Query 009741
Match_columns 527
No_of_seqs 340 out of 2148
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 11:58:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009741.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009741hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kwu_A MUNC13-1; calcium bindi 99.8 6.2E-19 2.1E-23 157.6 17.9 119 8-126 11-146 (148)
2 2ep6_A MCTP2 protein; beta san 99.8 3E-19 1E-23 156.8 15.2 119 9-127 8-132 (133)
3 2fk9_A Protein kinase C, ETA t 99.8 2.5E-19 8.7E-24 161.1 12.1 114 11-126 26-156 (157)
4 2dmh_A Myoferlin; beta-sandwic 99.8 2.5E-18 8.7E-23 152.1 16.9 120 10-130 3-136 (140)
5 1wfj_A Putative elicitor-respo 99.8 1.6E-18 5.5E-23 152.6 13.8 121 9-129 5-132 (136)
6 3b7y_A E3 ubiquitin-protein li 99.8 4.6E-18 1.6E-22 152.8 16.4 118 9-126 15-152 (153)
7 1gmi_A Protein kinase C, epsil 99.8 1.5E-18 5.1E-23 152.9 12.7 114 12-127 4-133 (136)
8 3m7f_B E3 ubiquitin-protein li 99.8 9E-18 3.1E-22 154.7 16.1 119 10-128 4-142 (176)
9 1rlw_A Phospholipase A2, CALB 99.8 1E-17 3.4E-22 145.4 13.9 113 13-127 2-123 (126)
10 3pyc_A E3 ubiquitin-protein li 99.7 2.3E-17 7.8E-22 144.5 15.6 112 12-124 3-130 (132)
11 2b3r_A Phosphatidylinositol-4- 99.7 7.3E-17 2.5E-21 141.7 13.6 102 12-114 18-130 (134)
12 2z0u_A WW domain-containing pr 99.7 3.4E-17 1.2E-21 147.5 10.5 103 12-114 41-155 (155)
13 2nq3_A Itchy homolog E3 ubiqui 99.7 1.4E-16 4.9E-21 146.0 14.2 117 11-128 33-162 (173)
14 3f04_A Synaptotagmin-1; C2A, c 99.7 6.2E-17 2.1E-21 143.7 11.1 104 11-114 31-142 (143)
15 1rsy_A Synaptotagmin I; calciu 99.7 1.3E-16 4.4E-21 143.3 12.8 103 12-114 40-150 (152)
16 3fdw_A Synaptotagmin-like prot 99.7 4.8E-17 1.7E-21 145.4 9.9 106 11-116 20-136 (148)
17 2bwq_A Regulating synaptic mem 99.7 1.2E-16 4.1E-21 139.1 12.0 103 11-113 15-129 (129)
18 2d8k_A Synaptotagmin VII; exoc 99.7 1.9E-16 6.5E-21 140.2 13.0 104 11-114 23-135 (141)
19 3rdl_A Protein kinase C alpha 99.7 1.1E-16 3.8E-21 140.8 11.5 103 12-114 14-124 (137)
20 1a25_A CALB, protein kinase C 99.7 1.5E-16 5.2E-21 142.3 12.0 102 13-114 30-139 (149)
21 1rh8_A Piccolo protein; beta-s 99.7 5.4E-17 1.8E-21 143.9 7.8 104 13-116 17-140 (142)
22 2q3x_A Regulating synaptic mem 99.7 1.7E-16 5.7E-21 145.5 10.9 104 12-115 28-140 (171)
23 3fbk_A RGS3, RGP3, regulator o 99.7 3.1E-16 1.1E-20 140.9 12.4 104 11-115 24-138 (153)
24 1wfm_A Synaptotagmin XIII; C2 99.7 5.9E-16 2E-20 136.6 13.6 100 12-114 24-132 (138)
25 1v27_A Regulating synaptic mem 99.7 2.2E-16 7.5E-21 139.6 10.1 104 11-114 18-133 (141)
26 2chd_A Rabphilin-3A, exophilin 99.7 4.6E-16 1.6E-20 137.9 11.6 104 11-114 26-140 (142)
27 1ugk_A Synaptotagmin IV, KIAA1 99.7 7.1E-16 2.4E-20 136.0 12.5 105 11-115 19-134 (138)
28 2dmg_A KIAA1228 protein; beta- 99.7 2.2E-16 7.7E-21 139.9 9.2 106 11-117 21-138 (142)
29 3n5a_A Synaptotagmin-7; calciu 99.6 7.1E-16 2.4E-20 135.7 11.9 103 11-113 13-123 (138)
30 1tjx_A Similar to synaptotagmi 99.6 1.4E-15 4.7E-20 137.6 13.4 104 11-114 22-147 (159)
31 2cm5_A Rabphilin-3A; protein t 99.6 1.6E-16 5.6E-21 144.7 7.3 102 12-113 35-144 (166)
32 2enp_A B/K protein; C2 type 1, 99.6 5.1E-16 1.7E-20 138.5 9.6 105 11-115 23-142 (147)
33 1w15_A Synaptotagmin IV; metal 99.6 3.3E-16 1.1E-20 140.7 7.4 102 12-113 28-137 (153)
34 2r83_A Synaptotagmin-1; C2A-C2 99.6 4.1E-15 1.4E-19 147.4 15.4 149 11-170 16-179 (284)
35 1dqv_A Synaptotagmin III; beta 99.6 1E-14 3.5E-19 145.6 14.4 151 11-172 17-183 (296)
36 3nsj_A Perforin-1; pore formin 99.6 2.1E-14 7.3E-19 153.3 15.2 111 12-127 392-504 (540)
37 3jzy_A Intersectin 2; C2 domai 99.6 3.3E-14 1.1E-18 152.6 16.2 116 11-126 384-507 (510)
38 2cjt_A UNC-13 homolog A, MUNC1 99.5 7.5E-14 2.6E-18 121.9 14.6 84 13-102 4-88 (131)
39 2cjs_A UNC-13 homolog A, MUNC1 99.5 4.7E-14 1.6E-18 128.3 12.3 85 12-102 12-97 (167)
40 2r83_A Synaptotagmin-1; C2A-C2 99.5 2.9E-13 1E-17 133.9 13.3 103 12-114 148-272 (284)
41 3l9b_A Otoferlin; C2-domain, b 99.4 2.6E-12 9E-17 111.2 13.9 112 11-127 18-140 (144)
42 1djx_A PLC-D1, phosphoinositid 99.4 2.3E-12 7.8E-17 140.6 16.8 106 12-118 495-609 (624)
43 1cjy_A CPLA2, protein (cytosol 99.4 5.4E-13 1.8E-17 146.8 11.1 103 11-114 15-126 (749)
44 1dqv_A Synaptotagmin III; beta 99.4 1.7E-13 5.9E-18 136.6 3.4 101 12-112 150-259 (296)
45 3bxj_A RAS GTPase-activating p 99.2 1.2E-12 4E-17 139.2 0.4 98 11-113 8-115 (483)
46 3pfq_A PKC-B, PKC-beta, protei 99.2 4E-11 1.4E-15 132.9 9.4 102 13-114 171-280 (674)
47 3qr0_A Phospholipase C-beta (P 99.0 4.1E-09 1.4E-13 117.2 15.1 106 13-127 649-771 (816)
48 1yrk_A NPKC-delta, protein kin 98.9 1.7E-08 5.7E-13 84.9 14.1 108 13-126 5-124 (126)
49 3ohm_B 1-phosphatidylinositol- 98.9 4.8E-09 1.6E-13 117.3 14.0 105 13-126 724-844 (885)
50 2enj_A NPKC-theta, protein kin 98.9 1.2E-08 4.1E-13 86.8 12.8 115 9-129 5-132 (138)
51 2zkm_X 1-phosphatidylinositol- 98.9 9.6E-09 3.3E-13 114.7 13.7 98 12-118 676-784 (799)
52 2hth_B Vacuolar protein sortin 93.5 0.78 2.7E-05 39.4 11.3 90 191-283 38-130 (140)
53 2cay_A VPS36 PH domain, vacuol 92.8 0.51 1.7E-05 40.8 9.0 85 190-283 50-134 (145)
54 1em2_A MLN64 protein; beta bar 91.0 2.4 8.1E-05 39.3 12.3 71 421-495 142-218 (229)
55 3p0l_A Steroidogenic acute reg 90.9 1.4 4.7E-05 40.8 10.4 146 340-505 59-213 (221)
56 2pcs_A Conserved protein; stru 90.2 7.6 0.00026 33.3 14.3 143 336-506 3-148 (162)
57 2wql_A Major allergen DAU C 1; 90.1 4.7 0.00016 35.0 12.5 144 340-506 8-153 (154)
58 1ln1_A PC-TP, phosphatidylchol 88.6 5.7 0.00019 36.1 12.7 120 339-473 55-181 (214)
59 3qsz_A STAR-related lipid tran 88.0 2.8 9.6E-05 37.4 10.0 144 339-500 30-177 (189)
60 2r55_A STAR-related lipid tran 86.6 17 0.00058 33.4 14.8 148 339-506 70-228 (231)
61 4a8u_A Major pollen allergen B 86.0 16 0.00056 31.6 16.4 150 339-510 6-157 (159)
62 3p9v_A Uncharacterized protein 85.7 17 0.00056 31.4 13.6 137 341-505 12-150 (161)
63 2pso_A STAR-related lipid tran 85.4 3.2 0.00011 38.9 9.1 79 420-507 147-228 (237)
64 1icx_A Protein LLR18A, LLPR10. 85.4 17 0.00058 31.3 16.0 148 339-509 6-154 (155)
65 1jss_A Stard4, cholesterol-reg 84.9 6.8 0.00023 36.0 11.1 145 339-504 70-221 (224)
66 2qim_A PR10.2B; trans-zeatin, 84.8 19 0.00063 31.1 17.1 150 338-509 6-156 (158)
67 3l4c_A Dedicator of cytokinesi 83.5 14 0.00047 34.0 12.0 56 47-102 78-140 (220)
68 1tw0_A Pathogenesis-related cl 82.9 22 0.00076 30.6 16.0 149 338-508 5-154 (157)
69 1lw3_A Myotubularin-related pr 81.9 9.7 0.00033 40.9 11.8 73 169-243 79-160 (657)
70 1zsq_A Myotubularin-related pr 81.6 10 0.00034 39.8 11.7 73 170-242 8-87 (528)
71 2yf0_A Myotubularin-related pr 80.1 4.5 0.00015 42.3 8.4 52 189-243 23-74 (512)
72 2ns9_A Hypothetical protein AP 75.9 34 0.0012 28.6 16.9 140 337-504 14-154 (157)
73 2wxf_A Phosphatidylinositol-4, 75.3 22 0.00074 40.2 12.7 87 13-102 216-324 (940)
74 2vjg_A Major allergen DAU C 1; 74.8 40 0.0014 28.9 16.1 146 338-506 6-153 (154)
75 2e3n_A Lipid-transfer protein 74.4 16 0.00055 34.2 10.0 80 423-506 156-250 (255)
76 3rws_A MTN13 protein; zeatin, 74.0 45 0.0015 29.1 16.1 150 338-512 11-165 (168)
77 1t77_A Lipopolysaccharide-resp 73.9 6.4 0.00022 39.8 7.2 68 176-243 2-84 (414)
78 1pfj_A TFIIH basal transcripti 72.4 16 0.00055 29.5 7.9 93 173-284 5-103 (108)
79 1e09_A PRU AV 1; allergen, maj 67.9 58 0.002 27.9 16.3 150 338-510 5-157 (159)
80 2vq5_A S-norcoclaurine synthas 62.6 79 0.0027 28.5 11.5 147 338-509 31-181 (201)
81 3hhm_A Phosphatidylinositol-4, 60.9 52 0.0018 37.6 11.9 87 14-102 355-455 (1091)
82 3ie5_A Phenolic oxidative coup 58.7 91 0.0031 27.0 13.5 149 337-510 11-163 (165)
83 2flh_A Cytokinin-specific bind 56.9 92 0.0031 26.5 15.4 144 338-507 5-153 (155)
84 2i9y_A Major latex protein-lik 56.4 98 0.0034 26.7 12.2 145 337-507 18-165 (166)
85 1e7u_A Phosphatidylinositol 3- 54.3 1E+02 0.0035 34.8 12.8 88 14-102 218-330 (961)
86 3fo5_A Thioesterase, adipose a 49.8 43 0.0015 31.5 7.7 118 339-470 91-215 (258)
87 2l9p_A Uncharacterized protein 42.5 1.5E+02 0.005 25.1 9.6 112 337-463 9-121 (164)
88 2yrb_A Protein fantom; beta sa 41.0 60 0.002 28.0 6.5 90 11-102 15-116 (156)
89 2y3a_A Phosphatidylinositol-4, 36.2 40 0.0014 38.6 5.8 69 13-84 352-430 (1092)
90 2d4r_A Hypothetical protein TT 30.7 2E+02 0.0068 22.7 14.8 57 445-506 88-144 (147)
91 1zyi_A Methylosome subunit pic 30.5 1.2E+02 0.0041 26.6 6.8 59 181-242 32-92 (171)
92 1w7p_D VPS36P, YLR417W; ESCRT- 30.2 11 0.00037 39.8 0.0 40 192-231 44-83 (566)
93 1t17_A Conserved hypothetical 28.9 54 0.0018 27.3 4.3 26 443-472 90-115 (148)
94 3tfz_A Cyclase; helix-GRIP, BE 21.0 3.2E+02 0.011 23.1 8.1 108 341-473 10-118 (172)
No 1
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.81 E-value=6.2e-19 Score=157.63 Aligned_cols=119 Identities=29% Similarity=0.482 Sum_probs=105.0
Q ss_pred CCCCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEEEeeeecCCCCCeeccEEEEEecCCCcEEEEEEEEcCCC-
Q 009741 8 PQTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDII- 86 (527)
Q Consensus 8 ~~~~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~~~V~d~d~~- 86 (527)
+.+...+.|.|+|++|++|++++..|.+||||++.++.+.++|+++++++||.|||+|.|.+..+...|.|+|||++..
T Consensus 11 ~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 11 GTSKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDI 90 (148)
T ss_dssp ----CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSH
T ss_pred cccccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCc
Confidence 3444579999999999999999999999999999999999999999999999999999999987778899999999986
Q ss_pred ----------CCCceeEEEEEEcccCCCcccEEEEccC------CCceEEEEEEEe
Q 009741 87 ----------WKSTVLGSVIVTVESEGQTGAVWYTLDS------PSGQVCLHIKTI 126 (527)
Q Consensus 87 ----------~~d~~iG~~~i~l~~l~~~~~~w~~L~~------~~G~i~l~l~~~ 126 (527)
+++++||++.++|.++......|++|.+ ..|+|+++|++.
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGCCSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccccccccCCCCccEEEEEEEHHHCcCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 7899999999999999777789999974 238888887765
No 2
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.81 E-value=3e-19 Score=156.79 Aligned_cols=119 Identities=23% Similarity=0.420 Sum_probs=107.5
Q ss_pred CCCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEEEeeeecCCCCCeeccEEEEEecCCCcEEEEEEEEcCCCCC
Q 009741 9 QTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWK 88 (527)
Q Consensus 9 ~~~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~~~V~d~d~~~~ 88 (527)
+....+.|.|+|++|++|++.+..|.+||||++.++.+..+|+++++++||.|||+|.|.+.+....|.|+|||++..++
T Consensus 8 ~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~~ 87 (133)
T 2ep6_A 8 DVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKP 87 (133)
T ss_dssp SCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTEE
T ss_pred ccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCCC
Confidence 44678999999999999999999999999999999999999999999999999999999998777889999999999989
Q ss_pred CceeEEEEEEcccCCCcccEEEEccC------CCceEEEEEEEee
Q 009741 89 STVLGSVIVTVESEGQTGAVWYTLDS------PSGQVCLHIKTIK 127 (527)
Q Consensus 89 d~~iG~~~i~l~~l~~~~~~w~~L~~------~~G~i~l~l~~~~ 127 (527)
+++||++.+++.++..+...|++|.. ..|+|++.+++..
T Consensus 88 ~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 88 PDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp EEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred CCeeEEEEEEHHHccCCCceEEEeecCCCCCccceEEEEEEEEEe
Confidence 99999999999999766789999964 2488888887753
No 3
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.80 E-value=2.5e-19 Score=161.14 Aligned_cols=114 Identities=15% Similarity=0.222 Sum_probs=100.6
Q ss_pred CCceEEEEEEEEeecCCCCCC----------CCCCCcEEEEEECCeE-EEeeeecCCCCCeeccEEEEEecCCCcEEEEE
Q 009741 11 NSAYLIKLELLAAKNLIGANL----------NGTSDPYAIITCGSEK-RFSSMVPGSRYPMWGEEFNFSVDELPVQIIVT 79 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~----------~g~~dPyv~v~~~~~~-~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~~~ 79 (527)
...|.|.|+|++|++|+++|. .|.+||||++.++... .+|+++++++||.|||+|.|.+.+ ...|.|+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~ 104 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELA 104 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEE
Confidence 458999999999999999873 2679999999998766 589999999999999999999875 5689999
Q ss_pred EEEcCCCCCCceeEEEEEEcccC--C----CcccEEEEccCCCceEEEEEEEe
Q 009741 80 IYDWDIIWKSTVLGSVIVTVESE--G----QTGAVWYTLDSPSGQVCLHIKTI 126 (527)
Q Consensus 80 V~d~d~~~~d~~iG~~~i~l~~l--~----~~~~~w~~L~~~~G~i~l~l~~~ 126 (527)
|||++.+++|++||++.|+|.++ + ...+.|++|.+ .|++++.+++.
T Consensus 105 V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-~G~i~l~l~~~ 156 (157)
T 2fk9_A 105 VFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-EGKVFVVITLT 156 (157)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-SCEEEEEEEEC
T ss_pred EEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-CcEEEEEEEEE
Confidence 99999999999999999999987 2 44689999986 89999888874
No 4
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=2.5e-18 Score=152.09 Aligned_cols=120 Identities=18% Similarity=0.319 Sum_probs=102.7
Q ss_pred CCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEEEeeeecCCCCCeeccEEEEEecC----CCcEEEEEEEEcCC
Q 009741 10 TNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDE----LPVQIIVTIYDWDI 85 (527)
Q Consensus 10 ~~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~v~~----~~~~L~~~V~d~d~ 85 (527)
+...|.|.|+|++|++|+..+. |.+||||++.++.++++|+++++++||.|||+|.|.+.. ....|.|+|||++.
T Consensus 3 s~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~ 81 (140)
T 2dmh_A 3 SGSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET 81 (140)
T ss_dssp SCBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC
T ss_pred CCCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC
Confidence 3567899999999999999998 999999999999999999999999999999999999864 25679999999999
Q ss_pred CCCCceeEEEEEEcccC--CCcccEEEE---ccCC-----CceEEEEEEEeeccc
Q 009741 86 IWKSTVLGSVIVTVESE--GQTGAVWYT---LDSP-----SGQVCLHIKTIKLPV 130 (527)
Q Consensus 86 ~~~d~~iG~~~i~l~~l--~~~~~~w~~---L~~~-----~G~i~l~l~~~~~~~ 130 (527)
+++|++||++.++|.++ +...+.|+. |... .|++++++++.+.+.
T Consensus 82 ~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~~ 136 (140)
T 2dmh_A 82 IGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPPSG 136 (140)
T ss_dssp SSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCCBS
T ss_pred CCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECCCC
Confidence 99999999999999998 444578988 5432 277777777776443
No 5
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.78 E-value=1.6e-18 Score=152.61 Aligned_cols=121 Identities=21% Similarity=0.369 Sum_probs=105.2
Q ss_pred CCCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEEEeeeec-CCCCCeeccEEEEEecCCCcEEEEEEEEcCCCC
Q 009741 9 QTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIW 87 (527)
Q Consensus 9 ~~~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~-~t~nP~W~e~f~f~v~~~~~~L~~~V~d~d~~~ 87 (527)
.....+.|.|+|++|++|+..+..|.+||||++.++.+..+|++++ +++||.|||+|.|.+.+....|.|+|||++.++
T Consensus 5 ~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~ 84 (136)
T 1wfj_A 5 SSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGT 84 (136)
T ss_dssp CCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCT
T ss_pred CCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCC
Confidence 3456899999999999999999999999999999998889999998 899999999999999876788999999999999
Q ss_pred CCceeEEEEEEcccC---CCcccEEEEccC---CCceEEEEEEEeecc
Q 009741 88 KSTVLGSVIVTVESE---GQTGAVWYTLDS---PSGQVCLHIKTIKLP 129 (527)
Q Consensus 88 ~d~~iG~~~i~l~~l---~~~~~~w~~L~~---~~G~i~l~l~~~~~~ 129 (527)
+|++||++.++|.++ +.....||+|.. ..|++++.+.+.+..
T Consensus 85 ~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 85 EDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp TTCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEECC
T ss_pred CCceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeCC
Confidence 999999999999988 333578999962 236777777776543
No 6
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.78 E-value=4.6e-18 Score=152.84 Aligned_cols=118 Identities=19% Similarity=0.333 Sum_probs=95.4
Q ss_pred CCCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEEEeeeecCCCCCeeccEEEEEecCCCcEEEEEEEE
Q 009741 9 QTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYD 82 (527)
Q Consensus 9 ~~~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~~~V~d 82 (527)
.....+.|.|+|++|++|+.++..|.+||||++.+.. ..++|+++++++||.|||+|.|.+......|.|+|||
T Consensus 15 ~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d 94 (153)
T 3b7y_A 15 DEENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFD 94 (153)
T ss_dssp CCTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEE
T ss_pred CCCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEE
Confidence 3467899999999999999999899999999999863 4679999999999999999999998767789999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCc--c------cEEEEccCC------CceEEEEEEEe
Q 009741 83 WDIIWKSTVLGSVIVTVESEGQT--G------AVWYTLDSP------SGQVCLHIKTI 126 (527)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~l~~~--~------~~w~~L~~~------~G~i~l~l~~~ 126 (527)
++.++++++||++.++|.++... . ..||+|.++ .|+|++++++.
