTDGDACWEHLGSRTSDPPDLVVLDVMMP 60
Query: 89 SISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ G ++L + +H+ ++PV+M++S++ + + + GA D++ KP EL
Sbjct: 61 ELDGISVLERIRDHDALVDLPVVMLTSRNREEDIVQALDAGADDFVAKPFSEAEL 115
>gi|410666854|ref|YP_006919225.1| alkaline phosphatase synthesis transcriptional regulatory protein
PhoP [Thermacetogenium phaeum DSM 12270]
gi|409104601|gb|AFV10726.1| alkaline phosphatase synthesis transcriptional regulatory protein
PhoP [Thermacetogenium phaeum DSM 12270]
Length = 230
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M R+L+V+ +D ++V+ L+K + V DG +AWE K R DL++ +V LP
Sbjct: 1 MPPRILVVDDEDVIVKLVSYNLKKEGFEVITAGDGQEAWE--KIRQEKPDLVILDVMLPG 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
+ GF+L L+ + ++ PV+M++++D + GA DYL KP EL +
Sbjct: 59 MDGFSLCRLLRQEKMMT--PVLMLTAKDEEIDRVLGLEIGADDYLTKPFSPRELIARVRA 116
Query: 150 VWRRQSSMVSGNETQDE 166
+ RR +G E Q E
Sbjct: 117 ILRRTGERRTGQEEQLE 133
>gi|392377746|ref|YP_004984905.1| putative chemotaxis regulator CheY [Azospirillum brasilense Sp245]
gi|356879227|emb|CCD00131.1| putative chemotaxis regulator CheY [Azospirillum brasilense Sp245]
Length = 144
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYR-VTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
LRVLL+E DD TR++++ LL+ R V DG+ A +L+ +DL + ++++P +
Sbjct: 18 LRVLLIEDDDFTRRLMSRLLQDLKVRHVWEASDGMAALGILRDHAEEVDLAICDLEMPRM 77
Query: 91 SGFALLTLVMEH--EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
SG LL + ++PVI++++ TV + + G + YLVKPV + +L
Sbjct: 78 SGLDLLHALRTATGNPLADLPVIVLTAHREADTVKRAIAYGISGYLVKPVSKADL 132
>gi|262198125|ref|YP_003269334.1| response regulator receiver protein [Haliangium ochraceum DSM
14365]
gi|262081472|gb|ACY17441.1| response regulator receiver protein [Haliangium ochraceum DSM
14365]
Length = 317
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 26 FLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEV 85
F M R+L+ + D ++VT +L+K Y V PDG +A+E P DL++T+V
Sbjct: 4 FTVLMPPRILVADDDAWILRMVTTVLKKRGYEVDTAPDGEQAYERALSNPP--DLLITDV 61
Query: 86 DLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+P++ G+ L+ + EH ++PVI +++ + GA DYL KP R EL
Sbjct: 62 MMPNVDGWTLVKQMREHPSLCDVPVIFLTALSADDDRIHGFRLGADDYLPKPFRFEEL 119
>gi|356495191|ref|XP_003516463.1| PREDICTED: protein transport Sec1a-like [Glycine max]
Length = 946
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 37/47 (78%)
Query: 161 NETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQ 207
N QDESV QQK+EAT+EN+ ASNHSSG +ACIQ E I+KGSD Q
Sbjct: 191 NGPQDESVAQQKVEATAENNVASNHSSGDVACIQRNMELIQKGSDAQ 237
>gi|171911993|ref|ZP_02927463.1| two component transcriptional regulator, winged helix family
protein [Verrucomicrobium spinosum DSM 4136]
Length = 235
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+ + ++ R++V LR++ Y DGL+ + + R R D I+ +V +P GF
Sbjct: 7 ILIADDEEDVRELVGMNLRRAGYDTVEAADGLQT--LAQVRRRKPDAIVLDVMMPGRDGF 64
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
+ + E E ++IPVIM++++ + RGA DYL KP EL Q + RR
Sbjct: 65 GVCQELREDESTRHIPVIMLTAKGQTQDRIAGLERGADDYLSKPFSPKELVLRVQALLRR 124
Query: 154 QSSMVSGNETQD 165
+++ SG+E ++
