Query 009735
Match_columns 527
No_of_seqs 148 out of 187
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 11:50:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009735.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009735hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s9f_A Tryparedoxin; thioredox 99.5 6.8E-14 2.3E-18 126.9 14.4 125 154-295 36-164 (165)
2 1i5g_A Tryparedoxin II; electr 99.5 1.3E-13 4.3E-18 120.3 14.8 125 154-294 15-143 (144)
3 1o73_A Tryparedoxin; electron 99.5 2.9E-13 1E-17 117.4 15.1 125 153-294 15-143 (144)
4 1o8x_A Tryparedoxin, TRYX, TXN 99.5 1.7E-13 6E-18 119.9 13.2 125 154-295 16-144 (146)
5 2lus_A Thioredoxion; CR-Trp16, 98.9 8.2E-13 2.8E-17 113.9 0.0 115 155-285 12-132 (143)
6 2lrt_A Uncharacterized protein 99.2 9.8E-11 3.3E-15 104.1 10.2 107 154-278 22-130 (152)
7 3eur_A Uncharacterized protein 99.1 6.1E-11 2.1E-15 103.2 7.7 106 154-278 18-130 (142)
8 4fo5_A Thioredoxin-like protei 99.1 7.4E-11 2.5E-15 102.8 7.6 107 154-278 19-130 (143)
9 2lrn_A Thiol:disulfide interch 99.1 7.3E-10 2.5E-14 97.4 13.1 109 154-278 16-126 (152)
10 3fw2_A Thiol-disulfide oxidore 99.1 8.1E-10 2.8E-14 96.9 12.3 108 154-278 18-133 (150)
11 3ewl_A Uncharacterized conserv 99.1 2.2E-10 7.6E-15 98.9 7.3 104 154-276 14-124 (142)
12 3fkf_A Thiol-disulfide oxidore 99.0 2.4E-09 8.1E-14 92.2 11.1 108 154-278 18-131 (148)
13 3raz_A Thioredoxin-related pro 99.0 2.8E-09 9.5E-14 93.6 11.1 105 155-276 12-120 (151)
14 2ggt_A SCO1 protein homolog, m 99.0 9.9E-09 3.4E-13 90.4 14.5 114 155-277 11-142 (164)
15 3gl3_A Putative thiol:disulfid 99.0 1.9E-09 6.6E-14 93.8 9.0 101 156-277 17-121 (152)
16 2lja_A Putative thiol-disulfid 98.9 1.6E-09 5.4E-14 94.4 8.3 106 154-277 17-124 (152)
17 3hcz_A Possible thiol-disulfid 98.9 3.9E-10 1.4E-14 97.1 4.1 107 154-277 18-127 (148)
18 2f9s_A Thiol-disulfide oxidore 98.9 2.4E-09 8E-14 93.6 7.9 105 154-277 13-119 (151)
19 2rli_A SCO2 protein homolog, m 98.9 1.9E-08 6.3E-13 89.5 13.1 114 155-277 14-145 (171)
20 3hdc_A Thioredoxin family prot 98.9 8E-09 2.7E-13 91.5 10.1 119 154-294 28-155 (158)
21 4evm_A Thioredoxin family prot 98.9 2.2E-08 7.5E-13 83.9 11.8 109 155-277 10-120 (138)
22 3eyt_A Uncharacterized protein 98.8 1.1E-08 3.8E-13 89.8 10.1 113 156-277 17-133 (158)
23 1lu4_A Soluble secreted antige 98.8 5.6E-09 1.9E-13 88.6 7.6 101 154-275 11-113 (136)
24 3erw_A Sporulation thiol-disul 98.8 9.1E-09 3.1E-13 87.9 8.7 104 154-276 22-129 (145)
25 3or5_A Thiol:disulfide interch 98.8 1.6E-08 5.4E-13 89.0 10.0 108 154-277 21-132 (165)
26 3kcm_A Thioredoxin family prot 98.8 1.5E-08 5E-13 88.4 9.2 106 154-277 15-122 (154)
27 1zzo_A RV1677; thioredoxin fol 98.8 2.6E-08 8.9E-13 84.0 10.4 98 155-275 13-115 (136)
28 2v1m_A Glutathione peroxidase; 98.8 7E-08 2.4E-12 85.4 13.5 117 154-277 18-148 (169)
29 3ha9_A Uncharacterized thiored 98.8 9.8E-09 3.3E-13 91.2 7.9 105 155-276 25-145 (165)
30 2b5x_A YKUV protein, TRXY; thi 98.8 4.6E-08 1.6E-12 83.8 11.7 117 146-277 4-126 (148)
31 3lor_A Thiol-disulfide isomera 98.8 1.8E-08 6.1E-13 88.4 9.2 115 155-277 18-136 (160)
32 2p5q_A Glutathione peroxidase 98.8 7.1E-08 2.4E-12 85.4 12.7 117 154-277 19-149 (170)
33 3drn_A Peroxiredoxin, bacterio 98.8 3.7E-08 1.3E-12 88.0 11.0 104 154-277 15-126 (161)
34 1xzo_A BSSCO, hypothetical pro 98.8 6E-08 2.1E-12 86.4 12.2 114 154-277 20-151 (174)
35 2h30_A Thioredoxin, peptide me 98.8 4.9E-09 1.7E-13 92.4 4.9 111 152-277 23-137 (164)
36 2b7k_A SCO1 protein; metalloch 98.8 4.8E-08 1.6E-12 91.2 11.9 112 154-277 28-160 (200)
37 3ztl_A Thioredoxin peroxidase; 98.8 2.8E-08 9.7E-13 94.6 10.3 113 146-277 43-175 (222)
38 2vup_A Glutathione peroxidase- 98.8 5.6E-08 1.9E-12 89.5 11.9 116 155-277 36-166 (190)
39 3dwv_A Glutathione peroxidase- 98.7 2.7E-08 9.2E-13 91.6 9.5 116 155-277 34-164 (187)
40 3u5r_E Uncharacterized protein 98.7 1.6E-08 5.5E-13 95.8 7.8 110 154-277 45-159 (218)
41 3me7_A Putative uncharacterize 98.7 7E-08 2.4E-12 87.8 11.8 114 154-277 15-142 (170)
42 3lwa_A Secreted thiol-disulfid 98.7 6E-08 2.1E-12 87.9 11.2 113 156-277 48-162 (183)
43 1jfu_A Thiol:disulfide interch 98.7 1E-07 3.5E-12 86.3 12.7 109 154-277 47-159 (186)
44 3gkn_A Bacterioferritin comigr 98.7 6.4E-08 2.2E-12 85.9 10.9 103 154-276 22-139 (163)
45 2ls5_A Uncharacterized protein 98.2 1.5E-09 5.3E-14 95.8 0.0 105 155-277 21-130 (159)
46 2bmx_A Alkyl hydroperoxidase C 98.7 5.6E-08 1.9E-12 89.8 10.1 101 158-277 36-147 (195)
47 1xvw_A Hypothetical protein RV 98.7 2E-08 6.9E-13 88.7 6.7 106 154-277 22-137 (160)
48 2cvb_A Probable thiol-disulfid 98.7 3.6E-08 1.2E-12 89.7 8.1 108 154-277 20-132 (188)
49 3cmi_A Peroxiredoxin HYR1; thi 98.7 1E-07 3.5E-12 85.8 10.9 117 155-277 20-149 (171)
50 1we0_A Alkyl hydroperoxide red 98.7 5.7E-08 2E-12 88.8 9.3 100 159-277 23-134 (187)
51 2obi_A PHGPX, GPX-4, phospholi 98.7 1.5E-07 5.1E-12 85.8 12.0 116 154-277 34-165 (183)
52 2l5o_A Putative thioredoxin; s 98.7 1.7E-07 5.9E-12 81.5 11.7 104 155-276 16-121 (153)
53 3ia1_A THIO-disulfide isomeras 98.6 1.3E-07 4.4E-12 82.6 10.1 106 154-278 18-126 (154)
54 3kij_A Probable glutathione pe 98.6 4.5E-07 1.6E-11 82.5 13.8 116 154-277 25-151 (180)
55 2k6v_A Putative cytochrome C o 98.6 8.2E-08 2.8E-12 85.1 8.4 112 155-278 24-153 (172)
56 1zof_A Alkyl hydroperoxide-red 98.6 3.3E-08 1.1E-12 91.4 5.8 109 156-278 18-139 (198)
57 2gs3_A PHGPX, GPX-4, phospholi 98.6 3.4E-07 1.2E-11 83.9 12.4 117 154-277 36-167 (185)
58 3kh7_A Thiol:disulfide interch 98.6 5.9E-08 2E-12 88.5 7.1 98 158-277 49-148 (176)
59 2h01_A 2-Cys peroxiredoxin; th 98.6 1.1E-07 3.9E-12 87.4 9.0 104 156-278 17-137 (192)
60 2c0d_A Thioredoxin peroxidase 98.6 1.6E-07 5.6E-12 90.1 9.8 104 156-278 42-162 (221)
61 1qmv_A Human thioredoxin perox 98.6 2.3E-07 7.8E-12 85.9 10.5 101 158-277 25-140 (197)
62 2ywi_A Hypothetical conserved 98.6 4E-08 1.4E-12 89.6 5.2 109 154-277 32-146 (196)
63 1uul_A Tryparedoxin peroxidase 98.6 2.6E-07 8.9E-12 86.0 10.6 101 158-277 27-142 (202)
64 1zye_A Thioredoxin-dependent p 98.6 2.5E-07 8.7E-12 88.0 10.4 105 154-277 43-162 (220)
65 4hde_A SCO1/SENC family lipopr 98.5 6E-07 2.1E-11 82.0 11.6 115 154-276 19-148 (170)
66 2pn8_A Peroxiredoxin-4; thiore 98.5 2.8E-07 9.7E-12 87.3 9.7 104 156-278 37-155 (211)
67 3idv_A Protein disulfide-isome 98.5 6.2E-07 2.1E-11 83.9 11.9 153 165-369 30-193 (241)
68 3qpm_A Peroxiredoxin; oxidored 98.5 4.5E-07 1.5E-11 88.1 11.1 113 146-277 51-183 (240)
69 3ixr_A Bacterioferritin comigr 98.5 4.8E-07 1.7E-11 82.9 10.6 103 155-277 39-156 (179)
70 2i81_A 2-Cys peroxiredoxin; st 98.5 3.4E-07 1.2E-11 86.9 9.8 103 156-277 38-157 (213)
71 2f8a_A Glutathione peroxidase 98.5 6.9E-07 2.3E-11 84.6 11.7 130 141-277 18-188 (208)
72 2p31_A CL683, glutathione pero 98.5 8.6E-07 3E-11 80.9 11.6 112 154-277 36-162 (181)
73 1kng_A Thiol:disulfide interch 98.5 1.7E-07 5.8E-12 81.6 5.8 99 158-277 33-133 (156)
74 2hyx_A Protein DIPZ; thioredox 98.4 2.4E-07 8.1E-12 95.6 7.4 117 147-277 55-180 (352)
75 2b1k_A Thiol:disulfide interch 98.4 2.6E-07 9E-12 82.1 6.8 100 156-277 39-141 (168)
76 2jsy_A Probable thiol peroxida 98.4 1.9E-07 6.3E-12 83.4 5.1 103 154-278 31-144 (167)
77 1psq_A Probable thiol peroxida 98.4 1.6E-06 5.6E-11 77.6 10.9 103 154-278 29-142 (163)
78 1n8j_A AHPC, alkyl hydroperoxi 98.4 1.2E-06 4.1E-11 80.9 9.8 102 158-278 21-134 (186)
79 3p7x_A Probable thiol peroxida 98.4 1.4E-06 4.7E-11 78.3 9.4 102 154-277 33-144 (166)
80 1xvq_A Thiol peroxidase; thior 98.4 5.1E-07 1.7E-11 82.2 6.6 102 154-278 31-145 (175)
81 4g2e_A Peroxiredoxin; redox pr 98.3 6.7E-07 2.3E-11 80.4 6.8 104 154-277 17-134 (157)
82 2a4v_A Peroxiredoxin DOT5; yea 98.3 2.3E-06 7.9E-11 76.0 10.0 103 154-278 20-133 (159)
83 2i3y_A Epididymal secretory gl 98.3 5.4E-06 1.8E-10 79.6 12.8 116 155-277 43-192 (215)
84 2yzh_A Probable thiol peroxida 98.3 2.3E-06 7.8E-11 77.1 9.3 102 154-278 34-149 (171)
85 3tjj_A Peroxiredoxin-4; thiore 98.3 2.1E-06 7.2E-11 84.4 9.6 113 146-277 65-197 (254)
86 2r37_A Glutathione peroxidase 98.3 6.9E-06 2.3E-10 78.1 12.7 117 155-277 25-174 (207)
87 3hxs_A Thioredoxin, TRXP; elec 98.2 3.9E-06 1.3E-10 72.5 9.4 80 155-276 39-120 (141)
88 3zrd_A Thiol peroxidase; oxido 98.2 2.4E-06 8.4E-11 80.2 8.6 104 154-278 65-181 (200)
89 1q98_A Thiol peroxidase, TPX; 98.2 4E-06 1.4E-10 75.3 8.9 104 154-278 30-146 (165)
90 1tp9_A Peroxiredoxin, PRX D (t 98.1 1.4E-05 4.9E-10 71.8 10.9 112 146-278 7-143 (162)
91 1nm3_A Protein HI0572; hybrid, 98.1 6E-05 2E-09 71.8 15.9 171 156-373 19-211 (241)
92 1z6n_A Hypothetical protein PA 98.1 4.2E-06 1.4E-10 77.4 7.3 75 162-276 49-125 (167)
93 2l57_A Uncharacterized protein 98.1 1.1E-05 3.7E-10 68.6 8.7 75 162-276 21-97 (126)
94 3ul3_B Thioredoxin, thioredoxi 98.1 1.7E-05 5.7E-10 68.0 9.5 85 149-276 24-110 (128)
95 2wfc_A Peroxiredoxin 5, PRDX5; 98.0 2.2E-05 7.5E-10 71.8 10.3 103 154-277 17-138 (167)
96 2ju5_A Thioredoxin disulfide i 98.0 2.3E-06 7.7E-11 76.6 3.4 93 154-277 34-132 (154)
97 2v2g_A Peroxiredoxin 6; oxidor 98.0 1.5E-05 5.3E-10 77.4 8.5 103 155-277 17-142 (233)
98 4gqc_A Thiol peroxidase, perox 98.0 3E-06 1E-10 77.1 3.1 104 154-277 18-136 (164)
99 1prx_A HORF6; peroxiredoxin, h 98.0 2.8E-05 9.4E-10 74.7 9.9 103 155-277 19-146 (224)
100 3a2v_A Probable peroxiredoxin; 98.0 9.2E-06 3.1E-10 80.1 6.6 100 159-277 22-139 (249)
101 1xcc_A 1-Cys peroxiredoxin; un 97.9 1.9E-05 6.4E-10 75.6 8.4 103 156-278 20-144 (220)
102 3f9u_A Putative exported cytoc 97.9 4E-06 1.4E-10 75.3 3.4 97 163-277 43-146 (172)
103 2fwh_A Thiol:disulfide interch 97.9 2.7E-05 9.1E-10 67.6 7.9 78 159-275 23-105 (134)
104 3fk8_A Disulphide isomerase; A 97.9 1.3E-05 4.5E-10 68.7 5.6 74 165-277 27-107 (133)
105 2l5l_A Thioredoxin; structural 97.8 7.8E-05 2.7E-09 64.6 8.5 68 166-275 37-106 (136)
106 2voc_A Thioredoxin; electron t 97.7 9.3E-05 3.2E-09 61.7 7.4 68 166-276 16-85 (112)
107 3mng_A Peroxiredoxin-5, mitoch 97.6 0.00031 1E-08 65.0 10.8 104 154-278 29-153 (173)
108 1nsw_A Thioredoxin, TRX; therm 97.6 0.00016 5.5E-09 58.7 7.8 68 166-276 16-85 (105)
109 3die_A Thioredoxin, TRX; elect 97.6 0.00021 7.3E-09 57.8 8.1 68 166-276 18-87 (106)
110 2kuc_A Putative disulphide-iso 97.6 7.5E-05 2.6E-09 63.3 5.6 78 159-276 19-101 (130)
111 2trx_A Thioredoxin; electron t 97.6 0.00019 6.4E-09 58.6 7.5 68 166-276 19-88 (108)
112 3uma_A Hypothetical peroxiredo 97.6 0.00019 6.5E-09 67.0 8.4 129 145-301 28-180 (184)
113 1thx_A Thioredoxin, thioredoxi 97.6 0.00028 9.6E-09 57.9 8.5 68 166-276 24-93 (115)
114 1t00_A Thioredoxin, TRX; redox 97.5 0.00027 9.1E-09 58.2 7.9 68 166-276 22-91 (112)
115 2yzu_A Thioredoxin; redox prot 97.5 0.00032 1.1E-08 56.7 8.2 68 166-276 17-86 (109)
116 3tue_A Tryparedoxin peroxidase 97.5 0.00021 7.1E-09 69.6 8.2 117 146-276 29-161 (219)
117 1xwb_A Thioredoxin; dimerizati 97.5 0.00031 1.1E-08 56.8 8.0 69 165-276 18-88 (106)
118 3sbc_A Peroxiredoxin TSA1; alp 97.5 0.00024 8.2E-09 69.0 8.5 116 147-276 27-157 (216)
119 1dby_A Chloroplast thioredoxin 97.5 0.00037 1.3E-08 56.7 8.5 68 166-276 18-87 (107)
120 2i4a_A Thioredoxin; acidophIle 97.5 0.00032 1.1E-08 56.8 8.0 68 166-276 19-88 (107)
121 1zma_A Bacterocin transport ac 97.5 0.00022 7.7E-09 59.8 7.3 72 166-276 28-101 (118)
122 3d6i_A Monothiol glutaredoxin- 97.5 0.00025 8.4E-09 58.6 7.1 69 166-276 20-90 (112)
123 1x5e_A Thioredoxin domain cont 97.5 0.00022 7.7E-09 60.3 6.9 68 165-275 21-90 (126)
124 1w4v_A Thioredoxin, mitochondr 97.5 0.00034 1.2E-08 59.0 8.0 68 166-276 30-99 (119)
125 3cxg_A Putative thioredoxin; m 97.5 0.00011 3.9E-09 63.9 5.1 73 162-276 35-110 (133)
126 3f3q_A Thioredoxin-1; His TAG, 97.4 0.00033 1.1E-08 58.3 7.7 67 166-276 23-91 (109)
127 2dj1_A Protein disulfide-isome 97.4 0.00037 1.3E-08 59.7 8.2 70 166-275 33-104 (140)
128 1x5d_A Protein disulfide-isome 97.4 0.00034 1.2E-08 59.2 7.9 71 166-275 24-96 (133)
129 3tco_A Thioredoxin (TRXA-1); d 97.4 0.00047 1.6E-08 55.8 8.1 68 166-276 20-89 (109)
130 3uvt_A Thioredoxin domain-cont 97.4 0.00028 9.5E-09 57.5 6.7 72 165-276 19-92 (111)
131 3qou_A Protein YBBN; thioredox 97.4 0.00033 1.1E-08 67.8 8.2 68 166-276 25-94 (287)
132 4euy_A Uncharacterized protein 97.4 0.00023 8E-09 58.5 6.1 67 166-276 17-85 (105)
133 2e0q_A Thioredoxin; electron t 97.4 0.00051 1.7E-08 54.9 7.9 67 166-276 15-83 (104)
134 3gnj_A Thioredoxin domain prot 97.4 0.00047 1.6E-08 56.3 7.8 67 166-275 21-89 (111)
135 1gh2_A Thioredoxin-like protei 97.4 0.00045 1.5E-08 56.6 7.6 67 166-276 20-88 (107)
136 3qfa_C Thioredoxin; protein-pr 97.4 0.00033 1.1E-08 59.1 6.8 68 165-276 29-98 (116)
137 2oe3_A Thioredoxin-3; electron 97.4 0.0005 1.7E-08 58.1 7.8 67 166-276 29-97 (114)
138 2o8v_B Thioredoxin 1; disulfid 97.4 0.00025 8.6E-09 61.2 6.1 68 166-276 39-108 (128)
139 2l6c_A Thioredoxin; oxidoreduc 97.3 0.00092 3.1E-08 55.7 9.2 70 165-276 17-86 (110)
140 1xfl_A Thioredoxin H1; AT3G510 97.3 0.00062 2.1E-08 58.3 8.3 67 166-276 37-105 (124)
141 2dml_A Protein disulfide-isome 97.3 0.00071 2.4E-08 57.2 8.6 66 166-273 34-101 (130)
142 2pu9_C TRX-F, thioredoxin F-ty 97.3 0.00043 1.5E-08 57.2 6.9 69 165-276 22-92 (111)
143 3aps_A DNAJ homolog subfamily 97.3 0.00035 1.2E-08 58.5 6.3 68 166-275 20-89 (122)
144 1fb6_A Thioredoxin M; electron 97.3 0.00071 2.4E-08 54.6 7.9 68 166-276 17-86 (105)
145 3m9j_A Thioredoxin; oxidoreduc 97.3 0.00051 1.7E-08 55.6 7.0 68 165-276 18-87 (105)
146 3d22_A TRXH4, thioredoxin H-ty 97.3 0.0004 1.4E-08 59.8 6.7 68 165-276 44-113 (139)
147 2dj3_A Protein disulfide-isome 97.3 0.00029 9.8E-09 59.9 5.7 69 166-274 24-94 (133)
148 2wz9_A Glutaredoxin-3; protein 97.3 0.00055 1.9E-08 60.7 7.7 67 166-276 31-99 (153)
149 1ep7_A Thioredoxin CH1, H-type 97.3 0.00055 1.9E-08 56.1 7.2 67 167-276 24-92 (112)
150 3zzx_A Thioredoxin; oxidoreduc 97.3 0.00062 2.1E-08 57.7 7.6 70 165-276 18-87 (105)
151 2f51_A Thioredoxin; electron t 97.3 0.00042 1.4E-08 58.8 6.5 67 166-275 22-93 (118)
152 2lst_A Thioredoxin; structural 96.4 4.1E-05 1.4E-09 65.2 0.0 77 158-274 10-92 (130)
153 1qgv_A Spliceosomal protein U5 97.2 0.00039 1.3E-08 61.6 6.0 69 166-277 22-92 (142)
154 1sen_A Thioredoxin-like protei 97.2 6.7E-05 2.3E-09 68.0 1.1 77 160-277 39-119 (164)
155 2dj0_A Thioredoxin-related tra 97.2 0.00087 3E-08 57.9 8.2 69 166-276 25-101 (137)
156 1syr_A Thioredoxin; SGPP, stru 97.2 0.00092 3.1E-08 55.5 8.0 67 166-276 25-93 (112)
157 2pwj_A Mitochondrial peroxired 97.2 0.0016 5.3E-08 59.4 9.9 100 158-277 33-150 (171)
158 2vlu_A Thioredoxin, thioredoxi 97.2 0.00089 3.1E-08 56.0 7.6 67 166-276 33-101 (122)
159 2i1u_A Thioredoxin, TRX, MPT46 97.2 0.0011 3.9E-08 55.0 8.0 68 166-276 29-98 (121)
160 1r26_A Thioredoxin; redox-acti 97.2 0.00096 3.3E-08 57.5 7.6 67 166-276 36-104 (125)
161 3gix_A Thioredoxin-like protei 97.2 0.00054 1.9E-08 61.1 6.2 67 166-275 22-90 (149)
162 2ppt_A Thioredoxin-2; thiredox 97.1 0.00092 3.2E-08 59.9 7.7 86 148-276 41-132 (155)
163 1mek_A Protein disulfide isome 97.1 0.00042 1.4E-08 57.0 4.9 70 166-275 23-94 (120)
164 3hz4_A Thioredoxin; NYSGXRC, P 97.1 0.00098 3.3E-08 58.0 7.3 67 167-276 24-92 (140)
165 2vim_A Thioredoxin, TRX; thior 97.1 0.0013 4.4E-08 52.9 7.4 68 165-276 17-86 (104)
166 3ph9_A Anterior gradient prote 97.1 0.00017 6E-09 65.7 2.4 93 165-304 42-139 (151)
167 1ti3_A Thioredoxin H, PTTRXH1; 97.1 0.0015 5.1E-08 53.4 7.8 67 166-276 25-93 (113)
168 3p2a_A Thioredoxin 2, putative 97.1 0.0013 4.6E-08 57.3 7.9 69 165-276 53-123 (148)
169 1faa_A Thioredoxin F; electron 97.1 0.0011 3.6E-08 55.8 6.7 69 165-276 35-105 (124)
170 3keb_A Probable thiol peroxida 97.0 0.0022 7.6E-08 62.4 9.7 106 154-278 35-153 (224)
171 2vm1_A Thioredoxin, thioredoxi 97.0 0.0017 5.7E-08 53.6 7.4 67 166-276 27-95 (118)
172 1v98_A Thioredoxin; oxidoreduc 97.0 0.0022 7.6E-08 55.4 8.5 68 166-276 49-118 (140)
173 3h79_A Thioredoxin-like protei 97.0 0.0032 1.1E-07 53.4 9.3 72 166-274 32-105 (127)
174 3apo_A DNAJ homolog subfamily 97.0 0.005 1.7E-07 68.3 13.2 148 162-367 450-604 (780)
175 2j23_A Thioredoxin; immune pro 97.0 0.0015 5E-08 55.4 6.9 70 166-277 32-103 (121)
176 1oaz_A Thioredoxin 1; immune s 96.9 0.00048 1.6E-08 59.2 3.5 68 166-276 20-103 (123)
177 3emx_A Thioredoxin; structural 96.9 0.0015 5E-08 56.6 6.6 75 165-276 30-106 (135)
178 3q6o_A Sulfhydryl oxidase 1; p 96.9 0.002 7E-08 61.1 8.1 70 167-273 30-101 (244)
179 2xc2_A Thioredoxinn; oxidoredu 96.9 0.0014 4.7E-08 54.7 6.0 70 164-276 30-99 (117)
180 3apq_A DNAJ homolog subfamily 96.9 0.0023 7.7E-08 59.6 8.0 68 165-275 112-181 (210)
181 3idv_A Protein disulfide-isome 96.8 0.0035 1.2E-07 58.2 8.8 71 166-276 146-218 (241)
182 2dbc_A PDCL2, unnamed protein 96.8 0.0014 4.9E-08 57.1 5.5 63 167-276 30-94 (135)
183 1a8l_A Protein disulfide oxido 96.8 0.016 5.4E-07 53.6 12.8 152 164-368 19-180 (226)
184 3dxb_A Thioredoxin N-terminall 96.7 0.002 6.7E-08 60.7 6.1 68 166-276 29-98 (222)
185 1wou_A Thioredoxin -related pr 96.7 0.0028 9.6E-08 54.0 6.4 76 166-276 23-107 (123)
186 1a8l_A Protein disulfide oxido 96.7 0.0081 2.8E-07 55.6 9.9 71 166-275 133-205 (226)
187 3ira_A Conserved protein; meth 96.6 0.0079 2.7E-07 56.1 9.4 82 162-277 34-120 (173)
188 3uem_A Protein disulfide-isome 96.5 0.017 5.8E-07 57.7 11.6 151 167-367 135-310 (361)
189 1fo5_A Thioredoxin; disulfide 96.5 0.003 1E-07 49.1 4.8 62 168-274 3-66 (85)
190 2djj_A PDI, protein disulfide- 96.5 0.011 3.6E-07 49.1 8.4 69 166-274 24-94 (121)
191 4eo3_A Bacterioferritin comigr 96.4 0.0086 2.9E-07 60.7 9.2 101 154-276 11-116 (322)
192 1nho_A Probable thioredoxin; b 96.4 0.0036 1.2E-07 48.6 5.1 60 170-274 4-65 (85)
193 3t58_A Sulfhydryl oxidase 1; o 96.3 0.0088 3E-07 64.6 8.5 71 167-274 30-105 (519)
194 2yj7_A LPBCA thioredoxin; oxid 95.2 0.00082 2.8E-08 53.8 0.0 68 166-276 18-87 (106)
195 1wmj_A Thioredoxin H-type; str 96.1 0.0015 5.3E-08 54.9 1.2 67 166-276 35-103 (130)
196 2es7_A Q8ZP25_salty, putative 95.9 0.012 4.2E-07 52.5 6.1 66 167-276 34-105 (142)
197 3f8u_A Protein disulfide-isome 95.7 0.013 4.3E-07 61.0 6.2 66 167-273 370-437 (481)
198 3ed3_A Protein disulfide-isome 95.7 0.018 6E-07 57.3 7.0 74 166-279 34-109 (298)
199 2dlx_A UBX domain-containing p 95.6 0.039 1.3E-06 50.3 8.4 72 166-277 41-118 (153)
200 2ywm_A Glutaredoxin-like prote 95.4 0.23 8E-06 46.0 13.2 42 326-368 135-177 (229)
201 2qsi_A Putative hydrogenase ex 95.3 0.046 1.6E-06 49.5 8.0 69 166-277 31-104 (137)
202 2hls_A Protein disulfide oxido 95.2 0.055 1.9E-06 52.0 8.8 71 164-275 135-207 (243)
203 1a0r_P Phosducin, MEKA, PP33; 95.2 0.015 5.1E-07 57.0 4.7 90 166-304 132-223 (245)
204 4f82_A Thioredoxin reductase; 95.2 0.087 3E-06 49.4 9.7 101 156-278 35-155 (176)
205 2ywm_A Glutaredoxin-like prote 95.0 0.064 2.2E-06 49.8 8.2 63 166-274 135-199 (229)
206 1ilo_A Conserved hypothetical 95.0 0.076 2.6E-06 40.5 7.3 59 171-277 3-63 (77)
207 3apo_A DNAJ homolog subfamily 94.9 0.032 1.1E-06 61.8 6.6 67 166-275 674-742 (780)
208 2trc_P Phosducin, MEKA, PP33; 94.7 0.048 1.7E-06 52.0 6.5 91 166-303 119-209 (217)
209 3iv4_A Putative oxidoreductase 94.6 0.15 5.3E-06 44.7 9.1 70 167-277 24-96 (112)
210 2qgv_A Hydrogenase-1 operon pr 94.6 0.094 3.2E-06 47.6 7.9 70 166-276 33-105 (140)
211 2e7p_A Glutaredoxin; thioredox 94.0 0.12 4.1E-06 42.7 6.9 69 165-276 17-85 (116)
212 3uem_A Protein disulfide-isome 93.9 0.052 1.8E-06 54.1 5.2 30 166-195 266-297 (361)
213 3qcp_A QSOX from trypanosoma b 93.9 0.077 2.7E-06 56.9 6.7 69 167-273 42-116 (470)
214 3kp8_A Vkorc1/thioredoxin doma 93.6 0.0045 1.5E-07 52.5 -2.9 34 159-194 4-37 (106)
215 3f8u_A Protein disulfide-isome 93.1 0.15 5.1E-06 52.9 7.2 65 167-274 21-87 (481)
216 3dml_A Putative uncharacterize 93.0 0.027 9.2E-07 49.6 1.2 73 165-276 16-90 (116)
217 2b5e_A Protein disulfide-isome 92.3 0.35 1.2E-05 50.6 8.7 66 166-273 30-97 (504)
218 2r2j_A Thioredoxin domain-cont 92.3 0.24 8.1E-06 50.3 7.2 74 166-276 21-96 (382)
219 1o73_A Tryparedoxin; electron 91.7 0.56 1.9E-05 39.6 7.9 59 317-377 20-81 (144)
220 1eej_A Thiol:disulfide interch 91.5 0.83 2.8E-05 42.8 9.5 95 165-275 84-193 (216)
221 1o8x_A Tryparedoxin, TRYX, TXN 91.0 0.48 1.7E-05 40.4 6.8 52 326-377 27-81 (146)
222 4fo5_A Thioredoxin-like protei 90.9 0.45 1.6E-05 40.5 6.5 52 326-377 31-84 (143)
223 1v58_A Thiol:disulfide interch 90.8 1.6 5.4E-05 41.7 11.0 100 165-274 95-212 (241)
224 2av4_A Thioredoxin-like protei 90.7 0.36 1.2E-05 44.9 6.0 66 167-275 41-108 (160)
225 3s9f_A Tryparedoxin; thioredox 90.5 0.58 2E-05 41.6 7.0 58 319-378 42-102 (165)
226 1i5g_A Tryparedoxin II; electr 90.3 0.67 2.3E-05 39.3 7.1 52 326-377 27-81 (144)
227 1sji_A Calsequestrin 2, calseq 90.3 0.63 2.2E-05 46.4 7.9 71 166-275 27-102 (350)
228 1v5n_A PDI-like hypothetical p 89.6 0.059 2E-06 45.3 -0.2 19 287-305 1-19 (89)
229 3evi_A Phosducin-like protein 89.4 0.23 7.8E-06 43.0 3.4 87 167-303 23-110 (118)
230 1t3b_A Thiol:disulfide interch 89.0 2.4 8.4E-05 39.5 10.4 95 166-275 85-193 (211)
231 3gyk_A 27KDA outer membrane pr 88.4 1.2 4.1E-05 39.4 7.5 31 163-193 18-50 (175)
232 3us3_A Calsequestrin-1; calciu 88.1 0.54 1.8E-05 47.7 5.6 72 166-275 29-104 (367)
233 2b5e_A Protein disulfide-isome 88.0 0.3 1E-05 51.1 3.8 30 166-195 375-406 (504)
234 3q6o_A Sulfhydryl oxidase 1; p 87.5 0.3 1E-05 46.1 3.0 48 227-278 175-222 (244)
235 2k8s_A Thioredoxin; dimer, str 87.3 0.41 1.4E-05 37.4 3.3 18 255-275 49-66 (80)
236 3fkf_A Thiol-disulfide oxidore 87.1 1.2 4.1E-05 37.3 6.4 50 326-377 32-86 (148)
237 1ttz_A Conserved hypothetical 86.3 2.8 9.6E-05 34.2 8.0 32 254-302 41-72 (87)
238 3hcz_A Possible thiol-disulfid 86.2 0.88 3E-05 38.1 5.0 51 326-378 30-84 (148)
239 2lrn_A Thiol:disulfide interch 86.2 1.1 3.6E-05 38.5 5.6 52 326-377 28-81 (152)
240 3die_A Thioredoxin, TRX; elect 85.3 2.1 7.1E-05 33.8 6.6 47 326-372 18-65 (106)
241 3tco_A Thioredoxin (TRXA-1); d 85.3 1.5 5.1E-05 34.7 5.8 50 322-371 16-66 (109)
242 2hze_A Glutaredoxin-1; thiored 85.1 0.79 2.7E-05 38.5 4.2 25 248-275 62-86 (114)
243 3gl3_A Putative thiol:disulfid 84.6 1.9 6.6E-05 36.5 6.5 52 326-377 27-80 (152)
244 3ga4_A Dolichyl-diphosphooligo 84.2 1.5 5.2E-05 41.0 6.1 72 166-274 36-116 (178)
245 2yzu_A Thioredoxin; redox prot 83.8 1.9 6.4E-05 34.1 5.7 47 324-370 15-62 (109)
246 1nsw_A Thioredoxin, TRX; therm 83.7 2.1 7.2E-05 33.9 6.0 47 324-370 14-61 (105)
247 2hls_A Protein disulfide oxido 83.7 13 0.00044 35.3 12.5 42 326-367 137-183 (243)
248 3eur_A Uncharacterized protein 83.7 3.1 0.0001 35.1 7.3 53 326-378 30-87 (142)
249 2i4a_A Thioredoxin; acidophIle 83.2 3.1 0.0001 32.9 6.8 45 325-369 18-63 (107)
250 3fw2_A Thiol-disulfide oxidore 83.2 2.2 7.5E-05 36.4 6.3 52 326-377 32-88 (150)
251 1zzo_A RV1677; thioredoxin fol 82.9 2.3 7.8E-05 34.8 6.0 52 326-378 24-76 (136)
252 2xhf_A Peroxiredoxin 5; oxidor 82.8 8 0.00027 35.6 10.3 62 158-231 32-98 (171)
253 2trx_A Thioredoxin; electron t 82.6 3.3 0.00011 32.9 6.8 45 325-369 18-63 (108)
254 3or5_A Thiol:disulfide interch 82.3 3.4 0.00012 35.3 7.2 52 326-377 33-86 (165)
255 2lrt_A Uncharacterized protein 82.3 2.6 8.8E-05 36.5 6.4 57 319-377 29-87 (152)
256 3h93_A Thiol:disulfide interch 82.3 14 0.0005 32.9 11.7 84 166-275 24-163 (192)
257 3raz_A Thioredoxin-related pro 82.2 2.9 9.9E-05 35.7 6.7 58 315-375 14-73 (151)
258 1t00_A Thioredoxin, TRX; redox 82.1 2.9 9.8E-05 33.6 6.2 47 325-371 21-68 (112)
259 3ha9_A Uncharacterized thiored 81.8 2.2 7.5E-05 36.9 5.8 46 319-367 31-77 (165)
260 1dby_A Chloroplast thioredoxin 81.8 3 0.0001 33.1 6.2 46 325-370 17-63 (107)
261 3ewl_A Uncharacterized conserv 81.6 2.5 8.5E-05 35.4 5.9 52 326-377 26-82 (142)
262 3ul3_B Thioredoxin, thioredoxi 81.4 2.6 9E-05 35.3 6.0 47 324-370 39-86 (128)
263 4evm_A Thioredoxin family prot 81.3 4.1 0.00014 33.0 7.0 39 326-364 21-60 (138)
264 1xwb_A Thioredoxin; dimerizati 81.1 4.4 0.00015 31.9 6.9 45 326-370 19-64 (106)
265 1thx_A Thioredoxin, thioredoxi 80.9 2.8 9.7E-05 33.5 5.8 47 325-371 23-70 (115)
266 2i1u_A Thioredoxin, TRX, MPT46 80.9 3.2 0.00011 33.7 6.2 46 325-370 28-74 (121)
267 3erw_A Sporulation thiol-disul 80.5 3.6 0.00012 34.0 6.5 43 326-368 33-77 (145)
268 1w4v_A Thioredoxin, mitochondr 80.1 3.4 0.00012 34.1 6.2 46 325-370 29-75 (119)
269 1fb6_A Thioredoxin M; electron 80.0 3.8 0.00013 32.2 6.2 45 326-370 17-62 (105)
270 2f9s_A Thiol-disulfide oxidore 79.9 3.6 0.00012 34.9 6.4 52 326-377 25-78 (151)
271 3f3q_A Thioredoxin-1; His TAG, 79.9 3.4 0.00012 33.6 6.0 46 323-369 20-66 (109)
272 3cmi_A Peroxiredoxin HYR1; thi 79.5 2.1 7.2E-05 37.7 4.9 66 284-367 6-73 (171)
273 1lu4_A Soluble secreted antige 79.1 3.6 0.00012 33.7 6.0 51 326-377 23-74 (136)
274 1kte_A Thioltransferase; redox 78.9 4.7 0.00016 32.5 6.5 25 249-276 56-80 (105)
275 2djk_A PDI, protein disulfide- 78.8 3.3 0.00011 35.4 5.8 68 167-275 23-93 (133)
276 3kij_A Probable glutathione pe 78.7 2.7 9.3E-05 37.4 5.5 48 319-368 32-81 (180)
277 3lor_A Thiol-disulfide isomera 78.6 6.5 0.00022 33.4 7.7 62 314-377 19-89 (160)
278 1syr_A Thioredoxin; SGPP, stru 78.3 3.4 0.00012 33.5 5.5 46 324-370 23-69 (112)
279 2l5l_A Thioredoxin; structural 78.3 4.2 0.00014 34.4 6.3 46 325-370 36-82 (136)
280 3p2a_A Thioredoxin 2, putative 78.0 4 0.00014 35.0 6.1 50 322-371 50-100 (148)
281 2cq9_A GLRX2 protein, glutared 77.9 4.4 0.00015 34.9 6.4 25 249-276 68-92 (130)
282 2e0q_A Thioredoxin; electron t 77.9 3.9 0.00013 31.7 5.6 47 324-371 13-60 (104)
283 3gnj_A Thioredoxin domain prot 77.7 4.6 0.00016 32.1 6.1 46 325-370 20-66 (111)
284 3hz4_A Thioredoxin; NYSGXRC, P 77.6 4.1 0.00014 34.7 6.1 48 324-371 21-69 (140)
285 3eyt_A Uncharacterized protein 77.4 7.1 0.00024 33.2 7.6 61 315-377 18-87 (158)
286 3kcm_A Thioredoxin family prot 77.4 6.2 0.00021 33.3 7.1 52 326-377 27-81 (154)
287 2lus_A Thioredoxion; CR-Trp16, 78.9 0.48 1.6E-05 39.8 0.0 48 326-375 24-78 (143)
288 2l57_A Uncharacterized protein 76.8 3.5 0.00012 34.1 5.3 44 324-367 23-69 (126)
289 3hxs_A Thioredoxin, TRXP; elec 76.6 4.1 0.00014 34.3 5.8 46 326-371 50-96 (141)
290 2o8v_B Thioredoxin 1; disulfid 76.5 3.9 0.00013 34.6 5.5 45 325-369 38-83 (128)
291 4euy_A Uncharacterized protein 76.5 4.3 0.00015 32.5 5.6 46 323-369 14-60 (105)
292 3aps_A DNAJ homolog subfamily 76.3 5.2 0.00018 32.6 6.2 47 324-370 18-65 (122)
293 2b1k_A Thiol:disulfide interch 76.2 3.5 0.00012 35.7 5.4 50 325-377 49-99 (168)
294 1xiy_A Peroxiredoxin, pfaop; a 76.0 10 0.00035 35.1 8.8 99 158-278 33-151 (182)
295 1ego_A Glutaredoxin; electron 75.4 2 6.7E-05 33.2 3.1 64 171-276 3-70 (85)
296 2p5q_A Glutathione peroxidase 75.2 3.4 0.00012 35.6 5.0 42 326-367 31-74 (170)
297 1ti3_A Thioredoxin H, PTTRXH1; 75.1 7.5 0.00026 30.9 6.7 45 326-371 25-70 (113)
298 1hyu_A AHPF, alkyl hydroperoxi 75.0 3.7 0.00013 43.5 6.1 70 164-277 114-183 (521)
299 2voc_A Thioredoxin; electron t 74.8 3.5 0.00012 33.5 4.7 44 326-369 16-60 (112)
300 2lja_A Putative thiol-disulfid 74.8 2.8 9.6E-05 35.4 4.2 52 326-377 29-82 (152)
301 2b5x_A YKUV protein, TRXY; thi 74.2 6.2 0.00021 32.7 6.2 43 326-368 28-71 (148)
302 1ep7_A Thioredoxin CH1, H-type 74.1 4.9 0.00017 32.1 5.4 44 327-370 24-68 (112)
303 2vup_A Glutathione peroxidase- 73.9 3.8 0.00013 36.8 5.1 48 319-368 42-91 (190)
304 1zma_A Bacterocin transport ac 73.6 5.4 0.00018 32.6 5.6 43 324-368 26-69 (118)
305 2vim_A Thioredoxin, TRX; thior 73.5 6.5 0.00022 30.7 5.9 44 326-370 18-62 (104)
306 3fk8_A Disulphide isomerase; A 73.5 2.5 8.6E-05 35.3 3.6 43 325-367 27-72 (133)
307 2p31_A CL683, glutathione pero 72.6 4.2 0.00014 36.3 5.0 43 326-368 48-92 (181)
308 2oe3_A Thioredoxin-3; electron 72.6 4.9 0.00017 33.2 5.1 46 324-370 27-73 (114)
309 1x5d_A Protein disulfide-isome 72.3 5.9 0.0002 32.7 5.6 45 325-369 23-72 (133)
310 3kh7_A Thiol:disulfide interch 71.8 5.4 0.00018 35.5 5.5 50 326-378 57-107 (176)
311 3m9j_A Thioredoxin; oxidoreduc 71.6 7.7 0.00026 30.4 5.9 44 326-370 19-63 (105)
312 1kng_A Thiol:disulfide interch 71.3 5.5 0.00019 33.6 5.2 50 326-377 41-91 (156)
313 2obi_A PHGPX, GPX-4, phospholi 71.3 6.4 0.00022 34.9 5.9 42 326-367 46-89 (183)
314 1xfl_A Thioredoxin H1; AT3G510 71.1 9.7 0.00033 31.8 6.7 44 326-370 37-81 (124)
315 3dwv_A Glutathione peroxidase- 70.8 2.6 8.8E-05 38.0 3.2 46 318-367 39-88 (187)
316 2vlu_A Thioredoxin, thioredoxi 70.7 7.1 0.00024 31.8 5.7 44 326-370 33-77 (122)
317 2ht9_A Glutaredoxin-2; thiored 70.6 5.3 0.00018 35.6 5.2 25 249-276 90-114 (146)
318 3c1r_A Glutaredoxin-1; oxidize 70.2 4.4 0.00015 34.4 4.4 67 171-275 27-93 (118)
319 1jfu_A Thiol:disulfide interch 70.1 9.9 0.00034 33.5 6.9 52 326-377 59-113 (186)
320 2dj1_A Protein disulfide-isome 70.0 5.8 0.0002 33.2 5.1 48 322-369 29-80 (140)
321 3lwa_A Secreted thiol-disulfid 69.9 6.6 0.00023 34.6 5.7 53 326-378 58-119 (183)
322 1z6n_A Hypothetical protein PA 69.5 3 0.0001 38.0 3.4 48 326-374 53-101 (167)
323 1h75_A Glutaredoxin-like prote 68.7 14 0.00049 28.0 6.7 14 171-184 3-16 (81)
324 3gix_A Thioredoxin-like protei 67.6 6 0.0002 34.6 4.8 45 325-369 21-66 (149)
325 3gv1_A Disulfide interchange p 67.6 56 0.0019 28.9 11.3 95 165-274 12-120 (147)
326 2f51_A Thioredoxin; electron t 67.5 9.4 0.00032 31.5 5.8 44 325-369 21-65 (118)
327 1gh2_A Thioredoxin-like protei 67.4 9.9 0.00034 30.2 5.8 45 325-370 19-64 (107)
328 1qgv_A Spliceosomal protein U5 67.2 9 0.00031 33.2 5.9 43 326-368 22-65 (142)
329 3qfa_C Thioredoxin; protein-pr 67.1 7.8 0.00027 31.9 5.2 44 326-370 30-74 (116)
330 3t58_A Sulfhydryl oxidase 1; o 66.3 5.1 0.00017 43.1 4.8 64 225-293 173-240 (519)
331 2ggt_A SCO1 protein homolog, m 66.0 6.7 0.00023 33.5 4.7 44 326-369 22-72 (164)
332 2j23_A Thioredoxin; immune pro 65.8 4 0.00014 33.8 3.2 48 323-370 29-78 (121)
333 1r7h_A NRDH-redoxin; thioredox 65.5 26 0.0009 25.8 7.5 14 171-184 3-16 (75)
334 2vm1_A Thioredoxin, thioredoxi 65.4 11 0.00038 30.1 5.7 43 326-369 27-70 (118)
335 2dml_A Protein disulfide-isome 65.2 4.8 0.00016 33.3 3.5 46 325-370 33-79 (130)
336 2ppt_A Thioredoxin-2; thiredox 64.8 11 0.00039 33.0 6.1 46 324-369 61-107 (155)
337 2l5o_A Putative thioredoxin; s 63.0 10 0.00036 31.8 5.3 50 326-375 27-79 (153)
338 2ls5_A Uncharacterized protein 66.6 1.6 5.4E-05 37.6 0.0 48 326-375 32-85 (159)
339 2v1m_A Glutathione peroxidase; 62.6 8.5 0.00029 33.0 4.7 48 319-368 25-74 (169)
340 2ju5_A Thioredoxin disulfide i 62.4 6.6 0.00022 34.3 4.0 44 325-368 45-93 (154)
341 2qc7_A ERP31, ERP28, endoplasm 61.3 21 0.00072 34.5 7.7 21 252-273 72-94 (240)
342 3d6i_A Monothiol glutaredoxin- 61.0 8.4 0.00029 30.8 4.2 45 326-370 20-66 (112)
343 3dxb_A Thioredoxin N-terminall 60.2 13 0.00043 34.5 5.8 48 324-371 27-75 (222)
344 3drn_A Peroxiredoxin, bacterio 60.1 8.6 0.00029 33.4 4.4 51 326-377 27-81 (161)
345 2xc2_A Thioredoxinn; oxidoredu 60.0 12 0.00042 30.3 5.0 43 326-370 32-75 (117)
346 1r26_A Thioredoxin; redox-acti 59.6 11 0.00039 31.6 4.9 46 324-370 34-80 (125)
347 3d22_A TRXH4, thioredoxin H-ty 59.5 15 0.00052 30.6 5.7 44 326-370 45-89 (139)
348 2cvb_A Probable thiol-disulfid 58.5 8.4 0.00029 34.1 4.1 43 326-368 32-75 (188)
349 2djj_A PDI, protein disulfide- 58.3 12 0.00042 30.2 4.8 43 325-367 23-71 (121)
350 1v98_A Thioredoxin; oxidoreduc 58.1 26 0.00087 29.4 6.9 44 326-370 50-94 (140)
351 2dj3_A Protein disulfide-isome 57.9 18 0.00061 29.8 5.8 42 326-367 24-68 (133)
352 3hd5_A Thiol:disulfide interch 57.2 17 0.00058 32.6 5.9 43 165-212 23-65 (195)
353 2k6v_A Putative cytochrome C o 57.1 7.5 0.00026 33.4 3.4 48 319-368 29-82 (172)
354 3u5r_E Uncharacterized protein 57.0 7.9 0.00027 35.8 3.7 47 319-367 52-101 (218)
355 1z6m_A Conserved hypothetical 56.0 17 0.00058 31.9 5.6 45 163-212 23-69 (175)
356 2l6c_A Thioredoxin; oxidoreduc 56.0 12 0.00039 30.4 4.2 44 324-368 16-60 (110)
357 2pu9_C TRX-F, thioredoxin F-ty 55.9 23 0.00078 28.2 6.0 41 326-367 23-64 (111)
358 2fwh_A Thiol:disulfide interch 55.6 19 0.00064 30.3 5.6 43 326-369 30-76 (134)
359 1wou_A Thioredoxin -related pr 55.3 20 0.00069 29.7 5.7 42 326-367 23-72 (123)
360 2rli_A SCO2 protein homolog, m 54.8 15 0.00051 31.6 5.0 43 326-368 25-74 (171)
361 3hdc_A Thioredoxin family prot 54.6 22 0.00077 30.3 6.1 43 326-368 40-84 (158)
362 2c0g_A ERP29 homolog, windbeut 53.7 19 0.00065 35.0 6.0 22 251-274 83-106 (248)
363 3zzx_A Thioredoxin; oxidoreduc 53.6 35 0.0012 28.0 6.9 43 326-369 19-62 (105)
364 3msz_A Glutaredoxin 1; alpha-b 53.2 19 0.00066 27.5 4.9 33 171-212 6-38 (89)
365 3uvt_A Thioredoxin domain-cont 53.0 26 0.0009 27.5 5.8 45 327-371 21-69 (111)
366 2gs3_A PHGPX, GPX-4, phospholi 52.5 16 0.00056 32.5 5.0 42 326-367 48-91 (185)
367 2bmx_A Alkyl hydroperoxidase C 52.4 17 0.00057 32.7 5.1 48 326-376 44-96 (195)
368 1xzo_A BSSCO, hypothetical pro 51.9 5.8 0.0002 34.3 1.8 49 326-376 32-90 (174)
369 3ia1_A THIO-disulfide isomeras 51.6 21 0.00073 29.9 5.4 48 328-377 31-81 (154)
370 2jsy_A Probable thiol peroxida 51.4 12 0.0004 32.4 3.7 43 326-369 43-87 (167)
371 2yj7_A LPBCA thioredoxin; oxid 56.5 3.2 0.00011 32.4 0.0 44 325-368 17-61 (106)
372 1faa_A Thioredoxin F; electron 50.4 29 0.001 28.2 5.9 41 326-367 36-77 (124)
373 1xvw_A Hypothetical protein RV 50.3 13 0.00043 31.8 3.7 51 326-377 34-88 (160)
374 3me7_A Putative uncharacterize 50.0 11 0.00037 33.4 3.3 47 320-368 23-74 (170)
375 3ztl_A Thioredoxin peroxidase; 49.7 26 0.00088 32.5 6.0 52 326-378 68-122 (222)
376 2h30_A Thioredoxin, peptide me 49.5 16 0.00054 31.1 4.2 43 325-367 36-80 (164)
377 2dj0_A Thioredoxin-related tra 49.3 12 0.0004 31.5 3.3 45 326-370 25-71 (137)
378 2rem_A Disulfide oxidoreductas 48.9 19 0.00066 31.9 4.8 42 164-212 22-65 (193)
379 2lst_A Thioredoxin; structural 54.4 3.6 0.00012 34.1 0.0 44 324-367 16-63 (130)
380 3ixr_A Bacterioferritin comigr 48.6 37 0.0013 30.2 6.7 50 319-370 45-97 (179)
381 1x5e_A Thioredoxin domain cont 48.1 33 0.0011 28.0 5.9 44 326-370 22-67 (126)
382 2fgx_A Putative thioredoxin; N 47.8 17 0.00058 31.0 4.1 25 169-193 30-56 (107)
383 2yan_A Glutaredoxin-3; oxidore 47.2 16 0.00055 29.9 3.8 25 249-276 60-84 (105)
384 1wjk_A C330018D20RIK protein; 47.2 42 0.0014 27.3 6.3 18 166-183 14-31 (100)
385 1qmv_A Human thioredoxin perox 47.2 19 0.00066 32.3 4.6 51 326-377 33-86 (197)
386 4hde_A SCO1/SENC family lipopr 47.0 19 0.00066 32.0 4.5 49 320-370 27-80 (170)
387 3f9u_A Putative exported cytoc 46.8 10 0.00036 33.1 2.7 45 325-369 45-93 (172)
388 3apq_A DNAJ homolog subfamily 46.4 31 0.001 31.4 5.9 48 324-371 111-159 (210)
389 3h79_A Thioredoxin-like protei 46.1 56 0.0019 26.8 7.0 45 326-370 32-82 (127)
390 1zof_A Alkyl hydroperoxide-red 45.2 12 0.00042 33.6 3.0 54 326-380 32-88 (198)
391 2wz9_A Glutaredoxin-3; protein 45.1 35 0.0012 29.4 5.8 43 327-370 32-75 (153)
392 1we0_A Alkyl hydroperoxide red 44.8 14 0.00049 32.7 3.3 42 326-369 30-76 (187)
393 2znm_A Thiol:disulfide interch 44.8 26 0.00088 31.2 5.0 40 166-212 21-62 (195)
394 3na7_A HP0958; flagellar bioge 44.8 6.5 0.00022 38.3 1.1 12 505-516 221-232 (256)
395 2f8a_A Glutathione peroxidase 44.6 28 0.00095 32.2 5.4 44 320-367 42-89 (208)
396 1uul_A Tryparedoxin peroxidase 43.9 26 0.00088 31.7 4.9 51 326-377 35-88 (202)
397 2ywi_A Hypothetical conserved 42.9 19 0.00065 31.8 3.8 43 326-368 44-89 (196)
398 3gkn_A Bacterioferritin comigr 42.7 41 0.0014 28.7 5.9 55 320-377 30-87 (163)
399 2hyx_A Protein DIPZ; thioredox 42.6 31 0.0011 35.1 5.8 42 326-367 81-124 (352)
400 2c0d_A Thioredoxin peroxidase 42.5 22 0.00076 33.3 4.4 50 326-378 55-109 (221)
401 2pn8_A Peroxiredoxin-4; thiore 41.5 29 0.001 32.0 5.0 53 326-379 47-102 (211)
402 2dlx_A UBX domain-containing p 41.5 18 0.00061 32.6 3.4 44 325-368 40-87 (153)
403 3qou_A Protein YBBN; thioredox 41.1 15 0.00052 34.8 3.0 45 326-370 25-70 (287)
404 1mek_A Protein disulfide isome 40.5 7.5 0.00026 31.0 0.7 45 323-367 20-68 (120)
405 2h01_A 2-Cys peroxiredoxin; th 39.8 19 0.00063 32.2 3.2 51 326-377 30-83 (192)
406 2b7k_A SCO1 protein; metalloch 39.6 32 0.0011 31.1 4.9 43 326-368 40-88 (200)
407 2i81_A 2-Cys peroxiredoxin; st 39.5 26 0.00091 32.4 4.3 51 326-377 51-104 (213)
408 3ira_A Conserved protein; meth 39.3 15 0.00051 33.8 2.6 44 324-367 36-83 (173)
409 1wmj_A Thioredoxin H-type; str 39.1 8.7 0.0003 31.5 0.8 43 326-369 35-78 (130)
410 1sen_A Thioredoxin-like protei 38.8 7.1 0.00024 34.6 0.3 45 324-368 43-88 (164)
411 3cxg_A Putative thioredoxin; m 38.8 26 0.00087 29.6 3.8 41 326-368 39-80 (133)
412 3mhs_C SAGA-associated factor 38.6 29 0.001 29.9 4.0 40 478-517 38-81 (99)
413 1oaz_A Thioredoxin 1; immune s 38.4 7.2 0.00025 32.7 0.2 46 324-369 18-78 (123)
414 1xvq_A Thiol peroxidase; thior 38.1 19 0.00066 31.7 3.1 43 326-370 43-87 (175)
415 2jrp_A Putative cytoplasmic pr 38.0 11 0.00037 31.4 1.3 23 502-524 27-54 (81)
416 3kp9_A Vkorc1/thioredoxin doma 37.9 7.2 0.00025 39.1 0.2 36 158-195 188-223 (291)
417 2khp_A Glutaredoxin; thioredox 37.8 25 0.00086 27.4 3.4 23 251-276 46-68 (92)
418 3rhb_A ATGRXC5, glutaredoxin-C 36.5 79 0.0027 25.7 6.4 25 248-275 60-84 (113)
419 3zrd_A Thiol peroxidase; oxido 36.2 24 0.00081 32.3 3.4 48 319-369 72-121 (200)
420 1q98_A Thiol peroxidase, TPX; 36.2 29 0.00099 30.2 3.9 48 319-369 37-86 (165)
421 2yzh_A Probable thiol peroxida 36.0 47 0.0016 28.9 5.2 52 320-375 42-95 (171)
422 1zye_A Thioredoxin-dependent p 35.9 37 0.0013 31.4 4.7 51 326-377 55-108 (220)
423 2dbc_A PDCL2, unnamed protein 34.9 73 0.0025 26.8 6.1 41 326-367 29-70 (135)
424 3hvm_A Agmatine deiminase; hyd 34.9 39 0.0013 34.6 5.0 108 165-288 209-321 (330)
425 2jne_A Hypothetical protein YF 34.7 18 0.00061 31.2 2.1 23 502-524 57-84 (101)
426 1psq_A Probable thiol peroxida 34.7 54 0.0019 28.3 5.4 47 320-369 37-85 (163)
427 1wik_A Thioredoxin-like protei 34.0 34 0.0012 28.2 3.7 24 249-275 58-81 (109)
428 1nho_A Probable thioredoxin; b 33.6 37 0.0013 25.3 3.7 39 331-369 5-44 (85)
429 2kuc_A Putative disulphide-iso 33.4 26 0.00088 28.7 2.9 43 325-367 25-71 (130)
430 2av4_A Thioredoxin-like protei 33.1 46 0.0016 30.7 4.8 43 326-368 40-83 (160)
431 3hz8_A Thiol:disulfide interch 33.1 68 0.0023 29.0 6.0 42 166-212 23-64 (193)
432 3pwf_A Rubrerythrin; non heme 31.7 24 0.00082 32.6 2.6 55 450-522 115-169 (170)
433 1fov_A Glutaredoxin 3, GRX3; a 31.4 31 0.001 26.0 2.8 23 251-276 41-63 (82)
434 3p7x_A Probable thiol peroxida 31.3 43 0.0015 29.0 4.1 51 320-375 41-93 (166)
435 3ed3_A Protein disulfide-isome 31.2 37 0.0013 33.2 4.1 43 325-367 33-76 (298)
436 2qsi_A Putative hydrogenase ex 31.0 28 0.00094 31.2 2.8 48 322-371 27-80 (137)
437 3h5i_A Response regulator/sens 30.9 1.7E+02 0.0059 23.7 7.7 79 204-299 29-115 (140)
438 3tdg_A DSBG, putative uncharac 30.9 73 0.0025 31.7 6.1 39 166-213 146-186 (273)
439 3ic4_A Glutaredoxin (GRX-1); s 30.7 39 0.0013 26.3 3.4 23 250-275 56-78 (92)
440 1fo5_A Thioredoxin; disulfide 29.3 33 0.0011 25.6 2.6 40 330-369 5-45 (85)
441 3nzn_A Glutaredoxin; structura 29.2 49 0.0017 26.7 3.9 18 250-267 66-83 (103)
442 3tqo_A Cysteinyl-tRNA syntheta 27.3 64 0.0022 34.3 5.3 62 148-214 4-71 (462)
443 3hd5_A Thiol:disulfide interch 26.9 2.9E+02 0.0099 24.3 9.0 42 326-367 24-66 (195)
444 2klx_A Glutaredoxin; thioredox 26.7 62 0.0021 25.0 4.0 22 252-276 45-67 (89)
445 1wgm_A Ubiquitin conjugation f 25.5 29 0.00099 28.9 1.8 27 500-526 16-43 (98)
446 2k8s_A Thioredoxin; dimer, str 25.3 82 0.0028 23.9 4.4 39 329-367 3-41 (80)
447 1dl6_A Transcription factor II 24.6 31 0.0011 26.5 1.7 15 500-514 5-19 (58)
448 1n8j_A AHPC, alkyl hydroperoxi 24.3 1.2E+02 0.004 27.0 5.8 44 326-369 29-75 (186)
449 3qpm_A Peroxiredoxin; oxidored 23.8 1.4E+02 0.0049 28.0 6.6 49 320-370 72-123 (240)
450 3q87_A Putative uncharacterize 23.6 22 0.00076 31.7 0.8 14 503-516 96-109 (125)
451 1lv3_A Hypothetical protein YA 23.3 33 0.0011 27.6 1.7 14 504-517 7-20 (68)
452 1un2_A DSBA, thiol-disulfide i 23.3 55 0.0019 30.2 3.5 55 152-212 99-156 (197)
453 3qmx_A Glutaredoxin A, glutare 22.9 90 0.0031 25.4 4.4 15 171-185 18-32 (99)
454 1dx8_A Rubredoxin; electron tr 22.1 42 0.0014 26.9 2.1 22 501-522 35-56 (70)
455 2r2j_A Thioredoxin domain-cont 21.7 79 0.0027 31.6 4.5 48 324-371 19-73 (382)
456 1xg8_A Hypothetical protein SA 21.2 1.1E+02 0.0036 26.9 4.5 34 355-388 44-81 (111)
457 2i3y_A Epididymal secretory gl 21.2 77 0.0026 29.7 4.0 44 319-367 50-97 (215)
458 6rxn_A Rubredoxin; electron tr 20.9 40 0.0014 25.1 1.6 19 502-520 26-44 (46)
459 1li5_A Cysrs, cysteinyl-tRNA s 20.8 73 0.0025 33.6 4.2 87 149-243 2-109 (461)
460 2jsp_A Transcriptional regulat 20.8 42 0.0014 28.3 1.8 18 500-517 15-32 (87)
461 3emx_A Thioredoxin; structural 20.8 63 0.0021 27.1 3.1 38 329-368 33-71 (135)
462 2a4v_A Peroxiredoxin DOT5; yea 20.3 1.5E+02 0.0052 25.1 5.5 48 326-375 32-84 (159)
463 2kn9_A Rubredoxin; metalloprot 20.2 58 0.002 27.0 2.6 22 501-522 55-76 (81)
464 4ayb_P DNA-directed RNA polyme 20.1 48 0.0016 25.1 1.8 21 494-514 11-31 (48)
No 1
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.54 E-value=6.8e-14 Score=126.93 Aligned_cols=125 Identities=20% Similarity=0.336 Sum_probs=105.9
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+| .+.++.++||.|+|+|.+.||++|. .+.|.++|++++ ...+++||.|++ |.+.+.+..+.
T Consensus 36 ~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~-----~~~~v~vv~v~~--------d~~~~~~~~~~ 101 (165)
T 3s9f_A 36 KQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHH-----DSKNFEIILASW--------DEEEDDFNAYY 101 (165)
T ss_dssp ETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHT-----TTTTEEEEEEEC--------CCSHHHHHHHH
T ss_pred cCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhc-----cCCCeEEEEEec--------CCCHHHHHHHH
Confidence 3456 8999999999999999999999988 567999999995 334799999997 66778899999
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCC-CceecccHHHHHHHh-CCccccCCh
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQ-GRVVNQNALHMMWIW-GSVAFPFSV 295 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pq-Gkv~~~nA~~mI~~w-G~~AfPFT~ 295 (527)
..++|+.+|+.. ......+.+.|++.++|+++++|++ |+++..++.+.+..- ....||+..
T Consensus 102 ~~~~~~~~~~~~---~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~~~~~~~d~~~~~fpw~~ 164 (165)
T 3s9f_A 102 AKMPWLSIPFAN---RNIVEALTKKYSVESIPTLIGLNADTGDTVTTRARHALTQDPMGEQFPWRD 164 (165)
T ss_dssp TTCSSEECCTTC---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred HhCCCcccccCc---hhHHHHHHHHcCCCCCCEEEEEeCCCCEEEecccHHHHhhCcccccCCCCC
Confidence 999999999975 3344788899999999999999998 999999998877654 456688864
No 2
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.53 E-value=1.3e-13 Score=120.31 Aligned_cols=125 Identities=17% Similarity=0.322 Sum_probs=106.5
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+|+.+.++.++||.|+|+|.+.||++|. .+.|.++|++++ ...+++||.|++ |.+.+....+.
T Consensus 15 ~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~-----~~~~~~vv~v~~--------d~~~~~~~~~~ 81 (144)
T 1i5g_A 15 KGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHA-----EKKNFEVMLISW--------DESAEDFKDYY 81 (144)
T ss_dssp ETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHT-----TTTTEEEEEEEC--------CSSHHHHHHHH
T ss_pred cCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc-----cCCCEEEEEEeC--------CCCHHHHHHHH
Confidence 457889999999999999999999999997 567999999984 235799999997 55778889999
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeC-CCCceecccHHHHHHHhCC-ccccCC
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLD-PQGRVVNQNALHMMWIWGS-VAFPFS 294 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~-pqGkv~~~nA~~mI~~wG~-~AfPFT 294 (527)
..++|..+|+.. ......+.+.|++.++|+++++| ++|+++..++...+..-+. ..||++
T Consensus 82 ~~~~~~~~~~~~---~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~ 143 (144)
T 1i5g_A 82 AKMPWLALPFED---RKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQARTMVVKDPEAKDFPWP 143 (144)
T ss_dssp TTCSSEECCTTC---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred HhCCccccccCc---hHHHHHHHHHcCCCCCCEEEEEECCCCcEEeccchhhhhhCcccccCCCC
Confidence 999999999863 23446788899999999999999 8999999999999988874 556764
No 3
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.51 E-value=2.9e-13 Score=117.40 Aligned_cols=125 Identities=18% Similarity=0.323 Sum_probs=104.9
Q ss_pred cCCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 153 ECPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 153 dg~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
...+| .+.++.++||.|+|+|.+.||++|. .+.|.++|++++ ...+++||.|++ |.+.+.+..+
T Consensus 15 ~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~-----~~~~~~vv~i~~--------d~~~~~~~~~ 80 (144)
T 1o73_A 15 LSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHH-----VAKNFEVVLISW--------DENESDFHDY 80 (144)
T ss_dssp BCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHT-----TTTTEEEEEEEC--------CSSHHHHHHH
T ss_pred ecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhc-----cCCCEEEEEEeC--------CCCHHHHHHH
Confidence 34567 8999999999999999999999997 567999999984 235799999997 5567789999
Q ss_pred hcCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeC-CCCceecccHHHHHHHhCC-ccccCC
Q 009735 231 QYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLD-PQGRVVNQNALHMMWIWGS-VAFPFS 294 (527)
Q Consensus 231 ~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~-pqGkv~~~nA~~mI~~wG~-~AfPFT 294 (527)
...++|+.+|+.. ......+.+.|++.++|+++++| ++|+++...+...+..-+. ..||+.
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~W~ 143 (144)
T 1o73_A 81 YGKMPWLALPFDQ---RSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRVIEDPDGANFPWP 143 (144)
T ss_dssp HTTCSSEECCTTC---HHHHHHHHHHHTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred HHhCCceEeeccc---hhHHHHHHHHcCCCCCCEEEEEECCCCeEEecchhhHHhhCCCccCCCCC
Confidence 9999999999863 23446778899999999999999 8999999999998887764 446653
No 4
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.50 E-value=1.7e-13 Score=119.92 Aligned_cols=125 Identities=20% Similarity=0.299 Sum_probs=105.1
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+| .+.++.++||.|+|+|.+.||++|. .+.|.++|++++ ...+++||.|++ |.+.+.+.++.