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 99999999999999999998321 1 489999653 37888877764
No 7
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.77 E-value=1.5e-18 Score=152.94 Aligned_cols=114 Identities=18% Similarity=0.238 Sum_probs=99.9
Q ss_pred CceEEEEEEEEeecCCCCCCCCC-----------CCcEEEEEECCeE-EEeeeecCCCCCeeccEEEEEecCCCcEEEEE
Q 009741 12 SAYLIKLELLAAKNLIGANLNGT-----------SDPYAIITCGSEK-RFSSMVPGSRYPMWGEEFNFSVDELPVQIIVT 79 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~~g~-----------~dPyv~v~~~~~~-~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~~~ 79 (527)
..|.|.|+|++|++|++++..+. +||||++.++... .+|+++++++||.|||+|.|.+.+. ..|.|+
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~ 82 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELA 82 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEE
Confidence 36899999999999999886544 9999999998765 5899999999999999999998764 789999
Q ss_pred EEEcCCCCCCceeEEEEEEcccCCC----cccEEEEccCCCceEEEEEEEee
Q 009741 80 IYDWDIIWKSTVLGSVIVTVESEGQ----TGAVWYTLDSPSGQVCLHIKTIK 127 (527)
Q Consensus 80 V~d~d~~~~d~~iG~~~i~l~~l~~----~~~~w~~L~~~~G~i~l~l~~~~ 127 (527)
|||++.+++|++||++.+++.++.. ..+.|++|.+ .|++++.|++..
T Consensus 83 V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~-~G~i~l~l~~~~ 133 (136)
T 1gmi_A 83 VFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-EGKVYVIIDLSG 133 (136)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-SCEEEEEEEEEE
T ss_pred EEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC-CeEEEEEEEEEe
Confidence 9999999999999999999998832 2378999986 899999998874
No 8
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.76 E-value=9e-18 Score=154.71 Aligned_cols=119 Identities=20% Similarity=0.314 Sum_probs=96.0
Q ss_pred CCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEEEeeeecCCCCCeeccEEEEEecCCCcEEEEEEEEc
Q 009741 10 TNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDW 83 (527)
Q Consensus 10 ~~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~~~V~d~ 83 (527)
....|.|.|+|++|++|+.++..|.+||||++.+.. ..++|+++++++||.|||+|.|.+......|.|+|||+
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~ 83 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDE 83 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEEC
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEEC
Confidence 356799999999999999999999999999999864 56799999999999999999999987677899999999
Q ss_pred CCCCCCceeEEEEEEcccCCCc-cc-------EEEEccCC------CceEEEEEEEeec
Q 009741 84 DIIWKSTVLGSVIVTVESEGQT-GA-------VWYTLDSP------SGQVCLHIKTIKL 128 (527)
Q Consensus 84 d~~~~d~~iG~~~i~l~~l~~~-~~-------~w~~L~~~------~G~i~l~l~~~~~ 128 (527)
+.++++++||++.|+|..+... .. .||+|.++ .|.|++.|.+.+.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 9999999999999999998322 11 79999752 4888888888765
No 9
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.75 E-value=1e-17 Score=145.39 Aligned_cols=113 Identities=19% Similarity=0.354 Sum_probs=96.2
Q ss_pred ceEEEEEEEEeecCCCC---CCCCCCCcEEEEEECC---eEEEeeeecCCCCCeeccEEEEEec-CCCcEEEEEEEEcCC
Q 009741 13 AYLIKLELLAAKNLIGA---NLNGTSDPYAIITCGS---EKRFSSMVPGSRYPMWGEEFNFSVD-ELPVQIIVTIYDWDI 85 (527)
Q Consensus 13 ~g~L~V~vi~A~~L~~~---d~~g~~dPyv~v~~~~---~~~~T~~~~~t~nP~W~e~f~f~v~-~~~~~L~~~V~d~d~ 85 (527)
.+.|.|+|++|++|+++ +..|.+||||++.++. ..++|+++++++||.|||+|.|.+. .....|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 58899999999999984 6678999999999974 6789999999999999999999985 345679999999998
Q ss_pred CCCCceeEEEEEEcccC--CCcccEEEEccCCCceEEEEEEEee
Q 009741 86 IWKSTVLGSVIVTVESE--GQTGAVWYTLDSPSGQVCLHIKTIK 127 (527)
Q Consensus 86 ~~~d~~iG~~~i~l~~l--~~~~~~w~~L~~~~G~i~l~l~~~~ 127 (527)
. ++++||++.++|.++ +.....|++|.+ .|++.++|+++.
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~-~~~g~i~~~le~ 123 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKKEVPFIFNQ-VTEMVLEMSLEV 123 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEEEEEEEETT-TEEEEEEEEEEC
T ss_pred C-CCceeEEEEEEHHHccCCCcEEEEEEcCC-CceEEEEEEEEe
Confidence 7 488999999999998 445578999986 566666666553
No 10
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.75 E-value=2.3e-17 Score=144.50 Aligned_cols=112 Identities=23% Similarity=0.375 Sum_probs=95.6
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC--eEEEeeeecCCCCCeeccEEEEEecCCCcEEEEEEEEcCCCCC-
Q 009741 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS--EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWK- 88 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~--~~~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~~~V~d~d~~~~- 88 (527)
....|.|+|++|++|++++..|.+||||++.++. ..++|+++++++||.|||+|.|.+... ..|.|+|||++..++
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT-DSITISVWNHKKIHKK 81 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT-CCEEEEEEEGGGTTSS
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC-CEEEEEEEECCCCCCC
Confidence 4578999999999999999999999999999864 778999999999999999999998764 459999999998876
Q ss_pred --CceeEEEEEEcccC---CCcccEEEEccCC--------CceEEEEEE
Q 009741 89 --STVLGSVIVTVESE---GQTGAVWYTLDSP--------SGQVCLHIK 124 (527)
Q Consensus 89 --d~~iG~~~i~l~~l---~~~~~~w~~L~~~--------~G~i~l~l~ 124 (527)
|++||++.+++..+ ......|++|..+ .|+|.++|.
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~ 130 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQ 130 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEE
Confidence 89999999998887 4445789999653 366666654
No 11
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.71 E-value=7.3e-17 Score=141.74 Aligned_cols=102 Identities=15% Similarity=0.312 Sum_probs=90.1
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEEEeeeecCCCCCeeccEEEEE-ecC---CCcEEEEEEEE
Q 009741 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFS-VDE---LPVQIIVTIYD 82 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~-v~~---~~~~L~~~V~d 82 (527)
..+.|.|+|++|++|+. +..|.+||||++.+ .....+|+++++++||.|||+|.|. +.. ....|.|+|||
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d 96 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLS 96 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEE
Confidence 46889999999999987 77899999999998 3467899999999999999999999 753 34689999999
Q ss_pred cCCCCCCceeEEEEEEcccC--CCcccEEEEccC
Q 009741 83 WDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (527)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~l--~~~~~~w~~L~~ 114 (527)
++.++++++||++.++|.++ +.....||+|.+
T Consensus 97 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 97 AESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp CCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred CCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 99999999999999999998 355678999976
No 12
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.70 E-value=3.4e-17 Score=147.48 Aligned_cols=103 Identities=15% Similarity=0.121 Sum_probs=91.1
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEEEeeeecCCCCCeeccEEEEEecCC---CcEEEEEEEE
Q 009741 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYD 82 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~~~V~d 82 (527)
..+.|.|.|++|++|++++..|.+||||++++.. .+++|+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d 120 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCT 120 (155)
T ss_dssp TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEE
Confidence 4678999999999999999999999999999854 268999999999999999999998542 4579999999
Q ss_pred cCCCCCCceeEEEEEEcccC---CCcccEEEEccC
Q 009741 83 WDIIWKSTVLGSVIVTVESE---GQTGAVWYTLDS 114 (527)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~l---~~~~~~w~~L~~ 114 (527)
+|.++++++||++.++|.++ ......||+|.+
T Consensus 121 ~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~~ 155 (155)
T 2z0u_A 121 TDRSHLEECLGGAQISLAEVCRSGERSTRWYNLLS 155 (155)
T ss_dssp ECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEBC
T ss_pred CCCCCCCcEEEEEEEEHHHccCCCCccccceEccC
Confidence 99999999999999999998 355678999863
No 13
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.70 E-value=1.4e-16 Score=146.04 Aligned_cols=117 Identities=12% Similarity=0.220 Sum_probs=95.8
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEEEeeeecCCCCCeeccEEEEEecCCCcEEEEEEEEcCCCCCCc
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWKST 90 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~~~V~d~d~~~~d~ 90 (527)
...+.|.|+|++|++|+..+..+.+||||++.++...++|+++++++||.|||+|.|.+.. ...|.|+|||++.+++|+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~-~~~L~~~V~D~d~~~~dd 111 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP-VSKLHFRVWSHQTLKSDV 111 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT-TCEEEEEEEECCSSSCCE
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC-CCEEEEEEEECCCCCCCc
Confidence 3578899999999999944445559999999999988999999999999999999999864 788999999999999999
Q ss_pred eeEEEEEEcccCC---C----cccEEEEccCC------CceEEEEEEEeec
Q 009741 91 VLGSVIVTVESEG---Q----TGAVWYTLDSP------SGQVCLHIKTIKL 128 (527)
Q Consensus 91 ~iG~~~i~l~~l~---~----~~~~w~~L~~~------~G~i~l~l~~~~~ 128 (527)
+||++.++|.++. . ....|++|..+ .|+|.+.|.+...
T Consensus 112 ~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 112 LLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp EEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred eEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 9999999999871 1 12569999653 2666665555543
No 14
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.70 E-value=6.2e-17 Score=143.70 Aligned_cols=104 Identities=23% Similarity=0.420 Sum_probs=92.4
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEEEeeeecCCCCCeeccEEEEEecCC---CcEEEEEEEEcC
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDWD 84 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~---~~~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~~~V~d~d 84 (527)
...+.|.|+|++|++|+..+..+.+||||++.+ +...++|+++++++||.|||+|.|.+... ...|.|+|||++
T Consensus 31 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 110 (143)
T 3f04_A 31 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 110 (143)
T ss_dssp TTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCC
Confidence 356889999999999999998999999999998 45578999999999999999999997532 467999999999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEEccC
Q 009741 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (527)
Q Consensus 85 ~~~~d~~iG~~~i~l~~l--~~~~~~w~~L~~ 114 (527)
.++++++||++.++|.++ +.....|++|.+
T Consensus 111 ~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 111 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp SSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 999999999999999998 445778999975
No 15
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.69 E-value=1.3e-16 Score=143.29 Aligned_cols=103 Identities=23% Similarity=0.427 Sum_probs=91.8
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEEEeeeecCCCCCeeccEEEEEecC---CCcEEEEEEEEcCC
Q 009741 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWDI 85 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~---~~~~~~T~~~~~t~nP~W~e~f~f~v~~---~~~~L~~~V~d~d~ 85 (527)
..+.|.|+|++|++|+..+..+.+||||++.+ +....+|+++++++||.|||+|.|.+.. ....|.|+|||++.
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 119 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 119 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC
Confidence 56789999999999999999999999999998 3557899999999999999999998753 25779999999999
Q ss_pred CCCCceeEEEEEEcccC--CCcccEEEEccC
Q 009741 86 IWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (527)
Q Consensus 86 ~~~d~~iG~~~i~l~~l--~~~~~~w~~L~~ 114 (527)
++++++||++.++|.++ +...+.|++|.+
T Consensus 120 ~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 120 FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp SSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 99999999999999998 455689999975
No 16
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.69 E-value=4.8e-17 Score=145.35 Aligned_cols=106 Identities=15% Similarity=0.214 Sum_probs=92.1
Q ss_pred CCceEEEEEEEEeecCCCCC-CCCCCCcEEEEEEC-----CeEEEeeeecCCCCCeeccEEEEEecCC---CcEEEEEEE
Q 009741 11 NSAYLIKLELLAAKNLIGAN-LNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIY 81 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d-~~g~~dPyv~v~~~-----~~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~~~V~ 81 (527)
...+.|.|+|++|++|++++ ..|.+||||++.+. ..+++|+++++++||.|||+|.|.+... ...|.|+||
T Consensus 20 ~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~ 99 (148)
T 3fdw_A 20 QQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVW 99 (148)
T ss_dssp TTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEE
T ss_pred CCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEE
Confidence 35688999999999999888 58899999999985 3477999999999999999999998653 346999999
Q ss_pred EcCCCCCCceeEEEEEEcccC--CCcccEEEEccCCC
Q 009741 82 DWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSPS 116 (527)
Q Consensus 82 d~d~~~~d~~iG~~~i~l~~l--~~~~~~w~~L~~~~ 116 (527)
|++.++++++||++.++|.++ ......||+|.++.
T Consensus 100 d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 136 (148)
T 3fdw_A 100 HHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKI 136 (148)
T ss_dssp EECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC-
T ss_pred ECCCCcCCcEEEEEEEEcccccccCCccceEECcCcc
Confidence 999999999999999999998 45567999998753
No 17
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.69 E-value=1.2e-16 Score=139.14 Aligned_cols=103 Identities=22% Similarity=0.406 Sum_probs=85.6
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEEEeeeecCCCCCeeccEEEEEe-cC---CCcEEEEEEE
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSV-DE---LPVQIIVTIY 81 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~v-~~---~~~~L~~~V~ 81 (527)
...+.|.|+|++|++|++++..|.+||||++.+ +...++|+++++++||.|||+|.|.+ .. ....|.|+||
T Consensus 15 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~ 94 (129)
T 2bwq_A 15 KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLW 94 (129)
T ss_dssp TTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEE
T ss_pred cCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEE
Confidence 346899999999999999999999999999998 35678999999999999999999995 31 2467999999
Q ss_pred EcCCCCC--CceeEEEEEEcccC-CCcccEEEEcc
Q 009741 82 DWDIIWK--STVLGSVIVTVESE-GQTGAVWYTLD 113 (527)
Q Consensus 82 d~d~~~~--d~~iG~~~i~l~~l-~~~~~~w~~L~ 113 (527)
|++..++ +++||++.++|.++ .....+||+|.
T Consensus 95 d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~Lq 129 (129)
T 2bwq_A 95 DQARVREEESEFLGEILIELETALLDDEPHWYKLQ 129 (129)
T ss_dssp EC-------CEEEEEEEEEGGGCCCSSCEEEEECC
T ss_pred ECCcCcCcCCceeEEEEEEccccCCCcCCccEECc
Confidence 9999887 99999999999998 34478899984
No 18
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=1.9e-16 Score=140.23 Aligned_cols=104 Identities=20% Similarity=0.352 Sum_probs=91.4
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeEEEeeeecCCCCCeeccEEEEEecC----CCcEEEEEEEEc
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE----LPVQIIVTIYDW 83 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~v~~----~~~~L~~~V~d~ 83 (527)
...+.|.|+|++|++|+.++..|.+||||++.+. ....+|+++++++||.|||+|.|.+.. ....|.|+|||+
T Consensus 23 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 102 (141)
T 2d8k_A 23 FQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDY 102 (141)
T ss_dssp SSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEEC
T ss_pred CCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEEC
Confidence 3568899999999999999999999999999983 457899999999999999999998522 256799999999
Q ss_pred CCCCCCceeEEEEEEcccC--CCcccEEEEccC
Q 009741 84 DIIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (527)
Q Consensus 84 d~~~~d~~iG~~~i~l~~l--~~~~~~w~~L~~ 114 (527)
+.++++++||++.++|.++ +.....|++|.+
T Consensus 103 d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 103 DRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp CSSSSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred CCCCCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 9999999999999999998 445678999976
No 19
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.69 E-value=1.1e-16 Score=140.78 Aligned_cols=103 Identities=27% Similarity=0.494 Sum_probs=92.0
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEEEeeeecCCCCCeeccEEEEEecCC--CcEEEEEEEEcC
Q 009741 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSVDEL--PVQIIVTIYDWD 84 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~v~~~--~~~L~~~V~d~d 84 (527)
..+.|.|+|++|++|+.++..|.+||||++.+ .....+|+++++++||.|||+|.|.+... ...|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 35899999999999999999999999999998 45678999999999999999999998542 357999999999
Q ss_pred CCCCCceeEEEEEEcccC-CCcccEEEEccC
Q 009741 85 IIWKSTVLGSVIVTVESE-GQTGAVWYTLDS 114 (527)
Q Consensus 85 ~~~~d~~iG~~~i~l~~l-~~~~~~w~~L~~ 114 (527)
..+++++||++.++|.++ ......||+|.+
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~ 124 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMPASGWYKLLN 124 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSCEEEEEECBC
T ss_pred CCCCCceEEEEEEeHHHhccCccCceEECcC
Confidence 999999999999999998 344789999975
No 20
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.68 E-value=1.5e-16 Score=142.28 Aligned_cols=102 Identities=27% Similarity=0.471 Sum_probs=91.0
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeEEEeeeecCCCCCeeccEEEEEecCC--CcEEEEEEEEcCC
Q 009741 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDEL--PVQIIVTIYDWDI 85 (527)
Q Consensus 13 ~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~-----~~~~~T~~~~~t~nP~W~e~f~f~v~~~--~~~L~~~V~d~d~ 85 (527)
.+.|.|+|++|++|+.++..+.+||||++.+. ...++|+++++++||.|||+|.|.+... ...|.|+|||++.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 46799999999999999999999999999985 4578999999999999999999998653 4579999999999
Q ss_pred CCCCceeEEEEEEcccC-CCcccEEEEccC
Q 009741 86 IWKSTVLGSVIVTVESE-GQTGAVWYTLDS 114 (527)
Q Consensus 86 ~~~d~~iG~~~i~l~~l-~~~~~~w~~L~~ 114 (527)
++++++||++.++|.++ ....+.||+|.+
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~ 139 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKAGVDGWFKLLS 139 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTCCEEEEEECBC
T ss_pred CCCCCEEEEEEEEHHHhCcCccCCeEEccC
Confidence 99999999999999998 345678999975
No 21
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.67 E-value=5.4e-17 Score=143.86 Aligned_cols=104 Identities=25% Similarity=0.447 Sum_probs=90.8
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe--------------EEEeeeecCCCCCeeccEEEEE-ecC---CCc
Q 009741 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGSE--------------KRFSSMVPGSRYPMWGEEFNFS-VDE---LPV 74 (527)
Q Consensus 13 ~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~~--------------~~~T~~~~~t~nP~W~e~f~f~-v~~---~~~ 74 (527)
.+.|.|+|++|++|++++..|.+||||++.+... .++|+++++++||.|||+|.|. +.. ...
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 4689999999999999999999999999999753 3589999999999999999997 532 356
Q ss_pred EEEEEEEEcCCCCCCceeEEEEEEcccC--CCcccEEEEccCCC
Q 009741 75 QIIVTIYDWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSPS 116 (527)
Q Consensus 75 ~L~~~V~d~d~~~~d~~iG~~~i~l~~l--~~~~~~w~~L~~~~ 116 (527)
.|.|+|||++.++++++||++.++|..+ ......||+|.+..
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 8999999999999999999999999988 35578999998643
No 22
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.67 E-value=1.7e-16 Score=145.47 Aligned_cols=104 Identities=16% Similarity=0.279 Sum_probs=90.8
Q ss_pred CceEEEEEEEEeecCCCCCC-CCCCCcEEEEEECC-----eEEEeeeecCCCCCeeccEEEEEecCCCcEEEEEEE-EcC
Q 009741 12 SAYLIKLELLAAKNLIGANL-NGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIY-DWD 84 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~-~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~~~V~-d~d 84 (527)
..+.|.|+|++|++|++++. .|.+||||++.+.. ..++|+++++++||.|||+|.|.+......|.|+|| |++
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYG 107 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECS
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCC
Confidence 35789999999999999985 79999999999753 267899999999999999999998766678999999 999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEEccCC
Q 009741 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (527)
Q Consensus 85 ~~~~d~~iG~~~i~l~~l--~~~~~~w~~L~~~ 115 (527)
.++++++||++.++|.++ +.....||+|.++
T Consensus 108 ~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 108 RMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp TTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 999999999999999998 4567899999863
No 23
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.67 E-value=3.1e-16 Score=140.93 Aligned_cols=104 Identities=26% Similarity=0.427 Sum_probs=90.9
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEEEeeeecCCCCCeeccEEEEEe--cCCCcEEEEEEEEc
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSV--DELPVQIIVTIYDW 83 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~v--~~~~~~L~~~V~d~ 83 (527)
...+.|.|+|++|++|++.+ .|.+||||++.+ .....+|+++++++||.|||+|.|.+ .+....|.|+|||+
T Consensus 24 ~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 102 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNR 102 (153)
T ss_dssp ESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEEC
T ss_pred CCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeC
Confidence 45788999999999999998 699999999998 33568999999999999999999998 44456799999999
Q ss_pred CCCCC-CceeEEEEEEcccCC---CcccEEEEccCC
Q 009741 84 DIIWK-STVLGSVIVTVESEG---QTGAVWYTLDSP 115 (527)
Q Consensus 84 d~~~~-d~~iG~~~i~l~~l~---~~~~~w~~L~~~ 115 (527)
+.+++ +++||++.++|.++. .....||+|.++
T Consensus 103 d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 103 ASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp CSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred CCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 99877 999999999999983 566789999763
No 24
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=5.9e-16 Score=136.64 Aligned_cols=100 Identities=16% Similarity=0.221 Sum_probs=87.3
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---C-eEEEeeeecCCCCCeeccEEEEEecCC---CcEEEEEEEEcC
Q 009741 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---S-EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDWD 84 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~---~-~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~~~V~d~d 84 (527)
..+.|.|+|++|+ +++..|.+||||++.+. . ..++|+++++++||.|||+|.|.+... ...|.|+|||+|
T Consensus 24 ~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d 100 (138)
T 1wfm_A 24 QKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCD 100 (138)
T ss_dssp TTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECC
Confidence 4678999999999 46778999999999983 2 256899999999999999999998643 457999999999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEEccC
Q 009741 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (527)
Q Consensus 85 ~~~~d~~iG~~~i~l~~l--~~~~~~w~~L~~ 114 (527)
.++++++||++.++|.++ ......|++|.+
T Consensus 101 ~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 101 RFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp SSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred CCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 999999999999999998 566789999976
No 25
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.66 E-value=2.2e-16 Score=139.64 Aligned_cols=104 Identities=22% Similarity=0.407 Sum_probs=90.6
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEEEeeeecCCCCCeeccEEEEEe-cC---CCcEEEEEEE
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSV-DE---LPVQIIVTIY 81 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~v-~~---~~~~L~~~V~ 81 (527)
...+.|.|+|++|++|+.++..|.+||||++.+ ....++|+++++++||.|||+|.|.+ .. ....|.|+||
T Consensus 18 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 97 (141)
T 1v27_A 18 KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLW 97 (141)
T ss_dssp TTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEE
T ss_pred CCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEE
Confidence 346889999999999999999999999999998 35677999999999999999999994 32 2467999999
Q ss_pred EcCCCCC--CceeEEEEEEcccC-CCcccEEEEccC
Q 009741 82 DWDIIWK--STVLGSVIVTVESE-GQTGAVWYTLDS 114 (527)
Q Consensus 82 d~d~~~~--d~~iG~~~i~l~~l-~~~~~~w~~L~~ 114 (527)
|++..++ +++||++.++|.++ ......||+|.+
T Consensus 98 d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L~~ 133 (141)
T 1v27_A 98 DQARVREEESEFLGEILIELETALLDDEPHWYKLQT 133 (141)
T ss_dssp EBCSSSSCCBCCCEEEEEEGGGCCCSSEEEEEECBC
T ss_pred ECCCCcCCCCceEEEEEEEccccCCCCCCceEECcc
Confidence 9999887 99999999999998 444679999976
No 26
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.66 E-value=4.6e-16 Score=137.86 Aligned_cols=104 Identities=18% Similarity=0.316 Sum_probs=90.1
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEEEeeeecCCCCCeeccEEEEE-ecCC---CcEEEEEEE
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFS-VDEL---PVQIIVTIY 81 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~-v~~~---~~~L~~~V~ 81 (527)
...+.|.|+|++|++|+.++..|.+||||++.+.. ..++|+++++++||.|||+|.|. +... ...|.|+||
T Consensus 26 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 105 (142)
T 2chd_A 26 QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVC 105 (142)
T ss_dssp GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEE
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEE
Confidence 35678999999999999999999999999999864 67899999999999999999998 5432 257999999
Q ss_pred EcCCCCCCceeEEEEEEcccC--CCcccEEEEccC
Q 009741 82 DWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (527)
Q Consensus 82 d~d~~~~d~~iG~~~i~l~~l--~~~~~~w~~L~~ 114 (527)
|++.++++++||++.++|.++ +.....|++|..