Sbjct: 125 AATVGSGSELKE 136
>gi|414589073|tpg|DAA39644.1| TPA: hypothetical protein ZEAMMB73_370141 [Zea mays]
gi|414872989|tpg|DAA51546.1| TPA: hypothetical protein ZEAMMB73_745932 [Zea mays]
Length = 576
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Query: 113 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ 154
MS++D VS V KC+ GAA+YLVKP+R NEL NLW HVWRR+
Sbjct: 1 MSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVWRRR 42
>gi|85817687|gb|EAQ38861.1| two-component system response regulator [Dokdonia donghaensis
MED134]
Length = 348
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 33 RVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISG 92
RVL++E D + R+ LL S+Y VTA P+G E K P D+I+ ++ +P + G
Sbjct: 3 RVLIIEDDAALRENTAELLELSNYDVTAAPNGRVGIEYAKSSPP--DVIVCDIMMPEVDG 60
Query: 93 FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +L + +IP I +S++ + K M GA DYL KP EL
Sbjct: 61 YGVLEALSSDTTTSHIPFIFLSAKTEHKEIRKGMDMGADDYLTKPFEEEEL 111
>gi|406946398|gb|EKD77619.1| hypothetical protein ACD_42C00267G0001 [uncultured bacterium]
Length = 226
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 31/248 (12%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+RVLLVE D+ + + L+ + V V DG A+E L + N D+++ ++ LP +S
Sbjct: 1 MRVLLVEDDELLGDGIYSGLKHYGHTVDWVKDGKSAYEALSRKQENFDVVVLDLGLPKMS 60
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVW 151
G +L + E I +PV++++++D+V + + + GA DYL+KP +EL + +
Sbjct: 61 GLDILKRIREKNIP--VPVLILTAKDTVESRVQGLDAGADDYLLKPFDLDELCARMRALQ 118
Query: 152 RR-----QSSMVSGNETQDESVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDE 206
RR Q +V G+ + D + + KGE I E
Sbjct: 119 RRSKSRAQPVLVHGDISIDPAA----------------------HLVTLKGESITLSRRE 156
Query: 207 QSSCTKPDFEAESAHVEDMPDLSRQLWGKSLQ-NDVKMQNHEARVNYGQKSLVPVTEAQG 265
+ K A D + + WG+++ N +++ H R +G K L+ G
Sbjct: 157 FTLLQKLLENAGRVISRDQLNQTLYGWGENIDSNALEVHIHNLRKRFGTK-LIRTIRGVG 215
Query: 266 SEVAACKE 273
V A +E
Sbjct: 216 YMVKAIQE 223
>gi|320353926|ref|YP_004195265.1| response regulator receiver protein [Desulfobulbus propionicus DSM
2032]
gi|320122428|gb|ADW17974.1| response regulator receiver protein [Desulfobulbus propionicus DSM
2032]
Length = 191
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS- 89
++ +L+ + D R++ L K Y VT DG +A +L RP D+I+T++ +P
Sbjct: 3 SMTILVADDDPVIRKLFEKRLGKEGYTVTIAADGAEAARLLDTRP--FDVIITDLVMPGK 60
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
I G LL L E + I VI++++ S+ T M +GA DYL KP+ +EL +
Sbjct: 61 IGGIELLKLAKEKSV--EIEVIVITAHSSIDTAVDAMKKGAVDYLEKPINFDELFLRLEK 118
Query: 150 VWRRQSSM 157
+ R++ M
Sbjct: 119 ISERKALM 126
>gi|195656043|gb|ACG47489.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 232
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLR----KSSYRVTAVPDGLKAWEVLK----GRPRNIDLILT 83
+RVL+V+ R++ LL S+ V AV KA E L G + +D++LT
Sbjct: 14 MRVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIAVDSARKAMEFLGLKDGGEEQAVDMVLT 73
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + + IPV++MSS+D + +C+ GA D++VKP++ ++
Sbjct: 74 DYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKPLQSKDV 133
Query: 144 RNL 146
+ L
Sbjct: 134 QRL 136