T Consensus 16 ~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~-----~~~~~~vv~v~~--------d~~~~~~~~~~ 81 (146)
T 1o8x_A 16 RGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFH-----ESKNFEVVFCTW--------DEEEDGFAGYF 81 (146)
T ss_dssp ETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHT-----TTTTEEEEEEEC--------CCSHHHHHHHH
T ss_pred cCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhh-----hcCCeEEEEEeC--------CCCHHHHHHHH
Confidence 3567 9999999999999999999999997 567999999984 235799999997 56778899999
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeC-CCCceecccHHHHHHHhCC-ccccCCh
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLD-PQGRVVNQNALHMMWIWGS-VAFPFSV 295 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~-pqGkv~~~nA~~mI~~wG~-~AfPFT~ 295 (527)
..++|+.+|+.. ......+.+.|++.++|+++++| ++|+++..++...+..-+. .+||+.+
T Consensus 82 ~~~~~~~~~~~~---~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~~ 144 (146)
T 1o8x_A 82 AKMPWLAVPFAQ---SEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATLVKDPEGEQFPWKD 144 (146)
T ss_dssp TTCSSEECCGGG---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHTTCTTCTTTTCCC
T ss_pred HHCCceeeccch---hhHHHHHHHHhCCCCCCEEEEEECCCCeEEEecchhHHhhCCccccCCCCC
Confidence 999999999852 23446788899999999999999 8999999999998877664 5677753
No 5
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.87 E-value=8.2e-13 Score=113.89 Aligned_cols=115 Identities=16% Similarity=0.242 Sum_probs=91.4
Q ss_pred CCCceeeccc-ccCc-EEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 155 PTKRKVSIDV-LRRK-SVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 155 ~~~~kV~Is~-L~gK-~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
.+|..+.++. ++|| .|+|+|.+.||++|. .+.|.++|++++ ..+.+++||.|++ |.+.+...++
T Consensus 12 ~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~----~~~~~~~v~~v~~--------d~~~~~~~~~ 79 (143)
T 2lus_A 12 KNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELV----DDSAPFEIIFVSS--------DRSEDDMFQY 79 (143)
Confidence 4567899999 9999 999999999999987 567999999885 2345799999986 4444445555
Q ss_pred hcC--CCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecccHHHHHHH
Q 009735 231 QYM--MPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWI 285 (527)
Q Consensus 231 ~~~--MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~ 285 (527)
... .+|..+|+.+ ...+.+.+.|++.+.|+++++|++|+++..+|...+..
T Consensus 80 ~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~ 132 (143)
T 2lus_A 80 MMESHGDWLAIPYRS----GPASNVTAKYGITGIPALVIVKKDGTLISMNGRGEVQS 132 (143)
Confidence 444 4899888854 33456778899999999999999999999988876653
No 6
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.17 E-value=9.8e-11 Score=104.13 Aligned_cols=107 Identities=13% Similarity=0.264 Sum_probs=85.8
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+|+.++++.++||.|+|+|.+.||++|. ++.|.++|++.+. .+++||.|++ |..++....+.
T Consensus 22 ~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~------~~~~vv~i~~--------d~~~~~~~~~~ 87 (152)
T 2lrt_A 22 DLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYAS------QGFEIYQISL--------DGDEHFWKTSA 87 (152)
T ss_dssp BTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEEC--------SCCHHHHHHHH
T ss_pred cCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhcc------CCeEEEEEEc--------cCCHHHHHHHH
Confidence 457889999999999999999999999987 6679999999962 2599999986 44555666666
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceeccc
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 278 (527)
..+||..+.-++ .....+.+.|++.+.|+.+++|++|+++...
T Consensus 88 ~~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (152)
T 2lrt_A 88 DNLPWVCVRDAN----GAYSSYISLYNVTNLPSVFLVNRNNELSARG 130 (152)
T ss_dssp TTCSSEEEECSS----GGGCHHHHHHTCCSCSEEEEEETTTEEEEET
T ss_pred hCCCceEEECCC----CcchHHHHHcCcccCceEEEECCCCeEEEec
Confidence 779988776543 2122466788999999999999999998753
No 7
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.15 E-value=6.1e-11 Score=103.20 Aligned_cols=106 Identities=13% Similarity=0.177 Sum_probs=83.6
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHH---HHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHH
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQ---MYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFE 228 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~---iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~ 228 (527)
..+|+.+.++.++||.|+|+|-+.||++|. ++.|.+ +|++.+ +.+++||.|+. |.+.+.+.
T Consensus 18 ~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~------~~~~~vi~i~~--------d~~~~~~~ 83 (142)
T 3eur_A 18 LDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTA------AKKLKVLSIYP--------DEELDEWK 83 (142)
T ss_dssp ETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHH------TTSEEEEEEEC--------SSCHHHHH
T ss_pred cCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhc------cCCeEEEEEEc--------CCCHHHHH
Confidence 357889999999999999999999999987 667999 999986 24699999986 55556666
Q ss_pred HhhcCC--CceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceeccc
Q 009735 229 ALQYMM--PWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 229 ~~~~~M--PWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 278 (527)
.+...+ +|..+.- ......+.+.|++.++|+++++|++|+++..+
T Consensus 84 ~~~~~~~~~~~~~~d-----~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (142)
T 3eur_A 84 KHRNDFAKEWTNGYD-----KELVIKNKNLYDLRAIPTLYLLDKNKTVLLKD 130 (142)
T ss_dssp HHGGGSCTTSEEEEC-----TTCHHHHTTCSCCTTCSEEEEECTTCBEEEEE
T ss_pred HHHHhcccccccccC-----ccchhhhhhhcCCCcCCeEEEECCCCcEEecC
Confidence 655554 5655433 23334467889999999999999999999765
No 8
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.13 E-value=7.4e-11 Score=102.78 Aligned_cols=107 Identities=14% Similarity=0.092 Sum_probs=77.5
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh-
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL- 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~- 230 (527)
..+|+.++++.++||.|+|+|.+.||++|. ++.|.++|++.+ +.+++||.|++ |.+.+....+
T Consensus 19 ~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~------~~~~~vv~vs~--------d~~~~~~~~~~ 84 (143)
T 4fo5_A 19 LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFG------PDKIAMCSISM--------DEKESIFTETV 84 (143)
T ss_dssp -----CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSC------TTTEEEEEEEC--------CSCHHHHHHHH
T ss_pred cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC------cCCEEEEEEEc--------cCCHHHHHHHH
Confidence 367789999999999999999999999988 567999998874 23799999986 3333333333
Q ss_pred -hcCCCc-eeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceeccc
Q 009735 231 -QYMMPW-FSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 231 -~~~MPW-yAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 278 (527)
...++| ..+.-+. .....+.+.|++.++|+.+++|++|+++..+
T Consensus 85 ~~~~~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (143)
T 4fo5_A 85 KIDKLDLSTQFHEGL----GKESELYKKYDLRKGFKNFLINDEGVIIAAN 130 (143)
T ss_dssp HHHTCCGGGEEECTT----GGGSHHHHHTTGGGCCCEEEECTTSBEEEES
T ss_pred HHhCCCCceeeeccc----ccchHHHHHcCCCCCCcEEEECCCCEEEEcc
Confidence 246888 4443322 1124566788999999999999999998764
No 9
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.11 E-value=7.3e-10 Score=97.43 Aligned_cols=109 Identities=18% Similarity=0.187 Sum_probs=82.5
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+|+.+.++.++||.|+|+|.+.||++|. .+.|.++|++.+ +.+++||.|++ |. +.+.-++|-.-
T Consensus 16 ~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~------~~~~~vv~v~~-d~----~~~~~~~~~~~- 83 (152)
T 2lrn_A 16 DLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFK------DKGFTIYGVST-DR----REEDWKKAIEE- 83 (152)
T ss_dssp CSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHT------TTTEEEEEEEC-CS----CHHHHHHHHHH-
T ss_pred cCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhc------cCCeEEEEEEc-cC----CHHHHHHHHHH-
Confidence 356789999999999999999999999998 567999999985 23699999986 21 12223333332
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceeccc
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 278 (527)
..+||..+.-+ ......+.+.|++.+.|+++++|++|+++...
T Consensus 84 ~~~~~~~~~d~----~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 126 (152)
T 2lrn_A 84 DKSYWNQVLLQ----KDDVKDVLESYCIVGFPHIILVDPEGKIVAKE 126 (152)
T ss_dssp HTCCSEEEEEC----HHHHHHHHHHTTCCSSCEEEEECTTSEEEEEC
T ss_pred hCCCCeEEecc----cchhHHHHHHhCCCcCCeEEEECCCCeEEEee
Confidence 36777766543 12346778889999999999999999998764
No 10
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.09 E-value=8.1e-10 Score=96.92 Aligned_cols=108 Identities=12% Similarity=0.257 Sum_probs=83.2
Q ss_pred CCCCceeecc--cccCcEEEEEEecCCCCh--hH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHH
Q 009735 154 CPTKRKVSID--VLRRKSVLLLVSDLDVSN--EE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKF 227 (527)
Q Consensus 154 g~~~~kV~Is--~L~gK~VlLyfSal~~~~--~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F 227 (527)
..+|+.+.++ .++||.|+|+|-+.||++ |. ++.|.++|++.+ .+.+++||.|++ |.+.+..
T Consensus 18 ~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~-----~~~~~~~v~v~~--------d~~~~~~ 84 (150)
T 3fw2_A 18 NAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYK-----KNKYIGMLGISL--------DVDKQQW 84 (150)
T ss_dssp BTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHT-----TCSSEEEEEEEC--------CSCHHHH
T ss_pred CCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhc-----cCCCeEEEEEEc--------CCCHHHH
Confidence 3578899999 999999999999999999 87 667999999982 234699999986 3333444
Q ss_pred HHhh--cCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceeccc
Q 009735 228 EALQ--YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 228 ~~~~--~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 278 (527)
.++. ..+||..+.-+. .....+.+.|++.+.|+++++|++|+++...
T Consensus 85 ~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 133 (150)
T 3fw2_A 85 KDAIKRDTLDWEQVCDFG----GLNSEVAKQYSIYKIPANILLSSDGKILAKN 133 (150)
T ss_dssp HHHHHHTTCCSEEECCSC----GGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred HHHHHHhCCCceEEEcCc----ccchHHHHHcCCCccCeEEEECCCCEEEEcc
Confidence 4433 366887765432 1234667788999999999999999998765
No 11
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.06 E-value=2.2e-10 Score=98.93 Aligned_cols=104 Identities=17% Similarity=0.238 Sum_probs=77.9
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHH---HHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHH
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQ---MYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFE 228 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~---iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~ 228 (527)
..+|+.+.++.++||.|+|+|.+.||++|. ++.|.+ +|++.+. .+++||.|++ |.+.+...
T Consensus 14 ~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~------~~~~~v~v~~--------d~~~~~~~ 79 (142)
T 3ewl_A 14 TVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN------GTLRVLAIYP--------DENREEWA 79 (142)
T ss_dssp CTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH------TSEEEEEEEC--------SSCHHHHH
T ss_pred CCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc------CCeEEEEEEe--------cCCHHHHH
Confidence 356789999999999999999999999997 456777 8888852 3599999986 44555555
Q ss_pred HhhcCC--CceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 229 ALQYMM--PWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 229 ~~~~~M--PWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+...+ +|..+.- ....-...+.|++.+.|+++++|++|+++.
T Consensus 80 ~~~~~~~~~~~~~~d-----~~~~~~~~~~~~v~~~P~~~lid~~G~i~~ 124 (142)
T 3ewl_A 80 TKAVYMPQGWIVGWN-----KAGDIRTRQLYDIRATPTIYLLDGRKRVIL 124 (142)
T ss_dssp HHHTTSCTTCEEEEC-----TTCHHHHTTCSCCCSSSEEEEECTTCBEEE
T ss_pred HHHHHcCCCcceeeC-----CccchhhHHHcCCCCCCeEEEECCCCCEEe
Confidence 555544 5544433 232222245899999999999999999986
No 12
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.99 E-value=2.4e-09 Score=92.15 Aligned_cols=108 Identities=13% Similarity=0.253 Sum_probs=81.0
Q ss_pred CCCCceeecc--cccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHH
Q 009735 154 CPTKRKVSID--VLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 229 (527)
Q Consensus 154 g~~~~kV~Is--~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~ 229 (527)
..+|+.+.++ .++||.|+|+|.+.||++|. .+.|.+++++.+ .+.++++|.|++ |.+.+....
T Consensus 18 ~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~-----~~~~~~~v~v~~--------d~~~~~~~~ 84 (148)
T 3fkf_A 18 NEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYK-----KNKNFAMLGISL--------DIDREAWET 84 (148)
T ss_dssp BTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTT-----TCTTEEEEEEEC--------CSCHHHHHH
T ss_pred CCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhc-----CCCCeEEEEEEC--------CCCHHHHHH
Confidence 4578899999 99999999999999999987 567999998872 234699999986 223333333
Q ss_pred hh--cCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceeccc
Q 009735 230 LQ--YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 230 ~~--~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 278 (527)
+. ..++|..+..+. .....+.+.|++.+.|+++++|++|+++...
T Consensus 85 ~~~~~~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 131 (148)
T 3fkf_A 85 AIKKDTLSWDQVCDFT----GLSSETAKQYAILTLPTNILLSPTGKILARD 131 (148)
T ss_dssp HHHHTTCCSEEECCSC----GGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred HHHHcCCCceEEEccC----CcchHHHHhcCCCCcCEEEEECCCCeEEEec
Confidence 22 456777665432 1134667889999999999999999998664
No 13
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.98 E-value=2.8e-09 Score=93.58 Aligned_cols=105 Identities=12% Similarity=0.108 Sum_probs=80.2
Q ss_pred CCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc
Q 009735 155 PTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 232 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~ 232 (527)
.+|+.+.++.++||.|+|+|.+.||++|. ++.|.++|++++ +.+++||.|++ | +.++-.+|-.- .
T Consensus 12 ~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~------~~~v~vv~v~~-d-----~~~~~~~~~~~-~ 78 (151)
T 3raz_A 12 KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQK------KGSVDMVGIAL-D-----TSDNIGNFLKQ-T 78 (151)
T ss_dssp TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSC------TTTEEEEEEES-S-----CHHHHHHHHHH-S
T ss_pred cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhc------cCCeEEEEEEC-C-----ChHHHHHHHHH-c
Confidence 57889999999999999999999999987 567999998874 34699999987 3 24444555432 3
Q ss_pred CCCceeecCCCCCCHHHHHHHHHhhC--CCCCcEEEEeCCCCceec
Q 009735 233 MMPWFSVHHPSAIDPAVIRYAKEKWD--FRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 233 ~MPWyAVpf~~~i~~~~~r~ike~~~--~~~iP~LVvL~pqGkv~~ 276 (527)
.++|..+.... ...+.+.+.|+ +.++|+++++|++|+++.
T Consensus 79 ~~~~~~~~~~~----~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~ 120 (151)
T 3raz_A 79 PVSYPIWRYTG----ANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQ 120 (151)
T ss_dssp CCSSCEEEECC----SCHHHHHHTTTCCSCCSSEEEEEETTTTEEE
T ss_pred CCCCceEecCc----cchHHHHHHhCCccCCCCEEEEECCCCcEEE
Confidence 45555554432 22356777888 999999999999999865
No 14
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.97 E-value=9.9e-09 Score=90.42 Aligned_cols=114 Identities=11% Similarity=0.126 Sum_probs=85.5
Q ss_pred CCCceeecccccCcEEEEEEecCCCCh-hH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 155 PTKRKVSIDVLRRKSVLLLVSDLDVSN-EE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfSal~~~~-~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
.+|+.++++.++||.|+|+|.+.||++ |. ++.|.++|++++.. ....+++||+|++ |+... +.+.-++|-+-+
T Consensus 11 ~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~--~~~~~~~vv~vs~-d~~~d-~~~~~~~~~~~~ 86 (164)
T 2ggt_A 11 HTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSI--TTLPDLTPLFISI-DPERD-TKEAIANYVKEF 86 (164)
T ss_dssp TTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHS--SSSCCEEEEEEES-CTTTC-CHHHHHHHHHTT
T ss_pred CCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhc--cCCCcEEEEEEEe-CCCCC-CHHHHHHHHHHc
Confidence 567899999999999999999999998 87 66799999999632 1224899999996 42110 123345555433
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhCCCCCc---------------EEEEeCCCCceecc
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKP---------------ILVVLDPQGRVVNQ 277 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP---------------~LVvL~pqGkv~~~ 277 (527)
.++|..+.- +....+.+.+.|++...| ..+++||+|+++..
T Consensus 87 -~~~~~~l~~----~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 142 (164)
T 2ggt_A 87 -SPKLVGLTG----TREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDY 142 (164)
T ss_dssp -CSSCEEEEC----CHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEE
T ss_pred -CCCeEEEeC----CHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEE
Confidence 468877754 234556788889999999 89999999999864
No 15
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.95 E-value=1.9e-09 Score=93.83 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=75.9
Q ss_pred CCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcC
Q 009735 156 TKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYM 233 (527)
Q Consensus 156 ~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~ 233 (527)
+|..+.++.++||.|+|+|.+.||++|. .+.|.+++++++. .+++||.|++ |.+.+....+...
T Consensus 17 ~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~v~v~~--------d~~~~~~~~~~~~ 82 (152)
T 3gl3_A 17 KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKA------KGFQVVAVNL--------DAKTGDAMKFLAQ 82 (152)
T ss_dssp SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGG------GTEEEEEEEC--------CSSHHHHHHHHHH
T ss_pred CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhc------CCeEEEEEEC--------CCCHHHHHHHHHH
Confidence 7779999999999999999999999998 5579999999862 2499999986 3233333333332
Q ss_pred --CCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 234 --MPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 234 --MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
.+|..+.-++ ..+.+.|++.+.|+++++|++|+++..
T Consensus 83 ~~~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (152)
T 3gl3_A 83 VPAEFTVAFDPK-------GQTPRLYGVKGMPTSFLIDRNGKVLLQ 121 (152)
T ss_dssp SCCCSEEEECTT-------CHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred cCCCCceeECCc-------chhHHHcCCCCCCeEEEECCCCCEEEE
Confidence 3444333222 346788999999999999999999864
No 16
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.95 E-value=1.6e-09 Score=94.40 Aligned_cols=106 Identities=16% Similarity=0.189 Sum_probs=79.9
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+|..+.++.++||.|+|+|.+.||++|. .+.|.++|++.+ +.++.+|.|++ |. +++.-++|-. .
T Consensus 17 ~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~------~~~~~~v~v~~-d~----~~~~~~~~~~-~ 84 (152)
T 2lja_A 17 DINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYA------GKDIHFVSLSC-DK----NKKAWENMVT-K 84 (152)
T ss_dssp ETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHST------TSSEEEEEEEC-CS----CHHHHHHHHH-H
T ss_pred cCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhc------cCCeEEEEEEc-cC----cHHHHHHHHH-h
Confidence 467889999999999999999999999997 667999988873 34699999986 21 1222333432 2
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
..++|+.+.... + ..+.+.|++.+.|+++++|++|+++..
T Consensus 85 ~~~~~~~~~~d~--~----~~~~~~~~v~~~P~~~lid~~G~i~~~ 124 (152)
T 2lja_A 85 DQLKGIQLHMGT--D----RTFMDAYLINGIPRFILLDRDGKIISA 124 (152)
T ss_dssp HTCCSEEEECSS--C----THHHHHTTCCSSCCEEEECTTSCEEES
T ss_pred cCCCCceeecCc--c----hhHHHHcCcCCCCEEEEECCCCeEEEc
Confidence 367777666533 1 345677899999999999999999874
No 17
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.94 E-value=3.9e-10 Score=97.06 Aligned_cols=107 Identities=19% Similarity=0.211 Sum_probs=77.8
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+|..+.++.++||.|+|+|.+.||++|. .+.|.++|++.+. .++++|.|++ |. +.+.-++|-.-+
T Consensus 18 ~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~v~v~~-d~----~~~~~~~~~~~~ 86 (148)
T 3hcz_A 18 DTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRA------KGIQVYAANI-ER----KDEEWLKFIRSK 86 (148)
T ss_dssp CTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGG------GTEEEEEEEC-CS----SSHHHHHHHHHH
T ss_pred cCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc------CCEEEEEEEe-cC----CHHHHHHHHHHc
Confidence 356889999999999999999999999987 6679999999862 2599999986 21 122333443322
Q ss_pred cCCC-ceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 232 YMMP-WFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 232 ~~MP-WyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
.++ |..+.-+ .....+.+.|++.+.|+++++|++|+++..
T Consensus 87 -~~~~~~~~~d~-----~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 127 (148)
T 3hcz_A 87 -KIGGWLNVRDS-----KNHTDFKITYDIYATPVLYVLDKNKVIIAK 127 (148)
T ss_dssp -TCTTSEEEECT-----TCCCCHHHHHCCCSSCEEEEECTTCBEEEE
T ss_pred -CCCCceEEecc-----ccchhHHHhcCcCCCCEEEEECCCCcEEEe
Confidence 344 4444332 222236678899999999999999999865
No 18
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.91 E-value=2.4e-09 Score=93.62 Aligned_cols=105 Identities=16% Similarity=0.262 Sum_probs=76.6
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+|+.+.++.++||.|+|+|.+.||++|. .+.|.+++++++. .+++||.|++ |. +.+.-++|-.-+
T Consensus 13 ~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~v~~-d~----~~~~~~~~~~~~ 81 (151)
T 2f9s_A 13 DTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS------QGVEIVAVNV-GE----SKIAVHNFMKSY 81 (151)
T ss_dssp CTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEEE-SC----CHHHHHHHHHHH
T ss_pred cCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc------CCeEEEEEEC-CC----CHHHHHHHHHHc
Confidence 346789999999999999999999999988 5679999999852 3699999986 21 123334443322
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
.++|..+.-++ ..+.+.|++.+.|+++++|++|+++..
T Consensus 82 -~~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 119 (151)
T 2f9s_A 82 -GVNFPVVLDTD-------RQVLDAYDVSPLPTTFLINPEGKVVKV 119 (151)
T ss_dssp -TCCSCEEEETT-------SHHHHHTTCCSSCEEEEECTTSEEEEE
T ss_pred -CCCceEEECCc-------hHHHHhcCCCCCCeEEEECCCCcEEEE
Confidence 34443332221 345677899999999999999999864
No 19
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.89 E-value=1.9e-08 Score=89.46 Aligned_cols=114 Identities=12% Similarity=0.106 Sum_probs=84.1
Q ss_pred CCCceeecccccCcEEEEEEecCCCCh-hH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 155 PTKRKVSIDVLRRKSVLLLVSDLDVSN-EE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfSal~~~~-~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
.+|+.+.++.++||.|+|+|.+.||++ |. ++.|.++|++++.. ....+++||.|++ |+... +.+.-++|-+-+
T Consensus 14 ~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~--~~~~~v~vv~is~-d~~~d-~~~~~~~~~~~~ 89 (171)
T 2rli_A 14 HRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAE--PGLPPVQPVFITV-DPERD-DVEAMARYVQDF 89 (171)
T ss_dssp TTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHS--TTSCCEEEEEEES-CSTTC-CHHHHHHHHHTT
T ss_pred CCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhc--cCCCceEEEEEEE-CCCCC-CHHHHHHHHHHc
Confidence 567899999999999999999999998 86 66799999999632 1235799999996 32110 123344554433
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhCCCCCc---------------EEEEeCCCCceecc
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKP---------------ILVVLDPQGRVVNQ 277 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP---------------~LVvL~pqGkv~~~ 277 (527)
..+|..+.-+ ....+.+.+.|++...| +.+++|++|+++..
T Consensus 90 -~~~~~~l~~~----~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 145 (171)
T 2rli_A 90 -HPRLLGLTGS----TKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDY 145 (171)
T ss_dssp -CTTCCEEECC----HHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEE
T ss_pred -CCCeEEEeCC----HHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEE
Confidence 4677666542 34456677889999888 99999999999864
No 20
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.87 E-value=8e-09 Score=91.51 Aligned_cols=119 Identities=10% Similarity=0.070 Sum_probs=84.8
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+|+.+.++.++||.|+|+|.+.||++|. .+.|.++|++++ +.++.+|.|+. |.+..+|-. .
T Consensus 28 ~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~------~~~~~~v~v~~--------d~~~~~~~~-~ 92 (158)
T 3hdc_A 28 TLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFP------KGDLVVLAVNV--------EKRFPEKYR-R 92 (158)
T ss_dssp CTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSS------TTSEEEEEEEC--------SSSCCGGGG-G
T ss_pred cCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcc------cCCeEEEEEeC--------CHHHHHHHH-H
Confidence 467889999999999999999999999987 567999999884 24688888875 222223322 2
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec-------ccHHHHHHHhCCccccCC
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN-------QNALHMMWIWGSVAFPFS 294 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~-------~nA~~mI~~wG~~AfPFT 294 (527)
..++|..+.-++ ..+.+.|++.+.|+++++|++|+++. .+.-+++..+...-|||.
T Consensus 93 ~~~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~~~ 155 (158)
T 3hdc_A 93 APVSFNFLSDAT-------GQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGHHH 155 (158)
T ss_dssp CCCSCEEEECTT-------SHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC----
T ss_pred cCCCceEEECch-------HHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccccc
Confidence 345554443221 35678889999999999999999874 455666777766666663
No 21
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.86 E-value=2.2e-08 Score=83.93 Aligned_cols=109 Identities=17% Similarity=0.187 Sum_probs=77.5
Q ss_pred CCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc
Q 009735 155 PTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 232 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~ 232 (527)
.+|+.+.++.++||.|+|+|.+.||++|. .+.|.+++++. +.++.+|.|...+.+ .+.+.+....+..
T Consensus 10 ~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~-------~~~~~~v~i~~~~~~---~~~~~~~~~~~~~ 79 (138)
T 4evm_A 10 VDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEA-------GDDYVVLTVVSPGHK---GEQSEADFKNWYK 79 (138)
T ss_dssp TTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTC-------TTTEEEEEEECTTST---TCCCHHHHHHHHT
T ss_pred CCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHh-------CCCcEEEEEEcCCCC---chhhHHHHHHHHh
Confidence 46789999999999999999999999987 44677777763 246888887432211 2445666777776
Q ss_pred CCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 233 MMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 233 ~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
..++...|.- .|.. ..+.+.|++.+.|+++++|++|+++..
T Consensus 80 ~~~~~~~~~~--~d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 120 (138)
T 4evm_A 80 GLDYKNLPVL--VDPS--GKLLETYGVRSYPTQAFIDKEGKLVKT 120 (138)
T ss_dssp TCCCTTCCEE--ECTT--CHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred hcCCCCeeEE--ECcc--hHHHHHcCcccCCeEEEECCCCcEEEe
Confidence 6655322221 1221 346778899999999999999999754
No 22
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.85 E-value=1.1e-08 Score=89.77 Aligned_cols=113 Identities=14% Similarity=0.167 Sum_probs=75.5
Q ss_pred CCceeecccccCcEEEEEEecCCCChhH---HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCC-CcchhhHHHHHHhh
Q 009735 156 TKRKVSIDVLRRKSVLLLVSDLDVSNEE---LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRST-PWTEAKEHKFEALQ 231 (527)
Q Consensus 156 ~~~kV~Is~L~gK~VlLyfSal~~~~~~---~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~-~w~D~~~~~F~~~~ 231 (527)
+|+.+.++.++||.|+|+|.+.||++|. ++.|.++|++.+ +.++++|.|++-.... .=+.+.-++|-.-
T Consensus 17 ~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~------~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~- 89 (158)
T 3eyt_A 17 SATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFP------EDKVAVLGLHTVFEHHEAMTPISLKAFLHE- 89 (158)
T ss_dssp CSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSC------TTTEEEEEEECCCSCGGGSCHHHHHHHHHH-
T ss_pred CCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhC------cCCEEEEEEEecccccccCCHHHHHHHHHH-
Confidence 5688999999999999999999999986 467999999984 2369999998610000 0012333334321
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
..++|..+--++ .......+.+.|++.++|+++++|++|+++..
T Consensus 90 ~~~~~~~~~d~~--~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 133 (158)
T 3eyt_A 90 YRIKFPVGVDQP--GDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAH 133 (158)
T ss_dssp TTCCSCEEEECC--CSSSSCHHHHHTTCCSSSEEEEECTTSEEEEE
T ss_pred cCCCceEEEcCc--cchhhHHHHHHcCCCCCCEEEEECCCCCEEEE
Confidence 233433222222 10111246678899999999999999999864
No 23
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.84 E-value=5.6e-09 Score=88.56 Aligned_cols=101 Identities=11% Similarity=0.063 Sum_probs=74.5
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+|..+.++.++||.|+|+|.+.||++|. .+.|.+++++.+ +++++.|++ | -+.++-++|-.-
T Consensus 11 ~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~-~----~~~~~~~~~~~~- 76 (136)
T 1lu4_A 11 TLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--------AVTFVGIAT-R----ADVGAMQSFVSK- 76 (136)
T ss_dssp BTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEEC-S----SCHHHHHHHHHH-
T ss_pred cCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--------CcEEEEEEc-C----CCHHHHHHHHHH-
Confidence 356789999999999999999999999998 556888888762 689999986 2 123344444432
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
..++|..+.-++ ..+.+.|++.+.|+++++|++|+++
T Consensus 77 ~~~~~~~~~d~~-------~~~~~~~~i~~~P~~~lid~~G~i~ 113 (136)
T 1lu4_A 77 YNLNFTNLNDAD-------GVIWARYNVPWQPAFVFYRADGTST 113 (136)
T ss_dssp HTCCSEEEECTT-------SHHHHHTTCCSSSEEEEECTTSCEE
T ss_pred cCCCceEEECCc-------hhHHHhcCCCCCCEEEEECCCCcEE
Confidence 244555443222 3456678999999999999999997
No 24
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.83 E-value=9.1e-09 Score=87.93 Aligned_cols=104 Identities=13% Similarity=0.165 Sum_probs=74.5
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+|..+.++. +||.|+|+|.+.||++|. .+.|.++|++.+ ..++++|.|++-+ .+.+.+....+.
T Consensus 22 ~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~------~~~~~~v~v~~d~-----~~~~~~~~~~~~ 89 (145)
T 3erw_A 22 TIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHP------SDSVKLVTVNLVN-----SEQNQQVVEDFI 89 (145)
T ss_dssp CTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCC------CSSEEEEEEECGG-----GSSCHHHHHHHH
T ss_pred cCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcC------CCCEEEEEEEccC-----CcCCHHHHHHHH
Confidence 45677899999 999999999999999998 456999988873 2469999998621 111334444333
Q ss_pred c--CCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 232 Y--MMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 232 ~--~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
. ..+|..+.-+ . ..+.+.|++.+.|+++++|++|+++.
T Consensus 90 ~~~~~~~~~~~d~-----~--~~~~~~~~v~~~P~~~lid~~G~i~~ 129 (145)
T 3erw_A 90 KANKLTFPIVLDS-----K--GELMKEYHIITIPTSFLLNEKGEIEK 129 (145)
T ss_dssp HHTTCCSCEEECS-----S--SHHHHHTTCCEESEEEEECTTCCEEE
T ss_pred HHcCCceeEEEcC-----c--hhHHHhcCcCccCeEEEEcCCCcEEE
Confidence 2 3343332221 1 34677889999999999999999975
No 25
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.82 E-value=1.6e-08 Score=88.99 Aligned_cols=108 Identities=12% Similarity=0.095 Sum_probs=75.1
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+|+.+.++.++||.|+|+|.+.||++|. .+.|.++|++.+ +.++.+|.|++ |. +.+.-++|-.-
T Consensus 21 ~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~------~~~v~~v~v~~-d~----~~~~~~~~~~~- 88 (165)
T 3or5_A 21 TVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWA------SRGFTFVGIAV-NE----QLPNVKNYMKT- 88 (165)
T ss_dssp CTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHT------TTTEEEEEEEC-SC----CHHHHHHHHHH-
T ss_pred CCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhc------cCCeEEEEEEC-CC----CHHHHHHHHHH-
Confidence 367889999999999999999999999988 557999999985 23589999986 21 12233444332
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhh--CCCCCcEEEEeCCCCceecc
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKW--DFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~--~~~~iP~LVvL~pqGkv~~~ 277 (527)
..++|..+.-+ .+..+.+...+ ++.+.|+++++|++|+++..
T Consensus 89 ~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 132 (165)
T 3or5_A 89 QGIIYPVMMAT----PELIRAFNGYIDGGITGIPTSFVIDASGNVSGV 132 (165)
T ss_dssp HTCCSCEEECC----HHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEE
T ss_pred cCCCCceEecC----HHHHHHHhhhhccCCCCCCeEEEECCCCcEEEE
Confidence 34565544431 22222222111 78999999999999999754
No 26
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.80 E-value=1.5e-08 Score=88.39 Aligned_cols=106 Identities=9% Similarity=0.090 Sum_probs=77.2
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+|..+.++.++||.|+|+|.+.||++|. .+.|.+++++.+ +.++.+|.|++ |. -+.+.-++|-..+
T Consensus 15 ~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~------~~~~~~v~v~~-d~---~~~~~~~~~~~~~ 84 (154)
T 3kcm_A 15 TLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMA------GKPFRMLCVSI-DE---GGKVAVEEFFRKT 84 (154)
T ss_dssp CTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT------TSSEEEEEEEC-CT---THHHHHHHHHHHH
T ss_pred cCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc------cCCeEEEEEEc-CC---cchHHHHHHHHHc
Confidence 357789999999999999999999999988 567999998884 24699999986 21 0123334443332
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
..+|..+.-++ ..+.+.|++.+.|..+++|++|+++..
T Consensus 85 -~~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 122 (154)
T 3kcm_A 85 -GFTLPVLLDAD-------KRVGKLYGTTGVPETFVIDRHGVILKK 122 (154)
T ss_dssp -CCCCCEEECTT-------CHHHHHHTCCSBCEEEEECTTSBEEEE
T ss_pred -CCCeeEEecCc-------hHHHHHhCCCCCCeEEEECCCCcEEEE
Confidence 34554443221 345677899999999999999999764
No 27
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.80 E-value=2.6e-08 Score=83.96 Aligned_cols=98 Identities=10% Similarity=0.071 Sum_probs=72.0
Q ss_pred CCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc
Q 009735 155 PTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 232 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~ 232 (527)
.+|..+.++.++||.|+|+|.+.||++|. .+.|.+++++.+ +++++.|++ |.+.+...++..
T Consensus 13 ~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~--------~~~~~~~~~~~~ 76 (136)
T 1zzo_A 13 LDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--------EVTFVGVAG--------LDQVPAMQEFVN 76 (136)
T ss_dssp TTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEEC--------SSCHHHHHHHHH
T ss_pred CCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--------CeEEEEEeC--------CCCHHHHHHHHH
Confidence 46789999999999999999999999997 456888888762 689999986 222333333332
Q ss_pred --CC-CceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 233 --MM-PWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 233 --~M-PWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
.+ +|-.+.-++ ..+.+.|++.+.|+++++|++|+++
T Consensus 77 ~~~~~~~~~~~d~~-------~~~~~~~~i~~~P~~~~id~~g~i~ 115 (136)
T 1zzo_A 77 KYPVKTFTQLADTD-------GSVWANFGVTQQPAYAFVDPHGNVD 115 (136)
T ss_dssp HTTCTTSEEEECTT-------CHHHHHTTCCSSSEEEEECTTCCEE
T ss_pred HcCCCceEEEEcCC-------cHHHHHcCCCCCceEEEECCCCCEE
Confidence 23 444333221 3456778999999999999999997
No 28
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.79 E-value=7e-08 Score=85.35 Aligned_cols=117 Identities=18% Similarity=0.279 Sum_probs=78.4
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCC---CCCcchhhHHHH-
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDR---STPWTEAKEHKF- 227 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~---s~~w~D~~~~~F- 227 (527)
..+|+.+.++.++||.|+|+|.+.||++|. ++.|.++|++++. .+++||.|++ |. ..+++.++-++|
T Consensus 18 ~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~-d~~~~~~~~~~~~~~~~~ 90 (169)
T 2v1m_A 18 DINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVG------KGLRILAFPC-NQFGGQEPWAEAEIKKFV 90 (169)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEEC-CCSTTCCCSCHHHHHHHH
T ss_pred cCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhc------CCeEEEEEEC-CccCCCCCCCHHHHHHHH
Confidence 357789999999999999999999999996 6779999999962 3599999986 21 112334555667
Q ss_pred -HHhhcCCCcee-ecCCCCCCHHHHHHHHHh-hC-----CCCCcEEEEeCCCCceecc
Q 009735 228 -EALQYMMPWFS-VHHPSAIDPAVIRYAKEK-WD-----FRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 228 -~~~~~~MPWyA-Vpf~~~i~~~~~r~ike~-~~-----~~~iP~LVvL~pqGkv~~~ 277 (527)
+.+.-..|.++ +........+..+++++. ++ ++.+|..+++|++|+++..
T Consensus 91 ~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 148 (169)
T 2v1m_A 91 TEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKR 148 (169)
T ss_dssp HHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEE
T ss_pred HHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEE
Confidence 44433334332 111111111234555532 34 5557999999999999864
No 29
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.79 E-value=9.8e-09 Score=91.17 Aligned_cols=105 Identities=15% Similarity=0.197 Sum_probs=73.9
Q ss_pred CCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCC----------CCc-ch
Q 009735 155 PTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRS----------TPW-TE 221 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s----------~~w-~D 221 (527)
.+|+.+.++.++||.|+|+|.+.||++|. .+.|.++|++.+ +++||.|++ |.+ ... ..
T Consensus 25 ~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--------~v~vv~i~~-d~~~~~~~~~~~~~~~~~~ 95 (165)
T 3ha9_A 25 IDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--------EISVIAIDF-WTAEALKALGLNKPGYPPP 95 (165)
T ss_dssp TTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--------TEEEEEEEC-CSHHHHHHHTCCSTTSCCC
T ss_pred CCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--------CcEEEEEEe-cccccccccccccccCCCC
Confidence 46789999999999999999999999998 556888888762 699999986 200 000 00
Q ss_pred hhHHHHHHhhcC--C-CceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 222 AKEHKFEALQYM--M-PWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 222 ~~~~~F~~~~~~--M-PWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+.+....+... + +|..+-- + ..+.+.|++.+.|+++++|++|+++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~d-~-------~~~~~~~~v~~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 96 DTPEMFRKFIANYGDPSWIMVMD-D-------GSLVEKFNVRSIDYIVIMDKSSNVLY 145 (165)
T ss_dssp CCHHHHHHHHHHHSCTTSEEEEC-C-------SHHHHHTTCCSSSEEEEEETTCCEEE
T ss_pred CCHHHHHHHHHHcCCCCeeEEeC-h-------HHHHHHhCCCCceEEEEEcCCCcEEE
Confidence 233333333332 2 3333222 1 34667789999999999999999998
No 30
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.78 E-value=4.6e-08 Score=83.80 Aligned_cols=117 Identities=10% Similarity=0.081 Sum_probs=79.2
Q ss_pred CCCCccccC----CCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCc
Q 009735 146 DDQLPLVEC----PTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPW 219 (527)
Q Consensus 146 ~~~~pl~dg----~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w 219 (527)
|+..|-|.. .+|..+.++.++||.|+|+|.+.||++|. .+.|.++|++.+ . ++.++.|++-+....=
T Consensus 4 g~~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~-----~--~~~~~~v~~~~~~~~~ 76 (148)
T 2b5x_A 4 RQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQ-----D--QLNVVAVHMPRSEDDL 76 (148)
T ss_dssp TCBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-----T--TSEEEEEECCCSTTTS
T ss_pred CCCCCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhc-----C--CcEEEEEEcCCCcccc
Confidence 344566655 46788999999999999999999999988 557999998884 2 2999999862111000
Q ss_pred chhhHHHHHHhhcCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 220 TEAKEHKFEALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 220 ~D~~~~~F~~~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
+.+.-.+|-.- ..++|..+.-++ ..+.+.|++.+.|+++++|++|+++..
T Consensus 77 ~~~~~~~~~~~-~~~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 126 (148)
T 2b5x_A 77 DPGKIKETAAE-HDITQPIFVDSD-------HALTDAFENEYVPAYYVFDKTGQLRHF 126 (148)
T ss_dssp SHHHHHHHHHH-TTCCSCEEECSS-------CHHHHHTCCCCSSEEEEECTTCBEEEE
T ss_pred CHHHHHHHHHH-cCCCcceEECCc-------hhHHHHhCCCCCCEEEEECCCCcEEEE
Confidence 22333344322 234444332211 245677899999999999999998863
No 31
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.78 E-value=1.8e-08 Score=88.39 Aligned_cols=115 Identities=18% Similarity=0.159 Sum_probs=76.1
Q ss_pred CCCceeecccccCcEEEEEEecCCCChhH---HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCC-cchhhHHHHHHh
Q 009735 155 PTKRKVSIDVLRRKSVLLLVSDLDVSNEE---LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTP-WTEAKEHKFEAL 230 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfSal~~~~~~---~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~-w~D~~~~~F~~~ 230 (527)
.+|+.+.++.++||.|+|+|.+.||++|. ++.|.++|++.+ +.+++||.|++-....+ -+.+.-++|-.-
T Consensus 18 ~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~------~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~ 91 (160)
T 3lor_A 18 VNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMID------ESQVQVIGLHSVFEHHDVMTPEALKVFIDE 91 (160)
T ss_dssp SSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSC------TTTEEEEEEECCCSCGGGSCHHHHHHHHHH
T ss_pred cCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhC------cCCcEEEEEeccccccccCCHHHHHHHHHH
Confidence 35688999999999999999999999986 457999999984 23599999986210000 023333344321
Q ss_pred hcCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 231 QYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 231 ~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
..++|-.+--++. .....+.+.+.|++.++|+++++|++|+++..
T Consensus 92 -~~~~~~~~~d~~~-~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 136 (160)
T 3lor_A 92 -FGIKFPVAVDMPR-EGQRIPSTMKKYRLEGTPSIILADRKGRIRQV 136 (160)
T ss_dssp -TTCCSCEEEECCC-TTCSSCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred -cCCCCcEEECCcc-ccchhhhHHHhcccCccceEEEECCCCcEEEE
Confidence 2334332222220 00112336678899999999999999999864
No 32
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.77 E-value=7.1e-08 Score=85.38 Aligned_cols=117 Identities=16% Similarity=0.352 Sum_probs=78.6
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCC---CCcchhhHHHHH
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRS---TPWTEAKEHKFE 228 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s---~~w~D~~~~~F~ 228 (527)
..+|+.+.++.++||.|+|+|.+.||++|. ++.|.++|++++. .+++||.|++ |.. ..-+.+.-.+|-
T Consensus 19 ~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~vs~-d~~~~~~~~~~~~~~~~~ 91 (170)
T 2p5q_A 19 DAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKD------QGLEILAFPC-NQFGEEEPGTNDQITDFV 91 (170)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEEC-CTTTTCCCSCHHHHHHHH
T ss_pred cCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhcc------CCEEEEEEEC-CCCCCCCCCCHHHHHHHH
Confidence 356789999999999999999999999996 6779999999962 2599999986 210 001233444554
Q ss_pred H--hhcCCCcee-ecCCCCCCHHHHHHHH-HhhCC--CCCc---EEEEeCCCCceecc
Q 009735 229 A--LQYMMPWFS-VHHPSAIDPAVIRYAK-EKWDF--RKKP---ILVVLDPQGRVVNQ 277 (527)
Q Consensus 229 ~--~~~~MPWyA-Vpf~~~i~~~~~r~ik-e~~~~--~~iP---~LVvL~pqGkv~~~ 277 (527)
. +.-..|.++ +.-......+..++++ +.+++ .++| +.+++|++|+++..
T Consensus 92 ~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~ 149 (170)
T 2p5q_A 92 CTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDR 149 (170)
T ss_dssp HHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEE
T ss_pred HHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEe
Confidence 3 233445443 1111111112445554 34566 7899 99999999999875
No 33
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.77 E-value=3.7e-08 Score=88.00 Aligned_cols=104 Identities=15% Similarity=0.236 Sum_probs=79.0
Q ss_pred CCCCceeecccccCcE-EEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHH
Q 009735 154 CPTKRKVSIDVLRRKS-VLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 229 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~-VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~ 229 (527)
..+|+.+.+++++||. |+|+|- +.||++|. ++.|.++|++++. .+++||.|+. | +.+.-++|-+
T Consensus 15 ~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~vs~-d-----~~~~~~~~~~ 82 (161)
T 3drn_A 15 ADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKD------YDVVVIGVSS-D-----DINSHKRFKE 82 (161)
T ss_dssp ETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHT------TCEEEEEEES-C-----CHHHHHHHHH
T ss_pred cCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH------cCCEEEEEeC-C-----CHHHHHHHHH
Confidence 4578899999999998 999998 99999987 6679999999962 3599999986 3 2444555544
Q ss_pred hhcCCCceeecCCCCCCHHHHHHHHHhhCCCC----CcEEEEeCCCCceecc
Q 009735 230 LQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRK----KPILVVLDPQGRVVNQ 277 (527)
Q Consensus 230 ~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~----iP~LVvL~pqGkv~~~ 277 (527)
-+ .+||..+.-++ ..+.+.|++.+ +|..+++|++|+++..
T Consensus 83 ~~-~~~~~~~~d~~-------~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~ 126 (161)
T 3drn_A 83 KY-KLPFILVSDPD-------KKIRELYGAKGFILPARITFVIDKKGIIRHI 126 (161)
T ss_dssp HT-TCCSEEEECTT-------SHHHHHTTCCCSSSCCCEEEEECTTSBEEEE
T ss_pred Hh-CCCceEEECCc-------HHHHHHcCCCCcCcccceEEEECCCCEEEEE
Confidence 32 45655443322 34567889999 9999999999999754
No 34
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.76 E-value=6e-08 Score=86.36 Aligned_cols=114 Identities=11% Similarity=0.146 Sum_probs=76.3
Q ss_pred CCCCceeecccccCcEEEEEEecCCCC-hhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVS-NEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~-~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
..+|+.+++++++||.|+|+|-+.||+ +|. ++.|.++|++++. .+.+++||.|++ |+... +.+.-++|-.-
T Consensus 20 ~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~----~~~~~~vv~is~-d~~~d-~~~~~~~~~~~ 93 (174)
T 1xzo_A 20 NQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKA----ENIDVRIISFSV-DPEND-KPKQLKKFAAN 93 (174)
T ss_dssp CTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHH----TTCCCEEEEEES-CTTTC-CHHHHHHHHTT
T ss_pred cCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhh----cCCcEEEEEEEe-CCCCC-CHHHHHHHHHH
Confidence 357889999999999999999999998 665 7789999999863 334799999996 31000 11223344332
Q ss_pred hcCCCc---eeecCCCCCCHHHHHHHH-Hh-----------hCCCCCcEEEEeCCCCceecc
Q 009735 231 QYMMPW---FSVHHPSAIDPAVIRYAK-EK-----------WDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 231 ~~~MPW---yAVpf~~~i~~~~~r~ik-e~-----------~~~~~iP~LVvL~pqGkv~~~ 277 (527)
..+++ ..+.-+ +.+..+.+. .. +++.+.|+.+++|++|+++..
T Consensus 94 -~~~~~~~~~~l~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~ 151 (174)
T 1xzo_A 94 -YPLSFDNWDFLTGY---SQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKD 151 (174)
T ss_dssp -SCCCGGGEEEEBCS---CHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEE
T ss_pred -cCCCCcceEEEeCC---CHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEE
Confidence 23444 333222 234334332 22 356789999999999999864
No 35
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.76 E-value=4.9e-09 Score=92.40 Aligned_cols=111 Identities=13% Similarity=0.086 Sum_probs=80.9
Q ss_pred ccCCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHH
Q 009735 152 VECPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 229 (527)
Q Consensus 152 ~dg~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~ 229 (527)
+...+|..+.++.++||.|+|+|.+.||++|. .+.|.++|++++ ..+++||.|++ |... .+...+.+..
T Consensus 23 l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~------~~~~~vv~v~~-~~~~--~~~~~~~~~~ 93 (164)
T 2h30_A 23 MKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAK------FSSANLITVAS-PGFL--HEKKDGEFQK 93 (164)
T ss_dssp CEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGG------GTTSEEEEEEC-TTST--TCCCTTHHHH
T ss_pred cCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcc------cCCcEEEEEEc-CCCc--cccCHHHHHH
Confidence 33456778999999999999999999999997 567999988875 23599999986 2110 1234456777
Q ss_pred hhcCCCc--eeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 230 LQYMMPW--FSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 230 ~~~~MPW--yAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
+...+.| +.+.... ...+.+.|++.++|+++++|++|+++..
T Consensus 94 ~~~~~~~~~~~~~~d~------~~~~~~~~~v~~~P~~~lid~~G~i~~~ 137 (164)
T 2h30_A 94 WYAGLNYPKLPVVTDN------GGTIAQNLNISVYPSWALIGKDGDVQRI 137 (164)
T ss_dssp HHTTSCCTTSCEEECT------TCHHHHHTTCCSSSEEEEECTTSCEEEE
T ss_pred HHHhCCCCcceEEEcC------chHHHHHcCCCccceEEEECCCCcEEEE
Confidence 6665444 4444422 1346678899999999999999998853
No 36
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.76 E-value=4.8e-08 Score=91.16 Aligned_cols=112 Identities=11% Similarity=0.095 Sum_probs=78.4
Q ss_pred CCCCceeecccccCcEEEEEEecCCCCh-hH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSN-EE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~-~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
..+|+.|+++.++||.|+|+|.+.||++ |. ++.|.++|+++++. .+.+++||.|++ |+. . +..+....+
T Consensus 28 d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~---~~~~v~vv~Is~-D~~---~-d~~~~~~~~ 99 (200)
T 2b7k_A 28 DMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSK---YGITLQPLFITC-DPA---R-DSPAVLKEY 99 (200)
T ss_dssp ETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHH---HCCCCEEEEEES-CTT---T-CCHHHHHHH
T ss_pred cCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHh---hCCceEEEEEEC-CCC---C-CCHHHHHHH
Confidence 3678899999999999999999999998 86 66799999999632 145799999996 310 0 123333333
Q ss_pred hcC--CCceeecCCCCCCHHHHHHHHHhhCCC-CCc---------------EEEEeCCCCceecc
Q 009735 231 QYM--MPWFSVHHPSAIDPAVIRYAKEKWDFR-KKP---------------ILVVLDPQGRVVNQ 277 (527)
Q Consensus 231 ~~~--MPWyAVpf~~~i~~~~~r~ike~~~~~-~iP---------------~LVvL~pqGkv~~~ 277 (527)
... .+|..++-. ......+.+.|++. ++| ..+++|++|+++..
T Consensus 100 ~~~~~~~~~~l~~~----~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~ 160 (200)
T 2b7k_A 100 LSDFHPSILGLTGT----FDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDA 160 (200)
T ss_dssp HTTSCTTCEEEECC----HHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEE
T ss_pred HHHcCCCceEEeCC----HHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEE
Confidence 333 467766642 24455666778876 454 78999999999854
No 37
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.75 E-value=2.8e-08 Score=94.63 Aligned_cols=113 Identities=12% Similarity=0.109 Sum_probs=84.1
Q ss_pred CCCCccccCC-----CCceeecccccCcEEEEEEec-CCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCC
Q 009735 146 DDQLPLVECP-----TKRKVSIDVLRRKSVLLLVSD-LDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRST 217 (527)
Q Consensus 146 ~~~~pl~dg~-----~~~kV~Is~L~gK~VlLyfSa-l~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~ 217 (527)
++..|-|... +|+.|.+++++||.|+|+|-+ .||++|. ++.|.++|++++ +.+++||.|++ |
T Consensus 43 G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~------~~~v~vv~Is~-D--- 112 (222)
T 3ztl_A 43 NRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFN------SRNCQVIACST-D--- 112 (222)
T ss_dssp SEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHH------TTTEEEEEEES-S---
T ss_pred CCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHH------HCCCEEEEEEC-C---
Confidence 3445555543 448999999999999999996 9999887 667999999996 23599999996 3
Q ss_pred CcchhhHHHHHHhh------cCCCceeecCCCCCCHHHHHHHHHhhCCC------CCcEEEEeCCCCceecc
Q 009735 218 PWTEAKEHKFEALQ------YMMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 218 ~w~D~~~~~F~~~~------~~MPWyAVpf~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 277 (527)
+.++.++|.+.. ..++|..+.-++ ..+.+.|++. ..|..+++|++|+++..
T Consensus 113 --~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~-------~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~ 175 (222)
T 3ztl_A 113 --SQYSHLAWDNLDRKSGGLGHMKIPLLADRK-------QEISKAYGVFDEEDGNAFRGLFIIDPNGILRQI 175 (222)
T ss_dssp --CHHHHHHHHHSCGGGTSCCSCSSCEEECSS-------SHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEE
T ss_pred --CHHHHHHHHHHhhhhccccccceeEEeCCc-------hHHHHHcCCeecCCCCccceEEEECCCCeEEEE
Confidence 244556666543 156666554332 3456677888 89999999999999865
No 38
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.75 E-value=5.6e-08 Score=89.48 Aligned_cols=116 Identities=13% Similarity=0.208 Sum_probs=80.6
Q ss_pred CCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCC---CCCcchhhHHHHH-
Q 009735 155 PTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDR---STPWTEAKEHKFE- 228 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~---s~~w~D~~~~~F~- 228 (527)
.+|+.++++.++||.|+|+|.+.||++|. ++.|.++|++++. .+++||.|++ |. -...+.++-++|-
T Consensus 36 ~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~------~~v~vv~vs~-d~~~~~~~~~~~~~~~~~~ 108 (190)
T 2vup_A 36 ADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKS------QGFTVLAFPC-NQFGGQEPGNEEEIKEFVC 108 (190)
T ss_dssp TTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTCEEEEEEC-CCSTTCCCSCHHHHHHHHH
T ss_pred CCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhc------CCeEEEEEEc-CccCCCCCCCHHHHHHHHH
Confidence 56789999999999999999999999985 6789999999962 2599999986 21 0112344455564
Q ss_pred -HhhcCCCceee-cCCCCCCHHHHHHHH-HhhCCCCCc------EEEEeCCCCceecc
Q 009735 229 -ALQYMMPWFSV-HHPSAIDPAVIRYAK-EKWDFRKKP------ILVVLDPQGRVVNQ 277 (527)
Q Consensus 229 -~~~~~MPWyAV-pf~~~i~~~~~r~ik-e~~~~~~iP------~LVvL~pqGkv~~~ 277 (527)
.+.-..|+++- ........+..+++. +.+++.++| +.+++|++|+++..
T Consensus 109 ~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 166 (190)
T 2vup_A 109 TKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVER 166 (190)
T ss_dssp HHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEE
T ss_pred HhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEE
Confidence 44445555541 221111122444444 457888999 99999999999865
No 39
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.74 E-value=2.7e-08 Score=91.56 Aligned_cols=116 Identities=9% Similarity=0.121 Sum_probs=76.8
Q ss_pred CCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc
Q 009735 155 PTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 232 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~ 232 (527)
.+|+.|+++.++||.|+|+|.+.||++|. ++.|.++|++.+. .+++||.|++ |....-...+.+...++..
T Consensus 34 ~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~------~~~~vi~is~-d~~~~~e~~~~~~~~~~~~ 106 (187)
T 3dwv_A 34 ADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKS------QGFTVLAFPS-NQFGGQEPGNEEEIKEFVC 106 (187)
T ss_dssp TTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGG------GTCEEEEEEB-CCCSSCSSSBTTHHHHSCC
T ss_pred CCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhh------CCeEEEEEEC-cccCCCCCCCHHHHHHHHH
Confidence 56789999999999999999999999987 6789999999962 2599999996 2100000012334444333
Q ss_pred ---CCCceeec---CCCCCCHHHHHHHHH----hhCCCCCc---EEEEeCCCCceecc
Q 009735 233 ---MMPWFSVH---HPSAIDPAVIRYAKE----KWDFRKKP---ILVVLDPQGRVVNQ 277 (527)
Q Consensus 233 ---~MPWyAVp---f~~~i~~~~~r~ike----~~~~~~iP---~LVvL~pqGkv~~~ 277 (527)
.++|..+. .......+..++++. .+++..+| +.+++|++|+++..
T Consensus 107 ~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~ 164 (187)
T 3dwv_A 107 TKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVER 164 (187)
T ss_dssp BCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEE
T ss_pred hccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEE
Confidence 44544432 111111134455553 34666778 99999999999865
No 40
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.73 E-value=1.6e-08 Score=95.78 Aligned_cols=110 Identities=10% Similarity=0.012 Sum_probs=77.3
Q ss_pred CCCCceeecccccCcE-EEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCC--CcchhhHHHHH
Q 009735 154 CPTKRKVSIDVLRRKS-VLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRST--PWTEAKEHKFE 228 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~-VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~--~w~D~~~~~F~ 228 (527)
..+|+.|.+++++||. |+|+|.+.||++|. ++.|.++|++.+ +.+++||.|++-+... .-+.+.-++|-
T Consensus 45 ~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~------~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~ 118 (218)
T 3u5r_E 45 DAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYA------GQGLAVVAINSNDAQAFPEETLERVGAEV 118 (218)
T ss_dssp CTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHT------TTTEEEEEEECSCTTTCGGGSHHHHHHHH
T ss_pred CCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHH------hCCcEEEEEECCcccccccCCHHHHHHHH
Confidence 4778899999999995 99999999999987 678999999995 2359999998621100 01233334443
Q ss_pred HhhcCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 229 ALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 229 ~~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
.-+ .++|..+. |.. ..+.+.|++.++|.++++|++|+++..
T Consensus 119 ~~~-~~~~~~l~-----D~~--~~~~~~~~v~~~P~~~liD~~G~i~~~ 159 (218)
T 3u5r_E 119 KAY-GYGFPYLK-----DAS--QSVAKAYGAACTPDFFLYDRERRLVYH 159 (218)
T ss_dssp HHH-TCCSCEEE-----CTT--CHHHHHHTCCEESEEEEECTTCBEEEE
T ss_pred HHh-CCCccEEE-----CCc--cHHHHHcCCCCCCeEEEECCCCcEEEe
Confidence 322 23433332 211 345677899999999999999999843
No 41
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.73 E-value=7e-08 Score=87.80 Aligned_cols=114 Identities=14% Similarity=0.098 Sum_probs=80.8
Q ss_pred CCCCceeecccccCcEEEEEEecCCCC-hhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVS-NEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~-~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
..+|+.|++++++||.|+|+|-+.||+ .|. ++.|.++|++++ +.+.+++||.|++ |+ . =+.+..++|-+-
T Consensus 15 d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~----~~~~~~~vv~is~-d~-~-d~~~~~~~~~~~ 87 (170)
T 3me7_A 15 DSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLG----TPGKDFWVITFTF-DP-K-DTLEDIKRFQKE 87 (170)
T ss_dssp ETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHC----CBTTTBEEEEEEC-CT-T-CCHHHHHHHHHH
T ss_pred cCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhh----hcCCceEEEEEEC-CC-C-CCHHHHHHHHHH
Confidence 467889999999999999999999997 365 678999999995 3457899999996 42 1 123445556543
Q ss_pred hc-CC-CceeecCCCCCCHHHHHHHHHhhC---------CCCCcEEEEeCCCCceecc
Q 009735 231 QY-MM-PWFSVHHPSAIDPAVIRYAKEKWD---------FRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 231 ~~-~M-PWyAVpf~~~i~~~~~r~ike~~~---------~~~iP~LVvL~pqGkv~~~ 277 (527)
+. .. .|.-+--. +....+.+.+.|+ +...|.++++||+|+++..
T Consensus 88 ~~~~~~~w~~l~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~ 142 (170)
T 3me7_A 88 YGIDGKGWKVVKAK---TSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDY 142 (170)
T ss_dssp TTCCSSSEEEEEES---SHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEE
T ss_pred cCCCCCCeEEEeCC---CHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEE
Confidence 33 33 36433222 2345566666655 4567899999999999853
No 42
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.73 E-value=6e-08 Score=87.85 Aligned_cols=113 Identities=12% Similarity=0.053 Sum_probs=76.4
Q ss_pred CCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcC
Q 009735 156 TKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYM 233 (527)
Q Consensus 156 ~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~ 233 (527)
+|+.+.++.++||.|+|+|-+.||++|. ++.|.++|++++...-....+++||.|++ |. -+.+.-++|-.. ..
T Consensus 48 ~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~-d~---~~~~~~~~~~~~-~~ 122 (183)
T 3lwa_A 48 EGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINV-RD---YSRDIAQDFVTD-NG 122 (183)
T ss_dssp TTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEEC-SC---CCHHHHHHHHHH-TT
T ss_pred CCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEEC-CC---CCHHHHHHHHHH-cC
Confidence 7889999999999999999999999987 56799999999742111234559999986 21 012233344332 34
Q ss_pred CCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 234 MPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 234 MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
+||..+.-++ ....+.+. .|++.++|..+++|++|+++..
T Consensus 123 ~~~~~~~d~~---~~~~~~~~-~~~v~~~P~~~lid~~G~i~~~ 162 (183)
T 3lwa_A 123 LDYPSIYDPP---FMTAASLG-GVPASVIPTTIVLDKQHRPAAV 162 (183)
T ss_dssp CCSCEEECTT---CGGGGGTT-TCCTTCCSEEEEECTTSCEEEE
T ss_pred CCccEEECCc---chHHHHhc-cCCCCCCCeEEEECCCCcEEEE
Confidence 6666654432 12222221 2578999999999999999754
No 43
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.73 E-value=1e-07 Score=86.32 Aligned_cols=109 Identities=18% Similarity=0.191 Sum_probs=77.0
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+|+.+.++.++||.|+|+|-+.||++|. ++.|.++|++++ +.+++||.|++ |. -+.+..++|-.-+
T Consensus 47 ~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~------~~~~~vv~v~~-d~---~~~~~~~~~~~~~ 116 (186)
T 1jfu_A 47 DADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLS------GPNFEVVAINI-DT---RDPEKPKTFLKEA 116 (186)
T ss_dssp CTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHC------BTTEEEEEEEC-CC---SCTTHHHHHHHHT
T ss_pred cCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhc------cCCcEEEEEEC-CC---CCHHHHHHHHHHc
Confidence 467889999999999999999999999987 567999999984 25799999986 31 1113345554433
Q ss_pred c--CCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 232 Y--MMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 232 ~--~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
. ..|++.-+. ....+.+.-..+..+.|+.+++|++|+++..
T Consensus 117 ~~~~~~~~~d~~-----~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 159 (186)
T 1jfu_A 117 NLTRLGYFNDQK-----AKVFQDLKAIGRALGMPTSVLVDPQGCEIAT 159 (186)
T ss_dssp TCCTTCCEECTT-----CHHHHHHHTTTCCSSSSEEEEECTTSBEEEE
T ss_pred CCCCCceEECCc-----chHHHHhccccccCCCCEEEEECCCCCEEEE
Confidence 2 356654221 2344444333333599999999999999864
No 44
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.72 E-value=6.4e-08 Score=85.89 Aligned_cols=103 Identities=13% Similarity=0.132 Sum_probs=77.4
Q ss_pred CCCCceeecccccCcEEEEEEec-CCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSD-LDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSa-l~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
..+|+.|.+++++||.|+|+|-+ .||++|. ++.|.++|++++. .+++||.|+. | +.+..++|-.-
T Consensus 22 ~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~------~~~~vv~vs~-d-----~~~~~~~~~~~ 89 (163)
T 3gkn_A 22 LSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDK------AGAKILGVSR-D-----SVKSHDNFCAK 89 (163)
T ss_dssp CSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHH------TTCEEEEEES-S-----CHHHHHHHHHH
T ss_pred CCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHH------CCCEEEEEeC-C-----CHHHHHHHHHH
Confidence 46788999999999999888887 8999887 5679999999963 3599999996 3 34555666553
Q ss_pred hcCCCceeecCCCCCCHHHHHHHHHhhCCCC------------CcEEEEeCCCCceec
Q 009735 231 QYMMPWFSVHHPSAIDPAVIRYAKEKWDFRK------------KPILVVLDPQGRVVN 276 (527)
Q Consensus 231 ~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~------------iP~LVvL~pqGkv~~ 276 (527)
+ .++|..+.-++ ..+.+.|++.. .|..+++|++|+++.
T Consensus 90 ~-~~~~~~~~d~~-------~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~ 139 (163)
T 3gkn_A 90 Q-GFAFPLVSDGD-------EALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQ 139 (163)
T ss_dssp H-CCSSCEEECTT-------CHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEE
T ss_pred h-CCCceEEECCc-------HHHHHHhCCccccccccccccCcceEEEEECCCCeEEE
Confidence 3 45555443222 24456678876 999999999999985
No 45
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.17 E-value=1.5e-09 Score=95.80 Aligned_cols=105 Identities=16% Similarity=0.236 Sum_probs=74.4
Q ss_pred CCCceeecccccCcEEEEEEecCCCChhH--HHHHHH-HHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 155 PTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQ-MYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~-iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
.+|+.+.+++++||.|+|+|.+.||++|. .+.|.+ +|++.+ .+.++++|.|++ |.+.+....+.
T Consensus 21 ~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~-----~~~~~~vv~v~~--------d~~~~~~~~~~ 87 (159)
T 2ls5_A 21 TDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHK-----DNADFALIGIDR--------DEPLEKVLAFA 87 (159)
Confidence 46778999999999999999999999987 556887 887763 245799999986 33333333333
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhC--CCCCcEEEEeCCCCceecc
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWD--FRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~--~~~iP~LVvL~pqGkv~~~ 277 (527)
..+.+ +||-..|.. ..+.+.|+ +.+.|+++++|++|+++..
T Consensus 88 ~~~~~---~~~~~~d~~--~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 130 (159)
T 2ls5_A 88 KSTGV---TYPLGLDPG--ADIFAKYALRDAGITRNVLIDREGKIVKL 130 (159)
Confidence 33332 333333332 44567778 5679999999999998854
No 46
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.70 E-value=5.6e-08 Score=89.84 Aligned_cols=101 Identities=11% Similarity=0.113 Sum_probs=76.1
Q ss_pred ceeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc--
Q 009735 158 RKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY-- 232 (527)
Q Consensus 158 ~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~-- 232 (527)
+.|++++++||.|+|+|- +.||++|. ++.|.++|++++. .+++||.|++ | +.+..++|-.-+.
T Consensus 36 ~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Vs~-d-----~~~~~~~~~~~~~~~ 103 (195)
T 2bmx_A 36 TTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFED------RDAQILGVSI-D-----SEFAHFQWRAQHNDL 103 (195)
T ss_dssp EEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHT------TTEEEEEEES-S-----CHHHHHHHHHHCTTG
T ss_pred cEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHHHHHHHhccc
Confidence 799999999999999999 99999987 6679999999962 3699999986 3 1334455554331
Q ss_pred -CCCceeecCCCCCCHHHHHHHHHhhCCC-----CCcEEEEeCCCCceecc
Q 009735 233 -MMPWFSVHHPSAIDPAVIRYAKEKWDFR-----KKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 233 -~MPWyAVpf~~~i~~~~~r~ike~~~~~-----~iP~LVvL~pqGkv~~~ 277 (527)
.++|..+.-++ ..+.+.|++. ++|+++++|++|+++..
T Consensus 104 ~~~~~~~~~d~~-------~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~ 147 (195)
T 2bmx_A 104 KTLPFPMLSDIK-------RELSQAAGVLNADGVADRVTFIVDPNNEIQFV 147 (195)
T ss_dssp GGCCSCEEECTT-------SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEE
T ss_pred cCCceeEEeCCc-------hHHHHHhCCcccCCCccceEEEEcCCCeEEEE
Confidence 34544333221 3455678998 99999999999999875
No 47
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.69 E-value=2e-08 Score=88.69 Aligned_cols=106 Identities=10% Similarity=0.005 Sum_probs=75.9
Q ss_pred CCCCceeecccccCc-EEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHH
Q 009735 154 CPTKRKVSIDVLRRK-SVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 229 (527)
Q Consensus 154 g~~~~kV~Is~L~gK-~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~ 229 (527)
..+|+.+++++++|| .|+|+|- +.||++|. ++.|.++|++++ +.+++||.|++ | +.+..++|-.
T Consensus 22 ~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~------~~~~~vv~is~-d-----~~~~~~~~~~ 89 (160)
T 1xvw_A 22 DQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFE------NDDSAALAISV-G-----PPPTHKIWAT 89 (160)
T ss_dssp CTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTS------SSSEEEEEEES-C-----CHHHHHHHHH
T ss_pred cCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHH------HCCcEEEEEeC-C-----CHHHHHHHHH
Confidence 457889999999998 8999996 99999997 567998888874 23699999986 3 2334455544
Q ss_pred hhcCCCceeecCCCCCCHHHHHHHHHhhCCC----CCc--EEEEeCCCCceecc
Q 009735 230 LQYMMPWFSVHHPSAIDPAVIRYAKEKWDFR----KKP--ILVVLDPQGRVVNQ 277 (527)
Q Consensus 230 ~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~----~iP--~LVvL~pqGkv~~~ 277 (527)
-+ ..+|..+.- ......+.+.|++. ++| ..+++|++|+++..
T Consensus 90 ~~-~~~~~~~~d-----~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~ 137 (160)
T 1xvw_A 90 QS-GFTFPLLSD-----FWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFA 137 (160)
T ss_dssp HH-TCCSCEEEC-----TTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEE
T ss_pred hc-CCCceEEec-----CCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEE
Confidence 32 234433322 10013456778998 999 99999999999865
No 48
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.68 E-value=3.6e-08 Score=89.69 Aligned_cols=108 Identities=8% Similarity=0.040 Sum_probs=75.3
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCC---cchhhHHHHH
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTP---WTEAKEHKFE 228 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~---w~D~~~~~F~ 228 (527)
..+|+.+.++.++||.|+|+|.+.||++|. ++.|.++|++.+ +. ++||.|++ |.... -+.+.-.+|-
T Consensus 20 ~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~------~~-~~~v~v~~-d~~~~~~~d~~~~~~~~~ 91 (188)
T 2cvb_A 20 DPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYR------GK-VAFVGINA-NDYEKYPEDAPEKMAAFA 91 (188)
T ss_dssp CTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTT------TT-EEEEEEEC-CCTTTCGGGSHHHHHHHH
T ss_pred cCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhh------cC-eEEEEEEc-CccccccccCHHHHHHHH
Confidence 356789999999999999999999999987 678999999884 23 99999986 21100 0122233343
Q ss_pred HhhcCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 229 ALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 229 ~~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
.-+ .++|..+- |.. ..+.+.|++.+.|+++++|++|+++..
