Your job contains 1 sequence.
>009739
MSGNSAELTKNEAPGEDLPGSSKSTEQDAPPAEALPAVNVNPLDTNTVSDVKNLESHSTP
LQEPPSISLDVLGDTSSADPDIQPSAYASVKAKTLEVPNTIEDTTAETDTILSSNSELPE
SSKVEAPDNSPVESKAGHAAASKAEASTAEPHADSIAELPAESEAKPSFKVQAATPNRNA
APSDTELKNVNDTEIKDKVNKSELPTLPMNEKSNSAQLFLLDGNDEGSESGTEEEQSSFM
EELENFFRDRSMEFKPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKT
CTTVSWTFRGFYEKALLDYERHKTSGGELSLPVASQSQPMNIDNQASGSGRARRDAAARA
MQGWHSQHVLGSDEISDPIIKDKNHLSLQKCEKQLKSRGLIKRKKPSYMELAVKAARTKT
SKSQLDVAVVDLGPPADWVKINVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEP
EHPDNPWGVTPFKKVVSLPARIDPHLTSAVVTLHGQLFVRVPFEQTD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009739
(527 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2827523 - symbol:AT2G17410 species:3702 "Arabi... 1087 4.8e-110 1
TAIR|locus:2037345 - symbol:AT1G20910 species:3702 "Arabi... 832 5.0e-83 1
TAIR|locus:2199824 - symbol:AT1G76110 species:3702 "Arabi... 129 2.2e-05 1
UNIPROTKB|F1LMH4 - symbol:Arid4b "AT-rich interactive dom... 103 0.00058 2
RGD|619919 - symbol:Arid4b "AT rich interactive domain 4B... 103 0.00059 2
>TAIR|locus:2827523 [details] [associations]
symbol:AT2G17410 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
Pfam:PF00011 InterPro:IPR002068 GO:GO:0005634 EMBL:CP002685
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 InterPro:IPR008978
SUPFAM:SSF49764 PROSITE:PS01031 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:AY052359 EMBL:BT002633 EMBL:AK176382 EMBL:AK230281
IPI:IPI00548500 PIR:G84551 RefSeq:NP_179333.2 UniGene:At.12107
ProteinModelPortal:Q940Y3 SMR:Q940Y3 PRIDE:Q940Y3
EnsemblPlants:AT2G17410.1 GeneID:816247 KEGG:ath:AT2G17410
TAIR:At2g17410 eggNOG:NOG313221 HOGENOM:HOG000151156
InParanoid:Q940Y3 OMA:NDANNES PhylomeDB:Q940Y3
ProtClustDB:CLSN2680092 Genevestigator:Q940Y3 Uniprot:Q940Y3
Length = 786
Score = 1087 (387.7 bits), Expect = 4.8e-110, P = 4.8e-110
Identities = 246/534 (46%), Positives = 314/534 (58%)
Query: 4 NSAELTKNEAPGEDLPGS-SKSTEQDAPPAEALPAVNVNPLDTNTVSDVKNLES-H--ST 59
N+ + + EA +L G S + + D L V P + T+S +++ S H T
Sbjct: 260 NNDRIDEGEANNLNLAGDGSGAVDHDYLTKTELDKVLEVP-GSETISKLEDRPSEHLSET 318
Query: 60 PLQEPPSISL---DVLGDTSSADPDIQPSAYASVKAKTLEVPNXXXXXXXXXXXXLSSNS 116
+ + + ++L D + D+ + + V ++ ++
Sbjct: 319 SMNVEKELEMPAVEILPDNDK-NSDVLAVGVSGDSDNVVSVLPASQTSSDRDEGMITVDA 377
Query: 117 ELPESSKVEAPDNSPVXXXXXXXXXXXXXXXXX-XPHADSIAELPAESEAKPSFKVQAAT 175
E E K++ PD+ V D+ + L S V+
Sbjct: 378 EPTEDMKLDVPDSKLVTDTTVDSTNNKDAHVEANTERQDNSSALVLNDANNESAPVKRV- 436
Query: 176 PNRNAAPSDTELKNVNDTEIKDKVNKSELPTLPMNEKSNSAQL-FLLDGNDXXXXXXXXX 234