>gi|187736215|ref|YP_001878327.1| two component transcriptional regulator, winged helix family
[Akkermansia muciniphila ATCC BAA-835]
gi|187426267|gb|ACD05546.1| two component transcriptional regulator, winged helix family
[Akkermansia muciniphila ATCC BAA-835]
Length = 234
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 31 ALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
A +L+ E DDS R +T +L S Y V A+ +GL A + R RN DL L +V +P
Sbjct: 5 AYTILIAEDDDSIRHALTDVLTASGYEVLALEEGLAAIHAV--RERNFDLALLDVAMPGA 62
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 150
GF +L ++ E PVIM++++ + + GA DY+VKP EL + V
Sbjct: 63 DGFQVLQVMSEER--PGTPVIMLTARGEEEDRVQGLKLGADDYIVKPFSIRELLARIEAV 120
Query: 151 WRR 153
RR
Sbjct: 121 LRR 123
>gi|224126559|ref|XP_002329584.1| pseudo response regulator [Populus trichocarpa]
gi|222870293|gb|EEF07424.1| pseudo response regulator [Populus trichocarpa]
Length = 420
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
++ W+ F + L VLL++ D+S+ + + L Y V + +A + P +
Sbjct: 8 LSAWKDFPK--GLSVLLLDEDNSSAAEIKSKLEALDYIVYTFCNENEALLAISNEPGSFH 65
Query: 80 LILTEVDLPSISG-FALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
+ + EV + +G F L E K++P IM S+ ++T+ KC+ GA ++L KP+
Sbjct: 66 VAIVEVSTSNSNGSFKFL------ETAKDLPTIMTSNIHCLNTMMKCIALGAVEFLRKPL 119
Query: 139 RRNELRNLWQHVWRRQSSMVSGNETQDESV 168
++LRN+WQHV + + +G Q ES+
Sbjct: 120 SEDKLRNIWQHVVHK--AFNAGGSVQSESL 147
>gi|116750232|ref|YP_846919.1| two component sigma54 specific Fis family transcriptional regulator
[Syntrophobacter fumaroxidans MPOB]
gi|116699296|gb|ABK18484.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Syntrophobacter fumaroxidans MPOB]
Length = 450
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
L+VL+V+ + R+ + RKS Y + G A E++ G+ + DL+ ++ +P +S
Sbjct: 5 LKVLVVDDEKIVRESLVEWFRKSGYEADSADGGRSALEMVAGK--DYDLVFLDIKMPDVS 62
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
GF +L + C V+M+++ SV T M RGA+DYL+KP +EL
Sbjct: 63 GFEVLDRIKAD--CPYTLVVMITAYGSVETAVDAMKRGASDYLMKPFDPDEL 112
>gi|15242000|ref|NP_201097.1| two-component response regulator ARR6 [Arabidopsis thaliana]
gi|51316124|sp|Q9ZWS6.2|ARR6_ARATH RecName: Full=Two-component response regulator ARR6
gi|3953601|dbj|BAA34728.1| response regulator 6 [Arabidopsis thaliana]
gi|10177470|dbj|BAB10861.1| response regulator 6 [Arabidopsis thaliana]
gi|28466913|gb|AAO44065.1| At5g62920 [Arabidopsis thaliana]
gi|110735683|dbj|BAE99822.1| response regulator 6 [Arabidopsis thaliana]
gi|332010291|gb|AED97674.1| two-component response regulator ARR6 [Arabidopsis thaliana]
Length = 186
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLK---------GRPRNIDLIL 82
L VL V+ R+ + LLR SS +VT V +A + L ++LI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 83 TEVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNE 142
T+ +P ++G+ LL + E + +PV++MSS++ + + +C+ GA D+L+KPV+ ++
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
Query: 143 LRNLWQHVWR 152
++ L + +
Sbjct: 145 VKRLRDSLMK 154
>gi|443479083|ref|ZP_21068740.1| response regulator receiver protein [Pseudanabaena biceps PCC 7429]