T Consensus 106 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 106 DEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred ECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 999999999999999999998 344567888764
No 27
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.65 E-value=7.1e-16 Score=135.99 Aligned_cols=105 Identities=18% Similarity=0.224 Sum_probs=89.4
Q ss_pred CCceEEEEEEEEeecCCCCCCC-CCCCcEEEEEEC---CeEEEeeeecCCCCCeeccEEEEE-ecCC---CcEEEEEEEE
Q 009741 11 NSAYLIKLELLAAKNLIGANLN-GTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFS-VDEL---PVQIIVTIYD 82 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~-g~~dPyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~-v~~~---~~~L~~~V~d 82 (527)
...+.|.|+|++|++|+.++.. +.+||||++.+. ...++|+++++++||.|||+|.|. +... ...|.|+|||
T Consensus 19 ~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d 98 (138)
T 1ugk_A 19 FERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILS 98 (138)
T ss_dssp GGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEE
Confidence 3567899999999999999985 899999999985 367899999999999999999996 6432 3579999999
Q ss_pred cCCCCCCceeEEEEEEcccCC---CcccEEEEccCC
Q 009741 83 WDIIWKSTVLGSVIVTVESEG---QTGAVWYTLDSP 115 (527)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~l~---~~~~~w~~L~~~ 115 (527)
++.++++++||++.++|.++. .....|++|.++
T Consensus 99 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 99 FDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp ECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred CCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 999999999999999999983 223467999753
No 28
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=2.2e-16 Score=139.90 Aligned_cols=106 Identities=26% Similarity=0.399 Sum_probs=89.7
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeEEEeeeecCCCCCeeccEEEEEecC---CCcEEEEEEEE
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYD 82 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~-----~~~~~T~~~~~t~nP~W~e~f~f~v~~---~~~~L~~~V~d 82 (527)
...+.|.|+|++|++|++++..| +||||++.+. ...++|+++++++||.|||+|.|.+.. ....|.|+|||
T Consensus 21 ~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 99 (142)
T 2dmg_A 21 SQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKN 99 (142)
T ss_dssp TTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEE
T ss_pred CCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEE
Confidence 34678999999999999999888 9999999983 256799999999999999999999753 13579999999
Q ss_pred cCCCCC--CceeEEEEEEcccC--CCcccEEEEccCCCc
Q 009741 83 WDIIWK--STVLGSVIVTVESE--GQTGAVWYTLDSPSG 117 (527)
Q Consensus 83 ~d~~~~--d~~iG~~~i~l~~l--~~~~~~w~~L~~~~G 117 (527)
++.+++ +++||++.++|..+ ......|++|.++.+
T Consensus 100 ~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~ 138 (142)
T 2dmg_A 100 SGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSG 138 (142)
T ss_dssp CCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCS
T ss_pred CCCccccCCcEEEEEEEecccccccccccceeeccCCCC
Confidence 998764 57999999999988 446778999986443
No 29
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.65 E-value=7.1e-16 Score=135.74 Aligned_cols=103 Identities=26% Similarity=0.402 Sum_probs=88.2
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEEEeeeecCCCCCeeccEEEEEecCCC---cEEEEEEEE
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDELP---VQIIVTIYD 82 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~v~~~~---~~L~~~V~d 82 (527)
...+.|.|+|++|++|+..+..|.+||||++.+.. ...+|+++++++||.|||+|.|.+.... ..|.|+|||
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d 92 (138)
T 3n5a_A 13 PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMD 92 (138)
T ss_dssp TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEE
T ss_pred CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEE
Confidence 45689999999999999999999999999999853 3668999999999999999999986533 569999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCcccEEEEcc
Q 009741 83 WDIIWKSTVLGSVIVTVESEGQTGAVWYTLD 113 (527)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~l~~~~~~w~~L~ 113 (527)
++.++++++||++.+++.++......|++|.
T Consensus 93 ~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~ 123 (138)
T 3n5a_A 93 KDKLSRNDVIGKIYLSWKSGPGEVKHWKDMI 123 (138)
T ss_dssp CCSSSCCEEEEEEEESSSSCHHHHHHHHHHH
T ss_pred CCCCCCCcEEEEEEEccccCChHHHHHHHHH
Confidence 9999999999999999998754445566554
No 30
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.64 E-value=1.4e-15 Score=137.56 Aligned_cols=104 Identities=33% Similarity=0.471 Sum_probs=88.9
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEEEeeeecCCCCCeeccEEEEEecCC---CcEEEEEEEE
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYD 82 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~~~V~d 82 (527)
+..+.|.|+|++|++|+.++..|.+||||++.+.. ...+|+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 22 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d 101 (159)
T 1tjx_A 22 PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLD 101 (159)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEE
Confidence 35679999999999999999999999999999842 356899999999999999999998543 3569999999
Q ss_pred cCCCCCCceeEEEEEEcccC--------------CCcccEEEEccC
Q 009741 83 WDIIWKSTVLGSVIVTVESE--------------GQTGAVWYTLDS 114 (527)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~l--------------~~~~~~w~~L~~ 114 (527)
++.++++++||++.+++..+ +....+||+|.+
T Consensus 102 ~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 102 YDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp CCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred CCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 99999999999999999854 234567888865
No 31
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.64 E-value=1.6e-16 Score=144.74 Aligned_cols=102 Identities=18% Similarity=0.338 Sum_probs=88.7
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEEEeeeecCCCCCeeccEEEEEecCC---CcEEEEEEEEc
Q 009741 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~~~V~d~ 83 (527)
..+.|.|+|++|++|+.++..|.+||||++.+.. ..++|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 114 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDY 114 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEEC
Confidence 4678999999999999999999999999999864 577999999999999999999998542 45799999999
Q ss_pred CCCCCCceeEEEEEEcccCCCcccEEEEcc
Q 009741 84 DIIWKSTVLGSVIVTVESEGQTGAVWYTLD 113 (527)
Q Consensus 84 d~~~~d~~iG~~~i~l~~l~~~~~~w~~L~ 113 (527)
+.++++++||++.+++.+++.....|++|.
T Consensus 115 d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~ 144 (166)
T 2cm5_A 115 DIGKSNDYIGGCQLGISAKGERLKHWYECL 144 (166)
T ss_dssp CSSSCCEEEEEEEEETTCCHHHHHHHHHHH
T ss_pred CCCCCCcEEEeEEEecccCCchhHHHHHHH
Confidence 999999999999999998754455566664
No 32
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=5.1e-16 Score=138.46 Aligned_cols=105 Identities=18% Similarity=0.308 Sum_probs=88.8
Q ss_pred CCceEEEEEEEEeecCCCC-CC------CCCCCcEEEEEEC---CeEEEeeeecCCCCCeeccEEEEEecC---CCcEEE
Q 009741 11 NSAYLIKLELLAAKNLIGA-NL------NGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQII 77 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~-d~------~g~~dPyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~v~~---~~~~L~ 77 (527)
+..+.|.|+|++|++|+.. +. .+.+||||++.+. ...++|+++++++||.|||+|.|.+.. ....|.
T Consensus 23 ~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 102 (147)
T 2enp_A 23 LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLL 102 (147)
T ss_dssp TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEE
T ss_pred CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEE
Confidence 3467899999999999984 43 4589999999985 357799999999999999999999753 235799
Q ss_pred EEEEEcCCCCCCceeEEEEEEcccC--CCcccEEEEccCC
Q 009741 78 VTIYDWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (527)
Q Consensus 78 ~~V~d~d~~~~d~~iG~~~i~l~~l--~~~~~~w~~L~~~ 115 (527)
|+|||++.++++++||++.++|.++ ......|++|.++
T Consensus 103 ~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 103 LTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp EEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred EEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 9999999999999999999999998 3445789999864
No 33
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.63 E-value=3.3e-16 Score=140.68 Aligned_cols=102 Identities=19% Similarity=0.372 Sum_probs=81.9
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe---EEEeeeecCCCCCeeccEEEEEecCC---CcEEEEEEEEc
Q 009741 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC--GSE---KRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~--~~~---~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~~~V~d~ 83 (527)
..+.|.|+|++|++|+.++..|.+||||++.+ +.. +++|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~ 107 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDS 107 (153)
T ss_dssp TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeC
Confidence 46789999999999999998999999999998 433 56899999999999999999998653 25699999999
Q ss_pred CCCCCCceeEEEEEEcccCCCcccEEEEcc
Q 009741 84 DIIWKSTVLGSVIVTVESEGQTGAVWYTLD 113 (527)
Q Consensus 84 d~~~~d~~iG~~~i~l~~l~~~~~~w~~L~ 113 (527)
+.++++++||++.+++.+.......|++|.
T Consensus 108 d~~~~~~~lG~~~i~l~~~~~~~~~W~~l~ 137 (153)
T 1w15_A 108 ERGSRNEVIGRLVLGATAEGSGGGHWKEIC 137 (153)
T ss_dssp CTTSCCEEEEEEEESTTCCSHHHHHHHHHH
T ss_pred CCCCCCcEEEEEEECCCCCchHHHHHHHHH
Confidence 999999999999999998654455566664
No 34
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.62 E-value=4.1e-15 Score=147.37 Aligned_cols=149 Identities=19% Similarity=0.334 Sum_probs=112.3
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeEEEeeeecCCCCCeeccEEEEEecC---CCcEEEEEEEEcC
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWD 84 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~v~~---~~~~L~~~V~d~d 84 (527)
...+.|.|+|++|++|++++..|.+||||++.+. ....+|+++++++||.|||+|.|.+.. ....|.|+|||++
T Consensus 16 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d 95 (284)
T 2r83_A 16 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFD 95 (284)
T ss_dssp TTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECC
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECC
Confidence 3568999999999999999999999999999985 346789999999999999999999753 2467999999999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEEccCC-------CceEEEEEEEeecccCccccccCccchhcccccccccCCC
Q 009741 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP-------SGQVCLHIKTIKLPVNASRVMNGYAGANARRRASLDKQGP 155 (527)
Q Consensus 85 ~~~~d~~iG~~~i~l~~l--~~~~~~w~~L~~~-------~G~i~l~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 155 (527)
.++++++||++.++|..+ +.....|++|.+. .|++.+.+.+.+.. ..+. -.-++...+..
T Consensus 96 ~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~----~~l~-------v~v~~a~~L~~ 164 (284)
T 2r83_A 96 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTA----GKLT-------VVILEAKNLKK 164 (284)
T ss_dssp SSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETTT----TEEE-------EEEEEEESCCC
T ss_pred CCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCcC----CceE-------EEEEEeECCCC
Confidence 999999999999999998 4456789999652 36666666554211 0000 01112334444
Q ss_pred ceeccCCcccccccc
Q 009741 156 TVVHQKPGPLQTIFN 170 (527)
Q Consensus 156 ~~~~~k~~~f~~~F~ 170 (527)
++..+.+++|.++.-
T Consensus 165 ~d~~~~~dpyv~v~~ 179 (284)
T 2r83_A 165 MDVGGLSDPYVKIHL 179 (284)
T ss_dssp CSTTSCCCEEEEEEE
T ss_pred cCCCCCcCeEEEEEE
Confidence 455566777776663
No 35
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.59 E-value=1e-14 Score=145.56 Aligned_cols=151 Identities=17% Similarity=0.239 Sum_probs=111.7
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEEEeeeecCCCCCeeccEEEEEecCC---CcEEEEEEEEcC
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDWD 84 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~---~~~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~~~V~d~d 84 (527)
...+.|.|+|++|++|++++..|.+||||++.+ +.+.++|+++++++||.|||+|.|.+... ...|.|+|||+|
T Consensus 17 ~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 17 YGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFD 96 (296)
T ss_dssp SSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred CCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcC
Confidence 457899999999999999999999999999998 46678999999999999999999998532 347999999999
Q ss_pred CCCCCceeEEEEEE-cccC---CCcccEEEEccCC------CceEEEEEEEeecccCccccccCccchhcccccccccCC
Q 009741 85 IIWKSTVLGSVIVT-VESE---GQTGAVWYTLDSP------SGQVCLHIKTIKLPVNASRVMNGYAGANARRRASLDKQG 154 (527)
Q Consensus 85 ~~~~d~~iG~~~i~-l~~l---~~~~~~w~~L~~~------~G~i~l~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 154 (527)
.++++++||++.++ +.++ ......|++|.+. .|++.+.+.+.+.. + .+. -.-+++..+.
T Consensus 97 ~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~~--~------~l~---v~v~~a~~L~ 165 (296)
T 1dqv_A 97 RFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPTA--G------LLT---VTIIKASNLK 165 (296)
T ss_dssp SSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEETTT--T------EEE---EEEEEEESCC
T ss_pred CCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEecccc--c------eeE---EEEEEeecCC
Confidence 99999999999985 3333 4456789999642 37777666654211 0 000 0011233444
Q ss_pred CceeccCCcccccccccC
Q 009741 155 PTVVHQKPGPLQTIFNLL 172 (527)
Q Consensus 155 ~~~~~~k~~~f~~~F~lp 172 (527)
.++..+++++|.++.-.+
T Consensus 166 ~~d~~g~~Dpyv~v~l~~ 183 (296)
T 1dqv_A 166 AMDLTGFSDPYVKASLIS 183 (296)
T ss_dssp CCSSSSCCCEEEEECCCT
T ss_pred ccCCCCCCCcEEEEEEEe
Confidence 455566778887776443
No 36
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.56 E-value=2.1e-14 Score=153.28 Aligned_cols=111 Identities=20% Similarity=0.291 Sum_probs=96.9
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEEEeeeecCCCCCeeccEEEEEec--CCCcEEEEEEEEcCCCCCC
Q 009741 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVD--ELPVQIIVTIYDWDIIWKS 89 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~v~--~~~~~L~~~V~d~d~~~~d 89 (527)
..+.|.|+|++|++|+. |..|.+||||++.++++..+|+++++++||.|||+|.|.+. .....|.|+|||+|..++|
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~d 470 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDD 470 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCC
T ss_pred cccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCC
Confidence 36899999999999998 99999999999999998999999999999999999999853 3567799999999999999
Q ss_pred ceeEEEEEEcccCCCcccEEEEccCCCceEEEEEEEee
Q 009741 90 TVLGSVIVTVESEGQTGAVWYTLDSPSGQVCLHIKTIK 127 (527)
Q Consensus 90 ~~iG~~~i~l~~l~~~~~~w~~L~~~~G~i~l~l~~~~ 127 (527)
|+||++.++|.. .....|++|. +|.+.+.+++.-
T Consensus 471 D~LG~~~~~L~~--g~~~~~~~l~--~G~l~~~~~~~c 504 (540)
T 3nsj_A 471 DLLGSCDRSPHS--GFHEVTCELN--HGRVKFSYHAKC 504 (540)
T ss_dssp EEEEEEEECCCS--EEEEEEEECS--SSEEEEEEEEEE
T ss_pred CEEEEEEEEeeC--CcEEEEEEcC--CeEEEEEEEEEE
Confidence 999999999884 2346788875 788887777653
No 37
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.56 E-value=3.3e-14 Score=152.62 Aligned_cols=116 Identities=21% Similarity=0.339 Sum_probs=101.9
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEEEeeeecCCCCCeeccEEEEEecCCC-cEEEEEEEEcCCCCCC
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELP-VQIIVTIYDWDIIWKS 89 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~v~~~~-~~L~~~V~d~d~~~~d 89 (527)
...+.|.|+|++|++|+++|..|.+||||++.++....+|+++++++||.|+|+|.|.+.... ..|.|+|||+|.+++|
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~ 463 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPD 463 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSC
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCC
Confidence 346899999999999999999999999999999999999999999999999999999986644 5699999999999999
Q ss_pred ceeEEEEEEcccCC------CcccEEEEccC-CCceEEEEEEEe
Q 009741 90 TVLGSVIVTVESEG------QTGAVWYTLDS-PSGQVCLHIKTI 126 (527)
Q Consensus 90 ~~iG~~~i~l~~l~------~~~~~w~~L~~-~~G~i~l~l~~~ 126 (527)
++||++.+++.++. .....|++|.+ ..|++.+.+.+.
T Consensus 464 d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 464 DFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp CEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred CceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 99999999999882 22678999975 468888877765
No 38
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.55 E-value=7.5e-14 Score=121.86 Aligned_cols=84 Identities=17% Similarity=0.324 Sum_probs=72.7
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEEEeeeec-CCCCCeeccEEEEEecCCCcEEEEEEEEcCCCCCCce
Q 009741 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWKSTV 91 (527)
Q Consensus 13 ~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~-~t~nP~W~e~f~f~v~~~~~~L~~~V~d~d~~~~d~~ 91 (527)
-+.|.|+|++|++|.. .|.+||||++. .+..+|+++. +++||.|||+|.|.+......|.|+|||+| .++|++
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~ 77 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTM 77 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEEE
T ss_pred ceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCCe
Confidence 4789999999998842 68899999999 2344555554 699999999999999877778999999999 889999
Q ss_pred eEEEEEEcccC
Q 009741 92 LGSVIVTVESE 102 (527)
Q Consensus 92 iG~~~i~l~~l 102 (527)
||++.++|.++
T Consensus 78 iG~~~i~l~~l 88 (131)
T 2cjt_A 78 VGTVWIPLRTI 88 (131)
T ss_dssp EEEEEEEGGGS
T ss_pred EEEEEEEHHHh
Confidence 99999999998
No 39
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.53 E-value=4.7e-14 Score=128.34 Aligned_cols=85 Identities=16% Similarity=0.302 Sum_probs=74.0
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEEEeeeec-CCCCCeeccEEEEEecCCCcEEEEEEEEcCCCCCCc
Q 009741 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWKST 90 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~-~t~nP~W~e~f~f~v~~~~~~L~~~V~d~d~~~~d~ 90 (527)
..+.|.|+|++|++|. ..|.+||||++. .+..+|++++ ++.||.|||+|.|.+......|.|+|||+| +++|+
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd 85 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDT 85 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCE
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCc
Confidence 4679999999999874 368899999999 3345666665 699999999999999877778999999999 88999
Q ss_pred eeEEEEEEcccC
Q 009741 91 VLGSVIVTVESE 102 (527)
Q Consensus 91 ~iG~~~i~l~~l 102 (527)
+||++.|+|.++
T Consensus 86 ~iG~~~i~L~~l 97 (167)
T 2cjs_A 86 MVGTVWIPLRTI 97 (167)
T ss_dssp EEEEEEEEGGGS
T ss_pred eEEEEEEEHHHh
Confidence 999999999998
No 40
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.47 E-value=2.9e-13 Score=133.94 Aligned_cols=103 Identities=33% Similarity=0.480 Sum_probs=87.8
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---eEEEeeeecCCCCCeeccEEEEEecCC---CcEEEEEEEEc
Q 009741 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG--S---EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~--~---~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~~~V~d~ 83 (527)
..+.|.|.|++|++|+.++..|.+||||++.+. + ..++|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 457899999999999999999999999999973 2 356899999999999999999998653 34699999999
Q ss_pred CCCCCCceeEEEEEEcccC--------------CCcccEEEEccC
Q 009741 84 DIIWKSTVLGSVIVTVESE--------------GQTGAVWYTLDS 114 (527)
Q Consensus 84 d~~~~d~~iG~~~i~l~~l--------------~~~~~~w~~L~~ 114 (527)
+.++++++||++.+++..+ +....+|++|.+
T Consensus 228 d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 228 DKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp CSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred CCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 9999999999999999864 234567888865
No 41
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.42 E-value=2.6e-12 Score=111.21 Aligned_cols=112 Identities=14% Similarity=0.249 Sum_probs=91.9
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEEEeeeec-CCCCCeeccEEEEEecC---CCcEEEEEEEEcCCC
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDE---LPVQIIVTIYDWDII 86 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~-~t~nP~W~e~f~f~v~~---~~~~L~~~V~d~d~~ 86 (527)
.+...|+|.|.+|.+|+ |++|||+.+.+.+.+++|+++. ++.||.|||.|++++.. ....|.|.|+|++.+
T Consensus 18 ~~~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v 92 (144)
T 3l9b_A 18 GSHMALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV 92 (144)
T ss_dssp -CCEEEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT
T ss_pred CCcEEEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc
Confidence 45678999999999997 5899999999999999999998 69999999999999753 355699999999999
Q ss_pred CCCceeEEEEEEcccC--CCcccEEEEccCCC-----ceEEEEEEEee
Q 009741 87 WKSTVLGSVIVTVESE--GQTGAVWYTLDSPS-----GQVCLHIKTIK 127 (527)
Q Consensus 87 ~~d~~iG~~~i~l~~l--~~~~~~w~~L~~~~-----G~i~l~l~~~~ 127 (527)
+++++||++.++|.++ ......+.+|.... +.|++.|.+.+
T Consensus 93 ~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~p 140 (144)
T 3l9b_A 93 FSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQA 140 (144)
T ss_dssp SCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecC
Confidence 9999999999999998 33344566665433 45566666664
No 42
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.41 E-value=2.3e-12 Score=140.58 Aligned_cols=106 Identities=21% Similarity=0.303 Sum_probs=92.4
Q ss_pred CceEEEEEEEEeecCCCCCC--CCCCCcEEEEEECC-----eEEEeeeecCC-CCCeeccEEEEEecCCC-cEEEEEEEE
Q 009741 12 SAYLIKLELLAAKNLIGANL--NGTSDPYAIITCGS-----EKRFSSMVPGS-RYPMWGEEFNFSVDELP-VQIIVTIYD 82 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~--~g~~dPyv~v~~~~-----~~~~T~~~~~t-~nP~W~e~f~f~v~~~~-~~L~~~V~d 82 (527)
..+.|.|+|++|++|+..+. .+.+||||++.+.+ .+.+|++++++ +||.|||+|.|.+..+. ..|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 57899999999999998874 78999999999833 67899999997 99999999999987643 569999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCcccEEEEccCCCce
Q 009741 83 WDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ 118 (527)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~l~~~~~~w~~L~~~~G~ 118 (527)
+|..+++++||++.++|..+..+ .+|++|....|+
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G-~r~v~L~d~~g~ 609 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG-YRHVHLLSKNGD 609 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE-EEEEEEECTTSC
T ss_pred cCCCCCCceeEEEEEEHHHcCCC-cEEEeCCCCCcC
Confidence 99999999999999999999654 579999765555
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.40 E-value=5.4e-13 Score=146.78 Aligned_cols=103 Identities=20% Similarity=0.370 Sum_probs=92.4
Q ss_pred CCceEEEEEEEEeecCCC---CCCCCCCCcEEEEEEC---CeEEEeeeecCCCCCeeccEEEEEecC-CCcEEEEEEEEc
Q 009741 11 NSAYLIKLELLAAKNLIG---ANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE-LPVQIIVTIYDW 83 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~---~d~~g~~dPyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~v~~-~~~~L~~~V~d~ 83 (527)
...+.|.|+|++|++|++ +|..|.+||||++.+. ..+++|+++++++||.|||+|.|.+.. ....|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 457899999999999998 7888999999999987 467899999999999999999999976 456799999999
Q ss_pred CCCCCCceeEEEEEEcccC--CCcccEEEEccC
Q 009741 84 DIIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (527)
Q Consensus 84 d~~~~d~~iG~~~i~l~~l--~~~~~~w~~L~~ 114 (527)
|.++ |++||++.++|.++ +.....|++|.+
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred CCCC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 9998 99999999999998 445689999986
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.36 E-value=1.7e-13 Score=136.62 Aligned_cols=101 Identities=27% Similarity=0.407 Sum_probs=85.2
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeEEEeeeecCCCCCeeccEEEEEecCC---CcEEEEEEEEc
Q 009741 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~-----~~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~~~V~d~ 83 (527)
..+.|.|.|++|++|+.++..|.+||||++++. ..+++|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 468899999999999999999999999999985 2467899999999999999999988653 34699999999
Q ss_pred CCCCCCceeEEEEEEcccCCC-cccEEEEc
Q 009741 84 DIIWKSTVLGSVIVTVESEGQ-TGAVWYTL 112 (527)
Q Consensus 84 d~~~~d~~iG~~~i~l~~l~~-~~~~w~~L 112 (527)
+.++++++||.+.|++..+.. ....|+.+
T Consensus 230 d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~ 259 (296)
T 1dqv_A 230 DCIGHNEVIGVCRVGPEAADPHGREHWAEM 259 (296)
T ss_dssp CSSSCCEEEEECCCSSCTTCHHHHHHHHTS
T ss_pred CCCCCCceEEEEEECCccCCchhHHHHHHH
Confidence 999999999999999987743 33344443
No 45
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.22 E-value=1.2e-12 Score=139.15 Aligned_cols=98 Identities=21% Similarity=0.294 Sum_probs=14.8
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe-EEEeeeecCC---CCCeeccEEEEEecCCCcEEEEEEEEc-C-
Q 009741 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSE-KRFSSMVPGS---RYPMWGEEFNFSVDELPVQIIVTIYDW-D- 84 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~~-~~~T~~~~~t---~nP~W~e~f~f~v~~~~~~L~~~V~d~-d- 84 (527)
...+.|.|+|++|++|++++ ||||.+.+++. ..+|++++++ +||.|||+|.|.+......|.|+|||. |
T Consensus 8 r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~ 82 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDK 82 (483)
T ss_dssp EEEECC--------------------------------------------------CCEECC------------------
T ss_pred eeccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCc
Confidence 34678999999999998876 99999998765 4589999999 999999999998654457799999994 4
Q ss_pred --CCCCCceeEEEEEEcccC--CCcccEEEEcc
Q 009741 85 --IIWKSTVLGSVIVTVESE--GQTGAVWYTLD 113 (527)
Q Consensus 85 --~~~~d~~iG~~~i~l~~l--~~~~~~w~~L~ 113 (527)
..+++++||++.|++..+ +...+.||+|.