P A S+ + + ++ + V+K + T P+ + + A+ FLLD
Sbjct: 437 PGPYVASSNIKSEARGSGDLNNGVHKI-VRTPPVFDGTMRAKRSFLLDDASDGNESGTEE 495
Query: 235 XXXXXXXXXXNFFRDRSMEFKPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGES 294
+FFR+R+M+FKPPKFYGEGLNCLKLWRAVTRLGGY+KVT KLWRQVGES
Sbjct: 496 DQSAFMKELDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTGSKLWRQVGES 555
Query: 295 FKPPKTCTTVSWTFRGFYEKALLDYERHKTSGGELSLPVASQSQPMNIDNQXXXXXXXXX 354
F+PPKTCTTVSWTFRGFYEKALL+YERHK S GEL +P+ + +PMNIDNQ
Sbjct: 556 FRPPKTCTTVSWTFRGFYEKALLEYERHKVSEGELQIPLPLELEPMNIDNQASGSGRARR 615
Query: 355 XXXXXXMQGWHSQHVLGSDEISDPIIKDKNHLSLQKCEKQLKSR-GLIKRKKPSYMELAV 413
MQGWHSQ + G+ E+SDP IKDKN + QK EKQ+ + GL+KRK+ + E
Sbjct: 616 DAASRAMQGWHSQRLNGNGEVSDPAIKDKNLVLHQKREKQIGTTPGLLKRKRAA--EHGA 673
Query: 414 KAARTKTSKSQLDVAVVDLGPPADWVKINVQRTKDCFEVYALVPGLLREEVRVQSDPAGR 473
K A SKS LDV VVD+GPPADWVKINVQRT+DCFEVYALVPGL+REEVRVQSDPAGR
Sbjct: 674 KNA-IHVSKSMLDVTVVDVGPPADWVKINVQRTQDCFEVYALVPGLVREEVRVQSDPAGR 732
Query: 474 LVISGEPEHPDNPWGVTPFKKVVSLPARIDPHLTSAVVTLHGQLFVRVPFEQTD 527
LVISGEPE+P NPWG TPFKKVVSLP RIDPH TSAVVTL+GQLFVRVP EQ +
Sbjct: 733 LVISGEPENPMNPWGATPFKKVVSLPTRIDPHHTSAVVTLNGQLFVRVPLEQLE 786
>TAIR|locus:2037345 [details] [associations]
symbol:AT1G20910 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
InterPro:IPR002068 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
InterPro:IPR008978 SUPFAM:SSF49764 PROSITE:PS01031
Gene3D:1.10.150.60 SUPFAM:SSF46774 ProtClustDB:CLSN2680092
EMBL:AC007369 EMBL:AB493470 IPI:IPI00543271 PIR:G86341
RefSeq:NP_173515.2 UniGene:At.43690 ProteinModelPortal:C0SUW7
SMR:C0SUW7 PaxDb:C0SUW7 PRIDE:C0SUW7 EnsemblPlants:AT1G20910.1
GeneID:838684 KEGG:ath:AT1G20910 TAIR:At1g20910 eggNOG:NOG284320
HOGENOM:HOG000239411 OMA:ANNGHGM PhylomeDB:C0SUW7
Genevestigator:C0SUW7 Uniprot:C0SUW7
Length = 398
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 162/285 (56%), Positives = 207/285 (72%)
Query: 246 FFRDRSMEFKPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVS 305
F+++ +EFKPPKFYG+ LN LKLWRAV LGGYE VT+ KLWRQVGESF PPKTCTTVS
Sbjct: 119 FYKESFLEFKPPKFYGQPLNILKLWRAVVNLGGYEVVTTNKLWRQVGESFNPPKTCTTVS 178
Query: 306 WTFRGFYEKALLDYERHKTSGGELSLP-----VASQSQPMNIDNQXXXXXXXXXXXXXXX 360
+TFR FYEKALL+YE+ + GEL+LP ++S + +Q
Sbjct: 179 YTFRNFYEKALLEYEKCLRNNGELNLPGSTLILSSSVEKEPSSHQGSGSGRARRDSAARA 238
Query: 361 MQGWHSQHVLGSDEISDPIIKDKNHLSLQKCEKQLKSRGLIKRKKPSYMELAVKAARTKT 420
MQGWH+Q ++GS E++ P +KDK +S K K+LKS GL K K+ + M+ V T
Sbjct: 239 MQGWHAQRLVGSGEVTAPAVKDKGLISTPK-HKKLKSIGLQKHKQQTSMDHVV----TNE 293
Query: 421 SKSQLDVAVVDLGPPADWVKINVQRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEP 480