gi|443015498|gb|ELS30420.1| response regulator receiver protein [Pseudanabaena biceps PCC 7429]
Length = 240
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 68/107 (63%), Gaps = 4/107 (3%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI-DLILTEVDLPSI 90
+VL+V+ ++ R ++ L + ++++ +G +A E+ + +N+ DL+L ++ +P +
Sbjct: 6 FQVLIVDDNEINRDMLARRLHRRDFQISMAVNGREAIEMAQ---KNLYDLVLLDIMMPEL 62
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
G+A+LT + + ++IPVIM+S+ + + +V KCM GA DYL KP
Sbjct: 63 DGYAVLTYLKKDSRLRDIPVIMISAIEEMGSVMKCMEIGADDYLTKP 109
>gi|224034623|gb|ACN36387.1| unknown [Zea mays]
gi|413918403|gb|AFW58335.1| RR1-Corn type-A response regulator [Zea mays]
Length = 232
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 32 LRVLLVEADDSTRQIVTALLR----KSSYRVTAVPDGLKAWEVLK----GRPRNIDLILT 83
+RVL+V+ R++ LL S+ V AV KA E L G + +D++LT
Sbjct: 14 MRVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIAVDSARKAMEFLGLKDGGEEQAVDMVLT 73
Query: 84 EVDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ +P ++G+ LL + + IPV++MSS+D + +C+ GA D++VKP++ ++
Sbjct: 74 DYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDFIVKPLQSKDV 133
Query: 144 RNL 146
+ L
Sbjct: 134 QRL 136
>gi|427714607|ref|YP_007063231.1| chemotaxis protein histidine kinase-like protein [Synechococcus sp.
PCC 6312]
gi|427378736|gb|AFY62688.1| chemotaxis protein histidine kinase-like protein [Synechococcus sp.
PCC 6312]
Length = 902
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSI 90
+V L+ DDS R+++ +L ++ Y V + DG +AWE L I LI+++V++P +
Sbjct: 774 QVTLMIVDDSVAVRRLLERVLTQAGYGVISCRDGQEAWEQLNRISDPIRLIISDVEMPRM 833
Query: 91 SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN 145
GFALL V H + +PV M++S+ YK GA Y VKP + +L N
Sbjct: 834 DGFALLQEVRHHPQWEALPVAMLTSRSGDQHRYKAQQLGANAYFVKPFQPVDLVN 888
>gi|408399309|gb|EKJ78418.1| hypothetical protein FPSE_01392 [Fusarium pseudograminearum CS3096]
Length = 1368
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 28 QRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNI----DLILT 83
+R + VL+VE + ++I T + + ++VTA +G +A E L G + I D+IL
Sbjct: 1099 ERAKIHVLVVEDNPINQKIATKTIGRLGFQVTAAWNGKEALEYLAGVQKGINQKPDIILM 1158
Query: 84 EVDLPSISGFALLTLVMEH----EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVR 139
+V +P I G+ L+ H + +++P++ M++ KC G DYL KPVR
Sbjct: 1159 DVQMPIIDGYKCTHLLRHHMPYKPLVQDVPIVAMTASAIQGDREKCTKAGMDDYLAKPVR 1218
Query: 140 RNELRNL---WQHVWRR 153
L + W H RR
Sbjct: 1219 GVILEKMLLRWCHARRR 1235
>gi|295100285|emb|CBK97830.1| diguanylate cyclase (GGDEF) domain [Faecalibacterium prausnitzii
L2-6]
Length = 647
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 25 TFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTE 84
T L R + + +L+ D + +++ A + + +R+ +G E L+ P ++ L+L +
Sbjct: 285 TLLPRQSRQQILIADDSAMNRMLLAEILGTDFRILEASNGEDCLEQLRHNPGDVALVLLD 344
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELR 144
+++P + GF +L+ + ++IPVIM+SS DS + + RG +DY+ +P + R
Sbjct: 345 INMPVLDGFDVLSAMNRDHSIEDIPVIMISSDDSKDIIRRAFERGVSDYISRPF---DAR 401
Query: 145 NLWQHVW---------RRQSSMVSGNETQDE 166
+++ + RR MVS + E
Sbjct: 402 TVYRRAFNTIRLYAKQRRLVRMVSAQTRKQE 432