T Consensus 83 ~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~ 115 (483)
T 3bxj_A 83 KRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVT 115 (483)
T ss_dssp ------------------------CCEECC---
T ss_pred cccCCCCceEEEEEEEHHHhcCCCCCCeEEECC
Confidence 367899999999999998 45567899994
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.17 E-value=4e-11 Score=132.89 Aligned_cols=102 Identities=27% Similarity=0.494 Sum_probs=90.4
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEEEeeeecCCCCCeeccEEEEEecC--CCcEEEEEEEEcCC
Q 009741 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSVDE--LPVQIIVTIYDWDI 85 (527)
Q Consensus 13 ~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~v~~--~~~~L~~~V~d~d~ 85 (527)
.+.|.|.|++|++|.++|..|.+||||++.+ ...+.+|+++++++||.|||+|.|.+.. ....|.|+|||+|.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 4678999999999999999999999999998 4456799999999999999999999753 34569999999999
Q ss_pred CCCCceeEEEEEEcccC-CCcccEEEEccC
Q 009741 86 IWKSTVLGSVIVTVESE-GQTGAVWYTLDS 114 (527)
Q Consensus 86 ~~~d~~iG~~~i~l~~l-~~~~~~w~~L~~ 114 (527)
.++|++||.+.+++.++ ....+.|+.|..
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~~~~w~~Lls 280 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAGVDGWFKLLS 280 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCCEEEEEECBC
T ss_pred ccccccccccccchhhhccCCcccceeecc
Confidence 99999999999999998 444688999975
No 47
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.98 E-value=4.1e-09 Score=117.20 Aligned_cols=106 Identities=16% Similarity=0.218 Sum_probs=84.3
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-------eEEEeeeecC-CCCCeeccE-EEEE-ecCCC-cEEEEEEE
Q 009741 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-------EKRFSSMVPG-SRYPMWGEE-FNFS-VDELP-VQIIVTIY 81 (527)
Q Consensus 13 ~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~-------~~~~T~~~~~-t~nP~W~e~-f~f~-v~~~~-~~L~~~V~ 81 (527)
.+.|.|+|++|++|+. ..+||||++.+.+ .+++|+++++ ++||.|||+ |.|. +..+. ..|+|.||
T Consensus 649 ~~~L~V~Visaq~L~~----~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSD----KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCS----SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCC----CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 5789999999999975 3689999999743 5678999976 599999998 9998 75433 46999999
Q ss_pred EcCCCCCCceeEEEEEEcccCCCcccEEEEccCCCce------EEEEEEEee
Q 009741 82 DWDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ------VCLHIKTIK 127 (527)
Q Consensus 82 d~d~~~~d~~iG~~~i~l~~l~~~~~~w~~L~~~~G~------i~l~l~~~~ 127 (527)
|++ ++|||++.++|+.+..+ .++++|..+.|+ +.++|.+..
T Consensus 725 D~d----ddfiG~~~ipL~~L~~G-yR~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 725 EEN----GKFIGHRVMPLDGIKPG-YRHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp ETT----SCEEEEEEEESTTCCCE-EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred ecC----CCeeeEEEEEHHHcCCc-ceEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 985 78999999999999765 568888765544 445555553
No 48
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.95 E-value=1.7e-08 Score=84.85 Aligned_cols=108 Identities=13% Similarity=0.208 Sum_probs=84.0
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeE----EEe-eeecCCCCCeeccEEEEEecCCCcEEEEEEEEcCCCC
Q 009741 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEK----RFS-SMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIW 87 (527)
Q Consensus 13 ~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~~~----~~T-~~~~~t~nP~W~e~f~f~v~~~~~~L~~~V~d~d~~~ 87 (527)
...|+|.+.++.--..+......||||.+.++... .+| ...++|..|.||++|.-.+.+ .+.|.|.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRAAE-- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEETT--
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcCCC--
Confidence 46788888776532222233468999999986433 244 667889999999999999987 8899999997554
Q ss_pred CCceeEEEEEEcccCC-------CcccEEEEccCCCceEEEEEEEe
Q 009741 88 KSTVLGSVIVTVESEG-------QTGAVWYTLDSPSGQVCLHIKTI 126 (527)
Q Consensus 88 ~d~~iG~~~i~l~~l~-------~~~~~w~~L~~~~G~i~l~l~~~ 126 (527)
+|++.++|.+.++. ...+.|++|.| .|++++.+++.
T Consensus 82 --~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP-~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 --EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP-QAKVLMSVQYF 124 (126)
T ss_dssp --EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS-SCEEEEEEEEE
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-CcEEEEEEEEe
Confidence 89999999999882 34578999997 89999998876
No 49
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.94 E-value=4.8e-09 Score=117.33 Aligned_cols=105 Identities=15% Similarity=0.243 Sum_probs=83.0
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEEEeeeecC-CCCCeecc-EEEEE-ecCC-CcEEEEEEEE
Q 009741 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPG-SRYPMWGE-EFNFS-VDEL-PVQIIVTIYD 82 (527)
Q Consensus 13 ~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~~~~-t~nP~W~e-~f~f~-v~~~-~~~L~~~V~d 82 (527)
...|.|+|++|++|+. ..+||||+|.+.+ .+++|+++.+ ++||.||| +|.|. +..+ -..|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~----~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSD----RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCcc----cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 4689999999999975 3689999999743 2468999976 59999999 69998 6543 3469999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCcccEEEEccCCCc------eEEEEEEEe
Q 009741 83 WDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSG------QVCLHIKTI 126 (527)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~l~~~~~~w~~L~~~~G------~i~l~l~~~ 126 (527)
+| ++|||++.++|..+..+ .++++|..+.| .+.++|.+.
T Consensus 800 ~d----ddfiG~~~lpL~~L~~G-yR~vpL~~~~g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRSG-YHYVCLRNEANQPLCLPALLIYTEAS 844 (885)
T ss_dssp TT----TEEEEEEEEETTTCCCE-EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred CC----ccEEeeEEEEHHHcCCC-ceEEEecCCCCCccCceEEEEEEEEE
Confidence 87 78999999999999764 56788876554 345555555
No 50
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.93 E-value=1.2e-08 Score=86.81 Aligned_cols=115 Identities=10% Similarity=0.213 Sum_probs=88.5
Q ss_pred CCCCceEEEEEEEEeecCCCCC-CCCCCCcEEEEEECCeE----EEe-eeecCCCCCeeccEEEEEecCCCcEEEEEEEE
Q 009741 9 QTNSAYLIKLELLAAKNLIGAN-LNGTSDPYAIITCGSEK----RFS-SMVPGSRYPMWGEEFNFSVDELPVQIIVTIYD 82 (527)
Q Consensus 9 ~~~~~g~L~V~vi~A~~L~~~d-~~g~~dPyv~v~~~~~~----~~T-~~~~~t~nP~W~e~f~f~v~~~~~~L~~~V~d 82 (527)
++.-...|+|.+.++.-.+.+. .....||||.+.++... .+| ...++|..|.||++|.-.+.+ .+.|.|.|++
T Consensus 5 ~~~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh 83 (138)
T 2enj_A 5 SSGMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKG 83 (138)
T ss_dssp CSSCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEEC
T ss_pred ccccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEc
Confidence 3445678899987776433222 13368999999986432 456 666779999999999999887 8889999996
Q ss_pred cCCCCCCceeEEEEEEcccCC-------CcccEEEEccCCCceEEEEEEEeecc
Q 009741 83 WDIIWKSTVLGSVIVTVESEG-------QTGAVWYTLDSPSGQVCLHIKTIKLP 129 (527)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~l~-------~~~~~w~~L~~~~G~i~l~l~~~~~~ 129 (527)
... +|++.++|.+.+|. ...+.|++|.| .|++++.+++..+.
T Consensus 84 ~a~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP-~Gkl~v~i~~~~e~ 132 (138)
T 2enj_A 84 KNV----DLISETTVELYSLAERCRKNNGKTEIWLELKP-QGRMLMNARYFLEM 132 (138)
T ss_dssp SSC----SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS-SCEEEEEEEECCCS
T ss_pred CCC----CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-CcEEEEEEEEEEec
Confidence 444 89999999999882 34578999997 89999999987443
No 51
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.88 E-value=9.6e-09 Score=114.74 Aligned_cols=98 Identities=16% Similarity=0.212 Sum_probs=79.7
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEEEee-eecC-CCCCeecc-EEEE-EecCC-CcEEEEEE
Q 009741 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSS-MVPG-SRYPMWGE-EFNF-SVDEL-PVQIIVTI 80 (527)
Q Consensus 12 ~~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~~~------~~~~T~-~~~~-t~nP~W~e-~f~f-~v~~~-~~~L~~~V 80 (527)
..+.|.|+|++|++|+. +.+||||++.+.+ ++++|+ ++++ ++||.||| +|.| .+..+ -..|+|.|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 46799999999999975 4689999999832 357899 8865 69999999 6999 77543 34699999
Q ss_pred EEcCCCCCCceeEEEEEEcccCCCcccEEEEccCCCce
Q 009741 81 YDWDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ 118 (527)
Q Consensus 81 ~d~d~~~~d~~iG~~~i~l~~l~~~~~~w~~L~~~~G~ 118 (527)
||++ +++||++.++|..+..+ .+|++|....|.
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~G-~r~v~L~~~~g~ 784 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNSG-YHHLCLHSESNM 784 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCCE-EEEEEEECTTCC
T ss_pred EEeC----CCccceEeeehhhcCCC-cEEEeccCCCCC
Confidence 9986 78999999999999654 678999765554
No 52
>2hth_B Vacuolar protein sorting protein 36; GLUE domain, PH domain, viral budding, ubiquitin complex, protein transport; 2.70A {Homo sapiens} SCOP: b.55.1.12 PDB: 2dx5_A
Probab=93.53 E-value=0.78 Score=39.40 Aligned_cols=90 Identities=14% Similarity=0.169 Sum_probs=54.3
Q ss_pred cceeEEeecceEEEEeccCCceeEEEEecccceeeeecccccccCcEEEEEecCCCCCCC-CCCCCCCCceeEEEeeeec
Q 009741 191 YHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGV-PPLGSPDGRVRYKFASFWN 269 (527)
Q Consensus 191 ~~Gr~yis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~~~~~~~~~~-~~~~~~~~~~~~~f~sf~~ 269 (527)
-.|++|+|.+.|||....- ....+.|||..|..++..... +..+.+|++...+...+. ++-.+..+ ..++-.||-.
T Consensus 38 k~G~l~LTshRli~~d~~~-~~~s~~lpl~~v~~~e~~~~~-f~~s~Ki~l~l~~~~~~~~~gp~~~s~-~~~~kLsFr~ 114 (140)
T 2hth_B 38 DAGTLLLSTHRLIWRDQKN-HECCMAILLSQIVFIEEQAAG-IGKSAKIVVHLHPAPPNKEPGPFQSSK-NSYIKLSFKE 114 (140)
T ss_dssp CCEEEEEESSEEEEEETTC-CSCCEEEEGGGEEEEEEECCT-TSSCCEEEEEECCCCCCSSSCCCSTTS-CCEEEEEETT
T ss_pred cCCEEEEecCEEEEecCCC-CceEEEEEhHHeeeeeeeccc-cccCceEEEEecCCCccCCCCCccccc-CcEEEEEEcC
Confidence 4799999999999976543 457899999999999999875 333444444433211110 01111122 3455556643
Q ss_pred --hHHHHHHHHHHHHh
Q 009741 270 --RNHALRQLQRTAKN 283 (527)
Q Consensus 270 --r~~~~~~l~~~~~~ 283 (527)
.++-+..|.+.++.
T Consensus 115 Gg~~eF~~~L~~al~~ 130 (140)
T 2hth_B 115 HGQIEFYRRLSEEMTQ 130 (140)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHH
Confidence 35555666666554
No 53
>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12
Probab=92.81 E-value=0.51 Score=40.82 Aligned_cols=85 Identities=15% Similarity=0.170 Sum_probs=56.3
Q ss_pred ccceeEEeecceEEEEeccCCceeEEEEecccceeeeecccccccCcEEEEEecCCCCCCCCCCCCCCCceeEEEeeeec
Q 009741 190 LYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWN 269 (527)
Q Consensus 190 ~~~Gr~yis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~f~sf~~ 269 (527)
.-.|++|+|...|||-...-.....|.+||..|.+++.....+ ..++.|++...++.. .....++.|.+--.
T Consensus 50 ~k~G~lyLTshRIIyv~~~~~~~~SfslPL~~v~~~e~~~~~f-g~s~Ki~l~~~p~~~-------~~~~~KLsFk~GGa 121 (145)
T 2cay_A 50 RQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGFL-TRSPRLILFFKDPSS-------STEFVQLSFRKSDG 121 (145)
T ss_dssp CSSEEEEEESSEEEEEESSCHHHHCEEEEGGGEEEEEEECSSS-SSSCEEEEEESSCSS-------TTCCEEEEESSSCC
T ss_pred CCccEEEEEcCeEEEecCCCCcceEEEeEhHheeeeeEEcCcc-ccCceEEEEecCCCC-------CceEEEEEEcCCCc
Confidence 3479999999999998655433478999999999999987653 335666655432211 12345555555443
Q ss_pred hHHHHHHHHHHHHh
Q 009741 270 RNHALRQLQRTAKN 283 (527)
Q Consensus 270 r~~~~~~l~~~~~~ 283 (527)
++-+..|.+.+++
T Consensus 122 -~eF~~~l~~al~~ 134 (145)
T 2cay_A 122 -VLFSQATERALEN 134 (145)
T ss_dssp -HHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHH
Confidence 5556666666655
No 54
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=91.04 E-value=2.4 Score=39.32 Aligned_cols=71 Identities=10% Similarity=-0.025 Sum_probs=44.4
Q ss_pred CCCeEEEEEeeeeCCCCCCC-eEE---EEEEEEEEeec--CCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHHHH
Q 009741 421 DKKIFVFETVQQAHDVPFGS-YFE---IHGRWHLETIA--ENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVE 494 (527)
Q Consensus 421 ~~~~~vi~~~~~~~dvPygd-~F~---v~~r~~i~~~~--~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~ 494 (527)
++.++++..+..-+.+|-.. +=+ ..+.|+|++.+ +++|++... +.++..+|. -+.++.+.+.......+.
T Consensus 142 ~~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~---~~~Dp~G~i-P~~l~n~~~~~~~~~~~~ 217 (229)
T 1em2_A 142 RDRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVCTFVWI---LNTDLKGRL-PRYLIHQSLAATMFEFAF 217 (229)
T ss_dssp SSEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSSCTTCEEEEEE---ECEECCSSS-CHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecCCCCCcEEEEEE---EEECCCCCC-CHHHHHHHHHHHHHHHHH
Confidence 44566666666677788543 223 34689999976 578999988 888887652 244455544444444333
Q ss_pred H
Q 009741 495 L 495 (527)
Q Consensus 495 ~ 495 (527)
.
T Consensus 218 ~ 218 (229)
T 1em2_A 218 H 218 (229)
T ss_dssp H
T ss_pred H
Confidence 3
No 55
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=90.86 E-value=1.4 Score=40.76 Aligned_cols=146 Identities=10% Similarity=0.055 Sum_probs=77.1
Q ss_pred eeeeeecCHHHHHHHhcCCCCchHHHHHHHcCCcceEeccceecCCCCCeEEEEEEEE-ec--CCCCCCcceeEeEEEEE
Q 009741 340 YNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRS-LC--KSPIYPRDTAMTESQHA 416 (527)
Q Consensus 340 ~~~~~~~s~~~~f~~lf~d~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~-~~--~~~~gpk~~~~~~~Q~~ 416 (527)
+..+++++++++|++|+.| ... +..+|-.+...+.-+..+..+ .+.|.. +- ..++.|+.--+ ....
T Consensus 59 ~~~~v~~~~~~v~~~l~~d-~~~-------r~~Wd~~~~~~~vle~~~~~t-~I~y~~~~~~~~~~v~~RDfv~--~r~~ 127 (221)
T 3p0l_A 59 LEVVVDQPMERLYEELVER-MEA-------MGEWNPNVKEIKVLQKIGKDT-FITHELAAEAAGNLVGPRDFVS--VRCA 127 (221)
T ss_dssp EEEEESSCHHHHHHHHTTT-GGG-------TTTSCTTCSEEEEEEECSSSE-EEEEEEECC---CCSCCEEEEE--EEEE
T ss_pred EEEEEcCCHHHHHHHHHhc-cch-------hhhcCcchheEEEEEecCCCe-EEEEEeeccccCCccCCceEEE--EEEE
Confidence 3467899999999999853 211 222221122222211111223 344543 21 12344443221 1112
Q ss_pred EEcCCCCeEEEEEeeeeCCCCCC-CeEEE---EEEEEEEeecCC--ceEEEEEEeeeeEEEeecceeeeeeehhhHHHHH
Q 009741 417 VLSPDKKIFVFETVQQAHDVPFG-SYFEI---HGRWHLETIAEN--SSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYK 490 (527)
Q Consensus 417 ~~~~~~~~~vi~~~~~~~dvPyg-d~F~v---~~r~~i~~~~~~--~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~ 490 (527)
.. .++.++++......+.+|-. ++-++ ...|+|++.+++ +|+|... ..++..+| +-++++.+.+.....