T Consensus 92 ~~~-~~~~~~~~-----d~~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 92 EEH-GIFFPYLL-----DET--QEVAKAYRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp HHH-TCCSCEEE-----CSS--SHHHHHTTCCEESEEEEECTTCBEEEE
T ss_pred HHh-CCCceEEE-----CCc--chHHHHcCCCCCCeEEEECCCCcEEEE
Confidence 322 23332222 211 235567899999999999999999876
No 49
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.67 E-value=1e-07 Score=85.79 Aligned_cols=117 Identities=15% Similarity=0.236 Sum_probs=72.6
Q ss_pred CCCceeecccccCcEEEEEEecCCCChhH-HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCc--chhhHHHHHHhh
Q 009735 155 PTKRKVSIDVLRRKSVLLLVSDLDVSNEE-LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPW--TEAKEHKFEALQ 231 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfSal~~~~~~-~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w--~D~~~~~F~~~~ 231 (527)
.+|+.|+++.++||.|+|+|.+.||++|. ++.|.++|++++. .+++||.|++=+...+. +.+..++|-.-.
T Consensus 20 ~~G~~~~l~~~~Gk~vll~F~a~wC~~C~~~~~l~~l~~~~~~------~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~ 93 (171)
T 3cmi_A 20 KKGQPFPFDQLKGKVVLIVNVASKCGFTPQYKELEALYKRYKD------EGFTIIGFPCNQFGHQEPGSDEEIAQFCQLN 93 (171)
T ss_dssp TTSCBCCGGGGTTCEEEEEEEESSSCCHHHHHHHHHHHHHHGG------GTEEEEEEEECSCC-----------------
T ss_pred CCCCEecHHHcCCCEEEEEEEecCCCcchhHHHHHHHHHHhcc------CCeEEEEEECcccCCCCCCCHHHHHHHHHhc
Confidence 46778999999999999999999999987 5579999999962 25999999861000000 112223443111
Q ss_pred cCCCceeecCCCC---CCHHHHHHHH-HhhCCCCCc------EEEEeCCCCceecc
Q 009735 232 YMMPWFSVHHPSA---IDPAVIRYAK-EKWDFRKKP------ILVVLDPQGRVVNQ 277 (527)
Q Consensus 232 ~~MPWyAVpf~~~---i~~~~~r~ik-e~~~~~~iP------~LVvL~pqGkv~~~ 277 (527)
..++|..+.-++. .-.+..+++. +.|++.+.| +.+++|++|+++..
T Consensus 94 ~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 149 (171)
T 3cmi_A 94 YGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYER 149 (171)
T ss_dssp -CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEE
T ss_pred cCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEE
Confidence 2334433321110 0112334443 468999999 99999999999865
No 50
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.67 E-value=5.7e-08 Score=88.84 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=76.9
Q ss_pred eeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc---
Q 009735 159 KVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY--- 232 (527)
Q Consensus 159 kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~--- 232 (527)
.+++++++||.|+|+|- +.||++|. ++.|.++|++++. .+++||.|++ | +.+..++|-..+.
T Consensus 23 ~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~vs~-d-----~~~~~~~~~~~~~~~~ 90 (187)
T 1we0_A 23 EVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKK------LGVEVYSVST-D-----THFVHKAWHENSPAVG 90 (187)
T ss_dssp EEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHH------TTEEEEEEES-S-----CHHHHHHHHHSCHHHH
T ss_pred EecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHH------cCCEEEEEEC-C-----CHHHHHHHHHHhcccc
Confidence 89999999999999999 99999886 6779999999962 2699999986 3 1344555654432
Q ss_pred CCCceeecCCCCCCHHHHHHHHHhhCCC------CCcEEEEeCCCCceecc
Q 009735 233 MMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 233 ~MPWyAVpf~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 277 (527)
.++|..+.-++ ..+.+.|++. +.|+.+++|++|+++..
T Consensus 91 ~~~~~~~~d~~-------~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~ 134 (187)
T 1we0_A 91 SIEYIMIGDPS-------QTISRQFDVLNEETGLADRGTFIIDPDGVIQAI 134 (187)
T ss_dssp TCCSEEEECTT-------CHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CCCceEEECCc-------hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEE
Confidence 56766554322 3455678888 89999999999999865
No 51
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.67 E-value=1.5e-07 Score=85.79 Aligned_cols=116 Identities=13% Similarity=0.133 Sum_probs=76.6
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCC---CCCcchhhHHHHH
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDR---STPWTEAKEHKFE 228 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~---s~~w~D~~~~~F~ 228 (527)
..+|+.++++.++||.|+|+|.+.||++|. ++.|.++|++++. .+++||.|++ |. ....+.++-++|-
T Consensus 34 ~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~------~~v~vv~vs~-d~~~~~e~~~~~~~~~~~ 106 (183)
T 2obi_A 34 DIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAE------CGLRILAFPC-NQFGKQEPGSNEEIKEFA 106 (183)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEEC-CCSTTCCCSCHHHHHHHH
T ss_pred cCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhc------CCeEEEEEEC-CCCCCCCCCCHHHHHHHH
Confidence 356789999999999999999999999986 6679999999962 3599999986 21 0012334445553
Q ss_pred HhhcCCCceeec---CCCCCCHHHHHHHHHhh---C-----CCCCcEEEEeCCCCceecc
Q 009735 229 ALQYMMPWFSVH---HPSAIDPAVIRYAKEKW---D-----FRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 229 ~~~~~MPWyAVp---f~~~i~~~~~r~ike~~---~-----~~~iP~LVvL~pqGkv~~~ 277 (527)
.- ...+|..+- .......+..+++++.. + ++.+|+.+++|++|+++..
T Consensus 107 ~~-~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 165 (183)
T 2obi_A 107 AG-YNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 165 (183)
T ss_dssp HT-TTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEE
T ss_pred HH-cCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEE
Confidence 22 233443332 11111112345555433 3 4457999999999999864
No 52
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.66 E-value=1.7e-07 Score=81.46 Aligned_cols=104 Identities=11% Similarity=0.117 Sum_probs=76.1
Q ss_pred CCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc
Q 009735 155 PTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 232 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~ 232 (527)
.+|..+.++.++||.++|+|.+.||++|. .+.|.+++++.+ +.++.||.|++ |. -+.+.-++|-.- .
T Consensus 16 ~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~------~~~~~vv~v~~-~~---~~~~~~~~~~~~-~ 84 (153)
T 2l5o_A 16 LHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYK------NKNFQVLAVAQ-PI---DPIESVRQYVKD-Y 84 (153)
T ss_dssp TTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGG------GTTEEEEEEEC-TT---SCHHHHHHHHHH-T
T ss_pred CCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhc------cCCeEEEEEec-CC---CCHHHHHHHHHH-c
Confidence 56788999999999999999999999997 567999998885 23699999985 21 123334445332 3
Q ss_pred CCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 233 MMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 233 ~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+||-.+.-++ ..+.+.|++.+.|+++++|++|+++.
T Consensus 85 ~~~~~~~~d~~-------~~~~~~~~i~~~P~~~lid~~G~i~~ 121 (153)
T 2l5o_A 85 GLPFTVMYDAD-------KAVGQAFGTQVYPTSVLIGKKGEILK 121 (153)
T ss_dssp TCCSEEEECSS-------CHHHHHHTCCSSSEEEEECSSSCCCE
T ss_pred CCCceEEcCch-------HHHHHHcCCCccCeEEEECCCCcEEE
Confidence 45654333222 34567789999999999999999874
No 53
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.64 E-value=1.3e-07 Score=82.57 Aligned_cols=106 Identities=12% Similarity=0.098 Sum_probs=78.7
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+|+.+.++.++ |.|+|+|.+.||++|. .+.|.++|++. ++++|.|++ | .+.+.+....+.
T Consensus 18 ~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---------~v~~v~v~~-d-----~~~~~~~~~~~~ 81 (154)
T 3ia1_A 18 DPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---------GVPFYVISR-E-----PRDTREVVLEYM 81 (154)
T ss_dssp CTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---------CCCEEEEEC-C-----TTCCHHHHHHHH
T ss_pred CCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---------CCeEEEEeC-C-----CcccHHHHHHHH
Confidence 3467899999999 9999999999999987 55688888886 488999986 2 234455666666
Q ss_pred cCCCceeecCCCCCC-HHHHHHHHHhhCCCCCcEEEEeCCCCceeccc
Q 009735 232 YMMPWFSVHHPSAID-PAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~-~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 278 (527)
...++ +|+-..+ ......+.+.|++.+.|+++++|++|+++...
T Consensus 82 ~~~~~---~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 126 (154)
T 3ia1_A 82 KTYPR---FIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALF 126 (154)
T ss_dssp TTCTT---EEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEE
T ss_pred HHcCC---CcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEEE
Confidence 55543 2222222 01336678899999999999999999988643
No 54
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.62 E-value=4.5e-07 Score=82.52 Aligned_cols=116 Identities=20% Similarity=0.302 Sum_probs=78.3
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCC--CCCcchhhHHHHHH
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDR--STPWTEAKEHKFEA 229 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~--s~~w~D~~~~~F~~ 229 (527)
..+|+.|+++.++||.|+|+|-+.||++|. ++.|.++|++.+ +.+++||-|++-+. ...-+.++-++|-.
T Consensus 25 d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~------~~~~~vi~is~d~~~~~~~d~~~~~~~~~~ 98 (180)
T 3kij_A 25 DAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFG------PSHFSVLAFPCNQFGESEPRPSKEVESFAR 98 (180)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHT------TTSEEEEEEECCCSTTCCCSCHHHHHHHHH
T ss_pred cCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhc------cCCeEEEEEECCccccCCCCCHHHHHHHHH
Confidence 356889999999999999999999999988 667999999985 23599999986210 00112344455644
Q ss_pred --hhcCCCceeecC-CCCCCHHHHHHHHHhhCCCCCcE----EEEeCCCCceecc
Q 009735 230 --LQYMMPWFSVHH-PSAIDPAVIRYAKEKWDFRKKPI----LVVLDPQGRVVNQ 277 (527)
Q Consensus 230 --~~~~MPWyAVpf-~~~i~~~~~r~ike~~~~~~iP~----LVvL~pqGkv~~~ 277 (527)
+.-..|.++-.- .........+++.... .+.|. .+++|++|+++..
T Consensus 99 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~~~p~~~~~~~lid~~G~i~~~ 151 (180)
T 3kij_A 99 KNYGVTFPIFHKIKILGSEGEPAFRFLVDSS--KKEPRWNFWKYLVNPEGQVVKF 151 (180)
T ss_dssp HHHCCCSCBBCCCCCSSTTCCHHHHHHHHHH--TCCCSSTTCEEEECTTSCEEEE
T ss_pred HhcCCCCceeeeeeccCccccHHHHHHHhcC--CCCccccceEEEECCCCCEEEE
Confidence 344555554111 1111123556665543 47888 9999999999854
No 55
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.62 E-value=8.2e-08 Score=85.14 Aligned_cols=112 Identities=16% Similarity=0.310 Sum_probs=78.0
Q ss_pred CCCceeecccccCcEEEEEEecCCCCh-hH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 155 PTKRKVSIDVLRRKSVLLLVSDLDVSN-EE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfSal~~~~-~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
.+| .++++.++||.|+|+|.+.||++ |. ++.|.++|++++.. ...+++||.|++ |+... +.+.-++|-.-+
T Consensus 24 ~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~---~~~~v~vv~is~-d~~~d-~~~~~~~~~~~~ 97 (172)
T 2k6v_A 24 PQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPK---AQERVQVIFVSV-DPERD-PPEVADRYAKAF 97 (172)
T ss_dssp SSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHH---HHTTEEEEEEES-CTTTC-CHHHHHHHHHHH
T ss_pred CCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhh---ccCCEEEEEEEE-CCCCC-CHHHHHHHHHHh
Confidence 567 99999999999999999999998 86 66799999888521 014799999996 32100 123344555433
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhC---------------CCCCcEEEEeCCCCceeccc
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWD---------------FRKKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~---------------~~~iP~LVvL~pqGkv~~~n 278 (527)
..+|..+.-+ ...++.+.+.|+ +.+.|+++++| +|+++..-
T Consensus 98 -~~~~~~l~d~----~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~ 153 (172)
T 2k6v_A 98 -HPSFLGLSGS----PEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLY 153 (172)
T ss_dssp -CTTEEEECCC----HHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEE
T ss_pred -CCCcEEEeCC----HHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEE
Confidence 3677666542 233445555554 56899999999 99998653
No 56
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.61 E-value=3.3e-08 Score=91.45 Aligned_cols=109 Identities=11% Similarity=0.105 Sum_probs=78.0
Q ss_pred CCc---eeecccc-cCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHH
Q 009735 156 TKR---KVSIDVL-RRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFE 228 (527)
Q Consensus 156 ~~~---kV~Is~L-~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~ 228 (527)
+|+ .|+++++ +||.|+|+|. +.||++|. ++.|.++|++++. .+++||.|++ | +.+..++|.
T Consensus 18 ~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-d-----~~~~~~~~~ 85 (198)
T 1zof_A 18 NNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHE------KGFNVIGVSI-D-----SEQVHFAWK 85 (198)
T ss_dssp TSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHH------TTEEEEEEES-S-----CHHHHHHHH
T ss_pred CCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHH------cCCEEEEEEC-C-----CHHHHHHHH
Confidence 566 8999999 9999999999 99999886 7789999999962 3699999985 3 123344444
Q ss_pred Hh-hcCCCceeecCCCCCCHHHHHHHHHhhCCC-----CCcEEEEeCCCCceeccc
Q 009735 229 AL-QYMMPWFSVHHPSAIDPAVIRYAKEKWDFR-----KKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 229 ~~-~~~MPWyAVpf~~~i~~~~~r~ike~~~~~-----~iP~LVvL~pqGkv~~~n 278 (527)
.- .+...|+.++|+-..|.. +.+.+.|++. ++|..+++|++|+++...
T Consensus 86 ~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~ 139 (198)
T 1zof_A 86 NTPVEKGGIGQVSFPMVADIT--KSISRDYDVLFEEAIALRGAFLIDKNMKVRHAV 139 (198)
T ss_dssp TSCGGGTCCCCCSSCEEECTT--SHHHHHTTCEETTTEECEEEEEEETTTEEEEEE
T ss_pred HhhhhcccccCceeEEEECCc--hHHHHHhCCcccCCcccceEEEECCCCEEEEEE
Confidence 32 222233444443222221 3456778998 999999999999998753
No 57
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.60 E-value=3.4e-07 Score=83.90 Aligned_cols=117 Identities=13% Similarity=0.143 Sum_probs=76.4
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCC---CCCcchhhHHHHH
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDR---STPWTEAKEHKFE 228 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~---s~~w~D~~~~~F~ 228 (527)
..+|+.++++.++||.|+|+|.+.||++|. ++.|.++|++++. .+++||.|++ |. ..+++.++-++|-
T Consensus 36 ~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~------~~v~vv~is~-d~~~~~~~~~~~~~~~~~ 108 (185)
T 2gs3_A 36 DIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAE------CGLRILAFPC-NQFGKQEPGSNEEIKEFA 108 (185)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEEC-CTTTTCCCSCHHHHHHHH
T ss_pred cCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhc------CCeEEEEEEC-cccCCCCCCCHHHHHHHH
Confidence 467889999999999999999999999986 6789999999962 3599999986 21 1123334445553
Q ss_pred -HhhcCCCcee-ecCCCCCCHHHHHHHHHhh---C-----CCCCcEEEEeCCCCceecc
Q 009735 229 -ALQYMMPWFS-VHHPSAIDPAVIRYAKEKW---D-----FRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 229 -~~~~~MPWyA-Vpf~~~i~~~~~r~ike~~---~-----~~~iP~LVvL~pqGkv~~~ 277 (527)
.+.-..|.++ +........+..+++++.. + ++..|..+++|++|+++..
T Consensus 109 ~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 167 (185)
T 2gs3_A 109 AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 167 (185)
T ss_dssp HHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEE
T ss_pred HHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEe
Confidence 3322333332 1111111112444554433 3 3346999999999999865
No 58
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.60 E-value=5.9e-08 Score=88.47 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=68.7
Q ss_pred ceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCC
Q 009735 158 RKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMP 235 (527)
Q Consensus 158 ~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MP 235 (527)
+.+.++.++||.|+|+|.+.||++|. ++.|.++|++ +++||.|++-| +.+.-.+|-+- ...|
T Consensus 49 ~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----------~v~vv~vs~~d-----~~~~~~~~~~~-~~~~ 112 (176)
T 3kh7_A 49 RRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----------GVVIYGINYKD-----DNAAAIKWLNE-LHNP 112 (176)
T ss_dssp SEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----------TCEEEEEEESC-----CHHHHHHHHHH-TTCC
T ss_pred ceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----------CCEEEEEeCCC-----CHHHHHHHHHH-cCCC
Confidence 68999999999999999999999987 4567776653 49999998611 12233333322 2344
Q ss_pred ceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 236 WFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 236 WyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
|..+-... . ..+.+.|++.+.|..+++|++|+++..
T Consensus 113 ~~~~~~d~----~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 148 (176)
T 3kh7_A 113 YLLSISDA----D--GTLGLDLGVYGAPETYLIDKQGIIRHK 148 (176)
T ss_dssp CSEEEEET----T--CHHHHHHTCCSSCEEEEECTTCBEEEE
T ss_pred CceEEECC----c--chHHHHcCCCCCCeEEEECCCCeEEEE
Confidence 44322211 1 345677899999999999999999853
No 59
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.60 E-value=1.1e-07 Score=87.37 Aligned_cols=104 Identities=15% Similarity=0.140 Sum_probs=77.2
Q ss_pred CC--ceeecccc-cCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHH
Q 009735 156 TK--RKVSIDVL-RRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 229 (527)
Q Consensus 156 ~~--~kV~Is~L-~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~ 229 (527)
+| +.|+++++ +||.|+|+|- +.||++|. ++.|.++|++++. .+++||.|++ | +.+..++|..
T Consensus 17 ~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~Is~-d-----~~~~~~~~~~ 84 (192)
T 2h01_A 17 DNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE------RNVELLGCSV-D-----SKFTHLAWKK 84 (192)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHH------TTEEEEEEES-S-----CHHHHHHHHT
T ss_pred CCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEe-C-----CHHHHHHHHH
Confidence 56 79999999 9999999999 99998876 6679999999962 3599999986 3 2334445544
Q ss_pred hhc------CCCceeecCCCCCCHHHHHHHHHhhCCC-----CCcEEEEeCCCCceeccc
Q 009735 230 LQY------MMPWFSVHHPSAIDPAVIRYAKEKWDFR-----KKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 230 ~~~------~MPWyAVpf~~~i~~~~~r~ike~~~~~-----~iP~LVvL~pqGkv~~~n 278 (527)
-+. .++|..+.-++ +.+.+.|++. .+|..+++|++|+++...
T Consensus 85 ~~~~~~~~~~~~~~~l~D~~-------~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~ 137 (192)
T 2h01_A 85 TPLSQGGIGNIKHTLISDIS-------KSIARSYDVLFNESVALRAFVLIDKQGVVQHLL 137 (192)
T ss_dssp SCGGGTCCCSCSSEEEECTT-------SHHHHHTTCEETTTEECCEEEEECTTSBEEEEE
T ss_pred hHHhhCCccCCCcCeEECCc-------HHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEE
Confidence 331 44554333221 3456778998 899999999999998653
No 60
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.58 E-value=1.6e-07 Score=90.09 Aligned_cols=104 Identities=12% Similarity=0.132 Sum_probs=76.7
Q ss_pred CC--ceeecccc-cCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHH
Q 009735 156 TK--RKVSIDVL-RRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 229 (527)
Q Consensus 156 ~~--~kV~Is~L-~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~ 229 (527)
+| +.|+++++ +||.|+|+|- +.||++|. ++.|.++|++++. .+++||.|++ | +.+..++|-+
T Consensus 42 ~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~------~~v~vv~Is~-D-----~~~~~~~~~~ 109 (221)
T 2c0d_A 42 NNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFEN------KNVELLGISV-D-----SVYSHLAWKN 109 (221)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHH------TTEEEEEEES-S-----CHHHHHHHHH
T ss_pred CCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEeC-C-----CHHHHHHHHH
Confidence 56 89999999 9999999998 99998876 6779999999962 3699999996 3 2334556655
Q ss_pred hhc------CCCceeecCCCCCCHHHHHHHHHhhCC-----CCCcEEEEeCCCCceeccc
Q 009735 230 LQY------MMPWFSVHHPSAIDPAVIRYAKEKWDF-----RKKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 230 ~~~------~MPWyAVpf~~~i~~~~~r~ike~~~~-----~~iP~LVvL~pqGkv~~~n 278 (527)
-+. .++|..+--++ ..+.+.|++ ...|..+++|++|+++...
T Consensus 110 ~~~~~~g~~~~~fp~l~D~~-------~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~ 162 (221)
T 2c0d_A 110 MPIEKGGIGNVEFTLVSDIN-------KDISKNYNVLYDNSFALRGLFIIDKNGCVRHQT 162 (221)
T ss_dssp SCGGGTCCCSCSSEEEECTT-------SHHHHHTTCEETTTEECEEEEEECTTSBEEEEE
T ss_pred HhhhhcCccCCceEEEECCc-------hHHHHHcCCcccCCCccceEEEECCCCeEEEEE
Confidence 442 44554332211 345566787 3689999999999998653
No 61
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.57 E-value=2.3e-07 Score=85.86 Aligned_cols=101 Identities=13% Similarity=0.094 Sum_probs=75.3
Q ss_pred ceeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc--
Q 009735 158 RKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY-- 232 (527)
Q Consensus 158 ~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~-- 232 (527)
..|++++++||.|+|+|- +.||++|. ++.|.++|++++. .+++||.|++ | +.++..+|-.-+.
T Consensus 25 ~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-d-----~~~~~~~~~~~~~~~ 92 (197)
T 1qmv_A 25 KEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRK------LGCEVLGVSV-D-----SQFTHLAWINTPRKE 92 (197)
T ss_dssp EEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S-----CHHHHHHHHTSCGGG
T ss_pred cEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHHHHHHHHHhh
Confidence 899999999999999999 99999987 5679999999962 3699999986 3 1333444544321
Q ss_pred ----CCCceeecCCCCCCHHHHHHHHHhhCCC------CCcEEEEeCCCCceecc
Q 009735 233 ----MMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 233 ----~MPWyAVpf~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 277 (527)
.++|..+.-+ . +.+.+.|++. ..|..+++|++|+++..
T Consensus 93 ~~~~~~~~p~l~D~-----~--~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~ 140 (197)
T 1qmv_A 93 GGLGPLNIPLLADV-----T--RRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQI 140 (197)
T ss_dssp TCCCSCSSCEEECT-----T--CHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CCCCCCceEEEECC-----c--HHHHHHcCCccCCCCceeeEEEEECCCCcEEEE
Confidence 4555433321 1 3456678888 79999999999999865
No 62
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.57 E-value=4e-08 Score=89.59 Aligned_cols=109 Identities=8% Similarity=0.059 Sum_probs=75.9
Q ss_pred CCCCceeecccccCcE-EEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCC---cchhhHHHH
Q 009735 154 CPTKRKVSIDVLRRKS-VLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTP---WTEAKEHKF 227 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~-VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~---w~D~~~~~F 227 (527)
..+|+.+.++.++||. |+|+|.+.||++|. ++.|.++|++.+. .+++||.|++ |.... -+.+.-.+|
T Consensus 32 ~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~v~~-d~~~~~~~d~~~~~~~~ 104 (196)
T 2ywi_A 32 VIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMP------KGVSFVAINS-NDAEQYPEDSPENMKKV 104 (196)
T ss_dssp TTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGG------GTCEEEEEEC-SCTTTCGGGSHHHHHHH
T ss_pred cCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHh------CCcEEEEEEC-CccccccccCHHHHHHH
Confidence 5678899999999995 99999999999987 6679999999852 2599999986 21100 122333444
Q ss_pred HHhhcCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 228 EALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 228 ~~~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
-.-+ .++|..+--++ ..+.+.|++.+.|+++++|++|+++..
T Consensus 105 ~~~~-~~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 146 (196)
T 2ywi_A 105 AEEL-GYPFPYLYDET-------QEVAKAYDAACTPDFYIFDRDLKCVYR 146 (196)
T ss_dssp HHHH-TCCSCEEECSS-------CHHHHHHTCCEESEEEEEETTCBEEEE
T ss_pred HHHc-CCCceEEECCc-------hHHHHHhCCCCCCeEEEEcCCCeEEEc
Confidence 3322 23333222211 234567799999999999999999865
No 63
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.56 E-value=2.6e-07 Score=85.96 Aligned_cols=101 Identities=13% Similarity=0.131 Sum_probs=75.7
Q ss_pred ceeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc--
Q 009735 158 RKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY-- 232 (527)
Q Consensus 158 ~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~-- 232 (527)
+.|++++++||.|+|+|- +.||++|. ++.|.++|++++ +.+++||.|++ | +.+...+|-.-+.
T Consensus 27 ~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~------~~~v~vi~Is~-D-----~~~~~~~~~~~~~~~ 94 (202)
T 1uul_A 27 KKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFS------DIGCEVLACSM-D-----SEYSHLAWTSIERKR 94 (202)
T ss_dssp EEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHH------TTTEEEEEEES-S-----CHHHHHHHHHSCGGG
T ss_pred cEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHH------HCCCEEEEEeC-C-----CHHHHHHHHHHHHhh
Confidence 799999999999999999 99999987 667999999996 24699999986 3 2334455544321
Q ss_pred ----CCCceeecCCCCCCHHHHHHHHHhhCCC------CCcEEEEeCCCCceecc
Q 009735 233 ----MMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 233 ----~MPWyAVpf~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 277 (527)
.++|..+.-++ +.+.+.|++. .+|..+++|++|+++..
T Consensus 95 ~~~~~~~~p~l~D~~-------~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~ 142 (202)
T 1uul_A 95 GGLGQMNIPILADKT-------KCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQI 142 (202)
T ss_dssp TCCCSCSSCEEECTT-------CHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CCCCCCceeEEECCc-------hHHHHHcCCccCCCCceeeEEEEECCCCEEEEE
Confidence 44554433221 3455668998 99999999999999875
No 64
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.55 E-value=2.5e-07 Score=88.04 Aligned_cols=105 Identities=13% Similarity=0.119 Sum_probs=78.0
Q ss_pred CCCCceeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
+.+|..|.+++++||.|+|+|- +.||++|. ++.|.++|++++. .+++||.|++ | +.++.++|-+-
T Consensus 43 ~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-D-----~~~~~~~~~~~ 110 (220)
T 1zye_A 43 SGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHD------VNCEVVAVSV-D-----SHFSHLAWINT 110 (220)
T ss_dssp SSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHH------TTEEEEEEES-S-----CHHHHHHHHTS
T ss_pred CCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHHHHHHH
Confidence 4578899999999999999999 99999887 6679999999962 3599999986 3 13334445432
Q ss_pred h-c-----CCCceeecCCCCCCHHHHHHHHHhhCCC------CCcEEEEeCCCCceecc
Q 009735 231 Q-Y-----MMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 231 ~-~-----~MPWyAVpf~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 277 (527)
. . .++|..+.-++ +.+.+.|++. .+|.++++|++|+++..
T Consensus 111 ~~~~~g~~~~~fp~l~D~~-------~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~ 162 (220)
T 1zye_A 111 PRKNGGLGHMNIALLSDLT-------KQISRDYGVLLEGPGLALRGLFIIDPNGVIKHL 162 (220)
T ss_dssp CGGGTCCCSCSSEEEECTT-------SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHHhCCCcCCceEEEECCc-------HHHHHHhCCeecCCCcccceEEEECCCCEEEEE
Confidence 2 1 44554332221 4556778998 99999999999999864
No 65
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.52 E-value=6e-07 Score=82.03 Aligned_cols=115 Identities=10% Similarity=0.118 Sum_probs=78.9
Q ss_pred CCCCceeecccccCcEEEEEEecCCCC-hhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVS-NEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~-~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
..+|+.|.+++|+||.|+|+|-..||+ +|- +..|.++|+.++ +.+.++.+|+|++ |+... |-+.-++|-+.
T Consensus 19 d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~----~~~~~v~~v~isv-Dp~~D-tp~~l~~y~~~ 92 (170)
T 4hde_A 19 NQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAK----EEKLDVQFVSFSV-DPDLD-KPENLKAFIQK 92 (170)
T ss_dssp CTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHH----HTTCCCEEEEEES-CTTTC-CHHHHHHHHTT
T ss_pred CCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhh----cccccceeEeeec-Ccccc-cHHHHHHHHHH
Confidence 467889999999999999999999985 454 677999999997 3466899999986 53110 11233556544
Q ss_pred hc--CCCceeecCCCCCCHHHHHHHHHhhC----------CCCCcEEEEeCCCCceec
Q 009735 231 QY--MMPWFSVHHPSAIDPAVIRYAKEKWD----------FRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 231 ~~--~MPWyAVpf~~~i~~~~~r~ike~~~----------~~~iP~LVvL~pqGkv~~ 276 (527)
+. ...|..+--++ .....+..+..|. +..-|.++++||+|+++.
T Consensus 93 ~~~~~~~~~~ltg~~--~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~ 148 (170)
T 4hde_A 93 FTEDTSNWNLLTGYS--LEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMK 148 (170)
T ss_dssp TCSCCTTEEEEBCSC--HHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEE
T ss_pred cCCCCCCceecCccc--HHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEE
Confidence 32 24587666543 2234444444443 334579999999999974
No 66
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.52 E-value=2.8e-07 Score=87.32 Aligned_cols=104 Identities=12% Similarity=0.060 Sum_probs=75.5
Q ss_pred CCceeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc
Q 009735 156 TKRKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 232 (527)
Q Consensus 156 ~~~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~ 232 (527)
+|+.|++++++||.|+|+|- +.||++|. ++.|.++|++++. .+++||.|++ | +.+..++|-+-+.
T Consensus 37 ~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~------~~v~vv~Is~-D-----~~~~~~~~~~~~~ 104 (211)
T 2pn8_A 37 EFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS------INTEVVACSV-D-----SQFTHLAWINTPR 104 (211)
T ss_dssp EEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S-----CHHHHHHHHTSCG
T ss_pred CCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHHHHHHHhh
Confidence 35799999999999999998 99999887 6679999999962 4699999996 3 2333455654331
Q ss_pred ------CCCceeecCCCCCCHHHHHHHHHhhCCC------CCcEEEEeCCCCceeccc
Q 009735 233 ------MMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 233 ------~MPWyAVpf~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~n 278 (527)
.++|..+- |.. +.+.+.|++. ..|..+++|++|+++...
T Consensus 105 ~~~g~~~~~fp~l~-----D~~--~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~ 155 (211)
T 2pn8_A 105 RQGGLGPIRIPLLS-----DLT--HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQIT 155 (211)
T ss_dssp GGTCCCSCSSCEEE-----CTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred hccCccCCceEEEE-----CCc--hHHHHHcCCcccCCCcccceEEEECCCCEEEEEE
Confidence 34443332 221 3455667874 599999999999998653
No 67
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.52 E-value=6.2e-07 Score=83.91 Aligned_cols=153 Identities=12% Similarity=0.101 Sum_probs=96.1
Q ss_pred ccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 165 LRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
.+||.|+++|.|.||++|. .+.|.+++++++ ..+.++.++-|-. |++
T Consensus 30 ~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~~~~~vd~--------~~~------------------- 78 (241)
T 3idv_A 30 ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILK----DKDPPIPVAKIDA--------TSA------------------- 78 (241)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHH----TSSSCCCEEEEET--------TTC-------------------
T ss_pred hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHh----hcCCceEEEEEec--------cCC-------------------
Confidence 4689999999999999998 567999999986 2334456655532 211
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecccHHHHHHHhCCccccCChhhHHHhhhhc---ccce--eeccccCC
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWKEE---TWRI--DLLADSVD 317 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L~~~e---~w~l--elL~d~id 317 (527)
+.+.+.|++++.|++++++ +|+.+... | +.+.+.+.+.-++. .|.. +.+..-.+
T Consensus 79 --------~~l~~~~~v~~~Pt~~~~~-~g~~~~~~--------g----~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 137 (241)
T 3idv_A 79 --------SVLASRFDVSGYPTIKILK-KGQAVDYE--------G----SRTQEEIVAKVREVSQPDWTPPPEVTLVLTK 137 (241)
T ss_dssp --------HHHHHHTTCCSSSEEEEEE-TTEEEECC--------S----CSCHHHHHHHHHHHHSTTCCCCCCSSEECCT
T ss_pred --------HHHHHhcCCCcCCEEEEEc-CCCccccc--------C----cccHHHHHHHHhhccCcccccccccceeccH
Confidence 2366788999999999996 57665322 1 23333333322221 1211 11111011
Q ss_pred CCccccccCceEEEEEccCCh-hHHHHHHHHHHHHHHHh---CCceeEEEeccCCc
Q 009735 318 PVIPTWIMEQKHICLYGGEDL-EWVRKFTALMGAVARAA---GIALEMLYVGKSNP 369 (527)
Q Consensus 318 ~~I~~~i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~---~~~~E~v~Vgkd~~ 369 (527)
..+...+..++.++++|.+.+ ..|+.+.+.+.++++.. +..+.++.|..+..
T Consensus 138 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~ 193 (241)
T 3idv_A 138 ENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAE 193 (241)
T ss_dssp TTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTC
T ss_pred HHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCC
Confidence 233344668899999999942 44599999999987753 33477777776643
No 68
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.51 E-value=4.5e-07 Score=88.07 Aligned_cols=113 Identities=12% Similarity=0.064 Sum_probs=81.7
Q ss_pred CCCCcccc-----CCCCceeecccccCcEEEEEEec-CCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCC
Q 009735 146 DDQLPLVE-----CPTKRKVSIDVLRRKSVLLLVSD-LDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRST 217 (527)
Q Consensus 146 ~~~~pl~d-----g~~~~kV~Is~L~gK~VlLyfSa-l~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~ 217 (527)
|+..|-|. ..+|+.|++++++||.|+|+|-+ .||++|. ++.|.++|++++. .+++||.||. |
T Consensus 51 G~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~------~gv~vv~Is~-D--- 120 (240)
T 3qpm_A 51 SKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRA------INTEVVACSV-D--- 120 (240)
T ss_dssp TSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHT------TTEEEEEEES-S---
T ss_pred CCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEEC-C---
Confidence 44456665 33466999999999999999988 8999887 6679999999962 3599999995 3
Q ss_pred CcchhhHHHHHHhh------cCCCceeecCCCCCCHHHHHHHHHhhCCC------CCcEEEEeCCCCceecc
Q 009735 218 PWTEAKEHKFEALQ------YMMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 218 ~w~D~~~~~F~~~~------~~MPWyAVpf~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 277 (527)
+.+...+|-.-. ..+||..+.-++ +.+.+.|++. ..|..+++||+|+++..
T Consensus 121 --~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~-------~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~ 183 (240)
T 3qpm_A 121 --SQFTHLAWIITPRKQGGLGPMKIPLLSDLT-------HQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQI 183 (240)
T ss_dssp --CHHHHHHHHHSCGGGTCCCSCSSCEEECTT-------SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred --CHHHHHHHHHHHHhhcCCCCCceeEEeCch-------HHHHHHhCCccccCCCccceEEEEcCCCeEEEE
Confidence 234445665432 145655443322 3456677886 58999999999999865
No 69
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.51 E-value=4.8e-07 Score=82.90 Aligned_cols=103 Identities=13% Similarity=0.116 Sum_probs=74.1
Q ss_pred CCCceeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 155 PTKRKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
.+|+.|+++.++||.|+|+|- +.||++|. ++.|.++|++++. .+++||.|+. | +.++.++|-.-+
T Consensus 39 ~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~------~~~~vv~Vs~-D-----~~~~~~~~~~~~ 106 (179)
T 3ixr_A 39 SGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQ------INATVLGVSR-D-----SVKSHDSFCAKQ 106 (179)
T ss_dssp GGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHT------TTEEEEEEES-C-----CHHHHHHHHHHH
T ss_pred CCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEcC-C-----CHHHHHHHHHHc
Confidence 467899999999998887775 99998886 6679999999962 3699999985 3 245566665432
Q ss_pred cCCCceeecCCCCCCHHHHHHHHHhhCCCC------------CcEEEEeCCCCceecc
Q 009735 232 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRK------------KPILVVLDPQGRVVNQ 277 (527)
Q Consensus 232 ~~MPWyAVpf~~~i~~~~~r~ike~~~~~~------------iP~LVvL~pqGkv~~~ 277 (527)
.++|..+.-++ ..+.+.|++.. .|..+++||+|+++..
T Consensus 107 -~~~f~~l~D~~-------~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~ 156 (179)
T 3ixr_A 107 -GFTFPLVSDSD-------AILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEA 156 (179)
T ss_dssp -TCCSCEEECTT-------CHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEE
T ss_pred -CCceEEEECCc-------hHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEE
Confidence 44544333222 23445566643 6999999999999864
No 70
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.50 E-value=3.4e-07 Score=86.88 Aligned_cols=103 Identities=12% Similarity=0.121 Sum_probs=78.2
Q ss_pred CC--ceeecccc-cCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHH
Q 009735 156 TK--RKVSIDVL-RRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 229 (527)
Q Consensus 156 ~~--~kV~Is~L-~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~ 229 (527)
+| +.|+++++ +||.|+|+|- +.||++|. ++.|.++|++++. .+++||.|++ | +.+..++|-+
T Consensus 38 ~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-D-----~~~~~~~~~~ 105 (213)
T 2i81_A 38 DNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHE------RNVELLGCSV-D-----SKYTHLAWKK 105 (213)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHH------TTEEEEEEES-S-----CHHHHHHHHS
T ss_pred CCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEeC-C-----CHHHHHHHHH
Confidence 56 79999999 9999999999 99999987 5679999999962 3699999986 3 2334445544
Q ss_pred hhc------CCCceeecCCCCCCHHHHHHHHHhhCCC-----CCcEEEEeCCCCceecc
Q 009735 230 LQY------MMPWFSVHHPSAIDPAVIRYAKEKWDFR-----KKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 230 ~~~------~MPWyAVpf~~~i~~~~~r~ike~~~~~-----~iP~LVvL~pqGkv~~~ 277 (527)
-.. .+||..+--++ +.+.+.|++. ..|..+++|++|+++..
T Consensus 106 ~~~~~~g~~~~~fp~l~D~~-------~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~ 157 (213)
T 2i81_A 106 TPLAKGGIGNIKHTLLSDIT-------KSISKDYNVLFDDSVSLRAFVLIDMNGIVQHL 157 (213)
T ss_dssp SCGGGTCCCSCSSEEEECTT-------SHHHHHTTCEETTTEECEEEEEECTTSBEEEE
T ss_pred HHHhhCCccCCCceEEECCc-------hHHHHHhCCccccCCcccEEEEECCCCEEEEE
Confidence 332 56665443222 3466778998 89999999999999865
No 71
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.50 E-value=6.9e-07 Score=84.61 Aligned_cols=130 Identities=11% Similarity=0.062 Sum_probs=81.9
Q ss_pred hcccCCCCCccccC--CC-CceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCC
Q 009735 141 LIHTKDDQLPLVEC--PT-KRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDR 215 (527)
Q Consensus 141 LI~~k~~~~pl~dg--~~-~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~ 215 (527)
+-+......|-|.- .+ |+.|+++.++||.|+|+|-|.||++|. ++.|.++|++.+. .+++||-||+ |.
T Consensus 18 ~~~~~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~------~g~~vv~v~~-d~ 90 (208)
T 2f8a_A 18 LYFQSMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGP------RGLVVLGFPC-NQ 90 (208)
T ss_dssp ----CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEEC-CC
T ss_pred cchhhcCccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccC------CCeEEEEEEC-Cc
Confidence 34444444454432 34 889999999999999999999999987 6789999999862 2599999986 21
Q ss_pred ---CCCcchhhHHHHHHh-----hcCCCceeecCCC---CCCHHHHHHHHHhhC-------------------------C
Q 009735 216 ---STPWTEAKEHKFEAL-----QYMMPWFSVHHPS---AIDPAVIRYAKEKWD-------------------------F 259 (527)
Q Consensus 216 ---s~~w~D~~~~~F~~~-----~~~MPWyAVpf~~---~i~~~~~r~ike~~~-------------------------~ 259 (527)
..+-+.++-.+|-.+ ....++-.+.-.+ ....+..+++++.+. +
T Consensus 91 ~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 170 (208)
T 2f8a_A 91 FGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDV 170 (208)
T ss_dssp STTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCC
T ss_pred ccccCCCCHHHHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCcc
Confidence 011123445566542 2333332221000 001245667765442 4
Q ss_pred CCCcEEEEeCCCCceecc
Q 009735 260 RKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 260 ~~iP~LVvL~pqGkv~~~ 277 (527)
+..|+.+++|++|+++..
T Consensus 171 ~~~p~tflID~~G~i~~~ 188 (208)
T 2f8a_A 171 AWNFEKFLVGPDGVPLRR 188 (208)
T ss_dssp CSTTCEEEECTTSCEEEE
T ss_pred ccCceEEEEcCCCcEEEE
Confidence 566999999999999864
No 72
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.48 E-value=8.6e-07 Score=80.89 Aligned_cols=112 Identities=16% Similarity=0.237 Sum_probs=72.2
Q ss_pred CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCC--CC-cchhhHHHHH
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRS--TP-WTEAKEHKFE 228 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s--~~-w~D~~~~~F~ 228 (527)
..+|+.+.+++++||.|+|+|.+.||++|. ++.|.++|++++. .+++||.|++ |.. .+ =+.+.-.+|-
T Consensus 36 ~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~------~~v~vv~vs~-d~~~~~e~~~~~~~~~~~ 108 (181)
T 2p31_A 36 NIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGP------HHFNVLAFPC-NQFGQQEPDSNKEIESFA 108 (181)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEEC-CCSTTCCCSCHHHHHHHH
T ss_pred cCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhc------CCEEEEEEEC-cCCCCCCCCCHHHHHHHH
Confidence 356789999999999999999999999987 6789999999962 2599999986 210 00 0233344454
Q ss_pred H--hhcCCCcee-ecCCCCCCHHHHHHHHHhhCCCCCc-------EEEEeCCCCceecc
Q 009735 229 A--LQYMMPWFS-VHHPSAIDPAVIRYAKEKWDFRKKP-------ILVVLDPQGRVVNQ 277 (527)
Q Consensus 229 ~--~~~~MPWyA-Vpf~~~i~~~~~r~ike~~~~~~iP-------~LVvL~pqGkv~~~ 277 (527)
. +.-..|.++ +........+..++ .+.+.| ..+++|++|+++..
T Consensus 109 ~~~~~~~~p~~~~~d~~g~~~~~~~~~-----~~~~~P~~~~~~~~~~lid~~G~i~~~ 162 (181)
T 2p31_A 109 RRTYSVSFPMFSKIAVTGTGAHPAFKY-----LAQTSGKEPTWNFWKYLVAPDGKVVGA 162 (181)
T ss_dssp HHHHCCCSCBBCCCCCSSTTSCHHHHH-----HHHHHSCCCCSTTCEEEECTTSCEEEE
T ss_pred HhhcCCCceeEeecccCCccchhhhhh-----hhhcCCCccccceeEEEEcCCCCEEEE
Confidence 3 333344333 11111001112222 234567 99999999999864
No 73
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.45 E-value=1.7e-07 Score=81.56 Aligned_cols=99 Identities=16% Similarity=0.159 Sum_probs=69.3
Q ss_pred ceeecccccCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCC
Q 009735 158 RKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMP 235 (527)
Q Consensus 158 ~kV~Is~L~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MP 235 (527)
+.+.++.++||.++|+|.+.||++|.. +.|.++|++ .++++|.|++-+ +.+.-++|-.-+ .++
T Consensus 33 ~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---------~~v~~v~v~~~~-----~~~~~~~~~~~~-~~~ 97 (156)
T 1kng_A 33 PGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---------KRFQLVGINYKD-----AADNARRFLGRY-GNP 97 (156)
T ss_dssp CCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---------TTSEEEEEEESC-----CHHHHHHHHHHH-CCC
T ss_pred ceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---------CCeEEEEEECCC-----CHHHHHHHHHHc-CCC
Confidence 789999999999999999999999963 345444322 469999998621 233344443322 456
Q ss_pred ceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 236 WFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 236 WyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
|..+-... ...+.+.|++.+.|+.+++|++|+++..
T Consensus 98 ~~~~~~d~------~~~~~~~~~v~~~P~~~~id~~G~i~~~ 133 (156)
T 1kng_A 98 FGRVGVDA------NGRASIEWGVYGVPETFVVGREGTIVYK 133 (156)
T ss_dssp CSEEEEET------TSHHHHHTTCCSSCEEEEECTTSBEEEE
T ss_pred CceeeeCc------hhHHHHhcCcCccCeEEEEcCCCCEEEE
Confidence 65433321 1345677899999999999999998763
No 74
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.44 E-value=2.4e-07 Score=95.63 Aligned_cols=117 Identities=16% Similarity=0.134 Sum_probs=79.6
Q ss_pred CCCcccc-------CCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCC
Q 009735 147 DQLPLVE-------CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRST 217 (527)
Q Consensus 147 ~~~pl~d-------g~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~ 217 (527)
+..|-|. ..+|+.+.++.++||.|+|+|.+.||++|. ++.|.++|++.+. .+++||-|++-+...
T Consensus 55 ~~aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~------~~v~vi~Vs~d~~~~ 128 (352)
T 2hyx_A 55 GTAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKD------SGLAVIGVHTPEYAF 128 (352)
T ss_dssp CBCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEECCSSGG
T ss_pred CcCCCccccccccCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhc------CCeEEEEEECCcccc
Confidence 3456565 356778999999999999999999999997 6679999999852 359999998511000
Q ss_pred CcchhhHHHHHHhhcCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 218 PWTEAKEHKFEALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 218 ~w~D~~~~~F~~~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
.=+.++-++|-.- ..++|-.+- |.. ..+.+.|++.++|+++++|++|+++..
T Consensus 129 ~d~~~~~~~~~~~-~~l~fpv~~-----D~~--~~l~~~ygV~~~Pt~~lID~~G~Iv~~ 180 (352)
T 2hyx_A 129 EKVPGNVAKGAAN-LGISYPIAL-----DNN--YATWTNYRNRYWPAEYLIDATGTVRHI 180 (352)
T ss_dssp GGCHHHHHHHHHH-HTCCSCEEE-----CTT--SHHHHHTTCCEESEEEEECTTSBEEEE
T ss_pred cCCHHHHHHHHHH-cCCCccEEe-----CCc--HHHHHHcCCCccCEEEEEeCCCeEEEE
Confidence 0012223334322 234443222 111 345667899999999999999999865
No 75
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.44 E-value=2.6e-07 Score=82.11 Aligned_cols=100 Identities=18% Similarity=0.088 Sum_probs=69.5
Q ss_pred CCceeecccc-cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc
Q 009735 156 TKRKVSIDVL-RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 232 (527)
Q Consensus 156 ~~~kV~Is~L-~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~ 232 (527)
+|..+..+.+ +||.|+|+|.+.||++|. .+.|.+++++ ++++|.|++-+ +.+...+|-.-+
T Consensus 39 ~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----------~v~vv~v~~~~-----~~~~~~~~~~~~- 102 (168)
T 2b1k_A 39 PGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----------GIRVVGMNYKD-----DRQKAISWLKEL- 102 (168)
T ss_dssp TTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----------TCCEEEEEESC-----CHHHHHHHHHHH-
T ss_pred CCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----------CCEEEEEECCC-----ChHHHHHHHHHc-
Confidence 6778888885 999999999999999997 4456555432 58999998622 233344454322
Q ss_pred CCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 233 MMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 233 ~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
..||..+-... . ..+.+.|++.+.|+.+++|++|+++..
T Consensus 103 ~~~~~~~~~d~----~--~~~~~~~~v~~~P~~~lid~~G~i~~~ 141 (168)
T 2b1k_A 103 GNPYALSLFDG----D--GMLGLDLGVYGAPETFLIDGNGIIRYR 141 (168)
T ss_dssp CCCCSEEEEET----T--CHHHHHHTCCSSSEEEEECTTSBEEEE
T ss_pred CCCCceeeECc----c--hHHHHHcCccccCEEEEECCCCeEEEE
Confidence 45654322211 1 335677899999999999999999853
No 76
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.41 E-value=1.9e-07 Score=83.40 Aligned_cols=103 Identities=12% Similarity=0.065 Sum_probs=72.5
Q ss_pred CCCCceeecccccCcEEEEEEecCC-CChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLD-VSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~-~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
..+|+.+++++++||.|+|+|-+.| |++|. ++.|.++|+++ .+++||.|++ | +.+..++|-+-
T Consensus 31 ~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--------~~~~vv~is~-d-----~~~~~~~~~~~ 96 (167)
T 2jsy_A 31 TNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--------GDVNVYTISA-D-----LPFAQARWCGA 96 (167)
T ss_dssp BTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--------SSCEEEEEEC-S-----SGGGTSCCGGG
T ss_pred CCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--------CCCEEEEEEC-C-----CHHHHHHHHHh
Confidence 4678899999999999999999999 88887 67799999987 2599999986 3 12222233322
Q ss_pred hcCC-CceeecC-CCCCCHHHHHHHHHhhCCCC------CcEEEEeCCCCceeccc
Q 009735 231 QYMM-PWFSVHH-PSAIDPAVIRYAKEKWDFRK------KPILVVLDPQGRVVNQN 278 (527)
Q Consensus 231 ~~~M-PWyAVpf-~~~i~~~~~r~ike~~~~~~------iP~LVvL~pqGkv~~~n 278 (527)
+ .+ +|..+.- ++ ..+.+.|++.. .|..+++|++|+++...
T Consensus 97 ~-~~~~~~~~~d~~~-------~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~ 144 (167)
T 2jsy_A 97 N-GIDKVETLSDHRD-------MSFGEAFGVYIKELRLLARSVFVLDENGKVVYAE 144 (167)
T ss_dssp S-SCTTEEEEEGGGT-------CHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEE
T ss_pred c-CCCCceEeeCCch-------hHHHHHhCCccccCCceeeEEEEEcCCCcEEEEE
Confidence 1 22 3332221 11 23456678876 39999999999998654
No 77
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.40 E-value=1.6e-06 Score=77.60 Aligned_cols=103 Identities=11% Similarity=0.063 Sum_probs=73.0
Q ss_pred CCCCceeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
..+|+.|++++++||.|+|+|= +.||++|. ++.|.++|+++ .+++||.|+. | +.+..++|-+-
T Consensus 29 ~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--------~~v~vv~is~-d-----~~~~~~~~~~~ 94 (163)
T 1psq_A 29 TTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--------DNTVVLTVSM-D-----LPFAQKRWCGA 94 (163)
T ss_dssp CTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--------TTEEEEEEES-S-----CHHHHHHHHHH
T ss_pred cCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--------CCcEEEEEEC-C-----CHHHHHHHHHh
Confidence 4578899999999999999996 58998887 55688877765 3699999985 3 23445567554
Q ss_pred hcCC-CceeecC-CCCCCHHHHHHHHHhhCCC----CC--cEEEEeCCCCceeccc
Q 009735 231 QYMM-PWFSVHH-PSAIDPAVIRYAKEKWDFR----KK--PILVVLDPQGRVVNQN 278 (527)
Q Consensus 231 ~~~M-PWyAVpf-~~~i~~~~~r~ike~~~~~----~i--P~LVvL~pqGkv~~~n 278 (527)
+ .. +|..+.- ++ ..+.+.|++. |. |..+++|++|+++...
T Consensus 95 ~-~~~~~~~l~D~~~-------~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~ 142 (163)
T 1psq_A 95 E-GLDNAIMLSDYFD-------HSFGRDYALLINEWHLLARAVFVLDTDNTIRYVE 142 (163)
T ss_dssp H-TCTTSEEEECTTT-------CHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEE
T ss_pred c-CCCCcEEecCCch-------hHHHHHhCCccccCCceEEEEEEEcCCCeEEEEE
Confidence 3 34 4533322 21 2345567776 44 9999999999998653
No 78
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.38 E-value=1.2e-06 Score=80.88 Aligned_cols=102 Identities=14% Similarity=0.111 Sum_probs=74.1
Q ss_pred ceeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc--
Q 009735 158 RKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY-- 232 (527)
Q Consensus 158 ~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~-- 232 (527)
+.|++++++||.|+|+|= +.||++|. ++.|.++|++++. .+++||.|+. | +.+..++|-+-+.
T Consensus 21 ~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~------~~v~vv~Is~-d-----~~~~~~~~~~~~~~~ 88 (186)
T 1n8j_A 21 IEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQK------LGVDVYSVST-D-----THFTHKAWHSSSETI 88 (186)
T ss_dssp EEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHH------TTEEEEEEES-S-----CHHHHHHHHHHCTTG
T ss_pred eEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHHHHHHHcCcc
Confidence 799999999999999885 68999887 6679999999962 3599999995 3 2344556655432
Q ss_pred -CCCceeecCCCCCCHHHHHHHHHhhCCC----C--CcEEEEeCCCCceeccc
Q 009735 233 -MMPWFSVHHPSAIDPAVIRYAKEKWDFR----K--KPILVVLDPQGRVVNQN 278 (527)
Q Consensus 233 -~MPWyAVpf~~~i~~~~~r~ike~~~~~----~--iP~LVvL~pqGkv~~~n 278 (527)
.++|..+.-++ ..+.+.|++. + .|..+++|++|+++...
T Consensus 89 ~~~~fp~l~D~~-------~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~ 134 (186)
T 1n8j_A 89 AKIKYAMIGDPT-------GALTRNFDNMREDEGLADRATFVVDPQGIIQAIE 134 (186)
T ss_dssp GGCCSEEEECTT-------SHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred cCCceeEEECCc-------hHHHHHhCCccCCCCceeeEEEEECCCCeEEEEE
Confidence 45554443221 2344567776 3 79999999999998653
No 79
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.35 E-value=1.4e-06 Score=78.31 Aligned_cols=102 Identities=14% Similarity=0.101 Sum_probs=72.7
Q ss_pred CCCCceeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
..+|+.|++++++||.|+|+|= +.||++|. ++.|.++|++ .+++||.||. | +.+..++|-+-
T Consensus 33 ~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---------~~~~vv~is~-d-----~~~~~~~~~~~ 97 (166)
T 3p7x_A 33 DNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---------EEGIVLTISA-D-----LPFAQKRWCAS 97 (166)
T ss_dssp CTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---------TTSEEEEEES-S-----CHHHHHHHHHH
T ss_pred cCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---------CCCEEEEEEC-C-----CHHHHHHHHHH
Confidence 4568899999999998888776 78998886 5567777655 4699999995 3 35556677654
Q ss_pred hcCC-CceeecCCCCCCHHHHHHHHHhhCCCC------CcEEEEeCCCCceecc
Q 009735 231 QYMM-PWFSVHHPSAIDPAVIRYAKEKWDFRK------KPILVVLDPQGRVVNQ 277 (527)
Q Consensus 231 ~~~M-PWyAVpf~~~i~~~~~r~ike~~~~~~------iP~LVvL~pqGkv~~~ 277 (527)
+ .+ +|..+--+. . ..+.+.|++.. .|..+++|++|+++..
T Consensus 98 ~-~~~~~~~l~D~~----~--~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~ 144 (166)
T 3p7x_A 98 A-GLDNVITLSDHR----D--LSFGENYGVVMEELRLLARAVFVLDADNKVVYK 144 (166)
T ss_dssp H-TCSSCEEEECTT----T--CHHHHHHTCEETTTTEECCEEEEECTTCBEEEE
T ss_pred c-CCCceEEccCCc----h--hHHHHHhCCccccCCceeeEEEEECCCCeEEEE
Confidence 3 34 444443220 1 13456678775 8999999999999864
No 80
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.35 E-value=5.1e-07 Score=82.17 Aligned_cols=102 Identities=16% Similarity=0.097 Sum_probs=70.0
Q ss_pred CCCCceeecccccCcEEEEEEecCC-CChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLD-VSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~-~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
..+|+.+.+++++||.|+|+|-+.| |++|. ++.|.++|++ + +++||.|++ | +.+..++|-.-
T Consensus 31 ~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~--------~v~vv~Is~-D-----~~~~~~~~~~~ 95 (175)
T 1xvq_A 31 GGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S--------GATVLCVSK-D-----LPFAQKRFCGA 95 (175)
T ss_dssp CTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T--------TCEEEEEES-S-----CHHHHTTCC--
T ss_pred CCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c--------CCEEEEEEC-C-----CHHHHHHHHHH
Confidence 4578899999999999999999998 77776 6679998887 2 489999986 3 12222233221
Q ss_pred hcCC-CceeecCCCCCCHHHHHHHHHhhCCCCC---------cEEEEeCCCCceeccc
Q 009735 231 QYMM-PWFSVHHPSAIDPAVIRYAKEKWDFRKK---------PILVVLDPQGRVVNQN 278 (527)
Q Consensus 231 ~~~M-PWyAVpf~~~i~~~~~r~ike~~~~~~i---------P~LVvL~pqGkv~~~n 278 (527)
+ .+ +|..+.-+ . +.+.+.|++... |..+++|++|+++...
T Consensus 96 ~-~~~~~~~l~D~-----~--~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~ 145 (175)
T 1xvq_A 96 E-GTENVMPASAF-----R--DSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTE 145 (175)
T ss_dssp -----CEEEEECT-----T--SSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEE
T ss_pred c-CCCCceEeeCC-----H--HHHHHHhCCcccccccCCcccceEEEECCCCeEEEEE
Confidence 1 22 33322221 1 345567788776 9999999999998654
No 81
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.33 E-value=6.7e-07 Score=80.40 Aligned_cols=104 Identities=15% Similarity=0.195 Sum_probs=70.7
Q ss_pred CCCCceeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
..+|+.|++++++||.|+|+|= +.||++|. ++.|.+.|++.+ ..++++|-|+. | +.+..++|.+-
T Consensus 17 ~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~------~~~~~~v~vs~-d-----~~~~~~~~~~~ 84 (157)
T 4g2e_A 17 DTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFN------QVNAVVLGISV-D-----PPFSNKAFKEH 84 (157)
T ss_dssp BTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGG------GCSSEEEEEES-S-----CHHHHHHHHHH
T ss_pred CCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhccccccccc------ccCceEeeecc-c-----chhHHHHHHHH
Confidence 4678899999999999999886 99999986 556888888875 34689999985 3 24455667542
Q ss_pred hcCCCceeecCCCCCCHHHHHHHHHhhCCC-----------CCcEEEEeCCCCceecc
Q 009735 231 QYMMPWFSVHHPSAIDPAVIRYAKEKWDFR-----------KKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 231 ~~~MPWyAVpf~~~i~~~~~r~ike~~~~~-----------~iP~LVvL~pqGkv~~~ 277 (527)
..+||-.+--++ +.+.+.|++. ..|+..|+|++|++...
T Consensus 85 -~~~~~p~l~D~~-------~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~ 134 (157)
T 4g2e_A 85 -NKLNFTILSDYN-------REVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYK 134 (157)
T ss_dssp -TTCCSEEEECTT-------SHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEE
T ss_pred -cCCcEEEEEcCC-------cHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEE
Confidence 355665443222 2344555552 35788999999999743
No 82
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.32 E-value=2.3e-06 Score=75.99 Aligned_cols=103 Identities=17% Similarity=0.267 Sum_probs=73.8
Q ss_pred CCCCceeecccccCc--EEEEEE-ecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHH
Q 009735 154 CPTKRKVSIDVLRRK--SVLLLV-SDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFE 228 (527)
Q Consensus 154 g~~~~kV~Is~L~gK--~VlLyf-Sal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~ 228 (527)
..+|+.|++++++|| .|+|+| .+.||++|. ++.|.++|++++ .. . +||.|+. | +.+..++|-
T Consensus 20 ~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~-----~~-~-~vv~is~-d-----~~~~~~~~~ 86 (159)
T 2a4v_A 20 NEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELK-----EY-A-AVFGLSA-D-----SVTSQKKFQ 86 (159)
T ss_dssp CTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHT-----TT-C-EEEEEES-C-----CHHHHHHHH
T ss_pred CCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHH-----hC-C-cEEEEeC-C-----CHHHHHHHH
Confidence 457889999999998 788886 699999887 667999999995 22 3 9999985 3 233455565
Q ss_pred HhhcCCCceeecCCCCCCHHHHHHHHHhhCCCCCc------EEEEeCCCCceeccc
Q 009735 229 ALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKP------ILVVLDPQGRVVNQN 278 (527)
Q Consensus 229 ~~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP------~LVvL~pqGkv~~~n 278 (527)
+-+ .++|..+--++ ..+.+.|++...| ..+++ ++|+++...
T Consensus 87 ~~~-~~~~~~l~D~~-------~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~ 133 (159)
T 2a4v_A 87 SKQ-NLPYHLLSDPK-------REFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFKR 133 (159)
T ss_dssp HHH-TCSSEEEECTT-------CHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEEE
T ss_pred HHh-CCCceEEECCc-------cHHHHHhCCcccccCCccceEEEE-cCCEEEEEE
Confidence 433 35554443221 2355778999988 77778 999998653
No 83
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.30 E-value=5.4e-06 Score=79.57 Aligned_cols=116 Identities=14% Similarity=0.105 Sum_probs=76.3
Q ss_pred CC-CceeecccccCcEEEEEEecCCCChhH-HHHHHHHHHHHhhhccCCCCCeEEEEEeccCC---CCCcchhhHHHHHH
Q 009735 155 PT-KRKVSIDVLRRKSVLLLVSDLDVSNEE-LFLLEQMYRESRQLSSRTESQYEVVWLPIVDR---STPWTEAKEHKFEA 229 (527)
Q Consensus 155 ~~-~~kV~Is~L~gK~VlLyfSal~~~~~~-~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~---s~~w~D~~~~~F~~ 229 (527)
.+ |+.|++++++||.|+|+|-|.||++|. .+.|.++|++.+. .+++||-||. |. ..+-+.++-++|-.
T Consensus 43 ~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~e~p~L~~l~~~~~~------~g~~Vlgvs~-d~f~~~e~~~~~~i~~f~~ 115 (215)
T 2i3y_A 43 LNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNALQEELKP------YGLVVLGFPC-NQFGKQEPGDNKEILPGLK 115 (215)
T ss_dssp SSSSCEEEGGGGTTSEEEEEEECSSSGGGGGHHHHHHHHHHHGG------GTEEEEEEEC-CCSTTCCCSCHHHHHHHHH
T ss_pred CCCCCEEcHHHhCCCEEEEEEeCCCCCChHhHHHHHHHHHHhcc------CCeEEEEEEc-cccCcCCCCCHHHHHHHHH
Confidence 45 889999999999999999999998886 6779999999962 3599999995 21 11223344566755
Q ss_pred h-----hc--CCCceeecCC-CCCCHHHHHHHHHhhC---------------------CCCCcEEEEeCCCCceecc
Q 009735 230 L-----QY--MMPWFSVHHP-SAIDPAVIRYAKEKWD---------------------FRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 230 ~-----~~--~MPWyAVpf~-~~i~~~~~r~ike~~~---------------------~~~iP~LVvL~pqGkv~~~ 277 (527)
+ .. ..|.++-.-. .....++.+++++... ++..|+-.++|++|+++..
T Consensus 116 ~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~ 192 (215)
T 2i3y_A 116 YVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMR 192 (215)
T ss_dssp HTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred hccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEE
Confidence 2 22 3343331110 0001234567765421 1223789999999999865
No 84
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.29 E-value=2.3e-06 Score=77.09 Aligned_cols=102 Identities=12% Similarity=0.130 Sum_probs=71.3
Q ss_pred CCCCceeecccccCcEEEEEE-ecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLV-SDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyf-Sal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
..+|+.+++++++||.|+|+| .+.||++|. ++.|.++|+++ .+++||.|+. | +.+..++|-+-
T Consensus 34 ~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--------~~v~vv~Is~-d-----~~~~~~~~~~~ 99 (171)
T 2yzh_A 34 TKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--------EGVDVTVVSM-D-----LPFAQKRFCES 99 (171)
T ss_dssp ETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--------TTEEEEEEES-S-----CHHHHHHHHHH
T ss_pred CCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--------CCceEEEEeC-C-----CHHHHHHHHHH
Confidence 457889999999999999988 489999887 55688888765 3699999986 3 23344556543
Q ss_pred hcCC-CceeecC-CCCCCHHHHHHHHHhhCCC-------C--CcEEEEeCCCCceeccc
Q 009735 231 QYMM-PWFSVHH-PSAIDPAVIRYAKEKWDFR-------K--KPILVVLDPQGRVVNQN 278 (527)
Q Consensus 231 ~~~M-PWyAVpf-~~~i~~~~~r~ike~~~~~-------~--iP~LVvL~pqGkv~~~n 278 (527)
+ .. +|..+.- ++ +.+ +.|++. + .|..+++|++|+++...
T Consensus 100 ~-~~~~~~~l~D~~~-------~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~ 149 (171)
T 2yzh_A 100 F-NIQNVTVASDFRY-------RDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQ 149 (171)
T ss_dssp T-TCCSSEEEECTTT-------CGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred c-CCCCeEEeecCcc-------CcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEE
Confidence 2 33 4433322 21 224 667764 2 69999999999998653
No 85
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.28 E-value=2.1e-06 Score=84.38 Aligned_cols=113 Identities=12% Similarity=0.047 Sum_probs=79.4
Q ss_pred CCCCcccc-----CCCCceeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCC
Q 009735 146 DDQLPLVE-----CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRST 217 (527)
Q Consensus 146 ~~~~pl~d-----g~~~~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~ 217 (527)
++..|-|. ..+|+.|++++++||.|+|+|= +.||++|. ++.|.++|++++. .+++||.||. |
T Consensus 65 G~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~------~gv~vv~IS~-D--- 134 (254)
T 3tjj_A 65 SKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS------INTEVVACSV-D--- 134 (254)
T ss_dssp TSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHT------TTEEEEEEES-S---
T ss_pred CCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH------cCCEEEEEcC-C---
Confidence 34455555 3457899999999999998886 89987765 6679999999962 3599999995 3
Q ss_pred CcchhhHHHHHHhh------cCCCceeecCCCCCCHHHHHHHHHhhCCC------CCcEEEEeCCCCceecc
Q 009735 218 PWTEAKEHKFEALQ------YMMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 218 ~w~D~~~~~F~~~~------~~MPWyAVpf~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 277 (527)
+.++..+|-+-. ..++|..+.-++ ..+.+.|++. ..|..+|+|++|+++..
T Consensus 135 --~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~-------~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~ 197 (254)
T 3tjj_A 135 --SQFTHLAWINTPRRQGGLGPIRIPLLSDLT-------HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI 197 (254)
T ss_dssp --CHHHHHHHHTSCGGGTSCCSCSSCEEECTT-------SHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred --CHHHHHHHHHHHHHhcCCcccccceeeCcH-------HHHHHHcCCccccCCCccceEEEECCCCeEEEE
Confidence 244445664422 145554443222 3455666774 47999999999999865
No 86
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.27 E-value=6.9e-06 Score=78.11 Aligned_cols=117 Identities=10% Similarity=0.075 Sum_probs=75.2
Q ss_pred CC-CceeecccccCcEEEEEEecCCCChhH-HHHHHHHHHHHhhhccCCCCCeEEEEEeccC--CCCCcchhhHHHHHHh
Q 009735 155 PT-KRKVSIDVLRRKSVLLLVSDLDVSNEE-LFLLEQMYRESRQLSSRTESQYEVVWLPIVD--RSTPWTEAKEHKFEAL 230 (527)
Q Consensus 155 ~~-~~kV~Is~L~gK~VlLyfSal~~~~~~-~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd--~s~~w~D~~~~~F~~~ 230 (527)
.+ |+.|+++.++||.|+|+|-|.||++|. ++.|.++|++.+. .+++||-||.=+ ...+-+.++-++|-.+
T Consensus 25 ~~~G~~v~Ls~~kGKvvll~F~At~C~~c~e~p~L~~l~~~~~~------~g~~vlgvs~d~f~~~e~~~~~~i~~f~~~ 98 (207)
T 2r37_A 25 IDGEEYIPFKQYAGKYVLFVNVASYGGLTGQYIELNALQEELAP------FGLVILGFPCNQFGKQEPGENSEILPTLKY 98 (207)
T ss_dssp TTSSCEEEGGGGTTSEEEEEEECSSSTTTTHHHHHHHHHHHHGG------GTEEEEEEECCCBTTCCCSCHHHHHHHHHH
T ss_pred CCCCCEEcHHHhCCCEEEEEEeCCCCCChHHHHHHHHHHHHhcc------CCEEEEEEECcccCcCCCCCHHHHHHHHHh
Confidence 45 789999999999999999999998874 6779999999962 259999999510 0111223445566552
Q ss_pred -----hcCC--CceeecCCC-CCCHHHHHHHHHhhC---------------------CCCCcEEEEeCCCCceecc
Q 009735 231 -----QYMM--PWFSVHHPS-AIDPAVIRYAKEKWD---------------------FRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 231 -----~~~M--PWyAVpf~~-~i~~~~~r~ike~~~---------------------~~~iP~LVvL~pqGkv~~~ 277 (527)
...+ |.++-.-.+ ....+..+++++... ++..|+-+++|++|+++..