>gi|294651360|ref|ZP_06728679.1| chemotactic signal transduction system component [Acinetobacter
haemolyticus ATCC 19194]
gi|292822762|gb|EFF81646.1| chemotactic signal transduction system component [Acinetobacter
haemolyticus ATCC 19194]
Length = 1711
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 6/119 (5%)
Query: 28 QRMALRVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKG-RPRNIDLILTE 84
QR R L++ DDS R++ + LL + Y V DG+ A E L+ +P DL+L +
Sbjct: 1585 QRYDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAMEQLETVKP---DLMLLD 1641
Query: 85 VDLPSISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+++P + GF + LV HEI +++P+IM++S+ + + G + Y+ KP + L
Sbjct: 1642 IEMPRMDGFEVTNLVRHHEIHRDLPIIMITSRTGEKHRERALSLGVSQYMGKPFQEETL 1700
>gi|42523020|ref|NP_968400.1| regulator protein pilR [Bdellovibrio bacteriovorus HD100]
gi|39575225|emb|CAE79393.1| regulator protein pilR [Bdellovibrio bacteriovorus HD100]
Length = 468
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
Query: 30 MALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPS 89
M R+L+V+ ++S R+ + +L+K Y +T DG KA ++L + D+I++++ +P
Sbjct: 1 MKSRILVVDDEESIREFLEIMLKKEGYEITLAEDGQKAKDLLA--KKTFDMIISDLQMPH 58
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQH 149
++G LL V E + +++++ + T + M GA DYL KP + +E+R Q+
Sbjct: 59 VTGIELLKHVKES--YPDTVFMLITAFGTTETAVEAMKMGAYDYLTKPFKIDEVRLNIQN 116
Query: 150 VWRRQSSMVSGNETQDESV 168
R ++ V + E V
Sbjct: 117 ALRSRNLEVENRSLKKELV 135
>gi|425470909|ref|ZP_18849769.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC 9701]
gi|389883344|emb|CCI36287.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC 9701]
Length = 1037
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ R+++ L K+ YR+ DGL+AWE L+ DLIL ++ +P ++G
Sbjct: 908 VLIVDDSLIVREMLMISLVKAGYRIEQAQDGLEAWEKLQAG-LACDLILCDIQMPRLNGL 966
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKP 137
LL+ + E E + IPV M++S+ + + +GA Y VKP
Sbjct: 967 ELLSRLQEDEQLQGIPVAMITSRGTKKMQHLVAAKGAKGYFVKP 1010
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
VL+V+ + R++++ K+ YRV DG +AWE L+G D++ ++++P ++G
Sbjct: 752 VLIVDDSITVRELLSLSFIKAGYRVEQARDGQEAWEKLRGG-LPCDIVFCDIEMPRMNGL 810
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLW 147
LL+ + + IPV +++S+ S GA+ Y KP +L LW
Sbjct: 811 ELLSNLQKDPRLAAIPVALLTSRGSERHRQVAAKLGASGYFTKPYTERDL--LW 862
>gi|356565422|ref|XP_003550939.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 576
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 20 IAKWETFLQRMALRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNID 79
+ +W+ F + L+VLL E D+ + + A L Y V+ D A V+ +
Sbjct: 31 LQEWKDFPK--GLKVLLHERDNISAAEIRAKLEAMDYNVSTFCDENDALSVISSGLESFH 88
Query: 80 LILTEVDLPSI-SGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPV 138
+ + EV S GF L E K++P IM S+ ++T+ KC+ GA ++L KP+
Sbjct: 89 IAIVEVSSSSAQGGFKFL------ENAKDLPTIMTSNNHCLNTMMKCIALGAVEFLSKPL 142
Query: 139 RRNELRNLWQHV 150
++LRN+WQHV
Sbjct: 143 SEDKLRNIWQHV 154
>gi|124003289|ref|ZP_01688139.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
gi|123991387|gb|EAY30818.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
Length = 1269