T Consensus 128 ~~-~~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~---~~~Dp~G~-iP~~lvn~~~~~~~~ 202 (221)
T 3p0l_A 128 KR-RGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWL---LSIDLKGW-LPKSIINQVLSQTQV 202 (221)
T ss_dssp EE-CSSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETTEEEEEEEEEE---ECEECCSS-CCHHHHHHHHHHHHH
T ss_pred EE-cCCeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCCCCCcEEEEEE---EEecCCCC-CCHHHHHHHHHHHHH
Confidence 22 34556666566666777763 44344 467999999866 8999998 88887665 234444444333333
Q ss_pred HHHHHHHHHHHHHHh
Q 009741 491 KEVELMLETARSYIK 505 (527)
Q Consensus 491 ~~~~~~~~~~~~~l~ 505 (527)
..++.+++.++
T Consensus 203 ----~~~~~Lr~~~~ 213 (221)
T 3p0l_A 203 ----DFANHLRKRLE 213 (221)
T ss_dssp ----HHHHHHHHHTC
T ss_pred ----HHHHHHHHHHh
Confidence 45555555555
No 56
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=90.23 E-value=7.6 Score=33.29 Aligned_cols=143 Identities=12% Similarity=0.042 Sum_probs=74.2
Q ss_pred cceeeeeeeecCHHHHHHHhcCCCCchHHHHHHHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEE
Q 009741 336 LVGIYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQH 415 (527)
Q Consensus 336 ~~~~~~~~~~~s~~~~f~~lf~d~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~ 415 (527)
|+.-.+.+++.|++++|.++-+ ...+.++.- +...+. ..++ +.. .+... ..+||-.......-+
T Consensus 3 m~i~~~~~i~ap~e~Vw~~l~D--~e~~~~w~p--~~~~~~-----~~~~-~~~----~~~~~--~~~g~~~~~~~~~~~ 66 (162)
T 2pcs_A 3 LNGNGSIELKGTVEEVWSKLMD--PSILSKCIM--GCKSLE-----LIGE-DKY----KADLQ--IGIAAVKGKYDAIIE 66 (162)
T ss_dssp CEEEEEEEEESCHHHHHHHHTC--HHHHHHHST--TEEEEE-----EEET-TEE----EEEEE--ECCGGGCEEEEEEEE
T ss_pred EEEeeEEEecCCHHHHHHHhcC--HHHHHhhCC--CceEeE-----EeCC-CeE----EEEEE--EEeeeEEEEEEEEEE
Confidence 3445667999999999999843 333444432 222221 1111 221 12221 224543333322223
Q ss_pred E-EEcCCCCeEEEEEeeeeCCCCCCCeEEEEEEEEEEeecCCceEEEEEEeeeeEEEeec--ceeeeeeehhhHHHHHHH
Q 009741 416 A-VLSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKW--CVIQFKIKTGAVNKYKKE 492 (527)
Q Consensus 416 ~-~~~~~~~~~vi~~~~~~~dvPygd~F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~--t~~K~~Ie~~~~~~~~~~ 492 (527)
+ ...+ ...+.+.....-. +..+.....|.|+..++++|+|.+. ..+.+... .++..++.. -..+.
T Consensus 67 ~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~gT~v~~~---~~~~~~g~l~~~~~~l~~~----~~~~~ 134 (162)
T 2pcs_A 67 VTDIKP-PYHYKLLVNGEGG----PGFVNAEGVIDLTPINDECTQLTYT---YSAEVGGKVAAIGQRMLGG----VAKLL 134 (162)
T ss_dssp EEEEET-TTEEEEEEEEEET----TEEEEEEEEEEEEESSSSEEEEEEE---EEEEEESGGGGGCHHHHHH----HHHHH
T ss_pred EEecCC-CcEEEEEEEecCC----CccEEEEEEEEEEecCCCcEEEEEE---EEEEECCCHHHhhHHHHHH----HHHHH
Confidence 3 2333 3466665553321 3345678899999876778999998 88877541 222222222 12334
Q ss_pred HHHHHHHHHHHHhh
Q 009741 493 VELMLETARSYIKI 506 (527)
Q Consensus 493 ~~~~~~~~~~~l~~ 506 (527)
++.+++.+++.+..
T Consensus 135 ~~~~~~~lk~~~e~ 148 (162)
T 2pcs_A 135 ISDFFKKIQKEIAK 148 (162)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc
Confidence 45556666665543
No 57
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=90.08 E-value=4.7 Score=35.02 Aligned_cols=144 Identities=15% Similarity=0.126 Sum_probs=80.7
Q ss_pred eeeeeecCHHHHHHHhcCCCCchHHHHH-HHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEEEE
Q 009741 340 YNDVFPCTAEQFFTLLFSDDSKFTNEYR-AARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAVL 418 (527)
Q Consensus 340 ~~~~~~~s~~~~f~~lf~d~s~f~~~~~-~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~~ 418 (527)
.+.+.++|+++||+++..|...++.+.+ ...+..++ .+.|. .+..|.++|.. -||. . ..+++++.
T Consensus 8 ~E~~~~v~a~kl~ka~v~d~~~l~Pk~~P~~iks~~v-eGdg~-----~Gsir~~t~~~-----g~~~-~--~~kErle~ 73 (154)
T 2wql_A 8 LEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDGG-----AGTVRIITLPE-----GSPI-T--TMTVRTDA 73 (154)
T ss_dssp EEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSSS-----TTCEEEEECCT-----TCSC-C--EEEEEEEE
T ss_pred EEEEecCCHHHHHHHHhhcccccchhhcccceeEEEE-ECCCC-----CCeEEEEEEcC-----CCCc-e--EEEEEEEE
Confidence 3567889999999999876444555544 23333332 33332 36789888732 2332 1 23466664
Q ss_pred c-CCCCeEEEEEeeeeCCCCCCCeEEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHHHHHHH
Q 009741 419 S-PDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVELML 497 (527)
Q Consensus 419 ~-~~~~~~vi~~~~~~~dvPygd~F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~ 497 (527)
. +++..|. .+..--|+....+=+......+.+.++++|.++.. +.|.+-. -..+.-...+..++....++
T Consensus 74 iD~~~~~~~--y~iieGd~l~~~~~~~~~~ikv~p~~~ggsvvk~t-----~~Y~~~~--~~~~~ee~~~~~~~~~~~~~ 144 (154)
T 2wql_A 74 VNKEALSYD--STVIDGDILLGFIESIETHMVVVPTADGGSITKTT-----AIFHTKG--DAVVPEENIKFADAQNTALF 144 (154)
T ss_dssp EETTTTEEE--EEEEESGGGTTTEEEEEEEEEEEECTTSCEEEEEE-----EEEEEST--TCCCCHHHHHHHHHHHHHHH
T ss_pred EehhhCEEE--EEEEeccccccceEEEEEEEEEeeCCCCcEEEEEE-----EEEEECC--CCCCCHHHHHHHHHHHHhHH
Confidence 3 3333333 33333444433344455677778888888876655 4455421 11233333445566677788
Q ss_pred HHHHHHHhh
Q 009741 498 ETARSYIKI 506 (527)
Q Consensus 498 ~~~~~~l~~ 506 (527)
+.++.+|-.
T Consensus 145 KaiEayLla 153 (154)
T 2wql_A 145 KAIEAYLIA 153 (154)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 888888754
No 58
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=88.65 E-value=5.7 Score=36.06 Aligned_cols=120 Identities=12% Similarity=0.091 Sum_probs=65.6
Q ss_pred eeeeeee-cCHHHHHHHhcCCCCchHHHHHHHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEEE
Q 009741 339 IYNDVFP-CTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAV 417 (527)
Q Consensus 339 ~~~~~~~-~s~~~~f~~lf~d~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~ 417 (527)
-...+++ ++++++|+++.. .....++........+. .. + + ...+.+......|+.++.- |.......
T Consensus 55 k~~~~i~~~~~~~v~~~l~d--~~~r~~Wd~~~~~~~vl----e~--~-~--~~i~~~~~~~p~p~~~RD~-v~~~~~~~ 122 (214)
T 1ln1_A 55 KVFGVLEDCSPTLLADIYMD--SDYRKQWDQYVKELYEQ----EC--N-G--ETVVYWEVKYPFPMSNRDY-VYLRQRRD 122 (214)
T ss_dssp EEEEEETTSCHHHHHHHHHC--HHHHHHHCTTEEEEEEE----EE--T-T--EEEEEEEECCCTTSCCEEE-EEEEEEEE
T ss_pred EEEEEECCCCHHHHHHHHcC--HHHHHHHHHHHhhEEEe----cc--C-C--CEEEEEEEEcCCCCCCceE-EEEEEEEe
Confidence 4567895 999999999875 23333322222222221 11 1 3 2233333333234544332 22212122
Q ss_pred EcCCCC-e-EEEEEeeeeCCCCCCCeE----EEEEEEEEEeecCCceEEEEEEeeeeEEEee
Q 009741 418 LSPDKK-I-FVFETVQQAHDVPFGSYF----EIHGRWHLETIAENSSTIDIKVVSAGAHFKK 473 (527)
Q Consensus 418 ~~~~~~-~-~vi~~~~~~~dvPygd~F----~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K 473 (527)
..+++. . +++.....-+++|-...| .....|+|++.++++|++... ..++...
T Consensus 123 ~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~~~t~v~~~---~~~Dp~G 181 (214)
T 1ln1_A 123 LDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGKKGSKVFMY---YFDNPGG 181 (214)
T ss_dssp ECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSSSSEEEEEE---EEECCSS
T ss_pred cccCCCeEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCCCceEEEEE---EEECCCC
Confidence 223443 3 455556666778753333 356789999998899999998 8887764
No 59
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=88.02 E-value=2.8 Score=37.40 Aligned_cols=144 Identities=10% Similarity=0.058 Sum_probs=72.3
Q ss_pred eeeeeeecCHHHHHHHhcCCCCchHHHHHHHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEEEE
Q 009741 339 IYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAVL 418 (527)
Q Consensus 339 ~~~~~~~~s~~~~f~~lf~d~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~~ 418 (527)
-...+++.|++++|+++.. .....++...+....+.. . ++ + ...+.+......|+.++. .........
T Consensus 30 k~~~~v~~s~~~v~~~l~D--~~~~~~W~~~~~~~~vle----~-~~--~-~~i~y~~~~~p~p~~~RD--~v~~~~~~~ 97 (189)
T 3qsz_A 30 RGEVRLKAAADDVVKVLRD--ANAFRQWMPDVAASELLK----A-TD--T-EQYHYLDNSAPWPVSNRD--GVYHFTYEK 97 (189)
T ss_dssp EEEEEESSCHHHHHHHHHC--GGGGGGTSTTEEEEEEEE----E-CS--S-EEEEEEEECCSSSCCCEE--EEEEEEEEE
T ss_pred EEEEEEECCHHHHHHHHHh--HHHhhhHHHhcCEEEEEe----e-cC--C-ceEEEEEeecCCCcCCcc--eEEEEEEEE
Confidence 4467889999999998754 333333222222222211 1 11 1 222222222212333332 222222333
Q ss_pred cCCCCeEEEEEeeeeCCCCCCCe----EEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHHHH
Q 009741 419 SPDKKIFVFETVQQAHDVPFGSY----FEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVE 494 (527)
Q Consensus 419 ~~~~~~~vi~~~~~~~dvPygd~----F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~ 494 (527)
..++ .++|......+.+|-... ......|+|++ ++++|++... +.++...+ +.+.++.+.+.......++
T Consensus 98 ~~~g-~~~i~~~~~~~~~P~~~~~VR~~~~~~~~~i~p-~~~~t~vt~~---~~~dp~G~-iP~~lvn~~~~~~~~~~l~ 171 (189)
T 3qsz_A 98 AGDG-AITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVP-DADGVDVTYQ---MHASPGGS-IPSWLANQTVVETPFGTLK 171 (189)
T ss_dssp CTTS-CEEEEEEECTTSSCCCTTSEECCCEEEEEEEEE-CSSSEEEEEE---EEECSCSS-SCHHHHHHTTTHHHHHHHH
T ss_pred CCCC-eEEEEEEcCCCccCCCCCeEEeeEeeEEEEEEE-CCCeEEEEEE---EEeCCCCC-CCHHHHHHHHHHHHHHHHH
Confidence 3344 455555544455664322 23468899999 8889999999 88887652 2244444444444444444
Q ss_pred HHHHHH
Q 009741 495 LMLETA 500 (527)
Q Consensus 495 ~~~~~~ 500 (527)
.+-+.+
T Consensus 172 ~L~k~~ 177 (189)
T 3qsz_A 172 ALRSHL 177 (189)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 433333
No 60
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=86.60 E-value=17 Score=33.36 Aligned_cols=148 Identities=10% Similarity=0.021 Sum_probs=74.8
Q ss_pred eeeeeeecCHHHHHHHh--cCCCCchHHHHHHHcCCcceEeccceecCCCCCeEEEEEEEEecC---CCCCCcceeEeEE
Q 009741 339 IYNDVFPCTAEQFFTLL--FSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCK---SPIYPRDTAMTES 413 (527)
Q Consensus 339 ~~~~~~~~s~~~~f~~l--f~d~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~---~~~gpk~~~~~~~ 413 (527)
-...+++++++++|+++ +. .....++-.......+. +..++ .+ .+.|..... .++.|+.- ...
T Consensus 70 k~~~~v~~~~~~v~~~l~~~d--~~~r~~Wd~~~~~~~vl----e~i~~---~~-~i~~~~~~~~~~~~v~~RDf--v~~ 137 (231)
T 2r55_A 70 RGEGIVYGTLEEVWDCVKPAV--GGLRVKWDENVTGFEII----QSITD---TL-CVSRTSTPSAAMKLISPRDF--VDL 137 (231)
T ss_dssp EEEEEESSCHHHHHHHHCC----CCSHHHHCTTCSEEEEE----EECSS---SE-EEEEEECCCBTTTTBCCEEE--EEE
T ss_pred EEEEEECCCHHHHHHHHHhhC--cchhhhhccccceeEEE----EEcCC---CE-EEEEEEeccccCCccCCCeE--EEE
Confidence 34567899999999999 73 32323322222111111 11111 12 233432111 12333321 111
Q ss_pred EEEEEcCCCCeEEEEEeeeeCCCCCC-CeEEEE---EEEEEEeec--CCceEEEEEEeeeeEEEeecceeeeeeehhhHH
Q 009741 414 QHAVLSPDKKIFVFETVQQAHDVPFG-SYFEIH---GRWHLETIA--ENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVN 487 (527)
Q Consensus 414 Q~~~~~~~~~~~vi~~~~~~~dvPyg-d~F~v~---~r~~i~~~~--~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~ 487 (527)
.......++.++++..+...+.+|-. ++-+++ +.|+|++.+ +++|+|... ..++..+|.. +.++.+.+..
T Consensus 138 r~~~~~~~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~---~~~Dp~G~iP-~~lvn~~~~~ 213 (231)
T 2r55_A 138 VLVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTF---FHTDLSGYLP-QNVVDSFFPR 213 (231)
T ss_dssp EEEEECTTSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC--CCCEEEEEE---ECEECCSSCC-HHHHHHHHHH
T ss_pred EEEEEcCCCEEEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCCCCCcEEEEEE---EEeCCCCCcc-HHHHHHHHhH
Confidence 22223344456666776766777754 434444 468999976 678999998 8888866532 4445544333
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 009741 488 KYKKEVELMLETARSYIKI 506 (527)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~ 506 (527)
... .+++.+++.++.
T Consensus 214 ~~~----~~~~~Lr~~~~~ 228 (231)
T 2r55_A 214 SMT----RFYANLQKAVKQ 228 (231)
T ss_dssp HHH----HHHHHHHHHHHG
T ss_pred hHH----HHHHHHHHHHHH
Confidence 443 444445555443
No 61
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=86.01 E-value=16 Score=31.63 Aligned_cols=150 Identities=11% Similarity=0.158 Sum_probs=85.0
Q ss_pred eeeeeeecCHHHHHHHhcCCCCchHHHHH-HHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEEE
Q 009741 339 IYNDVFPCTAEQFFTLLFSDDSKFTNEYR-AARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAV 417 (527)
Q Consensus 339 ~~~~~~~~s~~~~f~~lf~d~s~f~~~~~-~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~ 417 (527)
..+.+.++|++++|.++..|-...+.+.+ ..-...++.-+.|. .+..|.++|.. -|| .. ..++++.
T Consensus 6 ~~ei~i~a~a~kvw~~~~~d~~~l~pk~~P~~i~s~e~~eGdgg-----~Gsir~~~~~~-----g~~-~~--~~kErl~ 72 (159)
T 4a8u_A 6 ETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGG-----PGTIKKISFPE-----GFP-FK--YVKDRVD 72 (159)
T ss_dssp EEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTCCEEEEEECSSS-----TTCEEEEECCT-----TSS-CS--EEEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCccccchhhCchhccEEEEEcCCCC-----CceEEEEEEec-----CCC-cc--EEEEEEE
Confidence 34568899999999999654223344444 23455556677763 25779888752 233 22 3445555
Q ss_pred E-cCCCCeEEEEEeeeeCCCCCCCeEEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHHHHHH
Q 009741 418 L-SPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVELM 496 (527)
Q Consensus 418 ~-~~~~~~~vi~~~~~~~dvPygd~F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~ 496 (527)
. .+++..|..... --|++-...=+....+.+.+.++++|.++.. .+|.+-. ...+.-..++..++....+
T Consensus 73 ~iD~~~~~~~y~ii--egd~l~~~~~~y~~ti~v~p~~~ggs~v~wt-----~~y~~~~--~~~~~~~~~k~~~~~~~~~ 143 (159)
T 4a8u_A 73 EVDHTNFKYSYSVI--EGGPVGDTLEKISNEIKIVATPNGGSILKIN-----NKYHTKG--DHEVKAEQIKASKEMGETL 143 (159)
T ss_dssp EEETTTTEEEEEEE--EETTCBTTEEEEEEEEEEEECTTSCEEEEEE-----EEEEESS--SCCC-CHHHHHHHHHHHHH
T ss_pred EEccccCEEEEEEe--eCCCCccceEEEEEEEEEEECCCCceEEEEE-----EEEEECC--CCcCCHHHHHHHHHHHHHH
Confidence 3 333344433222 2233312233444566677777778877666 4454411 1122333345567788889
Q ss_pred HHHHHHHHhhcCCC
Q 009741 497 LETARSYIKICTSG 510 (527)
Q Consensus 497 ~~~~~~~l~~~~~~ 510 (527)
++.+..+|-++.+.
T Consensus 144 ~k~ie~yll~np~~ 157 (159)
T 4a8u_A 144 LRAVESYLLAHSDA 157 (159)
T ss_dssp HHHHHHHHHHCTTT
T ss_pred HHHHHHHHhhChhh
Confidence 99999999877654
No 62
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=85.74 E-value=17 Score=31.41 Aligned_cols=137 Identities=12% Similarity=0.168 Sum_probs=70.7
Q ss_pred eeeeecCHHHHHHHhcCCCCchHHHHHHHcCCcceEeccceecCCCCCeEEEEEEEE-ecCCCCCCcceeEeEEEEEEEc
Q 009741 341 NDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRS-LCKSPIYPRDTAMTESQHAVLS 419 (527)
Q Consensus 341 ~~~~~~s~~~~f~~lf~d~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~-~~~~~~gpk~~~~~~~Q~~~~~ 419 (527)
..+.+.|++++|.++=+ -.-|..++ . ...||...++ + ..| ... .+ .+|+..-.-.-+-++...
T Consensus 12 s~~I~ap~e~v~~lv~D--ve~w~~~y-----p--~~~p~~~~~~-~-~~~---~~~a~l--~vg~~~~~~~~~s~~~~~ 75 (161)
T 3p9v_A 12 DLEIPASYDEVFDLLAD--VPKSASHF-----P--KVDKLVDLGN-N-AYR---WEMEKV--GVDKHAIQSVYACTYHAD 75 (161)
T ss_dssp EEEESSCHHHHHHHHTC--HHHHHTTS-----T--TEEEEEEEET-T-EEE---EEECCB--SSGGGCBCCEEEEEEEEE
T ss_pred EEEEcCCHHHHHHHHhC--hhhhHhhC-----C--CeEEEEEcCC-C-ceE---EEEEEE--eeeeEEEEEEEEEEEEEc
Confidence 35789999999999842 11111111 1 1345655544 3 222 222 22 255543211222223333
Q ss_pred CCCCeEEEEEeeeeCCCCCCCe-EEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHHHHHHHH
Q 009741 420 PDKKIFVFETVQQAHDVPFGSY-FEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVELMLE 498 (527)
Q Consensus 420 ~~~~~~vi~~~~~~~dvPygd~-F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~ 498 (527)
+++..+.++.. + |+- =....+|.+++.++++|+|... ...+|.. .+.++++...-.-..+.++.+++
T Consensus 76 ~~~~~I~~~~~----~---g~~~~~l~g~w~f~p~~~g~t~V~~~---~~~e~~~--pl~~ll~~~~~~~~~~~~~~~v~ 143 (161)
T 3p9v_A 76 KEAGKITWSPI----K---GEGNGVVSGSWTLSAKGDNATAVKFQ---TSAELTV--PLPSLLKLAISPVIKHEFNSLVD 143 (161)
T ss_dssp TTTTEEEEEEC----T---TSTTEEEEEEEEEEESSSSCEEEEEE---EEEEEEE--CSCGGGHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEe----c---CccceeEEEEEEEEECCCCeEEEEEE---EEEEEcC--cchHHHHHHHHHHHHHHHHHHHH
Confidence 43445544332 2 443 3567899999999888999999 8888863 12223333222233444455555
Q ss_pred HHHHHHh
Q 009741 499 TARSYIK 505 (527)
Q Consensus 499 ~~~~~l~ 505 (527)
...+.++
T Consensus 144 af~~ra~ 150 (161)
T 3p9v_A 144 TYMANLK 150 (161)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554443
No 63
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=85.44 E-value=3.2 Score=38.89 Aligned_cols=79 Identities=6% Similarity=0.013 Sum_probs=50.0
Q ss_pred CCCCeEEEEEeeeeCCCCCCCe---EEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHHHHHH
Q 009741 420 PDKKIFVFETVQQAHDVPFGSY---FEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVELM 496 (527)
Q Consensus 420 ~~~~~~vi~~~~~~~dvPygd~---F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~ 496 (527)
.++.++++.....-+++|-.++ ....+.|.|++.++++|+|... +.++..+|. =..+ +.+. ....-..
T Consensus 147 ~~g~~vi~~~Sv~h~~~P~~g~VR~~~~~~g~~i~P~~~~~t~vt~~---~~~Dp~G~i--P~~l-n~~~---~~~~~~~ 217 (237)
T 2pso_A 147 PKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHI---CRIDLKGHS--PEWY-SKGF---GHLCAAE 217 (237)
T ss_dssp GGGCEEEEEEECCCTTCCCCSSEECCEEEEEEEEEECSTTCEEEEEE---EEECCSSSC--TTTT-TTHH---HHHHHHH
T ss_pred CCCEEEEEEEcccCCCCCCCCcEEEEEeccEEEEEECCCCCEEEEEE---EEeCCCCCc--hHHH-HHHH---HHHHHHH
Confidence 3456666666766677886632 2356899999999999999999 888886532 2223 3222 2222235
Q ss_pred HHHHHHHHhhc
Q 009741 497 LETARSYIKIC 507 (527)
Q Consensus 497 ~~~~~~~l~~~ 507 (527)
+..+++.++..