T Consensus 99 ~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~ 174 (207)
T 2r37_A 99 VRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMR 174 (207)
T ss_dssp TSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred cchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEE
Confidence 2333 333211100 001234566765432 1223799999999999864
No 87
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.24 E-value=3.9e-06 Score=72.53 Aligned_cols=80 Identities=9% Similarity=0.058 Sum_probs=61.9
Q ss_pred CCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc
Q 009735 155 PTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 232 (527)
Q Consensus 155 ~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~ 232 (527)
..+..+.++.++||.|+|+|.+.||++|. .+.|.+++++.+ +++.++-|.+ |++.
T Consensus 39 ~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~~-------- 95 (141)
T 3hxs_A 39 YENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYA-------GKIYIYKVNV--------DKEP-------- 95 (141)
T ss_dssp CSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTCH--------
T ss_pred cccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CceEEEEEEC--------CCCH--------
Confidence 34557888899999999999999999998 456888887763 2466766654 2211
Q ss_pred CCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 233 MMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 233 ~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+.+.|++++.|++++++++|+++.
T Consensus 96 -------------------~~~~~~~v~~~Pt~~~~~~~g~~~~ 120 (141)
T 3hxs_A 96 -------------------ELARDFGIQSIPTIWFVPMKGEPQV 120 (141)
T ss_dssp -------------------HHHHHTTCCSSSEEEEECSSSCCEE
T ss_pred -------------------HHHHHcCCCCcCEEEEEeCCCCEEE
Confidence 2567789999999999999999764
No 88
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.24 E-value=2.4e-06 Score=80.21 Aligned_cols=104 Identities=15% Similarity=0.145 Sum_probs=71.7
Q ss_pred CCCCceeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
..+|+.|++++++||.|+|+|= +.||++|. ++.|.++|+++ .+++||.||. | +.+..++|-+-
T Consensus 65 d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--------~~v~vv~Is~-D-----~~~~~~~~~~~ 130 (200)
T 3zrd_A 65 AKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--------ENTVVLCISS-D-----LPFAQSRFCGA 130 (200)
T ss_dssp CTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--------TTEEEEEEES-S-----CHHHHTTCTTT
T ss_pred CCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--------CCCEEEEEEC-C-----CHHHHHHHHHH
Confidence 4678899999999999998886 77988776 66799999876 2599999985 3 23333334332
Q ss_pred hcCC-CceeecCCCCCCHHHHHHHHHhhCCC-------C--CcEEEEeCCCCceeccc
Q 009735 231 QYMM-PWFSVHHPSAIDPAVIRYAKEKWDFR-------K--KPILVVLDPQGRVVNQN 278 (527)
Q Consensus 231 ~~~M-PWyAVpf~~~i~~~~~r~ike~~~~~-------~--iP~LVvL~pqGkv~~~n 278 (527)
+ .+ +|..+.-+ . -..+.+.|++. | .|..+++|++|+++...
T Consensus 131 ~-~~~~f~~l~D~-----~-~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~ 181 (200)
T 3zrd_A 131 E-GLSNVITLSTL-----R-GADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSE 181 (200)
T ss_dssp T-TCTTEEEEETT-----S-CTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred c-CCCCceEEecC-----c-hHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEE
Confidence 2 34 55444322 0 12345566664 3 59999999999998643
No 89
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.20 E-value=4e-06 Score=75.34 Aligned_cols=104 Identities=14% Similarity=0.108 Sum_probs=70.7
Q ss_pred CCCCceeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
..+|+.|++++++||.|+|+|= +.||++|. ++.|.+.|+++ .+++||.|+. | +.+..++|-.-
T Consensus 30 ~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--------~~v~vv~Is~-d-----~~~~~~~~~~~ 95 (165)
T 1q98_A 30 GNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--------SNTIVLCISA-D-----LPFAQARFCGA 95 (165)
T ss_dssp CTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--------TTEEEEEEES-S-----CHHHHTTCTTT
T ss_pred CCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--------CCCEEEEEeC-C-----CHHHHHHHHHH
Confidence 4578899999999999999885 89988876 66799998886 3599999985 3 12223334321
Q ss_pred hcCC-CceeecCCCCCCHHHHHHHHHhhCCCC---------CcEEEEeCCCCceeccc
Q 009735 231 QYMM-PWFSVHHPSAIDPAVIRYAKEKWDFRK---------KPILVVLDPQGRVVNQN 278 (527)
Q Consensus 231 ~~~M-PWyAVpf~~~i~~~~~r~ike~~~~~~---------iP~LVvL~pqGkv~~~n 278 (527)
..+ +|..+--+. + ..+.+.|++.. .|..+++|++|+++...
T Consensus 96 -~~~~~~~~l~D~~--~----~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~ 146 (165)
T 1q98_A 96 -EGIENAKTVSTFR--N----HALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQ 146 (165)
T ss_dssp -TTCTTEEEEECTT--C----THHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred -cCCCceEEeeccc--c----chHHHHhCceecccccCCccceeEEEEcCCCEEEEEE
Confidence 234 443332210 1 23445567642 49999999999998654
No 90
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.13 E-value=1.4e-05 Score=71.78 Aligned_cols=112 Identities=12% Similarity=0.065 Sum_probs=77.3
Q ss_pred CCCCcccc----CCCC--ceeeccc-ccCcEEEEEEe-cCCCChhH---HHHHHHHHHHHhhhccCCCCCeE-EEEEecc
Q 009735 146 DDQLPLVE----CPTK--RKVSIDV-LRRKSVLLLVS-DLDVSNEE---LFLLEQMYRESRQLSSRTESQYE-VVWLPIV 213 (527)
Q Consensus 146 ~~~~pl~d----g~~~--~kV~Is~-L~gK~VlLyfS-al~~~~~~---~~~L~~iY~~lk~~~~~~~~~fE-IVwIpiV 213 (527)
|+..|-|. ..+| +.|++++ ++||.|+|+|= +.||++|. ++.|.+.|+++++ .+++ ||-|+.
T Consensus 7 G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~------~~v~~vv~Is~- 79 (162)
T 1tp9_A 7 GDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKS------KGVTEILCISV- 79 (162)
T ss_dssp TCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHH------TTCCCEEEEES-
T ss_pred CCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEEC-
Confidence 34455554 4577 8999999 99999999887 89998887 5679999999962 3588 999985
Q ss_pred CCCCCcchhhHHHHHHhhcCC--CceeecCCCCCCHHHHHHHHHhhCCC------C-----CcEEEEeCCCCceeccc
Q 009735 214 DRSTPWTEAKEHKFEALQYMM--PWFSVHHPSAIDPAVIRYAKEKWDFR------K-----KPILVVLDPQGRVVNQN 278 (527)
Q Consensus 214 d~s~~w~D~~~~~F~~~~~~M--PWyAVpf~~~i~~~~~r~ike~~~~~------~-----iP~LVvL~pqGkv~~~n 278 (527)
| +.+..++|-+-+ .. ||-.+- |.. +.+.+.|++. | .|..+|+| +|++....
T Consensus 80 d-----~~~~~~~~~~~~-~~~~~~~~l~-----D~~--~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~ 143 (162)
T 1tp9_A 80 N-----DPFVMKAWAKSY-PENKHVKFLA-----DGS--ATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAAN 143 (162)
T ss_dssp S-----CHHHHHHHHHTC-TTCSSEEEEE-----CTT--SHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEE
T ss_pred C-----CHHHHHHHHHhc-CCCCCeEEEE-----CCC--chHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEE
Confidence 3 233455565432 23 343222 222 3455666775 3 89999999 99998653
No 91
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.13 E-value=6e-05 Score=71.82 Aligned_cols=171 Identities=11% Similarity=0.113 Sum_probs=106.2
Q ss_pred CCc--eeeccc-ccCcEEEEEEe-cCCCChhH---HHHHHHHHHHHhhhccCCCCCe-EEEEEeccCCCCCcchhhHHHH
Q 009735 156 TKR--KVSIDV-LRRKSVLLLVS-DLDVSNEE---LFLLEQMYRESRQLSSRTESQY-EVVWLPIVDRSTPWTEAKEHKF 227 (527)
Q Consensus 156 ~~~--kV~Is~-L~gK~VlLyfS-al~~~~~~---~~~L~~iY~~lk~~~~~~~~~f-EIVwIpiVd~s~~w~D~~~~~F 227 (527)
+|+ .|+++. ++||.|+|+|= +.|||+|. ++.|.+.|+++++ .++ +||-|+. | +....++|
T Consensus 19 ~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~------~~~~~vv~is~-d-----~~~~~~~~ 86 (241)
T 1nm3_A 19 GDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKK------YGVDDILVVSV-N-----DTFVMNAW 86 (241)
T ss_dssp TTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHH------TTCCEEEEEES-S-----CHHHHHHH
T ss_pred CCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEEc-C-----CHHHHHHH
Confidence 355 899999 99999999886 99999987 6679999999963 358 9999985 3 23345566
Q ss_pred HHhhcCCC-ceeecCCCCCCHHHHHHHHHhhCCC-----------CCcEEEEeCCCCceecccHHHHHHHhCCccc--cC
Q 009735 228 EALQYMMP-WFSVHHPSAIDPAVIRYAKEKWDFR-----------KKPILVVLDPQGRVVNQNALHMMWIWGSVAF--PF 293 (527)
Q Consensus 228 ~~~~~~MP-WyAVpf~~~i~~~~~r~ike~~~~~-----------~iP~LVvL~pqGkv~~~nA~~mI~~wG~~Af--PF 293 (527)
-+-.. .+ |-.+.-+ . ..+.+.|++. ..|..+++ ++|++..... |.... ||
T Consensus 87 ~~~~~-~~~~~~l~D~-----~--~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~-------~~~~~~~~~ 150 (241)
T 1nm3_A 87 KEDEK-SENISFIPDG-----N--GEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFI-------EPNEPGDPF 150 (241)
T ss_dssp HHHTT-CTTSEEEECT-----T--SHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEE-------CCSCSSCCC
T ss_pred HHhcC-CCceEEEECC-----C--cHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEE-------eccCCCccc
Confidence 54332 22 3222222 1 2344556664 35899999 9999986532 22222 45
Q ss_pred ChhhHHHhhhhcccceeeccccCCCCccccccCceEEEEEccCChhHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhh
Q 009735 294 SVAREEALWKEETWRIDLLADSVDPVIPTWIMEQKHICLYGGEDLEWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKA 373 (527)
Q Consensus 294 T~~r~e~L~~~e~w~lelL~d~id~~I~~~i~egK~I~LYgg~d~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e~v 373 (527)
+....+++-+. ++... + ....|-+|....-..| .+++++-++.++++|.+-|..+..++.+
T Consensus 151 ~~~~~~~il~~-----------l~~~~---i-~~~~i~ly~~~~Cp~C----~~a~~~L~~~~i~~~~~~i~~~~~~~~l 211 (241)
T 1nm3_A 151 KVSDADTMLKY-----------LAPQH---Q-VQESISIFTKPGCPFC----AKAKQLLHDKGLSFEEIILGHDATIVSV 211 (241)
T ss_dssp SSSSHHHHHHH-----------HCTTS---C-CCCCEEEEECSSCHHH----HHHHHHHHHHTCCCEEEETTTTCCHHHH
T ss_pred eecCHHHHHHH-----------hhhhc---c-ccceEEEEECCCChHH----HHHHHHHHHcCCceEEEECCCchHHHHH
Confidence 44444444322 11111 1 2345788876544544 4455554556999999999887544443
No 92
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.12 E-value=4.2e-06 Score=77.44 Aligned_cols=75 Identities=16% Similarity=0.220 Sum_probs=55.3
Q ss_pred cccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceee
Q 009735 162 IDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSV 239 (527)
Q Consensus 162 Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAV 239 (527)
++.++||.|+|.|+|.||+||. .|.|.+++++. .+++++.|.+ |+..+....+..
T Consensus 49 l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~--------~~v~~~~v~~--------d~~~~~~~~~~~------- 105 (167)
T 1z6n_A 49 LQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQ--------PNIELAIISK--------GRAEDDLRQRLA------- 105 (167)
T ss_dssp HHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHC--------TTEEEEEECH--------HHHHHHTTTTTT-------
T ss_pred HHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHC--------CCcEEEEEEC--------CCCHHHHHHHHH-------
Confidence 4568899999999999999998 67899988653 2488888864 443332222111
Q ss_pred cCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 240 HHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 240 pf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
-+++++|+++++|++|+++.
T Consensus 106 -----------------~~v~~iPt~i~~~~~G~~~~ 125 (167)
T 1z6n_A 106 -----------------LERIAIPLVLVLDEEFNLLG 125 (167)
T ss_dssp -----------------CSSCCSSEEEEECTTCCEEE
T ss_pred -----------------cCCCCcCeEEEECCCCCEEE
Confidence 14789999999999999864
No 93
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.08 E-value=1.1e-05 Score=68.56 Aligned_cols=75 Identities=13% Similarity=0.147 Sum_probs=57.4
Q ss_pred cccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceee
Q 009735 162 IDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSV 239 (527)
Q Consensus 162 Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAV 239 (527)
....+||.|+++|.+.||++|. .+.|.+++++.+ .++.++.|.+ |.
T Consensus 21 ~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--------~~----------------- 68 (126)
T 2l57_A 21 EEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-------GKFNIYYARL--------EE----------------- 68 (126)
T ss_dssp TTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-------SSCEEEEEET--------TS-----------------
T ss_pred HHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-------CCeEEEEEeC--------CC-----------------
Confidence 3446799999999999999998 456888777762 4688888863 10
Q ss_pred cCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 240 HHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 240 pf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
+. -..+.+.|++++.|++++++++|+++.
T Consensus 69 ------d~--~~~~~~~~~v~~~Pt~~~~~~~G~~~~ 97 (126)
T 2l57_A 69 ------EK--NIDLAYKYDANIVPTTVFLDKEGNKFY 97 (126)
T ss_dssp ------SH--HHHHHHHTTCCSSSEEEEECTTCCEEE
T ss_pred ------Cc--hHHHHHHcCCcceeEEEEECCCCCEEE
Confidence 11 134667789999999999999999864
No 94
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.06 E-value=1.7e-05 Score=68.05 Aligned_cols=85 Identities=7% Similarity=0.127 Sum_probs=63.0
Q ss_pred CccccCCCCceeecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHH
Q 009735 149 LPLVECPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHK 226 (527)
Q Consensus 149 ~pl~dg~~~~kV~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~ 226 (527)
.|-+...++..+.....+||.|+++|.+.||++|. .+.|.+++++.+ +++.++.|.+ |+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-------~~v~~~~vd~--------d~~~-- 86 (128)
T 3ul3_B 24 VPRLQQNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYG-------KRIYLLKVDL--------DKNE-- 86 (128)
T ss_dssp --CCCCCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHG-------GGEEEEEEEG--------GGCH--
T ss_pred CCccccCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCeEEEEEEC--------CCCH--
Confidence 34445555656666778899999999999999998 456888888874 2477777754 3221
Q ss_pred HHHhhcCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 227 FEALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 227 F~~~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+.+.|++++.|+++++ ++|+++.
T Consensus 87 -------------------------~l~~~~~v~~~Pt~~~~-~~G~~~~ 110 (128)
T 3ul3_B 87 -------------------------SLARKFSVKSLPTIILL-KNKTMLA 110 (128)
T ss_dssp -------------------------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------------------------HHHHHcCCCCcCEEEEE-ECCEEEE
Confidence 45677899999999999 7898765
No 95
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.03 E-value=2.2e-05 Score=71.78 Aligned_cols=103 Identities=12% Similarity=0.060 Sum_probs=71.9
Q ss_pred CCCCceeecccc-cCcEEEEEE-ecCCCChhH---HHHHHHHHHHHhhhccCCCCCe-EEEEEeccCCCCCcchhhHHHH
Q 009735 154 CPTKRKVSIDVL-RRKSVLLLV-SDLDVSNEE---LFLLEQMYRESRQLSSRTESQY-EVVWLPIVDRSTPWTEAKEHKF 227 (527)
Q Consensus 154 g~~~~kV~Is~L-~gK~VlLyf-Sal~~~~~~---~~~L~~iY~~lk~~~~~~~~~f-EIVwIpiVd~s~~w~D~~~~~F 227 (527)
..+|+.|+++++ +||.|+|+| -+.|||+|. ++.|.+.|+++++ .++ +||-|+. | +.+..++|
T Consensus 17 ~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~------~gv~~vv~Is~-d-----~~~~~~~~ 84 (167)
T 2wfc_A 17 ATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHG------KGVDIIACMAV-N-----DSFVMDAW 84 (167)
T ss_dssp SSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHH------TTCCEEEEEES-S-----CHHHHHHH
T ss_pred CCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEeC-C-----CHHHHHHH
Confidence 456889999998 999888876 599998875 4679999999963 358 9999985 3 23345566
Q ss_pred HHhhcCCC--ceeecCCCCCCHHHHHHHHHhhCCCC-----------CcEEEEeCCCCceecc
Q 009735 228 EALQYMMP--WFSVHHPSAIDPAVIRYAKEKWDFRK-----------KPILVVLDPQGRVVNQ 277 (527)
Q Consensus 228 ~~~~~~MP--WyAVpf~~~i~~~~~r~ike~~~~~~-----------iP~LVvL~pqGkv~~~ 277 (527)
-+-. .+| |..+.-++ ..+.+.|++.. .|..+|+ ++|+++..
T Consensus 85 ~~~~-~~~~~fp~l~D~~-------~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~ 138 (167)
T 2wfc_A 85 GKAH-GADDKVQMLADPG-------GAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKV 138 (167)
T ss_dssp HHHT-TCTTTSEEEECTT-------SHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEE
T ss_pred HHhc-CCCcceEEEECCC-------CcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEE
Confidence 5432 344 43332222 23445667653 4999999 99999875
No 96
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.02 E-value=2.3e-06 Score=76.56 Aligned_cols=93 Identities=12% Similarity=0.067 Sum_probs=62.9
Q ss_pred CCCCceeecccccCcEEEEEEe-cCCCChhH--HHHH---HHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHH
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLL---EQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKF 227 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L---~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F 227 (527)
...+..+..+..+||.|+|+|. +.||++|. .+.| .++.+... .++.+|-|.+ |++.
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-------~~~~~v~vd~--------~~~~--- 95 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-------VHLHMVEVDF--------PQKN--- 95 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-------HHCEEEEEEC--------CSSC---
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-------CcEEEEEecC--------cccc---
Confidence 3345566777789999999999 99999998 4456 44433331 2466666543 1111
Q ss_pred HHhhcCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 228 EALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 228 ~~~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
.+| ++. ......+.+.|++.++|+++++|++|+++..
T Consensus 96 -----~~~-----~~~---~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~ 132 (154)
T 2ju5_A 96 -----HQP-----EEQ---RQKNQELKAQYKVTGFPELVFIDAEGKQLAR 132 (154)
T ss_dssp -----CCC-----HHH---HHHHHHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred -----CCC-----hhh---HhhHHHHHHHcCCCCCCEEEEEcCCCCEEEE
Confidence 223 211 1234567789999999999999999999864
No 97
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.97 E-value=1.5e-05 Score=77.37 Aligned_cols=103 Identities=12% Similarity=0.076 Sum_probs=71.5
Q ss_pred CCCceeecccccCc-EEEEEE-ecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 155 PTKRKVSIDVLRRK-SVLLLV-SDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 155 ~~~~kV~Is~L~gK-~VlLyf-Sal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
.+| .|++++++|| .|+|+| .+.|||.|. ++.|.+.|++++. .+++||.||+ | +.....+|-+-
T Consensus 17 ~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~------~~v~vigIS~-D-----~~~~~~~~~~~ 83 (233)
T 2v2g_A 17 TIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKK------RGVKLIALSC-D-----NVADHKEWSED 83 (233)
T ss_dssp TTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHH------TTEEEEEEES-S-----CHHHHHHHHHH
T ss_pred CCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHH------cCCEEEEEcC-C-----CHHHHHHHHHH
Confidence 456 7999999998 777777 589998887 5579999999962 3599999995 4 12334455442
Q ss_pred -----hc--CCCceeecCCCCCCHHHHHHHHHhhCCC------------CCcEEEEeCCCCceecc
Q 009735 231 -----QY--MMPWFSVHHPSAIDPAVIRYAKEKWDFR------------KKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 231 -----~~--~MPWyAVpf~~~i~~~~~r~ike~~~~~------------~iP~LVvL~pqGkv~~~ 277 (527)
.. .++|..+--++ +.+.+.|++. ..|..+|+||+|++...
T Consensus 84 i~~~~~~~~~~~fpil~D~~-------~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~ 142 (233)
T 2v2g_A 84 VKCLSGVKGDMPYPIIADET-------RELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLS 142 (233)
T ss_dssp HHHHHTCCSSCSSCEEECTT-------CHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEE
T ss_pred HHHhhCcccCCceEEEECCh-------HHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEE
Confidence 12 55554433221 2345566764 47999999999999764
No 98
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.96 E-value=3e-06 Score=77.11 Aligned_cols=104 Identities=13% Similarity=0.159 Sum_probs=73.3
Q ss_pred CCCCceeecccc--cCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHH
Q 009735 154 CPTKRKVSIDVL--RRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFE 228 (527)
Q Consensus 154 g~~~~kV~Is~L--~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~ 228 (527)
..+|+.|+++++ +||.|+|+|= +.|||+|. ++.|.+.|++++ +.++++|-|+. | +.+..++|.
T Consensus 18 ~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~------~~~v~vv~is~-d-----~~~~~~~~~ 85 (164)
T 4gqc_A 18 NQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLE------KANAEVLAISV-D-----SPWCLKKFK 85 (164)
T ss_dssp BTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGG------GSSSEEEEEES-S-----CHHHHHHHH
T ss_pred CCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhh------ccCceEEEecC-C-----CHHHHHHHH
Confidence 467889999998 8998888876 89999987 556888898885 24589999985 3 244556675
Q ss_pred HhhcCCCceeecCCCCCCHHHHHHHHHhhCCC----------CCcEEEEeCCCCceecc
Q 009735 229 ALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFR----------KKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 229 ~~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~----------~iP~LVvL~pqGkv~~~ 277 (527)
+- ..+||-.+--++ +.+.+.|++. ..|...|+|++|++...
T Consensus 86 ~~-~~~~fp~l~D~~-------~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~ 136 (164)
T 4gqc_A 86 DE-NRLAFNLLSDYN-------REVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYK 136 (164)
T ss_dssp HH-TTCCSEEEECTT-------SHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEE
T ss_pred Hh-cCcccceeecCc-------hHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEE
Confidence 43 345554433222 2345566663 36889999999999754
No 99
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.96 E-value=2.8e-05 Score=74.68 Aligned_cols=103 Identities=10% Similarity=0.078 Sum_probs=71.0
Q ss_pred CCCceeecccccCc--EEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHh
Q 009735 155 PTKRKVSIDVLRRK--SVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 155 ~~~~kV~Is~L~gK--~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
.+| .|++++++|| .|+++|-+.||+.|. ++.|.++|++++ +.+++||.||+ |. .+....|-+-
T Consensus 19 ~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~------~~~v~vi~IS~-D~-----~~~~~~~~~~ 85 (224)
T 1prx_A 19 TVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFA------KRNVKLIALSI-DS-----VEDHLAWSKD 85 (224)
T ss_dssp TTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHH------TTTEEEEEEES-SC-----HHHHHHHHHH
T ss_pred CCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHH------HCCCEEEEEcC-CC-----HHHHHHHHHH
Confidence 456 8999999998 555667899999887 567999999996 24699999995 41 2334445432
Q ss_pred ----h-----cCCCceeecCCCCCCHHHHHHHHHhhCCC------------CCcEEEEeCCCCceecc
Q 009735 231 ----Q-----YMMPWFSVHHPSAIDPAVIRYAKEKWDFR------------KKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 231 ----~-----~~MPWyAVpf~~~i~~~~~r~ike~~~~~------------~iP~LVvL~pqGkv~~~ 277 (527)
. ..++|..+--++ +.+.+.|++. ..|..+|+||+|++...
T Consensus 86 i~~~~~~~~~~~~~fpil~D~~-------~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~ 146 (224)
T 1prx_A 86 INAYNSEEPTEKLPFPIIDDRN-------RELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLS 146 (224)
T ss_dssp HHHHTTSCCCSCCSSCEEECTT-------CHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEE
T ss_pred HHHhhCcccccCcCcceeecCc-------hHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEE
Confidence 1 355654443221 2344566663 37999999999999764
No 100
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.95 E-value=9.2e-06 Score=80.07 Aligned_cols=100 Identities=11% Similarity=0.162 Sum_probs=71.1
Q ss_pred eeec-ccc--cCcEE-EEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh-
Q 009735 159 KVSI-DVL--RRKSV-LLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ- 231 (527)
Q Consensus 159 kV~I-s~L--~gK~V-lLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~- 231 (527)
.|++ +++ +||.| +++|-+.||++|. ++.|.+.|++.+. .+++||-||+ | +......|.+..
T Consensus 22 ~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~------~gv~VI~VS~-D-----s~~~~~~w~~~~~ 89 (249)
T 3a2v_A 22 VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQR------LGVDLIGLSV-D-----SVFSHIKWKEWIE 89 (249)
T ss_dssp EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHH------TTEEEEEEES-S-----CHHHHHHHHHHHH
T ss_pred CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHh------CCcEEEEEEC-C-----CHHHHHHHHHHHH
Confidence 6899 998 99965 5578999999887 5579999999962 3699999996 4 233344454321
Q ss_pred ----cCCCceeecCCCCCCHHHHHHHHHhhCCC-------CCcEEEEeCCCCceecc
Q 009735 232 ----YMMPWFSVHHPSAIDPAVIRYAKEKWDFR-------KKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 232 ----~~MPWyAVpf~~~i~~~~~r~ike~~~~~-------~iP~LVvL~pqGkv~~~ 277 (527)
..++|..+--++ +.+.+.|++. ..|.++|+||+|++...
T Consensus 90 ~~~~~~i~fPil~D~~-------~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~ 139 (249)
T 3a2v_A 90 RHIGVRIPFPIIADPQ-------GTVARRLGLLHAESATHTVRGVFIVDARGVIRTM 139 (249)
T ss_dssp HHTCCCCCSCEEECTT-------SHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEE
T ss_pred HhcCCCCceeEEECCc-------hHHHHHhCCccccCCCcccceEEEECCCCeEEEE
Confidence 245544332221 3456677886 89999999999998764
No 101
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.94 E-value=1.9e-05 Score=75.65 Aligned_cols=103 Identities=11% Similarity=0.029 Sum_probs=70.5
Q ss_pred CCceeecccccCc-EE-EEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHH--
Q 009735 156 TKRKVSIDVLRRK-SV-LLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA-- 229 (527)
Q Consensus 156 ~~~kV~Is~L~gK-~V-lLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~-- 229 (527)
+| .|++++++|| .| +++|-+.||+.|. ++.|.+.|++++ +.+++||.||+ | +....++|.+
T Consensus 20 ~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~------~~~v~vi~vS~-D-----~~~~~~~~~~~i 86 (220)
T 1xcc_A 20 DG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFL------KLNCKLIGFSC-N-----SKESHDKWIEDI 86 (220)
T ss_dssp SS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHH------TTTEEEEEEES-S-----CHHHHHHHHHHH
T ss_pred CC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHH------HcCCEEEEEeC-C-----CHHHHHHHHHHH
Confidence 56 8999999998 44 4455899998886 567999999996 24699999995 4 1334455543
Q ss_pred --h--hcCCCceeecCCCCCCHHHHHHHHHhhCCC------------CCcEEEEeCCCCceeccc
Q 009735 230 --L--QYMMPWFSVHHPSAIDPAVIRYAKEKWDFR------------KKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 230 --~--~~~MPWyAVpf~~~i~~~~~r~ike~~~~~------------~iP~LVvL~pqGkv~~~n 278 (527)
+ ...++|..+--++ +.+.+.|++. ..|..+|+||+|++....
T Consensus 87 ~~~~~~~~~~fpil~D~~-------~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~ 144 (220)
T 1xcc_A 87 KYYGKLNKWEIPIVCDES-------RELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATV 144 (220)
T ss_dssp HHHHTCSCCCCCEEECTT-------SHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEE
T ss_pred HHHhcCCCCcceeEECch-------hHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEE
Confidence 1 2455554433221 2345566763 379999999999998653
No 102
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=97.93 E-value=4e-06 Score=75.34 Aligned_cols=97 Identities=13% Similarity=0.140 Sum_probs=58.9
Q ss_pred ccccCcEEEEEEecCCCChhHHH---HH--HHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHH--HHHHhhcCCC
Q 009735 163 DVLRRKSVLLLVSDLDVSNEELF---LL--EQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEH--KFEALQYMMP 235 (527)
Q Consensus 163 s~L~gK~VlLyfSal~~~~~~~~---~L--~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~--~F~~~~~~MP 235 (527)
...+||.|+|.|.|.||++|... .| .++.+.++ ++|.+|-|.+ |+..+ ....+.....
T Consensus 43 a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~-------~~~~~v~v~~--------d~~~~~~~~~~~~~~~~ 107 (172)
T 3f9u_A 43 ARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIIN-------NDYVLITLYV--------DNKTPLTEPVKIMENGT 107 (172)
T ss_dssp HHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHH-------HHCEEEEEET--------TCCCEEEEEEEEEETTE
T ss_pred HHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-------CCEEEEEEec--------Ccccccchhhhhhhcch
Confidence 34669999999999999999842 11 44444443 1488888875 21110 0001122333
Q ss_pred ceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 236 WFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 236 WyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
+..++... ........+.|++.++|+++++|++|+++..
T Consensus 108 ~~~~~~~~---~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~ 146 (172)
T 3f9u_A 108 ERTLRTVG---DKWSYLQRVKFGANAQPFYVLIDNEGNPLNK 146 (172)
T ss_dssp EEEEEEHH---HHHHHHHHHHHSCCCSSEEEEECTTSCBSSC
T ss_pred hhhhhhhh---hhhhHHHHHHcCCCCcceEEEECCCCCEEee
Confidence 33333211 1222333588999999999999999999864
No 103
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.90 E-value=2.7e-05 Score=67.56 Aligned_cols=78 Identities=14% Similarity=0.066 Sum_probs=57.4
Q ss_pred eeecccccCcEEEEEEecCCCChhHHH--HH---HHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcC
Q 009735 159 KVSIDVLRRKSVLLLVSDLDVSNEELF--LL---EQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYM 233 (527)
Q Consensus 159 kV~Is~L~gK~VlLyfSal~~~~~~~~--~L---~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~ 233 (527)
+..++.++||.|+|+|.+.||++|... .| .+++++.+ ++.++.|.+ |..
T Consensus 23 ~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--------~~~~~~vd~--------~~~---------- 76 (134)
T 2fwh_A 23 NQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--------DTVLLQANV--------TAN---------- 76 (134)
T ss_dssp HHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--------TSEEEEEEC--------TTC----------
T ss_pred HHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--------CcEEEEEeC--------CCC----------
Confidence 455667789999999999999999842 34 55555542 377777764 111
Q ss_pred CCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 234 MPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 234 MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
. .....+.+.|++.+.|+++++|++|+++
T Consensus 77 ---------~----~~~~~l~~~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 77 ---------D----AQDVALLKHLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp ---------C----HHHHHHHHHTTCCSSSEEEEECTTSCBC
T ss_pred ---------c----chHHHHHHHcCCCCCCEEEEECCCCCEe
Confidence 0 1234567889999999999999999997
No 104
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.88 E-value=1.3e-05 Score=68.68 Aligned_cols=74 Identities=16% Similarity=0.123 Sum_probs=56.6
Q ss_pred ccCcEEEEEEecCCCChhH--HHHHH--HHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeec
Q 009735 165 LRRKSVLLLVSDLDVSNEE--LFLLE--QMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVH 240 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~--~~~L~--~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVp 240 (527)
.+||.|+|+|.+.||++|. .+.|. ++.++++ +++.++.|.+ +.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~-------~~~~~~~vd~--------~~------------------ 73 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIA-------KHFEVVKIDV--------GN------------------ 73 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHH-------HHCEEEEEEC--------TT------------------
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhc-------CCEEEEEEeC--------Cc------------------
Confidence 4699999999999999998 44677 7777764 2488888865 11
Q ss_pred CCCCCCHHHHHHHHHhhCC---CCCcEEEEeCCCCceecc
Q 009735 241 HPSAIDPAVIRYAKEKWDF---RKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 241 f~~~i~~~~~r~ike~~~~---~~iP~LVvL~pqGkv~~~ 277 (527)
. + . ...+.+.|++ ++.|+++++|++|+++..
T Consensus 74 ~-~---~--~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~ 107 (133)
T 3fk8_A 74 F-D---R--NLELSQAYGDPIQDGIPAVVVVNSDGKVRYT 107 (133)
T ss_dssp T-T---S--SHHHHHHTTCGGGGCSSEEEEECTTSCEEEE
T ss_pred c-c---c--hHHHHHHhCCccCCccceEEEECCCCCEEEE
Confidence 1 1 0 1346688899 999999999999998854
No 105
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.76 E-value=7.8e-05 Score=64.63 Aligned_cols=68 Identities=12% Similarity=0.125 Sum_probs=51.9
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+++|.+.||++|. .+.|.+++++.+ +++.++-|.+ |++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--------~~~-------------------- 81 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYD-------GQIVIYKVDT--------EKE-------------------- 81 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhc-------CCEEEEEEeC--------CCC--------------------
Confidence 478999999999999998 456887777763 2466666643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
..+.+.|++++.|+++++|++|+++
T Consensus 82 -------~~l~~~~~v~~~Pt~~~~~~~G~~~ 106 (136)
T 2l5l_A 82 -------QELAGAFGIRSIPSILFIPMEGKPE 106 (136)
T ss_dssp -------HHHHHHTTCCSSCEEEEECSSSCCE
T ss_pred -------HHHHHHcCCCCCCEEEEECCCCcEE
Confidence 1355678999999999999999986
No 106
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.67 E-value=9.3e-05 Score=61.74 Aligned_cols=68 Identities=21% Similarity=0.244 Sum_probs=53.1
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+|+|.+.||++|. .+.|.+++++.+ +++.++.|.+ |++ +
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-------~~v~~~~vd~--------~~~------------------~- 61 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMG-------DKLKIVKIDV--------DEN------------------Q- 61 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHT-------TTCEEEEEET--------TTC------------------C-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC-------CCcEEEEEEC--------CCC------------------H-
Confidence 789999999999999998 456888888773 2578887764 221 1
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+.+.|++++.|+++++ ++|+++.
T Consensus 62 --------~l~~~~~v~~~Pt~~~~-~~G~~~~ 85 (112)
T 2voc_A 62 --------ETAGKYGVMSIPTLLVL-KDGEVVE 85 (112)
T ss_dssp --------SHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred --------HHHHHcCCCcccEEEEE-eCCEEEE
Confidence 14567899999999999 9999874
No 107
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=97.62 E-value=0.00031 Score=64.98 Aligned_cols=104 Identities=14% Similarity=0.077 Sum_probs=69.5
Q ss_pred CCCCceeeccc-ccCcEEEEEE-ecCCCChhH---HHHHHHHHHHHhhhccCCCCCeEEEE-EeccCCCCCcchhhHHHH
Q 009735 154 CPTKRKVSIDV-LRRKSVLLLV-SDLDVSNEE---LFLLEQMYRESRQLSSRTESQYEVVW-LPIVDRSTPWTEAKEHKF 227 (527)
Q Consensus 154 g~~~~kV~Is~-L~gK~VlLyf-Sal~~~~~~---~~~L~~iY~~lk~~~~~~~~~fEIVw-IpiVd~s~~w~D~~~~~F 227 (527)
..+|+.|++++ ++||.|+|+| =+.|||+|. ++.|.+.|+++++ .+++||- ||. | +....++|
T Consensus 29 ~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~------~gv~vv~~iS~-D-----~~~~~~~f 96 (173)
T 3mng_A 29 GEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKA------KGVQVVACLSV-N-----DAFVTGEW 96 (173)
T ss_dssp SSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHT------TTCCEEEEEES-S-----CHHHHHHH
T ss_pred CCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHh------CCCEEEEEEcC-C-----CHHHHHHH
Confidence 45788999999 5999776554 599999987 3679999999962 3599997 885 3 23345566
Q ss_pred HHhhcCCC--ceeecCCCCCCHHHHHHHHHhhCCC-------------CCcEEEEeCCCCceeccc
Q 009735 228 EALQYMMP--WFSVHHPSAIDPAVIRYAKEKWDFR-------------KKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 228 ~~~~~~MP--WyAVpf~~~i~~~~~r~ike~~~~~-------------~iP~LVvL~pqGkv~~~n 278 (527)
-+-.. .| +..+--++ ..+.+.|++. ..|...|+| +|++....
T Consensus 97 ~~~~~-~~~~fp~l~D~~-------~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~ 153 (173)
T 3mng_A 97 GRAHK-AEGKVRLLADPT-------GAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALN 153 (173)
T ss_dssp HHHTT-CTTTCEEEECTT-------CHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred HHHhC-CCCceEEEECCC-------hHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEE
Confidence 54322 22 32222221 2344455654 359999999 99997653
No 108
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.61 E-value=0.00016 Score=58.72 Aligned_cols=68 Identities=16% Similarity=0.176 Sum_probs=50.8
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+++|.+.||++|. .+.|.++.++.+ +++.++.|.+ |++
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--------~~~-------------------- 60 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHA-------DKVTVAKLNV--------DEN-------------------- 60 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHST-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCcEEEEEEC--------cCC--------------------
Confidence 478999999999999998 445777766652 2477777754 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 61 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 85 (105)
T 1nsw_A 61 -------PETTSQFGIMSIPTLILF-KGGRPVK 85 (105)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCccccEEEEE-eCCeEEE
Confidence 125567899999999999 8998764
No 109
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.58 E-value=0.00021 Score=57.76 Aligned_cols=68 Identities=15% Similarity=0.240 Sum_probs=51.9
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.++++|.+.||++|. .+.|.+++++.+ +++.++.|.+ |++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 62 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYE-------GKADILKLDV--------DEN-------------------- 62 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCcEEEEEEC--------CcC--------------------
Confidence 899999999999999998 456888887763 2377777754 222
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|++++++ +|+.+.
T Consensus 63 -------~~~~~~~~v~~~Pt~~~~~-~G~~~~ 87 (106)
T 3die_A 63 -------PSTAAKYEVMSIPTLIVFK-DGQPVD 87 (106)
T ss_dssp -------HHHHHHTTCCSBSEEEEEE-TTEEEE
T ss_pred -------HHHHHhCCCcccCEEEEEe-CCeEEE
Confidence 1245678999999999995 898764
No 110
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.58 E-value=7.5e-05 Score=63.34 Aligned_cols=78 Identities=10% Similarity=0.075 Sum_probs=52.0
Q ss_pred eeecccccCcEEEEEEecCCCChhHH--HHH---HHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcC
Q 009735 159 KVSIDVLRRKSVLLLVSDLDVSNEEL--FLL---EQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYM 233 (527)
Q Consensus 159 kV~Is~L~gK~VlLyfSal~~~~~~~--~~L---~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~ 233 (527)
.+..+..+||.|+|+|.+.||++|.. +.| ..+-+.++ .++.++-|.+ |.
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~-------~~~~~~~vd~--------~~----------- 72 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFN-------RHFVNLKMDM--------EK----------- 72 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHH-------HHSEEEEECS--------SS-----------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHh-------cCeEEEEEec--------CC-----------
Confidence 44455578999999999999999984 334 33333332 1244443321 11
Q ss_pred CCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 234 MPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 234 MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
+ ....+.+.|++.+.|+++++|++|+++.
T Consensus 73 ---------~-----~~~~~~~~~~v~~~Pt~~~~d~~G~~~~ 101 (130)
T 2kuc_A 73 ---------G-----EGVELRKKYGVHAYPTLLFINSSGEVVY 101 (130)
T ss_dssp ---------T-----THHHHHHHTTCCSSCEEEEECTTSCEEE
T ss_pred ---------c-----chHHHHHHcCCCCCCEEEEECCCCcEEE
Confidence 1 1234667889999999999999999875
No 111
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.55 E-value=0.00019 Score=58.60 Aligned_cols=68 Identities=19% Similarity=0.256 Sum_probs=50.4
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+++|.+.||++|. .+.|.++.++.+ +++.++-|.+ |++ +
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~------------------~- 64 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQ-------GKLTVAKLNI--------DQN------------------P- 64 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--------TTC------------------T-
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhC-------CCcEEEEEEC--------CCC------------------H-
Confidence 479999999999999998 446777777653 2466666654 211 0
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+.+.|++++.|+++++ ++|+++.
T Consensus 65 --------~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (108)
T 2trx_A 65 --------GTAPKYGIRGIPTLLLF-KNGEVAA 88 (108)
T ss_dssp --------THHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHcCCcccCEEEEE-eCCEEEE
Confidence 14567899999999999 8999864
No 112
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.55 E-value=0.00019 Score=67.02 Aligned_cols=129 Identities=10% Similarity=0.023 Sum_probs=80.3
Q ss_pred CCCCCccccCC----CC-ceeeccc-ccCcEEE-EEEecCCCChhH---HHHHHHHHHHHhhhccCCCCCeE-EEEEecc
Q 009735 145 KDDQLPLVECP----TK-RKVSIDV-LRRKSVL-LLVSDLDVSNEE---LFLLEQMYRESRQLSSRTESQYE-VVWLPIV 213 (527)
Q Consensus 145 k~~~~pl~dg~----~~-~kV~Is~-L~gK~Vl-LyfSal~~~~~~---~~~L~~iY~~lk~~~~~~~~~fE-IVwIpiV 213 (527)
-|+..|-|.-. +| +.|++++ ++||.|. ++|=+.|||+|. ++.|.+.|+++++ .+++ ||-|+.
T Consensus 28 vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~------~gv~~vv~Is~- 100 (184)
T 3uma_A 28 VGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILA------RGVDDIAVVAV- 100 (184)
T ss_dssp TTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHT------TTCCEEEEEES-
T ss_pred CCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHH------cCCCEEEEEEC-
Confidence 34445555433 56 8999999 8999665 556699999985 4679999999962 3488 999986
Q ss_pred CCCCCcchhhHHHHHHhhcCCC--ceeecCCCCCCHHHHHHHHHhhCCC-----------CCcEEEEeCCCCceecccHH
Q 009735 214 DRSTPWTEAKEHKFEALQYMMP--WFSVHHPSAIDPAVIRYAKEKWDFR-----------KKPILVVLDPQGRVVNQNAL 280 (527)
Q Consensus 214 d~s~~w~D~~~~~F~~~~~~MP--WyAVpf~~~i~~~~~r~ike~~~~~-----------~iP~LVvL~pqGkv~~~nA~ 280 (527)
| +....++|-+-. ..| |--+.-+ . ..+.+.|++. ..|..+|++ +|+|.....
T Consensus 101 d-----~~~~~~~f~~~~-~~~~~fp~l~D~-----~--~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~- 165 (184)
T 3uma_A 101 N-----DLHVMGAWATHS-GGMGKIHFLSDW-----N--AAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNI- 165 (184)
T ss_dssp S-----CHHHHHHHHHHH-TCTTTSEEEECT-----T--CHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEE-
T ss_pred C-----CHHHHHHHHHHh-CCCCceEEEEcC-----c--hHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEE-
Confidence 3 233455665432 233 3333222 2 3445566764 357788886 999976542
Q ss_pred HHHHHhCCccccCChhhHHHh
Q 009735 281 HMMWIWGSVAFPFSVAREEAL 301 (527)
Q Consensus 281 ~mI~~wG~~AfPFT~~r~e~L 301 (527)
|.+.=+++.+..+++
T Consensus 166 ------~~~~g~~~~~~~~~v 180 (184)
T 3uma_A 166 ------EESPGQATASGAAAM 180 (184)
T ss_dssp ------CSSTTCCSTTSHHHH
T ss_pred ------eCCCCCCcCCCHHHH
Confidence 333335555555444
No 113
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.55 E-value=0.00028 Score=57.89 Aligned_cols=68 Identities=15% Similarity=0.165 Sum_probs=51.7
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.++++|.+.||++|. .+.|.++.++.+ +++.++.|.+ |.+.
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--------~~~~------------------- 69 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYS-------DRLKVVKLEI--------DPNP------------------- 69 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT-------TTCEEEEEES--------TTCH-------------------
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhC-------CcEEEEEEEc--------CCCH-------------------
Confidence 588999999999999998 345777766652 3488888864 2211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+.+.|++.+.|+++++ ++|+++.
T Consensus 70 --------~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (115)
T 1thx_A 70 --------TTVKKYKVEGVPALRLV-KGEQILD 93 (115)
T ss_dssp --------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHcCCCceeEEEEE-cCCEEEE
Confidence 25567899999999999 8999875
No 114
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.51 E-value=0.00027 Score=58.21 Aligned_cols=68 Identities=24% Similarity=0.180 Sum_probs=50.9
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.||.|+++|.+.||++|. .+.|.+++++.+ +++.++.|.+ |++
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 66 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYG-------DKIEIVKLNI--------DEN-------------------- 66 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhc-------CCeEEEEEEc--------CCC--------------------
Confidence 478999999999999998 456777777663 3477777754 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 67 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 91 (112)
T 1t00_A 67 -------PGTAAKYGVMSIPTLNVY-QGGEVAK 91 (112)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhCCCCcccEEEEE-eCCEEEE
Confidence 134567899999999888 7998863
No 115
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.51 E-value=0.00032 Score=56.69 Aligned_cols=68 Identities=15% Similarity=0.181 Sum_probs=50.9
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.++++|.+.||++|. .+.|.++.+++. +++.++.|.+ |.+
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 61 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYE-------GKLLVAKLDV--------DEN-------------------- 61 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTB-------TTBEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhh-------CceEEEEEEC--------CCC--------------------
Confidence 478999999999999998 445777777663 2466666654 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++.+.|+++++ ++|+++.
T Consensus 62 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 86 (109)
T 2yzu_A 62 -------PKTAMRYRVMSIPTVILF-KDGQPVE 86 (109)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HhHHHhCCCCcCCEEEEE-eCCcEee
Confidence 125667899999999999 8999874
No 116
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.50 E-value=0.00021 Score=69.56 Aligned_cols=117 Identities=16% Similarity=0.135 Sum_probs=80.3
Q ss_pred CCCCcccc------CCCCceeecccccCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCC
Q 009735 146 DDQLPLVE------CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRS 216 (527)
Q Consensus 146 ~~~~pl~d------g~~~~kV~Is~L~gK~VlLyfS-al~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s 216 (527)
|+.-|-|. ..++.+|++++++||.|.|||= +.++|.|- +..+.+.|++.+ +.+.+||-||. |
T Consensus 29 G~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~------~~g~~vigiS~-D-- 99 (219)
T 3tue_A 29 NSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFN------ELNCEVLACSI-D-- 99 (219)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHH------TTTEEEEEEES-S--
T ss_pred CCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhc------cCCcEEEEeeC-C--
Confidence 33456664 4567899999999999999997 45555544 556999999996 34699999996 3
Q ss_pred CCcchhhHHHHHH-hhcCCCceeecCCCCCCHHHHHHHHHhhCC----CCC--cEEEEeCCCCceec
Q 009735 217 TPWTEAKEHKFEA-LQYMMPWFSVHHPSAIDPAVIRYAKEKWDF----RKK--PILVVLDPQGRVVN 276 (527)
Q Consensus 217 ~~w~D~~~~~F~~-~~~~MPWyAVpf~~~i~~~~~r~ike~~~~----~~i--P~LVvL~pqGkv~~ 276 (527)
+-....+|.+ ...+..-+.+|||-+-|.. +.+.+.|++ .+. -...|+||+|++..
T Consensus 100 ---s~~sh~~w~~~~~~~~~~~~l~fpllsD~~--~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~ 161 (219)
T 3tue_A 100 ---SEYAHLQWTLQDRKKGGLGTMAIPILADKT--KNIARSYGVLEESQGVAYRGLFIIDPHGMLRQ 161 (219)
T ss_dssp ---CHHHHHHHHHSCGGGTCCCSCSSCEEECTT--SHHHHHTTCEETTTTEECEEEEEECTTSBEEE
T ss_pred ---chhhHHHHhhhhHHhcCccccccccccCcc--cHHHHHcCCcccCCCeeEEEEEEECCCCeEEE
Confidence 2445667753 4455555666775433333 446666666 233 37899999998853
No 117
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.50 E-value=0.00031 Score=56.78 Aligned_cols=69 Identities=14% Similarity=0.080 Sum_probs=50.4
Q ss_pred ccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 165 LRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
.++|.++++|.+.||++|. .+.|.++.++.+ .++.++.|.+ |++
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~------------------- 63 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFA-------DNVVVLKVDV--------DEC------------------- 63 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--------TTC-------------------
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC-------CCeEEEEEec--------cch-------------------
Confidence 4789999999999999998 345777666652 3577777654 211
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 64 --------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (106)
T 1xwb_A 64 --------EDIAMEYNISSMPTFVFL-KNGVKVE 88 (106)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHHcCCCcccEEEEE-cCCcEEE
Confidence 235567899999998777 6898764
No 118
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.49 E-value=0.00024 Score=69.00 Aligned_cols=116 Identities=15% Similarity=0.134 Sum_probs=77.2
Q ss_pred CCCcccc-----CCCCceeecccccCcEEEEEEe-cCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCC
Q 009735 147 DQLPLVE-----CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTP 218 (527)
Q Consensus 147 ~~~pl~d-----g~~~~kV~Is~L~gK~VlLyfS-al~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~ 218 (527)
+.-|-|. +.++..|++++++||.|.|||= +.|+|.|-+ ..+.+.|++.+. .+.+||-||. |
T Consensus 27 ~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~------~g~~vigiS~-D---- 95 (216)
T 3sbc_A 27 KQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEE------QGAQVLFAST-D---- 95 (216)
T ss_dssp SBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHH------TTEEEEEEES-S----
T ss_pred CcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhcc------CCceEEEeec-C----
Confidence 3345554 4466799999999999999987 667777764 469999999963 4599999996 3
Q ss_pred cchhhHHHHHHh-hcCCCceeecCCCCCCHHHHHHHHHhhCCC------CCcEEEEeCCCCceec
Q 009735 219 WTEAKEHKFEAL-QYMMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVN 276 (527)
Q Consensus 219 w~D~~~~~F~~~-~~~MPWyAVpf~~~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~ 276 (527)
+.....+|.+- .....-..++||-+.|.. +.+.+.|++- ..+...|+||+|++..
T Consensus 96 -s~~sh~aw~~~~~~~~~~~~l~fpllsD~~--~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~ 157 (216)
T 3sbc_A 96 -SEYSLLAWTNIPRKEGGLGPINIPLLADTN--HSLSRDYGVLIEEEGVALRGLFIIDPKGVIRH 157 (216)
T ss_dssp -CHHHHHHHHTSCGGGTCCCSCSSCEEECTT--SHHHHHHTCEETTTTEECEEEEEECTTSBEEE
T ss_pred -chhhHHHHHHHHHHhCCccCcccceEeCCC--CHHHHHcCCeeccCCceeeEEEEECCCCeEEE
Confidence 24456667542 222222234554322222 4455566662 2478999999998854
No 119
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.49 E-value=0.00037 Score=56.70 Aligned_cols=68 Identities=13% Similarity=0.173 Sum_probs=50.3
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.++++|.+.||++|. .+.|.+++++.+ +++.++.|.+ |++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 62 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYK-------DKLKCVKLNT--------DES-------------------- 62 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhC-------CceEEEEEEC--------CCC--------------------
Confidence 478999999999999998 456877777763 2477777653 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 63 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 87 (107)
T 1dby_A 63 -------PNVASEYGIRSIPTIMVF-KGGKKCE 87 (107)
T ss_dssp -------HHHHHHHTCCSSCEEEEE-SSSSEEE
T ss_pred -------HHHHHHCCCCcCCEEEEE-eCCEEEE
Confidence 134567899999999888 7998864
No 120
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.49 E-value=0.00032 Score=56.81 Aligned_cols=68 Identities=16% Similarity=0.159 Sum_probs=51.3
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+|+|.+.||++|. .+.|.++.++.. +++.++.|.+ |++
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 63 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFA-------GKVTVAKVNI--------DDN-------------------- 63 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TSEEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhC-------CcEEEEEEEC--------CCC--------------------
Confidence 578999999999999998 445777777763 2577777754 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 64 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (107)
T 2i4a_A 64 -------PETPNAYQVRSIPTLMLV-RDGKVID 88 (107)
T ss_dssp -------CHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhcCCCccCEEEEE-eCCEEEE
Confidence 124567899999999999 8999864
No 121
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.49 E-value=0.00022 Score=59.80 Aligned_cols=72 Identities=8% Similarity=0.183 Sum_probs=52.2
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.||.|+++|.+.||++|. .+.|.+++++.+ ..|+++.+ |...
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~---------~~v~~~~~--------~~~~------------------- 71 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETK---------AHIYFINS--------EEPS------------------- 71 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC---------CCCEEEET--------TCGG-------------------
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcC---------CeEEEEEC--------CCcC-------------------
Confidence 478999999999999998 456888887652 45777765 1110
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
+....+.+.+.|++++.|+++++. +|+++.
T Consensus 72 --~~~~~~~~~~~~~i~~~Pt~~~~~-~G~~~~ 101 (118)
T 1zma_A 72 --QLNDLQAFRSRYGIPTVPGFVHIT-DGQINV 101 (118)
T ss_dssp --GHHHHHHHHHHHTCCSSCEEEEEE-TTEEEE
T ss_pred --cHHHHHHHHHHcCCCCCCeEEEEE-CCEEEE
Confidence 112234567889999999999995 888763
No 122
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.00025 Score=58.57 Aligned_cols=69 Identities=12% Similarity=0.223 Sum_probs=48.6
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
+||.|+++|.+.||++|. .+.|.+++++++ ..++.++.|.+ |++
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~------~~~~~~~~vd~--------~~~-------------------- 65 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPS------NSNVSFLSIDA--------DEN-------------------- 65 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGG------GTTSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcC------CCCEEEEEEec--------ccC--------------------
Confidence 379999999999999998 445777766653 13477777654 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ .+|+++.
T Consensus 66 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 90 (112)
T 3d6i_A 66 -------SEISELFEISAVPYFIII-HKGTILK 90 (112)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-ECCEEEE
Confidence 135677899999999998 6998875
No 123
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.46 E-value=0.00022 Score=60.33 Aligned_cols=68 Identities=6% Similarity=-0.021 Sum_probs=50.3
Q ss_pred ccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 165 LRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
++++ |+++|.+.||++|. .+.|.+++++.+. .++.++-|.+ |++
T Consensus 21 ~~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~------~~v~~~~vd~--------~~~------------------- 66 (126)
T 1x5e_A 21 LEGD-WMIEFYAPWCPACQNLQPEWESFAEWGED------LEVNIAKVDV--------TEQ------------------- 66 (126)
T ss_dssp TSSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGG------GTCEEEEEET--------TTC-------------------
T ss_pred hCCC-EEEEEECCCCHHHHHHhHHHHHHHHHhcc------CCeEEEEEEC--------cCC-------------------
Confidence 4454 99999999999998 4568888887741 2466776654 221
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
+.+.+.|++++.|+++++ ++|++.
T Consensus 67 --------~~~~~~~~v~~~Pt~~~~-~~G~~~ 90 (126)
T 1x5e_A 67 --------PGLSGRFIINALPTIYHC-KDGEFR 90 (126)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred --------HHHHHHcCCcccCEEEEE-eCCeEE
Confidence 125677899999999999 899864
No 124
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.45 E-value=0.00034 Score=59.01 Aligned_cols=68 Identities=13% Similarity=0.150 Sum_probs=51.2
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+|+|.+.||++|. .+.|.+++++.+ +++.++.|.+ |++
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~vd~--------d~~-------------------- 74 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQH-------GKVVMAKVDI--------DDH-------------------- 74 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TSSEEEEEET--------TTT--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEeC--------CCC--------------------
Confidence 478999999999999998 345777777653 2477777754 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 75 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 99 (119)
T 1w4v_A 75 -------TDLAIEYEVSAVPTVLAM-KNGDVVD 99 (119)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-eCCcEEE
Confidence 235677899999999999 8999864
No 125
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.45 E-value=0.00011 Score=63.87 Aligned_cols=73 Identities=8% Similarity=0.193 Sum_probs=50.3
Q ss_pred cccccCcEEEEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecC
Q 009735 162 IDVLRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHH 241 (527)
Q Consensus 162 Is~L~gK~VlLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf 241 (527)
++..+||.|+++|.+.||++|.. +...++++. ..|.++++.+ |.++
T Consensus 35 l~~~~~k~vvv~F~a~wC~~C~~--~~p~l~~l~-------~~~~v~~~~v--------d~~~----------------- 80 (133)
T 3cxg_A 35 FSSTQNSSIVIKFGAVWCKPCNK--IKEYFKNQL-------NYYYVTLVDI--------DVDI----------------- 80 (133)
T ss_dssp HTC-CCSEEEEEEECTTCHHHHH--THHHHHGGG-------GTEECEEEEE--------ETTT-----------------
T ss_pred HHhcCCCEEEEEEECCCCHHHHH--HHHHHHHHH-------HhcCEEEEEE--------eccc-----------------
Confidence 45567899999999999999985 344556653 1356777775 2221
Q ss_pred CCCCCHHHHHHHHHhhCCCCCcEEEEe-CCCCc--eec
Q 009735 242 PSAIDPAVIRYAKEKWDFRKKPILVVL-DPQGR--VVN 276 (527)
Q Consensus 242 ~~~i~~~~~r~ike~~~~~~iP~LVvL-~pqGk--v~~ 276 (527)
...+.+.|++++.|+++++ +++|+ ++.
T Consensus 81 --------~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~ 110 (133)
T 3cxg_A 81 --------HPKLNDQHNIKALPTFEFYFNLNNEWVLVH 110 (133)
T ss_dssp --------CHHHHHHTTCCSSSEEEEEEEETTEEEEEE
T ss_pred --------hHHHHHhcCCCCCCEEEEEEecCCCeEEEE
Confidence 0235677899999999999 55665 553
No 126
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.45 E-value=0.00033 Score=58.32 Aligned_cols=67 Identities=15% Similarity=0.157 Sum_probs=49.5
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+|+|.+.||++|. .+.|.+++++.+ ++.++-|.+ |+.
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--------~~~~~~vd~--------~~~-------------------- 66 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--------QADFYKLDV--------DEL-------------------- 66 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--------CCEEEEEEC--------CCC--------------------
Confidence 489999999999999998 445777776652 355665543 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|++++++ +|+.+.
T Consensus 67 -------~~l~~~~~v~~~Pt~~~~~-~G~~~~ 91 (109)
T 3f3q_A 67 -------GDVAQKNEVSAMPTLLLFK-NGKEVA 91 (109)
T ss_dssp -------HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred -------HHHHHHcCCCccCEEEEEE-CCEEEE
Confidence 2356778999999999998 898764
No 127
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.44 E-value=0.00037 Score=59.75 Aligned_cols=70 Identities=16% Similarity=0.190 Sum_probs=51.6
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|. .+.|.+++++++ ..+.++.++-|-+ |++
T Consensus 33 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~----~~~~~v~~~~vd~--------~~~-------------------- 80 (140)
T 2dj1_A 33 DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLK----DNDPPIAVAKIDA--------TSA-------------------- 80 (140)
T ss_dssp TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHH----SSSSCCEEEEECT--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHh----ccCCceEEEEEeC--------ccc--------------------
Confidence 579999999999999998 567999998886 2233455555422 110
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
..+.+.|++++.|+++++ .+|++.
T Consensus 81 -------~~~~~~~~v~~~Pt~~~~-~~G~~~ 104 (140)
T 2dj1_A 81 -------SMLASKFDVSGYPTIKIL-KKGQAV 104 (140)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred -------HHHHHHCCCCccCeEEEE-ECCcEE
Confidence 235677899999999999 789854
No 128
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.44 E-value=0.00034 Score=59.15 Aligned_cols=71 Identities=7% Similarity=0.055 Sum_probs=51.4
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+++|.+.||++|. .+.|.+++++++.. ...++.++-|.+ |++
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~~~~~vd~--------~~~-------------------- 72 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQ---TKGKVKLAAVDA--------TVN-------------------- 72 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHH---TTTSEEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhh---cCCcEEEEEEEC--------CCC--------------------
Confidence 478999999999999998 45688888887521 223466666643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
+.+.+.|++++.|+++++++ |+.+
T Consensus 73 -------~~l~~~~~v~~~Pt~~~~~~-g~~~ 96 (133)
T 1x5d_A 73 -------QVLASRYGIRGFPTIKIFQK-GESP 96 (133)
T ss_dssp -------CHHHHHHTCCSSSEEEEEET-TEEE
T ss_pred -------HHHHHhCCCCeeCeEEEEeC-CCce
Confidence 23556789999999999998 7744
No 129
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.42 E-value=0.00047 Score=55.83 Aligned_cols=68 Identities=12% Similarity=0.142 Sum_probs=50.5
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|. .+.|.++.++.+ +++.++-|.+ |+.
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 64 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYK-------GKAVFGRLNV--------DEN-------------------- 64 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhC-------CCceEEEEcc--------ccC--------------------
Confidence 589999999999999998 446777777663 2456665543 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+.+.
T Consensus 65 -------~~~~~~~~i~~~Pt~~~~-~~g~~~~ 89 (109)
T 3tco_A 65 -------QKIADKYSVLNIPTTLIF-VNGQLVD 89 (109)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhcCcccCCEEEEE-cCCcEEE
Confidence 134567899999999999 9998775
No 130
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.41 E-value=0.00028 Score=57.55 Aligned_cols=72 Identities=11% Similarity=0.104 Sum_probs=47.6
Q ss_pred ccCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 165 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
+++|.++++|.+.||++|.. +.|.++.++.+ ....++.++-|.+ |+..
T Consensus 19 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~----~~~~~~~~~~vd~--------~~~~------------------ 68 (111)
T 3uvt_A 19 IAEGITFIKFYAPWCGHCKTLAPTWEELSKKEF----PGLAGVKIAEVDC--------TAER------------------ 68 (111)
T ss_dssp HHSSEEEEEEECSSCHHHHHHHHHHHHHHTCCC----CC-CCEEEEEEET--------TTCH------------------
T ss_pred hcCCcEEEEEECCCChhHHHhhHHHHHHHHHhh----ccCCceEEEEEec--------cccH------------------
Confidence 34899999999999999984 34555444432 1223555555543 2221
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+.+.|++++.|+++++ ++|+.+.
T Consensus 69 ---------~l~~~~~v~~~Pt~~~~-~~g~~~~ 92 (111)
T 3uvt_A 69 ---------NICSKYSVRGYPTLLLF-RGGKKVS 92 (111)
T ss_dssp ---------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ---------hHHHhcCCCcccEEEEE-eCCcEEE
Confidence 25677899999999998 7787653
No 131
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.40 E-value=0.00033 Score=67.76 Aligned_cols=68 Identities=16% Similarity=0.239 Sum_probs=53.7
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
+||.|+++|.+.||++|. .+.|.+++++.+ +++.++-|.+ |+..
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~-------~~~~~~~vd~--------~~~~------------------- 70 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPILESLAAQYN-------GQFILAKLDC--------DAEQ------------------- 70 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHT-------SSSEEEEEET--------TTCH-------------------
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHHHHcC-------CCeEEEEEeC--------ccCH-------------------
Confidence 489999999999999998 677888888874 2477777754 2221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+.+.|+++++|+++++ .+|+++.
T Consensus 71 --------~~~~~~~v~~~Pt~~~~-~~G~~~~ 94 (287)
T 3qou_A 71 --------MIAAQFGLRAIPTVYLF-QNGQPVD 94 (287)
T ss_dssp --------HHHHTTTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHcCCCCCCeEEEE-ECCEEEE
Confidence 45678899999999999 6898774
No 132
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.40 E-value=0.00023 Score=58.46 Aligned_cols=67 Identities=9% Similarity=0.176 Sum_probs=42.6
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|.. +.|.++.++. +++.++-|.+ |+..
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~--------~~~~~~~vd~--------~~~~------------------- 61 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENY--------NYVEKIEILL--------QDMQ------------------- 61 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTC--------TTEEEEEEEE--------CCC--------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHc--------CCceEEEEEC--------CCCH-------------------
Confidence 5899999999999999984 4565555443 2466666654 2111
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+.+.|++++.|+++++. +|+++.
T Consensus 62 --------~l~~~~~v~~~Pt~~~~~-~G~~~~ 85 (105)
T 4euy_A 62 --------EIAGRYAVFTGPTVLLFY-NGKEIL 85 (105)
T ss_dssp ----------------CCCCEEEEEE-TTEEEE
T ss_pred --------HHHHhcCCCCCCEEEEEe-CCeEEE
Confidence 244667999999999995 898874
No 133
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.39 E-value=0.00051 Score=54.86 Aligned_cols=67 Identities=9% Similarity=0.080 Sum_probs=49.8
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|.. +.|.++.++.+ ++.++.|.+ |++
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--------~~~~~~v~~--------~~~-------------------- 58 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYP--------QVGFGKLNS--------DEN-------------------- 58 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcC--------CceEEEEEC--------CCC--------------------
Confidence 5899999999999999983 45666665542 277777754 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 59 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 83 (104)
T 2e0q_A 59 -------PDIAARYGVMSLPTVIFF-KDGEPVD 83 (104)
T ss_dssp -------HHHHHHTTCCSSCEEEEE-ETTEEEE
T ss_pred -------HHHHHhCCccccCEEEEE-ECCeEhh
Confidence 125567899999999999 8999864
No 134
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.38 E-value=0.00047 Score=56.32 Aligned_cols=67 Identities=12% Similarity=0.267 Sum_probs=50.3
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|.. +.|.++.++.. +++.++.|.+ |+.
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~-------~~v~~~~vd~--------~~~-------------------- 65 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYE-------ESFGFYYVDV--------EEE-------------------- 65 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--------TTC--------------------
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcC-------CceEEEEEEC--------CcC--------------------
Confidence 4789999999999999983 45777766652 2577777754 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
+.+.+.|++++.|+++++ .+|+.+
T Consensus 66 -------~~l~~~~~v~~~Pt~~~~-~~g~~~ 89 (111)
T 3gnj_A 66 -------KTLFQRFSLKGVPQILYF-KDGEYK 89 (111)
T ss_dssp -------HHHHHHTTCCSSCEEEEE-ETTEEE
T ss_pred -------hhHHHhcCCCcCCEEEEE-ECCEEE
Confidence 135677899999999999 688876
No 135
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.37 E-value=0.00045 Score=56.64 Aligned_cols=67 Identities=4% Similarity=-0.032 Sum_probs=48.7
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|.. +.|.++.++. .++.++.|.+ |+.
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~--------~~~~~~~vd~--------~~~-------------------- 63 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY--------PQAVFLEVDV--------HQC-------------------- 63 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC--------TTSEEEEEET--------TTS--------------------
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHC--------CCcEEEEEEC--------ccC--------------------
Confidence 5899999999999999983 4566665553 2466666654 222
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ .+|+.+.
T Consensus 64 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (107)
T 1gh2_A 64 -------QGTAATNNISATPTFQFF-RNKVRID 88 (107)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhcCCCcccEEEEE-ECCeEEE
Confidence 225577899999999999 7888764
No 136
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.36 E-value=0.00033 Score=59.08 Aligned_cols=68 Identities=10% Similarity=0.132 Sum_probs=48.7
Q ss_pred ccCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 165 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
.++|.|+++|.+.||++|.. +.|.+++++. .++.++-|.+ |+.
T Consensus 29 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~--------~~v~~~~vd~--------d~~------------------- 73 (116)
T 3qfa_C 29 AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKY--------SNVIFLEVDV--------DDC------------------- 73 (116)
T ss_dssp HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTC--------TTSEEEEEET--------TTT-------------------
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--------CCCEEEEEEC--------CCC-------------------
Confidence 47899999999999999983 3465555443 2266666643 211
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ .+|+.+.
T Consensus 74 --------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 98 (116)
T 3qfa_C 74 --------QDVASECEVKSMPTFQFF-KKGQKVG 98 (116)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-SSSSEEE
T ss_pred --------HHHHHHcCCccccEEEEE-eCCeEEE
Confidence 235677899999999999 7898764
No 137
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.36 E-value=0.0005 Score=58.06 Aligned_cols=67 Identities=7% Similarity=0.089 Sum_probs=49.6
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
+||.|+++|.+.||++|. .+.|.+++++.. ++.++.|.+ |++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~--------~v~~~~vd~--------~~~-------------------- 72 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYP--------DVRFVKCDV--------DES-------------------- 72 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CCEEEEEEC--------CCC--------------------
Confidence 589999999999999998 456777776652 266666653 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 73 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 97 (114)
T 2oe3_A 73 -------PDIAKECEVTAMPTFVLG-KDGQLIG 97 (114)
T ss_dssp -------HHHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred -------HHHHHHCCCCcccEEEEE-eCCeEEE
Confidence 125577899999999887 8998864
No 138
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.35 E-value=0.00025 Score=61.25 Aligned_cols=68 Identities=18% Similarity=0.231 Sum_probs=51.2
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|. .+.|.++.++.+ +++.++.|.+ |++.