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 32 LRVLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSIS 91
+++L+V+ + Q++ L +Y +T DGLKA +++K D+IL +V +P +S
Sbjct: 885 VKILVVDDEPVNLQVLENHLSIQNYNITQASDGLKALKIIKESKEPFDIILLDVMMPKMS 944
Query: 92 GFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRN-LWQHV 150
G+ + + E +PV+M+++++ + + GA DYL KP + EL + + HV
Sbjct: 945 GYEVCRTIRERFPLVELPVLMLTAKNQPKDIVEGFDAGANDYLTKPFSKVELLSRIKTHV 1004
Query: 151 WRRQSS--MVSGNETQDE--SVGQQKIEATSE 178
+ +S + + NE E + +QKIE +E
Sbjct: 1005 LLKLTSENLQTANEKLQEYNATLEQKIEERTE 1036
>gi|301347333|ref|ZP_07228074.1| ChpA [Acinetobacter baumannii AB056]
Length = 1099
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKG-RPRNIDLILTEVDLPS 89
R L++ DDS R++ + LL + Y V DG+ A E L+ +P DL+L ++++P
Sbjct: 972 RRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKP---DLMLLDIEMPR 1028
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ GF +L LV H++ + +P+IM++S+ + + G + Y+ KP + EL
Sbjct: 1029 MDGFEVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFLLGVSQYMGKPFQEEEL 1082
>gi|169794846|ref|YP_001712639.1| sensor histidine kinase/response regulator; protein of chemotactic
signal transduction system (ChA-like) [Acinetobacter
baumannii AYE]
gi|213157827|ref|YP_002320625.1| type IV pilus hybrid sensor kinase/response regulator PilL
[Acinetobacter baumannii AB0057]
gi|215482393|ref|YP_002324575.1| ChpA [Acinetobacter baumannii AB307-0294]
gi|301512075|ref|ZP_07237312.1| ChpA [Acinetobacter baumannii AB058]
gi|301596435|ref|ZP_07241443.1| ChpA [Acinetobacter baumannii AB059]
gi|332852300|ref|ZP_08434105.1| Hpt domain protein [Acinetobacter baumannii 6013150]
gi|332870523|ref|ZP_08439287.1| Hpt domain protein [Acinetobacter baumannii 6013113]
gi|417571824|ref|ZP_12222678.1| Hpt domain protein [Acinetobacter baumannii Canada BC-5]
gi|421623696|ref|ZP_16064579.1| Hpt domain protein [Acinetobacter baumannii OIFC074]
gi|421644694|ref|ZP_16085170.1| Hpt domain protein [Acinetobacter baumannii IS-235]
gi|421648866|ref|ZP_16089264.1| Hpt domain protein [Acinetobacter baumannii IS-251]
gi|421659479|ref|ZP_16099697.1| Hpt domain protein [Acinetobacter baumannii Naval-83]
gi|421701144|ref|ZP_16140651.1| Hpt domain protein [Acinetobacter baumannii IS-58]
gi|421794711|ref|ZP_16230803.1| Hpt domain protein [Acinetobacter baumannii Naval-21]
gi|421800578|ref|ZP_16236552.1| Hpt domain protein [Acinetobacter baumannii Canada BC1]
gi|169147773|emb|CAM85636.1| putative sensor histidine kinase/response regulator; putative protein
of chemotactic signal transduction system (ChA-like)
[Acinetobacter baumannii AYE]
gi|213056987|gb|ACJ41889.1| type IV pilus hybrid sensor kinase/response regulator PilL
[Acinetobacter baumannii AB0057]
gi|213986150|gb|ACJ56449.1| ChpA [Acinetobacter baumannii AB307-0294]
gi|332729430|gb|EGJ60770.1| Hpt domain protein [Acinetobacter baumannii 6013150]
gi|332732260|gb|EGJ63528.1| Hpt domain protein [Acinetobacter baumannii 6013113]
gi|400207392|gb|EJO38362.1| Hpt domain protein [Acinetobacter baumannii Canada BC-5]
gi|404568022|gb|EKA73133.1| Hpt domain protein [Acinetobacter baumannii IS-58]