T Consensus 218 l~~LR~~~~~~ 228 (237)
T 2pso_A 218 VARIRNSFQPL 228 (237)
T ss_dssp HHHHHHTTSCC
T ss_pred HHHHHHHHHhh
Confidence 66666666553
No 64
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=85.39 E-value=17 Score=31.26 Aligned_cols=148 Identities=8% Similarity=0.050 Sum_probs=83.4
Q ss_pred eeeeeeecCHHHHHHHhcCCCCchHHHHHHHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEEE-
Q 009741 339 IYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAV- 417 (527)
Q Consensus 339 ~~~~~~~~s~~~~f~~lf~d~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~- 417 (527)
..+.+.++|++++|.++-.|-...+.+++......++.-+.|. .+..|.++|. + |..... .++++.
T Consensus 6 ~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g~-----~Gsir~~~~~-~-----G~~~~~--~kErl~~ 72 (155)
T 1icx_A 6 ENEQSSTVAPAKLYKALTKDSDEIVPKVIEPIQSVEIVEGNGG-----PGTIKKIIAI-H-----DGHTSF--VLHKLDA 72 (155)
T ss_dssp EEEEEESSCHHHHHHHHTTTHHHHHHHHSTTEEEEEEEESSSS-----TTCEEEEEEE-S-----SSSEEE--EEEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCcchhcchhhhhccEEEEEecCCC-----CCeEEEEEEe-c-----CCccee--EEEEEEE
Confidence 4567899999999999863222234555544444555566662 2567999886 2 322222 334444
Q ss_pred EcCCCCeEEEEEeeeeCCCCCCCeEEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHHHHHHH
Q 009741 418 LSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVELML 497 (527)
Q Consensus 418 ~~~~~~~~vi~~~~~~~dvPygd~F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~ 497 (527)
..+++..|.....- -|+.-...=+....|.+.+.++++|.++.. ++|.+..-. ..-..++..++.+..++
T Consensus 73 ~D~~~~~~~y~iie--Gd~~~~~~~~~~~~~~v~~~~~~gs~v~w~-----~~y~~~~~~---~~~~~~~~~~~~~~~~~ 142 (155)
T 1icx_A 73 IDEANLTYNYSIIG--GEGLDESLEKISYESKILPGPDGGSIGKIN-----VKFHTKGDV---LSETVRDQAKFKGLGLF 142 (155)
T ss_dssp EEGGGTEEEEEEEE--ETTSCTTEEEEEEEEEEEECGGGCEEEEEE-----EEEEESSSS---CCHHHHTTHHHHHHHHH
T ss_pred EeccCCEEEEEEEe--cCCCccceEEEEEEEEEEecCCCCEEEEEE-----EEEEECCCC---CCHHHHHHHHHHHHHHH
Confidence 33333443332221 232212344456677778876667877666 445542211 22223334478889999
Q ss_pred HHHHHHHhhcCC
Q 009741 498 ETARSYIKICTS 509 (527)
Q Consensus 498 ~~~~~~l~~~~~ 509 (527)
+.++++|-.+.+
T Consensus 143 k~ie~yll~~p~ 154 (155)
T 1icx_A 143 KAIEGYVLAHPD 154 (155)
T ss_dssp HHHHHHHHHCTT
T ss_pred HHHHHHHHhCCC
Confidence 999999987753
No 65
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=84.85 E-value=6.8 Score=36.04 Aligned_cols=145 Identities=8% Similarity=0.030 Sum_probs=71.5
Q ss_pred eeeeeeecCHHHHHHHhcCCCCchHHHHHHHcCCcceEeccceecCCCCCeEEEEEEEEecCCC--CCCcceeEeEEEEE
Q 009741 339 IYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSP--IYPRDTAMTESQHA 416 (527)
Q Consensus 339 ~~~~~~~~s~~~~f~~lf~d~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~--~gpk~~~~~~~Q~~ 416 (527)
-+..+++++++++|++++.... -.++ +.++.....-..- +..+.-+.|..+-..+ +.|+.-- .....
T Consensus 70 k~~~~v~~~~~~v~~~l~d~~~--r~~W-----d~~~~~~~vle~i--d~~~~I~y~~~~~~~~~~v~~RDfv--~~r~~ 138 (224)
T 1jss_A 70 KAQGVMDDVVNNVIDHIRPGPW--RLDW-----DRLMTSLDVLEHF--EENCCVMRYTTAGQLLNIISPREFV--DFSYT 138 (224)
T ss_dssp EEEEEESSCHHHHHHHHSSSTT--HHHH-----CSSEEEEEEEEEC--STTEEEEEEEECCBTTTTBCCEEEE--EEEEE
T ss_pred EEEEEEeCCHHHHHHHHhCccc--cccc-----ccceeeEEEEEEc--CCCeEEEEEEcccccCCCCCCCeEE--EEEEE
Confidence 3456789999999999986321 1111 2222222221111 1223323333321111 3444321 11222
Q ss_pred EEcCCCCeEEEEEeeeeCCCCCCCeEEEE---EEEEEEeecC--CceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHH
Q 009741 417 VLSPDKKIFVFETVQQAHDVPFGSYFEIH---GRWHLETIAE--NSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKK 491 (527)
Q Consensus 417 ~~~~~~~~~vi~~~~~~~dvPygd~F~v~---~r~~i~~~~~--~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~ 491 (527)
.... +.++++..+..-++.|- ++=+++ +.|+|++..+ ++|+|... +.++..+|.. ++++.+.+..
T Consensus 139 ~~~~-~~~vi~~~Sv~hp~~~~-g~VR~~~~~~g~~i~p~~~~~~~t~vt~~---~~~Dp~G~iP-~~lvn~~~~~---- 208 (224)
T 1jss_A 139 VGYE-EGLLSCGVSVEWSETRP-EFVRGYNHPCGWFCVPLKDSPSQSLLTGY---IQTDLRGMIP-QSAVDTAMAS---- 208 (224)
T ss_dssp EEET-TEEEEEEEECCCCCCCT-TSEECEECSEEEEEEEETTEEEEEEEEEE---ECEECCSCCC-HHHHHHHHHH----
T ss_pred EEcC-CeEEEEEeeeecCCCCC-CCEEEEecccEEEEEEcCCCCCceEEEEE---EEeCCCCCcc-HHHHHHHHHH----
Confidence 2333 33554444444466653 555554 6799999865 48999888 8888766432 3444443333
Q ss_pred HHHHHHHHHHHHH
Q 009741 492 EVELMLETARSYI 504 (527)
Q Consensus 492 ~~~~~~~~~~~~l 504 (527)
..-..++.+++.+
T Consensus 209 ~~~~~~~~Lr~~~ 221 (224)
T 1jss_A 209 TLANFYSDLRKGL 221 (224)
T ss_dssp HHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHH
Confidence 3334444444444
No 66
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=84.78 E-value=19 Score=31.15 Aligned_cols=150 Identities=9% Similarity=0.015 Sum_probs=84.4
Q ss_pred eeeeeeeecCHHHHHHHhcCCCCchHHHHHHHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEEE
Q 009741 338 GIYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAV 417 (527)
Q Consensus 338 ~~~~~~~~~s~~~~f~~lf~d~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~ 417 (527)
...+.+.++|++++|.++-.|-...+.+++......++.-+.|. .+..|.++|. + |..... .++++.
T Consensus 6 ~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eGdgg-----~Gsir~~~~~-~-----g~~~~~--~kErl~ 72 (158)
T 2qim_A 6 FQDEYTSTIAPAKLYKALVTDADIIIPKAVETIQSVEIVEGNGG-----PGTIKKLTFI-E-----GGESKY--VLHKIE 72 (158)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTEEEEEEEESSSS-----TTCEEEEEEE-E-----TTEEEE--EEEEEE
T ss_pred EEEEEEecCCHHHHHHHHhcCccchhhhHHhhCcEEEEEecCCC-----CCeEEEEEEc-C-----CCccee--EEEEEE
Confidence 34567899999999999863222234555544444555566662 2578999986 2 322112 334444
Q ss_pred -EcCCCCeEEEEEeeeeCCCCCCCeEEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHHHHHH
Q 009741 418 -LSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVELM 496 (527)
Q Consensus 418 -~~~~~~~~vi~~~~~~~dvPygd~F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~ 496 (527)
..+++..|.....- -++.-...=+....|.+.+.++++|.++.. ++|.+.. .....-..++..++.+..+
T Consensus 73 ~~D~~~~~~~y~iie--G~~~~~~~~~~~~~~~v~~~~~~gs~v~wt-----~~y~~~~--~~~~~~~~~~~~~~~~~~~ 143 (158)
T 2qim_A 73 AIDEANLGYNYSIVG--GVGLPDTIEKISFETKLVEGANGGSIGKVT-----IKIETKG--DAQPNEEEGKAAKARGDAF 143 (158)
T ss_dssp EEEGGGTEEEEEEEE--ESSCCCSEEEEEEEEEEEECSTTCEEEEEE-----EEEEEST--TCCCCHHHHHHHHHHHHHH
T ss_pred EEecCCCEEEEEEEe--ccCCccceEEEEEEEEEEecCCCCEEEEEE-----EEEEECC--CCCCCHHHHHHHHHHHHHH
Confidence 33333443332221 222212233456677788876667877666 4454421 1112222333457888999
Q ss_pred HHHHHHHHhhcCC
Q 009741 497 LETARSYIKICTS 509 (527)
Q Consensus 497 ~~~~~~~l~~~~~ 509 (527)
++.++++|-.+.+
T Consensus 144 ~k~ie~yll~~p~ 156 (158)
T 2qim_A 144 FKAIESYLSAHPD 156 (158)
T ss_dssp HHHHHHHHHHCSS
T ss_pred HHHHHHHHHhCcC
Confidence 9999999987743
No 67
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=83.46 E-value=14 Score=34.01 Aligned_cols=56 Identities=11% Similarity=0.068 Sum_probs=39.7
Q ss_pred EEEeeeecCCCCCeeccEEEEEecCC---CcEEEEEEEEcCCC----CCCceeEEEEEEcccC
Q 009741 47 KRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDWDII----WKSTVLGSVIVTVESE 102 (527)
Q Consensus 47 ~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~~~V~d~d~~----~~d~~iG~~~i~l~~l 102 (527)
..+|-+...+.+|.|+|++.+.+... ...|.|++++...- ..+..+|-+.++|-.-
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~ 140 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRY 140 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCT
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcccC
Confidence 35677888899999999999998542 34599999986532 1234567776666544
No 68
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=82.86 E-value=22 Score=30.60 Aligned_cols=149 Identities=8% Similarity=0.027 Sum_probs=83.7
Q ss_pred eeeeeeeecCHHHHHHHhcCCCCchHHHHHHHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEEE
Q 009741 338 GIYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAV 417 (527)
Q Consensus 338 ~~~~~~~~~s~~~~f~~lf~d~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~ 417 (527)
...+.+.++|++++|.++-.|-...+.+++......++.-+.|. .+..|.++|. + |.... .-++++.
T Consensus 5 ~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g~-----~Gsir~~~~~-~-----G~~~~--~~kErl~ 71 (157)
T 1tw0_A 5 FRDETSSSVAPAKLYKALTKDSDTIAQKIDGPIQSIELVEGNGG-----VGTIKKITAN-E-----GDKTS--FVLQKVD 71 (157)
T ss_dssp EEEEEEESSCHHHHHHHHHHTGGGGGGGSCSSEEEEEEEESSSS-----TTCEEEEEEE-E-----TTEEE--EEEEEEE
T ss_pred EEEEEEecCCHHHHHHHHhcCcchhhhhHHhhccEEEEEeCCCC-----CCeEEEEEee-C-----CCccc--eEEEEEE
Confidence 34567899999999999763222234444433344445556662 2567999986 2 32211 2345555
Q ss_pred -EcCCCCeEEEEEeeeeCCCCCCCeEEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHHHHHH
Q 009741 418 -LSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVELM 496 (527)
Q Consensus 418 -~~~~~~~~vi~~~~~~~dvPygd~F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~ 496 (527)
..+++..|..... --|+.-...=+....|.+.+.++++|.++.. ++|.+.. .....-..++..++.+..+
T Consensus 72 ~~D~~~~~~~y~ii--eGd~~~~~~~~~~~~~~v~~~~~~gs~v~w~-----~~y~~~~--~~~~~~~~~~~~~~~~~~~ 142 (157)
T 1tw0_A 72 AIDEANLGYDYSIV--GGTGLPESLEKLSFETKVVAGSGGGSISKVT-----LKFHTKG--DAPLSDAVRDDALAKGAGF 142 (157)
T ss_dssp EEETTTTEEEEEEE--ECTTSCTTEEEEEEEEEEEECSSSSEEEEEE-----EEEEEST--TCCCCHHHHHHHHHHHHHH
T ss_pred EEeccCCEEEEEEE--ecCCCccceEEEEEEEEEEecCCCCEEEEEE-----EEEEECC--CCCCCHHHHHHHHHHHHHH
Confidence 3344444433322 2233222344556677788876667877666 4454421 0112222333457888999
Q ss_pred HHHHHHHHhhcC
Q 009741 497 LETARSYIKICT 508 (527)
Q Consensus 497 ~~~~~~~l~~~~ 508 (527)
++.++++|-.+.
T Consensus 143 ~k~ie~yll~~p 154 (157)
T 1tw0_A 143 FKAIEGYVLANP 154 (157)
T ss_dssp HHHHHHHHHHCG
T ss_pred HHHHHHHHHhCc
Confidence 999999987764
No 69
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=81.87 E-value=9.7 Score=40.92 Aligned_cols=73 Identities=16% Similarity=0.197 Sum_probs=49.5
Q ss_pred cccCcccceeEeE-----EEeeeeccccceeEEeecceEEEEeccCCceeEEEEecccceeeeecccc---c-ccCcEEE
Q 009741 169 FNLLPDEFVELSY-----SCVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHA---F-INPAITI 239 (527)
Q Consensus 169 F~lp~~e~l~~~f-----~c~l~~~~~~~Gr~yis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~---~-~~~~i~i 239 (527)
|.|-++|.++..- .|.+. -...|.||+|..++.|.+..-.....+-||+.-|..|+|..+. . ....|.|
T Consensus 79 ~~LLPGE~v~~~~~~V~~~~p~~--~~~~GtL~lTnyrLiF~~~~~~~~~~~~IPL~~I~~Iekv~g~s~~g~~~~~l~I 156 (657)
T 1lw3_A 79 PPLLPGENIKDMAKDVTYICPFT--GAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLET 156 (657)
T ss_dssp CCCCTTCCEEEEEEEEEEEETTT--EEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEE
T ss_pred CccCCCeeEEEEeCCEEEecCCC--CceeEEEEEECCEEEEEecCCCcceEEEecccceEEEEecCCCcccCCCCceEEE
Confidence 3455677666442 23222 2467999999999999986433345688999999999997532 1 1226888
Q ss_pred EEec
Q 009741 240 ILRM 243 (527)
Q Consensus 240 ~~~~ 243 (527)
.+++
T Consensus 157 ~CKD 160 (657)
T 1lw3_A 157 VCKD 160 (657)
T ss_dssp EETT
T ss_pred EecC
Confidence 8863
No 70
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=81.59 E-value=10 Score=39.85 Aligned_cols=73 Identities=16% Similarity=0.171 Sum_probs=48.3
Q ss_pred ccCcccceeEeEEEe-eee--ccccceeEEeecceEEEEeccCCceeEEEEecccceeeeecccc---cc-cCcEEEEEe
Q 009741 170 NLLPDEFVELSYSCV-IER--SFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHA---FI-NPAITIILR 242 (527)
Q Consensus 170 ~lp~~e~l~~~f~c~-l~~--~~~~~Gr~yis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~---~~-~~~i~i~~~ 242 (527)
.|-++|.+...-.-. +.. .-...|.||+|..++.|.+..-.....+-||+.-|..|+|..+. .- ...|.|.++
T Consensus 8 ~lLpGE~i~~~~~~V~~~~~~~~~~~GtL~lTn~rLiF~~~~~~~~~~~~iPL~~I~~vek~~~~s~~~~~~~~l~I~CK 87 (528)
T 1zsq_A 8 PLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVCK 87 (528)
T ss_dssp CCCTTCCEEEEEEEEEEEETTTEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEET
T ss_pred ccCCCCeEEEecCCEEEeCCCCCceeEEEEEECCEEEEEccCCCccEEEEeeccceEEEEEcCCCCcCCCCCceEEEEcc
Confidence 345666555432211 111 12468999999999999986433355789999999999997532 11 226888886
No 71
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=80.07 E-value=4.5 Score=42.30 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=39.1
Q ss_pred cccceeEEeecceEEEEeccCCceeEEEEecccceeeeecccccccCcEEEEEec
Q 009741 189 FLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRM 243 (527)
Q Consensus 189 ~~~~Gr~yis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~~~ 243 (527)
....|.||+|..++.|.+. .....-||+.-|..|+|.....-...|.|.+++
T Consensus 23 ~~~~GtL~lTn~~LiF~~~---~~~e~wi~~~~I~~VeK~~~~~~~~~l~I~CKD 74 (512)
T 2yf0_A 23 KSLTGTLYLTATHLLFIDS---HQKETWILHHHIASVEKLALTTSGCPLVIQCKN 74 (512)
T ss_dssp -CCEEEEEECSSEEEEEES---SSCEEEEEGGGEEEEEECCCBTTBEEEEEEETT
T ss_pred CceeEEEEEECCEEEEeCC---CCCceEecccceeEEEEecCCCCCceEEEEecC
Confidence 4567999999999999993 244578999999999997643222368888863
No 72
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=75.94 E-value=34 Score=28.63 Aligned_cols=140 Identities=9% Similarity=-0.009 Sum_probs=71.3
Q ss_pred ceeeeeeeecCHHHHHHHhcCCCCchHHHHHHHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEE
Q 009741 337 VGIYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHA 416 (527)
Q Consensus 337 ~~~~~~~~~~s~~~~f~~lf~d~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~ 416 (527)
..-.+.+++.|++++|.++-+ ...+.++.- +. ..+. .+ ++. +.+... ..+||-.......-++
T Consensus 14 ~i~~~~~i~ap~e~Vw~~l~D--~~~~~~w~p--~~-----~~~~-~~--~~~---~~~~~~--~~~g~~~~~~~~~~~~ 76 (157)
T 2ns9_A 14 RYEGSFEVSKTPEEVFEFLTD--PKRFSRAFP--GF-----KSVE-VE--DGS---FTIELR--LSLGPLRGDARVRASF 76 (157)
T ss_dssp EEEEEEEESSCHHHHHHHHTC--HHHHGGGST--TE-----EEEE-EE--TTE---EEEEEE--EESSSSEEEEEEEEEE
T ss_pred EEeeEEEEcCCHHHHHHHHcC--HHHHHhhCC--Cc-----eEEE-EC--CCE---EEEEEE--EEEcceeEEEEEEEEE
Confidence 455667999999999998853 222333221 11 1122 11 121 223322 2245533333333333
Q ss_pred EEcCCCCeEEEEEeeeeCCCCCCCeEEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHH-HHHHHHH
Q 009741 417 VLSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNK-YKKEVEL 495 (527)
Q Consensus 417 ~~~~~~~~~vi~~~~~~~dvPygd~F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~-~~~~~~~ 495 (527)
........+.+..... + .+..|.....|.++..+ ++|+|... ..+++... +..++.. .++. ..+.++.
T Consensus 77 ~~~~~~~~i~~~~~~~--~--~~~~~~~~~~~~l~~~~-~gT~v~~~---~~~~~~g~--l~~~~~~-~~~~~~~~~~~~ 145 (157)
T 2ns9_A 77 EDLEKPSKATVKGSGR--G--AGSTLDFTLRFAVEPSG-GGSRVSWV---FEGNVGGL--AASMGGR-VLDSLARRMIND 145 (157)
T ss_dssp EEEETTTEEEEEEEEE--C--SSEEEEEEEEEEEEEET-TEEEEEEE---EEEEEEEG--GGGSCHH-HHHHHHHHHHHH
T ss_pred EecCCCcEEEEEEEec--C--CCccEEEEEEEEEEeCC-CcEEEEEE---EEEEECcC--HHHhhHH-HHHHHHHHHHHH
Confidence 2222235666543322 2 12357788899999987 78999999 88887541 2222211 2222 2334555
Q ss_pred HHHHHHHHH
Q 009741 496 MLETARSYI 504 (527)
Q Consensus 496 ~~~~~~~~l 504 (527)
.++.+++.+
T Consensus 146 ~~~~lk~~~ 154 (157)
T 2ns9_A 146 VISGVKREL 154 (157)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555554
No 73
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=75.33 E-value=22 Score=40.16 Aligned_cols=87 Identities=13% Similarity=0.130 Sum_probs=57.8
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----EEEeeeecCCCCCeeccEEEEEe--cC--CCcEEEEEEEE
Q 009741 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC--GSE----KRFSSMVPGSRYPMWGEEFNFSV--DE--LPVQIIVTIYD 82 (527)
Q Consensus 13 ~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~--~~~----~~~T~~~~~t~nP~W~e~f~f~v--~~--~~~~L~~~V~d 82 (527)
...+.|+|.++.++... ...+-||.+.+ +++ ...|..+.-..+|.|||.+.|++ .+ ....|.|+||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 45688999999998653 34677877664 432 23455555577899999999985 33 35679999999
Q ss_pred cCCC--C----------CCceeEEEEEEcccC
Q 009741 83 WDII--W----------KSTVLGSVIVTVESE 102 (527)
Q Consensus 83 ~d~~--~----------~d~~iG~~~i~l~~l 102 (527)
.... + .+..+|-+.++|-+-
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EC----------------CEEEEEEEEESBCT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECC
Confidence 6432 1 234788888877665
No 74
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=74.75 E-value=40 Score=28.93 Aligned_cols=146 Identities=14% Similarity=0.133 Sum_probs=79.1
Q ss_pred eeeeeeeecCHHHHHHHhcCCCCchHHHHH-HHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEE
Q 009741 338 GIYNDVFPCTAEQFFTLLFSDDSKFTNEYR-AARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHA 416 (527)
Q Consensus 338 ~~~~~~~~~s~~~~f~~lf~d~s~f~~~~~-~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~ 416 (527)
.-.+.+.++|++++|.+++.|-...+.+.+ ..-...++ -+.+. .+..|.++|.. -||. . ...+++
T Consensus 6 ~~~ei~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~-eGdg~-----~Gsir~~~~~~-----g~~~-~--~~kErl 71 (154)
T 2vjg_A 6 HSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDGG-----AGTVRIITLPE-----GSPI-T--TMTVRT 71 (154)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSSS-----TTCEEEEECCT-----TCSC-C--EEEEEE
T ss_pred EEEEEEecCCHHHHHHhhhCCccccchhhccCceeEEEE-eCCCC-----CceEEEEEecC-----CCCc-e--EEEEEE
Confidence 345678899999999998775333334443 23344444 44431 36789888741 2332 2 234555
Q ss_pred E-EcCCCCeEEEEEeeeeCCCCCCCeEEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHHHHH
Q 009741 417 V-LSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVEL 495 (527)
Q Consensus 417 ~-~~~~~~~~vi~~~~~~~dvPygd~F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~ 495 (527)
. +.+++..|..... --|++-...=+....+.+.+.++++|.++.. .+|.+-. ...+.-..++..++....