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~--------~~~~------------------- 84 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQ-------GKLTVAKLNI--------DQNP------------------- 84 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTT-------TTEEEEEEET--------TTCC-------------------
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCeEEEEEEC--------CCCH-------------------
Confidence 479999999999999998 456777777663 2477777754 2210
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+.+.|++++.|+++++ ++|+++.
T Consensus 85 --------~l~~~~~v~~~Pt~~~~-~~G~~~~ 108 (128)
T 2o8v_B 85 --------GTAPKYGIRGIPTLLLF-KNGEVAA 108 (128)
T ss_dssp --------TTSGGGTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHcCCCccCEEEEE-eCCEEEE
Confidence 13456899999999999 8999864
No 139
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.34 E-value=0.00092 Score=55.70 Aligned_cols=70 Identities=14% Similarity=0.193 Sum_probs=48.9
Q ss_pred ccCcEEEEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCC
Q 009735 165 LRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 244 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~ 244 (527)
.++|.++++|.+.||++|... ...++++.+ .-.++.++.|.+ |+.
T Consensus 17 ~~~~~~vv~f~a~wC~~C~~~--~~~l~~~~~----~~~~v~~~~vd~--------~~~--------------------- 61 (110)
T 2l6c_A 17 EGLSDAIVFFHKNLCPHCKNM--EKVLDKFGA----RAPQVAISSVDS--------EAR--------------------- 61 (110)
T ss_dssp TTCSEEEEEEECSSCSTHHHH--HHHHHHHHT----TCTTSCEEEEEG--------GGC---------------------
T ss_pred HcCCCEEEEEECCCCHhHHHH--HHHHHHHHH----HCCCcEEEEEcC--------cCC---------------------
Confidence 357899999999999999843 334445532 122566776653 221
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 245 IDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 245 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 62 ------~~l~~~~~v~~~Pt~~~~-~~G~~v~ 86 (110)
T 2l6c_A 62 ------PELMKELGFERVPTLVFI-RDGKVAK 86 (110)
T ss_dssp ------HHHHHHTTCCSSCEEEEE-ESSSEEE
T ss_pred ------HHHHHHcCCcccCEEEEE-ECCEEEE
Confidence 225677899999999999 8998874
No 140
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.34 E-value=0.00062 Score=58.34 Aligned_cols=67 Identities=7% Similarity=0.201 Sum_probs=48.8
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
+||.|+++|.+.||++|. .+.|.+++++.. ++.++.|.+ |++
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--------d~~-------------------- 80 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--------NVLFLKVDT--------DEL-------------------- 80 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--------SEEEEEEET--------TTS--------------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CcEEEEEEC--------ccC--------------------
Confidence 589999999999999998 345766666541 466665543 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 81 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 105 (124)
T 1xfl_A 81 -------KSVASDWAIQAMPTFMFL-KEGKILD 105 (124)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCccCEEEEE-ECCEEEE
Confidence 235567899999999888 8999874
No 141
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.33 E-value=0.00071 Score=57.25 Aligned_cols=66 Identities=5% Similarity=-0.045 Sum_probs=50.1
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+++|.+.||++|. .+.|.+++++++ +.+.++.|.+ |+.
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~-------~~~~~~~vd~--------~~~-------------------- 78 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALK-------DVVKVGAVNA--------DKH-------------------- 78 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTT-------TTSEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhc-------CceEEEEEeC--------CCC--------------------
Confidence 378999999999999998 567888887763 2366666643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCc
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGR 273 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGk 273 (527)
+.+.+.|++++.|++++++++|+
T Consensus 79 -------~~l~~~~~v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 79 -------QSLGGQYGVQGFPTIKIFGANKN 101 (130)
T ss_dssp -------HHHHHHHTCCSSSEEEEESSCTT
T ss_pred -------HHHHHHcCCCccCEEEEEeCCCC
Confidence 23556789999999999999987
No 142
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.33 E-value=0.00043 Score=57.17 Aligned_cols=69 Identities=14% Similarity=0.080 Sum_probs=48.6
Q ss_pred ccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 165 LRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
.+||.|+++|.+.||++|. .+.|.+++++.+ ++.++-|.+ |.+
T Consensus 22 ~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--------~v~~~~vd~--------~~~------------------- 66 (111)
T 2pu9_C 22 AGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--------DVIFLKLDC--------NQE------------------- 66 (111)
T ss_dssp CTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEEC--------SST-------------------
T ss_pred cCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--------CeEEEEEec--------Ccc-------------------
Confidence 4689999999999999998 456777776652 355555543 210
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
. ..+.+.|++++.|++ +++++|+++.
T Consensus 67 ~-------~~~~~~~~v~~~Pt~-~~~~~G~~~~ 92 (111)
T 2pu9_C 67 N-------KTLAKELGIRVVPTF-KILKENSVVG 92 (111)
T ss_dssp T-------HHHHHHHCCSBSSEE-EEESSSSEEE
T ss_pred h-------HHHHHHcCCCeeeEE-EEEeCCcEEE
Confidence 1 245577899999995 5568999764
No 143
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.31 E-value=0.00035 Score=58.54 Aligned_cols=68 Identities=7% Similarity=-0.075 Sum_probs=50.9
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+++|.+.||++|. .+.|.+++++++ +++.++-|.+ |+.
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~vd~--------~~~-------------------- 64 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIK-------GKVRAGKVDC--------QAY-------------------- 64 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEeC--------cCC--------------------
Confidence 478999999999999998 456888887773 2466666654 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
..+.+.|++++.|++++++++|++.
T Consensus 65 -------~~~~~~~~v~~~Pt~~~~~~~~~~~ 89 (122)
T 3aps_A 65 -------PQTCQKAGIKAYPSVKLYQYERAKK 89 (122)
T ss_dssp -------HHHHHHTTCCSSSEEEEEEEEGGGT
T ss_pred -------HHHHHHcCCCccceEEEEeCCCccc
Confidence 1255678999999999999888754
No 144
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.31 E-value=0.00071 Score=54.55 Aligned_cols=68 Identities=10% Similarity=0.127 Sum_probs=49.7
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.++++|.+.||++|. .+.|.++.++.+ +++.++.|.+ |++
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 61 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYS-------GKIAVYKLNT--------DEA-------------------- 61 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhc-------CceEEEEEcC--------cch--------------------
Confidence 478999999999999998 445777777663 2466666653 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 62 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 86 (105)
T 1fb6_A 62 -------PGIATQYNIRSIPTVLFF-KNGERKE 86 (105)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhCCCCcccEEEEE-eCCeEEE
Confidence 135567899999998888 6998764
No 145
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.30 E-value=0.00051 Score=55.56 Aligned_cols=68 Identities=9% Similarity=0.093 Sum_probs=48.6
Q ss_pred ccCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 165 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
.++|.|+++|.+.||++|.. +.|.++.++.+ ++.++.|.. |+.
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--------~~~~~~vd~--------~~~------------------- 62 (105)
T 3m9j_A 18 AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS--------NVIFLEVDV--------DDC------------------- 62 (105)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST--------TSEEEEEET--------TTC-------------------
T ss_pred cCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc--------CeEEEEEEh--------hhh-------------------
Confidence 46899999999999999983 45666655542 256665543 211
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ .+|+.+.
T Consensus 63 --------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 87 (105)
T 3m9j_A 63 --------QDVASESEVKSMPTFQFF-KKGQKVG 87 (105)
T ss_dssp --------HHHHHHTTCCBSSEEEEE-ETTEEEE
T ss_pred --------HHHHHHcCCCcCcEEEEE-ECCeEEE
Confidence 235567899999999999 7888764
No 146
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.30 E-value=0.0004 Score=59.79 Aligned_cols=68 Identities=13% Similarity=0.171 Sum_probs=50.7
Q ss_pred ccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 165 LRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
.+||.|+++|.+.||++|. .+.|.+++++. .++.++.|.+ |+.
T Consensus 44 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~--------~~v~~~~v~~--------~~~------------------- 88 (139)
T 3d22_A 44 RDGKIVLANFSARWCGPSRQIAPYYIELSENY--------PSLMFLVIDV--------DEL------------------- 88 (139)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHC--------TTSEEEEEET--------TTS-------------------
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--------CCCEEEEEeC--------ccc-------------------
Confidence 4699999999999999998 44576666554 2466666654 211
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 89 --------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 113 (139)
T 3d22_A 89 --------SDFSASWEIKATPTFFFL-RDGQQVD 113 (139)
T ss_dssp --------HHHHHHTTCCEESEEEEE-ETTEEEE
T ss_pred --------HHHHHHcCCCcccEEEEE-cCCeEEE
Confidence 235677899999999988 8999874
No 147
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.30 E-value=0.00029 Score=59.94 Aligned_cols=69 Identities=7% Similarity=0.089 Sum_probs=49.1
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|. .+.|.+++++++ ...++.++.|-+ |+. +.
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-----~~~~~~~~~vd~--------~~~------------------~~ 72 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYK-----GQKDLVIAKMDA--------TAN------------------DI 72 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHT-----TSSSEEEEEECT--------TTS------------------CC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhc-----CCCCEEEEEecC--------CcC------------------HH
Confidence 489999999999999998 456888888874 223455555422 111 11
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCce
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRV 274 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv 274 (527)
+.+.|++++.|+++++++.|++
T Consensus 73 ---------~~~~~~v~~~Pt~~~~~~g~~~ 94 (133)
T 2dj3_A 73 ---------TNDQYKVEGFPTIYFAPSGDKK 94 (133)
T ss_dssp ---------CCSSCCCSSSSEEEEECTTCTT
T ss_pred ---------HHhhcCCCcCCEEEEEeCCCcc
Confidence 1246799999999999987754
No 148
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.30 E-value=0.00055 Score=60.66 Aligned_cols=67 Identities=12% Similarity=0.165 Sum_probs=50.0
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|.. +.|.+++++. .++.++-|.+ |+.
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~--------~~v~~~~vd~--------~~~-------------------- 74 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKEL--------PQVSFVKLEA--------EGV-------------------- 74 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHC--------TTSEEEEEET--------TTS--------------------
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHc--------CCeEEEEEEC--------CCC--------------------
Confidence 4899999999999999983 4566666553 2467776654 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
+.+.+.|++++.|++++++ +|+++.
T Consensus 75 -------~~l~~~~~v~~~Pt~~~~~-~G~~~~ 99 (153)
T 2wz9_A 75 -------PEVSEKYEISSVPTFLFFK-NSQKID 99 (153)
T ss_dssp -------HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred -------HHHHHHcCCCCCCEEEEEE-CCEEEE
Confidence 1356778999999999999 999874
No 149
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.29 E-value=0.00055 Score=56.14 Aligned_cols=67 Identities=12% Similarity=0.107 Sum_probs=49.5
Q ss_pred CcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCC
Q 009735 167 RKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 244 (527)
Q Consensus 167 gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~ 244 (527)
+|.|+++|.+.||++|. .+.|.++.++.. +++.++.|.+ |++
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--------~~~--------------------- 67 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYA-------GKVIFLKVDV--------DAV--------------------- 67 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--------TTT---------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-------CCeEEEEEEC--------Cch---------------------
Confidence 89999999999999998 345777776652 2577777653 211
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 245 IDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 245 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 68 ------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 92 (112)
T 1ep7_A 68 ------AAVAEAAGITAMPTFHVY-KDGVKAD 92 (112)
T ss_dssp ------HHHHHHHTCCBSSEEEEE-ETTEEEE
T ss_pred ------HHHHHHcCCCcccEEEEE-ECCeEEE
Confidence 235567899999998877 7999864
No 150
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.29 E-value=0.00062 Score=57.66 Aligned_cols=70 Identities=16% Similarity=0.176 Sum_probs=46.1
Q ss_pred ccCcEEEEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCC
Q 009735 165 LRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 244 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~ 244 (527)
-.+|.|++.|.|.||+||.. +...++++.+. -.+ ++|+-+ |.++
T Consensus 18 ~~~k~vvv~F~a~wC~~C~~--~~p~~~~~~~~----~~~--~~~~~v--------d~d~-------------------- 61 (105)
T 3zzx_A 18 AGNKLVVIDFYATWCGPCKM--IAPKLEELSQS----MSD--VVFLKV--------DVDE-------------------- 61 (105)
T ss_dssp TTTSEEEEEEECTTCHHHHH--HHHHHHHHHHH----CTT--EEEEEE--------ETTT--------------------
T ss_pred cCCCEEEEEEECCCCCCccC--CCcchhhhhhc----cCC--eEEEEE--------eccc--------------------
Confidence 34789999999999999983 33344444321 123 555554 2221
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 245 IDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 245 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
. ..|.+.|++++.|+++++ .+|+.+.
T Consensus 62 -~----~~l~~~~~V~~~PT~~~~-~~G~~v~ 87 (105)
T 3zzx_A 62 -C----EDIAQDNQIACMPTFLFM-KNGQKLD 87 (105)
T ss_dssp -C----HHHHHHTTCCBSSEEEEE-ETTEEEE
T ss_pred -C----HHHHHHcCCCeecEEEEE-ECCEEEE
Confidence 0 235678899999999888 6898875
No 151
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.28 E-value=0.00042 Score=58.78 Aligned_cols=67 Identities=9% Similarity=0.079 Sum_probs=49.5
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+++|.+.||++|. .+.|.+++++. .++.++.|.+ |+.
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--------~~v~~~~vd~--------~~~-------------------- 65 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLGQILPSIAEAN--------KDVTFIKVDV--------DKN-------------------- 65 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--------TTSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--------CCeEEEEEEC--------CCC--------------------
Confidence 389999999999999998 34576666554 3477777754 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCC---CCcee
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDP---QGRVV 275 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~p---qGkv~ 275 (527)
..+.+.|++++.|+++++++ +|+++
T Consensus 66 -------~~~~~~~~i~~~Pt~~~~~~~~~~G~~~ 93 (118)
T 2f51_A 66 -------GNAADAYGVSSIPALFFVKKEGNEIKTL 93 (118)
T ss_dssp -------HHHHHHTTCCSSSEEEEEEEETTEEEEE
T ss_pred -------HHHHHhcCCCCCCEEEEEeCCCCcceEE
Confidence 22567889999999999987 47765
No 152
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.36 E-value=4.1e-05 Score=65.18 Aligned_cols=77 Identities=12% Similarity=0.206 Sum_probs=52.0
Q ss_pred ceeecccccCcEEEEEEecCCCChhHH--HHH---HHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc
Q 009735 158 RKVSIDVLRRKSVLLLVSDLDVSNEEL--FLL---EQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 232 (527)
Q Consensus 158 ~kV~Is~L~gK~VlLyfSal~~~~~~~--~~L---~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~ 232 (527)
..+.....+||.|+|+|.+.||++|.. +.| .++.+.++ .++.++-|.+ |.++
T Consensus 10 ~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~-------~~~~~~~vd~--------~~~~-------- 66 (130)
T 2lst_A 10 EALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLE-------ARFVVASVSV--------DTPE-------- 66 (130)
Confidence 355666678999999999999999984 335 44444432 2455555543 1110
Q ss_pred CCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCC-Cce
Q 009735 233 MMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQ-GRV 274 (527)
Q Consensus 233 ~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pq-Gkv 274 (527)
...+.+.|++++.|+++++||+ |++
T Consensus 67 -----------------~~~~~~~~~v~~~Pt~~~~d~~~G~~ 92 (130)
T 2lst_A 67 -----------------GQELARRYRVPGTPTFVFLVPKAGAW 92 (130)
Confidence 1235567799999999999985 776
No 153
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=97.24 E-value=0.00039 Score=61.60 Aligned_cols=69 Identities=6% Similarity=0.014 Sum_probs=51.7
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+++|.|.||++|. .+.|.+++++.+ +++.++.|-+ |+. ++
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~--------d~~------------------~~ 68 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVK-------NFAVIYLVDI--------TEV------------------PD 68 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHT-------TTEEEEEEET--------TTC------------------CT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC-------CCeEEEEEcc--------ccC------------------HH
Confidence 489999999999999998 457888888773 2477777754 221 11
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
+.+.|++++.|+++++. +|+.+..
T Consensus 69 ---------~~~~~~i~~~Pt~~~~~-~G~~v~~ 92 (142)
T 1qgv_A 69 ---------FNKMYELYDPCTVMFFF-RNKHIMI 92 (142)
T ss_dssp ---------TTTSSCSCSSCEEEEEE-TTEEEEE
T ss_pred ---------HHHHcCCCCCCEEEEEE-CCcEEEE
Confidence 34678999999999994 7888753
No 154
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=97.23 E-value=6.7e-05 Score=67.99 Aligned_cols=77 Identities=14% Similarity=0.157 Sum_probs=51.5
Q ss_pred eecccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCce
Q 009735 160 VSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWF 237 (527)
Q Consensus 160 V~Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWy 237 (527)
+.....+||.|+|+|.+.||++|. .+.|.++.+..+ .+..++.|.+ |.+.+.
T Consensus 39 ~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~-------~~~~~~~v~~--------d~~~~~----------- 92 (164)
T 1sen_A 39 KKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISE-------LSHNFVMVNL--------EDEEEP----------- 92 (164)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHH-------HHTTSEEEEE--------EGGGSC-----------
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhh-------cCCeEEEEEe--------cCCchH-----------
Confidence 344557899999999999999998 445666544332 1256777765 222210
Q ss_pred eecCCCCCCHHHHHHHHHhhCC--CCCcEEEEeCCCCceecc
Q 009735 238 SVHHPSAIDPAVIRYAKEKWDF--RKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 238 AVpf~~~i~~~~~r~ike~~~~--~~iP~LVvL~pqGkv~~~ 277 (527)
+.+.|++ +++|+++++|++|+++..
T Consensus 93 ---------------~~~~~~~~~~~~Pt~~~~d~~G~~~~~ 119 (164)
T 1sen_A 93 ---------------KDEDFSPDGGYIPRILFLDPSGKVHPE 119 (164)
T ss_dssp ---------------SCGGGCTTCSCSSEEEEECTTSCBCTT
T ss_pred ---------------HHHHhcccCCcCCeEEEECCCCCEEEE
Confidence 0123455 569999999999999854
No 155
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.23 E-value=0.00087 Score=57.88 Aligned_cols=69 Identities=6% Similarity=0.057 Sum_probs=49.3
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|. .+.|.+++++.+ +.++.++.|-+ |+..
T Consensus 25 ~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~------~~~v~~~~vd~--------~~~~------------------- 71 (137)
T 2dj0_A 25 KRVTWIVEFFANWSNDCQSFAPIYADLSLKYN------CTGLNFGKVDV--------GRYT------------------- 71 (137)
T ss_dssp TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHC------SSSCEEEECCT--------TTCH-------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC------CCCeEEEEEeC--------ccCH-------------------
Confidence 456899999999999998 567888888773 22466665533 2221
Q ss_pred CCCHHHHHHHHHhhCCC------CCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~ 276 (527)
.+.+.|+++ +.|+++++ .+|+++.
T Consensus 72 --------~~~~~~~v~~~~~~~~~Pt~~~~-~~G~~~~ 101 (137)
T 2dj0_A 72 --------DVSTRYKVSTSPLTKQLPTLILF-QGGKEAM 101 (137)
T ss_dssp --------HHHHHTTCCCCSSSSCSSEEEEE-SSSSEEE
T ss_pred --------HHHHHccCcccCCcCCCCEEEEE-ECCEEEE
Confidence 134556776 99999999 7898875
No 156
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.23 E-value=0.00092 Score=55.48 Aligned_cols=67 Identities=12% Similarity=0.100 Sum_probs=48.8
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
+||.|+++|.+.||++|. .+.|.+++++.+ ++.++.|.+ |+..
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--------~~~~------------------- 69 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--------KMVFIKVDV--------DEVS------------------- 69 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTTH-------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--------CCEEEEEEC--------CCCH-------------------
Confidence 689999999999999998 345777766541 366666654 2211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+.+.|++.+.|+++++ ++|+++.
T Consensus 70 --------~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (112)
T 1syr_A 70 --------EVTEKENITSMPTFKVY-KNGSSVD 93 (112)
T ss_dssp --------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHcCCCcccEEEEE-ECCcEEE
Confidence 35567899999998877 5898864
No 157
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.21 E-value=0.0016 Score=59.43 Aligned_cols=100 Identities=6% Similarity=0.006 Sum_probs=64.3
Q ss_pred ceeecccc-cCc-EEEEEEecCCCChhH---HHHHHHHHHHHhhhccCCCCCeE-EEEEeccCCCCCcchhhHHHHHHhh
Q 009735 158 RKVSIDVL-RRK-SVLLLVSDLDVSNEE---LFLLEQMYRESRQLSSRTESQYE-VVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 158 ~kV~Is~L-~gK-~VlLyfSal~~~~~~---~~~L~~iY~~lk~~~~~~~~~fE-IVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
+.|+++++ +|| .|+++|=+.|||+|. ++.|.+.|+++++ .+++ ||-|+. | +....++|-+-.
T Consensus 33 ~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~------~g~~~vv~Is~-d-----~~~~~~~~~~~~ 100 (171)
T 2pwj_A 33 STTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKA------KGVDSVICVAI-N-----DPYTVNAWAEKI 100 (171)
T ss_dssp CCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHH------TTCSEEEEEES-S-----CHHHHHHHHHHT
T ss_pred ceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEeC-C-----CHHHHHHHHHHh
Confidence 78999996 996 556788999999986 5669999999963 3588 999985 3 233455665543
Q ss_pred cC-CCceeecCCCCCCHHHHHHHHHhhCCC--------C---CcEEEEeCCCCceecc
Q 009735 232 YM-MPWFSVHHPSAIDPAVIRYAKEKWDFR--------K---KPILVVLDPQGRVVNQ 277 (527)
Q Consensus 232 ~~-MPWyAVpf~~~i~~~~~r~ike~~~~~--------~---iP~LVvL~pqGkv~~~ 277 (527)
.- .|+..+--++ .+ +.+.|++. | .|.-+++| +|++...
T Consensus 101 ~~~~~fp~l~D~~---~~----~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~ 150 (171)
T 2pwj_A 101 QAKDAIEFYGDFD---GS----FHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKAL 150 (171)
T ss_dssp TCTTTSEEEECTT---CH----HHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEE
T ss_pred CCCCceEEEECCc---cH----HHHHhCCccccccccCCcccceeEEEEE-CCEEEEE
Confidence 31 2222222111 22 33445553 2 45666677 9999864
No 158
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.20 E-value=0.00089 Score=55.99 Aligned_cols=67 Identities=9% Similarity=0.150 Sum_probs=48.9
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|. .+.|.+++++.+ ++.++.|.+ |++
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~vd~--------~~~-------------------- 76 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFP--------NAVFLKVDV--------DEL-------------------- 76 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CcEEEEEEC--------CCC--------------------
Confidence 489999999999999998 345777666542 266666653 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 77 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 101 (122)
T 2vlu_A 77 -------KPIAEQFSVEAMPTFLFM-KEGDVKD 101 (122)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-eCCEEEE
Confidence 235567899999998877 7998863
No 159
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.18 E-value=0.0011 Score=54.97 Aligned_cols=68 Identities=18% Similarity=0.244 Sum_probs=50.0
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.++++|.+.||++|.. +.|.++.++.+ .++.++.|.+ |++
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 73 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERA-------TDLTVAKLDV--------DTN-------------------- 73 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEEC--------CCC--------------------
Confidence 4789999999999999983 45776666652 3477777764 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 74 -------~~~~~~~~i~~~Pt~~~~-~~g~~~~ 98 (121)
T 2i1u_A 74 -------PETARNFQVVSIPTLILF-KDGQPVK 98 (121)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhcCCCcCCEEEEE-ECCEEEE
Confidence 125567899999999988 5998864
No 160
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.16 E-value=0.00096 Score=57.54 Aligned_cols=67 Identities=7% Similarity=0.059 Sum_probs=49.4
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|. .+.|.++.++. .++.++.|.+ |++
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--------~~v~~~~vd~--------d~~-------------------- 79 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEF--------PTVKFAKVDA--------DNN-------------------- 79 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHC--------TTSEEEEEET--------TTC--------------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHC--------CCCEEEEEEC--------CCC--------------------
Confidence 578999999999999998 44576666554 2477777654 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 80 -------~~l~~~~~v~~~Pt~~i~-~~G~~~~ 104 (125)
T 1r26_A 80 -------SEIVSKCRVLQLPTFIIA-RSGKMLG 104 (125)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-eCCeEEE
Confidence 135667899999998887 8998764
No 161
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=97.16 E-value=0.00054 Score=61.11 Aligned_cols=67 Identities=10% Similarity=0.048 Sum_probs=49.3
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|++.|.|.||++|. .+.|.+++++.+ +.+.++-|-+ |+.
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~-------~~~~~~~vd~--------d~~-------------------- 66 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLS-------KMAAIYLVDV--------DQT-------------------- 66 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTT-------TTEEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CceEEEEEEC--------CcC--------------------
Confidence 389999999999999998 456777776552 2366666543 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
..+.+.|++.+.|+++ +.++|+.+
T Consensus 67 -------~~l~~~~~v~~~Pt~~-~~~~G~~v 90 (149)
T 3gix_A 67 -------AVYTQYFDISYIPSTV-FFFNGQHM 90 (149)
T ss_dssp -------CHHHHHTTCCSSSEEE-EEETTEEE
T ss_pred -------HHHHHHcCCCccCeEE-EEECCeEE
Confidence 1255778999999999 77899988
No 162
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.15 E-value=0.00092 Score=59.88 Aligned_cols=86 Identities=8% Similarity=0.023 Sum_probs=59.0
Q ss_pred CCccccCCCC--ceeecccc--cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcch
Q 009735 148 QLPLVECPTK--RKVSIDVL--RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTE 221 (527)
Q Consensus 148 ~~pl~dg~~~--~kV~Is~L--~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D 221 (527)
.+|+|+|..- ..-..+.+ .+|.|+++|.+.||++|. .+.|.+++++++ +++.++-|.+ |
T Consensus 41 ~~~~~~~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~-------~~v~~~~vd~--------~ 105 (155)
T 2ppt_A 41 GAGLITGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLA-------GQVRLAKIDT--------Q 105 (155)
T ss_dssp CCBSCCSSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTCEEEEEET--------T
T ss_pred CccccCCCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CCEEEEEEeC--------C
Confidence 4677766421 11112223 589999999999999998 456888888873 2466666653 2
Q ss_pred hhHHHHHHhhcCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 222 AKEHKFEALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 222 ~~~~~F~~~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
++ ..+.+.|+++++|+++++ ++|+++.
T Consensus 106 ~~---------------------------~~l~~~~~i~~~Pt~~~~-~~G~~~~ 132 (155)
T 2ppt_A 106 AH---------------------------PAVAGRHRIQGIPAFILF-HKGRELA 132 (155)
T ss_dssp TS---------------------------THHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred cc---------------------------HHHHHHcCCCcCCEEEEE-eCCeEEE
Confidence 11 135678899999999999 7999864
No 163
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.14 E-value=0.00042 Score=56.96 Aligned_cols=70 Identities=9% Similarity=0.052 Sum_probs=49.5
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|. .+.|.+++++++ ..+.++.++-|-+ ++ .+
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~----~~~~~v~~~~vd~--------~~------------------~~- 71 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLK----AEGSEIRLAKVDA--------TE------------------ES- 71 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTT----TTCCCCBCEEEET--------TT------------------CC-
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHh----ccCCcEEEEEEcC--------CC------------------CH-
Confidence 589999999999999998 567888888775 2233455554432 11 11
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
.+.+.|++++.|+++++ ++|+.+
T Consensus 72 --------~~~~~~~v~~~Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 72 --------DLAQQYGVRGYPTIKFF-RNGDTA 94 (120)
T ss_dssp --------SSHHHHTCCSSSEEEEE-ESSCSS
T ss_pred --------HHHHHCCCCcccEEEEE-eCCCcC
Confidence 23456799999999999 688765
No 164
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.11 E-value=0.00098 Score=58.03 Aligned_cols=67 Identities=18% Similarity=0.219 Sum_probs=50.5
Q ss_pred CcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCC
Q 009735 167 RKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 244 (527)
Q Consensus 167 gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~ 244 (527)
+|.|+++|.+.||++|. .+.|.++.++.+ +++.++.|.+ |+.
T Consensus 24 ~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--------~~~--------------------- 67 (140)
T 3hz4_A 24 KKPVVVMFYSPACPYCKAMEPYFEEYAKEYG-------SSAVFGRINI--------ATN--------------------- 67 (140)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTSEEEEEET--------TTC---------------------
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhC-------CceEEEEEEC--------CcC---------------------
Confidence 89999999999999998 456888877764 2477777653 222
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 245 IDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 245 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ .+|+.+.
T Consensus 68 ------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 92 (140)
T 3hz4_A 68 ------PWTAEKYGVQGTPTFKFF-CHGRPVW 92 (140)
T ss_dssp ------HHHHHHHTCCEESEEEEE-ETTEEEE
T ss_pred ------HhHHHHCCCCcCCEEEEE-eCCcEEE
Confidence 135567899999999999 7888763
No 165
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.10 E-value=0.0013 Score=52.88 Aligned_cols=68 Identities=13% Similarity=0.172 Sum_probs=48.8
Q ss_pred ccCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 165 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
.+||.++++|.+.||++|.. +.|.++.++. .++.++.|.+ |+.
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~--------~~~~~~~v~~--------~~~------------------- 61 (104)
T 2vim_A 17 NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEI--------PEVEFAKVDV--------DQN------------------- 61 (104)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC--------TTSEEEEEET--------TTC-------------------
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHC--------CCCEEEEEec--------cCC-------------------
Confidence 36899999999999999983 4566655543 1477777754 211
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|++++++ +|+++.
T Consensus 62 --------~~~~~~~~v~~~Pt~~~~~-~g~~~~ 86 (104)
T 2vim_A 62 --------EEAAAKYSVTAMPTFVFIK-DGKEVD 86 (104)
T ss_dssp --------HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred --------HHHHHHcCCccccEEEEEe-CCcEEE
Confidence 2355678999999988885 898765
No 166
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=97.10 E-value=0.00017 Score=65.72 Aligned_cols=93 Identities=12% Similarity=0.153 Sum_probs=59.0
Q ss_pred ccCcEEEEEEecCCCChhHH--HHHHH---HHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceee
Q 009735 165 LRRKSVLLLVSDLDVSNEEL--FLLEQ---MYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSV 239 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~--~~L~~---iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAV 239 (527)
-+||.|+|.|+|.||++|.. +.+.+ +.+.++ ..+|.|-+ |.+.
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~---------~~fv~V~v--------D~e~--------------- 89 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ---------NKFIMLNL--------MHET--------------- 89 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH---------HTCEEEEE--------SSCC---------------
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh---------cCeEEEEe--------cCCc---------------
Confidence 46999999999999999984 23332 222221 12345543 2110
Q ss_pred cCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecccHHHHHHHhCCccccCChhhHHHhhhh
Q 009735 240 HHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWKE 304 (527)
Q Consensus 240 pf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L~~~ 304 (527)
. +. ...++++++|++++++|+|+++.. ++-..+..-|+++....++|-+.
T Consensus 90 ---~--~~------~~~~~v~~~PT~~f~~~~G~~v~~----~~G~~~~~~~~~~~~~~~~ll~~ 139 (151)
T 3ph9_A 90 ---T--DK------NLSPDGQYVPRIMFVDPSLTVRAD----IAGRYSNRLYTYEPRDLPLLIEN 139 (151)
T ss_dssp ---S--CG------GGCTTCCCSSEEEEECTTSCBCTT----CCCSCTTSTTCCCGGGHHHHHHH
T ss_pred ---h--hh------HhhcCCCCCCEEEEECCCCCEEEE----EeCCcCCcccccchhhHHHHHHH
Confidence 0 00 124577999999999999999873 22234557788888877766544
No 167
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.08 E-value=0.0015 Score=53.43 Aligned_cols=67 Identities=10% Similarity=0.302 Sum_probs=47.6
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
+||.|+++|.+.||++|.. +.|.++.++. .++.++.|.+ |+.
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~--------~~v~~~~v~~--------~~~-------------------- 68 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKF--------PNVTFLKVDV--------DEL-------------------- 68 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHC--------SSEEEEEEET--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhC--------CCcEEEEEEc--------ccc--------------------
Confidence 5899999999999999983 3466655543 1466666643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 69 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (113)
T 1ti3_A 69 -------KAVAEEWNVEAMPTFIFL-KDGKLVD 93 (113)
T ss_dssp -------HHHHHHHHCSSTTEEEEE-ETTEEEE
T ss_pred -------HHHHHhCCCCcccEEEEE-eCCEEEE
Confidence 134566799999999998 6898864
No 168
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.08 E-value=0.0013 Score=57.31 Aligned_cols=69 Identities=10% Similarity=0.139 Sum_probs=51.1
Q ss_pred ccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 165 LRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
-++|.|+++|.+.||++|. .+.|.+++++.+ +++.++-|.+ |++
T Consensus 53 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-------~~~~~~~vd~--------~~~------------------- 98 (148)
T 3p2a_A 53 QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERA-------GKVRFVKVNT--------EAE------------------- 98 (148)
T ss_dssp TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC-------------------
T ss_pred hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcC-------CceEEEEEEC--------cCC-------------------
Confidence 4689999999999999998 456888777763 3466666643 211
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ .+|+.+.
T Consensus 99 --------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 123 (148)
T 3p2a_A 99 --------PALSTRFRIRSIPTIMLY-RNGKMID 123 (148)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHHCCCCccCEEEEE-ECCeEEE
Confidence 135677899999999999 5898764
No 169
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.06 E-value=0.0011 Score=55.83 Aligned_cols=69 Identities=16% Similarity=0.105 Sum_probs=47.9
Q ss_pred ccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 165 LRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
.+||.|+++|.+.||++|. .+.|.+++++.+ ++.++.|.+ |.+
T Consensus 35 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--------~~~~~~vd~--------~~~------------------- 79 (124)
T 1faa_A 35 AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--------DVIFLKLDC--------NQE------------------- 79 (124)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEEC--------SST-------------------
T ss_pred cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--------CCEEEEEec--------Ccc-------------------
Confidence 3689999999999999998 446777766542 355555533 110
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
. +.+.+.|++++.|++++. ++|+++.
T Consensus 80 ~-------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 105 (124)
T 1faa_A 80 N-------KTLAKELGIRVVPTFKIL-KENSVVG 105 (124)
T ss_dssp T-------HHHHHHHCCSSSSEEEEE-ETTEEEE
T ss_pred h-------HHHHHHcCCCeeeEEEEE-eCCcEEE
Confidence 1 235567899999996655 7898764
No 170
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.04 E-value=0.0022 Score=62.42 Aligned_cols=106 Identities=11% Similarity=0.137 Sum_probs=65.2
Q ss_pred CCCCceeecccccCcEEEEEEecCC-CChhH-HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhh
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVSDLD-VSNEE-LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfSal~-~~~~~-~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
..+|..|++++++||.|+|+|=..| ||+|. .-++.++ ..+.+. - .+++||-||. | +....++|-+-.
T Consensus 35 d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El-~~~~~~---~-~gv~VvgIS~-D-----s~~~~~~f~~~~ 103 (224)
T 3keb_A 35 DDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRET-RRFLDS---W-PHLKLIVITV-D-----SPSSLARARHEH 103 (224)
T ss_dssp ETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHH-HHHHTT---C-TTSEEEEEES-S-----CHHHHHHHHHHH
T ss_pred CCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHH-HHHHHH---c-CCCEEEEEEC-C-----CHHHHHHHHHHc
Confidence 3568899999999999999988777 77787 1111111 112111 1 4589999985 3 234556675543
Q ss_pred c--CCCceeecCCCCCCHHHHHHHHHhhCCCC---------CcEEEEeCCCCceeccc
Q 009735 232 Y--MMPWFSVHHPSAIDPAVIRYAKEKWDFRK---------KPILVVLDPQGRVVNQN 278 (527)
Q Consensus 232 ~--~MPWyAVpf~~~i~~~~~r~ike~~~~~~---------iP~LVvL~pqGkv~~~n 278 (527)
. ..|-++ |.. -..+.+.|++.. .|...|+|++|++....
T Consensus 104 gl~~fplLs-------D~~-~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~ 153 (224)
T 3keb_A 104 GLPNIALLS-------TLR-GRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSE 153 (224)
T ss_dssp CCTTCEEEE-------STT-CTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEE
T ss_pred CCCCceEEE-------cCC-chHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEE
Confidence 2 122222 211 023445566653 79999999999998543
No 171
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.01 E-value=0.0017 Score=53.59 Aligned_cols=67 Identities=9% Similarity=0.137 Sum_probs=48.0
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
+||.++++|.+.||++|.. +.|.++.++.+ ++.++-|.+ |+.
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~--------~~~-------------------- 70 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--------GAIFLKVDV--------DEL-------------------- 70 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTS--------------------
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--------CcEEEEEEc--------ccC--------------------
Confidence 4899999999999999983 45666655541 456665543 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 71 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 95 (118)
T 2vm1_A 71 -------KDVAEAYNVEAMPTFLFI-KDGEKVD 95 (118)
T ss_dssp -------HHHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcCcEEEEE-eCCeEEE
Confidence 235567899999999988 7898764
No 172
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.01 E-value=0.0022 Score=55.38 Aligned_cols=68 Identities=19% Similarity=0.231 Sum_probs=49.1
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
+++.|+|+|.+.||++|.. +.|.++.++.. +++.++.|.+ |.+
T Consensus 49 ~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--------~~~-------------------- 93 (140)
T 1v98_A 49 GAPLTLVDFFAPWCGPCRLVSPILEELARDHA-------GRLKVVKVNV--------DEH-------------------- 93 (140)
T ss_dssp CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--------TTC--------------------
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CceEEEEEEC--------CCC--------------------
Confidence 3444999999999999983 45777776652 2477777754 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 94 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 118 (140)
T 1v98_A 94 -------PGLAARYGVRSVPTLVLF-RRGAPVA 118 (140)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHCCCCccCEEEEE-eCCcEEE
Confidence 125677899999999999 7999764
No 173
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.00 E-value=0.0032 Score=53.41 Aligned_cols=72 Identities=13% Similarity=0.048 Sum_probs=50.6
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+++|.+.||++|. .+.+.++.++++.. ....++.++-|-+ |+.
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~--~~~~~v~~~~vd~--------~~~-------------------- 81 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQK--RNHLTFVAARIDG--------EKY-------------------- 81 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTS--TTTTTEEEEEEET--------TTC--------------------
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhc--ccCCCeEEEEEEc--------ccc--------------------
Confidence 389999999999999998 45688887776421 1234455554422 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCce
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRV 274 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv 274 (527)
+.+.+.|++++.|+++++++.|++
T Consensus 82 -------~~l~~~~~v~~~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 82 -------PDVIERMRVSGFPTMRYYTRIDKQ 105 (127)
T ss_dssp -------HHHHHHTTCCSSSEEEEECSSCSS
T ss_pred -------HhHHHhcCCccCCEEEEEeCCCCC
Confidence 235677899999999999887764
No 174
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.99 E-value=0.005 Score=68.26 Aligned_cols=148 Identities=11% Similarity=-0.017 Sum_probs=87.8
Q ss_pred cccccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceee
Q 009735 162 IDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSV 239 (527)
Q Consensus 162 Is~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAV 239 (527)
.+.++||.|++.|.|.||++|. .+.|.+++++++ +++.++.|.. |+..
T Consensus 450 ~~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~-------~~v~~~~vd~--------~~~~--------------- 499 (780)
T 3apo_A 450 FPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLY-------GQLKVGTLDC--------TIHE--------------- 499 (780)
T ss_dssp SCTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTCH---------------
T ss_pred HHHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCeEEEEEeC--------CCCH---------------
Confidence 3345899999999999999987 567888888774 3466666653 2211
Q ss_pred cCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecccHHHHHHHhCCccccCChhhHHHhhhhccc-ceeeccccCCC
Q 009735 240 HHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWKEETW-RIDLLADSVDP 318 (527)
Q Consensus 240 pf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L~~~e~w-~lelL~d~id~ 318 (527)
.+.+.|++++.|++++++ +|++.... | +++.+.+.+.-++-.- ....|.+ .
T Consensus 500 ------------~~~~~~~v~~~Pt~~~~~-~g~~~~~~--------g----~~~~~~l~~fi~~~~~~~v~~l~~---~ 551 (780)
T 3apo_A 500 ------------GLCNMYNIQAYPTTVVFN-QSSIHEYE--------G----HHSAEQILEFIEDLRNPSVVSLTP---S 551 (780)
T ss_dssp ------------HHHHHTTCCSSSEEEEEE-TTEEEEEC--------S----CSCHHHHHHHHHHHHSCSEEECCH---H
T ss_pred ------------HHHHHcCCCcCCeEEEEc-CCceeeec--------C----cccHHHHHHHHHhhcccceeecCc---c
Confidence 156778999999999994 57653221 2 2344433332222110 0111110 0
Q ss_pred CccccccC---ceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 009735 319 VIPTWIME---QKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKS 367 (527)
Q Consensus 319 ~I~~~i~e---gK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd 367 (527)
...+.+.. ++.++++|.+. ...|+++.+.+.++|+.....+-++.|..+
T Consensus 552 ~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~ 604 (780)
T 3apo_A 552 TFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCG 604 (780)
T ss_dssp HHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETT
T ss_pred cHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEEECc
Confidence 11122332 56667777772 133689999999998875445555665544
No 175
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.98 E-value=0.0015 Score=55.38 Aligned_cols=70 Identities=10% Similarity=0.150 Sum_probs=49.4
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|.. +.|.++.++.+. .++.++.|.+ |+.
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~------~~v~~~~vd~--------d~~-------------------- 77 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAG------DKVGFYKVDV--------DEQ-------------------- 77 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHH------HHSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcC------CcEEEEEEEC--------cCC--------------------
Confidence 5789999999999999983 346665554431 1377777754 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
..+.+.|++.+.|+++++ ++|+++..
T Consensus 78 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 103 (121)
T 2j23_A 78 -------SQIAQEVGIRAMPTFVFF-KNGQKIDT 103 (121)
T ss_dssp -------HHHHHHHTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-ECCeEEee
Confidence 235567899999999988 58988653
No 176
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=96.93 E-value=0.00048 Score=59.19 Aligned_cols=68 Identities=18% Similarity=0.215 Sum_probs=46.0
Q ss_pred cCcEEEEEEecCCCC--------------hhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHH
Q 009735 166 RRKSVLLLVSDLDVS--------------NEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 229 (527)
Q Consensus 166 ~gK~VlLyfSal~~~--------------~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~ 229 (527)
+||.|+++|.+.||+ +|. .+.|.+++++.+ +++.++-|.+ |++
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~-------~~~~~~~vd~--------d~~------ 78 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQ-------GKLTVAKLNI--------DQN------ 78 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------------CEEEEEET--------TSC------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhc-------CCeEEEEEEC--------CCC------
Confidence 489999999999999 887 455666555542 2466666653 211
Q ss_pred hhcCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 230 LQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 230 ~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 79 ---------------------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 103 (123)
T 1oaz_A 79 ---------------------PGTAPKYGIRGIPTLLLF-KNGEVAA 103 (123)
T ss_dssp ---------------------TTTGGGGTCCBSSEEEEE-ESSSEEE
T ss_pred ---------------------HHHHHHcCCCccCEEEEE-ECCEEEE
Confidence 124467899999999999 9999864
No 177
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.92 E-value=0.0015 Score=56.65 Aligned_cols=75 Identities=21% Similarity=0.220 Sum_probs=50.5
Q ss_pred ccCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 165 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
+++ .|+++|.+.||++|.. +.|.+++++. + +.++.|.+-+ +.+...
T Consensus 30 ~~~-~vlv~F~a~wC~~C~~~~p~l~~l~~~~-------~--v~~~~vd~~~------~~~~~~---------------- 77 (135)
T 3emx_A 30 LQG-DAILAVYSKTCPHCHRDWPQLIQASKEV-------D--VPIVMFIWGS------LIGERE---------------- 77 (135)
T ss_dssp HTS-SEEEEEEETTCHHHHHHHHHHHHHHTTC-------C--SCEEEEEECT------TCCHHH----------------
T ss_pred hCC-cEEEEEECCcCHhhhHhChhHHHHHHHC-------C--CEEEEEECCC------chhhhh----------------
Confidence 444 7999999999999984 4455554433 1 7777776522 112111
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
....+.+.+.|++++.|++++++ +|+++.
T Consensus 78 ----~d~~~~l~~~~~v~~~Pt~~~~~-~G~~v~ 106 (135)
T 3emx_A 78 ----LSAARLEMNKAGVEGTPTLVFYK-EGRIVD 106 (135)
T ss_dssp ----HHHHHHHHHHHTCCSSSEEEEEE-TTEEEE
T ss_pred ----hhhhHHHHHHcCCceeCeEEEEc-CCEEEE
Confidence 12235567789999999999999 998764
No 178
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=96.91 E-value=0.002 Score=61.14 Aligned_cols=70 Identities=4% Similarity=-0.088 Sum_probs=53.0
Q ss_pred CcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCC
Q 009735 167 RKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 244 (527)
Q Consensus 167 gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~ 244 (527)
+|.|+++|.|.||++|. .+.+.+++++++ ..+..+.++.|.+ |.++
T Consensus 30 ~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~----~~~~~v~~~~vd~--------~~~~-------------------- 77 (244)
T 3q6o_A 30 RSAWAVEFFASWCGHCIAFAPTWXALAEDVK----AWRPALYLAALDC--------AEET-------------------- 77 (244)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTG----GGTTTEEEEEEET--------TSTT--------------------
T ss_pred CCeEEEEEECCcCHHHHHHHHHHHHHHHHHH----hccCcEEEEEEeC--------Cchh--------------------
Confidence 59999999999999998 567999998885 2234688888865 1111
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEeCCCCc
Q 009735 245 IDPAVIRYAKEKWDFRKKPILVVLDPQGR 273 (527)
Q Consensus 245 i~~~~~r~ike~~~~~~iP~LVvL~pqGk 273 (527)
-+.+.+.|++++.|+++++++.++
T Consensus 78 -----~~~l~~~~~v~~~Pt~~~~~~g~~ 101 (244)
T 3q6o_A 78 -----NSAVCRDFNIPGFPTVRFFXAFTX 101 (244)
T ss_dssp -----THHHHHHTTCCSSSEEEEECTTCC
T ss_pred -----hHHHHHHcCCCccCEEEEEeCCCc
Confidence 134667889999999999997433
No 179
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.89 E-value=0.0014 Score=54.71 Aligned_cols=70 Identities=11% Similarity=0.163 Sum_probs=45.9
Q ss_pred cccCcEEEEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 164 VLRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 164 ~L~gK~VlLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
..+||.|+++|.+.||++|... ...++++.+ .- ++.++-|.+ |+.
T Consensus 30 ~~~~~~~vv~f~a~wC~~C~~~--~~~~~~~~~----~~-~~~~~~vd~--------~~~-------------------- 74 (117)
T 2xc2_A 30 QHKNKLVVVDFFATWCGPCKTI--APLFKELSE----KY-DAIFVKVDV--------DKL-------------------- 74 (117)
T ss_dssp HTTTSCEEEEEECTTCHHHHHH--HHHHHHHHT----TS-SSEEEEEET--------TTS--------------------
T ss_pred hCCCCEEEEEEECCCCHhHHHH--hHHHHHHHH----Hc-CcEEEEEEC--------Ccc--------------------
Confidence 3478999999999999999732 233444431 11 344444432 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 75 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 99 (117)
T 2xc2_A 75 -------EETARKYNISAMPTFIAI-KNGEKVG 99 (117)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCccceEEEE-eCCcEEE
Confidence 235567899999998887 7898764
No 180
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=96.89 E-value=0.0023 Score=59.58 Aligned_cols=68 Identities=9% Similarity=-0.005 Sum_probs=51.4
Q ss_pred ccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 165 LRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
.+||.|+++|.+.||++|. .+.|.+++++++ +++.++.|-+ |+.
T Consensus 112 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~-------~~v~~~~vd~--------~~~------------------- 157 (210)
T 3apq_A 112 NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVD-------GLLRIGAVNC--------GDD------------------- 157 (210)
T ss_dssp HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTB-------TTBEEEEEET--------TTC-------------------
T ss_pred ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhc-------CceEEEEEEC--------Ccc-------------------
Confidence 5799999999999999998 456888877763 2466666643 221
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
..+.+.|++++.|+++++ ++|+++
T Consensus 158 --------~~l~~~~~v~~~Pt~~~~-~~G~~~ 181 (210)
T 3apq_A 158 --------RMLCRMKGVNSYPSLFIF-RSGMAA 181 (210)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-CTTSCC
T ss_pred --------HHHHHHcCCCcCCeEEEE-ECCCce
Confidence 135567899999999999 899874
No 181
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=96.83 E-value=0.0035 Score=58.25 Aligned_cols=71 Identities=13% Similarity=0.128 Sum_probs=53.8
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+++|.+.||++|. .+.|.++.++++ ....++.++.|-+ |++
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~----~~~~~v~~~~vd~--------~~~-------------------- 193 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELS----KRSPPIPLAKVDA--------TAE-------------------- 193 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHH----TSSSCCCEEEEET--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHh----ccCCcEEEEEEEC--------CCC--------------------
Confidence 578999999999999998 567999998886 2345577777743 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++. +|+.+.
T Consensus 194 -------~~l~~~~~v~~~Pt~~~~~-~g~~~~ 218 (241)
T 3idv_A 194 -------TDLAKRFDVSGYPTLKIFR-KGRPYD 218 (241)
T ss_dssp -------HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred -------HHHHHHcCCcccCEEEEEE-CCeEEE
Confidence 1267788999999999997 477654
No 182
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.80 E-value=0.0014 Score=57.11 Aligned_cols=63 Identities=13% Similarity=0.092 Sum_probs=43.9
Q ss_pred CcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCC
Q 009735 167 RKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 244 (527)
Q Consensus 167 gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~ 244 (527)
||.|+++|.+.||++|.. +.|.++.++. .+ +.|+-+ |. |+. +
T Consensus 30 ~~~vvv~f~a~wC~~C~~~~p~l~~la~~~--------~~--v~~~~v-d~-----~~~------------------~-- 73 (135)
T 2dbc_A 30 DLWVVIHLYRSSVPMCLVVNQHLSVLARKF--------PE--TKFVKA-IV-----NSC------------------I-- 73 (135)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHC--------SS--EEEEEE-CC-----SSS------------------C--
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHC--------CC--cEEEEE-Eh-----hcC------------------c--
Confidence 589999999999999983 4566655543 12 555544 21 211 0
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 245 IDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 245 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
+.|++++.|+++++. +|+++.
T Consensus 74 ----------~~~~i~~~Pt~~~~~-~G~~v~ 94 (135)
T 2dbc_A 74 ----------EHYHDNCLPTIFVYK-NGQIEG 94 (135)
T ss_dssp ----------SSCCSSCCSEEEEES-SSSCSE
T ss_pred ----------ccCCCCCCCEEEEEE-CCEEEE
Confidence 367999999999997 898774
No 183
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.78 E-value=0.016 Score=53.63 Aligned_cols=152 Identities=9% Similarity=0.010 Sum_probs=81.8
Q ss_pred cccCcEEEEEEecC-CCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 164 VLRRKSVLLLVSDL-DVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 164 ~L~gK~VlLyfSal-~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
.++++.++++|++. ||++|. .+..+++++.+ ..+++.++.|-+ | +.
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~--~~~~~~~~la~----~~~~v~~~~vd~--------~--~~----------------- 65 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCD--QLKQLVQELSE----LTDKLSYEIVDF--------D--TP----------------- 65 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHH--HHHHHHHHHHT----TCTTEEEEEEET--------T--SH-----------------
T ss_pred hcCCCeEEEEEecCCCCchhH--HHHHHHHHHHh----hCCceEEEEEeC--------C--Cc-----------------
Confidence 35677888999999 999986 35666677652 234566666532 1 11
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee--cccHHHHHHHhCCccccCChhhHHHhhhhcccceeeccccCCCCc
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV--NQNALHMMWIWGSVAFPFSVAREEALWKEETWRIDLLADSVDPVI 320 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~--~~nA~~mI~~wG~~AfPFT~~r~e~L~~~e~w~lelL~d~id~~I 320 (527)
.-+-+.+.|++++.|+++++. +|+.. .-. |. | +.....++-..-. ...--...++...
T Consensus 66 ------~~~~~~~~~~v~~~Pt~~~~~-~g~~~~~~~~--------G~---~-~~~~l~~~l~~~l-~~~~~~~~l~~~~ 125 (226)
T 1a8l_A 66 ------EGKELAKRYRIDRAPATTITQ-DGKDFGVRYF--------GL---P-AGHEFAAFLEDIV-DVSREETNLMDET 125 (226)
T ss_dssp ------HHHHHHHHTTCCSSSEEEEEE-TTBCCSEEEE--------SC---C-CTTHHHHHHHHHH-HHHHTCCCCCHHH
T ss_pred ------ccHHHHHHcCCCcCceEEEEc-CCceeeEEEe--------cc---C-cHHHHHHHHHHHH-hhcCCCCCCCHHH
Confidence 013355678999999999993 44321 111 11 1 1111111110000 0000000111111
Q ss_pred -ccccc-CceEEEEEccCC-hhHHHHHHHHHHHHHHHhC----CceeEEEeccCC
Q 009735 321 -PTWIM-EQKHICLYGGED-LEWVRKFTALMGAVARAAG----IALEMLYVGKSN 368 (527)
Q Consensus 321 -~~~i~-egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~----~~~E~v~Vgkd~ 368 (527)
..... .++.++++|.+. -..|+++.+.+.++++... ..+.++.|.-+.
T Consensus 126 ~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~ 180 (226)
T 1a8l_A 126 KQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE 180 (226)
T ss_dssp HHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG
T ss_pred HHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc
Confidence 11122 455558888884 2556999999999987543 467777776653
No 184
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=96.70 E-value=0.002 Score=60.74 Aligned_cols=68 Identities=19% Similarity=0.261 Sum_probs=50.6
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+|+|.+.||++|. .+.|.+++++.+ +++.++.|.+ |.. +
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~--------d~~------------------~- 74 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQ-------GKLTVAKLNI--------DQN------------------P- 74 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC------------------T-
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhc-------CCcEEEEEEC--------CCC------------------H-
Confidence 478999999999999998 456888888774 2377777754 211 1
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+.+.|++++.|+++++. +|+++.
T Consensus 75 --------~l~~~~~v~~~Pt~~~~~-~G~~~~ 98 (222)
T 3dxb_A 75 --------GTAPKYGIRGIPTLLLFK-NGEVAA 98 (222)
T ss_dssp --------TTGGGGTCCSBSEEEEEE-TTEEEE
T ss_pred --------HHHHHcCCCcCCEEEEEE-CCeEEE
Confidence 134578999999999995 888764
No 185
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=96.68 E-value=0.0028 Score=53.98 Aligned_cols=76 Identities=8% Similarity=0.144 Sum_probs=50.6
Q ss_pred cCcEEEEEEecC-------CCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCc
Q 009735 166 RRKSVLLLVSDL-------DVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPW 236 (527)
Q Consensus 166 ~gK~VlLyfSal-------~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPW 236 (527)
+||.|+++|.+. ||++|. .+.|.+++++.. +++.++.|.+ +... . |
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~-------~~~~~~~vd~--------~~~~-~---------~ 77 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHIS-------EGCVFIYCQV--------GEKP-Y---------W 77 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCC-------TTEEEEEEEC--------CCHH-H---------H
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcC-------CCcEEEEEEC--------CCch-h---------h
Confidence 489999999999 999998 445766665442 3577777765 1111 1 2
Q ss_pred eeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 237 FSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 237 yAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
. +. . ..+.+.|+++++|+++++++.+++..
T Consensus 78 ~-----d~-~----~~~~~~~~i~~~Pt~~~~~~~~~~~g 107 (123)
T 1wou_A 78 K-----DP-N----NDFRKNLKVTAVPTLLKYGTPQKLVE 107 (123)
T ss_dssp H-----CT-T----CHHHHHHCCCSSSEEEETTSSCEEEG
T ss_pred h-----ch-h----HHHHHHCCCCeeCEEEEEcCCceEec
Confidence 1 10 1 22455689999999999998555553
No 186
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.66 E-value=0.0081 Score=55.60 Aligned_cols=71 Identities=7% Similarity=0.023 Sum_probs=49.9
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.++.++++|.+.||++|. .+.|.+++++.+. +..+++.++.|.+ |+.
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~---~~~~~v~~~~vd~--------~~~-------------------- 181 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTK---AGKGKILGDMVEA--------IEY-------------------- 181 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHH---TTCCCEEEEEEEG--------GGC--------------------
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhccc---ccCCcEEEEEEEc--------ccC--------------------
Confidence 355559999999999998 5678888887742 1234577766643 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
..+.+.|++++.|+++++ ++|+.+
T Consensus 182 -------~~l~~~~~v~~~Pt~~~~-~~G~~~ 205 (226)
T 1a8l_A 182 -------PEWADQYNVMAVPKIVIQ-VNGEDR 205 (226)
T ss_dssp -------HHHHHHTTCCSSCEEEEE-ETTEEE
T ss_pred -------HHHHHhCCCcccCeEEEE-eCCcee
Confidence 125567899999998887 588765
No 187
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=96.60 E-value=0.0079 Score=56.13 Aligned_cols=82 Identities=12% Similarity=0.082 Sum_probs=50.6
Q ss_pred cccccCcEEEEEEecCCCChhHHHH-----HHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCc
Q 009735 162 IDVLRRKSVLLLVSDLDVSNEELFL-----LEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPW 236 (527)
Q Consensus 162 Is~L~gK~VlLyfSal~~~~~~~~~-----L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPW 236 (527)
...-+||.|+|.|.|.||++|.... ..++-+.++ ++ +|+|.+ |. |+..+-=..|
T Consensus 34 ~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~-------~~--fv~ikV-D~-----de~~~l~~~y------ 92 (173)
T 3ira_A 34 KARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMN-------EA--FVSIKV-DR-----EERPDIDNIY------ 92 (173)
T ss_dssp HHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHH-------HH--CEEEEE-ET-----TTCHHHHHHH------
T ss_pred HHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHH-------hc--Cceeee-CC-----cccCcHHHHH------
Confidence 3346799999999999999998521 123333342 12 466654 32 2221111111
Q ss_pred eeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 237 FSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 237 yAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
..++...+++.++|++|+++|+|+++..
T Consensus 93 -------------~~~~q~~~gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 93 -------------MTVCQIILGRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp -------------HHHHHHHHSCCCSSEEEEECTTSCEEEE
T ss_pred -------------HHHHHHHcCCCCCcceeeECCCCCceee
Confidence 1122334799999999999999999864
No 188
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=96.49 E-value=0.017 Score=57.66 Aligned_cols=151 Identities=9% Similarity=0.122 Sum_probs=85.0
Q ss_pred CcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCC
Q 009735 167 RKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 244 (527)
Q Consensus 167 gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~ 244 (527)
.+.++++|.+.||++|+ .+.|.++.++++ +. |.|+-+ |.+...
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~-------~~--i~f~~v--------d~~~~~------------------ 179 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFK-------GK--ILFIFI--------DSDHTD------------------ 179 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGT-------TT--CEEEEE--------CTTSGG------------------
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHcc-------Cc--eEEEEe--------cCChHH------------------
Confidence 35778999999999887 445777766664 23 444433 222100
Q ss_pred CCHHHHHHHHHhhCCCC--CcEEEEeCCCCceecccHHHHHHHhCCccccCChhhHHHhhhhc----------------c
Q 009735 245 IDPAVIRYAKEKWDFRK--KPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWKEE----------------T 306 (527)
Q Consensus 245 i~~~~~r~ike~~~~~~--iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L~~~e----------------~ 306 (527)
-+.+.+.|++++ .|++++++..+... .|..++-++|.+.+.+.-++- .
T Consensus 180 -----~~~~~~~fgi~~~~~P~~~~~~~~~~~~---------ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~ 245 (361)
T 3uem_A 180 -----NQRILEFFGLKKEECPAVRLITLEEEMT---------KYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPED 245 (361)
T ss_dssp -----GHHHHHHTTCCTTTCSEEEEEECC--CC---------EECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTT
T ss_pred -----HHHHHHHcCCCccCCccEEEEEcCCccc---------ccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcc
Confidence 133456689987 99999998744221 122123355655555443331 1
Q ss_pred cceeeccccCC-CCccccc-cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCC--ceeEEEeccC
Q 009735 307 WRIDLLADSVD-PVIPTWI-MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGI--ALEMLYVGKS 367 (527)
Q Consensus 307 w~lelL~d~id-~~I~~~i-~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~--~~E~v~Vgkd 367 (527)
|.-..+. .++ ....+.+ ..+|.++++|.+.+ ..|+++.+.+.++++.... .+-++.|..+
T Consensus 246 ~~~~~v~-~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~ 310 (361)
T 3uem_A 246 WDKQPVK-VLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDST 310 (361)
T ss_dssp TTTSSSE-EECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETT
T ss_pred cccCCcE-EeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECC
Confidence 1100000 000 1111223 47999999999953 5569999999999886433 3555555444
No 189
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=96.47 E-value=0.003 Score=49.09 Aligned_cols=62 Identities=18% Similarity=0.263 Sum_probs=45.0
Q ss_pred cEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCCC
Q 009735 168 KSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAI 245 (527)
Q Consensus 168 K~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~i 245 (527)
+.++++|++.||++|. .+.|.++.++.. +++.++.|.+ |++ +
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--------~~~------------------~--- 46 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP-------DAVEVEYINV--------MEN------------------P--- 46 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS-------SSEEEEEEES--------SSS------------------C---
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC-------CceEEEEEEC--------CCC------------------H---
Confidence 4578999999999988 456777776652 4688888865 211 1
Q ss_pred CHHHHHHHHHhhCCCCCcEEEEeCCCCce
Q 009735 246 DPAVIRYAKEKWDFRKKPILVVLDPQGRV 274 (527)
Q Consensus 246 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv 274 (527)
.+.+.|++++.|++++ +|++
T Consensus 47 ------~~~~~~~v~~~Pt~~~---~G~~ 66 (85)
T 1fo5_A 47 ------QKAMEYGIMAVPTIVI---NGDV 66 (85)
T ss_dssp ------CTTTSTTTCCSSEEEE---TTEE
T ss_pred ------HHHHHCCCcccCEEEE---CCEE
Confidence 1235679999999999 8886
No 190
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=96.47 E-value=0.011 Score=49.14 Aligned_cols=69 Identities=9% Similarity=0.034 Sum_probs=48.7
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.+.||++|. .+.|.+++++++.. ....++.++.|-+ |+. |
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~--~~~~~v~~~~vd~--------~~~-----------~-------- 74 (121)
T 2djj_A 24 DTKDVLIEFYAPWCGHCKALAPKYEELGALYAKS--EFKDRVVIAKVDA--------TAN-----------D-------- 74 (121)
T ss_dssp TTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTS--SCTTSSEEEEEET--------TTS-----------C--------
T ss_pred CCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhc--ccCCceEEEEEEC--------ccc-----------c--------
Confidence 689999999999999998 45688888887521 0123566666643 210 0
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCce
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRV 274 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv 274 (527)
+ .+ ++++.|+++++++.|++
T Consensus 75 -~--------~~--~v~~~Pt~~~~~~~~~~ 94 (121)
T 2djj_A 75 -V--------PD--EIQGFPTIKLYPAGAKG 94 (121)
T ss_dssp -C--------SS--CCSSSSEEEEECSSCTT
T ss_pred -c--------cc--ccCcCCeEEEEeCcCCC
Confidence 1 11 88999999999998883
No 191
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=96.44 E-value=0.0086 Score=60.69 Aligned_cols=101 Identities=14% Similarity=0.093 Sum_probs=64.7
Q ss_pred CCCCceeecccccCcEEEEEEe-cCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhc
Q 009735 154 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 232 (527)
Q Consensus 154 g~~~~kV~Is~L~gK~VlLyfS-al~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~ 232 (527)
+.+|+.|++++++||.|+|+|= +.++|.|... +.+ |.+ ...++++||=||. | +....++|-+-+
T Consensus 11 ~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e-~~~-~~~------~~~~~~~v~gis~-D-----~~~~~~~f~~~~- 75 (322)
T 4eo3_A 11 TDEGKTFTHVDLYGKYTILFFFPKAGTSGSTRE-AVE-FSR------ENFEKAQVVGISR-D-----SVEALKRFKEKN- 75 (322)
T ss_dssp ETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHH-HHH-HHH------SCCTTEEEEEEES-C-----CHHHHHHHHHHH-
T ss_pred CCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHH-HHH-HHH------HhhCCCEEEEEeC-C-----CHHHHHHHHHhh-
Confidence 3577899999999999999994 2334445432 222 222 1335799999985 4 245566786543
Q ss_pred CCCceeecCCCCCCHHHHHHHHHhhCCC----CCcEEEEeCCCCceec
Q 009735 233 MMPWFSVHHPSAIDPAVIRYAKEKWDFR----KKPILVVLDPQGRVVN 276 (527)
Q Consensus 233 ~MPWyAVpf~~~i~~~~~r~ike~~~~~----~iP~LVvL~pqGkv~~ 276 (527)
.+|+--+ .|.. ..+.+.|++- .+|+..|+|++|++..
T Consensus 76 ~l~fp~l-----~D~~--~~v~~~ygv~~~~~~~r~tfiId~~G~i~~ 116 (322)
T 4eo3_A 76 DLKVTLL-----SDPE--GILHEFFNVLENGKTVRSTFLIDRWGFVRK 116 (322)
T ss_dssp TCCSEEE-----ECTT--CHHHHHTTCEETTEECCEEEEECTTSBEEE
T ss_pred CCceEEE-----EcCc--hHHHHhcCCCCCCcCccEEEEECCCCEEEE
Confidence 3443333 2332 3456677873 4788999999999963
No 192
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=96.44 E-value=0.0036 Score=48.60 Aligned_cols=60 Identities=10% Similarity=0.155 Sum_probs=44.3
Q ss_pred EEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCCCCH
Q 009735 170 VLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAIDP 247 (527)
Q Consensus 170 VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~i~~ 247 (527)
++++|++.||++|. .+.|.++.++.. ++++++.|.+ |++.
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--------~~~~----------------------- 45 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFG-------DKIDVEKIDI--------MVDR----------------------- 45 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHC-------SSCCEEEECT--------TTCG-----------------------
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhc-------CCeEEEEEEC--------CCCH-----------------------
Confidence 57899999999998 556887777763 3588888864 2111
Q ss_pred HHHHHHHHhhCCCCCcEEEEeCCCCce
Q 009735 248 AVIRYAKEKWDFRKKPILVVLDPQGRV 274 (527)
Q Consensus 248 ~~~r~ike~~~~~~iP~LVvL~pqGkv 274 (527)
.+.+.|++++.|++++ +|++
T Consensus 46 ----~~~~~~~v~~~Pt~~~---~G~~ 65 (85)
T 1nho_A 46 ----EKAIEYGLMAVPAIAI---NGVV 65 (85)
T ss_dssp ----GGGGGTCSSCSSEEEE---TTTE
T ss_pred ----HHHHhCCceeeCEEEE---CCEE
Confidence 2346789999999999 8886
No 193
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=96.26 E-value=0.0088 Score=64.56 Aligned_cols=71 Identities=4% Similarity=-0.012 Sum_probs=54.4
Q ss_pred CcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCC
Q 009735 167 RKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 244 (527)
Q Consensus 167 gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~ 244 (527)
+|.|+++|.|.||++|. .+.+.+++++++. .+..+.++-|-+ |.++
T Consensus 30 ~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~----~~~~v~~~~VD~--------d~d~-------------------- 77 (519)
T 3t58_A 30 SSAWAVEFFASWCGHAIAFAPTWKELANDVKD----WRPALNLAVLDC--------AEET-------------------- 77 (519)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGG----GTTTEEEEEEET--------TSGG--------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhC----cCCcEEEEEEEC--------Cccc--------------------
Confidence 59999999999999998 5679999999862 244688888754 2111
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEeCC---CCce
Q 009735 245 IDPAVIRYAKEKWDFRKKPILVVLDP---QGRV 274 (527)
Q Consensus 245 i~~~~~r~ike~~~~~~iP~LVvL~p---qGkv 274 (527)
-+.+.+.|++++.|+++++++ +|+.
T Consensus 78 -----~~~l~~~~~V~~~PTl~~f~~g~~~G~~ 105 (519)
T 3t58_A 78 -----NSAVCREFNIAGFPTVRFFQAFTKNGSG 105 (519)
T ss_dssp -----GHHHHHHTTCCSBSEEEEECTTCCSCCC
T ss_pred -----cHHHHHHcCCcccCEEEEEcCcccCCCc
Confidence 134667889999999999997 6663
No 194
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=95.18 E-value=0.00082 Score=53.81 Aligned_cols=68 Identities=19% Similarity=0.312 Sum_probs=45.9
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+++|.+.||++|.. +.|.++.++.. +++.++.|.+ |++
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 62 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYE-------GKVKVVKVNV--------DEN-------------------- 62 (106)
Confidence 4789999999999999983 45666665552 2344444432 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 63 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 87 (106)
T 2yj7_A 63 -------PNTAAQYGIRSIPTLLLF-KNGQVVD 87 (106)
Confidence 123456788999999999 8898753
No 195
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.06 E-value=0.0015 Score=54.85 Aligned_cols=67 Identities=9% Similarity=0.126 Sum_probs=48.0
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.++++|.+.||++|. .+.|.+++++.+ ++.++.|.+ |+.