+ QL VVD+GP ADWVKINV+ +KD FE++ALVPGLLR+EVR+QSDPAG++VI+G+P
Sbjct: 294 ADKQLAAEVVDVGPVADWVKINVKESKDSFEIFALVPGLLRKEVRIQSDPAGKVVITGQP 353
Query: 481 EHPDNPWGVTPFKKVVSLPARIDPHLTSAVVTLHGQLFVRVPFEQ 525
E DNPWG+TPFKK+V L ARIDP TSAV+++HG+LF+RVPFEQ
Sbjct: 354 EQLDNPWGITPFKKIVDLSARIDPLHTSAVMSMHGRLFIRVPFEQ 398
>TAIR|locus:2199824 [details] [associations]
symbol:AT1G76110 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006333 "chromatin
assembly or disassembly" evidence=RCA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0031348 "negative regulation of defense response"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR009071 InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 Pfam:PF00505
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:AC009978 Gene3D:1.10.150.60
SUPFAM:SSF46774 eggNOG:NOG327790 HOGENOM:HOG000243289
ProtClustDB:CLSN2681954 HSSP:P11632 EMBL:AY099630 EMBL:BT008823
IPI:IPI00540147 PIR:B96789 RefSeq:NP_177738.1 UniGene:At.43665
ProteinModelPortal:Q9SGS2 SMR:Q9SGS2 IntAct:Q9SGS2 PaxDb:Q9SGS2
PRIDE:Q9SGS2 EnsemblPlants:AT1G76110.1 GeneID:843943
KEGG:ath:AT1G76110 TAIR:At1g76110 InParanoid:Q9SGS2 OMA:FMIPVIG
PhylomeDB:Q9SGS2 Genevestigator:Q9SGS2 Uniprot:Q9SGS2
Length = 338
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 35/87 (40%), Positives = 47/87 (54%)
Query: 251 SMEFKPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTVSWTFRG 310
S +F P G+ L+ L+ VTR GGYEKV K WR+VG F+ T T+ S+ R
Sbjct: 56 STKFMIPVIGGKELDLHVLYVEVTRRGGYEKVVVEKKWREVGGVFRFSATTTSASFVLRK 115
Query: 311 FYEKALLDYER-HK-TSGGELSLPVAS 335
Y L YE+ H T+ G L P+A+
Sbjct: 116 HYLNLLFHYEQVHLFTARGPLLHPIAT 142
>UNIPROTKB|F1LMH4 [details] [associations]
symbol:Arid4b "AT-rich interactive domain-containing
protein 4B" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
InterPro:IPR002999 RGD:619919 GO:GO:0003677 GO:GO:0005622
SMART:SM00333 Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR012603
Pfam:PF08169 GeneTree:ENSGT00510000046413 IPI:IPI00202459
EMBL:AC131129 Ensembl:ENSRNOT00000022445 ArrayExpress:F1LMH4
Uniprot:F1LMH4
Length = 1226
Score = 103 (41.3 bits), Expect = 0.00059, Sum P(2) = 0.00058
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 246 FFRDRSMEF-KPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTV 304
F DR K P LN KL+R V +LGG++ + S +W+QV + P +
Sbjct: 318 FMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAA 377
Query: 305 SWTFRGFYEKALLDYERHKTSGG---ELSLPVASQSQP 339
+ + Y+K L +E + S +++LP ++P
Sbjct: 378 GYNVKCAYKKYLYGFEEYCRSANIDFQMALPEKVLNKP 415
Score = 69 (29.3 bits), Expect = 0.00059, Sum P(2) = 0.00058