T Consensus 72 ~~iD~~~~~~~y~ii--egd~l~~~~~~~~~ti~v~p~~~ggs~v~wt-----~~y~~~~--~~~~~~~~~~~~~~~~~~ 142 (154)
T 2vjg_A 72 DAVNKEALSYDSTVI--DGDILLGFIESIETHMVVVPTADGGSITKTT-----AIFHTKG--DAVVPEENIKFADAQNTA 142 (154)
T ss_dssp EEEETTTTEEEEEEE--ESGGGTTTEEEEEEEEEEEECTTSCEEEEEE-----EEEEEST--TCCCCHHHHHHHHHHHHH
T ss_pred EEEeccCCEEEEEEE--ecCCCccceEEEEEEEEEEECCCCcEEEEEE-----EEEEECC--CCCCCHHHHHHHHHHHHH
Confidence 4 3333444433322 2333211233444556677776777876666 4454411 112223334456777788
Q ss_pred HHHHHHHHHhh
Q 009741 496 MLETARSYIKI 506 (527)
Q Consensus 496 ~~~~~~~~l~~ 506 (527)
+++.++.+|-+
T Consensus 143 ~~k~ie~ylla 153 (154)
T 2vjg_A 143 LFKAIEAYLIA 153 (154)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 88888888754
No 75
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=74.39 E-value=16 Score=34.17 Aligned_cols=80 Identities=10% Similarity=0.042 Sum_probs=42.1
Q ss_pred CeEEEEEeeeeCCCCCCCeE-EEE------EEEEEEee--------cCCceEEEEEEeeeeEEEeecceeeeeeehhhHH
Q 009741 423 KIFVFETVQQAHDVPFGSYF-EIH------GRWHLETI--------AENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVN 487 (527)
Q Consensus 423 ~~~vi~~~~~~~dvPygd~F-~v~------~r~~i~~~--------~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~ 487 (527)
.++++.....-+++|-..-| +++ +.|.+.+. ++++|++... +.++..++. -+.++.+.+..
T Consensus 156 ~~~i~~~Sv~~~~~P~~~g~VR~~~~~~~~~~~~i~~~~g~~~l~~~~~~t~vt~~---~~~Dp~G~i-P~~lvn~~~~~ 231 (255)
T 2e3n_A 156 TWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGNQEISRDNILCKITYV---ANVNPGGWA-PASVLRAVAKR 231 (255)
T ss_dssp EEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEEC---CCCCCCGGGEEEEEEEE---EEEECSSCC-CHHHHHHHHHH
T ss_pred EEEEEEeccCCCCCCCCCCCEEEEEEeeeeeeeEeccCCCCcccccCCCcEEEEEE---EEeCCCCcc-CHHHHHHHHhc
Confidence 56666667666777766443 222 22233332 3367888888 888776532 23334443444
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 009741 488 KYKKEVELMLETARSYIKI 506 (527)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~ 506 (527)
.....++.+-+.+++..+.
T Consensus 232 ~~~~~l~~L~k~v~~~~~~ 250 (255)
T 2e3n_A 232 EYPKFLKRFTSYVQEKTAG 250 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHhccC
Confidence 4555555555555544443
No 76
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=73.97 E-value=45 Score=29.14 Aligned_cols=150 Identities=9% Similarity=0.104 Sum_probs=82.6
Q ss_pred eeeeeeeecCHHHHHHHhcCCCCchHHHHH-HHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEE
Q 009741 338 GIYNDVFPCTAEQFFTLLFSDDSKFTNEYR-AARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHA 416 (527)
Q Consensus 338 ~~~~~~~~~s~~~~f~~lf~d~s~f~~~~~-~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~ 416 (527)
...+.+.++|++++|.++..|-...+.+.+ ..-...++.-+.+. .+..|.++|. ||. . ...+++
T Consensus 11 ~~~ei~i~apa~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdgg-----~Gsir~~t~~-------g~~-~--~~kErl 75 (168)
T 3rws_A 11 SESEYVSSLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGDGG-----PGTIKKLTFV-------GDF-G--STKQHI 75 (168)
T ss_dssp EEEEEEESSCHHHHHHHHHTSHHHHHHHHSTTTEEEEEEEESSSS-----TTCEEEEEES-------SSS-C--EEEEEE
T ss_pred EEEEEEecCCHHHHHHHHhcCccccchhhCccccceEEEeeCCCC-----CCeEEEEEEc-------CCC-e--EEEEEE
Confidence 455678899999999998554223233333 12333344445431 3678988876 331 1 233555
Q ss_pred EE-cCCCCeEEEEEeeeeCCCCCCC--eEEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceee-eeeehhhHHHHHHH
Q 009741 417 VL-SPDKKIFVFETVQQAHDVPFGS--YFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQ-FKIKTGAVNKYKKE 492 (527)
Q Consensus 417 ~~-~~~~~~~vi~~~~~~~dvPygd--~F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K-~~Ie~~~~~~~~~~ 492 (527)
.. .+++..|..... --|+ .++ .=+....+.+.+.++++|.++.. ++|.+-. . ..+.-..++..++.
T Consensus 76 ~~iD~~~~~~sY~ii--egd~-l~~~p~~~y~~ti~v~p~~~ggs~v~wt-----~~y~~~~--~d~~~~~e~~k~~~~~ 145 (168)
T 3rws_A 76 DMVDRENCAYTYSVY--EGIA-LSDQPLEKIVFEFKLVPTPEEGCIVKST-----TKYYTKG--DDIELSKDYLEAGIER 145 (168)
T ss_dssp EEEETTTTEEEEEEC--SSCC-BTTBCEEEEEEEEEEEECTTSCEEEEEE-----EEEEECS--SSCCCCHHHHHHHHHH
T ss_pred EEEcccCCEEEEEEE--ccCc-ccCcCceEEEEEEEEEECCCCceEEEEE-----EEEEECC--CccCCCHHHHHHHHHH
Confidence 53 333444443322 1233 222 22334456677777778877666 3444311 1 11222234457788
Q ss_pred HHHHHHHHHHHHhhcCCCCC
Q 009741 493 VELMLETARSYIKICTSGGE 512 (527)
Q Consensus 493 ~~~~~~~~~~~l~~~~~~~~ 512 (527)
...+++.++.+|-++....+
T Consensus 146 ~~~~~k~ie~yllanp~~~~ 165 (168)
T 3rws_A 146 FEGFTKAVESFLLANPDYNK 165 (168)
T ss_dssp HHHHHHHHHHHHHHCTTC--
T ss_pred HHHHHHHHHHHHHhChHhhc
Confidence 88999999999988876543
No 77
>1t77_A Lipopolysaccharide-responsive and beige-like anchor protein, CDC4-like protein; PH-beach domains, vesicle trafficking, signal transduction; 2.40A {Homo sapiens} SCOP: a.169.1.1 b.55.1.6 PDB: 1mi1_A
Probab=73.89 E-value=6.4 Score=39.84 Aligned_cols=68 Identities=19% Similarity=0.241 Sum_probs=49.5
Q ss_pred ceeEeEEEeeee-ccccceeEEeecceEEEEecc----CC----------ceeEEEEecccceeeeecccccccCcEEEE
Q 009741 176 FVELSYSCVIER-SFLYHGRMYVSAWHICFHSNA----FS----------RQMKVIIPIGDIDEIQRSQHAFINPAITII 240 (527)
Q Consensus 176 ~l~~~f~c~l~~-~~~~~Gr~yis~~~~cF~s~~----~g----------~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~ 240 (527)
+++-++.|.+.. .....|++.|+...++|.... |. ......+++++|..|-+..-.+-..||+|.
T Consensus 2 ~v~~~~~~~~i~p~~~~~G~l~it~~~iyF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~~Rryll~~~alEif 81 (414)
T 1t77_A 2 PVSLSTPAQLVAPSVVVKGTLSVTSSELYFEVDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIF 81 (414)
T ss_dssp CCSEEEEEEEECSSCEEEEEEEECSSEEEEEECTTCHHHHHSCHHHHHHCCCTTCEEEGGGEEEEEEEEETTEEEEEEEE
T ss_pred CEEEEEEEEEEeeecceeeEEEEeCCEEEEEeCCCcccccccccchhccccCcceEecchheeeeeeeeccCcceeEEEE
Confidence 456678888887 666899999999999999632 10 001136889999999887654444599999
Q ss_pred Eec
Q 009741 241 LRM 243 (527)
Q Consensus 241 ~~~ 243 (527)
+..
T Consensus 82 ~~~ 84 (414)
T 1t77_A 82 MAN 84 (414)
T ss_dssp ETT
T ss_pred EcC
Confidence 853
No 78
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=72.44 E-value=16 Score=29.51 Aligned_cols=93 Identities=14% Similarity=0.260 Sum_probs=59.5
Q ss_pred cccceeEeEEEeeeeccccceeEEeecceEEEEeccCCceeEEEEecccceeeeecccccccC--cEEEEEecCCCCCCC
Q 009741 173 PDEFVELSYSCVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINP--AITIILRMGAGGHGV 250 (527)
Q Consensus 173 ~~e~l~~~f~c~l~~~~~~~Gr~yis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~--~i~i~~~~~~~~~~~ 250 (527)
.+|.|+......+.+. .|.||++..+|-|-.+. +-.-.+.+++.||...+-++-. .+ .++|..+.
T Consensus 5 ~~~~ll~v~~v~yKK~---dGtL~l~~d~i~W~p~~-~~~~~vs~~~~~I~~qq~SP~~--k~KVqLqi~l~~------- 71 (108)
T 1pfj_A 5 SEEVLLIVKKVRQKKQ---DGALYLMAERIAWAPEG-KDRFTISHMYADIKCQKISPEG--KAKIQLQLVLHA------- 71 (108)
T ss_dssp SCCEEEEESCCBCSSC---BCEEEEETTEEEEECSS-SSSCSEEEETTTCCCEEECCSS--SSSCEEEEECSS-------
T ss_pred chheeEEehhheeecC---CceEEEEcceEEEccCC-CCCceEEEehhhhhcceeCCCC--CccEEEEEEEeC-------
Confidence 3455555555555542 39999999999988754 3566777899999987766532 12 45666542
Q ss_pred CCCCCCCCceeEEEeeee----chHHHHHHHHHHHHhh
Q 009741 251 PPLGSPDGRVRYKFASFW----NRNHALRQLQRTAKNY 284 (527)
Q Consensus 251 ~~~~~~~~~~~~~f~sf~----~r~~~~~~l~~~~~~~ 284 (527)
++...|.|++=. .||..=.+|..++...
T Consensus 72 ------~~~~~F~Ftn~~~a~~erd~VKd~L~~~l~~~ 103 (108)
T 1pfj_A 72 ------GDTTNFHFSNESTAVKERDAVKDLLQQLLPKF 103 (108)
T ss_dssp ------SCEEEEECCCSSCTTHHHHHHHHHHHHHHHHH
T ss_pred ------CCceEEEEcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 244677787742 2445556777766543
No 79
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=67.91 E-value=58 Score=27.92 Aligned_cols=150 Identities=13% Similarity=0.164 Sum_probs=84.0
Q ss_pred eeeeeeeecCHHHHHHHhcCCCCchHHHHHH-HcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEE
Q 009741 338 GIYNDVFPCTAEQFFTLLFSDDSKFTNEYRA-ARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHA 416 (527)
Q Consensus 338 ~~~~~~~~~s~~~~f~~lf~d~s~f~~~~~~-~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~ 416 (527)
...+.+.++|++++|.++-.|-...+.+++- .....++.-+.|. .+..|.++|. + |..... -++++
T Consensus 5 ~~~e~~i~ap~~~vw~~~~~d~~~~~pk~~P~~i~s~~~~eGdgg-----~Gsvr~~~~~-~-----G~~~~~--~kErl 71 (159)
T 1e09_A 5 YESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGG-----PGTIKKITFG-E-----GSQYGY--VKHKI 71 (159)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSS-----TTCEEEEEEC-C-----SSSCEE--EEEEE
T ss_pred EEEEEEecCCHHHHHHHHhcCccccchhhChhhccEEEEEeCCCC-----CceEEEEEec-C-----CCCceE--EEEEE
Confidence 3456789999999999985321223444442 3344445556662 2577988885 2 322122 34455
Q ss_pred E-EcCCCCeEEEEEeeeeCCCCCCC-eEEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHHHH
Q 009741 417 V-LSPDKKIFVFETVQQAHDVPFGS-YFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVE 494 (527)
Q Consensus 417 ~-~~~~~~~~vi~~~~~~~dvPygd-~F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~ 494 (527)
. ..+++..|..... .+=+..+ .=+....|.+.+.++++|.++.. ++|.+.. -..+.-..++..++.+.
T Consensus 72 ~~~D~~~~~~~y~ii---eG~~~~~~~~~~~~~~~v~~~~~~gs~v~wt-----~~y~~~~--~~~~~~~~~~~~~~~~~ 141 (159)
T 1e09_A 72 DSIDKENYSYSYTLI---EGDALGDTLEKISYETKLVASPSGGSIIKST-----SHYHTKG--NVEIKEEHVKAGKEKAS 141 (159)
T ss_dssp EEEETTTTEEEEEEC---CCTTTGGGEEEEEEEEEECCCTTSSEEEEEE-----EEEEECS--SCCCCHHHHHHHHHHHH
T ss_pred EEEcCCCCEEEEEEE---ecccCcccceEEEEEEEEEecCCCCEEEEEE-----EEEEECC--CCCCCHHHHHHHHHHHH
Confidence 5 3344444443322 2212222 22445667777776667877666 4454421 11122223345578889
Q ss_pred HHHHHHHHHHhhcCCC
Q 009741 495 LMLETARSYIKICTSG 510 (527)
Q Consensus 495 ~~~~~~~~~l~~~~~~ 510 (527)
.+++.++++|-.+.+.
T Consensus 142 ~~~k~ie~yll~~~~~ 157 (159)
T 1e09_A 142 NLFKLIETYLKGHPDA 157 (159)
T ss_dssp HHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHhChhh
Confidence 9999999999887543
No 80
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=62.64 E-value=79 Score=28.47 Aligned_cols=147 Identities=10% Similarity=0.094 Sum_probs=79.4
Q ss_pred eeeeeeeecCHHHHHHHhcC-CCCchHHHHHH-HcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEE
Q 009741 338 GIYNDVFPCTAEQFFTLLFS-DDSKFTNEYRA-ARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQH 415 (527)
Q Consensus 338 ~~~~~~~~~s~~~~f~~lf~-d~s~f~~~~~~-~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~ 415 (527)
...+.++++|++++|.++.+ |-..++.+.+- .....++. ++|. .+..|.++|. . |+.... .+++
T Consensus 31 ~~~eveI~apa~kvW~~~v~~df~~l~pk~~P~~i~s~e~~-GdGg-----~GsIR~lt~~---~---G~~~~~--vkEr 96 (201)
T 2vq5_A 31 IHHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEII-GDGG-----VGTILDMTFV---P---GEFPHE--YKEK 96 (201)
T ss_dssp EEEEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEEE-SSSS-----TTCEEEEECC---T---TCSSCE--EEEE
T ss_pred EEEEEEecCCHHHHHhhhhcCCcccchhhhCcccceEEEEe-cCCC-----CCeEEEEEec---C---CCcccE--EEEE
Confidence 34567889999999999876 54455555553 34555666 7763 2577988875 1 321112 2344
Q ss_pred EE-EcCCCCeEEEEEeeee-CCCCCCCeEEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHHH
Q 009741 416 AV-LSPDKKIFVFETVQQA-HDVPFGSYFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEV 493 (527)
Q Consensus 416 ~~-~~~~~~~~vi~~~~~~-~dvPygd~F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~~ 493 (527)
+. ..+++..|.....--. ...||. +|. ....+.+.++++|.++.. ++|.+..-. .+-..-...++.+
T Consensus 97 le~iDde~~~~sYsiieGd~l~~~~~-~y~--~tikv~p~~dggs~vkWt-----~~ye~~~~~---~~~~e~~~~~~~~ 165 (201)
T 2vq5_A 97 FILVDNEHRLKKVQMIEGGYLDLGVT-YYM--DTIHVVPTGKDSCVIKSS-----TEYHVKPEF---VKIVEPLITTGPL 165 (201)
T ss_dssp EEEEETTTTEEEEEEEEEGGGGTTEE-EEE--EEEEEEEEETTEEEEEEE-----EEEEECGGG---HHHHTTTCCSHHH
T ss_pred EEEEchhhCEEEEEEEecCcccccee-EEE--EEEEEEECCCCCeEEEEE-----EEEEECCCC---CCCChhHHHHHHH
Confidence 44 3344444444333211 112332 333 344455666677875554 455441110 0000011336678
Q ss_pred HHHHHHHHHHHhhcCC
Q 009741 494 ELMLETARSYIKICTS 509 (527)
Q Consensus 494 ~~~~~~~~~~l~~~~~ 509 (527)
..+++.++++|-++.+
T Consensus 166 ~~~~KaiE~yLlanp~ 181 (201)
T 2vq5_A 166 AAMADAISKLVLEHKS 181 (201)
T ss_dssp HHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHhCcc
Confidence 8888889999887764
No 81
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=60.91 E-value=52 Score=37.58 Aligned_cols=87 Identities=16% Similarity=0.226 Sum_probs=57.3
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----EEEeeeecCCCCCeeccEEEEEe--cC--CCcEEEEEEEEc
Q 009741 14 YLIKLELLAAKNLIGANLNGTSDPYAIITC--GSE----KRFSSMVPGSRYPMWGEEFNFSV--DE--LPVQIIVTIYDW 83 (527)
Q Consensus 14 g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~--~~~----~~~T~~~~~t~nP~W~e~f~f~v--~~--~~~~L~~~V~d~ 83 (527)
..+.|+|+.+.++.. +.....+-||.+.+ |++ ...|..+. ..+|.|||...|++ .+ ...+|.|+||+.
T Consensus 355 ~~f~v~i~~~~~~n~-~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 355 SALRIKILCATYVNV-NIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp SEEEEEEEEESCCCC-CCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCEEEEEEEecCCCC-CccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 467899999988753 33334667888765 322 23444443 45788999999986 33 356799999986
Q ss_pred CCC----CCCceeEEEEEEcccC
Q 009741 84 DII----WKSTVLGSVIVTVESE 102 (527)
Q Consensus 84 d~~----~~d~~iG~~~i~l~~l 102 (527)
... ..+..||-+.++|-+.
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCC-------CCEEEEEESBCT
T ss_pred cCccCcccccceeEEeeeeeEcc
Confidence 542 1235788888888765
No 82
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=58.74 E-value=91 Score=27.04 Aligned_cols=149 Identities=11% Similarity=0.068 Sum_probs=78.4
Q ss_pred ceeeeeeeecCHHHHHHHhcCCCCchHHHHHH-HcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEE
Q 009741 337 VGIYNDVFPCTAEQFFTLLFSDDSKFTNEYRA-ARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQH 415 (527)
Q Consensus 337 ~~~~~~~~~~s~~~~f~~lf~d~s~f~~~~~~-~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~ 415 (527)
....+.+.++|++++|.++..|-...+.+.+- .....++..+. ...+..|.++|. .-||. . ..+++
T Consensus 11 ~~~~ev~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGd-----g~~Gsir~~~~~-----~g~~~-~--~~kEr 77 (165)
T 3ie5_A 11 TIVKEEESPIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGD-----GGVGTVTKITFV-----DGHPL-T--YMLHK 77 (165)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESS-----SSTTCEEEEEEC-----TTSSC-C--EEEEE
T ss_pred EEEEEEEecCCHHHHHHHhcCCccccchhhCCcccceEEEecCC-----CCCCeEEEEEec-----CCCCC-c--eEEEE
Confidence 44566789999999999986542222233331 22223333343 113678999883 12342 1 23455
Q ss_pred EEE-cCCCCeEEEEEeeeeCCCC--CCCeEEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHH
Q 009741 416 AVL-SPDKKIFVFETVQQAHDVP--FGSYFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKE 492 (527)
Q Consensus 416 ~~~-~~~~~~~vi~~~~~~~dvP--ygd~F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~ 492 (527)
+.. .+++..|.....- -+++ .-.+|....+.. .++++|.++.. ++|.+-. -..+.-..++..++.
T Consensus 78 l~~iD~~~~~~~Y~iie--G~~l~~~~~~y~~~i~v~---~~~ggs~vkwt-----~~y~~~~--~~~~~~e~~k~~~~~ 145 (165)
T 3ie5_A 78 FDEIDAANFYCKYTLFE--GDVLRDNIEKVVYEVKLE---AVGGGSKGKIT-----VTYHPKP--GCTVNEEEVKIGEKK 145 (165)
T ss_dssp EEEEEGGGTEEEEEEEE--EGGGTTTEEEEEEEEEEE---EETTEEEEEEE-----EEEEECT--TCCCCHHHHHHHHHH
T ss_pred EEEEchhcCEEEEEEec--CCCCccceEEEEEEEEEE---eCCCceEEEEE-----EEEEECC--CCCCCHHHHHHHHHH
Confidence 543 2333343332221 2222 123455555544 45667876655 4444411 112223334456788
Q ss_pred HHHHHHHHHHHHhhcCCC
Q 009741 493 VELMLETARSYIKICTSG 510 (527)
Q Consensus 493 ~~~~~~~~~~~l~~~~~~ 510 (527)
...+++.++.+|-++.+.