gi|408504582|gb|EKK06326.1| Hpt domain protein [Acinetobacter baumannii IS-235]
gi|408514824|gb|EKK16426.1| Hpt domain protein [Acinetobacter baumannii IS-251]
gi|408692720|gb|EKL38335.1| Hpt domain protein [Acinetobacter baumannii OIFC074]
gi|408707242|gb|EKL52530.1| Hpt domain protein [Acinetobacter baumannii Naval-83]
gi|410403067|gb|EKP55168.1| Hpt domain protein [Acinetobacter baumannii Naval-21]
gi|410407281|gb|EKP59268.1| Hpt domain protein [Acinetobacter baumannii Canada BC1]
Length = 1506
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
Query: 33 RVLLVEADDST--RQIVTALLRKSSYRVTAVPDGLKAWEVLKG-RPRNIDLILTEVDLPS 89
R L++ DDS R++ + LL + Y V DG+ A E L+ +P DL+L ++++P
Sbjct: 1379 RRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKP---DLMLLDIEMPR 1435
Query: 90 ISGFALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
+ GF +L LV H++ + +P+IM++S+ + + G + Y+ KP + EL
Sbjct: 1436 MDGFEVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFLLGVSQYMGKPFQEEEL 1489
>gi|162450832|ref|YP_001613199.1| sigma-54 dependent DNA-binding response regulator [Sorangium
cellulosum So ce56]
gi|161161414|emb|CAN92719.1| sigma-54 dependent DNA-binding response regulator [Sorangium
cellulosum So ce56]
Length = 481
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+V+ + + R++++A L + Y V DG + LK +IDL++T++ +P + G
Sbjct: 8 ILVVDDEANLRRVLSAQLSRDGYEVHTAEDGEEGLAFLK--EHHIDLVITDLRMPKVDGM 65
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 153
LL + + + PV+++++ +V + + GA DY+ KP +NE+R + + R
Sbjct: 66 DLLRAALRDDPSR--PVVLLTAHGTVDNAVEALKTGAFDYITKPFDQNEVRVVVKKALRT 123
Query: 154 QSSMVSGNETQDESVGQQK 172
+ + S + T+D S Q +
Sbjct: 124 R-DLASADATRDVSAAQPR 141
>gi|326204762|ref|ZP_08194617.1| two component transcriptional regulator, winged helix family
[Clostridium papyrosolvens DSM 2782]
gi|325985133|gb|EGD45974.1| two component transcriptional regulator, winged helix family
[Clostridium papyrosolvens DSM 2782]
Length = 223
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Query: 34 VLLVEADDSTRQIVTALLRKSSYRVTAVPDGLKAWEVLKGRPRNIDLILTEVDLPSISGF 93
+L+VE D S ++ +L K Y DGL+AW++++ + IDL+++++ +P++ G+
Sbjct: 4 ILVVEDDQSLSKLFCTVLAKHGYSYYVANDGLEAWDIIE--KQYIDLVISDIMMPNMDGY 61
Query: 94 ALLTLVMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPVRRNEL 143
L+ + ++ N+PV+M++++D+ + G DY++KPV NE+
Sbjct: 62 ELVKSLRDN--GYNMPVLMITAKDTFEDMKNGFRVGTDDYMIKPVNVNEM 109
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.126 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,839,682,321
Number of Sequences: 23463169
Number of extensions: 310270317
Number of successful extensions: 817785
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13871
Number of HSP's successfully gapped in prelim test: 60759
Number of HSP's that attempted gapping in prelim test: 763588
Number of HSP's gapped (non-prelim): 82019
length of query: 527
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 380
effective length of database: 8,910,109,524
effective search space: 3385841619120
effective search space used: 3385841619120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 79 (35.0 bits)