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~v~~~~v~~--------~~~-------------------- 78 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--------GAVFLKVDV--------DEL-------------------- 78 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--------TBCCEECCT--------TTS--------------------
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--------CCEEEEEec--------cch--------------------
Confidence 589999999999999998 566777776651 355555532 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|++++.|+++++ ++|+++.
T Consensus 79 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 103 (130)
T 1wmj_A 79 -------KEVAEKYNVEAMPTFLFI-KDGAEAD 103 (130)
T ss_dssp -------GGGHHHHTCCSSCCCCBC-TTTTCCB
T ss_pred -------HHHHHHcCCCccceEEEE-eCCeEEE
Confidence 124467799999998887 8998764
No 196
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=95.85 E-value=0.012 Score=52.46 Aligned_cols=66 Identities=17% Similarity=0.338 Sum_probs=39.5
Q ss_pred CcEEEEEEecCC--CChhH--HHHHHHHHHHHhhhccCCCCCeE--EEEEeccCCCCCcchhhHHHHHHhhcCCCceeec
Q 009735 167 RKSVLLLVSDLD--VSNEE--LFLLEQMYRESRQLSSRTESQYE--VVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVH 240 (527)
Q Consensus 167 gK~VlLyfSal~--~~~~~--~~~L~~iY~~lk~~~~~~~~~fE--IVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVp 240 (527)
.+.++++|++.| |++|. .+.|.+++++. +++. ++-|-+ |+.
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~--------~~v~~~~~~Vd~--------d~~----------------- 80 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF--------PQFDWQVAVADL--------EQS----------------- 80 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC--------TTSCCEEEEECH--------HHH-----------------
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh--------cccceeEEEEEC--------CCC-----------------
Confidence 345788999887 88886 55676666543 2355 555532 221
Q ss_pred CCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 241 HPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 241 f~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.|+++++|+++++ .+|+++.
T Consensus 81 ----------~~la~~~~V~~iPT~~~f-k~G~~v~ 105 (142)
T 2es7_A 81 ----------EAIGDRFNVRRFPATLVF-TDGKLRG 105 (142)
T ss_dssp ----------HHHHHTTTCCSSSEEEEE-SCC----
T ss_pred ----------HHHHHhcCCCcCCeEEEE-eCCEEEE
Confidence 235678899999999999 8998763
No 197
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=95.65 E-value=0.013 Score=61.02 Aligned_cols=66 Identities=8% Similarity=0.050 Sum_probs=48.5
Q ss_pred CcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCC
Q 009735 167 RKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 244 (527)
Q Consensus 167 gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~ 244 (527)
||.|+++|.|.||++|. .+.|.+++++.+ ...++.++.|-. +.. .
T Consensus 370 ~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~-----~~~~v~~~~id~----------~~~-------~----------- 416 (481)
T 3f8u_A 370 NKDVLIEFYAPWCGHCKNLEPKYKELGEKLS-----KDPNIVIAKMDA----------TAN-------D----------- 416 (481)
T ss_dssp TCEEEEEEECTTBHHHHHHHHHHHHHHHHTT-----TCSSEEEEEEET----------TSS-------C-----------
T ss_pred CCcEEEEEecCcChhHHHhhHHHHHHHHHhc-----cCCCEEEEEEEC----------Cch-------h-----------
Confidence 89999999999999998 567888888874 223455555532 110 0
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEeCCCCc
Q 009735 245 IDPAVIRYAKEKWDFRKKPILVVLDPQGR 273 (527)
Q Consensus 245 i~~~~~r~ike~~~~~~iP~LVvL~pqGk 273 (527)
+.+.|++++.|+++++++.|+
T Consensus 417 --------~~~~~~v~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 417 --------VPSPYEVRGFPTIYFSPANKK 437 (481)
T ss_dssp --------CCTTCCCCSSSEEEEECTTCT
T ss_pred --------hHhhCCCcccCEEEEEeCCCe
Confidence 114578999999999998887
No 198
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=95.65 E-value=0.018 Score=57.33 Aligned_cols=74 Identities=11% Similarity=0.060 Sum_probs=51.5
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+++|.|.||++|. .+.|.+++++++ +.+.++.|-+ |.++
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~-------~~~~~~~v~~--------d~~~------------------- 79 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLD-------GVVQVAAVNC--------DLNK------------------- 79 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--------TSTT-------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CCcEEEEEEc--------cCcc-------------------
Confidence 368899999999999998 556888888774 2488888865 3111
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecccH
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNA 279 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA 279 (527)
-..+.+.|++++.|+++++++.+.+....+
T Consensus 80 ------~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g 109 (298)
T 3ed3_A 80 ------NKALCAKYDVNGFPTLMVFRPPKIDLSKPI 109 (298)
T ss_dssp ------THHHHHHTTCCBSSEEEEEECCCC------
T ss_pred ------CHHHHHhCCCCccceEEEEECCceeecccc
Confidence 134667889999999999987554444443
No 199
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=95.55 E-value=0.039 Score=50.32 Aligned_cols=72 Identities=11% Similarity=0.228 Sum_probs=46.6
Q ss_pred cCcEEEEEEecCCCChhHHHH-----HHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeec
Q 009735 166 RRKSVLLLVSDLDVSNEELFL-----LEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVH 240 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~~~-----L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVp 240 (527)
+||.|+|+|.+.||..|.... =.+|-+-+++ +| |+|-+ |. ++
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-------~f--v~v~~-d~----~~------------------- 87 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-------HF--IFWQV-YH----DS------------------- 87 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-------TE--EEEEE-ES----SS-------------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-------Ce--EEEEE-ec----CC-------------------
Confidence 389999999999999997431 1333344431 24 44433 21 11
Q ss_pred CCCCCCHHHHHHHHHhhCCCCCcEEEEeCCC-Cceecc
Q 009735 241 HPSAIDPAVIRYAKEKWDFRKKPILVVLDPQ-GRVVNQ 277 (527)
Q Consensus 241 f~~~i~~~~~r~ike~~~~~~iP~LVvL~pq-Gkv~~~ 277 (527)
.+. +.+.+.|++.+.|+++++||+ |+.+..
T Consensus 88 ------~~~-~~l~~~y~v~~~P~~~fld~~~G~~l~~ 118 (153)
T 2dlx_A 88 ------EEG-QRYIQFYKLGDFPYVSILDPRTGQKLVE 118 (153)
T ss_dssp ------HHH-HHHHHHHTCCSSSEEEEECTTTCCCCEE
T ss_pred ------HhH-HHHHHHcCCCCCCEEEEEeCCCCcEeee
Confidence 122 344578899999999999999 877643
No 200
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=95.37 E-value=0.23 Score=45.97 Aligned_cols=42 Identities=7% Similarity=-0.145 Sum_probs=29.5
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSN 368 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~ 368 (527)
.++.+.++|.+. -..|+++.+.+.++++.. ..+.++.|.-+.
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~~ 177 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDASE 177 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGGG
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECCC
Confidence 456657777773 355699999999998764 367777776554
No 201
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=95.34 E-value=0.046 Score=49.51 Aligned_cols=69 Identities=16% Similarity=0.182 Sum_probs=48.9
Q ss_pred cCc-EEEEEEecCCC--ChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeec
Q 009735 166 RRK-SVLLLVSDLDV--SNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVH 240 (527)
Q Consensus 166 ~gK-~VlLyfSal~~--~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVp 240 (527)
.++ .|++.|.|.|| +||. .++|.++=++. ++++.|+-|=+ |+.
T Consensus 31 ~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~-------~~~v~~~KVdv--------De~----------------- 78 (137)
T 2qsi_A 31 HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAF-------PGRLVAAEVAA--------EAE----------------- 78 (137)
T ss_dssp TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTS-------TTTEEEEEECG--------GGH-----------------
T ss_pred cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHc-------cCCcEEEEEEC--------CCC-----------------
Confidence 444 89999999999 9988 34555554433 35678877732 222
Q ss_pred CCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 241 HPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 241 f~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
+.+..+|+++++|+|+++ .+|+++..
T Consensus 79 ----------~~la~~ygV~siPTlilF-kdG~~v~~ 104 (137)
T 2qsi_A 79 ----------RGLMARFGVAVCPSLAVV-QPERTLGV 104 (137)
T ss_dssp ----------HHHHHHHTCCSSSEEEEE-ECCEEEEE
T ss_pred ----------HHHHHHcCCccCCEEEEE-ECCEEEEE
Confidence 345677899999999999 57877643
No 202
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=95.25 E-value=0.055 Score=51.99 Aligned_cols=71 Identities=10% Similarity=0.096 Sum_probs=48.1
Q ss_pred cccCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecC
Q 009735 164 VLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHH 241 (527)
Q Consensus 164 ~L~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf 241 (527)
.++|+.+++.|.+.||++|. .+.|.+++.+.+. +...++.+.-|-+ +. +
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~---~~~~~v~~~~vd~--------~~------------------~ 185 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWK---QGNPVILSEAVEA--------YE------------------N 185 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHH---TTCCCEEEEEEET--------TT------------------C
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHccc---ccCCcEEEEEEEC--------cc------------------C
Confidence 46789889999999999998 4567777766531 1123566555532 11 1
Q ss_pred CCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 242 PSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 242 ~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
.-+.+.|++++.|++++ +|+++
T Consensus 186 ---------~~~~~~~~V~~vPt~~i---~G~~~ 207 (243)
T 2hls_A 186 ---------PDIADKYGVMSVPSIAI---NGYLV 207 (243)
T ss_dssp ---------HHHHHHTTCCSSSEEEE---TTEEE
T ss_pred ---------HHHHHHcCCeeeCeEEE---CCEEE
Confidence 12456789999999998 78764
No 203
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=95.21 E-value=0.015 Score=57.04 Aligned_cols=90 Identities=14% Similarity=0.187 Sum_probs=55.3
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
++|.|+++|.|.||++|. .+.|.+++.+.. + |.|+-| |.+.. .
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--------~--v~f~kV--------d~d~~---~-------------- 176 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP--------M--VKFCKI--------KASNT---G-------------- 176 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--------T--SEEEEE--------EHHHH---C--------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--------C--CEEEEE--------eCCcH---H--------------
Confidence 489999999999999998 345766665541 2 445544 22221 0
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecccHHHHHHHhCCccccCChhhHHHhhhh
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWKE 304 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L~~~ 304 (527)
+.+.|++++.|+++++. +|+++.. -.+.....| + -|+.+.++.+-.+
T Consensus 177 ---------l~~~~~I~~~PTll~~~-~G~~v~~-~vG~~~~~g-~--~~~~e~Le~~L~~ 223 (245)
T 1a0r_P 177 ---------AGDRFSSDVLPTLLVYK-GGELLSN-FISVTEQLA-E--EFFTGDVESFLNE 223 (245)
T ss_dssp ---------CTTSSCTTTCSEEEEEE-TTEEEEE-ETTGGGGSC-T--TCCHHHHHHHHHT
T ss_pred ---------HHHHCCCCCCCEEEEEE-CCEEEEE-EeCCccccc-c--cccHHHHHHHHHH
Confidence 12357899999999886 8988742 122121112 1 2666666665544
No 204
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=95.19 E-value=0.087 Score=49.39 Aligned_cols=101 Identities=9% Similarity=-0.015 Sum_probs=65.2
Q ss_pred CCceeecccc-cCcEEEE-EEecCCCChh---HHHHHHHHHHHHhhhccCCCCCe-EEEEEeccCCCCCcchhhHHHHHH
Q 009735 156 TKRKVSIDVL-RRKSVLL-LVSDLDVSNE---ELFLLEQMYRESRQLSSRTESQY-EVVWLPIVDRSTPWTEAKEHKFEA 229 (527)
Q Consensus 156 ~~~kV~Is~L-~gK~VlL-yfSal~~~~~---~~~~L~~iY~~lk~~~~~~~~~f-EIVwIpiVd~s~~w~D~~~~~F~~ 229 (527)
.-+.|+++++ +||.|.| +|=+.|||.| |++.+.+.|+++++ .++ +||=||. | +-...++|.+
T Consensus 35 ~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~------~g~d~VigIS~-D-----~~~~~~~f~~ 102 (176)
T 4f82_A 35 GPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRA------AGIDEIWCVSV-N-----DAFVMGAWGR 102 (176)
T ss_dssp EEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHH------TTCCEEEEEES-S-----CHHHHHHHHH
T ss_pred CceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHh------CCCCEEEEEeC-C-----CHHHHHHHHH
Confidence 3468999996 9997654 6668888888 45679999999973 347 9999996 3 2344566754
Q ss_pred hhc-C--CCceeecCCCCCCHHHHHHHHHhhCCC-----------CCcEEEEeCCCCceeccc
Q 009735 230 LQY-M--MPWFSVHHPSAIDPAVIRYAKEKWDFR-----------KKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 230 ~~~-~--MPWyAVpf~~~i~~~~~r~ike~~~~~-----------~iP~LVvL~pqGkv~~~n 278 (527)
-.. . .|-++ -++ ..+.+.|++. ..|...|+ ++|+|....
T Consensus 103 ~~~l~~~f~lLs--D~~-------~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~ 155 (176)
T 4f82_A 103 DLHTAGKVRMMA--DGS-------AAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLA 155 (176)
T ss_dssp HTTCTTTSEEEE--CTT-------CHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEE
T ss_pred HhCCCCCceEEE--cCc-------hHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEE
Confidence 332 1 23222 121 2333444442 25778888 999997654
No 205
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=95.02 E-value=0.064 Score=49.84 Aligned_cols=63 Identities=6% Similarity=0.001 Sum_probs=42.9
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.++.++++|.+.||++|. .+.|.++.++. +++.++.|-+ |++
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~--------~~v~~~~vd~--------~~~-------------------- 178 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN--------DYITSKVIDA--------SEN-------------------- 178 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC--------TTEEEEEEEG--------GGC--------------------
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC--------CCeEEEEEEC--------CCC--------------------
Confidence 355668899999999997 34565555443 2566666643 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCce
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRV 274 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv 274 (527)
..+.+.|++++.|++++ +|++
T Consensus 179 -------~~l~~~~~v~~~Pt~~~---~G~~ 199 (229)
T 2ywm_A 179 -------QDLAEQFQVVGVPKIVI---NKGV 199 (229)
T ss_dssp -------HHHHHHTTCCSSSEEEE---GGGT
T ss_pred -------HHHHHHcCCcccCEEEE---CCEE
Confidence 12567789999999999 7774
No 206
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=95.01 E-value=0.076 Score=40.48 Aligned_cols=59 Identities=12% Similarity=-0.011 Sum_probs=40.4
Q ss_pred EEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCCCCHH
Q 009735 171 LLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAIDPA 248 (527)
Q Consensus 171 lLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~i~~~ 248 (527)
-+.|.+.||++|. .+.|.++.++.. .+++++-| | +
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~-------~~~~~~~v----------~---------------------~----- 39 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELG-------IDAEFEKI----------K---------------------E----- 39 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTT-------CCEEEEEE----------C---------------------S-----
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcC-------CceEEEEe----------c---------------------C-----
Confidence 3566777999998 345777776652 34665554 2 1
Q ss_pred HHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 249 VIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 249 ~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
..+.+.|++++.|++++ +|+++..
T Consensus 40 --~~~~~~~~v~~~Pt~~~---~G~~~~~ 63 (77)
T 1ilo_A 40 --MDQILEAGLTALPGLAV---DGELKIM 63 (77)
T ss_dssp --HHHHHHHTCSSSSCEEE---TTEEEEC
T ss_pred --HHHHHHCCCCcCCEEEE---CCEEEEc
Confidence 12345779999999999 8988754
No 207
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=94.86 E-value=0.032 Score=61.83 Aligned_cols=67 Identities=9% Similarity=-0.036 Sum_probs=51.0
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.||.|+++|.+.||++|. .+.|.+++++.+ +++.+++|-+ |+.
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~-------~~~~~~~vd~--------~~~-------------------- 718 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIK-------GKVRAGKVDC--------QAY-------------------- 718 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCceEEEEEC--------CCC--------------------
Confidence 478999999999999997 567888888874 2477777643 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
..+.+.|++++.|+++++ ++|+++
T Consensus 719 -------~~~~~~~~v~~~Pt~~~~-~~g~~~ 742 (780)
T 3apo_A 719 -------PQTCQKAGIKAYPSVKLY-QYERAK 742 (780)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-EEETTT
T ss_pred -------HHHHHhcCCCcCCEEEEE-cCCCcc
Confidence 124567899999999999 888765
No 208
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=94.67 E-value=0.048 Score=51.99 Aligned_cols=91 Identities=11% Similarity=0.139 Sum_probs=54.7
Q ss_pred cCcEEEEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCCC
Q 009735 166 RRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAI 245 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~i 245 (527)
+||.|+++|.+.||++|.. +..+++++.. .-.++.++-|.+ + . .
T Consensus 119 ~~k~vvV~F~a~wC~~C~~--l~p~l~~la~----~~~~v~f~~vd~----------~-~---~---------------- 162 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDA--LNSSLECLAA----EYPMVKFCKIRA----------S-N---T---------------- 162 (217)
T ss_dssp TTCEEEEEEECTTSTTHHH--HHHHHHHHHT----TCTTSEEEEEEH----------H-H---H----------------
T ss_pred CCcEEEEEEECCCCccHHH--HHHHHHHHHH----HCCCeEEEEEEC----------C-c---H----------------
Confidence 3589999999999999984 3344455532 112455555532 2 1 0
Q ss_pred CHHHHHHHHHhhCCCCCcEEEEeCCCCceecccHHHHHHHhCCccccCChhhHHHhhh
Q 009735 246 DPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWK 303 (527)
Q Consensus 246 ~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L~~ 303 (527)
.+.+.|++++.|+++++. +|+++.. -.+.....| --|+.+.++.+-.
T Consensus 163 ------~l~~~~~i~~~PTl~~~~-~G~~v~~-~~G~~~~~g---~~~~~~~Le~~L~ 209 (217)
T 2trc_P 163 ------GAGDRFSSDVLPTLLVYK-GGELISN-FISVAEQFA---EDFFAADVESFLN 209 (217)
T ss_dssp ------TCSTTSCGGGCSEEEEEE-TTEEEEE-ETTGGGGSC---SSCCHHHHHHHHH
T ss_pred ------HHHHHCCCCCCCEEEEEE-CCEEEEE-EeCCcccCc---ccCCHHHHHHHHH
Confidence 122457899999999995 8988742 222223333 2367666665543
No 209
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=94.65 E-value=0.15 Score=44.69 Aligned_cols=70 Identities=14% Similarity=0.216 Sum_probs=51.8
Q ss_pred CcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCC
Q 009735 167 RKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 244 (527)
Q Consensus 167 gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~ 244 (527)
+|.|+++|.|.||+||. .+.+.+..++ ++..++.|=+ |+
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~---------~~v~~~~vdV--------de---------------------- 64 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE---------RDMDGYYLIV--------QQ---------------------- 64 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH---------HTCCEEEEEG--------GG----------------------
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc---------CCceEEEEEe--------ec----------------------
Confidence 78999999999999998 3456665553 2466777632 21
Q ss_pred CCHHHHHHHHHhhCCCC-CcEEEEeCCCCceecc
Q 009735 245 IDPAVIRYAKEKWDFRK-KPILVVLDPQGRVVNQ 277 (527)
Q Consensus 245 i~~~~~r~ike~~~~~~-iP~LVvL~pqGkv~~~ 277 (527)
.+++-..|.++|++++ .|.++++ .+|+++-.
T Consensus 65 -~r~~Sn~IA~~~~V~h~sPq~il~-k~G~~v~~ 96 (112)
T 3iv4_A 65 -ERDLSDYIAKKTNVKHESPQAFYF-VNGEMVWN 96 (112)
T ss_dssp -GHHHHHHHHHHHTCCCCSSEEEEE-ETTEEEEE
T ss_pred -CchhhHHHHHHhCCccCCCeEEEE-ECCEEEEE
Confidence 2355678999999995 9999999 68887743
No 210
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=94.59 E-value=0.094 Score=47.62 Aligned_cols=70 Identities=11% Similarity=0.078 Sum_probs=47.1
Q ss_pred cCcEEEEEEecCC--CChhHHHHHHHHHHHHhhhccCCCCC-eEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 166 RRKSVLLLVSDLD--VSNEELFLLEQMYRESRQLSSRTESQ-YEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 166 ~gK~VlLyfSal~--~~~~~~~~L~~iY~~lk~~~~~~~~~-fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
.++.|+++|.|.| |+||. .+..+.+++.+ +-+++ +.|+-|= -|+
T Consensus 33 ~~~~vlVdF~a~~crCgpCk--~iaPvleela~---e~~g~~v~~~KVd----------vDe------------------ 79 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVS--DNPVMIGELLH---EFPDYTWQVAIAD----------LEQ------------------ 79 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTT--HHHHHHHHHHT---TCTTSCCEEEECC----------HHH------------------
T ss_pred CCCCEEEEEeCCcccCCcHH--HHHhHHHHHHH---HcCCCeEEEEEEE----------CCC------------------
Confidence 4567899999999 88886 23445555532 12344 6776662 222
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
-..+..+|+++++|+|+++ .+|+++.
T Consensus 80 -------~~~lA~~ygV~sIPTlilF-k~G~~v~ 105 (140)
T 2qgv_A 80 -------SEAIGDRFGAFRFPATLVF-TGGNYRG 105 (140)
T ss_dssp -------HHHHHHHHTCCSSSEEEEE-ETTEEEE
T ss_pred -------CHHHHHHcCCccCCEEEEE-ECCEEEE
Confidence 1346678899999999999 5787764
No 211
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=94.05 E-value=0.12 Score=42.73 Aligned_cols=69 Identities=13% Similarity=0.099 Sum_probs=41.4
Q ss_pred ccCcEEEEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCC
Q 009735 165 LRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 244 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~ 244 (527)
++++.|.+ |++.||++|... ..+.+++. ..|+++-|.. +.+.
T Consensus 17 ~~~~~vv~-f~a~~C~~C~~~--~~~l~~~~-------~~~~~v~v~~--------~~~~-------------------- 58 (116)
T 2e7p_A 17 ASSAPVVV-FSKTYCGYCNRV--KQLLTQVG-------ASYKVVELDE--------LSDG-------------------- 58 (116)
T ss_dssp HTSSSEEE-EECTTCHHHHHH--HHHHHHHT-------CCCEEEEGGG--------STTH--------------------
T ss_pred HcCCCEEE-EECCCChhHHHH--HHHHHHcC-------CCeEEEEccC--------CCCh--------------------
Confidence 45566666 999999999832 33444442 2365443311 1111
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 245 IDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 245 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
.+....+.+.|++++.|++ ++ +|+.+.
T Consensus 59 --~~~~~~l~~~~~v~~~Pt~-~~--~g~~v~ 85 (116)
T 2e7p_A 59 --SQLQSALAHWTGRGTVPNV-FI--GGKQIG 85 (116)
T ss_dssp --HHHHHHHHHHHSCCSSCEE-EE--TTEEEE
T ss_pred --HHHHHHHHHHhCCCCcCEE-EE--CCEEEC
Confidence 1234567788999999999 44 687764
No 212
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=93.93 E-value=0.052 Score=54.07 Aligned_cols=30 Identities=7% Similarity=0.036 Sum_probs=25.7
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHh
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESR 195 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk 195 (527)
.+|.|+++|.|.||++|. .+.|.++.++++
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~ 297 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYK 297 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhc
Confidence 589999999999999998 456888888774
No 213
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=93.89 E-value=0.077 Score=56.93 Aligned_cols=69 Identities=9% Similarity=-0.003 Sum_probs=47.9
Q ss_pred CcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCC----CCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeec
Q 009735 167 RKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTE----SQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVH 240 (527)
Q Consensus 167 gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~----~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVp 240 (527)
+|.|+++|.|.||++|. .+.+.+++++.+.. .+ +++.++=|-+ |+.
T Consensus 42 ~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~---~g~~~~~~v~f~~VD~--------d~~----------------- 93 (470)
T 3qcp_A 42 LCPWIVLFYNDGCGACRRYASTFSKFAGGLKVE---HGKDALQIATAAAVNC--------ASE----------------- 93 (470)
T ss_dssp GSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCS---SCSSGGGGCEEEEEET--------TTC-----------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhh---cccccCceEEEEEEEC--------CCC-----------------
Confidence 47899999999999998 45688888776421 11 1355544432 211
Q ss_pred CCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCc
Q 009735 241 HPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGR 273 (527)
Q Consensus 241 f~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGk 273 (527)
+.+.+.|++++.|+++++++.|.
T Consensus 94 ----------~~la~~y~V~~~PTlilf~~gg~ 116 (470)
T 3qcp_A 94 ----------VDLCRKYDINFVPRLFFFYPRDS 116 (470)
T ss_dssp ----------HHHHHHTTCCSSCEEEEEEESSC
T ss_pred ----------HHHHHHcCCCccCeEEEEECCCc
Confidence 23567789999999999987664
No 214
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=93.55 E-value=0.0045 Score=52.48 Aligned_cols=34 Identities=6% Similarity=-0.012 Sum_probs=25.4
Q ss_pred eeecccccCcEEEEEEecCCCChhHHHHHHHHHHHH
Q 009735 159 KVSIDVLRRKSVLLLVSDLDVSNEELFLLEQMYRES 194 (527)
Q Consensus 159 kV~Is~L~gK~VlLyfSal~~~~~~~~~L~~iY~~l 194 (527)
++.++...||.+++.|.|.||++|... ..+++++
T Consensus 4 ~~~la~~~~k~~vV~F~A~WC~~C~~~--~p~~~~~ 37 (106)
T 3kp8_A 4 AVGLAAHLRQIGGTMYGAYWCPHCQDQ--KELFGAA 37 (106)
T ss_dssp HHHHHHHHHHHTCEEEECTTCHHHHHH--HHHHGGG
T ss_pred hhHHHHhcCCCEEEEEECCCCHHHHHH--HHHHHHH
Confidence 455667788999999999999999843 3444554
No 215
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=93.14 E-value=0.15 Score=52.92 Aligned_cols=65 Identities=11% Similarity=0.046 Sum_probs=46.1
Q ss_pred CcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCC
Q 009735 167 RKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 244 (527)
Q Consensus 167 gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~ 244 (527)
++.|+++|.|.||++|. .+.+.++.++++ +. |.++.+ |.++
T Consensus 21 ~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~-------~~--v~~~~v--------d~~~-------------------- 63 (481)
T 3f8u_A 21 AGLMLVEFFAPWCGHAKRLAPEYEAAATRLK-------GI--VPLAKV--------DCTA-------------------- 63 (481)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TT--CCEEEE--------ETTT--------------------
T ss_pred CCeEEEEEECCCCHHHHHhHHHHHHHHHHhc-------Cc--eEEEEE--------ECCC--------------------
Confidence 38999999999999998 456888888774 12 444433 2221
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEeCCCCce
Q 009735 245 IDPAVIRYAKEKWDFRKKPILVVLDPQGRV 274 (527)
Q Consensus 245 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv 274 (527)
-+.+.++|++++.|+++++ .+|+.
T Consensus 64 -----~~~l~~~~~v~~~Ptl~~~-~~g~~ 87 (481)
T 3f8u_A 64 -----NTNTCNKYGVSGYPTLKIF-RDGEE 87 (481)
T ss_dssp -----CHHHHHHTTCCEESEEEEE-ETTEE
T ss_pred -----CHHHHHhcCCCCCCEEEEE-eCCce
Confidence 0235678899999999999 56753
No 216
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=93.01 E-value=0.027 Score=49.55 Aligned_cols=73 Identities=12% Similarity=0.095 Sum_probs=45.5
Q ss_pred ccCcEEEEEEecCCCChhHHHH--HHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCC
Q 009735 165 LRRKSVLLLVSDLDVSNEELFL--LEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 242 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~~~--L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~ 242 (527)
-+.+.++++|.|.||++|.... +.+.|.... ....+.++.|=+ |++. | +
T Consensus 16 ~~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a-----~~~~~~l~~vdv--------~~~~----------~------~ 66 (116)
T 3dml_A 16 DKAELRLLMFEQPGCLYCARWDAEIAPQYPLTD-----EGRAAPVQRLQM--------RDPL----------P------P 66 (116)
T ss_dssp ---CEEEEEEECTTCHHHHHHHHHTTTTGGGSH-----HHHHSCEEEEET--------TSCC----------C------T
T ss_pred ccCCCEEEEEECCCCHHHHHHHHHHHhhHHHhh-----hcccceEEEEEC--------CCCC----------c------h
Confidence 3557899999999999999543 333343321 122477888765 2110 0 1
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 243 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 243 ~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
+ +...+++.++|+||+++ +|+.+.
T Consensus 67 ~---------la~~~~V~g~PT~i~f~-~G~ev~ 90 (116)
T 3dml_A 67 G---------LELARPVTFTPTFVLMA-GDVESG 90 (116)
T ss_dssp T---------CBCSSCCCSSSEEEEEE-TTEEEE
T ss_pred h---------HHHHCCCCCCCEEEEEE-CCEEEe
Confidence 1 11345789999999999 998875
No 217
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=92.28 E-value=0.35 Score=50.64 Aligned_cols=66 Identities=8% Similarity=-0.073 Sum_probs=47.0
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.++.|+++|.|.||++|. .+.+.++.++++ +.++.++-|-. |++
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~------~~~v~~~~vd~--------~~~-------------------- 75 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLV------EKNITLAQIDC--------TEN-------------------- 75 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTT------TTTCEEEEEET--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhc------cCCeEEEEEEC--------CCC--------------------
Confidence 478999999999999998 456777777764 11355555432 111
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCc
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGR 273 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGk 273 (527)
+.+.++|++++.|+++++.. |+
T Consensus 76 -------~~l~~~~~v~~~Pt~~~~~~-g~ 97 (504)
T 2b5e_A 76 -------QDLCMEHNIPGFPSLKIFKN-SD 97 (504)
T ss_dssp -------HHHHHHTTCCSSSEEEEEET-TC
T ss_pred -------HHHHHhcCCCcCCEEEEEeC-Cc
Confidence 23667889999999999964 55
No 218
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=92.27 E-value=0.24 Score=50.32 Aligned_cols=74 Identities=14% Similarity=0.165 Sum_probs=50.1
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+|.|+++|.|.||++|. .+.+.++.++++... ...++ |+++-+ |.+ .
T Consensus 21 ~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~-~~~~~--v~~~~V--------d~~-------------------~ 70 (382)
T 2r2j_A 21 NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEF-PNENQ--VVFARV--------DCD-------------------Q 70 (382)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC----CC--EEEEEE--------ETT-------------------T
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhc-CCCCc--eEEEEE--------ECC-------------------c
Confidence 578999999999999998 456888888885210 00223 445543 222 0
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
+ +.+.++|++++.|+++++ .+|+++.
T Consensus 71 --~----~~l~~~~~v~~~Pt~~~f-~~G~~~~ 96 (382)
T 2r2j_A 71 --H----SDIAQRYRISKYPTLKLF-RNGMMMK 96 (382)
T ss_dssp --C----HHHHHHTTCCEESEEEEE-ETTEEEE
T ss_pred --c----HHHHHhcCCCcCCEEEEE-eCCcEee
Confidence 1 346678899999999987 5787653
No 219
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=91.73 E-value=0.56 Score=39.61 Aligned_cols=59 Identities=12% Similarity=0.140 Sum_probs=44.5
Q ss_pred CCCccccccCceEEEEEccCC-hhHHHHHHHHHHHHHHHhC--CceeEEEeccCCchhhhhhhh
Q 009735 317 DPVIPTWIMEQKHICLYGGED-LEWVRKFTALMGAVARAAG--IALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 317 d~~I~~~i~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~--~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
...+++. .||.+.|+|.+. -..|+.+.+.+.++++..+ ..++++.|+.|...+.+++.+
T Consensus 20 ~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~ 81 (144)
T 1o73_A 20 EVSLGSL--VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYY 81 (144)
T ss_dssp CBCSGGG--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHH
T ss_pred cCcHHHh--CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHH
Confidence 4444554 799999999885 2556899999999877543 689999999997766666544
No 220
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=91.52 E-value=0.83 Score=42.78 Aligned_cols=95 Identities=16% Similarity=0.144 Sum_probs=51.9
Q ss_pred ccCcEEEEEEecCCCChhHHH--HHHHHHHHHhhhccCCCCCeEEEEEe--ccCCCCCcc---------h-hhHHHHHHh
Q 009735 165 LRRKSVLLLVSDLDVSNEELF--LLEQMYRESRQLSSRTESQYEVVWLP--IVDRSTPWT---------E-AKEHKFEAL 230 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~~--~L~~iY~~lk~~~~~~~~~fEIVwIp--iVd~s~~w~---------D-~~~~~F~~~ 230 (527)
-.+|.+++.|++.|||+|... .|.++.+ . +..|+++. +... .+.+ . +..+.|.+.
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~--------~--~v~v~~~~~p~~~~-~~~s~~~a~a~~~a~d~~~~~~~~ 152 (216)
T 1eej_A 84 PQEKHVITVFTDITCGYCHKLHEQMADYNA--------L--GITVRYLAFPRQGL-DSDAEKEMKAIWCAKDKNKAFDDV 152 (216)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHTTHHHHHH--------T--TEEEEEEECCTTCS-SSHHHHHHHHHHTSSSHHHHHHHH
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHh--------C--CcEEEEEECCccCC-CchHHHHHHHHHhccCHHHHHHHH
Confidence 468899999999999999843 3555432 1 36677664 3110 0100 0 112334443
Q ss_pred hcCCCceeecCCC-CCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 231 QYMMPWFSVHHPS-AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 231 ~~~MPWyAVpf~~-~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
...-+ ++++. .........+.+.+++++.|++++. +|+.+
T Consensus 153 ~~~~~---~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~--dG~~~ 193 (216)
T 1eej_A 153 MAGKS---VAPASCDVDIADHYALGVQLGVSGTPAVVLS--NGTLV 193 (216)
T ss_dssp HTTCC---CCCCCCSCCHHHHHHHHHHHTCCSSSEEECT--TSCEE
T ss_pred HhCCC---CChhHHHHHHHHHHHHHHHcCCCccCEEEEc--CCeEe
Confidence 33322 22211 0123334556789999999999664 46543
No 221
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=90.99 E-value=0.48 Score=40.44 Aligned_cols=52 Identities=12% Similarity=0.079 Sum_probs=41.8
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhC--CceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAG--IALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~--~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|||.+. -..|+.+.+.+.++++..+ ..++++.|+.|...+.+++.+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~ 81 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYF 81 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHH
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHH
Confidence 799999999984 2556999999999977644 589999999997777766654
No 222
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=90.86 E-value=0.45 Score=40.46 Aligned_cols=52 Identities=6% Similarity=-0.139 Sum_probs=40.6
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|+|.+. -..|+...+.+.++++.. +..++++.|+.|...+.+++.+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~ 84 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETV 84 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHH
Confidence 799999999884 244588888888887753 3579999999997777766654
No 223
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=90.84 E-value=1.6 Score=41.74 Aligned_cols=100 Identities=7% Similarity=0.040 Sum_probs=53.0
Q ss_pred ccCcEEEEEEecCCCChhHHH--HHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcc---------hhhHHHHHH-hhc
Q 009735 165 LRRKSVLLLVSDLDVSNEELF--LLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWT---------EAKEHKFEA-LQY 232 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~~--~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~---------D~~~~~F~~-~~~ 232 (527)
-.+|.++..|++.|||.|.-. .|.+..+ . ++..|+|+++- ...+.+ ..++.+|-. +..
T Consensus 95 ~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~--------~-g~v~v~~~~~p-~~~~~s~~~a~a~~~a~d~~~~~~~~~~ 164 (241)
T 1v58_A 95 KDAPVIVYVFADPFCPYCKQFWQQARPWVD--------S-GKVQLRTLLVG-VIKPESPATAAAILASKDPAKTWQQYEA 164 (241)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHH--------T-TSEEEEEEECC-CSSTTHHHHHHHHHHSSSHHHHHHHHHH
T ss_pred CCCCeEEEEEECCCChhHHHHHHHHHHHHh--------C-CcEEEEEEECC-cCCCcHHHHHHHHHHccCHHHHHHHHHH
Confidence 357889999999999999843 3433221 1 35777877751 000111 112333322 221
Q ss_pred CCCceeecCCCCCCHHHH------HHHHHhhCCCCCcEEEEeCCCCce
Q 009735 233 MMPWFSVHHPSAIDPAVI------RYAKEKWDFRKKPILVVLDPQGRV 274 (527)
Q Consensus 233 ~MPWyAVpf~~~i~~~~~------r~ike~~~~~~iP~LVvL~pqGkv 274 (527)
.+.=-.+.-....+.+.. ..+.+.+++++.|++++.|.+|++
T Consensus 165 ~~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~ 212 (241)
T 1v58_A 165 SGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL 212 (241)
T ss_dssp TTTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE
T ss_pred HhccCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE
Confidence 110000000000112222 234478999999999999989975
No 224
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=90.67 E-value=0.36 Score=44.92 Aligned_cols=66 Identities=6% Similarity=0.020 Sum_probs=43.7
Q ss_pred CcEEEEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCC
Q 009735 167 RKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 244 (527)
Q Consensus 167 gK~VlLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~ 244 (527)
+|.|++-|+|.||+||.. |+|.++=++.. +...|+=|=+ |+.. +
T Consensus 41 ~k~VVVdF~A~WCgPCk~m~PvleelA~e~~-------~~v~f~kVDV--------De~~------------------e- 86 (160)
T 2av4_A 41 ERLVCIRFGHDYDPDCMKMDELLYKVADDIK-------NFCVIYLVDI--------TEVP------------------D- 86 (160)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHT-------TTEEEEEEET--------TTCC------------------T-
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHcc-------CCcEEEEEEC--------CCCH------------------H-
Confidence 678999999999999983 45666655542 2244444422 2111 1
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 245 IDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 245 i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
+.+.|+++.+|+++++- +|+.+
T Consensus 87 --------~a~~y~V~siPT~~fFk-~G~~v 108 (160)
T 2av4_A 87 --------FNTMYELYDPVSVMFFY-RNKHM 108 (160)
T ss_dssp --------TTTTTTCCSSEEEEEEE-TTEEE
T ss_pred --------HHHHcCCCCCCEEEEEE-CCEEE
Confidence 34677999999999884 66665
No 225
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=90.45 E-value=0.58 Score=41.57 Aligned_cols=58 Identities=10% Similarity=0.107 Sum_probs=45.1
Q ss_pred CccccccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhC--CceeEEEeccCCchhhhhhhhh
Q 009735 319 VIPTWIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAG--IALEMLYVGKSNPKEKARRIIS 378 (527)
Q Consensus 319 ~I~~~i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~--~~~E~v~Vgkd~~~e~v~~~~~ 378 (527)
.+++. .||.+.|||.+.+ ..|+++.+.+.++++..+ ..++++.|+.|...+.+++.++
T Consensus 42 ~l~~~--~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~ 102 (165)
T 3s9f_A 42 DMDSL--SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYA 102 (165)
T ss_dssp CSGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHT
T ss_pred cHHHc--CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHH
Confidence 44444 7999999998852 556999999999987643 4899999999988777776553
No 226
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=90.33 E-value=0.67 Score=39.32 Aligned_cols=52 Identities=15% Similarity=0.173 Sum_probs=41.7
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhC--CceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAG--IALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~--~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|||.+. -..|+.+.+.+.++++..+ ..++++.|+.|...+.+++.+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~ 81 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYY 81 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHH
Confidence 799999999984 2456999999999977644 589999999997777766654
No 227
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=90.31 E-value=0.63 Score=46.43 Aligned_cols=71 Identities=17% Similarity=0.192 Sum_probs=43.7
Q ss_pred cCcEEEEEEecCCCChhH--HHH---HHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeec
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFL---LEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVH 240 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~---L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVp 240 (527)
+++.|++.|.|.||+ |. .+. |..+|+++.+.- .+.+ |.++-+ |.++
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~--~~~~--v~~~~V--------d~~~---------------- 77 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVL--EHKD--IGFVMV--------DAKK---------------- 77 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHG--GGSS--EEEEEE--------ETTT----------------
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHH--hhcC--cEEEEE--------eCCC----------------
Confidence 468999999999998 64 333 344455443211 1113 455443 2221
Q ss_pred CCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 241 HPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 241 f~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
+ +.+.++|++++.|+++++ .+|++.
T Consensus 78 -----~----~~l~~~~~v~~~Pt~~~~-~~g~~~ 102 (350)
T 1sji_A 78 -----E----AKLAKKLGFDEEGSLYVL-KGDRTI 102 (350)
T ss_dssp -----T----HHHHHHHTCCSTTEEEEE-ETTEEE
T ss_pred -----C----HHHHHhcCCCccceEEEE-ECCcEE
Confidence 0 236678899999999999 678754
No 228
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=89.63 E-value=0.059 Score=45.33 Aligned_cols=19 Identities=16% Similarity=0.003 Sum_probs=16.8
Q ss_pred CCccccCChhhHHHhhhhc
Q 009735 287 GSVAFPFSVAREEALWKEE 305 (527)
Q Consensus 287 G~~AfPFT~~r~e~L~~~e 305 (527)
|+.|||||.+|+++|.++-
T Consensus 1 ~~~a~pfte~~~~~~~~~l 19 (89)
T 1v5n_A 1 GSSGSSGTEERLKEIEAKY 19 (89)
T ss_dssp CCCCCCCCSSCCSHHHHHH
T ss_pred CCcccccCHHHHHHHHHHH
Confidence 8899999999999997653
No 229
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=89.43 E-value=0.23 Score=42.96 Aligned_cols=87 Identities=9% Similarity=0.069 Sum_probs=52.8
Q ss_pred CcEEEEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCCCC
Q 009735 167 RKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAID 246 (527)
Q Consensus 167 gK~VlLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~i~ 246 (527)
++.|+++|.|.||+||.. +..++++|-+. -.+ +.|+-+ |.++.
T Consensus 23 ~~~vvv~F~a~wc~~C~~--~~p~l~~la~~----~~~--v~f~kv--------d~d~~--------------------- 65 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLL--VNQHLSLLARK----FPE--TKFVKA--------IVNSC--------------------- 65 (118)
T ss_dssp TCEEEEEEECTTSHHHHH--HHHHHHHHHHH----CTT--SEEEEE--------EGGGT---------------------
T ss_pred CCeEEEEEeCCCChHHHH--HHHHHHHHHHH----CCC--CEEEEE--------EhHHh---------------------
Confidence 358999999999999984 33444555321 123 444443 33320
Q ss_pred HHHHHHHHHhhCCCCCcEEEEeCCCCceecc-cHHHHHHHhCCccccCChhhHHHhhh
Q 009735 247 PAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ-NALHMMWIWGSVAFPFSVAREEALWK 303 (527)
Q Consensus 247 ~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~-nA~~mI~~wG~~AfPFT~~r~e~L~~ 303 (527)
.+.|+++++|+++++- +|+.+.. .|.. ..|-+ -||.+.+|..-+
T Consensus 66 -------~~~~~v~~~PT~~~fk-~G~~v~~~~G~~---~~gg~--~~~~~~le~~L~ 110 (118)
T 3evi_A 66 -------IQHYHDNCLPTIFVYK-NGQIEAKFIGII---ECGGI--NLKLEELEWKLA 110 (118)
T ss_dssp -------STTCCGGGCSEEEEEE-TTEEEEEEESTT---TTTCS--SCCHHHHHHHHH
T ss_pred -------HHHCCCCCCCEEEEEE-CCEEEEEEeChh---hhCCC--CCCHHHHHHHHH
Confidence 0356889999999995 7877643 2221 22322 588887776654
No 230
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=89.03 E-value=2.4 Score=39.51 Aligned_cols=95 Identities=16% Similarity=0.215 Sum_probs=50.9
Q ss_pred cCcEEEEEEecCCCChhHHH--HHHHHHHHHhhhccCCCCCeEEEEE--eccC-CCC-------Ccc-hhhHHHHHHhhc
Q 009735 166 RRKSVLLLVSDLDVSNEELF--LLEQMYRESRQLSSRTESQYEVVWL--PIVD-RST-------PWT-EAKEHKFEALQY 232 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~~--~L~~iY~~lk~~~~~~~~~fEIVwI--piVd-~s~-------~w~-D~~~~~F~~~~~ 232 (527)
.+|.++..|++.|||.|... .|.+ |.+ . +..|+|+ |+.. ++. -|. ....+.|.+.++
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~-~~~-------~--~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~ 154 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKE-YND-------L--GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEK 154 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHH-HHH-------T--TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHT
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHH-HHh-------C--CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHc
Confidence 47889999999999999844 3544 222 1 3666665 5411 000 000 011233444443
Q ss_pred CCCceeecCCC-CCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 233 MMPWFSVHHPS-AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 233 ~MPWyAVpf~~-~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
.-+ ++... .........+.+.++++|.|++++ .+|+.+
T Consensus 155 ~~~---~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi--~nG~~~ 193 (211)
T 1t3b_A 155 GNL---PKEVKTPNIVKKHYELGIQFGVRGTPSIVT--STGELI 193 (211)
T ss_dssp TCC---CSSCCCSSHHHHHHHHHHHHTCCSSCEEEC--TTSCCC
T ss_pred CCC---CChHHHHHHHHHHHHHHHHcCCCcCCEEEE--eCCEEe
Confidence 321 12211 001122344568999999999998 568643
No 231
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=88.43 E-value=1.2 Score=39.39 Aligned_cols=31 Identities=3% Similarity=-0.078 Sum_probs=24.0
Q ss_pred ccccCcEEEEEEecCCCChhHHH--HHHHHHHH
Q 009735 163 DVLRRKSVLLLVSDLDVSNEELF--LLEQMYRE 193 (527)
Q Consensus 163 s~L~gK~VlLyfSal~~~~~~~~--~L~~iY~~ 193 (527)
..-.+|.++..|++.|||.|... .|.+++++
T Consensus 18 G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~ 50 (175)
T 3gyk_A 18 GNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDA 50 (175)
T ss_dssp ECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEEECCCCccHHHHHHHHHHHHHh
Confidence 34568899999999999999843 57666655
No 232
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=88.06 E-value=0.54 Score=47.65 Aligned_cols=72 Identities=11% Similarity=0.176 Sum_probs=46.3
Q ss_pred cCcEEEEEEecCCCChhHH-HHHH---HHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecC
Q 009735 166 RRKSVLLLVSDLDVSNEEL-FLLE---QMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHH 241 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~-~~L~---~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf 241 (527)
.++.|++.|.|.||++|.. +.|. .+|+++...- .+. .|.+.-+ |.++.
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~--~~~--~v~~~~V--------d~~~~---------------- 80 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVL--EDK--GVGFGLV--------DSEKD---------------- 80 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHH--TTT--TEEEEEE--------ETTTT----------------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHh--hcC--CceEEEE--------eCccc----------------
Confidence 4689999999999998764 3333 4566654221 122 3555543 22211
Q ss_pred CCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 242 PSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 242 ~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
+-|.++|++++.|+++++. +|+.+
T Consensus 81 ---------~~l~~~~~V~~~PTl~~f~-~G~~~ 104 (367)
T 3us3_A 81 ---------AAVAKKLGLTEEDSIYVFK-EDEVI 104 (367)
T ss_dssp ---------HHHHHHHTCCSTTEEEEEE-TTEEE
T ss_pred ---------HHHHHHcCCCcCceEEEEE-CCcEE
Confidence 2367788999999999997 57764
No 233
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=88.01 E-value=0.3 Score=51.10 Aligned_cols=30 Identities=13% Similarity=0.030 Sum_probs=25.0
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHh
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESR 195 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk 195 (527)
.+|.|+++|.|.||++|. .+.+.++.++.+
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~ 406 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYA 406 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhh
Confidence 489999999999999998 456777777764
No 234
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=87.50 E-value=0.3 Score=46.11 Aligned_cols=48 Identities=13% Similarity=-0.013 Sum_probs=37.2
Q ss_pred HHHhhcCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceeccc
Q 009735 227 FEALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 227 F~~~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 278 (527)
+-.-+..+||.+|++-. + ..+.+.++|++++.|+||+++++|++...|
T Consensus 175 ~~~d~~~~~~i~v~~~~--~--~~~~l~~~f~v~~~Pslvl~~~~g~~~~~~ 222 (244)
T 3q6o_A 175 VALDLSQHKGVAVRRVL--N--TEANVVRKFGVTDFPSCYLLFRNGSVSRVP 222 (244)
T ss_dssp HHHHTTTCTTEEEEEEE--T--TCHHHHHHHTCCCSSEEEEEETTSCEEECC
T ss_pred HHHHhccCCceEEEEEe--C--chHHHHHHcCCCCCCeEEEEeCCCCeEeec
Confidence 33345677889998854 2 125677788999999999999999999887
No 235
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=87.28 E-value=0.41 Score=37.41 Aligned_cols=18 Identities=33% Similarity=0.536 Sum_probs=14.7
Q ss_pred HhhCCCCCcEEEEeCCCCcee
Q 009735 255 EKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 255 e~~~~~~iP~LVvL~pqGkv~ 275 (527)
+.+++++.|++++ +|+++
T Consensus 49 ~~~gv~~vPt~~i---~g~~~ 66 (80)
T 2k8s_A 49 EKAGVKSVPALVI---DGAAF 66 (80)
T ss_dssp HHHTCCEEEEEEE---TTEEE
T ss_pred HHcCCCcCCEEEE---CCEEE
Confidence 5679999999988 78754
No 236
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=87.10 E-value=1.2 Score=37.28 Aligned_cols=50 Identities=14% Similarity=0.137 Sum_probs=40.6
Q ss_pred CceEEEEEccCChhHH---HHHHHHHHHHHHHh--CCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGGEDLEWV---RKFTALMGAVARAA--GIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d~~Wi---~~FT~~~~~i~~~~--~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|+|.+ .|| +...+.+.++++.. +..++++.|+.|...+.+++..
T Consensus 32 ~gk~vll~F~~--~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~ 86 (148)
T 3fkf_A 32 RNRYLLLNFWA--SWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAI 86 (148)
T ss_dssp TTSEEEEEEEC--GGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHH
T ss_pred CCcEEEEEEEC--CCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHH
Confidence 79999999988 565 89999999998764 3459999999998777766654
No 237
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=86.29 E-value=2.8 Score=34.25 Aligned_cols=32 Identities=31% Similarity=0.650 Sum_probs=21.8
Q ss_pred HHhhCCCCCcEEEEeCCCCceecccHHHHHHHhCCccccCChhhHHHhh
Q 009735 254 KEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALW 302 (527)
Q Consensus 254 ke~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AfPFT~~r~e~L~ 302 (527)
.++|+++ +|++++ .+|+.+. .+|++++++++-
T Consensus 41 ~~~~g~~-vPtl~~--~~G~~v~--------------g~~~~~~L~~~l 72 (87)
T 1ttz_A 41 ESAYGLR-VPVLRD--PMGRELD--------------WPFDAPRLRAWL 72 (87)
T ss_dssp HHHHTTT-CSEEEC--TTCCEEE--------------SCCCHHHHHHHH
T ss_pred HHHhCCC-cCeEEE--ECCEEEe--------------CCCCHHHHHHHH
Confidence 3456777 999987 6798873 357777666554
No 238
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=86.23 E-value=0.88 Score=38.13 Aligned_cols=51 Identities=10% Similarity=-0.009 Sum_probs=39.8
Q ss_pred CceEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhhh
Q 009735 326 EQKHICLYGGEDLEWV---RKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRIIS 378 (527)
Q Consensus 326 egK~I~LYgg~d~~Wi---~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~~ 378 (527)
.||.+.|+|.+ .|| +...+.+.++++.. +..++++.|+.|...+.+++.++
T Consensus 30 ~gk~vll~f~~--~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~ 84 (148)
T 3hcz_A 30 QAKYTILFFWD--SQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIR 84 (148)
T ss_dssp CCSEEEEEEEC--GGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHH
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHH
Confidence 89999999988 565 88888888887653 33599999999977676666553
No 239
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=86.21 E-value=1.1 Score=38.55 Aligned_cols=52 Identities=17% Similarity=0.113 Sum_probs=40.1
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|+|.+. -..|+...+.+.++++.. +..++++.|+.|...+.+++.+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~ 81 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAI 81 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHH
Confidence 799999999884 245699999999987754 4469999999997666665544
No 240
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=85.34 E-value=2.1 Score=33.83 Aligned_cols=47 Identities=6% Similarity=-0.077 Sum_probs=38.4
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchhh
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKEK 372 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e~ 372 (527)
.+|.+.++|.+++ .+|+.+.+.+.++++..+..+.++.|.-++..+-
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 65 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPST 65 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHH
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHH
Confidence 8899999998863 7779999999999887666688899888765443
No 241
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=85.30 E-value=1.5 Score=34.74 Aligned_cols=50 Identities=8% Similarity=-0.047 Sum_probs=39.7
Q ss_pred ccccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 009735 322 TWIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 371 (527)
Q Consensus 322 ~~i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e 371 (527)
+.+..||.+.+||.+++ .+|+.+.+.+.++++..+..+.++.|..+...+
T Consensus 16 ~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 66 (109)
T 3tco_A 16 EVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQK 66 (109)
T ss_dssp HHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHH
T ss_pred HHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHH
Confidence 33568999999998863 777999999999988766678888888775543
No 242
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=85.12 E-value=0.79 Score=38.54 Aligned_cols=25 Identities=8% Similarity=0.081 Sum_probs=19.4
Q ss_pred HHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 248 AVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 248 ~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
+....+.+.++++++|.+++ +|+.+
T Consensus 62 ~~~~~l~~~~g~~~vP~v~i---~g~~i 86 (114)
T 2hze_A 62 ELRDYFEQITGGKTVPRIFF---GKTSI 86 (114)
T ss_dssp HHHHHHHHHHSCCSSCEEEE---TTEEE
T ss_pred HHHHHHHHHhCCCCcCEEEE---CCEEE
Confidence 45567888889999998865 67776
No 243
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=84.62 E-value=1.9 Score=36.48 Aligned_cols=52 Identities=10% Similarity=0.005 Sum_probs=39.8
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|||.+. -..|+.+.+.+.++++.. +..++++.|+.+...+.+++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~ 80 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFL 80 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHH
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHH
Confidence 799999999774 355799999999987753 3359999999987666655544
No 244
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=84.19 E-value=1.5 Score=41.01 Aligned_cols=72 Identities=13% Similarity=0.097 Sum_probs=44.1
Q ss_pred cCcEEEEEEec-------CCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCc
Q 009735 166 RRKSVLLLVSD-------LDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPW 236 (527)
Q Consensus 166 ~gK~VlLyfSa-------l~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPW 236 (527)
++..|+++|.| .||.||.. +.+.++=++..... .++ .|+|.-+ | .|+.
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~--~~~--~v~f~kv-D-----~d~~------------- 92 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQA--PQS--LNLFFTV-D-----VNEV------------- 92 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHC--TTC--CEEEEEE-E-----TTTC-------------
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhcc--CCC--CEEEEEE-E-----CccC-------------
Confidence 35679999999 49999983 34555544443111 112 3455533 3 1222
Q ss_pred eeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCce
Q 009735 237 FSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRV 274 (527)
Q Consensus 237 yAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv 274 (527)
+-+.+.|+++++|+|+++-+.|+.
T Consensus 93 --------------~~la~~~~I~siPtl~~F~~g~~~ 116 (178)
T 3ga4_A 93 --------------PQLVKDLKLQNVPHLVVYPPAESN 116 (178)
T ss_dssp --------------HHHHHHTTCCSSCEEEEECCCCGG
T ss_pred --------------HHHHHHcCCCCCCEEEEEcCCCCC
Confidence 334566799999999999876643
No 245
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=83.82 E-value=1.9 Score=34.06 Aligned_cols=47 Identities=6% Similarity=-0.017 Sum_probs=37.4
Q ss_pred ccCceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 324 IMEQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 324 i~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
++.||.+.+||.++ -.+|+.+.+.+.++++..+..+.++.|.-+...
T Consensus 15 ~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~ 62 (109)
T 2yzu_A 15 LGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENP 62 (109)
T ss_dssp HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCH
T ss_pred hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCH
Confidence 45789999999885 367799999999998876657888888877543
No 246
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=83.74 E-value=2.1 Score=33.90 Aligned_cols=47 Identities=9% Similarity=-0.024 Sum_probs=37.0
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
++.||.+.++|.+++ .+|+++.+.+.++++..+..+.++.|.-+...
T Consensus 14 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~ 61 (105)
T 1nsw_A 14 IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP 61 (105)
T ss_dssp HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCH
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCH
Confidence 457899999998853 77799999999998876556888888777543
No 247
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=83.69 E-value=13 Score=35.29 Aligned_cols=42 Identities=12% Similarity=-0.148 Sum_probs=27.3
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh---C-CceeEEEeccC
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA---G-IALEMLYVGKS 367 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~---~-~~~E~v~Vgkd 367 (527)
.|+...+.|.+. -..|++..+.+.+++... + ..+.+..|.-+
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~ 183 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAY 183 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETT
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECc
Confidence 577777766663 355699999998887653 1 34555555444
No 248
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=83.67 E-value=3.1 Score=35.13 Aligned_cols=53 Identities=9% Similarity=0.041 Sum_probs=42.1
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHH---HHHH-hCCceeEEEeccCCchhhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGA---VARA-AGIALEMLYVGKSNPKEKARRIIS 378 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~---i~~~-~~~~~E~v~Vgkd~~~e~v~~~~~ 378 (527)
.||.+.|+|-+. -..|+...+.+.+ +++. .+..++++.|+.|+..+.+++.++
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~ 87 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRN 87 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGG
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHH
Confidence 689999999874 3556888898988 7664 367899999999988877776554
No 249
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=83.24 E-value=3.1 Score=32.87 Aligned_cols=45 Identities=4% Similarity=-0.032 Sum_probs=36.2
Q ss_pred cCceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 325 MEQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 325 ~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
..||.+.++|.++ -.+|+++.+.+.++++..+..+.++.|.-++.
T Consensus 18 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 63 (107)
T 2i4a_A 18 KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDN 63 (107)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTC
T ss_pred hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCC
Confidence 5789999999885 37779999999999876555788888877754
No 250
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=83.24 E-value=2.2 Score=36.43 Aligned_cols=52 Identities=12% Similarity=0.057 Sum_probs=42.0
Q ss_pred CceEEEEEccCC-hhH--HHHHHHHHHHHHHHh--CCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGGED-LEW--VRKFTALMGAVARAA--GIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d-~~W--i~~FT~~~~~i~~~~--~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|+|.+. -.. |+...+.+.++++.. +..++++.|+.|..++.+++.+
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~ 88 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAI 88 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHH
Confidence 799999999885 356 888999999997763 4569999999998777776655
No 251
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=82.85 E-value=2.3 Score=34.78 Aligned_cols=52 Identities=12% Similarity=0.058 Sum_probs=40.6
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARRIIS 378 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e~v~~~~~ 378 (527)
.||.+.|+|.+. -..|+.+.+.+.++++..+ .++++.|+.+...+.+++..+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~ 76 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVN 76 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHH
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHH
Confidence 789899988874 3556999999999987656 899999998876666666543
No 252
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=82.79 E-value=8 Score=35.62 Aligned_cols=62 Identities=10% Similarity=0.147 Sum_probs=44.1
Q ss_pred ceeeccc-ccCcEEEEEEecC-CCChhH--HHHHHHHHHHHhhhccCCCCCeE-EEEEeccCCCCCcchhhHHHHHHhh
Q 009735 158 RKVSIDV-LRRKSVLLLVSDL-DVSNEE--LFLLEQMYRESRQLSSRTESQYE-VVWLPIVDRSTPWTEAKEHKFEALQ 231 (527)
Q Consensus 158 ~kV~Is~-L~gK~VlLyfSal-~~~~~~--~~~L~~iY~~lk~~~~~~~~~fE-IVwIpiVd~s~~w~D~~~~~F~~~~ 231 (527)
+.|++++ ++||.|.|||=-. |+|.|- +..+.+.|+++++ .+.+ |+=||. | +-...++|.+-.
T Consensus 32 ~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~------~gv~~VigIS~-D-----~~~~~~~w~~~~ 98 (171)
T 2xhf_A 32 KSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKE------EGYHTIACIAV-N-----DPFVMAAWGKTV 98 (171)
T ss_dssp CEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHH------TTCCEEEEEES-S-----CHHHHHHHHHHH
T ss_pred cEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH------CCCCEEEEEeC-C-----CHHHHHHHHHhc
Confidence 7999999 5999988887554 455454 7779999999963 3475 888985 3 234566776544
No 253
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=82.65 E-value=3.3 Score=32.90 Aligned_cols=45 Identities=7% Similarity=-0.037 Sum_probs=36.3
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
+.||.+.++|.+++ .+|+.+.+.+.++++..+..+.++.|.-+..
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~ 63 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQN 63 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTC
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCC
Confidence 47899999998853 6679999999999887665788888877654
No 254
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=82.35 E-value=3.4 Score=35.31 Aligned_cols=52 Identities=8% Similarity=-0.058 Sum_probs=40.1
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|+|.+. -..|+.+.+.+.++++.. +..+.++.|+.|...+.+++.+
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~ 86 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYM 86 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHH
Confidence 789999999874 355688999998887754 4459999999987666665544
No 255
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=82.26 E-value=2.6 Score=36.50 Aligned_cols=57 Identities=4% Similarity=-0.080 Sum_probs=41.6
Q ss_pred CccccccCceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 009735 319 VIPTWIMEQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 319 ~I~~~i~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.++++ .||.+.|+|.+. -..|+...+.+.++++.. +..++++.|+.|..++.+++..
T Consensus 29 ~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~ 87 (152)
T 2lrt_A 29 SLTDL--KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSA 87 (152)
T ss_dssp CTTTG--GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHH
T ss_pred eHHHh--CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHH
Confidence 34444 799999999884 244588888888887753 3469999999998777665543
No 256
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=82.26 E-value=14 Score=32.94 Aligned_cols=84 Identities=15% Similarity=0.141 Sum_probs=0.0
Q ss_pred cCcEEEEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchh-----------------------
Q 009735 166 RRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEA----------------------- 222 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~----------------------- 222 (527)
.+|.+++.|++.|||.|... .....++.+ +.+.++.++.+|+ .+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~--~~~l~~l~~---~~~~~v~~~~~p~-----~~~~~~~~aa~a~~aa~~~g~~~~~~~~ 93 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAF--EPTIVPWSE---KLPADVHFVRLPA-----LFGGIWNVHGQMFLTLESMGVEHDVHNA 93 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHH--HHHHHHHHH---TCCTTEEEEEEEC-----CCSTHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred CCCCEEEEEECCCChhHHHh--hHHHHHHHH---hCCCCeEEEEEeh-----hhccchHHHHHHHHHHHHcCCHHHHHHH
Q ss_pred ---------------------------hHHHHHHhhcCCCceeecCCCCCCHHHHHHHH------HhhCCCCCcEEEEeC
Q 009735 223 ---------------------------KEHKFEALQYMMPWFSVHHPSAIDPAVIRYAK------EKWDFRKKPILVVLD 269 (527)
Q Consensus 223 ---------------------------~~~~F~~~~~~MPWyAVpf~~~i~~~~~r~ik------e~~~~~~iP~LVvL~ 269 (527)
+.+.|.... + +.+....++ +.+++.|.|+++|
T Consensus 94 lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~-----------~--~~~~~~~v~~~~~~a~~~gv~gtPt~~v-- 158 (192)
T 3h93_A 94 VFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLSTY-----------N--SFAIKGQMEKAKKLAMAYQVTGVPTMVV-- 158 (192)
T ss_dssp HHHHHHTSCCCCCSHHHHHHHHHTTTCCHHHHHHHH-----------T--CHHHHHHHHHHHHHHHHHTCCSSSEEEE--
T ss_pred HHHHHHHhCcCCCCHHHHHHHHHHcCCCHHHHHHHh-----------h--CHHHHHHHHHHHHHHHHhCCCCCCeEEE--
Q ss_pred CCCcee
Q 009735 270 PQGRVV 275 (527)
Q Consensus 270 pqGkv~ 275 (527)
+|+.+
T Consensus 159 -ng~~~ 163 (192)
T 3h93_A 159 -NGKYR 163 (192)
T ss_dssp -TTTEE
T ss_pred -CCEEE
No 257
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=82.21 E-value=2.9 Score=35.68 Aligned_cols=58 Identities=9% Similarity=-0.016 Sum_probs=41.9
Q ss_pred cCCCCccccccCceEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhh
Q 009735 315 SVDPVIPTWIMEQKHICLYGGEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARR 375 (527)
Q Consensus 315 ~id~~I~~~i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~ 375 (527)
|-...+++. .||.+.|+|.+.+ ..|+...+.+.++++.. +..++++.|+.|++ +.+++
T Consensus 14 G~~~~l~~~--~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~-~~~~~ 73 (151)
T 3raz_A 14 NTPQSLQSL--KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTS-DNIGN 73 (151)
T ss_dssp CCEECGGGC--CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCH-HHHHH
T ss_pred CCEecHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCh-HHHHH
Confidence 333344554 8999999998852 55689999999987753 66899999999865 34443
No 258
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=82.06 E-value=2.9 Score=33.63 Aligned_cols=47 Identities=13% Similarity=0.076 Sum_probs=37.1
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 371 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e 371 (527)
+.||.+.++|.+++ .+|+++.+.+.++++..+..+.++.|.-+...+
T Consensus 21 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~ 68 (112)
T 1t00_A 21 KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPG 68 (112)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHH
Confidence 47899999998853 667999999999988765568888888775443
No 259
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=81.80 E-value=2.2 Score=36.93 Aligned_cols=46 Identities=4% Similarity=-0.024 Sum_probs=36.4
Q ss_pred CccccccCceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 009735 319 VIPTWIMEQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKS 367 (527)
Q Consensus 319 ~I~~~i~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd 367 (527)
.+.+. .||.+.|+|.+. -..|+...+.+.++++..+ .++++.|+.|
T Consensus 31 ~l~~~--~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d 77 (165)
T 3ha9_A 31 SLNNV--GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFW 77 (165)
T ss_dssp CGGGC--CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECC
T ss_pred eHHHh--CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEec
Confidence 34443 789999999873 2456999999999988766 9999999988
No 260
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=81.79 E-value=3 Score=33.13 Aligned_cols=46 Identities=7% Similarity=-0.059 Sum_probs=36.7
Q ss_pred cCceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 325 MEQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 325 ~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
..||.+.++|.++ -.+|+.+.+.+.++++..+..+.++.|..+...
T Consensus 17 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~ 63 (107)
T 1dby_A 17 ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESP 63 (107)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH
T ss_pred cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCH
Confidence 3688899999885 377799999999998876666888888877544
No 261
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=81.60 E-value=2.5 Score=35.43 Aligned_cols=52 Identities=15% Similarity=0.128 Sum_probs=38.7
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHH---HHHH-hCCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGA---VARA-AGIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~---i~~~-~~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|+|.+. -..|+...+.+.+ +++. .+..++++.|+.|...+.+++.+
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~ 82 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKA 82 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHH
Confidence 799999999884 2556888777776 6553 24569999999997777766554
No 262
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=81.44 E-value=2.6 Score=35.25 Aligned_cols=47 Identities=17% Similarity=0.112 Sum_probs=38.0
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
...||.+.++|.+.+ .+|+++.+.+.++++..+..+.++.|.-+...
T Consensus 39 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~ 86 (128)
T 3ul3_B 39 NMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNE 86 (128)
T ss_dssp TSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCH
T ss_pred HccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH
Confidence 458999999999953 66799999999998876667888888877543
No 263
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=81.32 E-value=4.1 Score=33.00 Aligned_cols=39 Identities=18% Similarity=0.037 Sum_probs=32.3
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEe
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYV 364 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~V 364 (527)
.||.+.|||.+. -..|+...+.+.++++..+..+.++.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i 60 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTV 60 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEE
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 799999999884 255688888998988776778999998
No 264
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=81.09 E-value=4.4 Score=31.88 Aligned_cols=45 Identities=9% Similarity=-0.066 Sum_probs=36.5
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
.||.+.++|.+++ .+|+++.+.+.++++..+..+.++.|..++..
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~ 64 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECE 64 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchH
Confidence 7899999998863 67799999999998876567888888877543
No 265
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=80.94 E-value=2.8 Score=33.52 Aligned_cols=47 Identities=9% Similarity=0.043 Sum_probs=37.2
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 371 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e 371 (527)
..||.+.+||.+++ .+|+++.+.+.++++..+..+.++.|.-+...+
T Consensus 23 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~ 70 (115)
T 1thx_A 23 KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPT 70 (115)
T ss_dssp TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHH
T ss_pred cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHH
Confidence 47899999998853 667999999999988765568888888775443
No 266
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=80.88 E-value=3.2 Score=33.68 Aligned_cols=46 Identities=7% Similarity=-0.012 Sum_probs=36.4
Q ss_pred cCceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 325 MEQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 325 ~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
..||.+.+||+++ -.+|+++.+.+.++++..+..+.++.|.-+...