Identities = 32/117 (27%), Positives = 47/117 (40%)
Query: 376 SDPIIKDKNHLSLQKCEKQLKSRGLIKRKKPSYMELAVKAARTKTSKSQLDVAV-VDLGP 434
S P+ + +S +K E + P+ E T+TS+ Q V V V L P
Sbjct: 908 SKPVEEKPLEVSDRKTEFPSSGSNSVLNTPPTTPESPSSVTVTETSQQQSSVTVSVPLPP 967
Query: 435 PADWVKINVQRTKDCFEVYALVPGLLREEVRVQSDPAG-RLVISG------EPEHPD 484
+ V+ T EV ++V L + S PAG +S EPEHP+
Sbjct: 968 NQEEVRSIKSETDSTIEVDSVVGELQDLQSEGNSSPAGFNASVSSSSSNQPEPEHPE 1024
>RGD|619919 [details] [associations]
symbol:Arid4b "AT rich interactive domain 4B (Rbp1 like)"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0034773 "histone H4-K20 trimethylation"
evidence=ISO] [GO:0036124 "histone H3-K9 trimethylation"
evidence=ISO] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 InterPro:IPR002999 RGD:619919 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 SMART:SM00333
Gene3D:1.10.150.60 SUPFAM:SSF46774 eggNOG:NOG248805
HOGENOM:HOG000015398 HOVERGEN:HBG058247 InterPro:IPR012603
Pfam:PF08169 HSSP:Q14865 CTD:51742 EMBL:AF245512 IPI:IPI00202459
RefSeq:NP_445873.1 UniGene:Rn.47249 ProteinModelPortal:Q9JKB5
STRING:Q9JKB5 PRIDE:Q9JKB5 GeneID:84481 KEGG:rno:84481
UCSC:RGD:619919 NextBio:617002 ArrayExpress:Q9JKB5
Genevestigator:Q9JKB5 Uniprot:Q9JKB5
Length = 1228
Score = 103 (41.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 246 FFRDRSMEF-KPPKFYGEGLNCLKLWRAVTRLGGYEKVTSCKLWRQVGESFKPPKTCTTV 304
F DR K P LN KL+R V +LGG++ + S +W+QV + P +
Sbjct: 319 FMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAA 378
Query: 305 SWTFRGFYEKALLDYERHKTSGG---ELSLPVASQSQP 339
+ + Y+K L +E + S +++LP ++P
Sbjct: 379 GYNVKCAYKKYLYGFEEYCRSANIDFQMALPEKVLNKP 416
Score = 69 (29.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 32/117 (27%), Positives = 47/117 (40%)
Query: 376 SDPIIKDKNHLSLQKCEKQLKSRGLIKRKKPSYMELAVKAARTKTSKSQLDVAV-VDLGP 434
S P+ + +S +K E + P+ E T+TS+ Q V V V L P
Sbjct: 910 SKPVEEKPLEVSDRKTEFPSSGSNSVLNTPPTTPESPSSVTVTETSQQQSSVTVSVPLPP 969
Query: 435 PADWVKINVQRTKDCFEVYALVPGLLREEVRVQSDPAG-RLVISG------EPEHPD 484
+ V+ T EV ++V L + S PAG +S EPEHP+
Sbjct: 970 NQEEVRSIKSETDSTIEVDSVVGELQDLQSEGNSSPAGFNASVSSSSSNQPEPEHPE 1026
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.128 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 527 463 0.00096 118 3 11 23 0.36 35
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 616 (65 KB)
Total size of DFA: 277 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.49u 0.18s 38.67t Elapsed: 00:00:01
Total cpu time: 38.49u 0.18s 38.67t Elapsed: 00:00:01
Start: Sat May 11 00:31:47 2013 End: Sat May 11 00:31:48 2013