T Consensus 146 ~~~~~K~ie~yllanp~~ 163 (165)
T 3ie5_A 146 AYEFYKQVEEYLAANPEV 163 (165)
T ss_dssp HHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHhChhh
Confidence 888999999999877654
No 83
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=56.90 E-value=92 Score=26.54 Aligned_cols=144 Identities=13% Similarity=0.186 Sum_probs=75.8
Q ss_pred eeeeeeeecCHHHHHHHhcCCCCchHHHHHH-HcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEE
Q 009741 338 GIYNDVFPCTAEQFFTLLFSDDSKFTNEYRA-ARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHA 416 (527)
Q Consensus 338 ~~~~~~~~~s~~~~f~~lf~d~s~f~~~~~~-~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~ 416 (527)
...+.+.++|++++|.++..|-..++.+++- .....++..+.|. .+..|.++|.- -.+| .. ..+++
T Consensus 5 ~~~e~~i~a~a~kvw~~~v~d~~~l~pk~~P~~i~s~~~~eGdgg-----~Gsvr~~~~~~----g~~~--~~--~kErl 71 (155)
T 2flh_A 5 FNTQTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDGG-----VGTILIFNFLP----EVSP--SY--QREEI 71 (155)
T ss_dssp EEEEEEESSCHHHHHHHHHTSCTTHHHHHCTTTEEEEEEEECSSS-----TTCEEEEEECT----TSSS--CE--EEEEE
T ss_pred EEEEEEecCCHHHHHHHHhcccccccchhccccceEEEEEcCCCC-----CCeEEEEEeeC----CCCC--cE--EEEEE
Confidence 3456789999999999987754555455542 3233344456552 36789888751 0123 22 23444
Q ss_pred E-EcCCCCeEEEEEeeee-CCCCCCCeEEEEEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHH--HH
Q 009741 417 V-LSPDKKIFVFETVQQA-HDVPFGSYFEIHGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYK--KE 492 (527)
Q Consensus 417 ~-~~~~~~~~vi~~~~~~-~dvPygd~F~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~--~~ 492 (527)
. +.+++..|.....--. ...||.+ |. ..+.+.+.++++|.++.. ++|.+..-. .+ -.+..+ +.
T Consensus 72 ~~iD~~~~~~~y~iieg~~l~~~~~~-~~--~~i~v~p~~~ggs~v~wt-----~~y~~~~~~--~~---~~~~~~~~~~ 138 (155)
T 2flh_A 72 TEFDESSHEIGLQVIEGGYLSQGLSY-YK--TTFKLSEIEEDKTLVNVK-----ISYDHDSDI--EE---KVTPTKTSQS 138 (155)
T ss_dssp EEEETTTTEEEEEEEEEGGGGTTCSE-EE--EEEEEEEEETTEEEEEEE-----EEEEC------------CCHHHHHHH
T ss_pred EEEeCCCCEEEEEEEeccccccCceE-EE--EEEEEEECCCCCEEEEEE-----EEEEECCCC--cc---ChhHhhhHHH
Confidence 4 3344444443333221 1224543 33 445556666677866655 455552210 01 223445 67
Q ss_pred HHHHHHHHHHHHhhc
Q 009741 493 VELMLETARSYIKIC 507 (527)
Q Consensus 493 ~~~~~~~~~~~l~~~ 507 (527)
+..+++.++.+|-.+
T Consensus 139 ~~~~~k~ie~yll~~ 153 (155)
T 2flh_A 139 TLMYLRRLERYLSNG 153 (155)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHhhC
Confidence 788888888887543
No 84
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=56.36 E-value=98 Score=26.70 Aligned_cols=145 Identities=10% Similarity=0.133 Sum_probs=79.4
Q ss_pred ceeeeeeeecCHHHHHHHhcCCCCchHHHHH-HHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEE
Q 009741 337 VGIYNDVFPCTAEQFFTLLFSDDSKFTNEYR-AARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQH 415 (527)
Q Consensus 337 ~~~~~~~~~~s~~~~f~~lf~d~s~f~~~~~-~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~ 415 (527)
+...+.++++|++++|.++-+|... +.+++ ......++.-+.|.. .+..|.++|.. |.+.. .-+++
T Consensus 18 k~~~ev~i~apa~kvw~~~~~d~~~-lpk~~P~~i~s~~~~eGd~gg----~Gsir~~~~~~------gg~~~--~~kEr 84 (166)
T 2i9y_A 18 KLETDVEIKASADKFHHMFAGKPHH-VSKASPGNIQGCDLHEGDWGT----VGSIVFWNYVH------DGEAK--VAKER 84 (166)
T ss_dssp EEEEEEEESSCHHHHHGGGSSCSSC-CCCSCSSCCSSCCCCSCCSCS----TTCCCEEEEEE------TTEEE--EEEEE
T ss_pred EEEEEEEecCCHHHHHHHHhccccc-ccccccccceEEEEEcCCCCC----CCeEEEEEEec------CCCce--EEEEE
Confidence 4566778999999999998775322 22333 134444555566632 35678888863 22222 23445
Q ss_pred EE-EcCCCCeEEEEEeeeeCCCCCCCeEEEEEEEEEEeecC-CceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHHH
Q 009741 416 AV-LSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAE-NSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEV 493 (527)
Q Consensus 416 ~~-~~~~~~~~vi~~~~~~~dvPygd~F~v~~r~~i~~~~~-~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~~ 493 (527)
+. +.+++..|..... --++ ...+=+....|.+.+.++ ++|.+... ++|.+..- .+.. -+...+.+
T Consensus 85 l~~iD~~~~~~~y~ii--eGd~-~~~~~~~~~ti~v~p~~~g~gs~v~wt-----~~ye~~~~---~~~~--p~~~~~~~ 151 (166)
T 2i9y_A 85 IEAVEPDKNLITFRVI--EGDL-MKEYKSFLLTIQVTPKPGGPGSIVHWH-----LEYEKISE---EVAH--PETLLQFC 151 (166)
T ss_dssp EEEEETTTTEEEEEEC--CTTG-GGTEEEEEEEEEEEEEEETTEEEEEEE-----EEEEESST---TTCC--THHHHHHH
T ss_pred EEEEeccCcEEEEEEE--eCCC-CCCeeEEEEEEEEEECCCCCCcEEEEE-----EEEEECCC---CCCC--HHHHHHHH
Confidence 54 3444444443322 1233 122335566777777643 46776655 45544110 0111 13456778
Q ss_pred HHHHHHHHHHHhhc
Q 009741 494 ELMLETARSYIKIC 507 (527)
Q Consensus 494 ~~~~~~~~~~l~~~ 507 (527)
..+++.+.++|.++
T Consensus 152 ~~~~k~ie~~l~~~ 165 (166)
T 2i9y_A 152 VEVSKEIDEHLLAE 165 (166)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhhC
Confidence 88888888887654
No 85
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=54.28 E-value=1e+02 Score=34.79 Aligned_cols=88 Identities=14% Similarity=0.120 Sum_probs=52.7
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCeE---EEeeeecCCCCCeeccEEEEEe--cC--CCcEEEEEEEEcC
Q 009741 14 YLIKLELLAAKNLIGANLNGTSDPYAIITC--GSEK---RFSSMVPGSRYPMWGEEFNFSV--DE--LPVQIIVTIYDWD 84 (527)
Q Consensus 14 g~L~V~vi~A~~L~~~d~~g~~dPyv~v~~--~~~~---~~T~~~~~t~nP~W~e~f~f~v--~~--~~~~L~~~V~d~d 84 (527)
..+.|.|+.+....... ....+-||.+.+ |... .+|..+.-+.+|.|||.+.|++ .+ ....|.|+||+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 45778888876422111 224567777653 4432 2455555567899999999885 33 3567999999864
Q ss_pred CCC----------------CCceeEEEEEEcccC
Q 009741 85 IIW----------------KSTVLGSVIVTVESE 102 (527)
Q Consensus 85 ~~~----------------~d~~iG~~~i~l~~l 102 (527)
..+ +...+|-+.++|-+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp C--------------------CEEEEEEEESBCT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecC
Confidence 321 234677777776554
No 86
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=49.85 E-value=43 Score=31.52 Aligned_cols=118 Identities=8% Similarity=-0.113 Sum_probs=61.8
Q ss_pred eeeeeeecCHHHHHHHhcCCCCchHHHHHHHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEEEE
Q 009741 339 IYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAVL 418 (527)
Q Consensus 339 ~~~~~~~~s~~~~f~~lf~d~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~~ 418 (527)
-+..+.+++++++|+++.. ..... .+|-.+..++.-+..+...-.+.+..|. +.+|-+.+=....+...
T Consensus 91 k~~~~v~~~~~~v~~~L~D--~~~R~-------~WD~~~~~~~vle~id~~~ivY~~~~p~--~~~~v~~RDFV~lr~~r 159 (258)
T 3fo5_A 91 HMEMVVHVDAAQAFLLLSD--LRQRP-------EWDKHYRSVELVQQVDEDDAIYHVTSPA--LGGHTKPQDFVILASRR 159 (258)
T ss_dssp EEEEEESSCHHHHHHHHHC--GGGGG-------GTCTTCCEEEEEEEEETTEEEEEEEECC--CTTCSSCEEEEEEEEEE
T ss_pred EEEEEEeCCHHHHHHHHhC--chhHh-------HhhhhccEEEEEEEcCCCeEEEEEecCC--ccCCCCCCEEEEEEEEE
Confidence 4567889999999999983 22211 1121111222111000111112223332 21332223222233322
Q ss_pred --cCCCC-eEEEEEeeeeCCCCCCCe----EEEEEEEEEEeecCCceEEEEEEeeeeEE
Q 009741 419 --SPDKK-IFVFETVQQAHDVPFGSY----FEIHGRWHLETIAENSSTIDIKVVSAGAH 470 (527)
Q Consensus 419 --~~~~~-~~vi~~~~~~~dvPygd~----F~v~~r~~i~~~~~~~~~l~v~~~~~~V~ 470 (527)
..++. +++....+.-+.+|-..- ....+.|+|.+.++++|+|.-. .++.
T Consensus 160 ~~~~~G~~yvi~~~SV~hp~~Pp~~g~VR~~~~~sg~~I~P~~~~~t~VtY~---~q~d 215 (258)
T 3fo5_A 160 KPCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQLTKVSYY---NQAT 215 (258)
T ss_dssp CCSSTTCCEEEEEEEEECTTSCCCTTSEECCCSSEEEEEEEEETTEEEEEEE---ESCC
T ss_pred eccCCCCEEEEEEEeccCCCCCCCCCCEEEEEcCcEEEEEECCCCCEEEEEE---EeeC
Confidence 23454 444455566677886554 4567999999999999998887 6654
No 87
>2l9p_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Staphylococcus epidermidis}
Probab=42.46 E-value=1.5e+02 Score=25.05 Aligned_cols=112 Identities=8% Similarity=0.081 Sum_probs=55.0
Q ss_pred ceeeeeeeecCHHHHHHHhcCCCCchHHHHHHHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEE
Q 009741 337 VGIYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHA 416 (527)
Q Consensus 337 ~~~~~~~~~~s~~~~f~~lf~d~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~ 416 (527)
...++.+|+.|++++|.++-. ...+..+. +...+...........|+. +.|... .+-|. .. ..-++
T Consensus 9 ~i~~~~~i~Ap~e~Vw~a~td--pe~~~~W~---~p~~~~~~~~~~d~~~Gg~---~~~~~~--~~~G~---~~-~~g~v 74 (164)
T 2l9p_A 9 KIIFTRTFSAPINKVFDAYTK--RELFEQWF---HPQDASVTVYDFNATKGGS---AFYAIQ--APQMI---SY-TIAEY 74 (164)
T ss_dssp EEEECCEESSCHHHHHHHHHC--HHHHTTTC---CCTTCEEEEEECCCSTTEE---EEEEEE--ETTEE---EE-EEEEE
T ss_pred eEEEEEEeCCCHHHHHHHhCC--HHHHHhcc---CCCCceeeEEEEeccCCCE---EEEEEE--CCCCC---EE-EEEEE
Confidence 467789999999999999865 32232221 1111211111111112332 333321 11122 22 22233
Q ss_pred EEcCCCCeEEEEEeeeeC-CCCCCCeEEEEEEEEEEeecCCceEEEEE
Q 009741 417 VLSPDKKIFVFETVQQAH-DVPFGSYFEIHGRWHLETIAENSSTIDIK 463 (527)
Q Consensus 417 ~~~~~~~~~vi~~~~~~~-dvPygd~F~v~~r~~i~~~~~~~~~l~v~ 463 (527)
......+.+++....... +.|-++-......|.|+..+ ++|+|.+.
T Consensus 75 ~e~~p~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~-~gT~l~~~ 121 (164)
T 2l9p_A 75 LQVDAPYYIEYLDYFATSKGEKDTSMPGMHITLNFEEVK-GKTTVTST 121 (164)
T ss_dssp SCCBTTTEEEEEEEEEBTTBSCCSSSCCEEEEEEECCCS-SSEEEEEE
T ss_pred EEEcCCCEEEEEEEecCCCCCccCCCCceEEEEEEEECC-CCEEEEEE
Confidence 322334677777665432 24432212256677888764 57888887
No 88
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=41.00 E-value=60 Score=28.03 Aligned_cols=90 Identities=10% Similarity=0.062 Sum_probs=58.9
Q ss_pred CCceEEEEEEEEeecCCCCC-CCCCCCcEEEEEEC---CeEEEeeeecCCCCCeeccEEEEEecCC--------CcEEEE
Q 009741 11 NSAYLIKLELLAAKNLIGAN-LNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDEL--------PVQIIV 78 (527)
Q Consensus 11 ~~~g~L~V~vi~A~~L~~~d-~~g~~dPyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~v~~~--------~~~L~~ 78 (527)
+....+.|.|.++.--+..- ..+-.+|..-+..+ -+.+.|.++. +.+|.+|-+-.+.+... ...|.+
T Consensus 15 ~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 56788999998876211110 02234666555543 3444555555 78999998877776421 234889
Q ss_pred EEEEcCCCCCCceeEEEEEEcccC
Q 009741 79 TIYDWDIIWKSTVLGSVIVTVESE 102 (527)
Q Consensus 79 ~V~d~d~~~~d~~iG~~~i~l~~l 102 (527)
+++.... +.-+.||.+.|+|..+
T Consensus 94 ELhqa~g-~~~~tla~~~I~l~~l 116 (156)
T 2yrb_A 94 EVHQAYS-TEYETIAACQLKFHEI 116 (156)
T ss_dssp EEEEECS-SCEEEEEEEEECCSHH
T ss_pred EEEEeeC-CCceEEEEEEEEhHHh
Confidence 9988653 3557899999999988
No 89
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=36.15 E-value=40 Score=38.65 Aligned_cols=69 Identities=17% Similarity=0.272 Sum_probs=46.6
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEE--ECCeE----EEeeeecCCCCCeeccEEEEEe--cC--CCcEEEEEEEE
Q 009741 13 AYLIKLELLAAKNLIGANLNGTSDPYAIIT--CGSEK----RFSSMVPGSRYPMWGEEFNFSV--DE--LPVQIIVTIYD 82 (527)
Q Consensus 13 ~g~L~V~vi~A~~L~~~d~~g~~dPyv~v~--~~~~~----~~T~~~~~t~nP~W~e~f~f~v--~~--~~~~L~~~V~d 82 (527)
...+.|+|..+.++... ...+-||.+. .|++. ..|..+.-..+|.|||.+.|++ .+ ....|.|+||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 35688999999888643 3456666644 34432 2355555567899999999985 33 25569999998
Q ss_pred cC
Q 009741 83 WD 84 (527)
Q Consensus 83 ~d 84 (527)
..
T Consensus 429 ~~ 430 (1092)
T 2y3a_A 429 VL 430 (1092)
T ss_dssp C-
T ss_pred ec
Confidence 63
No 90
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=30.69 E-value=2e+02 Score=22.73 Aligned_cols=57 Identities=11% Similarity=0.146 Sum_probs=34.2
Q ss_pred EEEEEEEeecCCceEEEEEEeeeeEEEeecceeeeeeehhhHHHHHHHHHHHHHHHHHHHhh
Q 009741 445 HGRWHLETIAENSSTIDIKVVSAGAHFKKWCVIQFKIKTGAVNKYKKEVELMLETARSYIKI 506 (527)
Q Consensus 445 ~~r~~i~~~~~~~~~l~v~~~~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~~~~~~l~~ 506 (527)
...|.|++.+++ |+|... ...++.. .++..++..-...-..+.++.+++.+++.+..
T Consensus 88 ~~~~~~~~~~~g-T~v~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~lk~~~e~ 144 (147)
T 2d4r_A 88 EGTWVFLPEGEG-TRVVLT---LTYELTI-PIFGGLLRKLVQKLMQENVESLLKGLEERVLA 144 (147)
T ss_dssp EEEEEEEECSSS-EEEEEE---EEEECCC-TTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEECCCC-cEEEEE---EEEecCC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 568999998776 888877 6665532 23333443333334455666666666666554
No 91
>1zyi_A Methylosome subunit picln; PH domain, cell volume regulation, RNA splicing, translation; NMR {Canis lupus familiaris}
Probab=30.54 E-value=1.2e+02 Score=26.55 Aligned_cols=59 Identities=12% Similarity=0.269 Sum_probs=41.0
Q ss_pred EEEeeeeccccceeEEeecceEEEEeccCCceeEEEEecccce--eeeecccccccCcEEEEEe
Q 009741 181 YSCVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDID--EIQRSQHAFINPAITIILR 242 (527)
Q Consensus 181 f~c~l~~~~~~~Gr~yis~~~~cF~s~~~g~~~~~~i~~~~i~--~i~k~~~~~~~~~i~i~~~ 242 (527)
..+.+...-+-.|.|||+.+.+.|.+. ...-+.||+..|. .|.+...++-.+.|.+.+.
T Consensus 32 v~~vl~~~~~g~GtLyVt~~~l~W~~~---~~~G~sI~YpsIsLHAIsrd~~~~p~~clY~Qld 92 (171)
T 1zyi_A 32 TEAVLNGKGLGTGTLYIAESRLSWLDG---SGLGFSLEYPTISLHAVSRDLNAYPREHLYVMVN 92 (171)
T ss_dssp EEEEBTTBCCCEEEEEEETTEEEEEET---TTEEEEESSCCCSEEECCSSCSSCCSCCEEEEEE
T ss_pred EEEEECCCccCceEEEEEcCEEEEEcC---CCcEEEeecCeEEEEEEecCCCCCCCceEEEEEe
Confidence 344555555567999999999999987 3588999999984 4555544333356766654
No 92
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=30.16 E-value=11 Score=39.85 Aligned_cols=40 Identities=18% Similarity=0.317 Sum_probs=0.0
Q ss_pred ceeEEeecceEEEEeccCCceeEEEEecccceeeeecccc
Q 009741 192 HGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHA 231 (527)
Q Consensus 192 ~Gr~yis~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~ 231 (527)
+|++|+|.++|||--..-.....+.|+|++|..++...+.
T Consensus 44 ~G~~yLTShRiiyvD~~~p~~~s~~l~L~~I~~~e~~agf 83 (566)
T 1w7p_D 44 RGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGF 83 (566)
T ss_dssp ----------------------------------------
T ss_pred CceEEEEeeeEEEecCCCCcceEEEEEhHHcceeeeeecc
Confidence 6999999999999766555567899999999999987654
No 93
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=28.88 E-value=54 Score=27.26 Aligned_cols=26 Identities=12% Similarity=0.396 Sum_probs=20.4
Q ss_pred EEEEEEEEEeecCCceEEEEEEeeeeEEEe
Q 009741 443 EIHGRWHLETIAENSSTIDIKVVSAGAHFK 472 (527)
Q Consensus 443 ~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~ 472 (527)
....+|.|++.+++ |+|... ..++|.
T Consensus 90 ~~~g~w~f~~~~~g-t~v~~~---~~~~~~ 115 (148)
T 1t17_A 90 RLNNGWRFMPEGDA-TRVEFV---IEFAFK 115 (148)
T ss_dssp CEEEEEEEEEETTE-EEEEEE---EEECCS
T ss_pred ccEEEEEEEECCCC-eEEEEE---EEEEEC
Confidence 35899999998776 888887 666664
No 94
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=21.02 E-value=3.2e+02 Score=23.06 Aligned_cols=108 Identities=9% Similarity=0.163 Sum_probs=54.7
Q ss_pred eeeeecCHHHHHHHhcCCCCchHHHHHHHcCCcceEeccceecCCCCCeEEEEEEEEecCCCCCCcceeEeEEEEEEEcC
Q 009741 341 NDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAVLSP 420 (527)
Q Consensus 341 ~~~~~~s~~~~f~~lf~d~s~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~~~~ 420 (527)
..+.+.|++++|+++=+ -.-|.+|+-.+....+. ... +...| +...... ++. .-.-+-.+...+
T Consensus 10 si~I~ap~~~V~~~v~D--~~~~p~~~P~~~~~~v~-----~~~--~~~~~-~~~~~~~----~G~--~~~~~s~~~~~~ 73 (172)
T 3tfz_A 10 TVTVAAPADLVWEVLAD--VLGYADIFPPTEKVEIL-----EEG--QGYQV-VRLHVDV----AGE--INTWTSRRDLDP 73 (172)
T ss_dssp EEEESSCHHHHHHHHHC--GGGHHHHCSSEEEEEEE-----EEE--TTEEE-EEEEEEE----TTE--EEEEEEEEEEET
T ss_pred EEEeCCCHHHHHHHHHh--HHHHHhhCcccceEEEE-----ecC--CCEEE-EEEEEec----CCE--EEEEEEEEEEeC
Confidence 45889999999999853 23345543222111111 111 11211 2233221 221 111111222334
Q ss_pred CCCeEEEEEeeeeCCCCCCCeE-EEEEEEEEEeecCCceEEEEEEeeeeEEEee
Q 009741 421 DKKIFVFETVQQAHDVPFGSYF-EIHGRWHLETIAENSSTIDIKVVSAGAHFKK 473 (527)
Q Consensus 421 ~~~~~vi~~~~~~~dvPygd~F-~v~~r~~i~~~~~~~~~l~v~~~~~~V~f~K 473 (527)
.+..+.+.... .+ .-| ....+|.+.+.++++|+|... ...+|..
T Consensus 74 ~~~~i~~~~~~--~~----gpf~~~~g~w~f~~~~~~~t~V~~~---~~~~~~~ 118 (172)
T 3tfz_A 74 ARRVIAYRQLE--TA----PIVGHMSGEWRAFTLDAERTQLVLT---HDFVTRA 118 (172)
T ss_dssp TTTEEEEEEEE--CC----TTEEEEEEEEEEEEEETTEEEEEEE---EEEEECC
T ss_pred CCCEEEEEEee--CC----CChhhcEEEEEEEECCCCcEEEEEE---EEEEEcC
Confidence 34455554432 22 234 456799999998889998888 7777654
Done!