T Consensus 28 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 74 (121)
T 2i1u_A 28 SSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNP 74 (121)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCH
Confidence 4789999999885 366799999999998876557888888777543
No 267
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=80.47 E-value=3.6 Score=34.02 Aligned_cols=43 Identities=12% Similarity=-0.053 Sum_probs=35.4
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhC-CceeEEEeccCC
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAG-IALEMLYVGKSN 368 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~-~~~E~v~Vgkd~ 368 (527)
.||.+.|+|.+. -..|+.+.+.+.++++..+ ..++++.|+.+.
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 77 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVN 77 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGG
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccC
Confidence 889999999874 3667999999999987644 689999998875
No 268
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=80.10 E-value=3.4 Score=34.10 Aligned_cols=46 Identities=4% Similarity=-0.084 Sum_probs=36.5
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
+.||.+.|||.+++ ..|+++.+.+.++++..+..+.++.|.-++..
T Consensus 29 ~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~ 75 (119)
T 1w4v_A 29 NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHT 75 (119)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTH
T ss_pred cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCH
Confidence 47899999998853 66799999999998765557888888877543
No 269
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=79.98 E-value=3.8 Score=32.18 Aligned_cols=45 Identities=2% Similarity=-0.028 Sum_probs=35.6
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
.||.+.++|.++ -.+|+.+.+.+.++++..+..+.++.|.-++..
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 62 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP 62 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchH
Confidence 678888888885 366799999999998876666888888777543
No 270
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=79.93 E-value=3.6 Score=34.91 Aligned_cols=52 Identities=15% Similarity=0.063 Sum_probs=39.8
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|+|.+. -..|+...+.+.++++.. +..+.++.|+.+...+.+++..
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~ 78 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFM 78 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHH
Confidence 789999999884 356688888888887653 3469999999887666665544
No 271
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=79.90 E-value=3.4 Score=33.63 Aligned_cols=46 Identities=4% Similarity=-0.034 Sum_probs=35.5
Q ss_pred cccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 323 WIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 323 ~i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
.++.||.+.++|.+++ .+|+++.+.+.++++..+ .+.++.|..+..
T Consensus 20 ~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-~~~~~~vd~~~~ 66 (109)
T 3f3q_A 20 AIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDEL 66 (109)
T ss_dssp HTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTC
T ss_pred HHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCC
Confidence 3568999999999963 667999999999987632 377777776644
No 272
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=79.47 E-value=2.1 Score=37.66 Aligned_cols=66 Identities=5% Similarity=-0.072 Sum_probs=41.4
Q ss_pred HHhCCccccCChhhHHHhhhhcccceeeccccCCCCccccccCceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeE
Q 009735 284 WIWGSVAFPFSVAREEALWKEETWRIDLLADSVDPVIPTWIMEQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEM 361 (527)
Q Consensus 284 ~~wG~~AfPFT~~r~e~L~~~e~w~lelL~d~id~~I~~~i~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~ 361 (527)
.-+|+.|++|+-.. .+|-...+++. .||.+.|+|.+. -..|+ ..+.+.+++++. +..+++
T Consensus 6 ~~~~~~~~~f~l~d---------------~~G~~~~l~~~--~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~v 67 (171)
T 3cmi_A 6 HHHMSEFYKLAPVD---------------KKGQPFPFDQL--KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTI 67 (171)
T ss_dssp ----CGGGGCCCBB---------------TTSCBCCGGGG--TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEE
T ss_pred ccchhheeeeEEEc---------------CCCCEecHHHc--CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEE
Confidence 35688888883210 12333344554 799999999883 13348 888888887653 346999
Q ss_pred EEeccC
Q 009735 362 LYVGKS 367 (527)
Q Consensus 362 v~Vgkd 367 (527)
+.|+.|
T Consensus 68 v~vs~d 73 (171)
T 3cmi_A 68 IGFPCN 73 (171)
T ss_dssp EEEEEC
T ss_pred EEEECc
Confidence 999874
No 273
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=79.12 E-value=3.6 Score=33.73 Aligned_cols=51 Identities=12% Similarity=0.087 Sum_probs=40.2
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|+|.+. -..|+++.+.+.++++..+ .++++.|+.+...+.+++..
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~ 74 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFV 74 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHH
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHH
Confidence 789999988874 3556889999999987656 89999999887666666654
No 274
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=78.85 E-value=4.7 Score=32.52 Aligned_cols=25 Identities=12% Similarity=0.242 Sum_probs=18.2
Q ss_pred HHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 249 VIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 249 ~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
....+.+.+++++.|++++ +|+.+.
T Consensus 56 ~~~~l~~~~g~~~vP~i~~---~g~~i~ 80 (105)
T 1kte_A 56 IQDYLQQLTGARTVPRVFI---GKECIG 80 (105)
T ss_dssp HHHHHHHHHSCCCSCEEEE---TTEEEE
T ss_pred HHHHHHHHhCCCCcCeEEE---CCEEEe
Confidence 4456677789999999865 577653
No 275
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=78.80 E-value=3.3 Score=35.37 Aligned_cols=68 Identities=4% Similarity=0.110 Sum_probs=43.7
Q ss_pred CcEEEEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCCCC
Q 009735 167 RKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAID 246 (527)
Q Consensus 167 gK~VlLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~i~ 246 (527)
++.|+++|.|. |++|. .+..+++++-. +-++++.+++|-+ | + |
T Consensus 23 ~~pv~v~f~a~-~~~c~--~~~p~l~~~A~---~~~gk~~f~~vd~--------d--~--~------------------- 65 (133)
T 2djk_A 23 GIPLAYIFAET-AEERK--ELSDKLKPIAE---AQRGVINFGTIDA--------K--A--F------------------- 65 (133)
T ss_dssp TSCEEEEECSC-SSSHH--HHHHHHHHHHH---SSTTTSEEEEECT--------T--T--T-------------------
T ss_pred CCCEEEEEecC-hhhHH--HHHHHHHHHHH---HhCCeEEEEEEch--------H--H--h-------------------
Confidence 46688888888 67776 45556666532 2345677777742 2 1 1
Q ss_pred HHHHHHHHHhhCCCC--CcEEEEeCC-CCcee
Q 009735 247 PAVIRYAKEKWDFRK--KPILVVLDP-QGRVV 275 (527)
Q Consensus 247 ~~~~r~ike~~~~~~--iP~LVvL~p-qGkv~ 275 (527)
..+.+.|++++ +|+|++++. +|+..
T Consensus 66 ----~~~a~~~gi~~~~iPtl~i~~~~~g~~~ 93 (133)
T 2djk_A 66 ----GAHAGNLNLKTDKFPAFAIQEVAKNQKF 93 (133)
T ss_dssp ----GGGTTTTTCCSSSSSEEEEECTTTCCBC
T ss_pred ----HHHHHHcCCCcccCCEEEEEecCcCccc
Confidence 01335578888 999999984 67664
No 276
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=78.72 E-value=2.7 Score=37.41 Aligned_cols=48 Identities=4% Similarity=-0.032 Sum_probs=35.8
Q ss_pred CccccccCceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCC
Q 009735 319 VIPTWIMEQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSN 368 (527)
Q Consensus 319 ~I~~~i~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~ 368 (527)
.+++. .||.+.|+|.+. -..|+.-.+.+.++++.. +..++++.|+.|.
T Consensus 32 ~l~~~--~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~ 81 (180)
T 3kij_A 32 SLEKY--KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQ 81 (180)
T ss_dssp EGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCC
T ss_pred cHHHc--CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCc
Confidence 34444 899999999883 244588888899987764 4469999998664
No 277
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=78.60 E-value=6.5 Score=33.42 Aligned_cols=62 Identities=6% Similarity=-0.066 Sum_probs=41.6
Q ss_pred ccCCCCccccccCceEEEEEccCC-hhHHHHH-HHHHHHHHHHhC-CceeEEEeccC------Cchhhhhhhh
Q 009735 314 DSVDPVIPTWIMEQKHICLYGGED-LEWVRKF-TALMGAVARAAG-IALEMLYVGKS------NPKEKARRII 377 (527)
Q Consensus 314 d~id~~I~~~i~egK~I~LYgg~d-~~Wi~~F-T~~~~~i~~~~~-~~~E~v~Vgkd------~~~e~v~~~~ 377 (527)
+|-...++++ .||.+.|+|.+. -..|+.. .+.+.++++..+ ..++++.|+.+ ...+.+++.+
T Consensus 19 ~g~~~~l~~~--~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~ 89 (160)
T 3lor_A 19 NHEGLSNEDL--RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFI 89 (160)
T ss_dssp SSCCCCHHHH--TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHH
T ss_pred CCCccCHHHh--CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHH
Confidence 3433344554 799999999884 2455774 888888877643 46999999863 3445555544
No 278
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=78.29 E-value=3.4 Score=33.53 Aligned_cols=46 Identities=4% Similarity=0.031 Sum_probs=35.8
Q ss_pred ccCceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 324 IMEQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 324 i~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
++.||.+.+||.++ -.+|+++.+.+.++++..+ .+.++.|.-+...
T Consensus 23 ~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~~ 69 (112)
T 1syr_A 23 ISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVS 69 (112)
T ss_dssp HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTTH
T ss_pred HccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCCH
Confidence 56899999999886 3777999999999987633 5788888776543
No 279
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=78.25 E-value=4.2 Score=34.44 Aligned_cols=46 Identities=9% Similarity=0.012 Sum_probs=36.4
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
+.||.+.++|.+++ .+|+++.+.+.++++..+..+.++.|.-+...
T Consensus 36 ~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~ 82 (136)
T 2l5l_A 36 EGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQ 82 (136)
T ss_dssp CCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH
T ss_pred cCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCH
Confidence 46889999998853 66799999999998876656888888877543
No 280
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=78.01 E-value=4 Score=34.95 Aligned_cols=50 Identities=8% Similarity=0.058 Sum_probs=39.9
Q ss_pred ccccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 009735 322 TWIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 371 (527)
Q Consensus 322 ~~i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e 371 (527)
..+..||.+.++|.+++ ..|+++.+.+.++++..+..+.++.|..+...+
T Consensus 50 ~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~ 100 (148)
T 3p2a_A 50 KLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPA 100 (148)
T ss_dssp HHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred HHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHH
Confidence 33568999999999853 667999999999988766678888888876543
No 281
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.92 E-value=4.4 Score=34.93 Aligned_cols=25 Identities=16% Similarity=0.138 Sum_probs=19.0
Q ss_pred HHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 249 VIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 249 ~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.+.+++...|++++ +|+.+.
T Consensus 68 ~~~~l~~~~g~~~vP~l~i---~G~~ig 92 (130)
T 2cq9_A 68 FQDALYKMTGERTVPRIFV---NGTFIG 92 (130)
T ss_dssp HHHHHHHHHSSCCSSEEEE---TTEEEE
T ss_pred HHHHHHHHhCCCCcCEEEE---CCEEEc
Confidence 4456778889999999865 677764
No 282
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=77.92 E-value=3.9 Score=31.74 Aligned_cols=47 Identities=2% Similarity=-0.065 Sum_probs=36.2
Q ss_pred ccCceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 009735 324 IMEQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 371 (527)
Q Consensus 324 i~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e 371 (527)
+..||.+.++|.++ -.+|+++.+.+.++++..+. +.++.|..++..+
T Consensus 13 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~ 60 (104)
T 2e0q_A 13 LASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPD 60 (104)
T ss_dssp HHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH
T ss_pred HhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHH
Confidence 45789999999885 36679999999999876443 8888888775443
No 283
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=77.67 E-value=4.6 Score=32.12 Aligned_cols=46 Identities=15% Similarity=0.101 Sum_probs=37.0
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
..+|.+.++|.+++ ..|+.+.+.+.++++..+..+.++.|.-+...
T Consensus 20 ~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~ 66 (111)
T 3gnj_A 20 DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEK 66 (111)
T ss_dssp TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH
T ss_pred hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcCh
Confidence 57899999998853 66799999999998876667888888877544
No 284
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=77.61 E-value=4.1 Score=34.74 Aligned_cols=48 Identities=6% Similarity=-0.014 Sum_probs=38.0
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 371 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e 371 (527)
+..+|.+.++|.+++ ..|++|.+.+.++++..+..+.++.|.-++..+
T Consensus 21 ~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~ 69 (140)
T 3hz4_A 21 EDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPW 69 (140)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHH
T ss_pred HhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHh
Confidence 347899999998853 667999999999988766678888888775543
No 285
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=77.41 E-value=7.1 Score=33.18 Aligned_cols=61 Identities=11% Similarity=-0.022 Sum_probs=41.9
Q ss_pred cCCCCccccccCceEEEEEccCC-hhHHHHH-HHHHHHHHHHhC-CceeEEEeccC------Cchhhhhhhh
Q 009735 315 SVDPVIPTWIMEQKHICLYGGED-LEWVRKF-TALMGAVARAAG-IALEMLYVGKS------NPKEKARRII 377 (527)
Q Consensus 315 ~id~~I~~~i~egK~I~LYgg~d-~~Wi~~F-T~~~~~i~~~~~-~~~E~v~Vgkd------~~~e~v~~~~ 377 (527)
|-...+++. .||.+.|+|.+. -..|+.. .+.+.++++..+ ..++++.|+.+ +..+.+++.+
T Consensus 18 g~~~~l~~~--~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~ 87 (158)
T 3eyt_A 18 ATDLTLADL--RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFL 87 (158)
T ss_dssp SSCCCTGGG--TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHH
T ss_pred CCccCHHHh--CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHH
Confidence 333344554 799999999884 2556886 888989887643 57999999964 3445555544
No 286
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=77.38 E-value=6.2 Score=33.32 Aligned_cols=52 Identities=15% Similarity=0.057 Sum_probs=38.9
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCc-hhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNP-KEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~-~e~v~~~~ 377 (527)
.||.+.|+|.+. -..|+...+.+.++++.. +..+.++.|+.|.. .+.+++..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~ 81 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFF 81 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHH
Confidence 789999999874 356688888898887764 45899999999865 44444433
No 287
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=78.87 E-value=0.48 Score=39.78 Aligned_cols=48 Identities=19% Similarity=0.452 Sum_probs=37.1
Q ss_pred Cce-EEEEEccCChhHH---HHHHHHHHHHHHHh---CCceeEEEeccCCchhhhhh
Q 009735 326 EQK-HICLYGGEDLEWV---RKFTALMGAVARAA---GIALEMLYVGKSNPKEKARR 375 (527)
Q Consensus 326 egK-~I~LYgg~d~~Wi---~~FT~~~~~i~~~~---~~~~E~v~Vgkd~~~e~v~~ 375 (527)
.|| .+.|||.+ .|| +.+.+.+.++++.. +..++++.|+.|...+.+++
T Consensus 24 ~gk~~vll~F~a--~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~ 78 (143)
T 2lus_A 24 KDKDIIGFYFSA--HWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQ 78 (143)
Confidence 788 99999999 565 88888888886643 45899999999866555544
No 288
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=76.82 E-value=3.5 Score=34.11 Aligned_cols=44 Identities=9% Similarity=0.092 Sum_probs=36.0
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEec--cC
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVG--KS 367 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vg--kd 367 (527)
...||.+.++|.+++ .+|+++.+.+.++++..+..+.++.|. .|
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d 69 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEE 69 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSS
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCC
Confidence 458999999998863 777999999999988765678889888 55
No 289
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=76.59 E-value=4.1 Score=34.26 Aligned_cols=46 Identities=9% Similarity=0.008 Sum_probs=37.2
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 371 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e 371 (527)
.||.+.++|.+.+ .+|+.+.+.+.++++..+..+.++.|.-++..+
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 96 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPE 96 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHH
Confidence 7899999999853 566999999999988766678888888875543
No 290
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=76.45 E-value=3.9 Score=34.63 Aligned_cols=45 Identities=7% Similarity=-0.036 Sum_probs=36.5
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
..||.+.++|.+++ .+|+++.+.+.++++..+..+.++.|.-+..
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~ 83 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQN 83 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTC
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCC
Confidence 57899999999863 6679999999999887655788888877743
No 291
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=76.45 E-value=4.3 Score=32.52 Aligned_cols=46 Identities=13% Similarity=0.035 Sum_probs=35.8
Q ss_pred cccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 323 WIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 323 ~i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
.++.||.+.+||.+++ ..|+.+.+.+.++++.. ..+.++.|.-+..
T Consensus 14 ~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~~~~ 60 (105)
T 4euy_A 14 YIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENY-NYVEKIEILLQDM 60 (105)
T ss_dssp STTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTC-TTEEEEEEEECCC
T ss_pred HHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHc-CCceEEEEECCCC
Confidence 3468999999999953 55699999999998764 3688888877644
No 292
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=76.31 E-value=5.2 Score=32.63 Aligned_cols=47 Identities=11% Similarity=-0.070 Sum_probs=36.9
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
+..+|.+.++|.+++ .+|+.+.+.+.++++..+..+.++.|.-+...
T Consensus 18 ~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 65 (122)
T 3aps_A 18 LQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYP 65 (122)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCH
T ss_pred hcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCH
Confidence 347899999998853 66799999999998865557888888777543
No 293
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=76.17 E-value=3.5 Score=35.69 Aligned_cols=50 Identities=10% Similarity=0.080 Sum_probs=38.6
Q ss_pred cCceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhhhh
Q 009735 325 MEQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 325 ~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
..||.+.|+|.+. -..|+.+.+.+.++++. .++++.|+.++..+.+++..
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~ 99 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWL 99 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHH
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHH
Confidence 4899999999874 35568899999888764 68899999777666666544
No 294
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=75.99 E-value=10 Score=35.06 Aligned_cols=99 Identities=8% Similarity=0.085 Sum_probs=60.8
Q ss_pred ceeeccc-ccCcEEEEEEec-CCCChhH---HHHHHHHHHHH-hhhccCCCCCeE-EEEEeccCCCCCcchhhHHHHHHh
Q 009735 158 RKVSIDV-LRRKSVLLLVSD-LDVSNEE---LFLLEQMYRES-RQLSSRTESQYE-VVWLPIVDRSTPWTEAKEHKFEAL 230 (527)
Q Consensus 158 ~kV~Is~-L~gK~VlLyfSa-l~~~~~~---~~~L~~iY~~l-k~~~~~~~~~fE-IVwIpiVd~s~~w~D~~~~~F~~~ 230 (527)
+.|++++ ++||.|.|||=- .|+|.|- +..+.+.|.++ ++ .+.+ |+=||. | +-...+.|.+-
T Consensus 33 ~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~------~g~~~V~gvS~-D-----~~~~~~~~~~~ 100 (182)
T 1xiy_A 33 TSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKE------NNFDDIYCITN-N-----DIYVLKSWFKS 100 (182)
T ss_dssp EEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT------SCCSEEEEEES-S-----CHHHHHHHHHH
T ss_pred eeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHh------CCCcEEEEEeC-C-----CHHHHHHHHHH
Confidence 6899988 699988887654 4566565 55689999998 72 3475 777885 3 23345667653
Q ss_pred hc--CCCceeecCCCCCCHHHHHHHHHhhCCC------C-----CcEEEEeCCCCceeccc
Q 009735 231 QY--MMPWFSVHHPSAIDPAVIRYAKEKWDFR------K-----KPILVVLDPQGRVVNQN 278 (527)
Q Consensus 231 ~~--~MPWyAVpf~~~i~~~~~r~ike~~~~~------~-----iP~LVvL~pqGkv~~~n 278 (527)
.. ..|-+| |.. +.+.+.|++- | .....|+| +|+|....
T Consensus 101 ~~~~~f~lLs-------D~~--~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~~ 151 (182)
T 1xiy_A 101 MDIKKIKYIS-------DGN--SSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKMF 151 (182)
T ss_dssp TTCCSSEEEE-------CTT--SHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEEE
T ss_pred cCCCCceEEE-------eCc--hHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEEE
Confidence 32 122222 222 3334445542 2 35566778 99998764
No 295
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=75.40 E-value=2 Score=33.20 Aligned_cols=64 Identities=13% Similarity=0.151 Sum_probs=39.1
Q ss_pred EEEEecCCCChhHH--HHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCCCCHH
Q 009735 171 LLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAIDPA 248 (527)
Q Consensus 171 lLyfSal~~~~~~~--~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~i~~~ 248 (527)
.++|++.|||+|.. +.|.++-.+. .+++++.|-+ |++. .
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~--------~~i~~~~vdi--------~~~~------------------~----- 43 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNER--------DDFQYQYVDI--------RAEG------------------I----- 43 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHH--------SSCEEEEECH--------HHHT------------------C-----
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcC--------CCceEEEEec--------ccCh------------------H-----
Confidence 46789999999983 3455544332 2477777754 2211 0
Q ss_pred HHHHHHHhhC--CCCCcEEEEeCCCCceec
Q 009735 249 VIRYAKEKWD--FRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 249 ~~r~ike~~~--~~~iP~LVvL~pqGkv~~ 276 (527)
....+.+.++ +.+.|++++ +|+.+.
T Consensus 44 ~~~~l~~~~~~~~~~vP~i~~---~g~~i~ 70 (85)
T 1ego_A 44 TKEDLQQKAGKPVETVPQIFV---DQQHIG 70 (85)
T ss_dssp CSHHHHHHTCCCSCCSCEEEE---TTEEEE
T ss_pred HHHHHHHHhCCCCceeCeEEE---CCEEEE
Confidence 0123556677 899999854 577763
No 296
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=75.22 E-value=3.4 Score=35.59 Aligned_cols=42 Identities=14% Similarity=0.025 Sum_probs=32.5
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccC
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKS 367 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd 367 (527)
.||.+.|+|.+. -..|+...+.+.++++.. +..++++.|+.|
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d 74 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCN 74 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECC
Confidence 799999999883 133488888888887753 345999999976
No 297
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=75.11 E-value=7.5 Score=30.94 Aligned_cols=45 Identities=16% Similarity=0.107 Sum_probs=35.1
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 371 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e 371 (527)
.||.+.++|.++ -.+|+++.+.+.++++..+ .+.++.|.-++..+
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~ 70 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKA 70 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHH
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHH
Confidence 589999999886 3777999999999987644 68888887775443
No 298
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=74.96 E-value=3.7 Score=43.49 Aligned_cols=70 Identities=11% Similarity=0.027 Sum_probs=43.9
Q ss_pred cccCcEEEEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCC
Q 009735 164 VLRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 164 ~L~gK~VlLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~ 243 (527)
.+.++.....|++.||++|.. +.++.+++... ..+.++.-|-+ |+
T Consensus 114 ~~~~~~~i~~f~a~~C~~C~~--~~~~l~~~a~~----~~~v~~~~vd~--------~~--------------------- 158 (521)
T 1hyu_A 114 DIDGDFEFETYYSLSCHNCPD--VVQALNLMAVL----NPRIKHTAIDG--------GT--------------------- 158 (521)
T ss_dssp HCCSCEEEEEEECTTCSSHHH--HHHHHHHHHHH----CTTEEEEEEET--------TT---------------------
T ss_pred hcCCCcceEEEECCCCcCcHH--HHHHHHHHHhH----cCceEEEEEec--------hh---------------------
Confidence 345788899999999999983 22333333211 12455544422 21
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecc
Q 009735 244 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 277 (527)
Q Consensus 244 ~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 277 (527)
..-+.++|+++++|++++ +|+.+..
T Consensus 159 ------~~~~~~~~~i~svPt~~i---~g~~~~~ 183 (521)
T 1hyu_A 159 ------FQNEITERNVMGVPAVFV---NGKEFGQ 183 (521)
T ss_dssp ------CHHHHHHTTCCSSSEEEE---TTEEEEE
T ss_pred ------hHHHHHHhCCCccCEEEE---CCEEEec
Confidence 123567779999999988 8888743
No 299
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=74.77 E-value=3.5 Score=33.53 Aligned_cols=44 Identities=5% Similarity=0.003 Sum_probs=35.4
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
.||.+.++|.+++ .+|+++.+.+.++++..+..+.++.|.-+..
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~ 60 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDEN 60 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCC
Confidence 7899999998853 5569999999999887655788888887754
No 300
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=74.76 E-value=2.8 Score=35.43 Aligned_cols=52 Identities=10% Similarity=0.030 Sum_probs=39.7
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|+|.+. -..|+...+.+.++++.. +..+.++.|+.|...+.+++..
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~ 82 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMV 82 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHH
Confidence 789999999874 355688899998887753 4579999999887666655543
No 301
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=74.24 E-value=6.2 Score=32.68 Aligned_cols=43 Identities=7% Similarity=-0.093 Sum_probs=33.8
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSN 368 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~ 368 (527)
.||.+.|+|.+. -..|+.+.+.+.++++..+..+.++.|+.+.
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~ 71 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPR 71 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCC
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCC
Confidence 789888888874 3566999999999877644449999998764
No 302
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=74.06 E-value=4.9 Score=32.08 Aligned_cols=44 Identities=11% Similarity=0.009 Sum_probs=34.9
Q ss_pred ceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 327 QKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 327 gK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
||.+.++|.+++ .+|+.+.+.+.++++..+..+.++.|..+...
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~ 68 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVA 68 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchH
Confidence 889999998853 67799999999998765547888888877543
No 303
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=73.87 E-value=3.8 Score=36.84 Aligned_cols=48 Identities=4% Similarity=-0.002 Sum_probs=35.4
Q ss_pred CccccccCceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCC
Q 009735 319 VIPTWIMEQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSN 368 (527)
Q Consensus 319 ~I~~~i~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~ 368 (527)
.+++. .||.+.|+|.+. -..|+...+.+.++++.. +..++++.|+.|.
T Consensus 42 ~l~~~--~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~ 91 (190)
T 2vup_A 42 NLVQH--KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQ 91 (190)
T ss_dssp CGGGG--TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCC
T ss_pred EHHHc--CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCc
Confidence 44444 899999999883 133478888888887753 3469999999873
No 304
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=73.58 E-value=5.4 Score=32.63 Aligned_cols=43 Identities=12% Similarity=0.364 Sum_probs=32.5
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 368 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~ 368 (527)
+..|+.+.+||++.+ .+|+.+.+.+.+++++.+ ..++++..+.
T Consensus 26 ~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~--~~v~~~~~~~ 69 (118)
T 1zma_A 26 LDKKETATFFIGRKTCPYCRKFAGTLSGVVAETK--AHIYFINSEE 69 (118)
T ss_dssp HHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC--CCCEEEETTC
T ss_pred HhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcC--CeEEEEECCC
Confidence 557899999999953 667999999999987655 3466665543
No 305
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=73.53 E-value=6.5 Score=30.70 Aligned_cols=44 Identities=14% Similarity=0.057 Sum_probs=33.9
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
.||.+.++|.++ -.+|+.+.+.+.++++..+ .+.++.|.-++..
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~ 62 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNE 62 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCH
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCH
Confidence 789999988885 3777999999999977643 6777777776543
No 306
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=73.46 E-value=2.5 Score=35.34 Aligned_cols=43 Identities=12% Similarity=0.059 Sum_probs=34.8
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHH--HHHHHhCCceeEEEeccC
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMG--AVARAAGIALEMLYVGKS 367 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~--~i~~~~~~~~E~v~Vgkd 367 (527)
..||.+.|||++++ .+|+.+.+.+. ++++..+..+.++.|.-+
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~ 72 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVG 72 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECT
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCC
Confidence 47999999999963 66799999998 887765557888888773
No 307
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=72.64 E-value=4.2 Score=36.30 Aligned_cols=43 Identities=5% Similarity=-0.024 Sum_probs=33.1
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCC
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSN 368 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~ 368 (527)
.||.+.|+|.+. -..|+...+.+.+++++. +..++++.|+.|.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~ 92 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQ 92 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcC
Confidence 799999999883 234588888888887753 3459999998763
No 308
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=72.62 E-value=4.9 Score=33.20 Aligned_cols=46 Identities=4% Similarity=-0.025 Sum_probs=35.2
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
++.||.+.++|.+++ .+|+++.+.+.+++++.+. +.++.|.-+...
T Consensus 27 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~ 73 (114)
T 2oe3_A 27 IKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESP 73 (114)
T ss_dssp HHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCH
T ss_pred HhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCH
Confidence 558999999999853 6679999999999876433 777888776543
No 309
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.35 E-value=5.9 Score=32.67 Aligned_cols=45 Identities=7% Similarity=-0.096 Sum_probs=34.7
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhC----CceeEEEeccCCc
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAG----IALEMLYVGKSNP 369 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~----~~~E~v~Vgkd~~ 369 (527)
..+|.+.++|.+++ .+|+++.+.+.++++..+ ..+.++.|.-+..
T Consensus 23 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 72 (133)
T 1x5d_A 23 DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVN 72 (133)
T ss_dssp TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTC
T ss_pred cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCC
Confidence 47899999999853 667999999988877543 5688888877643
No 310
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=71.77 E-value=5.4 Score=35.48 Aligned_cols=50 Identities=8% Similarity=-0.026 Sum_probs=38.1
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARRIIS 378 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e~v~~~~~ 378 (527)
.||.+.|||.+. -..|+...+.+.++++. .++++.|+.++..+.+++.++
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~ 107 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLN 107 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHH
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHH
Confidence 699999999874 24568888888888764 699999997766677666553
No 311
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=71.57 E-value=7.7 Score=30.44 Aligned_cols=44 Identities=7% Similarity=0.032 Sum_probs=34.1
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
.||.+.+||.+++ ..|+++.+.+.++++..+ .+.++.|..+...
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~~ 63 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS-NVIFLEVDVDDCQ 63 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHST-TSEEEEEETTTCH
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHcc-CeEEEEEEhhhhH
Confidence 6899999998853 666999999999987643 3788888777543
No 312
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=71.30 E-value=5.5 Score=33.64 Aligned_cols=50 Identities=10% Similarity=0.109 Sum_probs=38.2
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|+|.+. -.+|+.+.+.+.++++. ..++++.|+.+...+.+++..
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~ 91 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFL 91 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHH
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHH
Confidence 689888888874 36678899998888654 468999999877666666554
No 313
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=71.28 E-value=6.4 Score=34.95 Aligned_cols=42 Identities=5% Similarity=-0.179 Sum_probs=32.4
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccC
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKS 367 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd 367 (527)
.||.+.|+|.+. -..|+...+.+.++++.. +..++++.|+.|
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 89 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCN 89 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECC
Confidence 799999999883 234478888888887753 346999999876
No 314
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=71.07 E-value=9.7 Score=31.81 Aligned_cols=44 Identities=11% Similarity=0.067 Sum_probs=34.4
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
.||.+.+||.+++ ..|+++.+.+.++++..+ .+.++.|.-|...
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~ 81 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELK 81 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCH
Confidence 5899999999853 666999999999987644 6888888777543
No 315
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=70.79 E-value=2.6 Score=38.00 Aligned_cols=46 Identities=4% Similarity=-0.049 Sum_probs=35.5
Q ss_pred CCccccccCceEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeEEEeccC
Q 009735 318 PVIPTWIMEQKHICLYGGEDLEWV---RKFTALMGAVARAA-GIALEMLYVGKS 367 (527)
Q Consensus 318 ~~I~~~i~egK~I~LYgg~d~~Wi---~~FT~~~~~i~~~~-~~~~E~v~Vgkd 367 (527)
..+++. .||.+.|+|.+ .|| +...+.+.+++++. +..++++.|+.|
T Consensus 39 ~~l~~~--~Gk~vlv~F~a--twC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d 88 (187)
T 3dwv_A 39 YNLVQH--KGSPLLIYNVA--SKCGYTKGGYETATTLYNKYKSQGFTVLAFPSN 88 (187)
T ss_dssp CCGGGG--TTSCEEEEEEC--CBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBC
T ss_pred eeHHHh--CCCEEEEEEec--CCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECc
Confidence 344554 89999999988 555 88888888887753 446999999976
No 316
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=70.69 E-value=7.1 Score=31.81 Aligned_cols=44 Identities=14% Similarity=0.052 Sum_probs=33.9
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
.||.+.++|.+++ .+|+++.+.+.++++.... +.++.|.-++..
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~ 77 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELK 77 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCH
Confidence 5899999998863 6779999999999876433 788888777543
No 317
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=70.65 E-value=5.3 Score=35.57 Aligned_cols=25 Identities=16% Similarity=0.138 Sum_probs=19.1
Q ss_pred HHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 249 VIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 249 ~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.+.+++.++|.+++ +|+.+.
T Consensus 90 ~~~~L~~~~g~~tvP~ifi---~G~~ig 114 (146)
T 2ht9_A 90 FQDALYKMTGERTVPRIFV---NGTFIG 114 (146)
T ss_dssp HHHHHHHHHSCCCSCEEEE---TTEEEE
T ss_pred HHHHHHHHhCCCCcCeEEE---CCEEEe
Confidence 4466778889999999865 677663
No 318
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=70.18 E-value=4.4 Score=34.40 Aligned_cols=67 Identities=12% Similarity=0.186 Sum_probs=40.7
Q ss_pred EEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchhhHHHHHHhhcCCCceeecCCCCCCHHHH
Q 009735 171 LLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAIDPAVI 250 (527)
Q Consensus 171 lLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~~~~~F~~~~~~MPWyAVpf~~~i~~~~~ 250 (527)
..+||+.|||.|... |.++.+++. ..+.++..|.+ |.+.+ ..+..
T Consensus 27 Vvvf~~~~Cp~C~~a-lk~~L~~~~------~~~i~~~~vdi--------d~~~~--------------------~~~~~ 71 (118)
T 3c1r_A 27 IFVASKTYCPYCHAA-LNTLFEKLK------VPRSKVLVLQL--------NDMKE--------------------GADIQ 71 (118)
T ss_dssp EEEEECSSCHHHHHH-HHHHHTTSC------CCGGGEEEEEG--------GGSTT--------------------HHHHH
T ss_pred EEEEEcCCCcCHHHH-HHHHHHHcC------CCCCCeEEEEC--------ccCCC--------------------hHHHH
Confidence 456899999999854 345444432 12345556665 32210 02455
Q ss_pred HHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 251 RYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 251 r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
+.+++.++.+++|.+.+ +|+.+
T Consensus 72 ~~l~~~~g~~tvP~vfi---~g~~i 93 (118)
T 3c1r_A 72 AALYEINGQRTVPNIYI---NGKHI 93 (118)
T ss_dssp HHHHHHHSCCSSCEEEE---TTEEE
T ss_pred HHHHHHhCCCCcCEEEE---CCEEE
Confidence 67778889999998755 66665
No 319
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=70.14 E-value=9.9 Score=33.47 Aligned_cols=52 Identities=12% Similarity=0.068 Sum_probs=38.6
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhC-CceeEEEeccCCc-hhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAG-IALEMLYVGKSNP-KEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~-~~~E~v~Vgkd~~-~e~v~~~~ 377 (527)
.||.+.|+|.+. -..|+...+.+.++++..+ ..++++.|+.|.. .+.+++..
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~ 113 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFL 113 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHH
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHH
Confidence 799999999874 3566888889988877644 6899999998854 24444433
No 320
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=70.00 E-value=5.8 Score=33.19 Aligned_cols=48 Identities=6% Similarity=0.123 Sum_probs=35.1
Q ss_pred ccccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhC---CceeEEEeccCCc
Q 009735 322 TWIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAG---IALEMLYVGKSNP 369 (527)
Q Consensus 322 ~~i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~---~~~E~v~Vgkd~~ 369 (527)
..+..||.+.++|.+++ ..|+++.+.+.++++... ..+.++.|.-++.
T Consensus 29 ~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~ 80 (140)
T 2dj1_A 29 NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA 80 (140)
T ss_dssp HHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC
T ss_pred HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc
Confidence 34568999999999953 667999999998877532 2477777766543
No 321
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=69.91 E-value=6.6 Score=34.61 Aligned_cols=53 Identities=9% Similarity=0.093 Sum_probs=38.4
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCce------eEEEeccCC-chhhhhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIAL------EMLYVGKSN-PKEKARRIIS 378 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~------E~v~Vgkd~-~~e~v~~~~~ 378 (527)
.||.+.|+|.+. -..|+...+.+.++++.. +..+ +++.|+-|. ..+.+++.+.
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~ 119 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVT 119 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHH
Confidence 799999999884 244688888888887653 2236 999999987 5677666553
No 322
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=69.50 E-value=3 Score=37.97 Aligned_cols=48 Identities=19% Similarity=0.182 Sum_probs=36.8
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhh
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKAR 374 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e~v~ 374 (527)
.||.+.++|++++ ..|+.+.|.+.++++.. ..++++.|+-|...+.++
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~-~~v~~~~v~~d~~~~~~~ 101 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQ-PNIELAIISKGRAEDDLR 101 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHC-TTEEEEEECHHHHHHHTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHC-CCcEEEEEECCCCHHHHH
Confidence 6899999999953 44599999999998753 368888888775544443
No 323
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=68.72 E-value=14 Score=28.02 Aligned_cols=14 Identities=7% Similarity=0.050 Sum_probs=11.4
Q ss_pred EEEEecCCCChhHH
Q 009735 171 LLLVSDLDVSNEEL 184 (527)
Q Consensus 171 lLyfSal~~~~~~~ 184 (527)
.++|++.|||+|..
T Consensus 3 v~~f~~~~C~~C~~ 16 (81)
T 1h75_A 3 ITIYTRNDCVQCHA 16 (81)
T ss_dssp EEEEECTTCHHHHH
T ss_pred EEEEcCCCChhHHH
Confidence 35689999999984
No 324
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=67.59 E-value=6 Score=34.64 Aligned_cols=45 Identities=11% Similarity=0.120 Sum_probs=35.5
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
..||.+.++|.+++ ..|+.+.+.+.+++++.+..+.++.|.-|..
T Consensus 21 ~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~ 66 (149)
T 3gix_A 21 TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQT 66 (149)
T ss_dssp CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTC
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcC
Confidence 46999999999953 5559999999999876555688888877643
No 325
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=67.55 E-value=56 Score=28.90 Aligned_cols=95 Identities=21% Similarity=0.257 Sum_probs=50.4
Q ss_pred ccCcEEEEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEE--ec--cCCCC------CcchhhHHH-HHHhh--
Q 009735 165 LRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWL--PI--VDRST------PWTEAKEHK-FEALQ-- 231 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwI--pi--Vd~s~------~w~D~~~~~-F~~~~-- 231 (527)
=.+|.++..|++.+||.|... +..+++ . .+..|+|+ |+ ..+.. -|.-.++.+ |++++
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~-----~~~l~~----l-~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~ 81 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRL-----EHEFEK----M-TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRK 81 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHH-----HHHHTT----C-CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCChhHHHH-----HHHHhh----c-CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhC
Confidence 357899999999999999742 333431 1 34666665 55 22100 011112223 33322
Q ss_pred cCCCceeecCCCC-CCHHHHHHHHHhhCCCCCcEEEEeCCCCce
Q 009735 232 YMMPWFSVHHPSA-IDPAVIRYAKEKWDFRKKPILVVLDPQGRV 274 (527)
Q Consensus 232 ~~MPWyAVpf~~~-i~~~~~r~ike~~~~~~iP~LVvL~pqGkv 274 (527)
...|= ..++- -....-..+.+.+++++.|++++ .+|+.
T Consensus 82 g~~~~---~~~~~~~~v~~~~~la~~~gI~gtPt~vi--~nG~~ 120 (147)
T 3gv1_A 82 GKFPV---GGSICDNPVAETTSLGEQFGFNGTPTLVF--PNGRT 120 (147)
T ss_dssp CCCCT---TCCCCSCSHHHHHHHHHHTTCCSSCEEEC--TTSCE
T ss_pred CCCCC---ccHHHHHHHHHHHHHHHHhCCCccCEEEE--ECCEE
Confidence 22220 11110 01223345568999999999998 47764
No 326
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=67.53 E-value=9.4 Score=31.52 Aligned_cols=44 Identities=7% Similarity=0.005 Sum_probs=34.7
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
+.||.+.++|.+++ .+|+.+.+.+.++++.. ..+.++.|.-+..
T Consensus 21 ~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~ 65 (118)
T 2f51_A 21 EAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKN 65 (118)
T ss_dssp HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTC
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCC
Confidence 36899999998853 66799999999998765 5677888877643
No 327
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=67.45 E-value=9.9 Score=30.24 Aligned_cols=45 Identities=4% Similarity=-0.130 Sum_probs=34.5
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
..||.+.++|.+++ .+|+++.+.+.++++.. ..+.++.|.-++..
T Consensus 19 ~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~ 64 (107)
T 1gh2_A 19 AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQ 64 (107)
T ss_dssp TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSH
T ss_pred CCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECccCH
Confidence 47899999999863 66799999999998764 35777777766443
No 328
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=67.25 E-value=9 Score=33.18 Aligned_cols=43 Identities=14% Similarity=0.145 Sum_probs=35.1
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 368 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~ 368 (527)
.||.+.++|.+++ ..|+.+.+.+.+++++.+..+.++.|.-|.
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~ 65 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITE 65 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEcccc
Confidence 5899999999953 556999999999988765578888887764
No 329
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=67.13 E-value=7.8 Score=31.85 Aligned_cols=44 Identities=7% Similarity=0.006 Sum_probs=34.4
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
.||.+.++|.+++ ..|+++.+.+.++++..+. +.++.|.-+...
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~ 74 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQ 74 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCH
Confidence 7999999999953 5669999999999875333 888888777543
No 330
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=66.28 E-value=5.1 Score=43.08 Aligned_cols=64 Identities=11% Similarity=-0.011 Sum_probs=44.8
Q ss_pred HHHHHhhcCCCceeecCCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCcee----cccHHHHHHHhCCccccC
Q 009735 225 HKFEALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV----NQNALHMMWIWGSVAFPF 293 (527)
Q Consensus 225 ~~F~~~~~~MPWyAVpf~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~----~~nA~~mI~~wG~~AfPF 293 (527)
..+..-+..+||.+|++-. + ....|.++|++++.|+||+++++|++. ..+.+..+..| ..++|.
T Consensus 173 ~~~~ldl~~~~~v~v~~v~--~--~~~~l~~kfgV~~~Pslvl~~~nGk~~~~~v~~~~r~~~~~~-l~~l~~ 240 (519)
T 3t58_A 173 REVTLDLSQYHAVAVRRVL--N--TESDLVNKFGVTDFPSCYLLLRNGSVSRVPVLVESRSFYTSY-LRGLPG 240 (519)
T ss_dssp HHHHHHTTTCTTEEEEEEE--T--TCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSCSHHHHHHH-HTTSTT
T ss_pred HHHHHHhhccCCeeEEEec--C--chHHHHHHcCCCCCCeEEEEeCCCceeecccccccHHHHHHH-HHHccC
Confidence 4555667889999999854 2 224567788999999999999999864 33455555544 444444
No 331
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=66.00 E-value=6.7 Score=33.47 Aligned_cols=44 Identities=14% Similarity=0.018 Sum_probs=32.8
Q ss_pred CceEEEEEccCCh-hH-HHHHHHHHHHHHHHhC-----CceeEEEeccCCc
Q 009735 326 EQKHICLYGGEDL-EW-VRKFTALMGAVARAAG-----IALEMLYVGKSNP 369 (527)
Q Consensus 326 egK~I~LYgg~d~-~W-i~~FT~~~~~i~~~~~-----~~~E~v~Vgkd~~ 369 (527)
.||.+.|||.+.+ .. |+...+.+.++++..+ ..++++.|+.|..
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~ 72 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPE 72 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTT
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCC
Confidence 7999999998842 33 5777777888766432 4899999998853
No 332
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=65.76 E-value=4 Score=33.83 Aligned_cols=48 Identities=4% Similarity=-0.069 Sum_probs=35.8
Q ss_pred cccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCC-ceeEEEeccCCch
Q 009735 323 WIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGI-ALEMLYVGKSNPK 370 (527)
Q Consensus 323 ~i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~-~~E~v~Vgkd~~~ 370 (527)
.+..||.+.++|.+++ .+|+.+.+.+.++++.... .+.++.|.-++..
T Consensus 29 ~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~ 78 (121)
T 2j23_A 29 VTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQS 78 (121)
T ss_dssp HHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCH
T ss_pred HHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCH
Confidence 3568999999998853 6679999999998764322 3888888877543
No 333
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=65.47 E-value=26 Score=25.81 Aligned_cols=14 Identities=7% Similarity=-0.016 Sum_probs=11.2
Q ss_pred EEEEecCCCChhHH
Q 009735 171 LLLVSDLDVSNEEL 184 (527)
Q Consensus 171 lLyfSal~~~~~~~ 184 (527)
..+|++.||++|..
T Consensus 3 i~~y~~~~C~~C~~ 16 (75)
T 1r7h_A 3 ITLYTKPACVQCTA 16 (75)
T ss_dssp EEEEECTTCHHHHH
T ss_pred EEEEeCCCChHHHH
Confidence 35689999999984
No 334
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=65.45 E-value=11 Score=30.15 Aligned_cols=43 Identities=12% Similarity=-0.008 Sum_probs=33.2
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
.||.+.++|.++ -.+|+++.+.+.++++..+ .+.++.|..++.
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~ 70 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDEL 70 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTS
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccC
Confidence 488999999885 3677999999999987643 577777777654
No 335
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=65.16 E-value=4.8 Score=33.25 Aligned_cols=46 Identities=9% Similarity=-0.097 Sum_probs=35.2
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
..+|.+.++|.+++ ..|+++.+.+.++++..+..+.++.|.-+...
T Consensus 33 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 79 (130)
T 2dml_A 33 QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQ 79 (130)
T ss_dssp TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCH
T ss_pred cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCH
Confidence 47899999999842 44599999999998865556788888777543
No 336
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=64.83 E-value=11 Score=32.98 Aligned_cols=46 Identities=7% Similarity=-0.063 Sum_probs=36.5
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
++.||.+.++|.+++ ..|+.|.+.+.++++.....+.++.|.-+..
T Consensus 61 ~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~ 107 (155)
T 2ppt_A 61 ERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAH 107 (155)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTS
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCcc
Confidence 467899999999853 5569999999999887555688888877754
No 337
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=63.00 E-value=10 Score=31.83 Aligned_cols=50 Identities=14% Similarity=-0.000 Sum_probs=35.4
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccC-Cchhhhhh
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKS-NPKEKARR 375 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd-~~~e~v~~ 375 (527)
.||.+.|+|.+. -..|+...+.+.++++.. +..+.++.|+.+ ++.+.+++
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~ 79 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQ 79 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHH
Confidence 789999999873 244588999998887753 346999999854 23444444
No 338
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=66.58 E-value=1.6 Score=37.62 Aligned_cols=48 Identities=17% Similarity=0.252 Sum_probs=35.7
Q ss_pred CceEEEEEccCChhHH---HHHHHHHHH-HHHHh--CCceeEEEeccCCchhhhhh
Q 009735 326 EQKHICLYGGEDLEWV---RKFTALMGA-VARAA--GIALEMLYVGKSNPKEKARR 375 (527)
Q Consensus 326 egK~I~LYgg~d~~Wi---~~FT~~~~~-i~~~~--~~~~E~v~Vgkd~~~e~v~~ 375 (527)
.||.+.|+|.+ .|| ++..+.+.+ +++.. +..++++.|+.|...+.+++
T Consensus 32 ~gk~vll~f~a--~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~ 85 (159)
T 2ls5_A 32 RGKVVMLQFTA--SWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLA 85 (159)
Confidence 79999999998 555 777788877 65532 46899999998866555444
No 339
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=62.56 E-value=8.5 Score=32.97 Aligned_cols=48 Identities=8% Similarity=-0.012 Sum_probs=34.6
Q ss_pred CccccccCceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCC
Q 009735 319 VIPTWIMEQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSN 368 (527)
Q Consensus 319 ~I~~~i~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~ 368 (527)
.++++ .||.+.|+|.+. -..|+.-.+.+.++++.. +..++++.|+.|.
T Consensus 25 ~l~~~--~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~ 74 (169)
T 2v1m_A 25 SLEKY--RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQ 74 (169)
T ss_dssp EGGGG--TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred cHHHc--CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCc
Confidence 34444 799999999883 133477788888887653 3469999999763
No 340
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=62.44 E-value=6.6 Score=34.27 Aligned_cols=44 Identities=27% Similarity=0.417 Sum_probs=33.4
Q ss_pred cCceEEEEEc-cCC-hhHHHHHHHHH---HHHHHHhCCceeEEEeccCC
Q 009735 325 MEQKHICLYG-GED-LEWVRKFTALM---GAVARAAGIALEMLYVGKSN 368 (527)
Q Consensus 325 ~egK~I~LYg-g~d-~~Wi~~FT~~~---~~i~~~~~~~~E~v~Vgkd~ 368 (527)
..||.+.|+| |++ -.+|+.+.+.+ .++++..+..+.++.|..+.
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~ 93 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQ 93 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCS
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCcc
Confidence 3799999999 575 37779999988 77766545678888887664
No 341
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=61.30 E-value=21 Score=34.46 Aligned_cols=21 Identities=19% Similarity=0.461 Sum_probs=17.0
Q ss_pred HHHHhhCCC--CCcEEEEeCCCCc
Q 009735 252 YAKEKWDFR--KKPILVVLDPQGR 273 (527)
Q Consensus 252 ~ike~~~~~--~iP~LVvL~pqGk 273 (527)
-|.+.|+++ +.|+|+++ ++|+
T Consensus 72 ~l~~~~~V~~~~~PTl~~f-~~G~ 94 (240)
T 2qc7_A 72 ELSEKYKLDKESYPVFYLF-RDGD 94 (240)
T ss_dssp HHHHHTTCCGGGCSEEEEE-ETTC
T ss_pred HHHHHcCCCCCCCCEEEEE-eCCC
Confidence 466788999 99999999 4565
No 342
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=61.05 E-value=8.4 Score=30.84 Aligned_cols=45 Identities=16% Similarity=0.226 Sum_probs=32.9
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCch
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~ 370 (527)
.||.+.++|.+++ ..|+.+.+.+.++++.. ...+.++.|.-+...
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 66 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENS 66 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCH
Confidence 4899999999942 55599999999997752 345788888776543
No 343
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=60.17 E-value=13 Score=34.46 Aligned_cols=48 Identities=6% Similarity=-0.024 Sum_probs=37.9
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 371 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e 371 (527)
++.||.+.|+|.+.+ ..|+.+.+.+.++++..+..+.++.|.-+...+
T Consensus 27 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~ 75 (222)
T 3dxb_A 27 LKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG 75 (222)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTT
T ss_pred HhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHH
Confidence 457999999999853 556999999999988766668888888775443
No 344
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=60.15 E-value=8.6 Score=33.36 Aligned_cols=51 Identities=16% Similarity=0.081 Sum_probs=36.1
Q ss_pred CceE-EEEEcc-CC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKH-ICLYGG-ED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~-I~LYgg-~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||. +.|+|. +. -..|+...+.+.+++++. +..++++.|+.|++ +.+++..
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~-~~~~~~~ 81 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDI-NSHKRFK 81 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCH-HHHHHHH
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCH-HHHHHHH
Confidence 7887 888886 63 355688888888887653 45699999999864 4555443
No 345
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=59.96 E-value=12 Score=30.28 Aligned_cols=43 Identities=7% Similarity=-0.018 Sum_probs=32.9
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
.||.+.++|.+++ .+|+++.+.+.++++.. .+.++.|.-+...
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~ 75 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLE 75 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccH
Confidence 7899999998853 66799999999987644 6777777766443
No 346
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=59.58 E-value=11 Score=31.63 Aligned_cols=46 Identities=11% Similarity=-0.002 Sum_probs=35.5
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
+..||.+.++|.+++ ..|+++.+.+.++++.. ..+.++.|.-+...
T Consensus 34 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~d~~~ 80 (125)
T 1r26_A 34 MSEDILTVAWFTAVWCGPCKTIERPMEKIAYEF-PTVKFAKVDADNNS 80 (125)
T ss_dssp HHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHC-TTSEEEEEETTTCH
T ss_pred HccCCEEEEEEECCcCHhHHHHHHHHHHHHHHC-CCCEEEEEECCCCH
Confidence 468999999999853 66799999999998764 35777888777543
No 347
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=59.50 E-value=15 Score=30.65 Aligned_cols=44 Identities=9% Similarity=-0.005 Sum_probs=34.2
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
.||.+.++|.+++ .+|+.+.+.+.++++.. ..+.++.|.-+...
T Consensus 45 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~v~~~~~~ 89 (139)
T 3d22_A 45 DGKIVLANFSARWCGPSRQIAPYYIELSENY-PSLMFLVIDVDELS 89 (139)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCcccH
Confidence 6899999998853 66799999999998764 35778888777543
No 348
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=58.51 E-value=8.4 Score=34.08 Aligned_cols=43 Identities=7% Similarity=0.008 Sum_probs=32.7
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSN 368 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~ 368 (527)
.||.+.|+|.+. -..|++..+.+.+++++.+..++++.|+.+.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~ 75 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINAND 75 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCc
Confidence 789999999884 2445788888888877643339999999863
No 349
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=58.34 E-value=12 Score=30.20 Aligned_cols=43 Identities=5% Similarity=-0.038 Sum_probs=33.4
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCC-----ceeEEEeccC
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGI-----ALEMLYVGKS 367 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~-----~~E~v~Vgkd 367 (527)
..||.+.++|.+.+ ..|+++.+.+.++++.... .+.++.|.-+
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~ 71 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDAT 71 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETT
T ss_pred cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECc
Confidence 47899999999953 5569999999999876443 6777777665
No 350
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=58.07 E-value=26 Score=29.44 Aligned_cols=44 Identities=11% Similarity=-0.020 Sum_probs=33.7
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
.++ +.++|.++ -..|+.+.+.+.++++..+..+.++.|.-+...
T Consensus 50 ~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~ 94 (140)
T 1v98_A 50 APL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHP 94 (140)
T ss_dssp CCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH
T ss_pred CCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCH
Confidence 456 88888875 366799999999998875556888888877543
No 351
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=57.92 E-value=18 Score=29.83 Aligned_cols=42 Identities=5% Similarity=0.051 Sum_probs=32.8
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhC--CceeEEEeccC
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAG--IALEMLYVGKS 367 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~--~~~E~v~Vgkd 367 (527)
.||.+.++|.+++ .+|+++.+.+.++++... ..+.++.|.-+
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~ 68 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDAT 68 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTT
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCC
Confidence 5899999999953 667999999999987643 46777777655
No 352
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=57.19 E-value=17 Score=32.57 Aligned_cols=43 Identities=12% Similarity=0.036 Sum_probs=30.2
Q ss_pred ccCcEEEEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEec
Q 009735 165 LRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPI 212 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpi 212 (527)
-.+|.+++.|++.|||.|.... ...+++.+ +..++.+++.+|+
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~--~~l~~l~~---~~~~~v~~~~~~~ 65 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIE--PMVEDWAK---TAPQDVVLKQVPI 65 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHH--HHHHHHHH---TCCTTEEEEEEEC
T ss_pred CCCCeEEEEEECCCCccHHHhh--HHHHHHHH---HCCCCeEEEEEec
Confidence 3589999999999999998432 23344432 1233788999997
No 353
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=57.13 E-value=7.5 Score=33.43 Aligned_cols=48 Identities=8% Similarity=0.070 Sum_probs=34.5
Q ss_pred CccccccCceEEEEEccCCh-hH-HHHHHHHHHHHHHHhC----CceeEEEeccCC
Q 009735 319 VIPTWIMEQKHICLYGGEDL-EW-VRKFTALMGAVARAAG----IALEMLYVGKSN 368 (527)
Q Consensus 319 ~I~~~i~egK~I~LYgg~d~-~W-i~~FT~~~~~i~~~~~----~~~E~v~Vgkd~ 368 (527)
.++++ .||.+.|+|.+.+ .. |+...+.+.++++..+ ..++++.|+.|.
T Consensus 29 ~l~~~--~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~ 82 (172)
T 2k6v_A 29 RLSQF--QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDP 82 (172)
T ss_dssp EGGGS--TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCT
T ss_pred cHHHh--CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECC
Confidence 34444 7999999998842 33 5777778888866433 379999999774
No 354
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=56.96 E-value=7.9 Score=35.85 Aligned_cols=47 Identities=9% Similarity=0.134 Sum_probs=34.3
Q ss_pred CccccccCceE-EEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccC
Q 009735 319 VIPTWIMEQKH-ICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKS 367 (527)
Q Consensus 319 ~I~~~i~egK~-I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd 367 (527)
.++++ .||. +.|+|.+. -..|+...+.+.+++++. +..++++.|+.|
T Consensus 52 ~l~~~--~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d 101 (218)
T 3u5r_E 52 TLAEF--KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSN 101 (218)
T ss_dssp CGGGG--TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECS
T ss_pred eHHHh--CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence 34443 6885 88888873 244588888898887764 445999999996
No 355
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=56.01 E-value=17 Score=31.88 Aligned_cols=45 Identities=7% Similarity=0.005 Sum_probs=32.9
Q ss_pred ccccCcEEEEEEecCCCChhHHH--HHHHHHHHHhhhccCCCCCeEEEEEec
Q 009735 163 DVLRRKSVLLLVSDLDVSNEELF--LLEQMYRESRQLSSRTESQYEVVWLPI 212 (527)
Q Consensus 163 s~L~gK~VlLyfSal~~~~~~~~--~L~~iY~~lk~~~~~~~~~fEIVwIpi 212 (527)
..-.+|.++..|++.+||.|... .|.++.+++. ..++..++|.|+
T Consensus 23 G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~-----~~~~v~~~~~~~ 69 (175)
T 1z6m_A 23 GESNAPVKMIEFINVRCPYCRKWFEESEELLAQSV-----KSGKVERIIKLF 69 (175)
T ss_dssp SCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHH-----HTTSEEEEEEEC
T ss_pred CCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHh-----hCCcEEEEEEeC
Confidence 34578889999999999999843 4666665552 134688999876
No 356
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=56.01 E-value=12 Score=30.41 Aligned_cols=44 Identities=7% Similarity=0.103 Sum_probs=32.4
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 368 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~ 368 (527)
+..+|.+.++|.+++ .+|+.+.+.+.++++.. ..+.++.|.-+.
T Consensus 16 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~-~~v~~~~vd~~~ 60 (110)
T 2l6c_A 16 FEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARA-PQVAISSVDSEA 60 (110)
T ss_dssp HTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTC-TTSCEEEEEGGG
T ss_pred HHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHC-CCcEEEEEcCcC
Confidence 457888899998853 66799999999987653 256667766553
No 357
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=55.87 E-value=23 Score=28.25 Aligned_cols=41 Identities=10% Similarity=-0.057 Sum_probs=31.6
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKS 367 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd 367 (527)
.||.+.++|.+++ .+|+++.+.+.++++..+ .+.++.|.-+
T Consensus 23 ~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~ 64 (111)
T 2pu9_C 23 GDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCN 64 (111)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECS
T ss_pred CCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecC
Confidence 5899999999853 667999999999987633 3666777665
No 358
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=55.63 E-value=19 Score=30.30 Aligned_cols=43 Identities=16% Similarity=0.096 Sum_probs=32.2
Q ss_pred CceEEEEEccCCh-hHHHHHHHHH---HHHHHHhCCceeEEEeccCCc
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALM---GAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~---~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
.||.+.|+|.+++ .+|+++.+.+ .++++..+ .+.++.|.-+..
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~ 76 (134)
T 2fwh_A 30 KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTAN 76 (134)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTC
T ss_pred cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCC
Confidence 4899999999853 6679988887 78876543 488888877643
No 359
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=55.29 E-value=20 Score=29.70 Aligned_cols=42 Identities=10% Similarity=0.008 Sum_probs=32.9
Q ss_pred CceEEEEEccCC-------h-hHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 009735 326 EQKHICLYGGED-------L-EWVRKFTALMGAVARAAGIALEMLYVGKS 367 (527)
Q Consensus 326 egK~I~LYgg~d-------~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd 367 (527)
.||.+.++|.++ + ..|+.+.+.+.++++..+..+.++.|.-+
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~ 72 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVG 72 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECC
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECC
Confidence 389999999885 3 55599999999998765557888887764
No 360
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=54.80 E-value=15 Score=31.57 Aligned_cols=43 Identities=9% Similarity=0.020 Sum_probs=33.0
Q ss_pred CceEEEEEccCC-hhH-HHHHHHHHHHHHHHh-----CCceeEEEeccCC
Q 009735 326 EQKHICLYGGED-LEW-VRKFTALMGAVARAA-----GIALEMLYVGKSN 368 (527)
Q Consensus 326 egK~I~LYgg~d-~~W-i~~FT~~~~~i~~~~-----~~~~E~v~Vgkd~ 368 (527)
.||.+.|||.+. -.. |+...+.+.++++.. +..++++.|+.|.
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~ 74 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDP 74 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCS
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECC
Confidence 799999999883 243 677788888886643 2589999999884
No 361
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=54.65 E-value=22 Score=30.30 Aligned_cols=43 Identities=14% Similarity=0.038 Sum_probs=34.1
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCC
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSN 368 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~ 368 (527)
.||.+.|||.+. -..|+...+.+.++++.. +..+.++.|+.+.
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 84 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK 84 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH
Confidence 799999999874 245688888898887764 3689999998874
No 362
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=53.70 E-value=19 Score=35.03 Aligned_cols=22 Identities=9% Similarity=0.388 Sum_probs=17.8
Q ss_pred HHHHHhhCCC--CCcEEEEeCCCCce
Q 009735 251 RYAKEKWDFR--KKPILVVLDPQGRV 274 (527)
Q Consensus 251 r~ike~~~~~--~iP~LVvL~pqGkv 274 (527)
+-|.+.|+++ +.|+|+++- |+.
T Consensus 83 ~~la~~~~V~~~~~PTl~~F~--G~~ 106 (248)
T 2c0g_A 83 KALGDRYKVDDKNFPSIFLFK--GNA 106 (248)
T ss_dssp HHHHHHTTCCTTSCCEEEEES--SSS
T ss_pred HHHHHHhCCCcCCCCeEEEEe--CCc
Confidence 3466788999 999999996 873
No 363
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=53.61 E-value=35 Score=28.04 Aligned_cols=43 Identities=7% Similarity=-0.014 Sum_probs=32.4
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
.+|.|.++|.+++ ..|+.+.+.+.++++.. ..+..+.|.-|..
T Consensus 19 ~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~d~~ 62 (105)
T 3zzx_A 19 GNKLVVIDFYATWCGPCKMIAPKLEELSQSM-SDVVFLKVDVDEC 62 (105)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHC-TTEEEEEEETTTC
T ss_pred CCCEEEEEEECCCCCCccCCCcchhhhhhcc-CCeEEEEEecccC
Confidence 5799999999953 55699999999998753 3466666766543
No 364
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=53.20 E-value=19 Score=27.55 Aligned_cols=33 Identities=6% Similarity=0.020 Sum_probs=21.5
Q ss_pred EEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEec
Q 009735 171 LLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPI 212 (527)
Q Consensus 171 lLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpi 212 (527)
..+||..|||.|.... .+-+++ +-+|+++.|.+
T Consensus 6 v~ly~~~~Cp~C~~~~--~~L~~~-------~i~~~~~~vd~ 38 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAK--QWFEEN-------NIAFDETIIDD 38 (89)
T ss_dssp EEEEECTTCHHHHHHH--HHHHHT-------TCCCEEEECCS
T ss_pred EEEEEcCCChhHHHHH--HHHHHc-------CCCceEEEeec
Confidence 5678999999998432 222232 35699888754
No 365
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=52.97 E-value=26 Score=27.45 Aligned_cols=45 Identities=2% Similarity=-0.045 Sum_probs=33.6
Q ss_pred ceEEEEEccCC-hhHHHHHHHHHHHHHHHhC---CceeEEEeccCCchh
Q 009735 327 QKHICLYGGED-LEWVRKFTALMGAVARAAG---IALEMLYVGKSNPKE 371 (527)
Q Consensus 327 gK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~---~~~E~v~Vgkd~~~e 371 (527)
+|.+.++|.++ -..|+.+.+.+.++++... ..+.++.|..+...+
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 69 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN 69 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHH
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHh
Confidence 77888888885 3667999999999976422 468888887775443
No 366
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=52.49 E-value=16 Score=32.46 Aligned_cols=42 Identities=5% Similarity=-0.202 Sum_probs=31.7
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccC
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKS 367 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd 367 (527)
.||.+.|+|.+. -..|+.-.+.+.+++++. +..++++.|+.|
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d 91 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCN 91 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECc
Confidence 789999999883 133477778888887653 346999999876
No 367
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=52.41 E-value=17 Score=32.71 Aligned_cols=48 Identities=8% Similarity=-0.036 Sum_probs=36.4
Q ss_pred CceEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhh
Q 009735 326 EQKHICLYGG-EDLEWV---RKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRI 376 (527)
Q Consensus 326 egK~I~LYgg-~d~~Wi---~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~ 376 (527)
.||.+.|||. + .|| +...+.+.++++.. +..++++.|+.|.+ +.+++-
T Consensus 44 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~-~~~~~~ 96 (195)
T 2bmx_A 44 PGKWRVVFFWPK--DFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSE-FAHFQW 96 (195)
T ss_dssp TTCEEEEEECSC--TTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHH
T ss_pred CCCcEEEEEEcC--CCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHH
Confidence 6899999998 7 555 88888888887653 45799999999863 444443
No 368
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=51.89 E-value=5.8 Score=34.34 Aligned_cols=49 Identities=8% Similarity=-0.001 Sum_probs=34.2
Q ss_pred CceEEEEEccCChhHH----HHHHHHHHHHHHH---hCCceeEEEeccCC---chhhhhhh
Q 009735 326 EQKHICLYGGEDLEWV----RKFTALMGAVARA---AGIALEMLYVGKSN---PKEKARRI 376 (527)
Q Consensus 326 egK~I~LYgg~d~~Wi----~~FT~~~~~i~~~---~~~~~E~v~Vgkd~---~~e~v~~~ 376 (527)
.||.+.|+|.+ .|| +...+.+.++++. .+..++++.|+.|. ..+.+++.
T Consensus 32 ~gk~vll~f~~--~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~ 90 (174)
T 1xzo_A 32 KGEVWLADFIF--TNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKF 90 (174)
T ss_dssp TTCCEEEEEEC--SCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHH
T ss_pred CCCEEEEEEEc--CCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHH
Confidence 79999999988 555 6667777777553 23369999999883 33444443
No 369
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=51.56 E-value=21 Score=29.95 Aligned_cols=48 Identities=8% Similarity=0.038 Sum_probs=34.8
Q ss_pred eEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEecc--CCchhhhhhhh
Q 009735 328 KHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGK--SNPKEKARRII 377 (527)
Q Consensus 328 K~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgk--d~~~e~v~~~~ 377 (527)
|.+.|+|.+. -..|+...+.+.++++.. .++++.|+. +...+.+++.+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~ 81 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYM 81 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHH
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHH
Confidence 8888888774 366799999999998766 788899988 34444544433
No 370
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=51.43 E-value=12 Score=32.44 Aligned_cols=43 Identities=9% Similarity=-0.070 Sum_probs=34.6
Q ss_pred CceEEEEEccCC--hhHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 326 EQKHICLYGGED--LEWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 326 egK~I~LYgg~d--~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
.||.+.|+|.+. -..|+...+.+.+++++. ..++++.|+.|.+
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~ 87 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLP 87 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSG
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCH
Confidence 689999998773 345688888898887766 7899999999854
No 371
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=56.51 E-value=3.2 Score=32.39 Aligned_cols=44 Identities=9% Similarity=0.015 Sum_probs=31.7
Q ss_pred cCceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 009735 325 MEQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSN 368 (527)
Q Consensus 325 ~egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~ 368 (527)
..||.+.++|.++ -..|+++.+.+.++++..+..+.++.|.-+.
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~ 61 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDE 61 (106)
Confidence 4789999999884 2445889888888877544457777766653
No 372
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=50.39 E-value=29 Score=28.15 Aligned_cols=41 Identities=10% Similarity=-0.048 Sum_probs=31.2
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKS 367 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd 367 (527)
.||.+.++|.+++ .+|+++.+.+.++++... .+.++.|..+
T Consensus 36 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~ 77 (124)
T 1faa_A 36 GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCN 77 (124)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecC
Confidence 6899999998853 667999999999987533 4666666655
No 373
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=50.29 E-value=13 Score=31.80 Aligned_cols=51 Identities=6% Similarity=-0.128 Sum_probs=35.7
Q ss_pred Cce-EEEEEc-cCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 009735 326 EQK-HICLYG-GED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK-~I~LYg-g~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.|| .+.|+| ++. ...|+...+.+.++++.. +..++++.|+.|++ +.+++..
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~-~~~~~~~ 88 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPP-PTHKIWA 88 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCH-HHHHHHH
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCH-HHHHHHH
Confidence 677 888888 373 345588888888887653 35799999999864 4444433
No 374
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=50.04 E-value=11 Score=33.42 Aligned_cols=47 Identities=13% Similarity=-0.062 Sum_probs=33.7
Q ss_pred ccccccCceEEEEEccCCh--hHHHHHHHHHHHHHHHh---CCceeEEEeccCC
Q 009735 320 IPTWIMEQKHICLYGGEDL--EWVRKFTALMGAVARAA---GIALEMLYVGKSN 368 (527)
Q Consensus 320 I~~~i~egK~I~LYgg~d~--~Wi~~FT~~~~~i~~~~---~~~~E~v~Vgkd~ 368 (527)
++++ .||.+.|||...+ .-|+.-.+.+.+++++. +..++++.|+.|.
T Consensus 23 l~~~--~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~ 74 (170)
T 3me7_A 23 LKNL--KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDP 74 (170)
T ss_dssp GGGG--TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCT
T ss_pred hHHh--CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCC
Confidence 4454 6999999998831 23566677777776653 4779999999874
No 375
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=49.66 E-value=26 Score=32.54 Aligned_cols=52 Identities=6% Similarity=-0.097 Sum_probs=38.8
Q ss_pred CceEEEEEccC-C-hhHHHHHHHHHHHHHHH-hCCceeEEEeccCCchhhhhhhhh
Q 009735 326 EQKHICLYGGE-D-LEWVRKFTALMGAVARA-AGIALEMLYVGKSNPKEKARRIIS 378 (527)
Q Consensus 326 egK~I~LYgg~-d-~~Wi~~FT~~~~~i~~~-~~~~~E~v~Vgkd~~~e~v~~~~~ 378 (527)
.||.+.|+|.+ . ...|+.-.+.+.+++++ .+..++++.|+.|.+. ..++..+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~-~~~~~~~ 122 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQY-SHLAWDN 122 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHH-HHHHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHH-HHHHHHH
Confidence 79999999985 4 47788888888888775 3456999999998653 3344333
No 376
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=49.54 E-value=16 Score=31.07 Aligned_cols=43 Identities=7% Similarity=-0.129 Sum_probs=33.6
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHH-hCCceeEEEeccC
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARA-AGIALEMLYVGKS 367 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~-~~~~~E~v~Vgkd 367 (527)
..||.+.|+|.+.+ ..|+.+.+.+.++++. .+..++++.|+.+
T Consensus 36 ~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~ 80 (164)
T 2h30_A 36 KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASP 80 (164)
T ss_dssp CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECT
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcC
Confidence 38999999999842 5568899999988764 2456999999875
No 377
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.33 E-value=12 Score=31.54 Aligned_cols=45 Identities=7% Similarity=-0.042 Sum_probs=33.3
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhC-CceeEEEeccCCch
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAG-IALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~-~~~E~v~Vgkd~~~ 370 (527)
.++.+.++|.+++ ..|+++.+.+.+++++.+ ..+.++.|.-+...
T Consensus 25 ~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~ 71 (137)
T 2dj0_A 25 KRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYT 71 (137)
T ss_dssp TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCH
Confidence 4568899999942 445999999999987654 47888888776443
No 378
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=48.85 E-value=19 Score=31.90 Aligned_cols=42 Identities=12% Similarity=0.095 Sum_probs=30.4
Q ss_pred cccCcEEEEEEecCCCChhHHH--HHHHHHHHHhhhccCCCCCeEEEEEec
Q 009735 164 VLRRKSVLLLVSDLDVSNEELF--LLEQMYRESRQLSSRTESQYEVVWLPI 212 (527)
Q Consensus 164 ~L~gK~VlLyfSal~~~~~~~~--~L~~iY~~lk~~~~~~~~~fEIVwIpi 212 (527)
.+.+|.++.+|++.+||.|... .|.++.++. +.++.++++|+
T Consensus 22 ~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~-------~~~v~~~~~p~ 65 (193)
T 2rem_A 22 PLAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQ-------AKDVRFTLVPA 65 (193)
T ss_dssp CCTTCEEEEEEECTTCHHHHHHHHHHHHHHHTS-------CTTEEEEEEEC
T ss_pred CCCCCeEEEEEECCCChhHhhhhHHHHHHHHhc-------CCceEEEEeCc
Confidence 3468889999999999999844 454444332 34688899997
No 379
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=54.43 E-value=3.6 Score=34.10 Aligned_cols=44 Identities=9% Similarity=0.169 Sum_probs=32.5
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHH---HHHHHHhCCceeEEEeccC
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALM---GAVARAAGIALEMLYVGKS 367 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~---~~i~~~~~~~~E~v~Vgkd 367 (527)
...||.+.|||.+++ .+|+.+.+.+ .++++..+..+.++.|.-+
T Consensus 16 ~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 63 (130)
T 2lst_A 16 QAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVD 63 (130)
Confidence 458999999999942 4558898888 7777655556777777664
No 380
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=48.57 E-value=37 Score=30.15 Aligned_cols=50 Identities=14% Similarity=0.113 Sum_probs=34.5
Q ss_pred CccccccCceEEEEEcc-CC-hhHHHHHHHHHHHHHHH-hCCceeEEEeccCCch
Q 009735 319 VIPTWIMEQKHICLYGG-ED-LEWVRKFTALMGAVARA-AGIALEMLYVGKSNPK 370 (527)
Q Consensus 319 ~I~~~i~egK~I~LYgg-~d-~~Wi~~FT~~~~~i~~~-~~~~~E~v~Vgkd~~~ 370 (527)
.++++ .||++.|||. +. ...|+.=.+.+.+++++ .+..++++.|+.|.+.
T Consensus 45 ~l~d~--~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~ 97 (179)
T 3ixr_A 45 TLSDY--TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVK 97 (179)
T ss_dssp CGGGG--TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHH
T ss_pred eHHHH--CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence 34454 7998888886 63 34556556666776654 3567999999998653
No 381
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.08 E-value=33 Score=27.98 Aligned_cols=44 Identities=7% Similarity=-0.049 Sum_probs=31.7
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhC-CceeEEEeccCCch
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAG-IALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~-~~~E~v~Vgkd~~~ 370 (527)
.++ +.++|.++ -..|+++.+.+.++++... ..+.++.|.-+...
T Consensus 22 ~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~ 67 (126)
T 1x5e_A 22 EGD-WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQP 67 (126)
T ss_dssp SSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCH
T ss_pred CCC-EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCH
Confidence 455 77888775 3667999999999987533 46788888766443
No 382
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=47.81 E-value=17 Score=31.03 Aligned_cols=25 Identities=12% Similarity=0.004 Sum_probs=17.7
Q ss_pred EEEEEEecCCCChhHH--HHHHHHHHH
Q 009735 169 SVLLLVSDLDVSNEEL--FLLEQMYRE 193 (527)
Q Consensus 169 ~VlLyfSal~~~~~~~--~~L~~iY~~ 193 (527)
.++.+|++.||++|+. +.|.++=++
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e 56 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKK 56 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHh
Confidence 3578899999999993 346555433
No 383
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=47.24 E-value=16 Score=29.86 Aligned_cols=25 Identities=28% Similarity=0.323 Sum_probs=17.6
Q ss_pred HHHHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 249 VIRYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 249 ~~r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+++.++..+.|.+++ +|+.+-
T Consensus 60 ~~~~l~~~~g~~~vP~v~i---~g~~ig 84 (105)
T 2yan_A 60 VRQGLKAYSNWPTYPQLYV---KGELVG 84 (105)
T ss_dssp HHHHHHHHHTCCSSCEEEE---TTEEEE
T ss_pred HHHHHHHHHCCCCCCeEEE---CCEEEe
Confidence 4455666778899999865 577653
No 384
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=47.24 E-value=42 Score=27.30 Aligned_cols=18 Identities=22% Similarity=0.183 Sum_probs=14.9
Q ss_pred cCcEEEEEEecCCCChhH
Q 009735 166 RRKSVLLLVSDLDVSNEE 183 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~ 183 (527)
..+.++++|++.||++|.
T Consensus 14 ~~~~~v~~f~~~~C~~C~ 31 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCD 31 (100)
T ss_dssp CCCCEEEEEECSSCHHHH
T ss_pred CCCCEEEEEeCCCCcchH
Confidence 355678889999999997
No 385
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=47.20 E-value=19 Score=32.31 Aligned_cols=51 Identities=16% Similarity=-0.019 Sum_probs=36.8
Q ss_pred CceEEEEEcc-CC-hhHHHHHHHHHHHHHHH-hCCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGG-ED-LEWVRKFTALMGAVARA-AGIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg-~d-~~Wi~~FT~~~~~i~~~-~~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|+|. ++ -..|+...+.+.+++++ .+..++++.|+.|.+ +.+++.+
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~-~~~~~~~ 86 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQ-FTHLAWI 86 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHH
Confidence 7899999998 73 24557888888887665 345799999999864 3344433
No 386
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=47.03 E-value=19 Score=31.95 Aligned_cols=49 Identities=8% Similarity=-0.069 Sum_probs=35.0
Q ss_pred ccccccCceEEEEEccCC--hhHHHHHHHHHHHHHH---HhCCceeEEEeccCCch
Q 009735 320 IPTWIMEQKHICLYGGED--LEWVRKFTALMGAVAR---AAGIALEMLYVGKSNPK 370 (527)
Q Consensus 320 I~~~i~egK~I~LYgg~d--~~Wi~~FT~~~~~i~~---~~~~~~E~v~Vgkd~~~ 370 (527)
.+++ .||.+.|||+.- ..||..-++.+.++.+ +.+..+.++.||-|..+
T Consensus 27 l~d~--~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~ 80 (170)
T 4hde_A 27 TKDL--KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDL 80 (170)
T ss_dssp HHHH--TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTT
T ss_pred HHHh--CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCccc
Confidence 3454 899999999853 2688766776666644 34778999999977443
No 387
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=46.76 E-value=10 Score=33.10 Aligned_cols=45 Identities=13% Similarity=-0.042 Sum_probs=30.0
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHH---HHHHHHhCCceeEEEeccCCc
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALM---GAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~---~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
.+||.|.|+|.+.+ .+|+.+.+.+ .++++..+..+.++.|.-|..
T Consensus 45 ~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~ 93 (172)
T 3f9u_A 45 QHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNK 93 (172)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCC
T ss_pred HcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcc
Confidence 48999999999963 6668873332 334332233788888887743
No 388
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=46.44 E-value=31 Score=31.37 Aligned_cols=48 Identities=6% Similarity=-0.089 Sum_probs=37.5
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 371 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e 371 (527)
+..||.+.++|.+++ ..|+.+.+.+.++++..+..+.++.|.-+...+
T Consensus 111 ~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~ 159 (210)
T 3apq_A 111 VNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRM 159 (210)
T ss_dssp HHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHH
T ss_pred HccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHH
Confidence 458899999999853 666999999999988755568888887775443
No 389
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=46.06 E-value=56 Score=26.75 Aligned_cols=45 Identities=4% Similarity=-0.050 Sum_probs=34.2
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHH-----hCCceeEEEeccCCch
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARA-----AGIALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~-----~~~~~E~v~Vgkd~~~ 370 (527)
.+|.+.++|.+.+ ..|+.+.+.+.++++. .+..+.++.|.-+..+
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~ 82 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP 82 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH
Confidence 6899999999953 5569999999999763 2356888888777543
No 390
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=45.23 E-value=12 Score=33.59 Aligned_cols=54 Identities=7% Similarity=-0.071 Sum_probs=38.0
Q ss_pred CceEEEEEcc-CC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhhhhh
Q 009735 326 EQKHICLYGG-ED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRIISTI 380 (527)
Q Consensus 326 egK~I~LYgg-~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~~~i 380 (527)
.||.+.|+|. +. -..|+...+.+.++++.. +..++++.|+.|.+ +.+++-.+.+
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~-~~~~~~~~~~ 88 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSE-QVHFAWKNTP 88 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHHTSC
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCH-HHHHHHHHhh
Confidence 6899999998 72 233478888888886642 34799999999864 4555544443
No 391
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=45.14 E-value=35 Score=29.35 Aligned_cols=43 Identities=5% Similarity=0.025 Sum_probs=33.3
Q ss_pred ceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 327 QKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 327 gK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
||.+.++|.+++ .+|+++.+.+.++++.. ..+.++.|.-+...
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~~~ 75 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEGVP 75 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSH
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCCCH
Confidence 899999999853 66799999999998763 35777777766543
No 392
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=44.81 E-value=14 Score=32.73 Aligned_cols=42 Identities=7% Similarity=-0.061 Sum_probs=33.1
Q ss_pred CceEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeEEEeccCCc
Q 009735 326 EQKHICLYGG-EDLEWV---RKFTALMGAVARAA-GIALEMLYVGKSNP 369 (527)
Q Consensus 326 egK~I~LYgg-~d~~Wi---~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~ 369 (527)
.||.+.|||. + .|| +...+.+.++++.. +..++++.|+.|.+
T Consensus 30 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~ 76 (187)
T 1we0_A 30 KGKWSIVVFYPA--DFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTH 76 (187)
T ss_dssp SSSEEEEEECSC--TTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCH
T ss_pred CCCCEEEEEECC--CCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCH
Confidence 7899999998 7 565 77888888886643 34799999999864
No 393
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=44.79 E-value=26 Score=31.21 Aligned_cols=40 Identities=13% Similarity=-0.136 Sum_probs=30.6
Q ss_pred cCcEEEEEEecCCCChhH--HHHHHHHHHHHhhhccCCCCCeEEEEEec
Q 009735 166 RRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPI 212 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~--~~~L~~iY~~lk~~~~~~~~~fEIVwIpi 212 (527)
.+|.++.+|++.+||.|. .+.|.++.++. +.++.+..+|+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~-------~~~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKAL-------PSDAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHS-------CTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHC-------CCceEEEEecc
Confidence 578899999999999998 44676666554 23688888887
No 394
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=44.77 E-value=6.5 Score=38.30 Aligned_cols=12 Identities=33% Similarity=1.018 Sum_probs=7.9
Q ss_pred ceeecCCCCccc
Q 009735 505 EKVVCAECGRRM 516 (527)
Q Consensus 505 ~~i~CpeC~R~M 516 (527)
+.+.||+|||.+
T Consensus 221 ~Iv~Cp~CgRIL 232 (256)
T 3na7_A 221 DMITCPYCGRIL 232 (256)
T ss_dssp SCEECTTTCCEE
T ss_pred CEEECCCCCeeE
Confidence 347777777754
No 395
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=44.65 E-value=28 Score=32.17 Aligned_cols=44 Identities=11% Similarity=-0.023 Sum_probs=34.0
Q ss_pred ccccccCceEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeEEEeccC
Q 009735 320 IPTWIMEQKHICLYGGEDLEWV---RKFTALMGAVARAA-GIALEMLYVGKS 367 (527)
Q Consensus 320 I~~~i~egK~I~LYgg~d~~Wi---~~FT~~~~~i~~~~-~~~~E~v~Vgkd 367 (527)
++++ .||.+.|+|.+ .|| ++-.+.+.+++++. +..++++.|+.|
T Consensus 42 l~~~--~Gk~vlv~Fwa--twC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 42 LGSL--RGKVLLIENVA--SLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp GGGG--TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred HHHc--CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 3444 79999999998 565 77778888887753 346999999876
No 396
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=43.88 E-value=26 Score=31.68 Aligned_cols=51 Identities=12% Similarity=-0.005 Sum_probs=36.7
Q ss_pred CceEEEEEcc-CC-hhHHHHHHHHHHHHHHH-hCCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGG-ED-LEWVRKFTALMGAVARA-AGIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg-~d-~~Wi~~FT~~~~~i~~~-~~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|+|. ++ -.-|+...+.+.+++++ .+..++++.|+.|.+ +.+++-.
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~-~~~~~~~ 88 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSE-YSHLAWT 88 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHH
Confidence 6899999998 73 34557777888887665 345799999999864 3344433
No 397
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=42.90 E-value=19 Score=31.79 Aligned_cols=43 Identities=5% Similarity=0.041 Sum_probs=31.6
Q ss_pred Cce-EEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCC
Q 009735 326 EQK-HICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSN 368 (527)
Q Consensus 326 egK-~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~ 368 (527)
.|| .+.|+|.+. -..|+...+.+.+++++. +..++++.|+.|.
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~ 89 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSND 89 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSC
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCc
Confidence 677 488888873 245588888888887653 3469999999863
No 398
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=42.74 E-value=41 Score=28.67 Aligned_cols=55 Identities=9% Similarity=0.029 Sum_probs=37.4
Q ss_pred ccccccCceEEEEEccC-C-hhHHHHHHHHHHHHHHH-hCCceeEEEeccCCchhhhhhhh
Q 009735 320 IPTWIMEQKHICLYGGE-D-LEWVRKFTALMGAVARA-AGIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 320 I~~~i~egK~I~LYgg~-d-~~Wi~~FT~~~~~i~~~-~~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
++++ .||.+.|||.. . ...|+.-.+.+.+++++ .+..++++.|+.|++ +.+++..
T Consensus 30 l~~~--~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~-~~~~~~~ 87 (163)
T 3gkn_A 30 LRAH--AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSV-KSHDNFC 87 (163)
T ss_dssp SGGG--TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCH-HHHHHHH
T ss_pred HHHh--CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHH
Confidence 4444 78888888864 3 46677777788777664 345689999999844 4444433
No 399
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=42.59 E-value=31 Score=35.13 Aligned_cols=42 Identities=10% Similarity=-0.128 Sum_probs=32.9
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccC
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAA-GIALEMLYVGKS 367 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd 367 (527)
.||.+.|+|.+. ...|+...+.+.++++.. +..++++.|+.+
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d 124 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTP 124 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 799999999884 244588888898887753 346999999865
No 400
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=42.49 E-value=22 Score=33.34 Aligned_cols=50 Identities=12% Similarity=-0.002 Sum_probs=36.1
Q ss_pred CceEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhhh
Q 009735 326 EQKHICLYGG-EDLEWV---RKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRIIS 378 (527)
Q Consensus 326 egK~I~LYgg-~d~~Wi---~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~~ 378 (527)
.||.+.|||. + .|| +.-.+.+.+++++. +..++++.|+.|.+. .+++-.+
T Consensus 55 ~Gk~vvl~F~pa--twCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~-~~~~~~~ 109 (221)
T 2c0d_A 55 GQKYCCLLFYPL--NYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVY-SHLAWKN 109 (221)
T ss_dssp TTCEEEEEECCC--CTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHH-HHHHHHH
T ss_pred CCCeEEEEEEcC--CCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHH
Confidence 6899999998 7 565 77777787776542 357999999998653 3444443
No 401
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=41.48 E-value=29 Score=31.99 Aligned_cols=53 Identities=13% Similarity=-0.006 Sum_probs=36.2
Q ss_pred CceEEEEEcc-CC-hhHHHHHHHHHHHHHHH-hCCceeEEEeccCCchhhhhhhhhh
Q 009735 326 EQKHICLYGG-ED-LEWVRKFTALMGAVARA-AGIALEMLYVGKSNPKEKARRIIST 379 (527)
Q Consensus 326 egK~I~LYgg-~d-~~Wi~~FT~~~~~i~~~-~~~~~E~v~Vgkd~~~e~v~~~~~~ 379 (527)
.||.+.|||. +. -.-|+.-.+.+.+++++ .+..++++.|+.|.+. .+++-.+.
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~-~~~~~~~~ 102 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQF-THLAWINT 102 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHH-HHHHHHTS
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHH-HHHHHHHH
Confidence 7899999998 73 23446666677777654 3468999999998653 44444433
No 402
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=41.46 E-value=18 Score=32.58 Aligned_cols=44 Identities=11% Similarity=-0.071 Sum_probs=31.2
Q ss_pred cCceEEEEEccCC-hhHHHHHHHHH---HHHHHHhCCceeEEEeccCC
Q 009735 325 MEQKHICLYGGED-LEWVRKFTALM---GAVARAAGIALEMLYVGKSN 368 (527)
Q Consensus 325 ~egK~I~LYgg~d-~~Wi~~FT~~~---~~i~~~~~~~~E~v~Vgkd~ 368 (527)
++||.|+||++++ -.||+.|.... .+|++..+.+|=.+.+-.++
T Consensus 40 ~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~ 87 (153)
T 2dlx_A 40 MQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDS 87 (153)
T ss_dssp HHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSS
T ss_pred HcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCC
Confidence 4799999999997 48889886643 45554444477777776654
No 403
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=41.05 E-value=15 Score=34.79 Aligned_cols=45 Identities=7% Similarity=0.053 Sum_probs=35.6
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
.||.|.++|.+.+ ..|+.+.+.+.++++..+..+.++.|.-+...
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~ 70 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQ 70 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCH
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCH
Confidence 4899999999942 44599999999998876667888888877543
No 404
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=40.50 E-value=7.5 Score=31.01 Aligned_cols=45 Identities=7% Similarity=-0.031 Sum_probs=32.6
Q ss_pred cccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhC---CceeEEEeccC
Q 009735 323 WIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAG---IALEMLYVGKS 367 (527)
Q Consensus 323 ~i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~---~~~E~v~Vgkd 367 (527)
.+..||.+.++|.+++ .+|+++.+.+.++++... ..+.++.|..+
T Consensus 20 ~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~ 68 (120)
T 1mek_A 20 ALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDAT 68 (120)
T ss_dssp HHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETT
T ss_pred HHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCC
Confidence 3568899999999852 556999999999877532 45666666655
No 405
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=39.82 E-value=19 Score=32.23 Aligned_cols=51 Identities=12% Similarity=-0.092 Sum_probs=35.7
Q ss_pred CceEEEEEcc-CC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGG-ED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg-~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|+|. ++ -..|+...+.+.+++++. +..++++.|+.|.+ +.+++-.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~-~~~~~~~ 83 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSK-FTHLAWK 83 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCH-HHHHHHH
Confidence 6899999998 73 234477778887776642 35799999999864 3444433
No 406
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=39.64 E-value=32 Score=31.12 Aligned_cols=43 Identities=19% Similarity=0.117 Sum_probs=31.4
Q ss_pred CceEEEEEccCCh-hH-HHHHHHHHHHHHHHh----CCceeEEEeccCC
Q 009735 326 EQKHICLYGGEDL-EW-VRKFTALMGAVARAA----GIALEMLYVGKSN 368 (527)
Q Consensus 326 egK~I~LYgg~d~-~W-i~~FT~~~~~i~~~~----~~~~E~v~Vgkd~ 368 (527)
.||.+.|+|.+.+ .- |+...+.+.++++.. +..++++.|+.|.
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 7999999998832 32 567777777765432 4589999999884
No 407
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=39.46 E-value=26 Score=32.36 Aligned_cols=51 Identities=14% Similarity=-0.076 Sum_probs=36.5
Q ss_pred CceEEEEEcc-CC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGG-ED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg-~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|||. ++ -.-|+.-.+.+.+++++. +..++++.|+.|.+ +.+++-.
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~ 104 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSK-YTHLAWK 104 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHH
Confidence 6899999998 74 245577777888876643 45799999999865 3444433
No 408
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=39.33 E-value=15 Score=33.83 Aligned_cols=44 Identities=20% Similarity=0.176 Sum_probs=31.1
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHH---HHHHHHHhCCceeEEEeccC
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTAL---MGAVARAAGIALEMLYVGKS 367 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~---~~~i~~~~~~~~E~v~Vgkd 367 (527)
.++||.|+|.|++++ .||+.+.+. ..++++..+..|-.+-|..+
T Consensus 36 ~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~d 83 (173)
T 3ira_A 36 RKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDRE 83 (173)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETT
T ss_pred HHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCc
Confidence 458999999999985 888988773 24555544446666666555
No 409
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=39.15 E-value=8.7 Score=31.47 Aligned_cols=43 Identities=12% Similarity=-0.014 Sum_probs=32.5
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 326 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 326 egK~I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
.||.+.+||.++ -.+|+++.+.+.++++... .+.++.|.-++.
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~ 78 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDEL 78 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTS
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccch
Confidence 589999999884 2555899999999977643 577777777654
No 410
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=38.85 E-value=7.1 Score=34.64 Aligned_cols=45 Identities=2% Similarity=0.022 Sum_probs=31.8
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 368 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~ 368 (527)
...||.+.|+|.+++ .+|+.+.+.+.++++..+..+.++.|.-+.
T Consensus 43 ~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~ 88 (164)
T 1sen_A 43 AASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLED 88 (164)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEG
T ss_pred HhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecC
Confidence 458999999999963 667999998888755333345566665553
No 411
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=38.84 E-value=26 Score=29.61 Aligned_cols=41 Identities=7% Similarity=-0.001 Sum_probs=29.2
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 368 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~ 368 (527)
.||.+.++|.+++ .+|+.+.+.+.++++.. .+.++.|.-+.
T Consensus 39 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~ 80 (133)
T 3cxg_A 39 QNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDI 80 (133)
T ss_dssp CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccc
Confidence 5889999999953 66689988888876532 45566665553
No 412
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=38.63 E-value=29 Score=29.88 Aligned_cols=40 Identities=20% Similarity=0.407 Sum_probs=22.2
Q ss_pred HHHhhhhcCCCCCccc--eecCCC--CCCCCceeecCCCCcccc
Q 009735 478 MNDYLNENRTPYHCNR--LILPGE--AGRIPEKVVCAECGRRME 517 (527)
Q Consensus 478 f~~y~~~~~~~~~C~~--~~~p~~--~g~ip~~i~CpeC~R~ME 517 (527)
++.-|...++.+.+.. +.+=|. +..--....||+|+|.+-
T Consensus 38 l~~r~p~~k~y~~~~~~~lDIfG~~~~~~~s~~~~C~nC~R~va 81 (99)
T 3mhs_C 38 LKTRYPDLRSYYFDPNGSLDINGLQKQQESSQYIHCENCGRDVS 81 (99)
T ss_dssp HHHHCTTCCCCCCCTTSCSCTTSCCCCCTTSCEEECTTTCCEEE
T ss_pred HhccCCCCCCceecCCCCcccCCCcCcccCCCeEECCCCCCCch
Confidence 4444444455555543 222121 114556899999999874
No 413
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=38.37 E-value=7.2 Score=32.73 Aligned_cols=46 Identities=7% Similarity=-0.016 Sum_probs=30.7
Q ss_pred ccCceEEEEEccCCh-h--------------HHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 324 IMEQKHICLYGGEDL-E--------------WVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~--------------Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
++.||.+.++|.+++ . .|+.+.+.+.++++..+..+.++.|.-|..
T Consensus 18 ~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~ 78 (123)
T 1oaz_A 18 LKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQN 78 (123)
T ss_dssp TSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSC
T ss_pred HhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCC
Confidence 358999999999964 6 677888988888765444577777776643
No 414
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=38.13 E-value=19 Score=31.74 Aligned_cols=43 Identities=19% Similarity=0.022 Sum_probs=34.0
Q ss_pred CceEEEEEccCC--hhHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 009735 326 EQKHICLYGGED--LEWVRKFTALMGAVARAAGIALEMLYVGKSNPK 370 (527)
Q Consensus 326 egK~I~LYgg~d--~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~ 370 (527)
.||.+.|+|.+. ...|+.-.+.+.+++++ ..++++.|+.|.+.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~ 87 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPF 87 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHH
Confidence 789999999872 23458888899998776 67999999998653
No 415
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=38.03 E-value=11 Score=31.40 Aligned_cols=23 Identities=17% Similarity=0.697 Sum_probs=18.4
Q ss_pred CCCceeecCCCCccccee-----eeeec
Q 009735 502 RIPEKVVCAECGRRMEEF-----IMYRC 524 (527)
Q Consensus 502 ~ip~~i~CpeC~R~ME~~-----v~YkC 524 (527)
+++...-||+||+++|+- ++|-|
T Consensus 27 ~~~~~afCPeCgq~Le~lkACGA~~yFC 54 (81)
T 2jrp_A 27 DFSLQALCPDCRQPLQVLKACGAVDYFC 54 (81)
T ss_dssp EEEEEEECSSSCSCCCEEEETTEEEECC
T ss_pred cCCCcccCcchhhHHHHHHhcCCcCeee
Confidence 566677999999999995 66665
No 416
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=37.89 E-value=7.2 Score=39.11 Aligned_cols=36 Identities=6% Similarity=-0.052 Sum_probs=24.6
Q ss_pred ceeecccccCcEEEEEEecCCCChhHHHHHHHHHHHHh
Q 009735 158 RKVSIDVLRRKSVLLLVSDLDVSNEELFLLEQMYRESR 195 (527)
Q Consensus 158 ~kV~Is~L~gK~VlLyfSal~~~~~~~~~L~~iY~~lk 195 (527)
.+..+...-++...+.|.|.||++|.. +..+++++.
T Consensus 188 ~~~~la~~l~~~~vV~F~A~WC~~Ck~--l~p~le~lA 223 (291)
T 3kp9_A 188 LAVGLAAHLRQIGGTMYGAYWCPHCQD--QKELFGAAF 223 (291)
T ss_dssp THHHHHHHHHHTTCEEEECTTCHHHHH--HHHHHGGGG
T ss_pred HHHHHHHHhCCCCEEEEECCCCHHHHH--HHHHHHHHH
Confidence 445555544555568899999999974 456667663
No 417
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=37.76 E-value=25 Score=27.44 Aligned_cols=23 Identities=13% Similarity=0.080 Sum_probs=15.1
Q ss_pred HHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 251 RYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 251 r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.+++.+.|.+++ +|+.+.
T Consensus 46 ~~l~~~~~~~~vP~l~~---~g~~i~ 68 (92)
T 2khp_A 46 AEMQERSGRNTFPQIFI---GSVHVG 68 (92)
T ss_dssp HHHHHHHTSSCCCEEEE---TTEEEE
T ss_pred HHHHHHhCCCCcCEEEE---CCEEEc
Confidence 44556668889997644 566654
No 418
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=36.48 E-value=79 Score=25.74 Aligned_cols=25 Identities=12% Similarity=0.145 Sum_probs=17.6
Q ss_pred HHHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 248 AVIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 248 ~~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
+....+++..+....|.+.+ +|+.+
T Consensus 60 ~~~~~l~~~~g~~tvP~ifi---~g~~i 84 (113)
T 3rhb_A 60 QLQKVLERLTGQHTVPNVFV---CGKHI 84 (113)
T ss_dssp HHHHHHHHHHSCCSSCEEEE---TTEEE
T ss_pred HHHHHHHHHhCCCCcCEEEE---CCEEE
Confidence 34456666778888999865 67665
No 419
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=36.24 E-value=24 Score=32.34 Aligned_cols=48 Identities=13% Similarity=0.052 Sum_probs=35.1
Q ss_pred CccccccCceEEEEEcc-C-ChhHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 319 VIPTWIMEQKHICLYGG-E-DLEWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 319 ~I~~~i~egK~I~LYgg-~-d~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
.++++ .||.+.|+|. + ....|+.=.+.+.+++++. ..++++.|+.|.+
T Consensus 72 ~L~d~--~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~ 121 (200)
T 3zrd_A 72 ALSSF--AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLP 121 (200)
T ss_dssp EGGGG--TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCH
T ss_pred cHHHh--CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCH
Confidence 34454 7999999886 4 2345566677888887755 6799999999865
No 420
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=36.19 E-value=29 Score=30.18 Aligned_cols=48 Identities=13% Similarity=0.018 Sum_probs=33.6
Q ss_pred CccccccCceEEEEEcc-C-ChhHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 319 VIPTWIMEQKHICLYGG-E-DLEWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 319 ~I~~~i~egK~I~LYgg-~-d~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
.++++ .||.+.|||. + ....|+.=.+.+.+++++. ..++++.|+.|.+
T Consensus 37 ~l~~~--~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~ 86 (165)
T 1q98_A 37 ALNDF--ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLP 86 (165)
T ss_dssp EGGGG--TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCH
T ss_pred ehHHh--CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCH
Confidence 34454 7899999885 4 2344455566777776655 6899999999865
No 421
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=36.03 E-value=47 Score=28.86 Aligned_cols=52 Identities=10% Similarity=0.026 Sum_probs=35.3
Q ss_pred ccccccCceEEEEEcc-C-ChhHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhh
Q 009735 320 IPTWIMEQKHICLYGG-E-DLEWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARR 375 (527)
Q Consensus 320 I~~~i~egK~I~LYgg-~-d~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e~v~~ 375 (527)
++++ .||.+.|+|- + .-..|+.-.+.+.+++++. ..++++.|+.|.+ +.+++
T Consensus 42 l~~~--~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~-~~~~~ 95 (171)
T 2yzh_A 42 VGGA--KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLP-FAQKR 95 (171)
T ss_dssp ESSC--CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCH-HHHHH
T ss_pred HHHh--CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCH-HHHHH
Confidence 3444 6888888873 4 3455666677777776554 6899999999865 34444
No 422
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=35.86 E-value=37 Score=31.44 Aligned_cols=51 Identities=14% Similarity=-0.037 Sum_probs=35.9
Q ss_pred CceEEEEEcc-CC-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 009735 326 EQKHICLYGG-ED-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 377 (527)
Q Consensus 326 egK~I~LYgg-~d-~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~~~ 377 (527)
.||.+.|+|. ++ -..|+.-.+.+.+++++. +..++++.|+.|.+ +.+++-.
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~ 108 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSH-FSHLAWI 108 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCH-HHHHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHH
Confidence 6899999998 73 234477788888876642 45799999999864 3344333
No 423
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=34.93 E-value=73 Score=26.83 Aligned_cols=41 Identities=5% Similarity=-0.084 Sum_probs=30.3
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKS 367 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd 367 (527)
.||.+.+||.+++ ..|+.+.+.+.+++++. ..+-++.|..+
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~-~~v~~~~vd~~ 70 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKF-PETKFVKAIVN 70 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHC-SSEEEEEECCS
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHC-CCcEEEEEEhh
Confidence 5689999999953 55699999999998753 34555666554
No 424
>3hvm_A Agmatine deiminase; hydrolase; 2.10A {Helicobacter pylori} SCOP: d.126.1.6 PDB: 2cmu_A
Probab=34.92 E-value=39 Score=34.63 Aligned_cols=108 Identities=15% Similarity=0.202 Sum_probs=65.0
Q ss_pred ccCcEEEEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcc-hhh--HHHHHHh-hcCCCceeec
Q 009735 165 LRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWT-EAK--EHKFEAL-QYMMPWFSVH 240 (527)
Q Consensus 165 L~gK~VlLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~-D~~--~~~F~~~-~~~MPWyAVp 240 (527)
+-+..+.||-...+........|.++|+.|+..-...+..|||+=+|+-++- .. +.+ -.++-++ ... -=.-||
T Consensus 209 Fv~p~~v~~~~~~d~~d~~y~~~~~~~~~L~~~~da~Gr~~~i~~lp~P~~~--~~~~g~rl~aSY~Nfli~N-g~VivP 285 (330)
T 3hvm_A 209 FLDKDTIVYSACEDKNDEHYTALKKMQEELKTFKKLDKTPYKLIPLEIPKAI--FDENQQRLPATYVNFLLCN-DALIVP 285 (330)
T ss_dssp EEETTEEEEEECCCTTSTTHHHHHHHHHHHHHCBCTTSCBCEEEEEECCSCC--BCTTCCBCCCCTTCCEEET-TEEEEE
T ss_pred ecCCCEEEEEcCCCCCCccHHHHHHHHHHHHhhhhccCCceEEEEeCCCCcc--ccCCCCCcccchhheeeEC-CEEEEe
Confidence 4455666666666544444678999999998654456889999999983311 10 100 0111111 000 001133
Q ss_pred -CCCCCCHHHHHHHHHhhCCCCCcEEEEeCCCCceecccHHHHHHHhCC
Q 009735 241 -HPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGS 288 (527)
Q Consensus 241 -f~~~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~ 288 (527)
|.+.-|..+.+.|++.| |+ +|+--|+..+++..|+
T Consensus 286 ~fgd~~D~~A~~~l~~~f------------P~-~Vv~i~~~~i~~~gG~ 321 (330)
T 3hvm_A 286 TYNDPKDALILETLKQHT------------PL-EVIGVDCNTLIKQHGS 321 (330)
T ss_dssp ECSCTTHHHHHHHHHTTC------------SS-EEEEEECHHHHHTTCC
T ss_pred cCCChHHHHHHHHHHHhC------------CC-CEEEEEhHHHHhCCCc
Confidence 44444677888887766 57 8888888888887774
No 425
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=34.75 E-value=18 Score=31.24 Aligned_cols=23 Identities=26% Similarity=0.716 Sum_probs=15.1
Q ss_pred CCCceeecCCCCccccee-----eeeec
Q 009735 502 RIPEKVVCAECGRRMEEF-----IMYRC 524 (527)
Q Consensus 502 ~ip~~i~CpeC~R~ME~~-----v~YkC 524 (527)
.+....-||+|+.++|+. +.|-|
T Consensus 57 ~f~~~a~CPdC~q~LevLkACGAvdYFC 84 (101)
T 2jne_A 57 FIEMKALCPDCHQPLQVLKACGAVDYFC 84 (101)
T ss_dssp EEEEEEECTTTCSBCEEEEETTEEEEEE
T ss_pred hhhccccCcchhhHHHHHHHhcCcchhh
Confidence 455566677777777774 66665
No 426
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=34.70 E-value=54 Score=28.25 Aligned_cols=47 Identities=15% Similarity=0.039 Sum_probs=33.1
Q ss_pred ccccccCceEEEEEcc-C-ChhHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 320 IPTWIMEQKHICLYGG-E-DLEWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 320 I~~~i~egK~I~LYgg-~-d~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
++++ .||.+.|||. . ...-|+.-.+.+.+++++. ..++++.|+.|.+
T Consensus 37 l~~~--~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~ 85 (163)
T 1psq_A 37 LADF--DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLP 85 (163)
T ss_dssp GGGG--TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCH
T ss_pred HHHh--CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCH
Confidence 4444 7999999996 3 2345566666677765544 6899999999864
No 427
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=33.96 E-value=34 Score=28.18 Aligned_cols=24 Identities=29% Similarity=0.303 Sum_probs=14.7
Q ss_pred HHHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 249 VIRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 249 ~~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
..+.+++..+....|.+++ +|+.+
T Consensus 58 ~~~~l~~~~g~~~vP~ifi---~g~~i 81 (109)
T 1wik_A 58 VRQGLKTFSNWPTYPQLYV---RGDLV 81 (109)
T ss_dssp HHHHHHHHHSCCSSCEEEC---SSSEE
T ss_pred HHHHHHHHhCCCCCCEEEE---CCEEE
Confidence 3445555567778888653 56655
No 428
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=33.56 E-value=37 Score=25.27 Aligned_cols=39 Identities=3% Similarity=-0.076 Sum_probs=27.9
Q ss_pred EEEccC-ChhHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 331 CLYGGE-DLEWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 331 ~LYgg~-d~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
.++|++ .-.+|+++.+.+.+++++.+..+.++.|.-+..
T Consensus 5 vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~ 44 (85)
T 1nho_A 5 IEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVD 44 (85)
T ss_dssp EEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTC
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCC
Confidence 345555 345669999999999876666788888877644
No 429
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=33.45 E-value=26 Score=28.71 Aligned_cols=43 Identities=12% Similarity=0.035 Sum_probs=31.2
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHH---HHHHHHhCCceeEEEeccC
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALM---GAVARAAGIALEMLYVGKS 367 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~---~~i~~~~~~~~E~v~Vgkd 367 (527)
..||.+.|+|.+.+ .+|+.+.+.+ .++++..+..+..+.|..+
T Consensus 25 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 71 (130)
T 2kuc_A 25 VEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDME 71 (130)
T ss_dssp HHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSS
T ss_pred hcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecC
Confidence 37899999999853 6679999888 6666544556666666655
No 430
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=33.13 E-value=46 Score=30.74 Aligned_cols=43 Identities=19% Similarity=0.220 Sum_probs=35.1
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 009735 326 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 368 (527)
Q Consensus 326 egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~ 368 (527)
.+|-|.+-|++++ ..|+...+.+.+++++.+....++.|--|.
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe 83 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITE 83 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCC
Confidence 6789999999953 446999999999998766667888887773
No 431
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=33.06 E-value=68 Score=28.98 Aligned_cols=42 Identities=7% Similarity=-0.054 Sum_probs=30.4
Q ss_pred cCcEEEEEEecCCCChhHHHHHHHHHHHHhhhccCCCCCeEEEEEec
Q 009735 166 RRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPI 212 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpi 212 (527)
.+|.+++.|++.|||.|... ...++++.+ +..+++.+..+|+
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~--~~~l~~~~~---~~~~~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHL--EPVLSKHAK---SFKDDMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHH--HHHHHHHHT---TCCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHH--HHHHHHHHH---HCCCCeEEEEecC
Confidence 47999999999999999854 244556542 2234688888887
No 432
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=31.71 E-value=24 Score=32.62 Aligned_cols=55 Identities=22% Similarity=0.318 Sum_probs=32.5
Q ss_pred cchhhHHHHHhhhcccCCCCCCCcHHHHHHHhhhhcCCCCCccceecCCCCCCCCceeecCCCCcccceeeee
Q 009735 450 AKDETILKCLTEYTTWEPNVPEKSFVVAMNDYLNENRTPYHCNRLILPGEAGRIPEKVVCAECGRRMEEFIMY 522 (527)
Q Consensus 450 g~G~~~~~~l~~f~~Wk~~v~~kgF~~Af~~y~~~~~~~~~C~~~~~p~~~g~ip~~i~CpeC~R~ME~~v~Y 522 (527)
.|++...+.|...+..++. ++ ..+|. =.-|.+.-. |..|+ +||-||.+-+.|..+
T Consensus 115 ~H~~~~~~~l~~l~~~~~~--~~------~~~~~----C~~CG~i~~----~~~p~--~CP~Cg~~~~~F~~~ 169 (170)
T 3pwf_A 115 IHAELYRKAKEKAEKGEDI--EI------KKVYI----CPICGYTAV----DEAPE--YCPVCGAPKEKFVVF 169 (170)
T ss_dssp HHHHHHHHHHHHHTTTCCC--CC------SCEEE----CTTTCCEEE----SCCCS--BCTTTCCBGGGCEEE
T ss_pred HHHHHHHHHHHHHhcCCcC--CC------CCeeE----eCCCCCeeC----CCCCC--CCCCCCCCHHHceec
Confidence 4777666666666654431 00 00111 223666432 56888 999999999988654
No 433
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=31.43 E-value=31 Score=25.99 Aligned_cols=23 Identities=4% Similarity=0.099 Sum_probs=16.0
Q ss_pred HHHHHhhCCCCCcEEEEeCCCCceec
Q 009735 251 RYAKEKWDFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 251 r~ike~~~~~~iP~LVvL~pqGkv~~ 276 (527)
..+.+.+++.+.|.+++ +|+.+.
T Consensus 41 ~~~~~~~~~~~vP~l~~---~g~~i~ 63 (82)
T 1fov_A 41 EEMIKRSGRTTVPQIFI---DAQHIG 63 (82)
T ss_dssp HHHHHHHSSCCSCEEEE---TTEEEE
T ss_pred HHHHHHhCCCCcCEEEE---CCEEEe
Confidence 34455668889999865 677663
No 434
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=31.33 E-value=43 Score=29.03 Aligned_cols=51 Identities=14% Similarity=0.047 Sum_probs=33.7
Q ss_pred ccccccCceEEEEEcc-C-ChhHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhh
Q 009735 320 IPTWIMEQKHICLYGG-E-DLEWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARR 375 (527)
Q Consensus 320 I~~~i~egK~I~LYgg-~-d~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e~v~~ 375 (527)
++++ .||.+.|+|. + ....|+.=.+.+.+++++ ..++++.|+.|.+. .+++
T Consensus 41 l~~~--~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~-~~~~ 93 (166)
T 3p7x_A 41 LADY--AGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPF-AQKR 93 (166)
T ss_dssp GGGG--TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHH-HHHH
T ss_pred HHHh--CCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHH-HHHH
Confidence 4454 7898888886 4 235566556666666554 67999999988653 3444
No 435
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=31.21 E-value=37 Score=33.20 Aligned_cols=43 Identities=7% Similarity=-0.065 Sum_probs=34.5
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 009735 325 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKS 367 (527)
Q Consensus 325 ~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd 367 (527)
..|+.+.++|.+++ ..|+++.+.+.++++..+..+.++.|.-|
T Consensus 33 ~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d 76 (298)
T 3ed3_A 33 NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCD 76 (298)
T ss_dssp SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEcc
Confidence 36888999999942 55599999999998876666888888776
No 436
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=31.00 E-value=28 Score=31.20 Aligned_cols=48 Identities=17% Similarity=0.146 Sum_probs=36.7
Q ss_pred ccccCc-eEEEEEccCChhHH-----HHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 009735 322 TWIMEQ-KHICLYGGEDLEWV-----RKFTALMGAVARAAGIALEMLYVGKSNPKE 371 (527)
Q Consensus 322 ~~i~eg-K~I~LYgg~d~~Wi-----~~FT~~~~~i~~~~~~~~E~v~Vgkd~~~e 371 (527)
++|..+ +.+.++|.++ || +...+.+.+++++.+..+.++-|.-|...+
T Consensus 27 ~~v~~~~~~vlVdF~A~--wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~ 80 (137)
T 2qsi_A 27 DFIAHSGKIVVLFFRGD--AVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERG 80 (137)
T ss_dssp HHHHTSSSEEEEEECCC--TTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHH
T ss_pred HHHhcCCCcEEEEEeCC--ccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHH
Confidence 344444 4899999994 65 669999999988766789999998875443
No 437
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=30.93 E-value=1.7e+02 Score=23.71 Aligned_cols=79 Identities=9% Similarity=-0.026 Sum_probs=43.5
Q ss_pred CeEEEEEeccCCCCCcchhhHHHHHHhhc-CCCceeec---CCC-CCCHHHHHHHHHhhCCCCCcEEEEeCCCCceeccc
Q 009735 204 QYEVVWLPIVDRSTPWTEAKEHKFEALQY-MMPWFSVH---HPS-AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 278 (527)
Q Consensus 204 ~fEIVwIpiVd~s~~w~D~~~~~F~~~~~-~MPWyAVp---f~~-~i~~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 278 (527)
.|+++..+ ..++.++.+.. .-|=+.+= .|+ .-..+..+.|++. .++|++++-+....-.-..
T Consensus 29 g~~v~~~~----------~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~---~~~~ii~ls~~~~~~~~~~ 95 (140)
T 3h5i_A 29 GYTVEIAL----------TGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQI---SELPVVFLTAHTEPAVVEK 95 (140)
T ss_dssp TCEEEEES----------SHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHH---CCCCEEEEESSSSCCCCGG
T ss_pred CCEEEEec----------ChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhC---CCCCEEEEECCCCHHHHHH
Confidence 48888653 23445555655 45555442 221 1123455566553 6889888877654433334
Q ss_pred HHHHHHHhCCccc---cCChhhHH
Q 009735 279 ALHMMWIWGSVAF---PFSVAREE 299 (527)
Q Consensus 279 A~~mI~~wG~~Af---PFT~~r~e 299 (527)
++ ..|+.+| ||+.+.+.
T Consensus 96 ~~----~~g~~~~l~KP~~~~~l~ 115 (140)
T 3h5i_A 96 IR----SVTAYGYVMKSATEQVLI 115 (140)
T ss_dssp GG----GSCEEEEEETTCCHHHHH
T ss_pred HH----hCCCcEEEeCCCCHHHHH
Confidence 43 3588877 77665543
No 438
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=30.90 E-value=73 Score=31.72 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=28.0
Q ss_pred cCcEEEEEEecCCCChhHHH--HHHHHHHHHhhhccCCCCCeEEEEEecc
Q 009735 166 RRKSVLLLVSDLDVSNEELF--LLEQMYRESRQLSSRTESQYEVVWLPIV 213 (527)
Q Consensus 166 ~gK~VlLyfSal~~~~~~~~--~L~~iY~~lk~~~~~~~~~fEIVwIpiV 213 (527)
.||+++..|++.+||-|.-. .|.+.++.. ...++.+|+.
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~~---------~Vr~i~~Pil 186 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKEN---------TVRMVVVGWL 186 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHHC---------EEEEEECCCS
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhCC---------cEEEEEeecc
Confidence 47899999999999999844 366555443 2566777764
No 439
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=30.67 E-value=39 Score=26.27 Aligned_cols=23 Identities=17% Similarity=0.134 Sum_probs=16.4
Q ss_pred HHHHHHhhCCCCCcEEEEeCCCCcee
Q 009735 250 IRYAKEKWDFRKKPILVVLDPQGRVV 275 (527)
Q Consensus 250 ~r~ike~~~~~~iP~LVvL~pqGkv~ 275 (527)
...+.+.+.+.++|.|++ +|+++
T Consensus 56 ~~~l~~~~g~~~vP~l~~---~g~~i 78 (92)
T 3ic4_A 56 IEKVHSISGSYSVPVVVK---GDKHV 78 (92)
T ss_dssp HHHHHHHHSSSCSCEEEE---TTEEE
T ss_pred HHHHHHhcCCCCcCEEEE---CCEEE
Confidence 345556678889999988 66544
No 440
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=29.34 E-value=33 Score=25.61 Aligned_cols=40 Identities=13% Similarity=-0.017 Sum_probs=28.3
Q ss_pred EEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 009735 330 ICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNP 369 (527)
Q Consensus 330 I~LYgg~d-~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~~ 369 (527)
..++|+++ -.+|+++.+.+.+++++.+..+.++.|.-+..
T Consensus 5 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~ 45 (85)
T 1fo5_A 5 KIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMEN 45 (85)
T ss_dssp EEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSS
T ss_pred EEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCC
Confidence 34555553 45669999999999876655788888876643
No 441
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=29.20 E-value=49 Score=26.74 Aligned_cols=18 Identities=6% Similarity=0.008 Sum_probs=12.8
Q ss_pred HHHHHHhhCCCCCcEEEE
Q 009735 250 IRYAKEKWDFRKKPILVV 267 (527)
Q Consensus 250 ~r~ike~~~~~~iP~LVv 267 (527)
.+.+++..+..++|++++
T Consensus 66 ~~~l~~~~g~~~vP~l~i 83 (103)
T 3nzn_A 66 VEEVRRFNPSVSFPTTII 83 (103)
T ss_dssp HHHHHHHCTTCCSCEEEE
T ss_pred HHHHHHhCCCCccCEEEE
Confidence 344455567888999887
No 442
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii}
Probab=27.26 E-value=64 Score=34.35 Aligned_cols=62 Identities=18% Similarity=0.255 Sum_probs=46.0
Q ss_pred CCccccCCCCceeecccccCcEEEEEEecCCC------ChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccC
Q 009735 148 QLPLVECPTKRKVSIDVLRRKSVLLLVSDLDV------SNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVD 214 (527)
Q Consensus 148 ~~pl~dg~~~~kV~Is~L~gK~VlLyfSal~~------~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd 214 (527)
.+.||+..|+++.+...+.+++|.+|.++.-. ......++..++..... -..|+|.||+=+|
T Consensus 4 ~l~~yntlt~~ke~f~p~~~~~v~~YvcGPtvy~~~HIGHaR~~v~~Dvl~R~lr-----~~Gy~V~~v~n~d 71 (462)
T 3tqo_A 4 SVKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLR-----MRGYEVTFVRNIT 71 (462)
T ss_dssp CCEEEETTTTEEEECCCSSTTEEEEEECCCBTTSCCBHHHHHHHHHHHHHHHHHH-----HTTCEEEEEECBB
T ss_pred eEEEEEcCCCceeccccCCCCeEEEEeCCCcCCCCCchhhhHHHHHHHHHHHHHH-----HcCCceEEecCcC
Confidence 46899999999999999999999999998752 12445566666666532 1359999998543
No 443
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=26.92 E-value=2.9e+02 Score=24.26 Aligned_cols=42 Identities=12% Similarity=-0.078 Sum_probs=30.2
Q ss_pred CceEEEEEccC-ChhHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 009735 326 EQKHICLYGGE-DLEWVRKFTALMGAVARAAGIALEMLYVGKS 367 (527)
Q Consensus 326 egK~I~LYgg~-d~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd 367 (527)
.||.+.+.|.+ .-.+|+.|.+.+.++.+..+..++++++.-+
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 56766655555 4588899999999997765446777777665
No 444
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=26.71 E-value=62 Score=25.05 Aligned_cols=22 Identities=9% Similarity=0.010 Sum_probs=15.3
Q ss_pred HHHHhh-CCCCCcEEEEeCCCCceec
Q 009735 252 YAKEKW-DFRKKPILVVLDPQGRVVN 276 (527)
Q Consensus 252 ~ike~~-~~~~iP~LVvL~pqGkv~~ 276 (527)
.+.+.+ ++.+.|++++ +|+.+.
T Consensus 45 ~l~~~~~~~~~vP~l~~---~g~~i~ 67 (89)
T 2klx_A 45 EMVQRANGRNTFPQIFI---GDYHVG 67 (89)
T ss_dssp HHHHHHHSSCCSCEEEE---TTEECC
T ss_pred HHHHHhCCCCCcCEEEE---CCEEEe
Confidence 344556 7889999865 677664
No 445
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=25.52 E-value=29 Score=28.91 Aligned_cols=27 Identities=4% Similarity=-0.052 Sum_probs=24.3
Q ss_pred CCCCCceeecCCCCcccceeeeeecc-C
Q 009735 500 AGRIPEKVVCAECGRRMEEFIMYRCC-T 526 (527)
Q Consensus 500 ~g~ip~~i~CpeC~R~ME~~v~YkCC-h 526 (527)
.+.+|+...||=|+.+|+-=|.-.|+ |
T Consensus 16 ~~~~p~~~~CpI~~~~m~dPV~~~cG~h 43 (98)
T 1wgm_A 16 YADACDEFLDPIMSTLMCDPVVLPSSRV 43 (98)
T ss_dssp CCSCCTTTBCTTTCSBCSSEEECTTTCC
T ss_pred hhcCcHhcCCcCccccccCCeECCCCCe
Confidence 56789999999999999999888888 7
No 446
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=25.34 E-value=82 Score=23.87 Aligned_cols=39 Identities=5% Similarity=0.071 Sum_probs=30.1
Q ss_pred EEEEEccCChhHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 009735 329 HICLYGGEDLEWVRKFTALMGAVARAAGIALEMLYVGKS 367 (527)
Q Consensus 329 ~I~LYgg~d~~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd 367 (527)
.|-+|.+..-..|+...+.+.++.++.+..++.+-|..+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~ 41 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTD 41 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTC
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCC
Confidence 366777766677888888888887666788888888764
No 447
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=24.63 E-value=31 Score=26.48 Aligned_cols=15 Identities=13% Similarity=0.151 Sum_probs=9.2
Q ss_pred CCCCCceeecCCCCc
Q 009735 500 AGRIPEKVVCAECGR 514 (527)
Q Consensus 500 ~g~ip~~i~CpeC~R 514 (527)
-++..+...||+||.
T Consensus 5 ~~~ll~~~~Cp~C~~ 19 (58)
T 1dl6_A 5 RLDALPRVTCPNHPD 19 (58)
T ss_dssp SCCCCSCCSBTTBSS
T ss_pred hhhccccccCcCCCC
Confidence 345566666777765
No 448
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=24.32 E-value=1.2e+02 Score=27.05 Aligned_cols=44 Identities=5% Similarity=-0.105 Sum_probs=31.9
Q ss_pred CceEEEEEcc-C-ChhHHHHHHHHHHHHHHH-hCCceeEEEeccCCc
Q 009735 326 EQKHICLYGG-E-DLEWVRKFTALMGAVARA-AGIALEMLYVGKSNP 369 (527)
Q Consensus 326 egK~I~LYgg-~-d~~Wi~~FT~~~~~i~~~-~~~~~E~v~Vgkd~~ 369 (527)
.||.+.|+|- . .-..|+.-.+.+.+++++ .+..++++.|+.|.+
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~ 75 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTH 75 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCH
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCH
Confidence 6899999884 3 335567777777777654 245799999999864
No 449
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=23.84 E-value=1.4e+02 Score=28.03 Aligned_cols=49 Identities=8% Similarity=0.013 Sum_probs=35.2
Q ss_pred ccccccCceEEEEEccC-C-hhHHHHHHHHHHHHHHH-hCCceeEEEeccCCch
Q 009735 320 IPTWIMEQKHICLYGGE-D-LEWVRKFTALMGAVARA-AGIALEMLYVGKSNPK 370 (527)
Q Consensus 320 I~~~i~egK~I~LYgg~-d-~~Wi~~FT~~~~~i~~~-~~~~~E~v~Vgkd~~~ 370 (527)
++++ .||++.|+|.. + -..|+.=.+.+.+++++ .+..++++.|+.|.+.
T Consensus 72 Lsd~--~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~ 123 (240)
T 3qpm_A 72 LSDY--RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQF 123 (240)
T ss_dssp GGGG--TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHH
T ss_pred HHHh--CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHH
Confidence 3444 79999998866 3 36666666777777664 3567999999998653
No 450
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=23.60 E-value=22 Score=31.73 Aligned_cols=14 Identities=21% Similarity=0.577 Sum_probs=11.5
Q ss_pred CCceeecCCCCccc
Q 009735 503 IPEKVVCAECGRRM 516 (527)
Q Consensus 503 ip~~i~CpeC~R~M 516 (527)
+-.+.+||+|||.-
T Consensus 96 ~EG~L~Cp~cgr~y 109 (125)
T 3q87_A 96 VEGSLRCDMCGLIY 109 (125)
T ss_dssp EEEEEEETTTCCEE
T ss_pred EEEEEECCCCCCEe
Confidence 55789999999963
No 451
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=23.31 E-value=33 Score=27.61 Aligned_cols=14 Identities=29% Similarity=0.731 Sum_probs=12.1
Q ss_pred CceeecCCCCcccc
Q 009735 504 PEKVVCAECGRRME 517 (527)
Q Consensus 504 p~~i~CpeC~R~ME 517 (527)
+-++.||.|||+.+
T Consensus 7 ~~~~~CP~Cgkp~~ 20 (68)
T 1lv3_A 7 TITVNCPTCGKTVV 20 (68)
T ss_dssp CCEEECTTTCCEEE
T ss_pred CCcCcCCCCCCccc
Confidence 45789999999986
No 452
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=23.30 E-value=55 Score=30.15 Aligned_cols=55 Identities=5% Similarity=0.023 Sum_probs=36.1
Q ss_pred ccCCCCceeecccccCcEEEEEEecCCCChhHHHHHHHHH---HHHhhhccCCCCCeEEEEEec
Q 009735 152 VECPTKRKVSIDVLRRKSVLLLVSDLDVSNEELFLLEQMY---RESRQLSSRTESQYEVVWLPI 212 (527)
Q Consensus 152 ~dg~~~~kV~Is~L~gK~VlLyfSal~~~~~~~~~L~~iY---~~lk~~~~~~~~~fEIVwIpi 212 (527)
..|.+-..+.- ...+|.+++-|.+.|||+|... ..+| +++.+ +..++..++.+|+
T Consensus 99 ~~g~~y~~l~~-p~~~~~~vveFf~~~C~~C~~~--~p~~~~~~~l~~---~~~~~v~~~~~~v 156 (197)
T 1un2_A 99 EDGKQYTTLEK-PVAGAPQVLEFFSFFCPHCYQF--EEVLHISDNVKK---KLPEGVKMTKYHV 156 (197)
T ss_dssp CBTTTEEECSS-CCTTCCSEEEEECTTCHHHHHH--HHTSCHHHHHTT---SSCTTCCEEEEEC
T ss_pred CCCCCceEccC-CCCCCCEEEEEECCCChhHHHh--CcccccHHHHHH---HCCCCCEEEEecc
Confidence 34544433321 2347888888999999999854 5555 67753 2345788999997
No 453
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=22.90 E-value=90 Score=25.41 Aligned_cols=15 Identities=0% Similarity=-0.358 Sum_probs=11.8
Q ss_pred EEEEecCCCChhHHH
Q 009735 171 LLLVSDLDVSNEELF 185 (527)
Q Consensus 171 lLyfSal~~~~~~~~ 185 (527)
..+||+.|||.|...
T Consensus 18 v~vy~~~~Cp~C~~a 32 (99)
T 3qmx_A 18 IEIYTWSTCPFCMRA 32 (99)
T ss_dssp EEEEECTTCHHHHHH
T ss_pred EEEEEcCCChhHHHH
Confidence 456899999999843
No 454
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=22.09 E-value=42 Score=26.93 Aligned_cols=22 Identities=14% Similarity=0.445 Sum_probs=18.5
Q ss_pred CCCCceeecCCCCcccceeeee
Q 009735 501 GRIPEKVVCAECGRRMEEFIMY 522 (527)
Q Consensus 501 g~ip~~i~CpeC~R~ME~~v~Y 522 (527)
..+|+.-+||.||.+=+.|...
T Consensus 35 ~~lPddw~CP~Cga~K~~F~~~ 56 (70)
T 1dx8_A 35 VDLSDSFMCPACRSPKNQFKSI 56 (70)
T ss_dssp GGSCTTCBCTTTCCBGGGEEEC
T ss_pred hhCCCCCcCCCCCCCHHHceEc
Confidence 5799999999999998888543
No 455
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=21.67 E-value=79 Score=31.61 Aligned_cols=48 Identities=4% Similarity=0.002 Sum_probs=34.5
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHh------CCceeEEEeccCCchh
Q 009735 324 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAA------GIALEMLYVGKSNPKE 371 (527)
Q Consensus 324 i~egK~I~LYgg~d~-~Wi~~FT~~~~~i~~~~------~~~~E~v~Vgkd~~~e 371 (527)
+..++.++++|.+.+ ..|+++.+.+.++++.. +..+-++.|.-+...+
T Consensus 19 ~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~ 73 (382)
T 2r2j_A 19 LNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSD 73 (382)
T ss_dssp HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHH
T ss_pred HhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHH
Confidence 567899999999953 55599999999887754 2346777776665443
No 456
>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17
Probab=21.21 E-value=1.1e+02 Score=26.85 Aligned_cols=34 Identities=15% Similarity=0.315 Sum_probs=25.2
Q ss_pred hCCceeEEEeccCCchhh----hhhhhhhhccccccCC
Q 009735 355 AGIALEMLYVGKSNPKEK----ARRIISTISVEKLSHT 388 (527)
Q Consensus 355 ~~~~~E~v~Vgkd~~~e~----v~~~~~~i~~e~ls~~ 388 (527)
.+.+|++.||.-.+|.+. -|+.++.|..|.+=+.
T Consensus 44 p~~~f~~~YIDI~~~~~~l~d~~~~~ae~I~ede~FYP 81 (111)
T 1xg8_A 44 PNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYP 81 (111)
T ss_dssp TTSCEEEEEEETTTC---CCHHHHHHHHHHHTTSSCSS
T ss_pred CCCceEEEEEeccCCccchhHHHHHHHHHHhhccccce
Confidence 478999999998776444 6778888888888553
No 457
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=21.16 E-value=77 Score=29.66 Aligned_cols=44 Identities=14% Similarity=0.127 Sum_probs=31.6
Q ss_pred CccccccCceEEEEEccCChhHH---HHHHHHHHHHHHH-hCCceeEEEeccC
Q 009735 319 VIPTWIMEQKHICLYGGEDLEWV---RKFTALMGAVARA-AGIALEMLYVGKS 367 (527)
Q Consensus 319 ~I~~~i~egK~I~LYgg~d~~Wi---~~FT~~~~~i~~~-~~~~~E~v~Vgkd 367 (527)
.++++ .||.+.|+|.+ .|| ++ .+.+.+++++ .+..++++-|+.+
T Consensus 50 ~Lsd~--~GKvvll~FwA--t~C~~c~e-~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 50 SFKQY--VGKHILFVNVA--TYCGLTAQ-YPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp EGGGG--TTSEEEEEEEC--SSSGGGGG-HHHHHHHHHHHGGGTEEEEEEECC
T ss_pred cHHHh--CCCEEEEEEeC--CCCCChHh-HHHHHHHHHHhccCCeEEEEEEcc
Confidence 34555 89999999999 676 53 3466777654 3456999999864
No 458
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=20.92 E-value=40 Score=25.06 Aligned_cols=19 Identities=26% Similarity=0.816 Sum_probs=16.8
Q ss_pred CCCceeecCCCCcccceee
Q 009735 502 RIPEKVVCAECGRRMEEFI 520 (527)
Q Consensus 502 ~ip~~i~CpeC~R~ME~~v 520 (527)
.+|+.-+||.||-+=+.|.
T Consensus 26 ~lP~dw~CP~Cg~~k~~F~ 44 (46)
T 6rxn_A 26 QLPDDWCCPVCGVSKDQFS 44 (46)
T ss_dssp GSCTTCBCTTTCCBGGGEE
T ss_pred hCCCCCcCcCCCCcHHHcE
Confidence 6899999999999888775
No 459
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B
Probab=20.83 E-value=73 Score=33.60 Aligned_cols=87 Identities=9% Similarity=0.196 Sum_probs=58.5
Q ss_pred CccccCCCCceeecccccCcEEEEEEecCC------CChhHHHHHHHHHHHHhhhccCCCCCeEEEEEeccCCCCCcchh
Q 009735 149 LPLVECPTKRKVSIDVLRRKSVLLLVSDLD------VSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEA 222 (527)
Q Consensus 149 ~pl~dg~~~~kV~Is~L~gK~VlLyfSal~------~~~~~~~~L~~iY~~lk~~~~~~~~~fEIVwIpiVd~s~~w~D~ 222 (527)
+.||+..|+++.+...+..+.|.+|+++.. +..-+..++..++.+.... ..|++.+|.-++ .|+|.
T Consensus 2 l~~ynt~t~~~~~f~p~~~~~v~~yv~gPt~y~~~HiGHar~~v~~D~l~R~lr~-----~G~~V~~v~~~t---D~d~k 73 (461)
T 1li5_A 2 LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRF-----LGYKLKYVRNIT---DIDDK 73 (461)
T ss_dssp CEEEETTTTEEEECCCSSTTEEEEEECCCBSSSCCBHHHHHHHHHHHHHHHHHHH-----HTCEEEEEECBB---CCSHH
T ss_pred cEEEeCCCCCccccccCCCCCeeEEEcCCcCCCCCcccccHHHHHHHHHHHHHHH-----cCCCEEEeecCC---CCcHH
Confidence 468999999999999999999999999876 2224455666666665321 248999997544 34332
Q ss_pred h---------------HHHHHHhhcCCCceeecCCC
Q 009735 223 K---------------EHKFEALQYMMPWFSVHHPS 243 (527)
Q Consensus 223 ~---------------~~~F~~~~~~MPWyAVpf~~ 243 (527)
- +..-+.++..|.||-|.+|+
T Consensus 74 i~~~A~~~g~~~~~~~~~~~~~f~~~~~~LgI~~~d 109 (461)
T 1li5_A 74 IIKRANENGESFVAMVDRMIAEMHKDFDALNILRPD 109 (461)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 1 12224566777788887754
No 460
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=20.82 E-value=42 Score=28.27 Aligned_cols=18 Identities=28% Similarity=0.719 Sum_probs=15.0
Q ss_pred CCCCCceeecCCCCcccc
Q 009735 500 AGRIPEKVVCAECGRRME 517 (527)
Q Consensus 500 ~g~ip~~i~CpeC~R~ME 517 (527)
..-.|+.|.|-|||+.+.
T Consensus 15 ksi~~d~iiClecGK~fK 32 (87)
T 2jsp_A 15 KSVQDDHIVCLECGGSFK 32 (87)
T ss_dssp TTBCSSCEECTBTCCEES
T ss_pred hccCCCceEecccchhhH
Confidence 446799999999999875
No 461
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=20.80 E-value=63 Score=27.05 Aligned_cols=38 Identities=3% Similarity=-0.119 Sum_probs=28.5
Q ss_pred EEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 009735 329 HICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 368 (527)
Q Consensus 329 ~I~LYgg~d~-~Wi~~FT~~~~~i~~~~~~~~E~v~Vgkd~ 368 (527)
.+.++|.+++ ..|+.+.+.+.++++..+ +.++.|.-++
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~ 71 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGS 71 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECT
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCC
Confidence 7888888853 566999999999987655 6666666643
No 462
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=20.34 E-value=1.5e+02 Score=25.07 Aligned_cols=48 Identities=2% Similarity=0.006 Sum_probs=31.5
Q ss_pred Cce--EEEEEc--cCChhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhh
Q 009735 326 EQK--HICLYG--GEDLEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARR 375 (527)
Q Consensus 326 egK--~I~LYg--g~d~~Wi~~FT~~~~~i~~~~-~~~~E~v~Vgkd~~~e~v~~ 375 (527)
.|| .+.|+| +....-|+.-.+.+.+++++. +.. +++.|+.|.+ +.+++
T Consensus 32 ~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~-~~~~~ 84 (159)
T 2a4v_A 32 TENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSV-TSQKK 84 (159)
T ss_dssp HHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCH-HHHHH
T ss_pred hCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCH-HHHHH
Confidence 455 788886 444456677777888876642 334 9999998854 33443
No 463
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=20.22 E-value=58 Score=26.98 Aligned_cols=22 Identities=32% Similarity=0.779 Sum_probs=18.6
Q ss_pred CCCCceeecCCCCcccceeeee
Q 009735 501 GRIPEKVVCAECGRRMEEFIMY 522 (527)
Q Consensus 501 g~ip~~i~CpeC~R~ME~~v~Y 522 (527)
..+|+.-+||.||.+=+.|...
T Consensus 55 edlPddW~CPvCga~K~~F~~i 76 (81)
T 2kn9_A 55 DDIPDDWSCPDCGAAKSDFEMV 76 (81)
T ss_dssp TTSCTTCCCTTTCCCGGGEEEE
T ss_pred hHCCCCCcCCCCCCCHHHcEEc
Confidence 4799999999999998888543
No 464
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=20.05 E-value=48 Score=25.05 Aligned_cols=21 Identities=24% Similarity=0.433 Sum_probs=16.2
Q ss_pred eecCCCCCCCCceeecCCCCc
Q 009735 494 LILPGEAGRIPEKVVCAECGR 514 (527)
Q Consensus 494 ~~~p~~~g~ip~~i~CpeC~R 514 (527)
.++....=.+.-.|.||-||-
T Consensus 11 ~~fs~~el~~lP~IrCpyCGy 31 (48)
T 4ayb_P 11 KTFTDEQLKVLPGVRCPYCGY 31 (48)
T ss_dssp TTCCCCCSCCCSSSCCTTTCC
T ss_pred CCccHHHHhhCCCcccCccCc
Confidence 456666667788899999994
Done!